BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (273 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P76241 Uncharacterized HTH-type transcriptional regulat... 567 e-160 UniRef50_A4JQ17 Transcriptional regulator, AraC family n=56 Tax=... 276 6e-73 UniRef50_B5RKL9 Transcriptional regulator, AraC family n=2 Tax=c... 264 3e-69 UniRef50_C5CZV0 Transcriptional regulator, AraC family n=1 Tax=V... 246 5e-64 UniRef50_B8J3U2 Transcriptional regulator, AraC family n=2 Tax=P... 231 2e-59 UniRef50_Q1ZT94 Putative transcriptional regulator n=3 Tax=Photo... 226 7e-58 UniRef50_Q15UL1 Transcriptional regulator, AraC family n=3 Tax=A... 225 1e-57 UniRef50_Q216D2 Transcriptional regulator, AraC family n=7 Tax=B... 224 4e-57 UniRef50_Q7D2T6 Transcriptional regulator, AraC family n=7 Tax=P... 218 1e-55 UniRef50_A9FA95 Transcriptional regulator, AraC family n=2 Tax=P... 215 1e-54 UniRef50_A6W3J4 Helix-turn-helix-domain containing protein AraC ... 215 2e-54 UniRef50_C5AN13 Helix-turn-helix-domain containing protein AraC ... 210 4e-53 UniRef50_Q0B1C2 Transcriptional regulator, AraC family n=5 Tax=P... 210 5e-53 UniRef50_D1RWK8 Transcriptional regulatory protein n=2 Tax=Gamma... 209 6e-53 UniRef50_A8G9B2 Transcriptional regulator, AraC family n=4 Tax=c... 209 9e-53 UniRef50_Q4K9E0 Transcriptional regulator, AraC family n=1 Tax=P... 207 3e-52 UniRef50_D2M677 Transcriptional regulator, AraC family n=1 Tax=R... 206 5e-52 UniRef50_A8I0S5 Transcriptional regulator n=1 Tax=Azorhizobium c... 199 9e-50 UniRef50_B4SJK4 Transcriptional regulator, AraC family n=4 Tax=P... 190 5e-47 UniRef50_Q2NTH9 Putative transcriptional regulator n=1 Tax=Sodal... 189 7e-47 UniRef50_Q2BLH8 Transcriptional Regulator, AraC family protein n... 167 4e-40 UniRef50_A5GBQ3 Transcriptional regulator, AraC family n=2 Tax=B... 164 4e-39 UniRef50_B3QB90 Transcriptional regulator, AraC family n=3 Tax=A... 152 1e-35 UniRef50_D1SXH7 Transcriptional regulator, AraC family n=1 Tax=A... 152 2e-35 UniRef50_B0TZR0 Transcriptional regulator, AraC family n=1 Tax=F... 150 4e-35 UniRef50_B4SSQ8 Transcriptional regulator, AraC family n=3 Tax=S... 148 2e-34 UniRef50_B6JB31 Transcriptional regulator, AraC-family n=5 Tax=P... 147 4e-34 UniRef50_D0J513 Pyridoxamine 5'-phosphate oxidase-related protei... 147 5e-34 UniRef50_Q2F9R4 AraC-type DNA-binding domain-containing protein ... 146 6e-34 UniRef50_B0UH11 Transcriptional regulator, AraC family n=3 Tax=R... 146 8e-34 UniRef50_Q4ZYQ3 Helix-turn-helix, AraC type:Arac protein, arabin... 145 2e-33 UniRef50_A1TK09 Transcriptional regulator, AraC family n=4 Tax=P... 144 4e-33 UniRef50_A5FCF5 Transcriptional regulator, AraC family n=1 Tax=F... 142 8e-33 UniRef50_Q4K6D5 Transcriptional regulator, AraC family n=8 Tax=P... 142 1e-32 UniRef50_D0B292 Transcriptional regulator n=40 Tax=Rhizobiales R... 142 1e-32 UniRef50_Q7D3B7 Transcriptional regulator. AraC family n=2 Tax=A... 142 1e-32 UniRef50_A0AX10 Transcriptional regulator, AraC family n=6 Tax=B... 142 1e-32 UniRef50_C1DH76 Transcriptional regulator, AraC-family n=3 Tax=P... 142 2e-32 UniRef50_Q2SP75 AraC-type DNA-binding domain-containing protein ... 141 2e-32 UniRef50_Q7W072 Probable transcriptional regulator n=3 Tax=Borde... 140 3e-32 UniRef50_D1XHM7 Transcriptional regulator, AraC family n=1 Tax=S... 140 5e-32 UniRef50_B7UVC2 Probable transcriptional regulator n=6 Tax=Pseud... 140 5e-32 UniRef50_Q39NN6 Transcriptional regulator, AraC family n=9 Tax=B... 140 5e-32 UniRef50_A0NPK3 Probable transcriptional regulator protein, AraC... 140 6e-32 UniRef50_B3RAF2 Putative Transcriptional Regulator, AraC family ... 139 1e-31 UniRef50_Q39GD4 Transcriptional regulator, AraC family n=7 Tax=B... 139 1e-31 UniRef50_Q2K0F2 Probable transcriptional regulator protein, AraC... 139 1e-31 UniRef50_Q13ID0 Transcriptional regulator, AraC family n=1 Tax=B... 138 2e-31 UniRef50_D0J7G0 Transcriptional regulator, AraC family n=11 Tax=... 138 2e-31 UniRef50_A7K1S8 Transcriptional regulator AraC family protein n=... 138 2e-31 UniRef50_A4WDQ0 Transcriptional regulator, AraC family n=18 Tax=... 137 3e-31 UniRef50_Q11DK3 Transcriptional regulator, AraC family n=1 Tax=C... 137 3e-31 UniRef50_Q8L1B2 Transcriptional factor PhcT (Fragment) n=1 Tax=C... 137 3e-31 UniRef50_Q2BIT2 Transcriptional regulator, AraC family protein n... 137 5e-31 UniRef50_Q221Z0 Transcriptional regulator, AraC family n=9 Tax=P... 137 5e-31 UniRef50_Q2RRF5 Transcriptional regulator, AraC family n=2 Tax=A... 136 8e-31 UniRef50_B0RW44 Transcriptional regulator, AraC family n=6 Tax=X... 136 8e-31 UniRef50_Q7MFB7 AraC-type DNA-binding domain-containing protein ... 136 8e-31 UniRef50_Q0B9P3 Transcriptional regulator, AraC family n=14 Tax=... 136 9e-31 UniRef50_C7MAZ5 Transcriptional regulator containing an amidase ... 136 9e-31 UniRef50_A3D530 Transcriptional regulator, AraC family n=12 Tax=... 135 1e-30 UniRef50_C3KCF4 Putative transcriptional regulator n=1 Tax=Pseud... 135 1e-30 UniRef50_Q3JQZ2 Transcriptional regulator, AraC family n=59 Tax=... 135 1e-30 UniRef50_B1JZJ0 Transcriptional regulator, AraC family n=2 Tax=B... 135 1e-30 UniRef50_Q13M62 Transcriptional regulator, AraC family n=4 Tax=B... 135 1e-30 UniRef50_B1TGD6 Transcriptional regulator, AraC family n=7 Tax=P... 135 1e-30 UniRef50_Q4KJ22 Transcriptional regulator, AraC family n=7 Tax=P... 134 3e-30 UniRef50_D1RUP3 Transcriptional regulatory protein n=2 Tax=Enter... 134 3e-30 UniRef50_Q14GY1 Transcriptional regulator araC family protein n=... 134 4e-30 UniRef50_B9R0N9 Transcriptional regulator, AraC family protein n... 134 4e-30 UniRef50_A3Y5B2 Probable transcriptional regulator n=1 Tax=Marin... 133 5e-30 UniRef50_A9ISK4 Transcriptional regulator, AraC family n=3 Tax=P... 133 5e-30 UniRef50_Q4K821 Transcriptional regulator, AraC family n=22 Tax=... 133 6e-30 UniRef50_Q391T4 Transcriptional regulator, AraC family n=8 Tax=P... 133 6e-30 UniRef50_Q0KFJ5 Transcriptional regulator, AraC-family n=11 Tax=... 133 6e-30 UniRef50_D1X8C9 Transcriptional regulator, AraC family n=2 Tax=S... 133 6e-30 UniRef50_B4EHM1 AraC family regulatory protein n=5 Tax=Burkholde... 133 8e-30 UniRef50_C3K8M6 Putative AraC-family regulatory protein n=1 Tax=... 132 1e-29 UniRef50_A5F0T8 Transcriptional regulator, AraC/XylS family n=40... 132 1e-29 UniRef50_Q47EU9 Transcriptional regulator, AraC family n=4 Tax=B... 132 2e-29 UniRef50_C4WMA6 AraC family transcriptional regulator n=1 Tax=Oc... 131 2e-29 UniRef50_Q2SEK4 AraC-type DNA-binding domain-containing protein ... 131 3e-29 UniRef50_B0T088 Transcriptional regulator, AraC family n=1 Tax=C... 130 3e-29 UniRef50_C8Q2C9 Transcriptional regulator, AraC family n=1 Tax=P... 130 5e-29 UniRef50_B5WKD5 Transcriptional regulator, AraC family n=1 Tax=B... 129 7e-29 UniRef50_A6W2J3 Transcriptional regulator, AraC family n=1 Tax=M... 129 1e-28 UniRef50_D2B3A1 AraC family transcriptional regulator n=5 Tax=Ac... 129 1e-28 UniRef50_Q0BZS2 Transcriptional regulator, AraC family n=1 Tax=H... 129 1e-28 UniRef50_A1K8N6 Putative AraC-family transcriptional regulator n... 129 1e-28 UniRef50_B7GXZ6 Bacterial regulatory helix-turn-helix protein, A... 127 3e-28 UniRef50_A1VPE7 Transcriptional regulator, AraC family n=2 Tax=C... 126 7e-28 UniRef50_Q28MP8 Transcriptional regulator, AraC family n=1 Tax=J... 125 1e-27 UniRef50_A1BBK0 Transcriptional regulator, AraC family n=2 Tax=A... 125 1e-27 UniRef50_C5CUS1 Transcriptional regulator, AraC family n=1 Tax=V... 125 1e-27 UniRef50_A8GH45 Transcriptional regulator, AraC family n=18 Tax=... 125 2e-27 UniRef50_Q8EHW8 Transcriptional regulator, AraC/XylS family n=3 ... 125 2e-27 UniRef50_B4SQ42 Transcriptional regulator, AraC family n=5 Tax=X... 124 3e-27 UniRef50_B7GW45 Bacterial regulatory helix-turn-helix protein, A... 124 3e-27 UniRef50_A3RTS8 Transcriptional regulator, AraC family n=4 Tax=R... 124 4e-27 UniRef50_Q11FA3 Transcriptional regulator, AraC family n=1 Tax=C... 124 4e-27 UniRef50_D2BBL9 Transcriptional regulator, AraC-family n=18 Tax=... 124 4e-27 UniRef50_A0KTL0 Transcriptional regulator, AraC family n=25 Tax=... 124 5e-27 UniRef50_UPI00019092C6 AraC family transcriptional regulator n=1... 124 5e-27 UniRef50_B0VLM5 Putative transcriptional regulator (AraC family)... 123 6e-27 UniRef50_B1JGH9 Transcriptional regulator, AraC family n=26 Tax=... 123 6e-27 UniRef50_Q1ZB18 Transcriptional Regulator, AraC family protein n... 123 7e-27 UniRef50_C3JKZ1 Transcriptional regulator, AraC family n=2 Tax=R... 123 8e-27 UniRef50_A5V470 Transcriptional regulator, AraC family n=1 Tax=S... 123 9e-27 UniRef50_A6WQB9 Helix-turn-helix-domain containing protein AraC ... 121 3e-26 UniRef50_A8GAI3 Transcriptional regulator, AraC family n=2 Tax=S... 120 5e-26 UniRef50_Q0TI30 Transcriptional regulator, AraC family n=14 Tax=... 120 5e-26 UniRef50_A9IA98 Transcriptional regulator, AraC family n=1 Tax=B... 120 6e-26 UniRef50_A0KEB0 Transcriptional regulator, AraC/XylS family n=25... 120 7e-26 UniRef50_A9HXG4 Transcriptional regulator, AraC family n=3 Tax=P... 119 9e-26 UniRef50_C3JM12 Transcriptional regulator, AraC family n=2 Tax=R... 119 1e-25 UniRef50_A8T3D4 AraC-type DNA-binding domain-containing protein ... 119 1e-25 UniRef50_C9PF84 Transcriptional regulator AraC family n=1 Tax=Vi... 119 2e-25 UniRef50_Q47Y50 Transcriptional regulator, araC family n=1 Tax=C... 119 2e-25 UniRef50_C4XL68 AraC family transcriptional regulator n=2 Tax=De... 118 2e-25 UniRef50_Q7CRR0 Transcriptional regulator, AraC family n=4 Tax=R... 118 2e-25 UniRef50_B3Q9E6 Transcriptional regulator, AraC family n=2 Tax=R... 118 2e-25 UniRef50_B1KGB7 Transcriptional regulator, AraC family n=2 Tax=S... 118 3e-25 UniRef50_C9PF82 Substrate-binding transcriptional regulator AraC... 117 3e-25 UniRef50_C1A6S8 AraC family transcriptional regulator n=1 Tax=Ge... 117 3e-25 UniRef50_B9JII8 Transcriptional regulator protein n=1 Tax=Agroba... 117 4e-25 UniRef50_A6V354 Transcriptional regulator, AraC family n=3 Tax=P... 117 5e-25 UniRef50_A9ILC9 Transcriptional regulator, AraC family n=3 Tax=B... 116 7e-25 UniRef50_Q5E435 Transcriptional regulator, AraC family n=3 Tax=V... 115 1e-24 UniRef50_C6RQZ7 Transcriptional regulator, AraC family n=1 Tax=A... 115 1e-24 UniRef50_C9NXQ1 Transcriptional regulator AraC family n=1 Tax=Vi... 115 2e-24 UniRef50_D1P6X5 Transcriptional regulator, AraC family n=1 Tax=P... 115 2e-24 UniRef50_B7H290 Bacterial regulatory helix-turn-helix protein, A... 114 4e-24 UniRef50_B5XX95 Transcriptional regulator, AraC family n=7 Tax=E... 113 5e-24 UniRef50_B2UKA3 Transcriptional regulator, AraC family n=8 Tax=B... 113 8e-24 UniRef50_C8QCP4 Transcriptional regulator, AraC family n=1 Tax=P... 113 8e-24 UniRef50_A3QGH9 Transcriptional regulator, AraC family n=1 Tax=S... 113 8e-24 UniRef50_Q7NRZ6 Probable transcriptional regulator AraC family n... 112 1e-23 UniRef50_B5GYF3 AraC-family transcriptional regulator n=4 Tax=Ac... 112 1e-23 UniRef50_Q3JG82 AraC family regulatory protein n=50 Tax=Proteoba... 112 1e-23 UniRef50_Q7VTI7 AraC-family regulatory protein n=3 Tax=Bordetell... 112 2e-23 UniRef50_Q2BQ21 Transcriptional regulator, AraC family protein n... 112 2e-23 UniRef50_Q84HW2 Transcription regulator n=1 Tax=Rhizobium sp. TA... 112 2e-23 UniRef50_C8QEY4 Transcriptional regulator, AraC family n=1 Tax=P... 112 2e-23 UniRef50_UPI0001B55F3C AraC family transcriptional regulator n=3... 112 2e-23 UniRef50_B4EJY3 AraC family regulatory protein n=10 Tax=Burkhold... 111 2e-23 UniRef50_A6V4X5 Probable transcriptional regulator n=7 Tax=Pseud... 111 3e-23 UniRef50_B6ELX6 HTH-type transcriptional regulator, AraC family ... 110 4e-23 UniRef50_A5U9G2 AraC-family transcriptional regulator n=12 Tax=M... 110 5e-23 UniRef50_Q2L001 AraC-family transcriptional regulator n=4 Tax=Bo... 110 6e-23 UniRef50_Q47UH5 Substrate-binding transcriptional regulator, Ara... 110 6e-23 UniRef50_Q01YV9 Transcriptional regulator, AraC family n=1 Tax=C... 110 6e-23 UniRef50_C6DFV4 Transcriptional regulator, AraC family n=1 Tax=P... 110 6e-23 UniRef50_B1LVX0 Transcriptional regulator, AraC family n=3 Tax=R... 110 7e-23 UniRef50_A0KHN7 Transcriptional regulator, AraC family n=1 Tax=A... 109 8e-23 UniRef50_A9BNM6 Transcriptional regulator, AraC family n=3 Tax=P... 109 8e-23 UniRef50_D0L975 Helix-turn-helix-domain containing protein AraC ... 109 1e-22 UniRef50_D1BCS3 DNA-binding domain-containing protein, AraC-type... 108 2e-22 UniRef50_B4SPX2 AraC protein arabinose-binding/dimerisation n=2 ... 108 2e-22 UniRef50_C1MBM6 Transcriptional regulator n=2 Tax=Citrobacter Re... 108 3e-22 UniRef50_B4SMW0 Transcriptional regulator, AraC family n=3 Tax=S... 108 3e-22 UniRef50_B4SKF1 Transcriptional regulator, AraC family n=2 Tax=S... 107 3e-22 UniRef50_C3JWU5 Transcriptional regulator, AraC family n=4 Tax=R... 107 6e-22 UniRef50_B2I1A9 AraC-type DNA-binding domain-containing protein ... 105 2e-21 UniRef50_C7JHN7 Transcriptional regulator AraC n=8 Tax=Acetobact... 105 2e-21 UniRef50_Q28KW4 Transcriptional regulator, AraC family n=1 Tax=J... 105 2e-21 UniRef50_D1BHF8 DNA-binding domain-containing protein, AraC-type... 105 2e-21 UniRef50_A6SYJ9 Transcriptional regulator, AraC family n=2 Tax=O... 104 3e-21 UniRef50_A8G994 Transcriptional regulator, AraC family n=12 Tax=... 104 3e-21 UniRef50_C3JLV5 AraC-family transcriptional regulator n=2 Tax=Rh... 104 3e-21 UniRef50_A4CF02 Transcriptional regulator, araC family protein n... 104 3e-21 UniRef50_Q13VV8 Transcriptional regulator, AraC family n=2 Tax=P... 104 4e-21 UniRef50_B5EUU3 Transcriptional regulator, AraC/XylS family n=29... 104 4e-21 UniRef50_A9BQK3 Transcriptional regulator, AraC family n=8 Tax=B... 104 4e-21 UniRef50_C8QA12 Transcriptional regulator, AraC family n=1 Tax=P... 104 4e-21 UniRef50_D1WVC3 Transcriptional regulator, AraC family n=3 Tax=A... 103 4e-21 UniRef50_Q212B5 Transcriptional regulator, AraC family n=1 Tax=R... 103 5e-21 UniRef50_A6VY36 Helix-turn-helix-domain containing protein AraC ... 103 6e-21 UniRef50_D1VIF5 Transcriptional regulator, AraC family n=1 Tax=F... 103 8e-21 UniRef50_C3X452 Putative uncharacterized protein n=2 Tax=Oxaloba... 102 1e-20 UniRef50_C7I316 Transcriptional regulator, AraC family n=1 Tax=T... 102 1e-20 UniRef50_Q13JN4 Transcriptional regulator, AraC family n=13 Tax=... 102 1e-20 UniRef50_Q0B8S9 Transcriptional regulator, AraC family n=1 Tax=B... 102 1e-20 UniRef50_Q2KXY1 AraC-family transcriptional regulator n=5 Tax=Pr... 102 2e-20 UniRef50_D1XNW1 Transcriptional regulator, AraC family n=1 Tax=S... 102 2e-20 UniRef50_Q5LMG8 Transcriptional regulator, AraC family n=1 Tax=R... 101 2e-20 UniRef50_C6CCZ8 Transcriptional regulator, AraC family n=3 Tax=D... 101 3e-20 UniRef50_D1BGA1 DNA-binding domain-containing protein, AraC-type... 100 4e-20 UniRef50_B9K583 Transcriptional regulator n=3 Tax=Alphaproteobac... 100 4e-20 UniRef50_B9TN09 HTH-type transcriptional repressor of iron prote... 100 5e-20 UniRef50_B5I4G1 AraC-family transcriptional regulator n=1 Tax=St... 100 7e-20 UniRef50_A8L2S5 Transcriptional regulator, AraC family n=3 Tax=A... 99 2e-19 UniRef50_C0YIN0 AraC/XylS family transcriptional regulator n=1 T... 99 2e-19 UniRef50_D1BFL9 DNA-binding domain-containing protein, AraC-type... 99 2e-19 UniRef50_Q091X7 Helix-turn-helix, AraC type n=1 Tax=Stigmatella ... 98 4e-19 UniRef50_A8AKK6 Putative uncharacterized protein n=1 Tax=Citroba... 97 7e-19 UniRef50_C3JND7 Transcriptional regulator, AraC family n=2 Tax=R... 96 1e-18 UniRef50_Q5FU43 Transcriptional regulator, AraC family n=1 Tax=G... 96 1e-18 UniRef50_A8U313 Helix-turn-helix, AraC type:Arac protein, arabin... 96 2e-18 UniRef50_A0R133 Transcriptional regulator, AraC family protein n... 95 3e-18 UniRef50_D0J7V7 Transcriptional regulator, AraC family n=6 Tax=P... 93 1e-17 UniRef50_D1BBW6 DNA-binding domain-containing protein, AraC-type... 92 2e-17 UniRef50_D1WSG5 Transcriptional regulator, AraC family n=3 Tax=S... 92 2e-17 UniRef50_Q1ZV01 Transcriptional regulator, AraC family protein n... 92 2e-17 UniRef50_C0YJ90 AraC family transcriptional regulator n=1 Tax=Ch... 92 2e-17 UniRef50_D1UHS6 Transcriptional regulator, AraC family n=1 Tax=B... 92 2e-17 UniRef50_C7R5F1 Transcriptional regulator, AraC family n=1 Tax=J... 91 3e-17 UniRef50_D1XRU9 Transcriptional regulator, AraC family n=4 Tax=A... 91 4e-17 UniRef50_A5VF29 Transcriptional regulator, AraC family n=2 Tax=A... 90 1e-16 UniRef50_Q7NRR7 Probable transcriptional regulator n=1 Tax=Chrom... 89 2e-16 UniRef50_UPI000050FCF9 AraC family transcriptional regulator n=1... 88 3e-16 UniRef50_A8L421 Transcriptional regulator, AraC family n=12 Tax=... 88 3e-16 UniRef50_C0YKZ5 AraC family transcriptional regulator n=1 Tax=Ch... 87 5e-16 UniRef50_D1VDY4 Transcriptional regulator, AraC family n=1 Tax=F... 87 8e-16 UniRef50_B5H317 AraC-type DNA-binding domain-containing protein ... 86 9e-16 UniRef50_C6C927 Transcriptional regulator, AraC family n=2 Tax=D... 86 1e-15 UniRef50_B9T9R1 Putative uncharacterized protein n=4 Tax=Ricinus... 85 2e-15 UniRef50_D1BHB2 Transcriptional regulator, AraC family n=10 Tax=... 85 2e-15 UniRef50_C9PG34 Transcriptional regulator AraC family n=1 Tax=Vi... 85 2e-15 UniRef50_A5EPW3 Transcriptional regulator, AraC family n=3 Tax=B... 85 3e-15 UniRef50_Q2S7S2 AraC-type DNA-binding domain-containing protein ... 84 4e-15 UniRef50_A5FK83 Transcriptional regulator, AraC family n=3 Tax=B... 84 6e-15 UniRef50_C3JVD6 Transcriptional regulator, AraC family n=3 Tax=R... 83 1e-14 UniRef50_Q3HKF1 Transcriptional regulator, AraC family n=2 Tax=R... 82 2e-14 UniRef50_C8QDM1 Transcriptional regulator, AraC family n=1 Tax=P... 82 2e-14 UniRef50_D0LZ72 Transcriptional regulator, AraC family n=1 Tax=H... 82 2e-14 UniRef50_A8LCQ9 Transcriptional regulator, AraC family n=1 Tax=F... 81 5e-14 UniRef50_C4WPU9 AraC family transcriptional regulator n=1 Tax=Oc... 80 9e-14 UniRef50_A9IG40 Putative transcriptional regulator n=1 Tax=Borde... 79 2e-13 UniRef50_D0KLM1 Transcriptional regulator, AraC family n=2 Tax=E... 78 3e-13 UniRef50_A9GKK5 Transcriptional regulator, AraC family n=1 Tax=S... 78 3e-13 UniRef50_A6GAR4 Putative transcriptional regulator n=1 Tax=Plesi... 75 3e-12 UniRef50_UPI000197B237 hypothetical protein BACCOPRO_02201 n=1 T... 75 3e-12 UniRef50_Q1LNA3 Transcriptional regulator, AraC family n=1 Tax=C... 74 4e-12 UniRef50_B4R9V1 Transcriptional regulator, AraC family n=1 Tax=P... 74 6e-12 UniRef50_B5CUH6 Putative uncharacterized protein n=1 Tax=Bactero... 74 8e-12 UniRef50_UPI00016AD7BA helix-turn-helix- domain containing prote... 74 8e-12 UniRef50_Q28SV1 Transcriptional regulator, AraC family n=1 Tax=J... 72 2e-11 UniRef50_A3XQJ9 Probable transcription regulator protein n=1 Tax... 72 2e-11 UniRef50_C5PU57 AraC family transcriptional regulator n=1 Tax=Sp... 72 2e-11 UniRef50_C7PA31 Transcriptional regulator, AraC family n=1 Tax=C... 71 3e-11 UniRef50_A5KTY3 Transcriptional regulator, araC family protein n... 71 4e-11 UniRef50_B5GU05 HTH-type transcriptional repressor n=1 Tax=Strep... 69 2e-10 UniRef50_B3JKA4 Putative uncharacterized protein n=1 Tax=Bactero... 69 2e-10 UniRef50_A6ED21 Transcriptional regulator, AraC family protein n... 69 2e-10 UniRef50_Q1QZK4 Transcriptional regulator, AraC family n=1 Tax=C... 69 2e-10 UniRef50_C2FVA1 AraC family transcriptional regulator n=1 Tax=Sp... 68 3e-10 UniRef50_C3JMH4 Transcriptional regulator, AraC family n=2 Tax=R... 67 6e-10 UniRef50_A0KFD0 Transcriptional regulator, AraC family n=1 Tax=A... 67 7e-10 UniRef50_A6B1F0 Transcriptional regulator, AraC/XylS family (Fra... 66 1e-09 UniRef50_C7PGY2 Transcriptional regulator, AraC family n=1 Tax=C... 63 9e-09 >UniRef50_P76241 Uncharacterized HTH-type transcriptional regulator yeaM n=55 Tax=Enterobacteriaceae RepID=YEAM_ECOLI Length = 273 Score = 567 bits (1462), Expect = e-160, Method: Compositional matrix adjust. Identities = 273/273 (100%), Positives = 273/273 (100%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW Sbjct: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN Sbjct: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120 Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW Sbjct: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180 Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF Sbjct: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240 Query: 241 ITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ 273 ITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ Sbjct: 241 ITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ 273 >UniRef50_A4JQ17 Transcriptional regulator, AraC family n=56 Tax=Proteobacteria RepID=A4JQ17_BURVG Length = 325 Score = 276 bits (705), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 132/250 (52%), Positives = 168/250 (67%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 +PD AVA C+H PVH+H+KGQL+LALHGA+TC V A W+VPPQ VWI Sbjct: 46 DPDAIDRPAVAMCMHVDEHAPEIPVHKHQKGQLVLALHGAVTCRVAGAFWIVPPQCGVWI 105 Query: 71 PGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130 PG + HSN T NA LC+LF EP V +PT CCTL ISP+ RE+I+ LA Sbjct: 106 PGEMPHSNHATPNARLCYLFAEPGVVDLPTECCTLSISPMLREMIMHLAGAPLDYEQGGH 165 Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190 T RL +VL EL P ++L+LPV+ HP+IR M + + P + + QWA AMSER+ Sbjct: 166 TDRLARVLLHELTLMPVERLYLPVTDHPRIRQMADALNANPGDRSTVSQWAKRLAMSERS 225 Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250 LARL+V ETGL+F +WRQQLQL++A++ L G +VQ+V+ LGY+S TAFITMFKK LG Sbjct: 226 LARLVVSETGLTFGRWRQQLQLLVAVRELAGGASVQRVSDELGYESVTAFITMFKKALGH 285 Query: 251 TPGRYIARLT 260 +PGRY A L Sbjct: 286 SPGRYFAALA 295 >UniRef50_B5RKL9 Transcriptional regulator, AraC family n=2 Tax=cellular organisms RepID=B5RKL9_KLEP3 Length = 264 Score = 264 bits (674), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 124/250 (49%), Positives = 168/250 (67%) Query: 10 YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69 + D +AA+A + + + H HRKGQLIL++ GA+ C V++ALW+VPP +AVW Sbjct: 14 FNADDFSQAAIALHVSSSGEYAGQRPHAHRKGQLILSMRGAVRCEVDDALWLVPPGHAVW 73 Query: 70 IPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129 +PG + H ++T NA+ CFLFIEP A MP CCT+ ++PL REL+L LA + T + Sbjct: 74 VPGEIPHRCRITKNADTCFLFIEPGAAAMPEICCTIAVTPLVRELVLYLAEQEHTYSPDS 133 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 T RL VL + +P P + LHLPVS HPKIR M E + P + L QWA A+SER Sbjct: 134 KTARLAAVLLEHIPDVPVEALHLPVSDHPKIRIMAEALFNEPDDRRTLKQWAAHLAISER 193 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 +LARLI + TG+SF +WRQQL L++AL L +G VQ+VA TLGYDS +AFITMF+K LG Sbjct: 194 SLARLIKEATGMSFGRWRQQLHLMIALSHLSEGQPVQRVAGTLGYDSVSAFITMFRKALG 253 Query: 250 QTPGRYIARL 259 ++P +Y + L Sbjct: 254 KSPTQYFSSL 263 >UniRef50_C5CZV0 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZV0_VARPS Length = 292 Score = 246 bits (629), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 121/256 (47%), Positives = 159/256 (62%) Query: 3 HRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMV 62 HR +E D+ A I P HQH +GQL + L G +TC V ALWM Sbjct: 35 HRQGAWTFEFDKMEARVAAVRIRTEALAEGLPAHQHPQGQLAMVLRGTVTCEVPGALWMA 94 Query: 63 PPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRT 122 P +WIPGGV HS +V+A +CFLF+E +A MP TCC+L +SPL RELIL LA Sbjct: 95 PLHGGLWIPGGVPHSLRVSAEGNVCFLFVEDAAAAMPQTCCSLSVSPLLRELILYLAALP 154 Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182 + EP RL VL D+L + P + +HLPVS P++R +++ + + P + QWA Sbjct: 155 EGAQREPQALRLHAVLLDQLARMPTEAMHLPVSEEPRLRRLIDALMRDPADRTTAAQWAS 214 Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242 AMSER L RL+ ETG+SF +W Q+L+LI+ALQ L G +VQ+VAH LGYDS +AFI Sbjct: 215 RLAMSERTLTRLVQLETGMSFGRWSQRLRLIVALQWLTSGLSVQQVAHGLGYDSVSAFIA 274 Query: 243 MFKKGLGQTPGRYIAR 258 MF+K +GQ P RY+AR Sbjct: 275 MFRKAMGQPPARYLAR 290 >UniRef50_B8J3U2 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=B8J3U2_DESDA Length = 269 Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 119/263 (45%), Positives = 155/263 (58%), Gaps = 1/263 (0%) Query: 7 LNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQY 66 L + PD+ A + +E P HQH GQL+L L G+ C V LW+VPPQ Sbjct: 7 LAAFSPDQWDIPVTARKVDVVRNEYEMPTHQHTAGQLLLTLRGSTACRVFEDLWLVPPQC 66 Query: 67 AVWIPGGVEHSNQVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQ 125 AVW+P H N++TA + +C LFI + + P TCCTL ISPL RELI +A Sbjct: 67 AVWVPPNTPHCNRITARSSVCLLFIRQEHIRLLPATCCTLSISPLVRELIRHVAALPPED 126 Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185 RLIQVL DEL + P L LPVSS +++++ E + + P E L WA Sbjct: 127 MLAERGERLIQVLLDELSRMPATGLRLPVSSDIRLQSIAESITEAPAERKDLSAWARHIG 186 Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245 MS R+LARL+V+ETGLSF +WRQQL L+MA+Q L G +VQ+ A LGY+S TAFITMFK Sbjct: 187 MSRRSLARLVVRETGLSFGRWRQQLLLVMAIQMLSDGISVQQTAWDLGYESVTAFITMFK 246 Query: 246 KGLGQTPGRYIARLTTVSPQSAK 268 K LG +P +Y+ R +S Sbjct: 247 KALGASPAKYVQRYFATGTESGS 269 >UniRef50_Q1ZT94 Putative transcriptional regulator n=3 Tax=Photobacterium RepID=Q1ZT94_PHOAS Length = 266 Score = 226 bits (576), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 107/262 (40%), Positives = 154/262 (58%), Gaps = 4/262 (1%) Query: 1 MMHRLNLN----GYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVE 56 M + LN ++ D + + AVA + P H HRKGQL+L L G + C + Sbjct: 1 MTKNITLNKTIPSFDSDSYSQKAVAMRFSRSDVDEELPFHTHRKGQLVLPLSGCVRCKIA 60 Query: 57 NALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELIL 116 NA+WMVP AVWIP V HS ++ + ++C LFIEP + +P CTL +SPL RELI+ Sbjct: 61 NAIWMVPTNCAVWIPSQVPHSLTISDDIDICNLFIEPDVIGLPEKACTLSVSPLLRELIV 120 Query: 117 TLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGA 176 LA E T RL+ VL EL P +Q P+ P+++ + + P + Sbjct: 121 KLAELDQFYEDEGNTARLVDVLIYELSTMPSEQFDFPIPEEPRLQKIALALIANPSDRST 180 Query: 177 LGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDS 236 +G+WA +AMSER LARL+ +E GL+F WR QL +++ALQ L G+ VQ+++ LGY+S Sbjct: 181 VGEWASKYAMSERTLARLVKQELGLTFGNWRGQLHIVIALQKLSSGEPVQRISEDLGYES 240 Query: 237 TTAFITMFKKGLGQTPGRYIAR 258 +AFIT FK+ LG+ P +YI + Sbjct: 241 VSAFITFFKRTLGRPPKQYIKK 262 >UniRef50_Q15UL1 Transcriptional regulator, AraC family n=3 Tax=Alteromonadales RepID=Q15UL1_PSEA6 Length = 263 Score = 225 bits (574), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 108/225 (48%), Positives = 147/225 (65%) Query: 34 PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93 P+H H KGQLILALHG +TC V+ +WMVP Q A+WIP HSN+ + +AELC +FI+P Sbjct: 36 PLHTHSKGQLILALHGHVTCEVQGKMWMVPTQSAIWIPTHTLHSNRASDHAELCHVFIQP 95 Query: 94 SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153 + MP CT +S L +ELI A + T RL QVL D + + PQQ ++LP Sbjct: 96 GELRMPDKTCTFALSVLAKELICHFAKQDQHYPHFSPTNRLAQVLIDVVSESPQQPMNLP 155 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 + SHP + + + + P + L QWA +FAMSER LARLI +ETG++F WR Q+ +I Sbjct: 156 LPSHPTVAKLAQQLLSYPDDKKTLPQWASYFAMSERTLARLIKRETGMTFGHWRAQMHVI 215 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 +A+Q L+ TVQ+V+ LGY S +AFITMFK LG++P RYI + Sbjct: 216 IAVQKLMTNMTVQRVSEYLGYSSVSAFITMFKNILGESPKRYIKQ 260 >UniRef50_Q216D2 Transcriptional regulator, AraC family n=7 Tax=Bacteria RepID=Q216D2_RHOPB Length = 280 Score = 224 bits (570), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 109/264 (41%), Positives = 165/264 (62%), Gaps = 2/264 (0%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 +PD VAF + L H+HRK QL+L+L G +TC ++ LW+VPPQ+A+WI Sbjct: 15 DPDDIPRPVVAFGVTLAGPGLELAPHRHRKAQLLLSLRGVLTCEAQSGLWLVPPQHAIWI 74 Query: 71 PGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129 PGG H+ + T E +F+EP+ + MP +CCT+ ++PL REL++ A Sbjct: 75 PGGALHAIRATGTIEGYDIFVEPALTLGMPASCCTMSVTPLLRELLVRAAGFPLLYPEGG 134 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 L +L DE+ Q+L+LP+ + ++R +VE+M P + G + WA +SER Sbjct: 135 AESHLFTLLLDEVATASVQRLYLPMPADVRLRRIVELMMADPTDRGTMASWAKRAGLSER 194 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 LARL+ +ETG+SF +WRQQL +++ALQ + +G +Q++A LGY+S +F+TMF+K LG Sbjct: 195 TLARLLARETGMSFGRWRQQLTIMLALQRMAEGAPIQRLAVELGYESAASFVTMFRKTLG 254 Query: 250 QTPGRYIARLTTVSPQSAKPDPRQ 273 +PGRY+ARL SP +A DP+Q Sbjct: 255 SSPGRYMARLRG-SPAAADQDPKQ 277 >UniRef50_Q7D2T6 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria RepID=Q7D2T6_AGRT5 Length = 215 Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 102/210 (48%), Positives = 141/210 (67%), Gaps = 2/210 (0%) Query: 47 LHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLK 106 L G +TC V + +WMVPP VW+PGG+ HSN TANA L FLFIEP A +P CCTL Sbjct: 3 LRGGVTCRVPSGMWMVPPHCGVWVPGGMLHSNVATANARLFFLFIEPGAADLPNRCCTLS 62 Query: 107 ISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEM 166 +SPL RELI+ LA+++ A+ + + +L L + P + LHLP++ P++ + Sbjct: 63 LSPLVRELIIELADQSEVATAD--SELMTTLLLSALSRMPVEHLHLPLTDEPRLARIASE 120 Query: 167 MAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQ 226 +A P + + QWA AMSE +LARL+ +TGL+F +WRQQLQLI+A++ L G TVQ Sbjct: 121 LADDPSDRSTMAQWARRVAMSENSLARLVQHQTGLTFGRWRQQLQLIIAIRSLASGATVQ 180 Query: 227 KVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 +V+ LGY+S +AFITMFKK LG +P RY+ Sbjct: 181 QVSGDLGYESVSAFITMFKKALGTSPSRYL 210 >UniRef50_A9FA95 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=A9FA95_SORC5 Length = 277 Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 103/232 (44%), Positives = 147/232 (63%), Gaps = 1/232 (0%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 T L S H HR+ QL G +TC NALW+VPP+ A+WIP GV H + A E Sbjct: 33 TGGLESEFHSHRESQLFFLERGEVTCEASNALWIVPPRSALWIPAGVLHKIRGRAPLEGY 92 Query: 88 FLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146 +F+EP A ++P CC + ++PL REL++ LA R + RL+ VLFDEL Sbjct: 93 GVFMEPDVAPSLPAECCAVSVTPLFRELLVRLAARPALYDLDGPDARLVAVLFDELAAAT 152 Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206 ++ LP+ + P++R +V+ MA+ P + +G WA + ER L RL+V+ETGLSF +W Sbjct: 153 IEKHRLPMPADPRLRKLVDAMAENPADGATMGSWARRIGVGERTLNRLLVRETGLSFGRW 212 Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 RQQL +++ALQ L +G +VQ VA LGY+S ++F+TMF+K LG +P RY+AR Sbjct: 213 RQQLHIVLALQRLSRGASVQSVASDLGYESASSFVTMFRKALGASPARYMAR 264 >UniRef50_A6W3J4 Helix-turn-helix-domain containing protein AraC type n=9 Tax=Gammaproteobacteria RepID=A6W3J4_MARMS Length = 273 Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 148/224 (66%), Gaps = 2/224 (0%) Query: 33 SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92 +P H H+KGQL+L L G +T +++ +W+VPP+ AVWIP V H NQ++ NA++C LF++ Sbjct: 43 TPWHHHQKGQLVLPLTGVVTSFIDDKMWLVPPRCAVWIPSNVMHRNQISPNADVCMLFVD 102 Query: 93 PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152 + + +P CTL I+P RELIL L + ++ +P T RL+ VL D+L Q +++ Sbjct: 103 STNLALPEITCTLTITPFVRELILHLHTQQDYEKTDPATGRLVDVLLDQLIQLEREEFDF 162 Query: 153 PVSSHPKI-RTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211 P+ P + R +E++A+ P E LG+WA FAMSER LAR+I + L+F QWR QL Sbjct: 163 PIPDEPTLNRLALELIAR-PNEKRTLGEWASDFAMSERTLARMIKRHVQLTFGQWRSQLH 221 Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 +++ALQ L +Q ++ LGYDS +AFIT FKK LG++P +Y Sbjct: 222 IVLALQKLAINLPIQTISEELGYDSVSAFITFFKKALGKSPRQY 265 >UniRef50_C5AN13 Helix-turn-helix-domain containing protein AraC type n=15 Tax=cellular organisms RepID=C5AN13_BURGB Length = 283 Score = 210 bits (534), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 96/223 (43%), Positives = 145/223 (65%), Gaps = 1/223 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H+HR+ QL+ ++ G + C +E+ +W+VPPQ AVWIPG + H+ + + E LF+EP A Sbjct: 39 HRHRRAQLLYSVRGILNCEIEDGVWIVPPQCAVWIPGDLPHAARGSGETECHCLFVEPDA 98 Query: 96 V-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 +P +CCT+ +SPL REL+L +A RLI VL DEL P + LHLP+ Sbjct: 99 APDLPKSCCTISVSPLLRELLLKVACFPELYPLGSREDRLIAVLLDELAMAPVEDLHLPM 158 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 P++R + EM+ P + + G WA MSER+++RL++ E G+SF +W +QL +I+ Sbjct: 159 PRDPRLRRLAEMLLTDPTDKTSKGDWATRIGMSERSMSRLLMHEIGMSFGRWCRQLHVIL 218 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 ALQ L KG++VQ VA LGY++ + F+TMF+K +G+ P RY+A Sbjct: 219 ALQRLTKGESVQTVALELGYENASGFVTMFRKAVGKPPARYLA 261 >UniRef50_Q0B1C2 Transcriptional regulator, AraC family n=5 Tax=Proteobacteria RepID=Q0B1C2_BURCM Length = 273 Score = 210 bits (534), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 97/252 (38%), Positives = 150/252 (59%) Query: 4 RLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63 ++N ++PD ++ + E P+H HRKGQ+++AL G++ C + W+VP Sbjct: 12 KINYQPFDPDSVDLPVISVLLETSGKEDELPMHVHRKGQMVVALSGSVMCRSPSGWWIVP 71 Query: 64 PQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTT 123 P AVWIPGG+ HSN + A+L +FI P +PT C + I+PL RELI +LA Sbjct: 72 PNGAVWIPGGIPHSNHASDFAKLYVIFIPPDEAGLPTDCRSFTITPLIRELIRSLARFPP 131 Query: 124 TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183 + RL +VL D+L + LP+S +P+++ + + P + + +W Sbjct: 132 DYPKDGPVGRLARVLLDQLALLAPDDVFLPISDNPRLQQIASALLDNPADRSTIAEWGRR 191 Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITM 243 +AMSER LARL+ ETG++F +WR++L +I+ALQ L G +V VA LGY+ +FITM Sbjct: 192 YAMSERTLARLVRSETGMTFGRWRERLHIIIALQRLSAGASVHAVALELGYEGPNSFITM 251 Query: 244 FKKGLGQTPGRY 255 FKK +GQ+PG++ Sbjct: 252 FKKTMGQSPGKF 263 >UniRef50_D1RWK8 Transcriptional regulatory protein n=2 Tax=Gammaproteobacteria RepID=D1RWK8_SEROD Length = 284 Score = 209 bits (533), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 140/223 (62%), Gaps = 1/223 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H+HRK QLI + G I C EN LW+VPPQ A+W+PG V H+ Q + E LF++ A Sbjct: 47 HRHRKAQLIYTVRGMIRCEAENGLWLVPPQCALWMPGNVLHNAQGAGDTECYCLFVDQDA 106 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 + +PT CCTL +SPL REL+L + + RL VL D++ P + LHLPV Sbjct: 107 IAGLPTHCCTLAVSPLLRELLLQASGFDPLYDEQGPEGRLTTVLLDQVVNAPIENLHLPV 166 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 S +IR + E + P + L QWA MSER+L R + ++ G+SF WR+QL +++ Sbjct: 167 SQDARIRQLTERLLANPADKATLNQWAQRIGMSERSLNRTLQQQMGMSFGHWRRQLHVML 226 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 ALQ L KGD+VQKVA LGY+S + F+TMF+K +G+ P RY+A Sbjct: 227 ALQRLTKGDSVQKVALDLGYESASGFVTMFRKAVGKPPARYLA 269 >UniRef50_A8G9B2 Transcriptional regulator, AraC family n=4 Tax=cellular organisms RepID=A8G9B2_SERP5 Length = 284 Score = 209 bits (532), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 100/223 (44%), Positives = 143/223 (64%), Gaps = 1/223 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H+HRK QLI + G I C VEN LW+VPPQ A+W+P V H+ Q + +E LF++ A Sbjct: 47 HRHRKAQLIYTVRGMIRCEVENGLWLVPPQCALWMPSNVLHNAQGASASECYCLFVDQDA 106 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 + +PT CCTL +SPL REL+ + + RL VL D+L + P + LHLPV Sbjct: 107 IAGLPTHCCTLAVSPLLRELLFQASAFEQLYDQQGPEGRLAGVLLDQLVKAPVENLHLPV 166 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 S+ +IR + E + P + LGQWA MSER+L R + ++ G+SF WR+QL +++ Sbjct: 167 SNDARIRQLTERLLANPADKATLGQWAQRIGMSERSLNRTLQQQMGMSFGHWRRQLHVVL 226 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 ALQ L +GD+VQ+VA LGY+S + F+TMF+K +G+ P RY+A Sbjct: 227 ALQRLTQGDSVQRVALDLGYESASGFVTMFRKAVGKPPARYLA 269 >UniRef50_Q4K9E0 Transcriptional regulator, AraC family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4K9E0_PSEF5 Length = 271 Score = 207 bits (527), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 106/248 (42%), Positives = 147/248 (59%), Gaps = 1/248 (0%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 +PD A I P H HRK QL+ L G ++C LW+ PPQ AVWI Sbjct: 12 DPDAIARPVCALRISTQEQRWERPWHSHRKAQLLFPLSGVLSCESAEGLWLAPPQCAVWI 71 Query: 71 PGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129 P +H Q NA LF+EP A ++P CCTL +SPL +EL+ A + Sbjct: 72 PSATDHRVQGLENALGYCLFVEPEHARSLPQACCTLAVSPLLQELLQRCAQLPYLYDQQG 131 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 RL+ V DEL P++Q+HLP+ H ++R + + + P +LGQWA +SER Sbjct: 132 AEGRLMAVALDELAAAPREQIHLPMPRHEQLRRLAGQILEQPERRLSLGQWAEQIGLSER 191 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 +L+RLIV ETGLSF +W++QL +++ L+ L +GD+V++VA TLGYDS +AFI MFKK +G Sbjct: 192 SLSRLIVAETGLSFGRWQRQLHILLGLKQLGRGDSVERVALTLGYDSASAFIRMFKKAVG 251 Query: 250 QTPGRYIA 257 Q PGR+ A Sbjct: 252 QPPGRFFA 259 >UniRef50_D2M677 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M677_RHOPA Length = 294 Score = 206 bits (525), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 96/239 (40%), Positives = 150/239 (62%), Gaps = 2/239 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H+H K QL+ G I C VE+ +W+VPPQ A+WIPGG+ H+ + E LF+ P A Sbjct: 38 HRHDKAQLLYCARGVINCEVEDGVWIVPPQCAIWIPGGLPHAAFGSGEVECICLFVAPDA 97 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 +P TCCT+ IS L R L++ + + R++ V+ DEL + P +QL LP+ Sbjct: 98 AAGLPVTCCTIAISDLLRHLLIRASELPERYDVDGPDGRIVAVILDELAKAPVEQLCLPI 157 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 S P+++ + E++ P + + +WAG A+SER+L+R+++ E G+SF WR+QL +I+ Sbjct: 158 PSDPRLKQLAELLVSSPADHATVAEWAGRVALSERSLSRMLMDEIGMSFGHWRRQLHVIL 217 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY-IARLTTVSPQSAKPDPR 272 AL+ L G+TVQ VA LGY+S ++F+TMF+K +G+ P RY + R T+V + P P+ Sbjct: 218 ALRRLSAGETVQTVALDLGYESASSFVTMFRKMVGKPPIRYLVERQTSVPLSRSDPPPK 276 >UniRef50_A8I0S5 Transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I0S5_AZOC5 Length = 272 Score = 199 bits (506), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 90/225 (40%), Positives = 140/225 (62%), Gaps = 1/225 (0%) Query: 33 SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92 SP H H+K QL+ + G I C VE+A+W+VPPQ AVWIPGGV H+ + E LFIE Sbjct: 35 SPRHHHQKAQLLFTVRGVINCEVEDAVWIVPPQCAVWIPGGVPHTVFGSGEVECISLFIE 94 Query: 93 PSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151 P A +P CCT+ +S L R L++ + R++ V+FDEL P + L Sbjct: 95 PPATPELPNACCTITVSSLLRHLLMRANELPELYDVDGPDGRIVSVIFDELAAAPVEDLR 154 Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211 LP+ +++ + +++ P + + +WA A+SER+L R++ ++ G+SF +WR+QL Sbjct: 155 LPIPGDVRLKKLTDLLIAAPADHATVAEWASRIALSERSLNRMLAEQVGMSFGRWRRQLH 214 Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 +++AL+ L G TVQ VA LGY+S ++F+TMF+K +G+ P RY+ Sbjct: 215 VVLALRRLSAGQTVQAVAMDLGYESASSFVTMFRKMVGKPPSRYL 259 >UniRef50_B4SJK4 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria RepID=B4SJK4_STRM5 Length = 282 Score = 190 bits (482), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 103/262 (39%), Positives = 137/262 (52%), Gaps = 1/262 (0%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 PDR + + D P H HRK QL++A G I LW+VPPQ A+WIP Sbjct: 16 PDRVDLPVMVLGLDPIPDAWQMPFHAHRKAQLLVATRGLIMLETAAGLWVVPPQGAIWIP 75 Query: 72 GGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130 GG+ H + +F+EP V +PT C + I+P + L+ + Sbjct: 76 GGLSHRASSSGRPHGFVVFVEPGVVPGLPTHCAAMAITPFMQALLERASALPGHYEPGSA 135 Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190 RL+ V DEL P + LHLP+ S ++R + M P E L WA MSERN Sbjct: 136 QDRLMAVFLDELIAAPPEWLHLPMPSDARLRRLANAMLDTPAERATLEVWASRIGMSERN 195 Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250 ++RL ETGLS R+WR+QL +++AL L KG TVQ VA LGYDS AF+TMF+K +G Sbjct: 196 MSRLFSGETGLSVRRWRRQLHVVVALPLLAKGRTVQAVADHLGYDSAGAFVTMFRKTVGA 255 Query: 251 TPGRYIARLTTVSPQSAKPDPR 272 P R++A T P S D R Sbjct: 256 PPKRFLAERGTRQPVSDADDQR 277 >UniRef50_Q2NTH9 Putative transcriptional regulator n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NTH9_SODGM Length = 268 Score = 189 bits (481), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 97/213 (45%), Positives = 130/213 (61%) Query: 7 LNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQY 66 L YEPDR A A ++ + +P +QHRKGQLI+ALHG ITC + +AL MVPP Sbjct: 8 LTHYEPDRDRNLATAMRLNVVQSAMETPFYQHRKGQLIMALHGGITCELTDALLMVPPHC 67 Query: 67 AVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQR 126 AVWIP HSN T NA CF+F+EP + CTL ISPL ++LIL LA Sbjct: 68 AVWIPADTPHSNHATVNARFCFVFVEPIFPGLLARSCTLFISPLLQQLILHLAELPGDYA 127 Query: 127 AEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAM 186 + T RL V+ ++L P++ L LP SSHP+IR + + + P E L WA M Sbjct: 128 LDLPTGRLAVVMLEQLANMPEENLSLPFSSHPRIRRITDTLNHSPAERRTLPAWASLVGM 187 Query: 187 SERNLARLIVKETGLSFRQWRQQLQLIMALQGL 219 +ER+LARL +KETG++F RQ+LQLI++++ L Sbjct: 188 NERSLARLFIKETGMTFGCRRQRLQLIISIREL 220 >UniRef50_Q2BLH8 Transcriptional Regulator, AraC family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLH8_9GAMM Length = 260 Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 85/226 (37%), Positives = 129/226 (57%), Gaps = 1/226 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H+H +GQL A G I + +W+VPP AVW+PG V H +AEL LF++P+ Sbjct: 35 HRHPRGQLAYAAEGIIRVYTDEGVWVVPPSQAVWVPGDVVHRTTAEVSAELRHLFVDPAY 94 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 ++ + C +++SPL RELI+ +A+ RL V+ DEL LHLP Sbjct: 95 LSGLSDQCSVVEVSPLLRELIMRVADFGDDYSTNSPASRLCAVILDELQNLKPSLLHLPG 154 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 ++ +++ ++ M + P L WA SER ++RL VKETG++F+QWR+QL L Sbjct: 155 ATDRRLQRVMHAMVENPSAEIGLNYWAEQVGASERTISRLFVKETGMNFQQWRKQLLLQE 214 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260 A+ L K + V +A LGY S +AF+ MF++ LG+ PG+Y L+ Sbjct: 215 AVDRLGKRNAVVDIALELGYRSPSAFVAMFRQALGKPPGQYFKDLS 260 >UniRef50_A5GBQ3 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=A5GBQ3_GEOUR Length = 278 Score = 164 bits (414), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 89/225 (39%), Positives = 124/225 (55%), Gaps = 1/225 (0%) Query: 32 TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91 ++ VH H +GQLI A G + +W+VPP AVW+P EH + L LF+ Sbjct: 45 SAAVHVHPRGQLIYASSGMMRVICSRDVWVVPPSQAVWVPPNQEHEVYFPGDTALRSLFV 104 Query: 92 EPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150 +PSAVT +P C LK++PL RELIL + + R++QVL DEL L Sbjct: 105 DPSAVTGLPLQCTVLKVAPLLRELILRAVQIGNSYAPDGAEWRVMQVLLDELRIAEATPL 164 Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210 LP++ ++ +++ + K P + L W S R LARL V ETGL+F WR++L Sbjct: 165 RLPMARDERVMRVIDALLKSPGDNRGLDAWGKIAGASSRTLARLFVSETGLTFGGWRKRL 224 Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 L AL L +G+ V +A LGY S +AFI MF+K LG +P RY Sbjct: 225 LLHKALDRLDRGEQVTGIAFDLGYQSLSAFIEMFRKELGVSPRRY 269 >UniRef50_B3QB90 Transcriptional regulator, AraC family n=3 Tax=Alphaproteobacteria RepID=B3QB90_RHOPT Length = 248 Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 80/222 (36%), Positives = 120/222 (54%), Gaps = 1/222 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H + QLI A+ G ++ T + W+VPP AVW+P GVEH + + + L I+ Sbjct: 25 HSHPQAQLIYAITGVVSVTTADGTWVVPPSRAVWVPAGVEHDTKSHSAVQFRSLLIDSVE 84 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 V +P C ++++PL RELIL L ++R + Q+L EL P + L LP Sbjct: 85 VMGLPVVCMAMEVTPLLRELILRLVAIADAPGRVELSRVVTQLLLMELASLPVEPLSLPT 144 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 HP++ + + P +L Q A MS + RL ETG+SF +WRQQ +L+ Sbjct: 145 PRHPQLARFCDQIRGEPAASVSLEQAARALHMSRASFMRLFQHETGMSFLRWRQQARLLH 204 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 AL L +G ++ VA GYDS +AF MF++ LG++P +Y Sbjct: 205 ALSLLAEGQSILNVALACGYDSPSAFSAMFRRVLGKSPSQYF 246 >UniRef50_D1SXH7 Transcriptional regulator, AraC family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SXH7_9BURK Length = 269 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 80/224 (35%), Positives = 126/224 (56%), Gaps = 2/224 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE-PS 94 H HR+GQLI G ++ + W++P ++A+W+P G HS+++ L++ P+ Sbjct: 34 HSHRRGQLIGCRRGVLSVGADTGHWVIPARHAIWLPPGRPHSSRMHGPFTGWSLYVAGPA 93 Query: 95 AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 ++P + CT+ +SPL E L A R +P+ RL V+ DEL + L LP+ Sbjct: 94 CQSLPDSPCTVAVSPLLWEAALRCAERANAL-PDPVQDRLAGVILDELRSMVPRPLGLPM 152 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 S ++ + + P +L WAG+ A+S R L+R V ET LSF W Q+++L+ Sbjct: 153 PSDARLLRIARGLLADPARRQSLQAWAGWAALSPRTLSRRFVAETSLSFTAWTQRVRLLR 212 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 +L+ L G +V +VA LGYDS +AFI +FK+ LG+TP Y R Sbjct: 213 SLEWLADGQSVTQVALDLGYDSVSAFIALFKRELGRTPAAYFGR 256 >UniRef50_B0TZR0 Transcriptional regulator, AraC family n=1 Tax=Francisella philomiragia subsp. philomiragia ATCC 25017 RepID=B0TZR0_FRAP2 Length = 264 Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 77/225 (34%), Positives = 123/225 (54%), Gaps = 1/225 (0%) Query: 33 SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92 S H H + QLIL G I VE +W VP A+WIP V HSN +T ++C F++ Sbjct: 32 SEYHSHSEAQLILPTKGLIQSNVEAKIWAVPLGSALWIPSYVYHSNLITKGGQMCMTFVD 91 Query: 93 P-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151 V MP C L ISPL +ELIL L+ +T ++ +++ VL D+L + + Sbjct: 92 KLMLVNMPKKACVLYISPLIKELILYLSQQTVLEQLNYENQKIASVLIDQLSKMLPTFYN 151 Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211 + S ++ + P ++ + A ++S + LAR I K+ G++F W++QL Sbjct: 152 FSLPSEKILQEVAFQWLSKPTKYKYISDMAYECSVSSKTLARKIKKDIGMNFSDWKKQLH 211 Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 +++ALQ L +G +V V+ LGY+ST+ F+T FK+ +P RY+ Sbjct: 212 IVVALQKLYEGYSVNWVSEYLGYESTSTFVTFFKRIFKCSPKRYV 256 >UniRef50_B4SSQ8 Transcriptional regulator, AraC family n=3 Tax=Stenotrophomonas RepID=B4SSQ8_STRM5 Length = 265 Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 119/222 (53%), Gaps = 1/222 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS- 94 H+HR+ QL+ A G + E W+VP A+W+P G+ H+ A + L++EP Sbjct: 43 HKHRRHQLVYAQSGLMVVRSEVGRWVVPSTRAIWVPAGIAHAVDCIAEVHMRSLYVEPEF 102 Query: 95 AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 A +P ++++PL REL+L + + R++++L DEL + LHLP Sbjct: 103 APHLPAEAFAIQVAPLLRELLLAASLIEGAHEDDSRDGRVVRLLLDELRRMDALPLHLPE 162 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 S P++ + + K P + L WA + + + R E G++F QWRQQ +L+ Sbjct: 163 PSDPRLLKICLHIQKHPADDATLQDWAQALQVDVKTIQRHFTSELGMTFGQWRQQARLLA 222 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 A++ L GD V VA +GYDS +AF +MFK+ LGQTP + Sbjct: 223 AMERLAVGDKVIDVALAMGYDSPSAFTSMFKRQLGQTPAAFF 264 >UniRef50_B6JB31 Transcriptional regulator, AraC-family n=5 Tax=Proteobacteria RepID=B6JB31_OLICO Length = 300 Score = 147 bits (371), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 77/247 (31%), Positives = 123/247 (49%), Gaps = 1/247 (0%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 E +H VA D+ P+H H + QLI G IT T N W+VP AVW+ Sbjct: 43 EDYQHTSRVVAAMARDLPDKFVIPMHSHFRSQLIFGCSGVITVTTVNGTWVVPSLRAVWV 102 Query: 71 PGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEP 129 PGGVEH + T + E+ ++++P A + +P CC + +SPL RELI+ Sbjct: 103 PGGVEHEMRTTGSVEMRTIYVDPEAASHLPRECCVVAVSPLLRELIVAAVRIPNDFSDGS 162 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 +++ ++ E+ P L LP+ ++ + + + P L ++ S+R Sbjct: 163 REEKIMSLILTEIHPDPVLPLDLPMPQDRRLLRVCQAILTDPGSNSTLAEFGQTVGASQR 222 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 L R+ ETG +F +WRQQ +L ++ L +G + +A LGY+S +AF MF++ LG Sbjct: 223 TLERMFPVETGTTFSKWRQQARLQCGIRMLAEGTPISTIALDLGYESPSAFSLMFRRALG 282 Query: 250 QTPGRYI 256 P Y Sbjct: 283 VAPSEYF 289 >UniRef50_D0J513 Pyridoxamine 5'-phosphate oxidase-related protein n=2 Tax=Comamonas testosteroni RepID=D0J513_COMTE Length = 265 Score = 147 bits (370), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 72/236 (30%), Positives = 133/236 (56%), Gaps = 3/236 (1%) Query: 30 ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89 EL+S +HQH +GQL ++ G I+ V+ LW+VP +AVW+P H+ + Sbjct: 30 ELSSEMHQHARGQLFGSIKGLISVQVDGGLWVVPAIHAVWLPPHHAHAGRSFGPYHGWSA 89 Query: 90 FI-EPSAVTMPTTCCTLKISPLCRELILTLANRT--TTQRAEPMTRRLIQVLFDELPQQP 146 ++ E + +P C +++S L RE +L +A+ + ++ + V+ DE+ P Sbjct: 90 YVAEAACANLPAQPCIIRVSGLLREAVLRIASSMPQASDQSSQAQSHICAVVLDEIRSLP 149 Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206 ++ LP+ + +++ + + + P + + WA F A+S R L+R V ETG +F W Sbjct: 150 VEEFGLPIPADARLQRIAKALIANPADERNIDDWASFGAISSRTLSRRFVSETGFNFTAW 209 Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262 RQ+++L+ +L+ L +G ++ +A LGY S +A+I++F++ G+TP Y +RL V Sbjct: 210 RQRVRLLRSLEMLAEGISITAIALDLGYASISAYISLFRRTFGETPACYRSRLKAV 265 >UniRef50_Q2F9R4 AraC-type DNA-binding domain-containing protein n=2 Tax=Vibrionaceae RepID=Q2F9R4_9VIBR Length = 265 Score = 146 bits (369), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 77/222 (34%), Positives = 121/222 (54%), Gaps = 1/222 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H HR QL+ A G + E+ LW+VPPQ AVWIP H + +A + +++ PS Sbjct: 42 HCHRHNQLVYASSGVMAVETESKLWIVPPQRAVWIPAHESHKIHMYGDAAMKNVYLLPSI 101 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 T +P L +SP+ RE+I+ L+ + Q + R++QVL D+L PQ + +P+ Sbjct: 102 DTELPNQSDVLNVSPMLREMIIHLSEQPVVQASTDSYWRIVQVLLDQLKVAPQASIQVPL 161 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 + K+ + + P + +L QWA +S R L+RL E G+SF ++RQQ++L Sbjct: 162 PNDAKLGLVCNSLLDKPADNRSLKQWAEEINVSSRTLSRLFRNEVGMSFIEYRQQVRLFH 221 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 +L L + V VA G+ S +AF +FK+ G TPGR+ Sbjct: 222 SLTLLAQTHPVTTVALECGFTSVSAFNHLFKQSFGVTPGRFF 263 >UniRef50_B0UH11 Transcriptional regulator, AraC family n=3 Tax=Rhizobiales RepID=B0UH11_METS4 Length = 287 Score = 146 bits (368), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 83/249 (33%), Positives = 128/249 (51%), Gaps = 5/249 (2%) Query: 10 YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69 YE RH A+ +G P H H++ QLI A G + T + LW++PPQ AVW Sbjct: 23 YEASRHGIVAMPKEFPSG---FHVPSHVHKRAQLIYATAGVMEVTTADGLWLLPPQRAVW 79 Query: 70 IPGGVEHSNQVTANAELCFLFI--EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRA 127 +P G+ H+ + + L L+I E + P T ++++S L RELIL +A + Sbjct: 80 MPAGIAHAMRARCDVSLRTLYIAQEACPASFPETPRSVRVSVLLRELILRVARMPLEREP 139 Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187 RR++ +L E+ + L+LP+ ++ + + + P + LG WA S Sbjct: 140 TEHERRVLDLLLYEITWEADGVLYLPMPKDKRLAGLCQALIDDPGDGRDLGDWARQAGAS 199 Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247 R LARL +E G SF WR+QL+ + AL L G+ + VA LGY++ AF MF+ Sbjct: 200 SRTLARLFKREFGSSFLVWRKQLRALCALPRLAAGEPISVVAIDLGYETPGAFAAMFRGV 259 Query: 248 LGQTPGRYI 256 +G+ P RY Sbjct: 260 MGERPSRYF 268 >UniRef50_Q4ZYQ3 Helix-turn-helix, AraC type:Arac protein, arabinose-binding/dimerisation n=22 Tax=Proteobacteria RepID=Q4ZYQ3_PSEU2 Length = 267 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 80/223 (35%), Positives = 117/223 (52%), Gaps = 2/223 (0%) Query: 33 SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92 +P H+H Q A+ G + + PPQ+ VW+P G+EH + AE+ L+I Sbjct: 41 TPPHRHDWVQFSYAISGVLGVHTAEGSFFAPPQWGVWVPAGLEHEVVTSMRAEMRSLYIR 100 Query: 93 PS-AVTMPTTCCTLKISPLCRELILTLANRTTTQ-RAEPMTRRLIQVLFDELPQQPQQQL 150 + + P C L+++PL RELI + + RL+QVL D+L Q P+ Sbjct: 101 TADSGWAPQRCRVLEVTPLARELIKSFCLLPVDYPEQDSHEARLVQVLLDQLAQLPEVGF 160 Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210 LP+ HP++ + + + P L WA SE+ L RL +ETGLSFR WRQ+ Sbjct: 161 SLPLPRHPRLLGLCNELIEEPGRLITLHDWAARLGTSEKTLMRLFQRETGLSFRGWRQRA 220 Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253 +L+ +L L +G +V + A GYDST+AFI FK G TPG Sbjct: 221 RLLSSLSALEEGASVTRTALACGYDSTSAFIAAFKGLFGHTPG 263 >UniRef50_A1TK09 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria RepID=A1TK09_ACIAC Length = 276 Score = 144 bits (362), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 119/229 (51%), Gaps = 5/229 (2%) Query: 34 PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93 P QH GQ + G I TV++ + PP + VW+P G EH + A+ E + ++ Sbjct: 43 PTEQHPWGQFVYPRAGVIELTVKSNRYAAPPDFGVWLPPGTEHVAR--ADGETSYFVLDI 100 Query: 94 SA---VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150 A +P L +S + + + L L R + P RL++VL D+L Sbjct: 101 DADLCARLPRRASVLSVSAIAKAVFLDLQKRQVRKPQSPEDVRLMEVLIDQLSASVPVDS 160 Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210 LP+SS +R ++E + K P + L +WA + +ER LAR ++ G++F +WRQ+L Sbjct: 161 FLPMSSDAALRNVLEALCKNPGDSRTLVEWARYVHSTERTLARRCTRDLGMTFLEWRQRL 220 Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 +L A L G VQ VA LGY +T+AFI MF+K +G TP + RL Sbjct: 221 RLSRAFAMLADGLAVQVVAQQLGYGTTSAFIAMFQKTIGTTPNTFRGRL 269 >UniRef50_A5FCF5 Transcriptional regulator, AraC family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FCF5_FLAJ1 Length = 272 Score = 142 bits (359), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 74/224 (33%), Positives = 124/224 (55%), Gaps = 5/224 (2%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF--LFIEP 93 H H + QLI A G + V N +W+V P +WIP GVEH QVT ++ + +FI+P Sbjct: 39 HSHPRAQLIYATRGVMNVVVGNNIWVVNPLQGLWIPSGVEH--QVTFQKDVNYYSVFIDP 96 Query: 94 SAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152 SA+ +P + I ++L+ + + T+ R+I V DEL L Sbjct: 97 SAIGGLPEKSFSFDIPMFLKQLVFKIISFGTSGNLTESQLRIIYVFLDELALIVPSATFL 156 Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212 P ++ +++ +VE++ + +A MS R L+RL +KE G++F WR +++L Sbjct: 157 PTTNDERLQKVVELLMSDVSSKQTIDYYAELSFMSSRTLSRLFIKELGMNFSDWRTRMKL 216 Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 + A++ L + +++++A LGY++ +AFI MFKK LG+TP YI Sbjct: 217 LEAIKRLGEKQSIKEIALDLGYETASAFIYMFKKHLGKTPSNYI 260 >UniRef50_Q4K6D5 Transcriptional regulator, AraC family n=8 Tax=Pseudomonas RepID=Q4K6D5_PSEF5 Length = 272 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 85/258 (32%), Positives = 130/258 (50%), Gaps = 7/258 (2%) Query: 13 DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72 D H V+ D P+H+HR+ Q + A G + W++PP AVWIP Sbjct: 19 DHFHHGPVSAYPRDYPDAAHQPLHRHREAQFLYAACGTMRLVTAQGAWVIPPSRAVWIPP 78 Query: 73 GVEHSNQVTANAELCFLFIEPSAVTMPT--TCCTLKISPLCRELILTLANRTTTQRAEPM 130 VEH + + LFI+P ++ P CC L ++PL RELIL A + Q P+ Sbjct: 79 LVEHEIFMVGEVRMRSLFIDPE-LSAPALRQCCVLAVTPLLRELILR-AVQGPEQAENPL 136 Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190 + Q++ +E+ LH+P+ +++ + + + P L WA S R Sbjct: 137 IQ---QLMLEEIAALENLPLHIPMPQDRRLQAICRTLIQTPDHPHTLEDWAQQVGASSRT 193 Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250 LARL ++ ++F WRQQ++L+ AL L+ G++V VA +LGY S AF MF + LG Sbjct: 194 LARLFQQQVQMNFNAWRQQVRLMEALPRLLAGESVHNVADSLGYGSARAFSAMFCRLLGD 253 Query: 251 TPGRYIARLTTVSPQSAK 268 TP Y+A L +S +A Sbjct: 254 TPRHYVAALNQLSAINAS 271 >UniRef50_D0B292 Transcriptional regulator n=40 Tax=Rhizobiales RepID=D0B292_BRUME Length = 289 Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 77/232 (33%), Positives = 119/232 (51%), Gaps = 1/232 (0%) Query: 29 DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88 D P H H + QL+ A G + T + WM+P +A+WIP GVEHS + + + Sbjct: 44 DGYFVPRHSHSRAQLLCASQGVVLVTTDAGRWMIPSDHAMWIPAGVEHSVAILGDVFMRS 103 Query: 89 LFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147 ++I A++ +P + ++ L R LI+ + + E +I+++ +L P+ Sbjct: 104 IYISVDAISGVPNYLHVVGLTDLMRCLIIDATSHDSIPAPESRDGLVIELILRDLHTLPE 163 Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207 L LP S P+++ + K P + +WA AMS R+ R +ETG+S WR Sbjct: 164 YPLGLPFPSDPRLQKLCRDFVKKPSSRATIDEWADRMAMSRRSFTRHFQRETGVSLSVWR 223 Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 QQ L A+ L +G+ V VA LGYDS +AF TMF++ LG P Y RL Sbjct: 224 QQACLFAAVPRLSEGEPVTSVALDLGYDSVSAFTTMFRRMLGVPPKFYQPRL 275 >UniRef50_Q7D3B7 Transcriptional regulator. AraC family n=2 Tax=Agrobacterium tumefaciens RepID=Q7D3B7_AGRT5 Length = 264 Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 71/208 (34%), Positives = 115/208 (55%), Gaps = 1/208 (0%) Query: 46 ALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCT 104 AL G + VE ++ PP YA WIP H+ N + ++I+ MP T CT Sbjct: 40 ALTGVMEARVEGKRFLCPPHYATWIPADAVHACHNRENVKFVSIYIDRDLCAGMPETACT 99 Query: 105 LKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMV 164 L +SPL + ++ A R T RRL VL D+L P+++ LPVS+ ++ ++ Sbjct: 100 LALSPLIKAILADFAERRITVPQTEADRRLAFVLVDQLLNAPRRESFLPVSNDDLLQPVI 159 Query: 165 EMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDT 224 + + P + +L +WA +E+ L+R + G+SF +WRQ+L+L+ +L + G + Sbjct: 160 DALQADPGDRRSLSEWARLLQTTEKTLSRRFLGHLGVSFNEWRQRLKLVASLSLIEDGKS 219 Query: 225 VQKVAHTLGYDSTTAFITMFKKGLGQTP 252 VQ +A TLGY+S +AFI MF++ G +P Sbjct: 220 VQSIAKTLGYNSPSAFIAMFRRLTGTSP 247 >UniRef50_A0AX10 Transcriptional regulator, AraC family n=6 Tax=Burkholderia RepID=A0AX10_BURCH Length = 277 Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 1/229 (0%) Query: 31 LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLF 90 + P H HR+GQLI A+ G + + W+VP AVW+PGG +H + + ++ +F Sbjct: 48 MAYPPHSHRQGQLIHAISGVMIVHADAGSWVVPTGRAVWVPGGTQHEIRSAGDVQMRTVF 107 Query: 91 IEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ 149 + P ++PT C +++ L RELI+T + R++ ++ DE+ P Sbjct: 108 VGPEVRPSLPTECRVIEVGTLLRELIVTACDLPADYDLSHRAGRVLALILDEIEIAPSLS 167 Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209 LH+P+ HP + + + P L WA M+ER LAR +ETG++ W + Sbjct: 168 LHVPMPRHPALVALCTRLINDPSSVVTLQAWARDAHMNERTLARAFKRETGMTHGAWCRH 227 Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 +L+++L L G + ++A GYDS +AF MF+K LG P Y R Sbjct: 228 ARLLLSLPRLAAGTPILELALEHGYDSPSAFAAMFRKALGVAPSEYFRR 276 >UniRef50_C1DH76 Transcriptional regulator, AraC-family n=3 Tax=Proteobacteria RepID=C1DH76_AZOVD Length = 296 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 112/223 (50%), Gaps = 1/223 (0%) Query: 34 PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93 P H HR+GQL+ G + W +PP A W+P G+ H + AEL ++ Sbjct: 51 PEHSHRRGQLMFVTSGGLRVQTRRGYWTIPPGRACWVPCGLNHIAEYPQAAELAVAYVRT 110 Query: 94 SAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152 M P+ C L + L REL++ + + R + VL E+ +Q L + Sbjct: 111 DLCEMLPSDCRVLNLGALLRELVIAAYDFGWDYGIDSHEARAMLVLIGEIGRQSSAPLFI 170 Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212 P ++R + + + P + +L +WA S R LARL ETGLSF QWRQQL L Sbjct: 171 PEGRDNRLRRVTAFLHRHPDDKRSLEEWASQVGASARTLARLFRSETGLSFSQWRQQLHL 230 Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 A++ L++G +V +VA+ LGY S +F MF + +G+ P Y Sbjct: 231 TRAVEMLLEGASVTQVAYALGYASPGSFSAMFARSMGEPPSLY 273 >UniRef50_Q2SP75 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SP75_HAHCH Length = 275 Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 78/251 (31%), Positives = 126/251 (50%), Gaps = 3/251 (1%) Query: 10 YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69 Y P R VA + +P H+H QLI A G + + +W++PPQ AVW Sbjct: 22 YMPIRGERPIVARAREFPSGYRVTP-HKHECCQLIFATSGVMELVTDEGIWLIPPQRAVW 80 Query: 70 IPGGVEHSNQVTANAELCFLFIEPSA--VTMPTTCCTLKISPLCRELILTLANRTTTQRA 127 +P VEH + + L ++I+P A V+ P TL+ISPL RELI+ + Sbjct: 81 MPPNVEHGMRARGDVSLRTMYIQPHACPVSFPQKPRTLQISPLLRELIIRAMRVPSNYDE 140 Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187 R++ ++ +E+ ++ L LP + +++ + + P + L W+ S Sbjct: 141 GGRDGRIMSLILEEIEWSGERPLRLPATRDSRLQNLCRAILANPADPRELKDWSTVIGAS 200 Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247 ER L+RL E G+S++ WRQQ+ + A+ L GD V +A LGY++ +AF MF++ Sbjct: 201 ERTLSRLFRNELGVSYQYWRQQVAALNAIPRLAAGDPVTLIAADLGYETPSAFSAMFRRI 260 Query: 248 LGQTPGRYIAR 258 +G P Y R Sbjct: 261 MGVAPSLYFQR 271 >UniRef50_Q7W072 Probable transcriptional regulator n=3 Tax=Bordetella RepID=Q7W072_BORPE Length = 286 Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 78/240 (32%), Positives = 125/240 (52%), Gaps = 4/240 (1%) Query: 18 AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77 AA+A AGT S +H+H +GQL+ A+ G +T + W+V P A+WI GV H Sbjct: 40 AALATDYPAGT---VSSLHRHDRGQLLYAMSGVVTVITDLGSWVVAPGQALWIAPGVLHQ 96 Query: 78 NQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136 + + + L+I+P+ A +P C T+++SPL + LIL + Sbjct: 97 TRGFESVAIRSLYIDPAHADGLPAACQTIQVSPLLQALILEAVKLPPQDAGSERAGHIRA 156 Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196 ++ DE+ L++P+ ++ + + + + P G+L WA + +S RNL RL Sbjct: 157 LILDEMRHVCAAPLYVPMPRDARLARICQALLRDPANAGSLDAWAAYGGLSRRNLTRLFR 216 Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 +TG SF WRQ++ L+ AL L +G+ + VA LGY S AF MF++ LG +P Y Sbjct: 217 AQTGASFNAWRQKVLLMEALARLSRGEQITAVALDLGYGSPGAFTAMFRRALGVSPREYF 276 >UniRef50_D1XHM7 Transcriptional regulator, AraC family n=1 Tax=Streptomyces sp. ACTE RepID=D1XHM7_9ACTO Length = 271 Score = 140 bits (353), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 83/233 (35%), Positives = 122/233 (52%), Gaps = 10/233 (4%) Query: 27 GTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL 86 G DE T P H+H +G L+ G ++ W+ P VWIP G EH ++ ++ Sbjct: 24 GHDERT-PEHKHTRGHLVYPATGVLSLVTSVGSWIAPSNRVVWIPAGFEHRHRAHGRTDM 82 Query: 87 CFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 +F+ PS A +P L ++PL RE LTL +R RL +V+ D++ Sbjct: 83 RIVFMAPSLAALLPAHPAVLVMTPLAREATLTLTG--AERRPAGARSRLRRVIIDDITTA 140 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKG---PVEWGALGQWAGFFAMSERNLARLIVKETGLS 202 P+Q LHLP ++R +V ++ +G P+ G LG G ER L+RL +ETG+S Sbjct: 141 PEQPLHLPEPRDDRLRAVVALVEEGMSDPLTLGRLGHEVG---AGERTLSRLFQRETGMS 197 Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 F QWR QL++ AL L G +V A G+ + +AFI F +GQTPG+Y Sbjct: 198 FPQWRTQLRVHHALLLLADGGSVINTATACGWANPSAFIDAFTALVGQTPGQY 250 >UniRef50_B7UVC2 Probable transcriptional regulator n=6 Tax=Pseudomonas aeruginosa RepID=B7UVC2_PSEA8 Length = 260 Score = 140 bits (353), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 81/219 (36%), Positives = 127/219 (57%), Gaps = 3/219 (1%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 +H+H GQL+ A G + + E ++VP Q A+WIP V H+ + L+++ S Sbjct: 35 MHEHPWGQLMYAASGTLRASTERHSYLVPAQRALWIPPRVRHAAEACNPVLFRSLYLDRS 94 Query: 95 AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 +P C L++S L REL+L A RL+QV+ DE+ + + L+LP+ Sbjct: 95 ---LPGGCRVLEVSGLLRELLLRAAEFPREYPPGGEAERLMQVVADEVGRLREAPLNLPL 151 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 P++R + + + P + + WAG S R LARL ++T LSFR+WRQ+L+L+ Sbjct: 152 PGDPRLRRITDALQADPADPRGISDWAGLVGASRRTLARLFREQTQLSFREWRQRLRLLN 211 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253 A+ L +G +V +VA LGYDST+AFI++F++ GQTPG Sbjct: 212 AVAALEEGASVTRVASDLGYDSTSAFISLFQRHFGQTPG 250 >UniRef50_Q39NN6 Transcriptional regulator, AraC family n=9 Tax=Betaproteobacteria RepID=Q39NN6_BURS3 Length = 266 Score = 140 bits (353), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 78/223 (34%), Positives = 125/223 (56%), Gaps = 1/223 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H+HR+ QL+ A+ G + E A W+VPP VW+ G++H+ Q++ + ++ +F+EP A Sbjct: 44 HRHRRAQLLYAIEGVMHVQSEGASWVVPPTRGVWLEAGLDHTVQMSGDVQMRTVFVEPGA 103 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 V +P C +++ PL RELIL + L+ +L E+ P L+LP Sbjct: 104 VEHLPARSCVVEVHPLLRELILAAVDVPLDYAPGSRHDHLMHLLLAEVTVAPLLPLYLPW 163 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 P++RT+ + + P + + +WA +S R L R +ETGLSFR+WR+Q +L++ Sbjct: 164 PHDPRLRTICDALVAAPDDLRTIAEWADLLGLSVRTLHRAFRRETGLSFRRWREQARLLL 223 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 AL+ L G+ V VA GY S +AF MFK+ G +P + A Sbjct: 224 ALKRLAHGEKVLTVAMDHGYSSQSAFSAMFKRHFGVSPSAFYA 266 >UniRef50_A0NPK3 Probable transcriptional regulator protein, AraC family protein n=2 Tax=Rhodobacteraceae RepID=A0NPK3_9RHOB Length = 262 Score = 140 bits (352), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 117/222 (52%), Gaps = 1/222 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H QL + G+I E + VPP+ AVW+P V H + + EL +++++ Sbjct: 35 HSHDAAQLFHVIRGSIAIDTEMGTYFVPPERAVWLPPRVSHQTRYLTDTELRYIYVQYDY 94 Query: 96 V-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 +P T ++++ L R LIL + ++ + R+ V+ D+L P L LP+ Sbjct: 95 TRDLPKTPQVMQVTTLLRALILEFMSYPRSETDKGPAARIAAVILDQLKMLPVAPLQLPM 154 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 ++R + E + + P +L + A A S R+ R I ETGLS+R W +Q++L Sbjct: 155 PQDARLRDLCEGVVRCPAHIPSLSEAADRCATSVRSFERRIKAETGLSYRTWCRQVKLFR 214 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 AL+ L G +V V+H LGY+ +AF++ FKK G TPGRY Sbjct: 215 ALELLASGRSVSDVSHKLGYEGPSAFVSTFKKAFGVTPGRYF 256 >UniRef50_B3RAF2 Putative Transcriptional Regulator, AraC family n=1 Tax=Cupriavidus taiwanensis RepID=B3RAF2_CUPTR Length = 265 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 74/219 (33%), Positives = 117/219 (53%), Gaps = 1/219 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H+H Q AL G + + ++ PPQ+AVWIP GV H + + L+++ S Sbjct: 34 HRHPWCQFAYALQGVLEVWTDRGRFVAPPQWAVWIPAGVAHRVRCATGTRIRSLYLDNSV 93 Query: 96 VTMPTTCC-TLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 + C L +SPL RELI ++ RL +VL D+L P+ + LP+ Sbjct: 94 CAAARSRCRVLTVSPLLRELIRAFSHLPAEYDERGADGRLARVLLDQLGAAPEVEFMLPL 153 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 + P++R + + + +L W+ A+S + L RL V+ETGL+FR WRQ+L+L+ Sbjct: 154 PADPRVRLVCNGLQRHADRDTSLAAWSMRLAISGKTLTRLFVRETGLTFRAWRQRLRLLD 213 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253 A+ L +G+ V +VA GY+S +AFI F++ TPG Sbjct: 214 AVPRLERGEAVTEVALDCGYESLSAFIAAFRRLYNMTPG 252 >UniRef50_Q39GD4 Transcriptional regulator, AraC family n=7 Tax=Betaproteobacteria RepID=Q39GD4_BURS3 Length = 278 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 74/224 (33%), Positives = 112/224 (50%), Gaps = 1/224 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H +GQ+ G + W++PP A WIP G +H ++ + I P+A Sbjct: 51 HSHLRGQVFCVESGFAHVRTPHGSWLLPPHRAGWIPPGEQHKVSISGALSGWSVVIAPAA 110 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 MP C + I+ L R L+ + R + R+ VL DE+ + P + LHLP+ Sbjct: 111 SRRMPDQPCVIAITELMRALVRRAVSWADQDRLDIEQARISIVLLDEMRRAPHEPLHLPM 170 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 ++ + + P + L WA + +S R L+RL V ETG SF QWRQQ +L Sbjct: 171 PRDRRLLRIANAILGQPHDSRTLEAWAEWAGLSARTLSRLFVAETGTSFAQWRQQARLTH 230 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 AL+ L GD+V +A LGY + + FI MF++ G +P Y A+ Sbjct: 231 ALERLASGDSVANIADALGYATPSNFIAMFRRAFGDSPAHYFAK 274 >UniRef50_Q2K0F2 Probable transcriptional regulator protein, AraC family n=6 Tax=Rhizobium etli RepID=Q2K0F2_RHIEC Length = 278 Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 114/227 (50%), Gaps = 3/227 (1%) Query: 32 TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91 T H H + QL + G++ E ++VPP+ AV++P GV H E +LF Sbjct: 36 TYSFHAHHRAQLFQIVRGSLRLETERGYFIVPPERAVFVPSGVLHEVTYLQETERSYLFF 95 Query: 92 EPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150 P AV +P+ + +PL RE IL RL+ V+ D+L P L Sbjct: 96 RPDAVVNLPSQVSVIGTTPLLRETILAFLEIPRADAGSARAERLVAVILDQLQTSPVAPL 155 Query: 151 HLPVSSHPKIRTMVEMMAKGP-VEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209 LP + ++R++ + P +W L + A AMS R+ R ETG+SFR WRQQ Sbjct: 156 SLPSPASERLRSIASDIRNEPGADW-PLDELASRAAMSPRSFQRHFHTETGMSFRAWRQQ 214 Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 +L+ A++ L G +V +A +LGY +AFI +F+ G +PG+Y Sbjct: 215 AKLLKAVEWLAAGRSVGDIAFSLGYSGPSAFIAVFRTAFGVSPGQYF 261 >UniRef50_Q13ID0 Transcriptional regulator, AraC family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13ID0_BURXL Length = 263 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 3/223 (1%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H+H QL L G++ T E +W V AVWIP GV+H + E +FI+P Sbjct: 36 HRHNWSQLTCPLKGSMRVTTERQVWTVTSFRAVWIPPGVDHELTMVGATEFHAVFIDPQH 95 Query: 96 VTMPTT-CCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 +P CC + +SPL REL+ L A +RRL VL +E+ + ++ L + Sbjct: 96 SPLPANQCCVVDVSPLMRELMQWLG--ADYGPATDHSRRLTDVLLEEVRRATRRTSALVL 153 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 +++++ E + + P LG+WA SER LARL E G +F WRQQL+L Sbjct: 154 PGDRRLKSLCEALMEDPGSTLTLGEWAHRTGASERTLARLFQIELGTTFGAWRQQLRLSC 213 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 A+ L G ++ ++A LGY + AF TMFK+ G P RY A Sbjct: 214 AVDLLRSGLSLSRIAADLGYADSAAFSTMFKRAFGVAPSRYHA 256 >UniRef50_D0J7G0 Transcriptional regulator, AraC family n=11 Tax=Proteobacteria RepID=D0J7G0_COMTE Length = 274 Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 71/224 (31%), Positives = 120/224 (53%), Gaps = 1/224 (0%) Query: 33 SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92 +P H HR G L A HG+++ V + PPQ+ VWIP GV HS + + +++ Sbjct: 42 APPHSHRWGHLNYAAHGSLSMDVPTGHILCPPQHGVWIPPGVVHSCYLQHAVQYRSVYLA 101 Query: 93 PS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151 P +P T +++ P+ + ++ R RL +V+ D+L P + Sbjct: 102 PDLCADLPQTAGCMRLGPIVKAVLADFGARGVQIPVTDADLRLARVVHDQLRATPLELSF 161 Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211 LPV+ HP + +++ M P + +L +WA M+ER LAR +E G+S +WRQ+++ Sbjct: 162 LPVARHPALVQVLDAMQSRPDDHRSLAEWAETVHMTERTLARHCQRELGMSLGEWRQRMR 221 Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 + A+ L G TVQ++A+ LGY + +AFI MF++ G P ++ Sbjct: 222 YLQAIDALEAGHTVQQIAYDLGYSTPSAFIAMFQRESGLPPEQF 265 >UniRef50_A7K1S8 Transcriptional regulator AraC family protein n=4 Tax=Vibrionaceae RepID=A7K1S8_VIBSE Length = 264 Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 116/223 (52%), Gaps = 1/223 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE-LCFLFIEPS 94 H H +GQL+ G I + W++PP A WIP G HS + + LF S Sbjct: 38 HSHHRGQLLCIDEGLIQVKTDEGAWILPPHRAGWIPPGAMHSVYFCGSLKGRSLLFTPES 97 Query: 95 AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 P C +++S + + L + + + T + R++ V+ DE+ P + LH+P+ Sbjct: 98 CERFPMRPCVIQMSDVLKALSVRASIWSKTDELSIQSLRILAVISDEIVNSPHESLHIPL 157 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 P+++ + + + P ++ WA A+S R L RLI E +SF +WRQQ LI Sbjct: 158 PRDPRLQKVTQAILIDPNSKHSVEHWAKIGAVSSRTLRRLIRSELNMSFSEWRQQALLIH 217 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 +L+ + +G++V VAH LGY + + FI MF++ G +P RY + Sbjct: 218 SLEMMARGESVGAVAHALGYSTPSNFIAMFRRVYGDSPTRYFS 260 >UniRef50_A4WDQ0 Transcriptional regulator, AraC family n=18 Tax=Gammaproteobacteria RepID=A4WDQ0_ENT38 Length = 254 Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 121/227 (53%), Gaps = 3/227 (1%) Query: 32 TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91 + P HQH QL+ +L G + W+VPP VW+P G +H+ ++T N LFI Sbjct: 26 SEPYHQHDCAQLLHSLSGVVRVDTVAGCWVVPPGRGVWLPAGTQHAIRITGNVAARTLFI 85 Query: 92 EPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150 +P A +P +C ++ISPL RELI+ + + R+ +++ DE+ P Sbjct: 86 DPLARADLPASCQIVQISPLLRELIVASLDLPESYSPGSRDERVYELILDEIRTMPVLPF 145 Query: 151 HLPVSSHPKIRTMVEMMAKGP-VEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209 HLP + + + + + P + W + Q A +MSER L R ++TGLS+ +W ++ Sbjct: 146 HLPEPQSEPLHQLCQQIRQDPGLAWSS-AQAASLTSMSERTLNRHFQQQTGLSYGEWTRR 204 Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 +L+ AL L +G V +VA LGY S +AF MF++ +G +P Y Sbjct: 205 ARLVEALLRLAQGQPVLRVALDLGYGSHSAFTAMFRRVMGISPSDYF 251 >UniRef50_Q11DK3 Transcriptional regulator, AraC family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11DK3_MESSB Length = 262 Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 66/236 (27%), Positives = 119/236 (50%), Gaps = 1/236 (0%) Query: 33 SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92 P H H + QL +L G + E A +++PP A+WIP GV H N ++I+ Sbjct: 27 DPFHSHERAQLSFSLSGVQSLITETATYVLPPNRAIWIPPGVRHKTHCRENVRFYAVYID 86 Query: 93 PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152 P+ +P C ++S L R LI + +++++L DE+P+ P + + Sbjct: 87 PTLDNLPKECRVFEVSDLVRALIGEIMTFNFAYNEFGREGQIVRLLLDEIPRMPTVDIQI 146 Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212 P+ + +I + M+ + P + + WA M R R+ K+TG++ WR Q++L Sbjct: 147 PMPTDSRILRVCNMLIEQPGDAHDIDYWASVANMGRRTFTRVFKKQTGMALSTWRLQVRL 206 Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY-IARLTTVSPQSA 267 + AL L G ++ VA+ +GY+S +AF ++F + G P Y ++T ++ + A Sbjct: 207 MHALSLLHAGHSITSVAYGIGYESISAFTSVFHRSFGFPPSHYRTGKVTKMTAEKA 262 >UniRef50_Q8L1B2 Transcriptional factor PhcT (Fragment) n=1 Tax=Comamonas testosteroni RepID=Q8L1B2_COMTE Length = 246 Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 1/212 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H KGQL+ A G + + W+VPP A+WI G+ H+ + + + +I+ + Sbjct: 35 HSHPKGQLLYATEGVMVVHTDAGSWIVPPNRALWITTGLRHTVTMAGDVLMRTAYIDAAK 94 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 VT +P + +SPL REL++ + RL+++L DE+ LHLP+ Sbjct: 95 VTTLPHESSVINVSPLLRELLVEAVRIAFHTEPKGRDARLLELLIDEIRVSTTLPLHLPM 154 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 ++R++ + ++ P + +WA + ER L RL KETG++F QWR+Q +L+ Sbjct: 155 PKDGRLRSICDQLSATPSDSSNAAEWAASIHVGERTLHRLFAKETGMTFAQWREQARLLH 214 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKK 246 AL+G+ G+ V +VA GY S +AF MF++ Sbjct: 215 ALRGIAAGNKVIEVALDCGYGSASAFAAMFRR 246 >UniRef50_Q2BIT2 Transcriptional regulator, AraC family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIT2_9GAMM Length = 262 Score = 137 bits (344), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 75/239 (31%), Positives = 118/239 (49%), Gaps = 3/239 (1%) Query: 20 VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79 + + + + ++ P H G+ + + G + E + VPP + +W P G EH Sbjct: 20 IYYFLRSMPEDTIYPAQTHPWGEFVFSFSGVLELHAEEQEFRVPPNFGLWHPAGTEHQGG 79 Query: 80 VTANAELCFLFIEPSAVT---MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136 +E C L+I+ T MP T C L +SP+ RE+++ L N RL+ Sbjct: 80 NRNASEHCSLYIDDELATKRGMPKTSCALLVSPMLREMLIHLRNHFPKPPYTEQESRLLD 139 Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196 V+ D+L P +LP S P I ++ + P ++ A F MSER LAR Sbjct: 140 VILDQLIVTPIAGNYLPDSKDPLITQVLAYLKDDPGANHSIRAIAEQFGMSERTLARKAQ 199 Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 E + +WRQ+L+++ A+ L +G +V+ VA LGY + +AFI MFK+ LG TP Y Sbjct: 200 SELNMPLSEWRQRLKVVRAVPMLQEGTSVESVALDLGYSTASAFIAMFKRLLGTTPDEY 258 >UniRef50_Q221Z0 Transcriptional regulator, AraC family n=9 Tax=Proteobacteria RepID=Q221Z0_RHOFD Length = 273 Score = 137 bits (344), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 118/223 (52%), Gaps = 1/223 (0%) Query: 34 PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93 P H+H G+ + + G + + + ++ PPQY +W+P VEH A C L+I P Sbjct: 38 PQHRHAWGEFVYSFSGVMEVKLADHHYLAPPQYGIWLPPDVEHVGLNRYEAVHCSLYIAP 97 Query: 94 SAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152 +P C L +SPL R L+ L + Q RL++VL D+L P +L Sbjct: 98 QGCGNLPRAACALTVSPLVRALLEHLRQQPPEQPGTLQDERLLRVLVDQLALAPCAGSYL 157 Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212 P S + ++ M+ + P + +L + A +ER L R ++ G+SF +WRQ+L++ Sbjct: 158 PSSDDALLGAVLRMLEEQPGDNRSLPELAHAVHTTERTLMRRARRDLGMSFVEWRQRLRV 217 Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 + A+ L G TV+ +A LGY S +AFITMFK+ +G TP + Sbjct: 218 VKAMPLLEAGQTVETIALDLGYGSASAFITMFKRLVGTTPDEF 260 >UniRef50_Q2RRF5 Transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria RepID=Q2RRF5_RHORT Length = 247 Score = 136 bits (342), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 80/224 (35%), Positives = 114/224 (50%), Gaps = 3/224 (1%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE--LCFLFIEP 93 H H QL+ A+ G W+VPP AVW+P G+ H + + ++ IE Sbjct: 23 HSHPWCQLVYAIGGVTIVETPEGSWVVPPDRAVWVPAGITHCVRAARGGQNRSVYVTIEA 82 Query: 94 S-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152 + A +P C + +SPL RELIL R + RL++VL D++ P Q LHL Sbjct: 83 AQAAGLPKGCKVVAVSPLTRELILEFGRRPDDYDEDGADGRLVRVLLDQIAALPAQPLHL 142 Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212 P P+ + + P + L +WA S R LAR + GL+F QWR +L+L Sbjct: 143 PWPRDPRALAVARALEADPADGRPLEEWAREAGASARTLARTFRADCGLTFGQWRLRLRL 202 Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 + AL+ L G+ V VA +GYD +AFI MF++ LG TPG Y Sbjct: 203 LGALERLAAGEAVTAVAFDMGYDQPSAFIAMFRRLLGTTPGAYF 246 >UniRef50_B0RW44 Transcriptional regulator, AraC family n=6 Tax=Xanthomonas RepID=B0RW44_XANCB Length = 329 Score = 136 bits (342), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 77/227 (33%), Positives = 122/227 (53%), Gaps = 5/227 (2%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H +GQL+ G +T E+ +PP A W+P G +H+ ++ + + P A Sbjct: 89 HAHVRGQLMYVEQGVLTVHTEHGTSSLPPGCAGWMPPGQQHTVELAGPLRGWGVVVRPDA 148 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQR----AEPMTRRLIQVLFDELPQQPQQQL 150 T +P +++S L RE+I+ A+ ++ +P +RL VL DEL Q P + L Sbjct: 149 CTGLPARSGVIRLSGLAREVIMRAASWPLSEMLGEPVDPARQRLAAVLLDELCQAPIEHL 208 Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210 HLP+ + ++ + + P + L WA + +S R+L+R ETGLSF QWRQQ Sbjct: 209 HLPMPADRRLLRIARQLLDTPADPRPLDVWATWGGLSPRSLSRHFRDETGLSFAQWRQQA 268 Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 +L L+ L +G V +VA LGY S +AF+++F + G P RY+A Sbjct: 269 RLAEGLRRLSQGTAVAQVADQLGYSSPSAFVSVFHRHFGAPPARYLA 315 >UniRef50_Q7MFB7 AraC-type DNA-binding domain-containing protein n=32 Tax=Gammaproteobacteria RepID=Q7MFB7_VIBVY Length = 287 Score = 136 bits (342), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 74/225 (32%), Positives = 117/225 (52%), Gaps = 1/225 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H GQ+ L G + + ++ PP A+W+P G+ H + E C L I Sbjct: 62 HSHTWGQVQLISGGILEMEAQGTRFLAPPHLAIWVPPGIMHRSFNRRPLEYCSLNIAKQL 121 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 P C ++++P+ +I R E +RL+QVL D+L + Q LP Sbjct: 122 TDKFPGKTCLIQVTPIVSAIIDDFRLRDINVATEESDKRLVQVLLDQLATKETQHHFLPS 181 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 S H + ++ + + P + +L +WA +ER LAR E G+SF +WR +++ + Sbjct: 182 SDHKYLAPILAHVEENPTDTTSLSEWAEKVHTTERTLARHCQSELGMSFTEWRLRVRYLY 241 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 +++ L KG TV++VA TLGY+ + FI+MFKK GQTP +Y RL Sbjct: 242 SMELLRKGQTVKEVALTLGYNQASPFISMFKKYSGQTPEQYKNRL 286 >UniRef50_Q0B9P3 Transcriptional regulator, AraC family n=14 Tax=Proteobacteria RepID=Q0B9P3_BURCM Length = 322 Score = 136 bits (342), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 76/234 (32%), Positives = 114/234 (48%), Gaps = 6/234 (2%) Query: 26 AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85 AGT T P H H +GQ A G I+ + + W+VPPQ A W+P GV H +T Sbjct: 88 AGT---TFPEHAHGRGQFAFASRGTISVSTPHGRWLVPPQRACWVPPGVRHEMTMTGAVT 144 Query: 86 LCFLFIEPSAVT---MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDEL 142 + F+ A +P C +SPL R+LI + +L+ +L E+ Sbjct: 145 MLNTFVSDDAARAAGLPDQCGVYGVSPLLRQLIDDAIELPAMYDVDGRAGKLMALLVAEI 204 Query: 143 PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202 P+ LH P+ + ++ ++ + P L Q A +S R RL +TG+S Sbjct: 205 ATMPRLSLHAPLPADARLASICRHLFASPSIAADLDQVATHAGVSRRTFTRLFRAQTGVS 264 Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 F WRQQ+ ++ A+ L G V +VA LGY S +AF + F++ LG TP RY+ Sbjct: 265 FAAWRQQVCMLAAITRLSDGQPVTRVAFELGYASASAFTSAFRRILGDTPSRYL 318 >UniRef50_C7MAZ5 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=2 Tax=Actinomycetales RepID=C7MAZ5_BRAFD Length = 261 Score = 136 bits (342), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 83/247 (33%), Positives = 123/247 (49%), Gaps = 4/247 (1%) Query: 27 GTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL 86 G DE T P H H +G L+ G ++ E+ W+ PP A WIP G H ++ ++ Sbjct: 18 GHDERT-PSHVHEQGHLVYPASGVLSIVTEDGSWIAPPNRAAWIPAGSFHQHRAHGATDM 76 Query: 87 CFLFI-EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 +F+ + +A +P L ++PL RE TLA + R RL +V+ D+L Sbjct: 77 RIVFMADAAAGLLPAHPSVLAVTPLAREA--TLALTSDVPRTAESRERLRRVIIDDLTAA 134 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 P+Q LHLP ++R + ++ + + L Q ER L+RL + TG+SFRQ Sbjct: 135 PEQPLHLPEPRDERLRALTHLVEQEMEDPATLEQLGRRIGAGERTLSRLFQQTTGMSFRQ 194 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ 265 WR QL++ AL L G +V A G+ + +AFI F +GQTPGRY L S Sbjct: 195 WRIQLRIHRALLLLTDGLSVVDTATACGWANPSAFIDAFTALVGQTPGRYQRSLRGASSP 254 Query: 266 SAKPDPR 272 + PR Sbjct: 255 LPETPPR 261 >UniRef50_A3D530 Transcriptional regulator, AraC family n=12 Tax=Gammaproteobacteria RepID=A3D530_SHEB5 Length = 283 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 79/238 (33%), Positives = 123/238 (51%), Gaps = 3/238 (1%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS- 94 H H +GQL+ A G + ENA+W+VP +AVWIP + H +A ++I+PS Sbjct: 42 HSHPRGQLLWAAKGLLRVRSENAVWVVPSTHAVWIPCNLPHQVNSETHAHTRNIYIDPSY 101 Query: 95 -AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153 ++ T + ++ L REL+L L + + + RL V DEL HLP Sbjct: 102 DVRSLDTQVVMVTMTALMRELVLKLCESSHLMNSGQL-HRLGLVAIDELETLDSLDAHLP 160 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 S P++ +++ + + P L + A S R + RL ETGL++RQWRQ+ +L+ Sbjct: 161 AGSDPRLSRLIQKLIRHPTVNYTLTELAEMGGASVRTIERLFKAETGLTYRQWRQRFRLL 220 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSAKPDP 271 +L+ L +G++ +VAH+LGY S ++F FK G TP Y S + PDP Sbjct: 221 NSLESLSQGESTTRVAHSLGYLSVSSFSAAFKMQFGCTPQDYPQHKPMKSKVNWFPDP 278 >UniRef50_C3KCF4 Putative transcriptional regulator n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KCF4_PSEFS Length = 257 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 71/224 (31%), Positives = 114/224 (50%), Gaps = 1/224 (0%) Query: 34 PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93 P H H K QL+ A+ G + W VPP +W+P G HS + ++ +F+ P Sbjct: 33 PDHSHEKHQLLYAIEGVMVVYSALNQWTVPPNRGIWMPSGQVHSLRCVGTLKMRSVFVRP 92 Query: 94 SAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152 MP T+ ISPL ELI + + R++ ++ DEL P L L Sbjct: 93 DRFPNMPGEPKTVSISPLLSELIKASVSLKPPYAEDSREARIMHLILDELAILPALPLAL 152 Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212 P + P+I+ + + P + + W+ + + + RL K TG++F QWRQQ +L Sbjct: 153 PQPADPRIKQICLALQDDPGDASTVADWSARLNLDQTTIQRLFRKATGMTFGQWRQQARL 212 Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 ++AL+ + G+ V +A LGY+S +AF +MFKK G+TP ++ Sbjct: 213 LLALERIAVGEKVIDIALELGYESPSAFTSMFKKQFGKTPSQFF 256 >UniRef50_Q3JQZ2 Transcriptional regulator, AraC family n=59 Tax=Burkholderiales RepID=Q3JQZ2_BURP1 Length = 450 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 83/251 (33%), Positives = 127/251 (50%), Gaps = 8/251 (3%) Query: 10 YEPDRHHEAAV-AFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAV 68 + P R H V A I AG + P H H QL A G + + WMVPP A+ Sbjct: 185 FAPTRSHPMRVRARAIAAG---MRVPPHAHAWAQLAYASRGVLRLATAGSTWMVPPSRAI 241 Query: 69 WIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCC-TLKISPLCRELILTLANRTTTQRA 127 W+P + H + +A L L+++ SAV C +++S L RELI+ L R+ + Sbjct: 242 WVPPRIAHEVVIVEDAYLRTLYVDESAVPGGLDACRVVEVSGLLRELIVALEARSLNRTR 301 Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187 E R L +++ DEL + L +P+ + ++R + E + P + +L WA S Sbjct: 302 E---RLLAELVLDELTRAEPLPLAVPMPTEKRLRALCEAVLAHPAQGESLEHWAAGVGAS 358 Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247 R +ARL +E +SF QWRQQ L A+ L +G + +A+ LGY S +AF MF++ Sbjct: 359 TRTIARLFKQELSVSFSQWRQQALLARAIPLLNQGRPLSHIANELGYQSQSAFSAMFRRA 418 Query: 248 LGQTPGRYIAR 258 G +P +I R Sbjct: 419 FGASPRAFIQR 429 >UniRef50_B1JZJ0 Transcriptional regulator, AraC family n=2 Tax=Burkholderia cenocepacia RepID=B1JZJ0_BURCC Length = 261 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 81/227 (35%), Positives = 115/227 (50%), Gaps = 8/227 (3%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 HQHR GQL+ A G + W +PP AVW+P V+H + LC +++EP Sbjct: 36 HQHRHGQLVFAAKGVVRVLTPARTWTLPPSRAVWLPSDVDHELHAVGDTALCSVYMEPEV 95 Query: 96 VTMP-TTCCTLKISPLCRELILTLAN----RTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150 P + +S L REL LT+ + T T RA L++VL E P + + Sbjct: 96 FPWPWEEPAVIAVSALLRELALTVVDGADTYTATSRAGLAASLLMKVL-AETPSLAEPGV 154 Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210 LP ++ + E M P L W F S R LAR + ETGL+F WRQQ+ Sbjct: 155 PLPRDE--RLLKLCEHMMNDPASDLTLDFWGEQFGASGRTLARRLHAETGLTFVAWRQQM 212 Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 ++ A+ L G +V +VA LGY S +AFI MF++ G++P RY+A Sbjct: 213 RVAEAMTRLALGQSVARVAKDLGYRSASAFIVMFRRITGESPQRYLA 259 >UniRef50_Q13M62 Transcriptional regulator, AraC family n=4 Tax=Burkholderia RepID=Q13M62_BURXL Length = 266 Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 83/256 (32%), Positives = 122/256 (47%), Gaps = 7/256 (2%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 MM ++ +G E AF I + L P+ R+ +LI A G + E W Sbjct: 17 MMDTVDPDGVE-------QPAFVIGEHHETLDEPLGAFRRARLIHASAGVLIVRTETGRW 69 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120 +VPP +A+WIP GV H T C L+ AV +P + L L+ A+ Sbjct: 70 VVPPGHALWIPAGVLHRLSATGPVRFCSLYAGADAVPLPFHSIAVVPDRLVAALLSAAAD 129 Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180 + + RL+QVL D LP P L L P+ + + ++ P + L Sbjct: 130 LPHDKPFDEPAARLVQVLLDRLPGLPVAPLGLNWPRDPRALRIADALSSNPADSAVLEDL 189 Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240 A ++ R ARL VKETG +F QWRQQL+L+ A++ L G +V +VA +GY ++F Sbjct: 190 AAAAGVTARTAARLFVKETGQTFGQWRQQLRLLAAVEHLGAGASVTQVAPEVGYSDVSSF 249 Query: 241 ITMFKKGLGQTPGRYI 256 I +F+ G TP RY Sbjct: 250 IAVFRDAFGDTPARYF 265 >UniRef50_B1TGD6 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria RepID=B1TGD6_9BURK Length = 261 Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 78/250 (31%), Positives = 123/250 (49%), Gaps = 5/250 (2%) Query: 10 YEPDRHHEAAVAFC----IHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65 YEP+ + A C I + E S H H++ QL+ GA+T + + P Sbjct: 4 YEPNHVLDLDAASCPIVGIAYESREHDSQWHAHQRTQLLYLTEGAVTLQTAERIGHLAPL 63 Query: 66 YAVWIPGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTT 124 A+W+P GV H + L+ + +P +++S L RELI+ + Sbjct: 64 QAIWLPEGVRHRAVMHGRFAYRSLYFDVQTYRDLPRAAVIIEVSQLLRELIVRVTEWPID 123 Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184 RL+ VL DEL P L+LP+ ++ + + P E L +WA Sbjct: 124 DALTDARTRLVSVLLDELEAAPASPLYLPMPRDRRLGAIANALVDDPSEQRTLDEWADRV 183 Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244 S R LARL V+ETGL++ QWR + +L++A L +G ++ +VAH +GY S +AFI M+ Sbjct: 184 GASARTLARLFVRETGLTYVQWRTRCRLLVAQTRLAEGASITEVAHAVGYASDSAFIAMY 243 Query: 245 KKGLGQTPGR 254 ++ G+ PGR Sbjct: 244 RRLYGEPPGR 253 >UniRef50_Q4KJ22 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria RepID=Q4KJ22_PSEF5 Length = 262 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 72/221 (32%), Positives = 113/221 (51%), Gaps = 1/221 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS- 94 H+H G L + HG + + +M PPQYAVW+P HS + + P Sbjct: 34 HRHPWGCLEYSAHGVMHMEIAGQRFMSPPQYAVWVPPQTPHSFYTAQPINYRAVLLAPEL 93 Query: 95 AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 +P TL IS + + ++ A R +RL QVL D+L Q P +LP Sbjct: 94 CAELPAGGSTLAISEILKAILKDFAARDVQIPEGEADQRLAQVLLDQLRQAPVHTCYLPY 153 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 +S P + +++ + P L WAG +SER LAR V+E G+SF +WRQ+ + + Sbjct: 154 ASSPDLLRVLQALQAEPGNNQPLAHWAGLAHVSERTLARQFVRELGMSFGEWRQRQRFLA 213 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 +++ L ++Q++A +GY S +AFI MF++ G TP +Y Sbjct: 214 SIEALESSRSIQEIAFDMGYSSASAFIAMFQRQAGSTPEQY 254 >UniRef50_D1RUP3 Transcriptional regulatory protein n=2 Tax=Enterobacteriaceae RepID=D1RUP3_SEROD Length = 285 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 76/239 (31%), Positives = 126/239 (52%), Gaps = 6/239 (2%) Query: 24 IHAGTDELTS---PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV 80 I GTD + P+H HR+ QL+ G + W+VPPQ AVW+P + H ++ Sbjct: 41 IAIGTDYPSGHLLPMHSHRRAQLLYGATGVMHVFTHQGNWIVPPQRAVWLPPQMPHEVRM 100 Query: 81 TANAELCFLFIEPSAV--TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL 138 L+IEP+A+ + P C + ++PL R+L++ + + L+ +L Sbjct: 101 VGVTTRS-LYIEPTALLASQPQVCQVVSVTPLMRQLLMAAVDMPLEYDPDGRDGALVFLL 159 Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198 EL Q LH+P+ + ++ + ++ P + +WA MS R +R + Sbjct: 160 LHELAQLQSLPLHIPLPADRRLGELCQLFLLQPNAHDSPQEWATRLYMSIRTFSRFFRAQ 219 Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 TG+SF QWRQ+ +++AL L +G++V +VA LGY+S+ AF TMF++ LGQ P Y+ Sbjct: 220 TGMSFSQWRQRACVVLALAQLTEGNSVTQVALELGYESSAAFATMFRRVLGQAPSCYLG 278 >UniRef50_Q14GY1 Transcriptional regulator araC family protein n=19 Tax=Francisella RepID=Q14GY1_FRAT1 Length = 282 Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 113/226 (50%), Gaps = 1/226 (0%) Query: 33 SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92 S H HR+G++ G + + N W++P A WIP H +++ E +FI Sbjct: 45 SDWHHHRRGKIFCIESGLVHVSTPNGSWVLPSNRAGWIPPNTSHKIRISGIVEGWVIFIH 104 Query: 93 PSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151 P+ +P + + +S + R L L + +++ +E+ P++ LH Sbjct: 105 PNMCDDLPKSSRVIPMSEVLRALALRATEWDKYNNLSLEQEHIAKIICNEIRLAPEEALH 164 Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211 LP+ ++ + + P +L QWA F AMS R L R + ETGLSF +WRQQ Q Sbjct: 165 LPMPKTDRVIKVANAIIDNPSISKSLEQWAAFAAMSPRTLRRAFLSETGLSFSRWRQQAQ 224 Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 L L L K +V +V+ +LGY S + FI MF+K G+TP +Y + Sbjct: 225 LARGLDMLAKDISVTEVSDSLGYASPSNFIAMFRKAFGKTPKQYFS 270 >UniRef50_B9R0N9 Transcriptional regulator, AraC family protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R0N9_9RHOB Length = 279 Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 115/223 (51%), Gaps = 1/223 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE-PS 94 H H QL + G+I E + PP+ AVW+P + H + + E+ F+++ Sbjct: 53 HSHDSAQLFHVVKGSIAIDTEVGTFFAPPERAVWLPPRIAHETRYLTDTEIRFVYVNYDH 112 Query: 95 AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 A +P T ++++ L R LIL + + + R+ V+ D+L P L LP+ Sbjct: 113 AQDLPKTAQVIQVTTLLRALILEFMSYPRAETIDGPAGRIADVILDQLKMLPAAPLQLPM 172 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 PK+R + + + + P AL A AMS R+ R I ETG+++R W +Q++L Sbjct: 173 PQDPKLRDLCDGLVRCPAHVPALADAAARSAMSVRSFERRIKAETGMNYRTWCRQVKLFR 232 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 AL+ L G +V V+H LGY+ +AF+ F+K G TPGRY Sbjct: 233 ALELLAAGRSVSDVSHKLGYEGPSAFVATFRKAFGVTPGRYFG 275 >UniRef50_A3Y5B2 Probable transcriptional regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y5B2_9GAMM Length = 258 Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 72/225 (32%), Positives = 115/225 (51%), Gaps = 2/225 (0%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 +H H QL+ A G + +N + VPPQ A+W+P +H +V A ++ P Sbjct: 33 LHHHIWYQLMYASSGVLNVEYQNQIMFVPPQKAIWLPPNCDHRVRVPVGAHFHSVYFRPD 92 Query: 95 AVT-MPTTCCTLKISPLCRELILTLANRTTTQRA-EPMTRRLIQVLFDELPQQPQQQLHL 152 VT + T L ++PL RELIL + T + + +RL QVL D+L Q L + Sbjct: 93 TVTALGNTSKVLSVTPLVRELILAVGEMTHEDKELDDKDKRLTQVLIDQLSLQADSALSI 152 Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212 + S ++ +V + P +L +WA +S R + R+ KE G+ F++WRQ+++L Sbjct: 153 LIPSDKRLAELVRQIIHTPSNGVSLEEWAQTLNLSSRTITRIFTKEVGMGFKEWRQKVRL 212 Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 + A+ L KG +V +VA +GY S +AF FK+ P Y Sbjct: 213 LEAINLLEKGLSVTQVALEVGYQSPSAFTYAFKQVFDTNPASYFV 257 >UniRef50_A9ISK4 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria RepID=A9ISK4_BORPD Length = 393 Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 80/237 (33%), Positives = 123/237 (51%), Gaps = 3/237 (1%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 +H H +GQL+ +L G ++ + LW+VP A+WIP G+ H+ + ++ P Sbjct: 155 MHHHARGQLLGSLRGLLSVGTGDGLWVVPAAQAIWIPPGMPHNLRSHGPFAGWSAYLAPQ 214 Query: 95 AVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153 A +P C + S L R +L A R+E RL V+ DE+ P+ LP Sbjct: 215 ACAGLPDAVCAMPCSELLRATVLRAA--AGNSRSEAANERLAGVILDEIHALPRSAPGLP 272 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 + P++ + + +A P L WA + AM+ R L R +ETGL F WRQ+L+L+ Sbjct: 273 MPRDPRLLRIAQALADEPGNPRRLEDWARWAAMAPRTLMRRHQQETGLPFGDWRQRLRLM 332 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSAKPD 270 AL+ L G V VA LGYD+ +AFI MF++ G TP RY + + P ++ P+ Sbjct: 333 RALEMLAAGRPVTTVALDLGYDNVSAFIAMFRRAYGTTPARYFDQSRPLPPGASAPE 389 >UniRef50_Q4K821 Transcriptional regulator, AraC family n=22 Tax=Bacteria RepID=Q4K821_PSEF5 Length = 274 Score = 133 bits (335), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 80/225 (35%), Positives = 119/225 (52%), Gaps = 4/225 (1%) Query: 34 PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93 P H+HR+ QL+ G + + + W+VPPQ AVWIP GVEH + L+IEP Sbjct: 41 PRHRHRRAQLLYGATGVMQVSTDQGNWVVPPQRAVWIPPGVEH-EVLMLGVSTRSLYIEP 99 Query: 94 SAVTMPTTCC-TLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152 +A + ++ C + ISPL R+L+L + + LI +L E+ + P LH+ Sbjct: 100 AAAPLDSSGCRVIGISPLLRQLLLEAVDMPLEYDLDGRDGLLINLLLHEIQRCPGLPLHI 159 Query: 153 PV-SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211 P+ + P + +A+ V L WA +S R R +ET +SF QWRQ+ Sbjct: 160 PLPAGGPLLELCRAFLARPDVHQSPL-HWADRLHVSLRTFNRWFRQETDMSFVQWRQRAC 218 Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 +I AL L + V ++A LGYDS AF TMF++ LGQ+P Y+ Sbjct: 219 VIQALARLAAAEPVTRIALDLGYDSPGAFSTMFRRVLGQSPSTYL 263 >UniRef50_Q391T4 Transcriptional regulator, AraC family n=8 Tax=Proteobacteria RepID=Q391T4_BURS3 Length = 288 Score = 133 bits (335), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 77/246 (31%), Positives = 118/246 (47%), Gaps = 3/246 (1%) Query: 13 DRHHEAAVAFCI-HAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 D H +A + A D H+H + QL+ G +LWM+PP A+WIP Sbjct: 36 DYQHAPGIAAVMPKAFPDGFVVAEHRHPRAQLVYTTTGIAEVIASQSLWMIPPHRALWIP 95 Query: 72 GGVEHSNQVTANAELCFLFIEPSAV--TMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129 + H+ + E+ +++P A P + +SPL RELI+ + + Sbjct: 96 PDLPHAMRAHGQLEMRTAYVDPRAYRSATPEQPSLVNVSPLLRELIVRASAFPVEVNPDG 155 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 +IQ++ E+ +Q L LP ++ + + + P + L +WA S R Sbjct: 156 RDDLVIQLMLAEIEWSAEQPLRLPSGQDRRLARVCDAILANPADQRTLTEWADEVGASSR 215 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 LARL ETGLSF QWRQQ ++ A L G +V VA LGY++T+AF T+F++ G Sbjct: 216 TLARLFTAETGLSFSQWRQQARISAARPLLASGRSVIAVAAELGYETTSAFSTVFRRFAG 275 Query: 250 QTPGRY 255 TP Y Sbjct: 276 MTPSAY 281 >UniRef50_Q0KFJ5 Transcriptional regulator, AraC-family n=11 Tax=Proteobacteria RepID=Q0KFJ5_RALEH Length = 291 Score = 133 bits (335), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 81/245 (33%), Positives = 117/245 (47%), Gaps = 2/245 (0%) Query: 13 DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72 DR A +T+P HQH QLI A+HG + W+VPP +W+PG Sbjct: 47 DRSPLPVTAMAADYLPGHVTNP-HQHPHAQLIHAVHGVMVVATTEGQWIVPPTRGMWMPG 105 Query: 73 GVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131 G H ++ ++ +I P A +P C L IS L RELIL + Sbjct: 106 GTTHWIRMVGRVQMRTAYIRPDAAPDLPQRCTVLGISALLRELILAAIDIPLPYAPGTRG 165 Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191 RL+++L DE+ P LHLP + +R + + + P L W + + + Sbjct: 166 ARLMRLLLDEVMLVPSLPLHLPRPADDSLRQICDAITGAPDTALTLADWGSRLGLDPKTI 225 Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251 R +ETG++F QWRQQ +L+ AL+ L G V VA LGYDS +AF TMF++ G Sbjct: 226 QRRFARETGMTFGQWRQQARLLAALEKLAAGSKVVDVALDLGYDSPSAFATMFRRQFGVP 285 Query: 252 PGRYI 256 P + Sbjct: 286 PSAFF 290 >UniRef50_D1X8C9 Transcriptional regulator, AraC family n=2 Tax=Streptomyces RepID=D1X8C9_9ACTO Length = 304 Score = 133 bits (334), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 74/225 (32%), Positives = 113/225 (50%), Gaps = 9/225 (4%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI--- 91 H+H Q++ A G +T T W+ P A+W+P G H+++ +L + + Sbjct: 82 AHRHDDHQIVYAGRGVLTVTTSAGSWVAPATRAIWVPAGTVHAHRAYGELDLHLVGLPVT 141 Query: 92 -EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150 P + PT L +SPL REL++ R P RL VL D+L QQ L Sbjct: 142 ENPLGLETPTV---LAVSPLLRELLIAYTRAEDDDR--PERARLRAVLLDQLRASAQQPL 196 Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210 HLP + P +R + +++ P + L + S+R L+RL + G++F QWR QL Sbjct: 197 HLPTPTTPLLRALCDILRADPADSRTLAELGHLVGASDRTLSRLFRSDLGMTFPQWRTQL 256 Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 +L AL L + V VAH G+ ST+AFI +F++ G TPG + Sbjct: 257 RLHHALILLTERTPVTAVAHQCGWSSTSAFIEVFRRTFGHTPGSH 301 >UniRef50_B4EHM1 AraC family regulatory protein n=5 Tax=Burkholderia cenocepacia RepID=B4EHM1_BURCJ Length = 271 Score = 133 bits (334), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 76/223 (34%), Positives = 116/223 (52%), Gaps = 6/223 (2%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI-EPS 94 H H+ GQL+ G + VE W+ PP A+WIP H+ +V + +LC L++ + Sbjct: 45 HAHQAGQLLFTTRGVLVLDVEGQRWITPPLRAIWIPARTVHAMRVADDVQLCSLYLGDAL 104 Query: 95 AVTMPTTCCTLKISPLCRELILTLANR-TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153 +P T C + +SPL REL +++ + +P+ R + DEL + Q L LP Sbjct: 105 GARLPATLCAMTVSPLLRELATRVSHPFDCSVDHDPLAR----LFADELSELAQTPLTLP 160 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 + ++ + E + + P L A A+S R+LARL ETG+S WRQQL+L Sbjct: 161 LPRDRRLLKLCERLQREPHCELPLDTLARDAALSARHLARLFRSETGMSVAAWRQQLRLS 220 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 M+L L G V + AH +GY S T + FK+ G TP +Y+ Sbjct: 221 MSLALLASGMPVTQAAHQVGYRSPTTYAATFKRAFGVTPSQYL 263 >UniRef50_C3K8M6 Putative AraC-family regulatory protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K8M6_PSEFS Length = 265 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 77/264 (29%), Positives = 128/264 (48%), Gaps = 10/264 (3%) Query: 5 LNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPP 64 + Y+PD +GT P H HR+GQ A GA+ + W+VPP Sbjct: 5 FTFSPYKPDSPEAVVTLREYPSGT---VFPRHTHRRGQFAYASTGALKMFTDLGNWVVPP 61 Query: 65 QYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT---MPTTCCTLKISPLCRELILTLANR 121 Q A+W+PGGV H + + + +++ +A + C +SPL R L+ A Sbjct: 62 QRAIWVPGGVSHEMHMRGDVVMLNTYLDDAAARRAGLQDYCQVFGVSPLLRHLLE--AAL 119 Query: 122 TTTQRAEPMTRR--LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 A P R ++ +L DE+ P+ L P+ S ++ + P + ++G+ Sbjct: 120 AIGPSASPSVRDCCVLTLLIDEIGTMPELPLSAPLPSESRLARSCQRFLDAPTQKISIGE 179 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 A + +MS R R + TG++F WRQQ+ L+ A L G ++ VA LG+ S++A Sbjct: 180 MADWSSMSRRTFTRNFRECTGMTFVSWRQQVCLLEATARLSHGSSITDVAFELGFSSSSA 239 Query: 240 FITMFKKGLGQTPGRYIARLTTVS 263 F ++F++ LG +P RY+A+ S Sbjct: 240 FTSVFRRNLGDSPARYLAKSKAAS 263 >UniRef50_A5F0T8 Transcriptional regulator, AraC/XylS family n=40 Tax=Vibrionaceae RepID=A5F0T8_VIBC3 Length = 263 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 72/225 (32%), Positives = 115/225 (51%), Gaps = 1/225 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H GQ+ L G + E+ ++ PP A+W+P G+ H + E C L I Sbjct: 37 HSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAGIRHRSYNRKPIEYCSLNIASQL 96 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 T P +K++ + +I R +RL+QVL D+L + Q LP Sbjct: 97 TTAFPAKTSLIKVTSIVSAIIDDFRERNINVAQSSEDKRLVQVLLDQLATRETQHHFLPS 156 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 ++H + ++ + + P + L QWA +ER LAR E G+SF +WR +++ + Sbjct: 157 TNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLARHCQAELGMSFTEWRLRVRYLY 216 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 +++ L +G V++VA TLGY+ + FITMFKK G TP +Y +RL Sbjct: 217 SMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTPEQYKSRL 261 >UniRef50_Q47EU9 Transcriptional regulator, AraC family n=4 Tax=Bacteria RepID=Q47EU9_DECAR Length = 273 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/229 (33%), Positives = 112/229 (48%), Gaps = 2/229 (0%) Query: 30 ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89 E+ P H+H QL L G I + W+VP AVWIP +EH + E + Sbjct: 31 EVYVPPHRHDWAQLAYPLRGGIRISAAGMTWLVPALRAVWIPPHIEHDLLMLGEVEFRTV 90 Query: 90 FIEPSAVTMPTTCCT-LKISPLCRELILTLANRTTT-QRAEPMTRRLIQVLFDELPQQPQ 147 +I P +P C+ +++S L R L L+ Q R++ +L E+ + P Sbjct: 91 YIAPEVAPLPLDACSVIEVSDLMRALFEALSEADGDGQEPSLRQRQVTALLLTEIRRAPP 150 Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207 L LP+ +++ + + + P +L +WA SER LARL V E LSF WR Sbjct: 151 LSLGLPMPHDRRLQALCQALIDEPASPLSLAEWAARVGASERTLARLFVSELKLSFGAWR 210 Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 QQL+L AL + +G +VA LGY S AF MFK+ G PGR++ Sbjct: 211 QQLRLARALDLIGRGRPCGEVAAELGYASPAAFSAMFKRAFGVPPGRFM 259 >UniRef50_C4WMA6 AraC family transcriptional regulator n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WMA6_9RHIZ Length = 249 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 86/240 (35%), Positives = 127/240 (52%), Gaps = 3/240 (1%) Query: 19 AVAFCIHAGTD-ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77 A+A A D P H+HR QLI A G +T EN W+VPP AVW+P VEH+ Sbjct: 10 ALAISTIAQDDASFAGPPHRHRDAQLIYARSGVVTVATENGSWVVPPNRAVWVPPMVEHA 69 Query: 78 NQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136 + + +FI P A ++P++C +++S L RELIL L + A P R+ + Sbjct: 70 TRSHGPVQFRTIFIHPDAARSLPSSCGVVEVSSLLRELILRLVE-LQDRPATPFAHRVCE 128 Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196 +L +EL P + L L + S ++RT+ + + P +L A MS R+ R Sbjct: 129 LLLEELTFLPAEPLSLSMPSDHRLRTLCQTLQAEPDTELSLDAAASRTGMSRRSFMRHFE 188 Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 +ETG+++ +WRQQ +L+ AL L G V VA GY S +AF FK+ LG++P Y Sbjct: 189 RETGMTYGRWRQQARLLAALPALAAGVPVVTVALDCGYQSASAFAATFKRSLGRSPASYF 248 >UniRef50_Q2SEK4 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SEK4_HAHCH Length = 255 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 78/231 (33%), Positives = 112/231 (48%), Gaps = 3/231 (1%) Query: 27 GTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL 86 GT+E H H GQL L G + W++P WIP GV H Q Sbjct: 26 GTEEREG--HSHEHGQLFCVLQGLTVVDTDAGRWLMPSNRLGWIPPGVRHGAQYFGAIAG 83 Query: 87 CFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 L++ P +P C + + L +I +A T + + RRL+ VL DE+ Sbjct: 84 WSLYLHPDICEPLPDEPCVYEANALMTPVIARIAEWTAGEPLDAPRRRLLHVLMDEIQAA 143 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 Q LHLP+ ++ + + P +L A +SER L R +ETGLS Q Sbjct: 144 QQPALHLPMPRDQRLLRLSHKLLATPENNDSLLALASDIGLSERTLTRKFREETGLSLGQ 203 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 WRQ +L AL+ L +G +V + A LGYDS +AFI +F++ G+TPGRY+ Sbjct: 204 WRQLARLARALELLAQGVSVTQTALDLGYDSVSAFIALFRRYFGETPGRYL 254 >UniRef50_B0T088 Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. K31 RepID=B0T088_CAUSK Length = 249 Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 80/223 (35%), Positives = 109/223 (48%), Gaps = 1/223 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS- 94 H H GQL+ A G + + A W+VPP A+WIP G+ H A + L+I P Sbjct: 26 HAHVWGQLVFASAGVMRVATDAATWLVPPTKAIWIPAGLTHQILFGGEAAMRTLYIAPGR 85 Query: 95 AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 A T+PT L+++PL RELIL + P RL +L D + Q Q L LP+ Sbjct: 86 AATLPTEPQALEVAPLLRELILHILKIGMLTPQRPEHDRLAGLLIDLMRQARSQDLCLPL 145 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 + + + P E L AG F S R L R+ +ETGL+ WRQ+ +LI Sbjct: 146 PRDRRALALAIHLQARPDEERGLAALAGPFGASLRTLQRVFPRETGLTLETWRQKARLIH 205 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 ++ L G +V A GY S AFI F + TPGRY+A Sbjct: 206 SVACLTTGASVTDAALASGYRSVGAFIGAFTRQFEVTPGRYLA 248 >UniRef50_C8Q2C9 