BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (273 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P76241 Uncharacterized HTH-type transcriptional regulat...   567   e-160
UniRef50_A4JQ17 Transcriptional regulator, AraC family n=56 Tax=...   276   6e-73
UniRef50_B5RKL9 Transcriptional regulator, AraC family n=2 Tax=c...   264   3e-69
UniRef50_C5CZV0 Transcriptional regulator, AraC family n=1 Tax=V...   246   5e-64
UniRef50_B8J3U2 Transcriptional regulator, AraC family n=2 Tax=P...   231   2e-59
UniRef50_Q1ZT94 Putative transcriptional regulator n=3 Tax=Photo...   226   7e-58
UniRef50_Q15UL1 Transcriptional regulator, AraC family n=3 Tax=A...   225   1e-57
UniRef50_Q216D2 Transcriptional regulator, AraC family n=7 Tax=B...   224   4e-57
UniRef50_Q7D2T6 Transcriptional regulator, AraC family n=7 Tax=P...   218   1e-55
UniRef50_A9FA95 Transcriptional regulator, AraC family n=2 Tax=P...   215   1e-54
UniRef50_A6W3J4 Helix-turn-helix-domain containing protein AraC ...   215   2e-54
UniRef50_C5AN13 Helix-turn-helix-domain containing protein AraC ...   210   4e-53
UniRef50_Q0B1C2 Transcriptional regulator, AraC family n=5 Tax=P...   210   5e-53
UniRef50_D1RWK8 Transcriptional regulatory protein n=2 Tax=Gamma...   209   6e-53
UniRef50_A8G9B2 Transcriptional regulator, AraC family n=4 Tax=c...   209   9e-53
UniRef50_Q4K9E0 Transcriptional regulator, AraC family n=1 Tax=P...   207   3e-52
UniRef50_D2M677 Transcriptional regulator, AraC family n=1 Tax=R...   206   5e-52
UniRef50_A8I0S5 Transcriptional regulator n=1 Tax=Azorhizobium c...   199   9e-50
UniRef50_B4SJK4 Transcriptional regulator, AraC family n=4 Tax=P...   190   5e-47
UniRef50_Q2NTH9 Putative transcriptional regulator n=1 Tax=Sodal...   189   7e-47
UniRef50_Q2BLH8 Transcriptional Regulator, AraC family protein n...   167   4e-40
UniRef50_A5GBQ3 Transcriptional regulator, AraC family n=2 Tax=B...   164   4e-39
UniRef50_B3QB90 Transcriptional regulator, AraC family n=3 Tax=A...   152   1e-35
UniRef50_D1SXH7 Transcriptional regulator, AraC family n=1 Tax=A...   152   2e-35
UniRef50_B0TZR0 Transcriptional regulator, AraC family n=1 Tax=F...   150   4e-35
UniRef50_B4SSQ8 Transcriptional regulator, AraC family n=3 Tax=S...   148   2e-34
UniRef50_B6JB31 Transcriptional regulator, AraC-family n=5 Tax=P...   147   4e-34
UniRef50_D0J513 Pyridoxamine 5'-phosphate oxidase-related protei...   147   5e-34
UniRef50_Q2F9R4 AraC-type DNA-binding domain-containing protein ...   146   6e-34
UniRef50_B0UH11 Transcriptional regulator, AraC family n=3 Tax=R...   146   8e-34
UniRef50_Q4ZYQ3 Helix-turn-helix, AraC type:Arac protein, arabin...   145   2e-33
UniRef50_A1TK09 Transcriptional regulator, AraC family n=4 Tax=P...   144   4e-33
UniRef50_A5FCF5 Transcriptional regulator, AraC family n=1 Tax=F...   142   8e-33
UniRef50_Q4K6D5 Transcriptional regulator, AraC family n=8 Tax=P...   142   1e-32
UniRef50_D0B292 Transcriptional regulator n=40 Tax=Rhizobiales R...   142   1e-32
UniRef50_Q7D3B7 Transcriptional regulator. AraC family n=2 Tax=A...   142   1e-32
UniRef50_A0AX10 Transcriptional regulator, AraC family n=6 Tax=B...   142   1e-32
UniRef50_C1DH76 Transcriptional regulator, AraC-family n=3 Tax=P...   142   2e-32
UniRef50_Q2SP75 AraC-type DNA-binding domain-containing protein ...   141   2e-32
UniRef50_Q7W072 Probable transcriptional regulator n=3 Tax=Borde...   140   3e-32
UniRef50_D1XHM7 Transcriptional regulator, AraC family n=1 Tax=S...   140   5e-32
UniRef50_B7UVC2 Probable transcriptional regulator n=6 Tax=Pseud...   140   5e-32
UniRef50_Q39NN6 Transcriptional regulator, AraC family n=9 Tax=B...   140   5e-32
UniRef50_A0NPK3 Probable transcriptional regulator protein, AraC...   140   6e-32
UniRef50_B3RAF2 Putative Transcriptional Regulator, AraC family ...   139   1e-31
UniRef50_Q39GD4 Transcriptional regulator, AraC family n=7 Tax=B...   139   1e-31
UniRef50_Q2K0F2 Probable transcriptional regulator protein, AraC...   139   1e-31
UniRef50_Q13ID0 Transcriptional regulator, AraC family n=1 Tax=B...   138   2e-31
UniRef50_D0J7G0 Transcriptional regulator, AraC family n=11 Tax=...   138   2e-31
UniRef50_A7K1S8 Transcriptional regulator AraC family protein n=...   138   2e-31
UniRef50_A4WDQ0 Transcriptional regulator, AraC family n=18 Tax=...   137   3e-31
UniRef50_Q11DK3 Transcriptional regulator, AraC family n=1 Tax=C...   137   3e-31
UniRef50_Q8L1B2 Transcriptional factor PhcT (Fragment) n=1 Tax=C...   137   3e-31
UniRef50_Q2BIT2 Transcriptional regulator, AraC family protein n...   137   5e-31
UniRef50_Q221Z0 Transcriptional regulator, AraC family n=9 Tax=P...   137   5e-31
UniRef50_Q2RRF5 Transcriptional regulator, AraC family n=2 Tax=A...   136   8e-31
UniRef50_B0RW44 Transcriptional regulator, AraC family n=6 Tax=X...   136   8e-31
UniRef50_Q7MFB7 AraC-type DNA-binding domain-containing protein ...   136   8e-31
UniRef50_Q0B9P3 Transcriptional regulator, AraC family n=14 Tax=...   136   9e-31
UniRef50_C7MAZ5 Transcriptional regulator containing an amidase ...   136   9e-31
UniRef50_A3D530 Transcriptional regulator, AraC family n=12 Tax=...   135   1e-30
UniRef50_C3KCF4 Putative transcriptional regulator n=1 Tax=Pseud...   135   1e-30
UniRef50_Q3JQZ2 Transcriptional regulator, AraC family n=59 Tax=...   135   1e-30
UniRef50_B1JZJ0 Transcriptional regulator, AraC family n=2 Tax=B...   135   1e-30
UniRef50_Q13M62 Transcriptional regulator, AraC family n=4 Tax=B...   135   1e-30
UniRef50_B1TGD6 Transcriptional regulator, AraC family n=7 Tax=P...   135   1e-30
UniRef50_Q4KJ22 Transcriptional regulator, AraC family n=7 Tax=P...   134   3e-30
UniRef50_D1RUP3 Transcriptional regulatory protein n=2 Tax=Enter...   134   3e-30
UniRef50_Q14GY1 Transcriptional regulator araC family protein n=...   134   4e-30
UniRef50_B9R0N9 Transcriptional regulator, AraC family protein n...   134   4e-30
UniRef50_A3Y5B2 Probable transcriptional regulator n=1 Tax=Marin...   133   5e-30
UniRef50_A9ISK4 Transcriptional regulator, AraC family n=3 Tax=P...   133   5e-30
UniRef50_Q4K821 Transcriptional regulator, AraC family n=22 Tax=...   133   6e-30
UniRef50_Q391T4 Transcriptional regulator, AraC family n=8 Tax=P...   133   6e-30
UniRef50_Q0KFJ5 Transcriptional regulator, AraC-family n=11 Tax=...   133   6e-30
UniRef50_D1X8C9 Transcriptional regulator, AraC family n=2 Tax=S...   133   6e-30
UniRef50_B4EHM1 AraC family regulatory protein n=5 Tax=Burkholde...   133   8e-30
UniRef50_C3K8M6 Putative AraC-family regulatory protein n=1 Tax=...   132   1e-29
UniRef50_A5F0T8 Transcriptional regulator, AraC/XylS family n=40...   132   1e-29
UniRef50_Q47EU9 Transcriptional regulator, AraC family n=4 Tax=B...   132   2e-29
UniRef50_C4WMA6 AraC family transcriptional regulator n=1 Tax=Oc...   131   2e-29
UniRef50_Q2SEK4 AraC-type DNA-binding domain-containing protein ...   131   3e-29
UniRef50_B0T088 Transcriptional regulator, AraC family n=1 Tax=C...   130   3e-29
UniRef50_C8Q2C9 Transcriptional regulator, AraC family n=1 Tax=P...   130   5e-29
UniRef50_B5WKD5 Transcriptional regulator, AraC family n=1 Tax=B...   129   7e-29
UniRef50_A6W2J3 Transcriptional regulator, AraC family n=1 Tax=M...   129   1e-28
UniRef50_D2B3A1 AraC family transcriptional regulator n=5 Tax=Ac...   129   1e-28
UniRef50_Q0BZS2 Transcriptional regulator, AraC family n=1 Tax=H...   129   1e-28
UniRef50_A1K8N6 Putative AraC-family transcriptional regulator n...   129   1e-28
UniRef50_B7GXZ6 Bacterial regulatory helix-turn-helix protein, A...   127   3e-28
UniRef50_A1VPE7 Transcriptional regulator, AraC family n=2 Tax=C...   126   7e-28
UniRef50_Q28MP8 Transcriptional regulator, AraC family n=1 Tax=J...   125   1e-27
UniRef50_A1BBK0 Transcriptional regulator, AraC family n=2 Tax=A...   125   1e-27
UniRef50_C5CUS1 Transcriptional regulator, AraC family n=1 Tax=V...   125   1e-27
UniRef50_A8GH45 Transcriptional regulator, AraC family n=18 Tax=...   125   2e-27
UniRef50_Q8EHW8 Transcriptional regulator, AraC/XylS family n=3 ...   125   2e-27
UniRef50_B4SQ42 Transcriptional regulator, AraC family n=5 Tax=X...   124   3e-27
UniRef50_B7GW45 Bacterial regulatory helix-turn-helix protein, A...   124   3e-27
UniRef50_A3RTS8 Transcriptional regulator, AraC family n=4 Tax=R...   124   4e-27
UniRef50_Q11FA3 Transcriptional regulator, AraC family n=1 Tax=C...   124   4e-27
UniRef50_D2BBL9 Transcriptional regulator, AraC-family n=18 Tax=...   124   4e-27
UniRef50_A0KTL0 Transcriptional regulator, AraC family n=25 Tax=...   124   5e-27
UniRef50_UPI00019092C6 AraC family transcriptional regulator n=1...   124   5e-27
UniRef50_B0VLM5 Putative transcriptional regulator (AraC family)...   123   6e-27
UniRef50_B1JGH9 Transcriptional regulator, AraC family n=26 Tax=...   123   6e-27
UniRef50_Q1ZB18 Transcriptional Regulator, AraC family protein n...   123   7e-27
UniRef50_C3JKZ1 Transcriptional regulator, AraC family n=2 Tax=R...   123   8e-27
UniRef50_A5V470 Transcriptional regulator, AraC family n=1 Tax=S...   123   9e-27
UniRef50_A6WQB9 Helix-turn-helix-domain containing protein AraC ...   121   3e-26
UniRef50_A8GAI3 Transcriptional regulator, AraC family n=2 Tax=S...   120   5e-26
UniRef50_Q0TI30 Transcriptional regulator, AraC family n=14 Tax=...   120   5e-26
UniRef50_A9IA98 Transcriptional regulator, AraC family n=1 Tax=B...   120   6e-26
UniRef50_A0KEB0 Transcriptional regulator, AraC/XylS family n=25...   120   7e-26
UniRef50_A9HXG4 Transcriptional regulator, AraC family n=3 Tax=P...   119   9e-26
UniRef50_C3JM12 Transcriptional regulator, AraC family n=2 Tax=R...   119   1e-25
UniRef50_A8T3D4 AraC-type DNA-binding domain-containing protein ...   119   1e-25
UniRef50_C9PF84 Transcriptional regulator AraC family n=1 Tax=Vi...   119   2e-25
UniRef50_Q47Y50 Transcriptional regulator, araC family n=1 Tax=C...   119   2e-25
UniRef50_C4XL68 AraC family transcriptional regulator n=2 Tax=De...   118   2e-25
UniRef50_Q7CRR0 Transcriptional regulator, AraC family n=4 Tax=R...   118   2e-25
UniRef50_B3Q9E6 Transcriptional regulator, AraC family n=2 Tax=R...   118   2e-25
UniRef50_B1KGB7 Transcriptional regulator, AraC family n=2 Tax=S...   118   3e-25
UniRef50_C9PF82 Substrate-binding transcriptional regulator AraC...   117   3e-25
UniRef50_C1A6S8 AraC family transcriptional regulator n=1 Tax=Ge...   117   3e-25
UniRef50_B9JII8 Transcriptional regulator protein n=1 Tax=Agroba...   117   4e-25
UniRef50_A6V354 Transcriptional regulator, AraC family n=3 Tax=P...   117   5e-25
UniRef50_A9ILC9 Transcriptional regulator, AraC family n=3 Tax=B...   116   7e-25
UniRef50_Q5E435 Transcriptional regulator, AraC family n=3 Tax=V...   115   1e-24
UniRef50_C6RQZ7 Transcriptional regulator, AraC family n=1 Tax=A...   115   1e-24
UniRef50_C9NXQ1 Transcriptional regulator AraC family n=1 Tax=Vi...   115   2e-24
UniRef50_D1P6X5 Transcriptional regulator, AraC family n=1 Tax=P...   115   2e-24
UniRef50_B7H290 Bacterial regulatory helix-turn-helix protein, A...   114   4e-24
UniRef50_B5XX95 Transcriptional regulator, AraC family n=7 Tax=E...   113   5e-24
UniRef50_B2UKA3 Transcriptional regulator, AraC family n=8 Tax=B...   113   8e-24
UniRef50_C8QCP4 Transcriptional regulator, AraC family n=1 Tax=P...   113   8e-24
UniRef50_A3QGH9 Transcriptional regulator, AraC family n=1 Tax=S...   113   8e-24
UniRef50_Q7NRZ6 Probable transcriptional regulator AraC family n...   112   1e-23
UniRef50_B5GYF3 AraC-family transcriptional regulator n=4 Tax=Ac...   112   1e-23
UniRef50_Q3JG82 AraC family regulatory protein n=50 Tax=Proteoba...   112   1e-23
UniRef50_Q7VTI7 AraC-family regulatory protein n=3 Tax=Bordetell...   112   2e-23
UniRef50_Q2BQ21 Transcriptional regulator, AraC family protein n...   112   2e-23
UniRef50_Q84HW2 Transcription regulator n=1 Tax=Rhizobium sp. TA...   112   2e-23
UniRef50_C8QEY4 Transcriptional regulator, AraC family n=1 Tax=P...   112   2e-23
UniRef50_UPI0001B55F3C AraC family transcriptional regulator n=3...   112   2e-23
UniRef50_B4EJY3 AraC family regulatory protein n=10 Tax=Burkhold...   111   2e-23
UniRef50_A6V4X5 Probable transcriptional regulator n=7 Tax=Pseud...   111   3e-23
UniRef50_B6ELX6 HTH-type transcriptional regulator, AraC family ...   110   4e-23
UniRef50_A5U9G2 AraC-family transcriptional regulator n=12 Tax=M...   110   5e-23
UniRef50_Q2L001 AraC-family transcriptional regulator n=4 Tax=Bo...   110   6e-23
UniRef50_Q47UH5 Substrate-binding transcriptional regulator, Ara...   110   6e-23
UniRef50_Q01YV9 Transcriptional regulator, AraC family n=1 Tax=C...   110   6e-23
UniRef50_C6DFV4 Transcriptional regulator, AraC family n=1 Tax=P...   110   6e-23
UniRef50_B1LVX0 Transcriptional regulator, AraC family n=3 Tax=R...   110   7e-23
UniRef50_A0KHN7 Transcriptional regulator, AraC family n=1 Tax=A...   109   8e-23
UniRef50_A9BNM6 Transcriptional regulator, AraC family n=3 Tax=P...   109   8e-23
UniRef50_D0L975 Helix-turn-helix-domain containing protein AraC ...   109   1e-22
UniRef50_D1BCS3 DNA-binding domain-containing protein, AraC-type...   108   2e-22
UniRef50_B4SPX2 AraC protein arabinose-binding/dimerisation n=2 ...   108   2e-22
UniRef50_C1MBM6 Transcriptional regulator n=2 Tax=Citrobacter Re...   108   3e-22
UniRef50_B4SMW0 Transcriptional regulator, AraC family n=3 Tax=S...   108   3e-22
UniRef50_B4SKF1 Transcriptional regulator, AraC family n=2 Tax=S...   107   3e-22
UniRef50_C3JWU5 Transcriptional regulator, AraC family n=4 Tax=R...   107   6e-22
UniRef50_B2I1A9 AraC-type DNA-binding domain-containing protein ...   105   2e-21
UniRef50_C7JHN7 Transcriptional regulator AraC n=8 Tax=Acetobact...   105   2e-21
UniRef50_Q28KW4 Transcriptional regulator, AraC family n=1 Tax=J...   105   2e-21
UniRef50_D1BHF8 DNA-binding domain-containing protein, AraC-type...   105   2e-21
UniRef50_A6SYJ9 Transcriptional regulator, AraC family n=2 Tax=O...   104   3e-21
UniRef50_A8G994 Transcriptional regulator, AraC family n=12 Tax=...   104   3e-21
UniRef50_C3JLV5 AraC-family transcriptional regulator n=2 Tax=Rh...   104   3e-21
UniRef50_A4CF02 Transcriptional regulator, araC family protein n...   104   3e-21
UniRef50_Q13VV8 Transcriptional regulator, AraC family n=2 Tax=P...   104   4e-21
UniRef50_B5EUU3 Transcriptional regulator, AraC/XylS family n=29...   104   4e-21
UniRef50_A9BQK3 Transcriptional regulator, AraC family n=8 Tax=B...   104   4e-21
UniRef50_C8QA12 Transcriptional regulator, AraC family n=1 Tax=P...   104   4e-21
UniRef50_D1WVC3 Transcriptional regulator, AraC family n=3 Tax=A...   103   4e-21
UniRef50_Q212B5 Transcriptional regulator, AraC family n=1 Tax=R...   103   5e-21
UniRef50_A6VY36 Helix-turn-helix-domain containing protein AraC ...   103   6e-21
UniRef50_D1VIF5 Transcriptional regulator, AraC family n=1 Tax=F...   103   8e-21
UniRef50_C3X452 Putative uncharacterized protein n=2 Tax=Oxaloba...   102   1e-20
UniRef50_C7I316 Transcriptional regulator, AraC family n=1 Tax=T...   102   1e-20
UniRef50_Q13JN4 Transcriptional regulator, AraC family n=13 Tax=...   102   1e-20
UniRef50_Q0B8S9 Transcriptional regulator, AraC family n=1 Tax=B...   102   1e-20
UniRef50_Q2KXY1 AraC-family transcriptional regulator n=5 Tax=Pr...   102   2e-20
UniRef50_D1XNW1 Transcriptional regulator, AraC family n=1 Tax=S...   102   2e-20
UniRef50_Q5LMG8 Transcriptional regulator, AraC family n=1 Tax=R...   101   2e-20
UniRef50_C6CCZ8 Transcriptional regulator, AraC family n=3 Tax=D...   101   3e-20
UniRef50_D1BGA1 DNA-binding domain-containing protein, AraC-type...   100   4e-20
UniRef50_B9K583 Transcriptional regulator n=3 Tax=Alphaproteobac...   100   4e-20
UniRef50_B9TN09 HTH-type transcriptional repressor of iron prote...   100   5e-20
UniRef50_B5I4G1 AraC-family transcriptional regulator n=1 Tax=St...   100   7e-20
UniRef50_A8L2S5 Transcriptional regulator, AraC family n=3 Tax=A...    99   2e-19
UniRef50_C0YIN0 AraC/XylS family transcriptional regulator n=1 T...    99   2e-19
UniRef50_D1BFL9 DNA-binding domain-containing protein, AraC-type...    99   2e-19
UniRef50_Q091X7 Helix-turn-helix, AraC type n=1 Tax=Stigmatella ...    98   4e-19
UniRef50_A8AKK6 Putative uncharacterized protein n=1 Tax=Citroba...    97   7e-19
UniRef50_C3JND7 Transcriptional regulator, AraC family n=2 Tax=R...    96   1e-18
UniRef50_Q5FU43 Transcriptional regulator, AraC family n=1 Tax=G...    96   1e-18
UniRef50_A8U313 Helix-turn-helix, AraC type:Arac protein, arabin...    96   2e-18
UniRef50_A0R133 Transcriptional regulator, AraC family protein n...    95   3e-18
UniRef50_D0J7V7 Transcriptional regulator, AraC family n=6 Tax=P...    93   1e-17
UniRef50_D1BBW6 DNA-binding domain-containing protein, AraC-type...    92   2e-17
UniRef50_D1WSG5 Transcriptional regulator, AraC family n=3 Tax=S...    92   2e-17
UniRef50_Q1ZV01 Transcriptional regulator, AraC family protein n...    92   2e-17
UniRef50_C0YJ90 AraC family transcriptional regulator n=1 Tax=Ch...    92   2e-17
UniRef50_D1UHS6 Transcriptional regulator, AraC family n=1 Tax=B...    92   2e-17
UniRef50_C7R5F1 Transcriptional regulator, AraC family n=1 Tax=J...    91   3e-17
UniRef50_D1XRU9 Transcriptional regulator, AraC family n=4 Tax=A...    91   4e-17
UniRef50_A5VF29 Transcriptional regulator, AraC family n=2 Tax=A...    90   1e-16
UniRef50_Q7NRR7 Probable transcriptional regulator n=1 Tax=Chrom...    89   2e-16
UniRef50_UPI000050FCF9 AraC family transcriptional regulator n=1...    88   3e-16
UniRef50_A8L421 Transcriptional regulator, AraC family n=12 Tax=...    88   3e-16
UniRef50_C0YKZ5 AraC family transcriptional regulator n=1 Tax=Ch...    87   5e-16
UniRef50_D1VDY4 Transcriptional regulator, AraC family n=1 Tax=F...    87   8e-16
UniRef50_B5H317 AraC-type DNA-binding domain-containing protein ...    86   9e-16
UniRef50_C6C927 Transcriptional regulator, AraC family n=2 Tax=D...    86   1e-15
UniRef50_B9T9R1 Putative uncharacterized protein n=4 Tax=Ricinus...    85   2e-15
UniRef50_D1BHB2 Transcriptional regulator, AraC family n=10 Tax=...    85   2e-15
UniRef50_C9PG34 Transcriptional regulator AraC family n=1 Tax=Vi...    85   2e-15
UniRef50_A5EPW3 Transcriptional regulator, AraC family n=3 Tax=B...    85   3e-15
UniRef50_Q2S7S2 AraC-type DNA-binding domain-containing protein ...    84   4e-15
UniRef50_A5FK83 Transcriptional regulator, AraC family n=3 Tax=B...    84   6e-15
UniRef50_C3JVD6 Transcriptional regulator, AraC family n=3 Tax=R...    83   1e-14
UniRef50_Q3HKF1 Transcriptional regulator, AraC family n=2 Tax=R...    82   2e-14
UniRef50_C8QDM1 Transcriptional regulator, AraC family n=1 Tax=P...    82   2e-14
UniRef50_D0LZ72 Transcriptional regulator, AraC family n=1 Tax=H...    82   2e-14
UniRef50_A8LCQ9 Transcriptional regulator, AraC family n=1 Tax=F...    81   5e-14
UniRef50_C4WPU9 AraC family transcriptional regulator n=1 Tax=Oc...    80   9e-14
UniRef50_A9IG40 Putative transcriptional regulator n=1 Tax=Borde...    79   2e-13
UniRef50_D0KLM1 Transcriptional regulator, AraC family n=2 Tax=E...    78   3e-13
UniRef50_A9GKK5 Transcriptional regulator, AraC family n=1 Tax=S...    78   3e-13
UniRef50_A6GAR4 Putative transcriptional regulator n=1 Tax=Plesi...    75   3e-12
UniRef50_UPI000197B237 hypothetical protein BACCOPRO_02201 n=1 T...    75   3e-12
UniRef50_Q1LNA3 Transcriptional regulator, AraC family n=1 Tax=C...    74   4e-12
UniRef50_B4R9V1 Transcriptional regulator, AraC family n=1 Tax=P...    74   6e-12
UniRef50_B5CUH6 Putative uncharacterized protein n=1 Tax=Bactero...    74   8e-12
UniRef50_UPI00016AD7BA helix-turn-helix- domain containing prote...    74   8e-12
UniRef50_Q28SV1 Transcriptional regulator, AraC family n=1 Tax=J...    72   2e-11
UniRef50_A3XQJ9 Probable transcription regulator protein n=1 Tax...    72   2e-11
UniRef50_C5PU57 AraC family transcriptional regulator n=1 Tax=Sp...    72   2e-11
UniRef50_C7PA31 Transcriptional regulator, AraC family n=1 Tax=C...    71   3e-11
UniRef50_A5KTY3 Transcriptional regulator, araC family protein n...    71   4e-11
UniRef50_B5GU05 HTH-type transcriptional repressor n=1 Tax=Strep...    69   2e-10
UniRef50_B3JKA4 Putative uncharacterized protein n=1 Tax=Bactero...    69   2e-10
UniRef50_A6ED21 Transcriptional regulator, AraC family protein n...    69   2e-10
UniRef50_Q1QZK4 Transcriptional regulator, AraC family n=1 Tax=C...    69   2e-10
UniRef50_C2FVA1 AraC family transcriptional regulator n=1 Tax=Sp...    68   3e-10
UniRef50_C3JMH4 Transcriptional regulator, AraC family n=2 Tax=R...    67   6e-10
UniRef50_A0KFD0 Transcriptional regulator, AraC family n=1 Tax=A...    67   7e-10
UniRef50_A6B1F0 Transcriptional regulator, AraC/XylS family (Fra...    66   1e-09
UniRef50_C7PGY2 Transcriptional regulator, AraC family n=1 Tax=C...    63   9e-09

>UniRef50_P76241 Uncharacterized HTH-type transcriptional regulator yeaM n=55
           Tax=Enterobacteriaceae RepID=YEAM_ECOLI
          Length = 273

 Score =  567 bits (1462), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 273/273 (100%), Positives = 273/273 (100%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW
Sbjct: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120
           MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN
Sbjct: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120

Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180
           RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW
Sbjct: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180

Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240
           AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF
Sbjct: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240

Query: 241 ITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ 273
           ITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ
Sbjct: 241 ITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ 273


>UniRef50_A4JQ17 Transcriptional regulator, AraC family n=56 Tax=Proteobacteria
           RepID=A4JQ17_BURVG
          Length = 325

 Score =  276 bits (705), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 132/250 (52%), Positives = 168/250 (67%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
           +PD     AVA C+H        PVH+H+KGQL+LALHGA+TC V  A W+VPPQ  VWI
Sbjct: 46  DPDAIDRPAVAMCMHVDEHAPEIPVHKHQKGQLVLALHGAVTCRVAGAFWIVPPQCGVWI 105

Query: 71  PGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130
           PG + HSN  T NA LC+LF EP  V +PT CCTL ISP+ RE+I+ LA           
Sbjct: 106 PGEMPHSNHATPNARLCYLFAEPGVVDLPTECCTLSISPMLREMIMHLAGAPLDYEQGGH 165

Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190
           T RL +VL  EL   P ++L+LPV+ HP+IR M + +   P +   + QWA   AMSER+
Sbjct: 166 TDRLARVLLHELTLMPVERLYLPVTDHPRIRQMADALNANPGDRSTVSQWAKRLAMSERS 225

Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250
           LARL+V ETGL+F +WRQQLQL++A++ L  G +VQ+V+  LGY+S TAFITMFKK LG 
Sbjct: 226 LARLVVSETGLTFGRWRQQLQLLVAVRELAGGASVQRVSDELGYESVTAFITMFKKALGH 285

Query: 251 TPGRYIARLT 260
           +PGRY A L 
Sbjct: 286 SPGRYFAALA 295


>UniRef50_B5RKL9 Transcriptional regulator, AraC family n=2 Tax=cellular organisms
           RepID=B5RKL9_KLEP3
          Length = 264

 Score =  264 bits (674), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 124/250 (49%), Positives = 168/250 (67%)

Query: 10  YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69
           +  D   +AA+A  + +  +      H HRKGQLIL++ GA+ C V++ALW+VPP +AVW
Sbjct: 14  FNADDFSQAAIALHVSSSGEYAGQRPHAHRKGQLILSMRGAVRCEVDDALWLVPPGHAVW 73

Query: 70  IPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129
           +PG + H  ++T NA+ CFLFIEP A  MP  CCT+ ++PL REL+L LA +  T   + 
Sbjct: 74  VPGEIPHRCRITKNADTCFLFIEPGAAAMPEICCTIAVTPLVRELVLYLAEQEHTYSPDS 133

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
            T RL  VL + +P  P + LHLPVS HPKIR M E +   P +   L QWA   A+SER
Sbjct: 134 KTARLAAVLLEHIPDVPVEALHLPVSDHPKIRIMAEALFNEPDDRRTLKQWAAHLAISER 193

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
           +LARLI + TG+SF +WRQQL L++AL  L +G  VQ+VA TLGYDS +AFITMF+K LG
Sbjct: 194 SLARLIKEATGMSFGRWRQQLHLMIALSHLSEGQPVQRVAGTLGYDSVSAFITMFRKALG 253

Query: 250 QTPGRYIARL 259
           ++P +Y + L
Sbjct: 254 KSPTQYFSSL 263


>UniRef50_C5CZV0 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus
           S110 RepID=C5CZV0_VARPS
          Length = 292

 Score =  246 bits (629), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 121/256 (47%), Positives = 159/256 (62%)

Query: 3   HRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMV 62
           HR     +E D+      A  I         P HQH +GQL + L G +TC V  ALWM 
Sbjct: 35  HRQGAWTFEFDKMEARVAAVRIRTEALAEGLPAHQHPQGQLAMVLRGTVTCEVPGALWMA 94

Query: 63  PPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRT 122
           P    +WIPGGV HS +V+A   +CFLF+E +A  MP TCC+L +SPL RELIL LA   
Sbjct: 95  PLHGGLWIPGGVPHSLRVSAEGNVCFLFVEDAAAAMPQTCCSLSVSPLLRELILYLAALP 154

Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182
              + EP   RL  VL D+L + P + +HLPVS  P++R +++ + + P +     QWA 
Sbjct: 155 EGAQREPQALRLHAVLLDQLARMPTEAMHLPVSEEPRLRRLIDALMRDPADRTTAAQWAS 214

Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242
             AMSER L RL+  ETG+SF +W Q+L+LI+ALQ L  G +VQ+VAH LGYDS +AFI 
Sbjct: 215 RLAMSERTLTRLVQLETGMSFGRWSQRLRLIVALQWLTSGLSVQQVAHGLGYDSVSAFIA 274

Query: 243 MFKKGLGQTPGRYIAR 258
           MF+K +GQ P RY+AR
Sbjct: 275 MFRKAMGQPPARYLAR 290


>UniRef50_B8J3U2 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria
           RepID=B8J3U2_DESDA
          Length = 269

 Score =  231 bits (588), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 119/263 (45%), Positives = 155/263 (58%), Gaps = 1/263 (0%)

Query: 7   LNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQY 66
           L  + PD+      A  +    +E   P HQH  GQL+L L G+  C V   LW+VPPQ 
Sbjct: 7   LAAFSPDQWDIPVTARKVDVVRNEYEMPTHQHTAGQLLLTLRGSTACRVFEDLWLVPPQC 66

Query: 67  AVWIPGGVEHSNQVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQ 125
           AVW+P    H N++TA + +C LFI    + + P TCCTL ISPL RELI  +A      
Sbjct: 67  AVWVPPNTPHCNRITARSSVCLLFIRQEHIRLLPATCCTLSISPLVRELIRHVAALPPED 126

Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185
                  RLIQVL DEL + P   L LPVSS  +++++ E + + P E   L  WA    
Sbjct: 127 MLAERGERLIQVLLDELSRMPATGLRLPVSSDIRLQSIAESITEAPAERKDLSAWARHIG 186

Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245
           MS R+LARL+V+ETGLSF +WRQQL L+MA+Q L  G +VQ+ A  LGY+S TAFITMFK
Sbjct: 187 MSRRSLARLVVRETGLSFGRWRQQLLLVMAIQMLSDGISVQQTAWDLGYESVTAFITMFK 246

Query: 246 KGLGQTPGRYIARLTTVSPQSAK 268
           K LG +P +Y+ R      +S  
Sbjct: 247 KALGASPAKYVQRYFATGTESGS 269


>UniRef50_Q1ZT94 Putative transcriptional regulator n=3 Tax=Photobacterium
           RepID=Q1ZT94_PHOAS
          Length = 266

 Score =  226 bits (576), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 107/262 (40%), Positives = 154/262 (58%), Gaps = 4/262 (1%)

Query: 1   MMHRLNLN----GYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVE 56
           M   + LN     ++ D + + AVA        +   P H HRKGQL+L L G + C + 
Sbjct: 1   MTKNITLNKTIPSFDSDSYSQKAVAMRFSRSDVDEELPFHTHRKGQLVLPLSGCVRCKIA 60

Query: 57  NALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELIL 116
           NA+WMVP   AVWIP  V HS  ++ + ++C LFIEP  + +P   CTL +SPL RELI+
Sbjct: 61  NAIWMVPTNCAVWIPSQVPHSLTISDDIDICNLFIEPDVIGLPEKACTLSVSPLLRELIV 120

Query: 117 TLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGA 176
            LA        E  T RL+ VL  EL   P +Q   P+   P+++ +   +   P +   
Sbjct: 121 KLAELDQFYEDEGNTARLVDVLIYELSTMPSEQFDFPIPEEPRLQKIALALIANPSDRST 180

Query: 177 LGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDS 236
           +G+WA  +AMSER LARL+ +E GL+F  WR QL +++ALQ L  G+ VQ+++  LGY+S
Sbjct: 181 VGEWASKYAMSERTLARLVKQELGLTFGNWRGQLHIVIALQKLSSGEPVQRISEDLGYES 240

Query: 237 TTAFITMFKKGLGQTPGRYIAR 258
            +AFIT FK+ LG+ P +YI +
Sbjct: 241 VSAFITFFKRTLGRPPKQYIKK 262


>UniRef50_Q15UL1 Transcriptional regulator, AraC family n=3 Tax=Alteromonadales
           RepID=Q15UL1_PSEA6
          Length = 263

 Score =  225 bits (574), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 108/225 (48%), Positives = 147/225 (65%)

Query: 34  PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93
           P+H H KGQLILALHG +TC V+  +WMVP Q A+WIP    HSN+ + +AELC +FI+P
Sbjct: 36  PLHTHSKGQLILALHGHVTCEVQGKMWMVPTQSAIWIPTHTLHSNRASDHAELCHVFIQP 95

Query: 94  SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153
             + MP   CT  +S L +ELI   A +         T RL QVL D + + PQQ ++LP
Sbjct: 96  GELRMPDKTCTFALSVLAKELICHFAKQDQHYPHFSPTNRLAQVLIDVVSESPQQPMNLP 155

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
           + SHP +  + + +   P +   L QWA +FAMSER LARLI +ETG++F  WR Q+ +I
Sbjct: 156 LPSHPTVAKLAQQLLSYPDDKKTLPQWASYFAMSERTLARLIKRETGMTFGHWRAQMHVI 215

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           +A+Q L+   TVQ+V+  LGY S +AFITMFK  LG++P RYI +
Sbjct: 216 IAVQKLMTNMTVQRVSEYLGYSSVSAFITMFKNILGESPKRYIKQ 260


>UniRef50_Q216D2 Transcriptional regulator, AraC family n=7 Tax=Bacteria
           RepID=Q216D2_RHOPB
          Length = 280

 Score =  224 bits (570), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 109/264 (41%), Positives = 165/264 (62%), Gaps = 2/264 (0%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
           +PD      VAF +      L    H+HRK QL+L+L G +TC  ++ LW+VPPQ+A+WI
Sbjct: 15  DPDDIPRPVVAFGVTLAGPGLELAPHRHRKAQLLLSLRGVLTCEAQSGLWLVPPQHAIWI 74

Query: 71  PGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129
           PGG  H+ + T   E   +F+EP+  + MP +CCT+ ++PL REL++  A          
Sbjct: 75  PGGALHAIRATGTIEGYDIFVEPALTLGMPASCCTMSVTPLLRELLVRAAGFPLLYPEGG 134

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
               L  +L DE+     Q+L+LP+ +  ++R +VE+M   P + G +  WA    +SER
Sbjct: 135 AESHLFTLLLDEVATASVQRLYLPMPADVRLRRIVELMMADPTDRGTMASWAKRAGLSER 194

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
            LARL+ +ETG+SF +WRQQL +++ALQ + +G  +Q++A  LGY+S  +F+TMF+K LG
Sbjct: 195 TLARLLARETGMSFGRWRQQLTIMLALQRMAEGAPIQRLAVELGYESAASFVTMFRKTLG 254

Query: 250 QTPGRYIARLTTVSPQSAKPDPRQ 273
            +PGRY+ARL   SP +A  DP+Q
Sbjct: 255 SSPGRYMARLRG-SPAAADQDPKQ 277


>UniRef50_Q7D2T6 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria
           RepID=Q7D2T6_AGRT5
          Length = 215

 Score =  218 bits (556), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 102/210 (48%), Positives = 141/210 (67%), Gaps = 2/210 (0%)

Query: 47  LHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLK 106
           L G +TC V + +WMVPP   VW+PGG+ HSN  TANA L FLFIEP A  +P  CCTL 
Sbjct: 3   LRGGVTCRVPSGMWMVPPHCGVWVPGGMLHSNVATANARLFFLFIEPGAADLPNRCCTLS 62

Query: 107 ISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEM 166
           +SPL RELI+ LA+++    A+  +  +  +L   L + P + LHLP++  P++  +   
Sbjct: 63  LSPLVRELIIELADQSEVATAD--SELMTTLLLSALSRMPVEHLHLPLTDEPRLARIASE 120

Query: 167 MAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQ 226
           +A  P +   + QWA   AMSE +LARL+  +TGL+F +WRQQLQLI+A++ L  G TVQ
Sbjct: 121 LADDPSDRSTMAQWARRVAMSENSLARLVQHQTGLTFGRWRQQLQLIIAIRSLASGATVQ 180

Query: 227 KVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           +V+  LGY+S +AFITMFKK LG +P RY+
Sbjct: 181 QVSGDLGYESVSAFITMFKKALGTSPSRYL 210


>UniRef50_A9FA95 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria
           RepID=A9FA95_SORC5
          Length = 277

 Score =  215 bits (547), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 103/232 (44%), Positives = 147/232 (63%), Gaps = 1/232 (0%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
           T  L S  H HR+ QL     G +TC   NALW+VPP+ A+WIP GV H  +  A  E  
Sbjct: 33  TGGLESEFHSHRESQLFFLERGEVTCEASNALWIVPPRSALWIPAGVLHKIRGRAPLEGY 92

Query: 88  FLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146
            +F+EP  A ++P  CC + ++PL REL++ LA R      +    RL+ VLFDEL    
Sbjct: 93  GVFMEPDVAPSLPAECCAVSVTPLFRELLVRLAARPALYDLDGPDARLVAVLFDELAAAT 152

Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206
            ++  LP+ + P++R +V+ MA+ P +   +G WA    + ER L RL+V+ETGLSF +W
Sbjct: 153 IEKHRLPMPADPRLRKLVDAMAENPADGATMGSWARRIGVGERTLNRLLVRETGLSFGRW 212

Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           RQQL +++ALQ L +G +VQ VA  LGY+S ++F+TMF+K LG +P RY+AR
Sbjct: 213 RQQLHIVLALQRLSRGASVQSVASDLGYESASSFVTMFRKALGASPARYMAR 264


>UniRef50_A6W3J4 Helix-turn-helix-domain containing protein AraC type n=9
           Tax=Gammaproteobacteria RepID=A6W3J4_MARMS
          Length = 273

 Score =  215 bits (547), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 99/224 (44%), Positives = 148/224 (66%), Gaps = 2/224 (0%)

Query: 33  SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92
           +P H H+KGQL+L L G +T  +++ +W+VPP+ AVWIP  V H NQ++ NA++C LF++
Sbjct: 43  TPWHHHQKGQLVLPLTGVVTSFIDDKMWLVPPRCAVWIPSNVMHRNQISPNADVCMLFVD 102

Query: 93  PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152
            + + +P   CTL I+P  RELIL L  +   ++ +P T RL+ VL D+L Q  +++   
Sbjct: 103 STNLALPEITCTLTITPFVRELILHLHTQQDYEKTDPATGRLVDVLLDQLIQLEREEFDF 162

Query: 153 PVSSHPKI-RTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211
           P+   P + R  +E++A+ P E   LG+WA  FAMSER LAR+I +   L+F QWR QL 
Sbjct: 163 PIPDEPTLNRLALELIAR-PNEKRTLGEWASDFAMSERTLARMIKRHVQLTFGQWRSQLH 221

Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           +++ALQ L     +Q ++  LGYDS +AFIT FKK LG++P +Y
Sbjct: 222 IVLALQKLAINLPIQTISEELGYDSVSAFITFFKKALGKSPRQY 265


>UniRef50_C5AN13 Helix-turn-helix-domain containing protein AraC type n=15
           Tax=cellular organisms RepID=C5AN13_BURGB
          Length = 283

 Score =  210 bits (534), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 96/223 (43%), Positives = 145/223 (65%), Gaps = 1/223 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H+HR+ QL+ ++ G + C +E+ +W+VPPQ AVWIPG + H+ + +   E   LF+EP A
Sbjct: 39  HRHRRAQLLYSVRGILNCEIEDGVWIVPPQCAVWIPGDLPHAARGSGETECHCLFVEPDA 98

Query: 96  V-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
              +P +CCT+ +SPL REL+L +A             RLI VL DEL   P + LHLP+
Sbjct: 99  APDLPKSCCTISVSPLLRELLLKVACFPELYPLGSREDRLIAVLLDELAMAPVEDLHLPM 158

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
              P++R + EM+   P +  + G WA    MSER+++RL++ E G+SF +W +QL +I+
Sbjct: 159 PRDPRLRRLAEMLLTDPTDKTSKGDWATRIGMSERSMSRLLMHEIGMSFGRWCRQLHVIL 218

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           ALQ L KG++VQ VA  LGY++ + F+TMF+K +G+ P RY+A
Sbjct: 219 ALQRLTKGESVQTVALELGYENASGFVTMFRKAVGKPPARYLA 261


>UniRef50_Q0B1C2 Transcriptional regulator, AraC family n=5 Tax=Proteobacteria
           RepID=Q0B1C2_BURCM
          Length = 273

 Score =  210 bits (534), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 97/252 (38%), Positives = 150/252 (59%)

Query: 4   RLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63
           ++N   ++PD      ++  +     E   P+H HRKGQ+++AL G++ C   +  W+VP
Sbjct: 12  KINYQPFDPDSVDLPVISVLLETSGKEDELPMHVHRKGQMVVALSGSVMCRSPSGWWIVP 71

Query: 64  PQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTT 123
           P  AVWIPGG+ HSN  +  A+L  +FI P    +PT C +  I+PL RELI +LA    
Sbjct: 72  PNGAVWIPGGIPHSNHASDFAKLYVIFIPPDEAGLPTDCRSFTITPLIRELIRSLARFPP 131

Query: 124 TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183
               +    RL +VL D+L       + LP+S +P+++ +   +   P +   + +W   
Sbjct: 132 DYPKDGPVGRLARVLLDQLALLAPDDVFLPISDNPRLQQIASALLDNPADRSTIAEWGRR 191

Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITM 243
           +AMSER LARL+  ETG++F +WR++L +I+ALQ L  G +V  VA  LGY+   +FITM
Sbjct: 192 YAMSERTLARLVRSETGMTFGRWRERLHIIIALQRLSAGASVHAVALELGYEGPNSFITM 251

Query: 244 FKKGLGQTPGRY 255
           FKK +GQ+PG++
Sbjct: 252 FKKTMGQSPGKF 263


>UniRef50_D1RWK8 Transcriptional regulatory protein n=2 Tax=Gammaproteobacteria
           RepID=D1RWK8_SEROD
          Length = 284

 Score =  209 bits (533), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 101/223 (45%), Positives = 140/223 (62%), Gaps = 1/223 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H+HRK QLI  + G I C  EN LW+VPPQ A+W+PG V H+ Q   + E   LF++  A
Sbjct: 47  HRHRKAQLIYTVRGMIRCEAENGLWLVPPQCALWMPGNVLHNAQGAGDTECYCLFVDQDA 106

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           +  +PT CCTL +SPL REL+L  +        +    RL  VL D++   P + LHLPV
Sbjct: 107 IAGLPTHCCTLAVSPLLRELLLQASGFDPLYDEQGPEGRLTTVLLDQVVNAPIENLHLPV 166

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
           S   +IR + E +   P +   L QWA    MSER+L R + ++ G+SF  WR+QL +++
Sbjct: 167 SQDARIRQLTERLLANPADKATLNQWAQRIGMSERSLNRTLQQQMGMSFGHWRRQLHVML 226

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           ALQ L KGD+VQKVA  LGY+S + F+TMF+K +G+ P RY+A
Sbjct: 227 ALQRLTKGDSVQKVALDLGYESASGFVTMFRKAVGKPPARYLA 269


>UniRef50_A8G9B2 Transcriptional regulator, AraC family n=4 Tax=cellular organisms
           RepID=A8G9B2_SERP5
          Length = 284

 Score =  209 bits (532), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 100/223 (44%), Positives = 143/223 (64%), Gaps = 1/223 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H+HRK QLI  + G I C VEN LW+VPPQ A+W+P  V H+ Q  + +E   LF++  A
Sbjct: 47  HRHRKAQLIYTVRGMIRCEVENGLWLVPPQCALWMPSNVLHNAQGASASECYCLFVDQDA 106

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           +  +PT CCTL +SPL REL+   +        +    RL  VL D+L + P + LHLPV
Sbjct: 107 IAGLPTHCCTLAVSPLLRELLFQASAFEQLYDQQGPEGRLAGVLLDQLVKAPVENLHLPV 166

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
           S+  +IR + E +   P +   LGQWA    MSER+L R + ++ G+SF  WR+QL +++
Sbjct: 167 SNDARIRQLTERLLANPADKATLGQWAQRIGMSERSLNRTLQQQMGMSFGHWRRQLHVVL 226

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           ALQ L +GD+VQ+VA  LGY+S + F+TMF+K +G+ P RY+A
Sbjct: 227 ALQRLTQGDSVQRVALDLGYESASGFVTMFRKAVGKPPARYLA 269


>UniRef50_Q4K9E0 Transcriptional regulator, AraC family n=1 Tax=Pseudomonas
           fluorescens Pf-5 RepID=Q4K9E0_PSEF5
          Length = 271

 Score =  207 bits (527), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 106/248 (42%), Positives = 147/248 (59%), Gaps = 1/248 (0%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
           +PD       A  I         P H HRK QL+  L G ++C     LW+ PPQ AVWI
Sbjct: 12  DPDAIARPVCALRISTQEQRWERPWHSHRKAQLLFPLSGVLSCESAEGLWLAPPQCAVWI 71

Query: 71  PGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129
           P   +H  Q   NA    LF+EP  A ++P  CCTL +SPL +EL+   A        + 
Sbjct: 72  PSATDHRVQGLENALGYCLFVEPEHARSLPQACCTLAVSPLLQELLQRCAQLPYLYDQQG 131

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
              RL+ V  DEL   P++Q+HLP+  H ++R +   + + P    +LGQWA    +SER
Sbjct: 132 AEGRLMAVALDELAAAPREQIHLPMPRHEQLRRLAGQILEQPERRLSLGQWAEQIGLSER 191

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
           +L+RLIV ETGLSF +W++QL +++ L+ L +GD+V++VA TLGYDS +AFI MFKK +G
Sbjct: 192 SLSRLIVAETGLSFGRWQRQLHILLGLKQLGRGDSVERVALTLGYDSASAFIRMFKKAVG 251

Query: 250 QTPGRYIA 257
           Q PGR+ A
Sbjct: 252 QPPGRFFA 259


>UniRef50_D2M677 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas
           palustris DX-1 RepID=D2M677_RHOPA
          Length = 294

 Score =  206 bits (525), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 96/239 (40%), Positives = 150/239 (62%), Gaps = 2/239 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H+H K QL+    G I C VE+ +W+VPPQ A+WIPGG+ H+   +   E   LF+ P A
Sbjct: 38  HRHDKAQLLYCARGVINCEVEDGVWIVPPQCAIWIPGGLPHAAFGSGEVECICLFVAPDA 97

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
              +P TCCT+ IS L R L++  +        +    R++ V+ DEL + P +QL LP+
Sbjct: 98  AAGLPVTCCTIAISDLLRHLLIRASELPERYDVDGPDGRIVAVILDELAKAPVEQLCLPI 157

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
            S P+++ + E++   P +   + +WAG  A+SER+L+R+++ E G+SF  WR+QL +I+
Sbjct: 158 PSDPRLKQLAELLVSSPADHATVAEWAGRVALSERSLSRMLMDEIGMSFGHWRRQLHVIL 217

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY-IARLTTVSPQSAKPDPR 272
           AL+ L  G+TVQ VA  LGY+S ++F+TMF+K +G+ P RY + R T+V    + P P+
Sbjct: 218 ALRRLSAGETVQTVALDLGYESASSFVTMFRKMVGKPPIRYLVERQTSVPLSRSDPPPK 276


>UniRef50_A8I0S5 Transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571
           RepID=A8I0S5_AZOC5
          Length = 272

 Score =  199 bits (506), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 90/225 (40%), Positives = 140/225 (62%), Gaps = 1/225 (0%)

Query: 33  SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92
           SP H H+K QL+  + G I C VE+A+W+VPPQ AVWIPGGV H+   +   E   LFIE
Sbjct: 35  SPRHHHQKAQLLFTVRGVINCEVEDAVWIVPPQCAVWIPGGVPHTVFGSGEVECISLFIE 94

Query: 93  PSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151
           P A   +P  CCT+ +S L R L++           +    R++ V+FDEL   P + L 
Sbjct: 95  PPATPELPNACCTITVSSLLRHLLMRANELPELYDVDGPDGRIVSVIFDELAAAPVEDLR 154

Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211
           LP+    +++ + +++   P +   + +WA   A+SER+L R++ ++ G+SF +WR+QL 
Sbjct: 155 LPIPGDVRLKKLTDLLIAAPADHATVAEWASRIALSERSLNRMLAEQVGMSFGRWRRQLH 214

Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           +++AL+ L  G TVQ VA  LGY+S ++F+TMF+K +G+ P RY+
Sbjct: 215 VVLALRRLSAGQTVQAVAMDLGYESASSFVTMFRKMVGKPPSRYL 259


>UniRef50_B4SJK4 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria
           RepID=B4SJK4_STRM5
          Length = 282

 Score =  190 bits (482), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 103/262 (39%), Positives = 137/262 (52%), Gaps = 1/262 (0%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           PDR     +   +    D    P H HRK QL++A  G I       LW+VPPQ A+WIP
Sbjct: 16  PDRVDLPVMVLGLDPIPDAWQMPFHAHRKAQLLVATRGLIMLETAAGLWVVPPQGAIWIP 75

Query: 72  GGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130
           GG+ H    +       +F+EP  V  +PT C  + I+P  + L+   +           
Sbjct: 76  GGLSHRASSSGRPHGFVVFVEPGVVPGLPTHCAAMAITPFMQALLERASALPGHYEPGSA 135

Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190
             RL+ V  DEL   P + LHLP+ S  ++R +   M   P E   L  WA    MSERN
Sbjct: 136 QDRLMAVFLDELIAAPPEWLHLPMPSDARLRRLANAMLDTPAERATLEVWASRIGMSERN 195

Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250
           ++RL   ETGLS R+WR+QL +++AL  L KG TVQ VA  LGYDS  AF+TMF+K +G 
Sbjct: 196 MSRLFSGETGLSVRRWRRQLHVVVALPLLAKGRTVQAVADHLGYDSAGAFVTMFRKTVGA 255

Query: 251 TPGRYIARLTTVSPQSAKPDPR 272
            P R++A   T  P S   D R
Sbjct: 256 PPKRFLAERGTRQPVSDADDQR 277


>UniRef50_Q2NTH9 Putative transcriptional regulator n=1 Tax=Sodalis glossinidius
           str. 'morsitans' RepID=Q2NTH9_SODGM
          Length = 268

 Score =  189 bits (481), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 97/213 (45%), Positives = 130/213 (61%)

Query: 7   LNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQY 66
           L  YEPDR    A A  ++     + +P +QHRKGQLI+ALHG ITC + +AL MVPP  
Sbjct: 8   LTHYEPDRDRNLATAMRLNVVQSAMETPFYQHRKGQLIMALHGGITCELTDALLMVPPHC 67

Query: 67  AVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQR 126
           AVWIP    HSN  T NA  CF+F+EP    +    CTL ISPL ++LIL LA       
Sbjct: 68  AVWIPADTPHSNHATVNARFCFVFVEPIFPGLLARSCTLFISPLLQQLILHLAELPGDYA 127

Query: 127 AEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAM 186
            +  T RL  V+ ++L   P++ L LP SSHP+IR + + +   P E   L  WA    M
Sbjct: 128 LDLPTGRLAVVMLEQLANMPEENLSLPFSSHPRIRRITDTLNHSPAERRTLPAWASLVGM 187

Query: 187 SERNLARLIVKETGLSFRQWRQQLQLIMALQGL 219
           +ER+LARL +KETG++F   RQ+LQLI++++ L
Sbjct: 188 NERSLARLFIKETGMTFGCRRQRLQLIISIREL 220


>UniRef50_Q2BLH8 Transcriptional Regulator, AraC family protein n=1
           Tax=Neptuniibacter caesariensis RepID=Q2BLH8_9GAMM
          Length = 260

 Score =  167 bits (422), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 129/226 (57%), Gaps = 1/226 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H+H +GQL  A  G I    +  +W+VPP  AVW+PG V H      +AEL  LF++P+ 
Sbjct: 35  HRHPRGQLAYAAEGIIRVYTDEGVWVVPPSQAVWVPGDVVHRTTAEVSAELRHLFVDPAY 94

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           ++ +   C  +++SPL RELI+ +A+            RL  V+ DEL       LHLP 
Sbjct: 95  LSGLSDQCSVVEVSPLLRELIMRVADFGDDYSTNSPASRLCAVILDELQNLKPSLLHLPG 154

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
           ++  +++ ++  M + P     L  WA     SER ++RL VKETG++F+QWR+QL L  
Sbjct: 155 ATDRRLQRVMHAMVENPSAEIGLNYWAEQVGASERTISRLFVKETGMNFQQWRKQLLLQE 214

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260
           A+  L K + V  +A  LGY S +AF+ MF++ LG+ PG+Y   L+
Sbjct: 215 AVDRLGKRNAVVDIALELGYRSPSAFVAMFRQALGKPPGQYFKDLS 260


>UniRef50_A5GBQ3 Transcriptional regulator, AraC family n=2 Tax=Bacteria
           RepID=A5GBQ3_GEOUR
          Length = 278

 Score =  164 bits (414), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 124/225 (55%), Gaps = 1/225 (0%)

Query: 32  TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91
           ++ VH H +GQLI A  G +       +W+VPP  AVW+P   EH      +  L  LF+
Sbjct: 45  SAAVHVHPRGQLIYASSGMMRVICSRDVWVVPPSQAVWVPPNQEHEVYFPGDTALRSLFV 104

Query: 92  EPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150
           +PSAVT +P  C  LK++PL RELIL       +   +    R++QVL DEL       L
Sbjct: 105 DPSAVTGLPLQCTVLKVAPLLRELILRAVQIGNSYAPDGAEWRVMQVLLDELRIAEATPL 164

Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210
            LP++   ++  +++ + K P +   L  W      S R LARL V ETGL+F  WR++L
Sbjct: 165 RLPMARDERVMRVIDALLKSPGDNRGLDAWGKIAGASSRTLARLFVSETGLTFGGWRKRL 224

Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            L  AL  L +G+ V  +A  LGY S +AFI MF+K LG +P RY
Sbjct: 225 LLHKALDRLDRGEQVTGIAFDLGYQSLSAFIEMFRKELGVSPRRY 269


>UniRef50_B3QB90 Transcriptional regulator, AraC family n=3 Tax=Alphaproteobacteria
           RepID=B3QB90_RHOPT
          Length = 248

 Score =  152 bits (383), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 120/222 (54%), Gaps = 1/222 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H + QLI A+ G ++ T  +  W+VPP  AVW+P GVEH  +  +  +   L I+   
Sbjct: 25  HSHPQAQLIYAITGVVSVTTADGTWVVPPSRAVWVPAGVEHDTKSHSAVQFRSLLIDSVE 84

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           V  +P  C  ++++PL RELIL L           ++R + Q+L  EL   P + L LP 
Sbjct: 85  VMGLPVVCMAMEVTPLLRELILRLVAIADAPGRVELSRVVTQLLLMELASLPVEPLSLPT 144

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
             HP++    + +   P    +L Q A    MS  +  RL   ETG+SF +WRQQ +L+ 
Sbjct: 145 PRHPQLARFCDQIRGEPAASVSLEQAARALHMSRASFMRLFQHETGMSFLRWRQQARLLH 204

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           AL  L +G ++  VA   GYDS +AF  MF++ LG++P +Y 
Sbjct: 205 ALSLLAEGQSILNVALACGYDSPSAFSAMFRRVLGKSPSQYF 246


>UniRef50_D1SXH7 Transcriptional regulator, AraC family n=1 Tax=Acidovorax avenae
           subsp. avenae ATCC 19860 RepID=D1SXH7_9BURK
          Length = 269

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 80/224 (35%), Positives = 126/224 (56%), Gaps = 2/224 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE-PS 94
           H HR+GQLI    G ++   +   W++P ++A+W+P G  HS+++        L++  P+
Sbjct: 34  HSHRRGQLIGCRRGVLSVGADTGHWVIPARHAIWLPPGRPHSSRMHGPFTGWSLYVAGPA 93

Query: 95  AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
             ++P + CT+ +SPL  E  L  A R      +P+  RL  V+ DEL     + L LP+
Sbjct: 94  CQSLPDSPCTVAVSPLLWEAALRCAERANAL-PDPVQDRLAGVILDELRSMVPRPLGLPM 152

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
            S  ++  +   +   P    +L  WAG+ A+S R L+R  V ET LSF  W Q+++L+ 
Sbjct: 153 PSDARLLRIARGLLADPARRQSLQAWAGWAALSPRTLSRRFVAETSLSFTAWTQRVRLLR 212

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           +L+ L  G +V +VA  LGYDS +AFI +FK+ LG+TP  Y  R
Sbjct: 213 SLEWLADGQSVTQVALDLGYDSVSAFIALFKRELGRTPAAYFGR 256


>UniRef50_B0TZR0 Transcriptional regulator, AraC family n=1 Tax=Francisella
           philomiragia subsp. philomiragia ATCC 25017
           RepID=B0TZR0_FRAP2
          Length = 264

 Score =  150 bits (379), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 123/225 (54%), Gaps = 1/225 (0%)

Query: 33  SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92
           S  H H + QLIL   G I   VE  +W VP   A+WIP  V HSN +T   ++C  F++
Sbjct: 32  SEYHSHSEAQLILPTKGLIQSNVEAKIWAVPLGSALWIPSYVYHSNLITKGGQMCMTFVD 91

Query: 93  P-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151
               V MP   C L ISPL +ELIL L+ +T  ++     +++  VL D+L +      +
Sbjct: 92  KLMLVNMPKKACVLYISPLIKELILYLSQQTVLEQLNYENQKIASVLIDQLSKMLPTFYN 151

Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211
             + S   ++ +       P ++  +   A   ++S + LAR I K+ G++F  W++QL 
Sbjct: 152 FSLPSEKILQEVAFQWLSKPTKYKYISDMAYECSVSSKTLARKIKKDIGMNFSDWKKQLH 211

Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           +++ALQ L +G +V  V+  LGY+ST+ F+T FK+    +P RY+
Sbjct: 212 IVVALQKLYEGYSVNWVSEYLGYESTSTFVTFFKRIFKCSPKRYV 256


>UniRef50_B4SSQ8 Transcriptional regulator, AraC family n=3 Tax=Stenotrophomonas
           RepID=B4SSQ8_STRM5
          Length = 265

 Score =  148 bits (374), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 119/222 (53%), Gaps = 1/222 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS- 94
           H+HR+ QL+ A  G +    E   W+VP   A+W+P G+ H+    A   +  L++EP  
Sbjct: 43  HKHRRHQLVYAQSGLMVVRSEVGRWVVPSTRAIWVPAGIAHAVDCIAEVHMRSLYVEPEF 102

Query: 95  AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           A  +P     ++++PL REL+L  +        +    R++++L DEL +     LHLP 
Sbjct: 103 APHLPAEAFAIQVAPLLRELLLAASLIEGAHEDDSRDGRVVRLLLDELRRMDALPLHLPE 162

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
            S P++  +   + K P +   L  WA    +  + + R    E G++F QWRQQ +L+ 
Sbjct: 163 PSDPRLLKICLHIQKHPADDATLQDWAQALQVDVKTIQRHFTSELGMTFGQWRQQARLLA 222

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           A++ L  GD V  VA  +GYDS +AF +MFK+ LGQTP  + 
Sbjct: 223 AMERLAVGDKVIDVALAMGYDSPSAFTSMFKRQLGQTPAAFF 264


>UniRef50_B6JB31 Transcriptional regulator, AraC-family n=5 Tax=Proteobacteria
           RepID=B6JB31_OLICO
          Length = 300

 Score =  147 bits (371), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 123/247 (49%), Gaps = 1/247 (0%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
           E  +H    VA       D+   P+H H + QLI    G IT T  N  W+VP   AVW+
Sbjct: 43  EDYQHTSRVVAAMARDLPDKFVIPMHSHFRSQLIFGCSGVITVTTVNGTWVVPSLRAVWV 102

Query: 71  PGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEP 129
           PGGVEH  + T + E+  ++++P A + +P  CC + +SPL RELI+             
Sbjct: 103 PGGVEHEMRTTGSVEMRTIYVDPEAASHLPRECCVVAVSPLLRELIVAAVRIPNDFSDGS 162

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
              +++ ++  E+   P   L LP+    ++  + + +   P     L ++      S+R
Sbjct: 163 REEKIMSLILTEIHPDPVLPLDLPMPQDRRLLRVCQAILTDPGSNSTLAEFGQTVGASQR 222

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
            L R+   ETG +F +WRQQ +L   ++ L +G  +  +A  LGY+S +AF  MF++ LG
Sbjct: 223 TLERMFPVETGTTFSKWRQQARLQCGIRMLAEGTPISTIALDLGYESPSAFSLMFRRALG 282

Query: 250 QTPGRYI 256
             P  Y 
Sbjct: 283 VAPSEYF 289


>UniRef50_D0J513 Pyridoxamine 5'-phosphate oxidase-related protein n=2 Tax=Comamonas
           testosteroni RepID=D0J513_COMTE
          Length = 265

 Score =  147 bits (370), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 133/236 (56%), Gaps = 3/236 (1%)

Query: 30  ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89
           EL+S +HQH +GQL  ++ G I+  V+  LW+VP  +AVW+P    H+ +          
Sbjct: 30  ELSSEMHQHARGQLFGSIKGLISVQVDGGLWVVPAIHAVWLPPHHAHAGRSFGPYHGWSA 89

Query: 90  FI-EPSAVTMPTTCCTLKISPLCRELILTLANRT--TTQRAEPMTRRLIQVLFDELPQQP 146
           ++ E +   +P   C +++S L RE +L +A+     + ++      +  V+ DE+   P
Sbjct: 90  YVAEAACANLPAQPCIIRVSGLLREAVLRIASSMPQASDQSSQAQSHICAVVLDEIRSLP 149

Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206
            ++  LP+ +  +++ + + +   P +   +  WA F A+S R L+R  V ETG +F  W
Sbjct: 150 VEEFGLPIPADARLQRIAKALIANPADERNIDDWASFGAISSRTLSRRFVSETGFNFTAW 209

Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262
           RQ+++L+ +L+ L +G ++  +A  LGY S +A+I++F++  G+TP  Y +RL  V
Sbjct: 210 RQRVRLLRSLEMLAEGISITAIALDLGYASISAYISLFRRTFGETPACYRSRLKAV 265


>UniRef50_Q2F9R4 AraC-type DNA-binding domain-containing protein n=2
           Tax=Vibrionaceae RepID=Q2F9R4_9VIBR
          Length = 265

 Score =  146 bits (369), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 77/222 (34%), Positives = 121/222 (54%), Gaps = 1/222 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H HR  QL+ A  G +    E+ LW+VPPQ AVWIP    H   +  +A +  +++ PS 
Sbjct: 42  HCHRHNQLVYASSGVMAVETESKLWIVPPQRAVWIPAHESHKIHMYGDAAMKNVYLLPSI 101

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
            T +P     L +SP+ RE+I+ L+ +   Q +     R++QVL D+L   PQ  + +P+
Sbjct: 102 DTELPNQSDVLNVSPMLREMIIHLSEQPVVQASTDSYWRIVQVLLDQLKVAPQASIQVPL 161

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
            +  K+  +   +   P +  +L QWA    +S R L+RL   E G+SF ++RQQ++L  
Sbjct: 162 PNDAKLGLVCNSLLDKPADNRSLKQWAEEINVSSRTLSRLFRNEVGMSFIEYRQQVRLFH 221

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           +L  L +   V  VA   G+ S +AF  +FK+  G TPGR+ 
Sbjct: 222 SLTLLAQTHPVTTVALECGFTSVSAFNHLFKQSFGVTPGRFF 263


>UniRef50_B0UH11 Transcriptional regulator, AraC family n=3 Tax=Rhizobiales
           RepID=B0UH11_METS4
          Length = 287

 Score =  146 bits (368), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 128/249 (51%), Gaps = 5/249 (2%)

Query: 10  YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69
           YE  RH   A+     +G      P H H++ QLI A  G +  T  + LW++PPQ AVW
Sbjct: 23  YEASRHGIVAMPKEFPSG---FHVPSHVHKRAQLIYATAGVMEVTTADGLWLLPPQRAVW 79

Query: 70  IPGGVEHSNQVTANAELCFLFI--EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRA 127
           +P G+ H+ +   +  L  L+I  E    + P T  ++++S L RELIL +A     +  
Sbjct: 80  MPAGIAHAMRARCDVSLRTLYIAQEACPASFPETPRSVRVSVLLRELILRVARMPLEREP 139

Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187
               RR++ +L  E+  +    L+LP+    ++  + + +   P +   LG WA     S
Sbjct: 140 TEHERRVLDLLLYEITWEADGVLYLPMPKDKRLAGLCQALIDDPGDGRDLGDWARQAGAS 199

Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247
            R LARL  +E G SF  WR+QL+ + AL  L  G+ +  VA  LGY++  AF  MF+  
Sbjct: 200 SRTLARLFKREFGSSFLVWRKQLRALCALPRLAAGEPISVVAIDLGYETPGAFAAMFRGV 259

Query: 248 LGQTPGRYI 256
           +G+ P RY 
Sbjct: 260 MGERPSRYF 268


>UniRef50_Q4ZYQ3 Helix-turn-helix, AraC type:Arac protein,
           arabinose-binding/dimerisation n=22 Tax=Proteobacteria
           RepID=Q4ZYQ3_PSEU2
          Length = 267

 Score =  145 bits (365), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 117/223 (52%), Gaps = 2/223 (0%)

Query: 33  SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92
           +P H+H   Q   A+ G +        +  PPQ+ VW+P G+EH    +  AE+  L+I 
Sbjct: 41  TPPHRHDWVQFSYAISGVLGVHTAEGSFFAPPQWGVWVPAGLEHEVVTSMRAEMRSLYIR 100

Query: 93  PS-AVTMPTTCCTLKISPLCRELILTLANRTTTQ-RAEPMTRRLIQVLFDELPQQPQQQL 150
            + +   P  C  L+++PL RELI +           +    RL+QVL D+L Q P+   
Sbjct: 101 TADSGWAPQRCRVLEVTPLARELIKSFCLLPVDYPEQDSHEARLVQVLLDQLAQLPEVGF 160

Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210
            LP+  HP++  +   + + P     L  WA     SE+ L RL  +ETGLSFR WRQ+ 
Sbjct: 161 SLPLPRHPRLLGLCNELIEEPGRLITLHDWAARLGTSEKTLMRLFQRETGLSFRGWRQRA 220

Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253
           +L+ +L  L +G +V + A   GYDST+AFI  FK   G TPG
Sbjct: 221 RLLSSLSALEEGASVTRTALACGYDSTSAFIAAFKGLFGHTPG 263


>UniRef50_A1TK09 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria
           RepID=A1TK09_ACIAC
          Length = 276

 Score =  144 bits (362), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 119/229 (51%), Gaps = 5/229 (2%)

Query: 34  PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93
           P  QH  GQ +    G I  TV++  +  PP + VW+P G EH  +  A+ E  +  ++ 
Sbjct: 43  PTEQHPWGQFVYPRAGVIELTVKSNRYAAPPDFGVWLPPGTEHVAR--ADGETSYFVLDI 100

Query: 94  SA---VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150
            A     +P     L +S + + + L L  R   +   P   RL++VL D+L        
Sbjct: 101 DADLCARLPRRASVLSVSAIAKAVFLDLQKRQVRKPQSPEDVRLMEVLIDQLSASVPVDS 160

Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210
            LP+SS   +R ++E + K P +   L +WA +   +ER LAR   ++ G++F +WRQ+L
Sbjct: 161 FLPMSSDAALRNVLEALCKNPGDSRTLVEWARYVHSTERTLARRCTRDLGMTFLEWRQRL 220

Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
           +L  A   L  G  VQ VA  LGY +T+AFI MF+K +G TP  +  RL
Sbjct: 221 RLSRAFAMLADGLAVQVVAQQLGYGTTSAFIAMFQKTIGTTPNTFRGRL 269


>UniRef50_A5FCF5 Transcriptional regulator, AraC family n=1 Tax=Flavobacterium
           johnsoniae UW101 RepID=A5FCF5_FLAJ1
          Length = 272

 Score =  142 bits (359), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 124/224 (55%), Gaps = 5/224 (2%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF--LFIEP 93
           H H + QLI A  G +   V N +W+V P   +WIP GVEH  QVT   ++ +  +FI+P
Sbjct: 39  HSHPRAQLIYATRGVMNVVVGNNIWVVNPLQGLWIPSGVEH--QVTFQKDVNYYSVFIDP 96

Query: 94  SAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152
           SA+  +P    +  I    ++L+  + +  T+        R+I V  DEL         L
Sbjct: 97  SAIGGLPEKSFSFDIPMFLKQLVFKIISFGTSGNLTESQLRIIYVFLDELALIVPSATFL 156

Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212
           P ++  +++ +VE++         +  +A    MS R L+RL +KE G++F  WR +++L
Sbjct: 157 PTTNDERLQKVVELLMSDVSSKQTIDYYAELSFMSSRTLSRLFIKELGMNFSDWRTRMKL 216

Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           + A++ L +  +++++A  LGY++ +AFI MFKK LG+TP  YI
Sbjct: 217 LEAIKRLGEKQSIKEIALDLGYETASAFIYMFKKHLGKTPSNYI 260


>UniRef50_Q4K6D5 Transcriptional regulator, AraC family n=8 Tax=Pseudomonas
           RepID=Q4K6D5_PSEF5
          Length = 272

 Score =  142 bits (359), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 130/258 (50%), Gaps = 7/258 (2%)

Query: 13  DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72
           D  H   V+       D    P+H+HR+ Q + A  G +        W++PP  AVWIP 
Sbjct: 19  DHFHHGPVSAYPRDYPDAAHQPLHRHREAQFLYAACGTMRLVTAQGAWVIPPSRAVWIPP 78

Query: 73  GVEHSNQVTANAELCFLFIEPSAVTMPT--TCCTLKISPLCRELILTLANRTTTQRAEPM 130
            VEH   +     +  LFI+P  ++ P    CC L ++PL RELIL  A +   Q   P+
Sbjct: 79  LVEHEIFMVGEVRMRSLFIDPE-LSAPALRQCCVLAVTPLLRELILR-AVQGPEQAENPL 136

Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190
            +   Q++ +E+       LH+P+    +++ +   + + P     L  WA     S R 
Sbjct: 137 IQ---QLMLEEIAALENLPLHIPMPQDRRLQAICRTLIQTPDHPHTLEDWAQQVGASSRT 193

Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250
           LARL  ++  ++F  WRQQ++L+ AL  L+ G++V  VA +LGY S  AF  MF + LG 
Sbjct: 194 LARLFQQQVQMNFNAWRQQVRLMEALPRLLAGESVHNVADSLGYGSARAFSAMFCRLLGD 253

Query: 251 TPGRYIARLTTVSPQSAK 268
           TP  Y+A L  +S  +A 
Sbjct: 254 TPRHYVAALNQLSAINAS 271


>UniRef50_D0B292 Transcriptional regulator n=40 Tax=Rhizobiales RepID=D0B292_BRUME
          Length = 289

 Score =  142 bits (358), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 119/232 (51%), Gaps = 1/232 (0%)

Query: 29  DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88
           D    P H H + QL+ A  G +  T +   WM+P  +A+WIP GVEHS  +  +  +  
Sbjct: 44  DGYFVPRHSHSRAQLLCASQGVVLVTTDAGRWMIPSDHAMWIPAGVEHSVAILGDVFMRS 103

Query: 89  LFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147
           ++I   A++ +P     + ++ L R LI+   +  +    E     +I+++  +L   P+
Sbjct: 104 IYISVDAISGVPNYLHVVGLTDLMRCLIIDATSHDSIPAPESRDGLVIELILRDLHTLPE 163

Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207
             L LP  S P+++ +     K P     + +WA   AMS R+  R   +ETG+S   WR
Sbjct: 164 YPLGLPFPSDPRLQKLCRDFVKKPSSRATIDEWADRMAMSRRSFTRHFQRETGVSLSVWR 223

Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
           QQ  L  A+  L +G+ V  VA  LGYDS +AF TMF++ LG  P  Y  RL
Sbjct: 224 QQACLFAAVPRLSEGEPVTSVALDLGYDSVSAFTTMFRRMLGVPPKFYQPRL 275


>UniRef50_Q7D3B7 Transcriptional regulator. AraC family n=2 Tax=Agrobacterium
           tumefaciens RepID=Q7D3B7_AGRT5
          Length = 264

 Score =  142 bits (358), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 115/208 (55%), Gaps = 1/208 (0%)

Query: 46  ALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCT 104
           AL G +   VE   ++ PP YA WIP    H+     N +   ++I+      MP T CT
Sbjct: 40  ALTGVMEARVEGKRFLCPPHYATWIPADAVHACHNRENVKFVSIYIDRDLCAGMPETACT 99

Query: 105 LKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMV 164
           L +SPL + ++   A R  T       RRL  VL D+L   P+++  LPVS+   ++ ++
Sbjct: 100 LALSPLIKAILADFAERRITVPQTEADRRLAFVLVDQLLNAPRRESFLPVSNDDLLQPVI 159

Query: 165 EMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDT 224
           + +   P +  +L +WA     +E+ L+R  +   G+SF +WRQ+L+L+ +L  +  G +
Sbjct: 160 DALQADPGDRRSLSEWARLLQTTEKTLSRRFLGHLGVSFNEWRQRLKLVASLSLIEDGKS 219

Query: 225 VQKVAHTLGYDSTTAFITMFKKGLGQTP 252
           VQ +A TLGY+S +AFI MF++  G +P
Sbjct: 220 VQSIAKTLGYNSPSAFIAMFRRLTGTSP 247


>UniRef50_A0AX10 Transcriptional regulator, AraC family n=6 Tax=Burkholderia
           RepID=A0AX10_BURCH
          Length = 277

 Score =  142 bits (357), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 1/229 (0%)

Query: 31  LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLF 90
           +  P H HR+GQLI A+ G +    +   W+VP   AVW+PGG +H  +   + ++  +F
Sbjct: 48  MAYPPHSHRQGQLIHAISGVMIVHADAGSWVVPTGRAVWVPGGTQHEIRSAGDVQMRTVF 107

Query: 91  IEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ 149
           + P    ++PT C  +++  L RELI+T  +            R++ ++ DE+   P   
Sbjct: 108 VGPEVRPSLPTECRVIEVGTLLRELIVTACDLPADYDLSHRAGRVLALILDEIEIAPSLS 167

Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209
           LH+P+  HP +  +   +   P     L  WA    M+ER LAR   +ETG++   W + 
Sbjct: 168 LHVPMPRHPALVALCTRLINDPSSVVTLQAWARDAHMNERTLARAFKRETGMTHGAWCRH 227

Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
            +L+++L  L  G  + ++A   GYDS +AF  MF+K LG  P  Y  R
Sbjct: 228 ARLLLSLPRLAAGTPILELALEHGYDSPSAFAAMFRKALGVAPSEYFRR 276


>UniRef50_C1DH76 Transcriptional regulator, AraC-family n=3 Tax=Proteobacteria
           RepID=C1DH76_AZOVD
          Length = 296

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 112/223 (50%), Gaps = 1/223 (0%)

Query: 34  PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93
           P H HR+GQL+    G +        W +PP  A W+P G+ H  +    AEL   ++  
Sbjct: 51  PEHSHRRGQLMFVTSGGLRVQTRRGYWTIPPGRACWVPCGLNHIAEYPQAAELAVAYVRT 110

Query: 94  SAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152
               M P+ C  L +  L REL++   +       +    R + VL  E+ +Q    L +
Sbjct: 111 DLCEMLPSDCRVLNLGALLRELVIAAYDFGWDYGIDSHEARAMLVLIGEIGRQSSAPLFI 170

Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212
           P     ++R +   + + P +  +L +WA     S R LARL   ETGLSF QWRQQL L
Sbjct: 171 PEGRDNRLRRVTAFLHRHPDDKRSLEEWASQVGASARTLARLFRSETGLSFSQWRQQLHL 230

Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
             A++ L++G +V +VA+ LGY S  +F  MF + +G+ P  Y
Sbjct: 231 TRAVEMLLEGASVTQVAYALGYASPGSFSAMFARSMGEPPSLY 273


>UniRef50_Q2SP75 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella
           chejuensis KCTC 2396 RepID=Q2SP75_HAHCH
          Length = 275

 Score =  141 bits (356), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 126/251 (50%), Gaps = 3/251 (1%)

Query: 10  YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69
           Y P R     VA      +    +P H+H   QLI A  G +    +  +W++PPQ AVW
Sbjct: 22  YMPIRGERPIVARAREFPSGYRVTP-HKHECCQLIFATSGVMELVTDEGIWLIPPQRAVW 80

Query: 70  IPGGVEHSNQVTANAELCFLFIEPSA--VTMPTTCCTLKISPLCRELILTLANRTTTQRA 127
           +P  VEH  +   +  L  ++I+P A  V+ P    TL+ISPL RELI+      +    
Sbjct: 81  MPPNVEHGMRARGDVSLRTMYIQPHACPVSFPQKPRTLQISPLLRELIIRAMRVPSNYDE 140

Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187
                R++ ++ +E+    ++ L LP +   +++ +   +   P +   L  W+     S
Sbjct: 141 GGRDGRIMSLILEEIEWSGERPLRLPATRDSRLQNLCRAILANPADPRELKDWSTVIGAS 200

Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247
           ER L+RL   E G+S++ WRQQ+  + A+  L  GD V  +A  LGY++ +AF  MF++ 
Sbjct: 201 ERTLSRLFRNELGVSYQYWRQQVAALNAIPRLAAGDPVTLIAADLGYETPSAFSAMFRRI 260

Query: 248 LGQTPGRYIAR 258
           +G  P  Y  R
Sbjct: 261 MGVAPSLYFQR 271


>UniRef50_Q7W072 Probable transcriptional regulator n=3 Tax=Bordetella
           RepID=Q7W072_BORPE
          Length = 286

 Score =  140 bits (354), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 125/240 (52%), Gaps = 4/240 (1%)

Query: 18  AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77
           AA+A    AGT    S +H+H +GQL+ A+ G +T   +   W+V P  A+WI  GV H 
Sbjct: 40  AALATDYPAGT---VSSLHRHDRGQLLYAMSGVVTVITDLGSWVVAPGQALWIAPGVLHQ 96

Query: 78  NQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136
            +   +  +  L+I+P+ A  +P  C T+++SPL + LIL                 +  
Sbjct: 97  TRGFESVAIRSLYIDPAHADGLPAACQTIQVSPLLQALILEAVKLPPQDAGSERAGHIRA 156

Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196
           ++ DE+       L++P+    ++  + + + + P   G+L  WA +  +S RNL RL  
Sbjct: 157 LILDEMRHVCAAPLYVPMPRDARLARICQALLRDPANAGSLDAWAAYGGLSRRNLTRLFR 216

Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
            +TG SF  WRQ++ L+ AL  L +G+ +  VA  LGY S  AF  MF++ LG +P  Y 
Sbjct: 217 AQTGASFNAWRQKVLLMEALARLSRGEQITAVALDLGYGSPGAFTAMFRRALGVSPREYF 276


>UniRef50_D1XHM7 Transcriptional regulator, AraC family n=1 Tax=Streptomyces sp.
           ACTE RepID=D1XHM7_9ACTO
          Length = 271

 Score =  140 bits (353), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 83/233 (35%), Positives = 122/233 (52%), Gaps = 10/233 (4%)

Query: 27  GTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL 86
           G DE T P H+H +G L+    G ++       W+ P    VWIP G EH ++     ++
Sbjct: 24  GHDERT-PEHKHTRGHLVYPATGVLSLVTSVGSWIAPSNRVVWIPAGFEHRHRAHGRTDM 82

Query: 87  CFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
             +F+ PS A  +P     L ++PL RE  LTL      +R      RL +V+ D++   
Sbjct: 83  RIVFMAPSLAALLPAHPAVLVMTPLAREATLTLTG--AERRPAGARSRLRRVIIDDITTA 140

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKG---PVEWGALGQWAGFFAMSERNLARLIVKETGLS 202
           P+Q LHLP     ++R +V ++ +G   P+  G LG   G     ER L+RL  +ETG+S
Sbjct: 141 PEQPLHLPEPRDDRLRAVVALVEEGMSDPLTLGRLGHEVG---AGERTLSRLFQRETGMS 197

Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           F QWR QL++  AL  L  G +V   A   G+ + +AFI  F   +GQTPG+Y
Sbjct: 198 FPQWRTQLRVHHALLLLADGGSVINTATACGWANPSAFIDAFTALVGQTPGQY 250


>UniRef50_B7UVC2 Probable transcriptional regulator n=6 Tax=Pseudomonas aeruginosa
           RepID=B7UVC2_PSEA8
          Length = 260

 Score =  140 bits (353), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 81/219 (36%), Positives = 127/219 (57%), Gaps = 3/219 (1%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
           +H+H  GQL+ A  G +  + E   ++VP Q A+WIP  V H+ +         L+++ S
Sbjct: 35  MHEHPWGQLMYAASGTLRASTERHSYLVPAQRALWIPPRVRHAAEACNPVLFRSLYLDRS 94

Query: 95  AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
              +P  C  L++S L REL+L  A             RL+QV+ DE+ +  +  L+LP+
Sbjct: 95  ---LPGGCRVLEVSGLLRELLLRAAEFPREYPPGGEAERLMQVVADEVGRLREAPLNLPL 151

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
              P++R + + +   P +   +  WAG    S R LARL  ++T LSFR+WRQ+L+L+ 
Sbjct: 152 PGDPRLRRITDALQADPADPRGISDWAGLVGASRRTLARLFREQTQLSFREWRQRLRLLN 211

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253
           A+  L +G +V +VA  LGYDST+AFI++F++  GQTPG
Sbjct: 212 AVAALEEGASVTRVASDLGYDSTSAFISLFQRHFGQTPG 250


>UniRef50_Q39NN6 Transcriptional regulator, AraC family n=9 Tax=Betaproteobacteria
           RepID=Q39NN6_BURS3
          Length = 266

 Score =  140 bits (353), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 125/223 (56%), Gaps = 1/223 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H+HR+ QL+ A+ G +    E A W+VPP   VW+  G++H+ Q++ + ++  +F+EP A
Sbjct: 44  HRHRRAQLLYAIEGVMHVQSEGASWVVPPTRGVWLEAGLDHTVQMSGDVQMRTVFVEPGA 103

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           V  +P   C +++ PL RELIL   +             L+ +L  E+   P   L+LP 
Sbjct: 104 VEHLPARSCVVEVHPLLRELILAAVDVPLDYAPGSRHDHLMHLLLAEVTVAPLLPLYLPW 163

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
              P++RT+ + +   P +   + +WA    +S R L R   +ETGLSFR+WR+Q +L++
Sbjct: 164 PHDPRLRTICDALVAAPDDLRTIAEWADLLGLSVRTLHRAFRRETGLSFRRWREQARLLL 223

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           AL+ L  G+ V  VA   GY S +AF  MFK+  G +P  + A
Sbjct: 224 ALKRLAHGEKVLTVAMDHGYSSQSAFSAMFKRHFGVSPSAFYA 266


>UniRef50_A0NPK3 Probable transcriptional regulator protein, AraC family protein n=2
           Tax=Rhodobacteraceae RepID=A0NPK3_9RHOB
          Length = 262

 Score =  140 bits (352), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 117/222 (52%), Gaps = 1/222 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H   QL   + G+I    E   + VPP+ AVW+P  V H  +   + EL +++++   
Sbjct: 35  HSHDAAQLFHVIRGSIAIDTEMGTYFVPPERAVWLPPRVSHQTRYLTDTELRYIYVQYDY 94

Query: 96  V-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
              +P T   ++++ L R LIL   +   ++  +    R+  V+ D+L   P   L LP+
Sbjct: 95  TRDLPKTPQVMQVTTLLRALILEFMSYPRSETDKGPAARIAAVILDQLKMLPVAPLQLPM 154

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
               ++R + E + + P    +L + A   A S R+  R I  ETGLS+R W +Q++L  
Sbjct: 155 PQDARLRDLCEGVVRCPAHIPSLSEAADRCATSVRSFERRIKAETGLSYRTWCRQVKLFR 214

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           AL+ L  G +V  V+H LGY+  +AF++ FKK  G TPGRY 
Sbjct: 215 ALELLASGRSVSDVSHKLGYEGPSAFVSTFKKAFGVTPGRYF 256


>UniRef50_B3RAF2 Putative Transcriptional Regulator, AraC family n=1 Tax=Cupriavidus
           taiwanensis RepID=B3RAF2_CUPTR
          Length = 265

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 117/219 (53%), Gaps = 1/219 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H+H   Q   AL G +    +   ++ PPQ+AVWIP GV H  +      +  L+++ S 
Sbjct: 34  HRHPWCQFAYALQGVLEVWTDRGRFVAPPQWAVWIPAGVAHRVRCATGTRIRSLYLDNSV 93

Query: 96  VTMPTTCC-TLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
                + C  L +SPL RELI   ++            RL +VL D+L   P+ +  LP+
Sbjct: 94  CAAARSRCRVLTVSPLLRELIRAFSHLPAEYDERGADGRLARVLLDQLGAAPEVEFMLPL 153

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
            + P++R +   + +      +L  W+   A+S + L RL V+ETGL+FR WRQ+L+L+ 
Sbjct: 154 PADPRVRLVCNGLQRHADRDTSLAAWSMRLAISGKTLTRLFVRETGLTFRAWRQRLRLLD 213

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253
           A+  L +G+ V +VA   GY+S +AFI  F++    TPG
Sbjct: 214 AVPRLERGEAVTEVALDCGYESLSAFIAAFRRLYNMTPG 252


>UniRef50_Q39GD4 Transcriptional regulator, AraC family n=7 Tax=Betaproteobacteria
           RepID=Q39GD4_BURS3
          Length = 278

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 112/224 (50%), Gaps = 1/224 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H +GQ+     G       +  W++PP  A WIP G +H   ++       + I P+A
Sbjct: 51  HSHLRGQVFCVESGFAHVRTPHGSWLLPPHRAGWIPPGEQHKVSISGALSGWSVVIAPAA 110

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
              MP   C + I+ L R L+    +     R +    R+  VL DE+ + P + LHLP+
Sbjct: 111 SRRMPDQPCVIAITELMRALVRRAVSWADQDRLDIEQARISIVLLDEMRRAPHEPLHLPM 170