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8Q2C9_9ENTR Length = 261 Score = 130 bits (327), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 80/235 (34%), Positives = 123/235 (52%), Gaps = 6/235 (2%) Query: 25 HAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANA 84 HAG +E H H QL+L L G + A W + P A+W+PG V H+ ++ Sbjct: 26 HAGREERW---HAHEVAQLVLCLQGVMRVQTHTASWTLTPGRALWLPGTVPHALTALSDI 82 Query: 85 ELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ-VLFDEL 142 L++EP A ++ ISPL + L+ TL +P+ LI +L DEL Sbjct: 83 RSLSLYLEPVVARAFWPEARSMMISPLLQALMQTLVEIGLQPHPDPLRAELITPLLLDEL 142 Query: 143 PQQPQQQL-HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGL 201 + P+ + LP+ + ++ + + + + P L +W S R LARL +TG+ Sbjct: 143 RRAPEGPVCVLPLPADRRLMNICQQLLQSPASSDTLEEWGSRVGASSRTLARLFRDQTGI 202 Query: 202 SFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 +F QWRQQL+L AL L +G V ++A LGY S +AFI+MF++ LG TP R++ Sbjct: 203 TFTQWRQQLRLSEALVQLAQGQPVLRIASQLGYQSPSAFISMFRRLLGDTPQRFL 257 >UniRef50_B5WKD5 Transcriptional regulator, AraC family n=1 Tax=Burkholderia sp. H160 RepID=B5WKD5_9BURK Length = 277 Score = 129 bits (325), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 109/225 (48%), Gaps = 3/225 (1%) Query: 34 PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE- 92 P H H +GQ A G +T W+VPPQ AVW+P V H Q++ + F+ Sbjct: 51 PDHTHTRGQFAYAAEGVMTVLTTAGNWVVPPQCAVWLPADVPHEMQMSGQVRMLNAFVHV 110 Query: 93 --PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150 A +P CC + S L R+LI + R++ +L DE+ L Sbjct: 111 RAKQASQLPRHCCVVSTSSLLRDLISEAVQQPALYNPTTRAGRIMALLVDEIAAMQPLAL 170 Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210 + P+ + P++ + + P L + A +S R+ RL ++ G+SF WR+Q Sbjct: 171 NAPLPNDPRLAALCREVLDAPSATLGLDEAASRIGLSRRSFTRLFREQLGVSFVAWREQA 230 Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 L+ A+ +G+++ +VA+ LGY S TAF TMFK+ +G P Y Sbjct: 231 CLLSAIARFARGESITRVAYDLGYSSPTAFSTMFKRVVGVAPYHY 275 >UniRef50_A6W2J3 Transcriptional regulator, AraC family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W2J3_MARMS Length = 267 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 124/225 (55%), Gaps = 2/225 (0%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 +H+H GQL+ +L G ++ E+ W+VP + VWIP H + ++++P Sbjct: 37 LHRHAFGQLVGSLEGLLSVQTESGWWVVPATHTVWIPPNTLHGAKSHGPFRGWSVYLDPK 96 Query: 95 -AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153 + + ++ T + +PL +EL+ A+ + ++ + RL +VLFDE+ P+ L Sbjct: 97 RSQLLDSSPKTFQTTPLLKELVHRAAS-WSDDTSQAVKSRLSEVLFDEIVNLPETLFGLL 155 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 P ++ M + + + +L +WA +S R LAR ++TGL F +WRQ+ +++ Sbjct: 156 QPGLPSLKKMTDGLLSNLADNRSLEEWARSIGLSSRTLARRFNEQTGLGFSEWRQRARVL 215 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 A++ L V +A TLGY++ +AFI MF++ +G TPG+YI R Sbjct: 216 SAIEMLADNVPVTNIAFTLGYENVSAFIAMFRRVMGVTPGQYIQR 260 >UniRef50_D2B3A1 AraC family transcriptional regulator n=5 Tax=Actinomycetales RepID=D2B3A1_STRRD Length = 265 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 72/222 (32%), Positives = 116/222 (52%), Gaps = 4/222 (1%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H QL G ++ V++A W++PP A+W+P GV H T +A LC L++ P Sbjct: 39 HSHTHHQLAWTRSGVLSVAVDDAYWVLPPTRALWLPAGVVHRTGATRDALLCSLYLNPVR 98 Query: 96 VTMPTTCCT-LKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 T+ T T + ++ L LI LA A ++ L LP P + +P Sbjct: 99 CTLNWTEPTAVGVNGLLAHLIAYLAREDLADDARLRAEAVVLDLLHPLPALP---IDVPR 155 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 ++R + + + P + +L A +S R L RL V++TGLSF +WR ++L Sbjct: 156 PVDERVRAVADTLLADPSDSRSLEAHARSIGVSRRTLTRLFVRDTGLSFDRWRTHMRLRA 215 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 AL L +G V +V+HT+GY + +AF+ F++ +G +PGRY+ Sbjct: 216 ALPLLAEGRPVSQVSHTVGYATPSAFLAAFRRTVGTSPGRYL 257 >UniRef50_Q0BZS2 Transcriptional regulator, AraC family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZS2_HYPNA Length = 260 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 67/220 (30%), Positives = 109/220 (49%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H + QL+ A G ++ + +++PPQ AVWIP V+H L L+I+P Sbjct: 39 HSHERIQLLYACSGVMSVVTDKTSFVIPPQRAVWIPSQVQHEVSCRGPVSLRTLYIDPRY 98 Query: 96 VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVS 155 C +++ L R LIL + + +++ +L EL P+ P+ Sbjct: 99 ERDDPDCHIVEVGQLLRALILEVTQFEHDYDLQGREGQIVSLLVSELLASPKVPYAAPMP 158 Query: 156 SHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMA 215 + P++ + + + P + + QWA MS R+ R +ETG+ WRQQ++L+ A Sbjct: 159 TDPRLVRVCREIIEHPSDQRDIDQWADIAGMSRRSFTRAFKRETGMGVALWRQQVRLLEA 218 Query: 216 LQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 L L G +V VA +GYDS +AF MF++ G +P RY Sbjct: 219 LSLLSTGSSVTSVAMDVGYDSASAFCAMFQRAFGVSPSRY 258 >UniRef50_A1K8N6 Putative AraC-family transcriptional regulator n=1 Tax=Azoarcus sp. BH72 RepID=A1K8N6_AZOSB Length = 261 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/228 (34%), Positives = 112/228 (49%), Gaps = 10/228 (4%) Query: 34 PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93 P H H GQL + GA+ V + W+VPP A+W+P GVEH + + L + + Sbjct: 34 PWHSHPWGQLAYPVSGAVCMDVPGSRWLVPPFRALWVPPGVEHQQSMLGHVRLRVVHVAE 93 Query: 94 SAVTMPTT-CCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV---LFDELPQQPQQQ 149 +P + C L+I+PL RELI L R P + R Q+ L EL Q Sbjct: 94 GCAALPESHCAVLEITPLLRELIEALLPRP------PQSERRTQIQALLLTELSQARTLN 147 Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209 L LP S ++ + E + P + L +WA S R LARL E G+SF WRQQ Sbjct: 148 LRLPQPSDRRLAALCEALMADPADNAPLTEWARRVGASGRTLARLFQSEMGMSFGLWRQQ 207 Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 ++L A + +G ++A LGY S +AF MF++ G +P + A Sbjct: 208 VRLTHATVLVAQGRPYAEIAAELGYASPSAFSAMFRRAFGCSPRAFYA 255 >UniRef50_B7GXZ6 Bacterial regulatory helix-turn-helix protein, AraC family protein n=12 Tax=Acinetobacter RepID=B7GXZ6_ACIB3 Length = 262 Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 119/229 (51%), Gaps = 6/229 (2%) Query: 33 SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92 +P H H + Q + A G I N +W+VPP A+WIP VEHS ++ +L +E Sbjct: 27 TPTHTHTRAQFLYASTGNIQVFTPNHVWIVPPMCALWIPANVEHSVISLSHVKLNTALVE 86 Query: 93 PSAVT-MPTTCCTLKISPLCRELILTL-----ANRTTTQRAEPMTRRLIQVLFDELPQQP 146 +A M C +++S L EL++ L T ++ ++R L ++F+E+ + Sbjct: 87 VNAAARMGQHCFIIRVSNLLHELLIRLNEIEREETPNTATSQELSRSLQILIFEEIQRAN 146 Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206 + +P ++ + + + P L WA S R L R+ KETGLS+R W Sbjct: 147 LLPIQIPWPKDKRLLKICQELLHTPNHSRDLTDWADDIGASSRTLMRMFQKETGLSYRAW 206 Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 QQ+ + +AL + G ++ +++ +LGY + +AF MFK+ LG+TP ++ Sbjct: 207 VQQMHIALALSKIANGKSIAQISESLGYTNPSAFSAMFKRHLGKTPQQF 255 >UniRef50_A1VPE7 Transcriptional regulator, AraC family n=2 Tax=Comamonadaceae RepID=A1VPE7_POLNA Length = 280 Score = 126 bits (317), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 91/254 (35%), Positives = 127/254 (50%), Gaps = 20/254 (7%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 EP H A +A+C G ++T+ Q R Q A ITC ++PP AVWI Sbjct: 40 EPHTHAWAQLAYCA-TGVVQVTA--EQTRPDQ---AQADEITC-------IIPPSRAVWI 86 Query: 71 PGGVEHSNQVTANAELCFLFIEPSAVTMP--TTCCTLKISPLCRELILTLANRTTTQRAE 128 G H V AEL L+++ SA T P C L +SPL REL+ +L + + E Sbjct: 87 APGARHHITVREAAELRTLYLDASA-TPPGWQGCRVLVVSPLLRELVHSLDDGSGQPLTE 145 Query: 129 PMTRRLIQVLFDELPQQPQQQLHLPV----SSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184 T+ L ++ DE+ Q L +P+ S ++R + E + + P E L WA Sbjct: 146 ARTQWLSALVLDEITHADIQALGVPMPHPDSGDKRLRALCEAVLRAPSERATLAGWAADI 205 Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244 SER +ARL + GLS++QWRQQ L AL L +G V VA GY S +AF MF Sbjct: 206 GASERTVARLFRDQLGLSYQQWRQQAILAHALPMLARGQPVGAVAAASGYASESAFSAMF 265 Query: 245 KKGLGQTPGRYIAR 258 K +GQ P ++ A+ Sbjct: 266 KAAMGQPPSQFHAK 279 >UniRef50_Q28MP8 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28MP8_JANSC Length = 270 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 77/243 (31%), Positives = 116/243 (47%), Gaps = 2/243 (0%) Query: 20 VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79 V + TD L P H H K QLI A+ G + + + +PP A+ +P HS Sbjct: 27 VGYAKDYPTDHLALP-HTHPKAQLIYAVSGVMHVDTGTSSYTLPPTTALLMPANRAHSIY 85 Query: 80 VTANAELCFLFIEPSAVTMPTTCC-TLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL 138 + + LF++ ++ + C + +S L +ELIL + ++ + Sbjct: 86 MDGPVAMRALFLQQKQPSVDLSACKVVSVSALLKELILAACDEPVEWEQTGRAPHIVALA 145 Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198 E+ Q L LP+ + P+I + + + P + +L WA F SER LARL KE Sbjct: 146 LHEIAQAVNLPLGLPLPTDPRIARVTDALRMRPADSRSLQDWALFAGASERTLARLFRKE 205 Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 TG++F QWR Q +L AL L +G T+ A GYDS AF F++ GQTPG A+ Sbjct: 206 TGMTFNQWRGQARLTAALSALSQGRTLAHAAAVAGYDSQPAFGAAFRRAFGQTPGEARAQ 265 Query: 259 LTT 261 T Sbjct: 266 HAT 268 >UniRef50_A1BBK0 Transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria RepID=A1BBK0_PARDP Length = 262 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 79/223 (35%), Positives = 105/223 (47%), Gaps = 1/223 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 HQHR+ QLI A G I A W+VPP VWIP H ++ + + L+IEP A Sbjct: 32 HQHRRAQLISAATGVIVLATPEATWVVPPNRGVWIPPATRHHVRIVGDVGMQSLYIEPGA 91 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 V MP+ C L IS L R LI N L++++ E+ P L LP Sbjct: 92 VPGMPSHCQVLGISALMRSLIAEALNLPLEYDQHGRDGVLMELIRLEMGGLPALPLSLPF 151 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 S P++ A+ P W+ MS R+ R +ETG SF WRQQ L+ Sbjct: 152 PSDPQLSRRCRAFAEKPAIHETTDDWSRALGMSRRSFTRFFRRETGASFMAWRQQACLLY 211 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 A+ L G+ V VA LGY++ AF MFK+ G P Y+ Sbjct: 212 AMPRLAAGEAVTTVAMDLGYENPAAFTIMFKRTFGSPPLAYLG 254 >UniRef50_C5CUS1 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CUS1_VARPS Length = 280 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/230 (32%), Positives = 118/230 (51%), Gaps = 13/230 (5%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 +HQH QL + G I + ++ ++VPP AVW+P + HS + +AEL +++ Sbjct: 45 LHQHPWPQLTFSTRGVIRLSTQDGSYIVPPSRAVWVPANMPHSIMLIEDAELRTVYLHAW 104 Query: 95 AVTMPTTCCTLKISPLCRELILTL---------ANRTTTQRAEPMTRRLIQVLFDELPQQ 145 C L+ISPL R L+L L A+ QR R + +L DEL + Sbjct: 105 LGPPWEKCEVLEISPLLRALMLALDTTPDGLPPADPHAPQR----ERMIAPLLVDELERA 160 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 Q ++ +P+ S ++R + E + + P + L + A SER +ARL + G+S++Q Sbjct: 161 TQIRIDVPLPSDKRLRQLCETLLRNPADRATLAERAAAIGASERTVARLFRDQLGMSWQQ 220 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 WRQQ + AL L +G V +VA GY + +AF MFK G++P + Sbjct: 221 WRQQAVMAHALPLLARGMAVSQVAAASGYATDSAFCAMFKAATGRSPTSF 270 >UniRef50_A8GH45 Transcriptional regulator, AraC family n=18 Tax=Enterobacteriaceae RepID=A8GH45_SERP5 Length = 257 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 114/222 (51%), Gaps = 3/222 (1%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS--NQVTANAELCFLFIEP 93 H+H GQL+ G + + ++ PP++ +W P +EHS NQ A + + + P Sbjct: 34 HRHSWGQLMWVKAGVMVLRIGGQRFLAPPEFVLWAPAEIEHSCYNQRLAQCRMVDIAL-P 92 Query: 94 SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153 MP C + ++P+ R + R RL + L D+L P QQ +LP Sbjct: 93 LCAGMPVDPCLVSVTPIFRAIAEDFYARKQYIPQSKQDLRLCRALIDQLHLSPVQQTYLP 152 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 S + ++E + P + +L WA +ER L+R ++ G+SF +WRQ+L+ + Sbjct: 153 SSEDKFLAPVLEALEHCPSDNTSLAAWAARVYTTERTLSRRCQQDLGMSFSEWRQRLRFL 212 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 A+ L +G TVQ+VA +GY S +AFI MF++ G TP R+ Sbjct: 213 HAVSLLEQGKTVQEVALEVGYSSASAFIVMFQQIAGTTPERF 254 >UniRef50_Q8EHW8 Transcriptional regulator, AraC/XylS family n=3 Tax=Gammaproteobacteria RepID=Q8EHW8_SHEON Length = 259 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 73/239 (30%), Positives = 118/239 (49%), Gaps = 1/239 (0%) Query: 18 AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77 A + F A +P H+H GQL L G + ++ P QYA+W+P GVEH Sbjct: 16 ADIFFNYEAFLPNTITPKHRHNWGQLQLISGGIMELHASGQRFLSPSQYAIWVPAGVEHE 75 Query: 78 NQVTANAELCFL-FIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136 + + C L + A P C L ++P+ + ++ L R +RL++ Sbjct: 76 SYTRRSIHYCSLNIVANRAQVFPDVTCLLAVTPIAQAIVNDLRQRQVRVAQTDADKRLVE 135 Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196 VL D+L Q LP S+ ++ +++ + P +L WA +ER LAR Sbjct: 136 VLIDQLILGQAQPQFLPSSTDKLLQPILQQLELEPASQKSLKSWASELHTTERTLARRCQ 195 Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 G+SF + RQ+ + I +LQ L +G ++++VA TLGY+ T+ +I MFKK +P +Y Sbjct: 196 NCLGMSFTELRQRHKFIYSLQLLREGLSIKEVALTLGYNQTSPYIVMFKKYAQYSPEQY 254 >UniRef50_B4SQ42 Transcriptional regulator, AraC family n=5 Tax=Xanthomonadaceae RepID=B4SQ42_STRM5 Length = 293 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 74/226 (32%), Positives = 116/226 (51%), Gaps = 5/226 (2%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL---CFLFIE 92 H H++ QLI G +T + W + P A W+P H+ VT + L Sbjct: 48 HHHQRAQLICVERGLLTTRTSHGTWSLAPGSAGWMPPLEPHT--VTLDGPLRGWGMALAA 105 Query: 93 PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152 P+ +P+ C L +S L + L + P + +I VL DE+ P+Q++HL Sbjct: 106 PACAALPSDPCVLGLSKLAQALADRICEWPLGYATTPERQHIIDVLLDEIRTAPRQRMHL 165 Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212 P+ ++ + + P + +L +WA + +S R+L R ET LSF QWRQQ +L Sbjct: 166 PMPHDRRLLKIASQLLADPSDERSLAEWAHWAGLSPRSLTRHFRDETTLSFAQWRQQARL 225 Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 AL+ L G +V +AH LG+ S +AF+T+F++ G PGRY+AR Sbjct: 226 SEALRQLTDGRSVADIAHALGFSSASAFVTVFRRHFGLPPGRYLAR 271 >UniRef50_B7GW45 Bacterial regulatory helix-turn-helix protein, AraC family protein n=13 Tax=Acinetobacter RepID=B7GW45_ACIB3 Length = 264 Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 74/236 (31%), Positives = 118/236 (50%), Gaps = 4/236 (1%) Query: 22 FCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT 81 F + E P H H G+ I A G + ++ ++ PP Y +W+P +HS Sbjct: 26 FRVRNAPAETVYPQHAHAWGEFIYAFSGVLEVNIDQINYLTPPPYGIWLPPYTKHSGINR 85 Query: 82 ANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTL-ANRTTTQRAEPMTRRLIQVLF 139 L++ S +P L SPL L+ L N + E + RL+QVL Sbjct: 86 NEVTHATLYVHESLCQKLPQKAGILLTSPLVPALLDHLRQNPQDETQVEYI--RLLQVLL 143 Query: 140 DELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKET 199 D+L Q +LP + HP + ++ + + P + L + A M+ER LAR KE Sbjct: 144 DQLIQAELVGSYLPTTDHPALAKILNDLHQCPADNSTLQELAERINMTERTLARYSQKEL 203 Query: 200 GLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 G+S +WRQ+L+++ A+ L +G T++ +A LGY S +AFI MFK+ +G TP ++ Sbjct: 204 GMSLHEWRQRLKVMKAMTMLNQGKTIESIAFDLGYASASAFIYMFKRWMGFTPDQF 259 >UniRef50_A3RTS8 Transcriptional regulator, AraC family n=4 Tax=Ralstonia solanacearum RepID=A3RTS8_RALSO Length = 365 Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 9/229 (3%) Query: 34 PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93 P H H Q+ + G + + W+VPP A+WIP G+ H V A L L+I+P Sbjct: 134 PRHTHAWAQVAYSHTGVLRVQAGDTAWVVPPSRAIWIPPGIVHEVWVVEAAFLRTLYIDP 193 Query: 94 SAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152 S VT C +++SPL RELI + R A L ++ DEL + L L Sbjct: 194 SVVTDALAQCRVMEVSPLLRELIAAMDVRRPLAPAREQA--LATLILDELRRSAPLPLDL 251 Query: 153 PVSSHPKIRTMVE--MMAKG-PVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209 P+ + ++R + E M G P+ + AL + G S R LAR E G++F QWRQQ Sbjct: 252 PMPADKRLRALCERVMADPGTPLTFDALAREVG---ASTRTLARRFRDELGVNFSQWRQQ 308 Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 L A+ + +G + ++A LGY+S +AF MF++ GQ+P ++ R Sbjct: 309 AVLASAIPLMSQGLPLSRIAQELGYNSQSAFSAMFRRAFGQSPSAFLHR 357 >UniRef50_Q11FA3 Transcriptional regulator, AraC family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11FA3_MESSB Length = 258 Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 111/226 (49%), Gaps = 1/226 (0%) Query: 34 PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93 P+H H Q + A G + T+E A +++ P+ A+WIP GV H+ ++ E L++E Sbjct: 33 PMHTHPWNQFVYATTGTLMVTIEQARYVITPEQAIWIPTGVRHTTTALSDVEFRNLYVED 92 Query: 94 -SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152 + MP C L +S L R LIL LA L V+ ++ + + L Sbjct: 93 LPNLNMPADCSVLAVSTLLRSLILELAEVEQKSDHSEYRDHLDAVILVQMSRLRKLDFFL 152 Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212 P +R + E++ P E + +WA MS R L+R ETG+S R WR +L++ Sbjct: 153 PWPHSSHLREICEVLYAHPDEPRDITEWASRAGMSARTLSRHFNAETGMSLRVWRHRLRV 212 Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 A++ L V +A LG+ S +AF F+ +G +P +IAR Sbjct: 213 FRAVELLSAHWRVTDIALELGFSSASAFTYAFRTEMGCSPTEWIAR 258 >UniRef50_D2BBL9 Transcriptional regulator, AraC-family n=18 Tax=Actinomycetales RepID=D2BBL9_STRRD Length = 278 Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 76/238 (31%), Positives = 119/238 (50%), Gaps = 13/238 (5%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI---- 91 H H + Q++ A G ++ T + W+ P A+WIP G H ++ + +L + + Sbjct: 26 HWHDENQIVYAGRGVLSVTTDAGSWIAPAIRAIWIPAGTVHEHRAYGDTDLHLVGLPVKD 85 Query: 92 EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151 P + P + + PL RELI+T + AE RRL VL D L QQ +H Sbjct: 86 NPLRLDQP---AVISVGPLLRELIITYTEQPADLTAE--RRRLRAVLLDRLRHSAQQPVH 140 Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211 +P + P++ + ++ P + L + +S+R L RL E G+SF QWR QL+ Sbjct: 141 VPAARDPRLVAVCAILRDNPADNRTLARLGAVAGVSDRTLTRLCRAELGMSFPQWRTQLR 200 Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSAKP 269 L AL L + V VAH G+ S++AFI +F++ G TPG + A +SP + P Sbjct: 201 LHYALLLLAEDTPVTAVAHRCGWASSSAFIDVFRRAFGHTPGTHRA----LSPTATAP 254 >UniRef50_A0KTL0 Transcriptional regulator, AraC family n=25 Tax=Gammaproteobacteria RepID=A0KTL0_SHESA Length = 292 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 74/231 (32%), Positives = 123/231 (53%), Gaps = 12/231 (5%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 +H+H QLIL L G + AL++VP A+++P GV H + A + CF+ + + Sbjct: 57 LHKHCWHQLILPLQGLLQTEANGALFLVPHTTALFVPAGVIHES--VAITDTCFIGVYLN 114 Query: 95 AVTMPTTCCTLK---ISPLCRELILTLANR---TTTQRAEPMT----RRLIQVLFDELPQ 144 + T+K +S REL+LT+ + T+ EP+ +RL++VL+D++ Sbjct: 115 PMCGRDYGATIKPVAMSAFLRELVLTIRKQCVFNTSMNVEPIALPTIQRLLEVLYDQINS 174 Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204 Q L + +++ + E + + P +L +W SER L+RL V+E G SF Sbjct: 175 AEGQTFKLLIPQDRRLKLIFEHLTQTPALDLSLAKWGEMVGASERTLSRLFVREFGSSFG 234 Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 WRQ L+LI +L L ++Q VAH +GY + +++I FK+ G TP R+ Sbjct: 235 LWRQHLRLIYSLSLLATNLSIQNVAHQIGYQNDSSYIKAFKERFGMTPQRF 285 >UniRef50_UPI00019092C6 AraC family transcriptional regulator n=1 Tax=Rhizobium etli CIAT 894 RepID=UPI00019092C6 Length = 283 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 72/221 (32%), Positives = 104/221 (47%), Gaps = 1/221 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS- 94 H+HR+GQL+ A G I T W++PP +WIP GV HS + + L++E Sbjct: 5 HEHRRGQLMNATSGLIVLTTPEGKWVMPPHRGMWIPAGVRHSVRAGGLVRMQSLYVETDR 64 Query: 95 AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 A MP C L+I+ R LI + + + ++ L+ + E+ + P L LP Sbjct: 65 AEAMPVHCQVLEITTFMRSLIGEVVGLSLDTEVDGRSQALMDLTLYEMERLPSLPLSLPF 124 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 S + P W+ MS R R+ ++TGLSF WRQQ L+ Sbjct: 125 PSDERFAKKCREFVGQPNIHQTTDDWSRELGMSRRAFTRMFRQQTGLSFVGWRQQACLLS 184 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 AL L G +V VA LGY++ AF MFK+ G+ P Y Sbjct: 185 ALPQLSAGQSVTSVAMELGYENPAAFTIMFKRAFGKPPLAY 225 >UniRef50_B0VLM5 Putative transcriptional regulator (AraC family) n=1 Tax=Acinetobacter baumannii SDF RepID=B0VLM5_ACIBS Length = 275 Score = 123 bits (309), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 3/226 (1%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 +HQH +GQLI A G + + E LW++PP++ VWIP H + L L+I+ Sbjct: 40 LHQHERGQLIYATSGIMELSTEEELWLIPPRFGVWIPAYTPHQMTTKTDVHLNTLYIDTY 99 Query: 95 --AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152 + P C + +S L EL++ A+ + + + +L +EL L Sbjct: 100 RWSKPFPDKPCGVTVSGLLHELLIRAASFPIEYPLHSVEWKTMDLLVEELKWTKGISLMT 159 Query: 153 PVSSHPK-IRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211 P K ++ + ++ P + +L +W+ + R L+RL +E +F WRQQL+ Sbjct: 160 PEPYMDKRLQDLCNILIINPADNHSLEEWSSQVGATTRTLSRLFKQEMNTTFTLWRQQLR 219 Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 ++ A+ L+ G + ++ LGY S + F MFKK +G+TP YIA Sbjct: 220 IVHAIPSLMAGKPISDISQELGYSSQSTFTVMFKKIMGKTPTEYIA 265 >UniRef50_B1JGH9 Transcriptional regulator, AraC family n=26 Tax=Enterobacteriaceae RepID=B1JGH9_YERPY Length = 261 Score = 123 bits (309), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 112/221 (50%), Gaps = 1/221 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H GQLI G + ++ ++ PP++ VW+P G+EHS+ + I Sbjct: 33 HTHPFGQLICVKSGVLAMSIGGQRFLAPPEFIVWVPAGMEHSSYNRKPMHFRAIDIALDF 92 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 T +P + + +SP+ ++ R RRL VL D+L P Q+ +LP Sbjct: 93 CTELPASPGLMNVSPIFNAIVEDCFTRDLLMPETQQDRRLAHVLIDQLKVSPVQRTYLPT 152 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 S + ++ + + P + +L WA +ER L+R +E G++F +WRQ+L+ + Sbjct: 153 SQDKLLSPILAALERCPADSTSLALWAKRVYTTERTLSRRCQQELGMAFSEWRQRLRFLH 212 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 A+ L +G TV VA +GY S +AFI MF++ G TP R+ Sbjct: 213 AISLLEQGKTVNSVALDVGYSSASAFIAMFQQISGTTPERF 253 >UniRef50_Q1ZB18 Transcriptional Regulator, AraC family protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1ZB18_PHOPR Length = 259 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 78/234 (33%), Positives = 120/234 (51%), Gaps = 5/234 (2%) Query: 25 HAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANA 84 H+GT L H H GQ A+ G + ++ PPQYA+W+P GVEH + A Sbjct: 29 HSGTQTLW---HSHAWGQWSYAIKGVLVVHTHAGRFVAPPQYAIWVPEGVEHQVISSGAA 85 Query: 85 ELCFLFIEPSAVTMPT--TCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDEL 142 ++ L+I ++ C ++S L +ELIL + + RL VL D L Sbjct: 86 QMRSLYIRTGSLINLCWHNACVCEVSSLAKELILRFGCFDSEYKLNGKENRLANVLLDTL 145 Query: 143 PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202 PQ Q LP+ S ++ + + + E + Q +S R+++RL +ETGL+ Sbjct: 146 DDLPQAQTQLPMPSDKRLLAIFDYLQVHTGEQINIDQIGHKVGLSGRSVSRLFKQETGLT 205 Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 F+QWRQ+L+L+ AL L + V +VA GY+S +AF+ F K G+TPG+Y Sbjct: 206 FQQWRQRLRLLSALNLLEQAMPVTQVAMECGYESLSAFVAAFGKQFGETPGKYF 259 >UniRef50_C3JKZ1 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus erythropolis RepID=C3JKZ1_RHOER Length = 267 Score = 123 bits (308), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 76/233 (32%), Positives = 114/233 (48%), Gaps = 8/233 (3%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H+HR+ Q + A++GA+ E+ W V P AV IP GV H+ + + L+IEPSA Sbjct: 32 HEHRRAQFLFAVNGAMNVETEDGEWTVLPSNAVMIPAGVAHAVTMDGVSTRS-LYIEPSA 90 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAE---PMTRR---LIQVLFDELPQQPQQ 148 P C + +S L REL++ + E P R ++Q++ EL Sbjct: 91 APWFPVRCRVVAVSSLLRELLVAAVDMDVELNVEDDSPAHGRSAAVLQLILHELRDLAPL 150 Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208 + LP+ HP +R + P + +WA +SER L RL++ ETG+S W Q Sbjct: 151 PVELPLPRHPGLRALCAQYLAAPSIHDSPTRWADRLHVSERTLHRLLISETGMSASSWMQ 210 Query: 209 QLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTT 261 + ++ AL L G +V +A LGY + AF M + G P Y AR+TT Sbjct: 211 RACILHALPKLSAGASVTAIASELGYSTPAAFAAMCTRVSGAPPSSYRARVTT 263 >UniRef50_A5V470 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V470_SPHWW Length = 261 Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 71/221 (32%), Positives = 105/221 (47%), Gaps = 1/221 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H+HR+GQLI A G + + +W+ PP+ AVW PGGV H+ ++ + IEP A Sbjct: 32 HRHRRGQLIYAARGVVVVSTAQGVWVAPPERAVWTPGGVSHAVRMVGAVSTRSVLIEPDA 91 Query: 96 -VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 ++ +++SPL R L+ ++ +L EL + P L +P Sbjct: 92 HGSLGDANKVIQVSPLLRSLLAAACEIDPEYDVAGRDGMVMALLLAELARAPSVSLAVPF 151 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 +I + P + W+ M R RL ++TGLSF WRQQ L++ Sbjct: 152 PKKAEIARKCQAFLDAPSPHDTIDMWSAELGMGRRAFTRLFRQQTGLSFGAWRQQACLLI 211 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 AL L G+ V +A LGY+S AF TMFK+ G P Y Sbjct: 212 ALPRLAAGEAVTTIALDLGYESPAAFTTMFKRLAGVAPSHY 252 >UniRef50_A6WQB9 Helix-turn-helix-domain containing protein AraC type n=4 Tax=Shewanella baltica RepID=A6WQB9_SHEB8 Length = 305 Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 75/229 (32%), Positives = 118/229 (51%), Gaps = 9/229 (3%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H GQ+I A G ++ ++VPP+ AVW+P V+H +L L+++ + Sbjct: 55 HSHPWGQVIYASQGVLSVITPAGRYIVPPEQAVWVPPFVDHEVIALGQVQLSSLYLDETQ 114 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRA---EPMTR----RLIQVLFDELPQQPQ 147 + P C L + P+ +L+L AN A EP + RL+ V+ D + P+ Sbjct: 115 IGGFPPDCTCLSVKPVL-QLLLQEANALMKSEAGLIEPDDKDSVMRLLMVIRDFMVLAPK 173 Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207 L LP K+ + E + P E L W S R LARL ++TGLS+ QW Sbjct: 174 VALDLPYPKDKKLLRITEALLADPSEQRTLVDWQREVGASARTLARLFKQQTGLSYSQWL 233 Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 Q+L+L +A+Q L +G++V A +LGY S +AF MF++ +G P +Y+ Sbjct: 234 QRLRLQVAIQMLSRGESVLTTALSLGYASGSAFGYMFRQLMGVAPSQYL 282 >UniRef50_A8GAI3 Transcriptional regulator, AraC family n=2 Tax=Serratia RepID=A8GAI3_SERP5 Length = 257 Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 71/235 (30%), Positives = 110/235 (46%), Gaps = 12/235 (5%) Query: 33 SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92 +P HQH +GQL L HG I + W + W+P H N L++ Sbjct: 16 TPWHQHTRGQLYLLTHGMIALETQEQQWAMTAGSIGWLPANCAHQALACGNVAGWSLYLP 75 Query: 93 PSAVTMPTTCCTLKISP---LCRELILTLANRTTT---QRAEPMTRRLIQVLFDELPQQP 146 S C L P LIL L R QR RRL+QVL DE+ Q Sbjct: 76 GS------LCADLPKQPHLSTASGLILALVERLAQFAGQRLNAPQRRLLQVLLDEMCAQE 129 Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206 L LP+ ++ + + P + +WA + +S R L+R + ETG++F +W Sbjct: 130 STPLQLPLPQDARLLKIARALLNEPASERSQSEWAAWTGLSVRTLSRHFISETGVTFARW 189 Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTT 261 RQQ +++ +L+ L +G+ + ++A GYD+ +A+I F++ G TPG Y + T Sbjct: 190 RQQARVLRSLEPLSRGEAINQIAGDCGYDNVSAYIAAFRQRFGTTPGLYFVQRET 244 >UniRef50_Q0TI30 Transcriptional regulator, AraC family n=14 Tax=Enterobacteriaceae RepID=Q0TI30_ECOL5 Length = 271 Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 74/234 (31%), Positives = 116/234 (49%), Gaps = 5/234 (2%) Query: 32 TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL-CFLF 90 T P H+H QL+ G + ++W+V A+W+P + H T N L L Sbjct: 27 TVPWHKHLYAQLLYPAEGVVRIWAGESVWLVHASSALWLPPQMPHKFVATGNVLLKTVLV 86 Query: 91 IEPSAVTMPTTCCTLKISPLCRELILTLA----NRTTTQRAEPMTRRLIQVLFDELPQQP 146 E + T+ C ISPL REL++ + +++TT + + L ++ E+ Sbjct: 87 SEAESETLGKVCFMTGISPLLRELLIAINQLPPSQSTTDKQQLRFSALETLILQEIKMGV 146 Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206 + L LP + +++ + E + L A +S R L RL VKETGL+FR W Sbjct: 147 KMSLELPWPNDERLQQLCENLLNNQGYLPTLDNLADKINVSSRTLMRLFVKETGLTFRHW 206 Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260 QQ+ +I A+ L G ++ K+AH LGY S +F MFK+ G +PG++ RLT Sbjct: 207 VQQMHVISAVTLLDDGYSLTKIAHRLGYASAESFGNMFKRRTGYSPGKFTRRLT 260 >UniRef50_A9IA98 Transcriptional regulator, AraC family n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IA98_BORPD Length = 243 Score = 120 bits (300), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 76/227 (33%), Positives = 119/227 (52%), Gaps = 10/227 (4%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H +GQL+ A G + W + P+ A+WI GV+H + + +L IEP A Sbjct: 16 HSHEQGQLVHATSGVVRVLTSQGGWTLAPRQALWIAPGVDHELHMIGQVAMRWLRIEPDA 75 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH--L 152 + C ++++PL RELIL + E ++ +L +L Q+ + +H L Sbjct: 76 APWLWAECRQIRVTPLLRELILKMLQDPPVYPPESNAAMIVPLLLRQL-QEAEVIVHGKL 134 Query: 153 PVSSHPKIRTMVEMMAKGPVE---WGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209 P+ ++ + E++ + P LG+ AG S R L+RL ++TGL+F QWRQQ Sbjct: 135 PLPRDKRLLKVCEVLIRSPANNDPMALLGERAG---TSVRTLSRLFKEQTGLTFVQWRQQ 191 Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 L+L A+ L G +V VA +GY + AF TMF++ LG TP RY+ Sbjct: 192 LRLSEAVCQLSLGQSVSSVAQDMGYATANAFSTMFRRTLGATPQRYM 238 >UniRef50_A0KEB0 Transcriptional regulator, AraC/XylS family n=25 Tax=Proteobacteria RepID=A0KEB0_AERHH Length = 274 Score = 120 bits (300), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 75/247 (30%), Positives = 136/247 (55%), Gaps = 4/247 (1%) Query: 10 YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69 ++PD+H +A+ G + S HQH++ QL+ A G +T +++ + ++PP A W Sbjct: 10 FDPDQHDGSAIGIASALGWHD--SGRHQHKRHQLLFAQAGCMTIELDDQVCLLPPTRAAW 67 Query: 70 IPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129 +P G+ H + L+ +P +PT L ++PL RE+I +A + A Sbjct: 68 LPAGLPHRVLMRGVVAYRSLYFQPEP-GLPTEMAVLAVNPLLREIIERMAIWPWDKPAAE 126 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 L +L +EL Q P++ LP+ S P++ ++ + +G L + A S++ Sbjct: 127 QHCTLA-LLQEELAQAPRESWQLPLPSDPRLAGWLQEVKRGDTLPDRLNRLAERVGASDK 185 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 + R+ ++ETG+S++ WRQQ +L+ AL+ L + + + +VA TL + S +AFI+ F++ G Sbjct: 186 TIGRIFMRETGMSYQAWRQQWRLLRALELLAEAEPISRVAATLEFASDSAFISFFRQHTG 245 Query: 250 QTPGRYI 256 QTP RY+ Sbjct: 246 QTPLRYL 252 >UniRef50_A9HXG4 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria RepID=A9HXG4_BORPD Length = 284 Score = 119 bits (299), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 71/229 (31%), Positives = 110/229 (48%), Gaps = 2/229 (0%) Query: 29 DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88 E T P H H +GQL+ A+ G + + + W +P A+W+P G H Q+ + Sbjct: 53 SETTGP-HSHPRGQLVYAIEGVMRVSTPDGFWTLPSLRALWVPPGTVHGIQMVGKVSMRT 111 Query: 89 LFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147 L++ +A ++ C +++S L RELIL L E ++ +L EL P Sbjct: 112 LYVHANAANSLWDRCQVVEVSGLLRELILALTAEPIEYALEGRGGQIATLLLTELKAAPV 171 Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207 + +P +++T+ + P + W S R L RL E GL++RQW Sbjct: 172 IPIRIPWPQDRRLQTVCRAILAQPGLARTVDDWGDEVGASGRTLIRLFQAEVGLNYRQWV 231 Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 QQ++L AL L G V +VA LGY S +AF MF++ LG P Y+ Sbjct: 232 QQVRLAEALHRLSLGQPVARVAAELGYRSPSAFSAMFRRALGSPPQAYL 280 >UniRef50_C3JM12 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus erythropolis RepID=C3JM12_RHOER Length = 278 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 77/234 (32%), Positives = 115/234 (49%), Gaps = 9/234 (3%) Query: 28 TDELTS-PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL 86 TD +T P H H + +LI + G + +EN LW V P +WIP GV H Q AN + Sbjct: 47 TDHITRWPEHAHVEHELIWSDRGVVNMIIENQLWTVTPGVGLWIPRGVLHEGQ--ANPHV 104 Query: 87 CF---LFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELP 143 F LF C + +S R L++ LA+ T AE R QV D L Sbjct: 105 AFRATLFTPELWTPAWNEPCIVTLSEAARALLIHLAH--TGMPAE-QRLRAQQVCVDLLT 161 Query: 144 QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203 +P+ P++R +V+ + P + +L QWA +S R + R+ E LSF Sbjct: 162 PASAPHFDVPIPRDPRLRMLVDKVLSDPADDRSLDQWAHVLNLSRRTVTRIFAAELALSF 221 Query: 204 RQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 QWR +++ AL L G +V V+ +GY ++++FI F+K +G TPG +A Sbjct: 222 AQWRTLVRMSTALGMLGTGMSVNAVSRRVGYGTSSSFIAAFRKTVGYTPGNALA 275 >UniRef50_A8T3D4 AraC-type DNA-binding domain-containing protein n=5 Tax=Vibrionales RepID=A8T3D4_9VIBR Length = 266 Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 68/234 (29%), Positives = 118/234 (50%), Gaps = 2/234 (0%) Query: 24 IHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTAN 83 + A + S VH H K QLI + HG +T T+E+ +++PP A WIP G H+ Q T Sbjct: 22 VAAEISDHDSGVHFHAKDQLISSQHGCMTITLEDVKYVLPPMRAAWIPRGTSHNAQSTNV 81 Query: 84 AELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDEL 142 A+ L+ +PS A +P ++PL R LI ++ + E + + +EL Sbjct: 82 AQYRSLYFDPSLASRLPRKIRIFDVTPLMRILIDRMS-FWPFDKPESEQINTLNLFIEEL 140 Query: 143 PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202 L LP+ ++++ + + +L + + SE+ + R+ +ETG+ Sbjct: 141 NDSEDVYLQLPLPKDYRLQSWISKIDDEAFSAPSLAKLSQLVGASEKTITRIFNRETGMP 200 Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 ++ WRQQ +L+ A++ L G + +AH L + S +AFI F++ G TP Y+ Sbjct: 201 YQSWRQQWRLLGAIELLSSGMRLSDIAHRLEFSSDSAFIYFFRQKTGTTPMSYL 254 >UniRef50_C9PF84 Transcriptional regulator AraC family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PF84_VIBFU Length = 248 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 115/230 (50%), Gaps = 3/230 (1%) Query: 32 TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91 T H+H+ Q + AL+G I W+V +WIP GV HS ++T + ++ LF+ Sbjct: 18 TEAAHEHQCAQFLHALNGVIRVDTAAGTWVVTANKGMWIPAGVSHSLRITGHVKVRTLFV 77 Query: 92 EPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150 + A +P TC ++ L + LI+ + + A R+ +++ DEL + Sbjct: 78 DAMARADLPNTCVLSEVPSLLKHLIVEAVSLPEERIAGTREERIFELILDELRRLKPVDF 137 Query: 151 HLPVSSHPKIRTMVEMMAKGPVE-WGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209 +LP S + + + ++ W A A + SER ++R +E GL+F +W +Q Sbjct: 138 YLPNPSSDGLIMLCDYVSDRIAHPWTATDA-AKYLGQSERTVSRKFQQELGLTFTEWLRQ 196 Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 +L+ AL+ L G +V A +GYDS +AF MFK +G TP Y A + Sbjct: 197 KRLVHALELLASGHSVLDSALEIGYDSPSAFSAMFKSRIGLTPSEYTASI 246 >UniRef50_Q47Y50 Transcriptional regulator, araC family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y50_COLP3 Length = 268 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 65/223 (29%), Positives = 112/223 (50%), Gaps = 1/223 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H QL + G + + ++++PP+ A+W+P G+ H + L+ +P Sbjct: 45 HSHPWSQLSYSCVGVMHIETDAGIFVIPPEQALWLPPGMAHQHFCKNKVSYRSLYFDPVL 104 Query: 96 VTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 M L + PL + LIL ++N + T+R + VL D L +L +P Sbjct: 105 SEMLGDKVRPLTVDPLLKSLILEISNWSEDYEETEETQRFLLVLLDRLAIAKSNELFMPT 164 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 ++ ++E + + P + QWA S R L RL + G+ F +W+Q+L+++ Sbjct: 165 IQDKRLFPIIETLNQEPANKLTIEQWALKVGASSRTLNRLFNQNYGMGFSRWKQKLRILK 224 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 +L+ L + +A LGY+ST+AFIT FKK LG +P +Y+A Sbjct: 225 SLELLNSNARLVDIAFELGYESTSAFITAFKKQLGCSPKKYLA 267 >UniRef50_C4XL68 AraC family transcriptional regulator n=2 Tax=Desulfovibrio RepID=C4XL68_DESMR Length = 350 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 105/223 (47%), Gaps = 1/223 (0%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 H H GQL A G I T + + PP+ AVW+P G+ H T A + L+I Sbjct: 32 AHSHPFGQLSYAGEGVIEVTTPVSSHVAPPRRAVWVPPGLLHEVTTTRPAAMRSLYIRAD 91 Query: 95 -AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153 + P C L+++ L RELIL A + RL +VL D+L P+ L LP Sbjct: 92 QTIFCPPRCLVLRVTRLARELILAAAALPPAYDEDGSAGRLARVLLDQLAGLPEADLSLP 151 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 + P + + + P + + A MS R LAR +TGL F WR++ +L+ Sbjct: 152 WPADPALAALCRELRDAPDDGRDMDALARQAGMSGRTLARRFEAQTGLRFGAWRRRQRLL 211 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 AL L GD V A GY S +AF+ F+ G TPG ++ Sbjct: 212 AALGRLEAGDNVTTAALESGYASVSAFVAAFRDMFGATPGAFL 254 >UniRef50_Q7CRR0 Transcriptional regulator, AraC family n=4 Tax=Rhizobiaceae RepID=Q7CRR0_AGRT5 Length = 284 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 112/223 (50%), Gaps = 1/223 (0%) Query: 33 SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92 +P H H + Q+ A G + + + WM+PP + + IP G++H ++ +N E+ +++ Sbjct: 44 TPPHSHSRVQIWCARQGVVLVSTADGRWMIPPGHGLLIPAGLQHEAEIISNVEMHSIYVH 103 Query: 93 PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152 P + + ++I+ L LI L A + +L DE+ + P++ L L Sbjct: 104 PE-LFQAESPKVVEITDLASSLISELLAEEHQPSAFHRQGLVRALLLDEVNRLPERPLGL 162 Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212 P + ++ + + PV + +WA ++S R+ RL +E G+SF WRQQ + Sbjct: 163 PFPDNQRLAALCRDFLRKPVARVEIDEWAAAMSISRRSFTRLFRRELGVSFVTWRQQACI 222 Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 +L L G+ V VA GY++ AF TMF++ LG +P Y Sbjct: 223 FASLPRLAAGEAVTNVALDAGYENIPAFTTMFRRMLGSSPRAY 265 >UniRef50_B3Q9E6 Transcriptional regulator, AraC family n=2 Tax=Rhodopseudomonas palustris RepID=B3Q9E6_RHOPT Length = 286 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 76/231 (32%), Positives = 116/231 (50%), Gaps = 5/231 (2%) Query: 29 DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88 +E TS H HR+ Q IL + G E ++VPP + +WIP GV H ++ E Sbjct: 48 NESTSTRHLHRRDQFILQITGVTAMMTERGHFVVPPGHGLWIPAGVVHQSRAWGEVEAQT 107 Query: 89 LFIEPSAVTMPTTCCTLKISPLCRELILTLANRT---TTQRAEPMTRRLIQVLFDELPQQ 145 +++ P+ + C L + E ++ A R Q T LI++L E+ + Sbjct: 108 IYVTPNRERKASDTCRLIRASSLIEALMDEAVRIPEIYDQNGRDGT--LIELLLTEIARM 165 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 P+ LH+ + P++ + + + P L WA +S R L RL +ETG SF Sbjct: 166 PEVTLHVQMPPDPRLAEICKAVLGDPSSNLTLDHWADKCGLSRRTLTRLFRRETGQSFSG 225 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 WRQ+++L+ AL L G+TV VA +GYDS +AF MFK+ LG P Y+ Sbjct: 226 WRQRVRLLEALARLGAGETVTGVALDVGYDSPSAFAAMFKRELGSAPRHYL 276 >UniRef50_B1KGB7 Transcriptional regulator, AraC family n=2 Tax=Shewanella RepID=B1KGB7_SHEWM Length = 261 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 1/221 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H+H GQ + A G + + ++VPP+ VW+ H ++ EL + + + Sbjct: 37 HRHTWGQFVYASRGVLAVATTVSRYIVPPEQGVWVTPNTCHEVTAISDVELTSFYFDNTV 96 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 ++ P CC L + + LI+ + + RL++++ D+L + L LP Sbjct: 97 LSGFPECCCVLNVEFFLKVLIVESKSIDGDYEWSGVDGRLLRLIRDKLIVAIKIPLQLPY 156 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 ++ ++ + P L QW S R L+RL ETGL++ +WRQ+ + + Sbjct: 157 PKDSRLLAILTQLQLEPSNRNNLVQWGNIVGASARTLSRLFKNETGLTYSEWRQRFNVQV 216 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 A+ L G+TV ++ LGY+S ++FI MF+K G TPG Y Sbjct: 217 AITKLSSGETVSNISLNLGYESPSSFIYMFRKLTGVTPGFY 257 >UniRef50_C9PF82 Substrate-binding transcriptional regulator AraC family protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PF82_VIBFU Length = 274 Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 71/241 (29%), Positives = 116/241 (48%), Gaps = 2/241 (0%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 H+A + IH + H H Q+I L G + ++EN +VP ++IP Sbjct: 12 HQAFITKTIHMRAGYIDD-FHTHPWHQIIFPLSGLLQSSIENRSVIVPHNAMLYIPADTV 70 Query: 76 HSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134 H + + + +++ P S V + ++P + LIL L NR+T + L Sbjct: 71 HKSVSVTDTQFLAMYLNPKSGVNYGVEAKSCLVTPFLKALILLLFNRSTQAQPPENLIHL 130 Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 + VL D++ Q + L + +++ + E + P +L +WA SER L+RL Sbjct: 131 LTVLRDQIDTAGQYAIPLLIPRDKRLKAIFEQLTAQPDVKFSLNEWAKHVGASERTLSRL 190 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 KE SF WRQ ++L+++LQ L T+Q +A LGY S +A+I FKK TP + Sbjct: 191 CAKEFDQSFSLWRQNVRLVLSLQLLSTPRTIQDIALELGYASDSAYIYAFKKLFHHTPSK 250 Query: 255 Y 255 Y Sbjct: 251 Y 251 >UniRef50_C1A6S8 AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6S8_GEMAT Length = 286 Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/236 (30%), Positives = 115/236 (48%), Gaps = 6/236 (2%) Query: 41 GQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI-EPSAVTMP 99 GQLI A GAI+ V +LW+VP + +W+P H ++ L +FI A +P Sbjct: 40 GQLIWASRGAISVMVGQSLWLVPARSGLWLPPATTHDVRMIGRGVLRLVFIARARARALP 99 Query: 100 TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPK 159 T ++PL RE++ + R T A+P RL+ VL DEL + LP+ + P+ Sbjct: 100 KTPAVRALTPLLREILRRVLARDTLTTADPRDGRLLGVLVDELSEVSPAPFDLPMPTDPR 159 Query: 160 IRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGL 219 ++ + P + A S R L R+ ETGL+F WR + +L+ A+ L Sbjct: 160 AIRAAALVREHPAQPPDAITIARHAGASVRTLERVFRAETGLAFGAWRLRARLMHAMILL 219 Query: 220 VKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI-----ARLTTVSPQSAKPD 270 G++V + G+ T+AF+ F++ G TPG Y +R + VS Q+ P Sbjct: 220 ANGESVTRTGIAAGFAGTSAFVHAFRRTTGTTPGAYATPGVRSRTSPVSSQTGVPS 275 >UniRef50_B9JII8 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JII8_AGRRK Length = 276 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 80/257 (31%), Positives = 120/257 (46%), Gaps = 11/257 (4%) Query: 8 NGYEPDRH-HEAAVA-FCIHAGTDE--LTSPVHQHRKGQLILALHGAITCTVENALWMVP 63 NG+E + H EA+ A +H+ + T P H HR+ QL+ G I WMVP Sbjct: 14 NGHEQNMHWTEASNADVLVHSSEPQQGYTVPWHHHRRSQLLCVFAGVILILTTRGRWMVP 73 Query: 64 PQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCC-TLKISPLCRELILT---LA 119 P +A++IP G+EHS ++ ++ + +++ P ++++ L R L+L L Sbjct: 74 PGHALFIPAGLEHSVEMLSDVSMKSVYVMPHDPRQSDEAPRVVEVTDLARSLLLEAIRLR 133 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 R + L+ L ++P L LP S ++ + P L Sbjct: 134 EAPVGNRKAELVLSLLLEEISTLEERP---LGLPFPSDRRLAALCRAYLANPTPNARLDD 190 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 WA AMS R R KETG+SF WRQQ + L L +G V VA GY+S A Sbjct: 191 WAEKLAMSRRTFTRQFRKETGISFTTWRQQASVFACLPQLAEGQPVTNVALEAGYESAAA 250 Query: 240 FITMFKKGLGQTPGRYI 256 F TMF++ LG +P Y+ Sbjct: 251 FTTMFRRMLGTSPRTYM 267 >UniRef50_A6V354 Transcriptional regulator, AraC family n=3 Tax=Pseudomonas RepID=A6V354_PSEA7 Length = 244 Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 73/238 (30%), Positives = 117/238 (49%), Gaps = 7/238 (2%) Query: 23 CIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTA 82 C H +E+ H H + QLI A+ G + W+VP +A+W+P EH +++ Sbjct: 8 CDHHDGEEILP--HCHAQAQLIHAISGVMLVGAARRNWVVPAGHALWVPPNTEHQIRMSG 65 Query: 83 NAELCFLFIEPSAVTMPTT---CCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLF 139 + + LF+ A T P C + +SPL REL++ + + R + ++L Sbjct: 66 SVRMRTLFM--PAATWPRDGEQCQVIAVSPLLRELLVAASEMHLGDSSAQRRRCIHELLL 123 Query: 140 DELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKET 199 EL +HL + P++ + + P E + WA MS R LARL +E Sbjct: 124 VELDAAQTIGIHLVMPRDPRLLRLCSQVIGTPAEETRMEDWARQLNMSSRTLARLFQREL 183 Query: 200 GLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 G+SF WR + +++++LQ L G +V +VA GY S +AF FK+ LG +P Y A Sbjct: 184 GMSFGDWRTRARMVLSLQRLSAGASVLEVALEHGYQSPSAFSQTFKRTLGHSPSHYQA 241 >UniRef50_A9ILC9 Transcriptional regulator, AraC family n=3 Tax=Bordetella RepID=A9ILC9_BORPD Length = 308 Score = 116 bits (291), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 1/229 (0%) Query: 31 LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLF 90 + P H+H KG L+ G + + + P W+P G+ H +A FL+ Sbjct: 79 IAVPAHRHDKGMLLAVREGVSVVRSDGEVLTMTPGRLGWMPPGMLHEAHWFGDARGLFLY 138 Query: 91 IEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ 149 + A ++P C PL L+ LA ++ T RL +VL EL PQ Sbjct: 139 VRADACDSLPAQACAWASGPLVEALLQRLAGIPPDEQNLAHTLRLFEVLVAELRILPQAS 198 Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209 L LP+ ++ + + P + + WA MS R L R ETG++ +WRQQ Sbjct: 199 LPLPMPRDHRLHELATTLLDRPDDARGIEAWARRVNMSSRTLMRRFRAETGITLGRWRQQ 258 Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 +L+ +L+ L G V + A +GY+S +AFI+ F+ G TP +Y AR Sbjct: 259 ARLLRSLEWLAAGKPVTEAALAVGYESISAFISSFRNAYGVTPSQYFAR 307 >UniRef50_Q5E435 Transcriptional regulator, AraC family n=3 Tax=Vibrionaceae RepID=Q5E435_VIBF1 Length = 271 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 69/235 (29%), Positives = 114/235 (48%), Gaps = 4/235 (1%) Query: 22 FCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT 81 F + A T+ L+ H H GQL L G + V+ P YA+W P + H Sbjct: 33 FFLEAKTETLS---HSHPWGQLHLIKQGRLEMEVDKQKMFCPANYAIWTPAHLLHRAFNH 89 Query: 82 ANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFD 140 + E C + IE + +PT+ C ++PL R ++ L R TT+ + L VL + Sbjct: 90 NDVEYCAINIEFELSQKLPTSACMFPLTPLLRAIVDDLVERQTTEVLSTEDKYLSHVLIE 149 Query: 141 ELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETG 200 L + + +LP + + ++ + + P + +L WA +ER LAR KE Sbjct: 150 RLSKTNPIENYLPFTDDKLLAPILMQLQENPADDSSLEIWAKRVFSTERTLARRFQKELK 209 Query: 201 LSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 +SF WRQ+ +L A+ L ++ ++A+ LGY ++FI MF+K G TP ++ Sbjct: 210 MSFNDWRQRAKLAKAMVLLKDAISINEIAYQLGYSQGSSFIKMFRKHTGVTPEQF 264 >UniRef50_C6RQZ7 Transcriptional regulator, AraC family n=1 Tax=Acinetobacter radioresistens SK82 RepID=C6RQZ7_ACIRA Length = 254 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/236 (30%), Positives = 113/236 (47%), Gaps = 9/236 (3%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 TD H+H + QL+ L G I +W++PP +WIP HS ++ N E Sbjct: 20 TDGYVEGTHRHDRIQLLHTLSGVIHVRTSEGIWVIPPSKGIWIPENKRHSIKIFGNVEAR 79 Query: 88 FLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAE--PMTR--RLIQVLFDEL 142 +F++P A T C + I L ELI N+ + E P TR RL++++ DEL Sbjct: 80 GIFVDPFARADFNTQCSVVAIPKLLSELI----NQAVQIKEEILPHTRNERLLELILDEL 135 Query: 143 PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202 + LP + ++ + E + L A A++ + L+RL KE ++ Sbjct: 136 RFLEEIPFRLPEAKSEILKEICENIKADLSATNHLEMVAKQHALNSKTLSRLFQKELNMN 195 Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 F W +Q +L+ AL L + +A LGY+S +AF MFK+ +G TP YI R Sbjct: 196 FSVWLKQAKLLQALTDLEMRKPILNIALDLGYESPSAFSYMFKRQMGMTPTEYIKR 251 >UniRef50_C9NXQ1 Transcriptional regulator AraC family n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NXQ1_9VIBR Length = 243 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 2/222 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 HQH QL G T + W + P WIP ++H + V A+ E +++ + Sbjct: 20 HQHEYAQLYWLNKGIFTIETSDQQWTITPACLGWIPPHLQHRSDVVADIEAVMIYVPLTW 79 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 + P ++ + L + LI + + + P R+ QVL DE+ P L+LP+ Sbjct: 80 LNAFPQQAKVIQSNTLIQALIERITHFDLSAMTAPQQRQF-QVLLDEIHLAPASNLYLPL 138 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 K+R + + + P + + + A F S R L+RL KETG++F WRQQ +L+ Sbjct: 139 PKEAKMRQIADTLLATPDDARSQTELAHDFGTSTRTLSRLFKKETGMAFGFWRQQARLVS 198 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 +L L KG ++ VA + GY +T++FIT FK G TP Y Sbjct: 199 SLPMLEKGLSITYVALSCGYSNTSSFITAFKARFGVTPSVYF 240 >UniRef50_D1P6X5 Transcriptional regulator, AraC family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P6X5_9ENTR Length = 276 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 2/229 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS- 94 H+HR+ Q + G I + + W++PP VWIP H ++ N L+IEP+ Sbjct: 43 HEHRRAQFLYGATGLIEVSTADGEWVIPPDCGVWIPAQTLHETRML-NVSTRSLYIEPTV 101 Query: 95 AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 A C L++S L R+L+L + LIQ++ E+ + P+ Sbjct: 102 APRQSRKCEVLRVSRLLRQLLLEAVDIPLEYDLHGREGILIQLILHEVARAKPLPFFAPI 161 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 + T+ P +WA SER+ +R +TGLSF WRQQ L+ Sbjct: 162 PRDTHLATLCREFLTAPHITSLPQEWAKKLHKSERSFSRFFSAQTGLSFSNWRQQACLLN 221 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVS 263 A+ + G ++ +VA LGY + +F TMFKK LGQ P +I ++ S Sbjct: 222 AITNISAGKSITEVAFDLGYCNVGSFSTMFKKWLGQPPSSFIQQIDESS 270 >UniRef50_B7H290 Bacterial regulatory helix-turn-helix protein, AraC family protein n=15 Tax=Acinetobacter RepID=B7H290_ACIB3 Length = 254 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 110/214 (51%), Gaps = 2/214 (0%) Query: 41 GQLILALHGAITCTVENALWMVPPQYAVWIP-GGVEHSNQVTANAELCFLFIEPSAVT-M 98 G +L+G + VE +++ PP Y +WIP V S + + + P + + Sbjct: 35 GDFNFSLNGILEIQVEEQIYLSPPSYGLWIPPQTVHQSTHIDHEIHYICIRLHPRLCSIL 94 Query: 99 PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHP 158 C I P R L+L + + L+QVLFD+L Q P +LP + HP Sbjct: 95 GDICRCFSIQPFFRTLVLQILEQQKQTEKPEYLEHLLQVLFDQLQQAPAYSHYLPQTRHP 154 Query: 159 KIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQG 218 + ++E ++ + +L Q F++S+R+L RL +E LS +WR + +++ A+ Sbjct: 155 VLLPILEKLSDPLLFNLSLQQLLQNFSVSDRHLLRLSQQELQLSLSEWRNRAKIVYAIHQ 214 Query: 219 LVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252 + +G +++++A+ LGY +++FI FK+ GQTP Sbjct: 215 IRQGTSIKRLAYDLGYQHSSSFIEFFKRYTGQTP 248 >UniRef50_B5XX95 Transcriptional regulator, AraC family n=7 Tax=Enterobacteriaceae RepID=B5XX95_KLEP3 Length = 266 Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 66/230 (28%), Positives = 115/230 (50%), Gaps = 9/230 (3%) Query: 33 SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92 P H H +GQL+ A G + E+ W++PPQ A+W+P HS + + +L ++ Sbjct: 39 DPPHHHVEGQLLFATRGVMLVQTESDRWVIPPQRALWLPPLHIHSYHLLSQTDLRAVYFS 98 Query: 93 PSAVTMPTTCC------TLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146 S + T+ + +PL +ELI A + A P R++ +L + L + P Sbjct: 99 SSLIAECTSFTKSQQVHVITATPLVKELI---AGLFSEDYARPSQRKIALLLLEILSEAP 155 Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206 + LP+ + ++ + + +L + A AMSER +RL +K+TG SFR W Sbjct: 156 PLTMALPMPNDERLFSAARSLLVNQRWEASLSELAFMSAMSERTFSRLFMKDTGFSFRTW 215 Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 +Q+ ++ +L L G +++VA+ LG+ AF F+ LG TP ++ Sbjct: 216 KQRARICASLDLLTNGVPIKQVAYQLGFSCPAAFTAAFRCILGATPRDFV 265 >UniRef50_B2UKA3 Transcriptional regulator, AraC family n=8 Tax=Betaproteobacteria RepID=B2UKA3_RALPJ Length = 265 Score = 113 bits (282), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 66/221 (29%), Positives = 109/221 (49%), Gaps = 1/221 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI-EPS 94 H H GQL G + VE P +Y +W+P HS + + +++ EP Sbjct: 34 HTHPWGQLNRIALGLMEVVVETRRLTAPAEYLIWVPANQPHSASIRQATDFLSVYVAEPL 93 Query: 95 AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 A +P C ++ +PL R L+ R + A+ R ++L + L + +LP Sbjct: 94 ARRLPPMACLIQQTPLVRALLEDFQARRISVMADDWDLRQFELLVEMLGRAGHTDSYLPD 153 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 S ++ +++ + P + L WA +ER LAR E G+SF QWR +++L+ Sbjct: 154 SKDRQLEPILQAIRLFPADNTPLKTWAERVHSTERTLARRFQHELGMSFVQWRNRVRLLR 213 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 AL L + ++Q +A LGY + +AFI MF+K +G +P RY Sbjct: 214 ALVWLKEDCSIQDIALALGYGTPSAFIAMFRKQIGFSPQRY 254 >UniRef50_C8QCP4 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QCP4_9ENTR Length = 259 Score = 113 bits (282), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 105/225 (46%), Gaps = 1/225 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL-CFLFIEPS 94 H H GQ+I + VE + P +WIP G HS+ + F Sbjct: 34 HAHAWGQVIFVKSHVLEMEVEGERLLTPADMPIWIPPGHRHSSYNHRQSLFRTFNLATDL 93 Query: 95 AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 +P C L + + ++ A R Q RL +VL D L P Q+ +LP Sbjct: 94 CDGLPQQACLLNVDTIVHAIMDEFARRGLEQPLSDADWRLCEVLGDRLRLAPVQKSYLPG 153 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 S+ + ++ + P + L QWA +ER LAR ++ +SF +WRQ+L+ + Sbjct: 154 SNDKLLAPILHALQVHPGDNTTLAQWAKRVFTTERTLARRCQQQLNMSFSEWRQRLRFLR 213 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 A+ L +G +VQ +AH LGY S +A I MF+ G TP RY +RL Sbjct: 214 AITLLEQGISVQAIAHELGYSSASALIVMFQHQAGTTPDRYRSRL 258 >UniRef50_A3QGH9 Transcriptional regulator, AraC family n=1 Tax=Shewanella loihica PV-4 RepID=A3QGH9_SHELP Length = 262 Score = 113 bits (282), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 2/222 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H QLI A G + + E + W++ PQ A+W+P + H + L ++ +P A Sbjct: 36 HWHHAAQLIYAESGVMELSCEESFWIISPQQALWMPAELPHRLKARGQVSLRSVYFQPDA 95 Query: 96 V--TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153 + +L +SPL REL+ + T++ + L+Q+L E+ + L LP Sbjct: 96 LPERFSKQPQSLVVSPLLRELMKSAMPVTSSSQPSSREVHLMQLLMSEIGWAQEIPLKLP 155 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 + +++ + + P L QW S R L+RL + G SF WRQQ ++ Sbjct: 156 MPKDNRLQKICLGLLADPGNDCTLSQWGEIVGASPRTLSRLFQTQLGTSFAIWRQQARIF 215 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 A+ L G+ + +VA +GYDS AF + FKK +G TP + Sbjct: 216 AAIPRLNLGEPIVRVAMEMGYDSAGAFASAFKKMMGVTPSEF 257 >UniRef50_Q7NRZ6 Probable transcriptional regulator AraC family n=1 Tax=Chromobacterium violaceum RepID=Q7NRZ6_CHRVO Length = 247 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/224 (31%), Positives = 110/224 (49%), Gaps = 4/224 (1%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H +GQL A GA+ + ++P WIP G+ H L +E + Sbjct: 25 HSHAEGQLAWASAGALELDADGRRILLPGGCVGWIPPGMPHGAHYHGELRGWSLQLEAAC 84 Query: 96 V-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 + +P + SPL + + L + Q RRL+ VL DEL L Sbjct: 85 LPALPPDLRVWRASPLLQGVFQRLGD-WPEQAGPDAARRLVAVLADELAWAEPYPASLAW 143 Query: 155 SSHPKIRTMVEMMAKGP-VEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 SHP +R + E +++ P ++W L +WA MS R+L R ETG+ +WR++L+++ Sbjct: 144 PSHPALRKLAEALSRDPSLDWD-LERWARQIGMSRRSLIRHFRAETGMGVAEWRERLRML 202 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 A L +G +V A LGY ++AFI F++ G+TPGRY++ Sbjct: 203 RARALLAEGRSVGYCAAELGYAGSSAFIVAFRRCFGETPGRYLS 246 >UniRef50_B5GYF3 AraC-family transcriptional regulator n=4 Tax=Actinomycetales RepID=B5GYF3_STRCL Length = 283 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 111/226 (49%), Gaps = 11/226 (4%) Query: 34 PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93 P H HR +L+ G +T + + ++ V Y +W+P G+ H + TA AEL F P Sbjct: 29 PPHAHRLHELVWVRGGTLTSRMGDRVYTVVEGYGLWMPAGMVHEGRATAQAELFHAFFAP 88 Query: 94 SAVTMP-TTCCTLKISPLCRELI--LTLANRTTTQRAEPMTRRLIQVLFDEL-PQQPQQQ 149 + T + ++PL L+ L+ A+ RA R V+FD + P + Q Sbjct: 89 DRIPFAFTEPMAITMTPLLESLLTHLSCADIDGEARA-----RAESVVFDVIRPSERQFA 143 Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209 L LP P+I + E + P + +L +WA S+R + R + TGL F QWRQ Sbjct: 144 LRLP--GDPRIDAIAEALLDDPSDGRSLEEWARLLGTSDRTITRAFRQATGLPFAQWRQM 201 Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 L++ AL L + V V+ LGY ++FI F++ +G TPG + Sbjct: 202 LRVHRALMLLAEDIDVTTVSEVLGYAQPSSFIVAFRRVMGITPGAF 247 >UniRef50_Q3JG82 AraC family regulatory protein n=50 Tax=Proteobacteria RepID=Q3JG82_BURP1 Length = 902 Score = 112 bits (280), Expect = 1e-23, Method: Composition-based stats. Identities = 76/231 (32%), Positives = 119/231 (51%), Gaps = 8/231 (3%) Query: 30 ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89 E T+ H H +GQL+ A G ++ +++ W+VP +AVWIP HS + + Sbjct: 118 ERTTARHSHARGQLVGASSGLVSIGLDDEDWVVPAIHAVWIPPHRVHSLRSFGPFAGWSV 177 Query: 90 FI-EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTR---RLIQVLFDELPQQ 145 F+ E +P + +S L RE + R + R + R+ V+ DE+ Sbjct: 178 FVAEDRCAALPGAPRAIVMSTLLREAV----RRAASWRGAALDAARARIANVILDEIAAA 233 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 LP P++R + + +A + +WA + M+ R L+R V ETG +F Q Sbjct: 234 QTGPRGLPRPRDPRLRRIADALAGDLADNRRADEWAAWAGMAPRTLSRRFVSETGFTFTQ 293 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 WRQQ +++ AL+ L G TV VA LGYD+ +AFI MF++ LG TPG+Y+ Sbjct: 294 WRQQARVLRALERLADGVTVTAVALDLGYDNVSAFIDMFRRTLGTTPGQYV 344 >UniRef50_Q7VTI7 AraC-family regulatory protein n=3 Tax=Bordetella RepID=Q7VTI7_BORPE Length = 275 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 68/230 (29%), Positives = 107/230 (46%), Gaps = 13/230 (5%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H + Q + G + LW+VPP A+WIP H ++++ ++ L+I+ + Sbjct: 35 HWHDRAQFLCGSSGVMRVATRRRLWVVPPMRALWIPARTVHEIRMSSAVDMRSLYIDAAL 94 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRR------------LIQVLFDEL 142 V MP C L ++ L REL++ + + R P L ++ EL Sbjct: 95 VRGMPDDCAVLDMTALMRELVVRASTDAPSTRDAPQRHEASDGALDEEYGLLSALMVAEL 154 Query: 143 PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202 + P+ L LP+ +R + E + + A +S R L R + ETGLS Sbjct: 155 RRLPRCGLDLPLPESAALRGLCERALADLSAFDSAQAQARRLKLSARTLYRRFLDETGLS 214 Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252 F +W QQ +L+ A++ L G V VA LGY S +AF MF + LG +P Sbjct: 215 FARWIQQARLLDAVRRLGDGQAVTDVALDLGYQSPSAFTAMFNRALGCSP 264 >UniRef50_Q2BQ21 Transcriptional regulator, AraC family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQ21_9GAMM Length = 235 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 71/224 (31%), Positives = 111/224 (49%), Gaps = 1/224 (0%) Query: 34 PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93 P HQH QL+ A G + V +PP+ AVWIP G EH + L L+IE Sbjct: 8 PKHQHEWHQLLYATSGVLIVEVLGERLFIPPEKAVWIPQGHEHQVYSEYGSSLKSLYIEH 67 Query: 94 SA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152 S + T LKI+PL ++LIL + + + LI ++ L + L Sbjct: 68 SDQFSDWQTSKVLKITPLLKQLILEASTFSVHYSRQGYEAELIALMLASLHRLETDHDQL 127 Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212 P + + + +M + P + A ++S+R L R +KETG+S +QW QL+ Sbjct: 128 PWPASRDLYRLCQMFYEQPSLRKTTAKLAIELSVSKRTLERKFMKETGMSVQQWLLQLRF 187 Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 + +L+ L G ++ +A LGY S+ AFI MF+ G +PG++I Sbjct: 188 LKSLELLSAGYSITHIALELGYGSSAAFIHMFRDKTGVSPGQFI 231 >UniRef50_Q84HW2 Transcription regulator n=1 Tax=Rhizobium sp. TAL1145 RepID=Q84HW2_9RHIZ Length = 200 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 64/197 (32%), Positives = 107/197 (54%), Gaps = 2/197 (1%) Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTT--CCTLKISPLCRELILTLA 119 VPP A+WI +H V AE+ L+++P+ PT+ C ++++PL RELI + A Sbjct: 3 VPPTRALWIRANTDHKLSVARAAEIRVLYVDPAIGCAPTSSSCVVVEVTPLVRELISSCA 62 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 + RL +VL D++ + + LP+ + P+ +V+M+ + P L Sbjct: 63 GLPWDYQPGSKEARLCEVLLDQIATLDRSPVDLPIPTDPRGLRIVDMLKREPSSREPLAA 122 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 A S R + R+ V+ET L+F WRQ+L+L+ AL+ L G+ V VA +GY+S ++ Sbjct: 123 LAARVGASSRTIERIFVRETHLAFGAWRQRLRLLAALELLAYGEAVTNVALDVGYESASS 182 Query: 240 FITMFKKGLGQTPGRYI 256 F+ F++ G TP R+ Sbjct: 183 FVAAFRETFGTTPARFF 199 >UniRef50_C8QEY4 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QEY4_9ENTR Length = 260 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 114/221 (51%), Gaps = 1/221 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS- 94 H H GQL HG + ++ ++ P QYAVWIP +H + + + ++I Sbjct: 32 HAHPWGQLNYVSHGVMHLEIDGIRFLSPSQYAVWIPPFADHFSFASRDLVYRTVYISLKL 91 Query: 95 AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 + +P+ TL +SP+ ++ A R R+ QV D++ + +LP Sbjct: 92 SNRLPSKPTTLNVSPVLHAILDDFALRDVRVPETEEDLRMAQVALDQILHIKPHETYLPY 151 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 + ++ ++++ + P + ++ +A M+ R L R +E G+SF +WR +L+ + Sbjct: 152 AVSDELNSVIKELQLNPGDRRSVEDFAEQLHMTSRTLERRCQRELGISFGEWRSRLKFMH 211 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 A++ L G TVQ++A LGY + +AFI MFK+ G+TP +Y Sbjct: 212 AIESLEAGLTVQRIALELGYTTPSAFIVMFKRFTGKTPEQY 252 >UniRef50_UPI0001B55F3C AraC family transcriptional regulator n=3 Tax=Streptomyces RepID=UPI0001B55F3C Length = 271 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 109/225 (48%), Gaps = 8/225 (3%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP-- 93 H+H QL A G +T + W++PP A+WIP G H+ T A + +++ P Sbjct: 43 HEHSAHQLAWAAAGTLTVDIGAHSWVLPPTLALWIPAGTPHTTSATRPALMRSVYLLPRH 102 Query: 94 SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ-QQLHL 152 S V P + + PL RELI LA+ EP R + L +L + + + + Sbjct: 103 SPVRRPGPTV-VTVGPLLRELITHLADTPL----EPGPRARAEALLPDLLRPVEVTTIEV 157 Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212 P+ + + E + P + +L +W S R LARL ETGLSF +WR + +L Sbjct: 158 PMPRDERALRVAEALVAHPADPRSLDEWGRLVGASARTLARLFSAETGLSFGRWRTRARL 217 Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 L+ + + VAH +GY S ++F+ F+ G+TPG Y + Sbjct: 218 RAGLEHMAVNRPLTAVAHRVGYTSPSSFVAAFRHETGRTPGAYFS 262 >UniRef50_B4EJY3 AraC family regulatory protein n=10 Tax=Burkholderia RepID=B4EJY3_BURCJ Length = 279 Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 2/225 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H QL+ A G + T + ++PP YA+WIP V H+ L+++ + Sbjct: 46 HSHPWAQLMYATSGVLEVTTPSGRQLLPPHYAMWIPPHVPHAVSTRDCVAFHSLYLDEAI 105 Query: 96 V--TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153 + C L ++PL REL++ L+ ++ D + + L +P Sbjct: 106 ARRDVNDDCTILCMTPLLRELMIATGELPVNYDEAGPDGALVCLIADRIARMQPAPLTVP 165 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 + P++ + + P + +L +W + R L+RL ++TGLSF +WRQ ++L+ Sbjct: 166 LPRDPRLLKIARALHAAPGDTRSLDEWGRQVGATRRTLSRLFRQDTGLSFTEWRQAVRLL 225 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 +L L G + VA LGYDST++FI +F TPG Y R Sbjct: 226 ASLPLLDAGAPIGTVAAQLGYDSTSSFIALFHAKFRVTPGAYAKR 270 >UniRef50_A6V4X5 Probable transcriptional regulator n=7 Tax=Pseudomonas aeruginosa RepID=A6V4X5_PSEA7 Length = 254 Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 75/234 (32%), Positives = 112/234 (47%), Gaps = 14/234 (5%) Query: 32 TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91 T+P H H GQL G + E +PP+ WIP G H+ + A L + Sbjct: 22 TAP-HSHACGQLYCLERGLLVVEDERGRQALPPRQIAWIPPGHRHAAH-SHGALLGW--- 76 Query: 92 EPSAVTMPTTCCTLKISP---LCRELILTLANRTTTQRA----EPMTRRLIQVLFDELPQ 144 SA + C L SP C + + + R T A L++VL DEL Sbjct: 77 --SAYLDTSHCHALPASPGVLACSDFVALIVERATRWPAGSAWSAERENLLRVLLDELRH 134 Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204 Q+ LP P++R + E + P + +WA + +S R+L+RL ETG+SF Sbjct: 135 AVPQRTRLPYPGDPRLRRIAEALLANPGDPRPAAEWARWAGLSSRSLSRLFGTETGMSFA 194 Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 QWRQ +L A++ L G V +VA +LGY+S ++F + F+ G+TP Y +R Sbjct: 195 QWRQLARLHAAVERLAAGQAVGEVAWSLGYESPSSFASAFRAVFGETPSGYSSR 248 >UniRef50_B6ELX6 HTH-type transcriptional regulator, AraC family n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6ELX6_ALISL Length = 275 Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 68/235 (28%), Positives = 114/235 (48%), Gaps = 4/235 (1%) Query: 22 FCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT 81 F I A T+ L H + GQL L G + V+ + P Y +W P +H Sbjct: 30 FFIEAKTETLP---HSYSWGQLHLIKQGVLEMEVDQQKMVCPANYTIWTPPHQKHRAFNR 86 Query: 82 ANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFD 140 ++ E C + I + P C + ++PL R +I L R TT + + L VL D Sbjct: 87 SDIEYCAINITAELSEKFPKHACMIPLTPLLRAIIDDLIERKTTMVSSEEDKCLSYVLMD 146 Query: 141 ELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETG 200 L + +++LP + + ++ + + P + +L WA +ER LAR KE Sbjct: 147 RLVKINPIEIYLPSTQDKLLAPILTQLEETPEDDSSLSVWAKRVFSTERTLARRFQKELK 206 Query: 201 LSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 +SF WRQ+ +L+ A+ L + ++ ++A+ LGY ++FI MF+K G TP ++ Sbjct: 207 MSFNDWRQRAKLVKAMTLLKESISINEIAYQLGYSQGSSFIKMFRKHTGVTPEQF 261 >UniRef50_A5U9G2 AraC-family transcriptional regulator n=12 Tax=Mycobacterium tuberculosis complex RepID=A5U9G2_MYCTA Length = 263 Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 8/223 (3%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H+H Q++ GA++ T W+ P A+WIP G H ++ + + + ++P Sbjct: 25 HRHPSHQIVYPSAGAVSVTTHAGTWITPVNRAIWIPAGCWHQHKFHGHTQFHGVALDPQR 84 Query: 96 VTM-PTTCCTLKISPLCRELIL--TLANRTTTQRAEPMTRRLIQVLFDELPQQP-QQQLH 151 P T L ++PL REL++ + A+RT T R++ VL D+LP ++ L Sbjct: 85 YRGGPATPTVLAVNPLMRELVIACSQADRTDTDEHH----RMLAVLQDQLPTTSIREPLW 140 Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211 +P + ++R ++A + L Q G +S+R L+RL E G++F QWR QL+ Sbjct: 141 VPSPTDRRLRHACALIADNLTQPLTLQQIGGRIGVSQRTLSRLFSDELGMTFPQWRTQLR 200 Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 L AL L + V VA G+ + +AFI +++ G TPG+ Sbjct: 201 LQHALVLLAERHDVTSVASECGWATPSAFIDTYRQAFGHTPGQ 243 >UniRef50_Q2L001 AraC-family transcriptional regulator n=4 Tax=Bordetella RepID=Q2L001_BORA1 Length = 258 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 117/223 (52%), Gaps = 1/223 (0%) Query: 34 PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93 P H HR+ QL+ A+ G + W+VPP VW+ G+EH +++ ++ +F+EP Sbjct: 34 PRHCHRRAQLLYAVEGVMIVEARAGRWVVPPTRGVWLDAGLEHRVRMSGRVKMRTVFVEP 93 Query: 94 SAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152 AV +P C +++ PL RELIL A + L+++L EL P+ L+L Sbjct: 94 DAVAHLPQGGCVVEVPPLLRELILAAALLPLSYEDTGRDGLLMRLLLAELAAIPRLPLYL 153 Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212 P ++R + + +++ + WA +S R L R ++ETG++F +WRQ +L Sbjct: 154 PWPQDKRLRALCDALSRDLAQVHEAAYWAEQMQVSTRTLHRAFLRETGMTFGRWRQHARL 213 Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 + AL+ L G+ + +A GY S +AF MFK+ G P + Sbjct: 214 LSALERLAHGEKILSIALDHGYTSQSAFSAMFKQHFGVPPSAF 256 >UniRef50_Q47UH5 Substrate-binding transcriptional regulator, AraC family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47UH5_COLP3 Length = 272 Score = 110 bits (274), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 111/222 (50%), Gaps = 2/222 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 HQH Q+ G + V ++ +++P ++IP H + V + + +++ P Sbjct: 37 HQHPWHQIAFPFEGILQTKVADSQFVIPHSGMLFIPANTPHESFVVTDTKFIGIYLNPQF 96 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQ-RAEPMTRRLIQVLFDELPQQPQQQLHLP 153 P T + ++P REL+L + + + +E +L+ VL D++ Q+ L Sbjct: 97 QNHFPLTAKAISVTPFLRELVLHINHGVSNSIVSEEELSKLVAVLIDQISSGESYQMKLL 156 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 + S ++ + + + P L WA SER L+RL KE G++F WRQ L+L+ Sbjct: 157 LPSDRRLMIIFKALMTDPQLNTKLSDWAKQVGASERTLSRLFTKELGMTFPLWRQHLRLV 216 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 +L L +VQ++A +GY++ ++FI FKK QTP +Y Sbjct: 217 SSLNLLETNLSVQEIAFKVGYNADSSFIYAFKKLFQQTPQQY 258 >UniRef50_Q01YV9 Transcriptional regulator, AraC family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01YV9_SOLUE Length = 257 Score = 110 bits (274), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 73/223 (32%), Positives = 107/223 (47%), Gaps = 5/223 (2%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI---- 91 H+H QL+ A+ G++T W++PP AV+IP HS ++ + L+ Sbjct: 35 HEHPWRQLLYAISGSMTVYAGRWSWIIPPGKAVFIPADCRHSMRMWGQVAMRSLYFPAAW 94 Query: 92 EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151 E SA P C L ++PL RELIL + P RL +L DE+ P L Sbjct: 95 EVSAFASPE-CFVLSVTPLLRELILRVIEWAALDSRVPEHARLAALLVDEIACAPVTPLL 153 Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211 LP+ + + + + P +L A A R L RL ETG+SF WRQQ + Sbjct: 154 LPLPIDARAAAVAQSVLASPARNDSLDDLARRHATGRRTLERLFRDETGMSFGMWRQQAR 213 Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 L+ ++ L +G V + A GY S +A+I FK+ G TPG+ Sbjct: 214 LLHSVGALAEGKPVTEAALDAGYASLSAYIAAFKRTFGCTPGK 256 >UniRef50_C6DFV4 Transcriptional regulator, AraC family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6DFV4_PECCP Length = 273 Score = 110 bits (274), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 64/231 (27%), Positives = 120/231 (51%), Gaps = 13/231 (5%) Query: 33 SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92 +P H+H++GQL+ A+ G + ++ W++PPQ ++W+P HS + ++ EL L+ Sbjct: 39 NPSHKHKRGQLLYAVKGVMLVQTDSRQWVIPPQRSLWLPAEQWHSFTLLSHTELRTLYFT 98 Query: 93 PSAVTMPTTCCTLK------ISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146 PS V TL ++P + LI +L ++ + + +L+ + +E P Sbjct: 99 PSFVAETCGMKTLDHIHVIGMTPFAQHLISSLFEQSFNHSTQKLIAQLLLRIVNETEALP 158 Query: 147 QQQLHLPVSSHPKI-RTMVEMMAKGPVEWG-ALGQWAGFFAMSERNLARLIVKETGLSFR 204 + L + K+ R +++ W +L ++A AMSER +R ++TG SFR Sbjct: 159 ---VDLAMPCDDKLHRVAQDILVNN--RWNVSLSEFAELVAMSERTFSRYFTEDTGCSFR 213 Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 W+Q+ ++ +++ L G V+ VA+ LG+ ++FI F+ GQTP + Sbjct: 214 TWKQRARIFVSMDLLSNGMPVKNVAYKLGFSCPSSFIAAFRTVTGQTPSCF 264 >UniRef50_B1LVX0 Transcriptional regulator, AraC family n=3 Tax=Rhizobiales RepID=B1LVX0_METRJ Length = 272 Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 1/215 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H + QL+ A G + ++ W+VP +A+WIP + H+ +C +++P+A Sbjct: 47 HFHPRAQLLYATSGLMMAFADDGTWVVPEGHALWIPPRLPHAVATHGAVSMCSAYLDPAA 106 Query: 96 V-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 V + P +C + +S L + LA + L ++ DE+ + P L LP+ Sbjct: 107 VRSFPASCRVIAVSRLMASALTALAEEPVLYAVDGRGGHLAALVLDEIGRAPATPLALPL 166 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 P++R + + + P L WA S R L R ETGLSF WR + ++I Sbjct: 167 PRDPRLRRVCLALIEDPASEADLDAWADRAGASRRTLTRGFRAETGLSFGDWRARARVIR 226 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 AL +G + VA +GY S A T + LG Sbjct: 227 ALALAAEGRPPRAVAAAVGYRSAQALRTTVARVLG 261 >UniRef50_A0KHN7 Transcriptional regulator, AraC family n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KHN7_AERHH Length = 268 Score = 109 bits (273), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 72/241 (29%), Positives = 123/241 (51%), Gaps = 2/241 (0%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 D ++P H H GQL L G + +++ + P Y +W+P +EH++ + Sbjct: 28 ADSASAP-HSHPWGQLSLISLGVMEIVLDDHRLVAPADYLIWVPADLEHASYNQQALDYT 86 Query: 88 FLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146 +++ + A +P L+++PL R ++ +R + R ++L ++L + Sbjct: 87 SIYVNHALAARLPAEPRLLQMTPLIRAILADFCDRKLGHMEDEWDVRQAELLVEKLTRTR 146 Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206 Q +LP+S + M+ + P + L QWA +ER LAR V+E G++F QW Sbjct: 147 CQDSYLPMSQDKLLAPMLAALHSDPADPRTLAQWAEQLHTTERTLARRCVRELGMNFGQW 206 Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQS 266 R +L+L+ AL L VQ++ LGY ST+AFI MF + LG +P RY +L + Q+ Sbjct: 207 RARLKLLKALAWLKGELPVQEIGWRLGYGSTSAFIAMFNRELGCSPQRYRQQLGIGAGQA 266 Query: 267 A 267 A Sbjct: 267 A 267 >UniRef50_A9BNM6 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria RepID=A9BNM6_DELAS Length = 310 Score = 109 bits (273), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 80/279 (28%), Positives = 128/279 (45%), Gaps = 41/279 (14%) Query: 18 AAVAFCIHAGTDELTS----PV---------------HQHRKGQLILALHGAITCTVENA 58 AA C HAG EL + PV H H QL+ A+ G + + Sbjct: 31 AAAVPCSHAGLPELQAAAPLPVTGVAADYPAGLEVEEHSHECCQLLYAVQGVLEVRAGSG 90 Query: 59 LWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILT 117 W+VPP VW+ GV H ++ ++ LF++ +A +P T C +++SPL RELI Sbjct: 91 RWVVPPTRGVWLRSGVPHGLRMRGAVQVRSLFVDAQAAADLPGTDCVIEVSPLLRELISE 150 Query: 118 LANRTTTQRAEPMTRR---LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEW 174 +A + P RR ++++L EL Q P HLP ++ + +A+G Sbjct: 151 VARWPASA---PPGRRESMVVELLLQELRQPPVVPFHLPWPQDARMAAVCHALAEGEGAD 207 Query: 175 GALGQWAGF---------------FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGL 219 G A AM E+ R ++ TG+SF +WRQ+ +L+ ++Q L Sbjct: 208 GFATAAAAADIGAATATAADWAARLAMGEKTFHRHFLQATGMSFGRWRQRARLLSSMQAL 267 Query: 220 VKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 + G + +VA GY+S +A+ F++ G P + AR Sbjct: 268 LAGRPIVQVALEAGYESHSAYSLAFRRQFGMPPSAFGAR 306 >UniRef50_D0L975 Helix-turn-helix-domain containing protein AraC type n=3 Tax=Corynebacterineae RepID=D0L975_GORB4 Length = 259 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 3/219 (1%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H Q++ A G + T + W+ PP A+WIP H ++ N E + IEPSA Sbjct: 35 HHHLTHQIVYASSGLVEVTTQAGTWVAPPDRAIWIPALAWHEHRFYGNTEFNCVSIEPSA 94 Query: 96 VTMPTTC-CTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 + ++ L RELI+ + T+ P +RL VL D+L + + L L Sbjct: 95 RPFADDAPVVVAVTGLVRELIVEGSR--TSDPTCPAQQRLRSVLLDQLRRTDETALSLRT 152 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 S ++ ++ +L S+R L+RL+ E GL++ QWR ++L Sbjct: 153 PSDDRLVHACAIVTADLTRNHSLADLGRTVGASKRTLSRLLRDELGLTYPQWRTSVRLHR 212 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253 AL L +G V +VAH G+ + +AFI +++ LG TPG Sbjct: 213 ALILLAEGAGVTEVAHRCGWATPSAFIDAYRRVLGHTPG 251 >UniRef50_D1BCS3 DNA-binding domain-containing protein, AraC-type n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BCS3_SANKS Length = 310 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/223 (29%), Positives = 113/223 (50%), Gaps = 3/223 (1%) Query: 38 HRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT 97 HR+ +LI A G++T ++ LW VPP +WIP H + ++ P V+ Sbjct: 85 HREHELIWATAGSLTVETDDQLWTVPPGLGIWIPALTRHHVRAAPGTLTHVTYLAPERVS 144 Query: 98 MPTTCCTLKISPLCREL-ILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSS 156 P+ + L R + L L N+++T + + RL QV+ D L L + + + Sbjct: 145 -PSWGAGIAGVTLSRAVHELVLHNKSSTLDDD-VRLRLQQVVVDLLVPVESASLDITMPT 202 Query: 157 HPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMAL 216 ++R++ + + P + L +WA +S R L+R V+ETG++ +WR +++ AL Sbjct: 203 DLRLRSVADAIVADPADDRTLTEWADTLNISSRTLSRGFVRETGVTLTRWRILVRMRQAL 262 Query: 217 QGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 + G +V VAH LGY + + F +F++ LG TP Y+ L Sbjct: 263 LEISSGRSVAAVAHRLGYANPSTFTDLFRQTLGHTPAAYLRSL 305 >UniRef50_B4SPX2 AraC protein arabinose-binding/dimerisation n=2 Tax=Stenotrophomonas maltophilia RepID=B4SPX2_STRM5 Length = 266 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 9/256 (3%) Query: 6 NLNGYEPDRHHEA----AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 ++ +PD H +A A I A + S HQH + QL+ G T + + + Sbjct: 4 DMAWLQPDAHFDADAWSAPVLGIAASLADHDSGWHQHARAQLLYTRQGCTRLTYGDRISL 63 Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLAN 120 +PP A WIPGG+ H Q+ + L+ + + + +P + + PL + L+ +A Sbjct: 64 LPPARAAWIPGGLRHRAQMRQAVDYRSLYFDATLSAQLPRQPAIIGVGPLLQALLEPIAQ 123 Query: 121 RTTTQRAE-PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 Q + P + + E+ P + LP+ P+I + + + P E LG+ Sbjct: 124 APFDQDWQAPRAHHQLALCVLEIAAAPVAPMDLPLPRDPRIARCLPLAEQLPPE---LGE 180 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 A +S R + RL+ ++TG+S++ WRQQ +L+ A++ L+ G V VA G+ + + Sbjct: 181 LAARTGLSARTVGRLMQRDTGMSYQAWRQQWRLMRAMELLLLGHRVAHVAQDTGFSAESP 240 Query: 240 FITMFKKGLGQTPGRY 255 FI F+ G TP + Sbjct: 241 FIAFFRSMTGTTPAAF 256 >UniRef50_C1MBM6 Transcriptional regulator n=2 Tax=Citrobacter RepID=C1MBM6_9ENTR Length = 261 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 2/224 (0%) Query: 34 PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93 P H H Q A G++ V W++P Y +WIP EH+ + L L I+P Sbjct: 38 PQHSHSFMQFHFARKGSMRIDVAGKCWIIPAHYGIWIPNNTEHAVWALDDVYLENLDIKP 97 Query: 94 SAVTMPTT-CCTLKISPLCRELILTLANRTTTQ-RAEPMTRRLIQVLFDELPQQPQQQLH 151 + C + IS RE I N + ++ +L+ VL D + Q P+ Sbjct: 98 GFLEESINECKVVAISDFAREFIHYATNSISGHYDSQSKEGKLVSVLVDIILQLPEVAFV 157 Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211 LP ++ + + + P ++ WA MS R +R KETGL F W+Q+++ Sbjct: 158 LPWPQDRELTKVCRTIQESPALEHSVEYWAQHLGMSARTFSRHFKKETGLPFSVWKQKMR 217 Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 ++ ++ L K +V VA +GY ST AF F++ G P Y Sbjct: 218 ILESVLMLKKNKSVTAVALDVGYSSTAAFSYAFRQAFGVPPSNY 261 >UniRef50_B4SMW0 Transcriptional regulator, AraC family n=3 Tax=Stenotrophomonas RepID=B4SMW0_STRM5 Length = 265 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 116/221 (52%), Gaps = 2/221 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 HQH +GQL+ A G + ++ W++P + WIP + H+ + L+ A Sbjct: 39 HQHARGQLLGAQQGLLRIAADDLHWLLPAGHVAWIPPLLPHALLSADGFDGWSLYFNAEA 98 Query: 96 -VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 + +P+T + + L + + A R + + RL V+ DE+ L LP Sbjct: 99 CLGLPSTPRIFQPNALLQAATIR-ALRWPHRPLDAAQARLAGVIADEIAASTPLPLALPQ 157 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 +++ + +A+ P + ++ WA +S R+LAR + ET ++ QWRQ+L++++ Sbjct: 158 PRDRRLQKIAAALARAPHDNRSIEDWATRSGLSSRSLARHWLAETHMTLSQWRQRLRVLL 217 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 AL L+ G+ V VA ++GYD+ +AFI +FK+ +G TP RY Sbjct: 218 ALPRLLSGEPVISVALSMGYDTPSAFIAVFKREMGVTPARY 258 >UniRef50_B4SKF1 Transcriptional regulator, AraC family n=2 Tax=Stenotrophomonas maltophilia RepID=B4SKF1_STRM5 Length = 267 Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 3/222 (1%) Query: 36 HQHRKGQLILALHGAITCTVENALWMV-PPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 H H GQ G + ++ WMV PP YA+WIP G+ H ++ + ++ P+ Sbjct: 40 HSHPWGQFNFVAQGVMEMKIDGE-WMVSPPHYAIWIPPGMAHYSRNRSALAYRSAYLSPA 98 Query: 95 -AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153 + +P C L++SPL REL+ LA + T P +R+ V+ D++ LP Sbjct: 99 LSRRLPVRCHALEVSPLLRELLHELAQQGVTDPKTPAQKRMAAVVIDQIVNAAVLPSFLP 158 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 V+S ++ ++ + K ++ A MS R L RL E G+S WR +++ + Sbjct: 159 VASSDVLKQVMVHVEKHLSAAESVADIARRHHMSVRKLERLARSELGMSLGDWRGRVKFV 218 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 A + L + ++A LGY +AF MFK+ TP +Y Sbjct: 219 RATEALCTRRPISRIAEELGYSGVSAFAEMFKRHAQCTPDQY 260 >UniRef50_C3JWU5 Transcriptional regulator, AraC family n=4 Tax=Rhodococcus erythropolis RepID=C3JWU5_RHOER Length = 274 Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 67/233 (28%), Positives = 115/233 (49%), Gaps = 6/233 (2%) Query: 36 HQHRKGQLILALHGAITCTVENAL-WMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 H+H + +LI G + V + + W VPP +W+P G H+ + E + P Sbjct: 39 HRHPEHELIWGNSGGMLTVVADGITWEVPPSAGLWLPAGALHAVKAGPGTEFFCTYFRPE 98 Query: 95 AVTMPTTCCTL-KISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153 A P+ L +S L RE++L + R A R V FD L + +P Sbjct: 99 AHAAPSGVPGLFGVSALLREVLLHMHRRNMPDEARSRAER---VAFDMLQPLEVAAVEVP 155 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 + + P+ + E + P + +L +WA S R L R+ + TG++F QWR Q+++ Sbjct: 156 MPTDPRALFVAEALVANPADQRSLSEWALTAGGSVRTLTRVFAQGTGMTFAQWRIQVRVR 215 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQS 266 AL L G V V+ +GY++ +AF+ +F++ G+TPG + + +V+P+S Sbjct: 216 AALTYLAAGVPVSVVSRRVGYETPSAFVAVFRRVTGRTPGSMMNK-GSVAPES 267 >UniRef50_B2I1A9 AraC-type DNA-binding domain-containing protein n=8 Tax=Gammaproteobacteria RepID=B2I1A9_ACIBC Length = 262 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 103/227 (45%), Gaps = 2/227 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS- 94 H HR+ Q + A G + E+ W+V P VWIP G H ++ + L+IE S Sbjct: 32 HSHRRAQFLYAPEGLMKVETEDGQWLVLPYSGVWIPAGKPHRVWLSKVSTYS-LYIEVSN 90 Query: 95 AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 A C +++SPL +L++ + LI +L EL P L +P+ Sbjct: 91 APRQANYCEVIQVSPLLHQLLIQANQLPIDYQRAGRDGSLIDLLLYELEAAPALPLFIPL 150 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 + + + P + WA SER R ETG+SF+ WR ++ +I Sbjct: 151 PHNTLLSKQCADFMQHPDIHSSPKDWAHDHNKSERTFHRWFKTETGMSFQAWRNRVCIIY 210 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTT 261 AL L + ++ ++A +LGY+ + AF MF K +G P + R T Sbjct: 211 ALNALKENISITEIAFSLGYEHSAAFTAMFSKIMGYPPTHFQKRFHT 257 >UniRef50_C7JHN7 Transcriptional regulator AraC n=8 Tax=Acetobacter pasteurianus RepID=C7JHN7_ACEP3 Length = 265 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 1/227 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI-EPS 94 H H GQ+ + G + ++A W++ P+ +W+P + H + L+I E Sbjct: 38 HVHNNGQIFVVESGVMAVKTQDAYWLIGPEQLLWLPPRLAHEARSHGAITGWSLYIAEDR 97 Query: 95 AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 + + + L + L+ T + T L + +DE P Q L LP Sbjct: 98 CAFLVSKPFVADSTRLLSAQVERLSQNTQDTTWDARTACLAESFWDEFLSIPHQSLSLPF 157 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 +++ + + + P + WA MS R+ R +TG+ F WRQ+L+++ Sbjct: 158 PGDVRLKRVADALCANPADSRGQQDWADMAGMSLRSFVRYFTADTGMQFSAWRQRLRILN 217 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTT 261 A + L +G+ V VA +GY+S AF FKK G +P Y R T Sbjct: 218 AQEKLARGENVTHVAAAVGYESLGAFAAAFKKNTGYSPSTYAQRCMT 264 >UniRef50_Q28KW4 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28KW4_JANSC Length = 253 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 2/216 (0%) Query: 33 SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92 S H H + Q+I ++ G + E W VP + + +P G+ H+ ++ + + L++ Sbjct: 30 SDWHSHPRHQIIYSVSGLMMTDTEGVRWAVPSGFGLIVPAGIAHTTKMIGDVSIETLYVS 89 Query: 93 PSAV--TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150 PS+ + +C + IS + LI L R L Q++F EL P L Sbjct: 90 PSSRGRSAFESCRVVSISAMLASLISELCREELRDRNSRKAFHLRQLIFLELSDAPTSHL 149 Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210 + P++R + + + P + QWA S R+ R +T +FRQW Q+L Sbjct: 150 AVKYPVDPQLRRVCDALIADPANSWTIDQWAFEIGKSRRSFTRAFYSQTDQTFRQWTQRL 209 Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKK 246 + +ALQ +G +++++A LGY S + M +K Sbjct: 210 RCQLALQKRAEGQSLERIARDLGYGSRYSLEAMMQK 245 >UniRef50_D1BHF8 DNA-binding domain-containing protein, AraC-type n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BHF8_SANKS Length = 309 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 6/232 (2%) Query: 30 ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89 E+T P H+H + +L+ G+ + + W +PP AVW+P GV ++ A + + Sbjct: 43 EVTWPAHEHAESELLWCASGSASLEADGRRWTIPPSLAVWVPAGVRNAAGAAAGSLVRAT 102 Query: 90 FIEPSA---VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146 F + +A V +P + ++ R L++ R A RRL +V+ D L P Sbjct: 103 FFDVAATRLVDVPDVVTGVAMTDAVRVLLMHNHLRDLDDAAR---RRLHRVVLDLLVPVP 159 Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206 + L + +R + E + P + +WA + R LAR ETG++F +W Sbjct: 160 HESFDLLLPRTGHLRWVAESILADPGDRRTTEEWASRCGLHPRTLARQFHAETGVTFTRW 219 Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 R ++ A++ L G V V+ +GY S +AF+ F++ GQTP Y+ R Sbjct: 220 RILARMQWAIRELALGAPVLAVSRQVGYRSPSAFLAHFRELTGQTPTAYVGR 271 >UniRef50_A6SYJ9 Transcriptional regulator, AraC family n=2 Tax=Oxalobacteraceae RepID=A6SYJ9_JANMA Length = 249 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 66/238 (27%), Positives = 115/238 (48%), Gaps = 12/238 (5%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 +H HR+ QL+ A G + T W+VPP AVW+P G+EH+ + A+ E+ L I+P Sbjct: 16 LHVHREAQLLFASSGVMQVTTPKGHWLVPPARAVWLPPGIEHAVDMLADIEMRALLIQPE 75 Query: 95 AVTMPTTCCTLK------ISPLCRELIL-TLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147 + L+ + PL RE IL + QR + + L ++ Sbjct: 76 QLAQHPAAPRLQSEFVATVGPLLRETILGAFKADSHPQRLALLLELALFELVED----ED 131 Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207 + +P+ + R + +M+ P L A S R + RL ET L+F++WR Sbjct: 132 ARTFMPMPHDARARRVADMILADPANGSELELLAYSAGASARTITRLFPAETNLTFKEWR 191 Query: 208 QQLQLIMALQGLVKGDT-VQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSP 264 Q+ +++ A++ L G T ++++A LG+ S +F F++ +G TP + R + +P Sbjct: 192 QRARIMAAVEALGNGQTSIKQLALQLGFSSVASFGHAFRQIMGMTPSEMMRRSESAAP 249 >UniRef50_A8G994 Transcriptional regulator, AraC family n=12 Tax=Gammaproteobacteria RepID=A8G994_SERP5 Length = 255 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 73/252 (28%), Positives = 126/252 (50%), Gaps = 11/252 (4%) Query: 8 NGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYA 67 + ++PD + + + I A + S H H GQL+ + G + T+ ++ ++PP Sbjct: 8 DEFDPDAINNSVLG--IAAELAQHDSGPHWHNMGQLLFSQRGCMRITLNESICLLPPARI 65 Query: 68 VWIPGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELI--LTLANRTTT 124 WIP V H QVT A ++++ + L S L RE++ + LA+ TT Sbjct: 66 AWIPPLVVHRVQVTGVAGYRSVYLDNHRYPGLSPHLEVLSASSLLREVLERIALADFTTQ 125 Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184 + P + ++ V DE+ ++ LP+ ++R + M P L + A + Sbjct: 126 WESGP-SANILAVCLDEIRHAQRELTLLPLPKDRRLRQLAGMEEVPP-----LNELARYS 179 Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244 SE+ ++R+ KETGLS++QWRQQ +LI A++ L +G + +A L + S +AF T F Sbjct: 180 GASEKTISRIFRKETGLSYQQWRQQWRLIKAIELLAEGYGLSDIAGKLEFSSDSAFSTFF 239 Query: 245 KKGLGQTPGRYI 256 K G +P Y+ Sbjct: 240 KNMTGSSPRAYM 251 >UniRef50_C3JLV5 AraC-family transcriptional regulator n=2 Tax=Rhodococcus erythropolis RepID=C3JLV5_RHOER Length = 268 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 62/230 (26%), Positives = 111/230 (48%), Gaps = 10/230 (4%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 H+H + Q+ G + +W + ++ VW+PG V H + + + + P Sbjct: 42 AHRHPEHQIAWMSEGTMQIAAGGNVWHLHSEHLVWLPGTVLHDMTLLSAGCMIAAYARPD 101 Query: 95 ---AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI--QVLFDELPQQPQQQ 149 T L++ L +L+ LA+RT RRL+ ++L+D L P++ Sbjct: 102 LRPGGPRWTQPLVLEVDALSAQLLRHLADRTIDD-----ARRLMSQELLYDILAAAPERH 156 Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209 L V + ++ + P + LG+WAG +S + L R V +TG++F QWR + Sbjct: 157 DVLAVPRNAAASSVSARILADPADSRTLGEWAGELGVSSKTLMRAFVADTGITFGQWRTR 216 Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 ++ +L+ L +G+ V VA +GY +++ FI F++ G TP RY +L Sbjct: 217 ARMYASLEMLARGEGVNDVAPQVGYRTSSGFIAAFRETFGTTPARYGGKL 266 >UniRef50_A4CF02 Transcriptional regulator, araC family protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CF02_9GAMM Length = 265 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 3/222 (1%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H QL + G + + L++VPPQ A+W+P + H L L + Sbjct: 41 HAHPWSQLAYSSQGILQIETDQGLFVVPPQQALWLPPNMTHQITCQCPTRLRSLHFQ-DH 99 Query: 96 VTMP--TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153 +T P TL + PL + LIL + + + +R+I VL D+L P+Q +P Sbjct: 100 ITAPLGDAIQTLAVGPLLQALILEVCHWGRDYQLSTEKQRVIDVLVDQLVSAPKQDFFIP 159 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 + +++ +V P L +A S R L RL + + F QW+Q+++++ Sbjct: 160 NITDKRLQPIVSHFNHHPESKRTLNDFANQVGASTRTLHRLFLLNFAMGFNQWKQRIRVL 219 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 AL L + ++ +A TLGYDS ++FI FK+ +G P +Y Sbjct: 220 KALTLLDQDLPIKDIAATLGYDSDSSFIAAFKQQMGLPPKQY 261 >UniRef50_Q13VV8 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=Q13VV8_BURXL Length = 268 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 2/222 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H+H Q + A +G + +PP Y VWIP G H+ + EL L+IEP+A Sbjct: 41 HEHVWWQFLFARNGLMQVQAGATTLTLPPDYGVWIPPGCVHTLWIGEEVELESLYIEPTA 100 Query: 96 VTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTR-RLIQVLFDELPQQPQQQLHLP 153 V + + + R I + E R ++VL D L P +LP Sbjct: 101 VAIQDQEPRVVMVDEFVRAFIHHGCTSIPVKYDEDGADGRKVKVLLDSLQSLPDAPFNLP 160 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 + P++ + + P L + AG MS R R ++ TGL + WRQ+++L+ Sbjct: 161 FPTEPRLLEVCLTIQSAPHLAHTLDESAGLARMSSRTFTRHFLRATGLPYHTWRQRMRLL 220 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 +L+ L TV +VA T+GY + +AF FK+ G++P R+ Sbjct: 221 GSLEMLRSDITVTEVALTIGYSTPSAFTHAFKQLFGKSPSRF 262 >UniRef50_B5EUU3 Transcriptional regulator, AraC/XylS family n=29 Tax=Gammaproteobacteria RepID=B5EUU3_VIBFM Length = 260 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 64/235 (27%), Positives = 114/235 (48%), Gaps = 1/235 (0%) Query: 24 IHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTAN 83 I A S +H H+KGQL+ A G ++ + +++ ++PP AVWIP H +T Sbjct: 22 IAADVGRHDSGMHYHQKGQLLYAPEGCMSFALSHSMCVLPPTKAVWIPANTPHRAFMTNV 81 Query: 84 AELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELP 143 L+ + P +++ L R LI +A + + T + ++ Sbjct: 82 VAYRSLYFDCDKFPCPEDIVMIEVDELLRALINKMA-MWPWDKPKSETLHTTALFWESFY 140 Query: 144 QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203 + QQ LP+ + ++ T E + K L + S + + RL KETG+S+ Sbjct: 141 EAHQQPFSLPLPTGKRLITFSEQVQKPDFLAPDLQTLSKKIGASSKTITRLFKKETGMSY 200 Query: 204 RQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 ++W+QQ +++ +++ L + V VA L + S +AFI+ FKK +GQTP +I + Sbjct: 201 QEWKQQWRVLKSIELLCENTQVSDVAFQLDFSSDSAFISFFKKQVGQTPLAFIKQ 255 >UniRef50_A9BQK3 Transcriptional regulator, AraC family n=8 Tax=Burkholderiales RepID=A9BQK3_DELAS Length = 309 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 24/246 (9%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI---- 91 H H Q+ ++L G + + + PP AVWIP G+ H+ + A+L +++ Sbjct: 36 HSHSWAQIAISLDGVLHLSAPQGTLIAPPSKAVWIPPGLVHAVAMVEEADLVSIYVLQDD 95 Query: 92 ---EPSAVTMPTT-----------CCTLKISPLCRELILTLANRTTTQRAEPMT-----R 132 P +P+ C L++SPL RELI L ++ Q A Sbjct: 96 PAQGPVLPDLPSCGVACNPQDWARCRVLEVSPLMRELITALPKQSDDQPAPDAATLQREH 155 Query: 133 RLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192 L +L +EL + + L + + ++R + E + P + +L WA S R +A Sbjct: 156 HLSALLLEELRRASEVHLGVNMPQDKRLRMLCEAVVADPTQHESLADWAADTGASPRTVA 215 Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252 RL ++ G SF WRQQ+ L L +G +Q++A LGY S +AF M + +G P Sbjct: 216 RLFQQQLGCSFTTWRQQVVLAHGLSLAARGLPIQQIAAELGY-SPSAFSAMVHRTVGMPP 274 Query: 253 GRYIAR 258 R+ + Sbjct: 275 ARFFGQ 280 >UniRef50_C8QA12 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QA12_9ENTR Length = 282 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 7/225 (3%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE-LCFLFIEPS 94 H+H GQL G +T + ++ PP+ W+P EH+ + L E Sbjct: 48 HRHAAGQLYCLKQGLMTVNTPSGIFANPPRLVGWVPPHFEHAIVGPGQVQGWTVLIDEVL 107 Query: 95 AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 A +P + + L LA T RL QV DEL + Q L LP+ Sbjct: 108 AAPLPDHPVLMSCPAVLELLAERLATLTPALWGSERYHRLGQVFLDELYEATVQPLTLPL 167 Query: 155 SSHPKIRTMVEMMAKGPVEWGA---LGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211 P++ + ++ P + L +WAGF S R+L+R TG+S ++RQ + Sbjct: 168 PEDPRLLQIARLLIDSPSDMRTGPELARWAGF---SPRSLSRHWASATGMSLTKYRQTSR 224 Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 L+ +L+GL G++VQ+VA +G+++ +++I+ F+ G TPG+Y Sbjct: 225 LLKSLEGLAAGNSVQQVAWQVGFENVSSYISAFRHAFGSTPGKYF 269 >UniRef50_D1WVC3 Transcriptional regulator, AraC family n=3 Tax=Actinomycetales RepID=D1WVC3_9ACTO Length = 283 Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 4/227 (1%) Query: 38 HRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT 97 HR+ +L+ + G +T LWMVPP +W+P G H + +A A F+ P V Sbjct: 56 HREHELLWSTTGNVTVEAAGHLWMVPPSLGIWLPAGTPHRVRASAGAVTYATFLSPELVA 115 Query: 98 MP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSS 156 + + + L REL+L N + A RL +V D + L +P+ Sbjct: 116 VDWAGVVGIPMIRLLRELLLHNQNEEMSTEAR---LRLQRVGVDLIRPVRTVSLDIPLPK 172 Query: 157 HPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMAL 216 P++ T+ E + P + +WA +S R L R ++TG+S QWR +++ AL Sbjct: 173 TPELLTIAERIIADPADDRTTEEWARMIGLSGRTLMRWFQRDTGVSLTQWRILVRVRSAL 232 Query: 217 QGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVS 263 + G V V+ LGY + + FI +F++ G TP Y + V+ Sbjct: 233 IDIAAGKPVVAVSRRLGYANPSTFIDLFRQVTGHTPAAYFRSVNGVA 279 >UniRef50_Q212B5 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q212B5_RHOPB Length = 268 Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 6/233 (2%) Query: 29 DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88 D T +HQH G+L L G + N W++P + W+P EH T + + Sbjct: 35 DVFTRGLHQHPHGELFLLRAGYLKAQSPNGRWLIPAGHLCWVPPFTEHGAD-TDSTQGVR 93 Query: 89 LFIEPSAV-TMPTTCCTLKISPLCRELI--LTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 +++ P +P C ++ + L +I LT +RT EP +RL+ VL DE+ + Sbjct: 94 IYLAPELCGVLPRDSCVMRNTALILAVIDRLTAPDRTAKVLTEP-EKRLLGVLCDEIERA 152 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 + LP+ ++ E + P + L +A MS R+ R +TGLS + Sbjct: 153 RSTPILLPMPQDARLSRTAEKLLGSPNDQSDLDVFAAEAGMSRRSFTRNFKLDTGLSIGE 212 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 WRQ +L+ + L G +V + A LGYDS ++F+ + ++ G +P + +AR Sbjct: 213 WRQIARLMHGIDMLAAGKSVTETAFALGYDSISSFVALCQRHTGMSP-KLLAR 264 >UniRef50_A6VY36 Helix-turn-helix-domain containing protein AraC type n=2 Tax=Gammaproteobacteria RepID=A6VY36_MARMS Length = 258 Score = 103 bits (257), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 1/224 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP-S 94 H H Q++ + G + T+E+ +VP ++IP H + + +++ P S Sbjct: 31 HAHPWHQVLYPIAGLLQSTIESKSIIVPHNGMLFIPANAIHKSVSVTKTQFLAVYLNPKS 90 Query: 95 AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 + + ++P +ELI+ L + AE MT L+ VL D++ ++ L + Sbjct: 91 TESYGNNAKSCLVTPFLKELIVLLVKQGLDNHAEQMTTNLLCVLRDQIAIAESYEIPLLI 150 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 + ++ + + + P L +WA S R L+RL KE SF WRQ ++L++ Sbjct: 151 PNDRRLMAIFVELNQQPDLALTLSEWATKVGASPRTLSRLCAKEFNQSFAMWRQNIRLVL 210 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 +LQ L K ++Q +A LGY S +A+I FK QTP +Y R Sbjct: 211 SLQLLEKNMSIQNIALDLGYQSDSAYIHAFKGLFAQTPSQYRKR 254 >UniRef50_D1VIF5 Transcriptional regulator, AraC family n=1 Tax=Frankia sp. EuI1c RepID=D1VIF5_9ACTO Length = 250 Score = 103 bits (256), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 70/243 (28%), Positives = 105/243 (43%), Gaps = 15/243 (6%) Query: 15 HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGV 74 H A I AG D QL+ GA+T + W +PP A+WIP G Sbjct: 20 HPPGVAALPIQAGWD------------QLLYTASGAMTISTPAGSWFIPPHRALWIPDGA 67 Query: 75 EHSNQVTANAELCFL-FIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRR 133 + + + + A + L F P V P REL+L R +P+ Sbjct: 68 QATVRNRSPAAVRNLYFATPLGVAPPRAQAVAVPERFGRELLLHAVRRCPLDLGDPVHAA 127 Query: 134 LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193 L+ VL D+L P+ + LP S P+ + + P L A S R L R Sbjct: 128 LLTVLVDQLRGLPEASVWLPWPSDPRASDLATALVADPA--AGLTSLAHRVGASRRTLER 185 Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253 ETGLS WR++ +++ +L L G +V + A GY + +A++ FK+ LGQTP Sbjct: 186 AFGAETGLSLGAWRRRARILSSLDTLAAGASVTQAAIEAGYATPSAYVAAFKQELGQTPR 245 Query: 254 RYI 256 ++ Sbjct: 246 HFL 248 >UniRef50_C3X452 Putative uncharacterized protein n=2 Tax=Oxalobacter formigenes RepID=C3X452_OXAFO Length = 254 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/232 (28%), Positives = 108/232 (46%), Gaps = 7/232 (3%) Query: 31 LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTAN-AELCFL 89 + P H + + G + E W V P W+P + + + A +C Sbjct: 18 IAQPGHAQNESWFVYLEKGFLAVEDERGYWTVLPGRIGWMPPHFHYEIRAYGHVAGICAS 77 Query: 90 FIEPSAVTMPTTCCTLKISPLCR---ELILTLANRTTTQRAEPM---TRRLIQVLFDELP 143 +P L IS L E +T +P+ RL+QVL DEL Sbjct: 78 LTPLLCAGLPEIPSALAISSLVAPILERAVTWQPDGVGGVFQPLPARQERLLQVLLDELR 137 Query: 144 QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203 Q Q L + ++ + + K P E + +WA +S R+++R +ET ++F Sbjct: 138 YSSQGQARLLLPKDKRLNYLAREILKNPGERRTVEEWAERMRISSRSISRHFSRETNMTF 197 Query: 204 RQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 QWRQ LI+A++ L +G++V++ A ++GY++ +AFIT FKK GQTP ++ Sbjct: 198 AQWRQNASLIVAMKRLAEGESVREAARSVGYENVSAFITSFKKAFGQTPAQF 249 >UniRef50_C7I316 Transcriptional regulator, AraC family n=1 Tax=Thiomonas intermedia K12 RepID=C7I316_THIIN Length = 291 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 77/224 (34%), Positives = 108/224 (48%), Gaps = 3/224 (1%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 H H +G L L G + + P Q W+P GVEH+ Q F+ P Sbjct: 45 THCHARGTLFLLTEGLVIVETAQGRQLSPSQTIGWMPPGVEHAVQSYGPTAGFGAFLTPQ 104 Query: 95 AV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTR-RLIQVLFDELPQQPQQQLHL 152 +P + ++PL L+L A +TR RL+ VL DEL Q P + L L Sbjct: 105 FCGDLPAEPTSYPVNPLV-ALVLQKALSWPHDTPLDLTRMRLLLVLLDELRQSPARPLQL 163 Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212 P ++ ++ + L QWA + +S R+L+R V ETG+SF QWRQ +L Sbjct: 164 PWPQDARLLSIARALLGNIASPRTLEQWARWADISARSLSRKFVLETGMSFAQWRQWARL 223 Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 AL+ L G V+ VA +LGYDS +AFI F++ LG TP Y Sbjct: 224 TQALEWLATGRAVKDVALSLGYDSVSAFIKTFRQALGTTPSAYF 267 >UniRef50_Q13JN4 Transcriptional regulator, AraC family n=13 Tax=Proteobacteria RepID=Q13JN4_BURXL Length = 285 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 5/221 (2%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H Q++ A+ G + V +VPPQ AVW+P G +HS + + E+ L++ Sbjct: 40 HSHTWAQVLYAVSGVMWVEVGREALVVPPQRAVWLPAGTQHSIHMMSEVEMRNLYLHERN 99 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEP-MTRRLIQVLFDELPQQPQQQLH-- 151 V + +++ L RELI ++A T +P ++ EL P+ L Sbjct: 100 VGHLSRRSDVFEVNGLLRELITSIAEYEGTGARDPAYLDAAYRLAMLELAHAPRSSLRIA 159 Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211 LP +S ++ + + P + Q A S R LARL +E G+ F +WR+Q+Q Sbjct: 160 LPDASDRRLEALCRAVIDNPSIAISFEQHAASVGASVRTLARLFTRELGVGFAEWRRQVQ 219 Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252 L +A+ L +G V +A +LG+ ++ F MF++ LG P Sbjct: 220 LAVAVSWLAEGRPVSSIARSLGFQPSS-FSDMFRRELGAPP 259 >UniRef50_Q0B8S9 Transcriptional regulator, AraC family n=1 Tax=Burkholderia ambifaria AMMD RepID=Q0B8S9_BURCM Length = 261 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 69/228 (30%), Positives = 102/228 (44%), Gaps = 1/228 (0%) Query: 33 SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92 SP H H GQL+ GA + L + P A WIP + HS + ++I Sbjct: 30 SPRHVHSCGQLLYPERGAALLETPHHLVRLGPGQAAWIPPDLPHSILMGRPYRYHSVYIG 89 Query: 93 PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152 PT + +SPL +ELIL T + + +V+ E+ + P+ + Sbjct: 90 AGLYAEPTFSVS-HVSPLLKELILDAERWDDTDASSDVRFWKTRVIVAEIRRAPRVAAGM 148 Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212 P+ P+I + + P + LG WA SE+ L R VK TGLSF+QWR ++ Sbjct: 149 PIPDDPRISVICRALEIDPADARMLGDWARQVGASEKTLQRAFVKSTGLSFQQWRTHARM 208 Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260 AL G + VA +GY S A+ F++ G +PGR R T Sbjct: 209 TKALAMHRCGARLLDVAVAVGYSSEGAYAHAFRQFYGYSPGRMKPRST 256 >UniRef50_Q2KXY1 AraC-family transcriptional regulator n=5 Tax=Proteobacteria RepID=Q2KXY1_BORA1 Length = 274 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/235 (28%), Positives = 102/235 (43%), Gaps = 3/235 (1%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI--E 92 H H Q++ A+ G + T E + + P A W+P G EHS AE L++ Sbjct: 37 AHTHEWHQVVYAVSGVLMVTAEGRSFAISPNQAAWVPSGTEHSVGSFLGAEYRSLWLADH 96 Query: 93 PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152 P +S L + L++ A R+ +++ D+L + L L Sbjct: 97 PGGTLSKGGVAVFGVSALLKALLVEAATLQGNPDESGYFGRIYRLVLDQLCRASPISLVL 156 Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212 + +RT+ E + P + W MS R LAR ETGL+ R WR+QL+L Sbjct: 157 AWPASAALRTLCETLYNQPADPRGPDDWGRELGMSGRTLARKFFAETGLTLRDWRRQLKL 216 Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSA 267 A++ L G V +A LGY S ++FI F+ + +P Y R+ P A Sbjct: 217 FRAIELLESGLDVTAIALELGYGSASSFIFAFRSAMKCSPMAY-KRIRARDPAGA 270 >UniRef50_D1XNW1 Transcriptional regulator, AraC family n=1 Tax=Streptomyces sp. ACTE RepID=D1XNW1_9ACTO Length = 291 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 75/250 (30%), Positives = 113/250 (45%), Gaps = 27/250 (10%) Query: 22 FCIHAGTDELTSPV----HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77 F I AG + P H H +L+ G +T V + ++ V + +W+P G H Sbjct: 36 FAIVAGLRIPSVPTEWSPHAHPLHELVWVRGGTLTSRVRDRVFTVSTGHGLWMPAGTTHG 95 Query: 78 NQVTANAELC----------FLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRA 127 +VTA A F F EP A+ M +PL L+ L+ T Sbjct: 96 GRVTAGARFYEAFFAPDRAPFAFEEPRAIEM---------TPLLESLLNHLSR---TDLD 143 Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187 R V++D L Q ++Q L + +I + E + P + +L +WA +S Sbjct: 144 AAARARAESVVYDVL-QPSERQFALQLPGDARIDVIAEALLDDPADCRSLEEWARLLGIS 202 Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247 +R + R + TGLSF QWRQ L++ AL L +G V V+ LGY + FI F+K Sbjct: 203 DRTVTRAFRQATGLSFAQWRQALRVHRALALLSEGLDVTTVSEVLGYAQPSTFIASFRKV 262 Query: 248 LGQTPGRYIA 257 +G TPG + A Sbjct: 263 VGTTPGAFSA 272 >UniRef50_Q5LMG8 Transcriptional regulator, AraC family n=1 Tax=Ruegeria pomeroyi RepID=Q5LMG8_SILPO Length = 238 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/221 (29%), Positives = 99/221 (44%), Gaps = 4/221 (1%) Query: 29 DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88 D S H+H + QLI A+ G + + +PP Y + +P H ++ L Sbjct: 17 DGYVSVRHRHPRHQLIYAISGLMMAETDAMSHAIPPGYGLIVPAQQPHEIRMIGAVRLQS 76 Query: 89 LFIE---PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 L++ P A + C + ISPL +LI L P L Q++ EL Sbjct: 77 LYVRAGLPRADAL-ARCRLVTISPLLAQLIAALCEMANPWPMPPRALHLSQLILIELLAA 135 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 P L LP + P++R + + + P +L WA MS R +R ETGLSF + Sbjct: 136 PVSPLALPYPTDPRLRRVCDGLIATPASPRSLDDWAAEAGMSRRTFSRHFQLETGLSFGK 195 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKK 246 W Q+L+ AL+GL KG +VA LGY + M ++ Sbjct: 196 WAQRLRCQAALRGLAKGRPAARVARELGYANAYTMAAMMRR 236 >UniRef50_C6CCZ8 Transcriptional regulator, AraC family n=3 Tax=Dickeya RepID=C6CCZ8_DICDC Length = 282 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 66/222 (29%), Positives = 100/222 (45%), Gaps = 2/222 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 HQH + + A G + +E +VP Y VWIP V H T+N L L++EP Sbjct: 38 HQHPFVEFLYAREGGMRMEIEGKTLIVPVLYGVWIPANVPHQILATSNVLLESLYVEPEY 97 Query: 96 VTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTR-RLIQVLFDELPQQPQQQLHLP 153 + + + IS RE I Q E +++ VL L Q P LP Sbjct: 98 AAIDHDSSKVVVISDFVREFIHYATEHIPEQYDEAGDDGKMVDVLTTLLRQLPDAGFSLP 157 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 + + + + P + WA MS R +R KETG+SF +W+++L+L+ Sbjct: 158 WPESVVLVRVCRDIQQAPDAAHGIEAWAARTGMSVRTFSRRFRKETGVSFSEWKKRLRLL 217 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 ++ L +V +VA LGY ST +F F++ G P RY Sbjct: 218 ESIIMLKDNRSVTQVALDLGYSSTASFTFAFRQMFGVPPTRY 259 >UniRef50_D1BGA1 DNA-binding domain-containing protein, AraC-type n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BGA1_SANKS Length = 293 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 18/237 (7%) Query: 26 AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85 +G D S H H +L+ G +T + +MVP +WIP GV H+ Q Sbjct: 28 SGPDRWDS--HSHDVHELLWGAEGVLTVETADGYFMVPAVLGLWIPAGVAHAVQCAGGTG 85 Query: 86 LCFLFIEPSA---VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL----IQVL 138 +++ T TT T ++PL REL++ +A AEPM + + Sbjct: 86 FWCTYVDADVRPEFTGRTTAVT--VTPLLRELLVHMA-------AEPMRAEVRDASAALA 136 Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198 L + LP+ + ++ ++ + P + +L W ++S RNL+RL +E Sbjct: 137 VALLEAVDMSPMVLPMPTDARLASIARALLDDPGDRRSLDDWGTEVSVSVRNLSRLFHRE 196 Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 TG++F QWR ++ +A+ L G +V V+ +GY + +AF+ F++ LG TPG Y Sbjct: 197 TGMTFAQWRVHARVRLAVGLLASGLSVGTVSRRVGYSTPSAFVQSFRRVLGHTPGWY 253 >UniRef50_B9K583 Transcriptional regulator n=3 Tax=Alphaproteobacteria RepID=B9K583_AGRVS Length = 251 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 11/230 (4%) Query: 34 PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93 P+H H + QL A G + E W+VP Q AVWIP V H V +A+L + EP Sbjct: 20 PIHAHDEAQLTFAASGMVQVHTEEGRWLVPSQLAVWIPARVPHRVDVLTDADLWMVHWEP 79 Query: 94 SA-------VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146 SA V + T L+++PL + L+ ++ + +L + EL Sbjct: 80 SAAQEWAPPVPLDQTFA-LRVTPLMQSLLEAAFMADVSREKGELVAKL---MLHELTSTA 135 Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206 LP+ + + +M ++ ++A A S R L+RL ETGL+F+ W Sbjct: 136 HAPTFLPLPTSTIGLRVADMALTDHQSLMSIDEFASRAATSVRTLSRLFPSETGLTFKAW 195 Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 RQ+ +++ ++ L KG + +VA G+ S +F F++ TP +++ Sbjct: 196 RQRARIVQSMDLLAKGKPIARVAADFGFSSAASFSHAFRQVTAMTPTQFM 245 >UniRef50_B9TN09 HTH-type transcriptional repressor of iron proteins A, putative n=1 Tax=Ricinus communis RepID=B9TN09_RICCO Length = 221 Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 6/203 (2%) Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFL-----FIEPS-AVTMPTTCCTLKISPLCREL 114 ++PP WIP + H+ V N L + PS V P L++SPL L Sbjct: 19 VLPPGRLGWIPPLMPHAASVHGNTLRPGLAGHTIHLAPSLCVGFPAQSLALRMSPLAVSL 78 Query: 115 ILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEW 174 + + + RL+ V DE+ LHL + HP++ M +A+ P + Sbjct: 79 MERMFRWPNGTPPDAAGLRLMNVFLDEMRAAAPDPLHLVMPRHPRLLAMAATIAENPADE 138 Query: 175 GALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGY 234 L WA S R+L R ETG+S WRQ +L ++ L G +V VA +LGY Sbjct: 139 TDLDAWAQQLGWSRRSLTRHFRNETGMSVVAWRQVARLQKGMELLNGGASVTTVALSLGY 198 Query: 235 DSTTAFITMFKKGLGQTPGRYIA 257 DS ++FI +F++ LG TP R+ A Sbjct: 199 DSVSSFIALFRRILGTTPARFAA 221 >UniRef50_B5I4G1 AraC-family transcriptional regulator n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I4G1_9ACTO Length = 268 Score = 100 bits (248), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 4/219 (1%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H GQL A GA+ + W+ P +W+P HS++ ++ L + P Sbjct: 37 HFHDYGQLRYAARGALVTATQVGTWVTPASRIMWVPPFAVHSSKAYGETDIRVLSL-PVT 95 Query: 96 VT--MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153 +T +P S L RE L L + + P R LI V+ EL + Q+ L LP Sbjct: 96 LTGQLPAEPSVFVASALLREAYLALMSEGEPLES-PRARLLIDVVLAELARAAQEPLRLP 154 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 S +++ + +++ P L + SER L+RL E +SF QWR L++ Sbjct: 155 EPSDRRLKAVTDLLHMDPASPATLAELGHRAGASERTLSRLFGSELSMSFHQWRTLLRIQ 214 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252 AL L G +V A LG+ + ++FI F + +GQTP Sbjct: 215 RALIELSDGASVTATAIRLGWSNPSSFIDAFTELVGQTP 253 >UniRef50_A8L2S5 Transcriptional regulator, AraC family n=3 Tax=Actinomycetales RepID=A8L2S5_FRASN Length = 263 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 74/224 (33%), Positives = 101/224 (45%), Gaps = 10/224 (4%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV---TANAELCFLFIE 92 H H QLI G + W+VPP AVW+P GV H++Q T L F ++ Sbjct: 40 HDHTDHQLIYPGTGVLRVVTRVGSWVVPPLRAVWLPAGVAHAHQAHGPTHMHSLAFSDVD 99 Query: 93 -PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151 P PT + L RE+I L T T A R L VL L + +L Sbjct: 100 DPFGSPDPTVVA---VPALLREIIRAL---TATGLAGADRRDLTAVLLRSLRPVTELRLC 153 Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211 LP ++ + +A P + L + SER L+RL ++TG++F QWR QL+ Sbjct: 154 LPQPRDDRLVALTAALAADPADPRTLAELGAAVGASERTLSRLFRRQTGMTFPQWRAQLR 213 Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 L L L G+ V VA GY + +AF F+ G TP RY Sbjct: 214 LHHGLTLLAGGEPVTTVAFACGYSNPSAFTAAFRDAFGVTPARY 257 >UniRef50_C0YIN0 AraC/XylS family transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YIN0_9FLAO Length = 260 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 72/257 (28%), Positives = 126/257 (49%), Gaps = 14/257 (5%) Query: 9 GYEPDRHHEAAVAFCIHAGTDELTSPVHQHR-KGQLILALHGAITCTVENALWMVPPQYA 67 ++ D HE V I + S H H K QL+ A G +T T + ++PP Sbjct: 9 DFDADSIHEQVVG--IASDMVMHDSGFHFHTTKAQLLYAPSGCMTVTTSDRQLILPPFRM 66 Query: 68 VWIPGGVEHS---NQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTT 124 +WIP H + A + F + S M + L ++PL +E+I + Sbjct: 67 LWIPAHEVHRVNFRNIVAYRSIYFD-VSYSRKYMKSDLKVLHVNPLLKEIIERICFWEWP 125 Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVE---MMAKGPVEWGALGQWA 181 + T L++V +DE+ + P+++L L + + + E + P L Q A Sbjct: 126 ALSNDQTN-LLKVFWDEMSKAPEEKLELKMPQDKRFTKIAEEWTLRQSVPPMLKDLAQKA 184 Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241 G +E+ ++R+ KETGLS++ WRQQ +L +++ L +G+++ +V++ L + S +AFI Sbjct: 185 G---AAEKTISRIFKKETGLSYQDWRQQWRLQRSIELLAEGNSIGEVSYILDFPSDSAFI 241 Query: 242 TMFKKGLGQTPGRYIAR 258 FKK G TP +Y+ + Sbjct: 242 EFFKKHTGTTPLQYLLK 258 >UniRef50_D1BFL9 DNA-binding domain-containing protein, AraC-type n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BFL9_SANKS Length = 280 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/230 (24%), Positives = 112/230 (48%), Gaps = 10/230 (4%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H L G + +++A+W + P +W+P G H+++ + C+ ++ +A Sbjct: 44 HSHPDAMLAWCYRGTVWVYLQDAVWRLAPGQGIWVPAGTPHTSRHEPGSTGCYTYLPDAA 103 Query: 96 VTMPTTCCT-LKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL---- 150 + P T + ++ +E++L L + R IQ + E+ QQP Q Sbjct: 104 LVAPVATITRVLVARAVQEMLLHLG----ADDMDDGLRVRIQAVILEMLQQPSLQASDGW 159 Query: 151 -HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209 +P+ + ++R +V+ + P + + + ER + R++ ++ G++F +WR Sbjct: 160 GEVPLPADERLRPLVQAVLADPGDPRTARELFDAHGLHERTVLRVLQRDVGMTFARWRAG 219 Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 +++ A + LV G V VAH GY +T+AF FK+ G TP ++AR+ Sbjct: 220 VRMTQAARMLVDGTPVGLVAHRTGYGTTSAFSAAFKQRFGMTPREHVARV 269 >UniRef50_Q091X7 Helix-turn-helix, AraC type n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q091X7_STIAU Length = 279 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 74/252 (29%), Positives = 125/252 (49%), Gaps = 14/252 (5%) Query: 18 AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77 AA +FC+ LT+ H HR+ QL+ A GA+ V+ A W++PPQ A W+ GG H Sbjct: 12 AASSFCLTDEMPPLTTGWHAHRRHQLLYAARGALHLEVDRAQWLLPPQRAAWLRGGTLHR 71 Query: 78 NQVTANAELCFLFIEPSAV-TMP-TTCCTLKISPLCRELILTLANRTTTQRA--EPMTRR 133 + LC +++EPS V T P C + PL RE+++ + R +RA + + Sbjct: 72 ARANHLVTLCTVYLEPSLVPTAPQEECSVFLLPPLAREMLI-YSVRWGPERAPDDTVAES 130 Query: 134 LIQVLFDELPQQPQ--QQLHLPVSSHPKI-RTMVEMMA--KGPVEWGALGQWAGFFAMSE 188 Q L L + Q LP + P++ + M +A GP+ + + AG +S Sbjct: 131 FFQTLAHLLAEWSSQGQTWRLPRARTPELEKAMAYTLAHLAGPLSFEEAARAAG---LSG 187 Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKG 247 R LAR +E ++R++ +++ A++ L + G V + A+ +G++S AF F Sbjct: 188 RTLARRFDEEAQTTWRRFLHDARMLRAMELLAQDGARVTQTAYDVGFESLAAFTHAFHAF 247 Query: 248 LGQTPGRYIARL 259 G+ P + R+ Sbjct: 248 SGERPRDFRQRV 259 >UniRef50_A8AKK6 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC BAA-895 RepID=A8AKK6_CITK8 Length = 251 Score = 96.7 bits (239), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 3/230 (1%) Query: 32 TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ--VTANAELCFL 89 T+ H H GQL G + E W + P W+P + H V+A Sbjct: 16 TTQWHHHPGGQLYWITRGMVMVETEQGQWALTPGSVGWLPPSLPHCAWMPVSAYGASLHF 75 Query: 90 FIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ 149 +E V P++ C SP L+ + T L+QV+ DE+ Sbjct: 76 SVEYCGV-FPSSPCVRAASPFLLLLLEKICGEGTIGEPSERLAHLLQVMVDEIRCADALS 134 Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209 L + ++R + + + + + A +S R L+RL +++TGL+F QW+Q+ Sbjct: 135 SQLILPDDRRVRQIAQKILADRACTRSQAELAKQAGLSVRTLSRLFIQQTGLTFGQWKQK 194 Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 ++I +L+ L++G+ V VA GY++ +AFI +F++ +G TPG++ R Sbjct: 195 AKVISSLEYLLRGEPVSLVAQLAGYENVSAFIAVFRRFMGMTPGQFYLRF 244 >UniRef50_C3JND7 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus erythropolis RepID=C3JND7_RHOER Length = 285 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 3/226 (1%) Query: 30 ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89 + T +H+H +L+ A+ G + ++ VP ++WIP V H + EL Sbjct: 46 DYTWEMHRHSDHELLWAIDGVLEVRTPETVYTVPSGVSLWIPSFVPHEVTARSGTELSCT 105 Query: 90 FIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ 149 ++ S VT L PL +++ L T + RR D + P+ Sbjct: 106 WLVASDVTGLDRVVALSTPPLLEQVLDHLTRDDLT---DAARRRAEAFAIDLVEPVPRLI 162 Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209 +P+ + P +R + + + P + ++ +WA +S R L R ETGL+F +WR + Sbjct: 163 FDVPLPTTPWLRQIADQLVASPADTRSVEEWAADAKVSTRTLTRRFPAETGLTFSEWRMR 222 Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 L+ A+Q L G ++ VA G+ S +AF F++ +G TPG + Sbjct: 223 LRAHHAMQLLALGRSISFVARKTGFRSESAFGAAFRRTMGVTPGEF 268 >UniRef50_Q5FU43 Transcriptional regulator, AraC family n=1 Tax=Gluconobacter oxydans RepID=Q5FU43_GLUOX Length = 259 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 14/231 (6%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H +GQ+ G + E+A W++ P +W+P + H + L++ + Sbjct: 32 HAHARGQIFGIESGVMAIRTEHAYWLIGPGQCLWLPPHIPHEARSHGAVAGWSLYVSAA- 90 Query: 96 VTMPTTCCTLKISPLCR---ELILTLANRTTTQ----RAEPMTRRLIQVLFDELPQQPQQ 148 C L P L+ LA+R + R + L + + E P+ Sbjct: 91 -----RCSNLPDEPFLAGGTRLLTALADRLSHDADETRWDAQISCLAECFWHEFLAAPRA 145 Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208 + LP + + ++ P + WA AMS R+ R ETGL F WRQ Sbjct: 146 SVSLPFPKSEQFCRVANTLSDNPADNRDQKDWAELAAMSLRSFVRHFTLETGLPFSVWRQ 205 Query: 209 QLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 +L+++ A + L +G++V VA +GY+S AF T F K G P Y ARL Sbjct: 206 RLRILNAQEKLARGESVASVALDVGYESLGAFATAFHKNTGYRPSDY-ARL 255 >UniRef50_A8U313 Helix-turn-helix, AraC type:Arac protein, arabinose-binding/dimerisation n=1 Tax=alpha proteobacterium BAL199 RepID=A8U313_9PROT Length = 282 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 3/247 (1%) Query: 15 HHEAAVAFCIHAGT--DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72 H EA VA HA + + P H+H +GQL L L + + +W+VP +W+P Sbjct: 22 HVEADVAIIGHAASFAPGASVPWHRHSRGQLALTLARVMRVETPDKVWLVPRGSVLWLPA 81 Query: 73 GVEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131 H + + L++ P SA ++PT ++ +++ LA + R + Sbjct: 82 ETPHRSLAPEQRLMRSLYVRPDSAESLPTAPTAVEQGTPLADMVTWLAETYDSDRLDKAW 141 Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191 + + P + LP + P + + + + P +L WA F M+ R L Sbjct: 142 STVAGAALALVRPGPGVSIRLPQPADPALAVIADAVLADPAVEISLEDWAERFGMAGRTL 201 Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251 R + ETG+S+R WR+ L L +A + L+ G V VA GY T+AF+ F+ T Sbjct: 202 RRRVQAETGMSYRDWRRILGLTVAAERLLAGSRVTDVAFETGYAGTSAFVAAFRAAFQVT 261 Query: 252 PGRYIAR 258 PG + R Sbjct: 262 PGEFQRR 268 >UniRef50_A0R133 Transcriptional regulator, AraC family protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R133_MYCS2 Length = 257 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 66/230 (28%), Positives = 107/230 (46%), Gaps = 3/230 (1%) Query: 30 ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89 E+ +P H+HR+ Q + + G + E+ W+VP + AV IP +H+ + + L Sbjct: 26 EVLAP-HRHRRAQFLYGVGGTMDVRTEHGSWLVPTERAVLIPPQTQHAVTMWGVSTRS-L 83 Query: 90 FIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQ 148 +IEP AV PT C + + L REL++ + + L + E+ Sbjct: 84 YIEPGAVPWFPTRCTVVDVPTLLRELLVAAVAVPLDRPPDARDAALFALTLHEVAGCTSL 143 Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208 L LP+ + P G WA +SER +ARL KE ++ +W++ Sbjct: 144 PLDLPLPQPGALSEQCRRFLAAPRIDTTTGWWANALHVSERTVARLFRKELSMTVAEWQR 203 Query: 209 QLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 + ++ +L+ L +G V VA LGY S AF TMF + LG +P + R Sbjct: 204 RACVLHSLRQLTQGVAVSAVASDLGYSSPAAFSTMFSRALGTSPSAFSPR 253 >UniRef50_D0J7V7 Transcriptional regulator, AraC family n=6 Tax=Proteobacteria RepID=D0J7V7_COMTE Length = 271 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 1/225 (0%) Query: 34 PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93 P H H +G LI A G + + W+VPP AVW+ G+ H T LF++ Sbjct: 39 PQHSHARGHLIYASEGVLLVESPSGQWLVPPTTAVWLRPGMLHQITATTAVRAYGLFVDE 98 Query: 94 S-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152 + + +P L ++PL REL+ L P L +L +EL +L Sbjct: 99 AWSAQLPARDGVLHVAPLVRELMTALVALPHEGPHRPRDALLGSLLLEELSALAPLPYYL 158 Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212 P +R + E M P + + A A++ + L R +K TG+++ +W QQ++L Sbjct: 159 PWPQDALMRRICESMLSAPAQRTTVEALARQHALTPKTLHRRFLKSTGMNWGRWYQQMRL 218 Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 + ++ L++G + VA GY+S +A+ F++ G+ P ++A Sbjct: 219 MASIPQLLQGMAITTVALESGYESHSAYSAAFRRQFGRPPSEFVA 263 >UniRef50_D1BBW6 DNA-binding domain-containing protein, AraC-type n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BBW6_SANKS Length = 257 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 6/220 (2%) Query: 38 HRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS-AV 96 H + +L+ AIT +W+VPP +W+P G H +A + +++ S V Sbjct: 32 HHEHELLWCAGRAITVEARGQVWLVPPTLGIWLPAGTVHRVTAHPDASVFAAYLDTSREV 91 Query: 97 TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL-FDELPQQPQQQLHLPVS 155 + + ++PL EL+L NR +R +Q L +++ + L + Sbjct: 92 PGWDSILGVPVTPLLHELLLH--NRRAAM--PDASRHALQALAVEQMVPLTAATIELRLP 147 Query: 156 SHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMA 215 +R + E + P + +L WA MS R R + +TG +F QWR ++ A Sbjct: 148 RDLALRGVAEQVVADPGDGRSLDAWASSIGMSPRTFMRRFLDDTGSTFAQWRILARVAAA 207 Query: 216 LQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 L L +G V VA +GY ST F+ +F++ G TP Y Sbjct: 208 LTMLAEGRAVATVARAVGYSSTGTFVALFRRTTGMTPAAY 247 >UniRef50_D1WSG5 Transcriptional regulator, AraC family n=3 Tax=Streptomyces RepID=D1WSG5_9ACTO Length = 265 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 8/226 (3%) Query: 34 PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93 P H H Q + G I T + P A+WIP GV HS + ++ + EP Sbjct: 40 PTHVHVFHQFLYVPLGRIVVTALGRDHELSPSVALWIPAGVPHSARFDPDSLVVAETFEP 99 Query: 94 SAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152 +P T ++ +S R+L+L+ + +P +F L + L L Sbjct: 100 DRHRLPYTEITSVNVSDAQRQLLLSRMRSSEVTEEDP-------AVFAVLCSGHRDVLPL 152 Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212 P + T+ + + P + +WA S +L R ETGL+F +WR +L+L Sbjct: 153 PRPTGRAAATVAGELMRNPGDPRTASEWAEGLYTSSTSLRRAFRAETGLAFSEWRTRLRL 212 Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 +L L G V VA +G+ ST +I F++ G+TPG Y+ R Sbjct: 213 NHSLHLLAAGHMVSTVAARVGFVSTNGYILAFRRYFGETPGAYVKR 258 >UniRef50_Q1ZV01 Transcriptional regulator, AraC family protein n=2 Tax=Photobacterium angustum S14 RepID=Q1ZV01_PHOAS Length = 283 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 62/240 (25%), Positives = 114/240 (47%), Gaps = 16/240 (6%) Query: 25 HAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANA 84 H L S +H H KGQL+ G +EN+ + + P +WIP G+ H+ + N Sbjct: 37 HKEEHSLRSKMHSHSKGQLVYIKSGTAIVRLENSTYSILPNQMIWIPSGMIHNVILRNNV 96 Query: 85 ELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQR----AEPMTRRLIQVLF 139 + ++I+ + T +S L E+I T+ + E + ++ + Sbjct: 97 DFRAIYIDQKQFPRLSKNFETFFVSVLLEEIIETICLSSFHTDWMVGTEFHLQSILIMKM 156 Query: 140 DELPQQPQQQLHLPVSSHPKIR----TMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 +L PQ + PK + +++ KG + + L + SER + RL Sbjct: 157 QKLSSTPQW------PAFPKDKRVCNYLLKFYEKGEM-FPRLYELVSNTGASERTIHRLF 209 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 V+ TG+S+++WRQ +L++A++ L ++ ++AH L + +T+AFI+ FK TP +Y Sbjct: 210 VQSTGMSYQKWRQHARLMLAIELLSTNKSITEIAHHLEFSTTSAFISFFKSYQNITPKKY 269 >UniRef50_C0YJ90 AraC family transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YJ90_9FLAO Length = 270 Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 68/252 (26%), Positives = 118/252 (46%), Gaps = 13/252 (5%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 PD + F +H +++L P H+H KGQL G T++N ++VP ++ WIP Sbjct: 8 PDIDKDDKSVFVMHEKSEKLI-PFHKHTKGQLSYVEGGIAYITIDNKTYVVPARHFFWIP 66 Query: 72 GGVEHSNQV--TANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129 G+EH ++ TA F ++ P L I P EL++ + T + Sbjct: 67 QGMEHILEIGHTATVLRSLYFYAHDDISDP-FYSRLGIYP-ASELLIQMIKYTEIWDEKH 124 Query: 130 MTRR-----LIQVLFDELPQQPQQQL--HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182 +T + + L LP+ QQ L LP + H ++ +V + E L + Sbjct: 125 VTAKDENFEFLVALKKILPKTHQQPLPIILPATHHKQMMKIVSYLEWNIGERLTLAHVSS 184 Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDT-VQKVAHTLGYDSTTAFI 241 F +SER+L+RL + +SF Q+ + L+++ A++ L+ D + ++A +GY S +AF Sbjct: 185 KFGLSERSLSRLFKADMDISFLQYLKTLRIVKAIELLLNTDKPINEIADDVGYSSISAFS 244 Query: 242 TMFKKGLGQTPG 253 F + P Sbjct: 245 DTFHEFTQSRPS 256 >UniRef50_D1UHS6 Transcriptional regulator, AraC family n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UHS6_9BURK Length = 276 Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 2/225 (0%) Query: 34 PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI-- 91 P H H+ Q++ A+ GA+T + ++ P+ AVW+P G+ H +E L+I Sbjct: 31 PEHSHQWHQMVYAISGALTVISDGGSIVISPEQAVWLPTGLRHRVGSLLGSEFRSLWIAD 90 Query: 92 EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151 E + + +SPL R LI+ + R+ Q++ D+L + Sbjct: 91 ETGSTLAGVSPMVFAVSPLLRALIVEATAIAGQPDDDGYVGRITQLILDQLRRARPLPTA 150 Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211 LP + + E + P + +WA MS R LAR V ETG+S R WR++L+ Sbjct: 151 LPWPRDDTLAQLCEKLHADPADPRGPEEWAQRLGMSARTLARRFVAETGMSLRSWRRRLR 210 Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 L A++ L G V + A LGY ST+AFI F+ LG +P ++ Sbjct: 211 LFRAIELLGGGMDVTRTALELGYSSTSAFIYAFRLELGSSPQAFM 255 >UniRef50_C7R5F1 Transcriptional regulator, AraC family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R5F1_JONDD Length = 267 Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 7/213 (3%) Query: 48 HGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS----AVTMPTTCC 103 HG + + ++V +W+P V H+ + + +A L F+ P+ ++ TT Sbjct: 52 HGTLRVDIAGRTYLVTHTRLLWVPANVTHTLRPSHDA-LLIPFMMPTDPDTTISTWTTVH 110 Query: 104 TLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTM 163 T++ + LI LA + E R + L D LP+ + + + + P+ T+ Sbjct: 111 TIRATGALHSLIRVLAQPALSTAHE--YSRALDQLLDVLPRLKELDIDVALPCDPRAATV 168 Query: 164 VEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD 223 + + P +L +WA S + L RL V++TG++F +WR ++++ AL L +G Sbjct: 169 ATALIENPAHPRSLEEWAKVCYTSAKTLQRLFVQQTGVTFPEWRTRVRVRTALDLLHEGW 228 Query: 224 TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 TV VA +GY + + FI F + G TP RY+ Sbjct: 229 TVHSVATRVGYSTASGFIAAFSRITGHTPARYM 261 >UniRef50_D1XRU9 Transcriptional regulator, AraC family n=4 Tax=Actinomycetales RepID=D1XRU9_9ACTO Length = 272 Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 3/221 (1%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H+HR+ Q + G + W VPP+ AV IP H ++ + L+IEP A Sbjct: 32 HRHRRAQFLYGATGVMVVDTAEGTWTVPPERAVLIPAATRHRVRMLGVSTRS-LYIEPGA 90 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 V P TC +++ PL REL+L + ++++L E+ ++ H+ + Sbjct: 91 VPWWPGTCTVVEVPPLLRELLLVAVDLPLDYSLAGREGSIVELLLHEIAERAPLPFHVAI 150 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 + + P WA AMSER R ETG S WR + +L+ Sbjct: 151 PVSADLAGLCRAYLAAPDAGVTNAAWAARTAMSERAFTRRFRAETGDSPAVWRSRARLLA 210 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 A+ L++ +V +VA LGY S AF F + G P R+ Sbjct: 211 AVP-LLRTASVSEVAGRLGYASPAAFTAAFTRAFGLPPSRF 250 >UniRef50_A5VF29 Transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria RepID=A5VF29_SPHWW Length = 274 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 73/234 (31%), Positives = 107/234 (45%), Gaps = 18/234 (7%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H QLI A+ G I + A ++P A WIP G H V + + L+ P A Sbjct: 40 HDHPYHQLIYAVAGTIQIETDAARHLLPTGRAAWIPAGQRHRTLVH-DVDTASLYFAPDA 98 Query: 96 VTMPTTCCTLKI-SPLCRELIL-------TLANRTTTQRAEPMTRRLI--QVLFDELPQQ 145 V + + SP+ RE+IL +A R R+ T L+ + L ELP Sbjct: 99 VADGGGRVRILVASPVMREMILHALRWPQAVAERDPVARSFFGTLALMCGEWLESELP-- 156 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 L LP + HP I +++ A P L AMSER+ R +ETG+ ++ Sbjct: 157 ----LSLPGARHPGIVRAMDLAAVDPAGID-LPAALAAAAMSERSFRRAFSRETGMGWQA 211 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 W QL+++ A+ L G V VA +GY S +AF F + G+ P Y +R+ Sbjct: 212 WVAQLRILRAMGMLADGGRVTDVAAEVGYASLSAFAKAFAQLAGEGPADYRSRV 265 >UniRef50_Q7NRR7 Probable transcriptional regulator n=1 Tax=Chromobacterium violaceum RepID=Q7NRR7_CHRVO Length = 250 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/233 (30%), Positives = 102/233 (43%), Gaps = 12/233 (5%) Query: 27 GTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL 86 G + H H GQLI GA+ C E W++ WIP GV HS + A EL Sbjct: 15 GVSRCGTASHVHAVGQLIYLRRGAMLCQSETMRWLMAAGQVGWIPAGVAHSAEPLA--EL 72 Query: 87 CFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEP---MTRRLIQVLFDELP 143 + + P +++ P L+ L R AEP +RL + DEL Sbjct: 73 YGVTAYADSAAYPDLPAEVRVMP-AGGLMGLLLERQLRYEAEPWPGRRQRLAGAIVDELL 131 Query: 144 QQ---PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETG 200 Q PQQ LP+ + ++R + + L + A S +L R +ETG Sbjct: 132 QLVPLPQQ---LPLPAERRLRALCRRVLADLGRGWLLDELAVAHGFSRASLTRAFARETG 188 Query: 201 LSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253 +SF W Q +L+ A++ L G V + A +GY S +AF F++ LG PG Sbjct: 189 VSFGHWLAQARLLEAVRLLSGGAMVGETALQVGYQSPSAFCAAFRRHLGMAPG 241 >UniRef50_UPI000050FCF9 AraC family transcriptional regulator n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FCF9 Length = 272 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 10/223 (4%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC---FLFIE 92 H H +L+ G T T++ W + P +WIP GV HS A + F Sbjct: 52 HSHPTHELLWREAGVGTVTIDQRTWTITPPLGMWIPAGVRHSGWTPAGVVVYAAQFSLDN 111 Query: 93 PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152 P PT + I+PL R L+ L + + +T +I + P + LH+ Sbjct: 112 PLVSDRPTA---IAITPLLRLLLDRLQHTDPGTSSYSLTEAMILDVM--TPADNELLLHM 166 Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212 P S+P I + + +GP + +L WA +S R + R ETGL F +W ++ Sbjct: 167 P--SNPLIAPIANAIIEGPADASSLQDWARKLGISGRTITRAFEAETGLGFGRWATTARV 224 Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 A+ + G V + A +GY S +AF T FK+ G TPG++ Sbjct: 225 QHAVSMISLGGEVDEAAAGVGYRSVSAFTTAFKRITGTTPGQF 267 >UniRef50_A8L421 Transcriptional regulator, AraC family n=12 Tax=Actinomycetales RepID=A8L421_FRASN Length = 290 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 70/249 (28%), Positives = 115/249 (46%), Gaps = 14/249 (5%) Query: 29 DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88 + L + H H Q+ A+ G + A +++PPQ A WIP G+EH + Sbjct: 38 ERLVTGWHSHDLHQIEYAVAGVVEVETATAHYLLPPQQAAWIPAGLEHQATMNTAVRTVS 97 Query: 89 LFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAE--PMTRRLIQVLFDELPQQ 145 + +P V P L ++PL RE+++ A R RAE P+ Q L + + Sbjct: 98 VMFDPRLVPHPGDRARILAVAPLIREMMI-YALRWPIARAEHDPVADGFFQTLGHLVSEA 156 Query: 146 PQQQ--LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203 + L LP S+ P I + + ++ +G+ + +SER L R GLS+ Sbjct: 157 LDHEAPLSLPTSTDP-IVSAAMAYTQNHLDSVTVGEVSRAVGVSERTLRRQFRSTLGLSW 215 Query: 204 RQWRQQLQLIMALQGL-VKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262 R + Q +L+ A+ V G +V +V+ +G+D+ +AF F + G+TP Y R+ Sbjct: 216 RSYLLQARLLRAMALFAVPGQSVLEVSTAVGFDNGSAFARAFSQYCGETPSSYQRRI--- 272 Query: 263 SPQSAKPDP 271 SA P P Sbjct: 273 ---SAAPQP 278 >UniRef50_C0YKZ5 AraC family transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YKZ5_9FLAO Length = 260 Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 5/229 (2%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWI-PGGVEHSNQVTANAELCFLFIEPS 94 H H+KGQL+ G T+E ++++P +AVWI P V +N + +L +F + S Sbjct: 31 HHHQKGQLVYVESGFQYITIEEKIYLLPQNHAVWIPPNAVHKTNSHSEKIKLMIMFADIS 90 Query: 95 AVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ--LH 151 + P+ +E+I + ++ ++ LF+ELPQ + LH Sbjct: 91 TDNPFYHEISVFSVPPVLKEMIKYSEKWSKLMISDYNETLFLKTLFNELPQFVKHSLTLH 150 Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211 + + ++ ++E + + + + +S R L R+ KETGL+ +++Q L+ Sbjct: 151 ICLPKDKRLTKVIEHLHSHYLNEIKMEDLSDAAFLSFRTLERIFKKETGLTLSKYQQMLR 210 Query: 212 LIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 +I +L+ L G T+ + A+ +GY S AF F+ + P +I + Sbjct: 211 IIKSLELLSSGTLTISETAYEVGYKSVQAFTRSFQAVMQFRPTDFIKTI 259 >UniRef50_D1VDY4 Transcriptional regulator, AraC family n=1 Tax=Frankia sp. EuI1c RepID=D1VDY4_9ACTO Length = 322 Score = 86.7 bits (213), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 14/254 (5%) Query: 29 DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88 + L +P H H Q+ A+ G + +++PPQ A W+P G+ H + Sbjct: 69 ERLVTPWHSHDLHQIEYAMSGVVEVETAGGRYLLPPQQAAWLPAGLSHQATMNTAVRTVS 128 Query: 89 LFIEPSAVTMPTTCCTL-KISPLCRELIL-----TLANRTTTQRAEPMTRRLIQVLFDEL 142 + +P V P + +SPL RE+IL +A + ++ R L ++ + + Sbjct: 129 VMFDPRIVPRPGDRARIVAVSPLIREMILYALRWPIARTESDDVSDGFFRTLAHLVAEAI 188 Query: 143 PQQPQQQLHLPVSSHPKIRTMVEMMAK--GPVEWGALGQWAGFFAMSERNLARLIVKETG 200 + L LP S+ P + + + G V + + G +SER L R E G Sbjct: 189 DH--EAPLSLPTSADPLVAAAMAHTRENLGTVTAATVSRAIG---VSERTLRRQFAAELG 243 Query: 201 LSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 +S+R + Q +L+ A+ L + G +V V+ +G+++ +AF F +G+TP Y R+ Sbjct: 244 MSWRAYLLQARLLRAMALLAEPGPSVLDVSLAVGFENVSAFARAFALRVGETPSAYRRRV 303 Query: 260 TTVSPQSAKPDPRQ 273 P PR+ Sbjct: 304 AADPKPIGGPAPRE 317 >UniRef50_B5H317 AraC-type DNA-binding domain-containing protein n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5H317_STRCL Length = 253 Score = 86.3 bits (212), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 67/248 (27%), Positives = 103/248 (41%), Gaps = 28/248 (11%) Query: 34 PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTA----------- 82 P +H + L G + W++PP A+WIP GV H+ V Sbjct: 8 PTRRHPRHLLARVPGGLLAVRTGAGAWLLPPSTALWIPAGVPHATAVLTTPAAPSAPAAP 67 Query: 83 -----------NAELCFLFIEPSAVTMPTTC---CTLKISPLCRELILTLANRTTTQRAE 128 + + L +P T P T +++ PL LI L T A Sbjct: 68 PAPTAVAAARISGPVVDLAADPLTTTGPGTWRDPTAVRVEPLLSALIDHLGRPGLTPDAR 127 Query: 129 PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSE 188 RR +V+ D L P + P+ R + +A P + L W S Sbjct: 128 ---RRAEEVVLDVLVPLPVISVAAAEPQDPRARAVARALAGDPRDNRGLPAWGSQVGASA 184 Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGL 248 R LARL + ETGL+F QWR++L++ A+ L ++ VA +GY S ++F+ F + + Sbjct: 185 RTLARLFIAETGLTFGQWRERLRMQAAMPLLASELPIEAVARRVGYGSASSFVAAFHRIV 244 Query: 249 GQTPGRYI 256 G TP +Y Sbjct: 245 GLTPRQYF 252 >UniRef50_C6C927 Transcriptional regulator, AraC family n=2 Tax=Dickeya dadantii RepID=C6C927_DICDC Length = 271 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 8/226 (3%) Query: 33 SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92 +P H+H +GQ +L G + + W++ A+WIP H + EL ++ Sbjct: 26 NPPHRHPQGQFVLVRQGLLQGFSSQSSWLLKAGMAIWIPPETVHWGETAHQVELLVVYAT 85 Query: 93 PSAVTMPTTCCTLKI-SPLCRELILTLANRTTT-QRAEPMTRR--LIQVLFDELPQQPQQ 148 P T C LK+ + C LI+ L R A P TRR L+Q+LF+E+ P Sbjct: 86 PEQCQAIT--CPLKLMNASC--LIIGLCERLAAPNSALPDTRRERLLQLLFEEIADSPSS 141 Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208 L LP+ P+++ + + + P L W + R L+RL +++TGLSF W Sbjct: 142 PLSLPLPDDPRLKKITDALIATPSLRHNLDSWGKHAGATARTLSRLFMRQTGLSFGAWHD 201 Query: 209 QLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 +L L A + L G +A LG+ AF FK+ G TPG+ Sbjct: 202 RLLLSEAWRQLHAGYNNDALALHLGFSCGDAFGHWFKRIAGLTPGQ 247 >UniRef50_B9T9R1 Putative uncharacterized protein n=4 Tax=Ricinus communis RepID=B9T9R1_RICCO Length = 915 Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 1/139 (0%) Query: 85 ELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELP 143 EL L+IEP A ++P CC L+ S L +++ L ++ RL V DEL Sbjct: 313 ELRSLYIEPVFAESLPDHCCVLQPSRLLIDIVERLLEYPVNYSSDSPQARLAGVAADELK 372 Query: 144 QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203 P+ L +P + PK+ + E P + L QW SER LARL + TG++F Sbjct: 373 VAPRTPLQVPKPTSPKLVAIAEHTINHPADNQTLAQWGNKLGASERTLARLFRQNTGMTF 432 Query: 204 RQWRQQLQLIMALQGLVKG 222 QWRQQ++L +ALQ L + Sbjct: 433 PQWRQQIRLSLALQMLAEA 451 >UniRef50_D1BHB2 Transcriptional regulator, AraC family n=10 Tax=Actinomycetales RepID=D1BHB2_SANKS Length = 279 Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/229 (28%), Positives = 97/229 (42%), Gaps = 16/229 (6%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTAN-----AELCFLF 90 H H +L+ GA T TV W V P +W+P GV HS A A+L Sbjct: 61 HSHPTHELLWNERGASTATVGPRTWTVTPSIGLWVPAGVRHSGWTPAGTWQRAAQLNTRT 120 Query: 91 IEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRR-LIQVLFDELPQQPQQQ 149 + S P + L + + + + E M L+ + L Q P + Sbjct: 121 VR-SISETPVAVDLTPLLTLLLDRLDSDLGEASRATTEAMVLDVLVPAPTELLLQSPTSE 179 Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209 L PV VE + P + L WA +S R + R + ETGL F QW Sbjct: 180 LLAPV---------VETVLADPADPTTLAAWAARLGVSTRTVTRTFLAETGLGFSQWVAT 230 Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 + A+ L +G+ ++ VA +GY S +AF T F++ G +PGR+ AR Sbjct: 231 ARTQHAIALLARGEEIEDVALLVGYGSASAFGTAFRRVTGVSPGRFRAR 279 >UniRef50_C9PG34 Transcriptional regulator AraC family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PG34_VIBFU Length = 245 Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 4/223 (1%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H + QL G + E W V W P G H +V + E L+++ + Sbjct: 20 HTHLESQLFWVNRGILMVEAEQQRWTVASGCLAWNPAGCRHRTEVITDVEGELLYVQDAT 79 Query: 96 V--TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153 + MP ++ L LI L+ T ++ + + +L E+ P L LP Sbjct: 80 MLDAMPAPKL-IRCDDLTSALIKRLSG-TEYNASDTCEQAWLALLGSEISHAPATPLQLP 137 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 + + R + + P + A F +S R L RL ++TG++F WRQQ +L+ Sbjct: 138 LPEDKRARKVANYLIAEPENRLSQETLAERFGLSSRTLHRLFRQQTGMTFVHWRQQSRLL 197 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 +L L G ++ +VA GYD+T ++I +F++ G TP Y+ Sbjct: 198 HSLSLLEAGKSITEVALASGYDNTGSYIQLFRQRFGVTPKLYL 240 >UniRef50_A5EPW3 Transcriptional regulator, AraC family n=3 Tax=Bradyrhizobium RepID=A5EPW3_BRASB Length = 268 Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 11/228 (4%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H HR+ QLI A G + T W+VPP AVW+P H+ + A++++ L+ E Sbjct: 38 HMHRESQLIYASRGTMQVTTPQGRWLVPPDRAVWVPARHAHAIDMLADSQMRTLYFELDW 97 Query: 96 VTMPTTCCTL------KISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ 149 + L ++SPL + IL L L+++ EL + Sbjct: 98 LRQAARGLRLDREFVVQVSPLLHQAILAL---FAPDGGAERAALLVRLALLELRRAEDSS 154 Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209 +P+ P+ R ++ P L A S R L+RL ET LSF+ W Q+ Sbjct: 155 TFIPLPQDPRARRAALLVLASPATEEDLATLASMVGSSARTLSRLFAAETRLSFKAWCQR 214 Query: 210 LQLIMALQGLVKGD--TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 ++ A++ L +V+++A LGY S AF F++ G+TP + Sbjct: 215 ARIAAAIERLSTDRHLSVKQLAADLGYASVPAFSHAFRQVTGRTPTDF 262 >UniRef50_Q2S7S2 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7S2_HAHCH Length = 250 Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 2/237 (0%) Query: 24 IHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTAN 83 + G D+ + +H +GQL GAI C + W+ P+ WIP G +H + + Sbjct: 12 LDIGADQ-SRDLHARSEGQLYWLEQGAIFCRSDRFHWLTAPRQLTWIPPGCQHDARPLST 70 Query: 84 AELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDEL 142 L + E +P L+ L +L L L+QV E Sbjct: 71 VRGVLLHLREDLTFVLPKEPVALEPHRLLEATLLRLIELCPESDWLERHEHLLQVFLWEA 130 Query: 143 PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202 + + LP+ P++ M + + P L A + S R L R ++ETG S Sbjct: 131 REATPLRQRLPMPHDPRLLRMANSLWRAPESNPGLDALALEYGFSRRTLTRKFMQETGAS 190 Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 QW Q +L+ AL+ L ++V A +GY S + F +FK+ G +PG Y R Sbjct: 191 LSQWTQHAKLLRALELLAANESVSSAAFGVGYQSVSTFCAVFKQVFGMSPGDYKRRF 247 >UniRef50_A5FK83 Transcriptional regulator, AraC family n=3 Tax=Bacteroidetes RepID=A5FK83_FLAJ1 Length = 273 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 65/248 (26%), Positives = 110/248 (44%), Gaps = 20/248 (8%) Query: 22 FCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT 81 +C H EL P H+H K QL+ A + T E + +P ++ +WIP GVEHS + Sbjct: 24 YCHHDLMGELFIPPHRHVKAQLLYAEGDVVFVTTETKTYFLPARHFIWIPSGVEHSIEPK 83 Query: 82 ANA---ELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQR---------AEP 129 + + + +E ++ L +++L NR A+ Sbjct: 84 SESVTMRNLYFPVEKDENDFYKVEGIYPVNNLLLQMML-FTNRWNGDLKKGTPNFAIAKA 142 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 + L Q+ + LP L LP ++ ++ + E A F SER Sbjct: 143 IKAILPQICTNNLP------LELPQPKDKRLSKILRYIENNLGETILFADVAHEFGFSER 196 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGL 248 +L RL K+ G+SF Q+ +++ A++ L++ +V++VA +GY+S F F K L Sbjct: 197 SLYRLFQKDLGMSFIQYYTIRRILKAIELLLERKLSVKEVAEEVGYNSVPTFSNTFFKIL 256 Query: 249 GQTPGRYI 256 GQ P Y+ Sbjct: 257 GQRPSDYL 264 >UniRef50_C3JVD6 Transcriptional regulator, AraC family n=3 Tax=Rhodococcus RepID=C3JVD6_RHOER Length = 277 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 72/257 (28%), Positives = 120/257 (46%), Gaps = 14/257 (5%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDE-LTSPVHQHRKGQLILALHGAITCTVENALW 60 + L ++ +E D E V + + D+ +T H HR +++ G + +W Sbjct: 20 IDELVVSEHELDDEPEDLVLWGGASSADQPVTWETHAHRSNEILFPRSGIVVVRSGAQMW 79 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAEL----CFLFIEPSAVTMPTTCCTLKISPLCRELIL 116 + P +WIP HS +V A A+ C + PS P + +PL EL+L Sbjct: 80 TLLPGRGLWIPALHRHSVRVAAGAQFLTVYCAVGQGPSLGDHP---VAVHGTPLLYELLL 136 Query: 117 TLANRTTTQRAEPMTRRLIQVLFD-ELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWG 175 L+ R + A RR +V FD +P + + +P S P R ++++ P + Sbjct: 137 HLSAREMSDDAR---RRAERVFFDLVVPGDERGAMKIP-DSGPVGRIARDLLSH-PEDPR 191 Query: 176 ALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYD 235 + G WA +S LAR +TG+SF QWR L++ +A+ L + V VA +GY Sbjct: 192 SFGDWANEIGVSTSTLARRFKVDTGVSFGQWRVLLRMNVAMSLLGQDVAVADVAEQVGYS 251 Query: 236 STTAFITMFKKGLGQTP 252 + ++F+ FK+ G TP Sbjct: 252 TPSSFVAAFKQSTGVTP 268 >UniRef50_Q3HKF1 Transcriptional regulator, AraC family n=2 Tax=Rhodobacteraceae RepID=Q3HKF1_RHOS4 Length = 254 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 6/260 (2%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 M R + G+ D + V I + T H H +GQL +T L + Sbjct: 1 MQRDEIGGFAED---GSPVIGRITSFTPGTMPEAHAHWRGQLAWCPDRPVTVETGGRLHL 57 Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANR 121 + P A+W+P H + + L+ P+A +P + L EL+ TLA Sbjct: 58 LSPGMAIWLPPTHRHRIRAEGARKSVSLYTRPAAAPLPKAPTPFPLEALEAELLRTLAGS 117 Query: 122 TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWA 181 + R EP RL VL+D L + + P++R + G +L WA Sbjct: 118 SRADRQEPAFARLTAVLWDRLARPAPAPTLPLPTD-PRLRRIALAHLDGADH--SLDHWA 174 Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241 A+S R+L RL ++TG S+ W + L+L A+ L+ G +VQ AH GY + + F+ Sbjct: 175 AALALSRRSLQRLARRDTGQSWTTWMRDLRLARAIAPLMAGKSVQHAAHAAGYATASGFV 234 Query: 242 TMFKKGLGQTPGRYIARLTT 261 F+ G TPG+ R+ + Sbjct: 235 AAFQAAHGITPGQLQRRIES 254 >UniRef50_C8QDM1 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QDM1_9ENTR Length = 150 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 1/125 (0%) Query: 134 LIQVLFDELPQQ-PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192 ++ +LF+EL Q P LP + P++R + M+ P L + + R +A Sbjct: 23 ILPLLFNELSQATPAMVGCLPRVTEPRLRALTGMLLAQPDNNATLETLSQQLGTTSRTIA 82 Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252 RL + TG++F QWRQQL ++ ++ L +G +V+++A GY + +A ITMF K LG TP Sbjct: 83 RLFRQHTGMTFAQWRQQLTIMASIHQLSQGVSVEEIALRQGYCNGSALITMFSKVLGMTP 142 Query: 253 GRYIA 257 RY A Sbjct: 143 QRYFA 147 >UniRef50_D0LZ72 Transcriptional regulator, AraC family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ72_HALO1 Length = 284 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 28/251 (11%) Query: 33 SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92 +P H+HR+ Q++ AL G++ V A W++PPQ A +IP G EH + +A L ++++ Sbjct: 37 TPWHRHRRHQILYALTGSLKLEVTEAQWLLPPQRAAFIPAGCEHRVRCQRSAALRTVYLD 96 Query: 93 PSAV-------------TMPTTCCTLKISPLCRELILTLAN----RTTTQRAEPMTRRLI 135 + + C ++ L RE++L R+ RA + L Sbjct: 97 TATFAAGEDAAAPAPVPVIAAGTCVFSVTSLAREMLLYAMRWGPLRSADDRASEI---LA 153 Query: 136 QVLFDELPQQPQQ------QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 F L ++ L LP P + E A + ++ + A A+S R Sbjct: 154 DAFFSALALLSREWIRADAGLRLPRPRSPDLSRACE-HALADLAAASMARAAHAAAVSPR 212 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGL 248 LAR ET +S+R + + +++ A++ L + G V +VA ++G+D+ AF T F+ Sbjct: 213 TLARRFRDETQMSWRSFLRTARVLRAMELLAEPGARVTEVALSVGFDNPGAFSTSFRALT 272 Query: 249 GQTPGRYIARL 259 G++P Y R Sbjct: 273 GESPSSYQRRF 283 >UniRef50_A8LCQ9 Transcriptional regulator, AraC family n=1 Tax=Frankia sp. EAN1pec RepID=A8LCQ9_FRASN Length = 270 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 13/243 (5%) Query: 29 DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88 DEL S H+H ++ A+ G +++PP YA W+P GVEHS + N Sbjct: 22 DELISYWHRHDLHEVEYAVSGLAEIRTPTTHYLMPPSYAAWVPAGVEHS-PLLRNVTTIA 80 Query: 89 LFIEPSAVTMPTT-CCTLKISPLCRELILTLANRTTTQR------AEPMTRRLIQVLFDE 141 +F +P+ P + + + P+ RE+ + A R R A+ R L V+ + Sbjct: 81 VFFDPAVFDFPYSRAAVIPVPPVLREM-MRYATRWPIGRGEDDAEADTFFRALAAVVRGQ 139 Query: 142 LPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGL 201 L + L LP + P +R ++ E A + +SER L R G Sbjct: 140 LAH--EAPLSLPTADDPVVRDVMAYTTDHLAEVTA-ARVCRAVGISERVLRRRFAAVLGQ 196 Query: 202 SFRQWRQQLQLIMALQGLVKGDT-VQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260 S+R++ +Q++LI A+ L T V ++A +G+ S +A F+ G++P Y R Sbjct: 197 SWREYLRQVRLIRAMALLSTPTTSVGEIATEVGFGSASALARAFRAWTGESPSAYRDRWL 256 Query: 261 TVS 263 T + Sbjct: 257 TTA 259 >UniRef50_C4WPU9 AraC family transcriptional regulator n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WPU9_9RHIZ Length = 260 Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 1/211 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS- 94 H HR+GQL+ G +T E +M+P YAV + + H+ + E+ +++E + Sbjct: 45 HSHRRGQLLYGNTGYMTALTEEGAFMLPSGYAVLLRPDLPHAVETFGETEMYSVYVEENI 104 Query: 95 AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 + + LK+S L I LA R L ++ DE+ +Q L +P+ Sbjct: 105 SRDLWEETRVLKVSALLDASIQALAKEPLLYDENGRGRHLSALILDEIRCAGRQPLTVPL 164 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 + ++R + + P + WA MS R + R +ETG+SF +WRQ+L+ Sbjct: 165 PTEKQLRKLCRNLLGNPGLDLTIDDWAEEVGMSRRTMTRKFRQETGMSFIEWRQRLRASH 224 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245 ++ +G + + GY S + + K Sbjct: 225 VMRRQAEGVPLAMASVEAGYQSVSTLRKVMK 255 >UniRef50_A9IG40 Putative transcriptional regulator n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IG40_BORPD Length = 157 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 66/123 (53%) Query: 133 RLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192 R ++VL D L P +LP + P++ + + P L + AG MS R Sbjct: 29 RKVKVLLDSLQSLPDAPFNLPFPTEPRLLEVCLTIQSAPHLAHTLDESAGLARMSSRTFT 88 Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252 R ++ TGL + WRQ+++L+ +L+ L TV +VA T+GY + +AF FK+ G++P Sbjct: 89 RHFLRATGLPYHTWRQRMRLLGSLEMLRSDITVTEVALTIGYSTPSAFTHAFKQLFGKSP 148 Query: 253 GRY 255 R+ Sbjct: 149 SRF 151 >UniRef50_D0KLM1 Transcriptional regulator, AraC family n=2 Tax=Enterobacteriaceae RepID=D0KLM1_PECWW Length = 218 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 91/204 (44%), Gaps = 2/204 (0%) Query: 32 TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91 ++P H+H GQL G I A W V P W P + H V N L++ Sbjct: 13 STPWHKHSSGQLYWLREGIIVIETVLAQWTVTPGSVGWFPPDLNHRAWVPGNVIGNSLYL 72 Query: 92 EP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150 +P S+ P L L N + + +E + +L E+ Q + L Sbjct: 73 DPVSSNHFPYHAGIYGADHFIIAL-LERCNNSHIKHSEEYENLISNLLGYEIRQCSELPL 131 Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210 L + + + R + + K P Q A + +S RNL+RL ++TGLSF QWRQQ Sbjct: 132 ELKLPTDRRARNVASELLKNPGCILDQSQLAQKWGLSVRNLSRLFNQQTGLSFSQWRQQA 191 Query: 211 QLIMALQGLVKGDTVQKVAHTLGY 234 +++ +LQ ++ G V +VA GY Sbjct: 192 KVVASLQWVLLGLPVNEVASLSGY 215 >UniRef50_A9GKK5 Transcriptional regulator, AraC family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GKK5_SORC5 Length = 304 Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 74/281 (26%), Positives = 124/281 (44%), Gaps = 34/281 (12%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPV---HQHRKGQLILALHGAITCTVENA 58 + RL L+ H A AF DEL V H H + QL+ L G VE+A Sbjct: 41 LARLGLD-------HAGARAFSYE---DELRGAVYGWHTHARHQLLCPLAGTARLEVEDA 90 Query: 59 LWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTL-KISPLCRELILT 117 +++PPQ A IP G H+ +A + ++ EP+A P + +I L RE+++ Sbjct: 91 SFLLPPQLAALIPAGERHAT-TCGDASIVSIYFEPAAFPSPLAAVRIFEIPALLREMVIY 149 Query: 118 -----LANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPV 172 +A R A + ++ L + LP ++ +E + V Sbjct: 150 ARRWPVARRPDDAAANTFFAAMADIIGPLLDR--GATYRLPRGKTRPVQRAIECALRD-V 206 Query: 173 EWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKG--DTVQKVAH 230 L + A F +ER L R +ETG+++R + + +++ A+ L+ G +V +VA Sbjct: 207 ASADLPRAAAFAGATERTLRRRFREETGVTWRGFVTRARVLRAID-LLSGPSASVTQVAL 265 Query: 231 TLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSAKPDP 271 +G+ S AF F+ GQTP + ++A+P P Sbjct: 266 DVGFQSLGAFAAAFRAVTGQTPSEFR--------RTARPSP 298 >UniRef50_A6GAR4 Putative transcriptional regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GAR4_9DELT Length = 262 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 73/249 (29%), Positives = 107/249 (42%), Gaps = 27/249 (10%) Query: 19 AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78 A+ F I S H HR+ QL+ A+ G + + W++P A WIP G H Sbjct: 16 ALGFGIDETYRGFVSDWHSHRRHQLLHAVEGNLELEDSHGRWLLPEAQAAWIPAGQRH-R 74 Query: 79 QVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137 +A A L L++ PS V P ++ L L+ +R + R L Sbjct: 75 VSSAGARLQTLYLAPSLVAQPPAETAVFQLPALGHALLARALGWPHHRRLDRRARALFVC 134 Query: 138 LFDE------------LPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185 + +E LPQ Q L +R +V+ + GP L + A Sbjct: 135 VAEEFAAWSLEPGPWRLPQPRSQALAA------AMRHVVDNLEDGPT----LAEAARQAG 184 Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVK--GDTVQKVAHTLGYDSTTAFITM 243 +S R+L R ETG SFR++ ++I A Q L++ G V VA+ LGY S +AF T Sbjct: 185 VSARSLERRFRAETGSSFREFLLTARMIEA-QRLLREPGARVSSVAYRLGYSSPSAFSTA 243 Query: 244 FKKGLGQTP 252 F +GQ P Sbjct: 244 FLARVGQRP 252 >UniRef50_UPI000197B237 hypothetical protein BACCOPRO_02201 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197B237 Length = 274 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 56/241 (23%), Positives = 116/241 (48%), Gaps = 12/241 (4%) Query: 27 GTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH---SNQVTAN 83 G E+ P H H K Q+I L G + + + + VP ++ WIP G EH SN + Sbjct: 26 GWKEVNLPGHVHGKCQIIYTLAGTLHVEIGSESYFVPEKHIAWIPQGAEHKLSSNSRQVS 85 Query: 84 AELCFLFIEPSAVTMPT-TCCTLKISPLCRELILTLAN--RTTTQRAEPMTRRLIQVLFD 140 + ++ + P P + L E + +A+ + ++ +P F+ Sbjct: 86 MVIFYVSLRPEGKDDPKGEFAIYTANRLIGENLKFIASKGKMIEKQEQPDLYHFALGFFN 145 Query: 141 ELPQ-QPQQQL---HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196 LPQ P ++L L + ++ ++ + E + + A + +S RNL+RL Sbjct: 146 LLPQMSPGKELLLKSLVIPDDSRLYPILRYLTDHVQEELRMDEVALRYNLSTRNLSRLF- 204 Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 +E+ + F + +L+++ A++ + G T+Q++A+ +G++++ F +F++ GQ+P Y Sbjct: 205 QESNIHFSSYVNRLRIMRAIELMTDGGRTMQEIAYAVGFNNSNHFNRVFRQVTGQSPKNY 264 Query: 256 I 256 + Sbjct: 265 L 265 >UniRef50_Q1LNA3 Transcriptional regulator, AraC family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LNA3_RALME Length = 197 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 74/164 (45%) Query: 95 AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 ++ +P + S L ++ L + ++ RL++ L DEL P Q + LP Sbjct: 23 SLDLPGRPTAFRQSALSAAILERLPGSGVSSASDKRELRLLEALVDELGLLPPQPMCLPY 82 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 ++ + + +L A MS R+L R ETG+S +WR ++ Sbjct: 83 PKTSRLADIARKIIDDLAVANSLDDMAALAFMSRRSLTRQFRAETGMSIVEWRDAARMQR 142 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 A+Q L G +V +A+TLGYD + FI F G TP ++ R Sbjct: 143 AVQLLAAGHSVTSIAYTLGYDGASRFIDKFSATFGVTPKQFSLR 186 >UniRef50_B4R9V1 Transcriptional regulator, AraC family n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4R9V1_PHEZH Length = 198 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 7/161 (4%) Query: 98 MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLF-DELPQQPQQQLHLPVSS 156 +P+ + +S L + LI + + A P RR + +LF DE+ +P L +P + Sbjct: 40 LPSRPGVVPVSALLKALIGGIPD------AGPARRRRLALLFADEVHLEPAPALFIPELA 93 Query: 157 HPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMAL 216 + + + P + L WA +S R LAR + L+F +R+Q++L AL Sbjct: 94 GRLLGVLAAALRADPADERTLAAWAAELGVSSRTLAREFERRAQLTFTAYRRQVRLRAAL 153 Query: 217 QGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 + +G ++ +V LG+ S + FI F+ G TP RY A Sbjct: 154 IRMAEGQSITQVGLDLGFGSASNFIRAFRAATGVTPARYFA 194 >UniRef50_B5CUH6 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CUH6_9BACE Length = 268 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 20/245 (8%) Query: 27 GTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS-NQVTANAE 85 G +E+ P H H K Q+I L G + + + + VP ++ WIPG EH + Sbjct: 26 GWEEIKLPGHAHEKCQIIYTLSGTLHVQIGSTSYFVPEKHIAWIPGSTEHELSSKNRQVS 85 Query: 86 LCFLFIEPSAVTMPTTCCTLKI----SPLCRELILTLANRTTTQRAE-PMTRRLIQVLFD 140 L ++ A T I S + L + T ++A+ P F Sbjct: 86 LVIFYLSMDADDKDTALKEFSIYHTNSFIAENLKFIASKGTEIEQADSPDLYTFALSFFK 145 Query: 141 ELPQQPQ------QQLHLPVSS--HPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192 LP Q + L +P + HP + + E + E + Q A F S RNL+ Sbjct: 146 LLPSISQDMGFLLKMLAIPNDARLHPILAYLQEHLH----ENLKMPQLAAHFGFSVRNLS 201 Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQT 251 RL E+G+ F + L+++ A++ G T+Q++A+ +G+ + F +F++ G + Sbjct: 202 RLF-NESGIRFSYYVNNLRIMRAIELFADGGRTMQQIAYEVGFATPNHFNRVFRQITGVS 260 Query: 252 PGRYI 256 P ++ Sbjct: 261 PNAFV 265 >UniRef50_UPI00016AD7BA helix-turn-helix- domain containing protein, AraC type n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AD7BA Length = 183 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 65/124 (52%) Query: 133 RLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192 +L+ +L E+ + LH P+ P++ + P L A MS R + Sbjct: 54 KLMALLVAEMASMRRLSLHAPLPIDPRLARACRRLFDAPSIAIGLDAMAAEAGMSRRTMT 113 Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252 RL +TG SF +WR+Q+ L+ A++ L +G V +VA GY S +AF + F++ LG+ P Sbjct: 114 RLFRMQTGESFAEWREQVCLLAAIERLSEGQAVTRVALDRGYASPSAFPSAFRRVLGEAP 173 Query: 253 GRYI 256 R++ Sbjct: 174 TRHL 177 >UniRef50_Q28SV1 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28SV1_JANSC Length = 252 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/222 (22%), Positives = 100/222 (45%), Gaps = 8/222 (3%) Query: 40 KGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-M 98 + L+ A+ GA+ +V W++PP +A W+P S + C + P T + Sbjct: 27 RDYLLYAIRGALRVSVAGESWLLPPSFAAWLPANTPISVDIDKPVTTCSVLARPGLCTGL 86 Query: 99 PTTCCTLKISPLCRELILTLA----NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 P C ++SP+ R++I + +AE L+ V D + + P Sbjct: 87 PEKACVFQMSPMARQMIHYCKDWGPDAAHPAQAEGFFLALLHVCADLAVK--SVDVKRPT 144 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 ++ P +R +++ + + A +SER++ R + G+++ Q QL++I Sbjct: 145 ATDPVLRKAIDITEAHLAQAITANEIARKVNLSERSMQRHFQMDVGMTWSQTLTQLRMIH 204 Query: 215 ALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 A+ L +G ++ ++A G+ S +AF F+ TP ++ Sbjct: 205 AVALLAEGKLSIIQIAGYTGFQSLSAFNRAFRTFAATTPTKF 246 >UniRef50_A3XQJ9 Probable transcription regulator protein n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XQJ9_9FLAO Length = 261 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/247 (23%), Positives = 116/247 (46%), Gaps = 16/247 (6%) Query: 21 AFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV 80 + +H E P+H H+K Q+ G +N + P ++ +WIP G+EH+ Sbjct: 14 SIYVHHSKIEEQLPMHSHKKHQISYVEGGVAFLNTKNNSFFFPARHFIWIPAGLEHNVTS 73 Query: 81 TANAELCFLFIEPSAVTMPTTCCTLK--ISPLCRELILTLANRT---------TTQRAEP 129 + ++ P+ + +P T K I P+ L++ + N T T A Sbjct: 74 RTSVKMVHNLFFPADL-IPETEILKKAGIFPVSN-LLMEMINYTQRWNGDILRTDAEAFE 131 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 L ++ E+ + P + LP +++ +R +++ + + L + A F S R Sbjct: 132 FLIALRNIIL-EVAKTPFPVV-LPTTTNEMLRPILKYIHLNVDQPLYLEEVAAHFGYSAR 189 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGL 248 +L+RL K SF Q+ + ++I +++ L+K D ++ +VA+ GY+S +AF F + + Sbjct: 190 SLSRLFQKNIETSFLQYVKLTRIIKSIELLLKTDLSISEVAYASGYNSLSAFSYAFNQIV 249 Query: 249 GQTPGRY 255 Q+P + Sbjct: 250 NQSPAAF 256 >UniRef50_C5PU57 AraC family transcriptional regulator n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=C5PU57_9SPHI Length = 271 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 111/245 (45%), Gaps = 24/245 (9%) Query: 31 LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGG-----VEHSNQVTANAE 85 L + H H+ QLI +G + E +P +Y WIP G + S Q+ + Sbjct: 28 LNTSFHHHQLDQLISPENGVLYLHTEGDTLYIPDKYYAWIPSGTIYKLISKSEQI----K 83 Query: 86 LCFLFIEPSA----VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDE 141 L LF+EP + + L EL+ + +R + I + Sbjct: 84 LRTLFLEPEKNEFHADFFNSLAVYAPNTLIEELLQFGFSHWKKERDPELKEYCIAAIRHI 143 Query: 142 LPQQPQQ--QLHLPVSSHPKIR---TMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196 LP +L +P + ++ T ++ KGP++ L Q F +SER L+R Sbjct: 144 LPVALSTPLKLFVPAPASEVLQESITYIQNHIKGPLDIQHLAQK---FHLSERTLSRWFK 200 Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGD--TVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 KETG + Q+ + +++ AL+ L++ + ++ H +GY+S +AF T+FK+ +G++P Sbjct: 201 KETGSTLFQFVKSVRVQKALE-LIENSRMDIIEIMHAVGYNSLSAFSTVFKELIGESPQE 259 Query: 255 YIARL 259 Y R Sbjct: 260 YKKRF 264 >UniRef50_C7PA31 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PA31_CHIPD Length = 264 Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 61/263 (23%), Positives = 119/263 (45%), Gaps = 13/263 (4%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 MH L E D H ++ + +H + S +H H KGQL G C + + ++ Sbjct: 1 MHLLADYLNEIDVHPDSV--YVMHEKVERKFS-MHSHIKGQLTYVEGGIAFCNMPDKSYV 57 Query: 62 VPPQYAVWIPGGVEHSNQV--TANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLA 119 +P ++ +WIP EH Q+ + + L+ + L I P+ +L+L + Sbjct: 58 IPARHYIWIPKQQEHYMQIRHSKSTTTRNLYFYSQDDHLTPFYNKLGIYPV-NDLLLEMI 116 Query: 120 NRTTTQRAEPM----TRRLIQVLFDELPQQPQQQL--HLPVSSHPKIRTMVEMMAKGPVE 173 N + + R + + D LP L LP + H ++R +++ +A+ + Sbjct: 117 NYSARWERHVLPGDPGFRFLSSIKDILPDISTSALPVALPTTQHERLRPVLQYIAQSFDQ 176 Query: 174 WGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTL 232 L + F +S R L+RL +SF Q+ Q L+++ ++ +++ + T+ ++A+ Sbjct: 177 QLTLESVSSQFDLSPRTLSRLFTNILDMSFVQYLQTLRVVRGIEMILQTNQTLSEIAYQT 236 Query: 233 GYDSTTAFITMFKKGLGQTPGRY 255 GY S AF +F + + P + Sbjct: 237 GYSSIAAFSKVFYQLTNKRPSSF 259 >UniRef50_A5KTY3 Transcriptional regulator, araC family protein n=5 Tax=Vibrionales RepID=A5KTY3_9GAMM Length = 262 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 60/230 (26%), Positives = 99/230 (43%), Gaps = 31/230 (13%) Query: 32 TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91 +S VH H L+ G + + + P ++IP GV H +++ L + Sbjct: 41 SSEVHSHDYSHLVFIHQGCQIISTDKDSLLSMPGSLIYIPAGVPHRADALKQSQVSLLRL 100 Query: 92 EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDE---------- 141 ++ T C L ISP+ +L N Q+ EP IQVL D+ Sbjct: 101 PLGSIPELTEICILDISPIVTQLFSLWKNGGPEQKLEP---HYIQVLMDQCTRCKAVDNP 157 Query: 142 -LPQQPQQQLHLPV----SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196 + ++ + LPV S+ P I+ + ++K + GA S R L RL + Sbjct: 158 LIAKEGMDRRLLPVIDALSNKPSIKLSISDLSK---QTGA----------SVRTLNRLFL 204 Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKK 246 SFR+ RQ++ + A + + KG + ++A L Y S +AF T FK+ Sbjct: 205 TSFKASFREVRQKVVMERAEKMMAKGISATEIAFELEYSSLSAFSTAFKE 254 >UniRef50_B5GU05 HTH-type transcriptional repressor n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GU05_STRCL Length = 502 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/199 (27%), Positives = 84/199 (42%), Gaps = 20/199 (10%) Query: 68 VWIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELIL--TLAN---- 120 W+P GV +S + A L L P + T+P P + +L +AN Sbjct: 298 AWLPAGVRNSVTLPRGALLLPLGSRPGPSATLPGEVLVQSFPPQAEDGLLHTAVANYSFV 357 Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVS----SHPKIRTMVEMMAKGPVEWGA 176 R +TRR +++ LP + S + ++E + + P Sbjct: 358 RPEGHDPNGITRRFLEL---------SSAAALPTAADGPSASAVSRIIEELRRAPASPRT 408 Query: 177 LGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDS 236 L QWA A+ R L + TG ++ QWR QL++ +A Q L +G TV + A TLGY Sbjct: 409 LVQWATALAVDARALGHDFLDATGQTYPQWRAQLRMTLARQYLEEGMTVTRAARTLGYAD 468 Query: 237 TTAFITMFKKGLGQTPGRY 255 +A +F + G P Y Sbjct: 469 ASALSRVFTRAHGMPPSAY 487 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/200 (22%), Positives = 77/200 (38%), Gaps = 15/200 (7%) Query: 67 AVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCT-LKIS---PLCRELILTLANRT 122 +W+P G+ + V A + +F P+A + PT L++ LI A Sbjct: 22 GLWVPAGLPYEIDVEAGSVAVPIF--PAARSRPTAIDRPLRVDFPDSWSDWLIHQFARSL 79 Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLH-------LPVSSHPKIRTMVEMMAKGPVEWG 175 R L+ ++ D P P LPVS P+ T+ + + P Sbjct: 80 GHLRGAADDSGLLDLVADARPADPADGHRGPLPTPPLPVS--PEALTVARTLLQNPSHSA 137 Query: 176 ALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYD 235 + + A ++ R + ++ETGL F +WR ++ A L G + +G+ Sbjct: 138 GVDELARSVSVGVRTFQQQFLRETGLPFTRWRTAARVAAAASYLGLGHDIGWTGRQVGFA 197 Query: 236 STTAFITMFKKGLGQTPGRY 255 + F F+ G TP Y Sbjct: 198 TPAGFTKAFRAYTGVTPSTY 217 >UniRef50_B3JKA4 Putative uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JKA4_9BACE Length = 267 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 23/237 (9%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H K Q+I L G + + VP ++ WIP H ++++N+ L I Sbjct: 35 HAHEKFQIIYTLSGTLHVETGGVNYFVPEKHIAWIPEKASH--KLSSNSRQVSLIIFYIN 92 Query: 96 VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTR-------RLIQVLFDELPQQPQ- 147 + + + S I+ + + + +TR F+ LPQ Sbjct: 93 LNITPDDGKNRFSIYSTNGIIAENLKFIASKGKVITRGKQTDLYNFALSFFNLLPQMTLG 152 Query: 148 -----QQLHLPVSS--HPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETG 200 + L +P S HP + + E + E + Q A + +S RNL+RL +G Sbjct: 153 ADFLLKTLVIPNDSRLHPILNYITEHIH----EDLNMEQIASQYNLSVRNLSRLF-NTSG 207 Query: 201 LSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 + F + L++ A++ L GD TVQ+VA+ +G+++ F +FK+ G++P YI Sbjct: 208 IHFSNYVNHLRITRAIELLTDGDNTVQEVAYKVGFNTPNNFNRVFKQVTGKSPKTYI 264 >UniRef50_A6ED21 Transcriptional regulator, AraC family protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6ED21_9SPHI Length = 271 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 7/227 (3%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGV----EHSNQVTANAELCFLFI 91 H H+KGQL G I + +P ++ VW+P GV EH + T + F Sbjct: 34 HHHKKGQLTYVEGGVIFLYTREQSYFIPARHYVWVPAGVTHHLEHRYRSTIVRNVYFNAK 93 Query: 92 EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151 + ++ L E++ N ++ L LP + L Sbjct: 94 NEIDHSFFDHIGIYPVNDLLLEMLKFSENWNGNIYPGSFEYGFLETLKSILPAISKHPLP 153 Query: 152 L--PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209 + P + + ++R ++ + + E L + A SER L+RL SF Q+ + Sbjct: 154 IVVPTTDNERLRPVLWYIRQHLSEELTLEKIALETGFSERTLSRLFQASLKTSFFQYLKL 213 Query: 210 LQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 +++ A++ L++ D TV ++A+ +GYDS AF F K GQ P + Sbjct: 214 VRMTRAMEKLLETDRTVTEIAYEVGYDSIAAFSNTFYKMTGQRPSAF 260 >UniRef50_Q1QZK4 Transcriptional regulator, AraC family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZK4_CHRSD Length = 266 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 7/224 (3%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 +H H Q+ + T + + + +P A+ +P G +H+ +T+ I Sbjct: 35 LHSHGYHQIAMCEQPGATLLLGSQVVSIPWNGALLVPSGTDHA--LTSETRCVIRCIYFK 92 Query: 95 AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV-LFDELPQQPQQQLHLP 153 A T+ +L ++ L +ELI ++ T+R +RRL++ L+D++ Q Sbjct: 93 AALPSTSIGSLFLNRLTKELIKEISTSYVTER----SRRLMEACLYDQIGQLLWSSGSGM 148 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 + +R + + + P + + A +SER+L RL E G + Q R + ++ Sbjct: 149 MPPSRSLRVICKHIFDTPEDDTPVATLAKDAGLSERSLRRLARDELGCTISQIRTRCRIY 208 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 A Q L G V+ +A +GY S +AF + F++ +G +P R+ A Sbjct: 209 KATQLLQAGVPVKLIAADVGYQSNSAFFSAFREIMGMSPARFQA 252 >UniRef50_C2FVA1 AraC family transcriptional regulator n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FVA1_9SPHI Length = 263 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 63/246 (25%), Positives = 113/246 (45%), Gaps = 26/246 (10%) Query: 31 LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGG-----VEHSNQVTANAE 85 L + H H+ QLI +G + E +P +Y WIP G + S Q+ + Sbjct: 23 LNTTFHHHQLNQLISPANGVLYLHTEGDTLYIPDKYYAWIPSGMIYKLISKSEQI----K 78 Query: 86 LCFLFIEPSAVTMPTTCC-TLKI---SPLCRELILTLANRTTTQRAEPMTRRLIQVLFDE 141 L LF++P + + TL + + L EL+ + + + L Sbjct: 79 LTTLFLKPEKNEIQSDFFNTLGVYAPNTLIEELLQFGFRHWQETKHAGLKESCMAALKRI 138 Query: 142 LPQQPQQQLHLPVSSHPKIRTMVEMMA------KGPVEWGALGQWAGFFAMSERNLARLI 195 LP L L V + P+ ++E++ P ++ L Q F +SER L+R Sbjct: 139 LPVVLSTPLKLFVPA-PESEVLMEIITYIQKHLNSPSDFQQLAQR---FNLSERTLSRWF 194 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQ--KVAHTLGYDSTTAFITMFKKGLGQTPG 253 KETG + Q+ + +++ AL+ L++ ++ ++ H +GY+S +AF T+FK+ +G++P Sbjct: 195 KKETGSTIFQFVKSVRVQKALE-LIESSNMEIVEITHAVGYNSLSAFSTVFKEFMGESPQ 253 Query: 254 RYIARL 259 Y R Sbjct: 254 EYKKRF 259 >UniRef50_C3JMH4 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus erythropolis RepID=C3JMH4_RHOER Length = 538 Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 21/231 (9%) Query: 39 RKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS--AV 96 R L L G+ + ++ VP +WIP GV +S + +++ + + PS Sbjct: 27 RSPLLFWVLAGSGRVRTGSTVYEVPAGELLWIPAGVRYSMETDSDSVAFPILLPPSNGVS 86 Query: 97 TMPTTCCTLKISP-----LCRELILTLANRTTTQRAEPMTRRLIQVLFDE----LPQQPQ 147 P T L++ P L E + L A P + + D+ LPQ PQ Sbjct: 87 AGPATVTRLRVPPGWEDRLIHEFVHNLGY-LRGDAAHPSSLFEMITRADDGATSLPQLPQ 145 Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207 + ++ H +RT P Q+A +S R L R V+ETGL+F +WR Sbjct: 146 SREAFEIA-HALLRT--------PGTDDTEAQFAKRAGISIRTLQRYFVEETGLTFTRWR 196 Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 + ++ +L+ L + + +A+ +G+++ + F F+ +G++P Y R Sbjct: 197 LRARIAASLEYLKQDREIGWIANEVGFETGSGFTRAFRAQMGESPSDYRRR 247 Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust. Identities = 41/142 (28%), Positives = 59/142 (41%), Gaps = 9/142 (6%) Query: 139 FDELPQQPQQQLHLPVSSHPKIRT-MVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197 FD + P Q S I T + +A P + L +WA F L R Sbjct: 393 FDIIATGPLAQPVSNTSPADSIATRLAATIAARPADPRTLDEWAQEFGTDAARLRREFRI 452 Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 ETG ++ QWR ++ A L G V+ LGY AF F+ G +P R+ A Sbjct: 453 ETGTTYPQWRSLSRMTQARTQLQLGVAPGTVSRNLGYAHLPAFSRAFRTAHGISPQRFQA 512 Query: 258 R-------LTTVSPQSAKPDPR 272 + L +V P++A+P R Sbjct: 513 QSVERALWLRSV-PRAAEPSAR 533 >UniRef50_A0KFD0 Transcriptional regulator, AraC family n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KFD0_AERHH Length = 230 Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%) Query: 49 GAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKIS 108 G + + + +V Q + IP G+ H +V ++ L ++++ + + T ++S Sbjct: 31 GGVISSQAAGVLLVAGQLCL-IPAGLAHEFRVLRHSRLSLIYLDD--LDGGSELTTRQVS 87 Query: 109 PLCRELILTLANRTTTQRAEPMTRR-LIQVLFDELPQQP-QQQLHLPVSSHPKIRTMVEM 166 PL L LA+ AEP R + VL EL Q P L + ++ ++E Sbjct: 88 PLLAGLFERLADM-----AEPGLRDAYLTVLAAELRQAPVAAGFMLSAALDVRLLRVLER 142 Query: 167 MAKGP-VEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTV 225 + + P +E+G L + A S R L RL ++ G SFRQWRQQ+ + A Q +G + Sbjct: 143 VCRHPSIEYG-LAELAADSGASVRTLNRLFSQQLGCSFRQWRQQVVMGRARQLQQQGQPL 201 Query: 226 QKVAHTLGYDSTTAFITMFKKGLGQTPG 253 ++A LGY +AF F + L + G Sbjct: 202 SRIALELGYGDFSAFSHAFNRFLREPAG 229 >UniRef50_A6B1F0 Transcriptional regulator, AraC/XylS family (Fragment) n=2 Tax=Vibrio parahaemolyticus RepID=A6B1F0_VIBPA Length = 154 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 1/112 (0%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 +H H GQ+ L G + E+ ++ PP A+W+P G+ H++ E C L I+P Sbjct: 36 IHSHPWGQVQLISGGILEMDAEDTRFLAPPHLAIWVPAGIRHTSYNRKPIEYCSLNIDPE 95 Query: 95 AVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 PT +K++P+ +I R +RL++VL D+L +Q Sbjct: 96 LTAHFPTKTSLIKVTPIVSAIIEDFRQRDINVAQSDEDKRLVRVLLDQLAKQ 147 >UniRef50_C7PGY2 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PGY2_CHIPD Length = 278 Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 57/253 (22%), Positives = 107/253 (42%), Gaps = 12/253 (4%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 P+ +A F IH ++ P+HQH K QL G + + L ++P ++ WIP Sbjct: 22 PEIEQQATSIFVIHEKCEK-QIPLHQHSKSQLFYVDGGIAYIRLADQLLVIPSRHYCWIP 80 Query: 72 GGVEHSNQVTANA-ELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQ---RA 127 G+ HS + N L + + I P+ LI + R T Q Sbjct: 81 AGIPHSLTIGQNGTHLRSILFTTKGENKHAFYNDVGIYPINDLLIEMM--RYTEQWQGHI 138 Query: 128 EPMTRR--LIQVLFDELPQQPQQQL--HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183 P R +Q + LP+ + L LP + + ++ ++ + + + L + Sbjct: 139 LPDDERFMFLQSIKSILPKISIRHLPIALPYTENKRMLQIISYIEENISDKHTLETISKR 198 Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGL-VKGDTVQKVAHTLGYDSTTAFIT 242 F +S+R L+R +SF Q+ + L+++ A + + K ++ ++A+ GY S +F Sbjct: 199 FGLSDRTLSRFFKDTLKISFLQYLKLLRMVKAFELIQQKAHSLSEIAYLTGYQSLASFSY 258 Query: 243 MFKKGLGQTPGRY 255 F + P + Sbjct: 259 TFYQVTNMRPSEF 271 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76241 Uncharacterized HTH-type transcriptional regulat... 365 1e-99 UniRef50_Q1ZT94 Putative transcriptional regulator n=3 Tax=Photo... 282 1e-74 UniRef50_C5AN13 Helix-turn-helix-domain containing protein AraC ... 278 2e-73 UniRef50_Q216D2 Transcriptional regulator, AraC family n=7 Tax=B... 276 7e-73 UniRef50_A4JQ17 Transcriptional regulator, AraC family n=56 Tax=... 274 3e-72 UniRef50_B5RKL9 Transcriptional regulator, AraC family n=2 Tax=c... 273 5e-72 UniRef50_Q0B1C2 Transcriptional regulator, AraC family n=5 Tax=P... 273 6e-72 UniRef50_D1RWK8 Transcriptional regulatory protein n=2 Tax=Gamma... 271 2e-71 UniRef50_C5CZV0 Transcriptional regulator, AraC family n=1 Tax=V... 270 3e-71 UniRef50_A8G9B2 Transcriptional regulator, AraC family n=4 Tax=c... 268 2e-70 UniRef50_B6JB31 Transcriptional regulator, AraC-family n=5 Tax=P... 267 3e-70 UniRef50_C3KCF4 Putative transcriptional regulator n=1 Tax=Pseud... 266 7e-70 UniRef50_D2M677 Transcriptional regulator, AraC family n=1 Tax=R... 263 7e-69 UniRef50_B8J3U2 Transcriptional regulator, AraC family n=2 Tax=P... 260 3e-68 UniRef50_Q4K9E0 Transcriptional regulator, AraC family n=1 Tax=P... 260 4e-68 UniRef50_Q2SP75 AraC-type DNA-binding domain-containing protein ... 259 5e-68 UniRef50_Q2F9R4 AraC-type DNA-binding domain-containing protein ... 257 3e-67 UniRef50_Q391T4 Transcriptional regulator, AraC family n=8 Tax=P... 255 1e-66 UniRef50_A5GBQ3 Transcriptional regulator, AraC family n=2 Tax=B... 254 2e-66 UniRef50_A9FA95 Transcriptional regulator, AraC family n=2 Tax=P... 253 4e-66 UniRef50_A8I0S5 Transcriptional regulator n=1 Tax=Azorhizobium c... 253 5e-66 UniRef50_B4SJK4 Transcriptional regulator, AraC family n=4 Tax=P... 252 6e-66 UniRef50_Q0BZS2 Transcriptional regulator, AraC family n=1 Tax=H... 252 7e-66 UniRef50_Q2BLH8 Transcriptional Regulator, AraC family protein n... 251 2e-65 UniRef50_Q14GY1 Transcriptional regulator araC family protein n=... 249 5e-65 UniRef50_D1RUP3 Transcriptional regulatory protein n=2 Tax=Enter... 249 7e-65 UniRef50_A0AX10 Transcriptional regulator, AraC family n=6 Tax=B... 249 8e-65 UniRef50_Q0B9P3 Transcriptional regulator, AraC family n=14 Tax=... 249 1e-64 UniRef50_B0UH11 Transcriptional regulator, AraC family n=3 Tax=R... 249 1e-64 UniRef50_Q11DK3 Transcriptional regulator, AraC family n=1 Tax=C... 248 1e-64 UniRef50_A6W3J4 Helix-turn-helix-domain containing protein AraC ... 248 1e-64 UniRef50_A6W2J3 Transcriptional regulator, AraC family n=1 Tax=M... 248 1e-64 UniRef50_A9HXG4 Transcriptional regulator, AraC family n=3 Tax=P... 248 2e-64 UniRef50_Q4K821 Transcriptional regulator, AraC family n=22 Tax=... 248 2e-64 UniRef50_B0VLM5 Putative transcriptional regulator (AraC family)... 247 2e-64 UniRef50_Q39GD4 Transcriptional regulator, AraC family n=7 Tax=B... 247 2e-64 UniRef50_B4SSQ8 Transcriptional regulator, AraC family n=3 Tax=S... 247 4e-64 UniRef50_A1K8N6 Putative AraC-family transcriptional regulator n... 244 2e-63 UniRef50_Q8L1B2 Transcriptional factor PhcT (Fragment) n=1 Tax=C... 244 3e-63 UniRef50_D1SXH7 Transcriptional regulator, AraC family n=1 Tax=A... 244 3e-63 UniRef50_D0J513 Pyridoxamine 5'-phosphate oxidase-related protei... 243 5e-63 UniRef50_D0B292 Transcriptional regulator n=40 Tax=Rhizobiales R... 243 6e-63 UniRef50_Q47EU9 Transcriptional regulator, AraC family n=4 Tax=B... 242 6e-63 UniRef50_Q4ZYQ3 Helix-turn-helix, AraC type:Arac protein, arabin... 242 9e-63 UniRef50_Q7W072 Probable transcriptional regulator n=3 Tax=Borde... 242 1e-62 UniRef50_C1DH76 Transcriptional regulator, AraC-family n=3 Tax=P... 242 1e-62 UniRef50_Q15UL1 Transcriptional regulator, AraC family n=3 Tax=A... 241 1e-62 UniRef50_Q2RRF5 Transcriptional regulator, AraC family n=2 Tax=A... 241 2e-62 UniRef50_A4WDQ0 Transcriptional regulator, AraC family n=18 Tax=... 241 2e-62 UniRef50_C3K8M6 Putative AraC-family regulatory protein n=1 Tax=... 241 3e-62 UniRef50_A6WQB9 Helix-turn-helix-domain containing protein AraC ... 240 4e-62 UniRef50_Q2SEK4 AraC-type DNA-binding domain-containing protein ... 239 7e-62 UniRef50_Q221Z0 Transcriptional regulator, AraC family n=9 Tax=P... 239 7e-62 UniRef50_Q4K6D5 Transcriptional regulator, AraC family n=8 Tax=P... 239 9e-62 UniRef50_Q47Y50 Transcriptional regulator, araC family n=1 Tax=C... 239 1e-61 UniRef50_B3RAF2 Putative Transcriptional Regulator, AraC family ... 238 1e-61 UniRef50_A7K1S8 Transcriptional regulator AraC family protein n=... 238 2e-61 UniRef50_B3QB90 Transcriptional regulator, AraC family n=3 Tax=A... 237 2e-61 UniRef50_Q0KFJ5 Transcriptional regulator, AraC-family n=11 Tax=... 237 4e-61 UniRef50_B5WKD5 Transcriptional regulator, AraC family n=1 Tax=B... 236 5e-61 UniRef50_B0RW44 Transcriptional regulator, AraC family n=6 Tax=X... 236 5e-61 UniRef50_A5FCF5 Transcriptional regulator, AraC family n=1 Tax=F... 236 5e-61 UniRef50_Q13ID0 Transcriptional regulator, AraC family n=1 Tax=B... 236 9e-61 UniRef50_A3QGH9 Transcriptional regulator, AraC family n=1 Tax=S... 236 9e-61 UniRef50_A3Y5B2 Probable transcriptional regulator n=1 Tax=Marin... 235 1e-60 UniRef50_B1KGB7 Transcriptional regulator, AraC family n=2 Tax=S... 235 1e-60 UniRef50_B4EJY3 AraC family regulatory protein n=10 Tax=Burkhold... 234 2e-60 UniRef50_A0NPK3 Probable transcriptional regulator protein, AraC... 234 3e-60 UniRef50_D1P6X5 Transcriptional regulator, AraC family n=1 Tax=P... 232 8e-60 UniRef50_Q39NN6 Transcriptional regulator, AraC family n=9 Tax=B... 232 1e-59 UniRef50_A3D530 Transcriptional regulator, AraC family n=12 Tax=... 232 1e-59 UniRef50_B4SQ42 Transcriptional regulator, AraC family n=5 Tax=X... 231 2e-59 UniRef50_Q2BIT2 Transcriptional regulator, AraC family protein n... 231 2e-59 UniRef50_Q1ZB18 Transcriptional Regulator, AraC family protein n... 231 2e-59 UniRef50_C6RQZ7 Transcriptional regulator, AraC family n=1 Tax=A... 231 3e-59 UniRef50_B1TGD6 Transcriptional regulator, AraC family n=7 Tax=P... 231 3e-59 UniRef50_B9R0N9 Transcriptional regulator, AraC family protein n... 230 3e-59 UniRef50_A5V470 Transcriptional regulator, AraC family n=1 Tax=S... 230 4e-59 UniRef50_A9ISK4 Transcriptional regulator, AraC family n=3 Tax=P... 230 4e-59 UniRef50_Q11FA3 Transcriptional regulator, AraC family n=1 Tax=C... 230 4e-59 UniRef50_Q2K0F2 Probable transcriptional regulator protein, AraC... 229 6e-59 UniRef50_A3RTS8 Transcriptional regulator, AraC family n=4 Tax=R... 229 8e-59 UniRef50_B1JZJ0 Transcriptional regulator, AraC family n=2 Tax=B... 228 1e-58 UniRef50_Q3JQZ2 Transcriptional regulator, AraC family n=59 Tax=... 228 1e-58 UniRef50_A9IA98 Transcriptional regulator, AraC family n=1 Tax=B... 228 1e-58 UniRef50_A1TK09 Transcriptional regulator, AraC family n=4 Tax=P... 228 2e-58 UniRef50_B7GXZ6 Bacterial regulatory helix-turn-helix protein, A... 228 2e-58 UniRef50_C4XL68 AraC family transcriptional regulator n=2 Tax=De... 227 3e-58 UniRef50_B7GW45 Bacterial regulatory helix-turn-helix protein, A... 227 3e-58 UniRef50_B6ELX6 HTH-type transcriptional regulator, AraC family ... 227 4e-58 UniRef50_B2I1A9 AraC-type DNA-binding domain-containing protein ... 226 5e-58 UniRef50_B5EUU3 Transcriptional regulator, AraC/XylS family n=29... 226 5e-58 UniRef50_Q7MFB7 AraC-type DNA-binding domain-containing protein ... 226 8e-58 UniRef50_Q7D2T6 Transcriptional regulator, AraC family n=7 Tax=P... 226 9e-58 UniRef50_UPI00019092C6 AraC family transcriptional regulator n=1... 225 1e-57 UniRef50_C9PF84 Transcriptional regulator AraC family n=1 Tax=Vi... 225 1e-57 UniRef50_D0J7G0 Transcriptional regulator, AraC family n=11 Tax=... 225 1e-57 UniRef50_B7UVC2 Probable transcriptional regulator n=6 Tax=Pseud... 225 2e-57 UniRef50_B1JGH9 Transcriptional regulator, AraC family n=26 Tax=... 224 2e-57 UniRef50_A6V354 Transcriptional regulator, AraC family n=3 Tax=P... 224 2e-57 UniRef50_Q13M62 Transcriptional regulator, AraC family n=4 Tax=B... 224 3e-57 UniRef50_C7MAZ5 Transcriptional regulator containing an amidase ... 224 3e-57 UniRef50_B0T088 Transcriptional regulator, AraC family n=1 Tax=C... 224 3e-57 UniRef50_C0YIN0 AraC/XylS family transcriptional regulator n=1 T... 223 6e-57 UniRef50_Q5E435 Transcriptional regulator, AraC family n=3 Tax=V... 223 6e-57 UniRef50_A6V4X5 Probable transcriptional regulator n=7 Tax=Pseud... 223 6e-57 UniRef50_C1MBM6 Transcriptional regulator n=2 Tax=Citrobacter Re... 222 8e-57 UniRef50_C8Q2C9 Transcriptional regulator, AraC family n=1 Tax=P... 222 1e-56 UniRef50_D2B3A1 AraC family transcriptional regulator n=5 Tax=Ac... 222 1e-56 UniRef50_A4CF02 Transcriptional regulator, araC family protein n... 221 2e-56 UniRef50_Q28MP8 Transcriptional regulator, AraC family n=1 Tax=J... 221 2e-56 UniRef50_A5F0T8 Transcriptional regulator, AraC/XylS family n=40... 221 2e-56 UniRef50_A1BBK0 Transcriptional regulator, AraC family n=2 Tax=A... 221 2e-56 UniRef50_Q0TI30 Transcriptional regulator, AraC family n=14 Tax=... 221 3e-56 UniRef50_C5CUS1 Transcriptional regulator, AraC family n=1 Tax=V... 220 4e-56 UniRef50_C4WMA6 AraC family transcriptional regulator n=1 Tax=Oc... 220 4e-56 UniRef50_C9NXQ1 Transcriptional regulator AraC family n=1 Tax=Vi... 220 4e-56 UniRef50_B9JII8 Transcriptional regulator protein n=1 Tax=Agroba... 220 4e-56 UniRef50_Q4KJ22 Transcriptional regulator, AraC family n=7 Tax=P... 220 5e-56 UniRef50_C3JKZ1 Transcriptional regulator, AraC family n=2 Tax=R... 219 7e-56 UniRef50_D1X8C9 Transcriptional regulator, AraC family n=2 Tax=S... 219 7e-56 UniRef50_Q01YV9 Transcriptional regulator, AraC family n=1 Tax=C... 219 8e-56 UniRef50_A8GAI3 Transcriptional regulator, AraC family n=2 Tax=S... 219 1e-55 UniRef50_Q47UH5 Substrate-binding transcriptional regulator, Ara... 219 1e-55 UniRef50_C7JHN7 Transcriptional regulator AraC n=8 Tax=Acetobact... 219 1e-55 UniRef50_Q2KXY1 AraC-family transcriptional regulator n=5 Tax=Pr... 218 1e-55 UniRef50_A8T3D4 AraC-type DNA-binding domain-containing protein ... 217 3e-55 UniRef50_A9ILC9 Transcriptional regulator, AraC family n=3 Tax=B... 217 3e-55 UniRef50_C8QEY4 Transcriptional regulator, AraC family n=1 Tax=P... 217 3e-55 UniRef50_Q2BQ21 Transcriptional regulator, AraC family protein n... 217 3e-55 UniRef50_D1XHM7 Transcriptional regulator, AraC family n=1 Tax=S... 217 4e-55 UniRef50_Q7D3B7 Transcriptional regulator. AraC family n=2 Tax=A... 216 5e-55 UniRef50_A8GH45 Transcriptional regulator, AraC family n=18 Tax=... 216 5e-55 UniRef50_B3Q9E6 Transcriptional regulator, AraC family n=2 Tax=R... 216 7e-55 UniRef50_Q2L001 AraC-family transcriptional regulator n=4 Tax=Bo... 216 8e-55 UniRef50_C6CCZ8 Transcriptional regulator, AraC family n=3 Tax=D... 216 8e-55 UniRef50_B2UKA3 Transcriptional regulator, AraC family n=8 Tax=B... 215 1e-54 UniRef50_Q7VTI7 AraC-family regulatory protein n=3 Tax=Bordetell... 214 2e-54 UniRef50_A8AKK6 Putative uncharacterized protein n=1 Tax=Citroba... 214 2e-54 UniRef50_A0KEB0 Transcriptional regulator, AraC/XylS family n=25... 214 3e-54 UniRef50_C6DFV4 Transcriptional regulator, AraC family n=1 Tax=P... 213 4e-54 UniRef50_A1VPE7 Transcriptional regulator, AraC family n=2 Tax=C... 213 5e-54 UniRef50_UPI0001B55F3C AraC family transcriptional regulator n=3... 212 8e-54 UniRef50_A6VY36 Helix-turn-helix-domain containing protein AraC ... 212 1e-53 UniRef50_A9BNM6 Transcriptional regulator, AraC family n=3 Tax=P... 211 1e-53 UniRef50_C8QCP4 Transcriptional regulator, AraC family n=1 Tax=P... 211 2e-53 UniRef50_B1LVX0 Transcriptional regulator, AraC family n=3 Tax=R... 211 2e-53 UniRef50_Q7NRZ6 Probable transcriptional regulator AraC family n... 211 2e-53 UniRef50_Q7CRR0 Transcriptional regulator, AraC family n=4 Tax=R... 211 3e-53 UniRef50_Q13VV8 Transcriptional regulator, AraC family n=2 Tax=P... 211 3e-53 UniRef50_A8G994 Transcriptional regulator, AraC family n=12 Tax=... 209 7e-53 UniRef50_B4SMW0 Transcriptional regulator, AraC family n=3 Tax=S... 209 8e-53 UniRef50_B4EHM1 AraC family regulatory protein n=5 Tax=Burkholde... 209 8e-53 UniRef50_D1VDY4 Transcriptional regulator, AraC family n=1 Tax=F... 208 1e-52 UniRef50_C1A6S8 AraC family transcriptional regulator n=1 Tax=Ge... 208 1e-52 UniRef50_D2BBL9 Transcriptional regulator, AraC-family n=18 Tax=... 207 3e-52 UniRef50_Q8EHW8 Transcriptional regulator, AraC/XylS family n=3 ... 207 3e-52 UniRef50_C9PF82 Substrate-binding transcriptional regulator AraC... 207 3e-52 UniRef50_C7I316 Transcriptional regulator, AraC family n=1 Tax=T... 207 4e-52 UniRef50_Q0B8S9 Transcriptional regulator, AraC family n=1 Tax=B... 206 6e-52 UniRef50_D1BGA1 DNA-binding domain-containing protein, AraC-type... 206 6e-52 UniRef50_A0KTL0 Transcriptional regulator, AraC family n=25 Tax=... 206 7e-52 UniRef50_Q3JG82 AraC family regulatory protein n=50 Tax=Proteoba... 206 7e-52 UniRef50_A5U9G2 AraC-family transcriptional regulator n=12 Tax=M... 206 8e-52 UniRef50_A8L2S5 Transcriptional regulator, AraC family n=3 Tax=A... 205 1e-51 UniRef50_Q5FU43 Transcriptional regulator, AraC family n=1 Tax=G... 204 2e-51 UniRef50_B5XX95 Transcriptional regulator, AraC family n=7 Tax=E... 204 2e-51 UniRef50_Q5LMG8 Transcriptional regulator, AraC family n=1 Tax=R... 204 4e-51 UniRef50_D0L975 Helix-turn-helix-domain containing protein AraC ... 202 7e-51 UniRef50_B0TZR0 Transcriptional regulator, AraC family n=1 Tax=F... 202 8e-51 UniRef50_A0R133 Transcriptional regulator, AraC family protein n... 202 9e-51 UniRef50_A0KHN7 Transcriptional regulator, AraC family n=1 Tax=A... 202 1e-50 UniRef50_C4WPU9 AraC family transcriptional regulator n=1 Tax=Oc... 202 1e-50 UniRef50_B4SKF1 Transcriptional regulator, AraC family n=2 Tax=S... 201 2e-50 UniRef50_D1UHS6 Transcriptional regulator, AraC family n=1 Tax=B... 200 3e-50 UniRef50_Q2NTH9 Putative transcriptional regulator n=1 Tax=Sodal... 200 3e-50 UniRef50_A9BQK3 Transcriptional regulator, AraC family n=8 Tax=B... 200 6e-50 UniRef50_C3X452 Putative uncharacterized protein n=2 Tax=Oxaloba... 199 7e-50 UniRef50_C8QA12 Transcriptional regulator, AraC family n=1 Tax=P... 199 8e-50 UniRef50_A5FK83 Transcriptional regulator, AraC family n=3 Tax=B... 199 1e-49 UniRef50_D1WVC3 Transcriptional regulator, AraC family n=3 Tax=A... 198 1e-49 UniRef50_B5GYF3 AraC-family transcriptional regulator n=4 Tax=Ac... 198 1e-49 UniRef50_D1XRU9 Transcriptional regulator, AraC family n=4 Tax=A... 197 2e-49 UniRef50_B9TN09 HTH-type transcriptional repressor of iron prote... 197 3e-49 UniRef50_B4SPX2 AraC protein arabinose-binding/dimerisation n=2 ... 197 4e-49 UniRef50_D1BCS3 DNA-binding domain-containing protein, AraC-type... 196 7e-49 UniRef50_Q13JN4 Transcriptional regulator, AraC family n=13 Tax=... 195 1e-48 UniRef50_D1BHF8 DNA-binding domain-containing protein, AraC-type... 195 1e-48 UniRef50_Q28KW4 Transcriptional regulator, AraC family n=1 Tax=J... 195 1e-48 UniRef50_C3JM12 Transcriptional regulator, AraC family n=2 Tax=R... 194 2e-48 UniRef50_A6SYJ9 Transcriptional regulator, AraC family n=2 Tax=O... 194 2e-48 UniRef50_Q1ZV01 Transcriptional regulator, AraC family protein n... 194 2e-48 UniRef50_C3JND7 Transcriptional regulator, AraC family n=2 Tax=R... 194 4e-48 UniRef50_D0J7V7 Transcriptional regulator, AraC family n=6 Tax=P... 193 5e-48 UniRef50_Q212B5 Transcriptional regulator, AraC family n=1 Tax=R... 193 6e-48 UniRef50_A8L421 Transcriptional regulator, AraC family n=12 Tax=... 192 8e-48 UniRef50_D1XNW1 Transcriptional regulator, AraC family n=1 Tax=S... 192 8e-48 UniRef50_C9PG34 Transcriptional regulator AraC family n=1 Tax=Vi... 191 3e-47 UniRef50_C3JWU5 Transcriptional regulator, AraC family n=4 Tax=R... 191 3e-47 UniRef50_B5I4G1 AraC-family transcriptional regulator n=1 Tax=St... 190 4e-47 UniRef50_B9K583 Transcriptional regulator n=3 Tax=Alphaproteobac... 189 1e-46 UniRef50_D1VIF5 Transcriptional regulator, AraC family n=1 Tax=F... 188 2e-46 UniRef50_C0YKZ5 AraC family transcriptional regulator n=1 Tax=Ch... 188 2e-46 UniRef50_A8U313 Helix-turn-helix, AraC type:Arac protein, arabin... 187 5e-46 UniRef50_C3JLV5 AraC-family transcriptional regulator n=2 Tax=Rh... 186 8e-46 UniRef50_C0YJ90 AraC family transcriptional regulator n=1 Tax=Ch... 185 1e-45 UniRef50_C3JVD6 Transcriptional regulator, AraC family n=3 Tax=R... 185 2e-45 UniRef50_A5VF29 Transcriptional regulator, AraC family n=2 Tax=A... 185 2e-45 UniRef50_D1BBW6 DNA-binding domain-containing protein, AraC-type... 184 4e-45 UniRef50_Q84HW2 Transcription regulator n=1 Tax=Rhizobium sp. TA... 182 8e-45 UniRef50_UPI000050FCF9 AraC family transcriptional regulator n=1... 182 8e-45 UniRef50_Q7NRR7 Probable transcriptional regulator n=1 Tax=Chrom... 182 1e-44 UniRef50_Q091X7 Helix-turn-helix, AraC type n=1 Tax=Stigmatella ... 182 2e-44 UniRef50_D0LZ72 Transcriptional regulator, AraC family n=1 Tax=H... 181 2e-44 UniRef50_A8LCQ9 Transcriptional regulator, AraC family n=1 Tax=F... 181 2e-44 UniRef50_C2FVA1 AraC family transcriptional regulator n=1 Tax=Sp... 181 2e-44 UniRef50_B5CUH6 Putative uncharacterized protein n=1 Tax=Bactero... 181 2e-44 UniRef50_A5EPW3 Transcriptional regulator, AraC family n=3 Tax=B... 180 3e-44 UniRef50_C7PA31 Transcriptional regulator, AraC family n=1 Tax=C... 180 5e-44 UniRef50_UPI000197B237 hypothetical protein BACCOPRO_02201 n=1 T... 179 6e-44 UniRef50_Q2S7S2 AraC-type DNA-binding domain-containing protein ... 179 7e-44 UniRef50_D1BFL9 DNA-binding domain-containing protein, AraC-type... 179 8e-44 UniRef50_B7H290 Bacterial regulatory helix-turn-helix protein, A... 179 1e-43 UniRef50_A6GAR4 Putative transcriptional regulator n=1 Tax=Plesi... 177 3e-43 UniRef50_C5PU57 AraC family transcriptional regulator n=1 Tax=Sp... 176 8e-43 UniRef50_Q28SV1 Transcriptional regulator, AraC family n=1 Tax=J... 175 1e-42 UniRef50_D0KLM1 Transcriptional regulator, AraC family n=2 Tax=E... 175 2e-42 UniRef50_A6ED21 Transcriptional regulator, AraC family protein n... 174 4e-42 UniRef50_C7PGY2 Transcriptional regulator, AraC family n=1 Tax=C... 173 5e-42 UniRef50_D1WSG5 Transcriptional regulator, AraC family n=3 Tax=S... 171 2e-41 UniRef50_B5H317 AraC-type DNA-binding domain-containing protein ... 171 2e-41 UniRef50_A3XQJ9 Probable transcription regulator protein n=1 Tax... 170 5e-41 UniRef50_D1BHB2 Transcriptional regulator, AraC family n=10 Tax=... 169 8e-41 UniRef50_A9GKK5 Transcriptional regulator, AraC family n=1 Tax=S... 169 9e-41 UniRef50_C6C927 Transcriptional regulator, AraC family n=2 Tax=D... 167 3e-40 UniRef50_C7R5F1 Transcriptional regulator, AraC family n=1 Tax=J... 167 4e-40 UniRef50_C5PVX4 AraC family transcriptional regulator n=2 Tax=Sp... 167 5e-40 UniRef50_C0YKT6 AraC family transcriptional regulator n=3 Tax=Ba... 162 9e-39 UniRef50_Q1QZK4 Transcriptional regulator, AraC family n=1 Tax=C... 161 2e-38 UniRef50_B3JKA4 Putative uncharacterized protein n=1 Tax=Bactero... 159 1e-37 UniRef50_A5KTY3 Transcriptional regulator, araC family protein n... 158 2e-37 UniRef50_Q5WI14 AraC/XylS family transcriptional regulator n=1 T... 155 2e-36 UniRef50_Q1LNA3 Transcriptional regulator, AraC family n=1 Tax=C... 155 2e-36 UniRef50_C3JMH4 Transcriptional regulator, AraC family n=2 Tax=R... 152 2e-35 UniRef50_A0KFD0 Transcriptional regulator, AraC family n=1 Tax=A... 151 3e-35 UniRef50_Q3HKF1 Transcriptional regulator, AraC family n=2 Tax=R... 150 5e-35 UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacte... 150 5e-35 UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=D... 147 3e-34 Sequences not found previously or not previously below threshold: UniRef50_C0YRY4 AraC family transcriptional regulator n=1 Tax=Ch... 194 4e-48 UniRef50_UPI000197B111 hypothetical protein BACCOPRO_01534 n=1 T... 151 2e-35 >UniRef50_P76241 Uncharacterized HTH-type transcriptional regulator yeaM n=55 Tax=Enterobacteriaceae RepID=YEAM_ECOLI Length = 273 Score = 365 bits (936), Expect = 1e-99, Method: Composition-based stats. Identities = 273/273 (100%), Positives = 273/273 (100%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW Sbjct: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN Sbjct: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120 Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW Sbjct: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180 Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF Sbjct: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240 Query: 241 ITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ 273 ITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ Sbjct: 241 ITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ 273 >UniRef50_Q1ZT94 Putative transcriptional regulator n=3 Tax=Photobacterium RepID=Q1ZT94_PHOAS Length = 266 Score = 282 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 107/262 (40%), Positives = 154/262 (58%), Gaps = 4/262 (1%) Query: 1 MMHRLNLN----GYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVE 56 M + LN ++ D + + AVA + P H HRKGQL+L L G + C + Sbjct: 1 MTKNITLNKTIPSFDSDSYSQKAVAMRFSRSDVDEELPFHTHRKGQLVLPLSGCVRCKIA 60 Query: 57 NALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELIL 116 NA+WMVP AVWIP V HS ++ + ++C LFIEP + +P CTL +SPL RELI+ Sbjct: 61 NAIWMVPTNCAVWIPSQVPHSLTISDDIDICNLFIEPDVIGLPEKACTLSVSPLLRELIV 120 Query: 117 TLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGA 176 LA E T RL+ VL EL P +Q P+ P+++ + + P + Sbjct: 121 KLAELDQFYEDEGNTARLVDVLIYELSTMPSEQFDFPIPEEPRLQKIALALIANPSDRST 180 Query: 177 LGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDS 236 +G+WA +AMSER LARL+ +E GL+F WR QL +++ALQ L G+ VQ+++ LGY+S Sbjct: 181 VGEWASKYAMSERTLARLVKQELGLTFGNWRGQLHIVIALQKLSSGEPVQRISEDLGYES 240 Query: 237 TTAFITMFKKGLGQTPGRYIAR 258 +AFIT FK+ LG+ P +YI + Sbjct: 241 VSAFITFFKRTLGRPPKQYIKK 262 >UniRef50_C5AN13 Helix-turn-helix-domain containing protein AraC type n=15 Tax=cellular organisms RepID=C5AN13_BURGB Length = 283 Score = 278 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 101/258 (39%), Positives = 154/258 (59%), Gaps = 1/258 (0%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 + D VA T + H+HR+ QL+ ++ G + C +E+ +W+VPPQ AVWI Sbjct: 14 DVDNVPRPVVALSAMTVTKDWEHAKHRHRRAQLLYSVRGILNCEIEDGVWIVPPQCAVWI 73 Query: 71 PGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129 PG + H+ + + E LF+EP A +P +CCT+ +SPL REL+L +A Sbjct: 74 PGDLPHAARGSGETECHCLFVEPDAAPDLPKSCCTISVSPLLRELLLKVACFPELYPLGS 133 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 RLI VL DEL P + LHLP+ P++R + EM+ P + + G WA MSER Sbjct: 134 REDRLIAVLLDELAMAPVEDLHLPMPRDPRLRRLAEMLLTDPTDKTSKGDWATRIGMSER 193 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 +++RL++ E G+SF +W +QL +I+ALQ L KG++VQ VA LGY++ + F+TMF+K +G Sbjct: 194 SMSRLLMHEIGMSFGRWCRQLHVILALQRLTKGESVQTVALELGYENASGFVTMFRKAVG 253 Query: 250 QTPGRYIARLTTVSPQSA 267 + P RY+A + +A Sbjct: 254 KPPARYLADRMVNARSAA 271 >UniRef50_Q216D2 Transcriptional regulator, AraC family n=7 Tax=Bacteria RepID=Q216D2_RHOPB Length = 280 Score = 276 bits (705), Expect = 7e-73, Method: Composition-based stats. Identities = 109/266 (40%), Positives = 165/266 (62%), Gaps = 2/266 (0%) Query: 9 GYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAV 68 +PD VAF + L H+HRK QL+L+L G +TC ++ LW+VPPQ+A+ Sbjct: 13 WSDPDDIPRPVVAFGVTLAGPGLELAPHRHRKAQLLLSLRGVLTCEAQSGLWLVPPQHAI 72 Query: 69 WIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRA 127 WIPGG H+ + T E +F+EP+ + MP +CCT+ ++PL REL++ A Sbjct: 73 WIPGGALHAIRATGTIEGYDIFVEPALTLGMPASCCTMSVTPLLRELLVRAAGFPLLYPE 132 Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187 L +L DE+ Q+L+LP+ + ++R +VE+M P + G + WA +S Sbjct: 133 GGAESHLFTLLLDEVATASVQRLYLPMPADVRLRRIVELMMADPTDRGTMASWAKRAGLS 192 Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247 ER LARL+ +ETG+SF +WRQQL +++ALQ + +G +Q++A LGY+S +F+TMF+K Sbjct: 193 ERTLARLLARETGMSFGRWRQQLTIMLALQRMAEGAPIQRLAVELGYESAASFVTMFRKT 252 Query: 248 LGQTPGRYIARLTTVSPQSAKPDPRQ 273 LG +PGRY+ARL SP +A DP+Q Sbjct: 253 LGSSPGRYMARLRG-SPAAADQDPKQ 277 >UniRef50_A4JQ17 Transcriptional regulator, AraC family n=56 Tax=Proteobacteria RepID=A4JQ17_BURVG Length = 325 Score = 274 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 132/257 (51%), Positives = 170/257 (66%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 +PD AVA C+H PVH+H+KGQL+LALHGA+TC V A W+VPPQ VWI Sbjct: 46 DPDAIDRPAVAMCMHVDEHAPEIPVHKHQKGQLVLALHGAVTCRVAGAFWIVPPQCGVWI 105 Query: 71 PGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130 PG + HSN T NA LC+LF EP V +PT CCTL ISP+ RE+I+ LA Sbjct: 106 PGEMPHSNHATPNARLCYLFAEPGVVDLPTECCTLSISPMLREMIMHLAGAPLDYEQGGH 165 Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190 T RL +VL EL P ++L+LPV+ HP+IR M + + P + + QWA AMSER+ Sbjct: 166 TDRLARVLLHELTLMPVERLYLPVTDHPRIRQMADALNANPGDRSTVSQWAKRLAMSERS 225 Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250 LARL+V ETGL+F +WRQQLQL++A++ L G +VQ+V+ LGY+S TAFITMFKK LG Sbjct: 226 LARLVVSETGLTFGRWRQQLQLLVAVRELAGGASVQRVSDELGYESVTAFITMFKKALGH 285 Query: 251 TPGRYIARLTTVSPQSA 267 +PGRY A L ++ Sbjct: 286 SPGRYFAALARTQSEAG 302 >UniRef50_B5RKL9 Transcriptional regulator, AraC family n=2 Tax=cellular organisms RepID=B5RKL9_KLEP3 Length = 264 Score = 273 bits (698), Expect = 5e-72, Method: Composition-based stats. Identities = 124/254 (48%), Positives = 169/254 (66%) Query: 6 NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65 + + D +AA+A + + + H HRKGQLIL++ GA+ C V++ALW+VPP Sbjct: 10 SPEEFNADDFSQAAIALHVSSSGEYAGQRPHAHRKGQLILSMRGAVRCEVDDALWLVPPG 69 Query: 66 YAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQ 125 +AVW+PG + H ++T NA+ CFLFIEP A MP CCT+ ++PL REL+L LA + T Sbjct: 70 HAVWVPGEIPHRCRITKNADTCFLFIEPGAAAMPEICCTIAVTPLVRELVLYLAEQEHTY 129 Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185 + T RL VL + +P P + LHLPVS HPKIR M E + P + L QWA A Sbjct: 130 SPDSKTARLAAVLLEHIPDVPVEALHLPVSDHPKIRIMAEALFNEPDDRRTLKQWAAHLA 189 Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245 +SER+LARLI + TG+SF +WRQQL L++AL L +G VQ+VA TLGYDS +AFITMF+ Sbjct: 190 ISERSLARLIKEATGMSFGRWRQQLHLMIALSHLSEGQPVQRVAGTLGYDSVSAFITMFR 249 Query: 246 KGLGQTPGRYIARL 259 K LG++P +Y + L Sbjct: 250 KALGKSPTQYFSSL 263 >UniRef50_Q0B1C2 Transcriptional regulator, AraC family n=5 Tax=Proteobacteria RepID=Q0B1C2_BURCM Length = 273 Score = 273 bits (697), Expect = 6e-72, Method: Composition-based stats. Identities = 98/262 (37%), Positives = 152/262 (58%) Query: 4 RLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63 ++N ++PD ++ + E P+H HRKGQ+++AL G++ C + W+VP Sbjct: 12 KINYQPFDPDSVDLPVISVLLETSGKEDELPMHVHRKGQMVVALSGSVMCRSPSGWWIVP 71 Query: 64 PQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTT 123 P AVWIPGG+ HSN + A+L +FI P +PT C + I+PL RELI +LA Sbjct: 72 PNGAVWIPGGIPHSNHASDFAKLYVIFIPPDEAGLPTDCRSFTITPLIRELIRSLARFPP 131 Query: 124 TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183 + RL +VL D+L + LP+S +P+++ + + P + + +W Sbjct: 132 DYPKDGPVGRLARVLLDQLALLAPDDVFLPISDNPRLQQIASALLDNPADRSTIAEWGRR 191 Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITM 243 +AMSER LARL+ ETG++F +WR++L +I+ALQ L G +V VA LGY+ +FITM Sbjct: 192 YAMSERTLARLVRSETGMTFGRWRERLHIIIALQRLSAGASVHAVALELGYEGPNSFITM 251 Query: 244 FKKGLGQTPGRYIARLTTVSPQ 265 FKK +GQ+PG++ S + Sbjct: 252 FKKTMGQSPGKFRVDNKEASSR 273 >UniRef50_D1RWK8 Transcriptional regulatory protein n=2 Tax=Gammaproteobacteria RepID=D1RWK8_SEROD Length = 284 Score = 271 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 105/269 (39%), Positives = 153/269 (56%), Gaps = 1/269 (0%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 +M + ++ D+ A A + + H+HRK QLI + G I C EN LW Sbjct: 12 LMPVITEPRFDIDQVPRAIFAVQGSTISSDWEMAPHRHRKAQLIYTVRGMIRCEAENGLW 71 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA 119 +VPPQ A+W+PG V H+ Q + E LF++ A+ +PT CCTL +SPL REL+L + Sbjct: 72 LVPPQCALWMPGNVLHNAQGAGDTECYCLFVDQDAIAGLPTHCCTLAVSPLLRELLLQAS 131 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 + RL VL D++ P + LHLPVS +IR + E + P + L Q Sbjct: 132 GFDPLYDEQGPEGRLTTVLLDQVVNAPIENLHLPVSQDARIRQLTERLLANPADKATLNQ 191 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 WA MSER+L R + ++ G+SF WR+QL +++ALQ L KGD+VQKVA LGY+S + Sbjct: 192 WAQRIGMSERSLNRTLQQQMGMSFGHWRRQLHVMLALQRLTKGDSVQKVALDLGYESASG 251 Query: 240 FITMFKKGLGQTPGRYIARLTTVSPQSAK 268 F+TMF+K +G+ P RY+A + + Sbjct: 252 FVTMFRKAVGKPPARYLAERSAAGQAAGS 280 >UniRef50_C5CZV0 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZV0_VARPS Length = 292 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 121/259 (46%), Positives = 159/259 (61%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 HR +E D+ A I P HQH +GQL + L G +TC V ALWM Sbjct: 34 THRQGAWTFEFDKMEARVAAVRIRTEALAEGLPAHQHPQGQLAMVLRGTVTCEVPGALWM 93 Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANR 121 P +WIPGGV HS +V+A +CFLF+E +A MP TCC+L +SPL RELIL LA Sbjct: 94 APLHGGLWIPGGVPHSLRVSAEGNVCFLFVEDAAAAMPQTCCSLSVSPLLRELILYLAAL 153 Query: 122 TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWA 181 + EP RL VL D+L + P + +HLPVS P++R +++ + + P + QWA Sbjct: 154 PEGAQREPQALRLHAVLLDQLARMPTEAMHLPVSEEPRLRRLIDALMRDPADRTTAAQWA 213 Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241 AMSER L RL+ ETG+SF +W Q+L+LI+ALQ L G +VQ+VAH LGYDS +AFI Sbjct: 214 SRLAMSERTLTRLVQLETGMSFGRWSQRLRLIVALQWLTSGLSVQQVAHGLGYDSVSAFI 273 Query: 242 TMFKKGLGQTPGRYIARLT 260 MF+K +GQ P RY+AR Sbjct: 274 AMFRKAMGQPPARYLARRR 292 >UniRef50_A8G9B2 Transcriptional regulator, AraC family n=4 Tax=cellular organisms RepID=A8G9B2_SERP5 Length = 284 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 104/269 (38%), Positives = 153/269 (56%), Gaps = 1/269 (0%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 +M + ++ D+ A A + H+HRK QLI + G I C VEN LW Sbjct: 12 LMTFITEPRFDIDQVPRAIFAVQGSTIDKDWEITHHRHRKAQLIYTVRGMIRCEVENGLW 71 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA 119 +VPPQ A+W+P V H+ Q + +E LF++ A+ +PT CCTL +SPL REL+ + Sbjct: 72 LVPPQCALWMPSNVLHNAQGASASECYCLFVDQDAIAGLPTHCCTLAVSPLLRELLFQAS 131 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 + RL VL D+L + P + LHLPVS+ +IR + E + P + LGQ Sbjct: 132 AFEQLYDQQGPEGRLAGVLLDQLVKAPVENLHLPVSNDARIRQLTERLLANPADKATLGQ 191 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 WA MSER+L R + ++ G+SF WR+QL +++ALQ L +GD+VQ+VA LGY+S + Sbjct: 192 WAQRIGMSERSLNRTLQQQMGMSFGHWRRQLHVVLALQRLTQGDSVQRVALDLGYESASG 251 Query: 240 FITMFKKGLGQTPGRYIARLTTVSPQSAK 268 F+TMF+K +G+ P RY+A Sbjct: 252 FVTMFRKAVGKPPARYLAEKNAADRAQGA 280 >UniRef50_B6JB31 Transcriptional regulator, AraC-family n=5 Tax=Proteobacteria RepID=B6JB31_OLICO Length = 300 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 77/253 (30%), Positives = 124/253 (49%), Gaps = 1/253 (0%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 E +H VA D+ P+H H + QLI G IT T N W+VP AVW+ Sbjct: 43 EDYQHTSRVVAAMARDLPDKFVIPMHSHFRSQLIFGCSGVITVTTVNGTWVVPSLRAVWV 102 Query: 71 PGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEP 129 PGGVEH + T + E+ ++++P A + +P CC + +SPL RELI+ Sbjct: 103 PGGVEHEMRTTGSVEMRTIYVDPEAASHLPRECCVVAVSPLLRELIVAAVRIPNDFSDGS 162 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 +++ ++ E+ P L LP+ ++ + + + P L ++ S+R Sbjct: 163 REEKIMSLILTEIHPDPVLPLDLPMPQDRRLLRVCQAILTDPGSNSTLAEFGQTVGASQR 222 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 L R+ ETG +F +WRQQ +L ++ L +G + +A LGY+S +AF MF++ LG Sbjct: 223 TLERMFPVETGTTFSKWRQQARLQCGIRMLAEGTPISTIALDLGYESPSAFSLMFRRALG 282 Query: 250 QTPGRYIARLTTV 262 P Y + Sbjct: 283 VAPSEYFETIHAR 295 >UniRef50_C3KCF4 Putative transcriptional regulator n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KCF4_PSEFS Length = 257 Score = 266 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 76/258 (29%), Positives = 124/258 (48%), Gaps = 2/258 (0%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 M+ LN E + A ++ + P H H K QL+ A+ G + W Sbjct: 1 MIKPLNEFLQEINEGAWAVISSATDY-PENWVIPDHSHEKHQLLYAIEGVMVVYSALNQW 59 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA 119 VPP +W+P G HS + ++ +F+ P MP T+ ISPL ELI Sbjct: 60 TVPPNRGIWMPSGQVHSLRCVGTLKMRSVFVRPDRFPNMPGEPKTVSISPLLSELIKASV 119 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 + + R++ ++ DEL P L LP + P+I+ + + P + + Sbjct: 120 SLKPPYAEDSREARIMHLILDELAILPALPLALPQPADPRIKQICLALQDDPGDASTVAD 179 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 W+ + + + RL K TG++F QWRQQ +L++AL+ + G+ V +A LGY+S +A Sbjct: 180 WSARLNLDQTTIQRLFRKATGMTFGQWRQQARLLLALERIAVGEKVIDIALELGYESPSA 239 Query: 240 FITMFKKGLGQTPGRYIA 257 F +MFKK G+TP ++ Sbjct: 240 FTSMFKKQFGKTPSQFFR 257 >UniRef50_D2M677 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M677_RHOPA Length = 294 Score = 263 bits (671), Expect = 7e-69, Method: Composition-based stats. Identities = 100/271 (36%), Positives = 160/271 (59%), Gaps = 2/271 (0%) Query: 4 RLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63 R + + Y + + A + + S H+H K QL+ G I C VE+ +W+VP Sbjct: 6 RGDWSSYVDEVPRDLVAANGVGSLESIEQSKRHRHDKAQLLYCARGVINCEVEDGVWIVP 65 Query: 64 PQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRT 122 PQ A+WIPGG+ H+ + E LF+ P A +P TCCT+ IS L R L++ + Sbjct: 66 PQCAIWIPGGLPHAAFGSGEVECICLFVAPDAAAGLPVTCCTIAISDLLRHLLIRASELP 125 Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182 + R++ V+ DEL + P +QL LP+ S P+++ + E++ P + + +WAG Sbjct: 126 ERYDVDGPDGRIVAVILDELAKAPVEQLCLPIPSDPRLKQLAELLVSSPADHATVAEWAG 185 Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242 A+SER+L+R+++ E G+SF WR+QL +I+AL+ L G+TVQ VA LGY+S ++F+T Sbjct: 186 RVALSERSLSRMLMDEIGMSFGHWRRQLHVILALRRLSAGETVQTVALDLGYESASSFVT 245 Query: 243 MFKKGLGQTPGRYI-ARLTTVSPQSAKPDPR 272 MF+K +G+ P RY+ R T+V + P P+ Sbjct: 246 MFRKMVGKPPIRYLVERQTSVPLSRSDPPPK 276 >UniRef50_B8J3U2 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=B8J3U2_DESDA Length = 269 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 119/263 (45%), Positives = 155/263 (58%), Gaps = 1/263 (0%) Query: 7 LNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQY 66 L + PD+ A + +E P HQH GQL+L L G+ C V LW+VPPQ Sbjct: 7 LAAFSPDQWDIPVTARKVDVVRNEYEMPTHQHTAGQLLLTLRGSTACRVFEDLWLVPPQC 66 Query: 67 AVWIPGGVEHSNQVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQ 125 AVW+P H N++TA + +C LFI + + P TCCTL ISPL RELI +A Sbjct: 67 AVWVPPNTPHCNRITARSSVCLLFIRQEHIRLLPATCCTLSISPLVRELIRHVAALPPED 126 Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185 RLIQVL DEL + P L LPVSS +++++ E + + P E L WA Sbjct: 127 MLAERGERLIQVLLDELSRMPATGLRLPVSSDIRLQSIAESITEAPAERKDLSAWARHIG 186 Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245 MS R+LARL+V+ETGLSF +WRQQL L+MA+Q L G +VQ+ A LGY+S TAFITMFK Sbjct: 187 MSRRSLARLVVRETGLSFGRWRQQLLLVMAIQMLSDGISVQQTAWDLGYESVTAFITMFK 246 Query: 246 KGLGQTPGRYIARLTTVSPQSAK 268 K LG +P +Y+ R +S Sbjct: 247 KALGASPAKYVQRYFATGTESGS 269 >UniRef50_Q4K9E0 Transcriptional regulator, AraC family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4K9E0_PSEF5 Length = 271 Score = 260 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 106/252 (42%), Positives = 147/252 (58%), Gaps = 1/252 (0%) Query: 7 LNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQY 66 +PD A I P H HRK QL+ L G ++C LW+ PPQ Sbjct: 8 DQPQDPDAIARPVCALRISTQEQRWERPWHSHRKAQLLFPLSGVLSCESAEGLWLAPPQC 67 Query: 67 AVWIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQ 125 AVWIP +H Q NA LF+EP A ++P CCTL +SPL +EL+ A Sbjct: 68 AVWIPSATDHRVQGLENALGYCLFVEPEHARSLPQACCTLAVSPLLQELLQRCAQLPYLY 127 Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185 + RL+ V DEL P++Q+HLP+ H ++R + + + P +LGQWA Sbjct: 128 DQQGAEGRLMAVALDELAAAPREQIHLPMPRHEQLRRLAGQILEQPERRLSLGQWAEQIG 187 Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245 +SER+L+RLIV ETGLSF +W++QL +++ L+ L +GD+V++VA TLGYDS +AFI MFK Sbjct: 188 LSERSLSRLIVAETGLSFGRWQRQLHILLGLKQLGRGDSVERVALTLGYDSASAFIRMFK 247 Query: 246 KGLGQTPGRYIA 257 K +GQ PGR+ A Sbjct: 248 KAVGQPPGRFFA 259 >UniRef50_Q2SP75 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SP75_HAHCH Length = 275 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 77/259 (29%), Positives = 126/259 (48%), Gaps = 3/259 (1%) Query: 6 NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65 + Y P R VA + +P H+H QLI A G + + +W++PPQ Sbjct: 18 DSGEYMPIRGERPIVARAREFPSGYRVTP-HKHECCQLIFATSGVMELVTDEGIWLIPPQ 76 Query: 66 YAVWIPGGVEHSNQVTANAELCFLFIEPSAVT--MPTTCCTLKISPLCRELILTLANRTT 123 AVW+P VEH + + L ++I+P A P TL+ISPL RELI+ + Sbjct: 77 RAVWMPPNVEHGMRARGDVSLRTMYIQPHACPVSFPQKPRTLQISPLLRELIIRAMRVPS 136 Query: 124 TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183 R++ ++ +E+ ++ L LP + +++ + + P + L W+ Sbjct: 137 NYDEGGRDGRIMSLILEEIEWSGERPLRLPATRDSRLQNLCRAILANPADPRELKDWSTV 196 Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITM 243 SER L+RL E G+S++ WRQQ+ + A+ L GD V +A LGY++ +AF M Sbjct: 197 IGASERTLSRLFRNELGVSYQYWRQQVAALNAIPRLAAGDPVTLIAADLGYETPSAFSAM 256 Query: 244 FKKGLGQTPGRYIARLTTV 262 F++ +G P Y R + Sbjct: 257 FRRIMGVAPSLYFQRQSES 275 >UniRef50_Q2F9R4 AraC-type DNA-binding domain-containing protein n=2 Tax=Vibrionaceae RepID=Q2F9R4_9VIBR Length = 265 Score = 257 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 81/257 (31%), Positives = 130/257 (50%), Gaps = 2/257 (0%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 M + + + + AV H + H HR QL+ A G + E+ LW Sbjct: 8 MSQNVKAISLDANINCLEAVVIPKHY-ANGHVIDWHCHRHNQLVYASSGVMAVETESKLW 66 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA 119 +VPPQ AVWIP H + +A + +++ PS T +P L +SP+ RE+I+ L+ Sbjct: 67 IVPPQRAVWIPAHESHKIHMYGDAAMKNVYLLPSIDTELPNQSDVLNVSPMLREMIIHLS 126 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 + Q + R++QVL D+L PQ + +P+ + K+ + + P + +L Q Sbjct: 127 EQPVVQASTDSYWRIVQVLLDQLKVAPQASIQVPLPNDAKLGLVCNSLLDKPADNRSLKQ 186 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 WA +S R L+RL E G+SF ++RQQ++L +L L + V VA G+ S +A Sbjct: 187 WAEEINVSSRTLSRLFRNEVGMSFIEYRQQVRLFHSLTLLAQTHPVTTVALECGFTSVSA 246 Query: 240 FITMFKKGLGQTPGRYI 256 F +FK+ G TPGR+ Sbjct: 247 FNHLFKQSFGVTPGRFF 263 >UniRef50_Q391T4 Transcriptional regulator, AraC family n=8 Tax=Proteobacteria RepID=Q391T4_BURS3 Length = 288 Score = 255 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 77/248 (31%), Positives = 118/248 (47%), Gaps = 3/248 (1%) Query: 13 DRHHEAAVAFCIH-AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 D H +A + A D H+H + QL+ G +LWM+PP A+WIP Sbjct: 36 DYQHAPGIAAVMPKAFPDGFVVAEHRHPRAQLVYTTTGIAEVIASQSLWMIPPHRALWIP 95 Query: 72 GGVEHSNQVTANAELCFLFIEPSAVT--MPTTCCTLKISPLCRELILTLANRTTTQRAEP 129 + H+ + E+ +++P A P + +SPL RELI+ + + Sbjct: 96 PDLPHAMRAHGQLEMRTAYVDPRAYRSATPEQPSLVNVSPLLRELIVRASAFPVEVNPDG 155 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 +IQ++ E+ +Q L LP ++ + + + P + L +WA S R Sbjct: 156 RDDLVIQLMLAEIEWSAEQPLRLPSGQDRRLARVCDAILANPADQRTLTEWADEVGASSR 215 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 LARL ETGLSF QWRQQ ++ A L G +V VA LGY++T+AF T+F++ G Sbjct: 216 TLARLFTAETGLSFSQWRQQARISAARPLLASGRSVIAVAAELGYETTSAFSTVFRRFAG 275 Query: 250 QTPGRYIA 257 TP Y Sbjct: 276 MTPSAYAK 283 >UniRef50_A5GBQ3 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=A5GBQ3_GEOUR Length = 278 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 89/227 (39%), Positives = 124/227 (54%), Gaps = 1/227 (0%) Query: 32 TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91 ++ VH H +GQLI A G + +W+VPP AVW+P EH + L LF+ Sbjct: 45 SAAVHVHPRGQLIYASSGMMRVICSRDVWVVPPSQAVWVPPNQEHEVYFPGDTALRSLFV 104 Query: 92 EPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150 +PSAVT +P C LK++PL RELIL + + R++QVL DEL L Sbjct: 105 DPSAVTGLPLQCTVLKVAPLLRELILRAVQIGNSYAPDGAEWRVMQVLLDELRIAEATPL 164 Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210 LP++ ++ +++ + K P + L W S R LARL V ETGL+F WR++L Sbjct: 165 RLPMARDERVMRVIDALLKSPGDNRGLDAWGKIAGASSRTLARLFVSETGLTFGGWRKRL 224 Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 L AL L +G+ V +A LGY S +AFI MF+K LG +P RY Sbjct: 225 LLHKALDRLDRGEQVTGIAFDLGYQSLSAFIEMFRKELGVSPRRYAR 271 >UniRef50_A9FA95 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=A9FA95_SORC5 Length = 277 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 105/243 (43%), Positives = 150/243 (61%), Gaps = 1/243 (0%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 A A + T L S H HR+ QL G +TC NALW+VPP+ A+WIP GV H Sbjct: 22 RPANAVGLSMLTGGLESEFHSHRESQLFFLERGEVTCEASNALWIVPPRSALWIPAGVLH 81 Query: 77 SNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135 + A E +F+EP A ++P CC + ++PL REL++ LA R + RL+ Sbjct: 82 KIRGRAPLEGYGVFMEPDVAPSLPAECCAVSVTPLFRELLVRLAARPALYDLDGPDARLV 141 Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 VLFDEL ++ LP+ + P++R +V+ MA+ P + +G WA + ER L RL+ Sbjct: 142 AVLFDELAAATIEKHRLPMPADPRLRKLVDAMAENPADGATMGSWARRIGVGERTLNRLL 201 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 V+ETGLSF +WRQQL +++ALQ L +G +VQ VA LGY+S ++F+TMF+K LG +P RY Sbjct: 202 VRETGLSFGRWRQQLHIVLALQRLSRGASVQSVASDLGYESASSFVTMFRKALGASPARY 261 Query: 256 IAR 258 +AR Sbjct: 262 MAR 264 >UniRef50_A8I0S5 Transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I0S5_AZOC5 Length = 272 Score = 253 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 95/246 (38%), Positives = 146/246 (59%), Gaps = 2/246 (0%) Query: 13 DRHHEAAVAFCIHAGTDELT-SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 D A V A + L SP H H+K QL+ + G I C VE+A+W+VPPQ AVWIP Sbjct: 14 DEVPRALVTANAVASLESLEQSPRHHHQKAQLLFTVRGVINCEVEDAVWIVPPQCAVWIP 73 Query: 72 GGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130 GGV H+ + E LFIEP A +P CCT+ +S L R L++ + Sbjct: 74 GGVPHTVFGSGEVECISLFIEPPATPELPNACCTITVSSLLRHLLMRANELPELYDVDGP 133 Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190 R++ V+FDEL P + L LP+ +++ + +++ P + + +WA A+SER+ Sbjct: 134 DGRIVSVIFDELAAAPVEDLRLPIPGDVRLKKLTDLLIAAPADHATVAEWASRIALSERS 193 Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250 L R++ ++ G+SF +WR+QL +++AL+ L G TVQ VA LGY+S ++F+TMF+K +G+ Sbjct: 194 LNRMLAEQVGMSFGRWRRQLHVVLALRRLSAGQTVQAVAMDLGYESASSFVTMFRKMVGK 253 Query: 251 TPGRYI 256 P RY+ Sbjct: 254 PPSRYL 259 >UniRef50_B4SJK4 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria RepID=B4SJK4_STRM5 Length = 282 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 103/262 (39%), Positives = 137/262 (52%), Gaps = 1/262 (0%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 PDR + + D P H HRK QL++A G I LW+VPPQ A+WIP Sbjct: 16 PDRVDLPVMVLGLDPIPDAWQMPFHAHRKAQLLVATRGLIMLETAAGLWVVPPQGAIWIP 75 Query: 72 GGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130 GG+ H + +F+EP V +PT C + I+P + L+ + Sbjct: 76 GGLSHRASSSGRPHGFVVFVEPGVVPGLPTHCAAMAITPFMQALLERASALPGHYEPGSA 