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
               ++  +   +   P +   L  WA +  +S R L+RL V ETG SF QWRQQ +L  
Sbjct: 171 PRDRRLLRIANAILGQPHDSRTLEAWAEWAGLSARTLSRLFVAETGTSFAQWRQQARLTH 230

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           AL+ L  GD+V  +A  LGY + + FI MF++  G +P  Y A+
Sbjct: 231 ALERLASGDSVANIADALGYATPSNFIAMFRRAFGDSPAHYFAK 274


>UniRef50_Q2K0F2 Probable transcriptional regulator protein, AraC family n=6
           Tax=Rhizobium etli RepID=Q2K0F2_RHIEC
          Length = 278

 Score =  139 bits (349), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 114/227 (50%), Gaps = 3/227 (1%)

Query: 32  TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91
           T   H H + QL   + G++    E   ++VPP+ AV++P GV H        E  +LF 
Sbjct: 36  TYSFHAHHRAQLFQIVRGSLRLETERGYFIVPPERAVFVPSGVLHEVTYLQETERSYLFF 95

Query: 92  EPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150
            P AV  +P+    +  +PL RE IL                RL+ V+ D+L   P   L
Sbjct: 96  RPDAVVNLPSQVSVIGTTPLLRETILAFLEIPRADAGSARAERLVAVILDQLQTSPVAPL 155

Query: 151 HLPVSSHPKIRTMVEMMAKGP-VEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209
            LP  +  ++R++   +   P  +W  L + A   AMS R+  R    ETG+SFR WRQQ
Sbjct: 156 SLPSPASERLRSIASDIRNEPGADW-PLDELASRAAMSPRSFQRHFHTETGMSFRAWRQQ 214

Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
            +L+ A++ L  G +V  +A +LGY   +AFI +F+   G +PG+Y 
Sbjct: 215 AKLLKAVEWLAAGRSVGDIAFSLGYSGPSAFIAVFRTAFGVSPGQYF 261


>UniRef50_Q13ID0 Transcriptional regulator, AraC family n=1 Tax=Burkholderia
           xenovorans LB400 RepID=Q13ID0_BURXL
          Length = 263

 Score =  138 bits (348), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 3/223 (1%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H+H   QL   L G++  T E  +W V    AVWIP GV+H   +    E   +FI+P  
Sbjct: 36  HRHNWSQLTCPLKGSMRVTTERQVWTVTSFRAVWIPPGVDHELTMVGATEFHAVFIDPQH 95

Query: 96  VTMPTT-CCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
             +P   CC + +SPL REL+  L        A   +RRL  VL +E+ +  ++   L +
Sbjct: 96  SPLPANQCCVVDVSPLMRELMQWLG--ADYGPATDHSRRLTDVLLEEVRRATRRTSALVL 153

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
               +++++ E + + P     LG+WA     SER LARL   E G +F  WRQQL+L  
Sbjct: 154 PGDRRLKSLCEALMEDPGSTLTLGEWAHRTGASERTLARLFQIELGTTFGAWRQQLRLSC 213

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           A+  L  G ++ ++A  LGY  + AF TMFK+  G  P RY A
Sbjct: 214 AVDLLRSGLSLSRIAADLGYADSAAFSTMFKRAFGVAPSRYHA 256


>UniRef50_D0J7G0 Transcriptional regulator, AraC family n=11 Tax=Proteobacteria
           RepID=D0J7G0_COMTE
          Length = 274

 Score =  138 bits (347), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 120/224 (53%), Gaps = 1/224 (0%)

Query: 33  SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92
           +P H HR G L  A HG+++  V     + PPQ+ VWIP GV HS  +    +   +++ 
Sbjct: 42  APPHSHRWGHLNYAAHGSLSMDVPTGHILCPPQHGVWIPPGVVHSCYLQHAVQYRSVYLA 101

Query: 93  PS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151
           P     +P T   +++ P+ + ++     R           RL +V+ D+L   P +   
Sbjct: 102 PDLCADLPQTAGCMRLGPIVKAVLADFGARGVQIPVTDADLRLARVVHDQLRATPLELSF 161

Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211
           LPV+ HP +  +++ M   P +  +L +WA    M+ER LAR   +E G+S  +WRQ+++
Sbjct: 162 LPVARHPALVQVLDAMQSRPDDHRSLAEWAETVHMTERTLARHCQRELGMSLGEWRQRMR 221

Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            + A+  L  G TVQ++A+ LGY + +AFI MF++  G  P ++
Sbjct: 222 YLQAIDALEAGHTVQQIAYDLGYSTPSAFIAMFQRESGLPPEQF 265


>UniRef50_A7K1S8 Transcriptional regulator AraC family protein n=4 Tax=Vibrionaceae
           RepID=A7K1S8_VIBSE
          Length = 264

 Score =  138 bits (347), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 116/223 (52%), Gaps = 1/223 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE-LCFLFIEPS 94
           H H +GQL+    G I    +   W++PP  A WIP G  HS     + +    LF   S
Sbjct: 38  HSHHRGQLLCIDEGLIQVKTDEGAWILPPHRAGWIPPGAMHSVYFCGSLKGRSLLFTPES 97

Query: 95  AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
               P   C +++S + + L +  +  + T      + R++ V+ DE+   P + LH+P+
Sbjct: 98  CERFPMRPCVIQMSDVLKALSVRASIWSKTDELSIQSLRILAVISDEIVNSPHESLHIPL 157

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
              P+++ + + +   P    ++  WA   A+S R L RLI  E  +SF +WRQQ  LI 
Sbjct: 158 PRDPRLQKVTQAILIDPNSKHSVEHWAKIGAVSSRTLRRLIRSELNMSFSEWRQQALLIH 217

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           +L+ + +G++V  VAH LGY + + FI MF++  G +P RY +
Sbjct: 218 SLEMMARGESVGAVAHALGYSTPSNFIAMFRRVYGDSPTRYFS 260


>UniRef50_A4WDQ0 Transcriptional regulator, AraC family n=18 Tax=Gammaproteobacteria
           RepID=A4WDQ0_ENT38
          Length = 254

 Score =  137 bits (346), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 121/227 (53%), Gaps = 3/227 (1%)

Query: 32  TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91
           + P HQH   QL+ +L G +        W+VPP   VW+P G +H+ ++T N     LFI
Sbjct: 26  SEPYHQHDCAQLLHSLSGVVRVDTVAGCWVVPPGRGVWLPAGTQHAIRITGNVAARTLFI 85

Query: 92  EPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150
           +P A   +P +C  ++ISPL RELI+   +   +        R+ +++ DE+   P    
Sbjct: 86  DPLARADLPASCQIVQISPLLRELIVASLDLPESYSPGSRDERVYELILDEIRTMPVLPF 145

Query: 151 HLPVSSHPKIRTMVEMMAKGP-VEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209
           HLP      +  + + + + P + W +  Q A   +MSER L R   ++TGLS+ +W ++
Sbjct: 146 HLPEPQSEPLHQLCQQIRQDPGLAWSS-AQAASLTSMSERTLNRHFQQQTGLSYGEWTRR 204

Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
            +L+ AL  L +G  V +VA  LGY S +AF  MF++ +G +P  Y 
Sbjct: 205 ARLVEALLRLAQGQPVLRVALDLGYGSHSAFTAMFRRVMGISPSDYF 251


>UniRef50_Q11DK3 Transcriptional regulator, AraC family n=1 Tax=Chelativorans sp.
           BNC1 RepID=Q11DK3_MESSB
          Length = 262

 Score =  137 bits (346), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 119/236 (50%), Gaps = 1/236 (0%)

Query: 33  SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92
            P H H + QL  +L G  +   E A +++PP  A+WIP GV H      N     ++I+
Sbjct: 27  DPFHSHERAQLSFSLSGVQSLITETATYVLPPNRAIWIPPGVRHKTHCRENVRFYAVYID 86

Query: 93  PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152
           P+   +P  C   ++S L R LI  +              +++++L DE+P+ P   + +
Sbjct: 87  PTLDNLPKECRVFEVSDLVRALIGEIMTFNFAYNEFGREGQIVRLLLDEIPRMPTVDIQI 146

Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212
           P+ +  +I  +  M+ + P +   +  WA    M  R   R+  K+TG++   WR Q++L
Sbjct: 147 PMPTDSRILRVCNMLIEQPGDAHDIDYWASVANMGRRTFTRVFKKQTGMALSTWRLQVRL 206

Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY-IARLTTVSPQSA 267
           + AL  L  G ++  VA+ +GY+S +AF ++F +  G  P  Y   ++T ++ + A
Sbjct: 207 MHALSLLHAGHSITSVAYGIGYESISAFTSVFHRSFGFPPSHYRTGKVTKMTAEKA 262


>UniRef50_Q8L1B2 Transcriptional factor PhcT (Fragment) n=1 Tax=Comamonas
           testosteroni RepID=Q8L1B2_COMTE
          Length = 246

 Score =  137 bits (346), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 1/212 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H KGQL+ A  G +    +   W+VPP  A+WI  G+ H+  +  +  +   +I+ + 
Sbjct: 35  HSHPKGQLLYATEGVMVVHTDAGSWIVPPNRALWITTGLRHTVTMAGDVLMRTAYIDAAK 94

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           VT +P     + +SPL REL++           +    RL+++L DE+       LHLP+
Sbjct: 95  VTTLPHESSVINVSPLLRELLVEAVRIAFHTEPKGRDARLLELLIDEIRVSTTLPLHLPM 154

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
               ++R++ + ++  P +     +WA    + ER L RL  KETG++F QWR+Q +L+ 
Sbjct: 155 PKDGRLRSICDQLSATPSDSSNAAEWAASIHVGERTLHRLFAKETGMTFAQWREQARLLH 214

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKK 246
           AL+G+  G+ V +VA   GY S +AF  MF++
Sbjct: 215 ALRGIAAGNKVIEVALDCGYGSASAFAAMFRR 246


>UniRef50_Q2BIT2 Transcriptional regulator, AraC family protein n=1
           Tax=Neptuniibacter caesariensis RepID=Q2BIT2_9GAMM
          Length = 262

 Score =  137 bits (344), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 118/239 (49%), Gaps = 3/239 (1%)

Query: 20  VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79
           + + + +  ++   P   H  G+ + +  G +    E   + VPP + +W P G EH   
Sbjct: 20  IYYFLRSMPEDTIYPAQTHPWGEFVFSFSGVLELHAEEQEFRVPPNFGLWHPAGTEHQGG 79

Query: 80  VTANAELCFLFIEPSAVT---MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136
               +E C L+I+    T   MP T C L +SP+ RE+++ L N            RL+ 
Sbjct: 80  NRNASEHCSLYIDDELATKRGMPKTSCALLVSPMLREMLIHLRNHFPKPPYTEQESRLLD 139

Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196
           V+ D+L   P    +LP S  P I  ++  +   P    ++   A  F MSER LAR   
Sbjct: 140 VILDQLIVTPIAGNYLPDSKDPLITQVLAYLKDDPGANHSIRAIAEQFGMSERTLARKAQ 199

Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            E  +   +WRQ+L+++ A+  L +G +V+ VA  LGY + +AFI MFK+ LG TP  Y
Sbjct: 200 SELNMPLSEWRQRLKVVRAVPMLQEGTSVESVALDLGYSTASAFIAMFKRLLGTTPDEY 258


>UniRef50_Q221Z0 Transcriptional regulator, AraC family n=9 Tax=Proteobacteria
           RepID=Q221Z0_RHOFD
          Length = 273

 Score =  137 bits (344), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 118/223 (52%), Gaps = 1/223 (0%)

Query: 34  PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93
           P H+H  G+ + +  G +   + +  ++ PPQY +W+P  VEH       A  C L+I P
Sbjct: 38  PQHRHAWGEFVYSFSGVMEVKLADHHYLAPPQYGIWLPPDVEHVGLNRYEAVHCSLYIAP 97

Query: 94  SAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152
                +P   C L +SPL R L+  L  +   Q       RL++VL D+L   P    +L
Sbjct: 98  QGCGNLPRAACALTVSPLVRALLEHLRQQPPEQPGTLQDERLLRVLVDQLALAPCAGSYL 157

Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212
           P S    +  ++ M+ + P +  +L + A     +ER L R   ++ G+SF +WRQ+L++
Sbjct: 158 PSSDDALLGAVLRMLEEQPGDNRSLPELAHAVHTTERTLMRRARRDLGMSFVEWRQRLRV 217

Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           + A+  L  G TV+ +A  LGY S +AFITMFK+ +G TP  +
Sbjct: 218 VKAMPLLEAGQTVETIALDLGYGSASAFITMFKRLVGTTPDEF 260


>UniRef50_Q2RRF5 Transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria
           RepID=Q2RRF5_RHORT
          Length = 247

 Score =  136 bits (342), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 80/224 (35%), Positives = 114/224 (50%), Gaps = 3/224 (1%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE--LCFLFIEP 93
           H H   QL+ A+ G          W+VPP  AVW+P G+ H  +     +    ++ IE 
Sbjct: 23  HSHPWCQLVYAIGGVTIVETPEGSWVVPPDRAVWVPAGITHCVRAARGGQNRSVYVTIEA 82

Query: 94  S-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152
           + A  +P  C  + +SPL RELIL    R      +    RL++VL D++   P Q LHL
Sbjct: 83  AQAAGLPKGCKVVAVSPLTRELILEFGRRPDDYDEDGADGRLVRVLLDQIAALPAQPLHL 142

Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212
           P    P+   +   +   P +   L +WA     S R LAR    + GL+F QWR +L+L
Sbjct: 143 PWPRDPRALAVARALEADPADGRPLEEWAREAGASARTLARTFRADCGLTFGQWRLRLRL 202

Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           + AL+ L  G+ V  VA  +GYD  +AFI MF++ LG TPG Y 
Sbjct: 203 LGALERLAAGEAVTAVAFDMGYDQPSAFIAMFRRLLGTTPGAYF 246


>UniRef50_B0RW44 Transcriptional regulator, AraC family n=6 Tax=Xanthomonas
           RepID=B0RW44_XANCB
          Length = 329

 Score =  136 bits (342), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 122/227 (53%), Gaps = 5/227 (2%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H +GQL+    G +T   E+    +PP  A W+P G +H+ ++        + + P A
Sbjct: 89  HAHVRGQLMYVEQGVLTVHTEHGTSSLPPGCAGWMPPGQQHTVELAGPLRGWGVVVRPDA 148

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQR----AEPMTRRLIQVLFDELPQQPQQQL 150
            T +P     +++S L RE+I+  A+   ++      +P  +RL  VL DEL Q P + L
Sbjct: 149 CTGLPARSGVIRLSGLAREVIMRAASWPLSEMLGEPVDPARQRLAAVLLDELCQAPIEHL 208

Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210
           HLP+ +  ++  +   +   P +   L  WA +  +S R+L+R    ETGLSF QWRQQ 
Sbjct: 209 HLPMPADRRLLRIARQLLDTPADPRPLDVWATWGGLSPRSLSRHFRDETGLSFAQWRQQA 268

Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           +L   L+ L +G  V +VA  LGY S +AF+++F +  G  P RY+A
Sbjct: 269 RLAEGLRRLSQGTAVAQVADQLGYSSPSAFVSVFHRHFGAPPARYLA 315


>UniRef50_Q7MFB7 AraC-type DNA-binding domain-containing protein n=32
           Tax=Gammaproteobacteria RepID=Q7MFB7_VIBVY
          Length = 287

 Score =  136 bits (342), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 117/225 (52%), Gaps = 1/225 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H  GQ+ L   G +    +   ++ PP  A+W+P G+ H +      E C L I    
Sbjct: 62  HSHTWGQVQLISGGILEMEAQGTRFLAPPHLAIWVPPGIMHRSFNRRPLEYCSLNIAKQL 121

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
               P   C ++++P+   +I     R      E   +RL+QVL D+L  +  Q   LP 
Sbjct: 122 TDKFPGKTCLIQVTPIVSAIIDDFRLRDINVATEESDKRLVQVLLDQLATKETQHHFLPS 181

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
           S H  +  ++  + + P +  +L +WA     +ER LAR    E G+SF +WR +++ + 
Sbjct: 182 SDHKYLAPILAHVEENPTDTTSLSEWAEKVHTTERTLARHCQSELGMSFTEWRLRVRYLY 241

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
           +++ L KG TV++VA TLGY+  + FI+MFKK  GQTP +Y  RL
Sbjct: 242 SMELLRKGQTVKEVALTLGYNQASPFISMFKKYSGQTPEQYKNRL 286


>UniRef50_Q0B9P3 Transcriptional regulator, AraC family n=14 Tax=Proteobacteria
           RepID=Q0B9P3_BURCM
          Length = 322

 Score =  136 bits (342), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 114/234 (48%), Gaps = 6/234 (2%)

Query: 26  AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85
           AGT   T P H H +GQ   A  G I+ +  +  W+VPPQ A W+P GV H   +T    
Sbjct: 88  AGT---TFPEHAHGRGQFAFASRGTISVSTPHGRWLVPPQRACWVPPGVRHEMTMTGAVT 144

Query: 86  LCFLFIEPSAVT---MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDEL 142
           +   F+   A     +P  C    +SPL R+LI            +    +L+ +L  E+
Sbjct: 145 MLNTFVSDDAARAAGLPDQCGVYGVSPLLRQLIDDAIELPAMYDVDGRAGKLMALLVAEI 204

Query: 143 PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202
              P+  LH P+ +  ++ ++   +   P     L Q A    +S R   RL   +TG+S
Sbjct: 205 ATMPRLSLHAPLPADARLASICRHLFASPSIAADLDQVATHAGVSRRTFTRLFRAQTGVS 264

Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           F  WRQQ+ ++ A+  L  G  V +VA  LGY S +AF + F++ LG TP RY+
Sbjct: 265 FAAWRQQVCMLAAITRLSDGQPVTRVAFELGYASASAFTSAFRRILGDTPSRYL 318


>UniRef50_C7MAZ5 Transcriptional regulator containing an amidase domain and an
           AraC-type DNA-binding HTH domain n=2 Tax=Actinomycetales
           RepID=C7MAZ5_BRAFD
          Length = 261

 Score =  136 bits (342), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 123/247 (49%), Gaps = 4/247 (1%)

Query: 27  GTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL 86
           G DE T P H H +G L+    G ++   E+  W+ PP  A WIP G  H ++     ++
Sbjct: 18  GHDERT-PSHVHEQGHLVYPASGVLSIVTEDGSWIAPPNRAAWIPAGSFHQHRAHGATDM 76

Query: 87  CFLFI-EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
             +F+ + +A  +P     L ++PL RE   TLA  +   R      RL +V+ D+L   
Sbjct: 77  RIVFMADAAAGLLPAHPSVLAVTPLAREA--TLALTSDVPRTAESRERLRRVIIDDLTAA 134

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
           P+Q LHLP     ++R +  ++ +   +   L Q        ER L+RL  + TG+SFRQ
Sbjct: 135 PEQPLHLPEPRDERLRALTHLVEQEMEDPATLEQLGRRIGAGERTLSRLFQQTTGMSFRQ 194

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ 265
           WR QL++  AL  L  G +V   A   G+ + +AFI  F   +GQTPGRY   L   S  
Sbjct: 195 WRIQLRIHRALLLLTDGLSVVDTATACGWANPSAFIDAFTALVGQTPGRYQRSLRGASSP 254

Query: 266 SAKPDPR 272
             +  PR
Sbjct: 255 LPETPPR 261


>UniRef50_A3D530 Transcriptional regulator, AraC family n=12 Tax=Gammaproteobacteria
           RepID=A3D530_SHEB5
          Length = 283

 Score =  135 bits (341), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 123/238 (51%), Gaps = 3/238 (1%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS- 94
           H H +GQL+ A  G +    ENA+W+VP  +AVWIP  + H      +A    ++I+PS 
Sbjct: 42  HSHPRGQLLWAAKGLLRVRSENAVWVVPSTHAVWIPCNLPHQVNSETHAHTRNIYIDPSY 101

Query: 95  -AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153
              ++ T    + ++ L REL+L L   +    +  +  RL  V  DEL        HLP
Sbjct: 102 DVRSLDTQVVMVTMTALMRELVLKLCESSHLMNSGQL-HRLGLVAIDELETLDSLDAHLP 160

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
             S P++  +++ + + P     L + A     S R + RL   ETGL++RQWRQ+ +L+
Sbjct: 161 AGSDPRLSRLIQKLIRHPTVNYTLTELAEMGGASVRTIERLFKAETGLTYRQWRQRFRLL 220

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSAKPDP 271
            +L+ L +G++  +VAH+LGY S ++F   FK   G TP  Y       S  +  PDP
Sbjct: 221 NSLESLSQGESTTRVAHSLGYLSVSSFSAAFKMQFGCTPQDYPQHKPMKSKVNWFPDP 278


>UniRef50_C3KCF4 Putative transcriptional regulator n=1 Tax=Pseudomonas fluorescens
           SBW25 RepID=C3KCF4_PSEFS
          Length = 257

 Score =  135 bits (341), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 114/224 (50%), Gaps = 1/224 (0%)

Query: 34  PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93
           P H H K QL+ A+ G +        W VPP   +W+P G  HS +     ++  +F+ P
Sbjct: 33  PDHSHEKHQLLYAIEGVMVVYSALNQWTVPPNRGIWMPSGQVHSLRCVGTLKMRSVFVRP 92

Query: 94  SAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152
                MP    T+ ISPL  ELI    +       +    R++ ++ DEL   P   L L
Sbjct: 93  DRFPNMPGEPKTVSISPLLSELIKASVSLKPPYAEDSREARIMHLILDELAILPALPLAL 152

Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212
           P  + P+I+ +   +   P +   +  W+    + +  + RL  K TG++F QWRQQ +L
Sbjct: 153 PQPADPRIKQICLALQDDPGDASTVADWSARLNLDQTTIQRLFRKATGMTFGQWRQQARL 212

Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           ++AL+ +  G+ V  +A  LGY+S +AF +MFKK  G+TP ++ 
Sbjct: 213 LLALERIAVGEKVIDIALELGYESPSAFTSMFKKQFGKTPSQFF 256


>UniRef50_Q3JQZ2 Transcriptional regulator, AraC family n=59 Tax=Burkholderiales
           RepID=Q3JQZ2_BURP1
          Length = 450

 Score =  135 bits (341), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 127/251 (50%), Gaps = 8/251 (3%)

Query: 10  YEPDRHHEAAV-AFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAV 68
           + P R H   V A  I AG   +  P H H   QL  A  G +      + WMVPP  A+
Sbjct: 185 FAPTRSHPMRVRARAIAAG---MRVPPHAHAWAQLAYASRGVLRLATAGSTWMVPPSRAI 241

Query: 69  WIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCC-TLKISPLCRELILTLANRTTTQRA 127
           W+P  + H   +  +A L  L+++ SAV      C  +++S L RELI+ L  R+  +  
Sbjct: 242 WVPPRIAHEVVIVEDAYLRTLYVDESAVPGGLDACRVVEVSGLLRELIVALEARSLNRTR 301

Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187
           E   R L +++ DEL +     L +P+ +  ++R + E +   P +  +L  WA     S
Sbjct: 302 E---RLLAELVLDELTRAEPLPLAVPMPTEKRLRALCEAVLAHPAQGESLEHWAAGVGAS 358

Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247
            R +ARL  +E  +SF QWRQQ  L  A+  L +G  +  +A+ LGY S +AF  MF++ 
Sbjct: 359 TRTIARLFKQELSVSFSQWRQQALLARAIPLLNQGRPLSHIANELGYQSQSAFSAMFRRA 418

Query: 248 LGQTPGRYIAR 258
            G +P  +I R
Sbjct: 419 FGASPRAFIQR 429


>UniRef50_B1JZJ0 Transcriptional regulator, AraC family n=2 Tax=Burkholderia
           cenocepacia RepID=B1JZJ0_BURCC
          Length = 261

 Score =  135 bits (341), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 115/227 (50%), Gaps = 8/227 (3%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           HQHR GQL+ A  G +        W +PP  AVW+P  V+H      +  LC +++EP  
Sbjct: 36  HQHRHGQLVFAAKGVVRVLTPARTWTLPPSRAVWLPSDVDHELHAVGDTALCSVYMEPEV 95

Query: 96  VTMP-TTCCTLKISPLCRELILTLAN----RTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150
              P      + +S L REL LT+ +     T T RA      L++VL  E P   +  +
Sbjct: 96  FPWPWEEPAVIAVSALLRELALTVVDGADTYTATSRAGLAASLLMKVL-AETPSLAEPGV 154

Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210
            LP     ++  + E M   P     L  W   F  S R LAR +  ETGL+F  WRQQ+
Sbjct: 155 PLPRDE--RLLKLCEHMMNDPASDLTLDFWGEQFGASGRTLARRLHAETGLTFVAWRQQM 212

Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           ++  A+  L  G +V +VA  LGY S +AFI MF++  G++P RY+A
Sbjct: 213 RVAEAMTRLALGQSVARVAKDLGYRSASAFIVMFRRITGESPQRYLA 259


>UniRef50_Q13M62 Transcriptional regulator, AraC family n=4 Tax=Burkholderia
           RepID=Q13M62_BURXL
          Length = 266

 Score =  135 bits (340), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 122/256 (47%), Gaps = 7/256 (2%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           MM  ++ +G E         AF I    + L  P+   R+ +LI A  G +    E   W
Sbjct: 17  MMDTVDPDGVE-------QPAFVIGEHHETLDEPLGAFRRARLIHASAGVLIVRTETGRW 69

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120
           +VPP +A+WIP GV H    T     C L+    AV +P     +    L   L+   A+
Sbjct: 70  VVPPGHALWIPAGVLHRLSATGPVRFCSLYAGADAVPLPFHSIAVVPDRLVAALLSAAAD 129

Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180
               +  +    RL+QVL D LP  P   L L     P+   + + ++  P +   L   
Sbjct: 130 LPHDKPFDEPAARLVQVLLDRLPGLPVAPLGLNWPRDPRALRIADALSSNPADSAVLEDL 189

Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240
           A    ++ R  ARL VKETG +F QWRQQL+L+ A++ L  G +V +VA  +GY   ++F
Sbjct: 190 AAAAGVTARTAARLFVKETGQTFGQWRQQLRLLAAVEHLGAGASVTQVAPEVGYSDVSSF 249

Query: 241 ITMFKKGLGQTPGRYI 256
           I +F+   G TP RY 
Sbjct: 250 IAVFRDAFGDTPARYF 265


>UniRef50_B1TGD6 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria
           RepID=B1TGD6_9BURK
          Length = 261

 Score =  135 bits (340), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 123/250 (49%), Gaps = 5/250 (2%)

Query: 10  YEPDRHHEAAVAFC----IHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65
           YEP+   +   A C    I   + E  S  H H++ QL+    GA+T      +  + P 
Sbjct: 4   YEPNHVLDLDAASCPIVGIAYESREHDSQWHAHQRTQLLYLTEGAVTLQTAERIGHLAPL 63

Query: 66  YAVWIPGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTT 124
            A+W+P GV H   +        L+ +      +P     +++S L RELI+ +      
Sbjct: 64  QAIWLPEGVRHRAVMHGRFAYRSLYFDVQTYRDLPRAAVIIEVSQLLRELIVRVTEWPID 123

Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184
                   RL+ VL DEL   P   L+LP+    ++  +   +   P E   L +WA   
Sbjct: 124 DALTDARTRLVSVLLDELEAAPASPLYLPMPRDRRLGAIANALVDDPSEQRTLDEWADRV 183

Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244
             S R LARL V+ETGL++ QWR + +L++A   L +G ++ +VAH +GY S +AFI M+
Sbjct: 184 GASARTLARLFVRETGLTYVQWRTRCRLLVAQTRLAEGASITEVAHAVGYASDSAFIAMY 243

Query: 245 KKGLGQTPGR 254
           ++  G+ PGR
Sbjct: 244 RRLYGEPPGR 253


>UniRef50_Q4KJ22 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria
           RepID=Q4KJ22_PSEF5
          Length = 262

 Score =  134 bits (338), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 113/221 (51%), Gaps = 1/221 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS- 94
           H+H  G L  + HG +   +    +M PPQYAVW+P    HS           + + P  
Sbjct: 34  HRHPWGCLEYSAHGVMHMEIAGQRFMSPPQYAVWVPPQTPHSFYTAQPINYRAVLLAPEL 93

Query: 95  AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
              +P    TL IS + + ++   A R          +RL QVL D+L Q P    +LP 
Sbjct: 94  CAELPAGGSTLAISEILKAILKDFAARDVQIPEGEADQRLAQVLLDQLRQAPVHTCYLPY 153

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
           +S P +  +++ +   P     L  WAG   +SER LAR  V+E G+SF +WRQ+ + + 
Sbjct: 154 ASSPDLLRVLQALQAEPGNNQPLAHWAGLAHVSERTLARQFVRELGMSFGEWRQRQRFLA 213

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           +++ L    ++Q++A  +GY S +AFI MF++  G TP +Y
Sbjct: 214 SIEALESSRSIQEIAFDMGYSSASAFIAMFQRQAGSTPEQY 254


>UniRef50_D1RUP3 Transcriptional regulatory protein n=2 Tax=Enterobacteriaceae
           RepID=D1RUP3_SEROD
          Length = 285

 Score =  134 bits (338), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 126/239 (52%), Gaps = 6/239 (2%)

Query: 24  IHAGTDELTS---PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV 80
           I  GTD  +    P+H HR+ QL+    G +        W+VPPQ AVW+P  + H  ++
Sbjct: 41  IAIGTDYPSGHLLPMHSHRRAQLLYGATGVMHVFTHQGNWIVPPQRAVWLPPQMPHEVRM 100

Query: 81  TANAELCFLFIEPSAV--TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL 138
                   L+IEP+A+  + P  C  + ++PL R+L++   +       +     L+ +L
Sbjct: 101 VGVTTRS-LYIEPTALLASQPQVCQVVSVTPLMRQLLMAAVDMPLEYDPDGRDGALVFLL 159

Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198
             EL Q     LH+P+ +  ++  + ++    P    +  +WA    MS R  +R    +
Sbjct: 160 LHELAQLQSLPLHIPLPADRRLGELCQLFLLQPNAHDSPQEWATRLYMSIRTFSRFFRAQ 219

Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           TG+SF QWRQ+  +++AL  L +G++V +VA  LGY+S+ AF TMF++ LGQ P  Y+ 
Sbjct: 220 TGMSFSQWRQRACVVLALAQLTEGNSVTQVALELGYESSAAFATMFRRVLGQAPSCYLG 278


>UniRef50_Q14GY1 Transcriptional regulator araC family protein n=19 Tax=Francisella
           RepID=Q14GY1_FRAT1
          Length = 282

 Score =  134 bits (336), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 113/226 (50%), Gaps = 1/226 (0%)

Query: 33  SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92
           S  H HR+G++     G +  +  N  W++P   A WIP    H  +++   E   +FI 
Sbjct: 45  SDWHHHRRGKIFCIESGLVHVSTPNGSWVLPSNRAGWIPPNTSHKIRISGIVEGWVIFIH 104

Query: 93  PSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151
           P+    +P +   + +S + R L L                 + +++ +E+   P++ LH
Sbjct: 105 PNMCDDLPKSSRVIPMSEVLRALALRATEWDKYNNLSLEQEHIAKIICNEIRLAPEEALH 164

Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211
           LP+    ++  +   +   P    +L QWA F AMS R L R  + ETGLSF +WRQQ Q
Sbjct: 165 LPMPKTDRVIKVANAIIDNPSISKSLEQWAAFAAMSPRTLRRAFLSETGLSFSRWRQQAQ 224

Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           L   L  L K  +V +V+ +LGY S + FI MF+K  G+TP +Y +
Sbjct: 225 LARGLDMLAKDISVTEVSDSLGYASPSNFIAMFRKAFGKTPKQYFS 270


>UniRef50_B9R0N9 Transcriptional regulator, AraC family protein n=1 Tax=Labrenzia
           alexandrii DFL-11 RepID=B9R0N9_9RHOB
          Length = 279

 Score =  134 bits (336), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 115/223 (51%), Gaps = 1/223 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE-PS 94
           H H   QL   + G+I    E   +  PP+ AVW+P  + H  +   + E+ F+++    
Sbjct: 53  HSHDSAQLFHVVKGSIAIDTEVGTFFAPPERAVWLPPRIAHETRYLTDTEIRFVYVNYDH 112

Query: 95  AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           A  +P T   ++++ L R LIL   +    +  +    R+  V+ D+L   P   L LP+
Sbjct: 113 AQDLPKTAQVIQVTTLLRALILEFMSYPRAETIDGPAGRIADVILDQLKMLPAAPLQLPM 172

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
              PK+R + + + + P    AL   A   AMS R+  R I  ETG+++R W +Q++L  
Sbjct: 173 PQDPKLRDLCDGLVRCPAHVPALADAAARSAMSVRSFERRIKAETGMNYRTWCRQVKLFR 232

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           AL+ L  G +V  V+H LGY+  +AF+  F+K  G TPGRY  
Sbjct: 233 ALELLAAGRSVSDVSHKLGYEGPSAFVATFRKAFGVTPGRYFG 275


>UniRef50_A3Y5B2 Probable transcriptional regulator n=1 Tax=Marinomonas sp. MED121
           RepID=A3Y5B2_9GAMM
          Length = 258

 Score =  133 bits (335), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 115/225 (51%), Gaps = 2/225 (0%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
           +H H   QL+ A  G +    +N +  VPPQ A+W+P   +H  +V   A    ++  P 
Sbjct: 33  LHHHIWYQLMYASSGVLNVEYQNQIMFVPPQKAIWLPPNCDHRVRVPVGAHFHSVYFRPD 92

Query: 95  AVT-MPTTCCTLKISPLCRELILTLANRTTTQRA-EPMTRRLIQVLFDELPQQPQQQLHL 152
            VT +  T   L ++PL RELIL +   T   +  +   +RL QVL D+L  Q    L +
Sbjct: 93  TVTALGNTSKVLSVTPLVRELILAVGEMTHEDKELDDKDKRLTQVLIDQLSLQADSALSI 152

Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212
            + S  ++  +V  +   P    +L +WA    +S R + R+  KE G+ F++WRQ+++L
Sbjct: 153 LIPSDKRLAELVRQIIHTPSNGVSLEEWAQTLNLSSRTITRIFTKEVGMGFKEWRQKVRL 212

Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           + A+  L KG +V +VA  +GY S +AF   FK+     P  Y  
Sbjct: 213 LEAINLLEKGLSVTQVALEVGYQSPSAFTYAFKQVFDTNPASYFV 257


>UniRef50_A9ISK4 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria
           RepID=A9ISK4_BORPD
          Length = 393

 Score =  133 bits (335), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 123/237 (51%), Gaps = 3/237 (1%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
           +H H +GQL+ +L G ++    + LW+VP   A+WIP G+ H+ +          ++ P 
Sbjct: 155 MHHHARGQLLGSLRGLLSVGTGDGLWVVPAAQAIWIPPGMPHNLRSHGPFAGWSAYLAPQ 214

Query: 95  AVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153
           A   +P   C +  S L R  +L  A      R+E    RL  V+ DE+   P+    LP
Sbjct: 215 ACAGLPDAVCAMPCSELLRATVLRAA--AGNSRSEAANERLAGVILDEIHALPRSAPGLP 272

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
           +   P++  + + +A  P     L  WA + AM+ R L R   +ETGL F  WRQ+L+L+
Sbjct: 273 MPRDPRLLRIAQALADEPGNPRRLEDWARWAAMAPRTLMRRHQQETGLPFGDWRQRLRLM 332

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSAKPD 270
            AL+ L  G  V  VA  LGYD+ +AFI MF++  G TP RY  +   + P ++ P+
Sbjct: 333 RALEMLAAGRPVTTVALDLGYDNVSAFIAMFRRAYGTTPARYFDQSRPLPPGASAPE 389


>UniRef50_Q4K821 Transcriptional regulator, AraC family n=22 Tax=Bacteria
           RepID=Q4K821_PSEF5
          Length = 274

 Score =  133 bits (335), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 119/225 (52%), Gaps = 4/225 (1%)

Query: 34  PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93
           P H+HR+ QL+    G +  + +   W+VPPQ AVWIP GVEH   +        L+IEP
Sbjct: 41  PRHRHRRAQLLYGATGVMQVSTDQGNWVVPPQRAVWIPPGVEH-EVLMLGVSTRSLYIEP 99

Query: 94  SAVTMPTTCC-TLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152
           +A  + ++ C  + ISPL R+L+L   +       +     LI +L  E+ + P   LH+
Sbjct: 100 AAAPLDSSGCRVIGISPLLRQLLLEAVDMPLEYDLDGRDGLLINLLLHEIQRCPGLPLHI 159

Query: 153 PV-SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211
           P+ +  P +      +A+  V    L  WA    +S R   R   +ET +SF QWRQ+  
Sbjct: 160 PLPAGGPLLELCRAFLARPDVHQSPL-HWADRLHVSLRTFNRWFRQETDMSFVQWRQRAC 218

Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           +I AL  L   + V ++A  LGYDS  AF TMF++ LGQ+P  Y+
Sbjct: 219 VIQALARLAAAEPVTRIALDLGYDSPGAFSTMFRRVLGQSPSTYL 263


>UniRef50_Q391T4 Transcriptional regulator, AraC family n=8 Tax=Proteobacteria
           RepID=Q391T4_BURS3
          Length = 288

 Score =  133 bits (335), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 118/246 (47%), Gaps = 3/246 (1%)

Query: 13  DRHHEAAVAFCI-HAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           D  H   +A  +  A  D      H+H + QL+    G        +LWM+PP  A+WIP
Sbjct: 36  DYQHAPGIAAVMPKAFPDGFVVAEHRHPRAQLVYTTTGIAEVIASQSLWMIPPHRALWIP 95

Query: 72  GGVEHSNQVTANAELCFLFIEPSAV--TMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129
             + H+ +     E+   +++P A     P     + +SPL RELI+  +        + 
Sbjct: 96  PDLPHAMRAHGQLEMRTAYVDPRAYRSATPEQPSLVNVSPLLRELIVRASAFPVEVNPDG 155

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
               +IQ++  E+    +Q L LP     ++  + + +   P +   L +WA     S R
Sbjct: 156 RDDLVIQLMLAEIEWSAEQPLRLPSGQDRRLARVCDAILANPADQRTLTEWADEVGASSR 215

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
            LARL   ETGLSF QWRQQ ++  A   L  G +V  VA  LGY++T+AF T+F++  G
Sbjct: 216 TLARLFTAETGLSFSQWRQQARISAARPLLASGRSVIAVAAELGYETTSAFSTVFRRFAG 275

Query: 250 QTPGRY 255
            TP  Y
Sbjct: 276 MTPSAY 281


>UniRef50_Q0KFJ5 Transcriptional regulator, AraC-family n=11 Tax=Proteobacteria
           RepID=Q0KFJ5_RALEH
          Length = 291

 Score =  133 bits (335), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 117/245 (47%), Gaps = 2/245 (0%)

Query: 13  DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72
           DR      A         +T+P HQH   QLI A+HG +        W+VPP   +W+PG
Sbjct: 47  DRSPLPVTAMAADYLPGHVTNP-HQHPHAQLIHAVHGVMVVATTEGQWIVPPTRGMWMPG 105

Query: 73  GVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131
           G  H  ++    ++   +I P A   +P  C  L IS L RELIL   +           
Sbjct: 106 GTTHWIRMVGRVQMRTAYIRPDAAPDLPQRCTVLGISALLRELILAAIDIPLPYAPGTRG 165

Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191
            RL+++L DE+   P   LHLP  +   +R + + +   P     L  W     +  + +
Sbjct: 166 ARLMRLLLDEVMLVPSLPLHLPRPADDSLRQICDAITGAPDTALTLADWGSRLGLDPKTI 225

Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251
            R   +ETG++F QWRQQ +L+ AL+ L  G  V  VA  LGYDS +AF TMF++  G  
Sbjct: 226 QRRFARETGMTFGQWRQQARLLAALEKLAAGSKVVDVALDLGYDSPSAFATMFRRQFGVP 285

Query: 252 PGRYI 256
           P  + 
Sbjct: 286 PSAFF 290


>UniRef50_D1X8C9 Transcriptional regulator, AraC family n=2 Tax=Streptomyces
           RepID=D1X8C9_9ACTO
          Length = 304

 Score =  133 bits (334), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 113/225 (50%), Gaps = 9/225 (4%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI--- 91
            H+H   Q++ A  G +T T     W+ P   A+W+P G  H+++     +L  + +   
Sbjct: 82  AHRHDDHQIVYAGRGVLTVTTSAGSWVAPATRAIWVPAGTVHAHRAYGELDLHLVGLPVT 141

Query: 92  -EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150
             P  +  PT    L +SPL REL++         R  P   RL  VL D+L    QQ L
Sbjct: 142 ENPLGLETPTV---LAVSPLLRELLIAYTRAEDDDR--PERARLRAVLLDQLRASAQQPL 196

Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210
           HLP  + P +R + +++   P +   L +       S+R L+RL   + G++F QWR QL
Sbjct: 197 HLPTPTTPLLRALCDILRADPADSRTLAELGHLVGASDRTLSRLFRSDLGMTFPQWRTQL 256

Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           +L  AL  L +   V  VAH  G+ ST+AFI +F++  G TPG +
Sbjct: 257 RLHHALILLTERTPVTAVAHQCGWSSTSAFIEVFRRTFGHTPGSH 301


>UniRef50_B4EHM1 AraC family regulatory protein n=5 Tax=Burkholderia cenocepacia
           RepID=B4EHM1_BURCJ
          Length = 271

 Score =  133 bits (334), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 116/223 (52%), Gaps = 6/223 (2%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI-EPS 94
           H H+ GQL+    G +   VE   W+ PP  A+WIP    H+ +V  + +LC L++ +  
Sbjct: 45  HAHQAGQLLFTTRGVLVLDVEGQRWITPPLRAIWIPARTVHAMRVADDVQLCSLYLGDAL 104

Query: 95  AVTMPTTCCTLKISPLCRELILTLANR-TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153
              +P T C + +SPL REL   +++    +   +P+ R    +  DEL +  Q  L LP
Sbjct: 105 GARLPATLCAMTVSPLLRELATRVSHPFDCSVDHDPLAR----LFADELSELAQTPLTLP 160

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
           +    ++  + E + + P     L   A   A+S R+LARL   ETG+S   WRQQL+L 
Sbjct: 161 LPRDRRLLKLCERLQREPHCELPLDTLARDAALSARHLARLFRSETGMSVAAWRQQLRLS 220

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           M+L  L  G  V + AH +GY S T +   FK+  G TP +Y+
Sbjct: 221 MSLALLASGMPVTQAAHQVGYRSPTTYAATFKRAFGVTPSQYL 263


>UniRef50_C3K8M6 Putative AraC-family regulatory protein n=1 Tax=Pseudomonas
           fluorescens SBW25 RepID=C3K8M6_PSEFS
          Length = 265

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 128/264 (48%), Gaps = 10/264 (3%)

Query: 5   LNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPP 64
              + Y+PD            +GT     P H HR+GQ   A  GA+    +   W+VPP
Sbjct: 5   FTFSPYKPDSPEAVVTLREYPSGT---VFPRHTHRRGQFAYASTGALKMFTDLGNWVVPP 61

Query: 65  QYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT---MPTTCCTLKISPLCRELILTLANR 121
           Q A+W+PGGV H   +  +  +   +++ +A     +   C    +SPL R L+   A  
Sbjct: 62  QRAIWVPGGVSHEMHMRGDVVMLNTYLDDAAARRAGLQDYCQVFGVSPLLRHLLE--AAL 119

Query: 122 TTTQRAEPMTRR--LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
                A P  R   ++ +L DE+   P+  L  P+ S  ++    +     P +  ++G+
Sbjct: 120 AIGPSASPSVRDCCVLTLLIDEIGTMPELPLSAPLPSESRLARSCQRFLDAPTQKISIGE 179

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
            A + +MS R   R   + TG++F  WRQQ+ L+ A   L  G ++  VA  LG+ S++A
Sbjct: 180 MADWSSMSRRTFTRNFRECTGMTFVSWRQQVCLLEATARLSHGSSITDVAFELGFSSSSA 239

Query: 240 FITMFKKGLGQTPGRYIARLTTVS 263
           F ++F++ LG +P RY+A+    S
Sbjct: 240 FTSVFRRNLGDSPARYLAKSKAAS 263


>UniRef50_A5F0T8 Transcriptional regulator, AraC/XylS family n=40 Tax=Vibrionaceae
           RepID=A5F0T8_VIBC3
          Length = 263

 Score =  132 bits (332), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 115/225 (51%), Gaps = 1/225 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H  GQ+ L   G +    E+  ++ PP  A+W+P G+ H +      E C L I    
Sbjct: 37  HSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAGIRHRSYNRKPIEYCSLNIASQL 96

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
            T  P     +K++ +   +I     R          +RL+QVL D+L  +  Q   LP 
Sbjct: 97  TTAFPAKTSLIKVTSIVSAIIDDFRERNINVAQSSEDKRLVQVLLDQLATRETQHHFLPS 156

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
           ++H  +  ++  + + P +   L QWA     +ER LAR    E G+SF +WR +++ + 
Sbjct: 157 TNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLARHCQAELGMSFTEWRLRVRYLY 216

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
           +++ L +G  V++VA TLGY+  + FITMFKK  G TP +Y +RL
Sbjct: 217 SMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTPEQYKSRL 261


>UniRef50_Q47EU9 Transcriptional regulator, AraC family n=4 Tax=Bacteria
           RepID=Q47EU9_DECAR
          Length = 273

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 112/229 (48%), Gaps = 2/229 (0%)

Query: 30  ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89
           E+  P H+H   QL   L G I  +     W+VP   AVWIP  +EH   +    E   +
Sbjct: 31  EVYVPPHRHDWAQLAYPLRGGIRISAAGMTWLVPALRAVWIPPHIEHDLLMLGEVEFRTV 90

Query: 90  FIEPSAVTMPTTCCT-LKISPLCRELILTLANRTTT-QRAEPMTRRLIQVLFDELPQQPQ 147
           +I P    +P   C+ +++S L R L   L+      Q      R++  +L  E+ + P 
Sbjct: 91  YIAPEVAPLPLDACSVIEVSDLMRALFEALSEADGDGQEPSLRQRQVTALLLTEIRRAPP 150

Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207
             L LP+    +++ + + +   P    +L +WA     SER LARL V E  LSF  WR
Sbjct: 151 LSLGLPMPHDRRLQALCQALIDEPASPLSLAEWAARVGASERTLARLFVSELKLSFGAWR 210

Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           QQL+L  AL  + +G    +VA  LGY S  AF  MFK+  G  PGR++
Sbjct: 211 QQLRLARALDLIGRGRPCGEVAAELGYASPAAFSAMFKRAFGVPPGRFM 259


>UniRef50_C4WMA6 AraC family transcriptional regulator n=1 Tax=Ochrobactrum
           intermedium LMG 3301 RepID=C4WMA6_9RHIZ
          Length = 249

 Score =  131 bits (330), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/240 (35%), Positives = 127/240 (52%), Gaps = 3/240 (1%)

Query: 19  AVAFCIHAGTD-ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77
           A+A    A  D     P H+HR  QLI A  G +T   EN  W+VPP  AVW+P  VEH+
Sbjct: 10  ALAISTIAQDDASFAGPPHRHRDAQLIYARSGVVTVATENGSWVVPPNRAVWVPPMVEHA 69

Query: 78  NQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136
            +     +   +FI P A  ++P++C  +++S L RELIL L      + A P   R+ +
Sbjct: 70  TRSHGPVQFRTIFIHPDAARSLPSSCGVVEVSSLLRELILRLVE-LQDRPATPFAHRVCE 128

Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196
           +L +EL   P + L L + S  ++RT+ + +   P    +L   A    MS R+  R   
Sbjct: 129 LLLEELTFLPAEPLSLSMPSDHRLRTLCQTLQAEPDTELSLDAAASRTGMSRRSFMRHFE 188

Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           +ETG+++ +WRQQ +L+ AL  L  G  V  VA   GY S +AF   FK+ LG++P  Y 
Sbjct: 189 RETGMTYGRWRQQARLLAALPALAAGVPVVTVALDCGYQSASAFAATFKRSLGRSPASYF 248


>UniRef50_Q2SEK4 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella
           chejuensis KCTC 2396 RepID=Q2SEK4_HAHCH
          Length = 255

 Score =  131 bits (329), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/231 (33%), Positives = 112/231 (48%), Gaps = 3/231 (1%)

Query: 27  GTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL 86
           GT+E     H H  GQL   L G      +   W++P     WIP GV H  Q       
Sbjct: 26  GTEEREG--HSHEHGQLFCVLQGLTVVDTDAGRWLMPSNRLGWIPPGVRHGAQYFGAIAG 83

Query: 87  CFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
             L++ P     +P   C  + + L   +I  +A  T  +  +   RRL+ VL DE+   
Sbjct: 84  WSLYLHPDICEPLPDEPCVYEANALMTPVIARIAEWTAGEPLDAPRRRLLHVLMDEIQAA 143

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
            Q  LHLP+    ++  +   +   P    +L   A    +SER L R   +ETGLS  Q
Sbjct: 144 QQPALHLPMPRDQRLLRLSHKLLATPENNDSLLALASDIGLSERTLTRKFREETGLSLGQ 203

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           WRQ  +L  AL+ L +G +V + A  LGYDS +AFI +F++  G+TPGRY+
Sbjct: 204 WRQLARLARALELLAQGVSVTQTALDLGYDSVSAFIALFRRYFGETPGRYL 254


>UniRef50_B0T088 Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. K31
           RepID=B0T088_CAUSK
          Length = 249

 Score =  130 bits (328), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 109/223 (48%), Gaps = 1/223 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS- 94
           H H  GQL+ A  G +    + A W+VPP  A+WIP G+ H       A +  L+I P  
Sbjct: 26  HAHVWGQLVFASAGVMRVATDAATWLVPPTKAIWIPAGLTHQILFGGEAAMRTLYIAPGR 85

Query: 95  AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           A T+PT    L+++PL RELIL +          P   RL  +L D + Q   Q L LP+
Sbjct: 86  AATLPTEPQALEVAPLLRELILHILKIGMLTPQRPEHDRLAGLLIDLMRQARSQDLCLPL 145

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
               +   +   +   P E   L   AG F  S R L R+  +ETGL+   WRQ+ +LI 
Sbjct: 146 PRDRRALALAIHLQARPDEERGLAALAGPFGASLRTLQRVFPRETGLTLETWRQKARLIH 205

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           ++  L  G +V   A   GY S  AFI  F +    TPGRY+A
Sbjct: 206 SVACLTTGASVTDAALASGYRSVGAFIGAFTRQFEVTPGRYLA 248


>UniRef50_C8Q2C9 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b
           RepID=C8Q2C9_9ENTR
          Length = 261

 Score =  130 bits (327), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 123/235 (52%), Gaps = 6/235 (2%)

Query: 25  HAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANA 84
           HAG +E     H H   QL+L L G +      A W + P  A+W+PG V H+    ++ 
Sbjct: 26  HAGREERW---HAHEVAQLVLCLQGVMRVQTHTASWTLTPGRALWLPGTVPHALTALSDI 82

Query: 85  ELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ-VLFDEL 142
               L++EP  A        ++ ISPL + L+ TL         +P+   LI  +L DEL
Sbjct: 83  RSLSLYLEPVVARAFWPEARSMMISPLLQALMQTLVEIGLQPHPDPLRAELITPLLLDEL 142

Query: 143 PQQPQQQL-HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGL 201
            + P+  +  LP+ +  ++  + + + + P     L +W      S R LARL   +TG+
Sbjct: 143 RRAPEGPVCVLPLPADRRLMNICQQLLQSPASSDTLEEWGSRVGASSRTLARLFRDQTGI 202

Query: 202 SFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           +F QWRQQL+L  AL  L +G  V ++A  LGY S +AFI+MF++ LG TP R++
Sbjct: 203 TFTQWRQQLRLSEALVQLAQGQPVLRIASQLGYQSPSAFISMFRRLLGDTPQRFL 257


>UniRef50_B5WKD5 Transcriptional regulator, AraC family n=1 Tax=Burkholderia sp.
           H160 RepID=B5WKD5_9BURK
          Length = 277

 Score =  129 bits (325), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 109/225 (48%), Gaps = 3/225 (1%)

Query: 34  PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE- 92
           P H H +GQ   A  G +T       W+VPPQ AVW+P  V H  Q++    +   F+  
Sbjct: 51  PDHTHTRGQFAYAAEGVMTVLTTAGNWVVPPQCAVWLPADVPHEMQMSGQVRMLNAFVHV 110

Query: 93  --PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150
               A  +P  CC +  S L R+LI     +           R++ +L DE+       L
Sbjct: 111 RAKQASQLPRHCCVVSTSSLLRDLISEAVQQPALYNPTTRAGRIMALLVDEIAAMQPLAL 170

Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210
           + P+ + P++  +   +   P     L + A    +S R+  RL  ++ G+SF  WR+Q 
Sbjct: 171 NAPLPNDPRLAALCREVLDAPSATLGLDEAASRIGLSRRSFTRLFREQLGVSFVAWREQA 230

Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            L+ A+    +G+++ +VA+ LGY S TAF TMFK+ +G  P  Y
Sbjct: 231 CLLSAIARFARGESITRVAYDLGYSSPTAFSTMFKRVVGVAPYHY 275


>UniRef50_A6W2J3 Transcriptional regulator, AraC family n=1 Tax=Marinomonas sp.
           MWYL1 RepID=A6W2J3_MARMS
          Length = 267

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 124/225 (55%), Gaps = 2/225 (0%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
           +H+H  GQL+ +L G ++   E+  W+VP  + VWIP    H  +         ++++P 
Sbjct: 37  LHRHAFGQLVGSLEGLLSVQTESGWWVVPATHTVWIPPNTLHGAKSHGPFRGWSVYLDPK 96

Query: 95  -AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153
            +  + ++  T + +PL +EL+   A+  +   ++ +  RL +VLFDE+   P+    L 
Sbjct: 97  RSQLLDSSPKTFQTTPLLKELVHRAAS-WSDDTSQAVKSRLSEVLFDEIVNLPETLFGLL 155

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
               P ++ M + +     +  +L +WA    +S R LAR   ++TGL F +WRQ+ +++
Sbjct: 156 QPGLPSLKKMTDGLLSNLADNRSLEEWARSIGLSSRTLARRFNEQTGLGFSEWRQRARVL 215

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
            A++ L     V  +A TLGY++ +AFI MF++ +G TPG+YI R
Sbjct: 216 SAIEMLADNVPVTNIAFTLGYENVSAFIAMFRRVMGVTPGQYIQR 260


>UniRef50_D2B3A1 AraC family transcriptional regulator n=5 Tax=Actinomycetales
           RepID=D2B3A1_STRRD
          Length = 265

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 116/222 (52%), Gaps = 4/222 (1%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H   QL     G ++  V++A W++PP  A+W+P GV H    T +A LC L++ P  
Sbjct: 39  HSHTHHQLAWTRSGVLSVAVDDAYWVLPPTRALWLPAGVVHRTGATRDALLCSLYLNPVR 98

Query: 96  VTMPTTCCT-LKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
            T+  T  T + ++ L   LI  LA       A      ++  L   LP  P   + +P 
Sbjct: 99  CTLNWTEPTAVGVNGLLAHLIAYLAREDLADDARLRAEAVVLDLLHPLPALP---IDVPR 155

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
               ++R + + +   P +  +L   A    +S R L RL V++TGLSF +WR  ++L  
Sbjct: 156 PVDERVRAVADTLLADPSDSRSLEAHARSIGVSRRTLTRLFVRDTGLSFDRWRTHMRLRA 215

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           AL  L +G  V +V+HT+GY + +AF+  F++ +G +PGRY+
Sbjct: 216 ALPLLAEGRPVSQVSHTVGYATPSAFLAAFRRTVGTSPGRYL 257


>UniRef50_Q0BZS2 Transcriptional regulator, AraC family n=1 Tax=Hyphomonas neptunium
           ATCC 15444 RepID=Q0BZS2_HYPNA
          Length = 260

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 109/220 (49%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H + QL+ A  G ++   +   +++PPQ AVWIP  V+H         L  L+I+P  
Sbjct: 39  HSHERIQLLYACSGVMSVVTDKTSFVIPPQRAVWIPSQVQHEVSCRGPVSLRTLYIDPRY 98

Query: 96  VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVS 155
                 C  +++  L R LIL +         +    +++ +L  EL   P+     P+ 
Sbjct: 99  ERDDPDCHIVEVGQLLRALILEVTQFEHDYDLQGREGQIVSLLVSELLASPKVPYAAPMP 158

Query: 156 SHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMA 215
           + P++  +   + + P +   + QWA    MS R+  R   +ETG+    WRQQ++L+ A
Sbjct: 159 TDPRLVRVCREIIEHPSDQRDIDQWADIAGMSRRSFTRAFKRETGMGVALWRQQVRLLEA 218

Query: 216 LQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           L  L  G +V  VA  +GYDS +AF  MF++  G +P RY
Sbjct: 219 LSLLSTGSSVTSVAMDVGYDSASAFCAMFQRAFGVSPSRY 258


>UniRef50_A1K8N6 Putative AraC-family transcriptional regulator n=1 Tax=Azoarcus sp.
           BH72 RepID=A1K8N6_AZOSB
          Length = 261

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 112/228 (49%), Gaps = 10/228 (4%)

Query: 34  PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93
           P H H  GQL   + GA+   V  + W+VPP  A+W+P GVEH   +  +  L  + +  
Sbjct: 34  PWHSHPWGQLAYPVSGAVCMDVPGSRWLVPPFRALWVPPGVEHQQSMLGHVRLRVVHVAE 93

Query: 94  SAVTMPTT-CCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV---LFDELPQQPQQQ 149
               +P + C  L+I+PL RELI  L  R       P + R  Q+   L  EL Q     
Sbjct: 94  GCAALPESHCAVLEITPLLRELIEALLPRP------PQSERRTQIQALLLTELSQARTLN 147

Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209
           L LP  S  ++  + E +   P +   L +WA     S R LARL   E G+SF  WRQQ
Sbjct: 148 LRLPQPSDRRLAALCEALMADPADNAPLTEWARRVGASGRTLARLFQSEMGMSFGLWRQQ 207

Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           ++L  A   + +G    ++A  LGY S +AF  MF++  G +P  + A
Sbjct: 208 VRLTHATVLVAQGRPYAEIAAELGYASPSAFSAMFRRAFGCSPRAFYA 255


>UniRef50_B7GXZ6 Bacterial regulatory helix-turn-helix protein, AraC family protein
           n=12 Tax=Acinetobacter RepID=B7GXZ6_ACIB3
          Length = 262

 Score =  127 bits (320), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 119/229 (51%), Gaps = 6/229 (2%)

Query: 33  SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92
           +P H H + Q + A  G I     N +W+VPP  A+WIP  VEHS    ++ +L    +E
Sbjct: 27  TPTHTHTRAQFLYASTGNIQVFTPNHVWIVPPMCALWIPANVEHSVISLSHVKLNTALVE 86

Query: 93  PSAVT-MPTTCCTLKISPLCRELILTL-----ANRTTTQRAEPMTRRLIQVLFDELPQQP 146
            +A   M   C  +++S L  EL++ L          T  ++ ++R L  ++F+E+ +  
Sbjct: 87  VNAAARMGQHCFIIRVSNLLHELLIRLNEIEREETPNTATSQELSRSLQILIFEEIQRAN 146

Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206
              + +P     ++  + + +   P     L  WA     S R L R+  KETGLS+R W
Sbjct: 147 LLPIQIPWPKDKRLLKICQELLHTPNHSRDLTDWADDIGASSRTLMRMFQKETGLSYRAW 206

Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            QQ+ + +AL  +  G ++ +++ +LGY + +AF  MFK+ LG+TP ++
Sbjct: 207 VQQMHIALALSKIANGKSIAQISESLGYTNPSAFSAMFKRHLGKTPQQF 255


>UniRef50_A1VPE7 Transcriptional regulator, AraC family n=2 Tax=Comamonadaceae
           RepID=A1VPE7_POLNA
          Length = 280

 Score =  126 bits (317), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/254 (35%), Positives = 127/254 (50%), Gaps = 20/254 (7%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
           EP  H  A +A+C   G  ++T+   Q R  Q   A    ITC       ++PP  AVWI
Sbjct: 40  EPHTHAWAQLAYCA-TGVVQVTA--EQTRPDQ---AQADEITC-------IIPPSRAVWI 86

Query: 71  PGGVEHSNQVTANAELCFLFIEPSAVTMP--TTCCTLKISPLCRELILTLANRTTTQRAE 128
             G  H   V   AEL  L+++ SA T P    C  L +SPL REL+ +L + +     E
Sbjct: 87  APGARHHITVREAAELRTLYLDASA-TPPGWQGCRVLVVSPLLRELVHSLDDGSGQPLTE 145

Query: 129 PMTRRLIQVLFDELPQQPQQQLHLPV----SSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184
             T+ L  ++ DE+     Q L +P+    S   ++R + E + + P E   L  WA   
Sbjct: 146 ARTQWLSALVLDEITHADIQALGVPMPHPDSGDKRLRALCEAVLRAPSERATLAGWAADI 205

Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244
             SER +ARL   + GLS++QWRQQ  L  AL  L +G  V  VA   GY S +AF  MF
Sbjct: 206 GASERTVARLFRDQLGLSYQQWRQQAILAHALPMLARGQPVGAVAAASGYASESAFSAMF 265

Query: 245 KKGLGQTPGRYIAR 258
           K  +GQ P ++ A+
Sbjct: 266 KAAMGQPPSQFHAK 279


>UniRef50_Q28MP8 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1
           RepID=Q28MP8_JANSC
          Length = 270

 Score =  125 bits (315), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 116/243 (47%), Gaps = 2/243 (0%)

Query: 20  VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79
           V +     TD L  P H H K QLI A+ G +      + + +PP  A+ +P    HS  
Sbjct: 27  VGYAKDYPTDHLALP-HTHPKAQLIYAVSGVMHVDTGTSSYTLPPTTALLMPANRAHSIY 85

Query: 80  VTANAELCFLFIEPSAVTMPTTCC-TLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL 138
           +     +  LF++    ++  + C  + +S L +ELIL   +             ++ + 
Sbjct: 86  MDGPVAMRALFLQQKQPSVDLSACKVVSVSALLKELILAACDEPVEWEQTGRAPHIVALA 145

Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198
             E+ Q     L LP+ + P+I  + + +   P +  +L  WA F   SER LARL  KE
Sbjct: 146 LHEIAQAVNLPLGLPLPTDPRIARVTDALRMRPADSRSLQDWALFAGASERTLARLFRKE 205

Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           TG++F QWR Q +L  AL  L +G T+   A   GYDS  AF   F++  GQTPG   A+
Sbjct: 206 TGMTFNQWRGQARLTAALSALSQGRTLAHAAAVAGYDSQPAFGAAFRRAFGQTPGEARAQ 265

Query: 259 LTT 261
             T
Sbjct: 266 HAT 268


>UniRef50_A1BBK0 Transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria
           RepID=A1BBK0_PARDP
          Length = 262

 Score =  125 bits (315), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 105/223 (47%), Gaps = 1/223 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           HQHR+ QLI A  G I      A W+VPP   VWIP    H  ++  +  +  L+IEP A
Sbjct: 32  HQHRRAQLISAATGVIVLATPEATWVVPPNRGVWIPPATRHHVRIVGDVGMQSLYIEPGA 91

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           V  MP+ C  L IS L R LI    N             L++++  E+   P   L LP 
Sbjct: 92  VPGMPSHCQVLGISALMRSLIAEALNLPLEYDQHGRDGVLMELIRLEMGGLPALPLSLPF 151

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
            S P++       A+ P        W+    MS R+  R   +ETG SF  WRQQ  L+ 
Sbjct: 152 PSDPQLSRRCRAFAEKPAIHETTDDWSRALGMSRRSFTRFFRRETGASFMAWRQQACLLY 211

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           A+  L  G+ V  VA  LGY++  AF  MFK+  G  P  Y+ 
Sbjct: 212 AMPRLAAGEAVTTVAMDLGYENPAAFTIMFKRTFGSPPLAYLG 254


>UniRef50_C5CUS1 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus
           S110 RepID=C5CUS1_VARPS
          Length = 280

 Score =  125 bits (315), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 118/230 (51%), Gaps = 13/230 (5%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
           +HQH   QL  +  G I  + ++  ++VPP  AVW+P  + HS  +  +AEL  +++   
Sbjct: 45  LHQHPWPQLTFSTRGVIRLSTQDGSYIVPPSRAVWVPANMPHSIMLIEDAELRTVYLHAW 104

Query: 95  AVTMPTTCCTLKISPLCRELILTL---------ANRTTTQRAEPMTRRLIQVLFDELPQQ 145
                  C  L+ISPL R L+L L         A+    QR     R +  +L DEL + 
Sbjct: 105 LGPPWEKCEVLEISPLLRALMLALDTTPDGLPPADPHAPQR----ERMIAPLLVDELERA 160

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
            Q ++ +P+ S  ++R + E + + P +   L + A     SER +ARL   + G+S++Q
Sbjct: 161 TQIRIDVPLPSDKRLRQLCETLLRNPADRATLAERAAAIGASERTVARLFRDQLGMSWQQ 220

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           WRQQ  +  AL  L +G  V +VA   GY + +AF  MFK   G++P  +
Sbjct: 221 WRQQAVMAHALPLLARGMAVSQVAAASGYATDSAFCAMFKAATGRSPTSF 270


>UniRef50_A8GH45 Transcriptional regulator, AraC family n=18 Tax=Enterobacteriaceae
           RepID=A8GH45_SERP5
          Length = 257

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 114/222 (51%), Gaps = 3/222 (1%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS--NQVTANAELCFLFIEP 93
           H+H  GQL+    G +   +    ++ PP++ +W P  +EHS  NQ  A   +  + + P
Sbjct: 34  HRHSWGQLMWVKAGVMVLRIGGQRFLAPPEFVLWAPAEIEHSCYNQRLAQCRMVDIAL-P 92

Query: 94  SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153
               MP   C + ++P+ R +      R           RL + L D+L   P QQ +LP
Sbjct: 93  LCAGMPVDPCLVSVTPIFRAIAEDFYARKQYIPQSKQDLRLCRALIDQLHLSPVQQTYLP 152

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
            S    +  ++E +   P +  +L  WA     +ER L+R   ++ G+SF +WRQ+L+ +
Sbjct: 153 SSEDKFLAPVLEALEHCPSDNTSLAAWAARVYTTERTLSRRCQQDLGMSFSEWRQRLRFL 212

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            A+  L +G TVQ+VA  +GY S +AFI MF++  G TP R+
Sbjct: 213 HAVSLLEQGKTVQEVALEVGYSSASAFIVMFQQIAGTTPERF 254


>UniRef50_Q8EHW8 Transcriptional regulator, AraC/XylS family n=3
           Tax=Gammaproteobacteria RepID=Q8EHW8_SHEON
          Length = 259

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 118/239 (49%), Gaps = 1/239 (0%)

Query: 18  AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77
           A + F   A      +P H+H  GQL L   G +        ++ P QYA+W+P GVEH 
Sbjct: 16  ADIFFNYEAFLPNTITPKHRHNWGQLQLISGGIMELHASGQRFLSPSQYAIWVPAGVEHE 75

Query: 78  NQVTANAELCFL-FIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136
           +    +   C L  +   A   P   C L ++P+ + ++  L  R          +RL++
Sbjct: 76  SYTRRSIHYCSLNIVANRAQVFPDVTCLLAVTPIAQAIVNDLRQRQVRVAQTDADKRLVE 135

Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196
           VL D+L     Q   LP S+   ++ +++ +   P    +L  WA     +ER LAR   
Sbjct: 136 VLIDQLILGQAQPQFLPSSTDKLLQPILQQLELEPASQKSLKSWASELHTTERTLARRCQ 195

Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
              G+SF + RQ+ + I +LQ L +G ++++VA TLGY+ T+ +I MFKK    +P +Y
Sbjct: 196 NCLGMSFTELRQRHKFIYSLQLLREGLSIKEVALTLGYNQTSPYIVMFKKYAQYSPEQY 254


>UniRef50_B4SQ42 Transcriptional regulator, AraC family n=5 Tax=Xanthomonadaceae
           RepID=B4SQ42_STRM5
          Length = 293

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 116/226 (51%), Gaps = 5/226 (2%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL---CFLFIE 92
           H H++ QLI    G +T    +  W + P  A W+P    H+  VT +  L         
Sbjct: 48  HHHQRAQLICVERGLLTTRTSHGTWSLAPGSAGWMPPLEPHT--VTLDGPLRGWGMALAA 105

Query: 93  PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152
           P+   +P+  C L +S L + L   +          P  + +I VL DE+   P+Q++HL
Sbjct: 106 PACAALPSDPCVLGLSKLAQALADRICEWPLGYATTPERQHIIDVLLDEIRTAPRQRMHL 165

Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212
           P+    ++  +   +   P +  +L +WA +  +S R+L R    ET LSF QWRQQ +L
Sbjct: 166 PMPHDRRLLKIASQLLADPSDERSLAEWAHWAGLSPRSLTRHFRDETTLSFAQWRQQARL 225

Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
             AL+ L  G +V  +AH LG+ S +AF+T+F++  G  PGRY+AR
Sbjct: 226 SEALRQLTDGRSVADIAHALGFSSASAFVTVFRRHFGLPPGRYLAR 271


>UniRef50_B7GW45 Bacterial regulatory helix-turn-helix protein, AraC family protein
           n=13 Tax=Acinetobacter RepID=B7GW45_ACIB3
          Length = 264

 Score =  124 bits (311), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 118/236 (50%), Gaps = 4/236 (1%)

Query: 22  FCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT 81
           F +     E   P H H  G+ I A  G +   ++   ++ PP Y +W+P   +HS    
Sbjct: 26  FRVRNAPAETVYPQHAHAWGEFIYAFSGVLEVNIDQINYLTPPPYGIWLPPYTKHSGINR 85

Query: 82  ANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTL-ANRTTTQRAEPMTRRLIQVLF 139
                  L++  S    +P     L  SPL   L+  L  N     + E +  RL+QVL 
Sbjct: 86  NEVTHATLYVHESLCQKLPQKAGILLTSPLVPALLDHLRQNPQDETQVEYI--RLLQVLL 143

Query: 140 DELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKET 199
           D+L Q      +LP + HP +  ++  + + P +   L + A    M+ER LAR   KE 
Sbjct: 144 DQLIQAELVGSYLPTTDHPALAKILNDLHQCPADNSTLQELAERINMTERTLARYSQKEL 203

Query: 200 GLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           G+S  +WRQ+L+++ A+  L +G T++ +A  LGY S +AFI MFK+ +G TP ++
Sbjct: 204 GMSLHEWRQRLKVMKAMTMLNQGKTIESIAFDLGYASASAFIYMFKRWMGFTPDQF 259


>UniRef50_A3RTS8 Transcriptional regulator, AraC family n=4 Tax=Ralstonia
           solanacearum RepID=A3RTS8_RALSO
          Length = 365

 Score =  124 bits (310), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 9/229 (3%)

Query: 34  PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93
           P H H   Q+  +  G +     +  W+VPP  A+WIP G+ H   V   A L  L+I+P
Sbjct: 134 PRHTHAWAQVAYSHTGVLRVQAGDTAWVVPPSRAIWIPPGIVHEVWVVEAAFLRTLYIDP 193

Query: 94  SAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152
           S VT     C  +++SPL RELI  +  R     A      L  ++ DEL +     L L
Sbjct: 194 SVVTDALAQCRVMEVSPLLRELIAAMDVRRPLAPAREQA--LATLILDELRRSAPLPLDL 251

Query: 153 PVSSHPKIRTMVE--MMAKG-PVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209
           P+ +  ++R + E  M   G P+ + AL +  G    S R LAR    E G++F QWRQQ
Sbjct: 252 PMPADKRLRALCERVMADPGTPLTFDALAREVG---ASTRTLARRFRDELGVNFSQWRQQ 308

Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
             L  A+  + +G  + ++A  LGY+S +AF  MF++  GQ+P  ++ R
Sbjct: 309 AVLASAIPLMSQGLPLSRIAQELGYNSQSAFSAMFRRAFGQSPSAFLHR 357


>UniRef50_Q11FA3 Transcriptional regulator, AraC family n=1 Tax=Chelativorans sp.
           BNC1 RepID=Q11FA3_MESSB
          Length = 258

 Score =  124 bits (310), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 111/226 (49%), Gaps = 1/226 (0%)

Query: 34  PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93
           P+H H   Q + A  G +  T+E A +++ P+ A+WIP GV H+    ++ E   L++E 
Sbjct: 33  PMHTHPWNQFVYATTGTLMVTIEQARYVITPEQAIWIPTGVRHTTTALSDVEFRNLYVED 92

Query: 94  -SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152
              + MP  C  L +S L R LIL LA              L  V+  ++ +  +    L
Sbjct: 93  LPNLNMPADCSVLAVSTLLRSLILELAEVEQKSDHSEYRDHLDAVILVQMSRLRKLDFFL 152

Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212
           P      +R + E++   P E   + +WA    MS R L+R    ETG+S R WR +L++
Sbjct: 153 PWPHSSHLREICEVLYAHPDEPRDITEWASRAGMSARTLSRHFNAETGMSLRVWRHRLRV 212

Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
             A++ L     V  +A  LG+ S +AF   F+  +G +P  +IAR
Sbjct: 213 FRAVELLSAHWRVTDIALELGFSSASAFTYAFRTEMGCSPTEWIAR 258


>UniRef50_D2BBL9 Transcriptional regulator, AraC-family n=18 Tax=Actinomycetales
           RepID=D2BBL9_STRRD
          Length = 278

 Score =  124 bits (310), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 119/238 (50%), Gaps = 13/238 (5%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI---- 91
           H H + Q++ A  G ++ T +   W+ P   A+WIP G  H ++   + +L  + +    
Sbjct: 26  HWHDENQIVYAGRGVLSVTTDAGSWIAPAIRAIWIPAGTVHEHRAYGDTDLHLVGLPVKD 85

Query: 92  EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151
            P  +  P     + + PL RELI+T   +     AE   RRL  VL D L    QQ +H
Sbjct: 86  NPLRLDQP---AVISVGPLLRELIITYTEQPADLTAE--RRRLRAVLLDRLRHSAQQPVH 140

Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211
           +P +  P++  +  ++   P +   L +      +S+R L RL   E G+SF QWR QL+
Sbjct: 141 VPAARDPRLVAVCAILRDNPADNRTLARLGAVAGVSDRTLTRLCRAELGMSFPQWRTQLR 200

Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSAKP 269
           L  AL  L +   V  VAH  G+ S++AFI +F++  G TPG + A    +SP +  P
Sbjct: 201 LHYALLLLAEDTPVTAVAHRCGWASSSAFIDVFRRAFGHTPGTHRA----LSPTATAP 254


>UniRef50_A0KTL0 Transcriptional regulator, AraC family n=25 Tax=Gammaproteobacteria
           RepID=A0KTL0_SHESA
          Length = 292

 Score =  124 bits (310), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 123/231 (53%), Gaps = 12/231 (5%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
           +H+H   QLIL L G +      AL++VP   A+++P GV H +   A  + CF+ +  +
Sbjct: 57  LHKHCWHQLILPLQGLLQTEANGALFLVPHTTALFVPAGVIHES--VAITDTCFIGVYLN 114

Query: 95  AVTMPTTCCTLK---ISPLCRELILTLANR---TTTQRAEPMT----RRLIQVLFDELPQ 144
            +       T+K   +S   REL+LT+  +    T+   EP+     +RL++VL+D++  
Sbjct: 115 PMCGRDYGATIKPVAMSAFLRELVLTIRKQCVFNTSMNVEPIALPTIQRLLEVLYDQINS 174

Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204
              Q   L +    +++ + E + + P    +L +W      SER L+RL V+E G SF 
Sbjct: 175 AEGQTFKLLIPQDRRLKLIFEHLTQTPALDLSLAKWGEMVGASERTLSRLFVREFGSSFG 234

Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            WRQ L+LI +L  L    ++Q VAH +GY + +++I  FK+  G TP R+
Sbjct: 235 LWRQHLRLIYSLSLLATNLSIQNVAHQIGYQNDSSYIKAFKERFGMTPQRF 285


>UniRef50_UPI00019092C6 AraC family transcriptional regulator n=1 Tax=Rhizobium etli CIAT
           894 RepID=UPI00019092C6
          Length = 283

 Score =  124 bits (310), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 104/221 (47%), Gaps = 1/221 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS- 94
           H+HR+GQL+ A  G I  T     W++PP   +WIP GV HS +      +  L++E   
Sbjct: 5   HEHRRGQLMNATSGLIVLTTPEGKWVMPPHRGMWIPAGVRHSVRAGGLVRMQSLYVETDR 64

Query: 95  AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           A  MP  C  L+I+   R LI  +   +     +  ++ L+ +   E+ + P   L LP 
Sbjct: 65  AEAMPVHCQVLEITTFMRSLIGEVVGLSLDTEVDGRSQALMDLTLYEMERLPSLPLSLPF 124

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
            S  +           P        W+    MS R   R+  ++TGLSF  WRQQ  L+ 
Sbjct: 125 PSDERFAKKCREFVGQPNIHQTTDDWSRELGMSRRAFTRMFRQQTGLSFVGWRQQACLLS 184

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           AL  L  G +V  VA  LGY++  AF  MFK+  G+ P  Y
Sbjct: 185 ALPQLSAGQSVTSVAMELGYENPAAFTIMFKRAFGKPPLAY 225


>UniRef50_B0VLM5 Putative transcriptional regulator (AraC family) n=1
           Tax=Acinetobacter baumannii SDF RepID=B0VLM5_ACIBS
          Length = 275

 Score =  123 bits (309), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 3/226 (1%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
           +HQH +GQLI A  G +  + E  LW++PP++ VWIP    H      +  L  L+I+  
Sbjct: 40  LHQHERGQLIYATSGIMELSTEEELWLIPPRFGVWIPAYTPHQMTTKTDVHLNTLYIDTY 99

Query: 95  --AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152
             +   P   C + +S L  EL++  A+         +  + + +L +EL       L  
Sbjct: 100 RWSKPFPDKPCGVTVSGLLHELLIRAASFPIEYPLHSVEWKTMDLLVEELKWTKGISLMT 159

Query: 153 PVSSHPK-IRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211
           P     K ++ +  ++   P +  +L +W+     + R L+RL  +E   +F  WRQQL+
Sbjct: 160 PEPYMDKRLQDLCNILIINPADNHSLEEWSSQVGATTRTLSRLFKQEMNTTFTLWRQQLR 219

Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           ++ A+  L+ G  +  ++  LGY S + F  MFKK +G+TP  YIA
Sbjct: 220 IVHAIPSLMAGKPISDISQELGYSSQSTFTVMFKKIMGKTPTEYIA 265


>UniRef50_B1JGH9 Transcriptional regulator, AraC family n=26 Tax=Enterobacteriaceae
           RepID=B1JGH9_YERPY
          Length = 261

 Score =  123 bits (309), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 112/221 (50%), Gaps = 1/221 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H  GQLI    G +  ++    ++ PP++ VW+P G+EHS+          + I    
Sbjct: 33  HTHPFGQLICVKSGVLAMSIGGQRFLAPPEFIVWVPAGMEHSSYNRKPMHFRAIDIALDF 92

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
            T +P +   + +SP+   ++     R          RRL  VL D+L   P Q+ +LP 
Sbjct: 93  CTELPASPGLMNVSPIFNAIVEDCFTRDLLMPETQQDRRLAHVLIDQLKVSPVQRTYLPT 152

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
           S    +  ++  + + P +  +L  WA     +ER L+R   +E G++F +WRQ+L+ + 
Sbjct: 153 SQDKLLSPILAALERCPADSTSLALWAKRVYTTERTLSRRCQQELGMAFSEWRQRLRFLH 212

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           A+  L +G TV  VA  +GY S +AFI MF++  G TP R+
Sbjct: 213 AISLLEQGKTVNSVALDVGYSSASAFIAMFQQISGTTPERF 253


>UniRef50_Q1ZB18 Transcriptional Regulator, AraC family protein n=1
           Tax=Photobacterium profundum 3TCK RepID=Q1ZB18_PHOPR
          Length = 259

 Score =  123 bits (309), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 120/234 (51%), Gaps = 5/234 (2%)

Query: 25  HAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANA 84
           H+GT  L    H H  GQ   A+ G +        ++ PPQYA+W+P GVEH    +  A
Sbjct: 29  HSGTQTLW---HSHAWGQWSYAIKGVLVVHTHAGRFVAPPQYAIWVPEGVEHQVISSGAA 85

Query: 85  ELCFLFIEPSAVTMPT--TCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDEL 142
           ++  L+I   ++        C  ++S L +ELIL      +  +      RL  VL D L
Sbjct: 86  QMRSLYIRTGSLINLCWHNACVCEVSSLAKELILRFGCFDSEYKLNGKENRLANVLLDTL 145

Query: 143 PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202
              PQ Q  LP+ S  ++  + + +     E   + Q      +S R+++RL  +ETGL+
Sbjct: 146 DDLPQAQTQLPMPSDKRLLAIFDYLQVHTGEQINIDQIGHKVGLSGRSVSRLFKQETGLT 205

Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           F+QWRQ+L+L+ AL  L +   V +VA   GY+S +AF+  F K  G+TPG+Y 
Sbjct: 206 FQQWRQRLRLLSALNLLEQAMPVTQVAMECGYESLSAFVAAFGKQFGETPGKYF 259


>UniRef50_C3JKZ1 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus
           erythropolis RepID=C3JKZ1_RHOER
          Length = 267

 Score =  123 bits (308), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 114/233 (48%), Gaps = 8/233 (3%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H+HR+ Q + A++GA+    E+  W V P  AV IP GV H+  +   +    L+IEPSA
Sbjct: 32  HEHRRAQFLFAVNGAMNVETEDGEWTVLPSNAVMIPAGVAHAVTMDGVSTRS-LYIEPSA 90

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAE---PMTRR---LIQVLFDELPQQPQQ 148
               P  C  + +S L REL++   +       E   P   R   ++Q++  EL      
Sbjct: 91  APWFPVRCRVVAVSSLLRELLVAAVDMDVELNVEDDSPAHGRSAAVLQLILHELRDLAPL 150

Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208
            + LP+  HP +R +       P    +  +WA    +SER L RL++ ETG+S   W Q
Sbjct: 151 PVELPLPRHPGLRALCAQYLAAPSIHDSPTRWADRLHVSERTLHRLLISETGMSASSWMQ 210

Query: 209 QLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTT 261
           +  ++ AL  L  G +V  +A  LGY +  AF  M  +  G  P  Y AR+TT
Sbjct: 211 RACILHALPKLSAGASVTAIASELGYSTPAAFAAMCTRVSGAPPSSYRARVTT 263


>UniRef50_A5V470 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas
           wittichii RW1 RepID=A5V470_SPHWW
          Length = 261

 Score =  123 bits (308), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 105/221 (47%), Gaps = 1/221 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H+HR+GQLI A  G +  +    +W+ PP+ AVW PGGV H+ ++        + IEP A
Sbjct: 32  HRHRRGQLIYAARGVVVVSTAQGVWVAPPERAVWTPGGVSHAVRMVGAVSTRSVLIEPDA 91

Query: 96  -VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
             ++      +++SPL R L+                  ++ +L  EL + P   L +P 
Sbjct: 92  HGSLGDANKVIQVSPLLRSLLAAACEIDPEYDVAGRDGMVMALLLAELARAPSVSLAVPF 151

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
               +I    +     P     +  W+    M  R   RL  ++TGLSF  WRQQ  L++
Sbjct: 152 PKKAEIARKCQAFLDAPSPHDTIDMWSAELGMGRRAFTRLFRQQTGLSFGAWRQQACLLI 211

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           AL  L  G+ V  +A  LGY+S  AF TMFK+  G  P  Y
Sbjct: 212 ALPRLAAGEAVTTIALDLGYESPAAFTTMFKRLAGVAPSHY 252


>UniRef50_A6WQB9 Helix-turn-helix-domain containing protein AraC type n=4
           Tax=Shewanella baltica RepID=A6WQB9_SHEB8
          Length = 305

 Score =  121 bits (303), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 118/229 (51%), Gaps = 9/229 (3%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H  GQ+I A  G ++       ++VPP+ AVW+P  V+H        +L  L+++ + 
Sbjct: 55  HSHPWGQVIYASQGVLSVITPAGRYIVPPEQAVWVPPFVDHEVIALGQVQLSSLYLDETQ 114

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRA---EPMTR----RLIQVLFDELPQQPQ 147
           +   P  C  L + P+  +L+L  AN      A   EP  +    RL+ V+ D +   P+
Sbjct: 115 IGGFPPDCTCLSVKPVL-QLLLQEANALMKSEAGLIEPDDKDSVMRLLMVIRDFMVLAPK 173

Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207
             L LP     K+  + E +   P E   L  W      S R LARL  ++TGLS+ QW 
Sbjct: 174 VALDLPYPKDKKLLRITEALLADPSEQRTLVDWQREVGASARTLARLFKQQTGLSYSQWL 233

Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           Q+L+L +A+Q L +G++V   A +LGY S +AF  MF++ +G  P +Y+
Sbjct: 234 QRLRLQVAIQMLSRGESVLTTALSLGYASGSAFGYMFRQLMGVAPSQYL 282


>UniRef50_A8GAI3 Transcriptional regulator, AraC family n=2 Tax=Serratia
           RepID=A8GAI3_SERP5
          Length = 257

 Score =  120 bits (301), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 110/235 (46%), Gaps = 12/235 (5%)

Query: 33  SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92
           +P HQH +GQL L  HG I    +   W +      W+P    H      N     L++ 
Sbjct: 16  TPWHQHTRGQLYLLTHGMIALETQEQQWAMTAGSIGWLPANCAHQALACGNVAGWSLYLP 75

Query: 93  PSAVTMPTTCCTLKISP---LCRELILTLANRTTT---QRAEPMTRRLIQVLFDELPQQP 146
            S       C  L   P       LIL L  R      QR     RRL+QVL DE+  Q 
Sbjct: 76  GS------LCADLPKQPHLSTASGLILALVERLAQFAGQRLNAPQRRLLQVLLDEMCAQE 129

Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206
              L LP+    ++  +   +   P    +  +WA +  +S R L+R  + ETG++F +W
Sbjct: 130 STPLQLPLPQDARLLKIARALLNEPASERSQSEWAAWTGLSVRTLSRHFISETGVTFARW 189

Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTT 261
           RQQ +++ +L+ L +G+ + ++A   GYD+ +A+I  F++  G TPG Y  +  T
Sbjct: 190 RQQARVLRSLEPLSRGEAINQIAGDCGYDNVSAYIAAFRQRFGTTPGLYFVQRET 244


>UniRef50_Q0TI30 Transcriptional regulator, AraC family n=14 Tax=Enterobacteriaceae
           RepID=Q0TI30_ECOL5
          Length = 271

 Score =  120 bits (301), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 116/234 (49%), Gaps = 5/234 (2%)

Query: 32  TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL-CFLF 90
           T P H+H   QL+    G +      ++W+V    A+W+P  + H    T N  L   L 
Sbjct: 27  TVPWHKHLYAQLLYPAEGVVRIWAGESVWLVHASSALWLPPQMPHKFVATGNVLLKTVLV 86

Query: 91  IEPSAVTMPTTCCTLKISPLCRELILTLA----NRTTTQRAEPMTRRLIQVLFDELPQQP 146
            E  + T+   C    ISPL REL++ +     +++TT + +     L  ++  E+    
Sbjct: 87  SEAESETLGKVCFMTGISPLLRELLIAINQLPPSQSTTDKQQLRFSALETLILQEIKMGV 146

Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206
           +  L LP  +  +++ + E +         L   A    +S R L RL VKETGL+FR W
Sbjct: 147 KMSLELPWPNDERLQQLCENLLNNQGYLPTLDNLADKINVSSRTLMRLFVKETGLTFRHW 206

Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260
            QQ+ +I A+  L  G ++ K+AH LGY S  +F  MFK+  G +PG++  RLT
Sbjct: 207 VQQMHVISAVTLLDDGYSLTKIAHRLGYASAESFGNMFKRRTGYSPGKFTRRLT 260


>UniRef50_A9IA98 Transcriptional regulator, AraC family n=1 Tax=Bordetella petrii
           DSM 12804 RepID=A9IA98_BORPD
          Length = 243

 Score =  120 bits (300), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 119/227 (52%), Gaps = 10/227 (4%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H +GQL+ A  G +        W + P+ A+WI  GV+H   +     + +L IEP A
Sbjct: 16  HSHEQGQLVHATSGVVRVLTSQGGWTLAPRQALWIAPGVDHELHMIGQVAMRWLRIEPDA 75

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH--L 152
              +   C  ++++PL RELIL +         E     ++ +L  +L Q+ +  +H  L
Sbjct: 76  APWLWAECRQIRVTPLLRELILKMLQDPPVYPPESNAAMIVPLLLRQL-QEAEVIVHGKL 134

Query: 153 PVSSHPKIRTMVEMMAKGPVE---WGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209
           P+    ++  + E++ + P        LG+ AG    S R L+RL  ++TGL+F QWRQQ
Sbjct: 135 PLPRDKRLLKVCEVLIRSPANNDPMALLGERAG---TSVRTLSRLFKEQTGLTFVQWRQQ 191

Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           L+L  A+  L  G +V  VA  +GY +  AF TMF++ LG TP RY+
Sbjct: 192 LRLSEAVCQLSLGQSVSSVAQDMGYATANAFSTMFRRTLGATPQRYM 238


>UniRef50_A0KEB0 Transcriptional regulator, AraC/XylS family n=25 Tax=Proteobacteria
           RepID=A0KEB0_AERHH
          Length = 274

 Score =  120 bits (300), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 136/247 (55%), Gaps = 4/247 (1%)

Query: 10  YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69
           ++PD+H  +A+      G  +  S  HQH++ QL+ A  G +T  +++ + ++PP  A W
Sbjct: 10  FDPDQHDGSAIGIASALGWHD--SGRHQHKRHQLLFAQAGCMTIELDDQVCLLPPTRAAW 67

Query: 70  IPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129
           +P G+ H   +        L+ +P    +PT    L ++PL RE+I  +A     + A  
Sbjct: 68  LPAGLPHRVLMRGVVAYRSLYFQPEP-GLPTEMAVLAVNPLLREIIERMAIWPWDKPAAE 126

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
               L  +L +EL Q P++   LP+ S P++   ++ + +G      L + A     S++
Sbjct: 127 QHCTLA-LLQEELAQAPRESWQLPLPSDPRLAGWLQEVKRGDTLPDRLNRLAERVGASDK 185

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
            + R+ ++ETG+S++ WRQQ +L+ AL+ L + + + +VA TL + S +AFI+ F++  G
Sbjct: 186 TIGRIFMRETGMSYQAWRQQWRLLRALELLAEAEPISRVAATLEFASDSAFISFFRQHTG 245

Query: 250 QTPGRYI 256
           QTP RY+
Sbjct: 246 QTPLRYL 252


>UniRef50_A9HXG4 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria
           RepID=A9HXG4_BORPD
          Length = 284

 Score =  119 bits (299), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 110/229 (48%), Gaps = 2/229 (0%)

Query: 29  DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88
            E T P H H +GQL+ A+ G +  +  +  W +P   A+W+P G  H  Q+     +  
Sbjct: 53  SETTGP-HSHPRGQLVYAIEGVMRVSTPDGFWTLPSLRALWVPPGTVHGIQMVGKVSMRT 111

Query: 89  LFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147
           L++  +A  ++   C  +++S L RELIL L         E    ++  +L  EL   P 
Sbjct: 112 LYVHANAANSLWDRCQVVEVSGLLRELILALTAEPIEYALEGRGGQIATLLLTELKAAPV 171

Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207
             + +P     +++T+   +   P     +  W      S R L RL   E GL++RQW 
Sbjct: 172 IPIRIPWPQDRRLQTVCRAILAQPGLARTVDDWGDEVGASGRTLIRLFQAEVGLNYRQWV 231

Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           QQ++L  AL  L  G  V +VA  LGY S +AF  MF++ LG  P  Y+
Sbjct: 232 QQVRLAEALHRLSLGQPVARVAAELGYRSPSAFSAMFRRALGSPPQAYL 280


>UniRef50_C3JM12 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus
           erythropolis RepID=C3JM12_RHOER
          Length = 278

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 115/234 (49%), Gaps = 9/234 (3%)

Query: 28  TDELTS-PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL 86
           TD +T  P H H + +LI +  G +   +EN LW V P   +WIP GV H  Q  AN  +
Sbjct: 47  TDHITRWPEHAHVEHELIWSDRGVVNMIIENQLWTVTPGVGLWIPRGVLHEGQ--ANPHV 104

Query: 87  CF---LFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELP 143
            F   LF            C + +S   R L++ LA+  T   AE    R  QV  D L 
Sbjct: 105 AFRATLFTPELWTPAWNEPCIVTLSEAARALLIHLAH--TGMPAE-QRLRAQQVCVDLLT 161

Query: 144 QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203
                   +P+   P++R +V+ +   P +  +L QWA    +S R + R+   E  LSF
Sbjct: 162 PASAPHFDVPIPRDPRLRMLVDKVLSDPADDRSLDQWAHVLNLSRRTVTRIFAAELALSF 221

Query: 204 RQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
            QWR  +++  AL  L  G +V  V+  +GY ++++FI  F+K +G TPG  +A
Sbjct: 222 AQWRTLVRMSTALGMLGTGMSVNAVSRRVGYGTSSSFIAAFRKTVGYTPGNALA 275


>UniRef50_A8T3D4 AraC-type DNA-binding domain-containing protein n=5 Tax=Vibrionales
           RepID=A8T3D4_9VIBR
          Length = 266

 Score =  119 bits (297), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 118/234 (50%), Gaps = 2/234 (0%)

Query: 24  IHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTAN 83
           + A   +  S VH H K QLI + HG +T T+E+  +++PP  A WIP G  H+ Q T  
Sbjct: 22  VAAEISDHDSGVHFHAKDQLISSQHGCMTITLEDVKYVLPPMRAAWIPRGTSHNAQSTNV 81

Query: 84  AELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDEL 142
           A+   L+ +PS A  +P       ++PL R LI  ++      + E      + +  +EL
Sbjct: 82  AQYRSLYFDPSLASRLPRKIRIFDVTPLMRILIDRMS-FWPFDKPESEQINTLNLFIEEL 140

Query: 143 PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202
                  L LP+    ++++ +  +        +L + +     SE+ + R+  +ETG+ 
Sbjct: 141 NDSEDVYLQLPLPKDYRLQSWISKIDDEAFSAPSLAKLSQLVGASEKTITRIFNRETGMP 200

Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           ++ WRQQ +L+ A++ L  G  +  +AH L + S +AFI  F++  G TP  Y+
Sbjct: 201 YQSWRQQWRLLGAIELLSSGMRLSDIAHRLEFSSDSAFIYFFRQKTGTTPMSYL 254


>UniRef50_C9PF84 Transcriptional regulator AraC family n=1 Tax=Vibrio furnissii CIP
           102972 RepID=C9PF84_VIBFU
          Length = 248

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 115/230 (50%), Gaps = 3/230 (1%)

Query: 32  TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91
           T   H+H+  Q + AL+G I        W+V     +WIP GV HS ++T + ++  LF+
Sbjct: 18  TEAAHEHQCAQFLHALNGVIRVDTAAGTWVVTANKGMWIPAGVSHSLRITGHVKVRTLFV 77

Query: 92  EPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150
           +  A   +P TC   ++  L + LI+   +    + A     R+ +++ DEL +      
Sbjct: 78  DAMARADLPNTCVLSEVPSLLKHLIVEAVSLPEERIAGTREERIFELILDELRRLKPVDF 137

Query: 151 HLPVSSHPKIRTMVEMMAKGPVE-WGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209
           +LP  S   +  + + ++      W A    A +   SER ++R   +E GL+F +W +Q
Sbjct: 138 YLPNPSSDGLIMLCDYVSDRIAHPWTATDA-AKYLGQSERTVSRKFQQELGLTFTEWLRQ 196

Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
            +L+ AL+ L  G +V   A  +GYDS +AF  MFK  +G TP  Y A +
Sbjct: 197 KRLVHALELLASGHSVLDSALEIGYDSPSAFSAMFKSRIGLTPSEYTASI 246


>UniRef50_Q47Y50 Transcriptional regulator, araC family n=1 Tax=Colwellia
           psychrerythraea 34H RepID=Q47Y50_COLP3
          Length = 268

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 112/223 (50%), Gaps = 1/223 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H   QL  +  G +    +  ++++PP+ A+W+P G+ H +          L+ +P  
Sbjct: 45  HSHPWSQLSYSCVGVMHIETDAGIFVIPPEQALWLPPGMAHQHFCKNKVSYRSLYFDPVL 104

Query: 96  VTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
             M       L + PL + LIL ++N +        T+R + VL D L      +L +P 
Sbjct: 105 SEMLGDKVRPLTVDPLLKSLILEISNWSEDYEETEETQRFLLVLLDRLAIAKSNELFMPT 164

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
               ++  ++E + + P     + QWA     S R L RL  +  G+ F +W+Q+L+++ 
Sbjct: 165 IQDKRLFPIIETLNQEPANKLTIEQWALKVGASSRTLNRLFNQNYGMGFSRWKQKLRILK 224

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           +L+ L     +  +A  LGY+ST+AFIT FKK LG +P +Y+A
Sbjct: 225 SLELLNSNARLVDIAFELGYESTSAFITAFKKQLGCSPKKYLA 267


>UniRef50_C4XL68 AraC family transcriptional regulator n=2 Tax=Desulfovibrio
           RepID=C4XL68_DESMR
          Length = 350

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 105/223 (47%), Gaps = 1/223 (0%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
            H H  GQL  A  G I  T   +  + PP+ AVW+P G+ H    T  A +  L+I   
Sbjct: 32  AHSHPFGQLSYAGEGVIEVTTPVSSHVAPPRRAVWVPPGLLHEVTTTRPAAMRSLYIRAD 91

Query: 95  -AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153
             +  P  C  L+++ L RELIL  A        +    RL +VL D+L   P+  L LP
Sbjct: 92  QTIFCPPRCLVLRVTRLARELILAAAALPPAYDEDGSAGRLARVLLDQLAGLPEADLSLP 151

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
             + P +  +   +   P +   +   A    MS R LAR    +TGL F  WR++ +L+
Sbjct: 152 WPADPALAALCRELRDAPDDGRDMDALARQAGMSGRTLARRFEAQTGLRFGAWRRRQRLL 211

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
            AL  L  GD V   A   GY S +AF+  F+   G TPG ++
Sbjct: 212 AALGRLEAGDNVTTAALESGYASVSAFVAAFRDMFGATPGAFL 254


>UniRef50_Q7CRR0 Transcriptional regulator, AraC family n=4 Tax=Rhizobiaceae
           RepID=Q7CRR0_AGRT5
          Length = 284

 Score =  118 bits (295), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 112/223 (50%), Gaps = 1/223 (0%)

Query: 33  SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92
           +P H H + Q+  A  G +  +  +  WM+PP + + IP G++H  ++ +N E+  +++ 
Sbjct: 44  TPPHSHSRVQIWCARQGVVLVSTADGRWMIPPGHGLLIPAGLQHEAEIISNVEMHSIYVH 103

Query: 93  PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152
           P  +    +   ++I+ L   LI  L        A      +  +L DE+ + P++ L L
Sbjct: 104 PE-LFQAESPKVVEITDLASSLISELLAEEHQPSAFHRQGLVRALLLDEVNRLPERPLGL 162

Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212
           P   + ++  +     + PV    + +WA   ++S R+  RL  +E G+SF  WRQQ  +
Sbjct: 163 PFPDNQRLAALCRDFLRKPVARVEIDEWAAAMSISRRSFTRLFRRELGVSFVTWRQQACI 222

Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
             +L  L  G+ V  VA   GY++  AF TMF++ LG +P  Y
Sbjct: 223 FASLPRLAAGEAVTNVALDAGYENIPAFTTMFRRMLGSSPRAY 265


>UniRef50_B3Q9E6 Transcriptional regulator, AraC family n=2 Tax=Rhodopseudomonas
           palustris RepID=B3Q9E6_RHOPT
          Length = 286

 Score =  118 bits (295), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 116/231 (50%), Gaps = 5/231 (2%)

Query: 29  DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88
           +E TS  H HR+ Q IL + G      E   ++VPP + +WIP GV H ++     E   
Sbjct: 48  NESTSTRHLHRRDQFILQITGVTAMMTERGHFVVPPGHGLWIPAGVVHQSRAWGEVEAQT 107

Query: 89  LFIEPSAVTMPTTCCTLKISPLCRELILTLANRT---TTQRAEPMTRRLIQVLFDELPQQ 145
           +++ P+     +  C L  +    E ++  A R      Q     T  LI++L  E+ + 
Sbjct: 108 IYVTPNRERKASDTCRLIRASSLIEALMDEAVRIPEIYDQNGRDGT--LIELLLTEIARM 165

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
           P+  LH+ +   P++  + + +   P     L  WA    +S R L RL  +ETG SF  
Sbjct: 166 PEVTLHVQMPPDPRLAEICKAVLGDPSSNLTLDHWADKCGLSRRTLTRLFRRETGQSFSG 225

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           WRQ+++L+ AL  L  G+TV  VA  +GYDS +AF  MFK+ LG  P  Y+
Sbjct: 226 WRQRVRLLEALARLGAGETVTGVALDVGYDSPSAFAAMFKRELGSAPRHYL 276


>UniRef50_B1KGB7 Transcriptional regulator, AraC family n=2 Tax=Shewanella
           RepID=B1KGB7_SHEWM
          Length = 261

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 1/221 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H+H  GQ + A  G +      + ++VPP+  VW+     H     ++ EL   + + + 
Sbjct: 37  HRHTWGQFVYASRGVLAVATTVSRYIVPPEQGVWVTPNTCHEVTAISDVELTSFYFDNTV 96

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           ++  P  CC L +    + LI+   +         +  RL++++ D+L    +  L LP 
Sbjct: 97  LSGFPECCCVLNVEFFLKVLIVESKSIDGDYEWSGVDGRLLRLIRDKLIVAIKIPLQLPY 156

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
               ++  ++  +   P     L QW      S R L+RL   ETGL++ +WRQ+  + +
Sbjct: 157 PKDSRLLAILTQLQLEPSNRNNLVQWGNIVGASARTLSRLFKNETGLTYSEWRQRFNVQV 216

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           A+  L  G+TV  ++  LGY+S ++FI MF+K  G TPG Y
Sbjct: 217 AITKLSSGETVSNISLNLGYESPSSFIYMFRKLTGVTPGFY 257


>UniRef50_C9PF82 Substrate-binding transcriptional regulator AraC family protein n=1
           Tax=Vibrio furnissii CIP 102972 RepID=C9PF82_VIBFU
          Length = 274

 Score =  117 bits (294), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 116/241 (48%), Gaps = 2/241 (0%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
           H+A +   IH     +    H H   Q+I  L G +  ++EN   +VP    ++IP    
Sbjct: 12  HQAFITKTIHMRAGYIDD-FHTHPWHQIIFPLSGLLQSSIENRSVIVPHNAMLYIPADTV 70

Query: 76  HSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134
           H +    + +   +++ P S V       +  ++P  + LIL L NR+T  +       L
Sbjct: 71  HKSVSVTDTQFLAMYLNPKSGVNYGVEAKSCLVTPFLKALILLLFNRSTQAQPPENLIHL 130

Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
           + VL D++    Q  + L +    +++ + E +   P    +L +WA     SER L+RL
Sbjct: 131 LTVLRDQIDTAGQYAIPLLIPRDKRLKAIFEQLTAQPDVKFSLNEWAKHVGASERTLSRL 190

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
             KE   SF  WRQ ++L+++LQ L    T+Q +A  LGY S +A+I  FKK    TP +
Sbjct: 191 CAKEFDQSFSLWRQNVRLVLSLQLLSTPRTIQDIALELGYASDSAYIYAFKKLFHHTPSK 250

Query: 255 Y 255
           Y
Sbjct: 251 Y 251


>UniRef50_C1A6S8 AraC family transcriptional regulator n=1 Tax=Gemmatimonas
           aurantiaca T-27 RepID=C1A6S8_GEMAT
          Length = 286

 Score =  117 bits (294), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 115/236 (48%), Gaps = 6/236 (2%)

Query: 41  GQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI-EPSAVTMP 99
           GQLI A  GAI+  V  +LW+VP +  +W+P    H  ++     L  +FI    A  +P
Sbjct: 40  GQLIWASRGAISVMVGQSLWLVPARSGLWLPPATTHDVRMIGRGVLRLVFIARARARALP 99

Query: 100 TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPK 159
            T     ++PL RE++  +  R T   A+P   RL+ VL DEL +       LP+ + P+
Sbjct: 100 KTPAVRALTPLLREILRRVLARDTLTTADPRDGRLLGVLVDELSEVSPAPFDLPMPTDPR 159

Query: 160 IRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGL 219
                 ++ + P +       A     S R L R+   ETGL+F  WR + +L+ A+  L
Sbjct: 160 AIRAAALVREHPAQPPDAITIARHAGASVRTLERVFRAETGLAFGAWRLRARLMHAMILL 219

Query: 220 VKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI-----ARLTTVSPQSAKPD 270
             G++V +     G+  T+AF+  F++  G TPG Y      +R + VS Q+  P 
Sbjct: 220 ANGESVTRTGIAAGFAGTSAFVHAFRRTTGTTPGAYATPGVRSRTSPVSSQTGVPS 275


>UniRef50_B9JII8 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter
           K84 RepID=B9JII8_AGRRK
          Length = 276

 Score =  117 bits (294), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 120/257 (46%), Gaps = 11/257 (4%)

Query: 8   NGYEPDRH-HEAAVA-FCIHAGTDE--LTSPVHQHRKGQLILALHGAITCTVENALWMVP 63
           NG+E + H  EA+ A   +H+   +   T P H HR+ QL+    G I        WMVP
Sbjct: 14  NGHEQNMHWTEASNADVLVHSSEPQQGYTVPWHHHRRSQLLCVFAGVILILTTRGRWMVP 73

Query: 64  PQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCC-TLKISPLCRELILT---LA 119
           P +A++IP G+EHS ++ ++  +  +++ P            ++++ L R L+L    L 
Sbjct: 74  PGHALFIPAGLEHSVEMLSDVSMKSVYVMPHDPRQSDEAPRVVEVTDLARSLLLEAIRLR 133

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
                 R   +   L+      L ++P   L LP  S  ++  +       P     L  
Sbjct: 134 EAPVGNRKAELVLSLLLEEISTLEERP---LGLPFPSDRRLAALCRAYLANPTPNARLDD 190

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
           WA   AMS R   R   KETG+SF  WRQQ  +   L  L +G  V  VA   GY+S  A
Sbjct: 191 WAEKLAMSRRTFTRQFRKETGISFTTWRQQASVFACLPQLAEGQPVTNVALEAGYESAAA 250

Query: 240 FITMFKKGLGQTPGRYI 256
           F TMF++ LG +P  Y+
Sbjct: 251 FTTMFRRMLGTSPRTYM 267


>UniRef50_A6V354 Transcriptional regulator, AraC family n=3 Tax=Pseudomonas
           RepID=A6V354_PSEA7
          Length = 244

 Score =  117 bits (292), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 117/238 (49%), Gaps = 7/238 (2%)

Query: 23  CIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTA 82
           C H   +E+    H H + QLI A+ G +        W+VP  +A+W+P   EH  +++ 
Sbjct: 8   CDHHDGEEILP--HCHAQAQLIHAISGVMLVGAARRNWVVPAGHALWVPPNTEHQIRMSG 65

Query: 83  NAELCFLFIEPSAVTMPTT---CCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLF 139
           +  +  LF+   A T P     C  + +SPL REL++  +       +    R + ++L 
Sbjct: 66  SVRMRTLFM--PAATWPRDGEQCQVIAVSPLLRELLVAASEMHLGDSSAQRRRCIHELLL 123

Query: 140 DELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKET 199
            EL       +HL +   P++  +   +   P E   +  WA    MS R LARL  +E 
Sbjct: 124 VELDAAQTIGIHLVMPRDPRLLRLCSQVIGTPAEETRMEDWARQLNMSSRTLARLFQREL 183

Query: 200 GLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           G+SF  WR + +++++LQ L  G +V +VA   GY S +AF   FK+ LG +P  Y A
Sbjct: 184 GMSFGDWRTRARMVLSLQRLSAGASVLEVALEHGYQSPSAFSQTFKRTLGHSPSHYQA 241


>UniRef50_A9ILC9 Transcriptional regulator, AraC family n=3 Tax=Bordetella
           RepID=A9ILC9_BORPD
          Length = 308

 Score =  116 bits (291), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 1/229 (0%)

Query: 31  LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLF 90
           +  P H+H KG L+    G      +  +  + P    W+P G+ H      +A   FL+
Sbjct: 79  IAVPAHRHDKGMLLAVREGVSVVRSDGEVLTMTPGRLGWMPPGMLHEAHWFGDARGLFLY 138

Query: 91  IEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ 149
           +   A  ++P   C     PL   L+  LA     ++    T RL +VL  EL   PQ  
Sbjct: 139 VRADACDSLPAQACAWASGPLVEALLQRLAGIPPDEQNLAHTLRLFEVLVAELRILPQAS 198

Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209
           L LP+    ++  +   +   P +   +  WA    MS R L R    ETG++  +WRQQ
Sbjct: 199 LPLPMPRDHRLHELATTLLDRPDDARGIEAWARRVNMSSRTLMRRFRAETGITLGRWRQQ 258

Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
            +L+ +L+ L  G  V + A  +GY+S +AFI+ F+   G TP +Y AR
Sbjct: 259 ARLLRSLEWLAAGKPVTEAALAVGYESISAFISSFRNAYGVTPSQYFAR 307


>UniRef50_Q5E435 Transcriptional regulator, AraC family n=3 Tax=Vibrionaceae
           RepID=Q5E435_VIBF1
          Length = 271

 Score =  115 bits (289), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 114/235 (48%), Gaps = 4/235 (1%)

Query: 22  FCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT 81
           F + A T+ L+   H H  GQL L   G +   V+      P  YA+W P  + H     
Sbjct: 33  FFLEAKTETLS---HSHPWGQLHLIKQGRLEMEVDKQKMFCPANYAIWTPAHLLHRAFNH 89

Query: 82  ANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFD 140
            + E C + IE   +  +PT+ C   ++PL R ++  L  R TT+      + L  VL +
Sbjct: 90  NDVEYCAINIEFELSQKLPTSACMFPLTPLLRAIVDDLVERQTTEVLSTEDKYLSHVLIE 149

Query: 141 ELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETG 200
            L +    + +LP +    +  ++  + + P +  +L  WA     +ER LAR   KE  
Sbjct: 150 RLSKTNPIENYLPFTDDKLLAPILMQLQENPADDSSLEIWAKRVFSTERTLARRFQKELK 209

Query: 201 LSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           +SF  WRQ+ +L  A+  L    ++ ++A+ LGY   ++FI MF+K  G TP ++
Sbjct: 210 MSFNDWRQRAKLAKAMVLLKDAISINEIAYQLGYSQGSSFIKMFRKHTGVTPEQF 264


>UniRef50_C6RQZ7 Transcriptional regulator, AraC family n=1 Tax=Acinetobacter
           radioresistens SK82 RepID=C6RQZ7_ACIRA
          Length = 254

 Score =  115 bits (288), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 113/236 (47%), Gaps = 9/236 (3%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
           TD      H+H + QL+  L G I       +W++PP   +WIP    HS ++  N E  
Sbjct: 20  TDGYVEGTHRHDRIQLLHTLSGVIHVRTSEGIWVIPPSKGIWIPENKRHSIKIFGNVEAR 79

Query: 88  FLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAE--PMTR--RLIQVLFDEL 142
            +F++P A     T C  + I  L  ELI    N+    + E  P TR  RL++++ DEL
Sbjct: 80  GIFVDPFARADFNTQCSVVAIPKLLSELI----NQAVQIKEEILPHTRNERLLELILDEL 135

Query: 143 PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202
               +    LP +    ++ + E +         L   A   A++ + L+RL  KE  ++
Sbjct: 136 RFLEEIPFRLPEAKSEILKEICENIKADLSATNHLEMVAKQHALNSKTLSRLFQKELNMN 195

Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           F  W +Q +L+ AL  L     +  +A  LGY+S +AF  MFK+ +G TP  YI R
Sbjct: 196 FSVWLKQAKLLQALTDLEMRKPILNIALDLGYESPSAFSYMFKRQMGMTPTEYIKR 251


>UniRef50_C9NXQ1 Transcriptional regulator AraC family n=1 Tax=Vibrio
           coralliilyticus ATCC BAA-450 RepID=C9NXQ1_9VIBR
          Length = 243

 Score =  115 bits (287), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 2/222 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           HQH   QL     G  T    +  W + P    WIP  ++H + V A+ E   +++  + 
Sbjct: 20  HQHEYAQLYWLNKGIFTIETSDQQWTITPACLGWIPPHLQHRSDVVADIEAVMIYVPLTW 79

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           +   P     ++ + L + LI  + +   +    P  R+  QVL DE+   P   L+LP+
Sbjct: 80  LNAFPQQAKVIQSNTLIQALIERITHFDLSAMTAPQQRQF-QVLLDEIHLAPASNLYLPL 138

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
               K+R + + +   P +  +  + A  F  S R L+RL  KETG++F  WRQQ +L+ 
Sbjct: 139 PKEAKMRQIADTLLATPDDARSQTELAHDFGTSTRTLSRLFKKETGMAFGFWRQQARLVS 198

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           +L  L KG ++  VA + GY +T++FIT FK   G TP  Y 
Sbjct: 199 SLPMLEKGLSITYVALSCGYSNTSSFITAFKARFGVTPSVYF 240


>UniRef50_D1P6X5 Transcriptional regulator, AraC family n=1 Tax=Providencia
           rustigianii DSM 4541 RepID=D1P6X5_9ENTR
          Length = 276

 Score =  115 bits (287), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 2/229 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS- 94
           H+HR+ Q +    G I  +  +  W++PP   VWIP    H  ++  N     L+IEP+ 
Sbjct: 43  HEHRRAQFLYGATGLIEVSTADGEWVIPPDCGVWIPAQTLHETRML-NVSTRSLYIEPTV 101

Query: 95  AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           A      C  L++S L R+L+L   +             LIQ++  E+ +        P+
Sbjct: 102 APRQSRKCEVLRVSRLLRQLLLEAVDIPLEYDLHGREGILIQLILHEVARAKPLPFFAPI 161

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
                + T+       P       +WA     SER+ +R    +TGLSF  WRQQ  L+ 
Sbjct: 162 PRDTHLATLCREFLTAPHITSLPQEWAKKLHKSERSFSRFFSAQTGLSFSNWRQQACLLN 221

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVS 263
           A+  +  G ++ +VA  LGY +  +F TMFKK LGQ P  +I ++   S
Sbjct: 222 AITNISAGKSITEVAFDLGYCNVGSFSTMFKKWLGQPPSSFIQQIDESS 270


>UniRef50_B7H290 Bacterial regulatory helix-turn-helix protein, AraC family protein
           n=15 Tax=Acinetobacter RepID=B7H290_ACIB3
          Length = 254

 Score =  114 bits (285), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 110/214 (51%), Gaps = 2/214 (0%)

Query: 41  GQLILALHGAITCTVENALWMVPPQYAVWIP-GGVEHSNQVTANAELCFLFIEPSAVT-M 98
           G    +L+G +   VE  +++ PP Y +WIP   V  S  +        + + P   + +
Sbjct: 35  GDFNFSLNGILEIQVEEQIYLSPPSYGLWIPPQTVHQSTHIDHEIHYICIRLHPRLCSIL 94

Query: 99  PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHP 158
              C    I P  R L+L +  +            L+QVLFD+L Q P    +LP + HP
Sbjct: 95  GDICRCFSIQPFFRTLVLQILEQQKQTEKPEYLEHLLQVLFDQLQQAPAYSHYLPQTRHP 154

Query: 159 KIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQG 218
            +  ++E ++   +   +L Q    F++S+R+L RL  +E  LS  +WR + +++ A+  
Sbjct: 155 VLLPILEKLSDPLLFNLSLQQLLQNFSVSDRHLLRLSQQELQLSLSEWRNRAKIVYAIHQ 214

Query: 219 LVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252
           + +G +++++A+ LGY  +++FI  FK+  GQTP
Sbjct: 215 IRQGTSIKRLAYDLGYQHSSSFIEFFKRYTGQTP 248


>UniRef50_B5XX95 Transcriptional regulator, AraC family n=7 Tax=Enterobacteriaceae
           RepID=B5XX95_KLEP3
          Length = 266

 Score =  113 bits (283), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 115/230 (50%), Gaps = 9/230 (3%)

Query: 33  SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92
            P H H +GQL+ A  G +    E+  W++PPQ A+W+P    HS  + +  +L  ++  
Sbjct: 39  DPPHHHVEGQLLFATRGVMLVQTESDRWVIPPQRALWLPPLHIHSYHLLSQTDLRAVYFS 98

Query: 93  PSAVTMPTTCC------TLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146
            S +   T+         +  +PL +ELI   A   +   A P  R++  +L + L + P
Sbjct: 99  SSLIAECTSFTKSQQVHVITATPLVKELI---AGLFSEDYARPSQRKIALLLLEILSEAP 155

Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206
              + LP+ +  ++ +    +        +L + A   AMSER  +RL +K+TG SFR W
Sbjct: 156 PLTMALPMPNDERLFSAARSLLVNQRWEASLSELAFMSAMSERTFSRLFMKDTGFSFRTW 215

Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           +Q+ ++  +L  L  G  +++VA+ LG+    AF   F+  LG TP  ++
Sbjct: 216 KQRARICASLDLLTNGVPIKQVAYQLGFSCPAAFTAAFRCILGATPRDFV 265


>UniRef50_B2UKA3 Transcriptional regulator, AraC family n=8 Tax=Betaproteobacteria
           RepID=B2UKA3_RALPJ
          Length = 265

 Score =  113 bits (282), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 109/221 (49%), Gaps = 1/221 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI-EPS 94
           H H  GQL     G +   VE      P +Y +W+P    HS  +    +   +++ EP 
Sbjct: 34  HTHPWGQLNRIALGLMEVVVETRRLTAPAEYLIWVPANQPHSASIRQATDFLSVYVAEPL 93

Query: 95  AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           A  +P   C ++ +PL R L+     R  +  A+    R  ++L + L +      +LP 
Sbjct: 94  ARRLPPMACLIQQTPLVRALLEDFQARRISVMADDWDLRQFELLVEMLGRAGHTDSYLPD 153

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
           S   ++  +++ +   P +   L  WA     +ER LAR    E G+SF QWR +++L+ 
Sbjct: 154 SKDRQLEPILQAIRLFPADNTPLKTWAERVHSTERTLARRFQHELGMSFVQWRNRVRLLR 213

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           AL  L +  ++Q +A  LGY + +AFI MF+K +G +P RY
Sbjct: 214 ALVWLKEDCSIQDIALALGYGTPSAFIAMFRKQIGFSPQRY 254


>UniRef50_C8QCP4 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b
           RepID=C8QCP4_9ENTR
          Length = 259

 Score =  113 bits (282), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 105/225 (46%), Gaps = 1/225 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL-CFLFIEPS 94
           H H  GQ+I      +   VE    + P    +WIP G  HS+     +    F      
Sbjct: 34  HAHAWGQVIFVKSHVLEMEVEGERLLTPADMPIWIPPGHRHSSYNHRQSLFRTFNLATDL 93

Query: 95  AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
              +P   C L +  +   ++   A R   Q       RL +VL D L   P Q+ +LP 
Sbjct: 94  CDGLPQQACLLNVDTIVHAIMDEFARRGLEQPLSDADWRLCEVLGDRLRLAPVQKSYLPG 153

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
           S+   +  ++  +   P +   L QWA     +ER LAR   ++  +SF +WRQ+L+ + 
Sbjct: 154 SNDKLLAPILHALQVHPGDNTTLAQWAKRVFTTERTLARRCQQQLNMSFSEWRQRLRFLR 213

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
           A+  L +G +VQ +AH LGY S +A I MF+   G TP RY +RL
Sbjct: 214 AITLLEQGISVQAIAHELGYSSASALIVMFQHQAGTTPDRYRSRL 258


>UniRef50_A3QGH9 Transcriptional regulator, AraC family n=1 Tax=Shewanella loihica
           PV-4 RepID=A3QGH9_SHELP
          Length = 262

 Score =  113 bits (282), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 2/222 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H   QLI A  G +  + E + W++ PQ A+W+P  + H  +      L  ++ +P A
Sbjct: 36  HWHHAAQLIYAESGVMELSCEESFWIISPQQALWMPAELPHRLKARGQVSLRSVYFQPDA 95

Query: 96  V--TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153
           +         +L +SPL REL+ +    T++ +       L+Q+L  E+    +  L LP
Sbjct: 96  LPERFSKQPQSLVVSPLLRELMKSAMPVTSSSQPSSREVHLMQLLMSEIGWAQEIPLKLP 155

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
           +    +++ +   +   P     L QW      S R L+RL   + G SF  WRQQ ++ 
Sbjct: 156 MPKDNRLQKICLGLLADPGNDCTLSQWGEIVGASPRTLSRLFQTQLGTSFAIWRQQARIF 215

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            A+  L  G+ + +VA  +GYDS  AF + FKK +G TP  +
Sbjct: 216 AAIPRLNLGEPIVRVAMEMGYDSAGAFASAFKKMMGVTPSEF 257


>UniRef50_Q7NRZ6 Probable transcriptional regulator AraC family n=1
           Tax=Chromobacterium violaceum RepID=Q7NRZ6_CHRVO
          Length = 247

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 110/224 (49%), Gaps = 4/224 (1%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H +GQL  A  GA+    +    ++P     WIP G+ H            L +E + 
Sbjct: 25  HSHAEGQLAWASAGALELDADGRRILLPGGCVGWIPPGMPHGAHYHGELRGWSLQLEAAC 84

Query: 96  V-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           +  +P      + SPL + +   L +    Q      RRL+ VL DEL         L  
Sbjct: 85  LPALPPDLRVWRASPLLQGVFQRLGD-WPEQAGPDAARRLVAVLADELAWAEPYPASLAW 143

Query: 155 SSHPKIRTMVEMMAKGP-VEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
            SHP +R + E +++ P ++W  L +WA    MS R+L R    ETG+   +WR++L+++
Sbjct: 144 PSHPALRKLAEALSRDPSLDWD-LERWARQIGMSRRSLIRHFRAETGMGVAEWRERLRML 202

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
            A   L +G +V   A  LGY  ++AFI  F++  G+TPGRY++
Sbjct: 203 RARALLAEGRSVGYCAAELGYAGSSAFIVAFRRCFGETPGRYLS 246


>UniRef50_B5GYF3 AraC-family transcriptional regulator n=4 Tax=Actinomycetales
           RepID=B5GYF3_STRCL
          Length = 283

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 111/226 (49%), Gaps = 11/226 (4%)

Query: 34  PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93
           P H HR  +L+    G +T  + + ++ V   Y +W+P G+ H  + TA AEL   F  P
Sbjct: 29  PPHAHRLHELVWVRGGTLTSRMGDRVYTVVEGYGLWMPAGMVHEGRATAQAELFHAFFAP 88

Query: 94  SAVTMP-TTCCTLKISPLCRELI--LTLANRTTTQRAEPMTRRLIQVLFDEL-PQQPQQQ 149
             +    T    + ++PL   L+  L+ A+     RA     R   V+FD + P + Q  
Sbjct: 89  DRIPFAFTEPMAITMTPLLESLLTHLSCADIDGEARA-----RAESVVFDVIRPSERQFA 143

Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209
           L LP    P+I  + E +   P +  +L +WA     S+R + R   + TGL F QWRQ 
Sbjct: 144 LRLP--GDPRIDAIAEALLDDPSDGRSLEEWARLLGTSDRTITRAFRQATGLPFAQWRQM 201

Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           L++  AL  L +   V  V+  LGY   ++FI  F++ +G TPG +
Sbjct: 202 LRVHRALMLLAEDIDVTTVSEVLGYAQPSSFIVAFRRVMGITPGAF 247


>UniRef50_Q3JG82 AraC family regulatory protein n=50 Tax=Proteobacteria
           RepID=Q3JG82_BURP1
          Length = 902

 Score =  112 bits (280), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 76/231 (32%), Positives = 119/231 (51%), Gaps = 8/231 (3%)

Query: 30  ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89
           E T+  H H +GQL+ A  G ++  +++  W+VP  +AVWIP    HS +         +
Sbjct: 118 ERTTARHSHARGQLVGASSGLVSIGLDDEDWVVPAIHAVWIPPHRVHSLRSFGPFAGWSV 177

Query: 90  FI-EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTR---RLIQVLFDELPQQ 145
           F+ E     +P     + +S L RE +     R  + R   +     R+  V+ DE+   
Sbjct: 178 FVAEDRCAALPGAPRAIVMSTLLREAV----RRAASWRGAALDAARARIANVILDEIAAA 233

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
                 LP    P++R + + +A    +     +WA +  M+ R L+R  V ETG +F Q
Sbjct: 234 QTGPRGLPRPRDPRLRRIADALAGDLADNRRADEWAAWAGMAPRTLSRRFVSETGFTFTQ 293

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           WRQQ +++ AL+ L  G TV  VA  LGYD+ +AFI MF++ LG TPG+Y+
Sbjct: 294 WRQQARVLRALERLADGVTVTAVALDLGYDNVSAFIDMFRRTLGTTPGQYV 344


>UniRef50_Q7VTI7 AraC-family regulatory protein n=3 Tax=Bordetella
           RepID=Q7VTI7_BORPE
          Length = 275

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 107/230 (46%), Gaps = 13/230 (5%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H + Q +    G +       LW+VPP  A+WIP    H  ++++  ++  L+I+ + 
Sbjct: 35  HWHDRAQFLCGSSGVMRVATRRRLWVVPPMRALWIPARTVHEIRMSSAVDMRSLYIDAAL 94

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRR------------LIQVLFDEL 142
           V  MP  C  L ++ L REL++  +    + R  P                L  ++  EL
Sbjct: 95  VRGMPDDCAVLDMTALMRELVVRASTDAPSTRDAPQRHEASDGALDEEYGLLSALMVAEL 154

Query: 143 PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202
            + P+  L LP+     +R + E        + +    A    +S R L R  + ETGLS
Sbjct: 155 RRLPRCGLDLPLPESAALRGLCERALADLSAFDSAQAQARRLKLSARTLYRRFLDETGLS 214

Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252
           F +W QQ +L+ A++ L  G  V  VA  LGY S +AF  MF + LG +P
Sbjct: 215 FARWIQQARLLDAVRRLGDGQAVTDVALDLGYQSPSAFTAMFNRALGCSP 264


>UniRef50_Q2BQ21 Transcriptional regulator, AraC family protein n=1
           Tax=Neptuniibacter caesariensis RepID=Q2BQ21_9GAMM
          Length = 235

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 111/224 (49%), Gaps = 1/224 (0%)

Query: 34  PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93
           P HQH   QL+ A  G +   V      +PP+ AVWIP G EH       + L  L+IE 
Sbjct: 8   PKHQHEWHQLLYATSGVLIVEVLGERLFIPPEKAVWIPQGHEHQVYSEYGSSLKSLYIEH 67

Query: 94  SA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152
           S   +   T   LKI+PL ++LIL  +  +     +     LI ++   L +       L
Sbjct: 68  SDQFSDWQTSKVLKITPLLKQLILEASTFSVHYSRQGYEAELIALMLASLHRLETDHDQL 127

Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212
           P  +   +  + +M  + P       + A   ++S+R L R  +KETG+S +QW  QL+ 
Sbjct: 128 PWPASRDLYRLCQMFYEQPSLRKTTAKLAIELSVSKRTLERKFMKETGMSVQQWLLQLRF 187

Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           + +L+ L  G ++  +A  LGY S+ AFI MF+   G +PG++I
Sbjct: 188 LKSLELLSAGYSITHIALELGYGSSAAFIHMFRDKTGVSPGQFI 231


>UniRef50_Q84HW2 Transcription regulator n=1 Tax=Rhizobium sp. TAL1145
           RepID=Q84HW2_9RHIZ
          Length = 200

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 107/197 (54%), Gaps = 2/197 (1%)

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTT--CCTLKISPLCRELILTLA 119
           VPP  A+WI    +H   V   AE+  L+++P+    PT+  C  ++++PL RELI + A
Sbjct: 3   VPPTRALWIRANTDHKLSVARAAEIRVLYVDPAIGCAPTSSSCVVVEVTPLVRELISSCA 62

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
                 +      RL +VL D++    +  + LP+ + P+   +V+M+ + P     L  
Sbjct: 63  GLPWDYQPGSKEARLCEVLLDQIATLDRSPVDLPIPTDPRGLRIVDMLKREPSSREPLAA 122

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
            A     S R + R+ V+ET L+F  WRQ+L+L+ AL+ L  G+ V  VA  +GY+S ++
Sbjct: 123 LAARVGASSRTIERIFVRETHLAFGAWRQRLRLLAALELLAYGEAVTNVALDVGYESASS 182

Query: 240 FITMFKKGLGQTPGRYI 256
           F+  F++  G TP R+ 
Sbjct: 183 FVAAFRETFGTTPARFF 199


>UniRef50_C8QEY4 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b
           RepID=C8QEY4_9ENTR
          Length = 260

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 114/221 (51%), Gaps = 1/221 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS- 94
           H H  GQL    HG +   ++   ++ P QYAVWIP   +H +  + +     ++I    
Sbjct: 32  HAHPWGQLNYVSHGVMHLEIDGIRFLSPSQYAVWIPPFADHFSFASRDLVYRTVYISLKL 91

Query: 95  AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           +  +P+   TL +SP+   ++   A R           R+ QV  D++      + +LP 
Sbjct: 92  SNRLPSKPTTLNVSPVLHAILDDFALRDVRVPETEEDLRMAQVALDQILHIKPHETYLPY 151

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
           +   ++ ++++ +   P +  ++  +A    M+ R L R   +E G+SF +WR +L+ + 
Sbjct: 152 AVSDELNSVIKELQLNPGDRRSVEDFAEQLHMTSRTLERRCQRELGISFGEWRSRLKFMH 211

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           A++ L  G TVQ++A  LGY + +AFI MFK+  G+TP +Y
Sbjct: 212 AIESLEAGLTVQRIALELGYTTPSAFIVMFKRFTGKTPEQY 252


>UniRef50_UPI0001B55F3C AraC family transcriptional regulator n=3 Tax=Streptomyces
           RepID=UPI0001B55F3C
          Length = 271

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 109/225 (48%), Gaps = 8/225 (3%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP-- 93
           H+H   QL  A  G +T  +    W++PP  A+WIP G  H+   T  A +  +++ P  
Sbjct: 43  HEHSAHQLAWAAAGTLTVDIGAHSWVLPPTLALWIPAGTPHTTSATRPALMRSVYLLPRH 102

Query: 94  SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ-QQLHL 152
           S V  P     + + PL RELI  LA+       EP  R   + L  +L +  +   + +
Sbjct: 103 SPVRRPGPTV-VTVGPLLRELITHLADTPL----EPGPRARAEALLPDLLRPVEVTTIEV 157

Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212
           P+    +   + E +   P +  +L +W      S R LARL   ETGLSF +WR + +L
Sbjct: 158 PMPRDERALRVAEALVAHPADPRSLDEWGRLVGASARTLARLFSAETGLSFGRWRTRARL 217

Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
              L+ +     +  VAH +GY S ++F+  F+   G+TPG Y +
Sbjct: 218 RAGLEHMAVNRPLTAVAHRVGYTSPSSFVAAFRHETGRTPGAYFS 262


>UniRef50_B4EJY3 AraC family regulatory protein n=10 Tax=Burkholderia
           RepID=B4EJY3_BURCJ
          Length = 279

 Score =  111 bits (278), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 2/225 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H   QL+ A  G +  T  +   ++PP YA+WIP  V H+           L+++ + 
Sbjct: 46  HSHPWAQLMYATSGVLEVTTPSGRQLLPPHYAMWIPPHVPHAVSTRDCVAFHSLYLDEAI 105

Query: 96  V--TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153
               +   C  L ++PL REL++                 L+ ++ D + +     L +P
Sbjct: 106 ARRDVNDDCTILCMTPLLRELMIATGELPVNYDEAGPDGALVCLIADRIARMQPAPLTVP 165

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
           +   P++  +   +   P +  +L +W      + R L+RL  ++TGLSF +WRQ ++L+
Sbjct: 166 LPRDPRLLKIARALHAAPGDTRSLDEWGRQVGATRRTLSRLFRQDTGLSFTEWRQAVRLL 225

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
            +L  L  G  +  VA  LGYDST++FI +F      TPG Y  R
Sbjct: 226 ASLPLLDAGAPIGTVAAQLGYDSTSSFIALFHAKFRVTPGAYAKR 270


>UniRef50_A6V4X5 Probable transcriptional regulator n=7 Tax=Pseudomonas aeruginosa
           RepID=A6V4X5_PSEA7
          Length = 254

 Score =  111 bits (277), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 112/234 (47%), Gaps = 14/234 (5%)

Query: 32  TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91
           T+P H H  GQL     G +    E     +PP+   WIP G  H+   +  A L +   
Sbjct: 22  TAP-HSHACGQLYCLERGLLVVEDERGRQALPPRQIAWIPPGHRHAAH-SHGALLGW--- 76