135 Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190 RL+ V DEL P + LHLP+ S ++R + M P E L WA MSERN Sbjct: 136 QDRLMAVFLDELIAAPPEWLHLPMPSDARLRRLANAMLDTPAERATLEVWASRIGMSERN 195 Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250 ++RL ETGLS R+WR+QL +++AL L KG TVQ VA LGYDS AF+TMF+K +G Sbjct: 196 MSRLFSGETGLSVRRWRRQLHVVVALPLLAKGRTVQAVADHLGYDSAGAFVTMFRKTVGA 255 Query: 251 TPGRYIARLTTVSPQSAKPDPR 272 P R++A T P S D R Sbjct: 256 PPKRFLAERGTRQPVSDADDQR 277 >UniRef50_Q0BZS2 Transcriptional regulator, AraC family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZS2_HYPNA Length = 260 Score = 252 bits (645), Expect = 7e-66, Method: Composition-based stats. Identities = 70/248 (28%), Positives = 115/248 (46%), Gaps = 1/248 (0%) Query: 8 NGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYA 67 + ++ D VA H H + QL+ A G ++ + +++PPQ A Sbjct: 12 STHQLDLSRRPVVALA-DEYPSGFVDTAHSHERIQLLYACSGVMSVVTDKTSFVIPPQRA 70 Query: 68 VWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRA 127 VWIP V+H L L+I+P C +++ L R LIL + Sbjct: 71 VWIPSQVQHEVSCRGPVSLRTLYIDPRYERDDPDCHIVEVGQLLRALILEVTQFEHDYDL 130 Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187 + +++ +L EL P+ P+ + P++ + + + P + + QWA MS Sbjct: 131 QGREGQIVSLLVSELLASPKVPYAAPMPTDPRLVRVCREIIEHPSDQRDIDQWADIAGMS 190 Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247 R+ R +ETG+ WRQQ++L+ AL L G +V VA +GYDS +AF MF++ Sbjct: 191 RRSFTRAFKRETGMGVALWRQQVRLLEALSLLSTGSSVTSVAMDVGYDSASAFCAMFQRA 250 Query: 248 LGQTPGRY 255 G +P RY Sbjct: 251 FGVSPSRY 258 >UniRef50_Q2BLH8 Transcriptional Regulator, AraC family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLH8_9GAMM Length = 260 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 85/231 (36%), Positives = 130/231 (56%), Gaps = 1/231 (0%) Query: 31 LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLF 90 + H+H +GQL A G I + +W+VPP AVW+PG V H +AEL LF Sbjct: 30 VDMDPHRHPRGQLAYAAEGIIRVYTDEGVWVVPPSQAVWVPGDVVHRTTAEVSAELRHLF 89 Query: 91 IEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ 149 ++P+ ++ + C +++SPL RELI+ +A+ RL V+ DEL Sbjct: 90 VDPAYLSGLSDQCSVVEVSPLLRELIMRVADFGDDYSTNSPASRLCAVILDELQNLKPSL 149 Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209 LHLP ++ +++ ++ M + P L WA SER ++RL VKETG++F+QWR+Q Sbjct: 150 LHLPGATDRRLQRVMHAMVENPSAEIGLNYWAEQVGASERTISRLFVKETGMNFQQWRKQ 209 Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260 L L A+ L K + V +A LGY S +AF+ MF++ LG+ PG+Y L+ Sbjct: 210 LLLQEAVDRLGKRNAVVDIALELGYRSPSAFVAMFRQALGKPPGQYFKDLS 260 >UniRef50_Q14GY1 Transcriptional regulator araC family protein n=19 Tax=Francisella RepID=Q14GY1_FRAT1 Length = 282 Score = 249 bits (637), Expect = 5e-65, Method: Composition-based stats. Identities = 71/227 (31%), Positives = 113/227 (49%), Gaps = 1/227 (0%) Query: 32 TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91 S H HR+G++ G + + N W++P A WIP H +++ E +FI Sbjct: 44 ESDWHHHRRGKIFCIESGLVHVSTPNGSWVLPSNRAGWIPPNTSHKIRISGIVEGWVIFI 103 Query: 92 EPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150 P+ +P + + +S + R L L + +++ +E+ P++ L Sbjct: 104 HPNMCDDLPKSSRVIPMSEVLRALALRATEWDKYNNLSLEQEHIAKIICNEIRLAPEEAL 163 Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210 HLP+ ++ + + P +L QWA F AMS R L R + ETGLSF +WRQQ Sbjct: 164 HLPMPKTDRVIKVANAIIDNPSISKSLEQWAAFAAMSPRTLRRAFLSETGLSFSRWRQQA 223 Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 QL L L K +V +V+ +LGY S + FI MF+K G+TP +Y + Sbjct: 224 QLARGLDMLAKDISVTEVSDSLGYASPSNFIAMFRKAFGKTPKQYFS 270 >UniRef50_D1RUP3 Transcriptional regulatory protein n=2 Tax=Enterobacteriaceae RepID=D1RUP3_SEROD Length = 285 Score = 249 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 74/248 (29%), Positives = 125/248 (50%), Gaps = 4/248 (1%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 + D + +A P+H HR+ QL+ G + W+VPPQ AVW+ Sbjct: 32 DIDHVPRSVIAIGTDY-PSGHLLPMHSHRRAQLLYGATGVMHVFTHQGNWIVPPQRAVWL 90 Query: 71 PGGVEHSNQVTANAELCFLFIEPSA--VTMPTTCCTLKISPLCRELILTLANRTTTQRAE 128 P + H ++ L+IEP+A + P C + ++PL R+L++ + + Sbjct: 91 PPQMPHEVRMVG-VTTRSLYIEPTALLASQPQVCQVVSVTPLMRQLLMAAVDMPLEYDPD 149 Query: 129 PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSE 188 L+ +L EL Q LH+P+ + ++ + ++ P + +WA MS Sbjct: 150 GRDGALVFLLLHELAQLQSLPLHIPLPADRRLGELCQLFLLQPNAHDSPQEWATRLYMSI 209 Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGL 248 R +R +TG+SF QWRQ+ +++AL L +G++V +VA LGY+S+ AF TMF++ L Sbjct: 210 RTFSRFFRAQTGMSFSQWRQRACVVLALAQLTEGNSVTQVALELGYESSAAFATMFRRVL 269 Query: 249 GQTPGRYI 256 GQ P Y+ Sbjct: 270 GQAPSCYL 277 >UniRef50_A0AX10 Transcriptional regulator, AraC family n=6 Tax=Burkholderia RepID=A0AX10_BURCH Length = 277 Score = 249 bits (636), Expect = 8e-65, Method: Composition-based stats. Identities = 74/243 (30%), Positives = 121/243 (49%), Gaps = 1/243 (0%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 + +A + P H HR+GQLI A+ G + + W+VP AVW+PGG +H Sbjct: 34 DKQIAVVASDSPAGMAYPPHSHRQGQLIHAISGVMIVHADAGSWVVPTGRAVWVPGGTQH 93 Query: 77 SNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135 + + ++ +F+ P ++PT C +++ L RELI+T + R++ Sbjct: 94 EIRSAGDVQMRTVFVGPEVRPSLPTECRVIEVGTLLRELIVTACDLPADYDLSHRAGRVL 153 Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 ++ DE+ P LH+P+ HP + + + P L WA M+ER LAR Sbjct: 154 ALILDEIEIAPSLSLHVPMPRHPALVALCTRLINDPSSVVTLQAWARDAHMNERTLARAF 213 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 +ETG++ W + +L+++L L G + ++A GYDS +AF MF+K LG P Y Sbjct: 214 KRETGMTHGAWCRHARLLLSLPRLAAGTPILELALEHGYDSPSAFAAMFRKALGVAPSEY 273 Query: 256 IAR 258 R Sbjct: 274 FRR 276 >UniRef50_Q0B9P3 Transcriptional regulator, AraC family n=14 Tax=Proteobacteria RepID=Q0B9P3_BURCM Length = 322 Score = 249 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 76/249 (30%), Positives = 117/249 (46%), Gaps = 3/249 (1%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 +P H +V + T P H H +GQ A G I+ + + W+VPPQ A W+ Sbjct: 70 DPYDHIPRSVVVTANDYPAGTTFPEHAHGRGQFAFASRGTISVSTPHGRWLVPPQRACWV 129 Query: 71 PGGVEHSNQVTANAELCFLFIEPSAVT---MPTTCCTLKISPLCRELILTLANRTTTQRA 127 P GV H +T + F+ A +P C +SPL R+LI Sbjct: 130 PPGVRHEMTMTGAVTMLNTFVSDDAARAAGLPDQCGVYGVSPLLRQLIDDAIELPAMYDV 189 Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187 + +L+ +L E+ P+ LH P+ + ++ ++ + P L Q A +S Sbjct: 190 DGRAGKLMALLVAEIATMPRLSLHAPLPADARLASICRHLFASPSIAADLDQVATHAGVS 249 Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247 R RL +TG+SF WRQQ+ ++ A+ L G V +VA LGY S +AF + F++ Sbjct: 250 RRTFTRLFRAQTGVSFAAWRQQVCMLAAITRLSDGQPVTRVAFELGYASASAFTSAFRRI 309 Query: 248 LGQTPGRYI 256 LG TP RY+ Sbjct: 310 LGDTPSRYL 318 >UniRef50_B0UH11 Transcriptional regulator, AraC family n=3 Tax=Rhizobiales RepID=B0UH11_METS4 Length = 287 Score = 249 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 83/253 (32%), Positives = 128/253 (50%), Gaps = 5/253 (1%) Query: 6 NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65 + YE RH A+ +G P H H++ QLI A G + T + LW++PPQ Sbjct: 19 DPEDYEASRHGIVAMPKEFPSG---FHVPSHVHKRAQLIYATAGVMEVTTADGLWLLPPQ 75 Query: 66 YAVWIPGGVEHSNQVTANAELCFLFIEPSAVT--MPTTCCTLKISPLCRELILTLANRTT 123 AVW+P G+ H+ + + L L+I A P T ++++S L RELIL +A Sbjct: 76 RAVWMPAGIAHAMRARCDVSLRTLYIAQEACPASFPETPRSVRVSVLLRELILRVARMPL 135 Query: 124 TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183 + RR++ +L E+ + L+LP+ ++ + + + P + LG WA Sbjct: 136 EREPTEHERRVLDLLLYEITWEADGVLYLPMPKDKRLAGLCQALIDDPGDGRDLGDWARQ 195 Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITM 243 S R LARL +E G SF WR+QL+ + AL L G+ + VA LGY++ AF M Sbjct: 196 AGASSRTLARLFKREFGSSFLVWRKQLRALCALPRLAAGEPISVVAIDLGYETPGAFAAM 255 Query: 244 FKKGLGQTPGRYI 256 F+ +G+ P RY Sbjct: 256 FRGVMGERPSRYF 268 >UniRef50_Q11DK3 Transcriptional regulator, AraC family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11DK3_MESSB Length = 262 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 64/227 (28%), Positives = 112/227 (49%) Query: 30 ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89 P H H + QL +L G + E A +++PP A+WIP GV H N + Sbjct: 24 GYIDPFHSHERAQLSFSLSGVQSLITETATYVLPPNRAIWIPPGVRHKTHCRENVRFYAV 83 Query: 90 FIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ 149 +I+P+ +P C ++S L R LI + +++++L DE+P+ P Sbjct: 84 YIDPTLDNLPKECRVFEVSDLVRALIGEIMTFNFAYNEFGREGQIVRLLLDEIPRMPTVD 143 Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209 + +P+ + +I + M+ + P + + WA M R R+ K+TG++ WR Q Sbjct: 144 IQIPMPTDSRILRVCNMLIEQPGDAHDIDYWASVANMGRRTFTRVFKKQTGMALSTWRLQ 203 Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 ++L+ AL L G ++ VA+ +GY+S +AF ++F + G P Y Sbjct: 204 VRLMHALSLLHAGHSITSVAYGIGYESISAFTSVFHRSFGFPPSHYR 250 >UniRef50_A6W3J4 Helix-turn-helix-domain containing protein AraC type n=9 Tax=Gammaproteobacteria RepID=A6W3J4_MARMS Length = 273 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 97/245 (39%), Positives = 147/245 (60%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 D + + + +P H H+KGQL+L L G +T +++ +W+VPP+ AVWIP Sbjct: 22 ADHYPHRVLVLRSQSVPHSEETPWHHHQKGQLVLPLTGVVTSFIDDKMWLVPPRCAVWIP 81 Query: 72 GGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131 V H NQ++ NA++C LF++ + + +P CTL I+P RELIL L + ++ +P T Sbjct: 82 SNVMHRNQISPNADVCMLFVDSTNLALPEITCTLTITPFVRELILHLHTQQDYEKTDPAT 141 Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191 RL+ VL D+L Q +++ P+ P + + + P E LG+WA FAMSER L Sbjct: 142 GRLVDVLLDQLIQLEREEFDFPIPDEPTLNRLALELIARPNEKRTLGEWASDFAMSERTL 201 Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251 AR+I + L+F QWR QL +++ALQ L +Q ++ LGYDS +AFIT FKK LG++ Sbjct: 202 ARMIKRHVQLTFGQWRSQLHIVLALQKLAINLPIQTISEELGYDSVSAFITFFKKALGKS 261 Query: 252 PGRYI 256 P +Y Sbjct: 262 PRQYR 266 >UniRef50_A6W2J3 Transcriptional regulator, AraC family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W2J3_MARMS Length = 267 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 135/266 (50%), Gaps = 5/266 (1%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDE---LTSPVHQHRKGQLILALHGAITCTVENA 58 M ++ + D ++ V + E + +H+H GQL+ +L G ++ E+ Sbjct: 1 MAKMKKSLLLADIIDQSDVDLILSVELIENQIRETELHRHAFGQLVGSLEGLLSVQTESG 60 Query: 59 LWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILT 117 W+VP + VWIP H + ++++P + ++ T + +PL +EL+ Sbjct: 61 WWVVPATHTVWIPPNTLHGAKSHGPFRGWSVYLDPKRSQLLDSSPKTFQTTPLLKELVHR 120 Query: 118 LANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGAL 177 A+ + ++ + RL +VLFDE+ P+ L P ++ M + + + +L Sbjct: 121 AASWS-DDTSQAVKSRLSEVLFDEIVNLPETLFGLLQPGLPSLKKMTDGLLSNLADNRSL 179 Query: 178 GQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDST 237 +WA +S R LAR ++TGL F +WRQ+ +++ A++ L V +A TLGY++ Sbjct: 180 EEWARSIGLSSRTLARRFNEQTGLGFSEWRQRARVLSAIEMLADNVPVTNIAFTLGYENV 239 Query: 238 TAFITMFKKGLGQTPGRYIARLTTVS 263 +AFI MF++ +G TPG+YI R S Sbjct: 240 SAFIAMFRRVMGVTPGQYIQRHNKES 265 >UniRef50_A9HXG4 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria RepID=A9HXG4_BORPD Length = 284 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 72/247 (29%), Positives = 113/247 (45%), Gaps = 1/247 (0%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 E +H V T+ H H +GQL+ A+ G + + + W +P A+W+ Sbjct: 34 EDYQHVPRLVTALAKDFVPSETTGPHSHPRGQLVYAIEGVMRVSTPDGFWTLPSLRALWV 93 Query: 71 PGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129 P G H Q+ + L++ +A ++ C +++S L RELIL L E Sbjct: 94 PPGTVHGIQMVGKVSMRTLYVHANAANSLWDRCQVVEVSGLLRELILALTAEPIEYALEG 153 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 ++ +L EL P + +P +++T+ + P + W S R Sbjct: 154 RGGQIATLLLTELKAAPVIPIRIPWPQDRRLQTVCRAILAQPGLARTVDDWGDEVGASGR 213 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 L RL E GL++RQW QQ++L AL L G V +VA LGY S +AF MF++ LG Sbjct: 214 TLIRLFQAEVGLNYRQWVQQVRLAEALHRLSLGQPVARVAAELGYRSPSAFSAMFRRALG 273 Query: 250 QTPGRYI 256 P Y+ Sbjct: 274 SPPQAYL 280 >UniRef50_Q4K821 Transcriptional regulator, AraC family n=22 Tax=Bacteria RepID=Q4K821_PSEF5 Length = 274 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 3/255 (1%) Query: 13 DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72 D+ +A D P H+HR+ QL+ G + + + W+VPPQ AVWIP Sbjct: 21 DQTPRPVLAIGTDY-PDGQRLPRHRHRRAQLLYGATGVMQVSTDQGNWVVPPQRAVWIPP 79 Query: 73 GVEHSNQVTANAELCFLFIEPSAVTMPTT-CCTLKISPLCRELILTLANRTTTQRAEPMT 131 GVEH + L+IEP+A + ++ C + ISPL R+L+L + + Sbjct: 80 GVEHEVLMLG-VSTRSLYIEPAAAPLDSSGCRVIGISPLLRQLLLEAVDMPLEYDLDGRD 138 Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191 LI +L E+ + P LH+P+ + + + P + WA +S R Sbjct: 139 GLLINLLLHEIQRCPGLPLHIPLPAGGPLLELCRAFLARPDVHQSPLHWADRLHVSLRTF 198 Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251 R +ET +SF QWRQ+ +I AL L + V ++A LGYDS AF TMF++ LGQ+ Sbjct: 199 NRWFRQETDMSFVQWRQRACVIQALARLAAAEPVTRIALDLGYDSPGAFSTMFRRVLGQS 258 Query: 252 PGRYIARLTTVSPQS 266 P Y+ + ++ Sbjct: 259 PSTYLNQEHPAPGKA 273 >UniRef50_B0VLM5 Putative transcriptional regulator (AraC family) n=1 Tax=Acinetobacter baumannii SDF RepID=B0VLM5_ACIBS Length = 275 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 123/260 (47%), Gaps = 4/260 (1%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 +M ++N ++ H A + +HQH +GQLI A G + + E LW Sbjct: 7 VMIEKSINPHDYQHIHSPASVMPKNYHAKHRI-DLHQHERGQLIYATSGIMELSTEEELW 65 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP--SAVTMPTTCCTLKISPLCRELILTL 118 ++PP++ VWIP H + L L+I+ + P C + +S L EL++ Sbjct: 66 LIPPRFGVWIPAYTPHQMTTKTDVHLNTLYIDTYRWSKPFPDKPCGVTVSGLLHELLIRA 125 Query: 119 ANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVS-SHPKIRTMVEMMAKGPVEWGAL 177 A+ + + + +L +EL L P +++ + ++ P + +L Sbjct: 126 ASFPIEYPLHSVEWKTMDLLVEELKWTKGISLMTPEPYMDKRLQDLCNILIINPADNHSL 185 Query: 178 GQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDST 237 +W+ + R L+RL +E +F WRQQL+++ A+ L+ G + ++ LGY S Sbjct: 186 EEWSSQVGATTRTLSRLFKQEMNTTFTLWRQQLRIVHAIPSLMAGKPISDISQELGYSSQ 245 Query: 238 TAFITMFKKGLGQTPGRYIA 257 + F MFKK +G+TP YIA Sbjct: 246 STFTVMFKKIMGKTPTEYIA 265 >UniRef50_Q39GD4 Transcriptional regulator, AraC family n=7 Tax=Betaproteobacteria RepID=Q39GD4_BURS3 Length = 278 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 74/233 (31%), Positives = 112/233 (48%), Gaps = 1/233 (0%) Query: 31 LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLF 90 H H +GQ+ G + W++PP A WIP G +H ++ + Sbjct: 46 REVDWHSHLRGQVFCVESGFAHVRTPHGSWLLPPHRAGWIPPGEQHKVSISGALSGWSVV 105 Query: 91 IEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ 149 I P+A MP C + I+ L R L+ + R + R+ VL DE+ + P + Sbjct: 106 IAPAASRRMPDQPCVIAITELMRALVRRAVSWADQDRLDIEQARISIVLLDEMRRAPHEP 165 Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209 LHLP+ ++ + + P + L WA + +S R L+RL V ETG SF QWRQQ Sbjct: 166 LHLPMPRDRRLLRIANAILGQPHDSRTLEAWAEWAGLSARTLSRLFVAETGTSFAQWRQQ 225 Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262 +L AL+ L GD+V +A LGY + + FI MF++ G +P Y A+ Sbjct: 226 ARLTHALERLASGDSVANIADALGYATPSNFIAMFRRAFGDSPAHYFAKRKQP 278 >UniRef50_B4SSQ8 Transcriptional regulator, AraC family n=3 Tax=Stenotrophomonas RepID=B4SSQ8_STRM5 Length = 265 Score = 247 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 78/244 (31%), Positives = 122/244 (50%), Gaps = 2/244 (0%) Query: 15 HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGV 74 H SP H+HR+ QL+ A G + E W+VP A+W+P G+ Sbjct: 23 IQRPVTCRARHYQAGTHISP-HKHRRHQLVYAQSGLMVVRSEVGRWVVPSTRAIWVPAGI 81 Query: 75 EHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRR 133 H+ A + L++EP A +P ++++PL REL+L + + R Sbjct: 82 AHAVDCIAEVHMRSLYVEPEFAPHLPAEAFAIQVAPLLRELLLAASLIEGAHEDDSRDGR 141 Query: 134 LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193 ++++L DEL + LHLP S P++ + + K P + L WA + + + R Sbjct: 142 VVRLLLDELRRMDALPLHLPEPSDPRLLKICLHIQKHPADDATLQDWAQALQVDVKTIQR 201 Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253 E G++F QWRQQ +L+ A++ L GD V VA +GYDS +AF +MFK+ LGQTP Sbjct: 202 HFTSELGMTFGQWRQQARLLAAMERLAVGDKVIDVALAMGYDSPSAFTSMFKRQLGQTPA 261 Query: 254 RYIA 257 + Sbjct: 262 AFFR 265 >UniRef50_A1K8N6 Putative AraC-family transcriptional regulator n=1 Tax=Azoarcus sp. BH72 RepID=A1K8N6_AZOSB Length = 261 Score = 244 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 4/247 (1%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 P + ++ + + P H H GQL + GA+ V + W+VPP A+W+P Sbjct: 12 PQPTTQDPISVLVREPPPDSIIPWHSHPWGQLAYPVSGAVCMDVPGSRWLVPPFRALWVP 71 Query: 72 GGVEHSNQVTANAELCFLFIEPSAVTMPT-TCCTLKISPLCRELILTLANRTTTQRAEPM 130 GVEH + + L + + +P C L+I+PL RELI L R Sbjct: 72 PGVEHQQSMLGHVRLRVVHVAEGCAALPESHCAVLEITPLLRELIEALLPRPP---QSER 128 Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190 ++ +L EL Q L LP S ++ + E + P + L +WA S R Sbjct: 129 RTQIQALLLTELSQARTLNLRLPQPSDRRLAALCEALMADPADNAPLTEWARRVGASGRT 188 Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250 LARL E G+SF WRQQ++L A + +G ++A LGY S +AF MF++ G Sbjct: 189 LARLFQSEMGMSFGLWRQQVRLTHATVLVAQGRPYAEIAAELGYASPSAFSAMFRRAFGC 248 Query: 251 TPGRYIA 257 +P + A Sbjct: 249 SPRAFYA 255 >UniRef50_Q8L1B2 Transcriptional factor PhcT (Fragment) n=1 Tax=Comamonas testosteroni RepID=Q8L1B2_COMTE Length = 246 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 71/235 (30%), Positives = 120/235 (51%), Gaps = 2/235 (0%) Query: 13 DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72 D V +++ H H KGQL+ A G + + W+VPP A+WI Sbjct: 13 DSLAWPVVVMESRW-PVGMSTGWHSHPKGQLLYATEGVMVVHTDAGSWIVPPNRALWITT 71 Query: 73 GVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131 G+ H+ + + + +I+ + VT +P + +SPL REL++ + Sbjct: 72 GLRHTVTMAGDVLMRTAYIDAAKVTTLPHESSVINVSPLLRELLVEAVRIAFHTEPKGRD 131 Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191 RL+++L DE+ LHLP+ ++R++ + ++ P + +WA + ER L Sbjct: 132 ARLLELLIDEIRVSTTLPLHLPMPKDGRLRSICDQLSATPSDSSNAAEWAASIHVGERTL 191 Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKK 246 RL KETG++F QWR+Q +L+ AL+G+ G+ V +VA GY S +AF MF++ Sbjct: 192 HRLFAKETGMTFAQWREQARLLHALRGIAAGNKVIEVALDCGYGSASAFAAMFRR 246 >UniRef50_D1SXH7 Transcriptional regulator, AraC family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SXH7_9BURK Length = 269 Score = 244 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 80/265 (30%), Positives = 130/265 (49%), Gaps = 2/265 (0%) Query: 5 LNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPP 64 + + + H HR+GQLI G ++ + W++P Sbjct: 3 DTAAWIDLHDDDTGPLVVGRAGTQVNHDTAPHSHRRGQLIGCRRGVLSVGADTGHWVIPA 62 Query: 65 QYAVWIPGGVEHSNQVTANAELCFLFIE-PSAVTMPTTCCTLKISPLCRELILTLANRTT 123 ++A+W+P G HS+++ L++ P+ ++P + CT+ +SPL E L A R Sbjct: 63 RHAIWLPPGRPHSSRMHGPFTGWSLYVAGPACQSLPDSPCTVAVSPLLWEAALRCAER-A 121 Query: 124 TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183 +P+ RL V+ DEL + L LP+ S ++ + + P +L WAG+ Sbjct: 122 NALPDPVQDRLAGVILDELRSMVPRPLGLPMPSDARLLRIARGLLADPARRQSLQAWAGW 181 Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITM 243 A+S R L+R V ET LSF W Q+++L+ +L+ L G +V +VA LGYDS +AFI + Sbjct: 182 AALSPRTLSRRFVAETSLSFTAWTQRVRLLRSLEWLADGQSVTQVALDLGYDSVSAFIAL 241 Query: 244 FKKGLGQTPGRYIARLTTVSPQSAK 268 FK+ LG+TP Y R + Sbjct: 242 FKRELGRTPAAYFGRQAPADRRMPS 266 >UniRef50_D0J513 Pyridoxamine 5'-phosphate oxidase-related protein n=2 Tax=Comamonas testosteroni RepID=D0J513_COMTE Length = 265 Score = 243 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 78/265 (29%), Positives = 140/265 (52%), Gaps = 6/265 (2%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 +MH L PD +V EL+S +HQH +GQL ++ G I+ V+ LW Sbjct: 4 LMHLLGSYMDSPD---GPSVVAATRMLESELSSEMHQHARGQLFGSIKGLISVQVDGGLW 60 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLA 119 +VP +AVW+P H+ + ++ E + +P C +++S L RE +L +A Sbjct: 61 VVPAIHAVWLPPHHAHAGRSFGPYHGWSAYVAEAACANLPAQPCIIRVSGLLREAVLRIA 120 Query: 120 --NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGAL 177 + ++ + V+ DE+ P ++ LP+ + +++ + + + P + + Sbjct: 121 SSMPQASDQSSQAQSHICAVVLDEIRSLPVEEFGLPIPADARLQRIAKALIANPADERNI 180 Query: 178 GQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDST 237 WA F A+S R L+R V ETG +F WRQ+++L+ +L+ L +G ++ +A LGY S Sbjct: 181 DDWASFGAISSRTLSRRFVSETGFNFTAWRQRVRLLRSLEMLAEGISITAIALDLGYASI 240 Query: 238 TAFITMFKKGLGQTPGRYIARLTTV 262 +A+I++F++ G+TP Y +RL V Sbjct: 241 SAYISLFRRTFGETPACYRSRLKAV 265 >UniRef50_D0B292 Transcriptional regulator n=40 Tax=Rhizobiales RepID=D0B292_BRUME Length = 289 Score = 243 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 79/257 (30%), Positives = 125/257 (48%), Gaps = 2/257 (0%) Query: 13 DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72 + A+A D P H H + QL+ A G + T + WM+P +A+WIP Sbjct: 29 ESMTGPAIALPTRY-PDGYFVPRHSHSRAQLLCASQGVVLVTTDAGRWMIPSDHAMWIPA 87 Query: 73 GVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131 GVEHS + + + ++I A++ +P + ++ L R LI+ + + E Sbjct: 88 GVEHSVAILGDVFMRSIYISVDAISGVPNYLHVVGLTDLMRCLIIDATSHDSIPAPESRD 147 Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191 +I+++ +L P+ L LP S P+++ + K P + +WA AMS R+ Sbjct: 148 GLVIELILRDLHTLPEYPLGLPFPSDPRLQKLCRDFVKKPSSRATIDEWADRMAMSRRSF 207 Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251 R +ETG+S WRQQ L A+ L +G+ V VA LGYDS +AF TMF++ LG Sbjct: 208 TRHFQRETGVSLSVWRQQACLFAAVPRLSEGEPVTSVALDLGYDSVSAFTTMFRRMLGVP 267 Query: 252 PGRYIARLTTVSPQSAK 268 P Y RL + + Sbjct: 268 PKFYQPRLDVAPFERSD 284 >UniRef50_Q47EU9 Transcriptional regulator, AraC family n=4 Tax=Bacteria RepID=Q47EU9_DECAR Length = 273 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 78/245 (31%), Positives = 114/245 (46%), Gaps = 2/245 (0%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 E+ P H+H QL L G I + W+VP AVWIP +EH + E Sbjct: 29 PAEVYVPPHRHDWAQLAYPLRGGIRISAAGMTWLVPALRAVWIPPHIEHDLLMLGEVEFR 88 Query: 88 FLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTT-QRAEPMTRRLIQVLFDELPQQ 145 ++I P +P C +++S L R L L+ Q R++ +L E+ + Sbjct: 89 TVYIAPEVAPLPLDACSVIEVSDLMRALFEALSEADGDGQEPSLRQRQVTALLLTEIRRA 148 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 P L LP+ +++ + + + P +L +WA SER LARL V E LSF Sbjct: 149 PPLSLGLPMPHDRRLQALCQALIDEPASPLSLAEWAARVGASERTLARLFVSELKLSFGA 208 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ 265 WRQQL+L AL + +G +VA LGY S AF MFK+ G PGR++ + + Sbjct: 209 WRQQLRLARALDLIGRGRPCGEVAAELGYASPAAFSAMFKRAFGVPPGRFMQERSPLPAG 268 Query: 266 SAKPD 270 D Sbjct: 269 EPHND 273 >UniRef50_Q4ZYQ3 Helix-turn-helix, AraC type:Arac protein, arabinose-binding/dimerisation n=22 Tax=Proteobacteria RepID=Q4ZYQ3_PSEU2 Length = 267 Score = 242 bits (618), Expect = 9e-63, Method: Composition-based stats. Identities = 80/228 (35%), Positives = 116/228 (50%), Gaps = 2/228 (0%) Query: 32 TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91 +P H+H Q A+ G + + PPQ+ VW+P G+EH + AE+ L+I Sbjct: 40 WTPPHRHDWVQFSYAISGVLGVHTAEGSFFAPPQWGVWVPAGLEHEVVTSMRAEMRSLYI 99 Query: 92 E-PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRA-EPMTRRLIQVLFDELPQQPQQQ 149 + P C L+++PL RELI + + RL+QVL D+L Q P+ Sbjct: 100 RTADSGWAPQRCRVLEVTPLARELIKSFCLLPVDYPEQDSHEARLVQVLLDQLAQLPEVG 159 Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209 LP+ HP++ + + + P L WA SE+ L RL +ETGLSFR WRQ+ Sbjct: 160 FSLPLPRHPRLLGLCNELIEEPGRLITLHDWAARLGTSEKTLMRLFQRETGLSFRGWRQR 219 Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 +L+ +L L +G +V + A GYDST+AFI FK G TPG Sbjct: 220 ARLLSSLSALEEGASVTRTALACGYDSTSAFIAAFKGLFGHTPGDLFK 267 >UniRef50_Q7W072 Probable transcriptional regulator n=3 Tax=Bordetella RepID=Q7W072_BORPE Length = 286 Score = 242 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 79/250 (31%), Positives = 128/250 (51%), Gaps = 5/250 (2%) Query: 18 AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77 AA+A AGT S +H+H +GQL+ A+ G +T + W+V P A+WI GV H Sbjct: 40 AALATDYPAGT---VSSLHRHDRGQLLYAMSGVVTVITDLGSWVVAPGQALWIAPGVLHQ 96 Query: 78 NQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136 + + + L+I+P+ +P C T+++SPL + LIL + Sbjct: 97 TRGFESVAIRSLYIDPAHADGLPAACQTIQVSPLLQALILEAVKLPPQDAGSERAGHIRA 156 Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196 ++ DE+ L++P+ ++ + + + + P G+L WA + +S RNL RL Sbjct: 157 LILDEMRHVCAAPLYVPMPRDARLARICQALLRDPANAGSLDAWAAYGGLSRRNLTRLFR 216 Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 +TG SF WRQ++ L+ AL L +G+ + VA LGY S AF MF++ LG +P Y Sbjct: 217 AQTGASFNAWRQKVLLMEALARLSRGEQITAVALDLGYGSPGAFTAMFRRALGVSPREYF 276 Query: 257 ARLTTVSPQS 266 R T ++ Sbjct: 277 -RWTEAPQRA 285 >UniRef50_C1DH76 Transcriptional regulator, AraC-family n=3 Tax=Proteobacteria RepID=C1DH76_AZOVD Length = 296 Score = 242 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 80/254 (31%), Positives = 122/254 (48%), Gaps = 3/254 (1%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 +PDR VA + P H HR+GQL+ G + W +PP A W+ Sbjct: 29 DPDRSSLPVVAERYGYPKGQRI-PEHSHRRGQLMFVTSGGLRVQTRRGYWTIPPGRACWV 87 Query: 71 PGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEP 129 P G+ H + AEL ++ +P+ C L + L REL++ + + Sbjct: 88 PCGLNHIAEYPQAAELAVAYVRTDLCEMLPSDCRVLNLGALLRELVIAAYDFGWDYGIDS 147 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 R + VL E+ +Q L +P ++R + + + P + +L +WA S R Sbjct: 148 HEARAMLVLIGEIGRQSSAPLFIPEGRDNRLRRVTAFLHRHPDDKRSLEEWASQVGASAR 207 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 LARL ETGLSF QWRQQL L A++ L++G +V +VA+ LGY S +F MF + +G Sbjct: 208 TLARLFRSETGLSFSQWRQQLHLTRAVEMLLEGASVTQVAYALGYASPGSFSAMFARSMG 267 Query: 250 QTPGRY-IARLTTV 262 + P Y AR + Sbjct: 268 EPPSLYCRARHGAL 281 >UniRef50_Q15UL1 Transcriptional regulator, AraC family n=3 Tax=Alteromonadales RepID=Q15UL1_PSEA6 Length = 263 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 113/257 (43%), Positives = 157/257 (61%), Gaps = 3/257 (1%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 + +L +E + VA I + P+H H KGQLILALHG +TC V+ +WM Sbjct: 7 IQWDDLQQFE--VMPQPVVA-RIEKVNNSHELPLHTHSKGQLILALHGHVTCEVQGKMWM 63 Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANR 121 VP Q A+WIP HSN+ + +AELC +FI+P + MP CT +S L +ELI A + Sbjct: 64 VPTQSAIWIPTHTLHSNRASDHAELCHVFIQPGELRMPDKTCTFALSVLAKELICHFAKQ 123 Query: 122 TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWA 181 T RL QVL D + + PQQ ++LP+ SHP + + + + P + L QWA Sbjct: 124 DQHYPHFSPTNRLAQVLIDVVSESPQQPMNLPLPSHPTVAKLAQQLLSYPDDKKTLPQWA 183 Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241 +FAMSER LARLI +ETG++F WR Q+ +I+A+Q L+ TVQ+V+ LGY S +AFI Sbjct: 184 SYFAMSERTLARLIKRETGMTFGHWRAQMHVIIAVQKLMTNMTVQRVSEYLGYSSVSAFI 243 Query: 242 TMFKKGLGQTPGRYIAR 258 TMFK LG++P RYI + Sbjct: 244 TMFKNILGESPKRYIKQ 260 >UniRef50_Q2RRF5 Transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria RepID=Q2RRF5_RHORT Length = 247 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 112/226 (49%), Gaps = 3/226 (1%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE-- 92 H H QL+ A+ G W+VPP AVW+P G+ H + + +++ Sbjct: 22 PHSHPWCQLVYAIGGVTIVETPEGSWVVPPDRAVWVPAGITHCVRAARGGQNRSVYVTIE 81 Query: 93 -PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151 A +P C + +SPL RELIL R + RL++VL D++ P Q LH Sbjct: 82 AAQAAGLPKGCKVVAVSPLTRELILEFGRRPDDYDEDGADGRLVRVLLDQIAALPAQPLH 141 Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211 LP P+ + + P + L +WA S R LAR + GL+F QWR +L+ Sbjct: 142 LPWPRDPRALAVARALEADPADGRPLEEWAREAGASARTLARTFRADCGLTFGQWRLRLR 201 Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 L+ AL+ L G+ V VA +GYD +AFI MF++ LG TPG Y Sbjct: 202 LLGALERLAAGEAVTAVAFDMGYDQPSAFIAMFRRLLGTTPGAYFR 247 >UniRef50_A4WDQ0 Transcriptional regulator, AraC family n=18 Tax=Gammaproteobacteria RepID=A4WDQ0_ENT38 Length = 254 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 122/242 (50%), Gaps = 1/242 (0%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 + + H + P HQH QL+ +L G + W+VPP VW+P G +H Sbjct: 11 QRPLVPYAHDYRHGDSEPYHQHDCAQLLHSLSGVVRVDTVAGCWVVPPGRGVWLPAGTQH 70 Query: 77 SNQVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135 + ++T N LFI+P A +P +C ++ISPL RELI+ + + R+ Sbjct: 71 AIRITGNVAARTLFIDPLARADLPASCQIVQISPLLRELIVASLDLPESYSPGSRDERVY 130 Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 +++ DE+ P HLP + + + + + P + Q A +MSER L R Sbjct: 131 ELILDEIRTMPVLPFHLPEPQSEPLHQLCQQIRQDPGLAWSSAQAASLTSMSERTLNRHF 190 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 ++TGLS+ +W ++ +L+ AL L +G V +VA LGY S +AF MF++ +G +P Y Sbjct: 191 QQQTGLSYGEWTRRARLVEALLRLAQGQPVLRVALDLGYGSHSAFTAMFRRVMGISPSDY 250 Query: 256 IA 257 Sbjct: 251 FK 252 >UniRef50_C3K8M6 Putative AraC-family regulatory protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K8M6_PSEFS Length = 265 Score = 241 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 126/266 (47%), Gaps = 6/266 (2%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 M + Y+PD +GT P H HR+GQ A GA+ + W Sbjct: 1 MPPTFTFSPYKPDSPEAVVTLREYPSGT---VFPRHTHRRGQFAYASTGALKMFTDLGNW 57 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT---MPTTCCTLKISPLCRELILT 117 +VPPQ A+W+PGGV H + + + +++ +A + C +SPL R L+ Sbjct: 58 VVPPQRAIWVPGGVSHEMHMRGDVVMLNTYLDDAAARRAGLQDYCQVFGVSPLLRHLLEA 117 Query: 118 LANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGAL 177 + ++ +L DE+ P+ L P+ S ++ + P + ++ Sbjct: 118 ALAIGPSASPSVRDCCVLTLLIDEIGTMPELPLSAPLPSESRLARSCQRFLDAPTQKISI 177 Query: 178 GQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDST 237 G+ A + +MS R R + TG++F WRQQ+ L+ A L G ++ VA LG+ S+ Sbjct: 178 GEMADWSSMSRRTFTRNFRECTGMTFVSWRQQVCLLEATARLSHGSSITDVAFELGFSSS 237 Query: 238 TAFITMFKKGLGQTPGRYIARLTTVS 263 +AF ++F++ LG +P RY+A+ S Sbjct: 238 SAFTSVFRRNLGDSPARYLAKSKAAS 263 >UniRef50_A6WQB9 Helix-turn-helix-domain containing protein AraC type n=4 Tax=Shewanella baltica RepID=A6WQB9_SHEB8 Length = 305 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 70/237 (29%), Positives = 114/237 (48%), Gaps = 7/237 (2%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 H H GQ+I A G ++ ++VPP+ AVW+P V+H +L L+++ + Sbjct: 54 RHSHPWGQVIYASQGVLSVITPAGRYIVPPEQAVWVPPFVDHEVIALGQVQLSSLYLDET 113 Query: 95 AVT-MPTTCCTLKISPLCRELILTLANRT------TTQRAEPMTRRLIQVLFDELPQQPQ 147 + P C L + P+ + L+ + RL+ V+ D + P+ Sbjct: 114 QIGGFPPDCTCLSVKPVLQLLLQEANALMKSEAGLIEPDDKDSVMRLLMVIRDFMVLAPK 173 Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207 L LP K+ + E + P E L W S R LARL ++TGLS+ QW Sbjct: 174 VALDLPYPKDKKLLRITEALLADPSEQRTLVDWQREVGASARTLARLFKQQTGLSYSQWL 233 Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSP 264 Q+L+L +A+Q L +G++V A +LGY S +AF MF++ +G P +Y+ T+ Sbjct: 234 QRLRLQVAIQMLSRGESVLTTALSLGYASGSAFGYMFRQLMGVAPSQYLLAQNTMPK 290 >UniRef50_Q2SEK4 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SEK4_HAHCH Length = 255 Score = 239 bits (610), Expect = 7e-62, Method: Composition-based stats. Identities = 76/243 (31%), Positives = 113/243 (46%), Gaps = 2/243 (0%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 + + + + E H H GQL L G + W++P WIP GV Sbjct: 14 PQDILVRRLRSEGTE-EREGHSHEHGQLFCVLQGLTVVDTDAGRWLMPSNRLGWIPPGVR 72 Query: 76 HSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134 H Q L++ P +P C + + L +I +A T + + RRL Sbjct: 73 HGAQYFGAIAGWSLYLHPDICEPLPDEPCVYEANALMTPVIARIAEWTAGEPLDAPRRRL 132 Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 + VL DE+ Q LHLP+ ++ + + P +L A +SER L R Sbjct: 133 LHVLMDEIQAAQQPALHLPMPRDQRLLRLSHKLLATPENNDSLLALASDIGLSERTLTRK 192 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 +ETGLS QWRQ +L AL+ L +G +V + A LGYDS +AFI +F++ G+TPGR Sbjct: 193 FREETGLSLGQWRQLARLARALELLAQGVSVTQTALDLGYDSVSAFIALFRRYFGETPGR 252 Query: 255 YIA 257 Y+ Sbjct: 253 YLK 255 >UniRef50_Q221Z0 Transcriptional regulator, AraC family n=9 Tax=Proteobacteria RepID=Q221Z0_RHOFD Length = 273 Score = 239 bits (610), Expect = 7e-62, Method: Composition-based stats. Identities = 77/242 (31%), Positives = 122/242 (50%), Gaps = 1/242 (0%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 A + F E P H+H G+ + + G + + + ++ PPQY +W+P VEH Sbjct: 21 PAPIVFRSAYVPAEGMYPQHRHAWGEFVYSFSGVMEVKLADHHYLAPPQYGIWLPPDVEH 80 Query: 77 SNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135 A C L+I P +P C L +SPL R L+ L + Q RL+ Sbjct: 81 VGLNRYEAVHCSLYIAPQGCGNLPRAACALTVSPLVRALLEHLRQQPPEQPGTLQDERLL 140 Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 +VL D+L P +LP S + ++ M+ + P + +L + A +ER L R Sbjct: 141 RVLVDQLALAPCAGSYLPSSDDALLGAVLRMLEEQPGDNRSLPELAHAVHTTERTLMRRA 200 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 ++ G+SF +WRQ+L+++ A+ L G TV+ +A LGY S +AFITMFK+ +G TP + Sbjct: 201 RRDLGMSFVEWRQRLRVVKAMPLLEAGQTVETIALDLGYGSASAFITMFKRLVGTTPDEF 260 Query: 256 IA 257 Sbjct: 261 RK 262 >UniRef50_Q4K6D5 Transcriptional regulator, AraC family n=8 Tax=Pseudomonas RepID=Q4K6D5_PSEF5 Length = 272 Score = 239 bits (609), Expect = 9e-62, Method: Composition-based stats. Identities = 83/257 (32%), Positives = 127/257 (49%), Gaps = 5/257 (1%) Query: 13 DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72 D H V+ D P+H+HR+ Q + A G + W++PP AVWIP Sbjct: 19 DHFHHGPVSAYPRDYPDAAHQPLHRHREAQFLYAACGTMRLVTAQGAWVIPPSRAVWIPP 78 Query: 73 GVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131 VEH + + LFI+P + CC L ++PL RELIL + Q P+ Sbjct: 79 LVEHEIFMVGEVRMRSLFIDPELSAPALRQCCVLAVTPLLRELILRAV-QGPEQAENPLI 137 Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191 ++L+ +E+ LH+P+ +++ + + + P L WA S R L Sbjct: 138 QQLM---LEEIAALENLPLHIPMPQDRRLQAICRTLIQTPDHPHTLEDWAQQVGASSRTL 194 Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251 ARL ++ ++F WRQQ++L+ AL L+ G++V VA +LGY S AF MF + LG T Sbjct: 195 ARLFQQQVQMNFNAWRQQVRLMEALPRLLAGESVHNVADSLGYGSARAFSAMFCRLLGDT 254 Query: 252 PGRYIARLTTVSPQSAK 268 P Y+A L +S +A Sbjct: 255 PRHYVAALNQLSAINAS 271 >UniRef50_Q47Y50 Transcriptional regulator, araC family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y50_COLP3 Length = 268 Score = 239 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 64/223 (28%), Positives = 112/223 (50%), Gaps = 1/223 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H QL + G + + ++++PP+ A+W+P G+ H + L+ +P Sbjct: 45 HSHPWSQLSYSCVGVMHIETDAGIFVIPPEQALWLPPGMAHQHFCKNKVSYRSLYFDPVL 104 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 + L + PL + LIL ++N + T+R + VL D L +L +P Sbjct: 105 SEMLGDKVRPLTVDPLLKSLILEISNWSEDYEETEETQRFLLVLLDRLAIAKSNELFMPT 164 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 ++ ++E + + P + QWA S R L RL + G+ F +W+Q+L+++ Sbjct: 165 IQDKRLFPIIETLNQEPANKLTIEQWALKVGASSRTLNRLFNQNYGMGFSRWKQKLRILK 224 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 +L+ L + +A LGY+ST+AFIT FKK LG +P +Y+A Sbjct: 225 SLELLNSNARLVDIAFELGYESTSAFITAFKKQLGCSPKKYLA 267 >UniRef50_B3RAF2 Putative Transcriptional Regulator, AraC family n=1 Tax=Cupriavidus taiwanensis RepID=B3RAF2_CUPTR Length = 265 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 76/232 (32%), Positives = 121/232 (52%), Gaps = 1/232 (0%) Query: 24 IHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTAN 83 I A + + H+H Q AL G + + ++ PPQ+AVWIP GV H + Sbjct: 22 IEALPNRVLGYRHRHPWCQFAYALQGVLEVWTDRGRFVAPPQWAVWIPAGVAHRVRCATG 81 Query: 84 AELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDEL 142 + L+++ S + C L +SPL RELI ++ RL +VL D+L Sbjct: 82 TRIRSLYLDNSVCAAARSRCRVLTVSPLLRELIRAFSHLPAEYDERGADGRLARVLLDQL 141 Query: 143 PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202 P+ + LP+ + P++R + + + +L W+ A+S + L RL V+ETGL+ Sbjct: 142 GAAPEVEFMLPLPADPRVRLVCNGLQRHADRDTSLAAWSMRLAISGKTLTRLFVRETGLT 201 Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 FR WRQ+L+L+ A+ L +G+ V +VA GY+S +AFI F++ TPG Sbjct: 202 FRAWRQRLRLLDAVPRLERGEAVTEVALDCGYESLSAFIAAFRRLYNMTPGE 253 >UniRef50_A7K1S8 Transcriptional regulator AraC family protein n=4 Tax=Vibrionaceae RepID=A7K1S8_VIBSE Length = 264 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 69/224 (30%), Positives = 116/224 (51%), Gaps = 1/224 (0%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 H H +GQL+ G I + W++PP A WIP G HS + + L P Sbjct: 37 WHSHHRGQLLCIDEGLIQVKTDEGAWILPPHRAGWIPPGAMHSVYFCGSLKGRSLLFTPE 96 Query: 95 AV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153 + P C +++S + + L + + + T + R++ V+ DE+ P + LH+P Sbjct: 97 SCERFPMRPCVIQMSDVLKALSVRASIWSKTDELSIQSLRILAVISDEIVNSPHESLHIP 156 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 + P+++ + + + P ++ WA A+S R L RLI E +SF +WRQQ LI Sbjct: 157 LPRDPRLQKVTQAILIDPNSKHSVEHWAKIGAVSSRTLRRLIRSELNMSFSEWRQQALLI 216 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 +L+ + +G++V VAH LGY + + FI MF++ G +P RY + Sbjct: 217 HSLEMMARGESVGAVAHALGYSTPSNFIAMFRRVYGDSPTRYFS 260 >UniRef50_B3QB90 Transcriptional regulator, AraC family n=3 Tax=Alphaproteobacteria RepID=B3QB90_RHOPT Length = 248 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 80/235 (34%), Positives = 122/235 (51%), Gaps = 1/235 (0%) Query: 23 CIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTA 82 + S H H + QLI A+ G ++ T + W+VPP AVW+P GVEH + + Sbjct: 12 VVSQDAHRFASRRHSHPQAQLIYAITGVVSVTTADGTWVVPPSRAVWVPAGVEHDTKSHS 71 Query: 83 NAELCFLFIE-PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDE 141 + L I+ + +P C ++++PL RELIL L ++R + Q+L E Sbjct: 72 AVQFRSLLIDSVEVMGLPVVCMAMEVTPLLRELILRLVAIADAPGRVELSRVVTQLLLME 131 Query: 142 LPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGL 201 L P + L LP HP++ + + P +L Q A MS + RL ETG+ Sbjct: 132 LASLPVEPLSLPTPRHPQLARFCDQIRGEPAASVSLEQAARALHMSRASFMRLFQHETGM 191 Query: 202 SFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 SF +WRQQ +L+ AL L +G ++ VA GYDS +AF MF++ LG++P +Y Sbjct: 192 SFLRWRQQARLLHALSLLAEGQSILNVALACGYDSPSAFSAMFRRVLGKSPSQYF 246 >UniRef50_Q0KFJ5 Transcriptional regulator, AraC-family n=11 Tax=Proteobacteria RepID=Q0KFJ5_RALEH Length = 291 Score = 237 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 81/246 (32%), Positives = 117/246 (47%), Gaps = 2/246 (0%) Query: 13 DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72 DR A +T+P HQH QLI A+HG + W+VPP +W+PG Sbjct: 47 DRSPLPVTAMAADYLPGHVTNP-HQHPHAQLIHAVHGVMVVATTEGQWIVPPTRGMWMPG 105 Query: 73 GVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131 G H ++ ++ +I P A +P C L IS L RELIL + Sbjct: 106 GTTHWIRMVGRVQMRTAYIRPDAAPDLPQRCTVLGISALLRELILAAIDIPLPYAPGTRG 165 Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191 RL+++L DE+ P LHLP + +R + + + P L W + + + Sbjct: 166 ARLMRLLLDEVMLVPSLPLHLPRPADDSLRQICDAITGAPDTALTLADWGSRLGLDPKTI 225 Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251 R +ETG++F QWRQQ +L+ AL+ L G V VA LGYDS +AF TMF++ G Sbjct: 226 QRRFARETGMTFGQWRQQARLLAALEKLAAGSKVVDVALDLGYDSPSAFATMFRRQFGVP 285 Query: 252 PGRYIA 257 P + Sbjct: 286 PSAFFR 291 >UniRef50_B5WKD5 Transcriptional regulator, AraC family n=1 Tax=Burkholderia sp. H160 RepID=B5WKD5_9BURK Length = 277 Score = 236 bits (603), Expect = 5e-61, Method: Composition-based stats. Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 3/231 (1%) Query: 29 DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88 P H H +GQ A G +T W+VPPQ AVW+P V H Q++ + Sbjct: 46 SGFVHPDHTHTRGQFAYAAEGVMTVLTTAGNWVVPPQCAVWLPADVPHEMQMSGQVRMLN 105 Query: 89 LFIEPSA---VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 F+ A +P CC + S L R+LI + R++ +L DE+ Sbjct: 106 AFVHVRAKQASQLPRHCCVVSTSSLLRDLISEAVQQPALYNPTTRAGRIMALLVDEIAAM 165 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 L+ P+ + P++ + + P L + A +S R+ RL ++ G+SF Sbjct: 166 QPLALNAPLPNDPRLAALCREVLDAPSATLGLDEAASRIGLSRRSFTRLFREQLGVSFVA 225 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 WR+Q L+ A+ +G+++ +VA+ LGY S TAF TMFK+ +G P Y Sbjct: 226 WREQACLLSAIARFARGESITRVAYDLGYSSPTAFSTMFKRVVGVAPYHYR 276 >UniRef50_B0RW44 Transcriptional regulator, AraC family n=6 Tax=Xanthomonas RepID=B0RW44_XANCB Length = 329 Score = 236 bits (603), Expect = 5e-61, Method: Composition-based stats. Identities = 80/251 (31%), Positives = 128/251 (50%), Gaps = 8/251 (3%) Query: 15 HHEAAVAFCIHAGTDELTSP---VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 + V A + +P H H +GQL+ G +T E+ +PP A W+P Sbjct: 65 WADGPVVVAFRADLRAVWAPETAWHAHVRGQLMYVEQGVLTVHTEHGTSSLPPGCAGWMP 124 Query: 72 GGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQ----R 126 G +H+ ++ + + P A T +P +++S L RE+I+ A+ ++ Sbjct: 125 PGQQHTVELAGPLRGWGVVVRPDACTGLPARSGVIRLSGLAREVIMRAASWPLSEMLGEP 184 Query: 127 AEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAM 186 +P +RL VL DEL Q P + LHLP+ + ++ + + P + L WA + + Sbjct: 185 VDPARQRLAAVLLDELCQAPIEHLHLPMPADRRLLRIARQLLDTPADPRPLDVWATWGGL 244 Query: 187 SERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKK 246 S R+L+R ETGLSF QWRQQ +L L+ L +G V +VA LGY S +AF+++F + Sbjct: 245 SPRSLSRHFRDETGLSFAQWRQQARLAEGLRRLSQGTAVAQVADQLGYSSPSAFVSVFHR 304 Query: 247 GLGQTPGRYIA 257 G P RY+A Sbjct: 305 HFGAPPARYLA 315 >UniRef50_A5FCF5 Transcriptional regulator, AraC family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FCF5_FLAJ1 Length = 272 Score = 236 bits (603), Expect = 5e-61, Method: Composition-based stats. Identities = 71/222 (31%), Positives = 119/222 (53%), Gaps = 1/222 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H + QLI A G + V N +W+V P +WIP GVEH + +FI+PSA Sbjct: 39 HSHPRAQLIYATRGVMNVVVGNNIWVVNPLQGLWIPSGVEHQVTFQKDVNYYSVFIDPSA 98 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 + +P + I ++L+ + + T+ R+I V DEL LP Sbjct: 99 IGGLPEKSFSFDIPMFLKQLVFKIISFGTSGNLTESQLRIIYVFLDELALIVPSATFLPT 158 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 ++ +++ +VE++ + +A MS R L+RL +KE G++F WR +++L+ Sbjct: 159 TNDERLQKVVELLMSDVSSKQTIDYYAELSFMSSRTLSRLFIKELGMNFSDWRTRMKLLE 218 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 A++ L + +++++A LGY++ +AFI MFKK LG+TP YI Sbjct: 219 AIKRLGEKQSIKEIALDLGYETASAFIYMFKKHLGKTPSNYI 260 >UniRef50_Q13ID0 Transcriptional regulator, AraC family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13ID0_BURXL Length = 263 Score = 236 bits (601), Expect = 9e-61, Method: Composition-based stats. Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 3/223 (1%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H+H QL L G++ T E +W V AVWIP GV+H + E +FI+P Sbjct: 36 HRHNWSQLTCPLKGSMRVTTERQVWTVTSFRAVWIPPGVDHELTMVGATEFHAVFIDPQH 95 Query: 96 VTMPT-TCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 +P CC + +SPL REL+ L A +RRL VL +E+ + ++ L + Sbjct: 96 SPLPANQCCVVDVSPLMRELMQWLGADYG--PATDHSRRLTDVLLEEVRRATRRTSALVL 153 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 +++++ E + + P LG+WA SER LARL E G +F WRQQL+L Sbjct: 154 PGDRRLKSLCEALMEDPGSTLTLGEWAHRTGASERTLARLFQIELGTTFGAWRQQLRLSC 213 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 A+ L G ++ ++A LGY + AF TMFK+ G P RY A Sbjct: 214 AVDLLRSGLSLSRIAADLGYADSAAFSTMFKRAFGVAPSRYHA 256 >UniRef50_A3QGH9 Transcriptional regulator, AraC family n=1 Tax=Shewanella loihica PV-4 RepID=A3QGH9_SHELP Length = 262 Score = 236 bits (601), Expect = 9e-61, Method: Composition-based stats. Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 2/261 (0%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 MMHR + +D H H QLI A G + + E + W Sbjct: 1 MMHRQEIEHIPVFGSPSQLFKPVAREYSDGQLLAPHWHHAAQLIYAESGVMELSCEESFW 60 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT--MPTTCCTLKISPLCRELILTL 118 ++ PQ A+W+P + H + L ++ +P A+ +L +SPL REL+ + Sbjct: 61 IISPQQALWMPAELPHRLKARGQVSLRSVYFQPDALPERFSKQPQSLVVSPLLRELMKSA 120 Query: 119 ANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALG 178 T++ + L+Q+L E+ + L LP+ +++ + + P L Sbjct: 121 MPVTSSSQPSSREVHLMQLLMSEIGWAQEIPLKLPMPKDNRLQKICLGLLADPGNDCTLS 180 Query: 179 QWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTT 238 QW S R L+RL + G SF WRQQ ++ A+ L G+ + +VA +GYDS Sbjct: 181 QWGEIVGASPRTLSRLFQTQLGTSFAIWRQQARIFAAIPRLNLGEPIVRVAMEMGYDSAG 240 Query: 239 AFITMFKKGLGQTPGRYIARL 259 AF + FKK +G TP + ++ Sbjct: 241 AFASAFKKMMGVTPSEFRTQV 261 >UniRef50_A3Y5B2 Probable transcriptional regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y5B2_9GAMM Length = 258 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 72/224 (32%), Positives = 115/224 (51%), Gaps = 2/224 (0%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 +H H QL+ A G + +N + VPPQ A+W+P +H +V A ++ P Sbjct: 33 LHHHIWYQLMYASSGVLNVEYQNQIMFVPPQKAIWLPPNCDHRVRVPVGAHFHSVYFRPD 92 Query: 95 AVT-MPTTCCTLKISPLCRELILTLANRTTTQRA-EPMTRRLIQVLFDELPQQPQQQLHL 152 VT + T L ++PL RELIL + T + + +RL QVL D+L Q L + Sbjct: 93 TVTALGNTSKVLSVTPLVRELILAVGEMTHEDKELDDKDKRLTQVLIDQLSLQADSALSI 152 Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212 + S ++ +V + P +L +WA +S R + R+ KE G+ F++WRQ+++L Sbjct: 153 LIPSDKRLAELVRQIIHTPSNGVSLEEWAQTLNLSSRTITRIFTKEVGMGFKEWRQKVRL 212 Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 + A+ L KG +V +VA +GY S +AF FK+ P Y Sbjct: 213 LEAINLLEKGLSVTQVALEVGYQSPSAFTYAFKQVFDTNPASYF 256 >UniRef50_B1KGB7 Transcriptional regulator, AraC family n=2 Tax=Shewanella RepID=B1KGB7_SHEWM Length = 261 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 1/223 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H+H GQ + A G + + ++VPP+ VW+ H ++ EL + + + Sbjct: 37 HRHTWGQFVYASRGVLAVATTVSRYIVPPEQGVWVTPNTCHEVTAISDVELTSFYFDNTV 96 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 ++ P CC L + + LI+ + + RL++++ D+L + L LP Sbjct: 97 LSGFPECCCVLNVEFFLKVLIVESKSIDGDYEWSGVDGRLLRLIRDKLIVAIKIPLQLPY 156 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 ++ ++ + P L QW S R L+RL ETGL++ +WRQ+ + + Sbjct: 157 PKDSRLLAILTQLQLEPSNRNNLVQWGNIVGASARTLSRLFKNETGLTYSEWRQRFNVQV 216 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 A+ L G+TV ++ LGY+S ++FI MF+K G TPG Y Sbjct: 217 AITKLSSGETVSNISLNLGYESPSSFIYMFRKLTGVTPGFYSQ 259 >UniRef50_B4EJY3 AraC family regulatory protein n=10 Tax=Burkholderia RepID=B4EJY3_BURCJ Length = 279 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 2/233 (0%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 + H H QL+ A G + T + ++PP YA+WIP V H+ Sbjct: 38 PGNASVDAHSHPWAQLMYATSGVLEVTTPSGRQLLPPHYAMWIPPHVPHAVSTRDCVAFH 97 Query: 88 FLFIEPSAV--TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 L+++ + + C L ++PL REL++ L+ ++ D + + Sbjct: 98 SLYLDEAIARRDVNDDCTILCMTPLLRELMIATGELPVNYDEAGPDGALVCLIADRIARM 157 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 L +P+ P++ + + P + +L +W + R L+RL ++TGLSF + Sbjct: 158 QPAPLTVPLPRDPRLLKIARALHAAPGDTRSLDEWGRQVGATRRTLSRLFRQDTGLSFTE 217 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 WRQ ++L+ +L L G + VA LGYDST++FI +F TPG Y R Sbjct: 218 WRQAVRLLASLPLLDAGAPIGTVAAQLGYDSTSSFIALFHAKFRVTPGAYAKR 270 >UniRef50_A0NPK3 Probable transcriptional regulator protein, AraC family protein n=2 Tax=Rhodobacteraceae RepID=A0NPK3_9RHOB Length = 262 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 74/241 (30%), Positives = 120/241 (49%), Gaps = 1/241 (0%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 A + + H H QL + G+I E + VPP+ AVW+P V H Sbjct: 16 AAPIIGYARTQLQGRNNGWHSHDAAQLFHVIRGSIAIDTEMGTYFVPPERAVWLPPRVSH 75 Query: 77 SNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135 + + EL +++++ +P T ++++ L R LIL + ++ + R+ Sbjct: 76 QTRYLTDTELRYIYVQYDYTRDLPKTPQVMQVTTLLRALILEFMSYPRSETDKGPAARIA 135 Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 V+ D+L P L LP+ ++R + E + + P +L + A A S R+ R I Sbjct: 136 AVILDQLKMLPVAPLQLPMPQDARLRDLCEGVVRCPAHIPSLSEAADRCATSVRSFERRI 195 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 ETGLS+R W +Q++L AL+ L G +V V+H LGY+ +AF++ FKK G TPGRY Sbjct: 196 KAETGLSYRTWCRQVKLFRALELLASGRSVSDVSHKLGYEGPSAFVSTFKKAFGVTPGRY 255 Query: 256 I 256 Sbjct: 256 F 256 >UniRef50_D1P6X5 Transcriptional regulator, AraC family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P6X5_9ENTR Length = 276 Score = 232 bits (593), Expect = 8e-60, Method: Composition-based stats. Identities = 75/263 (28%), Positives = 117/263 (44%), Gaps = 3/263 (1%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 H N++ D +A + L S H+HR+ Q + G I + + W+ Sbjct: 10 THMRNISLNTIDAVPRDVLAIGTDYPPNVLLS-AHEHRRAQFLYGATGLIEVSTADGEWV 68 Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLAN 120 +PP VWIP H ++ N L+IEP+ A C L++S L R+L+L + Sbjct: 69 IPPDCGVWIPAQTLHETRML-NVSTRSLYIEPTVAPRQSRKCEVLRVSRLLRQLLLEAVD 127 Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180 LIQ++ E+ + P+ + T+ P +W Sbjct: 128 IPLEYDLHGREGILIQLILHEVARAKPLPFFAPIPRDTHLATLCREFLTAPHITSLPQEW 187 Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240 A SER+ +R +TGLSF WRQQ L+ A+ + G ++ +VA LGY + +F Sbjct: 188 AKKLHKSERSFSRFFSAQTGLSFSNWRQQACLLNAITNISAGKSITEVAFDLGYCNVGSF 247 Query: 241 ITMFKKGLGQTPGRYIARLTTVS 263 TMFKK LGQ P +I ++ S Sbjct: 248 STMFKKWLGQPPSSFIQQIDESS 270 >UniRef50_Q39NN6 Transcriptional regulator, AraC family n=9 Tax=Betaproteobacteria RepID=Q39NN6_BURS3 Length = 266 Score = 232 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 83/250 (33%), Positives = 134/250 (53%), Gaps = 4/250 (1%) Query: 9 GYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAV 68 +E +A+A GT + H+HR+ QL+ A+ G + E A W+VPP V Sbjct: 20 PFESTPMPVSAMAATYAHGT---SIAPHRHRRAQLLYAIEGVMHVQSEGASWVVPPTRGV 76 Query: 69 WIPGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRA 127 W+ G++H+ Q++ + ++ +F+EP AV +P C +++ PL RELIL + Sbjct: 77 WLEAGLDHTVQMSGDVQMRTVFVEPGAVEHLPARSCVVEVHPLLRELILAAVDVPLDYAP 136 Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187 L+ +L E+ P L+LP P++RT+ + + P + + +WA +S Sbjct: 137 GSRHDHLMHLLLAEVTVAPLLPLYLPWPHDPRLRTICDALVAAPDDLRTIAEWADLLGLS 196 Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247 R L R +ETGLSFR+WR+Q +L++AL+ L G+ V VA GY S +AF MFK+ Sbjct: 197 VRTLHRAFRRETGLSFRRWREQARLLLALKRLAHGEKVLTVAMDHGYSSQSAFSAMFKRH 256 Query: 248 LGQTPGRYIA 257 G +P + A Sbjct: 257 FGVSPSAFYA 266 >UniRef50_A3D530 Transcriptional regulator, AraC family n=12 Tax=Gammaproteobacteria RepID=A3D530_SHEB5 Length = 283 Score = 232 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 81/270 (30%), Positives = 125/270 (46%), Gaps = 3/270 (1%) Query: 4 RLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63 L + V E H H +GQL+ A G + ENA+W+VP Sbjct: 10 LLTPSDVAFITDANRPVLTHTRNMAAEAGIEPHSHPRGQLLWAAKGLLRVRSENAVWVVP 69 Query: 64 PQYAVWIPGGVEHSNQVTANAELCFLFIEP--SAVTMPTTCCTLKISPLCRELILTLANR 121 +AVWIP + H +A ++I+P ++ T + ++ L REL+L L Sbjct: 70 STHAVWIPCNLPHQVNSETHAHTRNIYIDPSYDVRSLDTQVVMVTMTALMRELVLKLCES 129 Query: 122 TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWA 181 + + RL V DEL HLP S P++ +++ + + P L + A Sbjct: 130 SHLMNS-GQLHRLGLVAIDELETLDSLDAHLPAGSDPRLSRLIQKLIRHPTVNYTLTELA 188 Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241 S R + RL ETGL++RQWRQ+ +L+ +L+ L +G++ +VAH+LGY S ++F Sbjct: 189 EMGGASVRTIERLFKAETGLTYRQWRQRFRLLNSLESLSQGESTTRVAHSLGYLSVSSFS 248 Query: 242 TMFKKGLGQTPGRYIARLTTVSPQSAKPDP 271 FK G TP Y S + PDP Sbjct: 249 AAFKMQFGCTPQDYPQHKPMKSKVNWFPDP 278 >UniRef50_B4SQ42 Transcriptional regulator, AraC family n=5 Tax=Xanthomonadaceae RepID=B4SQ42_STRM5 Length = 293 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 1/272 (0%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 ++ L+ +E + H H++ QLI G +T + W Sbjct: 13 LLRDDALDWFERNDGPPVVAFRFDSPQGLVREVDWHHHQRAQLICVERGLLTTRTSHGTW 72 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLA 119 + P A W+P H+ + + + A + C L +S L + L + Sbjct: 73 SLAPGSAGWMPPLEPHTVTLDGPLRGWGMALAAPACAALPSDPCVLGLSKLAQALADRIC 132 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 P + +I VL DE+ P+Q++HLP+ ++ + + P + +L + Sbjct: 133 EWPLGYATTPERQHIIDVLLDEIRTAPRQRMHLPMPHDRRLLKIASQLLADPSDERSLAE 192 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 WA + +S R+L R ET LSF QWRQQ +L AL+ L G +V +AH LG+ S +A Sbjct: 193 WAHWAGLSPRSLTRHFRDETTLSFAQWRQQARLSEALRQLTDGRSVADIAHALGFSSASA 252 Query: 240 FITMFKKGLGQTPGRYIARLTTVSPQSAKPDP 271 F+T+F++ G PGRY+AR P Sbjct: 253 FVTVFRRHFGLPPGRYLARAGHGLETGLDPAR 284 >UniRef50_Q2BIT2 Transcriptional regulator, AraC family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIT2_9GAMM Length = 262 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 75/243 (30%), Positives = 119/243 (48%), Gaps = 3/243 (1%) Query: 19 AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78 + + + + ++ P H G+ + + G + E + VPP + +W P G EH Sbjct: 19 PIYYFLRSMPEDTIYPAQTHPWGEFVFSFSGVLELHAEEQEFRVPPNFGLWHPAGTEHQG 78 Query: 79 QVTANAELCFLFIEPSAVT---MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135 +E C L+I+ T MP T C L +SP+ RE+++ L N RL+ Sbjct: 79 GNRNASEHCSLYIDDELATKRGMPKTSCALLVSPMLREMLIHLRNHFPKPPYTEQESRLL 138 Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 V+ D+L P +LP S P I ++ + P ++ A F MSER LAR Sbjct: 139 DVILDQLIVTPIAGNYLPDSKDPLITQVLAYLKDDPGANHSIRAIAEQFGMSERTLARKA 198 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 E + +WRQ+L+++ A+ L +G +V+ VA LGY + +AFI MFK+ LG TP Y Sbjct: 199 QSELNMPLSEWRQRLKVVRAVPMLQEGTSVESVALDLGYSTASAFIAMFKRLLGTTPDEY 258 Query: 256 IAR 258 + Sbjct: 259 RKK 261 >UniRef50_Q1ZB18 Transcriptional Regulator, AraC family protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1ZB18_PHOPR Length = 259 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 75/243 (30%), Positives = 118/243 (48%), Gaps = 2/243 (0%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 A + + H H GQ A+ G + ++ PPQYA+W+P GVE Sbjct: 17 PRPVYARSENWDHSGTQTLWHSHAWGQWSYAIKGVLVVHTHAGRFVAPPQYAIWVPEGVE 76 Query: 76 HSNQVTANAELCFLFIEPSAV--TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRR 133 H + A++ L+I ++ C ++S L +ELIL + + R Sbjct: 77 HQVISSGAAQMRSLYIRTGSLINLCWHNACVCEVSSLAKELILRFGCFDSEYKLNGKENR 136 Query: 134 LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193 L VL D L PQ Q LP+ S ++ + + + E + Q +S R+++R Sbjct: 137 LANVLLDTLDDLPQAQTQLPMPSDKRLLAIFDYLQVHTGEQINIDQIGHKVGLSGRSVSR 196 Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253 L +ETGL+F+QWRQ+L+L+ AL L + V +VA GY+S +AF+ F K G+TPG Sbjct: 197 LFKQETGLTFQQWRQRLRLLSALNLLEQAMPVTQVAMECGYESLSAFVAAFGKQFGETPG 256 Query: 254 RYI 256 +Y Sbjct: 257 KYF 259 >UniRef50_C6RQZ7 Transcriptional regulator, AraC family n=1 Tax=Acinetobacter radioresistens SK82 RepID=C6RQZ7_ACIRA Length = 254 Score = 231 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 1/241 (0%) Query: 19 AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78 V + TD H+H + QL+ L G I +W++PP +WIP HS Sbjct: 11 PVYAYAQSYTDGYVEGTHRHDRIQLLHTLSGVIHVRTSEGIWVIPPSKGIWIPENKRHSI 70 Query: 79 QVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137 ++ N E +F++P + T C + I L ELI RL+++ Sbjct: 71 KIFGNVEARGIFVDPFARADFNTQCSVVAIPKLLSELINQAVQIKEEILPHTRNERLLEL 130 Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197 + DEL + LP + ++ + E + L A A++ + L+RL K Sbjct: 131 ILDELRFLEEIPFRLPEAKSEILKEICENIKADLSATNHLEMVAKQHALNSKTLSRLFQK 190 Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 E ++F W +Q +L+ AL L + +A LGY+S +AF MFK+ +G TP YI Sbjct: 191 ELNMNFSVWLKQAKLLQALTDLEMRKPILNIALDLGYESPSAFSYMFKRQMGMTPTEYIK 250 Query: 258 R 258 R Sbjct: 251 R 251 >UniRef50_B1TGD6 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria RepID=B1TGD6_9BURK Length = 261 Score = 231 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 78/253 (30%), Positives = 124/253 (49%), Gaps = 5/253 (1%) Query: 7 LNGYEPDRHHEAAVAFC----IHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMV 62 + YEP+ + A C I + E S H H++ QL+ GA+T + + Sbjct: 1 MAHYEPNHVLDLDAASCPIVGIAYESREHDSQWHAHQRTQLLYLTEGAVTLQTAERIGHL 60 Query: 63 PPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANR 121 P A+W+P GV H + L+ + +P +++S L RELI+ + Sbjct: 61 APLQAIWLPEGVRHRAVMHGRFAYRSLYFDVQTYRDLPRAAVIIEVSQLLRELIVRVTEW 120 Query: 122 TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWA 181 RL+ VL DEL P L+LP+ ++ + + P E L +WA Sbjct: 121 PIDDALTDARTRLVSVLLDELEAAPASPLYLPMPRDRRLGAIANALVDDPSEQRTLDEWA 180 Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241 S R LARL V+ETGL++ QWR + +L++A L +G ++ +VAH +GY S +AFI Sbjct: 181 DRVGASARTLARLFVRETGLTYVQWRTRCRLLVAQTRLAEGASITEVAHAVGYASDSAFI 240 Query: 242 TMFKKGLGQTPGR 254 M+++ G+ PGR Sbjct: 241 AMYRRLYGEPPGR 253 >UniRef50_B9R0N9 Transcriptional regulator, AraC family protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R0N9_9RHOB Length = 279 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 73/252 (28%), Positives = 121/252 (48%), Gaps = 1/252 (0%) Query: 6 NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65 L+ + + + + H H QL + G+I E + PP+ Sbjct: 23 ELSEFPDHEVRAKIIGYANSQSAGRGHNGWHSHDSAQLFHVVKGSIAIDTEVGTFFAPPE 82 Query: 66 YAVWIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTT 124 AVW+P + H + + E+ F+++ A +P T ++++ L R LIL + Sbjct: 83 RAVWLPPRIAHETRYLTDTEIRFVYVNYDHAQDLPKTAQVIQVTTLLRALILEFMSYPRA 142 Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184 + + R+ V+ D+L P L LP+ PK+R + + + + P AL A Sbjct: 143 ETIDGPAGRIADVILDQLKMLPAAPLQLPMPQDPKLRDLCDGLVRCPAHVPALADAAARS 202 Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244 AMS R+ R I ETG+++R W +Q++L AL+ L G +V V+H LGY+ +AF+ F Sbjct: 203 AMSVRSFERRIKAETGMNYRTWCRQVKLFRALELLAAGRSVSDVSHKLGYEGPSAFVATF 262 Query: 245 KKGLGQTPGRYI 256 +K G TPGRY Sbjct: 263 RKAFGVTPGRYF 274 >UniRef50_A5V470 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V470_SPHWW Length = 261 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 72/244 (29%), Positives = 110/244 (45%), Gaps = 1/244 (0%) Query: 15 HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGV 74 H + + + H+HR+GQLI A G + + +W+ PP+ AVW PGGV Sbjct: 11 HVDRPIVAVGNEYPPAFELDWHRHRRGQLIYAARGVVVVSTAQGVWVAPPERAVWTPGGV 70 Query: 75 EHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRR 133 H+ ++ + IEP A ++ +++SPL R L+ Sbjct: 71 SHAVRMVGAVSTRSVLIEPDAHGSLGDANKVIQVSPLLRSLLAAACEIDPEYDVAGRDGM 130 Query: 134 LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193 ++ +L EL + P L +P +I + P + W+ M R R Sbjct: 131 VMALLLAELARAPSVSLAVPFPKKAEIARKCQAFLDAPSPHDTIDMWSAELGMGRRAFTR 190 Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253 L ++TGLSF WRQQ L++AL L G+ V +A LGY+S AF TMFK+ G P Sbjct: 191 LFRQQTGLSFGAWRQQACLLIALPRLAAGEAVTTIALDLGYESPAAFTTMFKRLAGVAPS 250 Query: 254 RYIA 257 Y + Sbjct: 251 HYQS 254 >UniRef50_A9ISK4 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria RepID=A9ISK4_BORPD Length = 393 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 81/254 (31%), Positives = 127/254 (50%), Gaps = 3/254 (1%) Query: 18 AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77 + +G + +H H +GQL+ +L G ++ + LW+VP A+WIP G+ H+ Sbjct: 138 PPLIAVAASGPRPRATGMHHHARGQLLGSLRGLLSVGTGDGLWVVPAAQAIWIPPGMPHN 197 Query: 78 NQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136 + ++ P A +P C + S L R +L A R+E RL Sbjct: 198 LRSHGPFAGWSAYLAPQACAGLPDAVCAMPCSELLRATVLRAAA--GNSRSEAANERLAG 255 Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196 V+ DE+ P+ LP+ P++ + + +A P L WA + AM+ R L R Sbjct: 256 VILDEIHALPRSAPGLPMPRDPRLLRIAQALADEPGNPRRLEDWARWAAMAPRTLMRRHQ 315 Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 +ETGL F WRQ+L+L+ AL+ L G V VA LGYD+ +AFI MF++ G TP RY Sbjct: 316 QETGLPFGDWRQRLRLMRALEMLAAGRPVTTVALDLGYDNVSAFIAMFRRAYGTTPARYF 375 Query: 257 ARLTTVSPQSAKPD 270 + + P ++ P+ Sbjct: 376 DQSRPLPPGASAPE 389 >UniRef50_Q11FA3 Transcriptional regulator, AraC family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11FA3_MESSB Length = 258 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 71/240 (29%), Positives = 112/240 (46%), Gaps = 1/240 (0%) Query: 20 VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79 V P+H H Q + A G + T+E A +++ P+ A+WIP GV H+ Sbjct: 19 VFLRSQKLPARHGFPMHTHPWNQFVYATTGTLMVTIEQARYVITPEQAIWIPTGVRHTTT 78 Query: 80 VTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL 138 ++ E L++E + MP C L +S L R LIL LA L V+ Sbjct: 79 ALSDVEFRNLYVEDLPNLNMPADCSVLAVSTLLRSLILELAEVEQKSDHSEYRDHLDAVI 138 Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198 ++ + + LP +R + E++ P E + +WA MS R L+R E Sbjct: 139 LVQMSRLRKLDFFLPWPHSSHLREICEVLYAHPDEPRDITEWASRAGMSARTLSRHFNAE 198 Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 TG+S R WR +L++ A++ L V +A LG+ S +AF F+ +G +P +IAR Sbjct: 199 TGMSLRVWRHRLRVFRAVELLSAHWRVTDIALELGFSSASAFTYAFRTEMGCSPTEWIAR 258 >UniRef50_Q2K0F2 Probable transcriptional regulator protein, AraC family n=6 Tax=Rhizobium etli RepID=Q2K0F2_RHIEC Length = 278 Score = 229 bits (585), Expect = 6e-59, Method: Composition-based stats. Identities = 75/233 (32%), Positives = 113/233 (48%), Gaps = 1/233 (0%) Query: 26 AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85 A T H H + QL + G++ E ++VPP+ AV++P GV H E Sbjct: 30 AEPAGRTYSFHAHHRAQLFQIVRGSLRLETERGYFIVPPERAVFVPSGVLHEVTYLQETE 89 Query: 86 LCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ 144 +LF P AV +P+ + +PL RE IL RL+ V+ D+L Sbjct: 90 RSYLFFRPDAVVNLPSQVSVIGTTPLLRETILAFLEIPRADAGSARAERLVAVILDQLQT 149 Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204 P L LP + ++R++ + P L + A AMS R+ R ETG+SFR Sbjct: 150 SPVAPLSLPSPASERLRSIASDIRNEPGADWPLDELASRAAMSPRSFQRHFHTETGMSFR 209 Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 WRQQ +L+ A++ L G +V +A +LGY +AFI +F+ G +PG+Y Sbjct: 210 AWRQQAKLLKAVEWLAAGRSVGDIAFSLGYSGPSAFIAVFRTAFGVSPGQYFQ 262 >UniRef50_A3RTS8 Transcriptional regulator, AraC family n=4 Tax=Ralstonia solanacearum RepID=A3RTS8_RALSO Length = 365 Score = 229 bits (584), Expect = 8e-59, Method: Composition-based stats. Identities = 74/226 (32%), Positives = 112/226 (49%), Gaps = 3/226 (1%) Query: 34 PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93 P H H Q+ + G + + W+VPP A+WIP G+ H V A L L+I+P Sbjct: 134 PRHTHAWAQVAYSHTGVLRVQAGDTAWVVPPSRAIWIPPGIVHEVWVVEAAFLRTLYIDP 193 Query: 94 SAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152 S VT C +++SPL RELI + R A + L ++ DEL + L L Sbjct: 194 SVVTDALAQCRVMEVSPLLRELIAAMDVRRPLAPA--REQALATLILDELRRSAPLPLDL 251 Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212 P+ + ++R + E + P A S R LAR E G++F QWRQQ L Sbjct: 252 PMPADKRLRALCERVMADPGTPLTFDALAREVGASTRTLARRFRDELGVNFSQWRQQAVL 311 Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 A+ + +G + ++A LGY+S +AF MF++ GQ+P ++ R Sbjct: 312 ASAIPLMSQGLPLSRIAQELGYNSQSAFSAMFRRAFGQSPSAFLHR 357 >UniRef50_B1JZJ0 Transcriptional regulator, AraC family n=2 Tax=Burkholderia cenocepacia RepID=B1JZJ0_BURCC Length = 261 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 78/244 (31%), Positives = 115/244 (47%), Gaps = 3/244 (1%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 A ++ E + HQHR GQL+ A G + W +PP AVW+P V+ Sbjct: 17 PRQVAATLVNYRQGERVT-WHQHRHGQLVFAAKGVVRVLTPARTWTLPPSRAVWLPSDVD 75 Query: 76 HSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134 H + LC +++EP P + +S L REL LT+ + T A Sbjct: 76 HELHAVGDTALCSVYMEPEVFPWPWEEPAVIAVSALLRELALTVVDGADTYTATSRAGLA 135 Query: 135 IQVLFDELPQQPQQQL-HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193 +L L + P +P+ ++ + E M P L W F S R LAR Sbjct: 136 ASLLMKVLAETPSLAEPGVPLPRDERLLKLCEHMMNDPASDLTLDFWGEQFGASGRTLAR 195 Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253 + ETGL+F WRQQ+++ A+ L G +V +VA LGY S +AFI MF++ G++P Sbjct: 196 RLHAETGLTFVAWRQQMRVAEAMTRLALGQSVARVAKDLGYRSASAFIVMFRRITGESPQ 255 Query: 254 RYIA 257 RY+A Sbjct: 256 RYLA 259 >UniRef50_Q3JQZ2 Transcriptional regulator, AraC family n=59 Tax=Burkholderiales RepID=Q3JQZ2_BURP1 Length = 450 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 81/256 (31%), Positives = 125/256 (48%), Gaps = 8/256 (3%) Query: 5 LNLNGYEPDR-HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63 + + P R H A I AG P H H QL A G + + WMVP Sbjct: 180 DVPSEFAPTRSHPMRVRARAIAAGMR---VPPHAHAWAQLAYASRGVLRLATAGSTWMVP 236 Query: 64 PQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRT 122 P A+W+P + H + +A L L+++ SAV C +++S L RELI+ L R+ Sbjct: 237 PSRAIWVPPRIAHEVVIVEDAYLRTLYVDESAVPGGLDACRVVEVSGLLRELIVALEARS 296 Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182 + R L +++ DEL + L +P+ + ++R + E + P + +L WA Sbjct: 297 LNRT---RERLLAELVLDELTRAEPLPLAVPMPTEKRLRALCEAVLAHPAQGESLEHWAA 353 Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242 S R +ARL +E +SF QWRQQ L A+ L +G + +A+ LGY S +AF Sbjct: 354 GVGASTRTIARLFKQELSVSFSQWRQQALLARAIPLLNQGRPLSHIANELGYQSQSAFSA 413 Query: 243 MFKKGLGQTPGRYIAR 258 MF++ G +P +I R Sbjct: 414 MFRRAFGASPRAFIQR 429 >UniRef50_A9IA98 Transcriptional regulator, AraC family n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IA98_BORPD Length = 243 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 2/229 (0%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 H H +GQL+ A G + W + P+ A+WI GV+H + + +L IEP Sbjct: 15 WHSHEQGQLVHATSGVVRVLTSQGGWTLAPRQALWIAPGVDHELHMIGQVAMRWLRIEPD 74 Query: 95 AVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ-QQLHL 152 A + C ++++PL RELIL + E ++ +L +L + L Sbjct: 75 AAPWLWAECRQIRVTPLLRELILKMLQDPPVYPPESNAAMIVPLLLRQLQEAEVIVHGKL 134 Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212 P+ ++ + E++ + P + S R L+RL ++TGL+F QWRQQL+L Sbjct: 135 PLPRDKRLLKVCEVLIRSPANNDPMALLGERAGTSVRTLSRLFKEQTGLTFVQWRQQLRL 194 Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTT 261 A+ L G +V VA +GY + AF TMF++ LG TP RY+ + Sbjct: 195 SEAVCQLSLGQSVSSVAQDMGYATANAFSTMFRRTLGATPQRYMRETRS 243 >UniRef50_A1TK09 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria RepID=A1TK09_ACIAC Length = 276 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 78/239 (32%), Positives = 118/239 (49%), Gaps = 1/239 (0%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 + P QH GQ + G I TV++ + PP + VW+P G EH + Sbjct: 37 PEGADFPTEQHPWGQFVYPRAGVIELTVKSNRYAAPPDFGVWLPPGTEHVARADGETSYF 96 Query: 88 FLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146 L I+ +P L +S + + + L L R + P RL++VL D+L Sbjct: 97 VLDIDADLCARLPRRASVLSVSAIAKAVFLDLQKRQVRKPQSPEDVRLMEVLIDQLSASV 156 Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206 LP+SS +R ++E + K P + L +WA + +ER LAR ++ G++F +W Sbjct: 157 PVDSFLPMSSDAALRNVLEALCKNPGDSRTLVEWARYVHSTERTLARRCTRDLGMTFLEW 216 Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ 265 RQ+L+L A L G VQ VA LGY +T+AFI MF+K +G TP + RL + Q Sbjct: 217 RQRLRLSRAFAMLADGLAVQVVAQQLGYGTTSAFIAMFQKTIGTTPNTFRGRLRDGAEQ 275 >UniRef50_B7GXZ6 Bacterial regulatory helix-turn-helix protein, AraC family protein n=12 Tax=Acinetobacter RepID=B7GXZ6_ACIB3 Length = 262 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 69/234 (29%), Positives = 120/234 (51%), Gaps = 6/234 (2%) Query: 30 ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89 +P H H + Q + A G I N +W+VPP A+WIP VEHS ++ +L Sbjct: 24 REITPTHTHTRAQFLYASTGNIQVFTPNHVWIVPPMCALWIPANVEHSVISLSHVKLNTA 83 Query: 90 FIEP-SAVTMPTTCCTLKISPLCRELILTLANR-----TTTQRAEPMTRRLIQVLFDELP 143 +E +A M C +++S L EL++ L T ++ ++R L ++F+E+ Sbjct: 84 LVEVNAAARMGQHCFIIRVSNLLHELLIRLNEIEREETPNTATSQELSRSLQILIFEEIQ 143 Query: 144 QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203 + + +P ++ + + + P L WA S R L R+ KETGLS+ Sbjct: 144 RANLLPIQIPWPKDKRLLKICQELLHTPNHSRDLTDWADDIGASSRTLMRMFQKETGLSY 203 Query: 204 RQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 R W QQ+ + +AL + G ++ +++ +LGY + +AF MFK+ LG+TP ++ + Sbjct: 204 RAWVQQMHIALALSKIANGKSIAQISESLGYTNPSAFSAMFKRHLGKTPQQFRS 257 >UniRef50_C4XL68 AraC family transcriptional regulator n=2 Tax=Desulfovibrio RepID=C4XL68_DESMR Length = 350 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 74/224 (33%), Positives = 105/224 (46%), Gaps = 1/224 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H GQL A G I T + + PP+ AVW+P G+ H T A + L+I Sbjct: 33 HSHPFGQLSYAGEGVIEVTTPVSSHVAPPRRAVWVPPGLLHEVTTTRPAAMRSLYIRADQ 92 Query: 96 VTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 P C L+++ L RELIL A + RL +VL D+L P+ L LP Sbjct: 93 TIFCPPRCLVLRVTRLARELILAAAALPPAYDEDGSAGRLARVLLDQLAGLPEADLSLPW 152 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 + P + + + P + + A MS R LAR +TGL F WR++ +L+ Sbjct: 153 PADPALAALCRELRDAPDDGRDMDALARQAGMSGRTLARRFEAQTGLRFGAWRRRQRLLA 212 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 AL L GD V A GY S +AF+ F+ G TPG ++ + Sbjct: 213 ALGRLEAGDNVTTAALESGYASVSAFVAAFRDMFGATPGAFLRQ 256 >UniRef50_B7GW45 Bacterial regulatory helix-turn-helix protein, AraC family protein n=13 Tax=Acinetobacter RepID=B7GW45_ACIB3 Length = 264 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 72/237 (30%), Positives = 115/237 (48%), Gaps = 2/237 (0%) Query: 22 FCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT 81 F + E P H H G+ I A G + ++ ++ PP Y +W+P +HS Sbjct: 26 FRVRNAPAETVYPQHAHAWGEFIYAFSGVLEVNIDQINYLTPPPYGIWLPPYTKHSGINR 85 Query: 82 ANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFD 140 L++ S +P L SPL L+ L + RL+QVL D Sbjct: 86 NEVTHATLYVHESLCQKLPQKAGILLTSPLVPALLDHLRQNPQ-DETQVEYIRLLQVLLD 144 Query: 141 ELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETG 200 +L Q +LP + HP + ++ + + P + L + A M+ER LAR KE G Sbjct: 145 QLIQAELVGSYLPTTDHPALAKILNDLHQCPADNSTLQELAERINMTERTLARYSQKELG 204 Query: 201 LSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 +S +WRQ+L+++ A+ L +G T++ +A LGY S +AFI MFK+ +G TP ++ Sbjct: 205 MSLHEWRQRLKVMKAMTMLNQGKTIESIAFDLGYASASAFIYMFKRWMGFTPDQFRK 261 >UniRef50_B6ELX6 HTH-type transcriptional regulator, AraC family n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6ELX6_ALISL Length = 275 Score = 227 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 69/248 (27%), Positives = 118/248 (47%), Gaps = 4/248 (1%) Query: 22 FCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT 81 F I A T+ L H + GQL L G + V+ + P Y +W P +H Sbjct: 30 FFIEAKTETL---PHSYSWGQLHLIKQGVLEMEVDQQKMVCPANYTIWTPPHQKHRAFNR 86 Query: 82 ANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFD 140 ++ E C + I P C + ++PL R +I L R TT + + L VL D Sbjct: 87 SDIEYCAINITAELSEKFPKHACMIPLTPLLRAIIDDLIERKTTMVSSEEDKCLSYVLMD 146 Query: 141 ELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETG 200 L + +++LP + + ++ + + P + +L WA +ER LAR KE Sbjct: 147 RLVKINPIEIYLPSTQDKLLAPILTQLEETPEDDSSLSVWAKRVFSTERTLARRFQKELK 206 Query: 201 LSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260 +SF WRQ+ +L+ A+ L + ++ ++A+ LGY ++FI MF+K G TP ++ + Sbjct: 207 MSFNDWRQRAKLVKAMTLLKESISINEIAYQLGYSQGSSFIKMFRKHTGVTPEQFRKQNE 266 Query: 261 TVSPQSAK 268 T++ + Sbjct: 267 TLTVEITS 274 >UniRef50_B2I1A9 AraC-type DNA-binding domain-containing protein n=8 Tax=Gammaproteobacteria RepID=B2I1A9_ACIBC Length = 262 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 69/253 (27%), Positives = 109/253 (43%), Gaps = 3/253 (1%) Query: 10 YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69 + D +A +A D L H HR+ Q + A G + E+ W+V P VW Sbjct: 7 NDVDHLPQAVLALGSDYPADTL-LDTHSHRRAQFLYAPEGLMKVETEDGQWLVLPYSGVW 65 Query: 70 IPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCC-TLKISPLCRELILTLANRTTTQRAE 128 IP G H ++ L+IE S C +++SPL +L++ + Sbjct: 66 IPAGKPHRVWLSK-VSTYSLYIEVSNAPRQANYCEVIQVSPLLHQLLIQANQLPIDYQRA 124 Query: 129 PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSE 188 LI +L EL P L +P+ + + + P + WA SE Sbjct: 125 GRDGSLIDLLLYELEAAPALPLFIPLPHNTLLSKQCADFMQHPDIHSSPKDWAHDHNKSE 184 Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGL 248 R R ETG+SF+ WR ++ +I AL L + ++ ++A +LGY+ + AF MF K + Sbjct: 185 RTFHRWFKTETGMSFQAWRNRVCIIYALNALKENISITEIAFSLGYEHSAAFTAMFSKIM 244 Query: 249 GQTPGRYIARLTT 261 G P + R T Sbjct: 245 GYPPTHFQKRFHT 257 >UniRef50_B5EUU3 Transcriptional regulator, AraC/XylS family n=29 Tax=Gammaproteobacteria RepID=B5EUU3_VIBFM Length = 260 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 65/249 (26%), Positives = 119/249 (47%), Gaps = 3/249 (1%) Query: 10 YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69 ++ D+ + I A S +H H+KGQL+ A G ++ + +++ ++PP AVW Sbjct: 10 FDADKLPADVIG--IAADVGRHDSGMHYHQKGQLLYAPEGCMSFALSHSMCVLPPTKAVW 67 Query: 70 IPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129 IP H +T L+ + P +++ L R LI +A + + Sbjct: 68 IPANTPHRAFMTNVVAYRSLYFDCDKFPCPEDIVMIEVDELLRALINKMAMWPW-DKPKS 126 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 T + ++ + QQ LP+ + ++ T E + K L + S + Sbjct: 127 ETLHTTALFWESFYEAHQQPFSLPLPTGKRLITFSEQVQKPDFLAPDLQTLSKKIGASSK 186 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 + RL KETG+S+++W+QQ +++ +++ L + V VA L + S +AFI+ FKK +G Sbjct: 187 TITRLFKKETGMSYQEWKQQWRVLKSIELLCENTQVSDVAFQLDFSSDSAFISFFKKQVG 246 Query: 250 QTPGRYIAR 258 QTP +I + Sbjct: 247 QTPLAFIKQ 255 >UniRef50_Q7MFB7 AraC-type DNA-binding domain-containing protein n=32 Tax=Gammaproteobacteria RepID=Q7MFB7_VIBVY Length = 287 Score = 226 bits (575), Expect = 8e-58, Method: Composition-based stats. Identities = 75/245 (30%), Positives = 120/245 (48%), Gaps = 1/245 (0%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 + V + H H GQ+ L G + + ++ PP A+W+P G+ Sbjct: 42 PPSDVFMNFEEFLSNTETREHSHTWGQVQLISGGILEMEAQGTRFLAPPHLAIWVPPGIM 101 Query: 76 HSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134 H + E C L I P C ++++P+ +I R E +RL Sbjct: 102 HRSFNRRPLEYCSLNIAKQLTDKFPGKTCLIQVTPIVSAIIDDFRLRDINVATEESDKRL 161 Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 +QVL D+L + Q LP S H + ++ + + P + +L +WA +ER LAR Sbjct: 162 VQVLLDQLATKETQHHFLPSSDHKYLAPILAHVEENPTDTTSLSEWAEKVHTTERTLARH 221 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 E G+SF +WR +++ + +++ L KG TV++VA TLGY+ + FI+MFKK GQTP + Sbjct: 222 CQSELGMSFTEWRLRVRYLYSMELLRKGQTVKEVALTLGYNQASPFISMFKKYSGQTPEQ 281 Query: 255 YIARL 259 Y RL Sbjct: 282 YKNRL 286 >UniRef50_Q7D2T6 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria RepID=Q7D2T6_AGRT5 Length = 215 Score = 226 bits (575), Expect = 9e-58, Method: Composition-based stats. Identities = 102/215 (47%), Positives = 141/215 (65%), Gaps = 2/215 (0%) Query: 45 LALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCT 104 + L G +TC V + +WMVPP VW+PGG+ HSN TANA L FLFIEP A +P CCT Sbjct: 1 MPLRGGVTCRVPSGMWMVPPHCGVWVPGGMLHSNVATANARLFFLFIEPGAADLPNRCCT 60 Query: 105 LKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMV 164 L +SPL RELI+ LA+++ A+ + +L L + P + LHLP++ P++ + Sbjct: 61 LSLSPLVRELIIELADQSEVATADS--ELMTTLLLSALSRMPVEHLHLPLTDEPRLARIA 118 Query: 165 EMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDT 224 +A P + + QWA AMSE +LARL+ +TGL+F +WRQQLQLI+A++ L G T Sbjct: 119 SELADDPSDRSTMAQWARRVAMSENSLARLVQHQTGLTFGRWRQQLQLIIAIRSLASGAT 178 Query: 225 VQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 VQ+V+ LGY+S +AFITMFKK LG +P RY+ Sbjct: 179 VQQVSGDLGYESVSAFITMFKKALGTSPSRYLRNF 213 >UniRef50_UPI00019092C6 AraC family transcriptional regulator n=1 Tax=Rhizobium etli CIAT 894 RepID=UPI00019092C6 Length = 283 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 72/222 (32%), Positives = 104/222 (46%), Gaps = 1/222 (0%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 H+HR+GQL+ A G I T W++PP +WIP GV HS + + L++E Sbjct: 4 PHEHRRGQLMNATSGLIVLTTPEGKWVMPPHRGMWIPAGVRHSVRAGGLVRMQSLYVETD 63 Query: 95 -AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153 A MP C L+I+ R LI + + + ++ L+ + E+ + P L LP Sbjct: 64 RAEAMPVHCQVLEITTFMRSLIGEVVGLSLDTEVDGRSQALMDLTLYEMERLPSLPLSLP 123 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 S + P W+ MS R R+ ++TGLSF WRQQ L+ Sbjct: 124 FPSDERFAKKCREFVGQPNIHQTTDDWSRELGMSRRAFTRMFRQQTGLSFVGWRQQACLL 183 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 AL L G +V VA LGY++ AF MFK+ G+ P Y Sbjct: 184 SALPQLSAGQSVTSVAMELGYENPAAFTIMFKRAFGKPPLAY 225 >UniRef50_C9PF84 Transcriptional regulator AraC family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PF84_VIBFU Length = 248 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 1/243 (0%) Query: 18 AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77 V H T H+H+ Q + AL+G I W+V +WIP GV HS Sbjct: 4 PPVLAYAHDYMHGDTEAAHEHQCAQFLHALNGVIRVDTAAGTWVVTANKGMWIPAGVSHS 63 Query: 78 NQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136 ++T + ++ LF++ + +P TC ++ L + LI+ + + A R+ + Sbjct: 64 LRITGHVKVRTLFVDAMARADLPNTCVLSEVPSLLKHLIVEAVSLPEERIAGTREERIFE 123 Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196 ++ DEL + +LP S + + + ++ A + SER ++R Sbjct: 124 LILDELRRLKPVDFYLPNPSSDGLIMLCDYVSDRIAHPWTATDAAKYLGQSERTVSRKFQ 183 Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 +E GL+F +W +Q +L+ AL+ L G +V A +GYDS +AF MFK +G TP Y Sbjct: 184 QELGLTFTEWLRQKRLVHALELLASGHSVLDSALEIGYDSPSAFSAMFKSRIGLTPSEYT 243 Query: 257 ARL 259 A + Sbjct: 244 ASI 246 >UniRef50_D0J7G0 Transcriptional regulator, AraC family n=11 Tax=Proteobacteria RepID=D0J7G0_COMTE Length = 274 Score = 225 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 73/243 (30%), Positives = 123/243 (50%), Gaps = 1/243 (0%) Query: 22 FCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT 81 F + +P H HR G L A HG+++ V + PPQ+ VWIP GV HS + Sbjct: 31 FRYDEFGEHSEAPPHSHRWGHLNYAAHGSLSMDVPTGHILCPPQHGVWIPPGVVHSCYLQ 90 Query: 82 ANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFD 140 + +++ P +P T +++ P+ + ++ R RL +V+ D Sbjct: 91 HAVQYRSVYLAPDLCADLPQTAGCMRLGPIVKAVLADFGARGVQIPVTDADLRLARVVHD 150 Query: 141 ELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETG 200 +L P + LPV+ HP + +++ M P + +L +WA M+ER LAR +E G Sbjct: 151 QLRATPLELSFLPVARHPALVQVLDAMQSRPDDHRSLAEWAETVHMTERTLARHCQRELG 210 Query: 201 LSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260 +S +WRQ+++ + A+ L G TVQ++A+ LGY + +AFI MF++ G P ++ Sbjct: 211 MSLGEWRQRMRYLQAIDALEAGHTVQQIAYDLGYSTPSAFIAMFQRESGLPPEQFRREFC 270 Query: 261 TVS 263 S Sbjct: 271 ASS 273 >UniRef50_B7UVC2 Probable transcriptional regulator n=6 Tax=Pseudomonas aeruginosa RepID=B7UVC2_PSEA8 Length = 260 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 83/244 (34%), Positives = 131/244 (53%), Gaps = 3/244 (1%) Query: 19 AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78 AV +H+H GQL+ A G + + E ++VP Q A+WIP V H+ Sbjct: 19 AVYLRAFEMPAGHRVEMHEHPWGQLMYAASGTLRASTERHSYLVPAQRALWIPPRVRHAA 78 Query: 79 QVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL 138 + L+++ ++P C L++S L REL+L A RL+QV+ Sbjct: 79 EACNPVLFRSLYLD---RSLPGGCRVLEVSGLLRELLLRAAEFPREYPPGGEAERLMQVV 135 Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198 DE+ + + L+LP+ P++R + + + P + + WAG S R LARL ++ Sbjct: 136 ADEVGRLREAPLNLPLPGDPRLRRITDALQADPADPRGISDWAGLVGASRRTLARLFREQ 195 Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 T LSFR+WRQ+L+L+ A+ L +G +V +VA LGYDST+AFI++F++ GQTPG + Sbjct: 196 TQLSFREWRQRLRLLNAVAALEEGASVTRVASDLGYDSTSAFISLFQRHFGQTPGCFARS 255 Query: 259 LTTV 262 L Sbjct: 256 LRLP 259 >UniRef50_B1JGH9 Transcriptional regulator, AraC family n=26 Tax=Enterobacteriaceae RepID=B1JGH9_YERPY Length = 261 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 1/224 (0%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 H H GQLI G + ++ ++ PP++ VW+P G+EHS+ + I Sbjct: 32 PHTHPFGQLICVKSGVLAMSIGGQRFLAPPEFIVWVPAGMEHSSYNRKPMHFRAIDIALD 91 Query: 95 AVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153 T +P + + +SP+ ++ R RRL VL D+L P Q+ +LP Sbjct: 92 FCTELPASPGLMNVSPIFNAIVEDCFTRDLLMPETQQDRRLAHVLIDQLKVSPVQRTYLP 151 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 S + ++ + + P + +L WA +ER L+R +E G++F +WRQ+L+ + Sbjct: 152 TSQDKLLSPILAALERCPADSTSLALWAKRVYTTERTLSRRCQQELGMAFSEWRQRLRFL 211 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 A+ L +G TV VA +GY S +AFI MF++ G TP R+ Sbjct: 212 HAISLLEQGKTVNSVALDVGYSSASAFIAMFQQISGTTPERFRR 255 >UniRef50_A6V354 Transcriptional regulator, AraC family n=3 Tax=Pseudomonas RepID=A6V354_PSEA7 Length = 244 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 72/240 (30%), Positives = 117/240 (48%), Gaps = 4/240 (1%) Query: 19 AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78 A+A H G + L H H + QLI A+ G + W+VP +A+W+P EH Sbjct: 5 ALACDHHDGEEIL---PHCHAQAQLIHAISGVMLVGAARRNWVVPAGHALWVPPNTEHQI 61 Query: 79 QVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137 +++ + + LF+ + C + +SPL REL++ + + R + ++ Sbjct: 62 RMSGSVRMRTLFMPAATWPRDGEQCQVIAVSPLLRELLVAASEMHLGDSSAQRRRCIHEL 121 Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197 L EL +HL + P++ + + P E + WA MS R LARL + Sbjct: 122 LLVELDAAQTIGIHLVMPRDPRLLRLCSQVIGTPAEETRMEDWARQLNMSSRTLARLFQR 181 Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 E G+SF WR + +++++LQ L G +V +VA GY S +AF FK+ LG +P Y A Sbjct: 182 ELGMSFGDWRTRARMVLSLQRLSAGASVLEVALEHGYQSPSAFSQTFKRTLGHSPSHYQA 241 >UniRef50_Q13M62 Transcriptional regulator, AraC family n=4 Tax=Burkholderia RepID=Q13M62_BURXL Length = 266 Score = 224 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 83/257 (32%), Positives = 122/257 (47%), Gaps = 7/257 (2%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 MM ++ +G E AF I + L P+ R+ +LI A G + E W Sbjct: 17 MMDTVDPDGVE-------QPAFVIGEHHETLDEPLGAFRRARLIHASAGVLIVRTETGRW 69 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120 +VPP +A+WIP GV H T C L+ AV +P + L L+ A+ Sbjct: 70 VVPPGHALWIPAGVLHRLSATGPVRFCSLYAGADAVPLPFHSIAVVPDRLVAALLSAAAD 129 Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180 + + RL+QVL D LP P L L P+ + + ++ P + L Sbjct: 130 LPHDKPFDEPAARLVQVLLDRLPGLPVAPLGLNWPRDPRALRIADALSSNPADSAVLEDL 189 Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240 A ++ R ARL VKETG +F QWRQQL+L+ A++ L G +V +VA +GY ++F Sbjct: 190 AAAAGVTARTAARLFVKETGQTFGQWRQQLRLLAAVEHLGAGASVTQVAPEVGYSDVSSF 249 Query: 241 ITMFKKGLGQTPGRYIA 257 I +F+ G TP RY Sbjct: 250 IAVFRDAFGDTPARYFR 266 >UniRef50_C7MAZ5 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=2 Tax=Actinomycetales RepID=C7MAZ5_BRAFD Length = 261 Score = 224 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 80/250 (32%), Positives = 121/250 (48%), Gaps = 3/250 (1%) Query: 24 IHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTAN 83 IH + +P H H +G L+ G ++ E+ W+ PP A WIP G H ++ Sbjct: 14 IHLLGHDERTPSHVHEQGHLVYPASGVLSIVTEDGSWIAPPNRAAWIPAGSFHQHRAHGA 73 Query: 84 AELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDEL 142 ++ +F+ +A + P L ++PL RE L L + R RL +V+ D+L Sbjct: 74 TDMRIVFMADAAAGLLPAHPSVLAVTPLAREATLALT--SDVPRTAESRERLRRVIIDDL 131 Query: 143 PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202 P+Q LHLP ++R + ++ + + L Q ER L+RL + TG+S Sbjct: 132 TAAPEQPLHLPEPRDERLRALTHLVEQEMEDPATLEQLGRRIGAGERTLSRLFQQTTGMS 191 Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262 FRQWR QL++ AL L G +V A G+ + +AFI F +GQTPGRY L Sbjct: 192 FRQWRIQLRIHRALLLLTDGLSVVDTATACGWANPSAFIDAFTALVGQTPGRYQRSLRGA 251 Query: 263 SPQSAKPDPR 272 S + PR Sbjct: 252 SSPLPETPPR 261 >UniRef50_B0T088 Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. K31 RepID=B0T088_CAUSK Length = 249 Score = 224 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 80/223 (35%), Positives = 109/223 (48%), Gaps = 1/223 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP-S 94 H H GQL+ A G + + A W+VPP A+WIP G+ H A + L+I P Sbjct: 26 HAHVWGQLVFASAGVMRVATDAATWLVPPTKAIWIPAGLTHQILFGGEAAMRTLYIAPGR 85 Query: 95 AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 A T+PT L+++PL RELIL + P RL +L D + Q Q L LP+ Sbjct: 86 AATLPTEPQALEVAPLLRELILHILKIGMLTPQRPEHDRLAGLLIDLMRQARSQDLCLPL 145 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 + + + P E L AG F S R L R+ +ETGL+ WRQ+ +LI Sbjct: 146 PRDRRALALAIHLQARPDEERGLAALAGPFGASLRTLQRVFPRETGLTLETWRQKARLIH 205 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 ++ L G +V A GY S AFI F + TPGRY+A Sbjct: 206 SVACLTTGASVTDAALASGYRSVGAFIGAFTRQFEVTPGRYLA 248 >UniRef50_C0YIN0 AraC/XylS family transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YIN0_9FLAO Length = 260 Score = 223 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 67/251 (26%), Positives = 119/251 (47%), Gaps = 6/251 (2%) Query: 9 GYEPDRHHEAAVAFCIHAGTDELTSPVHQHR-KGQLILALHGAITCTVENALWMVPPQYA 67 ++ D HE V I + S H H K QL+ A G +T T + ++PP Sbjct: 9 DFDADSIHEQVVG--IASDMVMHDSGFHFHTTKAQLLYAPSGCMTVTTSDRQLILPPFRM 66 Query: 68 VWIPGGVEHSNQVTANAELCFLFIE--PSAVTMPTTCCTLKISPLCRELILTLANRTTTQ 125 +WIP H ++ + S M + L ++PL +E+I + Sbjct: 67 LWIPAHEVHRVNFRNIVAYRSIYFDVSYSRKYMKSDLKVLHVNPLLKEIIERICFWEWPA 126 Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185 + T L++V +DE+ + P+++L L + + + E L A Sbjct: 127 LSNDQTN-LLKVFWDEMSKAPEEKLELKMPQDKRFTKIAEEWTLRQSVPPMLKDLAQKAG 185 Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245 +E+ ++R+ KETGLS++ WRQQ +L +++ L +G+++ +V++ L + S +AFI FK Sbjct: 186 AAEKTISRIFKKETGLSYQDWRQQWRLQRSIELLAEGNSIGEVSYILDFPSDSAFIEFFK 245 Query: 246 KGLGQTPGRYI 256 K G TP +Y+ Sbjct: 246 KHTGTTPLQYL 256 >UniRef50_Q5E435 Transcriptional regulator, AraC family n=3 Tax=Vibrionaceae RepID=Q5E435_VIBF1 Length = 271 Score = 223 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 4/237 (1%) Query: 22 FCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT 81 F + A T+ L+ H H GQL L G + V+ P YA+W P + H Sbjct: 33 FFLEAKTETLS---HSHPWGQLHLIKQGRLEMEVDKQKMFCPANYAIWTPAHLLHRAFNH 89 Query: 82 ANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFD 140 + E C + IE +PT+ C ++PL R ++ L R TT+ + L VL + Sbjct: 90 NDVEYCAINIEFELSQKLPTSACMFPLTPLLRAIVDDLVERQTTEVLSTEDKYLSHVLIE 149 Query: 141 ELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETG 200 L + + +LP + + ++ + + P + +L WA +ER LAR KE Sbjct: 150 RLSKTNPIENYLPFTDDKLLAPILMQLQENPADDSSLEIWAKRVFSTERTLARRFQKELK 209 Query: 201 LSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 +SF WRQ+ +L A+ L ++ ++A+ LGY ++FI MF+K G TP ++ Sbjct: 210 MSFNDWRQRAKLAKAMVLLKDAISINEIAYQLGYSQGSSFIKMFRKHTGVTPEQFRK 266 >UniRef50_A6V4X5 Probable transcriptional regulator n=7 Tax=Pseudomonas aeruginosa RepID=A6V4X5_PSEA7 Length = 254 Score = 223 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 67/245 (27%), Positives = 106/245 (43%), Gaps = 1/245 (0%) Query: 15 HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGV 74 A F + + H H GQL G + E +PP+ WIP G Sbjct: 4 EPLPAPLFALRLDRATSRTAPHSHACGQLYCLERGLLVVEDERGRQALPPRQIAWIPPGH 63 Query: 75 EHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRR 133 H+ +++ S +P + L S ++ Sbjct: 64 RHAAHSHGALLGWSAYLDTSHCHALPASPGVLACSDFVALIVERATRWPAGSAWSAEREN 123 Query: 134 LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193 L++VL DEL Q+ LP P++R + E + P + +WA + +S R+L+R Sbjct: 124 LLRVLLDELRHAVPQRTRLPYPGDPRLRRIAEALLANPGDPRPAAEWARWAGLSSRSLSR 183 Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253 L ETG+SF QWRQ +L A++ L G V +VA +LGY+S ++F + F+ G+TP Sbjct: 184 LFGTETGMSFAQWRQLARLHAAVERLAAGQAVGEVAWSLGYESPSSFASAFRAVFGETPS 243 Query: 254 RYIAR 258 Y +R Sbjct: 244 GYSSR 248 >UniRef50_C1MBM6 Transcriptional regulator n=2 Tax=Citrobacter RepID=C1MBM6_9ENTR Length = 261 Score = 222 bits (567), Expect = 8e-57, Method: Composition-based stats. Identities = 66/241 (27%), Positives = 104/241 (43%), Gaps = 2/241 (0%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 V F + P H H Q A G++ V W++P Y +WIP EH Sbjct: 21 PQDVFFRSYVLEANHHVPQHSHSFMQFHFARKGSMRIDVAGKCWIIPAHYGIWIPNNTEH 80 Query: 77 SNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLAN-RTTTQRAEPMTRRL 134 + + L L I+P + C + IS RE I N + ++ +L Sbjct: 81 AVWALDDVYLENLDIKPGFLEESINECKVVAISDFAREFIHYATNSISGHYDSQSKEGKL 140 Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 + VL D + Q P+ LP ++ + + + P ++ WA MS R +R Sbjct: 141 VSVLVDIILQLPEVAFVLPWPQDRELTKVCRTIQESPALEHSVEYWAQHLGMSARTFSRH 200 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 KETGL F W+Q+++++ ++ L K +V VA +GY ST AF F++ G P Sbjct: 201 FKKETGLPFSVWKQKMRILESVLMLKKNKSVTAVALDVGYSSTAAFSYAFRQAFGVPPSN 260 Query: 255 Y 255 Y Sbjct: 261 Y 261 >UniRef50_C8Q2C9 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8Q2C9_9ENTR Length = 261 Score = 222 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 80/239 (33%), Positives = 123/239 (51%), Gaps = 6/239 (2%) Query: 22 FCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT 81 HAG +E H H QL+L L G + A W + P A+W+PG V H+ Sbjct: 23 MHYHAGREER---WHAHEVAQLVLCLQGVMRVQTHTASWTLTPGRALWLPGTVPHALTAL 79 Query: 82 ANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ-VLF 139 ++ L++EP A ++ ISPL + L+ TL +P+ LI +L Sbjct: 80 SDIRSLSLYLEPVVARAFWPEARSMMISPLLQALMQTLVEIGLQPHPDPLRAELITPLLL 139 Query: 140 DELPQQPQQQLH-LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198 DEL + P+ + LP+ + ++ + + + + P L +W S R LARL + Sbjct: 140 DELRRAPEGPVCVLPLPADRRLMNICQQLLQSPASSDTLEEWGSRVGASSRTLARLFRDQ 199 Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 TG++F QWRQQL+L AL L +G V ++A LGY S +AFI+MF++ LG TP R++ Sbjct: 200 TGITFTQWRQQLRLSEALVQLAQGQPVLRIASQLGYQSPSAFISMFRRLLGDTPQRFLR 258 >UniRef50_D2B3A1 AraC family transcriptional regulator n=5 Tax=Actinomycetales RepID=D2B3A1_STRRD Length = 265 Score = 222 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 75/238 (31%), Positives = 120/238 (50%), Gaps = 5/238 (2%) Query: 20 VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79 V + + SP H H QL G ++ V++A W++PP A+W+P GV H Sbjct: 24 VVGHFPLSSGQWISP-HSHTHHQLAWTRSGVLSVAVDDAYWVLPPTRALWLPAGVVHRTG 82 Query: 80 VTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL 138 T +A LC L++ P T+ T + ++ L LI LA A R V+ Sbjct: 83 ATRDALLCSLYLNPVRCTLNWTEPTAVGVNGLLAHLIAYLAREDLADDA---RLRAEAVV 139 Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198 D L P + +P ++R + + + P + +L A +S R L RL V++ Sbjct: 140 LDLLHPLPALPIDVPRPVDERVRAVADTLLADPSDSRSLEAHARSIGVSRRTLTRLFVRD 199 Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 TGLSF +WR ++L AL L +G V +V+HT+GY + +AF+ F++ +G +PGRY+ Sbjct: 200 TGLSFDRWRTHMRLRAALPLLAEGRPVSQVSHTVGYATPSAFLAAFRRTVGTSPGRYL 257 >UniRef50_A4CF02 Transcriptional regulator, araC family protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CF02_9GAMM Length = 265 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 2/250 (0%) Query: 10 YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69 + PD + H H QL + G + + L++VPPQ A+W Sbjct: 16 HYPDGLPHPVMPLSSEFSPMTQVI-KHAHPWSQLAYSSQGILQIETDQGLFVVPPQQALW 74 Query: 70 IPGGVEHSNQVTANAELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAE 128 +P + H L L + + TL + PL + LIL + + + Sbjct: 75 LPPNMTHQITCQCPTRLRSLHFQDHITAPLGDAIQTLAVGPLLQALILEVCHWGRDYQLS 134 Query: 129 PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSE 188 +R+I VL D+L P+Q +P + +++ +V P L +A S Sbjct: 135 TEKQRVIDVLVDQLVSAPKQDFFIPNITDKRLQPIVSHFNHHPESKRTLNDFANQVGAST 194 Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGL 248 R L RL + + F QW+Q+++++ AL L + ++ +A TLGYDS ++FI FK+ + Sbjct: 195 RTLHRLFLLNFAMGFNQWKQRIRVLKALTLLDQDLPIKDIAATLGYDSDSSFIAAFKQQM 254 Query: 249 GQTPGRYIAR 258 G P +Y + Sbjct: 255 GLPPKQYRKQ 264 >UniRef50_Q28MP8 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28MP8_JANSC Length = 270 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 77/248 (31%), Positives = 116/248 (46%), Gaps = 2/248 (0%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 V + TD L P H H K QLI A+ G + + + +PP A+ +P Sbjct: 23 DRPIVGYAKDYPTDHLALP-HTHPKAQLIYAVSGVMHVDTGTSSYTLPPTTALLMPANRA 81 Query: 76 HSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134 HS + + LF++ ++ + C + +S L +ELIL + + Sbjct: 82 HSIYMDGPVAMRALFLQQKQPSVDLSACKVVSVSALLKELILAACDEPVEWEQTGRAPHI 141 Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 + + E+ Q L LP+ + P+I + + + P + +L WA F SER LARL Sbjct: 142 VALALHEIAQAVNLPLGLPLPTDPRIARVTDALRMRPADSRSLQDWALFAGASERTLARL 201 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 KETG++F QWR Q +L AL L +G T+ A GYDS AF F++ GQTPG Sbjct: 202 FRKETGMTFNQWRGQARLTAALSALSQGRTLAHAAAVAGYDSQPAFGAAFRRAFGQTPGE 261 Query: 255 YIARLTTV 262 A+ T Sbjct: 262 ARAQHATR 269 >UniRef50_A5F0T8 Transcriptional regulator, AraC/XylS family n=40 Tax=Vibrionaceae RepID=A5F0T8_VIBC3 Length = 263 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 74/246 (30%), Positives = 119/246 (48%), Gaps = 1/246 (0%) Query: 15 HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGV 74 H + V A + H H GQ+ L G + E+ ++ PP A+W+P G+ Sbjct: 16 HPPSDVFMNFEAFLSNTETREHSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAGI 75 Query: 75 EHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRR 133 H + E C L I P +K++ + +I R +R Sbjct: 76 RHRSYNRKPIEYCSLNIASQLTTAFPAKTSLIKVTSIVSAIIDDFRERNINVAQSSEDKR 135 Query: 134 LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193 L+QVL D+L + Q LP ++H + ++ + + P + L QWA +ER LAR Sbjct: 136 LVQVLLDQLATRETQHHFLPSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLAR 195 Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253 E G+SF +WR +++ + +++ L +G V++VA TLGY+ + FITMFKK G TP Sbjct: 196 HCQAELGMSFTEWRLRVRYLYSMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTPE 255 Query: 254 RYIARL 259 +Y +RL Sbjct: 256 QYKSRL 261 >UniRef50_A1BBK0 Transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria RepID=A1BBK0_PARDP Length = 262 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 83/245 (33%), Positives = 110/245 (44%), Gaps = 2/245 (0%) Query: 13 DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72 D VA + D HQHR+ QLI A G I A W+VPP VWIP Sbjct: 10 DHAPRPIVAIG-NDYPDGFVIQPHQHRRAQLISAATGVIVLATPEATWVVPPNRGVWIPP 68 Query: 73 GVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131 H ++ + + L+IEP AV MP+ C L IS L R LI N Sbjct: 69 ATRHHVRIVGDVGMQSLYIEPGAVPGMPSHCQVLGISALMRSLIAEALNLPLEYDQHGRD 128 Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191 L++++ E+ P L LP S P++ A+ P W+ MS R+ Sbjct: 129 GVLMELIRLEMGGLPALPLSLPFPSDPQLSRRCRAFAEKPAIHETTDDWSRALGMSRRSF 188 Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251 R +ETG SF WRQQ L+ A+ L G+ V VA LGY++ AF MFK+ G Sbjct: 189 TRFFRRETGASFMAWRQQACLLYAMPRLAAGEAVTTVAMDLGYENPAAFTIMFKRTFGSP 248 Query: 252 PGRYI 256 P Y+ Sbjct: 249 PLAYL 253 >UniRef50_Q0TI30 Transcriptional regulator, AraC family n=14 Tax=Enterobacteriaceae RepID=Q0TI30_ECOL5 Length = 271 Score = 221 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 72/234 (30%), Positives = 113/234 (48%), Gaps = 5/234 (2%) Query: 32 TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91 T P H+H QL+ G + ++W+V A+W+P + H T N L + + Sbjct: 27 TVPWHKHLYAQLLYPAEGVVRIWAGESVWLVHASSALWLPPQMPHKFVATGNVLLKTVLV 86 Query: 92 -EPSAVTMPTTCCTLKISPLCRELILTLANRTT----TQRAEPMTRRLIQVLFDELPQQP 146 E + T+ C ISPL REL++ + T + + L ++ E+ Sbjct: 87 SEAESETLGKVCFMTGISPLLRELLIAINQLPPSQSTTDKQQLRFSALETLILQEIKMGV 146 Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206 + L LP + +++ + E + L A +S R L RL VKETGL+FR W Sbjct: 147 KMSLELPWPNDERLQQLCENLLNNQGYLPTLDNLADKINVSSRTLMRLFVKETGLTFRHW 206 Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260 QQ+ +I A+ L G ++ K+AH LGY S +F MFK+ G +PG++ RLT Sbjct: 207 VQQMHVISAVTLLDDGYSLTKIAHRLGYASAESFGNMFKRRTGYSPGKFTRRLT 260 >UniRef50_C5CUS1 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CUS1_VARPS Length = 280 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 78/267 (29%), Positives = 128/267 (47%), Gaps = 7/267 (2%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 + L + Y PD H + + +HQH QL + G I + ++ ++ Sbjct: 14 VASLTPHLYAPDAVRPLRAKE--HFLSADTFVELHQHPWPQLTFSTRGVIRLSTQDGSYI 71 Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN- 120 VPP AVW+P + HS + +AEL +++ C L+ISPL R L+L L Sbjct: 72 VPPSRAVWVPANMPHSIMLIEDAELRTVYLHAWLGPPWEKCEVLEISPLLRALMLALDTT 131 Query: 121 ---RTTTQRAEPMTRRLIQ-VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGA 176 P R+I +L DEL + Q ++ +P+ S ++R + E + + P + Sbjct: 132 PDGLPPADPHAPQRERMIAPLLVDELERATQIRIDVPLPSDKRLRQLCETLLRNPADRAT 191 Query: 177 LGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDS 236 L + A SER +ARL + G+S++QWRQQ + AL L +G V +VA GY + Sbjct: 192 LAERAAAIGASERTVARLFRDQLGMSWQQWRQQAVMAHALPLLARGMAVSQVAAASGYAT 251 Query: 237 TTAFITMFKKGLGQTPGRYIARLTTVS 263 +AF MFK G++P + + + + Sbjct: 252 DSAFCAMFKAATGRSPTSFQHKKRSAA 278 >UniRef50_C4WMA6 AraC family transcriptional regulator n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WMA6_9RHIZ Length = 249 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 84/242 (34%), Positives = 123/242 (50%), Gaps = 2/242 (0%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 A I P H+HR QLI A G +T EN W+VPP AVW+P VE Sbjct: 8 PLALAISTIAQDDASFAGPPHRHRDAQLIYARSGVVTVATENGSWVVPPNRAVWVPPMVE 67 Query: 76 HSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134 H+ + + +FI P A +P++C +++S L RELIL L + A P R+ Sbjct: 68 HATRSHGPVQFRTIFIHPDAARSLPSSCGVVEVSSLLRELILRLVEL-QDRPATPFAHRV 126 Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 ++L +EL P + L L + S ++RT+ + + P +L A MS R+ R Sbjct: 127 CELLLEELTFLPAEPLSLSMPSDHRLRTLCQTLQAEPDTELSLDAAASRTGMSRRSFMRH 186 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 +ETG+++ +WRQQ +L+ AL L G V VA GY S +AF FK+ LG++P Sbjct: 187 FERETGMTYGRWRQQARLLAALPALAAGVPVVTVALDCGYQSASAFAATFKRSLGRSPAS 246 Query: 255 YI 256 Y Sbjct: 247 YF 248 >UniRef50_C9NXQ1 Transcriptional regulator AraC family n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NXQ1_9VIBR Length = 243 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 69/226 (30%), Positives = 111/226 (49%), Gaps = 2/226 (0%) Query: 32 TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91 + HQH QL G T + W + P WIP ++H + V A+ E +++ Sbjct: 16 ETEWHQHEYAQLYWLNKGIFTIETSDQQWTITPACLGWIPPHLQHRSDVVADIEAVMIYV 75 Query: 92 EPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150 + + P ++ + L + LI + + + P R+ QVL DE+ P L Sbjct: 76 PLTWLNAFPQQAKVIQSNTLIQALIERITHFDLSAMTAPQQRQF-QVLLDEIHLAPASNL 134 Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210 +LP+ K+R + + + P + + + A F S R L+RL KETG++F WRQQ Sbjct: 135 YLPLPKEAKMRQIADTLLATPDDARSQTELAHDFGTSTRTLSRLFKKETGMAFGFWRQQA 194 Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 +L+ +L L KG ++ VA + GY +T++FIT FK G TP Y Sbjct: 195 RLVSSLPMLEKGLSITYVALSCGYSNTSSFITAFKARFGVTPSVYF 240 >UniRef50_B9JII8 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JII8_AGRRK Length = 276 Score = 220 bits (560), Expect = 4e-56, Method: Composition-based stats. Identities = 75/255 (29%), Positives = 114/255 (44%), Gaps = 5/255 (1%) Query: 7 LNGYEPDRH----HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMV 62 NG+E + H A V T P H HR+ QL+ G I WMV Sbjct: 13 DNGHEQNMHWTEASNADVLVHSSEPQQGYTVPWHHHRRSQLLCVFAGVILILTTRGRWMV 72 Query: 63 PPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTT-CCTLKISPLCRELILTLANR 121 PP +A++IP G+EHS ++ ++ + +++ P ++++ L R L+L Sbjct: 73 PPGHALFIPAGLEHSVEMLSDVSMKSVYVMPHDPRQSDEAPRVVEVTDLARSLLLEAIRL 132 Query: 122 TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWA 181 ++ +L +E+ ++ L LP S ++ + P L WA Sbjct: 133 REAPVGNRKAELVLSLLLEEISTLEERPLGLPFPSDRRLAALCRAYLANPTPNARLDDWA 192 Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241 AMS R R KETG+SF WRQQ + L L +G V VA GY+S AF Sbjct: 193 EKLAMSRRTFTRQFRKETGISFTTWRQQASVFACLPQLAEGQPVTNVALEAGYESAAAFT 252 Query: 242 TMFKKGLGQTPGRYI 256 TMF++ LG +P Y+ Sbjct: 253 TMFRRMLGTSPRTYM 267 >UniRef50_Q4KJ22 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria RepID=Q4KJ22_PSEF5 Length = 262 Score = 220 bits (560), Expect = 5e-56, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 117/242 (48%), Gaps = 1/242 (0%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 A V F + H+H G L + HG + + +M PPQYAVW+P H Sbjct: 15 PAPVYFRYADFAAHSHALEHRHPWGCLEYSAHGVMHMEIAGQRFMSPPQYAVWVPPQTPH 74 Query: 77 SNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135 S + + P +P TL IS + + ++ A R +RL Sbjct: 75 SFYTAQPINYRAVLLAPELCAELPAGGSTLAISEILKAILKDFAARDVQIPEGEADQRLA 134 Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 QVL D+L Q P +LP +S P + +++ + P L WAG +SER LAR Sbjct: 135 QVLLDQLRQAPVHTCYLPYASSPDLLRVLQALQAEPGNNQPLAHWAGLAHVSERTLARQF 194 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 V+E G+SF +WRQ+ + + +++ L ++Q++A +GY S +AFI MF++ G TP +Y Sbjct: 195 VRELGMSFGEWRQRQRFLASIEALESSRSIQEIAFDMGYSSASAFIAMFQRQAGSTPEQY 254 Query: 256 IA 257 Sbjct: 255 RR 256 >UniRef50_C3JKZ1 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus erythropolis RepID=C3JKZ1_RHOER Length = 267 Score = 219 bits (559), Expect = 7e-56, Method: Composition-based stats. Identities = 77/265 (29%), Positives = 120/265 (45%), Gaps = 9/265 (3%) Query: 6 NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65 N++ + D +A H+HR+ Q + A++GA+ E+ W V P Sbjct: 3 NISINDVDHSPRGVLAIGTDY-PPGHVLAAHEHRRAQFLFAVNGAMNVETEDGEWTVLPS 61 Query: 66 YAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTT- 123 AV IP GV H+ + L+IEPSA P C + +S L REL++ + Sbjct: 62 NAVMIPAGVAHAVTMDG-VSTRSLYIEPSAAPWFPVRCRVVAVSSLLRELLVAAVDMDVE 120 Query: 124 -----TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALG 178 A + ++Q++ EL + LP+ HP +R + P + Sbjct: 121 LNVEDDSPAHGRSAAVLQLILHELRDLAPLPVELPLPRHPGLRALCAQYLAAPSIHDSPT 180 Query: 179 QWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTT 238 +WA +SER L RL++ ETG+S W Q+ ++ AL L G +V +A LGY + Sbjct: 181 RWADRLHVSERTLHRLLISETGMSASSWMQRACILHALPKLSAGASVTAIASELGYSTPA 240 Query: 239 AFITMFKKGLGQTPGRYIARLTTVS 263 AF M + G P Y AR+TT + Sbjct: 241 AFAAMCTRVSGAPPSSYRARVTTQT 265 >UniRef50_D1X8C9 Transcriptional regulator, AraC family n=2 Tax=Streptomyces RepID=D1X8C9_9ACTO Length = 304 Score = 219 bits (559), Expect = 7e-56, Method: Composition-based stats. Identities = 73/242 (30%), Positives = 115/242 (47%), Gaps = 3/242 (1%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 H+ + H+H Q++ A G +T T W+ P A+W+P G Sbjct: 63 HDPVAPTRTRRLAPGGSIDAHRHDDHQIVYAGRGVLTVTTSAGSWVAPATRAIWVPAGTV 122 Query: 76 HSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134 H+++ +L + + + + T L +SPL REL++ R E RL Sbjct: 123 HAHRAYGELDLHLVGLPVTENPLGLETPTVLAVSPLLRELLIAYTRAEDDDRPE--RARL 180 Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 VL D+L QQ LHLP + P +R + +++ P + L + S+R L+RL Sbjct: 181 RAVLLDQLRASAQQPLHLPTPTTPLLRALCDILRADPADSRTLAELGHLVGASDRTLSRL 240 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 + G++F QWR QL+L AL L + V VAH G+ ST+AFI +F++ G TPG Sbjct: 241 FRSDLGMTFPQWRTQLRLHHALILLTERTPVTAVAHQCGWSSTSAFIEVFRRTFGHTPGS 300 Query: 255 YI 256 + Sbjct: 301 HR 302 >UniRef50_Q01YV9 Transcriptional regulator, AraC family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01YV9_SOLUE Length = 257 Score = 219 bits (558), Expect = 8e-56, Method: Composition-based stats. Identities = 69/230 (30%), Positives = 106/230 (46%), Gaps = 3/230 (1%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 + H+H QL+ A+ G++T W++PP AV+IP HS ++ + Sbjct: 27 SSGYQMEEHEHPWRQLLYAISGSMTVYAGRWSWIIPPGKAVFIPADCRHSMRMWGQVAMR 86 Query: 88 FLFIEPS---AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ 144 L+ + + C L ++PL RELIL + P RL +L DE+ Sbjct: 87 