Query: 92  EPSAVTMPTTCCTLKISP---LCRELILTLANRTTTQRA----EPMTRRLIQVLFDELPQ 144
             SA    + C  L  SP    C + +  +  R T   A          L++VL DEL  
Sbjct: 77  --SAYLDTSHCHALPASPGVLACSDFVALIVERATRWPAGSAWSAERENLLRVLLDELRH 134

Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204
              Q+  LP    P++R + E +   P +     +WA +  +S R+L+RL   ETG+SF 
Sbjct: 135 AVPQRTRLPYPGDPRLRRIAEALLANPGDPRPAAEWARWAGLSSRSLSRLFGTETGMSFA 194

Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           QWRQ  +L  A++ L  G  V +VA +LGY+S ++F + F+   G+TP  Y +R
Sbjct: 195 QWRQLARLHAAVERLAAGQAVGEVAWSLGYESPSSFASAFRAVFGETPSGYSSR 248


>UniRef50_B6ELX6 HTH-type transcriptional regulator, AraC family n=1 Tax=Aliivibrio
           salmonicida LFI1238 RepID=B6ELX6_ALISL
          Length = 275

 Score =  110 bits (275), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 114/235 (48%), Gaps = 4/235 (1%)

Query: 22  FCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT 81
           F I A T+ L    H +  GQL L   G +   V+    + P  Y +W P   +H     
Sbjct: 30  FFIEAKTETLP---HSYSWGQLHLIKQGVLEMEVDQQKMVCPANYTIWTPPHQKHRAFNR 86

Query: 82  ANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFD 140
           ++ E C + I    +   P   C + ++PL R +I  L  R TT  +    + L  VL D
Sbjct: 87  SDIEYCAINITAELSEKFPKHACMIPLTPLLRAIIDDLIERKTTMVSSEEDKCLSYVLMD 146

Query: 141 ELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETG 200
            L +    +++LP +    +  ++  + + P +  +L  WA     +ER LAR   KE  
Sbjct: 147 RLVKINPIEIYLPSTQDKLLAPILTQLEETPEDDSSLSVWAKRVFSTERTLARRFQKELK 206

Query: 201 LSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           +SF  WRQ+ +L+ A+  L +  ++ ++A+ LGY   ++FI MF+K  G TP ++
Sbjct: 207 MSFNDWRQRAKLVKAMTLLKESISINEIAYQLGYSQGSSFIKMFRKHTGVTPEQF 261


>UniRef50_A5U9G2 AraC-family transcriptional regulator n=12 Tax=Mycobacterium
           tuberculosis complex RepID=A5U9G2_MYCTA
          Length = 263

 Score =  110 bits (275), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 8/223 (3%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H+H   Q++    GA++ T     W+ P   A+WIP G  H ++   + +   + ++P  
Sbjct: 25  HRHPSHQIVYPSAGAVSVTTHAGTWITPVNRAIWIPAGCWHQHKFHGHTQFHGVALDPQR 84

Query: 96  VTM-PTTCCTLKISPLCRELIL--TLANRTTTQRAEPMTRRLIQVLFDELPQQP-QQQLH 151
               P T   L ++PL REL++  + A+RT T        R++ VL D+LP    ++ L 
Sbjct: 85  YRGGPATPTVLAVNPLMRELVIACSQADRTDTDEHH----RMLAVLQDQLPTTSIREPLW 140

Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211
           +P  +  ++R    ++A    +   L Q  G   +S+R L+RL   E G++F QWR QL+
Sbjct: 141 VPSPTDRRLRHACALIADNLTQPLTLQQIGGRIGVSQRTLSRLFSDELGMTFPQWRTQLR 200

Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
           L  AL  L +   V  VA   G+ + +AFI  +++  G TPG+
Sbjct: 201 LQHALVLLAERHDVTSVASECGWATPSAFIDTYRQAFGHTPGQ 243


>UniRef50_Q2L001 AraC-family transcriptional regulator n=4 Tax=Bordetella
           RepID=Q2L001_BORA1
          Length = 258

 Score =  110 bits (275), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 117/223 (52%), Gaps = 1/223 (0%)

Query: 34  PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93
           P H HR+ QL+ A+ G +        W+VPP   VW+  G+EH  +++   ++  +F+EP
Sbjct: 34  PRHCHRRAQLLYAVEGVMIVEARAGRWVVPPTRGVWLDAGLEHRVRMSGRVKMRTVFVEP 93

Query: 94  SAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152
            AV  +P   C +++ PL RELIL  A    +         L+++L  EL   P+  L+L
Sbjct: 94  DAVAHLPQGGCVVEVPPLLRELILAAALLPLSYEDTGRDGLLMRLLLAELAAIPRLPLYL 153

Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212
           P     ++R + + +++   +      WA    +S R L R  ++ETG++F +WRQ  +L
Sbjct: 154 PWPQDKRLRALCDALSRDLAQVHEAAYWAEQMQVSTRTLHRAFLRETGMTFGRWRQHARL 213

Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           + AL+ L  G+ +  +A   GY S +AF  MFK+  G  P  +
Sbjct: 214 LSALERLAHGEKILSIALDHGYTSQSAFSAMFKQHFGVPPSAF 256


>UniRef50_Q47UH5 Substrate-binding transcriptional regulator, AraC family n=1
           Tax=Colwellia psychrerythraea 34H RepID=Q47UH5_COLP3
          Length = 272

 Score =  110 bits (274), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 111/222 (50%), Gaps = 2/222 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           HQH   Q+     G +   V ++ +++P    ++IP    H + V  + +   +++ P  
Sbjct: 37  HQHPWHQIAFPFEGILQTKVADSQFVIPHSGMLFIPANTPHESFVVTDTKFIGIYLNPQF 96

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQ-RAEPMTRRLIQVLFDELPQQPQQQLHLP 153
               P T   + ++P  REL+L + +  +    +E    +L+ VL D++      Q+ L 
Sbjct: 97  QNHFPLTAKAISVTPFLRELVLHINHGVSNSIVSEEELSKLVAVLIDQISSGESYQMKLL 156

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
           + S  ++  + + +   P     L  WA     SER L+RL  KE G++F  WRQ L+L+
Sbjct: 157 LPSDRRLMIIFKALMTDPQLNTKLSDWAKQVGASERTLSRLFTKELGMTFPLWRQHLRLV 216

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            +L  L    +VQ++A  +GY++ ++FI  FKK   QTP +Y
Sbjct: 217 SSLNLLETNLSVQEIAFKVGYNADSSFIYAFKKLFQQTPQQY 258


>UniRef50_Q01YV9 Transcriptional regulator, AraC family n=1 Tax=Candidatus
           Solibacter usitatus Ellin6076 RepID=Q01YV9_SOLUE
          Length = 257

 Score =  110 bits (274), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 107/223 (47%), Gaps = 5/223 (2%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI---- 91
           H+H   QL+ A+ G++T       W++PP  AV+IP    HS ++     +  L+     
Sbjct: 35  HEHPWRQLLYAISGSMTVYAGRWSWIIPPGKAVFIPADCRHSMRMWGQVAMRSLYFPAAW 94

Query: 92  EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151
           E SA   P  C  L ++PL RELIL +          P   RL  +L DE+   P   L 
Sbjct: 95  EVSAFASPE-CFVLSVTPLLRELILRVIEWAALDSRVPEHARLAALLVDEIACAPVTPLL 153

Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211
           LP+    +   + + +   P    +L   A   A   R L RL   ETG+SF  WRQQ +
Sbjct: 154 LPLPIDARAAAVAQSVLASPARNDSLDDLARRHATGRRTLERLFRDETGMSFGMWRQQAR 213

Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
           L+ ++  L +G  V + A   GY S +A+I  FK+  G TPG+
Sbjct: 214 LLHSVGALAEGKPVTEAALDAGYASLSAYIAAFKRTFGCTPGK 256


>UniRef50_C6DFV4 Transcriptional regulator, AraC family n=1 Tax=Pectobacterium
           carotovorum subsp. carotovorum PC1 RepID=C6DFV4_PECCP
          Length = 273

 Score =  110 bits (274), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 120/231 (51%), Gaps = 13/231 (5%)

Query: 33  SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92
           +P H+H++GQL+ A+ G +    ++  W++PPQ ++W+P    HS  + ++ EL  L+  
Sbjct: 39  NPSHKHKRGQLLYAVKGVMLVQTDSRQWVIPPQRSLWLPAEQWHSFTLLSHTELRTLYFT 98

Query: 93  PSAVTMPTTCCTLK------ISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146
           PS V       TL       ++P  + LI +L  ++     + +  +L+  + +E    P
Sbjct: 99  PSFVAETCGMKTLDHIHVIGMTPFAQHLISSLFEQSFNHSTQKLIAQLLLRIVNETEALP 158

Query: 147 QQQLHLPVSSHPKI-RTMVEMMAKGPVEWG-ALGQWAGFFAMSERNLARLIVKETGLSFR 204
              + L +    K+ R   +++      W  +L ++A   AMSER  +R   ++TG SFR
Sbjct: 159 ---VDLAMPCDDKLHRVAQDILVNN--RWNVSLSEFAELVAMSERTFSRYFTEDTGCSFR 213

Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            W+Q+ ++ +++  L  G  V+ VA+ LG+   ++FI  F+   GQTP  +
Sbjct: 214 TWKQRARIFVSMDLLSNGMPVKNVAYKLGFSCPSSFIAAFRTVTGQTPSCF 264


>UniRef50_B1LVX0 Transcriptional regulator, AraC family n=3 Tax=Rhizobiales
           RepID=B1LVX0_METRJ
          Length = 272

 Score =  110 bits (274), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 1/215 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H + QL+ A  G +    ++  W+VP  +A+WIP  + H+        +C  +++P+A
Sbjct: 47  HFHPRAQLLYATSGLMMAFADDGTWVVPEGHALWIPPRLPHAVATHGAVSMCSAYLDPAA 106

Query: 96  V-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           V + P +C  + +S L    +  LA        +     L  ++ DE+ + P   L LP+
Sbjct: 107 VRSFPASCRVIAVSRLMASALTALAEEPVLYAVDGRGGHLAALVLDEIGRAPATPLALPL 166

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
              P++R +   + + P     L  WA     S R L R    ETGLSF  WR + ++I 
Sbjct: 167 PRDPRLRRVCLALIEDPASEADLDAWADRAGASRRTLTRGFRAETGLSFGDWRARARVIR 226

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
           AL    +G   + VA  +GY S  A  T   + LG
Sbjct: 227 ALALAAEGRPPRAVAAAVGYRSAQALRTTVARVLG 261


>UniRef50_A0KHN7 Transcriptional regulator, AraC family n=1 Tax=Aeromonas hydrophila
           subsp. hydrophila ATCC 7966 RepID=A0KHN7_AERHH
          Length = 268

 Score =  109 bits (273), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 123/241 (51%), Gaps = 2/241 (0%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
            D  ++P H H  GQL L   G +   +++   + P  Y +W+P  +EH++      +  
Sbjct: 28  ADSASAP-HSHPWGQLSLISLGVMEIVLDDHRLVAPADYLIWVPADLEHASYNQQALDYT 86

Query: 88  FLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146
            +++  + A  +P     L+++PL R ++    +R      +    R  ++L ++L +  
Sbjct: 87  SIYVNHALAARLPAEPRLLQMTPLIRAILADFCDRKLGHMEDEWDVRQAELLVEKLTRTR 146

Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206
            Q  +LP+S    +  M+  +   P +   L QWA     +ER LAR  V+E G++F QW
Sbjct: 147 CQDSYLPMSQDKLLAPMLAALHSDPADPRTLAQWAEQLHTTERTLARRCVRELGMNFGQW 206

Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQS 266
           R +L+L+ AL  L     VQ++   LGY ST+AFI MF + LG +P RY  +L   + Q+
Sbjct: 207 RARLKLLKALAWLKGELPVQEIGWRLGYGSTSAFIAMFNRELGCSPQRYRQQLGIGAGQA 266

Query: 267 A 267
           A
Sbjct: 267 A 267


>UniRef50_A9BNM6 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria
           RepID=A9BNM6_DELAS
          Length = 310

 Score =  109 bits (273), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 128/279 (45%), Gaps = 41/279 (14%)

Query: 18  AAVAFCIHAGTDELTS----PV---------------HQHRKGQLILALHGAITCTVENA 58
           AA   C HAG  EL +    PV               H H   QL+ A+ G +     + 
Sbjct: 31  AAAVPCSHAGLPELQAAAPLPVTGVAADYPAGLEVEEHSHECCQLLYAVQGVLEVRAGSG 90

Query: 59  LWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILT 117
            W+VPP   VW+  GV H  ++    ++  LF++  +A  +P T C +++SPL RELI  
Sbjct: 91  RWVVPPTRGVWLRSGVPHGLRMRGAVQVRSLFVDAQAAADLPGTDCVIEVSPLLRELISE 150

Query: 118 LANRTTTQRAEPMTRR---LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEW 174
           +A    +    P  RR   ++++L  EL Q P    HLP     ++  +   +A+G    
Sbjct: 151 VARWPASA---PPGRRESMVVELLLQELRQPPVVPFHLPWPQDARMAAVCHALAEGEGAD 207

Query: 175 GALGQWAGF---------------FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGL 219
           G     A                  AM E+   R  ++ TG+SF +WRQ+ +L+ ++Q L
Sbjct: 208 GFATAAAAADIGAATATAADWAARLAMGEKTFHRHFLQATGMSFGRWRQRARLLSSMQAL 267

Query: 220 VKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           + G  + +VA   GY+S +A+   F++  G  P  + AR
Sbjct: 268 LAGRPIVQVALEAGYESHSAYSLAFRRQFGMPPSAFGAR 306


>UniRef50_D0L975 Helix-turn-helix-domain containing protein AraC type n=3
           Tax=Corynebacterineae RepID=D0L975_GORB4
          Length = 259

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 3/219 (1%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H   Q++ A  G +  T +   W+ PP  A+WIP    H ++   N E   + IEPSA
Sbjct: 35  HHHLTHQIVYASSGLVEVTTQAGTWVAPPDRAIWIPALAWHEHRFYGNTEFNCVSIEPSA 94

Query: 96  VTMPTTC-CTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
                     + ++ L RELI+  +   T+    P  +RL  VL D+L +  +  L L  
Sbjct: 95  RPFADDAPVVVAVTGLVRELIVEGSR--TSDPTCPAQQRLRSVLLDQLRRTDETALSLRT 152

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
            S  ++     ++        +L         S+R L+RL+  E GL++ QWR  ++L  
Sbjct: 153 PSDDRLVHACAIVTADLTRNHSLADLGRTVGASKRTLSRLLRDELGLTYPQWRTSVRLHR 212

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253
           AL  L +G  V +VAH  G+ + +AFI  +++ LG TPG
Sbjct: 213 ALILLAEGAGVTEVAHRCGWATPSAFIDAYRRVLGHTPG 251


>UniRef50_D1BCS3 DNA-binding domain-containing protein, AraC-type n=1
           Tax=Sanguibacter keddieii DSM 10542 RepID=D1BCS3_SANKS
          Length = 310

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 113/223 (50%), Gaps = 3/223 (1%)

Query: 38  HRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT 97
           HR+ +LI A  G++T   ++ LW VPP   +WIP    H  +          ++ P  V+
Sbjct: 85  HREHELIWATAGSLTVETDDQLWTVPPGLGIWIPALTRHHVRAAPGTLTHVTYLAPERVS 144

Query: 98  MPTTCCTLKISPLCREL-ILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSS 156
            P+    +    L R +  L L N+++T   + +  RL QV+ D L       L + + +
Sbjct: 145 -PSWGAGIAGVTLSRAVHELVLHNKSSTLDDD-VRLRLQQVVVDLLVPVESASLDITMPT 202

Query: 157 HPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMAL 216
             ++R++ + +   P +   L +WA    +S R L+R  V+ETG++  +WR  +++  AL
Sbjct: 203 DLRLRSVADAIVADPADDRTLTEWADTLNISSRTLSRGFVRETGVTLTRWRILVRMRQAL 262

Query: 217 QGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
             +  G +V  VAH LGY + + F  +F++ LG TP  Y+  L
Sbjct: 263 LEISSGRSVAAVAHRLGYANPSTFTDLFRQTLGHTPAAYLRSL 305


>UniRef50_B4SPX2 AraC protein arabinose-binding/dimerisation n=2
           Tax=Stenotrophomonas maltophilia RepID=B4SPX2_STRM5
          Length = 266

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 9/256 (3%)

Query: 6   NLNGYEPDRHHEA----AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           ++   +PD H +A    A    I A   +  S  HQH + QL+    G    T  + + +
Sbjct: 4   DMAWLQPDAHFDADAWSAPVLGIAASLADHDSGWHQHARAQLLYTRQGCTRLTYGDRISL 63

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLAN 120
           +PP  A WIPGG+ H  Q+    +   L+ + + +  +P     + + PL + L+  +A 
Sbjct: 64  LPPARAAWIPGGLRHRAQMRQAVDYRSLYFDATLSAQLPRQPAIIGVGPLLQALLEPIAQ 123

Query: 121 RTTTQRAE-PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
               Q  + P     + +   E+   P   + LP+   P+I   + +  + P E   LG+
Sbjct: 124 APFDQDWQAPRAHHQLALCVLEIAAAPVAPMDLPLPRDPRIARCLPLAEQLPPE---LGE 180

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
            A    +S R + RL+ ++TG+S++ WRQQ +L+ A++ L+ G  V  VA   G+ + + 
Sbjct: 181 LAARTGLSARTVGRLMQRDTGMSYQAWRQQWRLMRAMELLLLGHRVAHVAQDTGFSAESP 240

Query: 240 FITMFKKGLGQTPGRY 255
           FI  F+   G TP  +
Sbjct: 241 FIAFFRSMTGTTPAAF 256


>UniRef50_C1MBM6 Transcriptional regulator n=2 Tax=Citrobacter RepID=C1MBM6_9ENTR
          Length = 261

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 2/224 (0%)

Query: 34  PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93
           P H H   Q   A  G++   V    W++P  Y +WIP   EH+     +  L  L I+P
Sbjct: 38  PQHSHSFMQFHFARKGSMRIDVAGKCWIIPAHYGIWIPNNTEHAVWALDDVYLENLDIKP 97

Query: 94  SAVTMPTT-CCTLKISPLCRELILTLANRTTTQ-RAEPMTRRLIQVLFDELPQQPQQQLH 151
             +      C  + IS   RE I    N  +    ++    +L+ VL D + Q P+    
Sbjct: 98  GFLEESINECKVVAISDFAREFIHYATNSISGHYDSQSKEGKLVSVLVDIILQLPEVAFV 157

Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211
           LP     ++  +   + + P    ++  WA    MS R  +R   KETGL F  W+Q+++
Sbjct: 158 LPWPQDRELTKVCRTIQESPALEHSVEYWAQHLGMSARTFSRHFKKETGLPFSVWKQKMR 217

Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           ++ ++  L K  +V  VA  +GY ST AF   F++  G  P  Y
Sbjct: 218 ILESVLMLKKNKSVTAVALDVGYSSTAAFSYAFRQAFGVPPSNY 261


>UniRef50_B4SMW0 Transcriptional regulator, AraC family n=3 Tax=Stenotrophomonas
           RepID=B4SMW0_STRM5
          Length = 265

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 116/221 (52%), Gaps = 2/221 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           HQH +GQL+ A  G +    ++  W++P  +  WIP  + H+       +   L+    A
Sbjct: 39  HQHARGQLLGAQQGLLRIAADDLHWLLPAGHVAWIPPLLPHALLSADGFDGWSLYFNAEA 98

Query: 96  -VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
            + +P+T    + + L +   +  A R   +  +    RL  V+ DE+       L LP 
Sbjct: 99  CLGLPSTPRIFQPNALLQAATIR-ALRWPHRPLDAAQARLAGVIADEIAASTPLPLALPQ 157

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
               +++ +   +A+ P +  ++  WA    +S R+LAR  + ET ++  QWRQ+L++++
Sbjct: 158 PRDRRLQKIAAALARAPHDNRSIEDWATRSGLSSRSLARHWLAETHMTLSQWRQRLRVLL 217

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           AL  L+ G+ V  VA ++GYD+ +AFI +FK+ +G TP RY
Sbjct: 218 ALPRLLSGEPVISVALSMGYDTPSAFIAVFKREMGVTPARY 258


>UniRef50_B4SKF1 Transcriptional regulator, AraC family n=2 Tax=Stenotrophomonas
           maltophilia RepID=B4SKF1_STRM5
          Length = 267

 Score =  107 bits (268), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 3/222 (1%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMV-PPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
           H H  GQ      G +   ++   WMV PP YA+WIP G+ H ++  +       ++ P+
Sbjct: 40  HSHPWGQFNFVAQGVMEMKIDGE-WMVSPPHYAIWIPPGMAHYSRNRSALAYRSAYLSPA 98

Query: 95  -AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153
            +  +P  C  L++SPL REL+  LA +  T    P  +R+  V+ D++         LP
Sbjct: 99  LSRRLPVRCHALEVSPLLRELLHELAQQGVTDPKTPAQKRMAAVVIDQIVNAAVLPSFLP 158

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
           V+S   ++ ++  + K      ++   A    MS R L RL   E G+S   WR +++ +
Sbjct: 159 VASSDVLKQVMVHVEKHLSAAESVADIARRHHMSVRKLERLARSELGMSLGDWRGRVKFV 218

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            A + L     + ++A  LGY   +AF  MFK+    TP +Y
Sbjct: 219 RATEALCTRRPISRIAEELGYSGVSAFAEMFKRHAQCTPDQY 260


>UniRef50_C3JWU5 Transcriptional regulator, AraC family n=4 Tax=Rhodococcus
           erythropolis RepID=C3JWU5_RHOER
          Length = 274

 Score =  107 bits (266), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 115/233 (49%), Gaps = 6/233 (2%)

Query: 36  HQHRKGQLILALHGAITCTVENAL-WMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
           H+H + +LI    G +   V + + W VPP   +W+P G  H+ +     E    +  P 
Sbjct: 39  HRHPEHELIWGNSGGMLTVVADGITWEVPPSAGLWLPAGALHAVKAGPGTEFFCTYFRPE 98

Query: 95  AVTMPTTCCTL-KISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153
           A   P+    L  +S L RE++L +  R     A     R   V FD L       + +P
Sbjct: 99  AHAAPSGVPGLFGVSALLREVLLHMHRRNMPDEARSRAER---VAFDMLQPLEVAAVEVP 155

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
           + + P+   + E +   P +  +L +WA     S R L R+  + TG++F QWR Q+++ 
Sbjct: 156 MPTDPRALFVAEALVANPADQRSLSEWALTAGGSVRTLTRVFAQGTGMTFAQWRIQVRVR 215

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQS 266
            AL  L  G  V  V+  +GY++ +AF+ +F++  G+TPG  + +  +V+P+S
Sbjct: 216 AALTYLAAGVPVSVVSRRVGYETPSAFVAVFRRVTGRTPGSMMNK-GSVAPES 267


>UniRef50_B2I1A9 AraC-type DNA-binding domain-containing protein n=8
           Tax=Gammaproteobacteria RepID=B2I1A9_ACIBC
          Length = 262

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 103/227 (45%), Gaps = 2/227 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS- 94
           H HR+ Q + A  G +    E+  W+V P   VWIP G  H   ++  +    L+IE S 
Sbjct: 32  HSHRRAQFLYAPEGLMKVETEDGQWLVLPYSGVWIPAGKPHRVWLSKVSTYS-LYIEVSN 90

Query: 95  AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           A      C  +++SPL  +L++         +       LI +L  EL   P   L +P+
Sbjct: 91  APRQANYCEVIQVSPLLHQLLIQANQLPIDYQRAGRDGSLIDLLLYELEAAPALPLFIPL 150

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
             +  +        + P    +   WA     SER   R    ETG+SF+ WR ++ +I 
Sbjct: 151 PHNTLLSKQCADFMQHPDIHSSPKDWAHDHNKSERTFHRWFKTETGMSFQAWRNRVCIIY 210

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTT 261
           AL  L +  ++ ++A +LGY+ + AF  MF K +G  P  +  R  T
Sbjct: 211 ALNALKENISITEIAFSLGYEHSAAFTAMFSKIMGYPPTHFQKRFHT 257


>UniRef50_C7JHN7 Transcriptional regulator AraC n=8 Tax=Acetobacter pasteurianus
           RepID=C7JHN7_ACEP3
          Length = 265

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 1/227 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI-EPS 94
           H H  GQ+ +   G +    ++A W++ P+  +W+P  + H  +         L+I E  
Sbjct: 38  HVHNNGQIFVVESGVMAVKTQDAYWLIGPEQLLWLPPRLAHEARSHGAITGWSLYIAEDR 97

Query: 95  AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
              + +       + L    +  L+  T     +  T  L +  +DE    P Q L LP 
Sbjct: 98  CAFLVSKPFVADSTRLLSAQVERLSQNTQDTTWDARTACLAESFWDEFLSIPHQSLSLPF 157

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
               +++ + + +   P +      WA    MS R+  R    +TG+ F  WRQ+L+++ 
Sbjct: 158 PGDVRLKRVADALCANPADSRGQQDWADMAGMSLRSFVRYFTADTGMQFSAWRQRLRILN 217

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTT 261
           A + L +G+ V  VA  +GY+S  AF   FKK  G +P  Y  R  T
Sbjct: 218 AQEKLARGENVTHVAAAVGYESLGAFAAAFKKNTGYSPSTYAQRCMT 264


>UniRef50_Q28KW4 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1
           RepID=Q28KW4_JANSC
          Length = 253

 Score =  105 bits (261), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 2/216 (0%)

Query: 33  SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92
           S  H H + Q+I ++ G +    E   W VP  + + +P G+ H+ ++  +  +  L++ 
Sbjct: 30  SDWHSHPRHQIIYSVSGLMMTDTEGVRWAVPSGFGLIVPAGIAHTTKMIGDVSIETLYVS 89

Query: 93  PSAV--TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150
           PS+   +   +C  + IS +   LI  L       R       L Q++F EL   P   L
Sbjct: 90  PSSRGRSAFESCRVVSISAMLASLISELCREELRDRNSRKAFHLRQLIFLELSDAPTSHL 149

Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210
            +     P++R + + +   P     + QWA     S R+  R    +T  +FRQW Q+L
Sbjct: 150 AVKYPVDPQLRRVCDALIADPANSWTIDQWAFEIGKSRRSFTRAFYSQTDQTFRQWTQRL 209

Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKK 246
           +  +ALQ   +G +++++A  LGY S  +   M +K
Sbjct: 210 RCQLALQKRAEGQSLERIARDLGYGSRYSLEAMMQK 245


>UniRef50_D1BHF8 DNA-binding domain-containing protein, AraC-type n=1
           Tax=Sanguibacter keddieii DSM 10542 RepID=D1BHF8_SANKS
          Length = 309

 Score =  105 bits (261), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 6/232 (2%)

Query: 30  ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89
           E+T P H+H + +L+    G+ +   +   W +PP  AVW+P GV ++    A + +   
Sbjct: 43  EVTWPAHEHAESELLWCASGSASLEADGRRWTIPPSLAVWVPAGVRNAAGAAAGSLVRAT 102

Query: 90  FIEPSA---VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146
           F + +A   V +P     + ++   R L++    R     A    RRL +V+ D L   P
Sbjct: 103 FFDVAATRLVDVPDVVTGVAMTDAVRVLLMHNHLRDLDDAAR---RRLHRVVLDLLVPVP 159

Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206
            +   L +     +R + E +   P +     +WA    +  R LAR    ETG++F +W
Sbjct: 160 HESFDLLLPRTGHLRWVAESILADPGDRRTTEEWASRCGLHPRTLARQFHAETGVTFTRW 219

Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           R   ++  A++ L  G  V  V+  +GY S +AF+  F++  GQTP  Y+ R
Sbjct: 220 RILARMQWAIRELALGAPVLAVSRQVGYRSPSAFLAHFRELTGQTPTAYVGR 271


>UniRef50_A6SYJ9 Transcriptional regulator, AraC family n=2 Tax=Oxalobacteraceae
           RepID=A6SYJ9_JANMA
          Length = 249

 Score =  104 bits (260), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 115/238 (48%), Gaps = 12/238 (5%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
           +H HR+ QL+ A  G +  T     W+VPP  AVW+P G+EH+  + A+ E+  L I+P 
Sbjct: 16  LHVHREAQLLFASSGVMQVTTPKGHWLVPPARAVWLPPGIEHAVDMLADIEMRALLIQPE 75

Query: 95  AVTMPTTCCTLK------ISPLCRELIL-TLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147
            +        L+      + PL RE IL      +  QR   +    +  L ++      
Sbjct: 76  QLAQHPAAPRLQSEFVATVGPLLRETILGAFKADSHPQRLALLLELALFELVED----ED 131

Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207
            +  +P+    + R + +M+   P     L   A     S R + RL   ET L+F++WR
Sbjct: 132 ARTFMPMPHDARARRVADMILADPANGSELELLAYSAGASARTITRLFPAETNLTFKEWR 191

Query: 208 QQLQLIMALQGLVKGDT-VQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSP 264
           Q+ +++ A++ L  G T ++++A  LG+ S  +F   F++ +G TP   + R  + +P
Sbjct: 192 QRARIMAAVEALGNGQTSIKQLALQLGFSSVASFGHAFRQIMGMTPSEMMRRSESAAP 249


>UniRef50_A8G994 Transcriptional regulator, AraC family n=12 Tax=Gammaproteobacteria
           RepID=A8G994_SERP5
          Length = 255

 Score =  104 bits (260), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 126/252 (50%), Gaps = 11/252 (4%)

Query: 8   NGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYA 67
           + ++PD  + + +   I A   +  S  H H  GQL+ +  G +  T+  ++ ++PP   
Sbjct: 8   DEFDPDAINNSVLG--IAAELAQHDSGPHWHNMGQLLFSQRGCMRITLNESICLLPPARI 65

Query: 68  VWIPGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELI--LTLANRTTT 124
            WIP  V H  QVT  A    ++++      +      L  S L RE++  + LA+ TT 
Sbjct: 66  AWIPPLVVHRVQVTGVAGYRSVYLDNHRYPGLSPHLEVLSASSLLREVLERIALADFTTQ 125

Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184
             + P +  ++ V  DE+    ++   LP+    ++R +  M    P     L + A + 
Sbjct: 126 WESGP-SANILAVCLDEIRHAQRELTLLPLPKDRRLRQLAGMEEVPP-----LNELARYS 179

Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244
             SE+ ++R+  KETGLS++QWRQQ +LI A++ L +G  +  +A  L + S +AF T F
Sbjct: 180 GASEKTISRIFRKETGLSYQQWRQQWRLIKAIELLAEGYGLSDIAGKLEFSSDSAFSTFF 239

Query: 245 KKGLGQTPGRYI 256
           K   G +P  Y+
Sbjct: 240 KNMTGSSPRAYM 251


>UniRef50_C3JLV5 AraC-family transcriptional regulator n=2 Tax=Rhodococcus
           erythropolis RepID=C3JLV5_RHOER
          Length = 268

 Score =  104 bits (260), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 111/230 (48%), Gaps = 10/230 (4%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
            H+H + Q+     G +       +W +  ++ VW+PG V H   + +   +   +  P 
Sbjct: 42  AHRHPEHQIAWMSEGTMQIAAGGNVWHLHSEHLVWLPGTVLHDMTLLSAGCMIAAYARPD 101

Query: 95  ---AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI--QVLFDELPQQPQQQ 149
                   T    L++  L  +L+  LA+RT         RRL+  ++L+D L   P++ 
Sbjct: 102 LRPGGPRWTQPLVLEVDALSAQLLRHLADRTIDD-----ARRLMSQELLYDILAAAPERH 156

Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209
             L V  +    ++   +   P +   LG+WAG   +S + L R  V +TG++F QWR +
Sbjct: 157 DVLAVPRNAAASSVSARILADPADSRTLGEWAGELGVSSKTLMRAFVADTGITFGQWRTR 216

Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
            ++  +L+ L +G+ V  VA  +GY +++ FI  F++  G TP RY  +L
Sbjct: 217 ARMYASLEMLARGEGVNDVAPQVGYRTSSGFIAAFRETFGTTPARYGGKL 266


>UniRef50_A4CF02 Transcriptional regulator, araC family protein n=1
           Tax=Pseudoalteromonas tunicata D2 RepID=A4CF02_9GAMM
          Length = 265

 Score =  104 bits (260), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 3/222 (1%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H   QL  +  G +    +  L++VPPQ A+W+P  + H         L  L  +   
Sbjct: 41  HAHPWSQLAYSSQGILQIETDQGLFVVPPQQALWLPPNMTHQITCQCPTRLRSLHFQ-DH 99

Query: 96  VTMP--TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153
           +T P      TL + PL + LIL + +     +     +R+I VL D+L   P+Q   +P
Sbjct: 100 ITAPLGDAIQTLAVGPLLQALILEVCHWGRDYQLSTEKQRVIDVLVDQLVSAPKQDFFIP 159

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
             +  +++ +V      P     L  +A     S R L RL +    + F QW+Q+++++
Sbjct: 160 NITDKRLQPIVSHFNHHPESKRTLNDFANQVGASTRTLHRLFLLNFAMGFNQWKQRIRVL 219

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            AL  L +   ++ +A TLGYDS ++FI  FK+ +G  P +Y
Sbjct: 220 KALTLLDQDLPIKDIAATLGYDSDSSFIAAFKQQMGLPPKQY 261


>UniRef50_Q13VV8 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria
           RepID=Q13VV8_BURXL
          Length = 268

 Score =  104 bits (259), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 2/222 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H+H   Q + A +G +          +PP Y VWIP G  H+  +    EL  L+IEP+A
Sbjct: 41  HEHVWWQFLFARNGLMQVQAGATTLTLPPDYGVWIPPGCVHTLWIGEEVELESLYIEPTA 100

Query: 96  VTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTR-RLIQVLFDELPQQPQQQLHLP 153
           V +       + +    R  I         +  E     R ++VL D L   P    +LP
Sbjct: 101 VAIQDQEPRVVMVDEFVRAFIHHGCTSIPVKYDEDGADGRKVKVLLDSLQSLPDAPFNLP 160

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
             + P++  +   +   P     L + AG   MS R   R  ++ TGL +  WRQ+++L+
Sbjct: 161 FPTEPRLLEVCLTIQSAPHLAHTLDESAGLARMSSRTFTRHFLRATGLPYHTWRQRMRLL 220

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            +L+ L    TV +VA T+GY + +AF   FK+  G++P R+
Sbjct: 221 GSLEMLRSDITVTEVALTIGYSTPSAFTHAFKQLFGKSPSRF 262


>UniRef50_B5EUU3 Transcriptional regulator, AraC/XylS family n=29
           Tax=Gammaproteobacteria RepID=B5EUU3_VIBFM
          Length = 260

 Score =  104 bits (259), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 114/235 (48%), Gaps = 1/235 (0%)

Query: 24  IHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTAN 83
           I A      S +H H+KGQL+ A  G ++  + +++ ++PP  AVWIP    H   +T  
Sbjct: 22  IAADVGRHDSGMHYHQKGQLLYAPEGCMSFALSHSMCVLPPTKAVWIPANTPHRAFMTNV 81

Query: 84  AELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELP 143
                L+ +      P     +++  L R LI  +A      + +  T     + ++   
Sbjct: 82  VAYRSLYFDCDKFPCPEDIVMIEVDELLRALINKMA-MWPWDKPKSETLHTTALFWESFY 140

Query: 144 QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203
           +  QQ   LP+ +  ++ T  E + K       L   +     S + + RL  KETG+S+
Sbjct: 141 EAHQQPFSLPLPTGKRLITFSEQVQKPDFLAPDLQTLSKKIGASSKTITRLFKKETGMSY 200

Query: 204 RQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           ++W+QQ +++ +++ L +   V  VA  L + S +AFI+ FKK +GQTP  +I +
Sbjct: 201 QEWKQQWRVLKSIELLCENTQVSDVAFQLDFSSDSAFISFFKKQVGQTPLAFIKQ 255


>UniRef50_A9BQK3 Transcriptional regulator, AraC family n=8 Tax=Burkholderiales
           RepID=A9BQK3_DELAS
          Length = 309

 Score =  104 bits (259), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 24/246 (9%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI---- 91
           H H   Q+ ++L G +  +      + PP  AVWIP G+ H+  +   A+L  +++    
Sbjct: 36  HSHSWAQIAISLDGVLHLSAPQGTLIAPPSKAVWIPPGLVHAVAMVEEADLVSIYVLQDD 95

Query: 92  ---EPSAVTMPTT-----------CCTLKISPLCRELILTLANRTTTQRAEPMT-----R 132
               P    +P+            C  L++SPL RELI  L  ++  Q A          
Sbjct: 96  PAQGPVLPDLPSCGVACNPQDWARCRVLEVSPLMRELITALPKQSDDQPAPDAATLQREH 155

Query: 133 RLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192
            L  +L +EL +  +  L + +    ++R + E +   P +  +L  WA     S R +A
Sbjct: 156 HLSALLLEELRRASEVHLGVNMPQDKRLRMLCEAVVADPTQHESLADWAADTGASPRTVA 215

Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252
           RL  ++ G SF  WRQQ+ L   L    +G  +Q++A  LGY S +AF  M  + +G  P
Sbjct: 216 RLFQQQLGCSFTTWRQQVVLAHGLSLAARGLPIQQIAAELGY-SPSAFSAMVHRTVGMPP 274

Query: 253 GRYIAR 258
            R+  +
Sbjct: 275 ARFFGQ 280


>UniRef50_C8QA12 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b
           RepID=C8QA12_9ENTR
          Length = 282

 Score =  104 bits (259), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 7/225 (3%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE-LCFLFIEPS 94
           H+H  GQL     G +T    + ++  PP+   W+P   EH+       +    L  E  
Sbjct: 48  HRHAAGQLYCLKQGLMTVNTPSGIFANPPRLVGWVPPHFEHAIVGPGQVQGWTVLIDEVL 107

Query: 95  AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           A  +P     +    +   L   LA  T          RL QV  DEL +   Q L LP+
Sbjct: 108 AAPLPDHPVLMSCPAVLELLAERLATLTPALWGSERYHRLGQVFLDELYEATVQPLTLPL 167

Query: 155 SSHPKIRTMVEMMAKGPVEWGA---LGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211
              P++  +  ++   P +      L +WAGF   S R+L+R     TG+S  ++RQ  +
Sbjct: 168 PEDPRLLQIARLLIDSPSDMRTGPELARWAGF---SPRSLSRHWASATGMSLTKYRQTSR 224

Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           L+ +L+GL  G++VQ+VA  +G+++ +++I+ F+   G TPG+Y 
Sbjct: 225 LLKSLEGLAAGNSVQQVAWQVGFENVSSYISAFRHAFGSTPGKYF 269


>UniRef50_D1WVC3 Transcriptional regulator, AraC family n=3 Tax=Actinomycetales
           RepID=D1WVC3_9ACTO
          Length = 283

 Score =  103 bits (258), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 4/227 (1%)

Query: 38  HRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT 97
           HR+ +L+ +  G +T      LWMVPP   +W+P G  H  + +A A     F+ P  V 
Sbjct: 56  HREHELLWSTTGNVTVEAAGHLWMVPPSLGIWLPAGTPHRVRASAGAVTYATFLSPELVA 115

Query: 98  MP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSS 156
           +       + +  L REL+L   N   +  A     RL +V  D +       L +P+  
Sbjct: 116 VDWAGVVGIPMIRLLRELLLHNQNEEMSTEAR---LRLQRVGVDLIRPVRTVSLDIPLPK 172

Query: 157 HPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMAL 216
            P++ T+ E +   P +     +WA    +S R L R   ++TG+S  QWR  +++  AL
Sbjct: 173 TPELLTIAERIIADPADDRTTEEWARMIGLSGRTLMRWFQRDTGVSLTQWRILVRVRSAL 232

Query: 217 QGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVS 263
             +  G  V  V+  LGY + + FI +F++  G TP  Y   +  V+
Sbjct: 233 IDIAAGKPVVAVSRRLGYANPSTFIDLFRQVTGHTPAAYFRSVNGVA 279


>UniRef50_Q212B5 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas
           palustris BisB18 RepID=Q212B5_RHOPB
          Length = 268

 Score =  103 bits (258), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 6/233 (2%)

Query: 29  DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88
           D  T  +HQH  G+L L   G +     N  W++P  +  W+P   EH    T + +   
Sbjct: 35  DVFTRGLHQHPHGELFLLRAGYLKAQSPNGRWLIPAGHLCWVPPFTEHGAD-TDSTQGVR 93

Query: 89  LFIEPSAV-TMPTTCCTLKISPLCRELI--LTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
           +++ P     +P   C ++ + L   +I  LT  +RT     EP  +RL+ VL DE+ + 
Sbjct: 94  IYLAPELCGVLPRDSCVMRNTALILAVIDRLTAPDRTAKVLTEP-EKRLLGVLCDEIERA 152

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
               + LP+    ++    E +   P +   L  +A    MS R+  R    +TGLS  +
Sbjct: 153 RSTPILLPMPQDARLSRTAEKLLGSPNDQSDLDVFAAEAGMSRRSFTRNFKLDTGLSIGE 212

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           WRQ  +L+  +  L  G +V + A  LGYDS ++F+ + ++  G +P + +AR
Sbjct: 213 WRQIARLMHGIDMLAAGKSVTETAFALGYDSISSFVALCQRHTGMSP-KLLAR 264


>UniRef50_A6VY36 Helix-turn-helix-domain containing protein AraC type n=2
           Tax=Gammaproteobacteria RepID=A6VY36_MARMS
          Length = 258

 Score =  103 bits (257), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 1/224 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP-S 94
           H H   Q++  + G +  T+E+   +VP    ++IP    H +      +   +++ P S
Sbjct: 31  HAHPWHQVLYPIAGLLQSTIESKSIIVPHNGMLFIPANAIHKSVSVTKTQFLAVYLNPKS 90

Query: 95  AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
             +      +  ++P  +ELI+ L  +     AE MT  L+ VL D++      ++ L +
Sbjct: 91  TESYGNNAKSCLVTPFLKELIVLLVKQGLDNHAEQMTTNLLCVLRDQIAIAESYEIPLLI 150

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
            +  ++  +   + + P     L +WA     S R L+RL  KE   SF  WRQ ++L++
Sbjct: 151 PNDRRLMAIFVELNQQPDLALTLSEWATKVGASPRTLSRLCAKEFNQSFAMWRQNIRLVL 210

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           +LQ L K  ++Q +A  LGY S +A+I  FK    QTP +Y  R
Sbjct: 211 SLQLLEKNMSIQNIALDLGYQSDSAYIHAFKGLFAQTPSQYRKR 254


>UniRef50_D1VIF5 Transcriptional regulator, AraC family n=1 Tax=Frankia sp. EuI1c
           RepID=D1VIF5_9ACTO
          Length = 250

 Score =  103 bits (256), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 105/243 (43%), Gaps = 15/243 (6%)

Query: 15  HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGV 74
           H     A  I AG D            QL+    GA+T +     W +PP  A+WIP G 
Sbjct: 20  HPPGVAALPIQAGWD------------QLLYTASGAMTISTPAGSWFIPPHRALWIPDGA 67

Query: 75  EHSNQVTANAELCFL-FIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRR 133
           + + +  + A +  L F  P  V  P            REL+L    R      +P+   
Sbjct: 68  QATVRNRSPAAVRNLYFATPLGVAPPRAQAVAVPERFGRELLLHAVRRCPLDLGDPVHAA 127

Query: 134 LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193
           L+ VL D+L   P+  + LP  S P+   +   +   P     L   A     S R L R
Sbjct: 128 LLTVLVDQLRGLPEASVWLPWPSDPRASDLATALVADPA--AGLTSLAHRVGASRRTLER 185

Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253
               ETGLS   WR++ +++ +L  L  G +V + A   GY + +A++  FK+ LGQTP 
Sbjct: 186 AFGAETGLSLGAWRRRARILSSLDTLAAGASVTQAAIEAGYATPSAYVAAFKQELGQTPR 245

Query: 254 RYI 256
            ++
Sbjct: 246 HFL 248


>UniRef50_C3X452 Putative uncharacterized protein n=2 Tax=Oxalobacter formigenes
           RepID=C3X452_OXAFO
          Length = 254

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 108/232 (46%), Gaps = 7/232 (3%)

Query: 31  LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTAN-AELCFL 89
           +  P H   +   +    G +    E   W V P    W+P    +  +   + A +C  
Sbjct: 18  IAQPGHAQNESWFVYLEKGFLAVEDERGYWTVLPGRIGWMPPHFHYEIRAYGHVAGICAS 77

Query: 90  FIEPSAVTMPTTCCTLKISPLCR---ELILTLANRTTTQRAEPM---TRRLIQVLFDELP 143
                   +P     L IS L     E  +T          +P+     RL+QVL DEL 
Sbjct: 78  LTPLLCAGLPEIPSALAISSLVAPILERAVTWQPDGVGGVFQPLPARQERLLQVLLDELR 137