SLYFPAAWEVSAFASPECFVLSVTPLLRELILRVIEWAALDSRVPEHARLAALLVDEIAC 146 Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204 P L LP+ + + + + P +L A A R L RL ETG+SF Sbjct: 147 APVTPLLLPLPIDARAAAVAQSVLASPARNDSLDDLARRHATGRRTLERLFRDETGMSFG 206 Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 WRQQ +L+ ++ L +G V + A GY S +A+I FK+ G TPG+ Sbjct: 207 MWRQQARLLHSVGALAEGKPVTEAALDAGYASLSAYIAAFKRTFGCTPGK 256 >UniRef50_A8GAI3 Transcriptional regulator, AraC family n=2 Tax=Serratia RepID=A8GAI3_SERP5 Length = 257 Score = 219 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 69/232 (29%), Positives = 110/232 (47%), Gaps = 2/232 (0%) Query: 31 LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLF 90 +P HQH +GQL L HG I + W + W+P H N L+ Sbjct: 14 HLTPWHQHTRGQLYLLTHGMIALETQEQQWAMTAGSIGWLPANCAHQALACGNVAGWSLY 73 Query: 91 IEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ 149 + S +P S L L+ LA QR RRL+QVL DE+ Q Sbjct: 74 LPGSLCADLPKQPHLSTASGLILALVERLAQF-AGQRLNAPQRRLLQVLLDEMCAQESTP 132 Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209 L LP+ ++ + + P + +WA + +S R L+R + ETG++F +WRQQ Sbjct: 133 LQLPLPQDARLLKIARALLNEPASERSQSEWAAWTGLSVRTLSRHFISETGVTFARWRQQ 192 Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTT 261 +++ +L+ L +G+ + ++A GYD+ +A+I F++ G TPG Y + T Sbjct: 193 ARVLRSLEPLSRGEAINQIAGDCGYDNVSAYIAAFRQRFGTTPGLYFVQRET 244 >UniRef50_Q47UH5 Substrate-binding transcriptional regulator, AraC family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47UH5_COLP3 Length = 272 Score = 219 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 2/240 (0%) Query: 19 AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78 V I HQH Q+ G + V ++ +++P ++IP H + Sbjct: 20 QVTAKIEQMAKGYIDRWHQHPWHQIAFPFEGILQTKVADSQFVIPHSGMLFIPANTPHES 79 Query: 79 QVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLAN-RTTTQRAEPMTRRLIQ 136 V + + +++ P P T + ++P REL+L + + + + +E +L+ Sbjct: 80 FVVTDTKFIGIYLNPQFQNHFPLTAKAISVTPFLRELVLHINHGVSNSIVSEEELSKLVA 139 Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196 VL D++ Q+ L + S ++ + + + P L WA SER L+RL Sbjct: 140 VLIDQISSGESYQMKLLLPSDRRLMIIFKALMTDPQLNTKLSDWAKQVGASERTLSRLFT 199 Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 KE G++F WRQ L+L+ +L L +VQ++A +GY++ ++FI FKK QTP +Y Sbjct: 200 KELGMTFPLWRQHLRLVSSLNLLETNLSVQEIAFKVGYNADSSFIYAFKKLFQQTPQQYR 259 >UniRef50_C7JHN7 Transcriptional regulator AraC n=8 Tax=Acetobacter pasteurianus RepID=C7JHN7_ACEP3 Length = 265 Score = 219 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 1/234 (0%) Query: 30 ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89 T+ H H GQ+ + G + ++A W++ P+ +W+P + H + L Sbjct: 32 RRTTVPHVHNNGQIFVVESGVMAVKTQDAYWLIGPEQLLWLPPRLAHEARSHGAITGWSL 91 Query: 90 FIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQ 148 +I + + + L + L+ T + T L + +DE P Q Sbjct: 92 YIAEDRCAFLVSKPFVADSTRLLSAQVERLSQNTQDTTWDARTACLAESFWDEFLSIPHQ 151 Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208 L LP +++ + + + P + WA MS R+ R +TG+ F WRQ Sbjct: 152 SLSLPFPGDVRLKRVADALCANPADSRGQQDWADMAGMSLRSFVRYFTADTGMQFSAWRQ 211 Query: 209 QLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262 +L+++ A + L +G+ V VA +GY+S AF FKK G +P Y R T Sbjct: 212 RLRILNAQEKLARGENVTHVAAAVGYESLGAFAAAFKKNTGYSPSTYAQRCMTR 265 >UniRef50_Q2KXY1 AraC-family transcriptional regulator n=5 Tax=Proteobacteria RepID=Q2KXY1_BORA1 Length = 274 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 109/261 (41%), Gaps = 3/261 (1%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 PD + + + + H H Q++ A+ G + T E + + P A W+P Sbjct: 14 PDVLSPSPMTMRVQSIGARNYFAAHTHEWHQVVYAVSGVLMVTAEGRSFAISPNQAAWVP 73 Query: 72 GGVEHSNQVTANAELCFLFI--EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129 G EHS AE L++ P +S L + L++ A Sbjct: 74 SGTEHSVGSFLGAEYRSLWLADHPGGTLSKGGVAVFGVSALLKALLVEAATLQGNPDESG 133 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 R+ +++ D+L + L L + +RT+ E + P + W MS R Sbjct: 134 YFGRIYRLVLDQLCRASPISLVLAWPASAALRTLCETLYNQPADPRGPDDWGRELGMSGR 193 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 LAR ETGL+ R WR+QL+L A++ L G V +A LGY S ++FI F+ + Sbjct: 194 TLARKFFAETGLTLRDWRRQLKLFRAIELLESGLDVTAIALELGYGSASSFIFAFRSAMK 253 Query: 250 QTPGRYIARLTTVSPQSAKPD 270 +P Y R+ P A + Sbjct: 254 CSPMAY-KRIRARDPAGAPGE 273 >UniRef50_A8T3D4 AraC-type DNA-binding domain-containing protein n=5 Tax=Vibrionales RepID=A8T3D4_9VIBR Length = 266 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 68/238 (28%), Positives = 119/238 (50%), Gaps = 2/238 (0%) Query: 20 VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79 + + A + S VH H K QLI + HG +T T+E+ +++PP A WIP G H+ Q Sbjct: 18 LVIGVAAEISDHDSGVHFHAKDQLISSQHGCMTITLEDVKYVLPPMRAAWIPRGTSHNAQ 77 Query: 80 VTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL 138 T A+ L+ +PS A +P ++PL R LI ++ + E + + Sbjct: 78 STNVAQYRSLYFDPSLASRLPRKIRIFDVTPLMRILIDRMSFWPF-DKPESEQINTLNLF 136 Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198 +EL L LP+ ++++ + + +L + + SE+ + R+ +E Sbjct: 137 IEELNDSEDVYLQLPLPKDYRLQSWISKIDDEAFSAPSLAKLSQLVGASEKTITRIFNRE 196 Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 TG+ ++ WRQQ +L+ A++ L G + +AH L + S +AFI F++ G TP Y+ Sbjct: 197 TGMPYQSWRQQWRLLGAIELLSSGMRLSDIAHRLEFSSDSAFIYFFRQKTGTTPMSYL 254 >UniRef50_A9ILC9 Transcriptional regulator, AraC family n=3 Tax=Bordetella RepID=A9ILC9_BORPD Length = 308 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 69/231 (29%), Positives = 106/231 (45%), Gaps = 1/231 (0%) Query: 30 ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89 + P H+H KG L+ G + + + P W+P G+ H +A FL Sbjct: 78 GIAVPAHRHDKGMLLAVREGVSVVRSDGEVLTMTPGRLGWMPPGMLHEAHWFGDARGLFL 137 Query: 90 FIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQ 148 ++ A +P C PL L+ LA ++ T RL +VL EL PQ Sbjct: 138 YVRADACDSLPAQACAWASGPLVEALLQRLAGIPPDEQNLAHTLRLFEVLVAELRILPQA 197 Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208 L LP+ ++ + + P + + WA MS R L R ETG++ +WRQ Sbjct: 198 SLPLPMPRDHRLHELATTLLDRPDDARGIEAWARRVNMSSRTLMRRFRAETGITLGRWRQ 257 Query: 209 QLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 Q +L+ +L+ L G V + A +GY+S +AFI+ F+ G TP +Y AR Sbjct: 258 QARLLRSLEWLAAGKPVTEAALAVGYESISAFISSFRNAYGVTPSQYFARH 308 >UniRef50_C8QEY4 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QEY4_9ENTR Length = 260 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 65/246 (26%), Positives = 118/246 (47%), Gaps = 1/246 (0%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 P + H + H H GQL HG + ++ ++ P QYAVWIP Sbjct: 8 PHLQEFPGDLYFRHDRLPAMEWKTHAHPWGQLNYVSHGVMHLEIDGIRFLSPSQYAVWIP 67 Query: 72 GGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130 +H + + + ++I + +P+ TL +SP+ ++ A R Sbjct: 68 PFADHFSFASRDLVYRTVYISLKLSNRLPSKPTTLNVSPVLHAILDDFALRDVRVPETEE 127 Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190 R+ QV D++ + +LP + ++ ++++ + P + ++ +A M+ R Sbjct: 128 DLRMAQVALDQILHIKPHETYLPYAVSDELNSVIKELQLNPGDRRSVEDFAEQLHMTSRT 187 Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250 L R +E G+SF +WR +L+ + A++ L G TVQ++A LGY + +AFI MFK+ G+ Sbjct: 188 LERRCQRELGISFGEWRSRLKFMHAIESLEAGLTVQRIALELGYTTPSAFIVMFKRFTGK 247 Query: 251 TPGRYI 256 TP +Y Sbjct: 248 TPEQYR 253 >UniRef50_Q2BQ21 Transcriptional regulator, AraC family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQ21_9GAMM Length = 235 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 70/231 (30%), Positives = 111/231 (48%), Gaps = 1/231 (0%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 + P HQH QL+ A G + V +PP+ AVWIP G EH + L Sbjct: 2 PPQHFFPKHQHEWHQLLYATSGVLIVEVLGERLFIPPEKAVWIPQGHEHQVYSEYGSSLK 61 Query: 88 FLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146 L+IE + T LKI+PL ++LIL + + + LI ++ L + Sbjct: 62 SLYIEHSDQFSDWQTSKVLKITPLLKQLILEASTFSVHYSRQGYEAELIALMLASLHRLE 121 Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206 LP + + + +M + P + A ++S+R L R +KETG+S +QW Sbjct: 122 TDHDQLPWPASRDLYRLCQMFYEQPSLRKTTAKLAIELSVSKRTLERKFMKETGMSVQQW 181 Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 QL+ + +L+ L G ++ +A LGY S+ AFI MF+ G +PG++I Sbjct: 182 LLQLRFLKSLELLSAGYSITHIALELGYGSSAAFIHMFRDKTGVSPGQFIK 232 >UniRef50_D1XHM7 Transcriptional regulator, AraC family n=1 Tax=Streptomyces sp. ACTE RepID=D1XHM7_9ACTO Length = 271 Score = 217 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 76/243 (31%), Positives = 119/243 (48%), Gaps = 3/243 (1%) Query: 29 DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88 + +P H+H +G L+ G ++ W+ P VWIP G EH ++ ++ Sbjct: 25 HDERTPEHKHTRGHLVYPATGVLSLVTSVGSWIAPSNRVVWIPAGFEHRHRAHGRTDMRI 84 Query: 89 LFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147 +F+ PS + P L ++PL RE LTL +R RL +V+ D++ P+ Sbjct: 85 VFMAPSLAALLPAHPAVLVMTPLAREATLTLT--GAERRPAGARSRLRRVIIDDITTAPE 142 Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207 Q LHLP ++R +V ++ +G + LG+ ER L+RL +ETG+SF QWR Sbjct: 143 QPLHLPEPRDDRLRAVVALVEEGMSDPLTLGRLGHEVGAGERTLSRLFQRETGMSFPQWR 202 Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSA 267 QL++ AL L G +V A G+ + +AFI F +GQTPG+Y L + Sbjct: 203 TQLRVHHALLLLADGGSVINTATACGWANPSAFIDAFTALVGQTPGQYRRSLREEVARPG 262 Query: 268 KPD 270 Sbjct: 263 DDP 265 >UniRef50_Q7D3B7 Transcriptional regulator. AraC family n=2 Tax=Agrobacterium tumefaciens RepID=Q7D3B7_AGRT5 Length = 264 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 74/256 (28%), Positives = 128/256 (50%), Gaps = 1/256 (0%) Query: 15 HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGV 74 + A ++F + + ++ AL G + VE ++ PP YA WIP Sbjct: 9 ENPAPLSFRTESYEAGGIFEEKRQPWCKVGYALTGVMEARVEGKRFLCPPHYATWIPADA 68 Query: 75 EHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRR 133 H+ N + ++I+ MP T CTL +SPL + ++ A R T RR Sbjct: 69 VHACHNRENVKFVSIYIDRDLCAGMPETACTLALSPLIKAILADFAERRITVPQTEADRR 128 Query: 134 LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193 L VL D+L P+++ LPVS+ ++ +++ + P + +L +WA +E+ L+R Sbjct: 129 LAFVLVDQLLNAPRRESFLPVSNDDLLQPVIDALQADPGDRRSLSEWARLLQTTEKTLSR 188 Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253 + G+SF +WRQ+L+L+ +L + G +VQ +A TLGY+S +AFI MF++ G +P Sbjct: 189 RFLGHLGVSFNEWRQRLKLVASLSLIEDGKSVQSIAKTLGYNSPSAFIAMFRRLTGTSPT 248 Query: 254 RYIARLTTVSPQSAKP 269 + ++ P Sbjct: 249 NLRSTPARTIKAASTP 264 >UniRef50_A8GH45 Transcriptional regulator, AraC family n=18 Tax=Enterobacteriaceae RepID=A8GH45_SERP5 Length = 257 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 72/248 (29%), Positives = 115/248 (46%), Gaps = 1/248 (0%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 E V F H+H GQL+ G + + ++ PP++ +W Sbjct: 9 EALIPAPRPVQFRCEEFNARTEFQPHRHSWGQLMWVKAGVMVLRIGGQRFLAPPEFVLWA 68 Query: 71 PGGVEHSNQVTANAELCFLFIE-PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129 P +EHS A+ + I P MP C + ++P+ R + R Sbjct: 69 PAEIEHSCYNQRLAQCRMVDIALPLCAGMPVDPCLVSVTPIFRAIAEDFYARKQYIPQSK 128 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 RL + L D+L P QQ +LP S + ++E + P + +L WA +ER Sbjct: 129 QDLRLCRALIDQLHLSPVQQTYLPSSEDKFLAPVLEALEHCPSDNTSLAAWAARVYTTER 188 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 L+R ++ G+SF +WRQ+L+ + A+ L +G TVQ+VA +GY S +AFI MF++ G Sbjct: 189 TLSRRCQQDLGMSFSEWRQRLRFLHAVSLLEQGKTVQEVALEVGYSSASAFIVMFQQIAG 248 Query: 250 QTPGRYIA 257 TP R+ Sbjct: 249 TTPERFRR 256 >UniRef50_B3Q9E6 Transcriptional regulator, AraC family n=2 Tax=Rhodopseudomonas palustris RepID=B3Q9E6_RHOPT Length = 286 Score = 216 bits (550), Expect = 7e-55, Method: Composition-based stats. Identities = 76/240 (31%), Positives = 115/240 (47%), Gaps = 1/240 (0%) Query: 19 AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78 VA +E TS H HR+ Q IL + G E ++VPP + +WIP GV H + Sbjct: 38 PVAAMTATYPNESTSTRHLHRRDQFILQITGVTAMMTERGHFVVPPGHGLWIPAGVVHQS 97 Query: 79 QVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137 + E +++ P+ TC ++ S L L+ LI++ Sbjct: 98 RAWGEVEAQTIYVTPNRERKASDTCRLIRASSLIEALMDEAVRIPEIYDQNGRDGTLIEL 157 Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197 L E+ + P+ LH+ + P++ + + + P L WA +S R L RL + Sbjct: 158 LLTEIARMPEVTLHVQMPPDPRLAEICKAVLGDPSSNLTLDHWADKCGLSRRTLTRLFRR 217 Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 ETG SF WRQ+++L+ AL L G+TV VA +GYDS +AF MFK+ LG P Y+ Sbjct: 218 ETGQSFSGWRQRVRLLEALARLGAGETVTGVALDVGYDSPSAFAAMFKRELGSAPRHYLR 277 >UniRef50_Q2L001 AraC-family transcriptional regulator n=4 Tax=Bordetella RepID=Q2L001_BORA1 Length = 258 Score = 216 bits (549), Expect = 8e-55, Method: Composition-based stats. Identities = 75/247 (30%), Positives = 124/247 (50%), Gaps = 4/247 (1%) Query: 10 YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69 +E H A +A G P H HR+ QL+ A+ G + W+VPP VW Sbjct: 13 FERTEHPVAVLAADYPQGAR---IPRHCHRRAQLLYAVEGVMIVEARAGRWVVPPTRGVW 69 Query: 70 IPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAE 128 + G+EH +++ ++ +F+EP AV +P C +++ PL RELIL A + Sbjct: 70 LDAGLEHRVRMSGRVKMRTVFVEPDAVAHLPQGGCVVEVPPLLRELILAAALLPLSYEDT 129 Query: 129 PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSE 188 L+++L EL P+ L+LP ++R + + +++ + WA +S Sbjct: 130 GRDGLLMRLLLAELAAIPRLPLYLPWPQDKRLRALCDALSRDLAQVHEAAYWAEQMQVST 189 Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGL 248 R L R ++ETG++F +WRQ +L+ AL+ L G+ + +A GY S +AF MFK+ Sbjct: 190 RTLHRAFLRETGMTFGRWRQHARLLSALERLAHGEKILSIALDHGYTSQSAFSAMFKQHF 249 Query: 249 GQTPGRY 255 G P + Sbjct: 250 GVPPSAF 256 >UniRef50_C6CCZ8 Transcriptional regulator, AraC family n=3 Tax=Dickeya RepID=C6CCZ8_DICDC Length = 282 Score = 216 bits (549), Expect = 8e-55, Method: Composition-based stats. Identities = 69/254 (27%), Positives = 107/254 (42%), Gaps = 5/254 (1%) Query: 20 VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79 V F + T HQH + + A G + +E +VP Y VWIP V H Sbjct: 22 VYFRTYPLTKGTQVAQHQHPFVEFLYAREGGMRMEIEGKTLIVPVLYGVWIPANVPHQIL 81 Query: 80 VTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLA-NRTTTQRAEPMTRRLIQV 137 T+N L L++EP + + + IS RE I + +++ V Sbjct: 82 ATSNVLLESLYVEPEYAAIDHDSSKVVVISDFVREFIHYATEHIPEQYDEAGDDGKMVDV 141 Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197 L L Q P LP + + + + P + WA MS R +R K Sbjct: 142 LTTLLRQLPDAGFSLPWPESVVLVRVCRDIQQAPDAAHGIEAWAARTGMSVRTFSRRFRK 201 Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 ETG+SF +W+++L+L+ ++ L +V +VA LGY ST +F F++ G P RY + Sbjct: 202 ETGVSFSEWKKRLRLLESIIMLKDNRSVTQVALDLGYSSTASFTFAFRQMFGVPPTRYQS 261 Query: 258 RLTTVSPQSAKPDP 271 + P P Sbjct: 262 ---AAHQSATSPPP 272 >UniRef50_B2UKA3 Transcriptional regulator, AraC family n=8 Tax=Betaproteobacteria RepID=B2UKA3_RALPJ Length = 265 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 69/243 (28%), Positives = 114/243 (46%), Gaps = 1/243 (0%) Query: 18 AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77 A F E H H GQL G + VE P +Y +W+P HS Sbjct: 16 APFYFRYDHFQPETDIEPHTHPWGQLNRIALGLMEVVVETRRLTAPAEYLIWVPANQPHS 75 Query: 78 NQVTANAELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136 + + +++ EP A +P C ++ +PL R L+ R + A+ R + Sbjct: 76 ASIRQATDFLSVYVAEPLARRLPPMACLIQQTPLVRALLEDFQARRISVMADDWDLRQFE 135 Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196 +L + L + +LP S ++ +++ + P + L WA +ER LAR Sbjct: 136 LLVEMLGRAGHTDSYLPDSKDRQLEPILQAIRLFPADNTPLKTWAERVHSTERTLARRFQ 195 Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 E G+SF QWR +++L+ AL L + ++Q +A LGY + +AFI MF+K +G +P RY Sbjct: 196 HELGMSFVQWRNRVRLLRALVWLKEDCSIQDIALALGYGTPSAFIAMFRKQIGFSPQRYR 255 Query: 257 ARL 259 ++ Sbjct: 256 RQM 258 >UniRef50_Q7VTI7 AraC-family regulatory protein n=3 Tax=Bordetella RepID=Q7VTI7_BORPE Length = 275 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 71/254 (27%), Positives = 112/254 (44%), Gaps = 14/254 (5%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 A V D P H H + Q + G + LW+VPP A+WIP H Sbjct: 17 PAVVTRRNRYPADAHVKP-HWHDRAQFLCGSSGVMRVATRRRLWVVPPMRALWIPARTVH 75 Query: 77 SNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQR--------- 126 ++++ ++ L+I+ + V MP C L ++ L REL++ + + R Sbjct: 76 EIRMSSAVDMRSLYIDAALVRGMPDDCAVLDMTALMRELVVRASTDAPSTRDAPQRHEAS 135 Query: 127 ---AEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183 + L ++ EL + P+ L LP+ +R + E + + A Sbjct: 136 DGALDEEYGLLSALMVAELRRLPRCGLDLPLPESAALRGLCERALADLSAFDSAQAQARR 195 Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITM 243 +S R L R + ETGLSF +W QQ +L+ A++ L G V VA LGY S +AF M Sbjct: 196 LKLSARTLYRRFLDETGLSFARWIQQARLLDAVRRLGDGQAVTDVALDLGYQSPSAFTAM 255 Query: 244 FKKGLGQTPGRYIA 257 F + LG +P + Sbjct: 256 FNRALGCSPREWRR 269 >UniRef50_A8AKK6 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC BAA-895 RepID=A8AKK6_CITK8 Length = 251 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 1/235 (0%) Query: 26 AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85 + + T+ H H GQL G + E W + P W+P + H + +A Sbjct: 10 HHSSKHTTQWHHHPGGQLYWITRGMVMVETEQGQWALTPGSVGWLPPSLPHCAWMPVSAY 69 Query: 86 LCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ 144 L P++ C SP L+ + T L+QV+ DE+ Sbjct: 70 GASLHFSVEYCGVFPSSPCVRAASPFLLLLLEKICGEGTIGEPSERLAHLLQVMVDEIRC 129 Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204 L + ++R + + + + + A +S R L+RL +++TGL+F Sbjct: 130 ADALSSQLILPDDRRVRQIAQKILADRACTRSQAELAKQAGLSVRTLSRLFIQQTGLTFG 189 Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 QW+Q+ ++I +L+ L++G+ V VA GY++ +AFI +F++ +G TPG++ R Sbjct: 190 QWKQKAKVISSLEYLLRGEPVSLVAQLAGYENVSAFIAVFRRFMGMTPGQFYLRF 244 >UniRef50_A0KEB0 Transcriptional regulator, AraC/XylS family n=25 Tax=Proteobacteria RepID=A0KEB0_AERHH Length = 274 Score = 214 bits (544), Expect = 3e-54, Method: Composition-based stats. Identities = 76/256 (29%), Positives = 139/256 (54%), Gaps = 4/256 (1%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 M L + ++PD+H +A+ G + S HQH++ QL+ A G +T +++ + Sbjct: 1 MAFILPDHPFDPDQHDGSAIGIASALGWHD--SGRHQHKRHQLLFAQAGCMTIELDDQVC 58 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120 ++PP A W+P G+ H + L+ +P +PT L ++PL RE+I +A Sbjct: 59 LLPPTRAAWLPAGLPHRVLMRGVVAYRSLYFQPE-PGLPTEMAVLAVNPLLREIIERMAI 117 Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180 + A + +L +EL Q P++ LP+ S P++ ++ + +G L + Sbjct: 118 WPWDKPAAE-QHCTLALLQEELAQAPRESWQLPLPSDPRLAGWLQEVKRGDTLPDRLNRL 176 Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240 A S++ + R+ ++ETG+S++ WRQQ +L+ AL+ L + + + +VA TL + S +AF Sbjct: 177 AERVGASDKTIGRIFMRETGMSYQAWRQQWRLLRALELLAEAEPISRVAATLEFASDSAF 236 Query: 241 ITMFKKGLGQTPGRYI 256 I+ F++ GQTP RY+ Sbjct: 237 ISFFRQHTGQTPLRYL 252 >UniRef50_C6DFV4 Transcriptional regulator, AraC family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6DFV4_PECCP Length = 273 Score = 213 bits (543), Expect = 4e-54, Method: Composition-based stats. Identities = 59/228 (25%), Positives = 115/228 (50%), Gaps = 9/228 (3%) Query: 34 PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93 P H+H++GQL+ A+ G + ++ W++PPQ ++W+P HS + ++ EL L+ P Sbjct: 40 PSHKHKRGQLLYAVKGVMLVQTDSRQWVIPPQRSLWLPAEQWHSFTLLSHTELRTLYFTP 99 Query: 94 SAVTMP------TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147 S V + ++P + LI +L ++ + + + Q+L + + Sbjct: 100 SFVAETCGMKTLDHIHVIGMTPFAQHLISSLFEQSFNHSTQKL---IAQLLLRIVNETEA 156 Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207 + L + K+ + + + +L ++A AMSER +R ++TG SFR W+ Sbjct: 157 LPVDLAMPCDDKLHRVAQDILVNNRWNVSLSEFAELVAMSERTFSRYFTEDTGCSFRTWK 216 Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 Q+ ++ +++ L G V+ VA+ LG+ ++FI F+ GQTP + Sbjct: 217 QRARIFVSMDLLSNGMPVKNVAYKLGFSCPSSFIAAFRTVTGQTPSCF 264 >UniRef50_A1VPE7 Transcriptional regulator, AraC family n=2 Tax=Comamonadaceae RepID=A1VPE7_POLNA Length = 280 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 82/273 (30%), Positives = 122/273 (44%), Gaps = 17/273 (6%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENAL- 59 ++ + + + P + V + + H H QL G + T E Sbjct: 9 LISLGDTDPFTP--SPQRPVRVRSRSMAADTHLEPHTHAWAQLAYCATGVVQVTAEQTRP 66 Query: 60 ---------WMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA-VTMPTTCCTLKISP 109 ++PP AVWI G H V AEL L+++ SA C L +SP Sbjct: 67 DQAQADEITCIIPPSRAVWIAPGARHHITVREAAELRTLYLDASATPPGWQGCRVLVVSP 126 Query: 110 LCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSS----HPKIRTMVE 165 L REL+ +L + + E T+ L ++ DE+ Q L +P+ ++R + E Sbjct: 127 LLRELVHSLDDGSGQPLTEARTQWLSALVLDEITHADIQALGVPMPHPDSGDKRLRALCE 186 Query: 166 MMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTV 225 + + P E L WA SER +ARL + GLS++QWRQQ L AL L +G V Sbjct: 187 AVLRAPSERATLAGWAADIGASERTVARLFRDQLGLSYQQWRQQAILAHALPMLARGQPV 246 Query: 226 QKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 VA GY S +AF MFK +GQ P ++ A+ Sbjct: 247 GAVAAASGYASESAFSAMFKAAMGQPPSQFHAK 279 >UniRef50_UPI0001B55F3C AraC family transcriptional regulator n=3 Tax=Streptomyces RepID=UPI0001B55F3C Length = 271 Score = 212 bits (541), Expect = 8e-54, Method: Composition-based stats. Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 4/224 (1%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 H+H QL A G +T + W++PP A+WIP G H+ T A + +++ P Sbjct: 42 RHEHSAHQLAWAAAGTLTVDIGAHSWVLPPTLALWIPAGTPHTTSATRPALMRSVYLLPR 101 Query: 95 AVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153 + + + PL RELI LA+ L+ D L + +P Sbjct: 102 HSPVRRPGPTVVTVGPLLRELITHLADTPLEPGPRARAEALLP---DLLRPVEVTTIEVP 158 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 + + + E + P + +L +W S R LARL ETGLSF +WR + +L Sbjct: 159 MPRDERALRVAEALVAHPADPRSLDEWGRLVGASARTLARLFSAETGLSFGRWRTRARLR 218 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 L+ + + VAH +GY S ++F+ F+ G+TPG Y + Sbjct: 219 AGLEHMAVNRPLTAVAHRVGYTSPSSFVAAFRHETGRTPGAYFS 262 >UniRef50_A6VY36 Helix-turn-helix-domain containing protein AraC type n=2 Tax=Gammaproteobacteria RepID=A6VY36_MARMS Length = 258 Score = 212 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 70/258 (27%), Positives = 120/258 (46%), Gaps = 5/258 (1%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 M+ L Y DR + + G +E H H Q++ + G + T+E+ + Sbjct: 1 MNANELIQYFSDRQVVSKIINLPANGVEE----WHAHPWHQVLYPIAGLLQSTIESKSII 56 Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLAN 120 VP ++IP H + + +++ P S + + ++P +ELI+ L Sbjct: 57 VPHNGMLFIPANAIHKSVSVTKTQFLAVYLNPKSTESYGNNAKSCLVTPFLKELIVLLVK 116 Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180 + AE MT L+ VL D++ ++ L + + ++ + + + P L +W Sbjct: 117 QGLDNHAEQMTTNLLCVLRDQIAIAESYEIPLLIPNDRRLMAIFVELNQQPDLALTLSEW 176 Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240 A S R L+RL KE SF WRQ ++L+++LQ L K ++Q +A LGY S +A+ Sbjct: 177 ATKVGASPRTLSRLCAKEFNQSFAMWRQNIRLVLSLQLLEKNMSIQNIALDLGYQSDSAY 236 Query: 241 ITMFKKGLGQTPGRYIAR 258 I FK QTP +Y R Sbjct: 237 IHAFKGLFAQTPSQYRKR 254 >UniRef50_A9BNM6 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria RepID=A9BNM6_DELAS Length = 310 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 116/256 (45%), Gaps = 16/256 (6%) Query: 19 AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78 V L H H QL+ A+ G + + W+VPP VW+ GV H Sbjct: 51 PVTGVAADYPAGLEVEEHSHECCQLLYAVQGVLEVRAGSGRWVVPPTRGVWLRSGVPHGL 110 Query: 79 QVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137 ++ ++ LF++ +A +P T C +++SPL RELI +A + ++++ Sbjct: 111 RMRGAVQVRSLFVDAQAAADLPGTDCVIEVSPLLRELISEVARWPASAPPGRRESMVVEL 170 Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKG---------------PVEWGALGQWAG 182 L EL Q P HLP ++ + +A+G WA Sbjct: 171 LLQELRQPPVVPFHLPWPQDARMAAVCHALAEGEGADGFATAAAAADIGAATATAADWAA 230 Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242 AM E+ R ++ TG+SF +WRQ+ +L+ ++Q L+ G + +VA GY+S +A+ Sbjct: 231 RLAMGEKTFHRHFLQATGMSFGRWRQRARLLSSMQALLAGRPIVQVALEAGYESHSAYSL 290 Query: 243 MFKKGLGQTPGRYIAR 258 F++ G P + AR Sbjct: 291 AFRRQFGMPPSAFGAR 306 >UniRef50_C8QCP4 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QCP4_9ENTR Length = 259 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 1/226 (0%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 H H GQ+I + VE + P +WIP G HS+ + + Sbjct: 33 PHAHAWGQVIFVKSHVLEMEVEGERLLTPADMPIWIPPGHRHSSYNHRQSLFRTFNLATD 92 Query: 95 AVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153 +P C L + + ++ A R Q RL +VL D L P Q+ +LP Sbjct: 93 LCDGLPQQACLLNVDTIVHAIMDEFARRGLEQPLSDADWRLCEVLGDRLRLAPVQKSYLP 152 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 S+ + ++ + P + L QWA +ER LAR ++ +SF +WRQ+L+ + Sbjct: 153 GSNDKLLAPILHALQVHPGDNTTLAQWAKRVFTTERTLARRCQQQLNMSFSEWRQRLRFL 212 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 A+ L +G +VQ +AH LGY S +A I MF+ G TP RY +RL Sbjct: 213 RAITLLEQGISVQAIAHELGYSSASALIVMFQHQAGTTPDRYRSRL 258 >UniRef50_B1LVX0 Transcriptional regulator, AraC family n=3 Tax=Rhizobiales RepID=B1LVX0_METRJ Length = 272 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 64/232 (27%), Positives = 102/232 (43%), Gaps = 1/232 (0%) Query: 19 AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78 VA + H H + QL+ A G + ++ W+VP +A+WIP + H+ Sbjct: 30 PVAVMPKTYAAGMHLDRHFHPRAQLLYATSGLMMAFADDGTWVVPEGHALWIPPRLPHAV 89 Query: 79 QVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137 +C +++P+AV P +C + +S L + LA + L + Sbjct: 90 ATHGAVSMCSAYLDPAAVRSFPASCRVIAVSRLMASALTALAEEPVLYAVDGRGGHLAAL 149 Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197 + DE+ + P L LP+ P++R + + + P L WA S R L R Sbjct: 150 VLDEIGRAPATPLALPLPRDPRLRRVCLALIEDPASEADLDAWADRAGASRRTLTRGFRA 209 Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 ETGLSF WR + ++I AL +G + VA +GY S A T + LG Sbjct: 210 ETGLSFGDWRARARVIRALALAAEGRPPRAVAAAVGYRSAQALRTTVARVLG 261 >UniRef50_Q7NRZ6 Probable transcriptional regulator AraC family n=1 Tax=Chromobacterium violaceum RepID=Q7NRZ6_CHRVO Length = 247 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 2/226 (0%) Query: 33 SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92 + H H +GQL A GA+ + ++P WIP G+ H L +E Sbjct: 22 TARHSHAEGQLAWASAGALELDADGRRILLPGGCVGWIPPGMPHGAHYHGELRGWSLQLE 81 Query: 93 PSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151 + + +P + SPL + + L + + RRL+ VL DEL Sbjct: 82 AACLPALPPDLRVWRASPLLQGVFQRLGDWPEQAGPDA-ARRLVAVLADELAWAEPYPAS 140 Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211 L SHP +R + E +++ P L +WA MS R+L R ETG+ +WR++L+ Sbjct: 141 LAWPSHPALRKLAEALSRDPSLDWDLERWARQIGMSRRSLIRHFRAETGMGVAEWRERLR 200 Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 ++ A L +G +V A LGY ++AFI F++ G+TPGRY++ Sbjct: 201 MLRARALLAEGRSVGYCAAELGYAGSSAFIVAFRRCFGETPGRYLS 246 >UniRef50_Q7CRR0 Transcriptional regulator, AraC family n=4 Tax=Rhizobiaceae RepID=Q7CRR0_AGRT5 Length = 284 Score = 211 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 67/252 (26%), Positives = 117/252 (46%), Gaps = 2/252 (0%) Query: 13 DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72 D +E +A +P H H + Q+ A G + + + WM+PP + + IP Sbjct: 25 DGTNEPVLALH-RVYPTGHRTPPHSHSRVQIWCARQGVVLVSTADGRWMIPPGHGLLIPA 83 Query: 73 GVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTR 132 G++H ++ +N E+ +++ P + ++I+ L LI L A Sbjct: 84 GLQHEAEIISNVEMHSIYVHPELFQA-ESPKVVEITDLASSLISELLAEEHQPSAFHRQG 142 Query: 133 RLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192 + +L DE+ + P++ L LP + ++ + + PV + +WA ++S R+ Sbjct: 143 LVRALLLDEVNRLPERPLGLPFPDNQRLAALCRDFLRKPVARVEIDEWAAAMSISRRSFT 202 Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252 RL +E G+SF WRQQ + +L L G+ V VA GY++ AF TMF++ LG +P Sbjct: 203 RLFRRELGVSFVTWRQQACIFASLPRLAAGEAVTNVALDAGYENIPAFTTMFRRMLGSSP 262 Query: 253 GRYIARLTTVSP 264 Y S Sbjct: 263 RAYRQAARQRSA 274 >UniRef50_Q13VV8 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=Q13VV8_BURXL Length = 268 Score = 211 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 2/224 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H+H Q + A +G + +PP Y VWIP G H+ + EL L+IEP+A Sbjct: 41 HEHVWWQFLFARNGLMQVQAGATTLTLPPDYGVWIPPGCVHTLWIGEEVELESLYIEPTA 100 Query: 96 VTM-PTTCCTLKISPLCRELILTLAN-RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153 V + + + R I + R ++VL D L P +LP Sbjct: 101 VAIQDQEPRVVMVDEFVRAFIHHGCTSIPVKYDEDGADGRKVKVLLDSLQSLPDAPFNLP 160 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 + P++ + + P L + AG MS R R ++ TGL + WRQ+++L+ Sbjct: 161 FPTEPRLLEVCLTIQSAPHLAHTLDESAGLARMSSRTFTRHFLRATGLPYHTWRQRMRLL 220 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 +L+ L TV +VA T+GY + +AF FK+ G++P R+ Sbjct: 221 GSLEMLRSDITVTEVALTIGYSTPSAFTHAFKQLFGKSPSRFTR 264 >UniRef50_A8G994 Transcriptional regulator, AraC family n=12 Tax=Gammaproteobacteria RepID=A8G994_SERP5 Length = 255 Score = 209 bits (533), Expect = 7e-53, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 123/251 (49%), Gaps = 9/251 (3%) Query: 8 NGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYA 67 + ++PD + + + I A + S H H GQL+ + G + T+ ++ ++PP Sbjct: 8 DEFDPDAINNSVLG--IAAELAQHDSGPHWHNMGQLLFSQRGCMRITLNESICLLPPARI 65 Query: 68 VWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQR 126 WIP V H QVT A ++++ + L S L RE++ +A T + Sbjct: 66 AWIPPLVVHRVQVTGVAGYRSVYLDNHRYPGLSPHLEVLSASSLLREVLERIALADFTTQ 125 Query: 127 AE-PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185 E + ++ V DE+ ++ LP+ ++R + M P L + A + Sbjct: 126 WESGPSANILAVCLDEIRHAQRELTLLPLPKDRRLRQLAGMEEVPP-----LNELARYSG 180 Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245 SE+ ++R+ KETGLS++QWRQQ +LI A++ L +G + +A L + S +AF T FK Sbjct: 181 ASEKTISRIFRKETGLSYQQWRQQWRLIKAIELLAEGYGLSDIAGKLEFSSDSAFSTFFK 240 Query: 246 KGLGQTPGRYI 256 G +P Y+ Sbjct: 241 NMTGSSPRAYM 251 >UniRef50_B4SMW0 Transcriptional regulator, AraC family n=3 Tax=Stenotrophomonas RepID=B4SMW0_STRM5 Length = 265 Score = 209 bits (532), Expect = 8e-53, Method: Composition-based stats. Identities = 67/250 (26%), Positives = 119/250 (47%), Gaps = 2/250 (0%) Query: 7 LNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQY 66 L+ D V + HQH +GQL+ A G + ++ W++P + Sbjct: 10 LDPALADAADGPVVLAARLRQHGMRRTARHQHARGQLLGAQQGLLRIAADDLHWLLPAGH 69 Query: 67 AVWIPGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQ 125 WIP + H+ + L+ A +P+T + + L + + R + Sbjct: 70 VAWIPPLLPHALLSADGFDGWSLYFNAEACLGLPSTPRIFQPNALLQAATIRA-LRWPHR 128 Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185 + RL V+ DE+ L LP +++ + +A+ P + ++ WA Sbjct: 129 PLDAAQARLAGVIADEIAASTPLPLALPQPRDRRLQKIAAALARAPHDNRSIEDWATRSG 188 Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245 +S R+LAR + ET ++ QWRQ+L++++AL L+ G+ V VA ++GYD+ +AFI +FK Sbjct: 189 LSSRSLARHWLAETHMTLSQWRQRLRVLLALPRLLSGEPVISVALSMGYDTPSAFIAVFK 248 Query: 246 KGLGQTPGRY 255 + +G TP RY Sbjct: 249 REMGVTPARY 258 >UniRef50_B4EHM1 AraC family regulatory protein n=5 Tax=Burkholderia cenocepacia RepID=B4EHM1_BURCJ Length = 271 Score = 209 bits (532), Expect = 8e-53, Method: Composition-based stats. Identities = 77/233 (33%), Positives = 117/233 (50%), Gaps = 6/233 (2%) Query: 26 AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85 A H H+ GQL+ G + VE W+ PP A+WIP H+ +V + + Sbjct: 35 ARALAHEYAPHAHQAGQLLFTTRGVLVLDVEGQRWITPPLRAIWIPARTVHAMRVADDVQ 94 Query: 86 LCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLAN-RTTTQRAEPMTRRLIQVLFDELP 143 LC L++ + +P T C + +SPL REL +++ + +P L ++ DEL Sbjct: 95 LCSLYLGDALGARLPATLCAMTVSPLLRELATRVSHPFDCSVDHDP----LARLFADELS 150 Query: 144 QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203 + Q L LP+ ++ + E + + P L A A+S R+LARL ETG+S Sbjct: 151 ELAQTPLTLPLPRDRRLLKLCERLQREPHCELPLDTLARDAALSARHLARLFRSETGMSV 210 Query: 204 RQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 WRQQL+L M+L L G V + AH +GY S T + FK+ G TP +Y+ Sbjct: 211 AAWRQQLRLSMSLALLASGMPVTQAAHQVGYRSPTTYAATFKRAFGVTPSQYL 263 >UniRef50_D1VDY4 Transcriptional regulator, AraC family n=1 Tax=Frankia sp. EuI1c RepID=D1VDY4_9ACTO Length = 322 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 110/263 (41%), Gaps = 10/263 (3%) Query: 18 AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77 A+ + L +P H H Q+ A+ G + +++PPQ A W+P G+ H Sbjct: 58 DALGGGYMYEGERLVTPWHSHDLHQIEYAMSGVVEVETAGGRYLLPPQQAAWLPAGLSHQ 117 Query: 78 NQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRT-----TTQRAEPMT 131 + + +P V P + +SPL RE+IL + ++ Sbjct: 118 ATMNTAVRTVSVMFDPRIVPRPGDRARIVAVSPLIREMILYALRWPIARTESDDVSDGFF 177 Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191 R L ++ + + + L LP S+ P + + + + +SER L Sbjct: 178 RTLAHLVAEAIDH--EAPLSLPTSADPLVAAAMAHTRENLG-TVTAATVSRAIGVSERTL 234 Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250 R E G+S+R + Q +L+ A+ L + G +V V+ +G+++ +AF F +G+ Sbjct: 235 RRQFAAELGMSWRAYLLQARLLRAMALLAEPGPSVLDVSLAVGFENVSAFARAFALRVGE 294 Query: 251 TPGRYIARLTTVSPQSAKPDPRQ 273 TP Y R+ P PR+ Sbjct: 295 TPSAYRRRVAADPKPIGGPAPRE 317 >UniRef50_C1A6S8 AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6S8_GEMAT Length = 286 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 73/238 (30%), Positives = 115/238 (48%), Gaps = 6/238 (2%) Query: 39 RKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI-EPSAVT 97 GQLI A GAI+ V +LW+VP + +W+P H ++ L +FI A Sbjct: 38 DWGQLIWASRGAISVMVGQSLWLVPARSGLWLPPATTHDVRMIGRGVLRLVFIARARARA 97 Query: 98 MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSH 157 +P T ++PL RE++ + R T A+P RL+ VL DEL + LP+ + Sbjct: 98 LPKTPAVRALTPLLREILRRVLARDTLTTADPRDGRLLGVLVDELSEVSPAPFDLPMPTD 157 Query: 158 PKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQ 217 P+ ++ + P + A S R L R+ ETGL+F WR + +L+ A+ Sbjct: 158 PRAIRAAALVREHPAQPPDAITIARHAGASVRTLERVFRAETGLAFGAWRLRARLMHAMI 217 Query: 218 GLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY-----IARLTTVSPQSAKPD 270 L G++V + G+ T+AF+ F++ G TPG Y +R + VS Q+ P Sbjct: 218 LLANGESVTRTGIAAGFAGTSAFVHAFRRTTGTTPGAYATPGVRSRTSPVSSQTGVPS 275 >UniRef50_D2BBL9 Transcriptional regulator, AraC-family n=18 Tax=Actinomycetales RepID=D2BBL9_STRRD Length = 278 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 7/255 (2%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 H + + H H + Q++ A G ++ T + W+ P A+WIP G Sbjct: 6 HNPRASTGLRPLPAGAGIDAHWHDENQIVYAGRGVLSVTTDAGSWIAPAIRAIWIPAGTV 65 Query: 76 HSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134 H ++ + +L + + + + + PL RELI+T + AE RRL Sbjct: 66 HEHRAYGDTDLHLVGLPVKDNPLRLDQPAVISVGPLLRELIITYTEQPADLTAE--RRRL 123 Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 VL D L QQ +H+P + P++ + ++ P + L + +S+R L RL Sbjct: 124 RAVLLDRLRHSAQQPVHVPAARDPRLVAVCAILRDNPADNRTLARLGAVAGVSDRTLTRL 183 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 E G+SF QWR QL+L AL L + V VAH G+ S++AFI +F++ G TPG Sbjct: 184 CRAELGMSFPQWRTQLRLHYALLLLAEDTPVTAVAHRCGWASSSAFIDVFRRAFGHTPGT 243 Query: 255 YIARLTTVSPQSAKP 269 + A +SP + P Sbjct: 244 HRA----LSPTATAP 254 >UniRef50_Q8EHW8 Transcriptional regulator, AraC/XylS family n=3 Tax=Gammaproteobacteria RepID=Q8EHW8_SHEON Length = 259 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 76/258 (29%), Positives = 124/258 (48%), Gaps = 1/258 (0%) Query: 4 RLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63 R + D+ A + F A +P H+H GQL L G + ++ P Sbjct: 2 RPVYHPLSSDQLPVADIFFNYEAFLPNTITPKHRHNWGQLQLISGGIMELHASGQRFLSP 61 Query: 64 PQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRT 122 QYA+W+P GVEH + + C L I + P C L ++P+ + ++ L R Sbjct: 62 SQYAIWVPAGVEHESYTRRSIHYCSLNIVANRAQVFPDVTCLLAVTPIAQAIVNDLRQRQ 121 Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182 +RL++VL D+L Q LP S+ ++ +++ + P +L WA Sbjct: 122 VRVAQTDADKRLVEVLIDQLILGQAQPQFLPSSTDKLLQPILQQLELEPASQKSLKSWAS 181 Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242 +ER LAR G+SF + RQ+ + I +LQ L +G ++++VA TLGY+ T+ +I Sbjct: 182 ELHTTERTLARRCQNCLGMSFTELRQRHKFIYSLQLLREGLSIKEVALTLGYNQTSPYIV 241 Query: 243 MFKKGLGQTPGRYIARLT 260 MFKK +P +Y +L Sbjct: 242 MFKKYAQYSPEQYRRQLA 259 >UniRef50_C9PF82 Substrate-binding transcriptional regulator AraC family protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PF82_VIBFU Length = 274 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 71/244 (29%), Positives = 116/244 (47%), Gaps = 2/244 (0%) Query: 14 RHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGG 73 H+A + IH + H H Q+I L G + ++EN +VP ++IP Sbjct: 10 SPHQAFITKTIHMRAGYID-DFHTHPWHQIIFPLSGLLQSSIENRSVIVPHNAMLYIPAD 68 Query: 74 VEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTR 132 H + + + +++ P S V + ++P + LIL L NR+T + Sbjct: 69 TVHKSVSVTDTQFLAMYLNPKSGVNYGVEAKSCLVTPFLKALILLLFNRSTQAQPPENLI 128 Query: 133 RLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192 L+ VL D++ Q + L + +++ + E + P +L +WA SER L+ Sbjct: 129 HLLTVLRDQIDTAGQYAIPLLIPRDKRLKAIFEQLTAQPDVKFSLNEWAKHVGASERTLS 188 Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252 RL KE SF WRQ ++L+++LQ L T+Q +A LGY S +A+I FKK TP Sbjct: 189 RLCAKEFDQSFSLWRQNVRLVLSLQLLSTPRTIQDIALELGYASDSAYIYAFKKLFHHTP 248 Query: 253 GRYI 256 +Y Sbjct: 249 SKYR 252 >UniRef50_C7I316 Transcriptional regulator, AraC family n=1 Tax=Thiomonas intermedia K12 RepID=C7I316_THIIN Length = 291 Score = 207 bits (526), Expect = 4e-52, Method: Composition-based stats. Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 5/244 (2%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 H H +G L L G + + P Q W+P GVEH+ Q F+ P Sbjct: 45 THCHARGTLFLLTEGLVIVETAQGRQLSPSQTIGWMPPGVEHAVQSYGPTAGFGAFLTPQ 104 Query: 95 AV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153 +P + ++PL ++ + + RL+ VL DEL Q P + L LP Sbjct: 105 FCGDLPAEPTSYPVNPLVALVLQKALSWPHDTPLDLTRMRLLLVLLDELRQSPARPLQLP 164 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 ++ ++ + L QWA + +S R+L+R V ETG+SF QWRQ +L Sbjct: 165 WPQDARLLSIARALLGNIASPRTLEQWARWADISARSLSRKFVLETGMSFAQWRQWARLT 224 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI----ARLTTVSPQSAKP 269 AL+ L G V+ VA +LGYDS +AFI F++ LG TP Y + ++P+ A Sbjct: 225 QALEWLATGRAVKDVALSLGYDSVSAFIKTFRQALGTTPSAYFQTQQRKQAALNPRVAAD 284 Query: 270 DPRQ 273 Q Sbjct: 285 QEAQ 288 >UniRef50_Q0B8S9 Transcriptional regulator, AraC family n=1 Tax=Burkholderia ambifaria AMMD RepID=Q0B8S9_BURCM Length = 261 Score = 206 bits (525), Expect = 6e-52, Method: Composition-based stats. Identities = 69/230 (30%), Positives = 101/230 (43%), Gaps = 1/230 (0%) Query: 32 TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91 SP H H GQL+ GA + L + P A WIP + HS + ++I Sbjct: 29 ESPRHVHSCGQLLYPERGAALLETPHHLVRLGPGQAAWIPPDLPHSILMGRPYRYHSVYI 88 Query: 92 EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151 PT +SPL +ELIL T + + +V+ E+ + P+ Sbjct: 89 GAGLYAEPTF-SVSHVSPLLKELILDAERWDDTDASSDVRFWKTRVIVAEIRRAPRVAAG 147 Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211 +P+ P+I + + P + LG WA SE+ L R VK TGLSF+QWR + Sbjct: 148 MPIPDDPRISVICRALEIDPADARMLGDWARQVGASEKTLQRAFVKSTGLSFQQWRTHAR 207 Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTT 261 + AL G + VA +GY S A+ F++ G +PGR R T Sbjct: 208 MTKALAMHRCGARLLDVAVAVGYSSEGAYAHAFRQFYGYSPGRMKPRSTG 257 >UniRef50_D1BGA1 DNA-binding domain-containing protein, AraC-type n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BGA1_SANKS Length = 293 Score = 206 bits (524), Expect = 6e-52, Method: Composition-based stats. Identities = 61/231 (26%), Positives = 108/231 (46%), Gaps = 6/231 (2%) Query: 26 AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85 +G D S H H +L+ G +T + +MVP +WIP GV H+ Q Sbjct: 28 SGPDRWDS--HSHDVHELLWGAEGVLTVETADGYFMVPAVLGLWIPAGVAHAVQCAGGTG 85 Query: 86 LCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ 144 +++ + ++PL REL++ +A + L L + + Sbjct: 86 FWCTYVDADVRPEFTGRTTAVTVTPLLRELLVHMAAEPMRAEVRDASAALAVALLEAVDM 145 Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204 P LP+ + ++ ++ + P + +L W ++S RNL+RL +ETG++F Sbjct: 146 SPMV---LPMPTDARLASIARALLDDPGDRRSLDDWGTEVSVSVRNLSRLFHRETGMTFA 202 Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 QWR ++ +A+ L G +V V+ +GY + +AF+ F++ LG TPG Y Sbjct: 203 QWRVHARVRLAVGLLASGLSVGTVSRRVGYSTPSAFVQSFRRVLGHTPGWY 253 >UniRef50_A0KTL0 Transcriptional regulator, AraC family n=25 Tax=Gammaproteobacteria RepID=A0KTL0_SHESA Length = 292 Score = 206 bits (524), Expect = 7e-52, Method: Composition-based stats. Identities = 70/230 (30%), Positives = 116/230 (50%), Gaps = 8/230 (3%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 +H+H QLIL L G + AL++VP A+++P GV H + + +++ P Sbjct: 57 LHKHCWHQLILPLQGLLQTEANGALFLVPHTTALFVPAGVIHESVAITDTCFIGVYLNPM 116 Query: 95 A-VTMPTTCCTLKISPLCRELILTL-------ANRTTTQRAEPMTRRLIQVLFDELPQQP 146 T + +S REL+LT+ + A P +RL++VL+D++ Sbjct: 117 CGRDYGATIKPVAMSAFLRELVLTIRKQCVFNTSMNVEPIALPTIQRLLEVLYDQINSAE 176 Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206 Q L + +++ + E + + P +L +W SER L+RL V+E G SF W Sbjct: 177 GQTFKLLIPQDRRLKLIFEHLTQTPALDLSLAKWGEMVGASERTLSRLFVREFGSSFGLW 236 Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 RQ L+LI +L L ++Q VAH +GY + +++I FK+ G TP R+ Sbjct: 237 RQHLRLIYSLSLLATNLSIQNVAHQIGYQNDSSYIKAFKERFGMTPQRFR 286 >UniRef50_Q3JG82 AraC family regulatory protein n=50 Tax=Proteobacteria RepID=Q3JG82_BURP1 Length = 902 Score = 206 bits (524), Expect = 7e-52, Method: Composition-based stats. Identities = 79/259 (30%), Positives = 123/259 (47%), Gaps = 3/259 (1%) Query: 14 RHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGG 73 VA E T+ H H +GQL+ A G ++ +++ W+VP +AVWIP Sbjct: 102 SSEGPFVAAVELTQRTERTTARHSHARGQLVGASSGLVSIGLDDEDWVVPAIHAVWIPPH 161 Query: 74 VEHSNQVTANAELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTR 132 HS + +F+ E +P + +S L RE + A+ + Sbjct: 162 RVHSLRSFGPFAGWSVFVAEDRCAALPGAPRAIVMSTLLREAVRRAASW-RGAALDAARA 220 Query: 133 RLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192 R+ V+ DE+ LP P++R + + +A + +WA + M+ R L+ Sbjct: 221 RIANVILDEIAAAQTGPRGLPRPRDPRLRRIADALAGDLADNRRADEWAAWAGMAPRTLS 280 Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252 R V ETG +F QWRQQ +++ AL+ L G TV VA LGYD+ +AFI MF++ LG TP Sbjct: 281 RRFVSETGFTFTQWRQQARVLRALERLADGVTVTAVALDLGYDNVSAFIDMFRRTLGTTP 340 Query: 253 GRYIARLTTVSPQSAKPDP 271 G+Y+ + P P Sbjct: 341 GQYV-NARAGDARDGAPAP 358 >UniRef50_A5U9G2 AraC-family transcriptional regulator n=12 Tax=Mycobacterium tuberculosis complex RepID=A5U9G2_MYCTA Length = 263 Score = 206 bits (524), Expect = 8e-52, Method: Composition-based stats. Identities = 66/229 (28%), Positives = 111/229 (48%), Gaps = 4/229 (1%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 H+H Q++ GA++ T W+ P A+WIP G H ++ + + Sbjct: 17 PPGARIERHRHPSHQIVYPSAGAVSVTTHAGTWITPVNRAIWIPAGCWHQHKFHGHTQFH 76 Query: 88 FLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146 + ++P P T L ++PL REL++ + T E R++ VL D+LP Sbjct: 77 GVALDPQRYRGGPATPTVLAVNPLMRELVIACSQADRTDTDE--HHRMLAVLQDQLPTTS 134 Query: 147 -QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 ++ L +P + ++R ++A + L Q G +S+R L+RL E G++F Q Sbjct: 135 IREPLWVPSPTDRRLRHACALIADNLTQPLTLQQIGGRIGVSQRTLSRLFSDELGMTFPQ 194 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 WR QL+L AL L + V VA G+ + +AFI +++ G TPG+ Sbjct: 195 WRTQLRLQHALVLLAERHDVTSVASECGWATPSAFIDTYRQAFGHTPGQ 243 >UniRef50_A8L2S5 Transcriptional regulator, AraC family n=3 Tax=Actinomycetales RepID=A8L2S5_FRASN Length = 263 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 72/231 (31%), Positives = 100/231 (43%), Gaps = 4/231 (1%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 TD H H QLI G + W+VPP AVW+P GV H++Q + Sbjct: 32 TDRERIDWHDHTDHQLIYPGTGVLRVVTRVGSWVVPPLRAVWLPAGVAHAHQAHGPTHMH 91 Query: 88 FL-FIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146 L F + + + L RE+I L T T A R L VL L Sbjct: 92 SLAFSDVDDPFGSPDPTVVAVPALLREIIRAL---TATGLAGADRRDLTAVLLRSLRPVT 148 Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206 + +L LP ++ + +A P + L + SER L+RL ++TG++F QW Sbjct: 149 ELRLCLPQPRDDRLVALTAALAADPADPRTLAELGAAVGASERTLSRLFRRQTGMTFPQW 208 Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 R QL+L L L G+ V VA GY + +AF F+ G TP RY Sbjct: 209 RAQLRLHHGLTLLAGGEPVTTVAFACGYSNPSAFTAAFRDAFGVTPARYAR 259 >UniRef50_Q5FU43 Transcriptional regulator, AraC family n=1 Tax=Gluconobacter oxydans RepID=Q5FU43_GLUOX Length = 259 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 1/229 (0%) Query: 30 ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89 + H H +GQ+ G + E+A W++ P +W+P + H + L Sbjct: 26 RRIAERHAHARGQIFGIESGVMAIRTEHAYWLIGPGQCLWLPPHIPHEARSHGAVAGWSL 85 Query: 90 FIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQ 148 ++ + + +P + L L L++ R + L + + E P+ Sbjct: 86 YVSAARCSNLPDEPFLAGGTRLLTALADRLSHDADETRWDAQISCLAECFWHEFLAAPRA 145 Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208 + LP + + ++ P + WA AMS R+ R ETGL F WRQ Sbjct: 146 SVSLPFPKSEQFCRVANTLSDNPADNRDQKDWAELAAMSLRSFVRHFTLETGLPFSVWRQ 205 Query: 209 QLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 +L+++ A + L +G++V VA +GY+S AF T F K G P Y Sbjct: 206 RLRILNAQEKLARGESVASVALDVGYESLGAFATAFHKNTGYRPSDYAR 254 >UniRef50_B5XX95 Transcriptional regulator, AraC family n=7 Tax=Enterobacteriaceae RepID=B5XX95_KLEP3 Length = 266 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 66/231 (28%), Positives = 115/231 (49%), Gaps = 9/231 (3%) Query: 32 TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91 P H H +GQL+ A G + E+ W++PPQ A+W+P HS + + +L ++ Sbjct: 38 VDPPHHHVEGQLLFATRGVMLVQTESDRWVIPPQRALWLPPLHIHSYHLLSQTDLRAVYF 97 Query: 92 ------EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 E ++ T + +PL +ELI L + A P R++ +L + L + Sbjct: 98 SSSLIAECTSFTKSQQVHVITATPLVKELIAGLF---SEDYARPSQRKIALLLLEILSEA 154 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 P + LP+ + ++ + + +L + A AMSER +RL +K+TG SFR Sbjct: 155 PPLTMALPMPNDERLFSAARSLLVNQRWEASLSELAFMSAMSERTFSRLFMKDTGFSFRT 214 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 W+Q+ ++ +L L G +++VA+ LG+ AF F+ LG TP ++ Sbjct: 215 WKQRARICASLDLLTNGVPIKQVAYQLGFSCPAAFTAAFRCILGATPRDFV 265 >UniRef50_Q5LMG8 Transcriptional regulator, AraC family n=1 Tax=Ruegeria pomeroyi RepID=Q5LMG8_SILPO Length = 238 Score = 204 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 65/232 (28%), Positives = 97/232 (41%), Gaps = 2/232 (0%) Query: 19 AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78 V D S H+H + QLI A+ G + + +PP Y + +P H Sbjct: 7 DVVGYARDYRDGYVSVRHRHPRHQLIYAISGLMMAETDAMSHAIPPGYGLIVPAQQPHEI 66 Query: 79 QVTANAELCFLFIEPSAVTMPT--TCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136 ++ L L++ C + ISPL +LI L P L Q Sbjct: 67 RMIGAVRLQSLYVRAGLPRADALARCRLVTISPLLAQLIAALCEMANPWPMPPRALHLSQ 126 Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196 ++ EL P L LP + P++R + + + P +L WA MS R +R Sbjct: 127 LILIELLAAPVSPLALPYPTDPRLRRVCDGLIATPASPRSLDDWAAEAGMSRRTFSRHFQ 186 Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGL 248 ETGLSF +W Q+L+ AL+GL KG +VA LGY + M ++ Sbjct: 187 LETGLSFGKWAQRLRCQAALRGLAKGRPAARVARELGYANAYTMAAMMRRMT 238 >UniRef50_D0L975 Helix-turn-helix-domain containing protein AraC type n=3 Tax=Corynebacterineae RepID=D0L975_GORB4 Length = 259 Score = 202 bits (515), Expect = 7e-51, Method: Composition-based stats. Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 3/231 (1%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 H H Q++ A G + T + W+ PP A+WIP H ++ N E Sbjct: 27 PGGHRIARHHHLTHQIVYASSGLVEVTTQAGTWVAPPDRAIWIPALAWHEHRFYGNTEFN 86 Query: 88 FLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146 + IEPSA + ++ L RELI+ + T+ P +RL VL D+L + Sbjct: 87 CVSIEPSARPFADDAPVVVAVTGLVRELIVEGSR--TSDPTCPAQQRLRSVLLDQLRRTD 144 Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206 + L L S ++ ++ +L S+R L+RL+ E GL++ QW Sbjct: 145 ETALSLRTPSDDRLVHACAIVTADLTRNHSLADLGRTVGASKRTLSRLLRDELGLTYPQW 204 Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 R ++L AL L +G V +VAH G+ + +AFI +++ LG TPG A Sbjct: 205 RTSVRLHRALILLAEGAGVTEVAHRCGWATPSAFIDAYRRVLGHTPGSRRA 255 >UniRef50_B0TZR0 Transcriptional regulator, AraC family n=1 Tax=Francisella philomiragia subsp. philomiragia ATCC 25017 RepID=B0TZR0_FRAP2 Length = 264 Score = 202 bits (515), Expect = 8e-51, Method: Composition-based stats. Identities = 80/258 (31%), Positives = 131/258 (50%), Gaps = 2/258 (0%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 M L + ++ + A + S H H + QLIL G I VE +W Sbjct: 1 MQDTLTTD-FDLSSYPNALIVLKSQIKDCNEESEYHSHSEAQLILPTKGLIQSNVEAKIW 59 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIE-PSAVTMPTTCCTLKISPLCRELILTLA 119 VP A+WIP V HSN +T ++C F++ V MP C L ISPL +ELIL L+ Sbjct: 60 AVPLGSALWIPSYVYHSNLITKGGQMCMTFVDKLMLVNMPKKACVLYISPLIKELILYLS 119 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 +T ++ +++ VL D+L + + + S ++ + P ++ + Sbjct: 120 QQTVLEQLNYENQKIASVLIDQLSKMLPTFYNFSLPSEKILQEVAFQWLSKPTKYKYISD 179 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 A ++S + LAR I K+ G++F W++QL +++ALQ L +G +V V+ LGY+ST+ Sbjct: 180 MAYECSVSSKTLARKIKKDIGMNFSDWKKQLHIVVALQKLYEGYSVNWVSEYLGYESTST 239 Query: 240 FITMFKKGLGQTPGRYIA 257 F+T FK+ +P RY+ Sbjct: 240 FVTFFKRIFKCSPKRYVK 257 >UniRef50_A0R133 Transcriptional regulator, AraC family protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R133_MYCS2 Length = 257 Score = 202 bits (515), Expect = 9e-51, Method: Composition-based stats. Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 3/247 (1%) Query: 13 DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72 D +A E+ +P H+HR+ Q + + G + E+ W+VP + AV IP Sbjct: 9 DNLARDVLALATDYSYGEVLAP-HRHRRAQFLYGVGGTMDVRTEHGSWLVPTERAVLIPP 67 Query: 73 GVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131 +H+ + L+IEP AV PT C + + L REL++ + + Sbjct: 68 QTQHAVTMWG-VSTRSLYIEPGAVPWFPTRCTVVDVPTLLRELLVAAVAVPLDRPPDARD 126 Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191 L + E+ L LP+ + P G WA +SER + Sbjct: 127 AALFALTLHEVAGCTSLPLDLPLPQPGALSEQCRRFLAAPRIDTTTGWWANALHVSERTV 186 Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251 ARL KE ++ +W+++ ++ +L+ L +G V VA LGY S AF TMF + LG + Sbjct: 187 ARLFRKELSMTVAEWQRRACVLHSLRQLTQGVAVSAVASDLGYSSPAAFSTMFSRALGTS 246 Query: 252 PGRYIAR 258 P + R Sbjct: 247 PSAFSPR 253 >UniRef50_A0KHN7 Transcriptional regulator, AraC family n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KHN7_AERHH Length = 268 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 71/237 (29%), Positives = 119/237 (50%), Gaps = 1/237 (0%) Query: 32 TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91 S H H GQL L G + +++ + P Y +W+P +EH++ + +++ Sbjct: 31 ASAPHSHPWGQLSLISLGVMEIVLDDHRLVAPADYLIWVPADLEHASYNQQALDYTSIYV 90 Query: 92 -EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150 A +P L+++PL R ++ +R + R ++L ++L + Q Sbjct: 91 NHALAARLPAEPRLLQMTPLIRAILADFCDRKLGHMEDEWDVRQAELLVEKLTRTRCQDS 150 Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210 +LP+S + M+ + P + L QWA +ER LAR V+E G++F QWR +L Sbjct: 151 YLPMSQDKLLAPMLAALHSDPADPRTLAQWAEQLHTTERTLARRCVRELGMNFGQWRARL 210 Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSA 267 +L+ AL L VQ++ LGY ST+AFI MF + LG +P RY +L + Q+A Sbjct: 211 KLLKALAWLKGELPVQEIGWRLGYGSTSAFIAMFNRELGCSPQRYRQQLGIGAGQAA 267 >UniRef50_C4WPU9 AraC family transcriptional regulator n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WPU9_9RHIZ Length = 260 Score = 202 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 2/238 (0%) Query: 10 YEPDRHHEA-AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAV 68 + D + +A + H HR+GQL+ G +T E +M+P YAV Sbjct: 18 HAIDYQNLPRPLAVMRREYKTGMNFGWHSHRRGQLLYGNTGYMTALTEEGAFMLPSGYAV 77 Query: 69 WIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRA 127 + + H+ + E+ +++E + + + LK+S L I LA Sbjct: 78 LLRPDLPHAVETFGETEMYSVYVEENISRDLWEETRVLKVSALLDASIQALAKEPLLYDE 137 Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187 R L ++ DE+ +Q L +P+ + ++R + + P + WA MS Sbjct: 138 NGRGRHLSALILDEIRCAGRQPLTVPLPTEKQLRKLCRNLLGNPGLDLTIDDWAEEVGMS 197 Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245 R + R +ETG+SF +WRQ+L+ ++ +G + + GY S + + K Sbjct: 198 RRTMTRKFRQETGMSFIEWRQRLRASHVMRRQAEGVPLAMASVEAGYQSVSTLRKVMK 255 >UniRef50_B4SKF1 Transcriptional regulator, AraC family n=2 Tax=Stenotrophomonas maltophilia RepID=B4SKF1_STRM5 Length = 267 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 108/247 (43%), Gaps = 1/247 (0%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 P + + H H GQ G + ++ + PP YA+WIP Sbjct: 16 PTFSQLPGPIYFRQGAMEPTNWGTHSHPWGQFNFVAQGVMEMKIDGEWMVSPPHYAIWIP 75 Query: 72 GGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130 G+ H ++ + ++ P+ + +P C L++SPL REL+ LA + T P Sbjct: 76 PGMAHYSRNRSALAYRSAYLSPALSRRLPVRCHALEVSPLLRELLHELAQQGVTDPKTPA 135 Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190 +R+ V+ D++ LPV+S ++ ++ + K ++ A MS R Sbjct: 136 QKRMAAVVIDQIVNAAVLPSFLPVASSDVLKQVMVHVEKHLSAAESVADIARRHHMSVRK 195 Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250 L RL E G+S WR +++ + A + L + ++A LGY +AF MFK+ Sbjct: 196 LERLARSELGMSLGDWRGRVKFVRATEALCTRRPISRIAEELGYSGVSAFAEMFKRHAQC 255 Query: 251 TPGRYIA 257 TP +Y Sbjct: 256 TPDQYRK 262 >UniRef50_D1UHS6 Transcriptional regulator, AraC family n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UHS6_9BURK Length = 276 Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 3/249 (1%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 + P H H+ Q++ A+ GA+T + ++ P+ AVW+P G+ H +E Sbjct: 25 PAQRFFPEHSHQWHQMVYAISGALTVISDGGSIVISPEQAVWLPTGLRHRVGSLLGSEFR 84 Query: 88 FLFIEPSAVT--MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 L+I + + +SPL R LI+ + R+ Q++ D+L + Sbjct: 85 SLWIADETGSTLAGVSPMVFAVSPLLRALIVEATAIAGQPDDDGYVGRITQLILDQLRRA 144 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 LP + + E + P + +WA MS R LAR V ETG+S R Sbjct: 145 RPLPTALPWPRDDTLAQLCEKLHADPADPRGPEEWAQRLGMSARTLARRFVAETGMSLRS 204 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY-IARLTTVSP 264 WR++L+L A++ L G V + A LGY ST+AFI F+ LG +P + R V+ Sbjct: 205 WRRRLRLFRAIELLGGGMDVTRTALELGYSSTSAFIYAFRLELGSSPQAFMRGRSDRVAS 264 Query: 265 QSAKPDPRQ 273 P + Sbjct: 265 DPVTPSQQD 273 >UniRef50_Q2NTH9 Putative transcriptional regulator n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NTH9_SODGM Length = 268 Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 97/216 (44%), Positives = 130/216 (60%) Query: 7 LNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQY 66 L YEPDR A A ++ + +P +QHRKGQLI+ALHG ITC + +AL MVPP Sbjct: 8 LTHYEPDRDRNLATAMRLNVVQSAMETPFYQHRKGQLIMALHGGITCELTDALLMVPPHC 67 Query: 67 AVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQR 126 AVWIP HSN T NA CF+F+EP + CTL ISPL ++LIL LA Sbjct: 68 AVWIPADTPHSNHATVNARFCFVFVEPIFPGLLARSCTLFISPLLQQLILHLAELPGDYA 127 Query: 127 AEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAM 186 + T RL V+ ++L P++ L LP SSHP+IR + + + P E L WA M Sbjct: 128 LDLPTGRLAVVMLEQLANMPEENLSLPFSSHPRIRRITDTLNHSPAERRTLPAWASLVGM 187 Query: 187 SERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKG 222 +ER+LARL +KETG++F RQ+LQLI++++ L Sbjct: 188 NERSLARLFIKETGMTFGCRRQRLQLIISIRELACS 223 >UniRef50_A9BQK3 Transcriptional regulator, AraC family n=8 Tax=Burkholderiales RepID=A9BQK3_DELAS Length = 309 Score = 200 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 70/272 (25%), Positives = 114/272 (41%), Gaps = 25/272 (9%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 A P H H Q+ ++L G + + + PP AVWIP G+ Sbjct: 17 QRPVRAKQHRLSARTRVIP-HSHSWAQIAISLDGVLHLSAPQGTLIAPPSKAVWIPPGLV 75 Query: 76 HSNQVTANAELCFLFI-------EPSAVTMP-----------TTCCTLKISPLCRELILT 117 H+ + A+L +++ P +P C L++SPL RELI Sbjct: 76 HAVAMVEEADLVSIYVLQDDPAQGPVLPDLPSCGVACNPQDWARCRVLEVSPLMRELITA 135 Query: 118 LANRTTTQRAEP-----MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPV 172 L ++ Q A L +L +EL + + L + + ++R + E + P Sbjct: 136 LPKQSDDQPAPDAATLQREHHLSALLLEELRRASEVHLGVNMPQDKRLRMLCEAVVADPT 195 Query: 173 EWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTL 232 + +L WA S R +ARL ++ G SF WRQQ+ L L +G +Q++A L Sbjct: 196 QHESLADWAADTGASPRTVARLFQQQLGCSFTTWRQQVVLAHGLSLAARGLPIQQIAAEL 255 Query: 233 GYDSTTAFITMFKKGLGQTPGRYIARLTTVSP 264 GY S +AF M + +G P R+ + + Sbjct: 256 GY-SPSAFSAMVHRTVGMPPARFFGQQAGSAA 286 >UniRef50_C3X452 Putative uncharacterized protein n=2 Tax=Oxalobacter formigenes RepID=C3X452_OXAFO Length = 254 Score = 199 bits (507), Expect = 7e-50, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 105/239 (43%), Gaps = 7/239 (2%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 + P H + + G + E W V P W+P + + + Sbjct: 15 PAGIAQPGHAQNESWFVYLEKGFLAVEDERGYWTVLPGRIGWMPPHFHYEIRAYGHVAGI 74 Query: 88 FLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTT------QRAEPMTRRLIQVLFD 140 + P +P L IS L ++ Q RL+QVL D Sbjct: 75 CASLTPLLCAGLPEIPSALAISSLVAPILERAVTWQPDGVGGVFQPLPARQERLLQVLLD 134 Query: 141 ELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETG 200 EL Q Q L + ++ + + K P E + +WA +S R+++R +ET Sbjct: 135 ELRYSSQGQARLLLPKDKRLNYLAREILKNPGERRTVEEWAERMRISSRSISRHFSRETN 194 Query: 201 LSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 ++F QWRQ LI+A++ L +G++V++ A ++GY++ +AFIT FKK GQTP ++ + Sbjct: 195 MTFAQWRQNASLIVAMKRLAEGESVREAARSVGYENVSAFITSFKKAFGQTPAQFRQQF 253 >UniRef50_C8QA12 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QA12_9ENTR Length = 282 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 4/246 (1%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 P+ AV+ + T H+H GQL G +T + ++ PP+ W+P Sbjct: 27 PNAPKVIAVSLSKELARERHT---HRHAAGQLYCLKQGLMTVNTPSGIFANPPRLVGWVP 83 Query: 72 GGVEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130 EH+ + + I+ A +P + + L LA T Sbjct: 84 PHFEHAIVGPGQVQGWTVLIDEVLAAPLPDHPVLMSCPAVLELLAERLATLTPALWGSER 143 Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190 RL QV DEL + Q L LP+ P++ + ++ P + + A + S R+ Sbjct: 144 YHRLGQVFLDELYEATVQPLTLPLPEDPRLLQIARLLIDSPSDMRTGPELARWAGFSPRS 203 Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250 L+R TG+S ++RQ +L+ +L+GL G++VQ+VA +G+++ +++I+ F+ G Sbjct: 204 LSRHWASATGMSLTKYRQTSRLLKSLEGLAAGNSVQQVAWQVGFENVSSYISAFRHAFGS 263 Query: 251 TPGRYI 256 TPG+Y Sbjct: 264 TPGKYF 269 >UniRef50_A5FK83 Transcriptional regulator, AraC family n=3 Tax=Bacteroidetes RepID=A5FK83_FLAJ1 Length = 273 Score = 199 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 6/243 (2%) Query: 20 VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79 +C H EL P H+H K QL+ A + T E + +P ++ +WIP GVEHS + Sbjct: 22 SIYCHHDLMGELFIPPHRHVKAQLLYAEGDVVFVTTETKTYFLPARHFIWIPSGVEHSIE 81 Query: 80 V-TANAELCFLF--IEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136 + + + L+ +E ++ L +++L + + + Sbjct: 82 PKSESVTMRNLYFPVEKDENDFYKVEGIYPVNNLLLQMMLFTNRWNGDLKKGTPNFAIAK 141 Query: 137 VLFDELPQQPQQ--QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 + LPQ L LP ++ ++ + E A F SER+L RL Sbjct: 142 AIKAILPQICTNNLPLELPQPKDKRLSKILRYIENNLGETILFADVAHEFGFSERSLYRL 201 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253 K+ G+SF Q+ +++ A++ L++ +V++VA +GY+S F F K LGQ P Sbjct: 202 FQKDLGMSFIQYYTIRRILKAIELLLERKLSVKEVAEEVGYNSVPTFSNTFFKILGQRPS 261 Query: 254 RYI 256 Y+ Sbjct: 262 DYL 264 >UniRef50_D1WVC3 Transcriptional regulator, AraC family n=3 Tax=Actinomycetales RepID=D1WVC3_9ACTO Length = 283 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 4/230 (1%) Query: 37 QHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAV 96 HR+ +L+ + G +T LWMVPP +W+P G H + +A A F+ P V Sbjct: 55 AHREHELLWSTTGNVTVEAAGHLWMVPPSLGIWLPAGTPHRVRASAGAVTYATFLSPELV 114 Query: 97 TM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVS 155 + + + L REL+L N + A RL +V D + L +P+ Sbjct: 115 AVDWAGVVGIPMIRLLRELLLHNQNEEMSTEA---RLRLQRVGVDLIRPVRTVSLDIPLP 171 Query: 156 SHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMA 215 P++ T+ E + P + +WA +S R L R ++TG+S QWR +++ A Sbjct: 172 KTPELLTIAERIIADPADDRTTEEWARMIGLSGRTLMRWFQRDTGVSLTQWRILVRVRSA 231 Query: 216 LQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ 265 L + G V V+ LGY + + FI +F++ G TP Y + V+ Sbjct: 232 LIDIAAGKPVVAVSRRLGYANPSTFIDLFRQVTGHTPAAYFRSVNGVAEP 281 >UniRef50_B5GYF3 AraC-family transcriptional regulator n=4 Tax=Actinomycetales RepID=B5GYF3_STRCL Length = 283 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 69/246 (28%), Positives = 110/246 (44%), Gaps = 5/246 (2%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 EP AA+ P H HR +L+ G +T + + ++ V Y +W+ Sbjct: 6 EPLPESAAAILAGSRIVPAPTEWPPHAHRLHELVWVRGGTLTSRMGDRVYTVVEGYGLWM 65 Query: 71 PGGVEHSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEP 129 P G+ H + TA AEL F P + T + ++PL L+ L+ A Sbjct: 66 PAGMVHEGRATAQAELFHAFFAPDRIPFAFTEPMAITMTPLLESLLTHLSCADIDGEARA 125 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 V+FD + +Q L + P+I + E + P + +L +WA S+R Sbjct: 126 RAE---SVVFDVIRPSERQ-FALRLPGDPRIDAIAEALLDDPSDGRSLEEWARLLGTSDR 181 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 + R + TGL F QWRQ L++ AL L + V V+ LGY ++FI F++ +G Sbjct: 182 TITRAFRQATGLPFAQWRQMLRVHRALMLLAEDIDVTTVSEVLGYAQPSSFIVAFRRVMG 241 Query: 250 QTPGRY 255 TPG + Sbjct: 242 ITPGAF 247 >UniRef50_D1XRU9 Transcriptional regulator, AraC family n=4 Tax=Actinomycetales RepID=D1XRU9_9ACTO Length = 272 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 66/251 (26%), Positives = 102/251 (40%), Gaps = 4/251 (1%) Query: 6 NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65 N++ + D A + H+HR+ Q + G + W VPP+ Sbjct: 3 NVSLADVDHVDRAVLPIGTDY-PPGHVLDWHRHRRAQFLYGATGVMVVDTAEGTWTVPPE 61 Query: 66 YAVWIPGGVEHSNQVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTT 124 AV IP H ++ L+IEP AV P TC +++ PL REL+L + Sbjct: 62 RAVLIPAATRHRVRMLG-VSTRSLYIEPGAVPWWPGTCTVVEVPPLLRELLLVAVDLPLD 120 Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184 ++++L E+ ++ H+ + + + P WA Sbjct: 121 YSLAGREGSIVELLLHEIAERAPLPFHVAIPVSADLAGLCRAYLAAPDAGVTNAAWAART 180 Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244 AMSER R ETG S WR + +L+ A+ L +V +VA LGY S AF F Sbjct: 181 AMSERAFTRRFRAETGDSPAVWRSRARLLAAVPLLR-TASVSEVAGRLGYASPAAFTAAF 239 Query: 245 KKGLGQTPGRY 255 + G P R+ Sbjct: 240 TRAFGLPPSRF 250 >UniRef50_B9TN09 HTH-type transcriptional repressor of iron proteins A, putative n=1 Tax=Ricinus communis RepID=B9TN09_RICCO Length = 221 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 66/218 (30%), Positives = 98/218 (44%), Gaps = 6/218 (2%) Query: 46 ALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANA-----ELCFLFIEPS-AVTMP 99 G I ++PP WIP + H+ V N + + PS V P Sbjct: 4 PAQGVILVEAGGNRQVLPPGRLGWIPPLMPHAASVHGNTLRPGLAGHTIHLAPSLCVGFP 63 Query: 100 TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPK 159 L++SPL L+ + + RL+ V DE+ LHL + HP+ Sbjct: 64 AQSLALRMSPLAVSLMERMFRWPNGTPPDAAGLRLMNVFLDEMRAAAPDPLHLVMPRHPR 123 Query: 160 IRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGL 219 + M +A+ P + L WA S R+L R ETG+S WRQ +L ++ L Sbjct: 124 LLAMAATIAENPADETDLDAWAQQLGWSRRSLTRHFRNETGMSVVAWRQVARLQKGMELL 183 Query: 220 VKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 G +V VA +LGYDS ++FI +F++ LG TP R+ A Sbjct: 184 NGGASVTTVALSLGYDSVSSFIALFRRILGTTPARFAA 221 >UniRef50_B4SPX2 AraC protein arabinose-binding/dimerisation n=2 Tax=Stenotrophomonas maltophilia RepID=B4SPX2_STRM5 Length = 266 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 9/259 (3%) Query: 6 NLNGYEPDRHHEA----AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 ++ +PD H +A A I A + S HQH + QL+ G T + + + Sbjct: 4 DMAWLQPDAHFDADAWSAPVLGIAASLADHDSGWHQHARAQLLYTRQGCTRLTYGDRISL 63 Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLAN 120 +PP A WIPGG+ H Q+ + L+ + + + +P + + PL + L+ +A Sbjct: 64 LPPARAAWIPGGLRHRAQMRQAVDYRSLYFDATLSAQLPRQPAIIGVGPLLQALLEPIAQ 123 Query: 121 RTTTQRAE-PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 Q + P + + E+ P + LP+ P+I + + + P E LG+ Sbjct: 124 APFDQDWQAPRAHHQLALCVLEIAAAPVAPMDLPLPRDPRIARCLPLAEQLPPE---LGE 180 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 A +S R + RL+ ++TG+S++ WRQQ +L+ A++ L+ G V VA G+ + + Sbjct: 181 LAARTGLSARTVGRLMQRDTGMSYQAWRQQWRLMRAMELLLLGHRVAHVAQDTGFSAESP 240 Query: 240 FITMFKKGLGQTPGRYIAR 258 FI F+ G TP + Sbjct: 241 FIAFFRSMTGTTPAAFQRH 259 >UniRef50_D1BCS3 DNA-binding domain-containing protein, AraC-type n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BCS3_SANKS Length = 310 Score = 196 bits (498), Expect = 7e-49, Method: Composition-based stats. Identities = 63/228 (27%), Positives = 108/228 (47%), Gaps = 5/228 (2%) Query: 38 HRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT 97 HR+ +LI A G++T ++ LW VPP +WIP H + ++ P V+ Sbjct: 85 HREHELIWATAGSLTVETDDQLWTVPPGLGIWIPALTRHHVRAAPGTLTHVTYLAPERVS 144 Query: 98 --MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVS 155 + +S EL+L + T + RL QV+ D L L + + Sbjct: 145 PSWGAGIAGVTLSRAVHELVLHNKSSTLDDD---VRLRLQQVVVDLLVPVESASLDITMP 201 Query: 156 SHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMA 215 + ++R++ + + P + L +WA +S R L+R V+ETG++ +WR +++ A Sbjct: 202 TDLRLRSVADAIVADPADDRTLTEWADTLNISSRTLSRGFVRETGVTLTRWRILVRMRQA 261 Query: 216 LQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVS 263 L + G +V VAH LGY + + F +F++ LG TP Y+ L Sbjct: 262 LLEISSGRSVAAVAHRLGYANPSTFTDLFRQTLGHTPAAYLRSLDARE 309 >UniRef50_Q13JN4 Transcriptional regulator, AraC family n=13 Tax=Proteobacteria RepID=Q13JN4_BURXL Length = 285 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 5/248 (2%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 P+ H +A L H H Q++ A+ G + V +VPPQ AVW+P Sbjct: 16 PELHDDADARSLARHYPRGLRIDPHSHTWAQVLYAVSGVMWVEVGREALVVPPQRAVWLP 75 Query: 72 GGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130 G +HS + + E+ L++ V + +++ L RELI ++A T +P Sbjct: 76 AGTQHSIHMMSEVEMRNLYLHERNVGHLSRRSDVFEVNGLLRELITSIAEYEGTGARDPA 135 Query: 131 TRRLI-QVLFDELPQQPQQQLH--LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187 ++ EL P+ L LP +S ++ + + P + Q A S Sbjct: 136 YLDAAYRLAMLELAHAPRSSLRIALPDASDRRLEALCRAVIDNPSIAISFEQHAASVGAS 195 Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247 R LARL +E G+ F +WR+Q+QL +A+ L +G V +A +LG+ ++F MF++ Sbjct: 196 VRTLARLFTRELGVGFAEWRRQVQLAVAVSWLAEGRPVSSIARSLGFQ-PSSFSDMFRRE 254 Query: 248 LGQTPGRY 255 LG P + Sbjct: 255 LGAPPTGF 262 >UniRef50_D1BHF8 DNA-binding domain-containing protein, AraC-type n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BHF8_SANKS Length = 309 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 9/246 (3%) Query: 29 DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88 E+T P H+H + +L+ G+ + + W +PP AVW+P GV ++ A + + Sbjct: 42 GEVTWPAHEHAESELLWCASGSASLEADGRRWTIPPSLAVWVPAGVRNAAGAAAGSLVRA 101 Query: 89 LFIEPSAVTM---PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 F + +A + P + ++ R L++ R A RRL +V+ D L Sbjct: 102 TFFDVAATRLVDVPDVVTGVAMTDAVRVLLMHNHLRDLDDAA---RRRLHRVVLDLLVPV 158 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 P + L + +R + E + P + +WA + R LAR ETG++F + Sbjct: 159 PHESFDLLLPRTGHLRWVAESILADPGDRRTTEEWASRCGLHPRTLARQFHAETGVTFTR 218 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ 265 WR ++ A++ L G V V+ +GY S +AF+ F++ GQTP Y+ R +P Sbjct: 219 WRILARMQWAIRELALGAPVLAVSRQVGYRSPSAFLAHFRELTGQTPTAYVGR---PAPV 275 Query: 266 SAKPDP 271 +P P Sbjct: 276 VDEPGP 281 >UniRef50_Q28KW4 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28KW4_JANSC Length = 253 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 2/221 (0%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 S H H + Q+I ++ G + E W VP + + +P G+ H+ ++ + + Sbjct: 25 ESGYRSDWHSHPRHQIIYSVSGLMMTDTEGVRWAVPSGFGLIVPAGIAHTTKMIGDVSIE 84 Query: 88 FLFIEPSAVTMPT--TCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 L++ PS+ +C + IS + LI L R L Q++F EL Sbjct: 85 TLYVSPSSRGRSAFESCRVVSISAMLASLISELCREELRDRNSRKAFHLRQLIFLELSDA 144 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 P L + P++R + + + P + QWA S R+ R +T +FRQ Sbjct: 145 PTSHLAVKYPVDPQLRRVCDALIADPANSWTIDQWAFEIGKSRRSFTRAFYSQTDQTFRQ 204 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKK 246 W Q+L+ +ALQ +G +++++A LGY S + M +K Sbjct: 205 WTQRLRCQLALQKRAEGQSLERIARDLGYGSRYSLEAMMQK 245 >UniRef50_C3JM12 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus erythropolis RepID=C3JM12_RHOER Length = 278 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 74/252 (29%), Positives = 110/252 (43%), Gaps = 12/252 (4%) Query: 11 EPDRHHEAAVAF--------CIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMV 62 E DRH A A I P H H + +LI + G + +EN LW V Sbjct: 23 ESDRHTPMARAVPAPFQLTTYIVETDHITRWPEHAHVEHELIWSDRGVVNMIIENQLWTV 82 Query: 63 PPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANR 121 P +WIP GV H Q + P C + +S R L++ LA+ Sbjct: 83 TPGVGLWIPRGVLHEGQANPHVAFRATLFTPELWTPAWNEPCIVTLSEAARALLIHLAH- 141 Query: 122 TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWA 181 T R QV D L +P+ P++R +V+ + P + +L QWA Sbjct: 142 --TGMPAEQRLRAQQVCVDLLTPASAPHFDVPIPRDPRLRMLVDKVLSDPADDRSLDQWA 199 Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241 +S R + R+ E LSF QWR +++ AL L G +V V+ +GY ++++FI Sbjct: 200 HVLNLSRRTVTRIFAAELALSFAQWRTLVRMSTALGMLGTGMSVNAVSRRVGYGTSSSFI 259 Query: 242 TMFKKGLGQTPG 253 F+K +G TPG Sbjct: 260 AAFRKTVGYTPG 271 >UniRef50_A6SYJ9 Transcriptional regulator, AraC family n=2 Tax=Oxalobacteraceae RepID=A6SYJ9_JANMA Length = 249 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 64/237 (27%), Positives = 112/237 (47%), Gaps = 10/237 (4%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 +H HR+ QL+ A G + T W+VPP AVW+P G+EH+ + A+ E+ L I+P Sbjct: 16 LHVHREAQLLFASSGVMQVTTPKGHWLVPPARAVWLPPGIEHAVDMLADIEMRALLIQPE 75 Query: 95 AVTMPTTCCTLK------ISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQ 148 + L+ + PL RE IL + + + L E Sbjct: 76 QLAQHPAAPRLQSEFVATVGPLLRETILGAFKADSHPQRLALLLELALFELVE---DEDA 132 Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208 + +P+ + R + +M+ P L A S R + RL ET L+F++WRQ Sbjct: 133 RTFMPMPHDARARRVADMILADPANGSELELLAYSAGASARTITRLFPAETNLTFKEWRQ 192 Query: 209 QLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSP 264 + +++ A++ L G +++++A LG+ S +F F++ +G TP + R + +P Sbjct: 193 RARIMAAVEALGNGQTSIKQLALQLGFSSVASFGHAFRQIMGMTPSEMMRRSESAAP 249 >UniRef50_Q1ZV01 Transcriptional regulator, AraC family protein n=2 Tax=Photobacterium angustum S14 RepID=Q1ZV01_PHOAS Length = 283 Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats. Identities = 63/255 (24%), Positives = 116/255 (45%), Gaps = 9/255 (3%) Query: 9 GYEPDRHHEAAV---AFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65 ++PD V A H L S +H H KGQL+ G +EN+ + + P Sbjct: 18 HFDPDAIKSPIVPIYATFSHKEEHSLRSKMHSHSKGQLVYIKSGTAIVRLENSTYSILPN 77 Query: 66 YAVWIPGGVEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTT 124 +WIP G+ H+ + N + ++I+ + T +S L E+I T+ + Sbjct: 78 QMIWIPSGMIHNVILRNNVDFRAIYIDQKQFPRLSKNFETFFVSVLLEEIIETICLSSFH 137 Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVE---WGALGQWA 181 T +Q + + + + + PK + + + K + + L + Sbjct: 138 TDWMVGTEFHLQSIL--IMKMQKLSSTPQWPAFPKDKRVCNYLLKFYEKGEMFPRLYELV 195 Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241 SER + RL V+ TG+S+++WRQ +L++A++ L ++ ++AH L + +T+AFI Sbjct: 196 SNTGASERTIHRLFVQSTGMSYQKWRQHARLMLAIELLSTNKSITEIAHHLEFSTTSAFI 255 Query: 242 TMFKKGLGQTPGRYI 256 + FK TP +Y Sbjct: 256 SFFKSYQNITPKKYR 270 >UniRef50_C0YRY4 AraC family transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YRY4_9FLAO Length = 304 Score = 194 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 112/269 (41%), Gaps = 10/269 (3%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 ++ +N + ++ +A + H T +T+ +H H QL+ A G + + W Sbjct: 35 LYTMNDSHFKAVEEDDAE-FYVYHVLTGNVTTEIHYHSSAQLVYAEGGIVHVFTDQKHWY 93 Query: 62 VPPQYAVWIPGGVEHSNQVTAN-AELCFLFI--EPSAVTMPTTCCTLKISPLCRELILTL 118 +P + +WIP G H T+ +L + E + ++ L RE+I Sbjct: 94 LPARCFMWIPAGTPHYIFSTSPKVDLFNFYFKKEENESGFFDEINIYSVNNLLREMIFYT 153 Query: 119 ANRT-----TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVE 173 + + L VL ++ + + P + + + + Sbjct: 154 KDWDGKITKNDHSKYYFLKALKGVLQEKKHKHLAFPIQHPFPKDETLLKIARYIHANLEK 213 Query: 174 WGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTL 232 + A F MS R L+R + G+++ ++ + L++ +L+ +++G + ++A + Sbjct: 214 PLTIESTAKEFGMSTRTLSRKFKEILGMNYVRFLRALRITRSLELMLEGKYNMYEIAMMV 273 Query: 233 GYDSTTAFITMFKKGLGQTPGRYIARLTT 261 GY+S ++F +FKK +G P Y +L Sbjct: 274 GYNSLSSFSNIFKKIIGVPPTEYQHKLRG 302 >UniRef50_C3JND7 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus erythropolis RepID=C3JND7_RHOER Length = 285 Score = 194 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 3/230 (1%) Query: 26 AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85 A + T +H+H +L+ A+ G + ++ VP ++WIP V H + E Sbjct: 42 AVDSDYTWEMHRHSDHELLWAIDGVLEVRTPETVYTVPSGVSLWIPSFVPHEVTARSGTE 101 Query: 86 LCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 L ++ S VT L PL +++ L T + RR D + Sbjct: 102 LSCTWLVASDVTGLDRVVALSTPPLLEQVLDHL---TRDDLTDAARRRAEAFAIDLVEPV 158 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 P+ +P+ + P +R + + + P + ++ +WA +S R L R ETGL+F + Sbjct: 159 PRLIFDVPLPTTPWLRQIADQLVASPADTRSVEEWAADAKVSTRTLTRRFPAETGLTFSE 218 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 WR +L+ A+Q L G ++ VA G+ S +AF F++ +G TPG + Sbjct: 219 WRMRLRAHHAMQLLALGRSISFVARKTGFRSESAFGAAFRRTMGVTPGEF 268 >UniRef50_D0J7V7 Transcriptional regulator, AraC family n=6 Tax=Proteobacteria RepID=D0J7V7_COMTE Length = 271 Score = 193 bits (491), Expect = 5e-48, Method: Composition-based stats. Identities = 65/255 (25%), Positives = 113/255 (44%), Gaps = 5/255 (1%) Query: 8 NGYEPDRHHEAAVAFCI----HAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63 + D H A + + P H H +G LI A G + + W+VP Sbjct: 9 GAHALDLQHAQASSLPVTGVEQRYPPGHVVPQHSHARGHLIYASEGVLLVESPSGQWLVP 68 Query: 64 PQYAVWIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRT 122 P AVW+ G+ H T LF++ + + +P L ++PL REL+ L Sbjct: 69 PTTAVWLRPGMLHQITATTAVRAYGLFVDEAWSAQLPARDGVLHVAPLVRELMTALVALP 128 Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182 P L +L +EL +LP +R + E M P + + A Sbjct: 129 HEGPHRPRDALLGSLLLEELSALAPLPYYLPWPQDALMRRICESMLSAPAQRTTVEALAR 188 Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242 A++ + L R +K TG+++ +W QQ++L+ ++ L++G + VA GY+S +A+ Sbjct: 189 QHALTPKTLHRRFLKSTGMNWGRWYQQMRLMASIPQLLQGMAITTVALESGYESHSAYSA 248 Query: 243 MFKKGLGQTPGRYIA 257 F++ G+ P ++A Sbjct: 249 AFRRQFGRPPSEFVA 263 >UniRef50_Q212B5 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q212B5_RHOPB Length = 268 Score = 193 bits (490), Expect = 6e-48, Method: Composition-based stats. Identities = 63/243 (25%), Positives = 109/243 (44%), Gaps = 3/243 (1%) Query: 13 DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72 D AA+ + D T +HQH G+L L G + N W++P + W+P Sbjct: 19 DGLDGAAMRSALTKTLDVFTRGLHQHPHGELFLLRAGYLKAQSPNGRWLIPAGHLCWVPP 78 Query: 73 GVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQR-AEPM 130 EH T + + +++ P +P C ++ + L +I L T + Sbjct: 79 FTEHGAD-TDSTQGVRIYLAPELCGVLPRDSCVMRNTALILAVIDRLTAPDRTAKVLTEP 137 Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190 +RL+ VL DE+ + + LP+ ++ E + P + L +A MS R+ Sbjct: 138 EKRLLGVLCDEIERARSTPILLPMPQDARLSRTAEKLLGSPNDQSDLDVFAAEAGMSRRS 197 Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250 R +TGLS +WRQ +L+ + L G +V + A LGYDS ++F+ + ++ G Sbjct: 198 FTRNFKLDTGLSIGEWRQIARLMHGIDMLAAGKSVTETAFALGYDSISSFVALCQRHTGM 257 Query: 251 TPG 253 +P Sbjct: 258 SPK 260 >UniRef50_A8L421 Transcriptional regulator, AraC family n=12 Tax=Actinomycetales RepID=A8L421_FRASN Length = 290 Score = 192 bits (489), Expect = 8e-48, Method: Composition-based stats. Identities = 64/258 (24%), Positives = 110/258 (42%), Gaps = 12/258 (4%) Query: 19 AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78 A+ + L + H H Q+ A+ G + A +++PPQ A WIP G+EH Sbjct: 28 ALGGSYLYEGERLVTGWHSHDLHQIEYAVAGVVEVETATAHYLLPPQQAAWIPAGLEHQA 87 Query: 79 QVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQ-RAEPMTRRLIQ 136 + + +P V P L ++PL RE+++ + +P+ Q Sbjct: 88 TMNTAVRTVSVMFDPRLVPHPGDRARILAVAPLIREMMIYALRWPIARAEHDPVADGFFQ 147 Query: 137 VLFDEL--PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 L + + L LP S+ P + + + +G+ + +SER L R Sbjct: 148 TLGHLVSEALDHEAPLSLPTSTDPIVSAAMAYTQNHL-DSVTVGEVSRAVGVSERTLRRQ 206 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLV-KGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253 GLS+R + Q +L+ A+ G +V +V+ +G+D+ +AF F + G+TP Sbjct: 207 FRSTLGLSWRSYLLQARLLRAMALFAVPGQSVLEVSTAVGFDNGSAFARAFSQYCGETPS 266 Query: 254 RYIARLTTVSPQSAKPDP 271 Y R+ SA P P Sbjct: 267 SYQRRI------SAAPQP 278 >UniRef50_D1XNW1 Transcriptional regulator, AraC family n=1 Tax=Streptomyces sp. ACTE RepID=D1XNW1_9ACTO Length = 291 Score = 192 bits (489), Expect = 8e-48, Method: Composition-based stats. Identities = 68/259 (26%), Positives = 111/259 (42%), Gaps = 9/259 (3%) Query: 12 PDRHHEAAVAFCIHAGTDELTSP----VHQHRKGQLILALHGAITCTVENALWMVPPQYA 67 P + F I AG + P H H +L+ G +T V + ++ V + Sbjct: 26 PPLPEQTTAPFAIVAGLRIPSVPTEWSPHAHPLHELVWVRGGTLTSRVRDRVFTVSTGHG 85 Query: 68 VWIPGGVEHSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQR 126 +W+P G H +VTA A F P ++++PL L+ L+ Sbjct: 86 LWMPAGTTHGGRVTAGARFYEAFFAPDRAPFAFEEPRAIEMTPLLESLLNHLSRTDLDAA 145 Query: 127 AEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAM 186 A ++ + Q ++Q L + +I + E + P + +L +WA + Sbjct: 146 ARARAESVVYDVL----QPSERQFALQLPGDARIDVIAEALLDDPADCRSLEEWARLLGI 201 Query: 187 SERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKK 246 S+R + R + TGLSF QWRQ L++ AL L +G V V+ LGY + FI F+K Sbjct: 202 SDRTVTRAFRQATGLSFAQWRQALRVHRALALLSEGLDVTTVSEVLGYAQPSTFIASFRK 261 Query: 247 GLGQTPGRYIARLTTVSPQ 265 +G TPG + A + Sbjct: 262 VVGTTPGAFSASAGSAPEN 280 >UniRef50_C9PG34 Transcriptional regulator AraC family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PG34_VIBFU Length = 245 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 4/233 (1%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 + H H + QL G + E W V W P G H +V + E Sbjct: 12 PQSAVTGWHTHLESQLFWVNRGILMVEAEQQRWTVASGCLAWNPAGCRHRTEVITDVEGE 71 Query: 88 FLFIEPSAV--TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 L+++ + + MP ++ L LI L+ T ++ + + +L E+ Sbjct: 72 LLYVQDATMLDAMPA-PKLIRCDDLTSALIKRLSG-TEYNASDTCEQAWLALLGSEISHA 129 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 P L LP+ + R + + P + A F +S R L RL ++TG++F Sbjct: 130 PATPLQLPLPEDKRARKVANYLIAEPENRLSQETLAERFGLSSRTLHRLFRQQTGMTFVH 189 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 WRQQ +L+ +L L G ++ +VA GYD+T ++I +F++ G TP Y+ + Sbjct: 190 WRQQSRLLHSLSLLEAGKSITEVALASGYDNTGSYIQLFRQRFGVTPKLYLRQ 242 >UniRef50_C3JWU5 Transcriptional regulator, AraC family n=4 Tax=Rhodococcus erythropolis RepID=C3JWU5_RHOER Length = 274 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 66/241 (27%), Positives = 115/241 (47%), Gaps = 6/241 (2%) Query: 28 TDELTSPVHQHRKGQLILALHGAI-TCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL 86 + + H+H + +LI G + T + W VPP +W+P G H+ + E Sbjct: 31 SHQRQWAPHRHPEHELIWGNSGGMLTVVADGITWEVPPSAGLWLPAGALHAVKAGPGTEF 90 Query: 87 CFLFIEPSAVTMPTT-CCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 + P A P+ +S L RE++L + R A R V FD L Sbjct: 91 FCTYFRPEAHAAPSGVPGLFGVSALLREVLLHMHRRNMPDEARSRAER---VAFDMLQPL 147 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 + +P+ + P+ + E + P + +L +WA S R L R+ + TG++F Q Sbjct: 148 EVAAVEVPMPTDPRALFVAEALVANPADQRSLSEWALTAGGSVRTLTRVFAQGTGMTFAQ 207 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ 265 WR Q+++ AL L G V V+ +GY++ +AF+ +F++ G+TPG + + +V+P+ Sbjct: 208 WRIQVRVRAALTYLAAGVPVSVVSRRVGYETPSAFVAVFRRVTGRTPGSMMNK-GSVAPE 266 Query: 266 S 266 S Sbjct: 267 S 267 >UniRef50_B5I4G1 AraC-family transcriptional regulator n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I4G1_9ACTO Length = 268 Score = 190 bits (483), Expect = 4e-47, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 2/226 (0%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 H H GQL A GA+ + W+ P +W+P HS++ ++ Sbjct: 29 AHGAEVAAHFHDYGQLRYAARGALVTATQVGTWVTPASRIMWVPPFAVHSSKAYGETDIR 88 Query: 88 FLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146 L + + +P S L RE L L + P R LI V+ EL + Sbjct: 89 VLSLPVTLTGQLPAEPSVFVASALLREAYLALMSEG-EPLESPRARLLIDVVLAELARAA 147 Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206 Q+ L LP S +++ + +++ P L + SER L+RL E +SF QW Sbjct: 148 QEPLRLPEPSDRRLKAVTDLLHMDPASPATLAELGHRAGASERTLSRLFGSELSMSFHQW 207 Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252 R L++ AL L G +V A LG+ + ++FI F + +GQTP Sbjct: 208 RTLLRIQRALIELSDGASVTATAIRLGWSNPSSFIDAFTELVGQTP 253 >UniRef50_B9K583 Transcriptional regulator n=3 Tax=Alphaproteobacteria RepID=B9K583_AGRVS Length = 251 Score = 189 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 9/229 (3%) Query: 34 PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93 P+H H + QL A G + E W+VP Q AVWIP V H V +A+L + EP Sbjct: 20 PIHAHDEAQLTFAASGMVQVHTEEGRWLVPSQLAVWIPARVPHRVDVLTDADLWMVHWEP 79 Query: 94 SAVTMPTTCC------TLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147 SA L+++PL + L+ ++ + +L+ EL Sbjct: 80 SAAQEWAPPVPLDQTFALRVTPLMQSLLEAAFMADVSREKGELVAKLM---LHELTSTAH 136 Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207 LP+ + + +M ++ ++A A S R L+RL ETGL+F+ WR Sbjct: 137 APTFLPLPTSTIGLRVADMALTDHQSLMSIDEFASRAATSVRTLSRLFPSETGLTFKAWR 196 Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 Q+ +++ ++ L KG + +VA G+ S +F F++ TP +++ Sbjct: 197 QRARIVQSMDLLAKGKPIARVAADFGFSSAASFSHAFRQVTAMTPTQFM 245 >UniRef50_D1VIF5 Transcriptional regulator, AraC family n=1 Tax=Frankia sp. EuI1c RepID=D1VIF5_9ACTO Length = 250 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 65/245 (26%), Positives = 106/245 (43%), Gaps = 4/245 (1%) Query: 13 DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72 DR A + + P+ QL+ GA+T + W +PP A+WIP Sbjct: 7 DRAEPAVRGYAVTHPPGVAALPIQA-GWDQLLYTASGAMTISTPAGSWFIPPHRALWIPD 65 Query: 73 GVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKIS-PLCRELILTLANRTTTQRAEPMT 131 G + + + + A + L+ P + + REL+L R +P+ Sbjct: 66 GAQATVRNRSPAAVRNLYFATPLGVAPPRAQAVAVPERFGRELLLHAVRRCPLDLGDPVH 125 Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191 L+ VL D+L P+ + LP S P+ + + P L A S R L Sbjct: 126 AALLTVLVDQLRGLPEASVWLPWPSDPRASDLATALVADPA--AGLTSLAHRVGASRRTL 183 Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251 R ETGLS WR++ +++ +L L G +V + A GY + +A++ FK+ LGQT Sbjct: 184 ERAFGAETGLSLGAWRRRARILSSLDTLAAGASVTQAAIEAGYATPSAYVAAFKQELGQT 243 Query: 252 PGRYI 256 P ++ Sbjct: 244 PRHFL 248 >UniRef50_C0YKZ5 AraC family transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YKZ5_9FLAO Length = 260 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 5/228 (2%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTAN-AELCFLFIEP 93 H H+KGQL+ G T+E ++++P +AVWIP H + +L +F + Sbjct: 30 FHHHQKGQLVYVESGFQYITIEEKIYLLPQNHAVWIPPNAVHKTNSHSEKIKLMIMFADI 89 Query: 94 SAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQ--QL 150 S + P+ +E+I + ++ ++ LF+ELPQ + L Sbjct: 90 STDNPFYHEISVFSVPPVLKEMIKYSEKWSKLMISDYNETLFLKTLFNELPQFVKHSLTL 149 Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210 H+ + ++ ++E + + + + +S R L R+ KETGL+ +++Q L Sbjct: 150 HICLPKDKRLTKVIEHLHSHYLNEIKMEDLSDAAFLSFRTLERIFKKETGLTLSKYQQML 209 Query: 211 QLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 ++I +L+ L G T+ + A+ +GY S AF F+ + P +I Sbjct: 210 RIIKSLELLSSGTLTISETAYEVGYKSVQAFTRSFQAVMQFRPTDFIK 257 >UniRef50_A8U313 Helix-turn-helix, AraC type:Arac protein, arabinose-binding/dimerisation n=1 Tax=alpha proteobacterium BAL199 RepID=A8U313_9PROT Length = 282 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 3/261 (1%) Query: 15 HHEAAVAFCIHAG--TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72 H EA VA HA + P H+H +GQL L L + + +W+VP +W+P Sbjct: 22 HVEADVAIIGHAASFAPGASVPWHRHSRGQLALTLARVMRVETPDKVWLVPRGSVLWLPA 81 Query: 73 GVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131 H + + L++ P A ++PT ++ +++ LA + R + Sbjct: 82 ETPHRSLAPEQRLMRSLYVRPDSAESLPTAPTAVEQGTPLADMVTWLAETYDSDRLDKAW 141 Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191 + + P + LP + P + + + + P +L WA F M+ R L Sbjct: 142 STVAGAALALVRPGPGVSIRLPQPADPALAVIADAVLADPAVEISLEDWAERFGMAGRTL 201 Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251 R + ETG+S+R WR+ L L +A + L+ G V VA GY T+AF+ F+ T Sbjct: 202 RRRVQAETGMSYRDWRRILGLTVAAERLLAGSRVTDVAFETGYAGTSAFVAAFRAAFQVT 261 Query: 252 PGRYIARLTTVSPQSAKPDPR 272 PG + R +A R Sbjct: 262 PGEFQRRAALRGRPAAGASGR 282 >UniRef50_C3JLV5 AraC-family transcriptional regulator n=2 Tax=Rhodococcus erythropolis RepID=C3JLV5_RHOER Length = 268 Score = 186 bits (472), Expect = 8e-46, Method: Composition-based stats. Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 6/232 (2%) Query: 31 LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLF 90 H+H + Q+ G + +W + ++ VW+PG V H + + + + Sbjct: 38 TAYGAHRHPEHQIAWMSEGTMQIAAGGNVWHLHSEHLVWLPGTVLHDMTLLSAGCMIAAY 97 Query: 91 IEPSAVTM---PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147 P T L++ L +L+ LA+RT M++ ++L+D L P+ Sbjct: 98 ARPDLRPGGPRWTQPLVLEVDALSAQLLRHLADRTIDDARRLMSQ---ELLYDILAAAPE 154 Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207 + L V + ++ + P + LG+WAG +S + L R V +TG++F QWR Sbjct: 155 RHDVLAVPRNAAASSVSARILADPADSRTLGEWAGELGVSSKTLMRAFVADTGITFGQWR 214 Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 + ++ +L+ L +G+ V VA +GY +++ FI F++ G TP RY +L Sbjct: 215 TRARMYASLEMLARGEGVNDVAPQVGYRTSSGFIAAFRETFGTTPARYGGKL 266 >UniRef50_C0YJ90 AraC family transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YJ90_9FLAO Length = 270 Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats. Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 9/254 (3%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 PD + F +H +++L P H+H KGQL G T++N ++VP ++ WIP Sbjct: 8 PDIDKDDKSVFVMHEKSEKLI-PFHKHTKGQLSYVEGGIAYITIDNKTYVVPARHFFWIP 66 Query: 72 GGVEHSNQV-TANAELCFLFI---EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQ-R 126 G+EH ++ L L+ + + + S L ++I Sbjct: 67 QGMEHILEIGHTATVLRSLYFYAHDDISDPFYSRLGIYPASELLIQMIKYTEIWDEKHVT 126 Query: 127 AEPMTRRLIQVLFDELPQQPQQQLH--LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184 A+ + L LP+ QQ L LP + H ++ +V + E L + F Sbjct: 127 AKDENFEFLVALKKILPKTHQQPLPIILPATHHKQMMKIVSYLEWNIGERLTLAHVSSKF 186 Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITM 243 +SER+L+RL + +SF Q+ + L+++ A++ L+ D + ++A +GY S +AF Sbjct: 187 GLSERSLSRLFKADMDISFLQYLKTLRIVKAIELLLNTDKPINEIADDVGYSSISAFSDT 246 Query: 244 FKKGLGQTPGRYIA 257 F + P Sbjct: 247 FHEFTQSRPSDLRK 260 >UniRef50_C3JVD6 Transcriptional regulator, AraC family n=3 Tax=Rhodococcus RepID=C3JVD6_RHOER Length = 277 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 63/258 (24%), Positives = 113/258 (43%), Gaps = 6/258 (2%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDE-LTSPVHQHRKGQLILALHGAITCTVENALW 60 + L ++ +E D E V + + D+ +T H HR +++ G + +W Sbjct: 20 IDELVVSEHELDDEPEDLVLWGGASSADQPVTWETHAHRSNEILFPRSGIVVVRSGAQMW 79 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLA 119 + P +WIP HS +V A A+ ++ ++ + +PL EL+L L+ Sbjct: 80 TLLPGRGLWIPALHRHSVRVAAGAQFLTVYCAVGQGPSLGDHPVAVHGTPLLYELLLHLS 139 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 R + A R V FD L ++ + + + + + P + + G Sbjct: 140 AREMSDDARRRAER---VFFD-LVVPGDERGAMKIPDSGPVGRIARDLLSHPEDPRSFGD 195 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 WA +S LAR +TG+SF QWR L++ +A+ L + V VA +GY + ++ Sbjct: 196 WANEIGVSTSTLARRFKVDTGVSFGQWRVLLRMNVAMSLLGQDVAVADVAEQVGYSTPSS 255 Query: 240 FITMFKKGLGQTPGRYIA 257 F+ FK+ G TP + Sbjct: 256 FVAAFKQSTGVTPMAFRK 273 >UniRef50_A5VF29 Transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria RepID=A5VF29_SPHWW Length = 274 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 6/247 (2%) Query: 21 AFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV 80 F ++ H H QLI A+ G I + A ++P A WIP G H + Sbjct: 25 GFSFRDPERAISYDWHDHPYHQLIYAVAGTIQIETDAARHLLPTGRAAWIPAGQRHRT-L 83 Query: 81 TANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTT-QRAEPMTRRLIQVL 138 + + L+ P AV L SP+ RE+IL +P+ R L Sbjct: 84 VHDVDTASLYFAPDAVADGGGRVRILVASPVMREMILHALRWPQAVAERDPVARSFFGTL 143 Query: 139 FDELPQQ--PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196 + + L LP + HP I +++ A P L AMSER+ R Sbjct: 144 ALMCGEWLESELPLSLPGARHPGIVRAMDLAAVDPA-GIDLPAALAAAAMSERSFRRAFS 202 Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 +ETG+ ++ W QL+++ A+ L G V VA +GY S +AF F + G+ P Y Sbjct: 203 RETGMGWQAWVAQLRILRAMGMLADGGRVTDVAAEVGYASLSAFAKAFAQLAGEGPADYR 262 Query: 257 ARLTTVS 263 +R+ + Sbjct: 263 SRVRGRT 269 >UniRef50_D1BBW6 DNA-binding domain-containing protein, AraC-type n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BBW6_SANKS Length = 257 Score = 184 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 6/234 (2%) Query: 25 HAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANA 84 A E S VH + +L+ AIT +W+VPP +W+P G H +A Sbjct: 21 AAEAREWVSAVHH--EHELLWCAGRAITVEARGQVWLVPPTLGIWLPAGTVHRVTAHPDA 78 Query: 85 ELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELP 143 + +++ S V + + ++PL EL+L + L + +++ Sbjct: 79 SVFAAYLDTSREVPGWDSILGVPVTPLLHELLLH---NRRAAMPDASRHALQALAVEQMV 135 Query: 144 QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203 + L + +R + E + P + +L WA MS R R + +TG +F Sbjct: 136 PLTAATIELRLPRDLALRGVAEQVVADPGDGRSLDAWASSIGMSPRTFMRRFLDDTGSTF 195 Query: 204 RQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 QWR ++ AL L +G V VA +GY ST F+ +F++ G TP Y Sbjct: 196 AQWRILARVAAALTMLAEGRAVATVARAVGYSSTGTFVALFRRTTGMTPAAYSR 249 >UniRef50_Q84HW2 Transcription regulator n=1 Tax=Rhizobium sp. TAL1145 RepID=Q84HW2_9RHIZ Length = 200 Score = 182 bits (463), Expect = 8e-45, Method: Composition-based stats. Identities = 64/198 (32%), Positives = 107/198 (54%), Gaps = 2/198 (1%) Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTT--CCTLKISPLCRELILTLA 119 VPP A+WI +H V AE+ L+++P+ PT+ C ++++PL RELI + A Sbjct: 3 VPPTRALWIRANTDHKLSVARAAEIRVLYVDPAIGCAPTSSSCVVVEVTPLVRELISSCA 62 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 + RL +VL D++ + + LP+ + P+ +V+M+ + P L Sbjct: 63 GLPWDYQPGSKEARLCEVLLDQIATLDRSPVDLPIPTDPRGLRIVDMLKREPSSREPLAA 122 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 A S R + R+ V+ET L+F WRQ+L+L+ AL+ L G+ V VA +GY+S ++ Sbjct: 123 LAARVGASSRTIERIFVRETHLAFGAWRQRLRLLAALELLAYGEAVTNVALDVGYESASS 182 Query: 240 FITMFKKGLGQTPGRYIA 257 F+ F++ G TP R+ Sbjct: 183 FVAAFRETFGTTPARFFK 200 >UniRef50_UPI000050FCF9 AraC family transcriptional regulator n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FCF9 Length = 272 Score = 182 bits (463), Expect = 8e-45, Method: Composition-based stats. Identities = 59/232 (25%), Positives = 96/232 (41%), Gaps = 4/232 (1%) Query: 25 HAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANA 84 A E H H +L+ G T T++ W + P +WIP GV HS A Sbjct: 41 EAMEHETYWSEHSHPTHELLWREAGVGTVTIDQRTWTITPPLGMWIPAGVRHSGWTPAGV 100 Query: 85 ELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ 144 + + + I+PL L +R + L + + ++ Sbjct: 101 VVYAAQFSLDNPLVSDRPTAIAITPLL----RLLLDRLQHTDPGTSSYSLTEAMILDVMT 156 Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204 +L L + S+P I + + +GP + +L WA +S R + R ETGL F Sbjct: 157 PADNELLLHMPSNPLIAPIANAIIEGPADASSLQDWARKLGISGRTITRAFEAETGLGFG 216 Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 +W ++ A+ + G V + A +GY S +AF T FK+ G TPG++ Sbjct: 217 RWATTARVQHAVSMISLGGEVDEAAAGVGYRSVSAFTTAFKRITGTTPGQFR 268 >UniRef50_Q7NRR7 Probable transcriptional regulator n=1 Tax=Chromobacterium violaceum RepID=Q7NRR7_CHRVO Length = 250 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 96/229 (41%), Gaps = 2/229 (0%) Query: 27 GTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL 86 G + H H GQLI GA+ C E W++ WIP GV HS + A Sbjct: 15 GVSRCGTASHVHAVGQLIYLRRGAMLCQSETMRWLMAAGQVGWIPAGVAHSAEPLAELYG 74 Query: 87 CFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 + + +A +P + L L+L R + +RL + DEL Q Sbjct: 75 VTAYADSAAYPDLPAEVRVMPAGGLMG-LLLERQLRYEAEPWPGRRQRLAGAIVDELLQL 133 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 LP+ + ++R + + L + A S +L R +ETG+SF Sbjct: 134 VPLPQQLPLPAERRLRALCRRVLADLGRGWLLDELAVAHGFSRASLTRAFARETGVSFGH 193 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 W Q +L+ A++ L G V + A +GY S +AF F++ LG PG Sbjct: 194 WLAQARLLEAVRLLSGGAMVGETALQVGYQSPSAFCAAFRRHLGMAPGE 242 >UniRef50_Q091X7 Helix-turn-helix, AraC type n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q091X7_STIAU Length = 279 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 6/254 (2%) Query: 13 DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72 + AA +FC+ LT+ H HR+ QL+ A GA+ V+ A W++PPQ A W+ G Sbjct: 7 NVDASAASSFCLTDEMPPLTTGWHAHRRHQLLYAARGALHLEVDRAQWLLPPQRAAWLRG 66 Query: 73 GVEHSNQVTANAELCFLFIEPSAVTM--PTTCCTLKISPLCRELILTLANRTTTQRAEP- 129 G H + LC +++EPS V C + PL RE+++ + + Sbjct: 67 GTLHRARANHLVTLCTVYLEPSLVPTAPQEECSVFLLPPLAREMLIYSVRWGPERAPDDT 126 Query: 130 MTRRLIQVLFDELPQQPQ--QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187 + Q L L + Q LP + P++ + + + A +S Sbjct: 127 VAESFFQTLAHLLAEWSSQGQTWRLPRARTPELEKAMAYTLAHLAGPLSFEEAARAAGLS 186 Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKK 246 R LAR +E ++R++ +++ A++ L + G V + A+ +G++S AF F Sbjct: 187 GRTLARRFDEEAQTTWRRFLHDARMLRAMELLAQDGARVTQTAYDVGFESLAAFTHAFHA 246 Query: 247 GLGQTPGRYIARLT 260 G+ P + R+ Sbjct: 247 FSGERPRDFRQRVA 260 >UniRef50_D0LZ72 Transcriptional regulator, AraC family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ72_HALO1 Length = 284 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 109/263 (41%), Gaps = 22/263 (8%) Query: 18 AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77 F + +P H+HR+ Q++ AL G++ V A W++PPQ A +IP G EH Sbjct: 22 PPACFGLADEMGPRHTPWHRHRRHQILYALTGSLKLEVTEAQWLLPPQRAAFIPAGCEHR 81 Query: 78 NQVTANAELCFLFIEPSAVT-------------MPTTCCTLKISPLCRELILTLANRTTT 124 + +A L ++++ + + C ++ L RE++L Sbjct: 82 VRCQRSAALRTVYLDTATFAAGEDAAAPAPVPVIAAGTCVFSVTSLAREMLLYAMRWGPL 141 Query: 125 QRAEPMTRR-LIQVLFDELPQQPQQQ------LHLPVSSHPKIRTMVEMMAKGPVEWGAL 177 + A+ L F L ++ L LP P + E Sbjct: 142 RSADDRASEILADAFFSALALLSREWIRADAGLRLPRPRSPDLSRACEHALADLAAASMA 201 Query: 178 GQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDS 236 +S R LAR ET +S+R + + +++ A++ L + G V +VA ++G+D+ Sbjct: 202 RAAHAAA-VSPRTLARRFRDETQMSWRSFLRTARVLRAMELLAEPGARVTEVALSVGFDN 260 Query: 237 TTAFITMFKKGLGQTPGRYIARL 259 AF T F+ G++P Y R Sbjct: 261 PGAFSTSFRALTGESPSSYQRRF 283 >UniRef50_A8LCQ9 Transcriptional regulator, AraC family n=1 Tax=Frankia sp. EAN1pec RepID=A8LCQ9_FRASN Length = 270 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 11/263 (4%) Query: 9 GYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAV 68 + P R A + DEL S H+H ++ A+ G +++PP YA Sbjct: 2 PFLPMRRCVTVGAGTVEHRADELISYWHRHDLHEVEYAVSGLAEIRTPTTHYLMPPSYAA 61 Query: 69 WIPGGVEHSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRT----- 122 W+P GVEHS + N +F +P+ P + + + P+ RE++ Sbjct: 62 WVPAGVEHS-PLLRNVTTIAVFFDPAVFDFPYSRAAVIPVPPVLREMMRYATRWPIGRGE 120 Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182 A+ R L V+ +L + L LP + P +R ++ E + Sbjct: 121 DDAEADTFFRALAAVVRGQLAH--EAPLSLPTADDPVVRDVMAYTTDHLAE-VTAARVCR 177 Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFI 241 +SER L R G S+R++ +Q++LI A+ L +V ++A +G+ S +A Sbjct: 178 AVGISERVLRRRFAAVLGQSWREYLRQVRLIRAMALLSTPTTSVGEIATEVGFGSASALA 237 Query: 242 TMFKKGLGQTPGRYIARLTTVSP 264 F+ G++P Y R T + Sbjct: 238 RAFRAWTGESPSAYRDRWLTTAA 260 >UniRef50_C2FVA1 AraC family transcriptional regulator n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FVA1_9SPHI Length = 263 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 8/237 (3%) Query: 31 LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS-NQVTANAELCFL 89 L + H H+ QLI +G + E +P +Y WIP G+ + + +L L Sbjct: 23 LNTTFHHHQLNQLISPANGVLYLHTEGDTLYIPDKYYAWIPSGMIYKLISKSEQIKLTTL 82 Query: 90 FIEPS----AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 F++P T + L EL+ + + + L LP Sbjct: 83 FLKPEKNEIQSDFFNTLGVYAPNTLIEELLQFGFRHWQETKHAGLKESCMAALKRILPVV 142 Query: 146 --PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203 +L +P + ++ + K Q A F +SER L+R KETG + Sbjct: 143 LSTPLKLFVPAPESEVLMEIITYIQKHLNSPSDFQQLAQRFNLSERTLSRWFKKETGSTI 202 Query: 204 RQWRQQLQLIMALQGLVKGDT-VQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 Q+ + +++ AL+ + + + ++ H +GY+S +AF T+FK+ +G++P Y R Sbjct: 203 FQFVKSVRVQKALELIESSNMEIVEITHAVGYNSLSAFSTVFKEFMGESPQEYKKRF 259 >UniRef50_B5CUH6 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CUH6_9BACE Length = 268 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 103/243 (42%), Gaps = 12/243 (4%) Query: 26 AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV-TANA 84 G +E+ P H H K Q+I L G + + + + VP ++ WIPG EH Sbjct: 25 TGWEEIKLPGHAHEKCQIIYTLSGTLHVQIGSTSYFVPEKHIAWIPGSTEHELSSKNRQV 84 Query: 85 ELCFLFIEPSAVTMPTTCCTLKI----SPLCRELILTLANRTTTQRAEPMTRRLIQV-LF 139 L ++ A T I S + L + T ++A+ + F Sbjct: 85 SLVIFYLSMDADDKDTALKEFSIYHTNSFIAENLKFIASKGTEIEQADSPDLYTFALSFF 144 Query: 140 DELPQQPQQQLH----LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 LP Q L + + ++ ++ + + E + Q A F S RNL+RL Sbjct: 145 KLLPSISQDMGFLLKMLAIPNDARLHPILAYLQEHLHENLKMPQLAAHFGFSVRNLSRLF 204 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 E+G+ F + L+++ A++ G T+Q++A+ +G+ + F +F++ G +P Sbjct: 205 -NESGIRFSYYVNNLRIMRAIELFADGGRTMQQIAYEVGFATPNHFNRVFRQITGVSPNA 263 Query: 255 YIA 257 ++ Sbjct: 264 FVK 266 >UniRef50_A5EPW3 Transcriptional regulator, AraC family n=3 Tax=Bradyrhizobium RepID=A5EPW3_BRASB Length = 268 Score = 180 bits (458), Expect = 3e-44, Method: Composition-based stats. Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 11/247 (4%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 E V H HR+ QLI A G + T W+VPP AVW+P H Sbjct: 19 EPGVHLIARLYHKGARLDPHMHRESQLIYASRGTMQVTTPQGRWLVPPDRAVWVPARHAH 78 Query: 77 SNQVTANAELCFLFIEPSAVTMP------TTCCTLKISPLCRELILTLANRTTTQRAEPM 130 + + A++++ L+ E + +++SPL + IL L Sbjct: 79 AIDMLADSQMRTLYFELDWLRQAARGLRLDREFVVQVSPLLHQAILALFAPDGG---AER 135 Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190 L+++ EL + +P+ P+ R ++ P L A S R Sbjct: 136 AALLVRLALLELRRAEDSSTFIPLPQDPRARRAALLVLASPATEEDLATLASMVGSSART 195 Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLV--KGDTVQKVAHTLGYDSTTAFITMFKKGL 248 L+RL ET LSF+ W Q+ ++ A++ L + +V+++A LGY S AF F++ Sbjct: 196 LSRLFAAETRLSFKAWCQRARIAAAIERLSTDRHLSVKQLAADLGYASVPAFSHAFRQVT 255 Query: 249 GQTPGRY 255 G+TP + Sbjct: 256 GRTPTDF 262 >UniRef50_C7PA31 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PA31_CHIPD Length = 264 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 11/264 (4%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 MH L E D H ++ + +H + S +H H KGQL G C + + ++ Sbjct: 1 MHLLADYLNEIDVHPDSV--YVMHEKVERKFS-MHSHIKGQLTYVEGGIAFCNMPDKSYV 57 Query: 62 VPPQYAVWIPGGVEHSNQVTAN--AELCFLFI---EPSAVTMPTTCCTLKISPLCRELIL 116 +P ++ +WIP EH Q+ + L+ + ++ L E+I Sbjct: 58 IPARHYIWIPKQQEHYMQIRHSKSTTTRNLYFYSQDDHLTPFYNKLGIYPVNDLLLEMIN 117 Query: 117 TLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL--HLPVSSHPKIRTMVEMMAKGPVEW 174 A R + + D LP L LP + H ++R +++ +A+ + Sbjct: 118 YSARWERHVLPGDPGFRFLSSIKDILPDISTSALPVALPTTQHERLRPVLQYIAQSFDQQ 177 Query: 175 GALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLG 233 L + F +S R L+RL +SF Q+ Q L+++ ++ +++ T+ ++A+ G Sbjct: 178 LTLESVSSQFDLSPRTLSRLFTNILDMSFVQYLQTLRVVRGIEMILQTNQTLSEIAYQTG 237 Query: 234 YDSTTAFITMFKKGLGQTPGRYIA 257 Y S AF +F + + P + Sbjct: 238 YSSIAAFSKVFYQLTNKRPSSFQQ 261 >UniRef50_UPI000197B237 hypothetical protein BACCOPRO_02201 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197B237 Length = 274 Score = 179 bits (455), Expect = 6e-44, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 112/249 (44%), Gaps = 12/249 (4%) Query: 20 VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS-N 78 V G E+ P H H K Q+I L G + + + + VP ++ WIP G EH + Sbjct: 19 VILIKKTGWKEVNLPGHVHGKCQIIYTLAGTLHVEIGSESYFVPEKHIAWIPQGAEHKLS 78 Query: 79 QVTANAELCFLFI--EPSAVTMPT-TCCTLKISPLCRELILTLANRT--TTQRAEPMTRR 133 + + ++ P P + L E + +A++ ++ +P Sbjct: 79 SNSRQVSMVIFYVSLRPEGKDDPKGEFAIYTANRLIGENLKFIASKGKMIEKQEQPDLYH 138 Query: 134 LIQVLFDELPQQPQQQL----HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 F+ LPQ + L + ++ ++ + E + + A + +S R Sbjct: 139 FALGFFNLLPQMSPGKELLLKSLVIPDDSRLYPILRYLTDHVQEELRMDEVALRYNLSTR 198 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGL 248 NL+RL +E+ + F + +L+++ A++ + G T+Q++A+ +G++++ F +F++ Sbjct: 199 NLSRLF-QESNIHFSSYVNRLRIMRAIELMTDGGRTMQEIAYAVGFNNSNHFNRVFRQVT 257 Query: 249 GQTPGRYIA 257 GQ+P Y+ Sbjct: 258 GQSPKNYLR 266 >UniRef50_Q2S7S2 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7S2_HAHCH Length = 250 Score = 179 bits (455), Expect = 7e-44, Method: Composition-based stats. Identities = 62/240 (25%), Positives = 98/240 (40%), Gaps = 2/240 (0%) Query: 21 AFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV 80 + G D+ + +H +GQL GAI C + W+ P+ WIP G +H + Sbjct: 9 VLRLDIGADQ-SRDLHARSEGQLYWLEQGAIFCRSDRFHWLTAPRQLTWIPPGCQHDARP 67 Query: 81 TANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLF 139 + L + +P L+ L +L L L+QV Sbjct: 68 LSTVRGVLLHLREDLTFVLPKEPVALEPHRLLEATLLRLIELCPESDWLERHEHLLQVFL 127 Query: 140 DELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKET 199 E + + LP+ P++ M + + P L A + S R L R ++ET Sbjct: 128 WEAREATPLRQRLPMPHDPRLLRMANSLWRAPESNPGLDALALEYGFSRRTLTRKFMQET 187 Query: 200 GLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 G S QW Q +L+ AL+ L ++V A +GY S + F +FK+ G +PG Y R Sbjct: 188 GASLSQWTQHAKLLRALELLAANESVSSAAFGVGYQSVSTFCAVFKQVFGMSPGDYKRRF 247 >UniRef50_D1BFL9 DNA-binding domain-containing protein, AraC-type n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BFL9_SANKS Length = 280 Score = 179 bits (455), Expect = 8e-44, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 113/251 (45%), Gaps = 8/251 (3%) Query: 21 AFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV 80 G + H H L G + +++A+W + P +W+P G H+++ Sbjct: 29 VVVADQGVSRPLAAPHSHPDAMLAWCYRGTVWVYLQDAVWRLAPGQGIWVPAGTPHTSRH 88 Query: 81 TANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLF 139 + C+ ++ +A+ P T + ++ +E++L L + + R+ V+ Sbjct: 89 EPGSTGCYTYLPDAALVAPVATITRVLVARAVQEMLLHLG---ADDMDDGLRVRIQAVIL 145 Query: 140 DELPQQPQQ----QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 + L Q Q +P+ + ++R +V+ + P + + + ER + R++ Sbjct: 146 EMLQQPSLQASDGWGEVPLPADERLRPLVQAVLADPGDPRTARELFDAHGLHERTVLRVL 205 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 ++ G++F +WR +++ A + LV G V VAH GY +T+AF FK+ G TP + Sbjct: 206 QRDVGMTFARWRAGVRMTQAARMLVDGTPVGLVAHRTGYGTTSAFSAAFKQRFGMTPREH 265 Query: 256 IARLTTVSPQS 266 +AR+ Sbjct: 266 VARVRANPAHH 276 >UniRef50_B7H290 Bacterial regulatory helix-turn-helix protein, AraC family protein n=15 Tax=Acinetobacter RepID=B7H290_ACIB3 Length = 254 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 113/229 (49%), Gaps = 2/229 (0%) Query: 30 ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH-SNQVTANAELCF 88 E H G +L+G + VE +++ PP Y +WIP H S + Sbjct: 24 EDIVRPHASLWGDFNFSLNGILEIQVEEQIYLSPPSYGLWIPPQTVHQSTHIDHEIHYIC 83 Query: 89 LFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147 + + P + + C I P R L+L + + L+QVLFD+L Q P Sbjct: 84 IRLHPRLCSILGDICRCFSIQPFFRTLVLQILEQQKQTEKPEYLEHLLQVLFDQLQQAPA 143 Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207 +LP + HP + ++E ++ + +L Q F++S+R+L RL +E LS +WR Sbjct: 144 YSHYLPQTRHPVLLPILEKLSDPLLFNLSLQQLLQNFSVSDRHLLRLSQQELQLSLSEWR 203 Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 + +++ A+ + +G +++++A+ LGY +++FI FK+ GQTP + Sbjct: 204 NRAKIVYAIHQIRQGTSIKRLAYDLGYQHSSSFIEFFKRYTGQTPVQIR 252 >UniRef50_A6GAR4 Putative transcriptional regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GAR4_9DELT Length = 262 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 65/246 (26%), Positives = 98/246 (39%), Gaps = 5/246 (2%) Query: 13 DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72 D A+ F I S H HR+ QL+ A+ G + + W++P A WIP Sbjct: 10 DVDRARALGFGIDETYRGFVSDWHSHRRHQLLHAVEGNLELEDSHGRWLLPEAQAAWIPA 69 Query: 73 GVEHSNQVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131 G H A L L++ PS V P ++ L L+ +R + Sbjct: 70 GQRHRVSSAG-ARLQTLYLAPSLVAQPPAETAVFQLPALGHALLARALGWPHHRRLDRRA 128 Query: 132 RRLIQVLFDELPQQ--PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 R L + +E LP + + + + L + A +S R Sbjct: 129 RALFVCVAEEFAAWSLEPGPWRLPQPRSQALAAAMRHVVDNLEDGPTLAEAARQAGVSAR 188 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGL 248 +L R ETG SFR++ ++I A + L + G V VA+ LGY S +AF T F + Sbjct: 189 SLERRFRAETGSSFREFLLTARMIEAQRLLREPGARVSSVAYRLGYSSPSAFSTAFLARV 248 Query: 249 GQTPGR 254 GQ P Sbjct: 249 GQRPKA 254 >UniRef50_C5PU57 AraC family transcriptional regulator n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=C5PU57_9SPHI Length = 271 Score = 176 bits (446), Expect = 8e-43, Method: Composition-based stats. Identities = 55/237 (23%), Positives = 100/237 (42%), Gaps = 8/237 (3%) Query: 31 LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS-NQVTANAELCFL 89 L + H H+ QLI +G + E +P +Y WIP G + + +L L Sbjct: 28 LNTSFHHHQLDQLISPENGVLYLHTEGDTLYIPDKYYAWIPSGTIYKLISKSEQIKLRTL 87 Query: 90 FIEPSAVTMPTTC----CTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ- 144 F+EP + L EL+ + +R + I + LP Sbjct: 88 FLEPEKNEFHADFFNSLAVYAPNTLIEELLQFGFSHWKKERDPELKEYCIAAIRHILPVA 147 Query: 145 -QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203 +L +P + ++ + + + A F +SER L+R KETG + Sbjct: 148 LSTPLKLFVPAPASEVLQESITYIQNHIKGPLDIQHLAQKFHLSERTLSRWFKKETGSTL 207 Query: 204 RQWRQQLQLIMALQGLVKGDT-VQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 Q+ + +++ AL+ + + ++ H +GY+S +AF T+FK+ +G++P Y R Sbjct: 208 FQFVKSVRVQKALELIENSRMDIIEIMHAVGYNSLSAFSTVFKELIGESPQEYKKRF 264 >UniRef50_Q28SV1 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28SV1_JANSC Length = 252 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 95/223 (42%), Gaps = 4/223 (1%) Query: 39 RKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT- 97 + L+ A+ GA+ +V W++PP +A W+P S + C + P T Sbjct: 26 DRDYLLYAIRGALRVSVAGESWLLPPSFAAWLPANTPISVDIDKPVTTCSVLARPGLCTG 85 Query: 98 MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL--PVS 155 +P C ++SP+ R++I + L + + + P + Sbjct: 86 LPEKACVFQMSPMARQMIHYCKDWGPDAAHPAQAEGFFLALLHVCADLAVKSVDVKRPTA 145 Query: 156 SHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMA 215 + P +R +++ + + A +SER++ R + G+++ Q QL++I A Sbjct: 146 TDPVLRKAIDITEAHLAQAITANEIARKVNLSERSMQRHFQMDVGMTWSQTLTQLRMIHA 205 Query: 216 LQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 + L +G ++ ++A G+ S +AF F+ TP ++ Sbjct: 206 VALLAEGKLSIIQIAGYTGFQSLSAFNRAFRTFAATTPTKFRK 248 >UniRef50_D0KLM1 Transcriptional regulator, AraC family n=2 Tax=Enterobacteriaceae RepID=D0KLM1_PECWW Length = 218 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 2/206 (0%) Query: 30 ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89 + ++P H+H GQL G I A W V P W P + H V N L Sbjct: 11 QHSTPWHKHSSGQLYWLREGIIVIETVLAQWTVTPGSVGWFPPDLNHRAWVPGNVIGNSL 70 Query: 90 FIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQ 148 +++P S+ P L+ N + + +E + +L E+ Q + Sbjct: 71 YLDPVSSNHFPYHAGIYGADHFIIALLER-CNNSHIKHSEEYENLISNLLGYEIRQCSEL 129 Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208 L L + + + R + + K P Q A + +S RNL+RL ++TGLSF QWRQ Sbjct: 130 PLELKLPTDRRARNVASELLKNPGCILDQSQLAQKWGLSVRNLSRLFNQQTGLSFSQWRQ 189 Query: 209 QLQLIMALQGLVKGDTVQKVAHTLGY 234 Q +++ +LQ ++ G V +VA GY Sbjct: 190 QAKVVASLQWVLLGLPVNEVASLSGY 215 >UniRef50_A6ED21 Transcriptional regulator, AraC family protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6ED21_9SPHI Length = 271 Score = 174 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 10/253 (3%) Query: 10 YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69 + D H E + H+ ++ H H+KGQL G I + +P ++ VW Sbjct: 11 FNLDEHTE--TTYVWHSKFEDRFKD-HHHKKGQLTYVEGGVIFLYTREQSYFIPARHYVW 67 Query: 70 IPGGVEHSNQVT-ANAELCFLFIEPSAV---TMPTTCCTLKISPLCRELILTLANRTTTQ 125 +P GV H + + + ++ + ++ L E++ N Sbjct: 68 VPAGVTHHLEHRYRSTIVRNVYFNAKNEIDHSFFDHIGIYPVNDLLLEMLKFSENWNGNI 127 Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHL--PVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183 ++ L LP + L + P + + ++R ++ + + E L + A Sbjct: 128 YPGSFEYGFLETLKSILPAISKHPLPIVVPTTDNERLRPVLWYIRQHLSEELTLEKIALE 187 Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFIT 242 SER L+RL SF Q+ + +++ A++ L++ D TV ++A+ +GYDS AF Sbjct: 188 TGFSERTLSRLFQASLKTSFFQYLKLVRMTRAMEKLLETDRTVTEIAYEVGYDSIAAFSN 247 Query: 243 MFKKGLGQTPGRY 255 F K GQ P + Sbjct: 248 TFYKMTGQRPSAF 260 >UniRef50_C7PGY2 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PGY2_CHIPD Length = 278 Score = 173 bits (439), Expect = 5e-42, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 103/251 (41%), Gaps = 8/251 (3%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 P+ +A F IH ++ P+HQH K QL G + + L ++P ++ WIP Sbjct: 22 PEIEQQATSIFVIHEKCEKQI-PLHQHSKSQLFYVDGGIAYIRLADQLLVIPSRHYCWIP 80 Query: 72 GGVEHSNQVTAN-AELCFLFIE---PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRA 127 G+ HS + N L + + I+ L E++ Sbjct: 81 AGIPHSLTIGQNGTHLRSILFTTKGENKHAFYNDVGIYPINDLLIEMMRYTEQWQGHILP 140 Query: 128 EPMTRRLIQVLFDELPQQPQQQL--HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185 + +Q + LP+ + L LP + + ++ ++ + + + L + F Sbjct: 141 DDERFMFLQSIKSILPKISIRHLPIALPYTENKRMLQIISYIEENISDKHTLETISKRFG 200 Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMF 244 +S+R L+R +SF Q+ + L+++ A + + + ++ ++A+ GY S +F F Sbjct: 201 LSDRTLSRFFKDTLKISFLQYLKLLRMVKAFELIQQKAHSLSEIAYLTGYQSLASFSYTF 260 Query: 245 KKGLGQTPGRY 255 + P + Sbjct: 261 YQVTNMRPSEF 271 >UniRef50_D1WSG5 Transcriptional regulator, AraC family n=3 Tax=Streptomyces RepID=D1WSG5_9ACTO Length = 265 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 8/232 (3%) Query: 34 PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93 P H H Q + G I T + P A+WIP GV HS + ++ + EP Sbjct: 40 PTHVHVFHQFLYVPLGRIVVTALGRDHELSPSVALWIPAGVPHSARFDPDSLVVAETFEP 99 Query: 94 SAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152 +P T ++ +S R+L+L+ + +P +F L + L L Sbjct: 100 DRHRLPYTEITSVNVSDAQRQLLLSRMRSSEVTEEDP-------AVFAVLCSGHRDVLPL 152 Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212 P + T+ + + P + +WA S +L R ETGL+F +WR +L+L Sbjct: 153 PRPTGRAAATVAGELMRNPGDPRTASEWAEGLYTSSTSLRRAFRAETGLAFSEWRTRLRL 212 Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSP 264 +L L G V VA +G+ ST +I F++ G+TPG Y+ R + + Sbjct: 213 NHSLHLLAAGHMVSTVAARVGFVSTNGYILAFRRYFGETPGAYVKRSASRTA 264 >UniRef50_B5H317 AraC-type DNA-binding domain-containing protein n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5H317_STRCL Length = 253 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 104/256 (40%), Gaps = 32/256 (12%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN--------- 78 + + P +H + L G + W++PP A+WIP GV H+ Sbjct: 2 PEGVWQPTRRHPRHLLARVPGGLLAVRTGAGAWLLPPSTALWIPAGVPHATAVLTTPAAP 61 Query: 79 ---------------QVTANAELCFLFIEPSAVTMP---TTCCTLKISPLCRELILTLAN 120 +++ L +P T P +++ PL LI L Sbjct: 62 SAPAAPPAPTAVAAARISGPV--VDLAADPLTTTGPGTWRDPTAVRVEPLLSALIDHLGR 119 Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180 T A RR +V+ D L P + P+ R + +A P + L W Sbjct: 120 PGLTPDA---RRRAEEVVLDVLVPLPVISVAAAEPQDPRARAVARALAGDPRDNRGLPAW 176 Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240 S R LARL + ETGL+F QWR++L++ A+ L ++ VA +GY S ++F Sbjct: 177 GSQVGASARTLARLFIAETGLTFGQWRERLRMQAAMPLLASELPIEAVARRVGYGSASSF 236 Query: 241 ITMFKKGLGQTPGRYI 256 + F + +G TP +Y Sbjct: 237 VAAFHRIVGLTPRQYF 252 >UniRef50_A3XQJ9 Probable transcription regulator protein n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XQJ9_9FLAO Length = 261 Score = 170 bits (430), Expect = 5e-41, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 110/251 (43%), Gaps = 9/251 (3%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 H + H+ +E P+H H+K Q+ G +N + P ++ +WIP G+E Sbjct: 10 HYPDSIYVHHSKIEE-QLPMHSHKKHQISYVEGGVAFLNTKNNSFFFPARHFIWIPAGLE 68 Query: 76 HSNQVTANAELCF-LFIEPSAVTMPT---TCCTLKISPLCRELILTLANRTTT-QRAEPM 130 H+ + ++ LF + +S L E+I R + Sbjct: 69 HNVTSRTSVKMVHNLFFPADLIPETEILKKAGIFPVSNLLMEMINYTQRWNGDILRTDAE 128 Query: 131 TRRLIQVLFDEL--PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSE 188 + L + + + + LP +++ +R +++ + + L + A F S Sbjct: 129 AFEFLIALRNIILEVAKTPFPVVLPTTTNEMLRPILKYIHLNVDQPLYLEEVAAHFGYSA 188 Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKG 247 R+L+RL K SF Q+ + ++I +++ L+K D ++ +VA+ GY+S +AF F + Sbjct: 189 RSLSRLFQKNIETSFLQYVKLTRIIKSIELLLKTDLSISEVAYASGYNSLSAFSYAFNQI 248 Query: 248 LGQTPGRYIAR 258 + Q+P + + Sbjct: 249 VNQSPAAFKKQ 259 >UniRef50_D1BHB2 Transcriptional regulator, AraC family n=10 Tax=Actinomycetales RepID=D1BHB2_SANKS Length = 279 Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats. Identities = 60/231 (25%), Positives = 95/231 (41%), Gaps = 4/231 (1%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 T + H H +L+ GA T TV W V P +W+P GV HS A Sbjct: 53 THDTWWEEHSHPTHELLWNERGASTATVGPRTWTVTPSIGLWVPAGVRHSGWTPAGTWQR 112 Query: 88 FLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147 + V + + +LTL +R + + ++ Sbjct: 113 AAQLNTRTVRSISETPV----AVDLTPLLTLLLDRLDSDLGEASRATTEAMVLDVLVPAP 168 Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207 +L L + + +VE + P + L WA +S R + R + ETGL F QW Sbjct: 169 TELLLQSPTSELLAPVVETVLADPADPTTLAAWAARLGVSTRTVTRTFLAETGLGFSQWV 228 Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 + A+ L +G+ ++ VA +GY S +AF T F++ G +PGR+ AR Sbjct: 229 ATARTQHAIALLARGEEIEDVALLVGYGSASAFGTAFRRVTGVSPGRFRAR 279 >UniRef50_A9GKK5 Transcriptional regulator, AraC family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GKK5_SORC5 Length = 304 Score = 169 bits (428), Expect = 9e-41, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 104/259 (40%), Gaps = 8/259 (3%) Query: 15 HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGV 74 H A AF H H + QL+ L G VE+A +++PPQ A IP G Sbjct: 47 DHAGARAFSYEDELRGAVYGWHTHARHQLLCPLAGTARLEVEDASFLLPPQLAALIPAGE 106 Query: 75 EHSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRR 133 H+ +A + ++ EP+A P +I L RE+++ +R + Sbjct: 107 RHATTC-GDASIVSIYFEPAAFPSPLAAVRIFEIPALLREMVIYARRWPVARRPDDAAAN 165 Query: 134 LIQVLFDELP---QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190 ++ LP ++ +E + L + A F +ER Sbjct: 166 TFFAAMADIIGPLLDRGATYRLPRGKTRPVQRAIECALRDVAS-ADLPRAAAFAGATERT 224 Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLV-KGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 L R +ETG+++R + + +++ A+ L +V +VA +G+ S AF F+ G Sbjct: 225 LRRRFREETGVTWRGFVTRARVLRAIDLLSGPSASVTQVALDVGFQSLGAFAAAFRAVTG 284 Query: 250 QTPGRYIARLTTVSPQSAK 268 QTP + R SP Sbjct: 285 QTPSEFR-RTARPSPGGGH 302 >UniRef50_C6C927 Transcriptional regulator, AraC family n=2 Tax=Dickeya dadantii RepID=C6C927_DICDC Length = 271 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 63/235 (26%), Positives = 101/235 (42%), Gaps = 6/235 (2%) Query: 31 LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLF 90 +P H+H +GQ +L G + + W++ A+WIP H + EL ++ Sbjct: 24 HENPPHRHPQGQFVLVRQGLLQGFSSQSSWLLKAGMAIWIPPETVHWGETAHQVELLVVY 83 Query: 91 IEPSAVTMPTTCCTLKISPLCRELILTLANR---TTTQRAEPMTRRLIQVLFDELPQQPQ 147 P T L LI+ L R + + RL+Q+LF+E+ P Sbjct: 84 ATPEQCQAITCPLKLM---NASCLIIGLCERLAAPNSALPDTRRERLLQLLFEEIADSPS 140 Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207 L LP+ P+++ + + + P L W + R L+RL +++TGLSF W Sbjct: 141 SPLSLPLPDDPRLKKITDALIATPSLRHNLDSWGKHAGATARTLSRLFMRQTGLSFGAWH 200 Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262 +L L A + L G +A LG+ AF FK+ G TPG+ + T Sbjct: 201 DRLLLSEAWRQLHAGYNNDALALHLGFSCGDAFGHWFKRIAGLTPGQARRQCQTA 255 >UniRef50_C7R5F1 Transcriptional regulator, AraC family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R5F1_JONDD Length = 267 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 5/220 (2%) Query: 41 GQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS---AVT 97 L HG + + ++V +W+P V H+ + + +A L + ++ Sbjct: 45 HMLAWVPHGTLRVDIAGRTYLVTHTRLLWVPANVTHTLRPSHDALLIPFMMPTDPDTTIS 104 Query: 98 MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSH 157 TT T++ + LI LA + E R + L D LP+ + + + + Sbjct: 105 TWTTVHTIRATGALHSLIRVLAQPALSTAHE--YSRALDQLLDVLPRLKELDIDVALPCD 162 Query: 158 PKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQ 217 P+ T+ + + P +L +WA S + L RL V++TG++F +WR ++++ AL Sbjct: 163 PRAATVATALIENPAHPRSLEEWAKVCYTSAKTLQRLFVQQTGVTFPEWRTRVRVRTALD 222 Query: 218 GLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 L +G TV VA +GY + + FI F + G TP RY+ Sbjct: 223 LLHEGWTVHSVATRVGYSTASGFIAAFSRITGHTPARYMR 262 >UniRef50_C5PVX4 AraC family transcriptional regulator n=2 Tax=Sphingobacterium spiritivorum RepID=C5PVX4_9SPHI Length = 258 Score = 167 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 48/227 (21%), Positives = 93/227 (40%), Gaps = 5/227 (2%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV-TANAELCFLFIE- 92 VH HR Q + G + ++P +A WIP + H ++ +L +F Sbjct: 31 VHGHRLAQFVYVEKGFQYLEAGGKIHLLPQNHAAWIPPNMLHKTSTDASHVQLRTIFYRM 90 Query: 93 PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELP--QQPQQQL 150 +++P+ +E+IL ++ + ELP + L Sbjct: 91 EDIPEFYNELRIFQVAPVLKEMILYAEKWNRIADYSIEEDTFLKAIVLELPNFWKHSLSL 150 Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210 H+P + + + + + + A +S R+L R+ ETG++ ++ Q + Sbjct: 151 HIPAPMDEHLIKVCAYIHSHLADNRPVAEIAEQHYLSLRSLQRIFKSETGITLAKYMQMV 210 Query: 211 QLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 ++I +++ L G TV +VAH +GY S AF F + P ++ Sbjct: 211 RIIKSVELLGTGRYTVSQVAHLVGYKSVQAFSDSFYMIIKDRPHTFL 257 >UniRef50_C0YKT6 AraC family transcriptional regulator n=3 Tax=Bacteroidetes RepID=C0YKT6_9FLAO Length = 267 Score = 162 bits (411), Expect = 9e-39, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 91/223 (40%), Gaps = 5/223 (2%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANA--ELCFLFIEP 93 H+H + QL G ++ +++VP + +WIP +H A + FLF Sbjct: 36 HRHSRAQLTFVEEGYQYFHIDRKIYLVPQHHVIWIPSEKDHKITSEAQTVNLMVFLFKSV 95 Query: 94 SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ--PQQQLH 151 P+ +E++L + + + LP L Sbjct: 96 FEDEFYKNVQVFAAPPVLKEMLLYASKWNQLLDENEEQDVFFKAILKSLPNFCKESSSLE 155 Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211 +PV + ++ + + + A MS R+L R+ ETG++ +++ Q + Sbjct: 156 IPVPADTRLIPVCNEINTHFKYNLDIDSLAEKAQMSVRSLQRIFKNETGITLQKYLQLTR 215 Query: 212 LIMALQGL-VKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253 ++ +++ + + T+ +VA+ +GY S +AF + + + + P Sbjct: 216 ILKSIELIDTRQYTLSEVAYKVGYQSLSAFTSSYFTIMQEKPK 258 >UniRef50_Q1QZK4 Transcriptional regulator, AraC family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZK4_CHRSD Length = 266 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 117/267 (43%), Gaps = 7/267 (2%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 M + + + D ++A+A + + +H H Q+ + T + + + Sbjct: 1 MTAQNGQDVWHEDILDDSAIAVLSYPIGEMQRDQLHSHGYHQIAMCEQPGATLLLGSQVV 60 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120 +P A+ +P G +H+ + ++ + + + T+ +L ++ L +ELI ++ Sbjct: 61 SIPWNGALLVPSGTDHALTSETRCVIRCIYFKAALPS--TSIGSLFLNRLTKELIKEIST 118 Query: 121 RTTTQRAEPMTRRLIQV-LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 T +RRL++ L+D++ Q + +R + + + P + + Sbjct: 119 SYVT----ERSRRLMEACLYDQIGQLLWSSGSGMMPPSRSLRVICKHIFDTPEDDTPVAT 174 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 A +SER+L RL E G + Q R + ++ A Q L G V+ +A +GY S +A Sbjct: 175 LAKDAGLSERSLRRLARDELGCTISQIRTRCRIYKATQLLQAGVPVKLIAADVGYQSNSA 234 Query: 240 FITMFKKGLGQTPGRYIARLTTVSPQS 266 F + F++ +G +P R+ A S Sbjct: 235 FFSAFREIMGMSPARFQAECAASRSLS 261 >UniRef50_B3JKA4 Putative uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JKA4_9BACE Length = 267 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 98/243 (40%), Gaps = 13/243 (5%) Query: 26 AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS-NQVTANA 84 G + + H H K Q+I L G + + VP ++ WIP H + + Sbjct: 25 TGWEAINFQEHAHEKFQIIYTLSGTLHVETGGVNYFVPEKHIAWIPEKASHKLSSNSRQV 84 Query: 85 ELCFLFIEPSAVTMP--TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDEL 142 L +I + + + E + +A++ L Sbjct: 85 SLIIFYINLNITPDDGKNRFSIYSTNGIIAENLKFIASKGKV-ITRGKQTDLYNFALSFF 143 Query: 143 PQQPQQQLH-------LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 PQ L L + + ++ ++ + + E + Q A + +S RNL+RL Sbjct: 144 NLLPQMTLGADFLLKTLVIPNDSRLHPILNYITEHIHEDLNMEQIASQYNLSVRNLSRLF 203 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 +G+ F + L++ A++ L GD TVQ+VA+ +G+++ F +FK+ G++P Sbjct: 204 -NTSGIHFSNYVNHLRITRAIELLTDGDNTVQEVAYKVGFNTPNNFNRVFKQVTGKSPKT 262 Query: 255 YIA 257 YI Sbjct: 263 YIK 265 >UniRef50_A5KTY3 Transcriptional regulator, araC family protein n=5 Tax=Vibrionales RepID=A5KTY3_9GAMM Length = 262 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 53/222 (23%), Positives = 93/222 (41%), Gaps = 5/222 (2%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 +S VH H L+ G + + + P ++IP GV H +++ Sbjct: 37 ESHYSSEVHSHDYSHLVFIHQGCQIISTDKDSLLSMPGSLIYIPAGVPHRADALKQSQVS 96 Query: 88 FLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ-- 145 L + ++ T C L ISP+ +L N Q+ EP IQVL D+ + Sbjct: 97 LLRLPLGSIPELTEICILDISPIVTQLFSLWKNGGPEQKLEP---HYIQVLMDQCTRCKA 153 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 L ++ +++ ++ P ++ + S R L RL + SFR+ Sbjct: 154 VDNPLIAKEGMDRRLLPVIDALSNKPSIKLSISDLSKQTGASVRTLNRLFLTSFKASFRE 213 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247 RQ++ + A + + KG + ++A L Y S +AF T FK+ Sbjct: 214 VRQKVVMERAEKMMAKGISATEIAFELEYSSLSAFSTAFKEH 255 >UniRef50_Q5WI14 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WI14_BACSK Length = 275 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 109/252 (43%), Gaps = 16/252 (6%) Query: 22 FCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT 81 F A T E P+H H +LI ++G++ E + + + ++I V HS Q Sbjct: 19 FIFQARTTERVIPMHFHSNMELIYCINGSLRVWHEGKVTTLMDKDMLFINSNVPHSTQSL 78 Query: 82 ANAELCFLFI-------EPSAVTMPTTCCTL--KISPLCRELILT---LANRTTTQRAEP 129 + L+ E + + T+ L ++ R L++ L T T Sbjct: 79 TENRVLVLYFPKSFFASEQVLIQLNTSEEQLDEQVLSNLRTLLMEIYNLHYSTGTYDYIL 138 Query: 130 MTRRLIQVLFDELPQQPQQQLHLP---VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAM 186 R+I++ + Q P S KI+T+++ + + E +L + A Sbjct: 139 AQSRIIELKYWLARHFSQTAELSPATSRSDRQKIQTILDFIKEHYTENISLAETARICGY 198 Query: 187 SERNLARLIVKETGLSFRQWRQQLQLIMALQGL-VKGDTVQKVAHTLGYDSTTAFITMFK 245 SE L+R+ + TG +F +++Q L L A+ L ++ ++++ G+ + +F +FK Sbjct: 199 SEAYLSRMFHEYTGQTFTEYKQILCLEKAIDLLDTTNKSLTEISYETGFPNVKSFRKVFK 258 Query: 246 KGLGQTPGRYIA 257 + +G+TP Y Sbjct: 259 EVMGKTPYEYKK 270 >UniRef50_Q1LNA3 Transcriptional regulator, AraC family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LNA3_RALME Length = 197 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 1/186 (0%) Query: 74 VEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTR 132 + HS +V + P ++ +P + S L ++ L + ++ Sbjct: 1 MTHSARVHGTMSGWVGHLAPELSLDLPGRPTAFRQSALSAAILERLPGSGVSSASDKREL 60 Query: 133 RLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192 RL++ L DEL P Q + LP ++ + + +L A MS R+L Sbjct: 61 RLLEALVDELGLLPPQPMCLPYPKTSRLADIARKIIDDLAVANSLDDMAALAFMSRRSLT 120 Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252 R ETG+S +WR ++ A+Q L G +V +A+TLGYD + FI F G TP Sbjct: 121 RQFRAETGMSIVEWRDAARMQRAVQLLAAGHSVTSIAYTLGYDGASRFIDKFSATFGVTP 180 Query: 253 GRYIAR 258 ++ R Sbjct: 181 KQFSLR 186 >UniRef50_C3JMH4 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus erythropolis RepID=C3JMH4_RHOER Length = 538 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 16/240 (6%) Query: 43 LILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS--AVTMPT 100 L L G+ + ++ VP +WIP GV +S + +++ + + PS P Sbjct: 31 LFWVLAGSGRVRTGSTVYEVPAGELLWIPAGVRYSMETDSDSVAFPILLPPSNGVSAGPA 90 Query: 101 TCCTLKISP-----LCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP-V 154 T L++ P L E + L LF+ + + LP + Sbjct: 91 TVTRLRVPPGWEDRLIHEFVHNLGYLRGDAAHPSS-------LFEMITRADDGATSLPQL 143 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 + + + + P Q+A +S R L R V+ETGL+F +WR + ++ Sbjct: 144 PQSREAFEIAHALLRTPGTDDTEAQFAKRAGISIRTLQRYFVEETGLTFTRWRLRARIAA 203 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR-LTTVSPQSAKPDPRQ 273 +L+ L + + +A+ +G+++ + F F+ +G++P Y R L+ + +S D Q Sbjct: 204 SLEYLKQDREIGWIANEVGFETGSGFTRAFRAQMGESPSDYRRRALSGPTDRSVDTDNDQ 263 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 54/239 (22%), Positives = 86/239 (35%), Gaps = 13/239 (5%) Query: 44 ILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTM--PTT 101 + G V + W + A+ +P GV ++ V + L L S + Sbjct: 298 VWVYRGQARVDVADRSWELRTGEAMILPAGVLNTVTVPTGSLLLPLGFRSSNGSTVSADA 357 Query: 102 CCTLKISPLCR-ELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP-QQQLHLPVSSHPK 159 T++ SP L+ T T R FD + P Q + + Sbjct: 358 LETVQFSPADELALLHTFVAAYTPLRPRGHDSATA---FDIIATGPLAQPVSNTSPADSI 414 Query: 160 IRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGL 219 + +A P + L +WA F L R ETG ++ QWR ++ A L Sbjct: 415 ATRLAATIAARPADPRTLDEWAQEFGTDAARLRREFRIETGTTYPQWRSLSRMTQARTQL 474 Query: 220 VKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVS------PQSAKPDPR 272 G V+ LGY AF F+ G +P R+ A+ + P++A+P R Sbjct: 475 QLGVAPGTVSRNLGYAHLPAFSRAFRTAHGISPQRFQAQSVERALWLRSVPRAAEPSAR 533 >UniRef50_UPI000197B111 hypothetical protein BACCOPRO_01534 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197B111 Length = 267 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 92/237 (38%), Gaps = 7/237 (2%) Query: 26 AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN-QVTANA 84 G +E+ +H H + Q+I L G + VE V + VWIP G+ H Sbjct: 30 TGREEVDLYLHMHNRHQIIYILSGTLHIEVEGVNHFVTDHHLVWIPAGLSHRLPSNNRQI 89 Query: 85 ELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ 144 L + V L R L + +R +P LP Sbjct: 90 SLLTSYFYAEKVRNDRFAAYQTDEMLARNLKFISQQGSVIRREKPEIFTFSMSFLCMLPL 149 Query: 145 QPQQQLHLPVS----SHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETG 200 ++ ++ ++E + + ++ A F S RNL RL +G Sbjct: 150 VCRKASFPTQPFIIAHDNRLLPVLEYIKANLGKDLSIENVASHFGFSVRNLTRLFTN-SG 208 Query: 201 LSFRQWRQQLQLIMALQGLVKG-DTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 + F + +++ A++ L +++ A+ +G++S +F +F++ G++P +YI Sbjct: 209 IRFVHYLNYQRVVRAIEILTDNVMNIEQTAYEVGFNSPNSFSRVFRQITGESPSKYI 265 >UniRef50_A0KFD0 Transcriptional regulator, AraC family n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KFD0_AERHH Length = 230 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 7/231 (3%) Query: 24 IHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTAN 83 + +H H Q G + + A ++ IP G+ H +V + Sbjct: 5 YRDYPQGALTALHCHGGSQFCYLHRGGGVISSQAAGVLLVAGQLCLIPAGLAHEFRVLRH 64 Query: 84 AELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELP 143 + L ++++ + + T ++SPL L LA + + VL EL Sbjct: 65 SRLSLIYLDD--LDGGSELTTRQVSPLLAGLFERLA----DMAEPGLRDAYLTVLAAELR 118 Query: 144 QQPQQQ-LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202 Q P L + ++ ++E + + P L + A S R L RL ++ G S Sbjct: 119 QAPVAAGFMLSAALDVRLLRVLERVCRHPSIEYGLAELAADSGASVRTLNRLFSQQLGCS 178 Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253 FRQWRQQ+ + A Q +G + ++A LGY +AF F + L + G Sbjct: 179 FRQWRQQVVMGRARQLQQQGQPLSRIALELGYGDFSAFSHAFNRFLREPAG 229 >UniRef50_Q3HKF1 Transcriptional regulator, AraC family n=2 Tax=Rhodobacteraceae RepID=Q3HKF1_RHOS4 Length = 254 Score = 150 bits (379), Expect = 5e-35, Method: Composition-based stats. Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 6/260 (2%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 M R + G+ D + V I + T H H +GQL +T L + Sbjct: 1 MQRDEIGGFAED---GSPVIGRITSFTPGTMPEAHAHWRGQLAWCPDRPVTVETGGRLHL 57 Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANR 121 + P A+W+P H + + L+ P+A +P + L EL+ TLA Sbjct: 58 LSPGMAIWLPPTHRHRIRAEGARKSVSLYTRPAAAPLPKAPTPFPLEALEAELLRTLAGS 117 Query: 122 TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWA 181 + R EP RL VL+D L + + + P++R + +L WA Sbjct: 118 SRADRQEPAFARLTAVLWDRLARPAPAPTLP-LPTDPRLRRIALAHLD--GADHSLDHWA 174 Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241 A+S R+L RL ++TG S+ W + L+L A+ L+ G +VQ AH GY + + F+ Sbjct: 175 AALALSRRSLQRLARRDTGQSWTTWMRDLRLARAIAPLMAGKSVQHAAHAAGYATASGFV 234 Query: 242 TMFKKGLGQTPGRYIARLTT 261 F+ G TPG+ R+ + Sbjct: 235 AAFQAAHGITPGQLQRRIES 254 >UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZGK8_EUBR3 Length = 285 Score = 150 bits (378), Expect = 5e-35, Method: Composition-based stats. Identities = 60/284 (21%), Positives = 114/284 (40%), Gaps = 30/284 (10%) Query: 1 MMHRLNLNGYEPDRHHE-AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENAL 59 M+ LN +E ++ E + V I+A ++ P+H H ++I+ L G T + + L Sbjct: 1 MIENLN-GIHETVKYKEYSNVKLFINAEAEDY--PIHWHTPMEIIMPLEGGYTVQIGDDL 57 Query: 60 WMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT--------MPTTCCTLKISP-- 109 + ++I GV+H + L IE SAV+ + + ++P Sbjct: 58 VHLNENDIIFIASGVKHRLIAPDTGKRLILQIEWSAVSKIKELNSILTLIAPAITLTPET 117 Query: 110 ------LCRELILTLANRTTTQR---AEPMTRRLIQVLFDELPQQPQQQLHLPVSSHP-- 158 R+L+L ++N T + ++++VL H V H Sbjct: 118 SGDIHSNIRKLLLDISNEYQTDSFLSEAVIYSKILEVLVLIGRHHTASSCHFNVGRHKQQ 177 Query: 159 ----KIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 + ++ E + E L + A S+ + RL + T +F ++ Q ++ + Sbjct: 178 EYLERFLSICEYIDTHCTEDITLDEIAKIAGFSKYHFTRLFKQFTNNTFYKYLNQKRIEL 237 Query: 215 ALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 AL L +V + A G+ + + FI +FK G TP + Sbjct: 238 ALTLLADPNISVTETAMQSGFANPSTFIRVFKTEKGCTPTEFRK 281 >UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=Dickeya dadantii Ech703 RepID=C6C3E5_DICDC Length = 296 Score = 147 bits (372), Expect = 3e-34, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 108/285 (37%), Gaps = 26/285 (9%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 M L D A + + + P+H H +L++ G + + Sbjct: 1 MQSRGLKLQTEDYFLTEKNAVTVAERSPQSAFPLHHHDFDELVIVWRGNGLHIWNDVPYR 60 Query: 62 VPPQYAVWIPGGVEHSNQVTANAEL-CFLFIEPSAVTMPTTCCTLKIS------------ 108 + ++ HS + EL L+I P +T+PT L Sbjct: 61 ITCGDLFYVTADDRHSYESVHALELDNILYIRP-RLTLPTDWQNLLPDGGVAQQQRYWRL 119 Query: 109 -----PLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTM 163 + R+ + +L +++P++ +L +VL ++ + H P + Sbjct: 120 GEQGMAIIRDRVESLTQEC--MKSDPLSLQLSEVLLMQIALLALRYRHAPGETQLADAHQ 177 Query: 164 VEMMAKGP----VEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGL 219 ++++ + L + + S R+L ++TG+S Q+ +QL+L A++ L Sbjct: 178 LDLLMNALRDSIAQPFRLEAFCQQYGFSLRSLRSRFKQQTGMSVSQYLRQLRLCRAMELL 237 Query: 220 V-KGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVS 263 T+ +VA G+D + F +F + G TP Y R T S Sbjct: 238 RYDRQTISEVAAQCGFDDSNYFSVVFHQAFGVTPSSYRQRFQTRS 282 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76241 Uncharacterized HTH-type transcriptional regulat... 305 7e-82 UniRef50_Q1ZT94 Putative transcriptional regulator n=3 Tax=Photo... 276 4e-73 UniRef50_D1RWK8 Transcriptional regulatory protein n=2 Tax=Gamma... 271 2e-71 UniRef50_C5AN13 Helix-turn-helix-domain containing protein AraC ... 269 8e-71 UniRef50_C3KCF4 Putative transcriptional regulator n=1 Tax=Pseud... 268 1e-70 UniRef50_Q0B1C2 Transcriptional regulator, AraC family n=5 Tax=P... 268 1e-70 UniRef50_Q2F9R4 AraC-type DNA-binding domain-containing protein ... 266 6e-70 UniRef50_A8G9B2 Transcriptional regulator, AraC family n=4 Tax=c... 265 1e-69 UniRef50_Q216D2 Transcriptional regulator, AraC family n=7 Tax=B... 264 3e-69 UniRef50_Q2SP75 AraC-type DNA-binding domain-containing protein ... 263 6e-69 UniRef50_Q0BZS2 Transcriptional regulator, AraC family n=1 Tax=H... 261 1e-68 UniRef50_B5RKL9 Transcriptional regulator, AraC family n=2 Tax=c... 259 6e-68 UniRef50_B6JB31 Transcriptional regulator, AraC-family n=5 Tax=P... 259 9e-68 UniRef50_A4JQ17 Transcriptional regulator, AraC family n=56 Tax=... 258 2e-67 UniRef50_Q11DK3 Transcriptional regulator, AraC family n=1 Tax=C... 256 7e-67 UniRef50_Q391T4 Transcriptional regulator, AraC family n=8 Tax=P... 256 7e-67 UniRef50_C5CZV0 Transcriptional regulator, AraC family n=1 Tax=V... 255 1e-66 UniRef50_Q4K821 Transcriptional regulator, AraC family n=22 Tax=... 253 5e-66 UniRef50_A5GBQ3 Transcriptional regulator, AraC family n=2 Tax=B... 253 5e-66 UniRef50_C3K8M6 Putative AraC-family regulatory protein n=1 Tax=... 253 6e-66 UniRef50_B8J3U2 Transcriptional regulator, AraC family n=2 Tax=P... 253 7e-66 UniRef50_D2M677 Transcriptional regulator, AraC family n=1 Tax=R... 252 1e-65 UniRef50_Q0B9P3 Transcriptional regulator, AraC family n=14 Tax=... 250 3e-65 UniRef50_Q47EU9 Transcriptional regulator, AraC family n=4 Tax=B... 250 3e-65 UniRef50_Q4K9E0 Transcriptional regulator, AraC family n=1 Tax=P... 250 3e-65 UniRef50_A6W2J3 Transcriptional regulator, AraC family n=1 Tax=M... 250 5e-65 UniRef50_Q14GY1 Transcriptional regulator araC family protein n=... 250 6e-65 UniRef50_B0VLM5 Putative transcriptional regulator (AraC family)... 249 6e-65 UniRef50_Q39GD4 Transcriptional regulator, AraC family n=7 Tax=B... 248 1e-64 UniRef50_A6W3J4 Helix-turn-helix-domain containing protein AraC ... 248 1e-64 UniRef50_D1RUP3 Transcriptional regulatory protein n=2 Tax=Enter... 248 2e-64 UniRef50_A3QGH9 Transcriptional regulator, AraC family n=1 Tax=S... 247 3e-64 UniRef50_Q7W072 Probable transcriptional regulator n=3 Tax=Borde... 246 4e-64 UniRef50_A0AX10 Transcriptional regulator, AraC family n=6 Tax=B... 246 6e-64 UniRef50_A8I0S5 Transcriptional regulator n=1 Tax=Azorhizobium c... 246 6e-64 UniRef50_B4SJK4 Transcriptional regulator, AraC family n=4 Tax=P... 246 7e-64 UniRef50_A1K8N6 Putative AraC-family transcriptional regulator n... 246 8e-64 UniRef50_Q2BLH8 Transcriptional Regulator, AraC family protein n... 245 1e-63 UniRef50_A9FA95 Transcriptional regulator, AraC family n=2 Tax=P... 245 1e-63 UniRef50_A9HXG4 Transcriptional regulator, AraC family n=3 Tax=P... 244 3e-63 UniRef50_Q47Y50 Transcriptional regulator, araC family n=1 Tax=C... 243 4e-63 UniRef50_B4SSQ8 Transcriptional regulator, AraC family n=3 Tax=S... 243 4e-63 UniRef50_Q221Z0 Transcriptional regulator, AraC family n=9 Tax=P... 242 9e-63 UniRef50_C1DH76 Transcriptional regulator, AraC-family n=3 Tax=P... 242 1e-62 UniRef50_Q13ID0 Transcriptional regulator, AraC family n=1 Tax=B... 242 1e-62 UniRef50_B0UH11 Transcriptional regulator, AraC family n=3 Tax=R... 241 3e-62 UniRef50_D1SXH7 Transcriptional regulator, AraC family n=1 Tax=A... 241 3e-62 UniRef50_Q2RRF5 Transcriptional regulator, AraC family n=2 Tax=A... 240 5e-62 UniRef50_A4WDQ0 Transcriptional regulator, AraC family n=18 Tax=... 240 5e-62 UniRef50_Q8L1B2 Transcriptional factor PhcT (Fragment) n=1 Tax=C... 239 9e-62 UniRef50_D0J513 Pyridoxamine 5'-phosphate oxidase-related protei... 239 1e-61 UniRef50_Q15UL1 Transcriptional regulator, AraC family n=3 Tax=A... 238 1e-61 UniRef50_Q4ZYQ3 Helix-turn-helix, AraC type:Arac protein, arabin... 238 2e-61 UniRef50_B3RAF2 Putative Transcriptional Regulator, AraC family ... 238 2e-61 UniRef50_D0B292 Transcriptional regulator n=40 Tax=Rhizobiales R... 237 3e-61 UniRef50_B0RW44 Transcriptional regulator, AraC family n=6 Tax=X... 237 3e-61 UniRef50_B3QB90 Transcriptional regulator, AraC family n=3 Tax=A... 237 3e-61 UniRef50_A3Y5B2 Probable transcriptional regulator n=1 Tax=Marin... 237 3e-61 UniRef50_Q11FA3 Transcriptional regulator, AraC family n=1 Tax=C... 237 4e-61 UniRef50_Q2SEK4 AraC-type DNA-binding domain-containing protein ... 236 5e-61 UniRef50_Q2K0F2 Probable transcriptional regulator protein, AraC... 236 8e-61 UniRef50_B1TGD6 Transcriptional regulator, AraC family n=7 Tax=P... 236 8e-61 UniRef50_B4EJY3 AraC family regulatory protein n=10 Tax=Burkhold... 235 9e-61 UniRef50_B4SQ42 Transcriptional regulator, AraC family n=5 Tax=X... 235 1e-60 UniRef50_Q4K6D5 Transcriptional regulator, AraC family n=8 Tax=P... 235 1e-60 UniRef50_B5WKD5 Transcriptional regulator, AraC family n=1 Tax=B... 235 1e-60 UniRef50_A4CF02 Transcriptional regulator, araC family protein n... 234 3e-60 UniRef50_D1P6X5 Transcriptional regulator, AraC family n=1 Tax=P... 234 3e-60 UniRef50_B7GW45 Bacterial regulatory helix-turn-helix protein, A... 233 7e-60 UniRef50_A9IA98 Transcriptional regulator, AraC family n=1 Tax=B... 232 9e-60 UniRef50_A6WQB9 Helix-turn-helix-domain containing protein AraC ... 232 1e-59 UniRef50_A5FCF5 Transcriptional regulator, AraC family n=1 Tax=F... 231 1e-59 UniRef50_C9PF84 Transcriptional regulator AraC family n=1 Tax=Vi... 231 2e-59 UniRef50_B6ELX6 HTH-type transcriptional regulator, AraC family ... 231 2e-59 UniRef50_A0NPK3 Probable transcriptional regulator protein, AraC... 231 2e-59 UniRef50_A3RTS8 Transcriptional regulator, AraC family n=4 Tax=R... 231 3e-59 UniRef50_Q2BIT2 Transcriptional regulator, AraC family protein n... 230 3e-59 UniRef50_C1MBM6 Transcriptional regulator n=2 Tax=Citrobacter Re... 230 3e-59 UniRef50_Q28MP8 Transcriptional regulator, AraC family n=1 Tax=J... 230 4e-59 UniRef50_B2I1A9 AraC-type DNA-binding domain-containing protein ... 230 5e-59 UniRef50_Q3JQZ2 Transcriptional regulator, AraC family n=59 Tax=... 229 7e-59 UniRef50_A9ISK4 Transcriptional regulator, AraC family n=3 Tax=P... 229 9e-59 UniRef50_A5V470 Transcriptional regulator, AraC family n=1 Tax=S... 229 1e-58 UniRef50_B1JGH9 Transcriptional regulator, AraC family n=26 Tax=... 228 1e-58 UniRef50_C4XL68 AraC family transcriptional regulator n=2 Tax=De... 228 1e-58 UniRef50_C6RQZ7 Transcriptional regulator, AraC family n=1 Tax=A... 228 2e-58 UniRef50_A7K1S8 Transcriptional regulator AraC family protein n=... 228 2e-58 UniRef50_A1TK09 Transcriptional regulator, AraC family n=4 Tax=P... 227 3e-58 UniRef50_Q5E435 Transcriptional regulator, AraC family n=3 Tax=V... 227 4e-58 UniRef50_Q7MFB7 AraC-type DNA-binding domain-containing protein ... 227 4e-58 UniRef50_Q0KFJ5 Transcriptional regulator, AraC-family n=11 Tax=... 226 4e-58 UniRef50_A3D530 Transcriptional regulator, AraC family n=12 Tax=... 226 5e-58 UniRef50_Q1ZB18 Transcriptional Regulator, AraC family protein n... 226 7e-58 UniRef50_B5EUU3 Transcriptional regulator, AraC/XylS family n=29... 226 8e-58 UniRef50_Q2KXY1 AraC-family transcriptional regulator n=5 Tax=Pr... 225 1e-57 UniRef50_C6CCZ8 Transcriptional regulator, AraC family n=3 Tax=D... 224 2e-57 UniRef50_B7UVC2 Probable transcriptional regulator n=6 Tax=Pseud... 224 2e-57 UniRef50_C7MAZ5 Transcriptional regulator containing an amidase ... 224 2e-57 UniRef50_C0YIN0 AraC/XylS family transcriptional regulator n=1 T... 224 2e-57 UniRef50_B1KGB7 Transcriptional regulator, AraC family n=2 Tax=S... 224 3e-57 UniRef50_A9ILC9 Transcriptional regulator, AraC family n=3 Tax=B... 224 3e-57 UniRef50_B2UKA3 Transcriptional regulator, AraC family n=8 Tax=B... 224 3e-57 UniRef50_B1JZJ0 Transcriptional regulator, AraC family n=2 Tax=B... 224 3e-57 UniRef50_A6V4X5 Probable transcriptional regulator n=7 Tax=Pseud... 223 4e-57 UniRef50_Q7CRR0 Transcriptional regulator, AraC family n=4 Tax=R... 223 4e-57 UniRef50_Q39NN6 Transcriptional regulator, AraC family n=9 Tax=B... 223 5e-57 UniRef50_A6V354 Transcriptional regulator, AraC family n=3 Tax=P... 223 5e-57 UniRef50_B7GXZ6 Bacterial regulatory helix-turn-helix protein, A... 223 6e-57 UniRef50_A8GH45 Transcriptional regulator, AraC family n=18 Tax=... 223 6e-57 UniRef50_Q7D3B7 Transcriptional regulator. AraC family n=2 Tax=A... 223 6e-57 UniRef50_C8Q2C9 Transcriptional regulator, AraC family n=1 Tax=P... 223 8e-57 UniRef50_C5CUS1 Transcriptional regulator, AraC family n=1 Tax=V... 222 9e-57 UniRef50_D2B3A1 AraC family transcriptional regulator n=5 Tax=Ac... 222 9e-57 UniRef50_Q7D2T6 Transcriptional regulator, AraC family n=7 Tax=P... 222 1e-56 UniRef50_Q01YV9 Transcriptional regulator, AraC family n=1 Tax=C... 221 1e-56 UniRef50_A5F0T8 Transcriptional regulator, AraC/XylS family n=40... 221 2e-56 UniRef50_C9NXQ1 Transcriptional regulator AraC family n=1 Tax=Vi... 221 2e-56 UniRef50_Q4KJ22 Transcriptional regulator, AraC family n=7 Tax=P... 221 2e-56 UniRef50_Q2BQ21 Transcriptional regulator, AraC family protein n... 221 2e-56 UniRef50_UPI00019092C6 AraC family transcriptional regulator n=1... 221 3e-56 UniRef50_D1X8C9 Transcriptional regulator, AraC family n=2 Tax=S... 221 3e-56 UniRef50_D0J7G0 Transcriptional regulator, AraC family n=11 Tax=... 220 4e-56 UniRef50_C3JKZ1 Transcriptional regulator, AraC family n=2 Tax=R... 220 5e-56 UniRef50_D1XHM7 Transcriptional regulator, AraC family n=1 Tax=S... 219 9e-56 UniRef50_B9JII8 Transcriptional regulator protein n=1 Tax=Agroba... 218 2e-55 UniRef50_A8AKK6 Putative uncharacterized protein n=1 Tax=Citroba... 218 2e-55 UniRef50_Q47UH5 Substrate-binding transcriptional regulator, Ara... 218 2e-55 UniRef50_A8GAI3 Transcriptional regulator, AraC family n=2 Tax=S... 218 2e-55 UniRef50_B9R0N9 Transcriptional regulator, AraC family protein n... 217 3e-55 UniRef50_C7JHN7 Transcriptional regulator AraC n=8 Tax=Acetobact... 217 3e-55 UniRef50_C8QEY4 Transcriptional regulator, AraC family n=1 Tax=P... 217 3e-55 UniRef50_Q0TI30 Transcriptional regulator, AraC family n=14 Tax=... 217 4e-55 UniRef50_Q7VTI7 AraC-family regulatory protein n=3 Tax=Bordetell... 216 8e-55 UniRef50_Q7NRZ6 Probable transcriptional regulator AraC family n... 216 9e-55 UniRef50_A6VY36 Helix-turn-helix-domain containing protein AraC ... 215 1e-54 UniRef50_B3Q9E6 Transcriptional regulator, AraC family n=2 Tax=R... 215 1e-54 UniRef50_Q13M62 Transcriptional regulator, AraC family n=4 Tax=B... 215 1e-54 UniRef50_A1BBK0 Transcriptional regulator, AraC family n=2 Tax=A... 214 2e-54 UniRef50_D1VDY4 Transcriptional regulator, AraC family n=1 Tax=F... 214 3e-54 UniRef50_UPI0001B55F3C AraC family transcriptional regulator n=3... 214 3e-54 UniRef50_C4WMA6 AraC family transcriptional regulator n=1 Tax=Oc... 214 3e-54 UniRef50_C8QCP4 Transcriptional regulator, AraC family n=1 Tax=P... 213 4e-54 UniRef50_B4SMW0 Transcriptional regulator, AraC family n=3 Tax=S... 213 4e-54 UniRef50_B0T088 Transcriptional regulator, AraC family n=1 Tax=C... 213 7e-54 UniRef50_A1VPE7 Transcriptional regulator, AraC family n=2 Tax=C... 213 7e-54 UniRef50_A8T3D4 AraC-type DNA-binding domain-containing protein ... 212 8e-54 UniRef50_Q13VV8 Transcriptional regulator, AraC family n=2 Tax=P... 211 1e-53 UniRef50_B1LVX0 Transcriptional regulator, AraC family n=3 Tax=R... 211 2e-53 UniRef50_B4EHM1 AraC family regulatory protein n=5 Tax=Burkholde... 211 2e-53 UniRef50_C6DFV4 Transcriptional regulator, AraC family n=1 Tax=P... 211 2e-53 UniRef50_C9PF82 Substrate-binding transcriptional regulator AraC... 211 3e-53 UniRef50_C4WPU9 AraC family transcriptional regulator n=1 Tax=Oc... 210 3e-53 UniRef50_A8G994 Transcriptional regulator, AraC family n=12 Tax=... 210 5e-53 UniRef50_C7I316 Transcriptional regulator, AraC family n=1 Tax=T... 209 6e-53 UniRef50_C1A6S8 AraC family transcriptional regulator n=1 Tax=Ge... 209 8e-53 UniRef50_Q2L001 AraC-family transcriptional regulator n=4 Tax=Bo... 209 1e-52 UniRef50_A9BNM6 Transcriptional regulator, AraC family n=3 Tax=P... 208 1e-52 UniRef50_B5GYF3 AraC-family transcriptional regulator n=4 Tax=Ac... 208 1e-52 UniRef50_Q5FU43 Transcriptional regulator, AraC family n=1 Tax=G... 208 2e-52 UniRef50_Q8EHW8 Transcriptional regulator, AraC/XylS family n=3 ... 208 2e-52 UniRef50_C0YRY4 AraC family transcriptional regulator n=1 Tax=Ch... 208 2e-52 UniRef50_B4SKF1 Transcriptional regulator, AraC family n=2 Tax=S... 207 3e-52 UniRef50_Q5LMG8 Transcriptional regulator, AraC family n=1 Tax=R... 207 3e-52 UniRef50_Q0B8S9 Transcriptional regulator, AraC family n=1 Tax=B... 207 3e-52 UniRef50_D1UHS6 Transcriptional regulator, AraC family n=1 Tax=B... 207 4e-52 UniRef50_A9BQK3 Transcriptional regulator, AraC family n=8 Tax=B... 206 5e-52 UniRef50_D1XNW1 Transcriptional regulator, AraC family n=1 Tax=S... 206 5e-52 UniRef50_D2BBL9 Transcriptional regulator, AraC-family n=18 Tax=... 206 6e-52 UniRef50_D0L975 Helix-turn-helix-domain containing protein AraC ... 206 8e-52 UniRef50_Q3JG82 AraC family regulatory protein n=50 Tax=Proteoba... 205 1e-51 UniRef50_A0KEB0 Transcriptional regulator, AraC/XylS family n=25... 205 2e-51 UniRef50_B5XX95 Transcriptional regulator, AraC family n=7 Tax=E... 204 2e-51 UniRef50_A5U9G2 AraC-family transcriptional regulator n=12 Tax=M... 204 2e-51 UniRef50_A5FK83 Transcriptional regulator, AraC family n=3 Tax=B... 204 2e-51 UniRef50_A0KTL0 Transcriptional regulator, AraC family n=25 Tax=... 204 2e-51 UniRef50_Q1ZV01 Transcriptional regulator, AraC family protein n... 204 4e-51 UniRef50_A8L2S5 Transcriptional regulator, AraC family n=3 Tax=A... 203 4e-51 UniRef50_D1BGA1 DNA-binding domain-containing protein, AraC-type... 203 5e-51 UniRef50_B9TN09 HTH-type transcriptional repressor of iron prote... 203 6e-51 UniRef50_D1XRU9 Transcriptional regulator, AraC family n=4 Tax=A... 202 1e-50 UniRef50_C3JM12 Transcriptional regulator, AraC family n=2 Tax=R... 202 1e-50 UniRef50_A0KHN7 Transcriptional regulator, AraC family n=1 Tax=A... 201 2e-50 UniRef50_B4SPX2 AraC protein arabinose-binding/dimerisation n=2 ... 201 2e-50 UniRef50_C3X452 Putative uncharacterized protein n=2 Tax=Oxaloba... 200 4e-50 UniRef50_C9PG34 Transcriptional regulator AraC family n=1 Tax=Vi... 200 4e-50 UniRef50_D1WVC3 Transcriptional regulator, AraC family n=3 Tax=A... 200 4e-50 UniRef50_A0R133 Transcriptional regulator, AraC family protein n... 199 7e-50 UniRef50_Q13JN4 Transcriptional regulator, AraC family n=13 Tax=... 199 1e-49 UniRef50_D1BCS3 DNA-binding domain-containing protein, AraC-type... 199 1e-49 UniRef50_C3JND7 Transcriptional regulator, AraC family n=2 Tax=R... 197 4e-49 UniRef50_C3JWU5 Transcriptional regulator, AraC family n=4 Tax=R... 196 5e-49 UniRef50_Q212B5 Transcriptional regulator, AraC family n=1 Tax=R... 196 5e-49 UniRef50_C0YKZ5 AraC family transcriptional regulator n=1 Tax=Ch... 196 5e-49 UniRef50_B0TZR0 Transcriptional regulator, AraC family n=1 Tax=F... 196 6e-49 UniRef50_Q28KW4 Transcriptional regulator, AraC family n=1 Tax=J... 195 1e-48 UniRef50_C8QA12 Transcriptional regulator, AraC family n=1 Tax=P... 195 1e-48 UniRef50_B5I4G1 AraC-family transcriptional regulator n=1 Tax=St... 194 2e-48 UniRef50_A8L421 Transcriptional regulator, AraC family n=12 Tax=... 194 3e-48 UniRef50_B9K583 Transcriptional regulator n=3 Tax=Alphaproteobac... 193 4e-48 UniRef50_A6SYJ9 Transcriptional regulator, AraC family n=2 Tax=O... 193 5e-48 UniRef50_D0J7V7 Transcriptional regulator, AraC family n=6 Tax=P... 193 6e-48 UniRef50_C3JLV5 AraC-family transcriptional regulator n=2 Tax=Rh... 191 2e-47 UniRef50_C3JVD6 Transcriptional regulator, AraC family n=3 Tax=R... 191 2e-47 UniRef50_D1BBW6 DNA-binding domain-containing protein, AraC-type... 191 2e-47 UniRef50_C0YJ90 AraC family transcriptional regulator n=1 Tax=Ch... 190 3e-47 UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacte... 190 4e-47 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 189 9e-47 UniRef50_D1BHF8 DNA-binding domain-containing protein, AraC-type... 189 1e-46 UniRef50_A6ED21 Transcriptional regulator, AraC family protein n... 188 1e-46 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 188 2e-46 UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostri... 188 2e-46 UniRef50_A8LCQ9 Transcriptional regulator, AraC family n=1 Tax=F... 187 4e-46 UniRef50_Q7NRR7 Probable transcriptional regulator n=1 Tax=Chrom... 187 4e-46 UniRef50_UPI000050FCF9 AraC family transcriptional regulator n=1... 187 4e-46 UniRef50_A5VF29 Transcriptional regulator, AraC family n=2 Tax=A... 186 5e-46 UniRef50_Q2NTH9 Putative transcriptional regulator n=1 Tax=Sodal... 186 6e-46 UniRef50_C7PA31 Transcriptional regulator, AraC family n=1 Tax=C... 186 7e-46 UniRef50_Q7UTW3 Transcription regulator n=1 Tax=Rhodopirellula b... 186 9e-46 UniRef50_A8U313 Helix-turn-helix, AraC type:Arac protein, arabin... 185 2e-45 UniRef50_Q5WI14 AraC/XylS family transcriptional regulator n=1 T... 184 3e-45 UniRef50_Q28SV1 Transcriptional regulator, AraC family n=1 Tax=J... 183 4e-45 UniRef50_A5EPW3 Transcriptional regulator, AraC family n=3 Tax=B... 183 4e-45 UniRef50_A3XQJ9 Probable transcription regulator protein n=1 Tax... 183 6e-45 UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=D... 183 7e-45 UniRef50_Q091X7 Helix-turn-helix, AraC type n=1 Tax=Stigmatella ... 182 8e-45 UniRef50_C2FVA1 AraC family transcriptional regulator n=1 Tax=Sp... 182 1e-44 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 181 2e-44 UniRef50_B5CUH6 Putative uncharacterized protein n=1 Tax=Bactero... 181 2e-44 UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminoc... 181 3e-44 UniRef50_B0MGZ5 Putative uncharacterized protein n=1 Tax=Anaeros... 180 4e-44 UniRef50_D1BFL9 DNA-binding domain-containing protein, AraC-type... 180 4e-44 UniRef50_UPI000197B237 hypothetical protein BACCOPRO_02201 n=1 T... 180 5e-44 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 180 5e-44 UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=R... 180 5e-44 UniRef50_D1VIF5 Transcriptional regulator, AraC family n=1 Tax=F... 179 6e-44 UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus R... 179 7e-44 UniRef50_C5PU57 AraC family transcriptional regulator n=1 Tax=Sp... 179 7e-44 UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium R... 179 9e-44 UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=C... 179 9e-44 UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=P... 179 9e-44 UniRef50_A9GKK5 Transcriptional regulator, AraC family n=1 Tax=S... 179 1e-43 UniRef50_D0LZ72 Transcriptional regulator, AraC family n=1 Tax=H... 178 1e-43 UniRef50_Q2S7S2 AraC-type DNA-binding domain-containing protein ... 178 2e-43 UniRef50_C5PVX4 AraC family transcriptional regulator n=2 Tax=Sp... 177 3e-43 UniRef50_Q84HW2 Transcription regulator n=1 Tax=Rhizobium sp. TA... 177 3e-43 UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=D... 177 3e-43 UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan... 177 4e-43 UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Pa... 177 4e-43 UniRef50_C7PGY2 Transcriptional regulator, AraC family n=1 Tax=C... 177 4e-43 UniRef50_A6GAR4 Putative transcriptional regulator n=1 Tax=Plesi... 176 5e-43 Sequences not found previously or not previously below threshold: >UniRef50_P76241 Uncharacterized HTH-type transcriptional regulator yeaM n=55 Tax=Enterobacteriaceae RepID=YEAM_ECOLI Length = 273 Score = 305 bits (783), Expect = 7e-82, Method: Composition-based stats. Identities = 273/273 (100%), Positives = 273/273 (100%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW Sbjct: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN Sbjct: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120 Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW Sbjct: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180 Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF Sbjct: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240 Query: 241 ITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ 273 ITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ Sbjct: 241 ITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ 273 >UniRef50_Q1ZT94 Putative transcriptional regulator n=3 Tax=Photobacterium RepID=Q1ZT94_PHOAS Length = 266 Score = 276 bits (708), Expect = 4e-73, Method: Composition-based stats. Identities = 107/263 (40%), Positives = 154/263 (58%), Gaps = 4/263 (1%) Query: 1 MMHRLNLN----GYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVE 56 M + LN ++ D + + AVA + P H HRKGQL+L L G + C + Sbjct: 1 MTKNITLNKTIPSFDSDSYSQKAVAMRFSRSDVDEELPFHTHRKGQLVLPLSGCVRCKIA 60 Query: 57 NALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELIL 116 NA+WMVP AVWIP V HS ++ + ++C LFIEP + +P CTL +SPL RELI+ Sbjct: 61 NAIWMVPTNCAVWIPSQVPHSLTISDDIDICNLFIEPDVIGLPEKACTLSVSPLLRELIV 120 Query: 117 TLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGA 176 LA E T RL+ VL EL P +Q P+ P+++ + + P + Sbjct: 121 KLAELDQFYEDEGNTARLVDVLIYELSTMPSEQFDFPIPEEPRLQKIALALIANPSDRST 180 Query: 177 LGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDS 236 +G+WA +AMSER LARL+ +E GL+F WR QL +++ALQ L G+ VQ+++ LGY+S Sbjct: 181 VGEWASKYAMSERTLARLVKQELGLTFGNWRGQLHIVIALQKLSSGEPVQRISEDLGYES 240 Query: 237 TTAFITMFKKGLGQTPGRYIARL 259 +AFIT FK+ LG+ P +YI + Sbjct: 241 VSAFITFFKRTLGRPPKQYIKKR 263 >UniRef50_D1RWK8 Transcriptional regulatory protein n=2 Tax=Gammaproteobacteria RepID=D1RWK8_SEROD Length = 284 Score = 271 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 105/270 (38%), Positives = 153/270 (56%), Gaps = 1/270 (0%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 +M + ++ D+ A A + + H+HRK QLI + G I C EN LW Sbjct: 12 LMPVITEPRFDIDQVPRAIFAVQGSTISSDWEMAPHRHRKAQLIYTVRGMIRCEAENGLW 71 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA 119 +VPPQ A+W+PG V H+ Q + E LF++ A+ +PT CCTL +SPL REL+L + Sbjct: 72 LVPPQCALWMPGNVLHNAQGAGDTECYCLFVDQDAIAGLPTHCCTLAVSPLLRELLLQAS 131 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 + RL VL D++ P + LHLPVS +IR + E + P + L Q Sbjct: 132 GFDPLYDEQGPEGRLTTVLLDQVVNAPIENLHLPVSQDARIRQLTERLLANPADKATLNQ 191 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 WA MSER+L R + ++ G+SF WR+QL +++ALQ L KGD+VQKVA LGY+S + Sbjct: 192 WAQRIGMSERSLNRTLQQQMGMSFGHWRRQLHVMLALQRLTKGDSVQKVALDLGYESASG 251 Query: 240 FITMFKKGLGQTPGRYIARLTTVSPQSAKP 269 F+TMF+K +G+ P RY+A + + Sbjct: 252 FVTMFRKAVGKPPARYLAERSAAGQAAGSG 281 >UniRef50_C5AN13 Helix-turn-helix-domain containing protein AraC type n=15 Tax=cellular organisms RepID=C5AN13_BURGB Length = 283 Score = 269 bits (688), Expect = 8e-71, Method: Composition-based stats. Identities = 101/258 (39%), Positives = 154/258 (59%), Gaps = 1/258 (0%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 + D VA T + H+HR+ QL+ ++ G + C +E+ +W+VPPQ AVWI Sbjct: 14 DVDNVPRPVVALSAMTVTKDWEHAKHRHRRAQLLYSVRGILNCEIEDGVWIVPPQCAVWI 73 Query: 71 PGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129 PG + H+ + + E LF+EP A +P +CCT+ +SPL REL+L +A Sbjct: 74 PGDLPHAARGSGETECHCLFVEPDAAPDLPKSCCTISVSPLLRELLLKVACFPELYPLGS 133 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 RLI VL DEL P + LHLP+ P++R + EM+ P + + G WA MSER Sbjct: 134 REDRLIAVLLDELAMAPVEDLHLPMPRDPRLRRLAEMLLTDPTDKTSKGDWATRIGMSER 193 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 +++RL++ E G+SF +W +QL +I+ALQ L KG++VQ VA LGY++ + F+TMF+K +G Sbjct: 194 SMSRLLMHEIGMSFGRWCRQLHVILALQRLTKGESVQTVALELGYENASGFVTMFRKAVG 253 Query: 250 QTPGRYIARLTTVSPQSA 267 + P RY+A + +A Sbjct: 254 KPPARYLADRMVNARSAA 271 >UniRef50_C3KCF4 Putative transcriptional regulator n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KCF4_PSEFS Length = 257 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 76/258 (29%), Positives = 124/258 (48%), Gaps = 2/258 (0%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 M+ LN E + A ++ + P H H K QL+ A+ G + W Sbjct: 1 MIKPLNEFLQEINEGAWAVISSATDY-PENWVIPDHSHEKHQLLYAIEGVMVVYSALNQW 59 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA 119 VPP +W+P G HS + ++ +F+ P MP T+ ISPL ELI Sbjct: 60 TVPPNRGIWMPSGQVHSLRCVGTLKMRSVFVRPDRFPNMPGEPKTVSISPLLSELIKASV 119 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 + + R++ ++ DEL P L LP + P+I+ + + P + + Sbjct: 120 SLKPPYAEDSREARIMHLILDELAILPALPLALPQPADPRIKQICLALQDDPGDASTVAD 179 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 W+ + + + RL K TG++F QWRQQ +L++AL+ + G+ V +A LGY+S +A Sbjct: 180 WSARLNLDQTTIQRLFRKATGMTFGQWRQQARLLLALERIAVGEKVIDIALELGYESPSA 239 Query: 240 FITMFKKGLGQTPGRYIA 257 F +MFKK G+TP ++ Sbjct: 240 FTSMFKKQFGKTPSQFFR 257 >UniRef50_Q0B1C2 Transcriptional regulator, AraC family n=5 Tax=Proteobacteria RepID=Q0B1C2_BURCM Length = 273 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 98/262 (37%), Positives = 152/262 (58%) Query: 4 RLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63 ++N ++PD ++ + E P+H HRKGQ+++AL G++ C + W+VP Sbjct: 12 KINYQPFDPDSVDLPVISVLLETSGKEDELPMHVHRKGQMVVALSGSVMCRSPSGWWIVP 71 Query: 64 PQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTT 123 P AVWIPGG+ HSN + A+L +FI P +PT C + I+PL RELI +LA Sbjct: 72 PNGAVWIPGGIPHSNHASDFAKLYVIFIPPDEAGLPTDCRSFTITPLIRELIRSLARFPP 131 Query: 124 TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183 + RL +VL D+L + LP+S +P+++ + + P + + +W Sbjct: 132 DYPKDGPVGRLARVLLDQLALLAPDDVFLPISDNPRLQQIASALLDNPADRSTIAEWGRR 191 Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITM 243 +AMSER LARL+ ETG++F +WR++L +I+ALQ L G +V VA LGY+ +FITM Sbjct: 192 YAMSERTLARLVRSETGMTFGRWRERLHIIIALQRLSAGASVHAVALELGYEGPNSFITM 251 Query: 244 FKKGLGQTPGRYIARLTTVSPQ 265 FKK +GQ+PG++ S + Sbjct: 252 FKKTMGQSPGKFRVDNKEASSR 273 >UniRef50_Q2F9R4 AraC-type DNA-binding domain-containing protein n=2 Tax=Vibrionaceae RepID=Q2F9R4_9VIBR Length = 265 Score = 266 bits (680), Expect = 6e-70, Method: Composition-based stats. Identities = 81/257 (31%), Positives = 130/257 (50%), Gaps = 2/257 (0%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 M + + + + AV H + H HR QL+ A G + E+ LW Sbjct: 8 MSQNVKAISLDANINCLEAVVIPKHY-ANGHVIDWHCHRHNQLVYASSGVMAVETESKLW 66 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA 119 +VPPQ AVWIP H + +A + +++ PS T +P L +SP+ RE+I+ L+ Sbjct: 67 IVPPQRAVWIPAHESHKIHMYGDAAMKNVYLLPSIDTELPNQSDVLNVSPMLREMIIHLS 126 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 + Q + R++QVL D+L PQ + +P+ + K+ + + P + +L Q Sbjct: 127 EQPVVQASTDSYWRIVQVLLDQLKVAPQASIQVPLPNDAKLGLVCNSLLDKPADNRSLKQ 186 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 WA +S R L+RL E G+SF ++RQQ++L +L L + V VA G+ S +A Sbjct: 187 WAEEINVSSRTLSRLFRNEVGMSFIEYRQQVRLFHSLTLLAQTHPVTTVALECGFTSVSA 246 Query: 240 FITMFKKGLGQTPGRYI 256 F +FK+ G TPGR+ Sbjct: 247 FNHLFKQSFGVTPGRFF 263 >UniRef50_A8G9B2 Transcriptional regulator, AraC family n=4 Tax=cellular organisms RepID=A8G9B2_SERP5 Length = 284 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 104/270 (38%), Positives = 153/270 (56%), Gaps = 1/270 (0%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 +M + ++ D+ A A + H+HRK QLI + G I C VEN LW Sbjct: 12 LMTFITEPRFDIDQVPRAIFAVQGSTIDKDWEITHHRHRKAQLIYTVRGMIRCEVENGLW 71 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA 119 +VPPQ A+W+P V H+ Q + +E LF++ A+ +PT CCTL +SPL REL+ + Sbjct: 72 LVPPQCALWMPSNVLHNAQGASASECYCLFVDQDAIAGLPTHCCTLAVSPLLRELLFQAS 131 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 + RL VL D+L + P + LHLPVS+ +IR + E + P + LGQ Sbjct: 132 AFEQLYDQQGPEGRLAGVLLDQLVKAPVENLHLPVSNDARIRQLTERLLANPADKATLGQ 191 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 WA MSER+L R + ++ G+SF WR+QL +++ALQ L +GD+VQ+VA LGY+S + Sbjct: 192 WAQRIGMSERSLNRTLQQQMGMSFGHWRRQLHVVLALQRLTQGDSVQRVALDLGYESASG 251 Query: 240 FITMFKKGLGQTPGRYIARLTTVSPQSAKP 269 F+TMF+K +G+ P RY+A Sbjct: 252 FVTMFRKAVGKPPARYLAEKNAADRAQGAG 281 >UniRef50_Q216D2 Transcriptional regulator, AraC family n=7 Tax=Bacteria RepID=Q216D2_RHOPB Length = 280 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 109/270 (40%), Positives = 165/270 (61%), Gaps = 2/270 (0%) Query: 5 LNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPP 64 +PD VAF + L H+HRK QL+L+L G +TC ++ LW+VPP Sbjct: 9 DPAEWSDPDDIPRPVVAFGVTLAGPGLELAPHRHRKAQLLLSLRGVLTCEAQSGLWLVPP 68 Query: 65 QYAVWIPGGVEHSNQVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTT 123 Q+A+WIPGG H+ + T E +F+EP+ + MP +CCT+ ++PL REL++ A Sbjct: 69 QHAIWIPGGALHAIRATGTIEGYDIFVEPALTLGMPASCCTMSVTPLLRELLVRAAGFPL 128 Query: 124 TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183 L +L DE+ Q+L+LP+ + ++R +VE+M P + G + WA Sbjct: 129 LYPEGGAESHLFTLLLDEVATASVQRLYLPMPADVRLRRIVELMMADPTDRGTMASWAKR 188 Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITM 243 +SER LARL+ +ETG+SF +WRQQL +++ALQ + +G +Q++A LGY+S +F+TM Sbjct: 189 AGLSERTLARLLARETGMSFGRWRQQLTIMLALQRMAEGAPIQRLAVELGYESAASFVTM 248 Query: 244 FKKGLGQTPGRYIARLTTVSPQSAKPDPRQ 273 F+K LG +PGRY+ARL SP +A DP+Q Sbjct: 249 FRKTLGSSPGRYMARLRG-SPAAADQDPKQ 277 >UniRef50_Q2SP75 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SP75_HAHCH Length = 275 Score = 263 bits (672), Expect = 6e-69, Method: Composition-based stats. Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 3/256 (1%) Query: 9 GYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAV 68 Y P R VA H+H QLI A G + + +W++PPQ AV Sbjct: 21 EYMPIRGERPIVA-RAREFPSGYRVTPHKHECCQLIFATSGVMELVTDEGIWLIPPQRAV 79 Query: 69 WIPGGVEHSNQVTANAELCFLFIEPSAVT--MPTTCCTLKISPLCRELILTLANRTTTQR 126 W+P VEH + + L ++I+P A P TL+ISPL RELI+ + Sbjct: 80 WMPPNVEHGMRARGDVSLRTMYIQPHACPVSFPQKPRTLQISPLLRELIIRAMRVPSNYD 139 Query: 127 AEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAM 186 R++ ++ +E+ ++ L LP + +++ + + P + L W+ Sbjct: 140 EGGRDGRIMSLILEEIEWSGERPLRLPATRDSRLQNLCRAILANPADPRELKDWSTVIGA 199 Query: 187 SERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKK 246 SER L+RL E G+S++ WRQQ+ + A+ L GD V +A LGY++ +AF MF++ Sbjct: 200 SERTLSRLFRNELGVSYQYWRQQVAALNAIPRLAAGDPVTLIAADLGYETPSAFSAMFRR 259 Query: 247 GLGQTPGRYIARLTTV 262 +G P Y R + Sbjct: 260 IMGVAPSLYFQRQSES 275 >UniRef50_Q0BZS2 Transcriptional regulator, AraC family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZS2_HYPNA Length = 260 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 70/248 (28%), Positives = 115/248 (46%), Gaps = 1/248 (0%) Query: 8 NGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYA 67 + ++ D VA H H + QL+ A G ++ + +++PPQ A Sbjct: 12 STHQLDLSRRPVVALA-DEYPSGFVDTAHSHERIQLLYACSGVMSVVTDKTSFVIPPQRA 70 Query: 68 VWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRA 127 VWIP V+H L L+I+P C +++ L R LIL + Sbjct: 71 VWIPSQVQHEVSCRGPVSLRTLYIDPRYERDDPDCHIVEVGQLLRALILEVTQFEHDYDL 130 Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187 + +++ +L EL P+ P+ + P++ + + + P + + QWA MS Sbjct: 131 QGREGQIVSLLVSELLASPKVPYAAPMPTDPRLVRVCREIIEHPSDQRDIDQWADIAGMS 190 Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247 R+ R +ETG+ WRQQ++L+ AL L G +V VA +GYDS +AF MF++ Sbjct: 191 RRSFTRAFKRETGMGVALWRQQVRLLEALSLLSTGSSVTSVAMDVGYDSASAFCAMFQRA 250 Query: 248 LGQTPGRY 255 G +P RY Sbjct: 251 FGVSPSRY 258 >UniRef50_B5RKL9 Transcriptional regulator, AraC family n=2 Tax=cellular organisms RepID=B5RKL9_KLEP3 Length = 264 Score = 259 bits (663), Expect = 6e-68, Method: Composition-based stats. Identities = 124/254 (48%), Positives = 169/254 (66%) Query: 6 NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65 + + D +AA+A + + + H HRKGQLIL++ GA+ C V++ALW+VPP Sbjct: 10 SPEEFNADDFSQAAIALHVSSSGEYAGQRPHAHRKGQLILSMRGAVRCEVDDALWLVPPG 69 Query: 66 YAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQ 125 +AVW+PG + H ++T NA+ CFLFIEP A MP CCT+ ++PL REL+L LA + T Sbjct: 70 HAVWVPGEIPHRCRITKNADTCFLFIEPGAAAMPEICCTIAVTPLVRELVLYLAEQEHTY 129 Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185 + T RL VL + +P P + LHLPVS HPKIR M E + P + L QWA A Sbjct: 130 SPDSKTARLAAVLLEHIPDVPVEALHLPVSDHPKIRIMAEALFNEPDDRRTLKQWAAHLA 189 Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245 +SER+LARLI + TG+SF +WRQQL L++AL L +G VQ+VA TLGYDS +AFITMF+ Sbjct: 190 ISERSLARLIKEATGMSFGRWRQQLHLMIALSHLSEGQPVQRVAGTLGYDSVSAFITMFR 249 Query: 246 KGLGQTPGRYIARL 259 K LG++P +Y + L Sbjct: 250 KALGKSPTQYFSSL 263 >UniRef50_B6JB31 Transcriptional regulator, AraC-family n=5 Tax=Proteobacteria RepID=B6JB31_OLICO Length = 300 Score = 259 bits (662), Expect = 9e-68, Method: Composition-based stats. Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 2/260 (0%) Query: 5 LNLNGYEPDRHH-EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63 + D H VA D+ P+H H + QLI G IT T N W+VP Sbjct: 36 FGKSENREDYQHTSRVVAAMARDLPDKFVIPMHSHFRSQLIFGCSGVITVTTVNGTWVVP 95 Query: 64 PQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRT 122 AVW+PGGVEH + T + E+ ++++P A + +P CC + +SPL RELI+ Sbjct: 96 SLRAVWVPGGVEHEMRTTGSVEMRTIYVDPEAASHLPRECCVVAVSPLLRELIVAAVRIP 155 Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182 +++ ++ E+ P L LP+ ++ + + + P L ++ Sbjct: 156 NDFSDGSREEKIMSLILTEIHPDPVLPLDLPMPQDRRLLRVCQAILTDPGSNSTLAEFGQ 215 Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242 S+R L R+ ETG +F +WRQQ +L ++ L +G + +A LGY+S +AF Sbjct: 216 TVGASQRTLERMFPVETGTTFSKWRQQARLQCGIRMLAEGTPISTIALDLGYESPSAFSL 275 Query: 243 MFKKGLGQTPGRYIARLTTV 262 MF++ LG P Y + Sbjct: 276 MFRRALGVAPSEYFETIHAR 295 >UniRef50_A4JQ17 Transcriptional regulator, AraC family n=56 Tax=Proteobacteria RepID=A4JQ17_BURVG Length = 325 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 132/257 (51%), Positives = 170/257 (66%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 +PD AVA C+H PVH+H+KGQL+LALHGA+TC V A W+VPPQ VWI Sbjct: 46 DPDAIDRPAVAMCMHVDEHAPEIPVHKHQKGQLVLALHGAVTCRVAGAFWIVPPQCGVWI 105 Query: 71 PGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130 PG + HSN T NA LC+LF EP V +PT CCTL ISP+ RE+I+ LA Sbjct: 106 PGEMPHSNHATPNARLCYLFAEPGVVDLPTECCTLSISPMLREMIMHLAGAPLDYEQGGH 165 Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190 T RL +VL EL P ++L+LPV+ HP+IR M + + P + + QWA AMSER+ Sbjct: 166 TDRLARVLLHELTLMPVERLYLPVTDHPRIRQMADALNANPGDRSTVSQWAKRLAMSERS 225 Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250 LARL+V ETGL+F +WRQQLQL++A++ L G +VQ+V+ LGY+S TAFITMFKK LG Sbjct: 226 LARLVVSETGLTFGRWRQQLQLLVAVRELAGGASVQRVSDELGYESVTAFITMFKKALGH 285 Query: 251 TPGRYIARLTTVSPQSA 267 +PGRY A L ++ Sbjct: 286 SPGRYFAALARTQSEAG 302 >UniRef50_Q11DK3 Transcriptional regulator, AraC family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11DK3_MESSB Length = 262 Score = 256 bits (654), Expect = 7e-67, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 113/239 (47%) Query: 18 AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77 V P H H + QL +L G + E A +++PP A+WIP GV H Sbjct: 12 RPVVTLSDEYQAGYIDPFHSHERAQLSFSLSGVQSLITETATYVLPPNRAIWIPPGVRHK 71 Query: 78 NQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137 N ++I+P+ +P C ++S L R LI + +++++ Sbjct: 72 THCRENVRFYAVYIDPTLDNLPKECRVFEVSDLVRALIGEIMTFNFAYNEFGREGQIVRL 131 Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197 L DE+P+ P + +P+ + +I + M+ + P + + WA M R R+ K Sbjct: 132 LLDEIPRMPTVDIQIPMPTDSRILRVCNMLIEQPGDAHDIDYWASVANMGRRTFTRVFKK 191 Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 +TG++ WR Q++L+ AL L G ++ VA+ +GY+S +AF ++F + G P Y Sbjct: 192 QTGMALSTWRLQVRLMHALSLLHAGHSITSVAYGIGYESISAFTSVFHRSFGFPPSHYR 250 >UniRef50_Q391T4 Transcriptional regulator, AraC family n=8 Tax=Proteobacteria RepID=Q391T4_BURS3 Length = 288 Score = 256 bits (654), Expect = 7e-67, Method: Composition-based stats. Identities = 77/248 (31%), Positives = 118/248 (47%), Gaps = 3/248 (1%) Query: 13 DRHHEAAVAFCI-HAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 D H +A + A D H+H + QL+ G +LWM+PP A+WIP Sbjct: 36 DYQHAPGIAAVMPKAFPDGFVVAEHRHPRAQLVYTTTGIAEVIASQSLWMIPPHRALWIP 95 Query: 72 GGVEHSNQVTANAELCFLFIEPSA--VTMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129 + H+ + E+ +++P A P + +SPL RELI+ + + Sbjct: 96 PDLPHAMRAHGQLEMRTAYVDPRAYRSATPEQPSLVNVSPLLRELIVRASAFPVEVNPDG 155 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 +IQ++ E+ +Q L LP ++ + + + P + L +WA S R Sbjct: 156 RDDLVIQLMLAEIEWSAEQPLRLPSGQDRRLARVCDAILANPADQRTLTEWADEVGASSR 215 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 LARL ETGLSF QWRQQ ++ A L G +V VA LGY++T+AF T+F++ G Sbjct: 216 TLARLFTAETGLSFSQWRQQARISAARPLLASGRSVIAVAAELGYETTSAFSTVFRRFAG 275 Query: 250 QTPGRYIA 257 TP Y Sbjct: 276 MTPSAYAK 283 >UniRef50_C5CZV0 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZV0_VARPS Length = 292 Score = 255 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 121/259 (46%), Positives = 159/259 (61%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 HR +E D+ A I P HQH +GQL + L G +TC V ALWM Sbjct: 34 THRQGAWTFEFDKMEARVAAVRIRTEALAEGLPAHQHPQGQLAMVLRGTVTCEVPGALWM 93 Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANR 121 P +WIPGGV HS +V+A +CFLF+E +A MP TCC+L +SPL RELIL LA Sbjct: 94 APLHGGLWIPGGVPHSLRVSAEGNVCFLFVEDAAAAMPQTCCSLSVSPLLRELILYLAAL 153 Query: 122 TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWA 181 + EP RL VL D+L + P + +HLPVS P++R +++ + + P + QWA Sbjct: 154 PEGAQREPQALRLHAVLLDQLARMPTEAMHLPVSEEPRLRRLIDALMRDPADRTTAAQWA 213 Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241 AMSER L RL+ ETG+SF +W Q+L+LI+ALQ L G +VQ+VAH LGYDS +AFI Sbjct: 214 SRLAMSERTLTRLVQLETGMSFGRWSQRLRLIVALQWLTSGLSVQQVAHGLGYDSVSAFI 273 Query: 242 TMFKKGLGQTPGRYIARLT 260 MF+K +GQ P RY+AR Sbjct: 274 AMFRKAMGQPPARYLARRR 292 >UniRef50_Q4K821 Transcriptional regulator, AraC family n=22 Tax=Bacteria RepID=Q4K821_PSEF5 Length = 274 Score = 253 bits (647), Expect = 5e-66, Method: Composition-based stats. Identities = 81/262 (30%), Positives = 128/262 (48%), Gaps = 3/262 (1%) Query: 6 NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65 N++ + D+ +A D P H+HR+ QL+ G + + + W+VPPQ Sbjct: 14 NISIDQLDQTPRPVLAIGTDY-PDGQRLPRHRHRRAQLLYGATGVMQVSTDQGNWVVPPQ 72 Query: 66 YAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTT-CCTLKISPLCRELILTLANRTTT 124 AVWIP GVEH + L+IEP+A + ++ C + ISPL R+L+L + Sbjct: 73 RAVWIPPGVEHEVLMLG-VSTRSLYIEPAAAPLDSSGCRVIGISPLLRQLLLEAVDMPLE 131 Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184 + LI +L E+ + P LH+P+ + + + P + WA Sbjct: 132 YDLDGRDGLLINLLLHEIQRCPGLPLHIPLPAGGPLLELCRAFLARPDVHQSPLHWADRL 191 Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244 +S R R +ET +SF QWRQ+ +I AL L + V ++A LGYDS AF TMF Sbjct: 192 HVSLRTFNRWFRQETDMSFVQWRQRACVIQALARLAAAEPVTRIALDLGYDSPGAFSTMF 251 Query: 245 KKGLGQTPGRYIARLTTVSPQS 266 ++ LGQ+P Y+ + ++ Sbjct: 252 RRVLGQSPSTYLNQEHPAPGKA 273 >UniRef50_A5GBQ3 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=A5GBQ3_GEOUR Length = 278 Score = 253 bits (647), Expect = 5e-66, Method: Composition-based stats. Identities = 88/223 (39%), Positives = 121/223 (54%), Gaps = 1/223 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H +GQLI A G + +W+VPP AVW+P EH + L LF++PSA Sbjct: 49 HVHPRGQLIYASSGMMRVICSRDVWVVPPSQAVWVPPNQEHEVYFPGDTALRSLFVDPSA 108 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 VT +P C LK++PL RELIL + + R++QVL DEL L LP+ Sbjct: 109 VTGLPLQCTVLKVAPLLRELILRAVQIGNSYAPDGAEWRVMQVLLDELRIAEATPLRLPM 168 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 + ++ +++ + K P + L W S R LARL V ETGL+F WR++L L Sbjct: 169 ARDERVMRVIDALLKSPGDNRGLDAWGKIAGASSRTLARLFVSETGLTFGGWRKRLLLHK 228 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 AL L +G+ V +A LGY S +AFI MF+K LG +P RY Sbjct: 229 ALDRLDRGEQVTGIAFDLGYQSLSAFIEMFRKELGVSPRRYAR 271 >UniRef50_C3K8M6 Putative AraC-family regulatory protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K8M6_PSEFS Length = 265 Score = 253 bits (646), Expect = 6e-66, Method: Composition-based stats. Identities = 72/266 (27%), Positives = 124/266 (46%), Gaps = 6/266 (2%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 M + Y+PD + P H HR+GQ A GA+ + W Sbjct: 1 MPPTFTFSPYKPD---SPEAVVTLREYPSGTVFPRHTHRRGQFAYASTGALKMFTDLGNW 57 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT---MPTTCCTLKISPLCRELILT 117 +VPPQ A+W+PGGV H + + + +++ +A + C +SPL R L+ Sbjct: 58 VVPPQRAIWVPGGVSHEMHMRGDVVMLNTYLDDAAARRAGLQDYCQVFGVSPLLRHLLEA 117 Query: 118 LANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGAL 177 + ++ +L DE+ P+ L P+ S ++ + P + ++ Sbjct: 118 ALAIGPSASPSVRDCCVLTLLIDEIGTMPELPLSAPLPSESRLARSCQRFLDAPTQKISI 177 Query: 178 GQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDST 237 G+ A + +MS R R + TG++F WRQQ+ L+ A L G ++ VA LG+ S+ Sbjct: 178 GEMADWSSMSRRTFTRNFRECTGMTFVSWRQQVCLLEATARLSHGSSITDVAFELGFSSS 237 Query: 238 TAFITMFKKGLGQTPGRYIARLTTVS 263 +AF ++F++ LG +P RY+A+ S Sbjct: 238 SAFTSVFRRNLGDSPARYLAKSKAAS 263 >UniRef50_B8J3U2 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=B8J3U2_DESDA Length = 269 Score = 253 bits (646), Expect = 7e-66, Method: Composition-based stats. Identities = 119/263 (45%), Positives = 155/263 (58%), Gaps = 1/263 (0%) Query: 7 LNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQY 66 L + PD+ A + +E P HQH GQL+L L G+ C V LW+VPPQ Sbjct: 7 LAAFSPDQWDIPVTARKVDVVRNEYEMPTHQHTAGQLLLTLRGSTACRVFEDLWLVPPQC 66 Query: 67 AVWIPGGVEHSNQVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQ 125 AVW+P H N++TA + +C LFI + + P TCCTL ISPL RELI +A Sbjct: 67 AVWVPPNTPHCNRITARSSVCLLFIRQEHIRLLPATCCTLSISPLVRELIRHVAALPPED 126 Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185 RLIQVL DEL + P L LPVSS +++++ E + + P E L WA Sbjct: 127 MLAERGERLIQVLLDELSRMPATGLRLPVSSDIRLQSIAESITEAPAERKDLSAWARHIG 186 Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245 MS R+LARL+V+ETGLSF +WRQQL L+MA+Q L G +VQ+ A LGY+S TAFITMFK Sbjct: 187 MSRRSLARLVVRETGLSFGRWRQQLLLVMAIQMLSDGISVQQTAWDLGYESVTAFITMFK 246 Query: 246 KGLGQTPGRYIARLTTVSPQSAK 268 K LG +P +Y+ R +S Sbjct: 247 KALGASPAKYVQRYFATGTESGS 269 >UniRef50_D2M677 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M677_RHOPA Length = 294 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 96/240 (40%), Positives = 150/240 (62%), Gaps = 2/240 (0%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 H+H K QL+ G I C VE+ +W+VPPQ A+WIPGG+ H+ + E LF+ P Sbjct: 37 RHRHDKAQLLYCARGVINCEVEDGVWIVPPQCAIWIPGGLPHAAFGSGEVECICLFVAPD 96 Query: 95 AVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153 A +P TCCT+ IS L R L++ + + R++ V+ DEL + P +QL LP Sbjct: 97 AAAGLPVTCCTIAISDLLRHLLIRASELPERYDVDGPDGRIVAVILDELAKAPVEQLCLP 156 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 + S P+++ + E++ P + + +WAG A+SER+L+R+++ E G+SF WR+QL +I Sbjct: 157 IPSDPRLKQLAELLVSSPADHATVAEWAGRVALSERSLSRMLMDEIGMSFGHWRRQLHVI 216 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI-ARLTTVSPQSAKPDPR 272 +AL+ L G+TVQ VA LGY+S ++F+TMF+K +G+ P RY+ R T+V + P P+ Sbjct: 217 LALRRLSAGETVQTVALDLGYESASSFVTMFRKMVGKPPIRYLVERQTSVPLSRSDPPPK 276 >UniRef50_Q0B9P3 Transcriptional regulator, AraC family n=14 Tax=Proteobacteria RepID=Q0B9P3_BURCM Length = 322 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 76/253 (30%), Positives = 117/253 (46%), Gaps = 3/253 (1%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 +P H +V + T P H H +GQ A G I+ + + W+VPPQ A W+ Sbjct: 70 DPYDHIPRSVVVTANDYPAGTTFPEHAHGRGQFAFASRGTISVSTPHGRWLVPPQRACWV 129 Query: 71 PGGVEHSNQVTANAELCFLFIEPSAVT---MPTTCCTLKISPLCRELILTLANRTTTQRA 127 P GV H +T + F+ A +P C +SPL R+LI Sbjct: 130 PPGVRHEMTMTGAVTMLNTFVSDDAARAAGLPDQCGVYGVSPLLRQLIDDAIELPAMYDV 189 Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187 + +L+ +L E+ P+ LH P+ + ++ ++ + P L Q A +S Sbjct: 190 DGRAGKLMALLVAEIATMPRLSLHAPLPADARLASICRHLFASPSIAADLDQVATHAGVS 249 Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247 R RL +TG+SF WRQQ+ ++ A+ L G V +VA LGY S +AF + F++ Sbjct: 250 RRTFTRLFRAQTGVSFAAWRQQVCMLAAITRLSDGQPVTRVAFELGYASASAFTSAFRRI 309 Query: 248 LGQTPGRYIARLT 260 LG TP RY+ Sbjct: 310 LGDTPSRYLEARR 322 >UniRef50_Q47EU9 Transcriptional regulator, AraC family n=4 Tax=Bacteria RepID=Q47EU9_DECAR Length = 273 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 78/254 (30%), Positives = 116/254 (45%), Gaps = 2/254 (0%) Query: 19 AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78 + + E+ P H+H QL L G I + W+VP AVWIP +EH Sbjct: 20 PMTVNLRCPPAEVYVPPHRHDWAQLAYPLRGGIRISAAGMTWLVPALRAVWIPPHIEHDL 79 Query: 79 QVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTT-QRAEPMTRRLIQ 136 + E ++I P +P C +++S L R L L+ Q R++ Sbjct: 80 LMLGEVEFRTVYIAPEVAPLPLDACSVIEVSDLMRALFEALSEADGDGQEPSLRQRQVTA 139 Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196 +L E+ + P L LP+ +++ + + + P +L +WA SER LARL V Sbjct: 140 LLLTEIRRAPPLSLGLPMPHDRRLQALCQALIDEPASPLSLAEWAARVGASERTLARLFV 199 Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 E LSF WRQQL+L AL + +G +VA LGY S AF MFK+ G PGR++ Sbjct: 200 SELKLSFGAWRQQLRLARALDLIGRGRPCGEVAAELGYASPAAFSAMFKRAFGVPPGRFM 259 Query: 257 ARLTTVSPQSAKPD 270 + + D Sbjct: 260 QERSPLPAGEPHND 273 >UniRef50_Q4K9E0 Transcriptional regulator, AraC family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4K9E0_PSEF5 Length = 271 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 105/260 (40%), Positives = 145/260 (55%), Gaps = 1/260 (0%) Query: 4 RLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63 +PD A I P H HRK QL+ L G ++C LW+ P Sbjct: 5 NEQDQPQDPDAIARPVCALRISTQEQRWERPWHSHRKAQLLFPLSGVLSCESAEGLWLAP 64 Query: 64 PQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRT 122 PQ AVWIP +H Q NA LF+EP +P CCTL +SPL +EL+ A Sbjct: 65 PQCAVWIPSATDHRVQGLENALGYCLFVEPEHARSLPQACCTLAVSPLLQELLQRCAQLP 124 Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182 + RL+ V DEL P++Q+HLP+ H ++R + + + P +LGQWA Sbjct: 125 YLYDQQGAEGRLMAVALDELAAAPREQIHLPMPRHEQLRRLAGQILEQPERRLSLGQWAE 184 Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242 +SER+L+RLIV ETGLSF +W++QL +++ L+ L +GD+V++VA TLGYDS +AFI Sbjct: 185 QIGLSERSLSRLIVAETGLSFGRWQRQLHILLGLKQLGRGDSVERVALTLGYDSASAFIR 244 Query: 243 MFKKGLGQTPGRYIARLTTV 262 MFKK +GQ PGR+ A Sbjct: 245 MFKKAVGQPPGRFFAERRQA 264 >UniRef50_A6W2J3 Transcriptional regulator, AraC family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W2J3_MARMS Length = 267 Score = 250 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 135/266 (50%), Gaps = 5/266 (1%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDE---LTSPVHQHRKGQLILALHGAITCTVENA 58 M ++ + D ++ V + E + +H+H GQL+ +L G ++ E+ Sbjct: 1 MAKMKKSLLLADIIDQSDVDLILSVELIENQIRETELHRHAFGQLVGSLEGLLSVQTESG 60 Query: 59 LWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILT 117 W+VP + VWIP H + ++++P + ++ T + +PL +EL+ Sbjct: 61 WWVVPATHTVWIPPNTLHGAKSHGPFRGWSVYLDPKRSQLLDSSPKTFQTTPLLKELVHR 120 Query: 118 LANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGAL 177 A+ + ++ + RL +VLFDE+ P+ L P ++ M + + + +L Sbjct: 121 AASWS-DDTSQAVKSRLSEVLFDEIVNLPETLFGLLQPGLPSLKKMTDGLLSNLADNRSL 179 Query: 178 GQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDST 237 +WA +S R LAR ++TGL F +WRQ+ +++ A++ L V +A TLGY++ Sbjct: 180 EEWARSIGLSSRTLARRFNEQTGLGFSEWRQRARVLSAIEMLADNVPVTNIAFTLGYENV 239 Query: 238 TAFITMFKKGLGQTPGRYIARLTTVS 263 +AFI MF++ +G TPG+YI R S Sbjct: 240 SAFIAMFRRVMGVTPGQYIQRHNKES 265 >UniRef50_Q14GY1 Transcriptional regulator araC family protein n=19 Tax=Francisella RepID=Q14GY1_FRAT1 Length = 282 Score = 250 bits (638), Expect = 6e-65, Method: Composition-based stats. Identities = 71/231 (30%), Positives = 113/231 (48%), Gaps = 1/231 (0%) Query: 31 LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLF 90 S H HR+G++ G + + N W++P A WIP H +++ E +F Sbjct: 43 QESDWHHHRRGKIFCIESGLVHVSTPNGSWVLPSNRAGWIPPNTSHKIRISGIVEGWVIF 102 Query: 91 IEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ 149 I P+ +P + + +S + R L L + +++ +E+ P++ Sbjct: 103 IHPNMCDDLPKSSRVIPMSEVLRALALRATEWDKYNNLSLEQEHIAKIICNEIRLAPEEA 162 Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209 LHLP+ ++ + + P +L QWA F AMS R L R + ETGLSF +WRQQ Sbjct: 163 LHLPMPKTDRVIKVANAIIDNPSISKSLEQWAAFAAMSPRTLRRAFLSETGLSFSRWRQQ 222 Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260 QL L L K +V +V+ +LGY S + FI MF+K G+TP +Y + Sbjct: 223 AQLARGLDMLAKDISVTEVSDSLGYASPSNFIAMFRKAFGKTPKQYFSSER 273 >UniRef50_B0VLM5 Putative transcriptional regulator (AraC family) n=1 Tax=Acinetobacter baumannii SDF RepID=B0VLM5_ACIBS Length = 275 Score = 249 bits (637), Expect = 6e-65, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 4/259 (1%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 M ++N ++ H A + +HQH +GQLI A G + + E LW+ Sbjct: 8 MIEKSINPHDYQHIHSPASVMPKNYHAK-HRIDLHQHERGQLIYATSGIMELSTEEELWL 66 Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFIEP--SAVTMPTTCCTLKISPLCRELILTLA 119 +PP++ VWIP H + L L+I+ + P C + +S L EL++ A Sbjct: 67 IPPRFGVWIPAYTPHQMTTKTDVHLNTLYIDTYRWSKPFPDKPCGVTVSGLLHELLIRAA 126 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVS-SHPKIRTMVEMMAKGPVEWGALG 178 + + + + +L +EL L P +++ + ++ P + +L Sbjct: 127 SFPIEYPLHSVEWKTMDLLVEELKWTKGISLMTPEPYMDKRLQDLCNILIINPADNHSLE 186 Query: 179 QWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTT 238 +W+ + R L+RL +E +F WRQQL+++ A+ L+ G + ++ LGY S + Sbjct: 187 EWSSQVGATTRTLSRLFKQEMNTTFTLWRQQLRIVHAIPSLMAGKPISDISQELGYSSQS 246 Query: 239 AFITMFKKGLGQTPGRYIA 257 F MFKK +G+TP YIA Sbjct: 247 TFTVMFKKIMGKTPTEYIA 265 >UniRef50_Q39GD4 Transcriptional regulator, AraC family n=7 Tax=Betaproteobacteria RepID=Q39GD4_BURS3 Length = 278 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 74/239 (30%), Positives = 112/239 (46%), Gaps = 1/239 (0%) Query: 25 HAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANA 84 H H +GQ+ G + W++PP A WIP G +H ++ Sbjct: 40 TYRLGTREVDWHSHLRGQVFCVESGFAHVRTPHGSWLLPPHRAGWIPPGEQHKVSISGAL 99 Query: 85 ELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELP 143 + I P+A MP C + I+ L R L+ + R + R+ VL DE+ Sbjct: 100 SGWSVVIAPAASRRMPDQPCVIAITELMRALVRRAVSWADQDRLDIEQARISIVLLDEMR 159 Query: 144 QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203 + P + LHLP+ ++ + + P + L WA + +S R L+RL V ETG SF Sbjct: 160 RAPHEPLHLPMPRDRRLLRIANAILGQPHDSRTLEAWAEWAGLSARTLSRLFVAETGTSF 219 Query: 204 RQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262 QWRQQ +L AL+ L GD+V +A LGY + + FI MF++ G +P Y A+ Sbjct: 220 AQWRQQARLTHALERLASGDSVANIADALGYATPSNFIAMFRRAFGDSPAHYFAKRKQP 278 >UniRef50_A6W3J4 Helix-turn-helix-domain containing protein AraC type n=9 Tax=Gammaproteobacteria RepID=A6W3J4_MARMS Length = 273 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 97/245 (39%), Positives = 147/245 (60%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 D + + + +P H H+KGQL+L L G +T +++ +W+VPP+ AVWIP Sbjct: 22 ADHYPHRVLVLRSQSVPHSEETPWHHHQKGQLVLPLTGVVTSFIDDKMWLVPPRCAVWIP 81 Query: 72 GGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131 V H NQ++ NA++C LF++ + + +P CTL I+P RELIL L + ++ +P T Sbjct: 82 SNVMHRNQISPNADVCMLFVDSTNLALPEITCTLTITPFVRELILHLHTQQDYEKTDPAT 141 Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191 RL+ VL D+L Q +++ P+ P + + + P E LG+WA FAMSER L Sbjct: 142 GRLVDVLLDQLIQLEREEFDFPIPDEPTLNRLALELIARPNEKRTLGEWASDFAMSERTL 201 Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251 AR+I + L+F QWR QL +++ALQ L +Q ++ LGYDS +AFIT FKK LG++ Sbjct: 202 ARMIKRHVQLTFGQWRSQLHIVLALQKLAINLPIQTISEELGYDSVSAFITFFKKALGKS 261 Query: 252 PGRYI 256 P +Y Sbjct: 262 PRQYR 266 >UniRef50_D1RUP3 Transcriptional regulatory protein n=2 Tax=Enterobacteriaceae RepID=D1RUP3_SEROD Length = 285 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 4/247 (1%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 + D + +A P+H HR+ QL+ G + W+VPPQ AVW+ Sbjct: 32 DIDHVPRSVIAIGTDY-PSGHLLPMHSHRRAQLLYGATGVMHVFTHQGNWIVPPQRAVWL 90 Query: 71 PGGVEHSNQVTANAELCFLFIEPSA--VTMPTTCCTLKISPLCRELILTLANRTTTQRAE 128 P + H ++ L+IEP+A + P C + ++PL R+L++ + + Sbjct: 91 PPQMPHEVRMVG-VTTRSLYIEPTALLASQPQVCQVVSVTPLMRQLLMAAVDMPLEYDPD 149 Query: 129 PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSE 188 L+ +L EL Q LH+P+ + ++ + ++ P + +WA MS Sbjct: 150 GRDGALVFLLLHELAQLQSLPLHIPLPADRRLGELCQLFLLQPNAHDSPQEWATRLYMSI 209 Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGL 248 R +R +TG+SF QWRQ+ +++AL L +G++V +VA LGY+S+ AF TMF++ L Sbjct: 210 RTFSRFFRAQTGMSFSQWRQRACVVLALAQLTEGNSVTQVALELGYESSAAFATMFRRVL 269 Query: 249 GQTPGRY 255 GQ P Y Sbjct: 270 GQAPSCY 276 >UniRef50_A3QGH9 Transcriptional regulator, AraC family n=1 Tax=Shewanella loihica PV-4 RepID=A3QGH9_SHELP Length = 262 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 2/261 (0%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 MMHR + +D H H QLI A G + + E + W Sbjct: 1 MMHRQEIEHIPVFGSPSQLFKPVAREYSDGQLLAPHWHHAAQLIYAESGVMELSCEESFW 60 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT--MPTTCCTLKISPLCRELILTL 118 ++ PQ A+W+P + H + L ++ +P A+ +L +SPL REL+ + Sbjct: 61 IISPQQALWMPAELPHRLKARGQVSLRSVYFQPDALPERFSKQPQSLVVSPLLRELMKSA 120 Query: 119 ANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALG 178 T++ + L+Q+L E+ + L LP+ +++ + + P L Sbjct: 121 MPVTSSSQPSSREVHLMQLLMSEIGWAQEIPLKLPMPKDNRLQKICLGLLADPGNDCTLS 180 Query: 179 QWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTT 238 QW S R L+RL + G SF WRQQ ++ A+ L G+ + +VA +GYDS Sbjct: 181 QWGEIVGASPRTLSRLFQTQLGTSFAIWRQQARIFAAIPRLNLGEPIVRVAMEMGYDSAG 240 Query: 239 AFITMFKKGLGQTPGRYIARL 259 AF + FKK +G TP + ++ Sbjct: 241 AFASAFKKMMGVTPSEFRTQV 261 >UniRef50_Q7W072 Probable transcriptional regulator n=3 Tax=Bordetella RepID=Q7W072_BORPE Length = 286 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 74/248 (29%), Positives = 123/248 (49%), Gaps = 2/248 (0%) Query: 20 VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79 +A S +H+H +GQL+ A+ G +T + W+V P A+WI GV H + Sbjct: 39 MAALATDYPAGTVSSLHRHDRGQLLYAMSGVVTVITDLGSWVVAPGQALWIAPGVLHQTR 98 Query: 80 VTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL 138 + + L+I+P+ +P C T+++SPL + LIL + ++ Sbjct: 99 GFESVAIRSLYIDPAHADGLPAACQTIQVSPLLQALILEAVKLPPQDAGSERAGHIRALI 158 Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198 DE+ L++P+ ++ + + + + P G+L WA + +S RNL RL + Sbjct: 159 LDEMRHVCAAPLYVPMPRDARLARICQALLRDPANAGSLDAWAAYGGLSRRNLTRLFRAQ 218 Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 TG SF WRQ++ L+ AL L +G+ + VA LGY S AF MF++ LG +P Y R Sbjct: 219 TGASFNAWRQKVLLMEALARLSRGEQITAVALDLGYGSPGAFTAMFRRALGVSPREYF-R 277 Query: 259 LTTVSPQS 266 T ++ Sbjct: 278 WTEAPQRA 285 >UniRef50_A0AX10 Transcriptional regulator, AraC family n=6 Tax=Burkholderia RepID=A0AX10_BURCH Length = 277 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 74/241 (30%), Positives = 120/241 (49%), Gaps = 1/241 (0%) Query: 20 VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79 +A + P H HR+GQLI A+ G + + W+VP AVW+PGG +H + Sbjct: 37 IAVVASDSPAGMAYPPHSHRQGQLIHAISGVMIVHADAGSWVVPTGRAVWVPGGTQHEIR 96 Query: 80 VTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL 138 + ++ +F+ P ++PT C +++ L RELI+T + R++ ++ Sbjct: 97 SAGDVQMRTVFVGPEVRPSLPTECRVIEVGTLLRELIVTACDLPADYDLSHRAGRVLALI 156 Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198 DE+ P LH+P+ HP + + + P L WA M+ER LAR +E Sbjct: 157 LDEIEIAPSLSLHVPMPRHPALVALCTRLINDPSSVVTLQAWARDAHMNERTLARAFKRE 216 Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 TG++ W + +L+++L L G + ++A GYDS +AF MF+K LG P Y R Sbjct: 217 TGMTHGAWCRHARLLLSLPRLAAGTPILELALEHGYDSPSAFAAMFRKALGVAPSEYFRR 276 Query: 259 L 259 Sbjct: 277 R 277 >UniRef50_A8I0S5 Transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I0S5_AZOC5 Length = 272 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 95/245 (38%), Positives = 145/245 (59%), Gaps = 2/245 (0%) Query: 13 DRHHEAAVAFCIHAGTDELT-SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 D A V A + L SP H H+K QL+ + G I C VE+A+W+VPPQ AVWIP Sbjct: 14 DEVPRALVTANAVASLESLEQSPRHHHQKAQLLFTVRGVINCEVEDAVWIVPPQCAVWIP 73 Query: 72 GGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130 GGV H+ + E LFIEP A +P CCT+ +S L R L++ + Sbjct: 74 GGVPHTVFGSGEVECISLFIEPPATPELPNACCTITVSSLLRHLLMRANELPELYDVDGP 133 Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190 R++ V+FDEL P + L LP+ +++ + +++ P + + +WA A+SER+ Sbjct: 134 DGRIVSVIFDELAAAPVEDLRLPIPGDVRLKKLTDLLIAAPADHATVAEWASRIALSERS 193 Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250 L R++ ++ G+SF +WR+QL +++AL+ L G TVQ VA LGY+S ++F+TMF+K +G+ Sbjct: 194 LNRMLAEQVGMSFGRWRRQLHVVLALRRLSAGQTVQAVAMDLGYESASSFVTMFRKMVGK 253 Query: 251 TPGRY 255 P RY Sbjct: 254 PPSRY 258 >UniRef50_B4SJK4 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria RepID=B4SJK4_STRM5 Length = 282 Score = 246 bits (628), Expect = 7e-64, Method: Composition-based stats. Identities = 103/268 (38%), Positives = 138/268 (51%), Gaps = 1/268 (0%) Query: 6 NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65 + PDR + + D P H HRK QL++A G I LW+VPPQ Sbjct: 10 EVGPDYPDRVDLPVMVLGLDPIPDAWQMPFHAHRKAQLLVATRGLIMLETAAGLWVVPPQ 69 Query: 66 YAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTT 124 A+WIPGG+ H + +F+EP V +PT C + I+P + L+ + Sbjct: 70 GAIWIPGGLSHRASSSGRPHGFVVFVEPGVVPGLPTHCAAMAITPFMQALLERASALPGH 129 Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184 RL+ V DEL P + LHLP+ S ++R + M P E L WA Sbjct: 130 YEPGSAQDRLMAVFLDELIAAPPEWLHLPMPSDARLRRLANAMLDTPAERATLEVWASRI 189 Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244 MSERN++RL ETGLS R+WR+QL +++AL L KG TVQ VA LGYDS AF+TMF Sbjct: 190 GMSERNMSRLFSGETGLSVRRWRRQLHVVVALPLLAKGRTVQAVADHLGYDSAGAFVTMF 249 Query: 245 KKGLGQTPGRYIARLTTVSPQSAKPDPR 272 +K +G P R++A T P S D R Sbjct: 250 RKTVGAPPKRFLAERGTRQPVSDADDQR 277 >UniRef50_A1K8N6 Putative AraC-family transcriptional regulator n=1 Tax=Azoarcus sp. BH72 RepID=A1K8N6_AZOSB Length = 261 Score = 246 bits (628), Expect = 8e-64, Method: Composition-based stats. Identities = 75/246 (30%), Positives = 114/246 (46%), Gaps = 4/246 (1%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 P + ++ + + P H H GQL + GA+ V + W+VPP A+W+ Sbjct: 11 RPQPTTQDPISVLVREPPPDSIIPWHSHPWGQLAYPVSGAVCMDVPGSRWLVPPFRALWV 70 Query: 71 PGGVEHSNQVTANAELCFLFIEPSAVTMPT-TCCTLKISPLCRELILTLANRTTTQRAEP 129 P GVEH + + L + + +P C L+I+PL RELI L R Sbjct: 71 PPGVEHQQSMLGHVRLRVVHVAEGCAALPESHCAVLEITPLLRELIEALLPRPP---QSE 127 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 ++ +L EL Q L LP S ++ + E + P + L +WA S R Sbjct: 128 RRTQIQALLLTELSQARTLNLRLPQPSDRRLAALCEALMADPADNAPLTEWARRVGASGR 187 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 LARL E G+SF WRQQ++L A + +G ++A LGY S +AF MF++ G Sbjct: 188 TLARLFQSEMGMSFGLWRQQVRLTHATVLVAQGRPYAEIAAELGYASPSAFSAMFRRAFG 247 Query: 250 QTPGRY 255 +P + Sbjct: 248 CSPRAF 253 >UniRef50_Q2BLH8 Transcriptional Regulator, AraC family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLH8_9GAMM Length = 260 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 85/230 (36%), Positives = 127/230 (55%), Gaps = 1/230 (0%) Query: 32 TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91 H+H +GQL A G I + +W+VPP AVW+PG V H +AEL LF+ Sbjct: 31 DMDPHRHPRGQLAYAAEGIIRVYTDEGVWVVPPSQAVWVPGDVVHRTTAEVSAELRHLFV 90 Query: 92 EPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150 +P+ + C +++SPL RELI+ +A+ RL V+ DEL L Sbjct: 91 DPAYLSGLSDQCSVVEVSPLLRELIMRVADFGDDYSTNSPASRLCAVILDELQNLKPSLL 150 Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210 HLP ++ +++ ++ M + P L WA SER ++RL VKETG++F+QWR+QL Sbjct: 151 HLPGATDRRLQRVMHAMVENPSAEIGLNYWAEQVGASERTISRLFVKETGMNFQQWRKQL 210 Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260 L A+ L K + V +A LGY S +AF+ MF++ LG+ PG+Y L+ Sbjct: 211 LLQEAVDRLGKRNAVVDIALELGYRSPSAFVAMFRQALGKPPGQYFKDLS 260 >UniRef50_A9FA95 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=A9FA95_SORC5 Length = 277 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 104/247 (42%), Positives = 148/247 (59%), Gaps = 1/247 (0%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 A A + T L S H HR+ QL G +TC NALW+VPP+ A+WIP GV H Sbjct: 22 RPANAVGLSMLTGGLESEFHSHRESQLFFLERGEVTCEASNALWIVPPRSALWIPAGVLH 81 Query: 77 SNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135 + A E +F+EP +P CC + ++PL REL++ LA R + RL+ Sbjct: 82 KIRGRAPLEGYGVFMEPDVAPSLPAECCAVSVTPLFRELLVRLAARPALYDLDGPDARLV 141 Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 VLFDEL ++ LP+ + P++R +V+ MA+ P + +G WA + ER L RL+ Sbjct: 142 AVLFDELAAATIEKHRLPMPADPRLRKLVDAMAENPADGATMGSWARRIGVGERTLNRLL 201 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 V+ETGLSF +WRQQL +++ALQ L +G +VQ VA LGY+S ++F+TMF+K LG +P RY Sbjct: 202 VRETGLSFGRWRQQLHIVLALQRLSRGASVQSVASDLGYESASSFVTMFRKALGASPARY 261 Query: 256 IARLTTV 262 +AR Sbjct: 262 MARRLGR 268 >UniRef50_A9HXG4 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria RepID=A9HXG4_BORPD Length = 284 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 112/245 (45%), Gaps = 2/245 (0%) Query: 13 DRHHEAAVAFCIH-AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 D H + + T+ H H +GQL+ A+ G + + + W +P A+W+P Sbjct: 35 DYQHVPRLVTALAKDFVPSETTGPHSHPRGQLVYAIEGVMRVSTPDGFWTLPSLRALWVP 94 Query: 72 GGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130 G H Q+ + L++ +A ++ C +++S L RELIL L E Sbjct: 95 PGTVHGIQMVGKVSMRTLYVHANAANSLWDRCQVVEVSGLLRELILALTAEPIEYALEGR 154 Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190 ++ +L EL P + +P +++T+ + P + W S R Sbjct: 155 GGQIATLLLTELKAAPVIPIRIPWPQDRRLQTVCRAILAQPGLARTVDDWGDEVGASGRT 214 Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250 L RL E GL++RQW QQ++L AL L G V +VA LGY S +AF MF++ LG Sbjct: 215 LIRLFQAEVGLNYRQWVQQVRLAEALHRLSLGQPVARVAAELGYRSPSAFSAMFRRALGS 274 Query: 251 TPGRY 255 P Y Sbjct: 275 PPQAY 279 >UniRef50_Q47Y50 Transcriptional regulator, araC family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y50_COLP3 Length = 268 Score = 243 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 64/243 (26%), Positives = 115/243 (47%), Gaps = 2/243 (0%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 + + + H H QL + G + + ++++PP+ A+W+P G+ Sbjct: 26 PRSVLPLSAEFKPMTQITS-HSHPWSQLSYSCVGVMHIETDAGIFVIPPEQALWLPPGMA 84 Query: 76 HSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134 H + L+ +P + L + PL + LIL ++N + T+R Sbjct: 85 HQHFCKNKVSYRSLYFDPVLSEMLGDKVRPLTVDPLLKSLILEISNWSEDYEETEETQRF 144 Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 + VL D L +L +P ++ ++E + + P + QWA S R L RL Sbjct: 145 LLVLLDRLAIAKSNELFMPTIQDKRLFPIIETLNQEPANKLTIEQWALKVGASSRTLNRL 204 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 + G+ F +W+Q+L+++ +L+ L + +A LGY+ST+AFIT FKK LG +P + Sbjct: 205 FNQNYGMGFSRWKQKLRILKSLELLNSNARLVDIAFELGYESTSAFITAFKKQLGCSPKK 264 Query: 255 YIA 257 Y+A Sbjct: 265 YLA 267 >UniRef50_B4SSQ8 Transcriptional regulator, AraC family n=3 Tax=Stenotrophomonas RepID=B4SSQ8_STRM5 Length = 265 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 120/242 (49%), Gaps = 1/242 (0%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 + V H+HR+ QL+ A G + E W+VP A+W+P G+ H Sbjct: 24 QRPVTCRARHYQAGTHISPHKHRRHQLVYAQSGLMVVRSEVGRWVVPSTRAIWVPAGIAH 83 Query: 77 SNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135 + A + L++EP +P ++++PL REL+L + + R++ Sbjct: 84 AVDCIAEVHMRSLYVEPEFAPHLPAEAFAIQVAPLLRELLLAASLIEGAHEDDSRDGRVV 143 Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 ++L DEL + LHLP S P++ + + K P + L WA + + + R Sbjct: 144 RLLLDELRRMDALPLHLPEPSDPRLLKICLHIQKHPADDATLQDWAQALQVDVKTIQRHF 203 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 E G++F QWRQQ +L+ A++ L GD V VA +GYDS +AF +MFK+ LGQTP + Sbjct: 204 TSELGMTFGQWRQQARLLAAMERLAVGDKVIDVALAMGYDSPSAFTSMFKRQLGQTPAAF 263 Query: 256 IA 257 Sbjct: 264 FR 265 >UniRef50_Q221Z0 Transcriptional regulator, AraC family n=9 Tax=Proteobacteria RepID=Q221Z0_RHOFD Length = 273 Score = 242 bits (619), Expect = 9e-63, Method: Composition-based stats. Identities = 77/242 (31%), Positives = 122/242 (50%), Gaps = 1/242 (0%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 A + F E P H+H G+ + + G + + + ++ PPQY +W+P VEH Sbjct: 21 PAPIVFRSAYVPAEGMYPQHRHAWGEFVYSFSGVMEVKLADHHYLAPPQYGIWLPPDVEH 80 Query: 77 SNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135 A C L+I P +P C L +SPL R L+ L + Q RL+ Sbjct: 81 VGLNRYEAVHCSLYIAPQGCGNLPRAACALTVSPLVRALLEHLRQQPPEQPGTLQDERLL 140 Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 +VL D+L P +LP S + ++ M+ + P + +L + A +ER L R Sbjct: 141 RVLVDQLALAPCAGSYLPSSDDALLGAVLRMLEEQPGDNRSLPELAHAVHTTERTLMRRA 200 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 ++ G+SF +WRQ+L+++ A+ L G TV+ +A LGY S +AFITMFK+ +G TP + Sbjct: 201 RRDLGMSFVEWRQRLRVVKAMPLLEAGQTVETIALDLGYGSASAFITMFKRLVGTTPDEF 260 Query: 256 IA 257 Sbjct: 261 RK 262 >UniRef50_C1DH76 Transcriptional regulator, AraC-family n=3 Tax=Proteobacteria RepID=C1DH76_AZOVD Length = 296 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 80/255 (31%), Positives = 121/255 (47%), Gaps = 3/255 (1%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 +PDR VA P H HR+GQL+ G + W +PP A W+ Sbjct: 29 DPDRSSLPVVAERY-GYPKGQRIPEHSHRRGQLMFVTSGGLRVQTRRGYWTIPPGRACWV 87 Query: 71 PGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEP 129 P G+ H + AEL ++ +P+ C L + L REL++ + + Sbjct: 88 PCGLNHIAEYPQAAELAVAYVRTDLCEMLPSDCRVLNLGALLRELVIAAYDFGWDYGIDS 147 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 R + VL E+ +Q L +P ++R + + + P + +L +WA S R Sbjct: 148 HEARAMLVLIGEIGRQSSAPLFIPEGRDNRLRRVTAFLHRHPDDKRSLEEWASQVGASAR 207 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 LARL ETGLSF QWRQQL L A++ L++G +V +VA+ LGY S +F MF + +G Sbjct: 208 TLARLFRSETGLSFSQWRQQLHLTRAVEMLLEGASVTQVAYALGYASPGSFSAMFARSMG 267 Query: 250 QTPGRY-IARLTTVS 263 + P Y AR + Sbjct: 268 EPPSLYCRARHGALG 282 >UniRef50_Q13ID0 Transcriptional regulator, AraC family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13ID0_BURXL Length = 263 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 82/252 (32%), Positives = 120/252 (47%), Gaps = 7/252 (2%) Query: 9 GYEPDRHHEA----AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPP 64 + PD V + H+H QL L G++ T E +W V Sbjct: 5 HFNPDGRRSPTEFEPVTVHHRKPPLDGIISSHRHNWSQLTCPLKGSMRVTTERQVWTVTS 64 Query: 65 QYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPT-TCCTLKISPLCRELILTLANRTT 123 AVWIP GV+H + E +FI+P +P CC + +SPL REL+ L Sbjct: 65 FRAVWIPPGVDHELTMVGATEFHAVFIDPQHSPLPANQCCVVDVSPLMRELMQWLGADYG 124 Query: 124 TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183 A +RRL VL +E+ + ++ L + +++++ E + + P LG+WA Sbjct: 125 --PATDHSRRLTDVLLEEVRRATRRTSALVLPGDRRLKSLCEALMEDPGSTLTLGEWAHR 182 Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITM 243 SER LARL E G +F WRQQL+L A+ L G ++ ++A LGY + AF TM Sbjct: 183 TGASERTLARLFQIELGTTFGAWRQQLRLSCAVDLLRSGLSLSRIAADLGYADSAAFSTM 242 Query: 244 FKKGLGQTPGRY 255 FK+ G P RY Sbjct: 243 FKRAFGVAPSRY 254 >UniRef50_B0UH11 Transcriptional regulator, AraC family n=3 Tax=Rhizobiales RepID=B0UH11_METS4 Length = 287 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 77/233 (33%), Positives = 119/233 (51%), Gaps = 2/233 (0%) Query: 26 AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85 P H H++ QLI A G + T + LW++PPQ AVW+P G+ H+ + + Sbjct: 36 EFPSGFHVPSHVHKRAQLIYATAGVMEVTTADGLWLLPPQRAVWMPAGIAHAMRARCDVS 95 Query: 86 LCFLFIEPSAVT--MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELP 143 L L+I A P T ++++S L RELIL +A + RR++ +L E+ Sbjct: 96 LRTLYIAQEACPASFPETPRSVRVSVLLRELILRVARMPLEREPTEHERRVLDLLLYEIT 155 Query: 144 QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203 + L+LP+ ++ + + + P + LG WA S R LARL +E G SF Sbjct: 156 WEADGVLYLPMPKDKRLAGLCQALIDDPGDGRDLGDWARQAGASSRTLARLFKREFGSSF 215 Query: 204 RQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 WR+QL+ + AL L G+ + VA LGY++ AF MF+ +G+ P RY Sbjct: 216 LVWRKQLRALCALPRLAAGEPISVVAIDLGYETPGAFAAMFRGVMGERPSRYF 268 >UniRef50_D1SXH7 Transcriptional regulator, AraC family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SXH7_9BURK Length = 269 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 2/266 (0%) Query: 4 RLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63 + + + H HR+GQLI G ++ + W++P Sbjct: 2 SDTAAWIDLHDDDTGPLVVGRAGTQVNHDTAPHSHRRGQLIGCRRGVLSVGADTGHWVIP 61 Query: 64 PQYAVWIPGGVEHSNQVTANAELCFLFIE-PSAVTMPTTCCTLKISPLCRELILTLANRT 122 ++A+W+P G HS+++ L++ P+ ++P + CT+ +SPL E L A R Sbjct: 62 ARHAIWLPPGRPHSSRMHGPFTGWSLYVAGPACQSLPDSPCTVAVSPLLWEAALRCAER- 120 Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182 +P+ RL V+ DEL + L LP+ S ++ + + P +L WAG Sbjct: 121 ANALPDPVQDRLAGVILDELRSMVPRPLGLPMPSDARLLRIARGLLADPARRQSLQAWAG 180 Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242 + A+S R L+R V ET LSF W Q+++L+ +L+ L G +V +VA LGYDS +AFI Sbjct: 181 WAALSPRTLSRRFVAETSLSFTAWTQRVRLLRSLEWLADGQSVTQVALDLGYDSVSAFIA 240 Query: 243 MFKKGLGQTPGRYIARLTTVSPQSAK 268 +FK+ LG+TP Y R + Sbjct: 241 LFKRELGRTPAAYFGRQAPADRRMPS 266 >UniRef50_Q2RRF5 Transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria RepID=Q2RRF5_RHORT Length = 247 Score = 240 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 79/245 (32%), Positives = 114/245 (46%), Gaps = 3/245 (1%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 +V H H QL+ A+ G W+VPP AVW+P G+ Sbjct: 3 PIRSVRARTSEWPTGTVIVPHSHPWCQLVYAIGGVTIVETPEGSWVVPPDRAVWVPAGIT 62 Query: 76 HSNQVTANAELCFLFI---EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTR 132 H + + +++ A +P C + +SPL RELIL R + Sbjct: 63 HCVRAARGGQNRSVYVTIEAAQAAGLPKGCKVVAVSPLTRELILEFGRRPDDYDEDGADG 122 Query: 133 RLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192 RL++VL D++ P Q LHLP P+ + + P + L +WA S R LA Sbjct: 123 RLVRVLLDQIAALPAQPLHLPWPRDPRALAVARALEADPADGRPLEEWAREAGASARTLA 182 Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252 R + GL+F QWR +L+L+ AL+ L G+ V VA +GYD +AFI MF++ LG TP Sbjct: 183 RTFRADCGLTFGQWRLRLRLLGALERLAAGEAVTAVAFDMGYDQPSAFIAMFRRLLGTTP 242 Query: 253 GRYIA 257 G Y Sbjct: 243 GAYFR 247 >UniRef50_A4WDQ0 Transcriptional regulator, AraC family n=18 Tax=Gammaproteobacteria RepID=A4WDQ0_ENT38 Length = 254 Score = 240 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 74/242 (30%), Positives = 122/242 (50%), Gaps = 1/242 (0%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 + + H + P HQH QL+ +L G + W+VPP VW+P G +H Sbjct: 11 QRPLVPYAHDYRHGDSEPYHQHDCAQLLHSLSGVVRVDTVAGCWVVPPGRGVWLPAGTQH 70 Query: 77 SNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135 + ++T N LFI+P + +P +C ++ISPL RELI+ + + R+ Sbjct: 71 AIRITGNVAARTLFIDPLARADLPASCQIVQISPLLRELIVASLDLPESYSPGSRDERVY 130 Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 +++ DE+ P HLP + + + + + P + Q A +MSER L R Sbjct: 131 ELILDEIRTMPVLPFHLPEPQSEPLHQLCQQIRQDPGLAWSSAQAASLTSMSERTLNRHF 190 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 ++TGLS+ +W ++ +L+ AL L +G V +VA LGY S +AF MF++ +G +P Y Sbjct: 191 QQQTGLSYGEWTRRARLVEALLRLAQGQPVLRVALDLGYGSHSAFTAMFRRVMGISPSDY 250 Query: 256 IA 257 Sbjct: 251 FK 252 >UniRef50_Q8L1B2 Transcriptional factor PhcT (Fragment) n=1 Tax=Comamonas testosteroni RepID=Q8L1B2_COMTE Length = 246 Score = 239 bits (610), Expect = 9e-62, Method: Composition-based stats. Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 2/247 (0%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 M + + D V +++ H H KGQL+ A G + + W Sbjct: 1 MATHPSHKHKQYDSLAWPVVVMESR-WPVGMSTGWHSHPKGQLLYATEGVMVVHTDAGSW 59 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA 119 +VPP A+WI G+ H+ + + + +I+ + VT +P + +SPL REL++ Sbjct: 60 IVPPNRALWITTGLRHTVTMAGDVLMRTAYIDAAKVTTLPHESSVINVSPLLRELLVEAV 119 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 + RL+++L DE+ LHLP+ ++R++ + ++ P + + Sbjct: 120 RIAFHTEPKGRDARLLELLIDEIRVSTTLPLHLPMPKDGRLRSICDQLSATPSDSSNAAE 179 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 WA + ER L RL KETG++F QWR+Q +L+ AL+G+ G+ V +VA GY S +A Sbjct: 180 WAASIHVGERTLHRLFAKETGMTFAQWREQARLLHALRGIAAGNKVIEVALDCGYGSASA 239 Query: 240 FITMFKK 246 F MF++ Sbjct: 240 FAAMFRR 246 >UniRef50_D0J513 Pyridoxamine 5'-phosphate oxidase-related protein n=2 Tax=Comamonas testosteroni RepID=D0J513_COMTE Length = 265 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 77/264 (29%), Positives = 140/264 (53%), Gaps = 6/264 (2%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 +MH L PD +V EL+S +HQH +GQL ++ G I+ V+ LW Sbjct: 4 LMHLLGSYMDSPDG---PSVVAATRMLESELSSEMHQHARGQLFGSIKGLISVQVDGGLW 60 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLA 119 +VP +AVW+P H+ + ++ E + +P C +++S L RE +L +A Sbjct: 61 VVPAIHAVWLPPHHAHAGRSFGPYHGWSAYVAEAACANLPAQPCIIRVSGLLREAVLRIA 120 Query: 120 NR--TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGAL 177 + + ++ + V+ DE+ P ++ LP+ + +++ + + + P + + Sbjct: 121 SSMPQASDQSSQAQSHICAVVLDEIRSLPVEEFGLPIPADARLQRIAKALIANPADERNI 180 Query: 178 GQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDST 237 WA F A+S R L+R V ETG +F WRQ+++L+ +L+ L +G ++ +A LGY S Sbjct: 181 DDWASFGAISSRTLSRRFVSETGFNFTAWRQRVRLLRSLEMLAEGISITAIALDLGYASI 240 Query: 238 TAFITMFKKGLGQTPGRYIARLTT 261 +A+I++F++ G+TP Y +RL Sbjct: 241 SAYISLFRRTFGETPACYRSRLKA 264 >UniRef50_Q15UL1 Transcriptional regulator, AraC family n=3 Tax=Alteromonadales RepID=Q15UL1_PSEA6 Length = 263 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 113/258 (43%), Positives = 157/258 (60%), Gaps = 3/258 (1%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 + +L +E + VA I + P+H H KGQLILALHG +TC V+ +WM Sbjct: 7 IQWDDLQQFE--VMPQPVVA-RIEKVNNSHELPLHTHSKGQLILALHGHVTCEVQGKMWM 63 Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANR 121 VP Q A+WIP HSN+ + +AELC +FI+P + MP CT +S L +ELI A + Sbjct: 64 VPTQSAIWIPTHTLHSNRASDHAELCHVFIQPGELRMPDKTCTFALSVLAKELICHFAKQ 123 Query: 122 TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWA 181 T RL QVL D + + PQQ ++LP+ SHP + + + + P + L QWA Sbjct: 124 DQHYPHFSPTNRLAQVLIDVVSESPQQPMNLPLPSHPTVAKLAQQLLSYPDDKKTLPQWA 183 Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241 +FAMSER LARLI +ETG++F WR Q+ +I+A+Q L+ TVQ+V+ LGY S +AFI Sbjct: 184 SYFAMSERTLARLIKRETGMTFGHWRAQMHVIIAVQKLMTNMTVQRVSEYLGYSSVSAFI 243 Query: 242 TMFKKGLGQTPGRYIARL 259 TMFK LG++P RYI + Sbjct: 244 TMFKNILGESPKRYIKQR 261 >UniRef50_Q4ZYQ3 Helix-turn-helix, AraC type:Arac protein, arabinose-binding/dimerisation n=22 Tax=Proteobacteria RepID=Q4ZYQ3_PSEU2 Length = 267 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 80/243 (32%), Positives = 119/243 (48%), Gaps = 2/243 (0%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 + + + +P H+H Q A+ G + + PPQ+ VW+P G+EH Sbjct: 25 PRPLYARAESLSAGSWTPPHRHDWVQFSYAISGVLGVHTAEGSFFAPPQWGVWVPAGLEH 84 Query: 77 SNQVTANAELCFLFIE-PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRA-EPMTRRL 134 + AE+ L+I + P C L+++PL RELI + + RL Sbjct: 85 EVVTSMRAEMRSLYIRTADSGWAPQRCRVLEVTPLARELIKSFCLLPVDYPEQDSHEARL 144 Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 +QVL D+L Q P+ LP+ HP++ + + + P L WA SE+ L RL Sbjct: 145 VQVLLDQLAQLPEVGFSLPLPRHPRLLGLCNELIEEPGRLITLHDWAARLGTSEKTLMRL 204 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 +ETGLSFR WRQ+ +L+ +L L +G +V + A GYDST+AFI FK G TPG Sbjct: 205 FQRETGLSFRGWRQRARLLSSLSALEEGASVTRTALACGYDSTSAFIAAFKGLFGHTPGD 264 Query: 255 YIA 257 Sbjct: 265 LFK 267 >UniRef50_B3RAF2 Putative Transcriptional Regulator, AraC family n=1 Tax=Cupriavidus taiwanensis RepID=B3RAF2_CUPTR Length = 265 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 76/251 (30%), Positives = 123/251 (49%), Gaps = 1/251 (0%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 + I A + + H+H Q AL G + + ++ PPQ+AVWIP GV H Sbjct: 15 PRPLYGHIEALPNRVLGYRHRHPWCQFAYALQGVLEVWTDRGRFVAPPQWAVWIPAGVAH 74 Query: 77 SNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135 + + L+++ S + C L +SPL RELI ++ RL Sbjct: 75 RVRCATGTRIRSLYLDNSVCAAARSRCRVLTVSPLLRELIRAFSHLPAEYDERGADGRLA 134 Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 +VL D+L P+ + LP+ + P++R + + + +L W+ A+S + L RL Sbjct: 135 RVLLDQLGAAPEVEFMLPLPADPRVRLVCNGLQRHADRDTSLAAWSMRLAISGKTLTRLF 194 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 V+ETGL+FR WRQ+L+L+ A+ L +G+ V +VA GY+S +AFI F++ TPG Sbjct: 195 VRETGLTFRAWRQRLRLLDAVPRLERGEAVTEVALDCGYESLSAFIAAFRRLYNMTPGEL 254 Query: 256 IARLTTVSPQS 266 + Sbjct: 255 SRANRILPAGG 265 >UniRef50_D0B292 Transcriptional regulator n=40 Tax=Rhizobiales RepID=D0B292_BRUME Length = 289 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 82/275 (29%), Positives = 129/275 (46%), Gaps = 8/275 (2%) Query: 1 MMHRLNLNGYEPDR------HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCT 54 M +L + R A+A D P H H + QL+ A G + T Sbjct: 11 MPENEDLQRFHEHRIAMLESMTGPAIALPTRY-PDGYFVPRHSHSRAQLLCASQGVVLVT 69 Query: 55 VENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRE 113 + WM+P +A+WIP GVEHS + + + ++I A++ +P + ++ L R Sbjct: 70 TDAGRWMIPSDHAMWIPAGVEHSVAILGDVFMRSIYISVDAISGVPNYLHVVGLTDLMRC 129 Query: 114 LILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVE 173 LI+ + + E +I+++ +L P+ L LP S P+++ + K P Sbjct: 130 LIIDATSHDSIPAPESRDGLVIELILRDLHTLPEYPLGLPFPSDPRLQKLCRDFVKKPSS 189 Query: 174 WGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLG 233 + +WA AMS R+ R +ETG+S WRQQ L A+ L +G+ V VA LG Sbjct: 190 RATIDEWADRMAMSRRSFTRHFQRETGVSLSVWRQQACLFAAVPRLSEGEPVTSVALDLG 249 Query: 234 YDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSAK 268 YDS +AF TMF++ LG P Y RL + + Sbjct: 250 YDSVSAFTTMFRRMLGVPPKFYQPRLDVAPFERSD 284 >UniRef50_B0RW44 Transcriptional regulator, AraC family n=6 Tax=Xanthomonas RepID=B0RW44_XANCB Length = 329 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 81/263 (30%), Positives = 132/263 (50%), Gaps = 10/263 (3%) Query: 17 EAAVAFCIHAGTDELTSP---VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGG 73 + V A + +P H H +GQL+ G +T E+ +PP A W+P G Sbjct: 67 DGPVVVAFRADLRAVWAPETAWHAHVRGQLMYVEQGVLTVHTEHGTSSLPPGCAGWMPPG 126 Query: 74 VEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRA----E 128 +H+ ++ + + P A T +P +++S L RE+I+ A+ ++ + Sbjct: 127 QQHTVELAGPLRGWGVVVRPDACTGLPARSGVIRLSGLAREVIMRAASWPLSEMLGEPVD 186 Query: 129 PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSE 188 P +RL VL DEL Q P + LHLP+ + ++ + + P + L WA + +S Sbjct: 187 PARQRLAAVLLDELCQAPIEHLHLPMPADRRLLRIARQLLDTPADPRPLDVWATWGGLSP 246 Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGL 248 R+L+R ETGLSF QWRQQ +L L+ L +G V +VA LGY S +AF+++F + Sbjct: 247 RSLSRHFRDETGLSFAQWRQQARLAEGLRRLSQGTAVAQVADQLGYSSPSAFVSVFHRHF 306 Query: 249 GQTPGRYIA--RLTTVSPQSAKP 269 G P RY+A ++ +A Sbjct: 307 GAPPARYLAGGHARGLASPAASG 329 >UniRef50_B3QB90 Transcriptional regulator, AraC family n=3 Tax=Alphaproteobacteria RepID=B3QB90_RHOPT Length = 248 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 80/237 (33%), Positives = 122/237 (51%), Gaps = 1/237 (0%) Query: 21 AFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV 80 + S H H + QLI A+ G ++ T + W+VPP AVW+P GVEH + Sbjct: 10 VAVVSQDAHRFASRRHSHPQAQLIYAITGVVSVTTADGTWVVPPSRAVWVPAGVEHDTKS 69 Query: 81 TANAELCFLFIE-PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLF 139 + + L I+ + +P C ++++PL RELIL L ++R + Q+L Sbjct: 70 HSAVQFRSLLIDSVEVMGLPVVCMAMEVTPLLRELILRLVAIADAPGRVELSRVVTQLLL 129 Query: 140 DELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKET 199 EL P + L LP HP++ + + P +L Q A MS + RL ET Sbjct: 130 MELASLPVEPLSLPTPRHPQLARFCDQIRGEPAASVSLEQAARALHMSRASFMRLFQHET 189 Query: 200 GLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 G+SF +WRQQ +L+ AL L +G ++ VA GYDS +AF MF++ LG++P +Y Sbjct: 190 GMSFLRWRQQARLLHALSLLAEGQSILNVALACGYDSPSAFSAMFRRVLGKSPSQYF 246 >UniRef50_A3Y5B2 Probable transcriptional regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y5B2_9GAMM Length = 258 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 71/231 (30%), Positives = 113/231 (48%), Gaps = 2/231 (0%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 +H H QL+ A G + +N + VPPQ A+W+P +H +V A Sbjct: 26 PAGYKGQLHHHIWYQLMYASSGVLNVEYQNQIMFVPPQKAIWLPPNCDHRVRVPVGAHFH 85 Query: 88 FLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQ-RAEPMTRRLIQVLFDELPQQ 145 ++ P V + T L ++PL RELIL + T + +RL QVL D+L Q Sbjct: 86 SVYFRPDTVTALGNTSKVLSVTPLVRELILAVGEMTHEDKELDDKDKRLTQVLIDQLSLQ 145 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 L + + S ++ +V + P +L +WA +S R + R+ KE G+ F++ Sbjct: 146 ADSALSILIPSDKRLAELVRQIIHTPSNGVSLEEWAQTLNLSSRTITRIFTKEVGMGFKE 205 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 WRQ+++L+ A+ L KG +V +VA +GY S +AF FK+ P Y Sbjct: 206 WRQKVRLLEAINLLEKGLSVTQVALEVGYQSPSAFTYAFKQVFDTNPASYF 256 >UniRef50_Q11FA3 Transcriptional regulator, AraC family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11FA3_MESSB Length = 258 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 1/243 (0%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 +V P+H H Q + A G + T+E A +++ P+ A+WIP GV H Sbjct: 16 SRSVFLRSQKLPARHGFPMHTHPWNQFVYATTGTLMVTIEQARYVITPEQAIWIPTGVRH 75 Query: 77 SNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135 + ++ E L++E + MP C L +S L R LIL LA L Sbjct: 76 TTTALSDVEFRNLYVEDLPNLNMPADCSVLAVSTLLRSLILELAEVEQKSDHSEYRDHLD 135 Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 V+ ++ + + LP +R + E++ P E + +WA MS R L+R Sbjct: 136 AVILVQMSRLRKLDFFLPWPHSSHLREICEVLYAHPDEPRDITEWASRAGMSARTLSRHF 195 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 ETG+S R WR +L++ A++ L V +A LG+ S +AF F+ +G +P + Sbjct: 196 NAETGMSLRVWRHRLRVFRAVELLSAHWRVTDIALELGFSSASAFTYAFRTEMGCSPTEW 255 Query: 256 IAR 258 IAR Sbjct: 256 IAR 258 >UniRef50_Q2SEK4 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SEK4_HAHCH Length = 255 Score = 236 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 76/243 (31%), Positives = 113/243 (46%), Gaps = 2/243 (0%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 + + + + E H H GQL L G + W++P WIP GV Sbjct: 14 PQDILVRRLRSEGTEEREG-HSHEHGQLFCVLQGLTVVDTDAGRWLMPSNRLGWIPPGVR 72 Query: 76 HSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134 H Q L++ P +P C + + L +I +A T + + RRL Sbjct: 73 HGAQYFGAIAGWSLYLHPDICEPLPDEPCVYEANALMTPVIARIAEWTAGEPLDAPRRRL 132 Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 + VL DE+ Q LHLP+ ++ + + P +L A +SER L R Sbjct: 133 LHVLMDEIQAAQQPALHLPMPRDQRLLRLSHKLLATPENNDSLLALASDIGLSERTLTRK 192 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 +ETGLS QWRQ +L AL+ L +G +V + A LGYDS +AFI +F++ G+TPGR Sbjct: 193 FREETGLSLGQWRQLARLARALELLAQGVSVTQTALDLGYDSVSAFIALFRRYFGETPGR 252 Query: 255 YIA 257 Y+ Sbjct: 253 YLK 255 >UniRef50_Q2K0F2 Probable transcriptional regulator protein, AraC family n=6 Tax=Rhizobium etli RepID=Q2K0F2_RHIEC Length = 278 Score = 236 bits (602), Expect = 8e-61, Method: Composition-based stats. Identities = 77/249 (30%), Positives = 116/249 (46%), Gaps = 1/249 (0%) Query: 26 AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85 A T H H + QL + G++ E ++VPP+ AV++P GV H E Sbjct: 30 AEPAGRTYSFHAHHRAQLFQIVRGSLRLETERGYFIVPPERAVFVPSGVLHEVTYLQETE 89 Query: 86 LCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ 144 +LF P AV +P+ + +PL RE IL RL+ V+ D+L Sbjct: 90 RSYLFFRPDAVVNLPSQVSVIGTTPLLRETILAFLEIPRADAGSARAERLVAVILDQLQT 149 Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204 P L LP + ++R++ + P L + A AMS R+ R ETG+SFR Sbjct: 150 SPVAPLSLPSPASERLRSIASDIRNEPGADWPLDELASRAAMSPRSFQRHFHTETGMSFR 209 Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSP 264 WRQQ +L+ A++ L G +V +A +LGY +AFI +F+ G +PG+Y Sbjct: 210 AWRQQAKLLKAVEWLAAGRSVGDIAFSLGYSGPSAFIAVFRTAFGVSPGQYFQGTFPGHG 269 Query: 265 QSAKPDPRQ 273 + P Q Sbjct: 270 AGSSARPAQ 278 >UniRef50_B1TGD6 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria RepID=B1TGD6_9BURK Length = 261 Score = 236 bits (602), Expect = 8e-61, Method: Composition-based stats. Identities = 77/264 (29%), Positives = 123/264 (46%), Gaps = 4/264 (1%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 M H + + D V + E S H H++ QL+ GA+T + Sbjct: 1 MAHYEPNHVLDLDAASCPIVGIAYESR--EHDSQWHAHQRTQLLYLTEGAVTLQTAERIG 58 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLA 119 + P A+W+P GV H + L+ + +P +++S L RELI+ + Sbjct: 59 HLAPLQAIWLPEGVRHRAVMHGRFAYRSLYFDVQTYRDLPRAAVIIEVSQLLRELIVRVT 118 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 RL+ VL DEL P L+LP+ ++ + + P E L + Sbjct: 119 EWPIDDALTDARTRLVSVLLDELEAAPASPLYLPMPRDRRLGAIANALVDDPSEQRTLDE 178 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 WA S R LARL V+ETGL++ QWR + +L++A L +G ++ +VAH +GY S +A Sbjct: 179 WADRVGASARTLARLFVRETGLTYVQWRTRCRLLVAQTRLAEGASITEVAHAVGYASDSA 238 Query: 240 FITMFKKGLGQTPGRYIARLTTVS 263 FI M+++ G+ PGR R+ Sbjct: 239 FIAMYRRLYGEPPGR-RNRIRHPG 261 >UniRef50_B4EJY3 AraC family regulatory protein n=10 Tax=Burkholderia RepID=B4EJY3_BURCJ Length = 279 Score = 235 bits (601), Expect = 9e-61, Method: Composition-based stats. Identities = 66/242 (27%), Positives = 109/242 (45%), Gaps = 2/242 (0%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 + H H QL+ A G + T + ++PP YA+WIP V H+ Sbjct: 38 PGNASVDAHSHPWAQLMYATSGVLEVTTPSGRQLLPPHYAMWIPPHVPHAVSTRDCVAFH 97 Query: 88 FLFIEPSAVTMP--TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 L+++ + C L ++PL REL++ L+ ++ D + + Sbjct: 98 SLYLDEAIARRDVNDDCTILCMTPLLRELMIATGELPVNYDEAGPDGALVCLIADRIARM 157 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 L +P+ P++ + + P + +L +W + R L+RL ++TGLSF + Sbjct: 158 QPAPLTVPLPRDPRLLKIARALHAAPGDTRSLDEWGRQVGATRRTLSRLFRQDTGLSFTE 217 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ 265 WRQ ++L+ +L L G + VA LGYDST++FI +F TPG Y R Sbjct: 218 WRQAVRLLASLPLLDAGAPIGTVAAQLGYDSTSSFIALFHAKFRVTPGAYAKREARRPVL 277 Query: 266 SA 267 SA Sbjct: 278 SA 279 >UniRef50_B4SQ42 Transcriptional regulator, AraC family n=5 Tax=Xanthomonadaceae RepID=B4SQ42_STRM5 Length = 293 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 74/272 (27%), Positives = 121/272 (44%), Gaps = 1/272 (0%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 ++ L+ +E + H H++ QLI G +T + W Sbjct: 13 LLRDDALDWFERNDGPPVVAFRFDSPQGLVREVDWHHHQRAQLICVERGLLTTRTSHGTW 72 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELC-FLFIEPSAVTMPTTCCTLKISPLCRELILTLA 119 + P A W+P H+ + P+ +P+ C L +S L + L + Sbjct: 73 SLAPGSAGWMPPLEPHTVTLDGPLRGWGMALAAPACAALPSDPCVLGLSKLAQALADRIC 132 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 P + +I VL DE+ P+Q++HLP+ ++ + + P + +L + Sbjct: 133 EWPLGYATTPERQHIIDVLLDEIRTAPRQRMHLPMPHDRRLLKIASQLLADPSDERSLAE 192 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 WA + +S R+L R ET LSF QWRQQ +L AL+ L G +V +AH LG+ S +A Sbjct: 193 WAHWAGLSPRSLTRHFRDETTLSFAQWRQQARLSEALRQLTDGRSVADIAHALGFSSASA 252 Query: 240 FITMFKKGLGQTPGRYIARLTTVSPQSAKPDP 271 F+T+F++ G PGRY+AR P Sbjct: 253 FVTVFRRHFGLPPGRYLARAGHGLETGLDPAR 284 >UniRef50_Q4K6D5 Transcriptional regulator, AraC family n=8 Tax=Pseudomonas RepID=Q4K6D5_PSEF5 Length = 272 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 81/258 (31%), Positives = 122/258 (47%), Gaps = 5/258 (1%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 D H V+ D P+H+HR+ Q + A G + W++PP AVWIP Sbjct: 18 IDHFHHGPVSAYPRDYPDAAHQPLHRHREAQFLYAACGTMRLVTAQGAWVIPPSRAVWIP 77 Query: 72 GGVEHSNQVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130 VEH + + LFI+P CC L ++PL RELIL + Sbjct: 78 PLVEHEIFMVGEVRMRSLFIDPELSAPALRQCCVLAVTPLLRELILRAVQGPEQAENPLI 137 Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190 Q++ +E+ LH+P+ +++ + + + P L WA S R Sbjct: 138 Q----QLMLEEIAALENLPLHIPMPQDRRLQAICRTLIQTPDHPHTLEDWAQQVGASSRT 193 Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250 LARL ++ ++F WRQQ++L+ AL L+ G++V VA +LGY S AF MF + LG Sbjct: 194 LARLFQQQVQMNFNAWRQQVRLMEALPRLLAGESVHNVADSLGYGSARAFSAMFCRLLGD 253 Query: 251 TPGRYIARLTTVSPQSAK 268 TP Y+A L +S +A Sbjct: 254 TPRHYVAALNQLSAINAS 271 >UniRef50_B5WKD5 Transcriptional regulator, AraC family n=1 Tax=Burkholderia sp. H160 RepID=B5WKD5_9BURK Length = 277 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 70/251 (27%), Positives = 113/251 (45%), Gaps = 4/251 (1%) Query: 9 GYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAV 68 + + +A P H H +GQ A G +T W+VPPQ AV Sbjct: 27 PFSYEEVPRDVIATE-RLYLSGFVHPDHTHTRGQFAYAAEGVMTVLTTAGNWVVPPQCAV 85 Query: 69 WIPGGVEHSNQVTANAELCFLFIEP---SAVTMPTTCCTLKISPLCRELILTLANRTTTQ 125 W+P V H Q++ + F+ A +P CC + S L R+LI + Sbjct: 86 WLPADVPHEMQMSGQVRMLNAFVHVRAKQASQLPRHCCVVSTSSLLRDLISEAVQQPALY 145 Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185 R++ +L DE+ L+ P+ + P++ + + P L + A Sbjct: 146 NPTTRAGRIMALLVDEIAAMQPLALNAPLPNDPRLAALCREVLDAPSATLGLDEAASRIG 205 Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245 +S R+ RL ++ G+SF WR+Q L+ A+ +G+++ +VA+ LGY S TAF TMFK Sbjct: 206 LSRRSFTRLFREQLGVSFVAWREQACLLSAIARFARGESITRVAYDLGYSSPTAFSTMFK 265 Query: 246 KGLGQTPGRYI 256 + +G P Y Sbjct: 266 RVVGVAPYHYR 276 >UniRef50_A4CF02 Transcriptional regulator, araC family protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CF02_9GAMM Length = 265 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 2/250 (0%) Query: 10 YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69 + PD + H H QL + G + + L++VPPQ A+W Sbjct: 16 HYPDGLPHPVMPLSSEFSPMTQVI-KHAHPWSQLAYSSQGILQIETDQGLFVVPPQQALW 74 Query: 70 IPGGVEHSNQVTANAELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAE 128 +P + H L L + + TL + PL + LIL + + + Sbjct: 75 LPPNMTHQITCQCPTRLRSLHFQDHITAPLGDAIQTLAVGPLLQALILEVCHWGRDYQLS 134 Query: 129 PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSE 188 +R+I VL D+L P+Q +P + +++ +V P L +A S Sbjct: 135 TEKQRVIDVLVDQLVSAPKQDFFIPNITDKRLQPIVSHFNHHPESKRTLNDFANQVGAST 194 Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGL 248 R L RL + + F QW+Q+++++ AL L + ++ +A TLGYDS ++FI FK+ + Sbjct: 195 RTLHRLFLLNFAMGFNQWKQRIRVLKALTLLDQDLPIKDIAATLGYDSDSSFIAAFKQQM 254 Query: 249 GQTPGRYIAR 258 G P +Y + Sbjct: 255 GLPPKQYRKQ 264 >UniRef50_D1P6X5 Transcriptional regulator, AraC family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P6X5_9ENTR Length = 276 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 72/263 (27%), Positives = 115/263 (43%), Gaps = 3/263 (1%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 H N++ D +A + H+HR+ Q + G I + + W+ Sbjct: 10 THMRNISLNTIDAVPRDVLAIGTDY-PPNVLLSAHEHRRAQFLYGATGLIEVSTADGEWV 68 Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTT-CCTLKISPLCRELILTLAN 120 +PP VWIP H ++ N L+IEP+ + C L++S L R+L+L + Sbjct: 69 IPPDCGVWIPAQTLHETRML-NVSTRSLYIEPTVAPRQSRKCEVLRVSRLLRQLLLEAVD 127 Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180 LIQ++ E+ + P+ + T+ P +W Sbjct: 128 IPLEYDLHGREGILIQLILHEVARAKPLPFFAPIPRDTHLATLCREFLTAPHITSLPQEW 187 Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240 A SER+ +R +TGLSF WRQQ L+ A+ + G ++ +VA LGY + +F Sbjct: 188 AKKLHKSERSFSRFFSAQTGLSFSNWRQQACLLNAITNISAGKSITEVAFDLGYCNVGSF 247 Query: 241 ITMFKKGLGQTPGRYIARLTTVS 263 TMFKK LGQ P +I ++ S Sbjct: 248 STMFKKWLGQPPSSFIQQIDESS 270 >UniRef50_B7GW45 Bacterial regulatory helix-turn-helix protein, AraC family protein n=13 Tax=Acinetobacter RepID=B7GW45_ACIB3 Length = 264 Score = 233 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 72/242 (29%), Positives = 117/242 (48%), Gaps = 2/242 (0%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 + F + E P H H G+ I A G + ++ ++ PP Y +W+P +H Sbjct: 21 PDLLWFRVRNAPAETVYPQHAHAWGEFIYAFSGVLEVNIDQINYLTPPPYGIWLPPYTKH 80 Query: 77 SNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135 S L++ S +P L SPL L+ L + + RL+ Sbjct: 81 SGINRNEVTHATLYVHESLCQKLPQKAGILLTSPLVPALLDHL-RQNPQDETQVEYIRLL 139 Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 QVL D+L Q +LP + HP + ++ + + P + L + A M+ER LAR Sbjct: 140 QVLLDQLIQAELVGSYLPTTDHPALAKILNDLHQCPADNSTLQELAERINMTERTLARYS 199 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 KE G+S +WRQ+L+++ A+ L +G T++ +A LGY S +AFI MFK+ +G TP ++ Sbjct: 200 QKELGMSLHEWRQRLKVMKAMTMLNQGKTIESIAFDLGYASASAFIYMFKRWMGFTPDQF 259 Query: 256 IA 257 Sbjct: 260 RK 261 >UniRef50_A9IA98 Transcriptional regulator, AraC family n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IA98_BORPD Length = 243 Score = 232 bits (593), Expect = 9e-60, Method: Composition-based stats. Identities = 71/239 (29%), Positives = 113/239 (47%), Gaps = 2/239 (0%) Query: 25 HAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANA 84 H H H +GQL+ A G + W + P+ A+WI GV+H + Sbjct: 5 HDYEHGSREIWHSHEQGQLVHATSGVVRVLTSQGGWTLAPRQALWIAPGVDHELHMIGQV 64 Query: 85 ELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELP 143 + +L IEP A + C ++++PL RELIL + E ++ +L +L Sbjct: 65 AMRWLRIEPDAAPWLWAECRQIRVTPLLRELILKMLQDPPVYPPESNAAMIVPLLLRQLQ 124 Query: 144 QQPQ-QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202 + LP+ ++ + E++ + P + S R L+RL ++TGL+ Sbjct: 125 EAEVIVHGKLPLPRDKRLLKVCEVLIRSPANNDPMALLGERAGTSVRTLSRLFKEQTGLT 184 Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTT 261 F QWRQQL+L A+ L G +V VA +GY + AF TMF++ LG TP RY+ + Sbjct: 185 FVQWRQQLRLSEAVCQLSLGQSVSSVAQDMGYATANAFSTMFRRTLGATPQRYMRETRS 243 >UniRef50_A6WQB9 Helix-turn-helix-domain containing protein AraC type n=4 Tax=Shewanella baltica RepID=A6WQB9_SHEB8 Length = 305 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 7/231 (3%) Query: 32 TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91 H H GQ+I A G ++ ++VPP+ AVW+P V+H +L L++ Sbjct: 51 HVQRHSHPWGQVIYASQGVLSVITPAGRYIVPPEQAVWVPPFVDHEVIALGQVQLSSLYL 110 Query: 92 EPSAVT-MPTTCCTLKISPLCRELILTLANRT------TTQRAEPMTRRLIQVLFDELPQ 144 + + + P C L + P+ + L+ + RL+ V+ D + Sbjct: 111 DETQIGGFPPDCTCLSVKPVLQLLLQEANALMKSEAGLIEPDDKDSVMRLLMVIRDFMVL 170 Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204 P+ L LP K+ + E + P E L W S R LARL ++TGLS+ Sbjct: 171 APKVALDLPYPKDKKLLRITEALLADPSEQRTLVDWQREVGASARTLARLFKQQTGLSYS 230 Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 QW Q+L+L +A+Q L +G++V A +LGY S +AF MF++ +G P +Y Sbjct: 231 QWLQRLRLQVAIQMLSRGESVLTTALSLGYASGSAFGYMFRQLMGVAPSQY 281 >UniRef50_A5FCF5 Transcriptional regulator, AraC family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FCF5_FLAJ1 Length = 272 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 70/221 (31%), Positives = 118/221 (53%), Gaps = 1/221 (0%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H + QLI A G + V N +W+V P +WIP GVEH + +FI+PSA Sbjct: 39 HSHPRAQLIYATRGVMNVVVGNNIWVVNPLQGLWIPSGVEHQVTFQKDVNYYSVFIDPSA 98 Query: 96 VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 + +P + I ++L+ + + T+ R+I V DEL LP Sbjct: 99 IGGLPEKSFSFDIPMFLKQLVFKIISFGTSGNLTESQLRIIYVFLDELALIVPSATFLPT 158 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 ++ +++ +VE++ + +A MS R L+RL +KE G++F WR +++L+ Sbjct: 159 TNDERLQKVVELLMSDVSSKQTIDYYAELSFMSSRTLSRLFIKELGMNFSDWRTRMKLLE 218 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 A++ L + +++++A LGY++ +AFI MFKK LG+TP Y Sbjct: 219 AIKRLGEKQSIKEIALDLGYETASAFIYMFKKHLGKTPSNY 259 >UniRef50_C9PF84 Transcriptional regulator AraC family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PF84_VIBFU Length = 248 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 67/239 (28%), Positives = 113/239 (47%), Gaps = 1/239 (0%) Query: 18 AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77 V H T H+H+ Q + AL+G I W+V +WIP GV HS Sbjct: 4 PPVLAYAHDYMHGDTEAAHEHQCAQFLHALNGVIRVDTAAGTWVVTANKGMWIPAGVSHS 63 Query: 78 NQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136 ++T + ++ LF++ + +P TC ++ L + LI+ + + A R+ + Sbjct: 64 LRITGHVKVRTLFVDAMARADLPNTCVLSEVPSLLKHLIVEAVSLPEERIAGTREERIFE 123 Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196 ++ DEL + +LP S + + + ++ A + SER ++R Sbjct: 124 LILDELRRLKPVDFYLPNPSSDGLIMLCDYVSDRIAHPWTATDAAKYLGQSERTVSRKFQ 183 Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 +E GL+F +W +Q +L+ AL+ L G +V A +GYDS +AF MFK +G TP Y Sbjct: 184 QELGLTFTEWLRQKRLVHALELLASGHSVLDSALEIGYDSPSAFSAMFKSRIGLTPSEY 242 >UniRef50_B6ELX6 HTH-type transcriptional regulator, AraC family n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6ELX6_ALISL Length = 275 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 67/266 (25%), Positives = 117/266 (43%), Gaps = 3/266 (1%) Query: 6 NLNGYEPDRHHEAAVAFCIHAGTDELTSP--VHQHRKGQLILALHGAITCTVENALWMVP 63 + P H E + H + GQL L G + V+ + P Sbjct: 9 TYKKFMPKLTETLPTDVFCHYFFIEAKTETLPHSYSWGQLHLIKQGVLEMEVDQQKMVCP 68 Query: 64 PQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRT 122 Y +W P +H ++ E C + I P C + ++PL R +I L R Sbjct: 69 ANYTIWTPPHQKHRAFNRSDIEYCAINITAELSEKFPKHACMIPLTPLLRAIIDDLIERK 128 Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182 TT + + L VL D L + +++LP + + ++ + + P + +L WA Sbjct: 129 TTMVSSEEDKCLSYVLMDRLVKINPIEIYLPSTQDKLLAPILTQLEETPEDDSSLSVWAK 188 Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242 +ER LAR KE +SF WRQ+ +L+ A+ L + ++ ++A+ LGY ++FI Sbjct: 189 RVFSTERTLARRFQKELKMSFNDWRQRAKLVKAMTLLKESISINEIAYQLGYSQGSSFIK 248 Query: 243 MFKKGLGQTPGRYIARLTTVSPQSAK 268 MF+K G TP ++ + T++ + Sbjct: 249 MFRKHTGVTPEQFRKQNETLTVEITS 274 >UniRef50_A0NPK3 Probable transcriptional regulator protein, AraC family protein n=2 Tax=Rhodobacteraceae RepID=A0NPK3_9RHOB Length = 262 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 74/252 (29%), Positives = 123/252 (48%), Gaps = 2/252 (0%) Query: 6 NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65 L + + + + + H H QL + G+I E + VPP+ Sbjct: 6 ELAEFPREAVAAPIIGYA-RTQLQGRNNGWHSHDAAQLFHVIRGSIAIDTEMGTYFVPPE 64 Query: 66 YAVWIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTT 124 AVW+P V H + + EL +++++ +P T ++++ L R LIL + + Sbjct: 65 RAVWLPPRVSHQTRYLTDTELRYIYVQYDYTRDLPKTPQVMQVTTLLRALILEFMSYPRS 124 Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184 + + R+ V+ D+L P L LP+ ++R + E + + P +L + A Sbjct: 125 ETDKGPAARIAAVILDQLKMLPVAPLQLPMPQDARLRDLCEGVVRCPAHIPSLSEAADRC 184 Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244 A S R+ R I ETGLS+R W +Q++L AL+ L G +V V+H LGY+ +AF++ F Sbjct: 185 ATSVRSFERRIKAETGLSYRTWCRQVKLFRALELLASGRSVSDVSHKLGYEGPSAFVSTF 244 Query: 245 KKGLGQTPGRYI 256 KK G TPGRY Sbjct: 245 KKAFGVTPGRYF 256 >UniRef50_A3RTS8 Transcriptional regulator, AraC family n=4 Tax=Ralstonia solanacearum RepID=A3RTS8_RALSO Length = 365 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 74/252 (29%), Positives = 114/252 (45%), Gaps = 3/252 (1%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 V P H H Q+ + G + + W+VPP A+WIP G+ Sbjct: 116 PAHPVRLYTRQMQANSRFPRHTHAWAQVAYSHTGVLRVQAGDTAWVVPPSRAIWIPPGIV 175 Query: 76 HSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134 H V A L L+I+PS V C +++SPL RELI + R A + L Sbjct: 176 HEVWVVEAAFLRTLYIDPSVVTDALAQCRVMEVSPLLRELIAAMDVRRPL--APAREQAL 233 Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 ++ DEL + L LP+ + ++R + E + P A S R LAR Sbjct: 234 ATLILDELRRSAPLPLDLPMPADKRLRALCERVMADPGTPLTFDALAREVGASTRTLARR 293 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 E G++F QWRQQ L A+ + +G + ++A LGY+S +AF MF++ GQ+P Sbjct: 294 FRDELGVNFSQWRQQAVLASAIPLMSQGLPLSRIAQELGYNSQSAFSAMFRRAFGQSPSA 353 Query: 255 YIARLTTVSPQS 266 ++ R + + Sbjct: 354 FLHRPGPEAEAA 365 >UniRef50_Q2BIT2 Transcriptional regulator, AraC family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIT2_9GAMM Length = 262 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 75/246 (30%), Positives = 119/246 (48%), Gaps = 3/246 (1%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 + + + + ++ P H G+ + + G + E + VPP + +W P G EH Sbjct: 17 PEPIYYFLRSMPEDTIYPAQTHPWGEFVFSFSGVLELHAEEQEFRVPPNFGLWHPAGTEH 76 Query: 77 SNQVTANAELCFLFIEPSAVT---MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRR 133 +E C L+I+ T MP T C L +SP+ RE+++ L N R Sbjct: 77 QGGNRNASEHCSLYIDDELATKRGMPKTSCALLVSPMLREMLIHLRNHFPKPPYTEQESR 136 Query: 134 LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193 L+ V+ D+L P +LP S P I ++ + P ++ A F MSER LAR Sbjct: 137 LLDVILDQLIVTPIAGNYLPDSKDPLITQVLAYLKDDPGANHSIRAIAEQFGMSERTLAR 196 Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253 E + +WRQ+L+++ A+ L +G +V+ VA LGY + +AFI MFK+ LG TP Sbjct: 197 KAQSELNMPLSEWRQRLKVVRAVPMLQEGTSVESVALDLGYSTASAFIAMFKRLLGTTPD 256 Query: 254 RYIARL 259 Y + Sbjct: 257 EYRKKR 262 >UniRef50_C1MBM6 Transcriptional regulator n=2 Tax=Citrobacter RepID=C1MBM6_9ENTR Length = 261 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 2/241 (0%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 V F + P H H Q A G++ V W++P Y +WIP EH Sbjct: 21 PQDVFFRSYVLEANHHVPQHSHSFMQFHFARKGSMRIDVAGKCWIIPAHYGIWIPNNTEH 80 Query: 77 SNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLA-NRTTTQRAEPMTRRL 134 + + L L I+P + C + IS RE I + + ++ +L Sbjct: 81 AVWALDDVYLENLDIKPGFLEESINECKVVAISDFAREFIHYATNSISGHYDSQSKEGKL 140 Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 + VL D + Q P+ LP ++ + + + P ++ WA MS R +R Sbjct: 141 VSVLVDIILQLPEVAFVLPWPQDRELTKVCRTIQESPALEHSVEYWAQHLGMSARTFSRH 200 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 KETGL F W+Q+++++ ++ L K +V VA +GY ST AF F++ G P Sbjct: 201 FKKETGLPFSVWKQKMRILESVLMLKKNKSVTAVALDVGYSSTAAFSYAFRQAFGVPPSN 260 Query: 255 Y 255 Y Sbjct: 261 Y 261 >UniRef50_Q28MP8 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28MP8_JANSC Length = 270 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 77/248 (31%), Positives = 116/248 (46%), Gaps = 2/248 (0%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 V + TD L P H H K QLI A+ G + + + +PP A+ +P Sbjct: 23 DRPIVGYAKDYPTDHLALP-HTHPKAQLIYAVSGVMHVDTGTSSYTLPPTTALLMPANRA 81 Query: 76 HSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134 HS + + LF++ ++ + C + +S L +ELIL + + Sbjct: 82 HSIYMDGPVAMRALFLQQKQPSVDLSACKVVSVSALLKELILAACDEPVEWEQTGRAPHI 141 Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 + + E+ Q L LP+ + P+I + + + P + +L WA F SER LARL Sbjct: 142 VALALHEIAQAVNLPLGLPLPTDPRIARVTDALRMRPADSRSLQDWALFAGASERTLARL 201 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 KETG++F QWR Q +L AL L +G T+ A GYDS AF F++ GQTPG Sbjct: 202 FRKETGMTFNQWRGQARLTAALSALSQGRTLAHAAAVAGYDSQPAFGAAFRRAFGQTPGE 261 Query: 255 YIARLTTV 262 A+ T Sbjct: 262 ARAQHATR 269 >UniRef50_B2I1A9 AraC-type DNA-binding domain-containing protein n=8 Tax=Gammaproteobacteria RepID=B2I1A9_ACIBC Length = 262 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 110/257 (42%), Gaps = 3/257 (1%) Query: 6 NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65 N+ + D +A +A + H HR+ Q + A G + E+ W+V P Sbjct: 3 NIPINDVDHLPQAVLALGSDY-PADTLLDTHSHRRAQFLYAPEGLMKVETEDGQWLVLPY 61 Query: 66 YAVWIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTT 124 VWIP G H + L+IE S A C +++SPL +L++ Sbjct: 62 SGVWIPAGKPHRVW-LSKVSTYSLYIEVSNAPRQANYCEVIQVSPLLHQLLIQANQLPID 120 Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184 + LI +L EL P L +P+ + + + P + WA Sbjct: 121 YQRAGRDGSLIDLLLYELEAAPALPLFIPLPHNTLLSKQCADFMQHPDIHSSPKDWAHDH 180 Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244 SER R ETG+SF+ WR ++ +I AL L + ++ ++A +LGY+ + AF MF Sbjct: 181 NKSERTFHRWFKTETGMSFQAWRNRVCIIYALNALKENISITEIAFSLGYEHSAAFTAMF 240 Query: 245 KKGLGQTPGRYIARLTT 261 K +G P + R T Sbjct: 241 SKIMGYPPTHFQKRFHT 257 >UniRef50_Q3JQZ2 Transcriptional regulator, AraC family n=59 Tax=Burkholderiales RepID=Q3JQZ2_BURP1 Length = 450 Score = 229 bits (585), Expect = 7e-59, Method: Composition-based stats. Identities = 78/255 (30%), Positives = 124/255 (48%), Gaps = 6/255 (2%) Query: 5 LNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPP 64 + + P R H + A + P H H QL A G + + WMVPP Sbjct: 180 DVPSEFAPTRSH--PMRVRARAIAAGMRVPPHAHAWAQLAYASRGVLRLATAGSTWMVPP 237 Query: 65 QYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTT 123 A+W+P + H + +A L L+++ SAV C +++S L RELI+ L R+ Sbjct: 238 SRAIWVPPRIAHEVVIVEDAYLRTLYVDESAVPGGLDACRVVEVSGLLRELIVALEARSL 297 Query: 124 TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183 + R L +++ DEL + L +P+ + ++R + E + P + +L WA Sbjct: 298 NR---TRERLLAELVLDELTRAEPLPLAVPMPTEKRLRALCEAVLAHPAQGESLEHWAAG 354 Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITM 243 S R +ARL +E +SF QWRQQ L A+ L +G + +A+ LGY S +AF M Sbjct: 355 VGASTRTIARLFKQELSVSFSQWRQQALLARAIPLLNQGRPLSHIANELGYQSQSAFSAM 414 Query: 244 FKKGLGQTPGRYIAR 258 F++ G +P +I R Sbjct: 415 FRRAFGASPRAFIQR 429 >UniRef50_A9ISK4 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria RepID=A9ISK4_BORPD Length = 393 Score = 229 bits (584), Expect = 9e-59, Method: Composition-based stats. Identities = 83/270 (30%), Positives = 130/270 (48%), Gaps = 3/270 (1%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 M L + + +G + +H H +GQL+ +L G ++ + LW+ Sbjct: 122 MPEPLLPLHRAQSPCGPPLIAVAASGPRPRATGMHHHARGQLLGSLRGLLSVGTGDGLWV 181 Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLAN 120 VP A+WIP G+ H+ + ++ P A +P C + S L R +L A Sbjct: 182 VPAAQAIWIPPGMPHNLRSHGPFAGWSAYLAPQACAGLPDAVCAMPCSELLRATVLRAAA 241 Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180 R+E RL V+ DE+ P+ LP+ P++ + + +A P L W Sbjct: 242 --GNSRSEAANERLAGVILDEIHALPRSAPGLPMPRDPRLLRIAQALADEPGNPRRLEDW 299 Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240 A + AM+ R L R +ETGL F WRQ+L+L+ AL+ L G V VA LGYD+ +AF Sbjct: 300 ARWAAMAPRTLMRRHQQETGLPFGDWRQRLRLMRALEMLAAGRPVTTVALDLGYDNVSAF 359 Query: 241 ITMFKKGLGQTPGRYIARLTTVSPQSAKPD 270 I MF++ G TP RY + + P ++ P+ Sbjct: 360 IAMFRRAYGTTPARYFDQSRPLPPGASAPE 389 >UniRef50_A5V470 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V470_SPHWW Length = 261 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 72/249 (28%), Positives = 110/249 (44%), Gaps = 1/249 (0%) Query: 14 RHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGG 73 H + + + H+HR+GQLI A G + + +W+ PP+ AVW PGG Sbjct: 10 EHVDRPIVAVGNEYPPAFELDWHRHRRGQLIYAARGVVVVSTAQGVWVAPPERAVWTPGG 69 Query: 74 VEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTR 132 V H+ ++ + IEP A ++ +++SPL R L+ Sbjct: 70 VSHAVRMVGAVSTRSVLIEPDAHGSLGDANKVIQVSPLLRSLLAAACEIDPEYDVAGRDG 129 Query: 133 RLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192 ++ +L EL + P L +P +I + P + W+ M R Sbjct: 130 MVMALLLAELARAPSVSLAVPFPKKAEIARKCQAFLDAPSPHDTIDMWSAELGMGRRAFT 189 Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252 RL ++TGLSF WRQQ L++AL L G+ V +A LGY+S AF TMFK+ G P Sbjct: 190 RLFRQQTGLSFGAWRQQACLLIALPRLAAGEAVTTIALDLGYESPAAFTTMFKRLAGVAP 249 Query: 253 GRYIARLTT 261 Y + Sbjct: 250 SHYQSAGRA 258 >UniRef50_B1JGH9 Transcriptional regulator, AraC family n=26 Tax=Enterobacteriaceae RepID=B1JGH9_YERPY Length = 261 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 70/239 (29%), Positives = 116/239 (48%), Gaps = 1/239 (0%) Query: 20 VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79 ++F A H H GQLI G + ++ ++ PP++ VW+P G+EHS+ Sbjct: 17 LSFRCEAFNANTEFLPHTHPFGQLICVKSGVLAMSIGGQRFLAPPEFIVWVPAGMEHSSY 76 Query: 80 VTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL 138 + I T +P + + +SP+ ++ R RRL VL Sbjct: 77 NRKPMHFRAIDIALDFCTELPASPGLMNVSPIFNAIVEDCFTRDLLMPETQQDRRLAHVL 136 Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198 D+L P Q+ +LP S + ++ + + P + +L WA +ER L+R +E Sbjct: 137 IDQLKVSPVQRTYLPTSQDKLLSPILAALERCPADSTSLALWAKRVYTTERTLSRRCQQE 196 Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 G++F +WRQ+L+ + A+ L +G TV VA +GY S +AFI MF++ G TP R+ Sbjct: 197 LGMAFSEWRQRLRFLHAISLLEQGKTVNSVALDVGYSSASAFIAMFQQISGTTPERFRR 255 >UniRef50_C4XL68 AraC family transcriptional regulator n=2 Tax=Desulfovibrio RepID=C4XL68_DESMR Length = 350 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 76/243 (31%), Positives = 108/243 (44%), Gaps = 1/243 (0%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 V A + H H GQL A G I T + + PP+ AVW+P G+ H Sbjct: 14 PRLVFGRSEALPAASLARAHSHPFGQLSYAGEGVIEVTTPVSSHVAPPRRAVWVPPGLLH 73 Query: 77 SNQVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135 T A + L+I P C L+++ L RELIL A + RL Sbjct: 74 EVTTTRPAAMRSLYIRADQTIFCPPRCLVLRVTRLARELILAAAALPPAYDEDGSAGRLA 133 Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 +VL D+L P+ L LP + P + + + P + + A MS R LAR Sbjct: 134 RVLLDQLAGLPEADLSLPWPADPALAALCRELRDAPDDGRDMDALARQAGMSGRTLARRF 193 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 +TGL F WR++ +L+ AL L GD V A GY S +AF+ F+ G TPG + Sbjct: 194 EAQTGLRFGAWRRRQRLLAALGRLEAGDNVTTAALESGYASVSAFVAAFRDMFGATPGAF 253 Query: 256 IAR 258 + + Sbjct: 254 LRQ 256 >UniRef50_C6RQZ7 Transcriptional regulator, AraC family n=1 Tax=Acinetobacter radioresistens SK82 RepID=C6RQZ7_ACIRA Length = 254 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 1/241 (0%) Query: 19 AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78 V + TD H+H + QL+ L G I +W++PP +WIP HS Sbjct: 11 PVYAYAQSYTDGYVEGTHRHDRIQLLHTLSGVIHVRTSEGIWVIPPSKGIWIPENKRHSI 70 Query: 79 QVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137 ++ N E +F++P + T C + I L ELI RL+++ Sbjct: 71 KIFGNVEARGIFVDPFARADFNTQCSVVAIPKLLSELINQAVQIKEEILPHTRNERLLEL 130 Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197 + DEL + LP + ++ + E + L A A++ + L+RL K Sbjct: 131 ILDELRFLEEIPFRLPEAKSEILKEICENIKADLSATNHLEMVAKQHALNSKTLSRLFQK 190 Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 E ++F W +Q +L+ AL L + +A LGY+S +AF MFK+ +G TP YI Sbjct: 191 ELNMNFSVWLKQAKLLQALTDLEMRKPILNIALDLGYESPSAFSYMFKRQMGMTPTEYIK 250 Query: 258 R 258 R Sbjct: 251 R 251 >UniRef50_A7K1S8 Transcriptional regulator AraC family protein n=4 Tax=Vibrionaceae RepID=A7K1S8_VIBSE Length = 264 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 1/234 (0%) Query: 27 GTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL 86 ++ H H +GQL+ G I + W++PP A WIP G HS + + Sbjct: 29 HLEQRPHNWHSHHRGQLLCIDEGLIQVKTDEGAWILPPHRAGWIPPGAMHSVYFCGSLKG 88 Query: 87 CFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 L P + P C +++S + + L + + + T + R++ V+ DE+ Sbjct: 89 RSLLFTPESCERFPMRPCVIQMSDVLKALSVRASIWSKTDELSIQSLRILAVISDEIVNS 148 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 P + LH+P+ P+++ + + + P ++ WA A+S R L RLI E +SF + Sbjct: 149 PHESLHIPLPRDPRLQKVTQAILIDPNSKHSVEHWAKIGAVSSRTLRRLIRSELNMSFSE 208 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 WRQQ LI +L+ + +G++V VAH LGY + + FI MF++ G +P RY + Sbjct: 209 WRQQALLIHSLEMMARGESVGAVAHALGYSTPSNFIAMFRRVYGDSPTRYFSSR 262 >UniRef50_A1TK09 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria RepID=A1TK09_ACIAC Length = 276 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 79/251 (31%), Positives = 121/251 (48%), Gaps = 1/251 (0%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 +V + + P QH GQ + G I TV++ + PP + VW+P G EH Sbjct: 26 PDSVTVKVVQLPEGADFPTEQHPWGQFVYPRAGVIELTVKSNRYAAPPDFGVWLPPGTEH 85 Query: 77 SNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135 + L I+ +P L +S + + + L L R + P RL+ Sbjct: 86 VARADGETSYFVLDIDADLCARLPRRASVLSVSAIAKAVFLDLQKRQVRKPQSPEDVRLM 145 Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 +VL D+L LP+SS +R ++E + K P + L +WA + +ER LAR Sbjct: 146 EVLIDQLSASVPVDSFLPMSSDAALRNVLEALCKNPGDSRTLVEWARYVHSTERTLARRC 205 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 ++ G++F +WRQ+L+L A L G VQ VA LGY +T+AFI MF+K +G TP + Sbjct: 206 TRDLGMTFLEWRQRLRLSRAFAMLADGLAVQVVAQQLGYGTTSAFIAMFQKTIGTTPNTF 265 Query: 256 IARLTTVSPQS 266 RL + Q Sbjct: 266 RGRLRDGAEQR 276 >UniRef50_Q5E435 Transcriptional regulator, AraC family n=3 Tax=Vibrionaceae RepID=Q5E435_VIBF1 Length = 271 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 68/263 (25%), Positives = 113/263 (42%), Gaps = 3/263 (1%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPV--HQHRKGQLILALHGAITCTVENAL 59 + + + P H E + H H GQL L G + V+ Sbjct: 8 IANMTDKKFLPQLDENLPTDVFFHYFFLEAKTETLSHSHPWGQLHLIKQGRLEMEVDKQK 67 Query: 60 WMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTL 118 P YA+W P + H + E C + IE +PT+ C ++PL R ++ L Sbjct: 68 MFCPANYAIWTPAHLLHRAFNHNDVEYCAINIEFELSQKLPTSACMFPLTPLLRAIVDDL 127 Query: 119 ANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALG 178 R TT+ + L VL + L + + +LP + + ++ + + P + +L Sbjct: 128 VERQTTEVLSTEDKYLSHVLIERLSKTNPIENYLPFTDDKLLAPILMQLQENPADDSSLE 187 Query: 179 QWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTT 238 WA +ER LAR KE +SF WRQ+ +L A+ L ++ ++A+ LGY + Sbjct: 188 IWAKRVFSTERTLARRFQKELKMSFNDWRQRAKLAKAMVLLKDAISINEIAYQLGYSQGS 247 Query: 239 AFITMFKKGLGQTPGRYIARLTT 261 +FI MF+K G TP ++ Sbjct: 248 SFIKMFRKHTGVTPEQFRKEQQG 270 >UniRef50_Q7MFB7 AraC-type DNA-binding domain-containing protein n=32 Tax=Gammaproteobacteria RepID=Q7MFB7_VIBVY Length = 287 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 75/245 (30%), Positives = 120/245 (48%), Gaps = 1/245 (0%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 + V + H H GQ+ L G + + ++ PP A+W+P G+ Sbjct: 42 PPSDVFMNFEEFLSNTETREHSHTWGQVQLISGGILEMEAQGTRFLAPPHLAIWVPPGIM 101 Query: 76 HSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134 H + E C L I P C ++++P+ +I R E +RL Sbjct: 102 HRSFNRRPLEYCSLNIAKQLTDKFPGKTCLIQVTPIVSAIIDDFRLRDINVATEESDKRL 161 Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 +QVL D+L + Q LP S H + ++ + + P + +L +WA +ER LAR Sbjct: 162 VQVLLDQLATKETQHHFLPSSDHKYLAPILAHVEENPTDTTSLSEWAEKVHTTERTLARH 221 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 E G+SF +WR +++ + +++ L KG TV++VA TLGY+ + FI+MFKK GQTP + Sbjct: 222 CQSELGMSFTEWRLRVRYLYSMELLRKGQTVKEVALTLGYNQASPFISMFKKYSGQTPEQ 281 Query: 255 YIARL 259 Y RL Sbjct: 282 YKNRL 286 >UniRef50_Q0KFJ5 Transcriptional regulator, AraC-family n=11 Tax=Proteobacteria RepID=Q0KFJ5_RALEH Length = 291 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 79/246 (32%), Positives = 114/246 (46%), Gaps = 2/246 (0%) Query: 13 DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72 DR A + HQH QLI A+HG + W+VPP +W+PG Sbjct: 47 DRSPLPVTAMAADY-LPGHVTNPHQHPHAQLIHAVHGVMVVATTEGQWIVPPTRGMWMPG 105 Query: 73 GVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131 G H ++ ++ +I P A +P C L IS L RELIL + Sbjct: 106 GTTHWIRMVGRVQMRTAYIRPDAAPDLPQRCTVLGISALLRELILAAIDIPLPYAPGTRG 165 Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191 RL+++L DE+ P LHLP + +R + + + P L W + + + Sbjct: 166 ARLMRLLLDEVMLVPSLPLHLPRPADDSLRQICDAITGAPDTALTLADWGSRLGLDPKTI 225 Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251 R +ETG++F QWRQQ +L+ AL+ L G V VA LGYDS +AF TMF++ G Sbjct: 226 QRRFARETGMTFGQWRQQARLLAALEKLAAGSKVVDVALDLGYDSPSAFATMFRRQFGVP 285 Query: 252 PGRYIA 257 P + Sbjct: 286 PSAFFR 291 >UniRef50_A3D530 Transcriptional regulator, AraC family n=12 Tax=Gammaproteobacteria RepID=A3D530_SHEB5 Length = 283 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 81/269 (30%), Positives = 125/269 (46%), Gaps = 3/269 (1%) Query: 5 LNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPP 64 L + V E H H +GQL+ A G + ENA+W+VP Sbjct: 11 LTPSDVAFITDANRPVLTHTRNMAAEAGIEPHSHPRGQLLWAAKGLLRVRSENAVWVVPS 70 Query: 65 QYAVWIPGGVEHSNQVTANAELCFLFIEP--SAVTMPTTCCTLKISPLCRELILTLANRT 122 +AVWIP + H +A ++I+P ++ T + ++ L REL+L L + Sbjct: 71 THAVWIPCNLPHQVNSETHAHTRNIYIDPSYDVRSLDTQVVMVTMTALMRELVLKLCESS 130 Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182 + RL V DEL HLP S P++ +++ + + P L + A Sbjct: 131 HLMNS-GQLHRLGLVAIDELETLDSLDAHLPAGSDPRLSRLIQKLIRHPTVNYTLTELAE 189 Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242 S R + RL ETGL++RQWRQ+ +L+ +L+ L +G++ +VAH+LGY S ++F Sbjct: 190 MGGASVRTIERLFKAETGLTYRQWRQRFRLLNSLESLSQGESTTRVAHSLGYLSVSSFSA 249 Query: 243 MFKKGLGQTPGRYIARLTTVSPQSAKPDP 271 FK G TP Y S + PDP Sbjct: 250 AFKMQFGCTPQDYPQHKPMKSKVNWFPDP 278 >UniRef50_Q1ZB18 Transcriptional Regulator, AraC family protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1ZB18_PHOPR Length = 259 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 76/245 (31%), Positives = 120/245 (48%), Gaps = 2/245 (0%) Query: 14 RHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGG 73 + A + + H H GQ A+ G + ++ PPQYA+W+P G Sbjct: 15 QLPRPVYARSENWDHSGTQTLWHSHAWGQWSYAIKGVLVVHTHAGRFVAPPQYAIWVPEG 74 Query: 74 VEHSNQVTANAELCFLFIEP-SAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131 VEH + A++ L+I S + + C ++S L +ELIL + + Sbjct: 75 VEHQVISSGAAQMRSLYIRTGSLINLCWHNACVCEVSSLAKELILRFGCFDSEYKLNGKE 134 Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191 RL VL D L PQ Q LP+ S ++ + + + E + Q +S R++ Sbjct: 135 NRLANVLLDTLDDLPQAQTQLPMPSDKRLLAIFDYLQVHTGEQINIDQIGHKVGLSGRSV 194 Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251 +RL +ETGL+F+QWRQ+L+L+ AL L + V +VA GY+S +AF+ F K G+T Sbjct: 195 SRLFKQETGLTFQQWRQRLRLLSALNLLEQAMPVTQVAMECGYESLSAFVAAFGKQFGET 254 Query: 252 PGRYI 256 PG+Y Sbjct: 255 PGKYF 259 >UniRef50_B5EUU3 Transcriptional regulator, AraC/XylS family n=29 Tax=Gammaproteobacteria RepID=B5EUU3_VIBFM Length = 260 Score = 226 bits (576), Expect = 8e-58, Method: Composition-based stats. Identities = 66/251 (26%), Positives = 118/251 (47%), Gaps = 1/251 (0%) Query: 8 NGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYA 67 + + D A I A S +H H+KGQL+ A G ++ + +++ ++PP A Sbjct: 6 DETKFDADKLPADVIGIAADVGRHDSGMHYHQKGQLLYAPEGCMSFALSHSMCVLPPTKA 65 Query: 68 VWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRA 127 VWIP H +T L+ + P +++ L R LI +A + Sbjct: 66 VWIPANTPHRAFMTNVVAYRSLYFDCDKFPCPEDIVMIEVDELLRALINKMAMWPWD-KP 124 Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187 + T + ++ + QQ LP+ + ++ T E + K L + S Sbjct: 125 KSETLHTTALFWESFYEAHQQPFSLPLPTGKRLITFSEQVQKPDFLAPDLQTLSKKIGAS 184 Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247 + + RL KETG+S+++W+QQ +++ +++ L + V VA L + S +AFI+ FKK Sbjct: 185 SKTITRLFKKETGMSYQEWKQQWRVLKSIELLCENTQVSDVAFQLDFSSDSAFISFFKKQ 244 Query: 248 LGQTPGRYIAR 258 +GQTP +I + Sbjct: 245 VGQTPLAFIKQ 255 >UniRef50_Q2KXY1 AraC-family transcriptional regulator n=5 Tax=Proteobacteria RepID=Q2KXY1_BORA1 Length = 274 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 109/261 (41%), Gaps = 3/261 (1%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 PD + + + + H H Q++ A+ G + T E + + P A W+P Sbjct: 14 PDVLSPSPMTMRVQSIGARNYFAAHTHEWHQVVYAVSGVLMVTAEGRSFAISPNQAAWVP 73 Query: 72 GGVEHSNQVTANAELCFLFI--EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129 G EHS AE L++ P +S L + L++ A Sbjct: 74 SGTEHSVGSFLGAEYRSLWLADHPGGTLSKGGVAVFGVSALLKALLVEAATLQGNPDESG 133 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 R+ +++ D+L + L L + +RT+ E + P + W MS R Sbjct: 134 YFGRIYRLVLDQLCRASPISLVLAWPASAALRTLCETLYNQPADPRGPDDWGRELGMSGR 193 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 LAR ETGL+ R WR+QL+L A++ L G V +A LGY S ++FI F+ + Sbjct: 194 TLARKFFAETGLTLRDWRRQLKLFRAIELLESGLDVTAIALELGYGSASSFIFAFRSAMK 253 Query: 250 QTPGRYIARLTTVSPQSAKPD 270 +P Y R+ P A + Sbjct: 254 CSPMAY-KRIRARDPAGAPGE 273 >UniRef50_C6CCZ8 Transcriptional regulator, AraC family n=3 Tax=Dickeya RepID=C6CCZ8_DICDC Length = 282 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 106/256 (41%), Gaps = 2/256 (0%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 +V F + T HQH + + A G + +E +VP Y VWIP V H Sbjct: 19 PRSVYFRTYPLTKGTQVAQHQHPFVEFLYAREGGMRMEIEGKTLIVPVLYGVWIPANVPH 78 Query: 77 SNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTL-ANRTTTQRAEPMTRRL 134 T+N L L++EP + + IS RE I + ++ Sbjct: 79 QILATSNVLLESLYVEPEYAAIDHDSSKVVVISDFVREFIHYATEHIPEQYDEAGDDGKM 138 Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 + VL L Q P LP + + + + P + WA MS R +R Sbjct: 139 VDVLTTLLRQLPDAGFSLPWPESVVLVRVCRDIQQAPDAAHGIEAWAARTGMSVRTFSRR 198 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 KETG+SF +W+++L+L+ ++ L +V +VA LGY ST +F F++ G P R Sbjct: 199 FRKETGVSFSEWKKRLRLLESIIMLKDNRSVTQVALDLGYSSTASFTFAFRQMFGVPPTR 258 Query: 255 YIARLTTVSPQSAKPD 270 Y + + P Sbjct: 259 YQSAAHQSATSPPPPA 274 >UniRef50_B7UVC2 Probable transcriptional regulator n=6 Tax=Pseudomonas aeruginosa RepID=B7UVC2_PSEA8 Length = 260 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 83/242 (34%), Positives = 131/242 (54%), Gaps = 3/242 (1%) Query: 19 AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78 AV +H+H GQL+ A G + + E ++VP Q A+WIP V H+ Sbjct: 19 AVYLRAFEMPAGHRVEMHEHPWGQLMYAASGTLRASTERHSYLVPAQRALWIPPRVRHAA 78 Query: 79 QVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL 138 + L+++ ++P C L++S L REL+L A RL+QV+ Sbjct: 79 EACNPVLFRSLYLD---RSLPGGCRVLEVSGLLRELLLRAAEFPREYPPGGEAERLMQVV 135 Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198 DE+ + + L+LP+ P++R + + + P + + WAG S R LARL ++ Sbjct: 136 ADEVGRLREAPLNLPLPGDPRLRRITDALQADPADPRGISDWAGLVGASRRTLARLFREQ 195 Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 T LSFR+WRQ+L+L+ A+ L +G +V +VA LGYDST+AFI++F++ GQTPG + Sbjct: 196 TQLSFREWRQRLRLLNAVAALEEGASVTRVASDLGYDSTSAFISLFQRHFGQTPGCFARS 255 Query: 259 LT 260 L Sbjct: 256 LR 257 >UniRef50_C7MAZ5 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=2 Tax=Actinomycetales RepID=C7MAZ5_BRAFD Length = 261 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 81/250 (32%), Positives = 122/250 (48%), Gaps = 3/250 (1%) Query: 24 IHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTAN 83 IH + +P H H +G L+ G ++ E+ W+ PP A WIP G H ++ Sbjct: 14 IHLLGHDERTPSHVHEQGHLVYPASGVLSIVTEDGSWIAPPNRAAWIPAGSFHQHRAHGA 73 Query: 84 AELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDEL 142 ++ +F+ +A + P L ++PL RE TLA + R RL +V+ D+L Sbjct: 74 TDMRIVFMADAAAGLLPAHPSVLAVTPLARE--ATLALTSDVPRTAESRERLRRVIIDDL 131 Query: 143 PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202 P+Q LHLP ++R + ++ + + L Q ER L+RL + TG+S Sbjct: 132 TAAPEQPLHLPEPRDERLRALTHLVEQEMEDPATLEQLGRRIGAGERTLSRLFQQTTGMS 191 Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262 FRQWR QL++ AL L G +V A G+ + +AFI F +GQTPGRY L Sbjct: 192 FRQWRIQLRIHRALLLLTDGLSVVDTATACGWANPSAFIDAFTALVGQTPGRYQRSLRGA 251 Query: 263 SPQSAKPDPR 272 S + PR Sbjct: 252 SSPLPETPPR 261 >UniRef50_C0YIN0 AraC/XylS family transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YIN0_9FLAO Length = 260 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 6/258 (2%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHR-KGQLILALHGAITCTVENAL 59 M ++ D HE V S H H K QL+ A G +T T + Sbjct: 1 MALLKQTEDFDADSIHEQVVGIASDMVM--HDSGFHFHTTKAQLLYAPSGCMTVTTSDRQ 58 Query: 60 WMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT--MPTTCCTLKISPLCRELILT 117 ++PP +WIP H ++ + S M + L ++PL +E+I Sbjct: 59 LILPPFRMLWIPAHEVHRVNFRNIVAYRSIYFDVSYSRKYMKSDLKVLHVNPLLKEIIER 118 Query: 118 LANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGAL 177 + + T L++V +DE+ + P+++L L + + + E L Sbjct: 119 ICFWEWPALSNDQTN-LLKVFWDEMSKAPEEKLELKMPQDKRFTKIAEEWTLRQSVPPML 177 Query: 178 GQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDST 237 A +E+ ++R+ KETGLS++ WRQQ +L +++ L +G+++ +V++ L + S Sbjct: 178 KDLAQKAGAAEKTISRIFKKETGLSYQDWRQQWRLQRSIELLAEGNSIGEVSYILDFPSD 237 Query: 238 TAFITMFKKGLGQTPGRY 255 +AFI FKK G TP +Y Sbjct: 238 SAFIEFFKKHTGTTPLQY 255 >UniRef50_B1KGB7 Transcriptional regulator, AraC family n=2 Tax=Shewanella RepID=B1KGB7_SHEWM Length = 261 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 66/259 (25%), Positives = 115/259 (44%), Gaps = 2/259 (0%) Query: 1 MMHRLNLNG-YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENAL 59 M + L E + + T H+H GQ + A G + + Sbjct: 1 MPKMIELTPSNESMKPLSRPIVVVNRELFIHSTVKKHRHTWGQFVYASRGVLAVATTVSR 60 Query: 60 WMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTL 118 ++VPP+ VW+ H ++ EL + + + ++ P CC L + + LI+ Sbjct: 61 YIVPPEQGVWVTPNTCHEVTAISDVELTSFYFDNTVLSGFPECCCVLNVEFFLKVLIVES 120 Query: 119 ANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALG 178 + + RL++++ D+L + L LP ++ ++ + P L Sbjct: 121 KSIDGDYEWSGVDGRLLRLIRDKLIVAIKIPLQLPYPKDSRLLAILTQLQLEPSNRNNLV 180 Query: 179 QWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTT 238 QW S R L+RL ETGL++ +WRQ+ + +A+ L G+TV ++ LGY+S + Sbjct: 181 QWGNIVGASARTLSRLFKNETGLTYSEWRQRFNVQVAITKLSSGETVSNISLNLGYESPS 240 Query: 239 AFITMFKKGLGQTPGRYIA 257 +FI MF+K G TPG Y Sbjct: 241 SFIYMFRKLTGVTPGFYSQ 259 >UniRef50_A9ILC9 Transcriptional regulator, AraC family n=3 Tax=Bordetella RepID=A9ILC9_BORPD Length = 308 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 69/232 (29%), Positives = 106/232 (45%), Gaps = 1/232 (0%) Query: 29 DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88 + P H+H KG L+ G + + + P W+P G+ H +A F Sbjct: 77 RGIAVPAHRHDKGMLLAVREGVSVVRSDGEVLTMTPGRLGWMPPGMLHEAHWFGDARGLF 136 Query: 89 LFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147 L++ A +P C PL L+ LA ++ T RL +VL EL PQ Sbjct: 137 LYVRADACDSLPAQACAWASGPLVEALLQRLAGIPPDEQNLAHTLRLFEVLVAELRILPQ 196 Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207 L LP+ ++ + + P + + WA MS R L R ETG++ +WR Sbjct: 197 ASLPLPMPRDHRLHELATTLLDRPDDARGIEAWARRVNMSSRTLMRRFRAETGITLGRWR 256 Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 QQ +L+ +L+ L G V + A +GY+S +AFI+ F+ G TP +Y AR Sbjct: 257 QQARLLRSLEWLAAGKPVTEAALAVGYESISAFISSFRNAYGVTPSQYFARH 308 >UniRef50_B2UKA3 Transcriptional regulator, AraC family n=8 Tax=Betaproteobacteria RepID=B2UKA3_RALPJ Length = 265 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 1/257 (0%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 + A F E H H GQL G + VE P +Y +W+ Sbjct: 9 DLRVPTGAPFYFRYDHFQPETDIEPHTHPWGQLNRIALGLMEVVVETRRLTAPAEYLIWV 68 Query: 71 PGGVEHSNQVTANAELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129 P HS + + +++ EP A +P C ++ +PL R L+ R + A+ Sbjct: 69 PANQPHSASIRQATDFLSVYVAEPLARRLPPMACLIQQTPLVRALLEDFQARRISVMADD 128 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 R ++L + L + +LP S ++ +++ + P + L WA +ER Sbjct: 129 WDLRQFELLVEMLGRAGHTDSYLPDSKDRQLEPILQAIRLFPADNTPLKTWAERVHSTER 188 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 LAR E G+SF QWR +++L+ AL L + ++Q +A LGY + +AFI MF+K +G Sbjct: 189 TLARRFQHELGMSFVQWRNRVRLLRALVWLKEDCSIQDIALALGYGTPSAFIAMFRKQIG 248 Query: 250 QTPGRYIARLTTVSPQS 266 +P RY ++ ++ Sbjct: 249 FSPQRYRRQMCGEVARA 265 >UniRef50_B1JZJ0 Transcriptional regulator, AraC family n=2 Tax=Burkholderia cenocepacia RepID=B1JZJ0_BURCC Length = 261 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 82/259 (31%), Positives = 117/259 (45%), Gaps = 3/259 (1%) Query: 2 MHRLNLNGYEPDRHHEA-AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 M L Y R VA + HQHR GQL+ A G + W Sbjct: 1 MKAFLLKRYPLARVPLPRQVAATLVNYRQGERVTWHQHRHGQLVFAAKGVVRVLTPARTW 60 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLA 119 +PP AVW+P V+H + LC +++EP P + +S L REL LT+ Sbjct: 61 TLPPSRAVWLPSDVDHELHAVGDTALCSVYMEPEVFPWPWEEPAVIAVSALLRELALTVV 120 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH-LPVSSHPKIRTMVEMMAKGPVEWGALG 178 + T A +L L + P +P+ ++ + E M P L Sbjct: 121 DGADTYTATSRAGLAASLLMKVLAETPSLAEPGVPLPRDERLLKLCEHMMNDPASDLTLD 180 Query: 179 QWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTT 238 W F S R LAR + ETGL+F WRQQ+++ A+ L G +V +VA LGY S + Sbjct: 181 FWGEQFGASGRTLARRLHAETGLTFVAWRQQMRVAEAMTRLALGQSVARVAKDLGYRSAS 240 Query: 239 AFITMFKKGLGQTPGRYIA 257 AFI MF++ G++P RY+A Sbjct: 241 AFIVMFRRITGESPQRYLA 259 >UniRef50_A6V4X5 Probable transcriptional regulator n=7 Tax=Pseudomonas aeruginosa RepID=A6V4X5_PSEA7 Length = 254 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 67/248 (27%), Positives = 106/248 (42%), Gaps = 1/248 (0%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 A F + + H H GQL G + E +PP+ WIP G Sbjct: 5 PLPAPLFALRLDRATSRTAPHSHACGQLYCLERGLLVVEDERGRQALPPRQIAWIPPGHR 64 Query: 76 HSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134 H+ +++ S +P + L S ++ L Sbjct: 65 HAAHSHGALLGWSAYLDTSHCHALPASPGVLACSDFVALIVERATRWPAGSAWSAERENL 124 Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 ++VL DEL Q+ LP P++R + E + P + +WA + +S R+L+RL Sbjct: 125 LRVLLDELRHAVPQRTRLPYPGDPRLRRIAEALLANPGDPRPAAEWARWAGLSSRSLSRL 184 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 ETG+SF QWRQ +L A++ L G V +VA +LGY+S ++F + F+ G+TP Sbjct: 185 FGTETGMSFAQWRQLARLHAAVERLAAGQAVGEVAWSLGYESPSSFASAFRAVFGETPSG 244 Query: 255 YIARLTTV 262 Y +R Sbjct: 245 YSSRAAEA 252 >UniRef50_Q7CRR0 Transcriptional regulator, AraC family n=4 Tax=Rhizobiaceae RepID=Q7CRR0_AGRT5 Length = 284 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 67/254 (26%), Positives = 117/254 (46%), Gaps = 2/254 (0%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 D +E +A +P H H + Q+ A G + + + WM+PP + + IP Sbjct: 24 IDGTNEPVLALH-RVYPTGHRTPPHSHSRVQIWCARQGVVLVSTADGRWMIPPGHGLLIP 82 Query: 72 GGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131 G++H ++ +N E+ +++ P + ++I+ L LI L A Sbjct: 83 AGLQHEAEIISNVEMHSIYVHPELFQA-ESPKVVEITDLASSLISELLAEEHQPSAFHRQ 141 Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191 + +L DE+ + P++ L LP + ++ + + PV + +WA ++S R+ Sbjct: 142 GLVRALLLDEVNRLPERPLGLPFPDNQRLAALCRDFLRKPVARVEIDEWAAAMSISRRSF 201 Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251 RL +E G+SF WRQQ + +L L G+ V VA GY++ AF TMF++ LG + Sbjct: 202 TRLFRRELGVSFVTWRQQACIFASLPRLAAGEAVTNVALDAGYENIPAFTTMFRRMLGSS 261 Query: 252 PGRYIARLTTVSPQ 265 P Y S Sbjct: 262 PRAYRQAARQRSAA 275 >UniRef50_Q39NN6 Transcriptional regulator, AraC family n=9 Tax=Betaproteobacteria RepID=Q39NN6_BURS3 Length = 266 Score = 223 bits (569), Expect = 5e-57, Method: Composition-based stats. Identities = 79/250 (31%), Positives = 129/250 (51%), Gaps = 1/250 (0%) Query: 7 LNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQY 66 + P V+ + H+HR+ QL+ A+ G + E A W+VPP Sbjct: 15 PGAHLPFESTPMPVSAMAATYAHGTSIAPHRHRRAQLLYAIEGVMHVQSEGASWVVPPTR 74 Query: 67 AVWIPGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQ 125 VW+ G++H+ Q++ + ++ +F+EP AV +P C +++ PL RELIL + Sbjct: 75 GVWLEAGLDHTVQMSGDVQMRTVFVEPGAVEHLPARSCVVEVHPLLRELILAAVDVPLDY 134 Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185 L+ +L E+ P L+LP P++RT+ + + P + + +WA Sbjct: 135 APGSRHDHLMHLLLAEVTVAPLLPLYLPWPHDPRLRTICDALVAAPDDLRTIAEWADLLG 194 Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245 +S R L R +ETGLSFR+WR+Q +L++AL+ L G+ V VA GY S +AF MFK Sbjct: 195 LSVRTLHRAFRRETGLSFRRWREQARLLLALKRLAHGEKVLTVAMDHGYSSQSAFSAMFK 254 Query: 246 KGLGQTPGRY 255 + G +P + Sbjct: 255 RHFGVSPSAF 264 >UniRef50_A6V354 Transcriptional regulator, AraC family n=3 Tax=Pseudomonas RepID=A6V354_PSEA7 Length = 244 Score = 223 bits (569), Expect = 5e-57, Method: Composition-based stats. Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 1/233 (0%) Query: 26 AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85 D H H + QLI A+ G + W+VP +A+W+P EH +++ + Sbjct: 9 DHHDGEEILPHCHAQAQLIHAISGVMLVGAARRNWVVPAGHALWVPPNTEHQIRMSGSVR 68 Query: 86 LCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ 144 + LF+ + C + +SPL REL++ + + R + ++L EL Sbjct: 69 MRTLFMPAATWPRDGEQCQVIAVSPLLRELLVAASEMHLGDSSAQRRRCIHELLLVELDA 128 Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204 +HL + P++ + + P E + WA MS R LARL +E G+SF Sbjct: 129 AQTIGIHLVMPRDPRLLRLCSQVIGTPAEETRMEDWARQLNMSSRTLARLFQRELGMSFG 188 Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 WR + +++++LQ L G +V +VA GY S +AF FK+ LG +P Y A Sbjct: 189 DWRTRARMVLSLQRLSAGASVLEVALEHGYQSPSAFSQTFKRTLGHSPSHYQA 241 >UniRef50_B7GXZ6 Bacterial regulatory helix-turn-helix protein, AraC family protein n=12 Tax=Acinetobacter RepID=B7GXZ6_ACIB3 Length = 262 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 70/243 (28%), Positives = 121/243 (49%), Gaps = 6/243 (2%) Query: 20 VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79 V + +P H H + Q + A G I N +W+VPP A+WIP VEHS Sbjct: 14 VIGLSSEHSYREITPTHTHTRAQFLYASTGNIQVFTPNHVWIVPPMCALWIPANVEHSVI 73 Query: 80 VTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANR-----TTTQRAEPMTRR 133 ++ +L +E +A M C +++S L EL++ L T ++ ++R Sbjct: 74 SLSHVKLNTALVEVNAAARMGQHCFIIRVSNLLHELLIRLNEIEREETPNTATSQELSRS 133 Query: 134 LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193 L ++F+E+ + + +P ++ + + + P L WA S R L R Sbjct: 134 LQILIFEEIQRANLLPIQIPWPKDKRLLKICQELLHTPNHSRDLTDWADDIGASSRTLMR 193 Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253 + KETGLS+R W QQ+ + +AL + G ++ +++ +LGY + +AF MFK+ LG+TP Sbjct: 194 MFQKETGLSYRAWVQQMHIALALSKIANGKSIAQISESLGYTNPSAFSAMFKRHLGKTPQ 253 Query: 254 RYI 256 ++ Sbjct: 254 QFR 256 >UniRef50_A8GH45 Transcriptional regulator, AraC family n=18 Tax=Enterobacteriaceae RepID=A8GH45_SERP5 Length = 257 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 71/257 (27%), Positives = 115/257 (44%), Gaps = 2/257 (0%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 M + F H+H GQL+ G + + ++ Sbjct: 1 MPEIRHYPEALIPAPRPVQ-FRCEEFNARTEFQPHRHSWGQLMWVKAGVMVLRIGGQRFL 59 Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFIE-PSAVTMPTTCCTLKISPLCRELILTLAN 120 PP++ +W P +EHS A+ + I P MP C + ++P+ R + Sbjct: 60 APPEFVLWAPAEIEHSCYNQRLAQCRMVDIALPLCAGMPVDPCLVSVTPIFRAIAEDFYA 119 Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180 R RL + L D+L P QQ +LP S + ++E + P + +L W Sbjct: 120 RKQYIPQSKQDLRLCRALIDQLHLSPVQQTYLPSSEDKFLAPVLEALEHCPSDNTSLAAW 179 Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240 A +ER L+R ++ G+SF +WRQ+L+ + A+ L +G TVQ+VA +GY S +AF Sbjct: 180 AARVYTTERTLSRRCQQDLGMSFSEWRQRLRFLHAVSLLEQGKTVQEVALEVGYSSASAF 239 Query: 241 ITMFKKGLGQTPGRYIA 257 I MF++ G TP R+ Sbjct: 240 IVMFQQIAGTTPERFRR 256 >UniRef50_Q7D3B7 Transcriptional regulator. AraC family n=2 Tax=Agrobacterium tumefaciens RepID=Q7D3B7_AGRT5 Length = 264 Score = 223 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 74/254 (29%), Positives = 127/254 (50%), Gaps = 1/254 (0%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 A ++F + + ++ AL G + VE ++ PP YA WIP H Sbjct: 11 PAPLSFRTESYEAGGIFEEKRQPWCKVGYALTGVMEARVEGKRFLCPPHYATWIPADAVH 70 Query: 77 SNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135 + N + ++I+ MP T CTL +SPL + ++ A R T RRL Sbjct: 71 ACHNRENVKFVSIYIDRDLCAGMPETACTLALSPLIKAILADFAERRITVPQTEADRRLA 130 Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 VL D+L P+++ LPVS+ ++ +++ + P + +L +WA +E+ L+R Sbjct: 131 FVLVDQLLNAPRRESFLPVSNDDLLQPVIDALQADPGDRRSLSEWARLLQTTEKTLSRRF 190 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 + G+SF +WRQ+L+L+ +L + G +VQ +A TLGY+S +AFI MF++ G +P Sbjct: 191 LGHLGVSFNEWRQRLKLVASLSLIEDGKSVQSIAKTLGYNSPSAFIAMFRRLTGTSPTNL 250 Query: 256 IARLTTVSPQSAKP 269 + ++ P Sbjct: 251 RSTPARTIKAASTP 264 >UniRef50_C8Q2C9 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8Q2C9_9ENTR Length = 261 Score = 223 bits (568), Expect = 8e-57, Method: Composition-based stats. Identities = 75/243 (30%), Positives = 118/243 (48%), Gaps = 3/243 (1%) Query: 18 AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77 + H H QL+L L G + A W + P A+W+PG V H+ Sbjct: 16 PLLTTREMHYHAGREERWHAHEVAQLVLCLQGVMRVQTHTASWTLTPGRALWLPGTVPHA 75 Query: 78 NQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136 ++ L++EP ++ ISPL + L+ TL +P+ LI Sbjct: 76 LTALSDIRSLSLYLEPVVARAFWPEARSMMISPLLQALMQTLVEIGLQPHPDPLRAELIT 135 Query: 137 -VLFDELPQQPQQQLH-LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 +L DEL + P+ + LP+ + ++ + + + + P L +W S R LARL Sbjct: 136 PLLLDELRRAPEGPVCVLPLPADRRLMNICQQLLQSPASSDTLEEWGSRVGASSRTLARL 195 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 +TG++F QWRQQL+L AL L +G V ++A LGY S +AFI+MF++ LG TP R Sbjct: 196 FRDQTGITFTQWRQQLRLSEALVQLAQGQPVLRIASQLGYQSPSAFISMFRRLLGDTPQR 255 Query: 255 YIA 257 ++ Sbjct: 256 FLR 258 >UniRef50_C5CUS1 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CUS1_VARPS Length = 280 Score = 222 bits (567), Expect = 9e-57, Method: Composition-based stats. Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 7/267 (2%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 + L + Y PD + H + + +HQH QL + G I + ++ ++ Sbjct: 14 VASLTPHLYAPDAV--RPLRAKEHFLSADTFVELHQHPWPQLTFSTRGVIRLSTQDGSYI 71 Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANR 121 VPP AVW+P + HS + +AEL +++ C L+ISPL R L+L L Sbjct: 72 VPPSRAVWVPANMPHSIMLIEDAELRTVYLHAWLGPPWEKCEVLEISPLLRALMLALDTT 131 Query: 122 T-----TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGA 176 A R + +L DEL + Q ++ +P+ S ++R + E + + P + Sbjct: 132 PDGLPPADPHAPQRERMIAPLLVDELERATQIRIDVPLPSDKRLRQLCETLLRNPADRAT 191 Query: 177 LGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDS 236 L + A SER +ARL + G+S++QWRQQ + AL L +G V +VA GY + Sbjct: 192 LAERAAAIGASERTVARLFRDQLGMSWQQWRQQAVMAHALPLLARGMAVSQVAAASGYAT 251 Query: 237 TTAFITMFKKGLGQTPGRYIARLTTVS 263 +AF MFK G++P + + + + Sbjct: 252 DSAFCAMFKAATGRSPTSFQHKKRSAA 278 >UniRef50_D2B3A1 AraC family transcriptional regulator n=5 Tax=Actinomycetales RepID=D2B3A1_STRRD Length = 265 Score = 222 bits (567), Expect = 9e-57, Method: Composition-based stats. Identities = 71/238 (29%), Positives = 115/238 (48%), Gaps = 4/238 (1%) Query: 19 AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78 + + H H QL G ++ V++A W++PP A+W+P GV H Sbjct: 22 VIVVGHFPLSSGQWISPHSHTHHQLAWTRSGVLSVAVDDAYWVLPPTRALWLPAGVVHRT 81 Query: 79 QVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137 T +A LC L++ P T+ T + ++ L LI LA A V Sbjct: 82 GATRDALLCSLYLNPVRCTLNWTEPTAVGVNGLLAHLIAYLAREDLADDARLRAE---AV 138 Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197 + D L P + +P ++R + + + P + +L A +S R L RL V+ Sbjct: 139 VLDLLHPLPALPIDVPRPVDERVRAVADTLLADPSDSRSLEAHARSIGVSRRTLTRLFVR 198 Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 +TGLSF +WR ++L AL L +G V +V+HT+GY + +AF+ F++ +G +PGRY Sbjct: 199 DTGLSFDRWRTHMRLRAALPLLAEGRPVSQVSHTVGYATPSAFLAAFRRTVGTSPGRY 256 >UniRef50_Q7D2T6 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria RepID=Q7D2T6_AGRT5 Length = 215 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 102/215 (47%), Positives = 141/215 (65%), Gaps = 2/215 (0%) Query: 45 LALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCT 104 + L G +TC V + +WMVPP VW+PGG+ HSN TANA L FLFIEP A +P CCT Sbjct: 1 MPLRGGVTCRVPSGMWMVPPHCGVWVPGGMLHSNVATANARLFFLFIEPGAADLPNRCCT 60 Query: 105 LKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMV 164 L +SPL RELI+ LA+++ A+ + +L L + P + LHLP++ P++ + Sbjct: 61 LSLSPLVRELIIELADQSEVATADS--ELMTTLLLSALSRMPVEHLHLPLTDEPRLARIA 118 Query: 165 EMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDT 224 +A P + + QWA AMSE +LARL+ +TGL+F +WRQQLQLI+A++ L G T Sbjct: 119 SELADDPSDRSTMAQWARRVAMSENSLARLVQHQTGLTFGRWRQQLQLIIAIRSLASGAT 178 Query: 225 VQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 VQ+V+ LGY+S +AFITMFKK LG +P RY+ Sbjct: 179 VQQVSGDLGYESVSAFITMFKKALGTSPSRYLRNF 213 >UniRef50_Q01YV9 Transcriptional regulator, AraC family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01YV9_SOLUE Length = 257 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 69/231 (29%), Positives = 105/231 (45%), Gaps = 3/231 (1%) Query: 27 GTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL 86 + H+H QL+ A+ G++T W++PP AV+IP HS ++ + Sbjct: 26 YSSGYQMEEHEHPWRQLLYAISGSMTVYAGRWSWIIPPGKAVFIPADCRHSMRMWGQVAM 85 Query: 87 CFLFIEPSA---VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELP 143 L+ + C L ++PL RELIL + P RL +L DE+ Sbjct: 86 RSLYFPAAWEVSAFASPECFVLSVTPLLRELILRVIEWAALDSRVPEHARLAALLVDEIA 145 Query: 144 QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203 P L LP+ + + + + P +L A A R L RL ETG+SF Sbjct: 146 CAPVTPLLLPLPIDARAAAVAQSVLASPARNDSLDDLARRHATGRRTLERLFRDETGMSF 205 Query: 204 RQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 WRQQ +L+ ++ L +G V + A GY S +A+I FK+ G TPG+ Sbjct: 206 GMWRQQARLLHSVGALAEGKPVTEAALDAGYASLSAYIAAFKRTFGCTPGK 256 >UniRef50_A5F0T8 Transcriptional regulator, AraC/XylS family n=40 Tax=Vibrionaceae RepID=A5F0T8_VIBC3 Length = 263 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 74/247 (29%), Positives = 119/247 (48%), Gaps = 1/247 (0%) Query: 14 RHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGG 73 H + V A + H H GQ+ L G + E+ ++ PP A+W+P G Sbjct: 15 EHPPSDVFMNFEAFLSNTETREHSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAG 74 Query: 74 VEHSNQVTANAELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTR 132 + H + E C L I P +K++ + +I R + Sbjct: 75 IRHRSYNRKPIEYCSLNIASQLTTAFPAKTSLIKVTSIVSAIIDDFRERNINVAQSSEDK 134 Query: 133 RLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192 RL+QVL D+L + Q LP ++H + ++ + + P + L QWA +ER LA Sbjct: 135 RLVQVLLDQLATRETQHHFLPSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLA 194 Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252 R E G+SF +WR +++ + +++ L +G V++VA TLGY+ + FITMFKK G TP Sbjct: 195 RHCQAELGMSFTEWRLRVRYLYSMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTP 254 Query: 253 GRYIARL 259 +Y +RL Sbjct: 255 EQYKSRL 261 >UniRef50_C9NXQ1 Transcriptional regulator AraC family n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NXQ1_9VIBR Length = 243 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 2/232 (0%) Query: 26 AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85 + HQH QL G T + W + P WIP ++H + V A+ E Sbjct: 10 HHPAASETEWHQHEYAQLYWLNKGIFTIETSDQQWTITPACLGWIPPHLQHRSDVVADIE 69 Query: 86 LCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ 144 +++ + + P ++ + L + LI + + + P +R QVL DE+ Sbjct: 70 AVMIYVPLTWLNAFPQQAKVIQSNTLIQALIERITHFDLSAMTAP-QQRQFQVLLDEIHL 128 Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204 P L+LP+ K+R + + + P + + + A F S R L+RL KETG++F Sbjct: 129 APASNLYLPLPKEAKMRQIADTLLATPDDARSQTELAHDFGTSTRTLSRLFKKETGMAFG 188 Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 WRQQ +L+ +L L KG ++ VA + GY +T++FIT FK G TP Y Sbjct: 189 FWRQQARLVSSLPMLEKGLSITYVALSCGYSNTSSFITAFKARFGVTPSVYF 240 >UniRef50_Q4KJ22 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria RepID=Q4KJ22_PSEF5 Length = 262 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 73/257 (28%), Positives = 119/257 (46%), Gaps = 2/257 (0%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 M + +++ + H+H G L + HG + + +M Sbjct: 1 MSKKHIDLLDFHGLPAPVYFRYADFAAHSHALE-HRHPWGCLEYSAHGVMHMEIAGQRFM 59 Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLAN 120 PPQYAVW+P HS + + P +P TL IS + + ++ A Sbjct: 60 SPPQYAVWVPPQTPHSFYTAQPINYRAVLLAPELCAELPAGGSTLAISEILKAILKDFAA 119 Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180 R +RL QVL D+L Q P +LP +S P + +++ + P L W Sbjct: 120 RDVQIPEGEADQRLAQVLLDQLRQAPVHTCYLPYASSPDLLRVLQALQAEPGNNQPLAHW 179 Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240 AG +SER LAR V+E G+SF +WRQ+ + + +++ L ++Q++A +GY S +AF Sbjct: 180 AGLAHVSERTLARQFVRELGMSFGEWRQRQRFLASIEALESSRSIQEIAFDMGYSSASAF 239 Query: 241 ITMFKKGLGQTPGRYIA 257 I MF++ G TP +Y Sbjct: 240 IAMFQRQAGSTPEQYRR 256 >UniRef50_Q2BQ21 Transcriptional regulator, AraC family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQ21_9GAMM Length = 235 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 1/234 (0%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 + P HQH QL+ A G + V +PP+ AVWIP G EH + L Sbjct: 2 PPQHFFPKHQHEWHQLLYATSGVLIVEVLGERLFIPPEKAVWIPQGHEHQVYSEYGSSLK 61 Query: 88 FLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146 L+IE + T LKI+PL ++LIL + + + LI ++ L + Sbjct: 62 SLYIEHSDQFSDWQTSKVLKITPLLKQLILEASTFSVHYSRQGYEAELIALMLASLHRLE 121 Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206 LP + + + +M + P + A ++S+R L R +KETG+S +QW Sbjct: 122 TDHDQLPWPASRDLYRLCQMFYEQPSLRKTTAKLAIELSVSKRTLERKFMKETGMSVQQW 181 Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260 QL+ + +L+ L G ++ +A LGY S+ AFI MF+ G +PG++I Sbjct: 182 LLQLRFLKSLELLSAGYSITHIALELGYGSSAAFIHMFRDKTGVSPGQFIKNAR 235 >UniRef50_UPI00019092C6 AraC family transcriptional regulator n=1 Tax=Rhizobium etli CIAT 894 RepID=UPI00019092C6 Length = 283 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 71/224 (31%), Positives = 103/224 (45%), Gaps = 1/224 (0%) Query: 33 SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92 H+HR+GQL+ A G I T W++PP +WIP GV HS + + L++E Sbjct: 2 IEPHEHRRGQLMNATSGLIVLTTPEGKWVMPPHRGMWIPAGVRHSVRAGGLVRMQSLYVE 61 Query: 93 PSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151 MP C L+I+ R LI + + + ++ L+ + E+ + P L Sbjct: 62 TDRAEAMPVHCQVLEITTFMRSLIGEVVGLSLDTEVDGRSQALMDLTLYEMERLPSLPLS 121 Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211 LP S + P W+ MS R R+ ++TGLSF WRQQ Sbjct: 122 LPFPSDERFAKKCREFVGQPNIHQTTDDWSRELGMSRRAFTRMFRQQTGLSFVGWRQQAC 181 Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 L+ AL L G +V VA LGY++ AF MFK+ G+ P Y Sbjct: 182 LLSALPQLSAGQSVTSVAMELGYENPAAFTIMFKRAFGKPPLAY 225 >UniRef50_D1X8C9 Transcriptional regulator, AraC family n=2 Tax=Streptomyces RepID=D1X8C9_9ACTO Length = 304 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 73/242 (30%), Positives = 115/242 (47%), Gaps = 3/242 (1%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 H+ + H+H Q++ A G +T T W+ P A+W+P G Sbjct: 63 HDPVAPTRTRRLAPGGSIDAHRHDDHQIVYAGRGVLTVTTSAGSWVAPATRAIWVPAGTV 122 Query: 76 HSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134 H+++ +L + + + + T L +SPL REL++ R E RL Sbjct: 123 HAHRAYGELDLHLVGLPVTENPLGLETPTVLAVSPLLRELLIAYTRAEDDDRPE--RARL 180 Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 VL D+L QQ LHLP + P +R + +++ P + L + S+R L+RL Sbjct: 181 RAVLLDQLRASAQQPLHLPTPTTPLLRALCDILRADPADSRTLAELGHLVGASDRTLSRL 240 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 + G++F QWR QL+L AL L + V VAH G+ ST+AFI +F++ G TPG Sbjct: 241 FRSDLGMTFPQWRTQLRLHHALILLTERTPVTAVAHQCGWSSTSAFIEVFRRTFGHTPGS 300 Query: 255 YI 256 + Sbjct: 301 HR 302 >UniRef50_D0J7G0 Transcriptional regulator, AraC family n=11 Tax=Proteobacteria RepID=D0J7G0_COMTE Length = 274 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 73/244 (29%), Positives = 123/244 (50%), Gaps = 1/244 (0%) Query: 21 AFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV 80 F + +P H HR G L A HG+++ V + PPQ+ VWIP GV HS + Sbjct: 30 YFRYDEFGEHSEAPPHSHRWGHLNYAAHGSLSMDVPTGHILCPPQHGVWIPPGVVHSCYL 89 Query: 81 TANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLF 139 + +++ P +P T +++ P+ + ++ R RL +V+ Sbjct: 90 QHAVQYRSVYLAPDLCADLPQTAGCMRLGPIVKAVLADFGARGVQIPVTDADLRLARVVH 149 Query: 140 DELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKET 199 D+L P + LPV+ HP + +++ M P + +L +WA M+ER LAR +E Sbjct: 150 DQLRATPLELSFLPVARHPALVQVLDAMQSRPDDHRSLAEWAETVHMTERTLARHCQREL 209 Query: 200 GLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 G+S +WRQ+++ + A+ L G TVQ++A+ LGY + +AFI MF++ G P ++ Sbjct: 210 GMSLGEWRQRMRYLQAIDALEAGHTVQQIAYDLGYSTPSAFIAMFQRESGLPPEQFRREF 269 Query: 260 TTVS 263 S Sbjct: 270 CASS 273 >UniRef50_C3JKZ1 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus erythropolis RepID=C3JKZ1_RHOER Length = 267 Score = 220 bits (561), Expect = 5e-56, Method: Composition-based stats. Identities = 77/265 (29%), Positives = 120/265 (45%), Gaps = 9/265 (3%) Query: 6 NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65 N++ + D +A H+HR+ Q + A++GA+ E+ W V P Sbjct: 3 NISINDVDHSPRGVLAIGTDY-PPGHVLAAHEHRRAQFLFAVNGAMNVETEDGEWTVLPS 61 Query: 66 YAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRT-- 122 AV IP GV H+ + L+IEPSA P C + +S L REL++ + Sbjct: 62 NAVMIPAGVAHAVTMDG-VSTRSLYIEPSAAPWFPVRCRVVAVSSLLRELLVAAVDMDVE 120 Query: 123 ----TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALG 178 A + ++Q++ EL + LP+ HP +R + P + Sbjct: 121 LNVEDDSPAHGRSAAVLQLILHELRDLAPLPVELPLPRHPGLRALCAQYLAAPSIHDSPT 180 Query: 179 QWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTT 238 +WA +SER L RL++ ETG+S W Q+ ++ AL L G +V +A LGY + Sbjct: 181 RWADRLHVSERTLHRLLISETGMSASSWMQRACILHALPKLSAGASVTAIASELGYSTPA 240 Query: 239 AFITMFKKGLGQTPGRYIARLTTVS 263 AF M + G P Y AR+TT + Sbjct: 241 AFAAMCTRVSGAPPSSYRARVTTQT 265 >UniRef50_D1XHM7 Transcriptional regulator, AraC family n=1 Tax=Streptomyces sp. ACTE RepID=D1XHM7_9ACTO Length = 271 Score = 219 bits (558), Expect = 9e-56, Method: Composition-based stats. Identities = 76/243 (31%), Positives = 119/243 (48%), Gaps = 3/243 (1%) Query: 29 DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88 + +P H+H +G L+ G ++ W+ P VWIP G EH ++ ++ Sbjct: 25 HDERTPEHKHTRGHLVYPATGVLSLVTSVGSWIAPSNRVVWIPAGFEHRHRAHGRTDMRI 84 Query: 89 LFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147 +F+ PS + P L ++PL RE LTL +R RL +V+ D++ P+ Sbjct: 85 VFMAPSLAALLPAHPAVLVMTPLAREATLTLT--GAERRPAGARSRLRRVIIDDITTAPE 142 Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207 Q LHLP ++R +V ++ +G + LG+ ER L+RL +ETG+SF QWR Sbjct: 143 QPLHLPEPRDDRLRAVVALVEEGMSDPLTLGRLGHEVGAGERTLSRLFQRETGMSFPQWR 202 Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSA 267 QL++ AL L G +V A G+ + +AFI F +GQTPG+Y L + Sbjct: 203 TQLRVHHALLLLADGGSVINTATACGWANPSAFIDAFTALVGQTPGQYRRSLREEVARPG 262 Query: 268 KPD 270 Sbjct: 263 DDP 265 >UniRef50_B9JII8 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JII8_AGRRK Length = 276 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 71/241 (29%), Positives = 108/241 (44%), Gaps = 1/241 (0%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 A V T P H HR+ QL+ G I WMVPP +A++IP G+EH Sbjct: 27 NADVLVHSSEPQQGYTVPWHHHRRSQLLCVFAGVILILTTRGRWMVPPGHALFIPAGLEH 86 Query: 77 SNQVTANAELCFLFIEPSAVTMPTT-CCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135 S ++ ++ + +++ P ++++ L R L+L ++ Sbjct: 87 SVEMLSDVSMKSVYVMPHDPRQSDEAPRVVEVTDLARSLLLEAIRLREAPVGNRKAELVL 146 Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 +L +E+ ++ L LP S ++ + P L WA AMS R R Sbjct: 147 SLLLEEISTLEERPLGLPFPSDRRLAALCRAYLANPTPNARLDDWAEKLAMSRRTFTRQF 206 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 KETG+SF WRQQ + L L +G V VA GY+S AF TMF++ LG +P Y Sbjct: 207 RKETGISFTTWRQQASVFACLPQLAEGQPVTNVALEAGYESAAAFTTMFRRMLGTSPRTY 266 Query: 256 I 256 + Sbjct: 267 M 267 >UniRef50_A8AKK6 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC BAA-895 RepID=A8AKK6_CITK8 Length = 251 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 59/239 (24%), Positives = 108/239 (45%), Gaps = 1/239 (0%) Query: 26 AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85 + + T+ H H GQL G + E W + P W+P + H + +A Sbjct: 10 HHSSKHTTQWHHHPGGQLYWITRGMVMVETEQGQWALTPGSVGWLPPSLPHCAWMPVSAY 69 Query: 86 LCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ 144 L P++ C SP L+ + T L+QV+ DE+ Sbjct: 70 GASLHFSVEYCGVFPSSPCVRAASPFLLLLLEKICGEGTIGEPSERLAHLLQVMVDEIRC 129 Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204 L + ++R + + + + + A +S R L+RL +++TGL+F Sbjct: 130 ADALSSQLILPDDRRVRQIAQKILADRACTRSQAELAKQAGLSVRTLSRLFIQQTGLTFG 189 Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVS 263 QW+Q+ ++I +L+ L++G+ V VA GY++ +AFI +F++ +G TPG++ R + Sbjct: 190 QWKQKAKVISSLEYLLRGEPVSLVAQLAGYENVSAFIAVFRRFMGMTPGQFYLRFGHGT 248 >UniRef50_Q47UH5 Substrate-binding transcriptional regulator, AraC family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47UH5_COLP3 Length = 272 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 65/248 (26%), Positives = 116/248 (46%), Gaps = 2/248 (0%) Query: 20 VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79 V I HQH Q+ G + V ++ +++P ++IP H + Sbjct: 21 VTAKIEQMAKGYIDRWHQHPWHQIAFPFEGILQTKVADSQFVIPHSGMLFIPANTPHESF 80 Query: 80 VTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTL-ANRTTTQRAEPMTRRLIQV 137 V + + +++ P P T + ++P REL+L + + + +E +L+ V Sbjct: 81 VVTDTKFIGIYLNPQFQNHFPLTAKAISVTPFLRELVLHINHGVSNSIVSEEELSKLVAV 140 Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197 L D++ Q+ L + S ++ + + + P L WA SER L+RL K Sbjct: 141 LIDQISSGESYQMKLLLPSDRRLMIIFKALMTDPQLNTKLSDWAKQVGASERTLSRLFTK 200 Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 E G++F WRQ L+L+ +L L +VQ++A +GY++ ++FI FKK QTP +Y Sbjct: 201 ELGMTFPLWRQHLRLVSSLNLLETNLSVQEIAFKVGYNADSSFIYAFKKLFQQTPQQYRH 260 Query: 258 RLTTVSPQ 265 +S + Sbjct: 261 SGFKLSSR 268 >UniRef50_A8GAI3 Transcriptional regulator, AraC family n=2 Tax=Serratia RepID=A8GAI3_SERP5 Length = 257 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 69/232 (29%), Positives = 110/232 (47%), Gaps = 2/232 (0%) Query: 31 LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLF 90 +P HQH +GQL L HG I + W + W+P H N L+ Sbjct: 14 HLTPWHQHTRGQLYLLTHGMIALETQEQQWAMTAGSIGWLPANCAHQALACGNVAGWSLY 73 Query: 91 IEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ 149 + S +P S L L+ LA QR RRL+QVL DE+ Q Sbjct: 74 LPGSLCADLPKQPHLSTASGLILALVERLAQF-AGQRLNAPQRRLLQVLLDEMCAQESTP 132 Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209 L LP+ ++ + + P + +WA + +S R L+R + ETG++F +WRQQ Sbjct: 133 LQLPLPQDARLLKIARALLNEPASERSQSEWAAWTGLSVRTLSRHFISETGVTFARWRQQ 192 Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTT 261 +++ +L+ L +G+ + ++A GYD+ +A+I F++ G TPG Y + T Sbjct: 193 ARVLRSLEPLSRGEAINQIAGDCGYDNVSAYIAAFRQRFGTTPGLYFVQRET 244 >UniRef50_B9R0N9 Transcriptional regulator, AraC family protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R0N9_9RHOB Length = 279 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 1/252 (0%) Query: 6 NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65 L+ + + + + H H QL + G+I E + PP+ Sbjct: 23 ELSEFPDHEVRAKIIGYANSQSAGRGHNGWHSHDSAQLFHVVKGSIAIDTEVGTFFAPPE 82 Query: 66 YAVWIPGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTT 124 AVW+P + H + + E+ F+++ +P T ++++ L R LIL + Sbjct: 83 RAVWLPPRIAHETRYLTDTEIRFVYVNYDHAQDLPKTAQVIQVTTLLRALILEFMSYPRA 142 Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184 + + R+ V+ D+L P L LP+ PK+R + + + + P AL A Sbjct: 143 ETIDGPAGRIADVILDQLKMLPAAPLQLPMPQDPKLRDLCDGLVRCPAHVPALADAAARS 202 Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244 AMS R+ R I ETG+++R W +Q++L AL+ L G +V V+H LGY+ +AF+ F Sbjct: 203 AMSVRSFERRIKAETGMNYRTWCRQVKLFRALELLAAGRSVSDVSHKLGYEGPSAFVATF 262 Query: 245 KKGLGQTPGRYI 256 +K G TPGRY Sbjct: 263 RKAFGVTPGRYF 274 >UniRef50_C7JHN7 Transcriptional regulator AraC n=8 Tax=Acetobacter pasteurianus RepID=C7JHN7_ACEP3 Length = 265 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 1/234 (0%) Query: 30 ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89 T+ H H GQ+ + G + ++A W++ P+ +W+P + H + L Sbjct: 32 RRTTVPHVHNNGQIFVVESGVMAVKTQDAYWLIGPEQLLWLPPRLAHEARSHGAITGWSL 91 Query: 90 FIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQ 148 +I + + L + L+ T + T L + +DE P Q Sbjct: 92 YIAEDRCAFLVSKPFVADSTRLLSAQVERLSQNTQDTTWDARTACLAESFWDEFLSIPHQ 151 Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208 L LP +++ + + + P + WA MS R+ R +TG+ F WRQ Sbjct: 152 SLSLPFPGDVRLKRVADALCANPADSRGQQDWADMAGMSLRSFVRYFTADTGMQFSAWRQ 211 Query: 209 QLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262 +L+++ A + L +G+ V VA +GY+S AF FKK G +P Y R T Sbjct: 212 RLRILNAQEKLARGENVTHVAAAVGYESLGAFAAAFKKNTGYSPSTYAQRCMTR 265 >UniRef50_C8QEY4 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QEY4_9ENTR Length = 260 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 65/246 (26%), Positives = 117/246 (47%), Gaps = 1/246 (0%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 P + H + H H GQL HG + ++ ++ P QYAVWIP Sbjct: 8 PHLQEFPGDLYFRHDRLPAMEWKTHAHPWGQLNYVSHGVMHLEIDGIRFLSPSQYAVWIP 67 Query: 72 GGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130 +H + + + ++I +P+ TL +SP+ ++ A R Sbjct: 68 PFADHFSFASRDLVYRTVYISLKLSNRLPSKPTTLNVSPVLHAILDDFALRDVRVPETEE 127 Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190 R+ QV D++ + +LP + ++ ++++ + P + ++ +A M+ R Sbjct: 128 DLRMAQVALDQILHIKPHETYLPYAVSDELNSVIKELQLNPGDRRSVEDFAEQLHMTSRT 187 Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250 L R +E G+SF +WR +L+ + A++ L G TVQ++A LGY + +AFI MFK+ G+ Sbjct: 188 LERRCQRELGISFGEWRSRLKFMHAIESLEAGLTVQRIALELGYTTPSAFIVMFKRFTGK 247 Query: 251 TPGRYI 256 TP +Y Sbjct: 248 TPEQYR 253 >UniRef50_Q0TI30 Transcriptional regulator, AraC family n=14 Tax=Enterobacteriaceae RepID=Q0TI30_ECOL5 Length = 271 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 73/254 (28%), Positives = 116/254 (45%), Gaps = 5/254 (1%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 P + + T P H+H QL+ G + ++W+V A+W+P Sbjct: 7 PKASPGHHIIGLDSEHLNGGTVPWHKHLYAQLLYPAEGVVRIWAGESVWLVHASSALWLP 66 Query: 72 GGVEHSNQVTANAELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLANRTT----TQR 126 + H T N L + + E + T+ C ISPL REL++ + T + Sbjct: 67 PQMPHKFVATGNVLLKTVLVSEAESETLGKVCFMTGISPLLRELLIAINQLPPSQSTTDK 126 Query: 127 AEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAM 186 + L ++ E+ + L LP + +++ + E + L A + Sbjct: 127 QQLRFSALETLILQEIKMGVKMSLELPWPNDERLQQLCENLLNNQGYLPTLDNLADKINV 186 Query: 187 SERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKK 246 S R L RL VKETGL+FR W QQ+ +I A+ L G ++ K+AH LGY S +F MFK+ Sbjct: 187 SSRTLMRLFVKETGLTFRHWVQQMHVISAVTLLDDGYSLTKIAHRLGYASAESFGNMFKR 246 Query: 247 GLGQTPGRYIARLT 260 G +PG++ RLT Sbjct: 247 RTGYSPGKFTRRLT 260 >UniRef50_Q7VTI7 AraC-family regulatory protein n=3 Tax=Bordetella RepID=Q7VTI7_BORPE Length = 275 Score = 216 bits (550), Expect = 8e-55, Method: Composition-based stats. Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 13/269 (4%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 M + AV + + H H + Q + G + LW+ Sbjct: 1 MDKPAAEAISVAHARAPAVVTRRNRYPADAHVKPHWHDRAQFLCGSSGVMRVATRRRLWV 60 Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA- 119 VPP A+WIP H ++++ ++ L+I+ + V MP C L ++ L REL++ + Sbjct: 61 VPPMRALWIPARTVHEIRMSSAVDMRSLYIDAALVRGMPDDCAVLDMTALMRELVVRAST 120 Query: 120 -----------NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMA 168 + + + L ++ EL + P+ L LP+ +R + E Sbjct: 121 DAPSTRDAPQRHEASDGALDEEYGLLSALMVAELRRLPRCGLDLPLPESAALRGLCERAL 180 Query: 169 KGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKV 228 + + A +S R L R + ETGLSF +W QQ +L+ A++ L G V V Sbjct: 181 ADLSAFDSAQAQARRLKLSARTLYRRFLDETGLSFARWIQQARLLDAVRRLGDGQAVTDV 240 Query: 229 AHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 A LGY S +AF MF + LG +P + Sbjct: 241 ALDLGYQSPSAFTAMFNRALGCSPREWRR 269 >UniRef50_Q7NRZ6 Probable transcriptional regulator AraC family n=1 Tax=Chromobacterium violaceum RepID=Q7NRZ6_CHRVO Length = 247 Score = 216 bits (550), Expect = 9e-55, Method: Composition-based stats. Identities = 69/239 (28%), Positives = 108/239 (45%), Gaps = 2/239 (0%) Query: 18 AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77 +A + H H +GQL A GA+ + ++P WIP G+ H Sbjct: 7 PGLAVAALRRGVGDHTARHSHAEGQLAWASAGALELDADGRRILLPGGCVGWIPPGMPHG 66 Query: 78 NQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136 L +E + + +P + SPL + + L + + RRL+ Sbjct: 67 AHYHGELRGWSLQLEAACLPALPPDLRVWRASPLLQGVFQRLGDWPEQAGPDA-ARRLVA 125 Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196 VL DEL L SHP +R + E +++ P L +WA MS R+L R Sbjct: 126 VLADELAWAEPYPASLAWPSHPALRKLAEALSRDPSLDWDLERWARQIGMSRRSLIRHFR 185 Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 ETG+ +WR++L+++ A L +G +V A LGY ++AFI F++ G+TPGRY Sbjct: 186 AETGMGVAEWRERLRMLRARALLAEGRSVGYCAAELGYAGSSAFIVAFRRCFGETPGRY 244 >UniRef50_A6VY36 Helix-turn-helix-domain containing protein AraC type n=2 Tax=Gammaproteobacteria RepID=A6VY36_MARMS Length = 258 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 121/259 (46%), Gaps = 5/259 (1%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 M+ L Y DR V+ I+ + + H H Q++ + G + T+E+ + Sbjct: 1 MNANELIQYFSDRQ---VVSKIINLPANGVE-EWHAHPWHQVLYPIAGLLQSTIESKSII 56 Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLAN 120 VP ++IP H + + +++ P S + + ++P +ELI+ L Sbjct: 57 VPHNGMLFIPANAIHKSVSVTKTQFLAVYLNPKSTESYGNNAKSCLVTPFLKELIVLLVK 116 Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180 + AE MT L+ VL D++ ++ L + + ++ + + + P L +W Sbjct: 117 QGLDNHAEQMTTNLLCVLRDQIAIAESYEIPLLIPNDRRLMAIFVELNQQPDLALTLSEW 176 Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240 A S R L+RL KE SF WRQ ++L+++LQ L K ++Q +A LGY S +A+ Sbjct: 177 ATKVGASPRTLSRLCAKEFNQSFAMWRQNIRLVLSLQLLEKNMSIQNIALDLGYQSDSAY 236 Query: 241 ITMFKKGLGQTPGRYIARL 259 I FK QTP +Y R Sbjct: 237 IHAFKGLFAQTPSQYRKRC 255 >UniRef50_B3Q9E6 Transcriptional regulator, AraC family n=2 Tax=Rhodopseudomonas palustris RepID=B3Q9E6_RHOPT Length = 286 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 76/241 (31%), Positives = 115/241 (47%), Gaps = 1/241 (0%) Query: 18 AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77 VA +E TS H HR+ Q IL + G E ++VPP + +WIP GV H Sbjct: 37 RPVAAMTATYPNESTSTRHLHRRDQFILQITGVTAMMTERGHFVVPPGHGLWIPAGVVHQ 96 Query: 78 NQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136 ++ E +++ P+ TC ++ S L L+ LI+ Sbjct: 97 SRAWGEVEAQTIYVTPNRERKASDTCRLIRASSLIEALMDEAVRIPEIYDQNGRDGTLIE 156 Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196 +L E+ + P+ LH+ + P++ + + + P L WA +S R L RL Sbjct: 157 LLLTEIARMPEVTLHVQMPPDPRLAEICKAVLGDPSSNLTLDHWADKCGLSRRTLTRLFR 216 Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 +ETG SF WRQ+++L+ AL L G+TV VA +GYDS +AF MFK+ LG P Y+ Sbjct: 217 RETGQSFSGWRQRVRLLEALARLGAGETVTGVALDVGYDSPSAFAAMFKRELGSAPRHYL 276 Query: 257 A 257 Sbjct: 277 R 277 >UniRef50_Q13M62 Transcriptional regulator, AraC family n=4 Tax=Burkholderia RepID=Q13M62_BURXL Length = 266 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 83/257 (32%), Positives = 121/257 (47%), Gaps = 7/257 (2%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 MM + +PD + A H T L P+ R+ +LI A G + E W Sbjct: 17 MMDTV-----DPDGVEQPAFVIGEHHET--LDEPLGAFRRARLIHASAGVLIVRTETGRW 69 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120 +VPP +A+WIP GV H T C L+ AV +P + L L+ A+ Sbjct: 70 VVPPGHALWIPAGVLHRLSATGPVRFCSLYAGADAVPLPFHSIAVVPDRLVAALLSAAAD 129 Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180 + + RL+QVL D LP P L L P+ + + ++ P + L Sbjct: 130 LPHDKPFDEPAARLVQVLLDRLPGLPVAPLGLNWPRDPRALRIADALSSNPADSAVLEDL 189 Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240 A ++ R ARL VKETG +F QWRQQL+L+ A++ L G +V +VA +GY ++F Sbjct: 190 AAAAGVTARTAARLFVKETGQTFGQWRQQLRLLAAVEHLGAGASVTQVAPEVGYSDVSSF 249 Query: 241 ITMFKKGLGQTPGRYIA 257 I +F+ G TP RY Sbjct: 250 IAVFRDAFGDTPARYFR 266 >UniRef50_A1BBK0 Transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria RepID=A1BBK0_PARDP Length = 262 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 83/246 (33%), Positives = 109/246 (44%), Gaps = 2/246 (0%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 D VA + D HQHR+ QLI A G I A W+VPP VWI Sbjct: 8 RIDHAPRPIVAIG-NDYPDGFVIQPHQHRRAQLISAATGVIVLATPEATWVVPPNRGVWI 66 Query: 71 PGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEP 129 P H ++ + + L+IEP AV MP+ C L IS L R LI N Sbjct: 67 PPATRHHVRIVGDVGMQSLYIEPGAVPGMPSHCQVLGISALMRSLIAEALNLPLEYDQHG 126 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 L++++ E+ P L LP S P++ A+ P W+ MS R Sbjct: 127 RDGVLMELIRLEMGGLPALPLSLPFPSDPQLSRRCRAFAEKPAIHETTDDWSRALGMSRR 186 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 + R +ETG SF WRQQ L+ A+ L G+ V VA LGY++ AF MFK+ G Sbjct: 187 SFTRFFRRETGASFMAWRQQACLLYAMPRLAAGEAVTTVAMDLGYENPAAFTIMFKRTFG 246 Query: 250 QTPGRY 255 P Y Sbjct: 247 SPPLAY 252 >UniRef50_D1VDY4 Transcriptional regulator, AraC family n=1 Tax=Frankia sp. EuI1c RepID=D1VDY4_9ACTO Length = 322 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 60/261 (22%), Positives = 110/261 (42%), Gaps = 6/261 (2%) Query: 18 AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77 A+ + L +P H H Q+ A+ G + +++PPQ A W+P G+ H Sbjct: 58 DALGGGYMYEGERLVTPWHSHDLHQIEYAMSGVVEVETAGGRYLLPPQQAAWLPAGLSHQ 117 Query: 78 NQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQ-RAEPMTRRLI 135 + + +P V P + +SPL RE+IL + ++ ++ Sbjct: 118 ATMNTAVRTVSVMFDPRIVPRPGDRARIVAVSPLIREMILYALRWPIARTESDDVSDGFF 177 Query: 136 QVLFDELPQQ--PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193 + L + + + L LP S+ P + + + + +SER L R Sbjct: 178 RTLAHLVAEAIDHEAPLSLPTSADPLVAAAMAHTRENLG-TVTAATVSRAIGVSERTLRR 236 Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252 E G+S+R + Q +L+ A+ L + G +V V+ +G+++ +AF F +G+TP Sbjct: 237 QFAAELGMSWRAYLLQARLLRAMALLAEPGPSVLDVSLAVGFENVSAFARAFALRVGETP 296 Query: 253 GRYIARLTTVSPQSAKPDPRQ 273 Y R+ P PR+ Sbjct: 297 SAYRRRVAADPKPIGGPAPRE 317 >UniRef50_UPI0001B55F3C AraC family transcriptional regulator n=3 Tax=Streptomyces RepID=UPI0001B55F3C Length = 271 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 101/230 (43%), Gaps = 4/230 (1%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 H+H QL A G +T + W++PP A+WIP G H+ T A + Sbjct: 35 PGGRRFERHEHSAHQLAWAAAGTLTVDIGAHSWVLPPTLALWIPAGTPHTTSATRPALMR 94 Query: 88 FLFIEPSAVTMPT-TCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146 +++ P + + + PL RELI LA+ L+ D L Sbjct: 95 SVYLLPRHSPVRRPGPTVVTVGPLLRELITHLADTPLEPGPRARAEALLP---DLLRPVE 151 Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206 + +P+ + + E + P + +L +W S R LARL ETGLSF +W Sbjct: 152 VTTIEVPMPRDERALRVAEALVAHPADPRSLDEWGRLVGASARTLARLFSAETGLSFGRW 211 Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 R + +L L+ + + VAH +GY S ++F+ F+ G+TPG Y Sbjct: 212 RTRARLRAGLEHMAVNRPLTAVAHRVGYTSPSSFVAAFRHETGRTPGAYF 261 >UniRef50_C4WMA6 AraC family transcriptional regulator n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WMA6_9RHIZ Length = 249 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 84/242 (34%), Positives = 123/242 (50%), Gaps = 2/242 (0%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 A I P H+HR QLI A G +T EN W+VPP AVW+P VE Sbjct: 8 PLALAISTIAQDDASFAGPPHRHRDAQLIYARSGVVTVATENGSWVVPPNRAVWVPPMVE 67 Query: 76 HSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134 H+ + + +FI P A +P++C +++S L RELIL L + A P R+ Sbjct: 68 HATRSHGPVQFRTIFIHPDAARSLPSSCGVVEVSSLLRELILRLVELQ-DRPATPFAHRV 126 Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 ++L +EL P + L L + S ++RT+ + + P +L A MS R+ R Sbjct: 127 CELLLEELTFLPAEPLSLSMPSDHRLRTLCQTLQAEPDTELSLDAAASRTGMSRRSFMRH 186 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 +ETG+++ +WRQQ +L+ AL L G V VA GY S +AF FK+ LG++P Sbjct: 187 FERETGMTYGRWRQQARLLAALPALAAGVPVVTVALDCGYQSASAFAATFKRSLGRSPAS 246 Query: 255 YI 256 Y Sbjct: 247 YF 248 >UniRef50_C8QCP4 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QCP4_9ENTR Length = 259 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 1/226 (0%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 H H GQ+I + VE + P +WIP G HS+ + + Sbjct: 33 PHAHAWGQVIFVKSHVLEMEVEGERLLTPADMPIWIPPGHRHSSYNHRQSLFRTFNLATD 92 Query: 95 AVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153 +P C L + + ++ A R Q RL +VL D L P Q+ +LP Sbjct: 93 LCDGLPQQACLLNVDTIVHAIMDEFARRGLEQPLSDADWRLCEVLGDRLRLAPVQKSYLP 152 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 S+ + ++ + P + L QWA +ER LAR ++ +SF +WRQ+L+ + Sbjct: 153 GSNDKLLAPILHALQVHPGDNTTLAQWAKRVFTTERTLARRCQQQLNMSFSEWRQRLRFL 212 Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 A+ L +G +VQ +AH LGY S +A I MF+ G TP RY +RL Sbjct: 213 RAITLLEQGISVQAIAHELGYSSASALIVMFQHQAGTTPDRYRSRL 258 >UniRef50_B4SMW0 Transcriptional regulator, AraC family n=3 Tax=Stenotrophomonas RepID=B4SMW0_STRM5 Length = 265 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 66/250 (26%), Positives = 118/250 (47%), Gaps = 2/250 (0%) Query: 7 LNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQY 66 L+ D V + HQH +GQL+ A G + ++ W++P + Sbjct: 10 LDPALADAADGPVVLAARLRQHGMRRTARHQHARGQLLGAQQGLLRIAADDLHWLLPAGH 69 Query: 67 AVWIPGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQ 125 WIP + H+ + L+ A +P+T + + L + + + Sbjct: 70 VAWIPPLLPHALLSADGFDGWSLYFNAEACLGLPSTPRIFQPNALLQAATIRALRWP-HR 128 Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185 + RL V+ DE+ L LP +++ + +A+ P + ++ WA Sbjct: 129 PLDAAQARLAGVIADEIAASTPLPLALPQPRDRRLQKIAAALARAPHDNRSIEDWATRSG 188 Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245 +S R+LAR + ET ++ QWRQ+L++++AL L+ G+ V VA ++GYD+ +AFI +FK Sbjct: 189 LSSRSLARHWLAETHMTLSQWRQRLRVLLALPRLLSGEPVISVALSMGYDTPSAFIAVFK 248 Query: 246 KGLGQTPGRY 255 + +G TP RY Sbjct: 249 REMGVTPARY 258 >UniRef50_B0T088 Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. K31 RepID=B0T088_CAUSK Length = 249 Score = 213 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 80/246 (32%), Positives = 111/246 (45%), Gaps = 4/246 (1%) Query: 13 DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72 D ++A H H GQL+ A G + + A W+VPP A+WIP Sbjct: 6 DGFDVRSLALTFR---PGAVLGKHAHVWGQLVFASAGVMRVATDAATWLVPPTKAIWIPA 62 Query: 73 GVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131 G+ H A + L+I P +PT L+++PL RELIL + P Sbjct: 63 GLTHQILFGGEAAMRTLYIAPGRAATLPTEPQALEVAPLLRELILHILKIGMLTPQRPEH 122 Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191 RL +L D + Q Q L LP+ + + + P E L AG F S R L Sbjct: 123 DRLAGLLIDLMRQARSQDLCLPLPRDRRALALAIHLQARPDEERGLAALAGPFGASLRTL 182 Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251 R+ +ETGL+ WRQ+ +LI ++ L G +V A GY S AFI F + T Sbjct: 183 QRVFPRETGLTLETWRQKARLIHSVACLTTGASVTDAALASGYRSVGAFIGAFTRQFEVT 242 Query: 252 PGRYIA 257 PGRY+A Sbjct: 243 PGRYLA 248 >UniRef50_A1VPE7 Transcriptional regulator, AraC family n=2 Tax=Comamonadaceae RepID=A1VPE7_POLNA Length = 280 Score = 213 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 81/270 (30%), Positives = 120/270 (44%), Gaps = 17/270 (6%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENAL- 59 ++ + + + P + V + + H H QL G + T E Sbjct: 9 LISLGDTDPFTP--SPQRPVRVRSRSMAADTHLEPHTHAWAQLAYCATGVVQVTAEQTRP 66 Query: 60 ---------WMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA-VTMPTTCCTLKISP 109 ++PP AVWI G H V AEL L+++ SA C L +SP Sbjct: 67 DQAQADEITCIIPPSRAVWIAPGARHHITVREAAELRTLYLDASATPPGWQGCRVLVVSP 126 Query: 110 LCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSS----HPKIRTMVE 165 L REL+ +L + + E T+ L ++ DE+ Q L +P+ ++R + E Sbjct: 127 LLRELVHSLDDGSGQPLTEARTQWLSALVLDEITHADIQALGVPMPHPDSGDKRLRALCE 186 Query: 166 MMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTV 225 + + P E L WA SER +ARL + GLS++QWRQQ L AL L +G V Sbjct: 187 AVLRAPSERATLAGWAADIGASERTVARLFRDQLGLSYQQWRQQAILAHALPMLARGQPV 246 Query: 226 QKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 VA GY S +AF MFK +GQ P ++ Sbjct: 247 GAVAAASGYASESAFSAMFKAAMGQPPSQF 276 >UniRef50_A8T3D4 AraC-type DNA-binding domain-containing protein n=5 Tax=Vibrionales RepID=A8T3D4_9VIBR Length = 266 Score = 212 bits (541), Expect = 8e-54, Method: Composition-based stats. Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 2/237 (0%) Query: 20 VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79 + + A + S VH H K QLI + HG +T T+E+ +++PP A WIP G H+ Q Sbjct: 18 LVIGVAAEISDHDSGVHFHAKDQLISSQHGCMTITLEDVKYVLPPMRAAWIPRGTSHNAQ 77 Query: 80 VTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL 138 T A+ L+ +PS +P ++PL R LI ++ + L + Sbjct: 78 STNVAQYRSLYFDPSLASRLPRKIRIFDVTPLMRILIDRMSFWPFDKPESEQINTL-NLF 136 Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198 +EL L LP+ ++++ + + +L + + SE+ + R+ +E Sbjct: 137 IEELNDSEDVYLQLPLPKDYRLQSWISKIDDEAFSAPSLAKLSQLVGASEKTITRIFNRE 196 Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 TG+ ++ WRQQ +L+ A++ L G + +AH L + S +AFI F++ G TP Y Sbjct: 197 TGMPYQSWRQQWRLLGAIELLSSGMRLSDIAHRLEFSSDSAFIYFFRQKTGTTPMSY 253 >UniRef50_Q13VV8 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=Q13VV8_BURXL Length = 268 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 2/240 (0%) Query: 20 VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79 V F ++ H+H Q + A +G + +PP Y VWIP G H+ Sbjct: 25 VYFRAYSLKGGTCVQGHEHVWWQFLFARNGLMQVQAGATTLTLPPDYGVWIPPGCVHTLW 84 Query: 80 VTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA-NRTTTQRAEPMTRRLIQV 137 + EL L+IEP+AV + + R I + + R ++V Sbjct: 85 IGEEVELESLYIEPTAVAIQDQEPRVVMVDEFVRAFIHHGCTSIPVKYDEDGADGRKVKV 144 Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197 L D L P +LP + P++ + + P L + AG MS R R ++ Sbjct: 145 LLDSLQSLPDAPFNLPFPTEPRLLEVCLTIQSAPHLAHTLDESAGLARMSSRTFTRHFLR 204 Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 TGL + WRQ+++L+ +L+ L TV +VA T+GY + +AF FK+ G++P R+ Sbjct: 205 ATGLPYHTWRQRMRLLGSLEMLRSDITVTEVALTIGYSTPSAFTHAFKQLFGKSPSRFTR 264 >UniRef50_B1LVX0 Transcriptional regulator, AraC family n=3 Tax=Rhizobiales RepID=B1LVX0_METRJ Length = 272 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 64/234 (27%), Positives = 102/234 (43%), Gaps = 1/234 (0%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 VA + H H + QL+ A G + ++ W+VP +A+WIP + H Sbjct: 28 PRPVAVMPKTYAAGMHLDRHFHPRAQLLYATSGLMMAFADDGTWVVPEGHALWIPPRLPH 87 Query: 77 SNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135 + +C +++P+AV P +C + +S L + LA + L Sbjct: 88 AVATHGAVSMCSAYLDPAAVRSFPASCRVIAVSRLMASALTALAEEPVLYAVDGRGGHLA 147 Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 ++ DE+ + P L LP+ P++R + + + P L WA S R L R Sbjct: 148 ALVLDEIGRAPATPLALPLPRDPRLRRVCLALIEDPASEADLDAWADRAGASRRTLTRGF 207 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 ETGLSF WR + ++I AL +G + VA +GY S A T + LG Sbjct: 208 RAETGLSFGDWRARARVIRALALAAEGRPPRAVAAAVGYRSAQALRTTVARVLG 261 >UniRef50_B4EHM1 AraC family regulatory protein n=5 Tax=Burkholderia cenocepacia RepID=B4EHM1_BURCJ Length = 271 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 77/232 (33%), Positives = 116/232 (50%), Gaps = 6/232 (2%) Query: 26 AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85 A H H+ GQL+ G + VE W+ PP A+WIP H+ +V + + Sbjct: 35 ARALAHEYAPHAHQAGQLLFTTRGVLVLDVEGQRWITPPLRAIWIPARTVHAMRVADDVQ 94 Query: 86 LCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLAN-RTTTQRAEPMTRRLIQVLFDELP 143 LC L++ + +P T C + +SPL REL +++ + +P L ++ DEL Sbjct: 95 LCSLYLGDALGARLPATLCAMTVSPLLRELATRVSHPFDCSVDHDP----LARLFADELS 150 Query: 144 QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203 + Q L LP+ ++ + E + + P L A A+S R+LARL ETG+S Sbjct: 151 ELAQTPLTLPLPRDRRLLKLCERLQREPHCELPLDTLARDAALSARHLARLFRSETGMSV 210 Query: 204 RQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 WRQQL+L M+L L G V + AH +GY S T + FK+ G TP +Y Sbjct: 211 AAWRQQLRLSMSLALLASGMPVTQAAHQVGYRSPTTYAATFKRAFGVTPSQY 262 >UniRef50_C6DFV4 Transcriptional regulator, AraC family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6DFV4_PECCP Length = 273 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 59/248 (23%), Positives = 118/248 (47%), Gaps = 9/248 (3%) Query: 14 RHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGG 73 + + + +P H+H++GQL+ A+ G + ++ W++PPQ ++W+P Sbjct: 20 EMNNSDWGCLARSYERGELNPSHKHKRGQLLYAVKGVMLVQTDSRQWVIPPQRSLWLPAE 79 Query: 74 VEHSNQVTANAELCFLFIEPSAVTM------PTTCCTLKISPLCRELILTLANRTTTQRA 127 HS + ++ EL L+ PS V + ++P + LI +L ++ Sbjct: 80 QWHSFTLLSHTELRTLYFTPSFVAETCGMKTLDHIHVIGMTPFAQHLISSLFEQSFNH-- 137 Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187 + + Q+L + + + L + K+ + + + +L ++A AMS Sbjct: 138 -STQKLIAQLLLRIVNETEALPVDLAMPCDDKLHRVAQDILVNNRWNVSLSEFAELVAMS 196 Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247 ER +R ++TG SFR W+Q+ ++ +++ L G V+ VA+ LG+ ++FI F+ Sbjct: 197 ERTFSRYFTEDTGCSFRTWKQRARIFVSMDLLSNGMPVKNVAYKLGFSCPSSFIAAFRTV 256 Query: 248 LGQTPGRY 255 GQTP + Sbjct: 257 TGQTPSCF 264 >UniRef50_C9PF82 Substrate-binding transcriptional regulator AraC family protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PF82_VIBFU Length = 274 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 2/247 (0%) Query: 14 RHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGG 73 H+A + IH H H Q+I L G + ++EN +VP ++IP Sbjct: 10 SPHQAFITKTIHMRA-GYIDDFHTHPWHQIIFPLSGLLQSSIENRSVIVPHNAMLYIPAD 68 Query: 74 VEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTR 132 H + + + +++ P S V + ++P + LIL L NR+T + Sbjct: 69 TVHKSVSVTDTQFLAMYLNPKSGVNYGVEAKSCLVTPFLKALILLLFNRSTQAQPPENLI 128 Query: 133 RLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192 L+ VL D++ Q + L + +++ + E + P +L +WA SER L+ Sbjct: 129 HLLTVLRDQIDTAGQYAIPLLIPRDKRLKAIFEQLTAQPDVKFSLNEWAKHVGASERTLS 188 Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252 RL KE SF WRQ ++L+++LQ L T+Q +A LGY S +A+I FKK TP Sbjct: 189 RLCAKEFDQSFSLWRQNVRLVLSLQLLSTPRTIQDIALELGYASDSAYIYAFKKLFHHTP 248 Query: 253 GRYIARL 259 +Y L Sbjct: 249 SKYRHSL 255 >UniRef50_C4WPU9 AraC family transcriptional regulator n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WPU9_9RHIZ Length = 260 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 2/238 (0%) Query: 10 YEPDRHHEA-AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAV 68 + D + +A + H HR+GQL+ G +T E +M+P YAV Sbjct: 18 HAIDYQNLPRPLAVMRREYKTGMNFGWHSHRRGQLLYGNTGYMTALTEEGAFMLPSGYAV 77 Query: 69 WIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRA 127 + + H+ + E+ +++E + + + LK+S L I LA Sbjct: 78 LLRPDLPHAVETFGETEMYSVYVEENISRDLWEETRVLKVSALLDASIQALAKEPLLYDE 137 Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187 R L ++ DE+ +Q L +P+ + ++R + + P + WA MS Sbjct: 138 NGRGRHLSALILDEIRCAGRQPLTVPLPTEKQLRKLCRNLLGNPGLDLTIDDWAEEVGMS 197 Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245 R + R +ETG+SF +WRQ+L+ ++ +G + + GY S + + K Sbjct: 198 RRTMTRKFRQETGMSFIEWRQRLRASHVMRRQAEGVPLAMASVEAGYQSVSTLRKVMK 255 >UniRef50_A8G994 Transcriptional regulator, AraC family n=12 Tax=Gammaproteobacteria RepID=A8G994_SERP5 Length = 255 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 122/251 (48%), Gaps = 9/251 (3%) Query: 8 NGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYA 67 + ++PD + + I A + S H H GQL+ + G + T+ ++ ++PP Sbjct: 8 DEFDPDAINNSV--LGIAAELAQHDSGPHWHNMGQLLFSQRGCMRITLNESICLLPPARI 65 Query: 68 VWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQR 126 WIP V H QVT A ++++ + L S L RE++ +A T + Sbjct: 66 AWIPPLVVHRVQVTGVAGYRSVYLDNHRYPGLSPHLEVLSASSLLREVLERIALADFTTQ 125 Query: 127 AE-PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185 E + ++ V DE+ ++ LP+ ++R + M P L + A + Sbjct: 126 WESGPSANILAVCLDEIRHAQRELTLLPLPKDRRLRQLAGMEEVPP-----LNELARYSG 180 Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245 SE+ ++R+ KETGLS++QWRQQ +LI A++ L +G + +A L + S +AF T FK Sbjct: 181 ASEKTISRIFRKETGLSYQQWRQQWRLIKAIELLAEGYGLSDIAGKLEFSSDSAFSTFFK 240 Query: 246 KGLGQTPGRYI 256 G +P Y+ Sbjct: 241 NMTGSSPRAYM 251 >UniRef50_C7I316 Transcriptional regulator, AraC family n=1 Tax=Thiomonas intermedia K12 RepID=C7I316_THIIN Length = 291 Score = 209 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 74/244 (30%), Positives = 111/244 (45%), Gaps = 6/244 (2%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95 H H +G L L G + + P Q W+P GVEH+ Q F+ P Sbjct: 46 HCHARGTLFLLTEGLVIVETAQGRQLSPSQTIGWMPPGVEHAVQSYGPTAGFGAFLTPQF 105 Query: 96 V-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154 +P + ++PL ++ + + RL+ VL DEL Q P + L LP Sbjct: 106 CGDLPAEPTSYPVNPLVALVLQKALSWPHDTPLDLTRMRLLLVLLDELRQSPARPLQLPW 165 Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214 ++ ++ + L QWA + +S R+L+R V ETG+SF QWRQ +L Sbjct: 166 PQDARLLSIARALLGNIASPRTLEQWARWADISARSLSRKFVLETGMSFAQWRQWARLTQ 225 Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY-----IARLTTVSPQSAKP 269 AL+ L G V+ VA +LGYDS +AFI F++ LG TP Y + +A Sbjct: 226 ALEWLATGRAVKDVALSLGYDSVSAFIKTFRQALGTTPSAYFQTQQRKQAALNPRVAADQ 285 Query: 270 DPRQ 273 + +Q Sbjct: 286 EAQQ 289 >UniRef50_C1A6S8 AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6S8_GEMAT Length = 286 Score = 209 bits (533), Expect = 8e-53, Method: Composition-based stats. Identities = 77/264 (29%), Positives = 122/264 (46%), Gaps = 11/264 (4%) Query: 13 DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72 D +++ F E S GQLI A GAI+ V +LW+VP + +W+P Sbjct: 17 DLVRTSSIGFHGEYLWRERYS-----DWGQLIWASRGAISVMVGQSLWLVPARSGLWLPP 71 Query: 73 GVEHSNQVTANAELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131 H ++ L +FI A +P T ++PL RE++ + R T A+P Sbjct: 72 ATTHDVRMIGRGVLRLVFIARARARALPKTPAVRALTPLLREILRRVLARDTLTTADPRD 131 Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191 RL+ VL DEL + LP+ + P+ ++ + P + A S R L Sbjct: 132 GRLLGVLVDELSEVSPAPFDLPMPTDPRAIRAAALVREHPAQPPDAITIARHAGASVRTL 191 Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251 R+ ETGL+F WR + +L+ A+ L G++V + G+ T+AF+ F++ G T Sbjct: 192 ERVFRAETGLAFGAWRLRARLMHAMILLANGESVTRTGIAAGFAGTSAFVHAFRRTTGTT 251 Query: 252 PGRY-----IARLTTVSPQSAKPD 270 PG Y +R + VS Q+ P Sbjct: 252 PGAYATPGVRSRTSPVSSQTGVPS 275 >UniRef50_Q2L001 AraC-family transcriptional regulator n=4 Tax=Bordetella RepID=Q2L001_BORA1 Length = 258 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 1/256 (0%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 M+ + + + E VA P H HR+ QL+ A+ G + W Sbjct: 1 MLAQPAHDIHLAFERTEHPVAVLAADYPQGARIPRHCHRRAQLLYAVEGVMIVEARAGRW 60 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA 119 +VPP VW+ G+EH +++ ++ +F+EP AV +P C +++ PL RELIL A Sbjct: 61 VVPPTRGVWLDAGLEHRVRMSGRVKMRTVFVEPDAVAHLPQGGCVVEVPPLLRELILAAA 120 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 + L+++L EL P+ L+LP ++R + + +++ + Sbjct: 121 LLPLSYEDTGRDGLLMRLLLAELAAIPRLPLYLPWPQDKRLRALCDALSRDLAQVHEAAY 180 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 WA +S R L R ++ETG++F +WRQ +L+ AL+ L G+ + +A GY S +A Sbjct: 181 WAEQMQVSTRTLHRAFLRETGMTFGRWRQHARLLSALERLAHGEKILSIALDHGYTSQSA 240 Query: 240 FITMFKKGLGQTPGRY 255 F MFK+ G P + Sbjct: 241 FSAMFKQHFGVPPSAF 256 >UniRef50_A9BNM6 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria RepID=A9BNM6_DELAS Length = 310 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 115/256 (44%), Gaps = 16/256 (6%) Query: 19 AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78 V L H H QL+ A+ G + + W+VPP VW+ GV H Sbjct: 51 PVTGVAADYPAGLEVEEHSHECCQLLYAVQGVLEVRAGSGRWVVPPTRGVWLRSGVPHGL 110 Query: 79 QVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137 ++ ++ LF++ +A +P T C +++SPL RELI +A + ++++ Sbjct: 111 RMRGAVQVRSLFVDAQAAADLPGTDCVIEVSPLLRELISEVARWPASAPPGRRESMVVEL 170 Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAK---------------GPVEWGALGQWAG 182 L EL Q P HLP ++ + +A+ WA Sbjct: 171 LLQELRQPPVVPFHLPWPQDARMAAVCHALAEGEGADGFATAAAAADIGAATATAADWAA 230 Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242 AM E+ R ++ TG+SF +WRQ+ +L+ ++Q L+ G + +VA GY+S +A+ Sbjct: 231 RLAMGEKTFHRHFLQATGMSFGRWRQRARLLSSMQALLAGRPIVQVALEAGYESHSAYSL 290 Query: 243 MFKKGLGQTPGRYIAR 258 F++ G P + AR Sbjct: 291 AFRRQFGMPPSAFGAR 306 >UniRef50_B5GYF3 AraC-family transcriptional regulator n=4 Tax=Actinomycetales RepID=B5GYF3_STRCL Length = 283 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 70/254 (27%), Positives = 111/254 (43%), Gaps = 5/254 (1%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 EP AA+ P H HR +L+ G +T + + ++ V Y +W+ Sbjct: 6 EPLPESAAAILAGSRIVPAPTEWPPHAHRLHELVWVRGGTLTSRMGDRVYTVVEGYGLWM 65 Query: 71 PGGVEHSNQVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEP 129 P G+ H + TA AEL F P + T + ++PL L+ L+ A Sbjct: 66 PAGMVHEGRATAQAELFHAFFAPDRIPFAFTEPMAITMTPLLESLLTHLSCADIDGEARA 125 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 V+FD + +Q L + P+I + E + P + +L +WA S+R Sbjct: 126 RAES---VVFDVIRPSERQ-FALRLPGDPRIDAIAEALLDDPSDGRSLEEWARLLGTSDR 181 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 + R + TGL F QWRQ L++ AL L + V V+ LGY ++FI F++ +G Sbjct: 182 TITRAFRQATGLPFAQWRQMLRVHRALMLLAEDIDVTTVSEVLGYAQPSSFIVAFRRVMG 241 Query: 250 QTPGRYIARLTTVS 263 TPG + S Sbjct: 242 ITPGAFSDAAAGPS 255 >UniRef50_Q5FU43 Transcriptional regulator, AraC family n=1 Tax=Gluconobacter oxydans RepID=Q5FU43_GLUOX Length = 259 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 1/234 (0%) Query: 30 ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89 + H H +GQ+ G + E+A W++ P +W+P + H + L Sbjct: 26 RRIAERHAHARGQIFGIESGVMAIRTEHAYWLIGPGQCLWLPPHIPHEARSHGAVAGWSL 85 Query: 90 FIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQ 148 ++ + + +P + L L L++ R + L + + E P+ Sbjct: 86 YVSAARCSNLPDEPFLAGGTRLLTALADRLSHDADETRWDAQISCLAECFWHEFLAAPRA 145 Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208 + LP + + ++ P + WA AMS R+ R ETGL F WRQ Sbjct: 146 SVSLPFPKSEQFCRVANTLSDNPADNRDQKDWAELAAMSLRSFVRHFTLETGLPFSVWRQ 205 Query: 209 QLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262 +L+++ A + L +G++V VA +GY+S AF T F K G P Y T Sbjct: 206 RLRILNAQEKLARGESVASVALDVGYESLGAFATAFHKNTGYRPSDYARLCRTP 259 >UniRef50_Q8EHW8 Transcriptional regulator, AraC/XylS family n=3 Tax=Gammaproteobacteria RepID=Q8EHW8_SHEON Length = 259 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 76/258 (29%), Positives = 124/258 (48%), Gaps = 1/258 (0%) Query: 4 RLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63 R + D+ A + F A +P H+H GQL L G + ++ P Sbjct: 2 RPVYHPLSSDQLPVADIFFNYEAFLPNTITPKHRHNWGQLQLISGGIMELHASGQRFLSP 61 Query: 64 PQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRT 122 QYA+W+P GVEH + + C L I + P C L ++P+ + ++ L R Sbjct: 62 SQYAIWVPAGVEHESYTRRSIHYCSLNIVANRAQVFPDVTCLLAVTPIAQAIVNDLRQRQ 121 Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182 +RL++VL D+L Q LP S+ ++ +++ + P +L WA Sbjct: 122 VRVAQTDADKRLVEVLIDQLILGQAQPQFLPSSTDKLLQPILQQLELEPASQKSLKSWAS 181 Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242 +ER LAR G+SF + RQ+ + I +LQ L +G ++++VA TLGY+ T+ +I Sbjct: 182 ELHTTERTLARRCQNCLGMSFTELRQRHKFIYSLQLLREGLSIKEVALTLGYNQTSPYIV 241 Query: 243 MFKKGLGQTPGRYIARLT 260 MFKK +P +Y +L Sbjct: 242 MFKKYAQYSPEQYRRQLA 259 >UniRef50_C0YRY4 AraC family transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YRY4_9FLAO Length = 304 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 112/269 (41%), Gaps = 10/269 (3%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 ++ +N + ++ +A + H T +T+ +H H QL+ A G + + W Sbjct: 35 LYTMNDSHFKAVEEDDAE-FYVYHVLTGNVTTEIHYHSSAQLVYAEGGIVHVFTDQKHWY 93 Query: 62 VPPQYAVWIPGGVEHSNQVTAN-AELCFLFI--EPSAVTMPTTCCTLKISPLCRELILTL 118 +P + +WIP G H T+ +L + E + ++ L RE+I Sbjct: 94 LPARCFMWIPAGTPHYIFSTSPKVDLFNFYFKKEENESGFFDEINIYSVNNLLREMIFYT 153 Query: 119 ANRTT-----TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVE 173 + + L VL ++ + + P + + + + Sbjct: 154 KDWDGKITKNDHSKYYFLKALKGVLQEKKHKHLAFPIQHPFPKDETLLKIARYIHANLEK 213 Query: 174 WGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTL 232 + A F MS R L+R + G+++ ++ + L++ +L+ +++G + ++A + Sbjct: 214 PLTIESTAKEFGMSTRTLSRKFKEILGMNYVRFLRALRITRSLELMLEGKYNMYEIAMMV 273 Query: 233 GYDSTTAFITMFKKGLGQTPGRYIARLTT 261 GY+S ++F +FKK +G P Y +L Sbjct: 274 GYNSLSSFSNIFKKIIGVPPTEYQHKLRG 302 >UniRef50_B4SKF1 Transcriptional regulator, AraC family n=2 Tax=Stenotrophomonas maltophilia RepID=B4SKF1_STRM5 Length = 267 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 107/247 (43%), Gaps = 1/247 (0%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 P + + H H GQ G + ++ + PP YA+WIP Sbjct: 16 PTFSQLPGPIYFRQGAMEPTNWGTHSHPWGQFNFVAQGVMEMKIDGEWMVSPPHYAIWIP 75 Query: 72 GGVEHSNQVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130 G+ H ++ + ++ P+ +P C L++SPL REL+ LA + T P Sbjct: 76 PGMAHYSRNRSALAYRSAYLSPALSRRLPVRCHALEVSPLLRELLHELAQQGVTDPKTPA 135 Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190 +R+ V+ D++ LPV+S ++ ++ + K ++ A MS R Sbjct: 136 QKRMAAVVIDQIVNAAVLPSFLPVASSDVLKQVMVHVEKHLSAAESVADIARRHHMSVRK 195 Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250 L RL E G+S WR +++ + A + L + ++A LGY +AF MFK+ Sbjct: 196 LERLARSELGMSLGDWRGRVKFVRATEALCTRRPISRIAEELGYSGVSAFAEMFKRHAQC 255 Query: 251 TPGRYIA 257 TP +Y Sbjct: 256 TPDQYRK 262 >UniRef50_Q5LMG8 Transcriptional regulator, AraC family n=1 Tax=Ruegeria pomeroyi RepID=Q5LMG8_SILPO Length = 238 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 65/234 (27%), Positives = 97/234 (41%), Gaps = 2/234 (0%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 V D S H+H + QLI A+ G + + +PP Y + +P H Sbjct: 5 PHDVVGYARDYRDGYVSVRHRHPRHQLIYAISGLMMAETDAMSHAIPPGYGLIVPAQQPH 64 Query: 77 SNQVTANAELCFLFIEPSAVTMPT--TCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134 ++ L L++ C + ISPL +LI L P L Sbjct: 65 EIRMIGAVRLQSLYVRAGLPRADALARCRLVTISPLLAQLIAALCEMANPWPMPPRALHL 124 Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 Q++ EL P L LP + P++R + + + P +L WA MS R +R Sbjct: 125 SQLILIELLAAPVSPLALPYPTDPRLRRVCDGLIATPASPRSLDDWAAEAGMSRRTFSRH 184 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGL 248 ETGLSF +W Q+L+ AL+GL KG +VA LGY + M ++ Sbjct: 185 FQLETGLSFGKWAQRLRCQAALRGLAKGRPAARVARELGYANAYTMAAMMRRMT 238 >UniRef50_Q0B8S9 Transcriptional regulator, AraC family n=1 Tax=Burkholderia ambifaria AMMD RepID=Q0B8S9_BURCM Length = 261 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 69/230 (30%), Positives = 101/230 (43%), Gaps = 1/230 (0%) Query: 32 TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91 SP H H GQL+ GA + L + P A WIP + HS + ++I Sbjct: 29 ESPRHVHSCGQLLYPERGAALLETPHHLVRLGPGQAAWIPPDLPHSILMGRPYRYHSVYI 88 Query: 92 EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151 PT +SPL +ELIL T + + +V+ E+ + P+ Sbjct: 89 GAGLYAEPTF-SVSHVSPLLKELILDAERWDDTDASSDVRFWKTRVIVAEIRRAPRVAAG 147 Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211 +P+ P+I + + P + LG WA SE+ L R VK TGLSF+QWR + Sbjct: 148 MPIPDDPRISVICRALEIDPADARMLGDWARQVGASEKTLQRAFVKSTGLSFQQWRTHAR 207 Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTT 261 + AL G + VA +GY S A+ F++ G +PGR R T Sbjct: 208 MTKALAMHRCGARLLDVAVAVGYSSEGAYAHAFRQFYGYSPGRMKPRSTG 257 >UniRef50_D1UHS6 Transcriptional regulator, AraC family n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UHS6_9BURK Length = 276 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 70/257 (27%), Positives = 113/257 (43%), Gaps = 3/257 (1%) Query: 20 VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79 + + P H H+ Q++ A+ GA+T + ++ P+ AVW+P G+ H Sbjct: 17 LTVRAQFIPAQRFFPEHSHQWHQMVYAISGALTVISDGGSIVISPEQAVWLPTGLRHRVG 76 Query: 80 VTANAELCFLFIEPSAVT--MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137 +E L+I + + +SPL R LI+ + R+ Q+ Sbjct: 77 SLLGSEFRSLWIADETGSTLAGVSPMVFAVSPLLRALIVEATAIAGQPDDDGYVGRITQL 136 Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197 + D+L + LP + + E + P + +WA MS R LAR V Sbjct: 137 ILDQLRRARPLPTALPWPRDDTLAQLCEKLHADPADPRGPEEWAQRLGMSARTLARRFVA 196 Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY-I 256 ETG+S R WR++L+L A++ L G V + A LGY ST+AFI F+ LG +P + Sbjct: 197 ETGMSLRSWRRRLRLFRAIELLGGGMDVTRTALELGYSSTSAFIYAFRLELGSSPQAFMR 256 Query: 257 ARLTTVSPQSAKPDPRQ 273 R V+ P + Sbjct: 257 GRSDRVASDPVTPSQQD 273 >UniRef50_A9BQK3 Transcriptional regulator, AraC family n=8 Tax=Burkholderiales RepID=A9BQK3_DELAS Length = 309 Score = 206 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 72/287 (25%), Positives = 120/287 (41%), Gaps = 24/287 (8%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 M L+ + + V H + H H Q+ ++L G + + Sbjct: 1 MEPVEALHPHLFVPTPQRPVRAKQHRLSARTRVIPHSHSWAQIAISLDGVLHLSAPQGTL 60 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFI-------EPSAVTMP-----------TTC 102 + PP AVWIP G+ H+ + A+L +++ P +P C Sbjct: 61 IAPPSKAVWIPPGLVHAVAMVEEADLVSIYVLQDDPAQGPVLPDLPSCGVACNPQDWARC 120 Query: 103 CTLKISPLCRELILTLANRTTTQRAEP-----MTRRLIQVLFDELPQQPQQQLHLPVSSH 157 L++SPL RELI L ++ Q A L +L +EL + + L + + Sbjct: 121 RVLEVSPLMRELITALPKQSDDQPAPDAATLQREHHLSALLLEELRRASEVHLGVNMPQD 180 Query: 158 PKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQ 217 ++R + E + P + +L WA S R +ARL ++ G SF WRQQ+ L L Sbjct: 181 KRLRMLCEAVVADPTQHESLADWAADTGASPRTVARLFQQQLGCSFTTWRQQVVLAHGLS 240 Query: 218 GLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSP 264 +G +Q++A LGY S +AF M + +G P R+ + + Sbjct: 241 LAARGLPIQQIAAELGY-SPSAFSAMVHRTVGMPPARFFGQQAGSAA 286 >UniRef50_D1XNW1 Transcriptional regulator, AraC family n=1 Tax=Streptomyces sp. ACTE RepID=D1XNW1_9ACTO Length = 291 Score = 206 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 107/247 (43%), Gaps = 5/247 (2%) Query: 19 AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78 A+ + + H H +L+ G +T V + ++ V + +W+P G H Sbjct: 37 AIVAGLRIPSVPTEWSPHAHPLHELVWVRGGTLTSRVRDRVFTVSTGHGLWMPAGTTHGG 96 Query: 79 QVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137 +VTA A F P ++++PL L+ L+ A ++ Sbjct: 97 RVTAGARFYEAFFAPDRAPFAFEEPRAIEMTPLLESLLNHLSRTDLDAAARARAESVVYD 156 Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197 + Q ++Q L + +I + E + P + +L +WA +S+R + R + Sbjct: 157 VL----QPSERQFALQLPGDARIDVIAEALLDDPADCRSLEEWARLLGISDRTVTRAFRQ 212 Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 TGLSF QWRQ L++ AL L +G V V+ LGY + FI F+K +G TPG + A Sbjct: 213 ATGLSFAQWRQALRVHRALALLSEGLDVTTVSEVLGYAQPSTFIASFRKVVGTTPGAFSA 272 Query: 258 RLTTVSP 264 + Sbjct: 273 SAGSAPE 279 >UniRef50_D2BBL9 Transcriptional regulator, AraC-family n=18 Tax=Actinomycetales RepID=D2BBL9_STRRD Length = 278 Score = 206 bits (525), Expect = 6e-52, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 117/255 (45%), Gaps = 7/255 (2%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 H + + H H + Q++ A G ++ T + W+ P A+WIP G Sbjct: 6 HNPRASTGLRPLPAGAGIDAHWHDENQIVYAGRGVLSVTTDAGSWIAPAIRAIWIPAGTV 65 Query: 76 HSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134 H ++ + +L + + + + + PL RELI+T + RRL Sbjct: 66 HEHRAYGDTDLHLVGLPVKDNPLRLDQPAVISVGPLLRELIITYTEQP--ADLTAERRRL 123 Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 VL D L QQ +H+P + P++ + ++ P + L + +S+R L RL Sbjct: 124 RAVLLDRLRHSAQQPVHVPAARDPRLVAVCAILRDNPADNRTLARLGAVAGVSDRTLTRL 183 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 E G+SF QWR QL+L AL L + V VAH G+ S++AFI +F++ G TPG Sbjct: 184 CRAELGMSFPQWRTQLRLHYALLLLAEDTPVTAVAHRCGWASSSAFIDVFRRAFGHTPGT 243 Query: 255 YIARLTTVSPQSAKP 269 + +SP + P Sbjct: 244 HR----ALSPTATAP 254 >UniRef50_D0L975 Helix-turn-helix-domain containing protein AraC type n=3 Tax=Corynebacterineae RepID=D0L975_GORB4 Length = 259 Score = 206 bits (524), Expect = 8e-52, Method: Composition-based stats. Identities = 70/258 (27%), Positives = 110/258 (42%), Gaps = 4/258 (1%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 M + V H H Q++ A G + T + W Sbjct: 1 MSETRQYGEIAAESAPNPTVD-AADRHPGGHRIARHHHLTHQIVYASSGLVEVTTQAGTW 59 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLA 119 + PP A+WIP H ++ N E + IEPSA + ++ L RELI+ + Sbjct: 60 VAPPDRAIWIPALAWHEHRFYGNTEFNCVSIEPSARPFADDAPVVVAVTGLVRELIVEGS 119 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 T+ P +RL VL D+L + + L L S ++ ++ +L Sbjct: 120 R--TSDPTCPAQQRLRSVLLDQLRRTDETALSLRTPSDDRLVHACAIVTADLTRNHSLAD 177 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 S+R L+RL+ E GL++ QWR ++L AL L +G V +VAH G+ + +A Sbjct: 178 LGRTVGASKRTLSRLLRDELGLTYPQWRTSVRLHRALILLAEGAGVTEVAHRCGWATPSA 237 Query: 240 FITMFKKGLGQTPGRYIA 257 FI +++ LG TPG A Sbjct: 238 FIDAYRRVLGHTPGSRRA 255 >UniRef50_Q3JG82 AraC family regulatory protein n=50 Tax=Proteobacteria RepID=Q3JG82_BURP1 Length = 902 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 78/257 (30%), Positives = 122/257 (47%), Gaps = 3/257 (1%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 VA E T+ H H +GQL+ A G ++ +++ W+VP +AVWIP Sbjct: 104 EGPFVAAVELTQRTERTTARHSHARGQLVGASSGLVSIGLDDEDWVVPAIHAVWIPPHRV 163 Query: 76 HSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134 HS + +F+ +P + +S L RE + A+ + R+ Sbjct: 164 HSLRSFGPFAGWSVFVAEDRCAALPGAPRAIVMSTLLREAVRRAASW-RGAALDAARARI 222 Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 V+ DE+ LP P++R + + +A + +WA + M+ R L+R Sbjct: 223 ANVILDEIAAAQTGPRGLPRPRDPRLRRIADALAGDLADNRRADEWAAWAGMAPRTLSRR 282 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 V ETG +F QWRQQ +++ AL+ L G TV VA LGYD+ +AFI MF++ LG TPG+ Sbjct: 283 FVSETGFTFTQWRQQARVLRALERLADGVTVTAVALDLGYDNVSAFIDMFRRTLGTTPGQ 342 Query: 255 YIARLTTVSPQSAKPDP 271 Y+ + P P Sbjct: 343 YVNA-RAGDARDGAPAP 358 >UniRef50_A0KEB0 Transcriptional regulator, AraC/XylS family n=25 Tax=Proteobacteria RepID=A0KEB0_AERHH Length = 274 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 75/262 (28%), Positives = 137/262 (52%), Gaps = 4/262 (1%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 M L + ++PD+H +A+ G S HQH++ QL+ A G +T +++ + Sbjct: 1 MAFILPDHPFDPDQHDGSAIGIASALGW--HDSGRHQHKRHQLLFAQAGCMTIELDDQVC 58 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120 ++PP A W+P G+ H + L+ +P +PT L ++PL RE+I +A Sbjct: 59 LLPPTRAAWLPAGLPHRVLMRGVVAYRSLYFQPE-PGLPTEMAVLAVNPLLREIIERMAI 117 Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180 + + +L +EL Q P++ LP+ S P++ ++ + +G L + Sbjct: 118 WPWD-KPAAEQHCTLALLQEELAQAPRESWQLPLPSDPRLAGWLQEVKRGDTLPDRLNRL 176 Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240 A S++ + R+ ++ETG+S++ WRQQ +L+ AL+ L + + + +VA TL + S +AF Sbjct: 177 AERVGASDKTIGRIFMRETGMSYQAWRQQWRLLRALELLAEAEPISRVAATLEFASDSAF 236 Query: 241 ITMFKKGLGQTPGRYIARLTTV 262 I+ F++ GQTP RY+ Sbjct: 237 ISFFRQHTGQTPLRYLNSRGES 258 >UniRef50_B5XX95 Transcriptional regulator, AraC family n=7 Tax=Enterobacteriaceae RepID=B5XX95_KLEP3 Length = 266 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 65/236 (27%), Positives = 113/236 (47%), Gaps = 9/236 (3%) Query: 26 AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85 + P H H +GQL+ A G + E+ W++PPQ A+W+P HS + + + Sbjct: 32 SYQRGEVDPPHHHVEGQLLFATRGVMLVQTESDRWVIPPQRALWLPPLHIHSYHLLSQTD 91 Query: 86 LCFLFIEPSAVTM------PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLF 139 L ++ S + + +PL +ELI L + A P R++ +L Sbjct: 92 LRAVYFSSSLIAECTSFTKSQQVHVITATPLVKELIAGLFS---EDYARPSQRKIALLLL 148 Query: 140 DELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKET 199 + L + P + LP+ + ++ + + +L + A AMSER +RL +K+T Sbjct: 149 EILSEAPPLTMALPMPNDERLFSAARSLLVNQRWEASLSELAFMSAMSERTFSRLFMKDT 208 Query: 200 GLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 G SFR W+Q+ ++ +L L G +++VA+ LG+ AF F+ LG TP + Sbjct: 209 GFSFRTWKQRARICASLDLLTNGVPIKQVAYQLGFSCPAAFTAAFRCILGATPRDF 264 >UniRef50_A5U9G2 AraC-family transcriptional regulator n=12 Tax=Mycobacterium tuberculosis complex RepID=A5U9G2_MYCTA Length = 263 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 4/229 (1%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 H+H Q++ GA++ T W+ P A+WIP G H ++ + + Sbjct: 17 PPGARIERHRHPSHQIVYPSAGAVSVTTHAGTWITPVNRAIWIPAGCWHQHKFHGHTQFH 76 Query: 88 FLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146 + ++P P T L ++PL REL++ + T R++ VL D+LP Sbjct: 77 GVALDPQRYRGGPATPTVLAVNPLMRELVIACSQADRTDT--DEHHRMLAVLQDQLPTTS 134 Query: 147 -QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 ++ L +P + ++R ++A + L Q G +S+R L+RL E G++F Q Sbjct: 135 IREPLWVPSPTDRRLRHACALIADNLTQPLTLQQIGGRIGVSQRTLSRLFSDELGMTFPQ 194 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 WR QL+L AL L + V VA G+ + +AFI +++ G TPG+ Sbjct: 195 WRTQLRLQHALVLLAERHDVTSVASECGWATPSAFIDTYRQAFGHTPGQ 243 >UniRef50_A5FK83 Transcriptional regulator, AraC family n=3 Tax=Bacteroidetes RepID=A5FK83_FLAJ1 Length = 273 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 6/241 (2%) Query: 21 AFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV 80 +C H EL P H+H K QL+ A + T E + +P ++ +WIP GVEHS + Sbjct: 23 IYCHHDLMGELFIPPHRHVKAQLLYAEGDVVFVTTETKTYFLPARHFIWIPSGVEHSIEP 82 Query: 81 -TANAELCFLFIEPSAV--TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137 + + + L+ ++ L +++L + + + Sbjct: 83 KSESVTMRNLYFPVEKDENDFYKVEGIYPVNNLLLQMMLFTNRWNGDLKKGTPNFAIAKA 142 Query: 138 LFDELPQQPQQ--QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 + LPQ L LP ++ ++ + E A F SER+L RL Sbjct: 143 IKAILPQICTNNLPLELPQPKDKRLSKILRYIENNLGETILFADVAHEFGFSERSLYRLF 202 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 K+ G+SF Q+ +++ A++ L++ +V++VA +GY+S F F K LGQ P Sbjct: 203 QKDLGMSFIQYYTIRRILKAIELLLERKLSVKEVAEEVGYNSVPTFSNTFFKILGQRPSD 262 Query: 255 Y 255 Y Sbjct: 263 Y 263 >UniRef50_A0KTL0 Transcriptional regulator, AraC family n=25 Tax=Gammaproteobacteria RepID=A0KTL0_SHESA Length = 292 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 70/230 (30%), Positives = 116/230 (50%), Gaps = 8/230 (3%) Query: 35 VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94 +H+H QLIL L G + AL++VP A+++P GV H + + +++ P Sbjct: 57 LHKHCWHQLILPLQGLLQTEANGALFLVPHTTALFVPAGVIHESVAITDTCFIGVYLNPM 116 Query: 95 A-VTMPTTCCTLKISPLCRELILTL-------ANRTTTQRAEPMTRRLIQVLFDELPQQP 146 T + +S REL+LT+ + A P +RL++VL+D++ Sbjct: 117 CGRDYGATIKPVAMSAFLRELVLTIRKQCVFNTSMNVEPIALPTIQRLLEVLYDQINSAE 176 Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206 Q L + +++ + E + + P +L +W SER L+RL V+E G SF W Sbjct: 177 GQTFKLLIPQDRRLKLIFEHLTQTPALDLSLAKWGEMVGASERTLSRLFVREFGSSFGLW 236 Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 RQ L+LI +L L ++Q VAH +GY + +++I FK+ G TP R+ Sbjct: 237 RQHLRLIYSLSLLATNLSIQNVAHQIGYQNDSSYIKAFKERFGMTPQRFR 286 >UniRef50_Q1ZV01 Transcriptional regulator, AraC family protein n=2 Tax=Photobacterium angustum S14 RepID=Q1ZV01_PHOAS Length = 283 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 11/257 (4%) Query: 8 NGYEPDRHHEAAV---AFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPP 64 ++PD V A H L S +H H KGQL+ G +EN+ + + P Sbjct: 17 KHFDPDAIKSPIVPIYATFSHKEEHSLRSKMHSHSKGQLVYIKSGTAIVRLENSTYSILP 76 Query: 65 QYAVWIPGGVEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTT 123 +WIP G+ H+ + N + ++I+ + T +S L E+I T+ + Sbjct: 77 NQMIWIPSGMIHNVILRNNVDFRAIYIDQKQFPRLSKNFETFFVSVLLEEIIETICLSSF 136 Query: 124 TQRAE-PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEW---GALGQ 179 L +L ++ + + + + K + L + Sbjct: 137 HTDWMVGTEFHLQSILIMKMQKLSSTPQWPAFPKDKR---VCNYLLKFYEKGEMFPRLYE 193 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 SER + RL V+ TG+S+++WRQ +L++A++ L ++ ++AH L + +T+A Sbjct: 194 LVSNTGASERTIHRLFVQSTGMSYQKWRQHARLMLAIELLSTNKSITEIAHHLEFSTTSA 253 Query: 240 FITMFKKGLGQTPGRYI 256 FI+ FK TP +Y Sbjct: 254 FISFFKSYQNITPKKYR 270 >UniRef50_A8L2S5 Transcriptional regulator, AraC family n=3 Tax=Actinomycetales RepID=A8L2S5_FRASN Length = 263 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 70/238 (29%), Positives = 99/238 (41%), Gaps = 4/238 (1%) Query: 24 IHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTAN 83 + TD H H QLI G + W+VPP AVW+P GV H++Q Sbjct: 28 LRRLTDRERIDWHDHTDHQLIYPGTGVLRVVTRVGSWVVPPLRAVWLPAGVAHAHQAHGP 87 Query: 84 AELCFLFIEPSAVTMPT-TCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDEL 142 + L + + + L RE+I L T A R L VL L Sbjct: 88 THMHSLAFSDVDDPFGSPDPTVVAVPALLREIIRALTA---TGLAGADRRDLTAVLLRSL 144 Query: 143 PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202 + +L LP ++ + +A P + L + SER L+RL ++TG++ Sbjct: 145 RPVTELRLCLPQPRDDRLVALTAALAADPADPRTLAELGAAVGASERTLSRLFRRQTGMT 204 Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260 F QWR QL+L L L G+ V VA GY + +AF F+ G TP RY Sbjct: 205 FPQWRAQLRLHHGLTLLAGGEPVTTVAFACGYSNPSAFTAAFRDAFGVTPARYARETR 262 >UniRef50_D1BGA1 DNA-binding domain-containing protein, AraC-type n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BGA1_SANKS Length = 293 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 108/251 (43%), Gaps = 4/251 (1%) Query: 6 NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65 +P +V+ + H H +L+ G +T + +MVP Sbjct: 6 QPAALDPPAPRVRSVSSRHFPPSGPDRWDSHSHDVHELLWGAEGVLTVETADGYFMVPAV 65 Query: 66 YAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTT 124 +WIP GV H+ Q +++ + ++PL REL++ +A Sbjct: 66 LGLWIPAGVAHAVQCAGGTGFWCTYVDADVRPEFTGRTTAVTVTPLLRELLVHMAAEP-- 123 Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184 + + L + LP+ + ++ ++ + P + +L W Sbjct: 124 -MRAEVRDASAALAVALLEAVDMSPMVLPMPTDARLASIARALLDDPGDRRSLDDWGTEV 182 Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244 ++S RNL+RL +ETG++F QWR ++ +A+ L G +V V+ +GY + +AF+ F Sbjct: 183 SVSVRNLSRLFHRETGMTFAQWRVHARVRLAVGLLASGLSVGTVSRRVGYSTPSAFVQSF 242 Query: 245 KKGLGQTPGRY 255 ++ LG TPG Y Sbjct: 243 RRVLGHTPGWY 253 >UniRef50_B9TN09 HTH-type transcriptional repressor of iron proteins A, putative n=1 Tax=Ricinus communis RepID=B9TN09_RICCO Length = 221 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 64/218 (29%), Positives = 97/218 (44%), Gaps = 6/218 (2%) Query: 44 ILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANA-----ELCFLFIEPSAV-T 97 + G I ++PP WIP + H+ V N + + PS Sbjct: 2 YIPAQGVILVEAGGNRQVLPPGRLGWIPPLMPHAASVHGNTLRPGLAGHTIHLAPSLCVG 61 Query: 98 MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSH 157 P L++SPL L+ + + RL+ V DE+ LHL + H Sbjct: 62 FPAQSLALRMSPLAVSLMERMFRWPNGTPPDAAGLRLMNVFLDEMRAAAPDPLHLVMPRH 121 Query: 158 PKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQ 217 P++ M +A+ P + L WA S R+L R ETG+S WRQ +L ++ Sbjct: 122 PRLLAMAATIAENPADETDLDAWAQQLGWSRRSLTRHFRNETGMSVVAWRQVARLQKGME 181 Query: 218 GLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 L G +V VA +LGYDS ++FI +F++ LG TP R+ Sbjct: 182 LLNGGASVTTVALSLGYDSVSSFIALFRRILGTTPARF 219 >UniRef50_D1XRU9 Transcriptional regulator, AraC family n=4 Tax=Actinomycetales RepID=D1XRU9_9ACTO Length = 272 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 66/251 (26%), Positives = 102/251 (40%), Gaps = 4/251 (1%) Query: 6 NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65 N++ + D A + H+HR+ Q + G + W VPP+ Sbjct: 3 NVSLADVDHVDRAVLPIGTDY-PPGHVLDWHRHRRAQFLYGATGVMVVDTAEGTWTVPPE 61 Query: 66 YAVWIPGGVEHSNQVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTT 124 AV IP H ++ L+IEP AV P TC +++ PL REL+L + Sbjct: 62 RAVLIPAATRHRVRMLG-VSTRSLYIEPGAVPWWPGTCTVVEVPPLLRELLLVAVDLPLD 120 Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184 ++++L E+ ++ H+ + + + P WA Sbjct: 121 YSLAGREGSIVELLLHEIAERAPLPFHVAIPVSADLAGLCRAYLAAPDAGVTNAAWAART 180 Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244 AMSER R ETG S WR + +L+ A+ L +V +VA LGY S AF F Sbjct: 181 AMSERAFTRRFRAETGDSPAVWRSRARLLAAVPLLR-TASVSEVAGRLGYASPAAFTAAF 239 Query: 245 KKGLGQTPGRY 255 + G P R+ Sbjct: 240 TRAFGLPPSRF 250 >UniRef50_C3JM12 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus erythropolis RepID=C3JM12_RHOER Length = 278 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 71/255 (27%), Positives = 110/255 (43%), Gaps = 7/255 (2%) Query: 3 HRLNLNGYEPDRHHEAA---VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENAL 59 H + + P A + I P H H + +LI + G + +EN L Sbjct: 20 HLRESDRHTPMARAVPAPFQLTTYIVETDHITRWPEHAHVEHELIWSDRGVVNMIIENQL 79 Query: 60 WMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTL 118 W V P +WIP GV H Q + P C + +S R L++ L Sbjct: 80 WTVTPGVGLWIPRGVLHEGQANPHVAFRATLFTPELWTPAWNEPCIVTLSEAARALLIHL 139 Query: 119 ANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALG 178 A+ T R QV D L +P+ P++R +V+ + P + +L Sbjct: 140 AH---TGMPAEQRLRAQQVCVDLLTPASAPHFDVPIPRDPRLRMLVDKVLSDPADDRSLD 196 Query: 179 QWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTT 238 QWA +S R + R+ E LSF QWR +++ AL L G +V V+ +GY +++ Sbjct: 197 QWAHVLNLSRRTVTRIFAAELALSFAQWRTLVRMSTALGMLGTGMSVNAVSRRVGYGTSS 256 Query: 239 AFITMFKKGLGQTPG 253 +FI F+K +G TPG Sbjct: 257 SFIAAFRKTVGYTPG 271 >UniRef50_A0KHN7 Transcriptional regulator, AraC family n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KHN7_AERHH Length = 268 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 1/267 (0%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 M L + + + S H H GQL L G + +++ + Sbjct: 1 MPYLPYLDQDAKLAAPNPLYLRYQQIQADSASAPHSHPWGQLSLISLGVMEIVLDDHRLV 60 Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLAN 120 P Y +W+P +EH++ + +++ A +P L+++PL R ++ + Sbjct: 61 APADYLIWVPADLEHASYNQQALDYTSIYVNHALAARLPAEPRLLQMTPLIRAILADFCD 120 Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180 R + R ++L ++L + Q +LP+S + M+ + P + L QW Sbjct: 121 RKLGHMEDEWDVRQAELLVEKLTRTRCQDSYLPMSQDKLLAPMLAALHSDPADPRTLAQW 180 Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240 A +ER LAR V+E G++F QWR +L+L+ AL L VQ++ LGY ST+AF Sbjct: 181 AEQLHTTERTLARRCVRELGMNFGQWRARLKLLKALAWLKGELPVQEIGWRLGYGSTSAF 240 Query: 241 ITMFKKGLGQTPGRYIARLTTVSPQSA 267 I MF + LG +P RY +L + Q+A Sbjct: 241 IAMFNRELGCSPQRYRQQLGIGAGQAA 267 >UniRef50_B4SPX2 AraC protein arabinose-binding/dimerisation n=2 Tax=Stenotrophomonas maltophilia RepID=B4SPX2_STRM5 Length = 266 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 6/262 (2%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 M L + + D +A I A + S HQH + QL+ G T + + + Sbjct: 5 MAWLQPDAH-FDADAWSAPVLGIAASLADHDSGWHQHARAQLLYTRQGCTRLTYGDRISL 63 Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLAN 120 +PP A WIPGG+ H Q+ + L+ + + +P + + PL + L+ +A Sbjct: 64 LPPARAAWIPGGLRHRAQMRQAVDYRSLYFDATLSAQLPRQPAIIGVGPLLQALLEPIAQ 123 Query: 121 RTTTQRA-EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 Q P + + E+ P + LP+ P+I + + + P E LG+ Sbjct: 124 APFDQDWQAPRAHHQLALCVLEIAAAPVAPMDLPLPRDPRIARCLPLAEQLPPE---LGE 180 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 A +S R + RL+ ++TG+S++ WRQQ +L+ A++ L+ G V VA G+ + + Sbjct: 181 LAARTGLSARTVGRLMQRDTGMSYQAWRQQWRLMRAMELLLLGHRVAHVAQDTGFSAESP 240 Query: 240 FITMFKKGLGQTPGRYIARLTT 261 FI F+ G TP + Sbjct: 241 FIAFFRSMTGTTPAAFQRHAKG 262 >UniRef50_C3X452 Putative uncharacterized protein n=2 Tax=Oxalobacter formigenes RepID=C3X452_OXAFO Length = 254 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 105/239 (43%), Gaps = 7/239 (2%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 + P H + + G + E W V P W+P + + + Sbjct: 15 PAGIAQPGHAQNESWFVYLEKGFLAVEDERGYWTVLPGRIGWMPPHFHYEIRAYGHVAGI 74 Query: 88 FLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTT------QRAEPMTRRLIQVLFD 140 + P +P L IS L ++ Q RL+QVL D Sbjct: 75 CASLTPLLCAGLPEIPSALAISSLVAPILERAVTWQPDGVGGVFQPLPARQERLLQVLLD 134 Query: 141 ELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETG 200 EL Q Q L + ++ + + K P E + +WA +S R+++R +ET Sbjct: 135 ELRYSSQGQARLLLPKDKRLNYLAREILKNPGERRTVEEWAERMRISSRSISRHFSRETN 194 Query: 201 LSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 ++F QWRQ LI+A++ L +G++V++ A ++GY++ +AFIT FKK GQTP ++ + Sbjct: 195 MTFAQWRQNASLIVAMKRLAEGESVREAARSVGYENVSAFITSFKKAFGQTPAQFRQQF 253 >UniRef50_C9PG34 Transcriptional regulator AraC family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PG34_VIBFU Length = 245 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 2/235 (0%) Query: 27 GTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL 86 + H H + QL G + E W V W P G H +V + E Sbjct: 11 HPQSAVTGWHTHLESQLFWVNRGILMVEAEQQRWTVASGCLAWNPAGCRHRTEVITDVEG 70 Query: 87 CFLFI-EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 L++ + + + ++ L LI L+ T ++ + + +L E+ Sbjct: 71 ELLYVQDATMLDAMPAPKLIRCDDLTSALIKRLSG-TEYNASDTCEQAWLALLGSEISHA 129 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 P L LP+ + R + + P + A F +S R L RL ++TG++F Sbjct: 130 PATPLQLPLPEDKRARKVANYLIAEPENRLSQETLAERFGLSSRTLHRLFRQQTGMTFVH 189 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260 WRQQ +L+ +L L G ++ +VA GYD+T ++I +F++ G TP Y+ + Sbjct: 190 WRQQSRLLHSLSLLEAGKSITEVALASGYDNTGSYIQLFRQRFGVTPKLYLRQRQ 244 >UniRef50_D1WVC3 Transcriptional regulator, AraC family n=3 Tax=Actinomycetales RepID=D1WVC3_9ACTO Length = 283 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 4/231 (1%) Query: 37 QHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAV 96 HR+ +L+ + G +T LWMVPP +W+P G H + +A A F+ P V Sbjct: 55 AHREHELLWSTTGNVTVEAAGHLWMVPPSLGIWLPAGTPHRVRASAGAVTYATFLSPELV 114 Query: 97 TM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVS 155 + + + L REL+L N + A RL +V D + L +P+ Sbjct: 115 AVDWAGVVGIPMIRLLRELLLHNQNEEMSTEA---RLRLQRVGVDLIRPVRTVSLDIPLP 171 Query: 156 SHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMA 215 P++ T+ E + P + +WA +S R L R ++TG+S QWR +++ A Sbjct: 172 KTPELLTIAERIIADPADDRTTEEWARMIGLSGRTLMRWFQRDTGVSLTQWRILVRVRSA 231 Query: 216 LQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQS 266 L + G V V+ LGY + + FI +F++ G TP Y + V+ Sbjct: 232 LIDIAAGKPVVAVSRRLGYANPSTFIDLFRQVTGHTPAAYFRSVNGVAEPG 282 >UniRef50_A0R133 Transcriptional regulator, AraC family protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R133_MYCS2 Length = 257 Score = 199 bits (507), Expect = 7e-50, Method: Composition-based stats. Identities = 67/248 (27%), Positives = 106/248 (42%), Gaps = 3/248 (1%) Query: 13 DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72 D +A E H+HR+ Q + + G + E+ W+VP + AV IP Sbjct: 9 DNLARDVLALATDYSYGE-VLAPHRHRRAQFLYGVGGTMDVRTEHGSWLVPTERAVLIPP 67 Query: 73 GVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131 +H+ + L+IEP AV PT C + + L REL++ + + Sbjct: 68 QTQHAVTMWG-VSTRSLYIEPGAVPWFPTRCTVVDVPTLLRELLVAAVAVPLDRPPDARD 126 Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191 L + E+ L LP+ + P G WA +SER + Sbjct: 127 AALFALTLHEVAGCTSLPLDLPLPQPGALSEQCRRFLAAPRIDTTTGWWANALHVSERTV 186 Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251 ARL KE ++ +W+++ ++ +L+ L +G V VA LGY S AF TMF + LG + Sbjct: 187 ARLFRKELSMTVAEWQRRACVLHSLRQLTQGVAVSAVASDLGYSSPAAFSTMFSRALGTS 246 Query: 252 PGRYIARL 259 P + R Sbjct: 247 PSAFSPRR 254 >UniRef50_Q13JN4 Transcriptional regulator, AraC family n=13 Tax=Proteobacteria RepID=Q13JN4_BURXL Length = 285 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 5/248 (2%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 P+ H +A L H H Q++ A+ G + V +VPPQ AVW+P Sbjct: 16 PELHDDADARSLARHYPRGLRIDPHSHTWAQVLYAVSGVMWVEVGREALVVPPQRAVWLP 75 Query: 72 GGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130 G +HS + + E+ L++ V + +++ L RELI ++A T +P Sbjct: 76 AGTQHSIHMMSEVEMRNLYLHERNVGHLSRRSDVFEVNGLLRELITSIAEYEGTGARDPA 135 Query: 131 TR-RLIQVLFDELPQQPQQQL--HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187 ++ EL P+ L LP +S ++ + + P + Q A S Sbjct: 136 YLDAAYRLAMLELAHAPRSSLRIALPDASDRRLEALCRAVIDNPSIAISFEQHAASVGAS 195 Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247 R LARL +E G+ F +WR+Q+QL +A+ L +G V +A +LG+ ++F MF++ Sbjct: 196 VRTLARLFTRELGVGFAEWRRQVQLAVAVSWLAEGRPVSSIARSLGFQ-PSSFSDMFRRE 254 Query: 248 LGQTPGRY 255 LG P + Sbjct: 255 LGAPPTGF 262 >UniRef50_D1BCS3 DNA-binding domain-containing protein, AraC-type n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BCS3_SANKS Length = 310 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 5/227 (2%) Query: 38 HRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT 97 HR+ +LI A G++T ++ LW VPP +WIP H + ++ P V+ Sbjct: 85 HREHELIWATAGSLTVETDDQLWTVPPGLGIWIPALTRHHVRAAPGTLTHVTYLAPERVS 144 Query: 98 --MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVS 155 + +S EL+L + T + RL QV+ D L L + + Sbjct: 145 PSWGAGIAGVTLSRAVHELVLHNKSSTLDDD---VRLRLQQVVVDLLVPVESASLDITMP 201 Query: 156 SHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMA 215 + ++R++ + + P + L +WA +S R L+R V+ETG++ +WR +++ A Sbjct: 202 TDLRLRSVADAIVADPADDRTLTEWADTLNISSRTLSRGFVRETGVTLTRWRILVRMRQA 261 Query: 216 LQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262 L + G +V VAH LGY + + F +F++ LG TP Y+ L Sbjct: 262 LLEISSGRSVAAVAHRLGYANPSTFTDLFRQTLGHTPAAYLRSLDAR 308 >UniRef50_C3JND7 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus erythropolis RepID=C3JND7_RHOER Length = 285 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 60/230 (26%), Positives = 105/230 (45%), Gaps = 3/230 (1%) Query: 26 AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85 A + T +H+H +L+ A+ G + ++ VP ++WIP V H + E Sbjct: 42 AVDSDYTWEMHRHSDHELLWAIDGVLEVRTPETVYTVPSGVSLWIPSFVPHEVTARSGTE 101 Query: 86 LCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 L ++ S VT L PL +++ L + RR D + Sbjct: 102 LSCTWLVASDVTGLDRVVALSTPPLLEQVLDHLTR---DDLTDAARRRAEAFAIDLVEPV 158 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 P+ +P+ + P +R + + + P + ++ +WA +S R L R ETGL+F + Sbjct: 159 PRLIFDVPLPTTPWLRQIADQLVASPADTRSVEEWAADAKVSTRTLTRRFPAETGLTFSE 218 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 WR +L+ A+Q L G ++ VA G+ S +AF F++ +G TPG + Sbjct: 219 WRMRLRAHHAMQLLALGRSISFVARKTGFRSESAFGAAFRRTMGVTPGEF 268 >UniRef50_C3JWU5 Transcriptional regulator, AraC family n=4 Tax=Rhodococcus erythropolis RepID=C3JWU5_RHOER Length = 274 Score = 196 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 5/242 (2%) Query: 28 TDELTSPVHQHRKGQLILALHGAI-TCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL 86 + + H+H + +LI G + T + W VPP +W+P G H+ + E Sbjct: 31 SHQRQWAPHRHPEHELIWGNSGGMLTVVADGITWEVPPSAGLWLPAGALHAVKAGPGTEF 90 Query: 87 CFLFIEPSAVTMPTT-CCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 + P A P+ +S L RE++L + R A R V FD L Sbjct: 91 FCTYFRPEAHAAPSGVPGLFGVSALLREVLLHMHRRNMPDEARSRAER---VAFDMLQPL 147 Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205 + +P+ + P+ + E + P + +L +WA S R L R+ + TG++F Q Sbjct: 148 EVAAVEVPMPTDPRALFVAEALVANPADQRSLSEWALTAGGSVRTLTRVFAQGTGMTFAQ 207 Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ 265 WR Q+++ AL L G V V+ +GY++ +AF+ +F++ G+TPG + + + Sbjct: 208 WRIQVRVRAALTYLAAGVPVSVVSRRVGYETPSAFVAVFRRVTGRTPGSMMNKGSVAPES 267 Query: 266 SA 267 Sbjct: 268 VP 269 >UniRef50_Q212B5 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q212B5_RHOPB Length = 268 Score = 196 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 62/244 (25%), Positives = 108/244 (44%), Gaps = 3/244 (1%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 D AA+ + D T +HQH G+L L G + N W++P + W+P Sbjct: 18 IDGLDGAAMRSALTKTLDVFTRGLHQHPHGELFLLRAGYLKAQSPNGRWLIPAGHLCWVP 77 Query: 72 GGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQR-AEP 129 EH + + +++ P +P C ++ + L +I L T + Sbjct: 78 PFTEHGADTDS-TQGVRIYLAPELCGVLPRDSCVMRNTALILAVIDRLTAPDRTAKVLTE 136 Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 +RL+ VL DE+ + + LP+ ++ E + P + L +A MS R Sbjct: 137 PEKRLLGVLCDEIERARSTPILLPMPQDARLSRTAEKLLGSPNDQSDLDVFAAEAGMSRR 196 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249 + R +TGLS +WRQ +L+ + L G +V + A LGYDS ++F+ + ++ G Sbjct: 197 SFTRNFKLDTGLSIGEWRQIARLMHGIDMLAAGKSVTETAFALGYDSISSFVALCQRHTG 256 Query: 250 QTPG 253 +P Sbjct: 257 MSPK 260 >UniRef50_C0YKZ5 AraC family transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YKZ5_9FLAO Length = 260 Score = 196 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 110/252 (43%), Gaps = 7/252 (2%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 + D + + + H H+KGQL+ G T+E ++++P +AVWI Sbjct: 8 KIDELKKPYFVWFEENWVHDDVF--HHHQKGQLVYVESGFQYITIEEKIYLLPQNHAVWI 65 Query: 71 PGGVEHSNQVTAN-AELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAE 128 P H + +L +F + S + P+ +E+I + ++ Sbjct: 66 PPNAVHKTNSHSEKIKLMIMFADISTDNPFYHEISVFSVPPVLKEMIKYSEKWSKLMISD 125 Query: 129 PMTRRLIQVLFDELPQQ--PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAM 186 ++ LF+ELPQ LH+ + ++ ++E + + + + + Sbjct: 126 YNETLFLKTLFNELPQFVKHSLTLHICLPKDKRLTKVIEHLHSHYLNEIKMEDLSDAAFL 185 Query: 187 SERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKG-DTVQKVAHTLGYDSTTAFITMFK 245 S R L R+ KETGL+ +++Q L++I +L+ L G T+ + A+ +GY S AF F+ Sbjct: 186 SFRTLERIFKKETGLTLSKYQQMLRIIKSLELLSSGTLTISETAYEVGYKSVQAFTRSFQ 245 Query: 246 KGLGQTPGRYIA 257 + P +I Sbjct: 246 AVMQFRPTDFIK 257 >UniRef50_B0TZR0 Transcriptional regulator, AraC family n=1 Tax=Francisella philomiragia subsp. philomiragia ATCC 25017 RepID=B0TZR0_FRAP2 Length = 264 Score = 196 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 81/264 (30%), Positives = 132/264 (50%), Gaps = 2/264 (0%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 M L + ++ + A + S H H + QLIL G I VE +W Sbjct: 1 MQDTLTTD-FDLSSYPNALIVLKSQIKDCNEESEYHSHSEAQLILPTKGLIQSNVEAKIW 59 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLA 119 VP A+WIP V HSN +T ++C F++ V MP C L ISPL +ELIL L+ Sbjct: 60 AVPLGSALWIPSYVYHSNLITKGGQMCMTFVDKLMLVNMPKKACVLYISPLIKELILYLS 119 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 +T ++ +++ VL D+L + + + S ++ + P ++ + Sbjct: 120 QQTVLEQLNYENQKIASVLIDQLSKMLPTFYNFSLPSEKILQEVAFQWLSKPTKYKYISD 179 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 A ++S + LAR I K+ G++F W++QL +++ALQ L +G +V V+ LGY+ST+ Sbjct: 180 MAYECSVSSKTLARKIKKDIGMNFSDWKKQLHIVVALQKLYEGYSVNWVSEYLGYESTST 239 Query: 240 FITMFKKGLGQTPGRYIARLTTVS 263 F+T FK+ +P RY+ S Sbjct: 240 FVTFFKRIFKCSPKRYVKNYCQNS 263 >UniRef50_Q28KW4 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28KW4_JANSC Length = 253 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 3/233 (1%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 V++ S H H + Q+I ++ G + E W VP + + +P G+ Sbjct: 14 PYEVVSYRKTYE-SGYRSDWHSHPRHQIIYSVSGLMMTDTEGVRWAVPSGFGLIVPAGIA 72 Query: 76 HSNQVTANAELCFLFIEPSAV--TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRR 133 H+ ++ + + L++ PS+ + +C + IS + LI L R Sbjct: 73 HTTKMIGDVSIETLYVSPSSRGRSAFESCRVVSISAMLASLISELCREELRDRNSRKAFH 132 Query: 134 LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193 L Q++F EL P L + P++R + + + P + QWA S R+ R Sbjct: 133 LRQLIFLELSDAPTSHLAVKYPVDPQLRRVCDALIADPANSWTIDQWAFEIGKSRRSFTR 192 Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKK 246 +T +FRQW Q+L+ +ALQ +G +++++A LGY S + M +K Sbjct: 193 AFYSQTDQTFRQWTQRLRCQLALQKRAEGQSLERIARDLGYGSRYSLEAMMQK 245 >UniRef50_C8QA12 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QA12_9ENTR Length = 282 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 4/246 (1%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 P+ AV+ + T H+H GQL G +T + ++ PP+ W+P Sbjct: 27 PNAPKVIAVSLSKELARERHT---HRHAAGQLYCLKQGLMTVNTPSGIFANPPRLVGWVP 83 Query: 72 GGVEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130 EH+ + + I+ A +P + + L LA T Sbjct: 84 PHFEHAIVGPGQVQGWTVLIDEVLAAPLPDHPVLMSCPAVLELLAERLATLTPALWGSER 143 Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190 RL QV DEL + Q L LP+ P++ + ++ P + + A + S R+ Sbjct: 144 YHRLGQVFLDELYEATVQPLTLPLPEDPRLLQIARLLIDSPSDMRTGPELARWAGFSPRS 203 Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250 L+R TG+S ++RQ +L+ +L+GL G++VQ+VA +G+++ +++I+ F+ G Sbjct: 204 LSRHWASATGMSLTKYRQTSRLLKSLEGLAAGNSVQQVAWQVGFENVSSYISAFRHAFGS 263 Query: 251 TPGRYI 256 TPG+Y Sbjct: 264 TPGKYF 269 >UniRef50_B5I4G1 AraC-family transcriptional regulator n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I4G1_9ACTO Length = 268 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 2/226 (0%) Query: 28 TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87 H H GQL A GA+ + W+ P +W+P HS++ ++ Sbjct: 29 AHGAEVAAHFHDYGQLRYAARGALVTATQVGTWVTPASRIMWVPPFAVHSSKAYGETDIR 88 Query: 88 FLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146 L + + +P S L RE L L + P R LI V+ EL + Sbjct: 89 VLSLPVTLTGQLPAEPSVFVASALLREAYLALMSEG-EPLESPRARLLIDVVLAELARAA 147 Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206 Q+ L LP S +++ + +++ P L + SER L+RL E +SF QW Sbjct: 148 QEPLRLPEPSDRRLKAVTDLLHMDPASPATLAELGHRAGASERTLSRLFGSELSMSFHQW 207 Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252 R L++ AL L G +V A LG+ + ++FI F + +GQTP Sbjct: 208 RTLLRIQRALIELSDGASVTATAIRLGWSNPSSFIDAFTELVGQTP 253 >UniRef50_A8L421 Transcriptional regulator, AraC family n=12 Tax=Actinomycetales RepID=A8L421_FRASN Length = 290 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 6/250 (2%) Query: 19 AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78 A+ + L + H H Q+ A+ G + A +++PPQ A WIP G+EH Sbjct: 28 ALGGSYLYEGERLVTGWHSHDLHQIEYAVAGVVEVETATAHYLLPPQQAAWIPAGLEHQA 87 Query: 79 QVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQ-RAEPMTRRLIQ 136 + + +P V P L ++PL RE+++ + +P+ Q Sbjct: 88 TMNTAVRTVSVMFDPRLVPHPGDRARILAVAPLIREMMIYALRWPIARAEHDPVADGFFQ 147 Query: 137 VLFDELPQQ--PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194 L + + + L LP S+ P + + + +G+ + +SER L R Sbjct: 148 TLGHLVSEALDHEAPLSLPTSTDPIVSAAMAYTQNHL-DSVTVGEVSRAVGVSERTLRRQ 206 Query: 195 IVKETGLSFRQWRQQLQLIMALQGLV-KGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253 GLS+R + Q +L+ A+ G +V +V+ +G+D+ +AF F + G+TP Sbjct: 207 FRSTLGLSWRSYLLQARLLRAMALFAVPGQSVLEVSTAVGFDNGSAFARAFSQYCGETPS 266 Query: 254 RYIARLTTVS 263 Y R++ Sbjct: 267 SYQRRISAAP 276 >UniRef50_B9K583 Transcriptional regulator n=3 Tax=Alphaproteobacteria RepID=B9K583_AGRVS Length = 251 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 63/248 (25%), Positives = 106/248 (42%), Gaps = 9/248 (3%) Query: 15 HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGV 74 F P+H H + QL A G + E W+VP Q AVWIP V Sbjct: 1 MPRHPFTFQRGFKQRGEGLPIHAHDEAQLTFAASGMVQVHTEEGRWLVPSQLAVWIPARV 60 Query: 75 EHSNQVTANAELCFLFIEPSAVTMPTTCC------TLKISPLCRELILTLANRTTTQRAE 128 H V +A+L + EPSA L+++PL + L+ ++ Sbjct: 61 PHRVDVLTDADLWMVHWEPSAAQEWAPPVPLDQTFALRVTPLMQSLLEAAFMADVSREKG 120 Query: 129 PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSE 188 + +L+ EL LP+ + + +M ++ ++A A S Sbjct: 121 ELVAKLM---LHELTSTAHAPTFLPLPTSTIGLRVADMALTDHQSLMSIDEFASRAATSV 177 Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGL 248 R L+RL ETGL+F+ WRQ+ +++ ++ L KG + +VA G+ S +F F++ Sbjct: 178 RTLSRLFPSETGLTFKAWRQRARIVQSMDLLAKGKPIARVAADFGFSSAASFSHAFRQVT 237 Query: 249 GQTPGRYI 256 TP +++ Sbjct: 238 AMTPTQFM 245 >UniRef50_A6SYJ9 Transcriptional regulator, AraC family n=2 Tax=Oxalobacteraceae RepID=A6SYJ9_JANMA Length = 249 Score = 193 bits (491), Expect = 5e-48, Method: Composition-based stats. Identities = 65/252 (25%), Positives = 117/252 (46%), Gaps = 10/252 (3%) Query: 20 VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79 + +H HR+ QL+ A G + T W+VPP AVW+P G+EH+ Sbjct: 1 MTIGARFYPRGTRLGLHVHREAQLLFASSGVMQVTTPKGHWLVPPARAVWLPPGIEHAVD 60 Query: 80 VTANAELCFLFIEPSAVTMPTTCCTLK------ISPLCRELILTLANRTTTQRAEPMTRR 133 + A+ E+ L I+P + L+ + PL RE IL + + Sbjct: 61 MLADIEMRALLIQPEQLAQHPAAPRLQSEFVATVGPLLRETILGAFKADSHPQ---RLAL 117 Query: 134 LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193 L+++ EL + + +P+ + R + +M+ P L A S R + R Sbjct: 118 LLELALFELVEDEDARTFMPMPHDARARRVADMILADPANGSELELLAYSAGASARTITR 177 Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTP 252 L ET L+F++WRQ+ +++ A++ L G +++++A LG+ S +F F++ +G TP Sbjct: 178 LFPAETNLTFKEWRQRARIMAAVEALGNGQTSIKQLALQLGFSSVASFGHAFRQIMGMTP 237 Query: 253 GRYIARLTTVSP 264 + R + +P Sbjct: 238 SEMMRRSESAAP 249 >UniRef50_D0J7V7 Transcriptional regulator, AraC family n=6 Tax=Proteobacteria RepID=D0J7V7_COMTE Length = 271 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 1/248 (0%) Query: 19 AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78 V P H H +G LI A G + + W+VPP AVW+ G+ H Sbjct: 24 PVTGVEQRYPPGHVVPQHSHARGHLIYASEGVLLVESPSGQWLVPPTTAVWLRPGMLHQI 83 Query: 79 QVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137 T LF++ + +P L ++PL REL+ L P L + Sbjct: 84 TATTAVRAYGLFVDEAWSAQLPARDGVLHVAPLVRELMTALVALPHEGPHRPRDALLGSL 143 Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197 L +EL +LP +R + E M P + + A A++ + L R +K Sbjct: 144 LLEELSALAPLPYYLPWPQDALMRRICESMLSAPAQRTTVEALARQHALTPKTLHRRFLK 203 Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 TG+++ +W QQ++L+ ++ L++G + VA GY+S +A+ F++ G+ P ++A Sbjct: 204 STGMNWGRWYQQMRLMASIPQLLQGMAITTVALESGYESHSAYSAAFRRQFGRPPSEFVA 263 Query: 258 RLTTVSPQ 265 + Sbjct: 264 SAGRATRP 271 >UniRef50_C3JLV5 AraC-family transcriptional regulator n=2 Tax=Rhodococcus erythropolis RepID=C3JLV5_RHOER Length = 268 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 6/228 (2%) Query: 31 LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLF 90 H+H + Q+ G + +W + ++ VW+PG V H + + + + Sbjct: 38 TAYGAHRHPEHQIAWMSEGTMQIAAGGNVWHLHSEHLVWLPGTVLHDMTLLSAGCMIAAY 97 Query: 91 IEPSAVTM---PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147 P T L++ L +L+ LA+RT + ++L+D L P+ Sbjct: 98 ARPDLRPGGPRWTQPLVLEVDALSAQLLRHLADRTID---DARRLMSQELLYDILAAAPE 154 Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207 + L V + ++ + P + LG+WAG +S + L R V +TG++F QWR Sbjct: 155 RHDVLAVPRNAAASSVSARILADPADSRTLGEWAGELGVSSKTLMRAFVADTGITFGQWR 214 Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 + ++ +L+ L +G+ V VA +GY +++ FI F++ G TP RY Sbjct: 215 TRARMYASLEMLARGEGVNDVAPQVGYRTSSGFIAAFRETFGTTPARY 262 >UniRef50_C3JVD6 Transcriptional regulator, AraC family n=3 Tax=Rhodococcus RepID=C3JVD6_RHOER Length = 277 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 63/258 (24%), Positives = 113/258 (43%), Gaps = 6/258 (2%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDE-LTSPVHQHRKGQLILALHGAITCTVENALW 60 + L ++ +E D E V + + D+ +T H HR +++ G + +W Sbjct: 20 IDELVVSEHELDDEPEDLVLWGGASSADQPVTWETHAHRSNEILFPRSGIVVVRSGAQMW 79 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLA 119 + P +WIP HS +V A A+ ++ ++ + +PL EL+L L+ Sbjct: 80 TLLPGRGLWIPALHRHSVRVAAGAQFLTVYCAVGQGPSLGDHPVAVHGTPLLYELLLHLS 139 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 R + A R V FD L ++ + + + + + P + + G Sbjct: 140 AREMSDDARRRAER---VFFD-LVVPGDERGAMKIPDSGPVGRIARDLLSHPEDPRSFGD 195 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 WA +S LAR +TG+SF QWR L++ +A+ L + V VA +GY + ++ Sbjct: 196 WANEIGVSTSTLARRFKVDTGVSFGQWRVLLRMNVAMSLLGQDVAVADVAEQVGYSTPSS 255 Query: 240 FITMFKKGLGQTPGRYIA 257 F+ FK+ G TP + Sbjct: 256 FVAAFKQSTGVTPMAFRK 273 >UniRef50_D1BBW6 DNA-binding domain-containing protein, AraC-type n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BBW6_SANKS Length = 257 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 99/250 (39%), Gaps = 4/250 (1%) Query: 9 GYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAV 68 + + + H + +L+ AIT +W+VPP + Sbjct: 3 EHRQVLPPWMLSTLVVDPAAEAREWVSAVHHEHELLWCAGRAITVEARGQVWLVPPTLGI 62 Query: 69 WIPGGVEHSNQVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRA 127 W+P G H +A + +++ S V + + ++PL EL+L Sbjct: 63 WLPAGTVHRVTAHPDASVFAAYLDTSREVPGWDSILGVPVTPLLHELLLH---NRRAAMP 119 Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187 + L + +++ + L + +R + E + P + +L WA MS Sbjct: 120 DASRHALQALAVEQMVPLTAATIELRLPRDLALRGVAEQVVADPGDGRSLDAWASSIGMS 179 Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247 R R + +TG +F QWR ++ AL L +G V VA +GY ST F+ +F++ Sbjct: 180 PRTFMRRFLDDTGSTFAQWRILARVAAALTMLAEGRAVATVARAVGYSSTGTFVALFRRT 239 Query: 248 LGQTPGRYIA 257 G TP Y Sbjct: 240 TGMTPAAYSR 249 >UniRef50_C0YJ90 AraC family transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YJ90_9FLAO Length = 270 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 9/258 (3%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 PD + F +H +++L P H+H KGQL G T++N ++VP ++ WIP Sbjct: 8 PDIDKDDKSVFVMHEKSEKL-IPFHKHTKGQLSYVEGGIAYITIDNKTYVVPARHFFWIP 66 Query: 72 GGVEHSNQV-TANAELCFLFI---EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQ-R 126 G+EH ++ L L+ + + + S L ++I Sbjct: 67 QGMEHILEIGHTATVLRSLYFYAHDDISDPFYSRLGIYPASELLIQMIKYTEIWDEKHVT 126 Query: 127 AEPMTRRLIQVLFDELPQQPQQQLH--LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184 A+ + L LP+ QQ L LP + H ++ +V + E L + F Sbjct: 127 AKDENFEFLVALKKILPKTHQQPLPIILPATHHKQMMKIVSYLEWNIGERLTLAHVSSKF 186 Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITM 243 +SER+L+RL + +SF Q+ + L+++ A++ L+ D + ++A +GY S +AF Sbjct: 187 GLSERSLSRLFKADMDISFLQYLKTLRIVKAIELLLNTDKPINEIADDVGYSSISAFSDT 246 Query: 244 FKKGLGQTPGRYIARLTT 261 F + P Sbjct: 247 FHEFTQSRPSDLRKSNKA 264 >UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZGK8_EUBR3 Length = 285 Score = 190 bits (483), Expect = 4e-47, Method: Composition-based stats. Identities = 58/285 (20%), Positives = 109/285 (38%), Gaps = 28/285 (9%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 M+ LN + V I+A ++ P+H H ++I+ L G T + + L Sbjct: 1 MIENLNGIHETVKYKEYSNVKLFINAEAED--YPIHWHTPMEIIMPLEGGYTVQIGDDLV 58 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT--------MPTTCCTLKISP--- 109 + ++I GV+H + L IE SAV+ + + ++P Sbjct: 59 HLNENDIIFIASGVKHRLIAPDTGKRLILQIEWSAVSKIKELNSILTLIAPAITLTPETS 118 Query: 110 -----LCRELILTLANRTTTQR---AEPMTRRLIQVLFDELPQQPQQQLHLPVSSH---- 157 R+L+L ++N T + ++++VL H V H Sbjct: 119 GDIHSNIRKLLLDISNEYQTDSFLSEAVIYSKILEVLVLIGRHHTASSCHFNVGRHKQQE 178 Query: 158 --PKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMA 215 + ++ E + E L + A S+ + RL + T +F ++ Q ++ +A Sbjct: 179 YLERFLSICEYIDTHCTEDITLDEIAKIAGFSKYHFTRLFKQFTNNTFYKYLNQKRIELA 238 Query: 216 LQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 L L +V + A G+ + + FI +FK G TP + Sbjct: 239 LTLLADPNISVTETAMQSGFANPSTFIRVFKTEKGCTPTEFRKMF 283 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats. Identities = 43/283 (15%), Positives = 91/283 (32%), Gaps = 27/283 (9%) Query: 2 MHRLNLNGYEPDRHHE-AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 M + E + + H H + ++I G ++ Sbjct: 1 MKYIEYREKREHGTREFPYACYRVTENFPRYNMIPHWHNECEIIYVRSGYFELFLDGHTH 60 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLC--------- 111 + I GG H N L + +A+ + CTL + P+ Sbjct: 61 RIDAGCCSLIIGGSMHGGTPKDNCRYDCLVFDMAALLKSSQICTLHLQPIINHERRFITF 120 Query: 112 -----------RELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSH--- 157 + +I + + + RL+ +L + +Q Q +S Sbjct: 121 FSADSEPAKDAKAVIDAMLEKEPGYE-FTVPGRLLCMLGHIVARQEHYQSGETAASDIKK 179 Query: 158 -PKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMAL 216 + + ++ + + + L + A M+ R + TG + ++ ++ A Sbjct: 180 VRRFKNVISYIEQNYRKNITLEELANECGMNRNYFCRAFKEYTGKTPVEYLNYFRIESAC 239 Query: 217 QGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 + + D + +A G++ + FI +FK G TP Y R Sbjct: 240 ELIASTDEKLIDIAMKCGFNDYSYFIKVFKSMKGVTPRDYCRR 282 >UniRef50_D1BHF8 DNA-binding domain-containing protein, AraC-type n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BHF8_SANKS Length = 309 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 9/245 (3%) Query: 30 ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89 E+T P H+H + +L+ G+ + + W +PP AVW+P GV ++ A + + Sbjct: 43 EVTWPAHEHAESELLWCASGSASLEADGRRWTIPPSLAVWVPAGVRNAAGAAAGSLVRAT 102 Query: 90 FIEPSAVTM---PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146 F + +A + P + ++ R L++ R + RRL +V+ D L P Sbjct: 103 FFDVAATRLVDVPDVVTGVAMTDAVRVLLMHNHLRDLD---DAARRRLHRVVLDLLVPVP 159 Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206 + L + +R + E + P + +WA + R LAR ETG++F +W Sbjct: 160 HESFDLLLPRTGHLRWVAESILADPGDRRTTEEWASRCGLHPRTLARQFHAETGVTFTRW 219 Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQS 266 R ++ A++ L G V V+ +GY S +AF+ F++ GQTP Y+ R +P Sbjct: 220 RILARMQWAIRELALGAPVLAVSRQVGYRSPSAFLAHFRELTGQTPTAYVGR---PAPVV 276 Query: 267 AKPDP 271 +P P Sbjct: 277 DEPGP 281 >UniRef50_A6ED21 Transcriptional regulator, AraC family protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6ED21_9SPHI Length = 271 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 103/253 (40%), Gaps = 10/253 (3%) Query: 10 YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69 + D H E + H+ ++ H H+KGQL G I + +P ++ VW Sbjct: 11 FNLDEHTE--TTYVWHSKFEDR-FKDHHHKKGQLTYVEGGVIFLYTREQSYFIPARHYVW 67 Query: 70 IPGGVEHSNQVT-ANAELCFLFIEPSAV---TMPTTCCTLKISPLCRELILTLANRTTTQ 125 +P GV H + + + ++ + ++ L E++ N Sbjct: 68 VPAGVTHHLEHRYRSTIVRNVYFNAKNEIDHSFFDHIGIYPVNDLLLEMLKFSENWNGNI 127 Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLH--LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183 ++ L LP + L +P + + ++R ++ + + E L + A Sbjct: 128 YPGSFEYGFLETLKSILPAISKHPLPIVVPTTDNERLRPVLWYIRQHLSEELTLEKIALE 187 Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQ-GLVKGDTVQKVAHTLGYDSTTAFIT 242 SER L+RL SF Q+ + +++ A++ L TV ++A+ +GYDS AF Sbjct: 188 TGFSERTLSRLFQASLKTSFFQYLKLVRMTRAMEKLLETDRTVTEIAYEVGYDSIAAFSN 247 Query: 243 MFKKGLGQTPGRY 255 F K GQ P + Sbjct: 248 TFYKMTGQRPSAF 260 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 41/282 (14%), Positives = 82/282 (29%), Gaps = 27/282 (9%) Query: 2 MHRLNLNGYEPDRH-HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 MH + + A + + + P H H + +LI + G T+ Sbjct: 1 MHYIKYKEIKHHGTADFPAGYYHVTESHPQYAMPYHWHEELELIHIISGTFHVTINETTR 60 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAV-----------TMPTTCCTLK--- 106 P + + G H + L S + + L Sbjct: 61 NAVPGDILLVNSGGLHGGTPY-DCVYECLVFPVSLLSSQTYASEFLNRLDRQDLILDEYF 119 Query: 107 ---ISPLCRELILTLANRTTTQRAEPMTRRL------IQVLFDELPQQPQQQLHLPVSSH 157 L+ L + L + +L + + L + Sbjct: 120 PAGDDTAIHSLLERLFALMQDSDEGGKLQCLGLLYQFMGLLLQDRRYTASDKSDLSTHRN 179 Query: 158 PKIRT-MVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMAL 216 + ++ + E L + A MS + + TG + + ++ A Sbjct: 180 IYLLKNVLNYIEAHYTEKITLHELARTAGMSSKYFCHFFSEMTGRTPIDYVNYYRVERAC 239 Query: 217 QGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 L G ++ +A G++ + F FKK G +PG+Y+ Sbjct: 240 CLLAGIGHSITDIAMLCGFNDVSYFTRAFKKYKGISPGQYLK 281 >UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VID9_9CLOT Length = 289 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 99/281 (35%), Gaps = 27/281 (9%) Query: 5 LNLNGYEPDRH-HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63 L +P + + I PVH H + ++I G +T + ++ Sbjct: 3 FELKENKPHGTKDDPFSTYHIENAGQSFQIPVHWHDEFEIIYVKSGFLTVNISGENYIGK 62 Query: 64 PQYAVWIPGGVEHSNQV-TANAELCFLFIE------------PSAVTMPTTCCTLKISPL 110 P A + G H T + + P L ISP Sbjct: 63 PGDAFVVSPGNLHFMGSKTGTVDYFTFLFPLKYISFYTDDILDDRLLEPLDSGRLMISPS 122 Query: 111 CRELILTLANRTTTQRAEPMTRRLIQ---------VLFDELPQQPQQQLHLPVSSHPKI- 160 ++ I L + + R + +L + + ++ + ++ + Sbjct: 123 VKDTIKELCEQLIEIYEAKKSERELNITTQIKTKIILLQFILEMWEKGFIVENNTSGRNI 182 Query: 161 --RTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQG 218 + MV + + +L ++ F +SE+ ++R + ++ Q+ L+L A Q Sbjct: 183 VEKEMVSYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYVAYLRLEYAKQL 242 Query: 219 LVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 L D +V + A GY + + FI FKK G +P +Y + Sbjct: 243 LQDTDISVTEAAMRSGYQNISYFIRSFKKTYGVSPLKYRKK 283 >UniRef50_A8LCQ9 Transcriptional regulator, AraC family n=1 Tax=Frankia sp. EAN1pec RepID=A8LCQ9_FRASN Length = 270 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 64/263 (24%), Positives = 110/263 (41%), Gaps = 11/263 (4%) Query: 9 GYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAV 68 + P R A + DEL S H+H ++ A+ G +++PP YA Sbjct: 2 PFLPMRRCVTVGAGTVEHRADELISYWHRHDLHEVEYAVSGLAEIRTPTTHYLMPPSYAA 61 Query: 69 WIPGGVEHSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRT----- 122 W+P GVEHS N +F +P+ P + + + P+ RE++ Sbjct: 62 WVPAGVEHSPL-LRNVTTIAVFFDPAVFDFPYSRAAVIPVPPVLREMMRYATRWPIGRGE 120 Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182 A+ R L V+ +L + L LP + P +R ++ E + Sbjct: 121 DDAEADTFFRALAAVVRGQLAH--EAPLSLPTADDPVVRDVMAYTTDHLAE-VTAARVCR 177 Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFI 241 +SER L R G S+R++ +Q++LI A+ L +V ++A +G+ S +A Sbjct: 178 AVGISERVLRRRFAAVLGQSWREYLRQVRLIRAMALLSTPTTSVGEIATEVGFGSASALA 237 Query: 242 TMFKKGLGQTPGRYIARLTTVSP 264 F+ G++P Y R T + Sbjct: 238 RAFRAWTGESPSAYRDRWLTTAA 260 >UniRef50_Q7NRR7 Probable transcriptional regulator n=1 Tax=Chromobacterium violaceum RepID=Q7NRR7_CHRVO Length = 250 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 61/226 (26%), Positives = 94/226 (41%), Gaps = 2/226 (0%) Query: 33 SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92 + H H GQLI GA+ C E W++ WIP GV HS + A + + Sbjct: 21 TASHVHAVGQLIYLRRGAMLCQSETMRWLMAAGQVGWIPAGVAHSAEPLAELYGVTAYAD 80 Query: 93 -PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151 + +P + L L+L R + +RL + DEL Q Sbjct: 81 SAAYPDLPAEVRVMPAGGLM-GLLLERQLRYEAEPWPGRRQRLAGAIVDELLQLVPLPQQ 139 Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211 LP+ + ++R + + L + A S +L R +ETG+SF W Q + Sbjct: 140 LPLPAERRLRALCRRVLADLGRGWLLDELAVAHGFSRASLTRAFARETGVSFGHWLAQAR 199 Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 L+ A++ L G V + A +GY S +AF F++ LG PG Sbjct: 200 LLEAVRLLSGGAMVGETALQVGYQSPSAFCAAFRRHLGMAPGELQR 245 >UniRef50_UPI000050FCF9 AraC family transcriptional regulator n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FCF9 Length = 272 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 59/232 (25%), Positives = 96/232 (41%), Gaps = 4/232 (1%) Query: 25 HAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANA 84 A E H H +L+ G T T++ W + P +WIP GV HS A Sbjct: 41 EAMEHETYWSEHSHPTHELLWREAGVGTVTIDQRTWTITPPLGMWIPAGVRHSGWTPAGV 100 Query: 85 ELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ 144 + + + I+PL L +R + L + + ++ Sbjct: 101 VVYAAQFSLDNPLVSDRPTAIAITPLL----RLLLDRLQHTDPGTSSYSLTEAMILDVMT 156 Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204 +L L + S+P I + + +GP + +L WA +S R + R ETGL F Sbjct: 157 PADNELLLHMPSNPLIAPIANAIIEGPADASSLQDWARKLGISGRTITRAFEAETGLGFG 216 Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 +W ++ A+ + G V + A +GY S +AF T FK+ G TPG++ Sbjct: 217 RWATTARVQHAVSMISLGGEVDEAAAGVGYRSVSAFTTAFKRITGTTPGQFR 268 >UniRef50_A5VF29 Transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria RepID=A5VF29_SPHWW Length = 274 Score = 186 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 68/252 (26%), Positives = 104/252 (41%), Gaps = 6/252 (2%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 + F ++ H H QLI A+ G I + A ++P A WIP G Sbjct: 20 RPSGQGFSFRDPERAISYDWHDHPYHQLIYAVAGTIQIETDAARHLLPTGRAAWIPAGQR 79 Query: 76 HSNQVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTT-QRAEPMTRR 133 H V + + L+ P A L SP+ RE+IL +P+ R Sbjct: 80 HRTLVH-DVDTASLYFAPDAVADGGGRVRILVASPVMREMILHALRWPQAVAERDPVARS 138 Query: 134 LIQVLFDELPQQ--PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191 L + + L LP + HP I +++ A P L AMSER+ Sbjct: 139 FFGTLALMCGEWLESELPLSLPGARHPGIVRAMDLAAVDPA-GIDLPAALAAAAMSERSF 197 Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251 R +ETG+ ++ W QL+++ A+ L G V VA +GY S +AF F + G+ Sbjct: 198 RRAFSRETGMGWQAWVAQLRILRAMGMLADGGRVTDVAAEVGYASLSAFAKAFAQLAGEG 257 Query: 252 PGRYIARLTTVS 263 P Y +R+ + Sbjct: 258 PADYRSRVRGRT 269 >UniRef50_Q2NTH9 Putative transcriptional regulator n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NTH9_SODGM Length = 268 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 97/214 (45%), Positives = 130/214 (60%) Query: 7 LNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQY 66 L YEPDR A A ++ + +P +QHRKGQLI+ALHG ITC + +AL MVPP Sbjct: 8 LTHYEPDRDRNLATAMRLNVVQSAMETPFYQHRKGQLIMALHGGITCELTDALLMVPPHC 67 Query: 67 AVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQR 126 AVWIP HSN T NA CF+F+EP + CTL ISPL ++LIL LA Sbjct: 68 AVWIPADTPHSNHATVNARFCFVFVEPIFPGLLARSCTLFISPLLQQLILHLAELPGDYA 127 Query: 127 AEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAM 186 + T RL V+ ++L P++ L LP SSHP+IR + + + P E L WA M Sbjct: 128 LDLPTGRLAVVMLEQLANMPEENLSLPFSSHPRIRRITDTLNHSPAERRTLPAWASLVGM 187 Query: 187 SERNLARLIVKETGLSFRQWRQQLQLIMALQGLV 220 +ER+LARL +KETG++F RQ+LQLI++++ L Sbjct: 188 NERSLARLFIKETGMTFGCRRQRLQLIISIRELA 221 >UniRef50_C7PA31 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PA31_CHIPD Length = 264 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 106/264 (40%), Gaps = 11/264 (4%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 MH L E D H ++ E +H H KGQL G C + + ++ Sbjct: 1 MHLLADYLNEIDVHPDSVYVMH---EKVERKFSMHSHIKGQLTYVEGGIAFCNMPDKSYV 57 Query: 62 VPPQYAVWIPGGVEHSNQVTAN--AELCFLFI---EPSAVTMPTTCCTLKISPLCRELIL 116 +P ++ +WIP EH Q+ + L+ + ++ L E+I Sbjct: 58 IPARHYIWIPKQQEHYMQIRHSKSTTTRNLYFYSQDDHLTPFYNKLGIYPVNDLLLEMIN 117 Query: 117 TLANRTTTQRAEPMTRRLIQVLFDELP--QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEW 174 A R + + D LP + LP + H ++R +++ +A+ + Sbjct: 118 YSARWERHVLPGDPGFRFLSSIKDILPDISTSALPVALPTTQHERLRPVLQYIAQSFDQQ 177 Query: 175 GALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQG-LVKGDTVQKVAHTLG 233 L + F +S R L+RL +SF Q+ Q L+++ ++ L T+ ++A+ G Sbjct: 178 LTLESVSSQFDLSPRTLSRLFTNILDMSFVQYLQTLRVVRGIEMILQTNQTLSEIAYQTG 237 Query: 234 YDSTTAFITMFKKGLGQTPGRYIA 257 Y S AF +F + + P + Sbjct: 238 YSSIAAFSKVFYQLTNKRPSSFQQ 261 >UniRef50_Q7UTW3 Transcription regulator n=1 Tax=Rhodopirellula baltica RepID=Q7UTW3_RHOBA Length = 275 Score = 186 bits (472), Expect = 9e-46, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 91/276 (32%), Gaps = 16/276 (5%) Query: 1 MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 M L + ++ + + + + T P H H + +L ++ G T + Sbjct: 1 MASGLTVKHFKVRGSADDGITVH-QWESVDHTWPNHSHPEYKLGVSEGGTGTFFNRGQRY 59 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTT-------------CCTLKI 107 P + I HS T L+ P+ V + Sbjct: 60 FTGPGKLLVIHPNEVHSCTATGAWRY--LYAAPNVVASIVRTFDRNGDIEPLLLPPVIDD 117 Query: 108 SPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMM 167 + L ++ + + + L + IR + E + Sbjct: 118 TQLVELVLQAHRAMDDGDPQLDQESAFYEAICELLVRHASMPDIPKKRGRANIRRVKESL 177 Query: 168 AKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQK 227 E +L + A S L+R+ KE G+ + + Q+++ A Q L+ G+T+ Sbjct: 178 EAKFRENVSLHELAQLAGTSAPYLSRVFSKEVGIPIQAYLSQIRVRRAQQMLMDGETLSN 237 Query: 228 VAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVS 263 VA+ G+ + F FK+ +G PG Y + Sbjct: 238 VAYAAGFADQSHFTRHFKRFIGVAPGAYSKAVNPSG 273 >UniRef50_A8U313 Helix-turn-helix, AraC type:Arac protein, arabinose-binding/dimerisation n=1 Tax=alpha proteobacterium BAL199 RepID=A8U313_9PROT Length = 282 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 1/268 (0%) Query: 6 NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65 + + A+ + + P H+H +GQL L L + + +W+VP Sbjct: 15 GRDPVSGHVEADVAIIGHAASFAPGASVPWHRHSRGQLALTLARVMRVETPDKVWLVPRG 74 Query: 66 YAVWIPGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTT 124 +W+P H + + L++ P + ++PT ++ +++ LA + Sbjct: 75 SVLWLPAETPHRSLAPEQRLMRSLYVRPDSAESLPTAPTAVEQGTPLADMVTWLAETYDS 134 Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184 R + + + P + LP + P + + + + P +L WA F Sbjct: 135 DRLDKAWSTVAGAALALVRPGPGVSIRLPQPADPALAVIADAVLADPAVEISLEDWAERF 194 Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244 M+ R L R + ETG+S+R WR+ L L +A + L+ G V VA GY T+AF+ F Sbjct: 195 GMAGRTLRRRVQAETGMSYRDWRRILGLTVAAERLLAGSRVTDVAFETGYAGTSAFVAAF 254 Query: 245 KKGLGQTPGRYIARLTTVSPQSAKPDPR 272 + TPG + R +A R Sbjct: 255 RAAFQVTPGEFQRRAALRGRPAAGASGR 282 >UniRef50_Q5WI14 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WI14_BACSK Length = 275 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 108/253 (42%), Gaps = 16/253 (6%) Query: 22 FCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT 81 F A T E P+H H +LI ++G++ E + + + ++I V HS Q Sbjct: 19 FIFQARTTERVIPMHFHSNMELIYCINGSLRVWHEGKVTTLMDKDMLFINSNVPHSTQSL 78 Query: 82 ANAELCFLFIEPSAVT-------MPTTCCTL--KISPLCRELILT---LANRTTTQRAEP 129 + L+ S + T+ L ++ R L++ L T T Sbjct: 79 TENRVLVLYFPKSFFASEQVLIQLNTSEEQLDEQVLSNLRTLLMEIYNLHYSTGTYDYIL 138 Query: 130 MTRRLIQV---LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAM 186 R+I++ L Q + S KI+T+++ + + E +L + A Sbjct: 139 AQSRIIELKYWLARHFSQTAELSPATSRSDRQKIQTILDFIKEHYTENISLAETARICGY 198 Query: 187 SERNLARLIVKETGLSFRQWRQQLQLIMALQGL-VKGDTVQKVAHTLGYDSTTAFITMFK 245 SE L+R+ + TG +F +++Q L L A+ L ++ ++++ G+ + +F +FK Sbjct: 199 SEAYLSRMFHEYTGQTFTEYKQILCLEKAIDLLDTTNKSLTEISYETGFPNVKSFRKVFK 258 Query: 246 KGLGQTPGRYIAR 258 + +G+TP Y Sbjct: 259 EVMGKTPYEYKKS 271 >UniRef50_Q28SV1 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1 RepID=Q28SV1_JANSC Length = 252 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 47/225 (20%), Positives = 96/225 (42%), Gaps = 4/225 (1%) Query: 39 RKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT- 97 + L+ A+ GA+ +V W++PP +A W+P S + C + P T Sbjct: 26 DRDYLLYAIRGALRVSVAGESWLLPPSFAAWLPANTPISVDIDKPVTTCSVLARPGLCTG 85 Query: 98 MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL--PVS 155 +P C ++SP+ R++I + L + + + P + Sbjct: 86 LPEKACVFQMSPMARQMIHYCKDWGPDAAHPAQAEGFFLALLHVCADLAVKSVDVKRPTA 145 Query: 156 SHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMA 215 + P +R +++ + + A +SER++ R + G+++ Q QL++I A Sbjct: 146 TDPVLRKAIDITEAHLAQAITANEIARKVNLSERSMQRHFQMDVGMTWSQTLTQLRMIHA 205 Query: 216 LQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 + L +G ++ ++A G+ S +AF F+ TP ++ L Sbjct: 206 VALLAEGKLSIIQIAGYTGFQSLSAFNRAFRTFAATTPTKFRKAL 250 >UniRef50_A5EPW3 Transcriptional regulator, AraC family n=3 Tax=Bradyrhizobium RepID=A5EPW3_BRASB Length = 268 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 104/253 (41%), Gaps = 11/253 (4%) Query: 17 EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76 E V H HR+ QLI A G + T W+VPP AVW+P H Sbjct: 19 EPGVHLIARLYHKGARLDPHMHRESQLIYASRGTMQVTTPQGRWLVPPDRAVWVPARHAH 78 Query: 77 SNQVTANAELCFLFIEPSAVTM------PTTCCTLKISPLCRELILTLANRTTTQRAEPM 130 + + A++++ L+ E + +++SPL + IL L + Sbjct: 79 AIDMLADSQMRTLYFELDWLRQAARGLRLDREFVVQVSPLLHQAILALFAPDGGAERAAL 138 Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190 RL EL + +P+ P+ R ++ P L A S R Sbjct: 139 LVRLAL---LELRRAEDSSTFIPLPQDPRARRAALLVLASPATEEDLATLASMVGSSART 195 Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGD--TVQKVAHTLGYDSTTAFITMFKKGL 248 L+RL ET LSF+ W Q+ ++ A++ L +V+++A LGY S AF F++ Sbjct: 196 LSRLFAAETRLSFKAWCQRARIAAAIERLSTDRHLSVKQLAADLGYASVPAFSHAFRQVT 255 Query: 249 GQTPGRYIARLTT 261 G+TP + + Sbjct: 256 GRTPTDFAEQSGA 268 >UniRef50_A3XQJ9 Probable transcription regulator protein n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XQJ9_9FLAO Length = 261 Score = 183 bits (465), Expect = 6e-45, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 110/251 (43%), Gaps = 9/251 (3%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 H + H+ +E P+H H+K Q+ G +N + P ++ +WIP G+E Sbjct: 10 HYPDSIYVHHSKIEEQ-LPMHSHKKHQISYVEGGVAFLNTKNNSFFFPARHFIWIPAGLE 68 Query: 76 HSNQVTANAEL-CFLFIEPSAVTMPT---TCCTLKISPLCRELILTLANRTTTQ-RAEPM 130 H+ + ++ LF + +S L E+I R + Sbjct: 69 HNVTSRTSVKMVHNLFFPADLIPETEILKKAGIFPVSNLLMEMINYTQRWNGDILRTDAE 128 Query: 131 TRRLIQVLFDELPQQPQQQLH--LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSE 188 + L + + + + LP +++ +R +++ + + L + A F S Sbjct: 129 AFEFLIALRNIILEVAKTPFPVVLPTTTNEMLRPILKYIHLNVDQPLYLEEVAAHFGYSA 188 Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKG 247 R+L+RL K SF Q+ + ++I +++ L+K D ++ +VA+ GY+S +AF F + Sbjct: 189 RSLSRLFQKNIETSFLQYVKLTRIIKSIELLLKTDLSISEVAYASGYNSLSAFSYAFNQI 248 Query: 248 LGQTPGRYIAR 258 + Q+P + + Sbjct: 249 VNQSPAAFKKQ 259 >UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=Dickeya dadantii Ech703 RepID=C6C3E5_DICDC Length = 296 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 55/290 (18%), Positives = 110/290 (37%), Gaps = 26/290 (8%) Query: 2 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61 M L D A + + + P+H H +L++ G + + Sbjct: 1 MQSRGLKLQTEDYFLTEKNAVTVAERSPQSAFPLHHHDFDELVIVWRGNGLHIWNDVPYR 60 Query: 62 VPPQYAVWIPGGVEHSNQVTANAEL-CFLFIEPSAVTMPTTCCTLKIS------------ 108 + ++ HS + EL L+I P +T+PT L Sbjct: 61 ITCGDLFYVTADDRHSYESVHALELDNILYIRP-RLTLPTDWQNLLPDGGVAQQQRYWRL 119 Query: 109 -----PLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP----VSSHPK 159 + R+ + +L +++P++ +L +VL ++ + H P ++ + Sbjct: 120 GEQGMAIIRDRVESLTQEC--MKSDPLSLQLSEVLLMQIALLALRYRHAPGETQLADAHQ 177 Query: 160 IRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGL 219 + ++ + + L + + S R+L ++TG+S Q+ +QL+L A++ L Sbjct: 178 LDLLMNALRDSIAQPFRLEAFCQQYGFSLRSLRSRFKQQTGMSVSQYLRQLRLCRAMELL 237 Query: 220 V-KGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSAK 268 T+ +VA G+D + F +F + G TP Y R T S Sbjct: 238 RYDRQTISEVAAQCGFDDSNYFSVVFHQAFGVTPSSYRQRFQTRSVAGTA 287 >UniRef50_Q091X7 Helix-turn-helix, AraC type n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q091X7_STIAU Length = 279 Score = 182 bits (464), Expect = 8e-45, Method: Composition-based stats. Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 6/254 (2%) Query: 13 DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72 + AA +FC+ LT+ H HR+ QL+ A GA+ V+ A W++PPQ A W+ G Sbjct: 7 NVDASAASSFCLTDEMPPLTTGWHAHRRHQLLYAARGALHLEVDRAQWLLPPQRAAWLRG 66 Query: 73 GVEHSNQVTANAELCFLFIEPSAVT--MPTTCCTLKISPLCRELILTLANRTTTQRAEP- 129 G H + LC +++EPS V C + PL RE+++ + + Sbjct: 67 GTLHRARANHLVTLCTVYLEPSLVPTAPQEECSVFLLPPLAREMLIYSVRWGPERAPDDT 126 Query: 130 MTRRLIQVLFDELPQQPQ--QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187 + Q L L + Q LP + P++ + + + A +S Sbjct: 127 VAESFFQTLAHLLAEWSSQGQTWRLPRARTPELEKAMAYTLAHLAGPLSFEEAARAAGLS 186 Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKK 246 R LAR +E ++R++ +++ A++ L + G V + A+ +G++S AF F Sbjct: 187 GRTLARRFDEEAQTTWRRFLHDARMLRAMELLAQDGARVTQTAYDVGFESLAAFTHAFHA 246 Query: 247 GLGQTPGRYIARLT 260 G+ P + R+ Sbjct: 247 FSGERPRDFRQRVA 260 >UniRef50_C2FVA1 AraC family transcriptional regulator n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FVA1_9SPHI Length = 263 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 8/238 (3%) Query: 31 LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV-TANAELCFL 89 L + H H+ QLI +G + E +P +Y WIP G+ + + +L L Sbjct: 23 LNTTFHHHQLNQLISPANGVLYLHTEGDTLYIPDKYYAWIPSGMIYKLISKSEQIKLTTL 82 Query: 90 FIEPS----AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 F++P T + L EL+ + + + L LP Sbjct: 83 FLKPEKNEIQSDFFNTLGVYAPNTLIEELLQFGFRHWQETKHAGLKESCMAALKRILPVV 142 Query: 146 PQQQLHL--PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203 L L P + ++ + K Q A F +SER L+R KETG + Sbjct: 143 LSTPLKLFVPAPESEVLMEIITYIQKHLNSPSDFQQLAQRFNLSERTLSRWFKKETGSTI 202 Query: 204 RQWRQQLQLIMALQGLVKGDT-VQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260 Q+ + +++ AL+ + + + ++ H +GY+S +AF T+FK+ +G++P Y R Sbjct: 203 FQFVKSVRVQKALELIESSNMEIVEITHAVGYNSLSAFSTVFKEFMGESPQEYKKRFH 260 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 97/240 (40%), Gaps = 23/240 (9%) Query: 36 HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI---E 92 H H +++ GA +E + + P V + G H + A A L +F+ + Sbjct: 38 HSHDFCEILYVAGGAGEAILEGKKFRLAPGDLVVVNPGTLHEERSDAKAPLRLIFLAIRD 97 Query: 93 PSAVTMPTTC------CTLK-------ISPLCRELILTLANRTTTQR--AEPMTRRLIQV 137 + +P C L + REL+ +++ + ++ + L+ + Sbjct: 98 FAVPGLPAGCLSQEKYRVLSCGEYRYKMDIYLRELLQETSSQIEFYQEISQGLVSALLVL 157 Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197 + + P+ + L + + E + + L + +S+ L+ L + Sbjct: 158 VMRLIRINPEDEAALSQEC----QKIKEYLDQNFTSPITLDSLSETVYISKHYLSHLFKE 213 Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 +TG+S ++ ++ A + L + + V +V+ +GY++ F +FK+ G +P +Y Sbjct: 214 QTGVSPIKYLTSKRMEKACELLSETELPVSEVSKAVGYENPLYFSQVFKRIYGISPVKYR 273 >UniRef50_B5CUH6 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CUH6_9BACE Length = 268 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 98/243 (40%), Gaps = 12/243 (4%) Query: 26 AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV-TANA 84 G +E+ P H H K Q+I L G + + + + VP ++ WIPG EH Sbjct: 25 TGWEEIKLPGHAHEKCQIIYTLSGTLHVQIGSTSYFVPEKHIAWIPGSTEHELSSKNRQV 84 Query: 85 ELCFLFIEPSAVTMPT---TCCTLKISPLCRELILTLA------NRTTTQRAEPMTRRLI 135 L ++ A T + E + +A + + Sbjct: 85 SLVIFYLSMDADDKDTALKEFSIYHTNSFIAENLKFIASKGTEIEQADSPDLYTFALSFF 144 Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 ++L L + + ++ ++ + + E + Q A F S RNL+RL Sbjct: 145 KLLPSISQDMGFLLKMLAIPNDARLHPILAYLQEHLHENLKMPQLAAHFGFSVRNLSRLF 204 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254 E+G+ F + L+++ A++ G T+Q++A+ +G+ + F +F++ G +P Sbjct: 205 -NESGIRFSYYVNNLRIMRAIELFADGGRTMQQIAYEVGFATPNHFNRVFRQITGVSPNA 263 Query: 255 YIA 257 ++ Sbjct: 264 FVK 266 >UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0D2_RUMGN Length = 270 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 88/252 (34%), Gaps = 20/252 (7%) Query: 20 VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79 +A+ G ++ + H H +L L G +E ++ + V P + H + Sbjct: 15 IAYAYAEGVNDNMTQSHFHDFFELYYLLEGERMHMIEGEIYHLTANDFVLFPPHIMHHSY 74 Query: 80 VTANAEL--CFLFIEPSAVTMPTTCCTLKISPLC-----------RELILTLANR---TT 123 + L+ P + T C L L L+L+L + Sbjct: 75 GEKDMPFKRIVLYFSPDLIANDTICQLLSEKELLFVNEGYIPNQILSLLLSLTHEIDVPG 134 Query: 124 TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183 + +L +L + L + +P + V+ + +E ++ Q A Sbjct: 135 KYHDAYICNQLNGLLLNMLRLDFEAVKSIPKTRSA---KAVDYIHNHYMEDISVNQLAEI 191 Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQG-LVKGDTVQKVAHTLGYDSTTAFIT 242 +S +L TG + Q+ +++ A + L + +++ +G+ + T F Sbjct: 192 LYVSPYHLCHEFKNATGKTIIQYLNTTRILHAQRLMLETDYNITQISREVGFSNLTHFNR 251 Query: 243 MFKKGLGQTPGR 254 FKK G P Sbjct: 252 TFKKITGVAPRE 263 >UniRef50_B0MGZ5 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MGZ5_9FIRM Length = 274 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 82/240 (34%), Gaps = 15/240 (6%) Query: 33 SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92 P H H + G T +++ P ++ H+ + + L FI Sbjct: 27 FPNHFHDHYVIGCIESGMRKVTCRGEEFLIEPGDLLFFNYRENHACEQVGDYPLNCRFIN 86 Query: 93 PSAVTMPTTCCTLK--------ISPLCR-----ELILTLANRTTTQRAEPMTRRLIQVLF 139 M + + P+ R EL+ + E L +L Sbjct: 87 IKRERMKEIAEEITGRNEYPEFVKPMIRKCSKAELLREVYRMVAEGSQEFEKEELFYLLM 146 Query: 140 DELPQQPQ--QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197 ++L + +Q + V ++ + M + E +L Q +S +L R K Sbjct: 147 EQLLSEYAVFEQKKVQVPDTERLNAVCSYMKEHYSENVSLEQLCKIAGVSRYSLIRYFTK 206 Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257 ++ Q+ + +++ A L +G + A G+ + F FK+ G TP +Y Sbjct: 207 YKKITPYQYLESIRVNRAKLYLEQGTEPAEAAAMTGFSDQSHFTNFFKRLFGLTPAQYQR 266 >UniRef50_D1BFL9 DNA-binding domain-containing protein, AraC-type n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BFL9_SANKS Length = 280 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 112/251 (44%), Gaps = 8/251 (3%) Query: 21 AFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV 80 G + H H L G + +++A+W + P +W+P G H+++ Sbjct: 29 VVVADQGVSRPLAAPHSHPDAMLAWCYRGTVWVYLQDAVWRLAPGQGIWVPAGTPHTSRH 88 Query: 81 TANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLF 139 + C+ ++ +A+ P T + ++ +E++L L + + R+ V+ Sbjct: 89 EPGSTGCYTYLPDAALVAPVATITRVLVARAVQEMLLHLGA---DDMDDGLRVRIQAVIL 145 Query: 140 DELPQ----QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195 + L Q +P+ + ++R +V+ + P + + + ER + R++ Sbjct: 146 EMLQQPSLQASDGWGEVPLPADERLRPLVQAVLADPGDPRTARELFDAHGLHERTVLRVL 205 Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255 ++ G++F +WR +++ A + LV G V VAH GY +T+AF FK+ G TP + Sbjct: 206 QRDVGMTFARWRAGVRMTQAARMLVDGTPVGLVAHRTGYGTTSAFSAAFKQRFGMTPREH 265 Query: 256 IARLTTVSPQS 266 +AR+ Sbjct: 266 VARVRANPAHH 276 >UniRef50_UPI000197B237 hypothetical protein BACCOPRO_02201 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197B237 Length = 274 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 111/252 (44%), Gaps = 12/252 (4%) Query: 20 VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79 V G E+ P H H K Q+I L G + + + + VP ++ WIP G EH Sbjct: 19 VILIKKTGWKEVNLPGHVHGKCQIIYTLAGTLHVEIGSESYFVPEKHIAWIPQGAEHKLS 78 Query: 80 V-TANAELCFLF--IEPSAVTMPT-TCCTLKISPLCRELILTLANRT--TTQRAEPMTRR 133 + + + + P P + L E + +A++ ++ +P Sbjct: 79 SNSRQVSMVIFYVSLRPEGKDDPKGEFAIYTANRLIGENLKFIASKGKMIEKQEQPDLYH 138 Query: 134 LIQVLFDELPQQPQQQL----HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189 F+ LPQ + L + ++ ++ + E + + A + +S R Sbjct: 139 FALGFFNLLPQMSPGKELLLKSLVIPDDSRLYPILRYLTDHVQEELRMDEVALRYNLSTR 198 Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGL 248 NL+RL +E+ + F + +L+++ A++ + G T+Q++A+ +G++++ F +F++ Sbjct: 199 NLSRLF-QESNIHFSSYVNRLRIMRAIELMTDGGRTMQEIAYAVGFNNSNHFNRVFRQVT 257 Query: 249 GQTPGRYIARLT 260 GQ+P Y+ Sbjct: 258 GQSPKNYLRSCQ 269 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 93/277 (33%), Gaps = 31/277 (11%) Query: 18 AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77 + I +D +H H + +L+L G V+ + + A+++ G HS Sbjct: 18 PVSLYEITCPSDAPLLDLHWHDELELLLVTEGTAVFRVDLQDYELQAGEAIFVNSGELHS 77 Query: 78 NQVTAN-------AELCF-------------LFIEPSAVTMPTTCCTLKISP-----LCR 112 V +I P L+ P L Sbjct: 78 GYVVGGKPCSFDAVVFHSSLFSSGSIDYLFDRYISPVLEKRYEVPAHLRREPGPGMELLA 137 Query: 113 EL--ILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSH---PKIRTMVEMM 167 L I + + L +L + P +++T++E + Sbjct: 138 MLDQIFEVHRNEQAASELTIKGLLFSILAKLVSLGKPSVRVKPEQEGYRIERLKTVIEYI 197 Query: 168 AKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDT-VQ 226 + E L + A MSE R + T S ++ ++ A L + D + Sbjct: 198 EQNYAEPIPLQKLAELARMSESYFCRFFKRITTKSPIEYMNSYRVQQAASRLRQTDAKIM 257 Query: 227 KVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVS 263 +VA +G++S + F T+F++ G TP Y +RL S Sbjct: 258 EVALDVGFNSLSYFNTVFRQRFGCTPREYRSRLQVNS 294 >UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G755_9FIRM Length = 302 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 98/280 (35%), Gaps = 29/280 (10%) Query: 5 LNLNGYEPDRH-HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63 L +P + I PVH H + ++I G +T ++ ++ Sbjct: 16 FELKENKPHGTKDNPFSIYHIENAGRSFQIPVHWHDEFEIIYVKSGLLTVSISGESYIGK 75 Query: 64 PQYAVWIPGGVEH-SNQVTANAELCFLFIEPSAVTM------------PTTCCTLKISP- 109 A + G H T + ++ P L I+P Sbjct: 76 AGDAFVVSPGNLHLMGSQTGTVDYFTFLFPLKYISFRTDDMLDDKLLEPLNSGHLMINPR 135 Query: 110 -------LCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRT 162 LC +LI ++ + +++ + + ++ + + R Sbjct: 136 VKDSAKELCEQLIDIYMAENDETESKITAQIKTKIILLQFILEMWKKGFVIE-NDTSGRN 194 Query: 163 MVE-----MMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQ 217 +VE + + +L ++ F +SE+ ++R + ++ Q+ L+L A Q Sbjct: 195 IVEKEMVSYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYITYLRLENAKQ 254 Query: 218 GLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 L D +V + A GY + + FI FKK G +P +Y Sbjct: 255 LLQDTDLSVTETAMQSGYQNVSYFIRSFKKAYGISPLKYR 294 >UniRef50_D1VIF5 Transcriptional regulator, AraC family n=1 Tax=Frankia sp. EuI1c RepID=D1VIF5_9ACTO Length = 250 Score = 179 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 4/244 (1%) Query: 13 DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72 DR A + + P+ QL+ GA+T + W +PP A+WIP Sbjct: 7 DRAEPAVRGYAVTHPPGVAALPIQA-GWDQLLYTASGAMTISTPAGSWFIPPHRALWIPD 65 Query: 73 GVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKIS-PLCRELILTLANRTTTQRAEPMT 131 G + + + + A + L+ P + + REL+L R +P+ Sbjct: 66 GAQATVRNRSPAAVRNLYFATPLGVAPPRAQAVAVPERFGRELLLHAVRRCPLDLGDPVH 125 Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191 L+ VL D+L P+ + LP S P+ + + P A S R L Sbjct: 126 AALLTVLVDQLRGLPEASVWLPWPSDPRASDLATALVADPAAGLT--SLAHRVGASRRTL 183 Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251 R ETGLS WR++ +++ +L L G +V + A GY + +A++ FK+ LGQT Sbjct: 184 ERAFGAETGLSLGAWRRRARILSSLDTLAAGASVTQAAIEAGYATPSAYVAAFKQELGQT 243 Query: 252 PGRY 255 P + Sbjct: 244 PRHF 247 >UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus RepID=C6JCU7_9FIRM Length = 282 Score = 179 bits (456), Expect = 7e-44, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 96/286 (33%), Gaps = 33/286 (11%) Query: 2 MHRLNLNGYEPDR-HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 MH L+ N P + I H H + ++I L G++T T++ + Sbjct: 1 MHDLDHNEDRPRGTYEFPFEFHHIDHTHPRYVMSYHWHVEYEIIRILEGSLTVTLDEKSF 60 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120 +++ G+ HS + + + + + C I + + Sbjct: 61 TAVKNDVIFVHSGILHSG-IPHDCVYQCIVFDMNTFLKNNPVCGEYIQKILHQ---ETML 116 Query: 121 RTTTQRAEPMTRRLIQVLFDEL-------------------PQQPQQQLHLPVSSHPK-- 159 P I VLFD + + + + Sbjct: 117 FPHFSDEHPQILNCISVLFDAMYEKDTGYELTVFGQFYHFFGLIFSNHYFIENPTRTRRD 176 Query: 160 ------IRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 ++ ++E + K L + + +MS + R + T + + + ++ Sbjct: 177 YKRILQLKQVLEFIEKNYANPITLQELSASVSMSPKYFCRFFSEMTHQTPVDYLNRQRIE 236 Query: 214 MALQGLVKG-DTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258 A L D++ ++A+ G++ + FI FKK G TPG+Y R Sbjct: 237 EACLQLAATDDSITEIAYRNGFNDLSYFIRTFKKYKGMTPGKYKRR 282 >UniRef50_C5PU57 AraC family transcriptional regulator n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=C5PU57_9SPHI Length = 271 Score = 179 bits (456), Expect = 7e-44, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 8/238 (3%) Query: 31 LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV-TANAELCFL 89 L + H H+ QLI +G + E +P +Y WIP G + + +L L Sbjct: 28 LNTSFHHHQLDQLISPENGVLYLHTEGDTLYIPDKYYAWIPSGTIYKLISKSEQIKLRTL 87 Query: 90 FIEPS----AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145 F+EP + + L EL+ + +R + I + LP Sbjct: 88 FLEPEKNEFHADFFNSLAVYAPNTLIEELLQFGFSHWKKERDPELKEYCIAAIRHILPVA 147 Query: 146 PQQQLHL--PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203 L L P + ++ + + + A F +SER L+R KETG + Sbjct: 148 LSTPLKLFVPAPASEVLQESITYIQNHIKGPLDIQHLAQKFHLSERTLSRWFKKETGSTL 207 Query: 204 RQWRQQLQLIMALQGLVKGDT-VQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260 Q+ + +++ AL+ + + ++ H +GY+S +AF T+FK+ +G++P Y R Sbjct: 208 FQFVKSVRVQKALELIENSRMDIIEIMHAVGYNSLSAFSTVFKELIGESPQEYKKRFQ 265 >UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium RepID=C4ZAF9_EUBR3 Length = 292 Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 97/284 (34%), Gaps = 32/284 (11%) Query: 5 LNLNGYEPDRHH-EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63 L P + I PVH H + ++I G + T+ ++ Sbjct: 3 FELKENRPHGTPENPFSQYHISDVKRAFQIPVHWHDELEIIYVKQGKLHVTISGENYIGS 62 Query: 64 PQYAVWIPGGVEH-SNQVTANAELCFLFIEPSAVTM------------PTTCCTLKISPL 110 P+ A + G H T +A+ ++ P L ISP Sbjct: 63 PKDAFVVSPGSLHLMGSPTGDADYYTFLFPLEYISFQTDDLMEKSILSPLKRGRLMISPQ 122 Query: 111 CRELILTLANRTTT------------QRAEPMTRRLIQ--VLFDELPQQPQQQLHL---P 153 + + R A + + L + + + L L Sbjct: 123 INDTAADICERLIEINEQISGKNAEKTDAANIEAQFETKITLIKFIRKMWRNGLILENGT 182 Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213 ++ + M+ + + +L ++ F +SE+ ++R + ++ Q+ L+L Sbjct: 183 NGTNTTEKEMITYIRQNYTREISLKEFGAQFHLSEKYISRYFKEHFHITLSQYVNHLRLE 242 Query: 214 MALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256 A Q L + +V +VA GY + + FI FKK G +P +Y Sbjct: 243 HARQLLEESTASVTEVAMCSGYQNVSYFIRSFKKMYGVSPLKYR 286 >UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C5RE92_CLOCL Length = 286 Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats. Identities = 35/286 (12%), Positives = 90/286 (31%), Gaps = 27/286 (9%) Query: 2 MHRLNLNGYEPDR-HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60 M L+ + + P H H + ++I + G T+ Sbjct: 1 MKYLDYKENRQHGTFDFPIAFYHVSPSHPRYNMPYHWHTEYEIIRIISGEFLLTLNGNEL 60 Query: 61 MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRE------- 113 + +I G+ H + + + ++ + C+ +I + Sbjct: 61 KLKTGDLAFIHAGILHGGTPI-DCVYECIVFDMKSLLKVNSTCSKQIQDIIHNSKVINSL 119 Query: 114 --------------LILTLANRTTTQRA--EPMTRRLIQVLF-DELPQQPQQQLHLPVSS 156 L ++A + + L+ ++ L P++ Sbjct: 120 LPTDNLELQTVCNYLFESMAQKKLGYELVTQGSLYHLLGIILEHRLYSTPKEATSKNQQR 179 Query: 157 HPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMAL 216 + + ++ ++ + + L + M+ + R T S + ++ + Sbjct: 180 INQFKNVLSLIEQQYPDPLTLEDLSKAAGMTPKYFCRFFRGMTQRSPIDYLNYYRIESSC 239 Query: 217 QGL-VKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTT 261 + L +++ ++A G++ + FI FKK G TP +Y+ Sbjct: 240 EQLVSTNESITEIALNCGFNDISYFIKTFKKYKGVTPKQYLKDYHA 285 >UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L6_PAESJ Length = 305 Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 107/282 (37%), Gaps = 42/282 (14%) Query: 30 ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV--TANAELC 87 P+H+H +L+ G+ E + + I G++H+ V + E+ Sbjct: 28 GTMIPLHRHEFVELVFIKQGSGLHEYEGNTFPITAGDVFIIEPGMDHAYTVEQSEGMEVV 87 Query: 88 FL------------------------FIEPSAVTMPTTCCTLKISP--------LCRELI 115 + ++EP + + L +SP + +L+ Sbjct: 88 NVLFVPALLERELAVLSGVTSFIDFYYMEPFLRSDVSFQAKLTLSPRQMMDIRGILEQLM 147 Query: 116 LTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH-LPVSSH--PKIRTMVEMMAKGPV 172 N+ + + + +LI++ + H LP + I + E + + Sbjct: 148 KEYGNKESGYQ-FLIKSKLIELFIILSRIYANNRNHSLPSIQNDGEMIARICEFIKRHQA 206 Query: 173 EWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGL-VKGDTVQKVAHT 231 +L Q + MS+ L + TG+SF ++R ++ +A Q L D + ++A Sbjct: 207 HPLSLEQISQMAGMSQSKFTLLFRQMTGMSFVEFRNDQRIQLAKQLLAASSDKIARIALD 266 Query: 232 LGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ 273 GY+ + F +FKK G+TP Y R+ S +PR+ Sbjct: 267 TGYEDLSHFNHVFKKLTGETPSLYRKRMKGRSE---SGEPRE 305 >UniRef50_A9GKK5 Transcriptional regulator, AraC family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GKK5_SORC5 Length = 304 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 102/256 (39%), Gaps = 7/256 (2%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 H A AF H H + QL+ L G VE+A +++PPQ A IP G Sbjct: 48 HAGARAFSYEDELRGAVYGWHTHARHQLLCPLAGTARLEVEDASFLLPPQLAALIPAGER 107 Query: 76 HSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTR-R 133 H+ +A + ++ EP+A P +I L RE+++ +R + Sbjct: 108 HATTC-GDASIVSIYFEPAAFPSPLAAVRIFEIPALLREMVIYARRWPVARRPDDAAANT 166 Query: 134 LIQVLFDELPQQPQ--QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191 + D + LP ++ +E + L + A F +ER L Sbjct: 167 FFAAMADIIGPLLDRGATYRLPRGKTRPVQRAIECALRDVASA-DLPRAAAFAGATERTL 225 Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250 R +ETG+++R + + +++ A+ L +V +VA +G+ S AF F+ GQ Sbjct: 226 RRRFREETGVTWRGFVTRARVLRAIDLLSGPSASVTQVALDVGFQSLGAFAAAFRAVTGQ 285 Query: 251 TPGRYIARLTTVSPQS 266 TP + Sbjct: 286 TPSEFRRTARPSPGGG 301 >UniRef50_D0LZ72 Transcriptional regulator, AraC family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ72_HALO1 Length = 284 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 108/263 (41%), Gaps = 22/263 (8%) Query: 18 AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77 F + +P H+HR+ Q++ AL G++ V A W++PPQ A +IP G EH Sbjct: 22 PPACFGLADEMGPRHTPWHRHRRHQILYALTGSLKLEVTEAQWLLPPQRAAFIPAGCEHR 81 Query: 78 NQVTANAELCFLFIEPSAVTMP-------------TTCCTLKISPLCRELILTLANRTTT 124 + +A L ++++ + C ++ L RE++L Sbjct: 82 VRCQRSAALRTVYLDTATFAAGEDAAAPAPVPVIAAGTCVFSVTSLAREMLLYAMRWGPL 141 Query: 125 QRAEPMTRRLIQ-------VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGAL 177 + A+ ++ L + L LP P + E Sbjct: 142 RSADDRASEILADAFFSALALLSREWIRADAGLRLPRPRSPDLSRACEHALADLAAASMA 201 Query: 178 GQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDS 236 A+S R LAR ET +S+R + + +++ A++ L + G V +VA ++G+D+ Sbjct: 202 RAA-HAAAVSPRTLARRFRDETQMSWRSFLRTARVLRAMELLAEPGARVTEVALSVGFDN 260 Query: 237 TTAFITMFKKGLGQTPGRYIARL 259 AF T F+ G++P Y R Sbjct: 261 PGAFSTSFRALTGESPSSYQRRF 283 >UniRef50_Q2S7S2 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7S2_HAHCH Length = 250 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 60/231 (25%), Positives = 95/231 (41%), Gaps = 1/231 (0%) Query: 30 ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89 + + +H +GQL GAI C + W+ P+ WIP G +H + + L Sbjct: 17 DQSRDLHARSEGQLYWLEQGAIFCRSDRFHWLTAPRQLTWIPPGCQHDARPLSTVRGVLL 76 Query: 90 FIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQ 148 + +P L+ L +L L L+QV E + Sbjct: 77 HLREDLTFVLPKEPVALEPHRLLEATLLRLIELCPESDWLERHEHLLQVFLWEAREATPL 136 Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208 + LP+ P++ M + + P L A + S R L R ++ETG S QW Q Sbjct: 137 RQRLPMPHDPRLLRMANSLWRAPESNPGLDALALEYGFSRRTLTRKFMQETGASLSQWTQ 196 Query: 209 QLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 +L+ AL+ L ++V A +GY S + F +FK+ G +PG Y R Sbjct: 197 HAKLLRALELLAANESVSSAAFGVGYQSVSTFCAVFKQVFGMSPGDYKRRF 247 >UniRef50_C5PVX4 AraC family transcriptional regulator n=2 Tax=Sphingobacterium spiritivorum RepID=C5PVX4_9SPHI Length = 258 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 5/219 (2%) Query: 31 LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT-ANAELCFL 89 VH HR Q + G + ++P +A WIP + H ++ +L + Sbjct: 27 HAHAVHGHRLAQFVYVEKGFQYLEAGGKIHLLPQNHAAWIPPNMLHKTSTDASHVQLRTI 86 Query: 90 FIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ--P 146 F + +++P+ +E+IL ++ + ELP Sbjct: 87 FYRMEDIPEFYNELRIFQVAPVLKEMILYAEKWNRIADYSIEEDTFLKAIVLELPNFWKH 146 Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206 LH+P + + + + + + A +S R+L R+ ETG++ ++ Sbjct: 147 SLSLHIPAPMDEHLIKVCAYIHSHLADNRPVAEIAEQHYLSLRSLQRIFKSETGITLAKY 206 Query: 207 RQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMF 244 Q +++I +++ L G TV +VAH +GY S AF F Sbjct: 207 MQMVRIIKSVELLGTGRYTVSQVAHLVGYKSVQAFSDSF 245 >UniRef50_Q84HW2 Transcription regulator n=1 Tax=Rhizobium sp. TAL1145 RepID=Q84HW2_9RHIZ Length = 200 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 62/198 (31%), Positives = 106/198 (53%), Gaps = 2/198 (1%) Query: 62 VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS--AVTMPTTCCTLKISPLCRELILTLA 119 VPP A+WI +H V AE+ L+++P+ ++C ++++PL RELI + A Sbjct: 3 VPPTRALWIRANTDHKLSVARAAEIRVLYVDPAIGCAPTSSSCVVVEVTPLVRELISSCA 62 Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179 + RL +VL D++ + + LP+ + P+ +V+M+ + P L Sbjct: 63 GLPWDYQPGSKEARLCEVLLDQIATLDRSPVDLPIPTDPRGLRIVDMLKREPSSREPLAA 122 Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239 A S R + R+ V+ET L+F WRQ+L+L+ AL+ L G+ V VA +GY+S ++ Sbjct: 123 LAARVGASSRTIERIFVRETHLAFGAWRQRLRLLAALELLAYGEAVTNVALDVGYESASS 182 Query: 240 FITMFKKGLGQTPGRYIA 257 F+ F++ G TP R+ Sbjct: 183 FVAAFRETFGTTPARFFK 200 >UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FM47_DESAA Length = 277 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 87/255 (34%), Gaps = 18/255 (7%) Query: 23 CIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV-T 81 +H H H + + L G + A ++ P+ I G H+ + Sbjct: 22 AVHGLHVTNEFSRHVHDGFSIGIVLEGKRVIDQKGASVVIGPKDVFLINPGEPHACKSED 81 Query: 82 ANAELCFLFIEPSAVTMPTT----------------CCTLKISPLCRELILTLANRTTTQ 125 + +EP A+ + +++ L RE + + +T Sbjct: 82 GKHTYFTICVEPEALKSFASQISEKAQETPYFSCLAAKDEELNSLIREFMTLVQKSGSTM 141 Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185 E ++ P + + + E + E L + AG Sbjct: 142 EKEASLISILSTAILRYGDNPPEIRRI-SPHVQAVNRAREYIKTHYAENLTLKELAGVAC 200 Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245 +S RL ++ G+S + Q ++ A + L +G ++ A +G+ + F FK Sbjct: 201 LSPFYFQRLFLENVGISPHDFLIQYRIKKAREMLDQGSSLADAALDVGFTDQSHFTRAFK 260 Query: 246 KGLGQTPGRYIARLT 260 + G +PGRYI L Sbjct: 261 RVTGISPGRYIRNLQ 275 >UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA91_9FIRM Length = 288 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 87/274 (31%), Gaps = 34/274 (12%) Query: 18 AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77 + H + H H + + I A HG + TV + + P +I G H Sbjct: 17 PLQVYSHHDKDGFFSVSQHWHEELEWICAEHGVLNLTVRGRSFTLHPGEFCFINSGELHE 76 Query: 78 NQVTANAELCFLFIEPSAVTM---------------------PTTCCTLKISPLCRELIL 116 + + + P + PT SP ++IL Sbjct: 77 IKSGGPSLHHAIVFNPDILDFTLYDICQHSFIRPVTSGNLIFPTLPSVF--SPEESQMIL 134 Query: 117 -TLANRTTTQRAEPMTRRLIQ--VLFDELPQQPQQQLHLPVSSHPK-------IRTMVEM 166 + P L + L Q L + K ++ ++E Sbjct: 135 FHMQEIIRLYHTLPSCASLSIKIHILQILELFFQADCFLENTISSKEKDSQNKLKKVIEY 194 Query: 167 MAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TV 225 + + +L A MS +E G + + ++ A Q L + V Sbjct: 195 IHENYAGPISLPDLAKICFMSPNYFCHYFKQEIGKPPIAFINEYRIQKACQILTDSELPV 254 Query: 226 QKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259 +VA ++G+D+ + FI F++ TP Y + L Sbjct: 255 SQVAISVGFDNFSYFIRKFREYKNVTPTEYRSHL 288 >UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN9_9BACL Length = 301 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 90/281 (32%), Gaps = 35/281 (12%) Query: 16 HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75 + + G E H H + + L G V+ + V AV+I GG Sbjct: 19 RQPFGTYWYRYGPGEHVIDCHWHDEAEFFYCLEGETLFQVDTDYFPVGAGEAVFIDGGDI 78 Query: 76 HSNQVTAN--AELCFLFIEPSAVT---------------------MPTTCCTLKISPL-C 111 H+ + L + + P + L Sbjct: 79 HAAHAHGDQGCAFFSLVFDTQLLASAHYDAVQENLVLPLQERKATFPRHIRRETAADLSL 138 Query: 112 RELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSH---------PKIRT 162 E I+ L R+ + + + LF L + + S +++T Sbjct: 139 LEHIVALM-RSCSTESPGYEGAVKGHLFLMLAEIAATGRAVNRSHSSSRSESSKIDRLKT 197 Query: 163 MVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKG 222 +++ + L + A MSE R T + + ++ A + L + Sbjct: 198 VIQHIQHNYSHPIRLAELAALIPMSEGQFCRFFKSMTRQTPMDYINSYRIRQAAELLREP 257 Query: 223 DT-VQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262 + + +A +G+D+ + FI +F+K + +P + RL Sbjct: 258 ERKISDIALEVGFDNISYFIRVFRKAMNCSPSEFRKRLQAS 298 >UniRef50_C7PGY2 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PGY2_CHIPD Length = 278 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 100/251 (39%), Gaps = 8/251 (3%) Query: 12 PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71 P+ +A F IH ++ P+HQH K QL G + + L ++P ++ WIP Sbjct: 22 PEIEQQATSIFVIHEKCEKQ-IPLHQHSKSQLFYVDGGIAYIRLADQLLVIPSRHYCWIP 80 Query: 72 GGVEHSNQV-TANAELCFLFIE---PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRA 127 G+ HS + L + + I+ L E++ Sbjct: 81 AGIPHSLTIGQNGTHLRSILFTTKGENKHAFYNDVGIYPINDLLIEMMRYTEQWQGHILP 140 Query: 128 EPMTRRLIQVLFDELP--QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185 + +Q + LP + LP + + ++ ++ + + + L + F Sbjct: 141 DDERFMFLQSIKSILPKISIRHLPIALPYTENKRMLQIISYIEENISDKHTLETISKRFG 200 Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMF 244 +S+R L+R +SF Q+ + L+++ A + + + ++ ++A+ GY S +F F Sbjct: 201 LSDRTLSRFFKDTLKISFLQYLKLLRMVKAFELIQQKAHSLSEIAYLTGYQSLASFSYTF 260 Query: 245 KKGLGQTPGRY 255 + P + Sbjct: 261 YQVTNMRPSEF 271 >UniRef50_A6GAR4 Putative transcriptional regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GAR4_9DELT Length = 262 Score = 176 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 65/251 (25%), Positives = 99/251 (39%), Gaps = 5/251 (1%) Query: 11 EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70 D A+ F I S H HR+ QL+ A+ G + + W++P A WI Sbjct: 8 HVDVDRARALGFGIDETYRGFVSDWHSHRRHQLLHAVEGNLELEDSHGRWLLPEAQAAWI 67 Query: 71 PGGVEHSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEP 129 P G H A L L++ PS V P ++ L L+ +R + Sbjct: 68 PAGQRHRVSSAG-ARLQTLYLAPSLVAQPPAETAVFQLPALGHALLARALGWPHHRRLDR 126 Query: 130 MTRRLIQVLFDELPQ--QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187 R L + +E LP + + + + L + A +S Sbjct: 127 RARALFVCVAEEFAAWSLEPGPWRLPQPRSQALAAAMRHVVDNLEDGPTLAEAARQAGVS 186 Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKK 246 R+L R ETG SFR++ ++I A + L + G V VA+ LGY S +AF T F Sbjct: 187 ARSLERRFRAETGSSFREFLLTARMIEAQRLLREPGARVSSVAYRLGYSSPSAFSTAFLA 246 Query: 247 GLGQTPGRYIA 257 +GQ P + Sbjct: 247 RVGQRPKALLR 257 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.170 0.521 Lambda K H 0.267 0.0518 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,015,370,294 Number of Sequences: 3077464 Number of extensions: 108350494 Number of successful extensions: 410784 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 16706 Number of HSP's successfully gapped in prelim test: 2419 Number of HSP's that attempted gapping in prelim test: 350647 Number of HSP's gapped (non-prelim): 27852 length of query: 273 length of database: 1,040,396,356 effective HSP length: 127 effective length of query: 146 effective length of database: 649,558,428 effective search space: 94835530488 effective search space used: 94835530488 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 93 (40.1 bits)