Query: 144 QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203
              Q Q  L +    ++  +   + K P E   + +WA    +S R+++R   +ET ++F
Sbjct: 138 YSSQGQARLLLPKDKRLNYLAREILKNPGERRTVEEWAERMRISSRSISRHFSRETNMTF 197

Query: 204 RQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            QWRQ   LI+A++ L +G++V++ A ++GY++ +AFIT FKK  GQTP ++
Sbjct: 198 AQWRQNASLIVAMKRLAEGESVREAARSVGYENVSAFITSFKKAFGQTPAQF 249


>UniRef50_C7I316 Transcriptional regulator, AraC family n=1 Tax=Thiomonas intermedia
           K12 RepID=C7I316_THIIN
          Length = 291

 Score =  102 bits (254), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 108/224 (48%), Gaps = 3/224 (1%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
            H H +G L L   G +         + P Q   W+P GVEH+ Q          F+ P 
Sbjct: 45  THCHARGTLFLLTEGLVIVETAQGRQLSPSQTIGWMPPGVEHAVQSYGPTAGFGAFLTPQ 104

Query: 95  AV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTR-RLIQVLFDELPQQPQQQLHL 152
               +P    +  ++PL   L+L  A          +TR RL+ VL DEL Q P + L L
Sbjct: 105 FCGDLPAEPTSYPVNPLV-ALVLQKALSWPHDTPLDLTRMRLLLVLLDELRQSPARPLQL 163

Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212
           P     ++ ++   +         L QWA +  +S R+L+R  V ETG+SF QWRQ  +L
Sbjct: 164 PWPQDARLLSIARALLGNIASPRTLEQWARWADISARSLSRKFVLETGMSFAQWRQWARL 223

Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
             AL+ L  G  V+ VA +LGYDS +AFI  F++ LG TP  Y 
Sbjct: 224 TQALEWLATGRAVKDVALSLGYDSVSAFIKTFRQALGTTPSAYF 267


>UniRef50_Q13JN4 Transcriptional regulator, AraC family n=13 Tax=Proteobacteria
           RepID=Q13JN4_BURXL
          Length = 285

 Score =  102 bits (254), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 5/221 (2%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H   Q++ A+ G +   V     +VPPQ AVW+P G +HS  + +  E+  L++    
Sbjct: 40  HSHTWAQVLYAVSGVMWVEVGREALVVPPQRAVWLPAGTQHSIHMMSEVEMRNLYLHERN 99

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEP-MTRRLIQVLFDELPQQPQQQLH-- 151
           V  +       +++ L RELI ++A    T   +P       ++   EL   P+  L   
Sbjct: 100 VGHLSRRSDVFEVNGLLRELITSIAEYEGTGARDPAYLDAAYRLAMLELAHAPRSSLRIA 159

Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211
           LP +S  ++  +   +   P    +  Q A     S R LARL  +E G+ F +WR+Q+Q
Sbjct: 160 LPDASDRRLEALCRAVIDNPSIAISFEQHAASVGASVRTLARLFTRELGVGFAEWRRQVQ 219

Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252
           L +A+  L +G  V  +A +LG+  ++ F  MF++ LG  P
Sbjct: 220 LAVAVSWLAEGRPVSSIARSLGFQPSS-FSDMFRRELGAPP 259


>UniRef50_Q0B8S9 Transcriptional regulator, AraC family n=1 Tax=Burkholderia
           ambifaria AMMD RepID=Q0B8S9_BURCM
          Length = 261

 Score =  102 bits (254), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 102/228 (44%), Gaps = 1/228 (0%)

Query: 33  SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92
           SP H H  GQL+    GA      + L  + P  A WIP  + HS  +        ++I 
Sbjct: 30  SPRHVHSCGQLLYPERGAALLETPHHLVRLGPGQAAWIPPDLPHSILMGRPYRYHSVYIG 89

Query: 93  PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152
                 PT   +  +SPL +ELIL       T  +  +     +V+  E+ + P+    +
Sbjct: 90  AGLYAEPTFSVS-HVSPLLKELILDAERWDDTDASSDVRFWKTRVIVAEIRRAPRVAAGM 148

Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212
           P+   P+I  +   +   P +   LG WA     SE+ L R  VK TGLSF+QWR   ++
Sbjct: 149 PIPDDPRISVICRALEIDPADARMLGDWARQVGASEKTLQRAFVKSTGLSFQQWRTHARM 208

Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260
             AL     G  +  VA  +GY S  A+   F++  G +PGR   R T
Sbjct: 209 TKALAMHRCGARLLDVAVAVGYSSEGAYAHAFRQFYGYSPGRMKPRST 256


>UniRef50_Q2KXY1 AraC-family transcriptional regulator n=5 Tax=Proteobacteria
           RepID=Q2KXY1_BORA1
          Length = 274

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 102/235 (43%), Gaps = 3/235 (1%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI--E 92
            H H   Q++ A+ G +  T E   + + P  A W+P G EHS      AE   L++   
Sbjct: 37  AHTHEWHQVVYAVSGVLMVTAEGRSFAISPNQAAWVPSGTEHSVGSFLGAEYRSLWLADH 96

Query: 93  PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152
           P             +S L + L++  A             R+ +++ D+L +     L L
Sbjct: 97  PGGTLSKGGVAVFGVSALLKALLVEAATLQGNPDESGYFGRIYRLVLDQLCRASPISLVL 156

Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212
              +   +RT+ E +   P +      W     MS R LAR    ETGL+ R WR+QL+L
Sbjct: 157 AWPASAALRTLCETLYNQPADPRGPDDWGRELGMSGRTLARKFFAETGLTLRDWRRQLKL 216

Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSA 267
             A++ L  G  V  +A  LGY S ++FI  F+  +  +P  Y  R+    P  A
Sbjct: 217 FRAIELLESGLDVTAIALELGYGSASSFIFAFRSAMKCSPMAY-KRIRARDPAGA 270


>UniRef50_D1XNW1 Transcriptional regulator, AraC family n=1 Tax=Streptomyces sp.
           ACTE RepID=D1XNW1_9ACTO
          Length = 291

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 113/250 (45%), Gaps = 27/250 (10%)

Query: 22  FCIHAGTDELTSPV----HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77
           F I AG    + P     H H   +L+    G +T  V + ++ V   + +W+P G  H 
Sbjct: 36  FAIVAGLRIPSVPTEWSPHAHPLHELVWVRGGTLTSRVRDRVFTVSTGHGLWMPAGTTHG 95

Query: 78  NQVTANAELC----------FLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRA 127
            +VTA A             F F EP A+ M         +PL   L+  L+    T   
Sbjct: 96  GRVTAGARFYEAFFAPDRAPFAFEEPRAIEM---------TPLLESLLNHLSR---TDLD 143

Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187
                R   V++D L Q  ++Q  L +    +I  + E +   P +  +L +WA    +S
Sbjct: 144 AAARARAESVVYDVL-QPSERQFALQLPGDARIDVIAEALLDDPADCRSLEEWARLLGIS 202

Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247
           +R + R   + TGLSF QWRQ L++  AL  L +G  V  V+  LGY   + FI  F+K 
Sbjct: 203 DRTVTRAFRQATGLSFAQWRQALRVHRALALLSEGLDVTTVSEVLGYAQPSTFIASFRKV 262

Query: 248 LGQTPGRYIA 257
           +G TPG + A
Sbjct: 263 VGTTPGAFSA 272


>UniRef50_Q5LMG8 Transcriptional regulator, AraC family n=1 Tax=Ruegeria pomeroyi
           RepID=Q5LMG8_SILPO
          Length = 238

 Score =  101 bits (252), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 99/221 (44%), Gaps = 4/221 (1%)

Query: 29  DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88
           D   S  H+H + QLI A+ G +    +     +PP Y + +P    H  ++     L  
Sbjct: 17  DGYVSVRHRHPRHQLIYAISGLMMAETDAMSHAIPPGYGLIVPAQQPHEIRMIGAVRLQS 76

Query: 89  LFIE---PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
           L++    P A  +   C  + ISPL  +LI  L          P    L Q++  EL   
Sbjct: 77  LYVRAGLPRADAL-ARCRLVTISPLLAQLIAALCEMANPWPMPPRALHLSQLILIELLAA 135

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
           P   L LP  + P++R + + +   P    +L  WA    MS R  +R    ETGLSF +
Sbjct: 136 PVSPLALPYPTDPRLRRVCDGLIATPASPRSLDDWAAEAGMSRRTFSRHFQLETGLSFGK 195

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKK 246
           W Q+L+   AL+GL KG    +VA  LGY +      M ++
Sbjct: 196 WAQRLRCQAALRGLAKGRPAARVARELGYANAYTMAAMMRR 236


>UniRef50_C6CCZ8 Transcriptional regulator, AraC family n=3 Tax=Dickeya
           RepID=C6CCZ8_DICDC
          Length = 282

 Score =  101 bits (251), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 100/222 (45%), Gaps = 2/222 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           HQH   + + A  G +   +E    +VP  Y VWIP  V H    T+N  L  L++EP  
Sbjct: 38  HQHPFVEFLYAREGGMRMEIEGKTLIVPVLYGVWIPANVPHQILATSNVLLESLYVEPEY 97

Query: 96  VTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTR-RLIQVLFDELPQQPQQQLHLP 153
             +   +   + IS   RE I         Q  E     +++ VL   L Q P     LP
Sbjct: 98  AAIDHDSSKVVVISDFVREFIHYATEHIPEQYDEAGDDGKMVDVLTTLLRQLPDAGFSLP 157

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
                 +  +   + + P     +  WA    MS R  +R   KETG+SF +W+++L+L+
Sbjct: 158 WPESVVLVRVCRDIQQAPDAAHGIEAWAARTGMSVRTFSRRFRKETGVSFSEWKKRLRLL 217

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            ++  L    +V +VA  LGY ST +F   F++  G  P RY
Sbjct: 218 ESIIMLKDNRSVTQVALDLGYSSTASFTFAFRQMFGVPPTRY 259


>UniRef50_D1BGA1 DNA-binding domain-containing protein, AraC-type n=1
           Tax=Sanguibacter keddieii DSM 10542 RepID=D1BGA1_SANKS
          Length = 293

 Score =  100 bits (250), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 18/237 (7%)

Query: 26  AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85
           +G D   S  H H   +L+    G +T    +  +MVP    +WIP GV H+ Q      
Sbjct: 28  SGPDRWDS--HSHDVHELLWGAEGVLTVETADGYFMVPAVLGLWIPAGVAHAVQCAGGTG 85

Query: 86  LCFLFIEPSA---VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL----IQVL 138
               +++       T  TT  T  ++PL REL++ +A       AEPM   +      + 
Sbjct: 86  FWCTYVDADVRPEFTGRTTAVT--VTPLLRELLVHMA-------AEPMRAEVRDASAALA 136

Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198
              L       + LP+ +  ++ ++   +   P +  +L  W    ++S RNL+RL  +E
Sbjct: 137 VALLEAVDMSPMVLPMPTDARLASIARALLDDPGDRRSLDDWGTEVSVSVRNLSRLFHRE 196

Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           TG++F QWR   ++ +A+  L  G +V  V+  +GY + +AF+  F++ LG TPG Y
Sbjct: 197 TGMTFAQWRVHARVRLAVGLLASGLSVGTVSRRVGYSTPSAFVQSFRRVLGHTPGWY 253


>UniRef50_B9K583 Transcriptional regulator n=3 Tax=Alphaproteobacteria
           RepID=B9K583_AGRVS
          Length = 251

 Score =  100 bits (250), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 34  PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93
           P+H H + QL  A  G +    E   W+VP Q AVWIP  V H   V  +A+L  +  EP
Sbjct: 20  PIHAHDEAQLTFAASGMVQVHTEEGRWLVPSQLAVWIPARVPHRVDVLTDADLWMVHWEP 79

Query: 94  SA-------VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146
           SA       V +  T   L+++PL + L+        ++    +  +L   +  EL    
Sbjct: 80  SAAQEWAPPVPLDQTFA-LRVTPLMQSLLEAAFMADVSREKGELVAKL---MLHELTSTA 135

Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206
                LP+ +      + +M         ++ ++A   A S R L+RL   ETGL+F+ W
Sbjct: 136 HAPTFLPLPTSTIGLRVADMALTDHQSLMSIDEFASRAATSVRTLSRLFPSETGLTFKAW 195

Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           RQ+ +++ ++  L KG  + +VA   G+ S  +F   F++    TP +++
Sbjct: 196 RQRARIVQSMDLLAKGKPIARVAADFGFSSAASFSHAFRQVTAMTPTQFM 245


>UniRef50_B9TN09 HTH-type transcriptional repressor of iron proteins A, putative n=1
           Tax=Ricinus communis RepID=B9TN09_RICCO
          Length = 221

 Score =  100 bits (249), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 6/203 (2%)

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFL-----FIEPS-AVTMPTTCCTLKISPLCREL 114
           ++PP    WIP  + H+  V  N     L      + PS  V  P     L++SPL   L
Sbjct: 19  VLPPGRLGWIPPLMPHAASVHGNTLRPGLAGHTIHLAPSLCVGFPAQSLALRMSPLAVSL 78

Query: 115 ILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEW 174
           +  +         +    RL+ V  DE+       LHL +  HP++  M   +A+ P + 
Sbjct: 79  MERMFRWPNGTPPDAAGLRLMNVFLDEMRAAAPDPLHLVMPRHPRLLAMAATIAENPADE 138

Query: 175 GALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGY 234
             L  WA     S R+L R    ETG+S   WRQ  +L   ++ L  G +V  VA +LGY
Sbjct: 139 TDLDAWAQQLGWSRRSLTRHFRNETGMSVVAWRQVARLQKGMELLNGGASVTTVALSLGY 198

Query: 235 DSTTAFITMFKKGLGQTPGRYIA 257
           DS ++FI +F++ LG TP R+ A
Sbjct: 199 DSVSSFIALFRRILGTTPARFAA 221


>UniRef50_B5I4G1 AraC-family transcriptional regulator n=1 Tax=Streptomyces sviceus
           ATCC 29083 RepID=B5I4G1_9ACTO
          Length = 268

 Score =  100 bits (248), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 4/219 (1%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H  GQL  A  GA+    +   W+ P    +W+P    HS++     ++  L + P  
Sbjct: 37  HFHDYGQLRYAARGALVTATQVGTWVTPASRIMWVPPFAVHSSKAYGETDIRVLSL-PVT 95

Query: 96  VT--MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153
           +T  +P        S L RE  L L +      + P  R LI V+  EL +  Q+ L LP
Sbjct: 96  LTGQLPAEPSVFVASALLREAYLALMSEGEPLES-PRARLLIDVVLAELARAAQEPLRLP 154

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
             S  +++ + +++   P     L +       SER L+RL   E  +SF QWR  L++ 
Sbjct: 155 EPSDRRLKAVTDLLHMDPASPATLAELGHRAGASERTLSRLFGSELSMSFHQWRTLLRIQ 214

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252
            AL  L  G +V   A  LG+ + ++FI  F + +GQTP
Sbjct: 215 RALIELSDGASVTATAIRLGWSNPSSFIDAFTELVGQTP 253


>UniRef50_A8L2S5 Transcriptional regulator, AraC family n=3 Tax=Actinomycetales
           RepID=A8L2S5_FRASN
          Length = 263

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 101/224 (45%), Gaps = 10/224 (4%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV---TANAELCFLFIE 92
           H H   QLI    G +        W+VPP  AVW+P GV H++Q    T    L F  ++
Sbjct: 40  HDHTDHQLIYPGTGVLRVVTRVGSWVVPPLRAVWLPAGVAHAHQAHGPTHMHSLAFSDVD 99

Query: 93  -PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151
            P     PT      +  L RE+I  L   T T  A    R L  VL   L    + +L 
Sbjct: 100 DPFGSPDPTVVA---VPALLREIIRAL---TATGLAGADRRDLTAVLLRSLRPVTELRLC 153

Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211
           LP     ++  +   +A  P +   L +       SER L+RL  ++TG++F QWR QL+
Sbjct: 154 LPQPRDDRLVALTAALAADPADPRTLAELGAAVGASERTLSRLFRRQTGMTFPQWRAQLR 213

Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           L   L  L  G+ V  VA   GY + +AF   F+   G TP RY
Sbjct: 214 LHHGLTLLAGGEPVTTVAFACGYSNPSAFTAAFRDAFGVTPARY 257


>UniRef50_C0YIN0 AraC/XylS family transcriptional regulator n=1 Tax=Chryseobacterium
           gleum ATCC 35910 RepID=C0YIN0_9FLAO
          Length = 260

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 126/257 (49%), Gaps = 14/257 (5%)

Query: 9   GYEPDRHHEAAVAFCIHAGTDELTSPVHQHR-KGQLILALHGAITCTVENALWMVPPQYA 67
            ++ D  HE  V   I +      S  H H  K QL+ A  G +T T  +   ++PP   
Sbjct: 9   DFDADSIHEQVVG--IASDMVMHDSGFHFHTTKAQLLYAPSGCMTVTTSDRQLILPPFRM 66

Query: 68  VWIPGGVEHS---NQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTT 124
           +WIP    H      + A   + F  +  S   M +    L ++PL +E+I  +      
Sbjct: 67  LWIPAHEVHRVNFRNIVAYRSIYFD-VSYSRKYMKSDLKVLHVNPLLKEIIERICFWEWP 125

Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVE---MMAKGPVEWGALGQWA 181
             +   T  L++V +DE+ + P+++L L +    +   + E   +    P     L Q A
Sbjct: 126 ALSNDQTN-LLKVFWDEMSKAPEEKLELKMPQDKRFTKIAEEWTLRQSVPPMLKDLAQKA 184

Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241
           G    +E+ ++R+  KETGLS++ WRQQ +L  +++ L +G+++ +V++ L + S +AFI
Sbjct: 185 G---AAEKTISRIFKKETGLSYQDWRQQWRLQRSIELLAEGNSIGEVSYILDFPSDSAFI 241

Query: 242 TMFKKGLGQTPGRYIAR 258
             FKK  G TP +Y+ +
Sbjct: 242 EFFKKHTGTTPLQYLLK 258


>UniRef50_D1BFL9 DNA-binding domain-containing protein, AraC-type n=1
           Tax=Sanguibacter keddieii DSM 10542 RepID=D1BFL9_SANKS
          Length = 280

 Score = 98.6 bits (244), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 112/230 (48%), Gaps = 10/230 (4%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H    L     G +   +++A+W + P   +W+P G  H+++    +  C+ ++  +A
Sbjct: 44  HSHPDAMLAWCYRGTVWVYLQDAVWRLAPGQGIWVPAGTPHTSRHEPGSTGCYTYLPDAA 103

Query: 96  VTMPTTCCT-LKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL---- 150
           +  P    T + ++   +E++L L         +   R  IQ +  E+ QQP  Q     
Sbjct: 104 LVAPVATITRVLVARAVQEMLLHLG----ADDMDDGLRVRIQAVILEMLQQPSLQASDGW 159

Query: 151 -HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209
             +P+ +  ++R +V+ +   P +     +      + ER + R++ ++ G++F +WR  
Sbjct: 160 GEVPLPADERLRPLVQAVLADPGDPRTARELFDAHGLHERTVLRVLQRDVGMTFARWRAG 219

Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
           +++  A + LV G  V  VAH  GY +T+AF   FK+  G TP  ++AR+
Sbjct: 220 VRMTQAARMLVDGTPVGLVAHRTGYGTTSAFSAAFKQRFGMTPREHVARV 269


>UniRef50_Q091X7 Helix-turn-helix, AraC type n=1 Tax=Stigmatella aurantiaca DW4/3-1
           RepID=Q091X7_STIAU
          Length = 279

 Score = 97.8 bits (242), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 125/252 (49%), Gaps = 14/252 (5%)

Query: 18  AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77
           AA +FC+      LT+  H HR+ QL+ A  GA+   V+ A W++PPQ A W+ GG  H 
Sbjct: 12  AASSFCLTDEMPPLTTGWHAHRRHQLLYAARGALHLEVDRAQWLLPPQRAAWLRGGTLHR 71

Query: 78  NQVTANAELCFLFIEPSAV-TMP-TTCCTLKISPLCRELILTLANRTTTQRA--EPMTRR 133
            +      LC +++EPS V T P   C    + PL RE+++  + R   +RA  + +   
Sbjct: 72  ARANHLVTLCTVYLEPSLVPTAPQEECSVFLLPPLAREMLI-YSVRWGPERAPDDTVAES 130

Query: 134 LIQVLFDELPQQPQ--QQLHLPVSSHPKI-RTMVEMMA--KGPVEWGALGQWAGFFAMSE 188
             Q L   L +     Q   LP +  P++ + M   +A   GP+ +    + AG   +S 
Sbjct: 131 FFQTLAHLLAEWSSQGQTWRLPRARTPELEKAMAYTLAHLAGPLSFEEAARAAG---LSG 187

Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKG 247
           R LAR   +E   ++R++    +++ A++ L + G  V + A+ +G++S  AF   F   
Sbjct: 188 RTLARRFDEEAQTTWRRFLHDARMLRAMELLAQDGARVTQTAYDVGFESLAAFTHAFHAF 247

Query: 248 LGQTPGRYIARL 259
            G+ P  +  R+
Sbjct: 248 SGERPRDFRQRV 259


>UniRef50_A8AKK6 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC
           BAA-895 RepID=A8AKK6_CITK8
          Length = 251

 Score = 96.7 bits (239), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 3/230 (1%)

Query: 32  TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ--VTANAELCFL 89
           T+  H H  GQL     G +    E   W + P    W+P  + H     V+A       
Sbjct: 16  TTQWHHHPGGQLYWITRGMVMVETEQGQWALTPGSVGWLPPSLPHCAWMPVSAYGASLHF 75

Query: 90  FIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ 149
            +E   V  P++ C    SP    L+  +    T          L+QV+ DE+       
Sbjct: 76  SVEYCGV-FPSSPCVRAASPFLLLLLEKICGEGTIGEPSERLAHLLQVMVDEIRCADALS 134

Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209
             L +    ++R + + +        +  + A    +S R L+RL +++TGL+F QW+Q+
Sbjct: 135 SQLILPDDRRVRQIAQKILADRACTRSQAELAKQAGLSVRTLSRLFIQQTGLTFGQWKQK 194

Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
            ++I +L+ L++G+ V  VA   GY++ +AFI +F++ +G TPG++  R 
Sbjct: 195 AKVISSLEYLLRGEPVSLVAQLAGYENVSAFIAVFRRFMGMTPGQFYLRF 244


>UniRef50_C3JND7 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus
           erythropolis RepID=C3JND7_RHOER
          Length = 285

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 3/226 (1%)

Query: 30  ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89
           + T  +H+H   +L+ A+ G +       ++ VP   ++WIP  V H     +  EL   
Sbjct: 46  DYTWEMHRHSDHELLWAIDGVLEVRTPETVYTVPSGVSLWIPSFVPHEVTARSGTELSCT 105

Query: 90  FIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ 149
           ++  S VT       L   PL  +++  L     T   +   RR      D +   P+  
Sbjct: 106 WLVASDVTGLDRVVALSTPPLLEQVLDHLTRDDLT---DAARRRAEAFAIDLVEPVPRLI 162

Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209
             +P+ + P +R + + +   P +  ++ +WA    +S R L R    ETGL+F +WR +
Sbjct: 163 FDVPLPTTPWLRQIADQLVASPADTRSVEEWAADAKVSTRTLTRRFPAETGLTFSEWRMR 222

Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           L+   A+Q L  G ++  VA   G+ S +AF   F++ +G TPG +
Sbjct: 223 LRAHHAMQLLALGRSISFVARKTGFRSESAFGAAFRRTMGVTPGEF 268


>UniRef50_Q5FU43 Transcriptional regulator, AraC family n=1 Tax=Gluconobacter
           oxydans RepID=Q5FU43_GLUOX
          Length = 259

 Score = 95.5 bits (236), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 14/231 (6%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H +GQ+     G +    E+A W++ P   +W+P  + H  +         L++  + 
Sbjct: 32  HAHARGQIFGIESGVMAIRTEHAYWLIGPGQCLWLPPHIPHEARSHGAVAGWSLYVSAA- 90

Query: 96  VTMPTTCCTLKISPLCR---ELILTLANRTTTQ----RAEPMTRRLIQVLFDELPQQPQQ 148
                 C  L   P       L+  LA+R +      R +     L +  + E    P+ 
Sbjct: 91  -----RCSNLPDEPFLAGGTRLLTALADRLSHDADETRWDAQISCLAECFWHEFLAAPRA 145

Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208
            + LP     +   +   ++  P +      WA   AMS R+  R    ETGL F  WRQ
Sbjct: 146 SVSLPFPKSEQFCRVANTLSDNPADNRDQKDWAELAAMSLRSFVRHFTLETGLPFSVWRQ 205

Query: 209 QLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
           +L+++ A + L +G++V  VA  +GY+S  AF T F K  G  P  Y ARL
Sbjct: 206 RLRILNAQEKLARGESVASVALDVGYESLGAFATAFHKNTGYRPSDY-ARL 255


>UniRef50_A8U313 Helix-turn-helix, AraC type:Arac protein,
           arabinose-binding/dimerisation n=1 Tax=alpha
           proteobacterium BAL199 RepID=A8U313_9PROT
          Length = 282

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 3/247 (1%)

Query: 15  HHEAAVAFCIHAGT--DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72
           H EA VA   HA +     + P H+H +GQL L L   +     + +W+VP    +W+P 
Sbjct: 22  HVEADVAIIGHAASFAPGASVPWHRHSRGQLALTLARVMRVETPDKVWLVPRGSVLWLPA 81

Query: 73  GVEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131
              H +       +  L++ P SA ++PT    ++      +++  LA    + R +   
Sbjct: 82  ETPHRSLAPEQRLMRSLYVRPDSAESLPTAPTAVEQGTPLADMVTWLAETYDSDRLDKAW 141

Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191
             +       +   P   + LP  + P +  + + +   P    +L  WA  F M+ R L
Sbjct: 142 STVAGAALALVRPGPGVSIRLPQPADPALAVIADAVLADPAVEISLEDWAERFGMAGRTL 201

Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251
            R +  ETG+S+R WR+ L L +A + L+ G  V  VA   GY  T+AF+  F+     T
Sbjct: 202 RRRVQAETGMSYRDWRRILGLTVAAERLLAGSRVTDVAFETGYAGTSAFVAAFRAAFQVT 261

Query: 252 PGRYIAR 258
           PG +  R
Sbjct: 262 PGEFQRR 268


>UniRef50_A0R133 Transcriptional regulator, AraC family protein n=1
           Tax=Mycobacterium smegmatis str. MC2 155
           RepID=A0R133_MYCS2
          Length = 257

 Score = 94.7 bits (234), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 107/230 (46%), Gaps = 3/230 (1%)

Query: 30  ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89
           E+ +P H+HR+ Q +  + G +    E+  W+VP + AV IP   +H+  +   +    L
Sbjct: 26  EVLAP-HRHRRAQFLYGVGGTMDVRTEHGSWLVPTERAVLIPPQTQHAVTMWGVSTRS-L 83

Query: 90  FIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQ 148
           +IEP AV   PT C  + +  L REL++        +  +     L  +   E+      
Sbjct: 84  YIEPGAVPWFPTRCTVVDVPTLLRELLVAAVAVPLDRPPDARDAALFALTLHEVAGCTSL 143

Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208
            L LP+     +          P      G WA    +SER +ARL  KE  ++  +W++
Sbjct: 144 PLDLPLPQPGALSEQCRRFLAAPRIDTTTGWWANALHVSERTVARLFRKELSMTVAEWQR 203

Query: 209 QLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           +  ++ +L+ L +G  V  VA  LGY S  AF TMF + LG +P  +  R
Sbjct: 204 RACVLHSLRQLTQGVAVSAVASDLGYSSPAAFSTMFSRALGTSPSAFSPR 253


>UniRef50_D0J7V7 Transcriptional regulator, AraC family n=6 Tax=Proteobacteria
           RepID=D0J7V7_COMTE
          Length = 271

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 1/225 (0%)

Query: 34  PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93
           P H H +G LI A  G +     +  W+VPP  AVW+  G+ H    T       LF++ 
Sbjct: 39  PQHSHARGHLIYASEGVLLVESPSGQWLVPPTTAVWLRPGMLHQITATTAVRAYGLFVDE 98

Query: 94  S-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152
           + +  +P     L ++PL REL+  L          P    L  +L +EL        +L
Sbjct: 99  AWSAQLPARDGVLHVAPLVRELMTALVALPHEGPHRPRDALLGSLLLEELSALAPLPYYL 158

Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212
           P      +R + E M   P +   +   A   A++ + L R  +K TG+++ +W QQ++L
Sbjct: 159 PWPQDALMRRICESMLSAPAQRTTVEALARQHALTPKTLHRRFLKSTGMNWGRWYQQMRL 218

Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           + ++  L++G  +  VA   GY+S +A+   F++  G+ P  ++A
Sbjct: 219 MASIPQLLQGMAITTVALESGYESHSAYSAAFRRQFGRPPSEFVA 263


>UniRef50_D1BBW6 DNA-binding domain-containing protein, AraC-type n=1
           Tax=Sanguibacter keddieii DSM 10542 RepID=D1BBW6_SANKS
          Length = 257

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 6/220 (2%)

Query: 38  HRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS-AV 96
           H + +L+     AIT      +W+VPP   +W+P G  H      +A +   +++ S  V
Sbjct: 32  HHEHELLWCAGRAITVEARGQVWLVPPTLGIWLPAGTVHRVTAHPDASVFAAYLDTSREV 91

Query: 97  TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL-FDELPQQPQQQLHLPVS 155
               +   + ++PL  EL+L   NR         +R  +Q L  +++       + L + 
Sbjct: 92  PGWDSILGVPVTPLLHELLLH--NRRAAM--PDASRHALQALAVEQMVPLTAATIELRLP 147

Query: 156 SHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMA 215
               +R + E +   P +  +L  WA    MS R   R  + +TG +F QWR   ++  A
Sbjct: 148 RDLALRGVAEQVVADPGDGRSLDAWASSIGMSPRTFMRRFLDDTGSTFAQWRILARVAAA 207

Query: 216 LQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           L  L +G  V  VA  +GY ST  F+ +F++  G TP  Y
Sbjct: 208 LTMLAEGRAVATVARAVGYSSTGTFVALFRRTTGMTPAAY 247


>UniRef50_D1WSG5 Transcriptional regulator, AraC family n=3 Tax=Streptomyces
           RepID=D1WSG5_9ACTO
          Length = 265

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 8/226 (3%)

Query: 34  PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93
           P H H   Q +    G I  T       + P  A+WIP GV HS +   ++ +     EP
Sbjct: 40  PTHVHVFHQFLYVPLGRIVVTALGRDHELSPSVALWIPAGVPHSARFDPDSLVVAETFEP 99

Query: 94  SAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152
               +P T   ++ +S   R+L+L+    +     +P        +F  L    +  L L
Sbjct: 100 DRHRLPYTEITSVNVSDAQRQLLLSRMRSSEVTEEDP-------AVFAVLCSGHRDVLPL 152

Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212
           P  +     T+   + + P +     +WA     S  +L R    ETGL+F +WR +L+L
Sbjct: 153 PRPTGRAAATVAGELMRNPGDPRTASEWAEGLYTSSTSLRRAFRAETGLAFSEWRTRLRL 212

Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
             +L  L  G  V  VA  +G+ ST  +I  F++  G+TPG Y+ R
Sbjct: 213 NHSLHLLAAGHMVSTVAARVGFVSTNGYILAFRRYFGETPGAYVKR 258


>UniRef50_Q1ZV01 Transcriptional regulator, AraC family protein n=2
           Tax=Photobacterium angustum S14 RepID=Q1ZV01_PHOAS
          Length = 283

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 114/240 (47%), Gaps = 16/240 (6%)

Query: 25  HAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANA 84
           H     L S +H H KGQL+    G     +EN+ + + P   +WIP G+ H+  +  N 
Sbjct: 37  HKEEHSLRSKMHSHSKGQLVYIKSGTAIVRLENSTYSILPNQMIWIPSGMIHNVILRNNV 96

Query: 85  ELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQR----AEPMTRRLIQVLF 139
           +   ++I+      +     T  +S L  E+I T+   +         E   + ++ +  
Sbjct: 97  DFRAIYIDQKQFPRLSKNFETFFVSVLLEEIIETICLSSFHTDWMVGTEFHLQSILIMKM 156

Query: 140 DELPQQPQQQLHLPVSSHPKIR----TMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
            +L   PQ        + PK +     +++   KG + +  L +       SER + RL 
Sbjct: 157 QKLSSTPQW------PAFPKDKRVCNYLLKFYEKGEM-FPRLYELVSNTGASERTIHRLF 209

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           V+ TG+S+++WRQ  +L++A++ L    ++ ++AH L + +T+AFI+ FK     TP +Y
Sbjct: 210 VQSTGMSYQKWRQHARLMLAIELLSTNKSITEIAHHLEFSTTSAFISFFKSYQNITPKKY 269


>UniRef50_C0YJ90 AraC family transcriptional regulator n=1 Tax=Chryseobacterium
           gleum ATCC 35910 RepID=C0YJ90_9FLAO
          Length = 270

 Score = 91.7 bits (226), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 118/252 (46%), Gaps = 13/252 (5%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           PD   +    F +H  +++L  P H+H KGQL     G    T++N  ++VP ++  WIP
Sbjct: 8   PDIDKDDKSVFVMHEKSEKLI-PFHKHTKGQLSYVEGGIAYITIDNKTYVVPARHFFWIP 66

Query: 72  GGVEHSNQV--TANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129
            G+EH  ++  TA       F     ++ P     L I P   EL++ +   T     + 
Sbjct: 67  QGMEHILEIGHTATVLRSLYFYAHDDISDP-FYSRLGIYP-ASELLIQMIKYTEIWDEKH 124

Query: 130 MTRR-----LIQVLFDELPQQPQQQL--HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182
           +T +      +  L   LP+  QQ L   LP + H ++  +V  +     E   L   + 
Sbjct: 125 VTAKDENFEFLVALKKILPKTHQQPLPIILPATHHKQMMKIVSYLEWNIGERLTLAHVSS 184

Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDT-VQKVAHTLGYDSTTAFI 241
            F +SER+L+RL   +  +SF Q+ + L+++ A++ L+  D  + ++A  +GY S +AF 
Sbjct: 185 KFGLSERSLSRLFKADMDISFLQYLKTLRIVKAIELLLNTDKPINEIADDVGYSSISAFS 244

Query: 242 TMFKKGLGQTPG 253
             F +     P 
Sbjct: 245 DTFHEFTQSRPS 256


>UniRef50_D1UHS6 Transcriptional regulator, AraC family n=1 Tax=Burkholderia sp.
           CCGE1001 RepID=D1UHS6_9BURK
          Length = 276

 Score = 91.7 bits (226), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 2/225 (0%)

Query: 34  PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI-- 91
           P H H+  Q++ A+ GA+T   +    ++ P+ AVW+P G+ H       +E   L+I  
Sbjct: 31  PEHSHQWHQMVYAISGALTVISDGGSIVISPEQAVWLPTGLRHRVGSLLGSEFRSLWIAD 90

Query: 92  EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151
           E  +     +     +SPL R LI+           +    R+ Q++ D+L +       
Sbjct: 91  ETGSTLAGVSPMVFAVSPLLRALIVEATAIAGQPDDDGYVGRITQLILDQLRRARPLPTA 150

Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211
           LP      +  + E +   P +     +WA    MS R LAR  V ETG+S R WR++L+
Sbjct: 151 LPWPRDDTLAQLCEKLHADPADPRGPEEWAQRLGMSARTLARRFVAETGMSLRSWRRRLR 210

Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           L  A++ L  G  V + A  LGY ST+AFI  F+  LG +P  ++
Sbjct: 211 LFRAIELLGGGMDVTRTALELGYSSTSAFIYAFRLELGSSPQAFM 255


>UniRef50_C7R5F1 Transcriptional regulator, AraC family n=1 Tax=Jonesia
           denitrificans DSM 20603 RepID=C7R5F1_JONDD
          Length = 267

 Score = 91.3 bits (225), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 7/213 (3%)

Query: 48  HGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS----AVTMPTTCC 103
           HG +   +    ++V     +W+P  V H+ + + +A L   F+ P+     ++  TT  
Sbjct: 52  HGTLRVDIAGRTYLVTHTRLLWVPANVTHTLRPSHDA-LLIPFMMPTDPDTTISTWTTVH 110

Query: 104 TLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTM 163
           T++ +     LI  LA    +   E    R +  L D LP+  +  + + +   P+  T+
Sbjct: 111 TIRATGALHSLIRVLAQPALSTAHE--YSRALDQLLDVLPRLKELDIDVALPCDPRAATV 168

Query: 164 VEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD 223
              + + P    +L +WA     S + L RL V++TG++F +WR ++++  AL  L +G 
Sbjct: 169 ATALIENPAHPRSLEEWAKVCYTSAKTLQRLFVQQTGVTFPEWRTRVRVRTALDLLHEGW 228

Query: 224 TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           TV  VA  +GY + + FI  F +  G TP RY+
Sbjct: 229 TVHSVATRVGYSTASGFIAAFSRITGHTPARYM 261


>UniRef50_D1XRU9 Transcriptional regulator, AraC family n=4 Tax=Actinomycetales
           RepID=D1XRU9_9ACTO
          Length = 272

 Score = 90.9 bits (224), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 3/221 (1%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H+HR+ Q +    G +        W VPP+ AV IP    H  ++   +    L+IEP A
Sbjct: 32  HRHRRAQFLYGATGVMVVDTAEGTWTVPPERAVLIPAATRHRVRMLGVSTRS-LYIEPGA 90

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           V   P TC  +++ PL REL+L   +             ++++L  E+ ++     H+ +
Sbjct: 91  VPWWPGTCTVVEVPPLLRELLLVAVDLPLDYSLAGREGSIVELLLHEIAERAPLPFHVAI 150

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
                +  +       P        WA   AMSER   R    ETG S   WR + +L+ 
Sbjct: 151 PVSADLAGLCRAYLAAPDAGVTNAAWAARTAMSERAFTRRFRAETGDSPAVWRSRARLLA 210

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           A+  L++  +V +VA  LGY S  AF   F +  G  P R+
Sbjct: 211 AVP-LLRTASVSEVAGRLGYASPAAFTAAFTRAFGLPPSRF 250


>UniRef50_A5VF29 Transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria
           RepID=A5VF29_SPHWW
          Length = 274

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 107/234 (45%), Gaps = 18/234 (7%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H   QLI A+ G I    + A  ++P   A WIP G  H   V  + +   L+  P A
Sbjct: 40  HDHPYHQLIYAVAGTIQIETDAARHLLPTGRAAWIPAGQRHRTLVH-DVDTASLYFAPDA 98

Query: 96  VTMPTTCCTLKI-SPLCRELIL-------TLANRTTTQRAEPMTRRLI--QVLFDELPQQ 145
           V        + + SP+ RE+IL        +A R    R+   T  L+  + L  ELP  
Sbjct: 99  VADGGGRVRILVASPVMREMILHALRWPQAVAERDPVARSFFGTLALMCGEWLESELP-- 156

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
               L LP + HP I   +++ A  P     L       AMSER+  R   +ETG+ ++ 
Sbjct: 157 ----LSLPGARHPGIVRAMDLAAVDPAGID-LPAALAAAAMSERSFRRAFSRETGMGWQA 211

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
           W  QL+++ A+  L  G  V  VA  +GY S +AF   F +  G+ P  Y +R+
Sbjct: 212 WVAQLRILRAMGMLADGGRVTDVAAEVGYASLSAFAKAFAQLAGEGPADYRSRV 265


>UniRef50_Q7NRR7 Probable transcriptional regulator n=1 Tax=Chromobacterium
           violaceum RepID=Q7NRR7_CHRVO
          Length = 250

 Score = 88.6 bits (218), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 102/233 (43%), Gaps = 12/233 (5%)

Query: 27  GTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL 86
           G     +  H H  GQLI    GA+ C  E   W++      WIP GV HS +  A  EL
Sbjct: 15  GVSRCGTASHVHAVGQLIYLRRGAMLCQSETMRWLMAAGQVGWIPAGVAHSAEPLA--EL 72

Query: 87  CFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEP---MTRRLIQVLFDELP 143
             +     +   P     +++ P    L+  L  R     AEP     +RL   + DEL 
Sbjct: 73  YGVTAYADSAAYPDLPAEVRVMP-AGGLMGLLLERQLRYEAEPWPGRRQRLAGAIVDELL 131

Query: 144 QQ---PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETG 200
           Q    PQQ   LP+ +  ++R +   +         L + A     S  +L R   +ETG
Sbjct: 132 QLVPLPQQ---LPLPAERRLRALCRRVLADLGRGWLLDELAVAHGFSRASLTRAFARETG 188

Query: 201 LSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253
           +SF  W  Q +L+ A++ L  G  V + A  +GY S +AF   F++ LG  PG
Sbjct: 189 VSFGHWLAQARLLEAVRLLSGGAMVGETALQVGYQSPSAFCAAFRRHLGMAPG 241


>UniRef50_UPI000050FCF9 AraC family transcriptional regulator n=1 Tax=Brevibacterium linens
           BL2 RepID=UPI000050FCF9
          Length = 272

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 10/223 (4%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC---FLFIE 92
           H H   +L+    G  T T++   W + P   +WIP GV HS    A   +    F    
Sbjct: 52  HSHPTHELLWREAGVGTVTIDQRTWTITPPLGMWIPAGVRHSGWTPAGVVVYAAQFSLDN 111

Query: 93  PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152
           P     PT    + I+PL R L+  L +      +  +T  +I  +    P   +  LH+
Sbjct: 112 PLVSDRPTA---IAITPLLRLLLDRLQHTDPGTSSYSLTEAMILDVM--TPADNELLLHM 166

Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212
           P  S+P I  +   + +GP +  +L  WA    +S R + R    ETGL F +W    ++
Sbjct: 167 P--SNPLIAPIANAIIEGPADASSLQDWARKLGISGRTITRAFEAETGLGFGRWATTARV 224

Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
             A+  +  G  V + A  +GY S +AF T FK+  G TPG++
Sbjct: 225 QHAVSMISLGGEVDEAAAGVGYRSVSAFTTAFKRITGTTPGQF 267


>UniRef50_A8L421 Transcriptional regulator, AraC family n=12 Tax=Actinomycetales
           RepID=A8L421_FRASN
          Length = 290

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 115/249 (46%), Gaps = 14/249 (5%)

Query: 29  DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88
           + L +  H H   Q+  A+ G +      A +++PPQ A WIP G+EH   +        
Sbjct: 38  ERLVTGWHSHDLHQIEYAVAGVVEVETATAHYLLPPQQAAWIPAGLEHQATMNTAVRTVS 97

Query: 89  LFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAE--PMTRRLIQVLFDELPQQ 145
           +  +P  V  P      L ++PL RE+++  A R    RAE  P+     Q L   + + 
Sbjct: 98  VMFDPRLVPHPGDRARILAVAPLIREMMI-YALRWPIARAEHDPVADGFFQTLGHLVSEA 156

Query: 146 PQQQ--LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203
              +  L LP S+ P I +      +  ++   +G+ +    +SER L R      GLS+
Sbjct: 157 LDHEAPLSLPTSTDP-IVSAAMAYTQNHLDSVTVGEVSRAVGVSERTLRRQFRSTLGLSW 215

Query: 204 RQWRQQLQLIMALQGL-VKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262
           R +  Q +L+ A+    V G +V +V+  +G+D+ +AF   F +  G+TP  Y  R+   
Sbjct: 216 RSYLLQARLLRAMALFAVPGQSVLEVSTAVGFDNGSAFARAFSQYCGETPSSYQRRI--- 272

Query: 263 SPQSAKPDP 271
              SA P P
Sbjct: 273 ---SAAPQP 278


>UniRef50_C0YKZ5 AraC family transcriptional regulator n=1 Tax=Chryseobacterium
           gleum ATCC 35910 RepID=C0YKZ5_9FLAO
          Length = 260

 Score = 87.4 bits (215), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 5/229 (2%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWI-PGGVEHSNQVTANAELCFLFIEPS 94
           H H+KGQL+    G    T+E  ++++P  +AVWI P  V  +N  +   +L  +F + S
Sbjct: 31  HHHQKGQLVYVESGFQYITIEEKIYLLPQNHAVWIPPNAVHKTNSHSEKIKLMIMFADIS 90

Query: 95  AVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ--LH 151
                        + P+ +E+I      +    ++      ++ LF+ELPQ  +    LH
Sbjct: 91  TDNPFYHEISVFSVPPVLKEMIKYSEKWSKLMISDYNETLFLKTLFNELPQFVKHSLTLH 150

Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211
           + +    ++  ++E +    +    +   +    +S R L R+  KETGL+  +++Q L+
Sbjct: 151 ICLPKDKRLTKVIEHLHSHYLNEIKMEDLSDAAFLSFRTLERIFKKETGLTLSKYQQMLR 210

Query: 212 LIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
           +I +L+ L  G  T+ + A+ +GY S  AF   F+  +   P  +I  +
Sbjct: 211 IIKSLELLSSGTLTISETAYEVGYKSVQAFTRSFQAVMQFRPTDFIKTI 259


>UniRef50_D1VDY4 Transcriptional regulator, AraC family n=1 Tax=Frankia sp. EuI1c
           RepID=D1VDY4_9ACTO
          Length = 322

 Score = 86.7 bits (213), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 14/254 (5%)

Query: 29  DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88
           + L +P H H   Q+  A+ G +        +++PPQ A W+P G+ H   +        
Sbjct: 69  ERLVTPWHSHDLHQIEYAMSGVVEVETAGGRYLLPPQQAAWLPAGLSHQATMNTAVRTVS 128

Query: 89  LFIEPSAVTMPTTCCTL-KISPLCRELIL-----TLANRTTTQRAEPMTRRLIQVLFDEL 142
           +  +P  V  P     +  +SPL RE+IL      +A   +   ++   R L  ++ + +
Sbjct: 129 VMFDPRIVPRPGDRARIVAVSPLIREMILYALRWPIARTESDDVSDGFFRTLAHLVAEAI 188

Query: 143 PQQPQQQLHLPVSSHPKIRTMVEMMAK--GPVEWGALGQWAGFFAMSERNLARLIVKETG 200
               +  L LP S+ P +   +    +  G V    + +  G   +SER L R    E G
Sbjct: 189 DH--EAPLSLPTSADPLVAAAMAHTRENLGTVTAATVSRAIG---VSERTLRRQFAAELG 243

Query: 201 LSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
           +S+R +  Q +L+ A+  L + G +V  V+  +G+++ +AF   F   +G+TP  Y  R+
Sbjct: 244 MSWRAYLLQARLLRAMALLAEPGPSVLDVSLAVGFENVSAFARAFALRVGETPSAYRRRV 303

Query: 260 TTVSPQSAKPDPRQ 273
                    P PR+
Sbjct: 304 AADPKPIGGPAPRE 317


>UniRef50_B5H317 AraC-type DNA-binding domain-containing protein n=1
           Tax=Streptomyces clavuligerus ATCC 27064
           RepID=B5H317_STRCL
          Length = 253

 Score = 86.3 bits (212), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 103/248 (41%), Gaps = 28/248 (11%)

Query: 34  PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTA----------- 82
           P  +H +  L     G +        W++PP  A+WIP GV H+  V             
Sbjct: 8   PTRRHPRHLLARVPGGLLAVRTGAGAWLLPPSTALWIPAGVPHATAVLTTPAAPSAPAAP 67

Query: 83  -----------NAELCFLFIEPSAVTMPTTC---CTLKISPLCRELILTLANRTTTQRAE 128
                      +  +  L  +P   T P T      +++ PL   LI  L     T  A 
Sbjct: 68  PAPTAVAAARISGPVVDLAADPLTTTGPGTWRDPTAVRVEPLLSALIDHLGRPGLTPDAR 127

Query: 129 PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSE 188
              RR  +V+ D L   P   +       P+ R +   +A  P +   L  W      S 
Sbjct: 128 ---RRAEEVVLDVLVPLPVISVAAAEPQDPRARAVARALAGDPRDNRGLPAWGSQVGASA 184

Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGL 248
           R LARL + ETGL+F QWR++L++  A+  L     ++ VA  +GY S ++F+  F + +
Sbjct: 185 RTLARLFIAETGLTFGQWRERLRMQAAMPLLASELPIEAVARRVGYGSASSFVAAFHRIV 244

Query: 249 GQTPGRYI 256
           G TP +Y 
Sbjct: 245 GLTPRQYF 252


>UniRef50_C6C927 Transcriptional regulator, AraC family n=2 Tax=Dickeya dadantii
           RepID=C6C927_DICDC
          Length = 271

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 8/226 (3%)

Query: 33  SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92
           +P H+H +GQ +L   G +      + W++    A+WIP    H  +     EL  ++  
Sbjct: 26  NPPHRHPQGQFVLVRQGLLQGFSSQSSWLLKAGMAIWIPPETVHWGETAHQVELLVVYAT 85

Query: 93  PSAVTMPTTCCTLKI-SPLCRELILTLANRTTT-QRAEPMTRR--LIQVLFDELPQQPQQ 148
           P      T  C LK+ +  C  LI+ L  R      A P TRR  L+Q+LF+E+   P  
Sbjct: 86  PEQCQAIT--CPLKLMNASC--LIIGLCERLAAPNSALPDTRRERLLQLLFEEIADSPSS 141

Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208
            L LP+   P+++ + + +   P     L  W      + R L+RL +++TGLSF  W  
Sbjct: 142 PLSLPLPDDPRLKKITDALIATPSLRHNLDSWGKHAGATARTLSRLFMRQTGLSFGAWHD 201

Query: 209 QLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
           +L L  A + L  G     +A  LG+    AF   FK+  G TPG+
Sbjct: 202 RLLLSEAWRQLHAGYNNDALALHLGFSCGDAFGHWFKRIAGLTPGQ 247


>UniRef50_B9T9R1 Putative uncharacterized protein n=4 Tax=Ricinus communis
           RepID=B9T9R1_RICCO
          Length = 915

 Score = 85.1 bits (209), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 1/139 (0%)

Query: 85  ELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELP 143
           EL  L+IEP  A ++P  CC L+ S L  +++  L        ++    RL  V  DEL 
Sbjct: 313 ELRSLYIEPVFAESLPDHCCVLQPSRLLIDIVERLLEYPVNYSSDSPQARLAGVAADELK 372

Query: 144 QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203
             P+  L +P  + PK+  + E     P +   L QW      SER LARL  + TG++F
Sbjct: 373 VAPRTPLQVPKPTSPKLVAIAEHTINHPADNQTLAQWGNKLGASERTLARLFRQNTGMTF 432

Query: 204 RQWRQQLQLIMALQGLVKG 222
            QWRQQ++L +ALQ L + 
Sbjct: 433 PQWRQQIRLSLALQMLAEA 451


>UniRef50_D1BHB2 Transcriptional regulator, AraC family n=10 Tax=Actinomycetales
           RepID=D1BHB2_SANKS
          Length = 279

 Score = 85.1 bits (209), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 97/229 (42%), Gaps = 16/229 (6%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTAN-----AELCFLF 90
           H H   +L+    GA T TV    W V P   +W+P GV HS    A      A+L    
Sbjct: 61  HSHPTHELLWNERGASTATVGPRTWTVTPSIGLWVPAGVRHSGWTPAGTWQRAAQLNTRT 120

Query: 91  IEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRR-LIQVLFDELPQQPQQQ 149
           +  S    P       +  L  + + +     +    E M    L+    + L Q P  +
Sbjct: 121 VR-SISETPVAVDLTPLLTLLLDRLDSDLGEASRATTEAMVLDVLVPAPTELLLQSPTSE 179

Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209
           L  PV         VE +   P +   L  WA    +S R + R  + ETGL F QW   
Sbjct: 180 LLAPV---------VETVLADPADPTTLAAWAARLGVSTRTVTRTFLAETGLGFSQWVAT 230

Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
            +   A+  L +G+ ++ VA  +GY S +AF T F++  G +PGR+ AR
Sbjct: 231 ARTQHAIALLARGEEIEDVALLVGYGSASAFGTAFRRVTGVSPGRFRAR 279


>UniRef50_C9PG34 Transcriptional regulator AraC family n=1 Tax=Vibrio furnissii CIP
           102972 RepID=C9PG34_VIBFU
          Length = 245

 Score = 85.1 bits (209), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 4/223 (1%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H + QL     G +    E   W V      W P G  H  +V  + E   L+++ + 
Sbjct: 20  HTHLESQLFWVNRGILMVEAEQQRWTVASGCLAWNPAGCRHRTEVITDVEGELLYVQDAT 79

Query: 96  V--TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153
           +   MP     ++   L   LI  L+  T    ++   +  + +L  E+   P   L LP
Sbjct: 80  MLDAMPAPKL-IRCDDLTSALIKRLSG-TEYNASDTCEQAWLALLGSEISHAPATPLQLP 137

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
           +    + R +   +   P    +    A  F +S R L RL  ++TG++F  WRQQ +L+
Sbjct: 138 LPEDKRARKVANYLIAEPENRLSQETLAERFGLSSRTLHRLFRQQTGMTFVHWRQQSRLL 197

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
            +L  L  G ++ +VA   GYD+T ++I +F++  G TP  Y+
Sbjct: 198 HSLSLLEAGKSITEVALASGYDNTGSYIQLFRQRFGVTPKLYL 240


>UniRef50_A5EPW3 Transcriptional regulator, AraC family n=3 Tax=Bradyrhizobium
           RepID=A5EPW3_BRASB
          Length = 268

 Score = 84.7 bits (208), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 11/228 (4%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H HR+ QLI A  G +  T     W+VPP  AVW+P    H+  + A++++  L+ E   
Sbjct: 38  HMHRESQLIYASRGTMQVTTPQGRWLVPPDRAVWVPARHAHAIDMLADSQMRTLYFELDW 97

Query: 96  VTMPTTCCTL------KISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ 149
           +        L      ++SPL  + IL L               L+++   EL +     
Sbjct: 98  LRQAARGLRLDREFVVQVSPLLHQAILAL---FAPDGGAERAALLVRLALLELRRAEDSS 154

Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209
             +P+   P+ R    ++   P     L   A     S R L+RL   ET LSF+ W Q+
Sbjct: 155 TFIPLPQDPRARRAALLVLASPATEEDLATLASMVGSSARTLSRLFAAETRLSFKAWCQR 214

Query: 210 LQLIMALQGLVKGD--TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            ++  A++ L      +V+++A  LGY S  AF   F++  G+TP  +
Sbjct: 215 ARIAAAIERLSTDRHLSVKQLAADLGYASVPAFSHAFRQVTGRTPTDF 262


>UniRef50_Q2S7S2 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella
           chejuensis KCTC 2396 RepID=Q2S7S2_HAHCH
          Length = 250

 Score = 84.3 bits (207), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 2/237 (0%)

Query: 24  IHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTAN 83
           +  G D+ +  +H   +GQL     GAI C  +   W+  P+   WIP G +H  +  + 
Sbjct: 12  LDIGADQ-SRDLHARSEGQLYWLEQGAIFCRSDRFHWLTAPRQLTWIPPGCQHDARPLST 70

Query: 84  AELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDEL 142
                L + E     +P     L+   L    +L L               L+QV   E 
Sbjct: 71  VRGVLLHLREDLTFVLPKEPVALEPHRLLEATLLRLIELCPESDWLERHEHLLQVFLWEA 130

Query: 143 PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202
            +    +  LP+   P++  M   + + P     L   A  +  S R L R  ++ETG S
Sbjct: 131 REATPLRQRLPMPHDPRLLRMANSLWRAPESNPGLDALALEYGFSRRTLTRKFMQETGAS 190

Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
             QW Q  +L+ AL+ L   ++V   A  +GY S + F  +FK+  G +PG Y  R 
Sbjct: 191 LSQWTQHAKLLRALELLAANESVSSAAFGVGYQSVSTFCAVFKQVFGMSPGDYKRRF 247


>UniRef50_A5FK83 Transcriptional regulator, AraC family n=3 Tax=Bacteroidetes
           RepID=A5FK83_FLAJ1
          Length = 273

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 110/248 (44%), Gaps = 20/248 (8%)

Query: 22  FCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT 81
           +C H    EL  P H+H K QL+ A    +  T E   + +P ++ +WIP GVEHS +  
Sbjct: 24  YCHHDLMGELFIPPHRHVKAQLLYAEGDVVFVTTETKTYFLPARHFIWIPSGVEHSIEPK 83

Query: 82  ANA---ELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQR---------AEP 129
           + +      +  +E              ++ L  +++L   NR              A+ 
Sbjct: 84  SESVTMRNLYFPVEKDENDFYKVEGIYPVNNLLLQMML-FTNRWNGDLKKGTPNFAIAKA 142

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
           +   L Q+  + LP      L LP     ++  ++  +     E       A  F  SER
Sbjct: 143 IKAILPQICTNNLP------LELPQPKDKRLSKILRYIENNLGETILFADVAHEFGFSER 196

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGL 248
           +L RL  K+ G+SF Q+    +++ A++ L++   +V++VA  +GY+S   F   F K L
Sbjct: 197 SLYRLFQKDLGMSFIQYYTIRRILKAIELLLERKLSVKEVAEEVGYNSVPTFSNTFFKIL 256

Query: 249 GQTPGRYI 256
           GQ P  Y+
Sbjct: 257 GQRPSDYL 264


>UniRef50_C3JVD6 Transcriptional regulator, AraC family n=3 Tax=Rhodococcus
           RepID=C3JVD6_RHOER
          Length = 277

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 120/257 (46%), Gaps = 14/257 (5%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDE-LTSPVHQHRKGQLILALHGAITCTVENALW 60
           +  L ++ +E D   E  V +   +  D+ +T   H HR  +++    G +       +W
Sbjct: 20  IDELVVSEHELDDEPEDLVLWGGASSADQPVTWETHAHRSNEILFPRSGIVVVRSGAQMW 79

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAEL----CFLFIEPSAVTMPTTCCTLKISPLCRELIL 116
            + P   +WIP    HS +V A A+     C +   PS    P     +  +PL  EL+L
Sbjct: 80  TLLPGRGLWIPALHRHSVRVAAGAQFLTVYCAVGQGPSLGDHP---VAVHGTPLLYELLL 136

Query: 117 TLANRTTTQRAEPMTRRLIQVLFD-ELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWG 175
            L+ R  +  A    RR  +V FD  +P   +  + +P  S P  R   ++++  P +  
Sbjct: 137 HLSAREMSDDAR---RRAERVFFDLVVPGDERGAMKIP-DSGPVGRIARDLLSH-PEDPR 191

Query: 176 ALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYD 235
           + G WA    +S   LAR    +TG+SF QWR  L++ +A+  L +   V  VA  +GY 
Sbjct: 192 SFGDWANEIGVSTSTLARRFKVDTGVSFGQWRVLLRMNVAMSLLGQDVAVADVAEQVGYS 251

Query: 236 STTAFITMFKKGLGQTP 252
           + ++F+  FK+  G TP
Sbjct: 252 TPSSFVAAFKQSTGVTP 268


>UniRef50_Q3HKF1 Transcriptional regulator, AraC family n=2 Tax=Rhodobacteraceae
           RepID=Q3HKF1_RHOS4
          Length = 254

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 6/260 (2%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           M R  + G+  D    + V   I + T       H H +GQL       +T      L +
Sbjct: 1   MQRDEIGGFAED---GSPVIGRITSFTPGTMPEAHAHWRGQLAWCPDRPVTVETGGRLHL 57

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANR 121
           + P  A+W+P    H  +     +   L+  P+A  +P       +  L  EL+ TLA  
Sbjct: 58  LSPGMAIWLPPTHRHRIRAEGARKSVSLYTRPAAAPLPKAPTPFPLEALEAELLRTLAGS 117

Query: 122 TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWA 181
           +   R EP   RL  VL+D L +          +  P++R +      G     +L  WA
Sbjct: 118 SRADRQEPAFARLTAVLWDRLARPAPAPTLPLPTD-PRLRRIALAHLDGADH--SLDHWA 174

Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241
              A+S R+L RL  ++TG S+  W + L+L  A+  L+ G +VQ  AH  GY + + F+
Sbjct: 175 AALALSRRSLQRLARRDTGQSWTTWMRDLRLARAIAPLMAGKSVQHAAHAAGYATASGFV 234

Query: 242 TMFKKGLGQTPGRYIARLTT 261
             F+   G TPG+   R+ +
Sbjct: 235 AAFQAAHGITPGQLQRRIES 254


>UniRef50_C8QDM1 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b
           RepID=C8QDM1_9ENTR
          Length = 150

 Score = 81.6 bits (200), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 1/125 (0%)

Query: 134 LIQVLFDELPQQ-PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192
           ++ +LF+EL Q  P     LP  + P++R +  M+   P     L   +     + R +A
Sbjct: 23  ILPLLFNELSQATPAMVGCLPRVTEPRLRALTGMLLAQPDNNATLETLSQQLGTTSRTIA 82

Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252
           RL  + TG++F QWRQQL ++ ++  L +G +V+++A   GY + +A ITMF K LG TP
Sbjct: 83  RLFRQHTGMTFAQWRQQLTIMASIHQLSQGVSVEEIALRQGYCNGSALITMFSKVLGMTP 142

Query: 253 GRYIA 257
            RY A
Sbjct: 143 QRYFA 147


>UniRef50_D0LZ72 Transcriptional regulator, AraC family n=1 Tax=Haliangium ochraceum
           DSM 14365 RepID=D0LZ72_HALO1
          Length = 284

 Score = 81.6 bits (200), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 28/251 (11%)

Query: 33  SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92
           +P H+HR+ Q++ AL G++   V  A W++PPQ A +IP G EH  +   +A L  ++++
Sbjct: 37  TPWHRHRRHQILYALTGSLKLEVTEAQWLLPPQRAAFIPAGCEHRVRCQRSAALRTVYLD 96

Query: 93  PSAV-------------TMPTTCCTLKISPLCRELILTLAN----RTTTQRAEPMTRRLI 135
            +                +    C   ++ L RE++L        R+   RA  +   L 
Sbjct: 97  TATFAAGEDAAAPAPVPVIAAGTCVFSVTSLAREMLLYAMRWGPLRSADDRASEI---LA 153

Query: 136 QVLFDELPQQPQQ------QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
              F  L    ++       L LP    P +    E  A   +   ++ + A   A+S R
Sbjct: 154 DAFFSALALLSREWIRADAGLRLPRPRSPDLSRACE-HALADLAAASMARAAHAAAVSPR 212

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGL 248
            LAR    ET +S+R + +  +++ A++ L + G  V +VA ++G+D+  AF T F+   
Sbjct: 213 TLARRFRDETQMSWRSFLRTARVLRAMELLAEPGARVTEVALSVGFDNPGAFSTSFRALT 272

Query: 249 GQTPGRYIARL 259
           G++P  Y  R 
Sbjct: 273 GESPSSYQRRF 283


>UniRef50_A8LCQ9 Transcriptional regulator, AraC family n=1 Tax=Frankia sp. EAN1pec
           RepID=A8LCQ9_FRASN
          Length = 270

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 13/243 (5%)

Query: 29  DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88
           DEL S  H+H   ++  A+ G          +++PP YA W+P GVEHS  +  N     
Sbjct: 22  DELISYWHRHDLHEVEYAVSGLAEIRTPTTHYLMPPSYAAWVPAGVEHS-PLLRNVTTIA 80

Query: 89  LFIEPSAVTMPTT-CCTLKISPLCRELILTLANRTTTQR------AEPMTRRLIQVLFDE 141
           +F +P+    P +    + + P+ RE+ +  A R    R      A+   R L  V+  +
Sbjct: 81  VFFDPAVFDFPYSRAAVIPVPPVLREM-MRYATRWPIGRGEDDAEADTFFRALAAVVRGQ 139

Query: 142 LPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGL 201
           L    +  L LP +  P +R ++        E  A  +      +SER L R      G 
Sbjct: 140 LAH--EAPLSLPTADDPVVRDVMAYTTDHLAEVTA-ARVCRAVGISERVLRRRFAAVLGQ 196

Query: 202 SFRQWRQQLQLIMALQGLVKGDT-VQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260
           S+R++ +Q++LI A+  L    T V ++A  +G+ S +A    F+   G++P  Y  R  
Sbjct: 197 SWREYLRQVRLIRAMALLSTPTTSVGEIATEVGFGSASALARAFRAWTGESPSAYRDRWL 256

Query: 261 TVS 263
           T +
Sbjct: 257 TTA 259


>UniRef50_C4WPU9 AraC family transcriptional regulator n=1 Tax=Ochrobactrum
           intermedium LMG 3301 RepID=C4WPU9_9RHIZ
          Length = 260

 Score = 79.7 bits (195), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 1/211 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS- 94
           H HR+GQL+    G +T   E   +M+P  YAV +   + H+ +     E+  +++E + 
Sbjct: 45  HSHRRGQLLYGNTGYMTALTEEGAFMLPSGYAVLLRPDLPHAVETFGETEMYSVYVEENI 104

Query: 95  AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           +  +      LK+S L    I  LA            R L  ++ DE+    +Q L +P+
Sbjct: 105 SRDLWEETRVLKVSALLDASIQALAKEPLLYDENGRGRHLSALILDEIRCAGRQPLTVPL 164

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
            +  ++R +   +   P     +  WA    MS R + R   +ETG+SF +WRQ+L+   
Sbjct: 165 PTEKQLRKLCRNLLGNPGLDLTIDDWAEEVGMSRRTMTRKFRQETGMSFIEWRQRLRASH 224

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245
            ++   +G  +   +   GY S +    + K
Sbjct: 225 VMRRQAEGVPLAMASVEAGYQSVSTLRKVMK 255


>UniRef50_A9IG40 Putative transcriptional regulator n=1 Tax=Bordetella petrii DSM
           12804 RepID=A9IG40_BORPD
          Length = 157

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 66/123 (53%)

Query: 133 RLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192
           R ++VL D L   P    +LP  + P++  +   +   P     L + AG   MS R   
Sbjct: 29  RKVKVLLDSLQSLPDAPFNLPFPTEPRLLEVCLTIQSAPHLAHTLDESAGLARMSSRTFT 88

Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252
           R  ++ TGL +  WRQ+++L+ +L+ L    TV +VA T+GY + +AF   FK+  G++P
Sbjct: 89  RHFLRATGLPYHTWRQRMRLLGSLEMLRSDITVTEVALTIGYSTPSAFTHAFKQLFGKSP 148

Query: 253 GRY 255
            R+
Sbjct: 149 SRF 151


>UniRef50_D0KLM1 Transcriptional regulator, AraC family n=2 Tax=Enterobacteriaceae
           RepID=D0KLM1_PECWW
          Length = 218

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 91/204 (44%), Gaps = 2/204 (0%)

Query: 32  TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91
           ++P H+H  GQL     G I      A W V P    W P  + H   V  N     L++
Sbjct: 13  STPWHKHSSGQLYWLREGIIVIETVLAQWTVTPGSVGWFPPDLNHRAWVPGNVIGNSLYL 72

Query: 92  EP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150
           +P S+   P              L L   N +  + +E     +  +L  E+ Q  +  L
Sbjct: 73  DPVSSNHFPYHAGIYGADHFIIAL-LERCNNSHIKHSEEYENLISNLLGYEIRQCSELPL 131

Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210
            L + +  + R +   + K P       Q A  + +S RNL+RL  ++TGLSF QWRQQ 
Sbjct: 132 ELKLPTDRRARNVASELLKNPGCILDQSQLAQKWGLSVRNLSRLFNQQTGLSFSQWRQQA 191

Query: 211 QLIMALQGLVKGDTVQKVAHTLGY 234
           +++ +LQ ++ G  V +VA   GY
Sbjct: 192 KVVASLQWVLLGLPVNEVASLSGY 215


>UniRef50_A9GKK5 Transcriptional regulator, AraC family n=1 Tax=Sorangium cellulosum
           'So ce 56' RepID=A9GKK5_SORC5
          Length = 304

 Score = 77.8 bits (190), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 124/281 (44%), Gaps = 34/281 (12%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPV---HQHRKGQLILALHGAITCTVENA 58
           + RL L+       H  A AF      DEL   V   H H + QL+  L G     VE+A
Sbjct: 41  LARLGLD-------HAGARAFSYE---DELRGAVYGWHTHARHQLLCPLAGTARLEVEDA 90

Query: 59  LWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTL-KISPLCRELILT 117
            +++PPQ A  IP G  H+     +A +  ++ EP+A   P     + +I  L RE+++ 
Sbjct: 91  SFLLPPQLAALIPAGERHAT-TCGDASIVSIYFEPAAFPSPLAAVRIFEIPALLREMVIY 149

Query: 118 -----LANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPV 172
                +A R     A      +  ++   L +       LP      ++  +E   +  V
Sbjct: 150 ARRWPVARRPDDAAANTFFAAMADIIGPLLDR--GATYRLPRGKTRPVQRAIECALRD-V 206

Query: 173 EWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKG--DTVQKVAH 230
               L + A F   +ER L R   +ETG+++R +  + +++ A+  L+ G   +V +VA 
Sbjct: 207 ASADLPRAAAFAGATERTLRRRFREETGVTWRGFVTRARVLRAID-LLSGPSASVTQVAL 265

Query: 231 TLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSAKPDP 271
            +G+ S  AF   F+   GQTP  +         ++A+P P
Sbjct: 266 DVGFQSLGAFAAAFRAVTGQTPSEFR--------RTARPSP 298


>UniRef50_A6GAR4 Putative transcriptional regulator n=1 Tax=Plesiocystis pacifica
           SIR-1 RepID=A6GAR4_9DELT
          Length = 262

 Score = 74.7 bits (182), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 107/249 (42%), Gaps = 27/249 (10%)

Query: 19  AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78
           A+ F I        S  H HR+ QL+ A+ G +     +  W++P   A WIP G  H  
Sbjct: 16  ALGFGIDETYRGFVSDWHSHRRHQLLHAVEGNLELEDSHGRWLLPEAQAAWIPAGQRH-R 74

Query: 79  QVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137
             +A A L  L++ PS V   P      ++  L   L+         +R +   R L   
Sbjct: 75  VSSAGARLQTLYLAPSLVAQPPAETAVFQLPALGHALLARALGWPHHRRLDRRARALFVC 134

Query: 138 LFDE------------LPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185
           + +E            LPQ   Q L         +R +V+ +  GP     L + A    
Sbjct: 135 VAEEFAAWSLEPGPWRLPQPRSQALAA------AMRHVVDNLEDGPT----LAEAARQAG 184

Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVK--GDTVQKVAHTLGYDSTTAFITM 243
           +S R+L R    ETG SFR++    ++I A Q L++  G  V  VA+ LGY S +AF T 
Sbjct: 185 VSARSLERRFRAETGSSFREFLLTARMIEA-QRLLREPGARVSSVAYRLGYSSPSAFSTA 243

Query: 244 FKKGLGQTP 252
           F   +GQ P
Sbjct: 244 FLARVGQRP 252


>UniRef50_UPI000197B237 hypothetical protein BACCOPRO_02201 n=1 Tax=Bacteroides coprophilus
           DSM 18228 RepID=UPI000197B237
          Length = 274

 Score = 74.7 bits (182), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 116/241 (48%), Gaps = 12/241 (4%)

Query: 27  GTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH---SNQVTAN 83
           G  E+  P H H K Q+I  L G +   + +  + VP ++  WIP G EH   SN    +
Sbjct: 26  GWKEVNLPGHVHGKCQIIYTLAGTLHVEIGSESYFVPEKHIAWIPQGAEHKLSSNSRQVS 85

Query: 84  AELCFLFIEPSAVTMPT-TCCTLKISPLCRELILTLAN--RTTTQRAEPMTRRLIQVLFD 140
             + ++ + P     P         + L  E +  +A+  +   ++ +P         F+
Sbjct: 86  MVIFYVSLRPEGKDDPKGEFAIYTANRLIGENLKFIASKGKMIEKQEQPDLYHFALGFFN 145

Query: 141 ELPQ-QPQQQL---HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196
            LPQ  P ++L    L +    ++  ++  +     E   + + A  + +S RNL+RL  
Sbjct: 146 LLPQMSPGKELLLKSLVIPDDSRLYPILRYLTDHVQEELRMDEVALRYNLSTRNLSRLF- 204

Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           +E+ + F  +  +L+++ A++ +  G  T+Q++A+ +G++++  F  +F++  GQ+P  Y
Sbjct: 205 QESNIHFSSYVNRLRIMRAIELMTDGGRTMQEIAYAVGFNNSNHFNRVFRQVTGQSPKNY 264

Query: 256 I 256
           +
Sbjct: 265 L 265


>UniRef50_Q1LNA3 Transcriptional regulator, AraC family n=1 Tax=Cupriavidus
           metallidurans CH34 RepID=Q1LNA3_RALME
          Length = 197

 Score = 74.3 bits (181), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 74/164 (45%)

Query: 95  AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           ++ +P      + S L   ++  L     +  ++    RL++ L DEL   P Q + LP 
Sbjct: 23  SLDLPGRPTAFRQSALSAAILERLPGSGVSSASDKRELRLLEALVDELGLLPPQPMCLPY 82

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
               ++  +   +        +L   A    MS R+L R    ETG+S  +WR   ++  
Sbjct: 83  PKTSRLADIARKIIDDLAVANSLDDMAALAFMSRRSLTRQFRAETGMSIVEWRDAARMQR 142

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           A+Q L  G +V  +A+TLGYD  + FI  F    G TP ++  R
Sbjct: 143 AVQLLAAGHSVTSIAYTLGYDGASRFIDKFSATFGVTPKQFSLR 186


>UniRef50_B4R9V1 Transcriptional regulator, AraC family n=1 Tax=Phenylobacterium
           zucineum HLK1 RepID=B4R9V1_PHEZH
          Length = 198

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 7/161 (4%)

Query: 98  MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLF-DELPQQPQQQLHLPVSS 156
           +P+    + +S L + LI  + +      A P  RR + +LF DE+  +P   L +P  +
Sbjct: 40  LPSRPGVVPVSALLKALIGGIPD------AGPARRRRLALLFADEVHLEPAPALFIPELA 93

Query: 157 HPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMAL 216
              +  +   +   P +   L  WA    +S R LAR   +   L+F  +R+Q++L  AL
Sbjct: 94  GRLLGVLAAALRADPADERTLAAWAAELGVSSRTLAREFERRAQLTFTAYRRQVRLRAAL 153

Query: 217 QGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
             + +G ++ +V   LG+ S + FI  F+   G TP RY A
Sbjct: 154 IRMAEGQSITQVGLDLGFGSASNFIRAFRAATGVTPARYFA 194


>UniRef50_B5CUH6 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM
           17135 RepID=B5CUH6_9BACE
          Length = 268

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 20/245 (8%)

Query: 27  GTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS-NQVTANAE 85
           G +E+  P H H K Q+I  L G +   + +  + VP ++  WIPG  EH  +       
Sbjct: 26  GWEEIKLPGHAHEKCQIIYTLSGTLHVQIGSTSYFVPEKHIAWIPGSTEHELSSKNRQVS 85

Query: 86  LCFLFIEPSAVTMPTTCCTLKI----SPLCRELILTLANRTTTQRAE-PMTRRLIQVLFD 140
           L   ++   A    T      I    S +   L    +  T  ++A+ P         F 
Sbjct: 86  LVIFYLSMDADDKDTALKEFSIYHTNSFIAENLKFIASKGTEIEQADSPDLYTFALSFFK 145

Query: 141 ELPQQPQ------QQLHLPVSS--HPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192
            LP   Q      + L +P  +  HP +  + E +     E   + Q A  F  S RNL+
Sbjct: 146 LLPSISQDMGFLLKMLAIPNDARLHPILAYLQEHLH----ENLKMPQLAAHFGFSVRNLS 201

Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQT 251
           RL   E+G+ F  +   L+++ A++    G  T+Q++A+ +G+ +   F  +F++  G +
Sbjct: 202 RLF-NESGIRFSYYVNNLRIMRAIELFADGGRTMQQIAYEVGFATPNHFNRVFRQITGVS 260

Query: 252 PGRYI 256
           P  ++
Sbjct: 261 PNAFV 265


>UniRef50_UPI00016AD7BA helix-turn-helix- domain containing protein, AraC type n=1
           Tax=Burkholderia thailandensis MSMB43
           RepID=UPI00016AD7BA
          Length = 183

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 65/124 (52%)

Query: 133 RLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192
           +L+ +L  E+    +  LH P+   P++      +   P     L   A    MS R + 
Sbjct: 54  KLMALLVAEMASMRRLSLHAPLPIDPRLARACRRLFDAPSIAIGLDAMAAEAGMSRRTMT 113

Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252
           RL   +TG SF +WR+Q+ L+ A++ L +G  V +VA   GY S +AF + F++ LG+ P
Sbjct: 114 RLFRMQTGESFAEWREQVCLLAAIERLSEGQAVTRVALDRGYASPSAFPSAFRRVLGEAP 173

Query: 253 GRYI 256
            R++
Sbjct: 174 TRHL 177


>UniRef50_Q28SV1 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1
           RepID=Q28SV1_JANSC
          Length = 252

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/222 (22%), Positives = 100/222 (45%), Gaps = 8/222 (3%)

Query: 40  KGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-M 98
           +  L+ A+ GA+  +V    W++PP +A W+P     S  +      C +   P   T +
Sbjct: 27  RDYLLYAIRGALRVSVAGESWLLPPSFAAWLPANTPISVDIDKPVTTCSVLARPGLCTGL 86

Query: 99  PTTCCTLKISPLCRELILTLA----NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           P   C  ++SP+ R++I        +     +AE     L+ V  D   +     +  P 
Sbjct: 87  PEKACVFQMSPMARQMIHYCKDWGPDAAHPAQAEGFFLALLHVCADLAVK--SVDVKRPT 144

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
           ++ P +R  +++      +     + A    +SER++ R    + G+++ Q   QL++I 
Sbjct: 145 ATDPVLRKAIDITEAHLAQAITANEIARKVNLSERSMQRHFQMDVGMTWSQTLTQLRMIH 204

Query: 215 ALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           A+  L +G  ++ ++A   G+ S +AF   F+     TP ++
Sbjct: 205 AVALLAEGKLSIIQIAGYTGFQSLSAFNRAFRTFAATTPTKF 246


>UniRef50_A3XQJ9 Probable transcription regulator protein n=1 Tax=Leeuwenhoekiella
           blandensis MED217 RepID=A3XQJ9_9FLAO
          Length = 261

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 116/247 (46%), Gaps = 16/247 (6%)

Query: 21  AFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV 80
           +  +H    E   P+H H+K Q+     G      +N  +  P ++ +WIP G+EH+   
Sbjct: 14  SIYVHHSKIEEQLPMHSHKKHQISYVEGGVAFLNTKNNSFFFPARHFIWIPAGLEHNVTS 73

Query: 81  TANAELCFLFIEPSAVTMPTTCCTLK--ISPLCRELILTLANRT---------TTQRAEP 129
             + ++      P+ + +P T    K  I P+   L++ + N T         T   A  
Sbjct: 74  RTSVKMVHNLFFPADL-IPETEILKKAGIFPVSN-LLMEMINYTQRWNGDILRTDAEAFE 131

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
               L  ++  E+ + P   + LP +++  +R +++ +     +   L + A  F  S R
Sbjct: 132 FLIALRNIIL-EVAKTPFPVV-LPTTTNEMLRPILKYIHLNVDQPLYLEEVAAHFGYSAR 189

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGL 248
           +L+RL  K    SF Q+ +  ++I +++ L+K D ++ +VA+  GY+S +AF   F + +
Sbjct: 190 SLSRLFQKNIETSFLQYVKLTRIIKSIELLLKTDLSISEVAYASGYNSLSAFSYAFNQIV 249

Query: 249 GQTPGRY 255
            Q+P  +
Sbjct: 250 NQSPAAF 256


>UniRef50_C5PU57 AraC family transcriptional regulator n=1 Tax=Sphingobacterium
           spiritivorum ATCC 33861 RepID=C5PU57_9SPHI
          Length = 271

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 111/245 (45%), Gaps = 24/245 (9%)

Query: 31  LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGG-----VEHSNQVTANAE 85
           L +  H H+  QLI   +G +    E     +P +Y  WIP G     +  S Q+    +
Sbjct: 28  LNTSFHHHQLDQLISPENGVLYLHTEGDTLYIPDKYYAWIPSGTIYKLISKSEQI----K 83

Query: 86  LCFLFIEPSA----VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDE 141
           L  LF+EP           +      + L  EL+    +    +R   +    I  +   
Sbjct: 84  LRTLFLEPEKNEFHADFFNSLAVYAPNTLIEELLQFGFSHWKKERDPELKEYCIAAIRHI 143

Query: 142 LPQQPQQ--QLHLPVSSHPKIR---TMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196
           LP       +L +P  +   ++   T ++   KGP++   L Q    F +SER L+R   
Sbjct: 144 LPVALSTPLKLFVPAPASEVLQESITYIQNHIKGPLDIQHLAQK---FHLSERTLSRWFK 200

Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGD--TVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
           KETG +  Q+ + +++  AL+ L++     + ++ H +GY+S +AF T+FK+ +G++P  
Sbjct: 201 KETGSTLFQFVKSVRVQKALE-LIENSRMDIIEIMHAVGYNSLSAFSTVFKELIGESPQE 259

Query: 255 YIARL 259
           Y  R 
Sbjct: 260 YKKRF 264


>UniRef50_C7PA31 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga
           pinensis DSM 2588 RepID=C7PA31_CHIPD
          Length = 264

 Score = 71.2 bits (173), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 119/263 (45%), Gaps = 13/263 (4%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           MH L     E D H ++   + +H   +   S +H H KGQL     G   C + +  ++
Sbjct: 1   MHLLADYLNEIDVHPDSV--YVMHEKVERKFS-MHSHIKGQLTYVEGGIAFCNMPDKSYV 57

Query: 62  VPPQYAVWIPGGVEHSNQV--TANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLA 119
           +P ++ +WIP   EH  Q+  + +     L+       +      L I P+  +L+L + 
Sbjct: 58  IPARHYIWIPKQQEHYMQIRHSKSTTTRNLYFYSQDDHLTPFYNKLGIYPV-NDLLLEMI 116

Query: 120 NRTTTQRAEPM----TRRLIQVLFDELPQQPQQQL--HLPVSSHPKIRTMVEMMAKGPVE 173
           N +       +      R +  + D LP      L   LP + H ++R +++ +A+   +
Sbjct: 117 NYSARWERHVLPGDPGFRFLSSIKDILPDISTSALPVALPTTQHERLRPVLQYIAQSFDQ 176

Query: 174 WGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTL 232
              L   +  F +S R L+RL      +SF Q+ Q L+++  ++ +++ + T+ ++A+  
Sbjct: 177 QLTLESVSSQFDLSPRTLSRLFTNILDMSFVQYLQTLRVVRGIEMILQTNQTLSEIAYQT 236

Query: 233 GYDSTTAFITMFKKGLGQTPGRY 255
           GY S  AF  +F +   + P  +
Sbjct: 237 GYSSIAAFSKVFYQLTNKRPSSF 259


>UniRef50_A5KTY3 Transcriptional regulator, araC family protein n=5 Tax=Vibrionales
           RepID=A5KTY3_9GAMM
          Length = 262

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 99/230 (43%), Gaps = 31/230 (13%)

Query: 32  TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91
           +S VH H    L+    G    + +    +  P   ++IP GV H       +++  L +
Sbjct: 41  SSEVHSHDYSHLVFIHQGCQIISTDKDSLLSMPGSLIYIPAGVPHRADALKQSQVSLLRL 100

Query: 92  EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDE---------- 141
              ++   T  C L ISP+  +L     N    Q+ EP     IQVL D+          
Sbjct: 101 PLGSIPELTEICILDISPIVTQLFSLWKNGGPEQKLEP---HYIQVLMDQCTRCKAVDNP 157

Query: 142 -LPQQPQQQLHLPV----SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196
            + ++   +  LPV    S+ P I+  +  ++K   + GA          S R L RL +
Sbjct: 158 LIAKEGMDRRLLPVIDALSNKPSIKLSISDLSK---QTGA----------SVRTLNRLFL 204

Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKK 246
                SFR+ RQ++ +  A + + KG +  ++A  L Y S +AF T FK+
Sbjct: 205 TSFKASFREVRQKVVMERAEKMMAKGISATEIAFELEYSSLSAFSTAFKE 254


>UniRef50_B5GU05 HTH-type transcriptional repressor n=1 Tax=Streptomyces
           clavuligerus ATCC 27064 RepID=B5GU05_STRCL
          Length = 502

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 84/199 (42%), Gaps = 20/199 (10%)

Query: 68  VWIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELIL--TLAN---- 120
            W+P GV +S  +   A L  L   P  + T+P         P   + +L   +AN    
Sbjct: 298 AWLPAGVRNSVTLPRGALLLPLGSRPGPSATLPGEVLVQSFPPQAEDGLLHTAVANYSFV 357

Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVS----SHPKIRTMVEMMAKGPVEWGA 176
           R        +TRR +++              LP +    S   +  ++E + + P     
Sbjct: 358 RPEGHDPNGITRRFLEL---------SSAAALPTAADGPSASAVSRIIEELRRAPASPRT 408

Query: 177 LGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDS 236
           L QWA   A+  R L    +  TG ++ QWR QL++ +A Q L +G TV + A TLGY  
Sbjct: 409 LVQWATALAVDARALGHDFLDATGQTYPQWRAQLRMTLARQYLEEGMTVTRAARTLGYAD 468

Query: 237 TTAFITMFKKGLGQTPGRY 255
            +A   +F +  G  P  Y
Sbjct: 469 ASALSRVFTRAHGMPPSAY 487



 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 77/200 (38%), Gaps = 15/200 (7%)

Query: 67  AVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCT-LKIS---PLCRELILTLANRT 122
            +W+P G+ +   V A +    +F  P+A + PT     L++         LI   A   
Sbjct: 22  GLWVPAGLPYEIDVEAGSVAVPIF--PAARSRPTAIDRPLRVDFPDSWSDWLIHQFARSL 79

Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLH-------LPVSSHPKIRTMVEMMAKGPVEWG 175
              R       L+ ++ D  P  P            LPVS  P+  T+   + + P    
Sbjct: 80  GHLRGAADDSGLLDLVADARPADPADGHRGPLPTPPLPVS--PEALTVARTLLQNPSHSA 137

Query: 176 ALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYD 235
            + + A   ++  R   +  ++ETGL F +WR   ++  A   L  G  +      +G+ 
Sbjct: 138 GVDELARSVSVGVRTFQQQFLRETGLPFTRWRTAARVAAAASYLGLGHDIGWTGRQVGFA 197

Query: 236 STTAFITMFKKGLGQTPGRY 255
           +   F   F+   G TP  Y
Sbjct: 198 TPAGFTKAFRAYTGVTPSTY 217


>UniRef50_B3JKA4 Putative uncharacterized protein n=1 Tax=Bacteroides coprocola DSM
           17136 RepID=B3JKA4_9BACE
          Length = 267

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 23/237 (9%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H K Q+I  L G +        + VP ++  WIP    H  ++++N+    L I    
Sbjct: 35  HAHEKFQIIYTLSGTLHVETGGVNYFVPEKHIAWIPEKASH--KLSSNSRQVSLIIFYIN 92

Query: 96  VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTR-------RLIQVLFDELPQQPQ- 147
           + +       + S      I+    +    + + +TR             F+ LPQ    
Sbjct: 93  LNITPDDGKNRFSIYSTNGIIAENLKFIASKGKVITRGKQTDLYNFALSFFNLLPQMTLG 152

Query: 148 -----QQLHLPVSS--HPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETG 200
                + L +P  S  HP +  + E +     E   + Q A  + +S RNL+RL    +G
Sbjct: 153 ADFLLKTLVIPNDSRLHPILNYITEHIH----EDLNMEQIASQYNLSVRNLSRLF-NTSG 207

Query: 201 LSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           + F  +   L++  A++ L  GD TVQ+VA+ +G+++   F  +FK+  G++P  YI
Sbjct: 208 IHFSNYVNHLRITRAIELLTDGDNTVQEVAYKVGFNTPNNFNRVFKQVTGKSPKTYI 264


>UniRef50_A6ED21 Transcriptional regulator, AraC family protein n=1 Tax=Pedobacter
           sp. BAL39 RepID=A6ED21_9SPHI
          Length = 271

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 7/227 (3%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGV----EHSNQVTANAELCFLFI 91
           H H+KGQL     G I        + +P ++ VW+P GV    EH  + T    + F   
Sbjct: 34  HHHKKGQLTYVEGGVIFLYTREQSYFIPARHYVWVPAGVTHHLEHRYRSTIVRNVYFNAK 93

Query: 92  EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151
                +         ++ L  E++    N              ++ L   LP   +  L 
Sbjct: 94  NEIDHSFFDHIGIYPVNDLLLEMLKFSENWNGNIYPGSFEYGFLETLKSILPAISKHPLP 153

Query: 152 L--PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209
           +  P + + ++R ++  + +   E   L + A     SER L+RL       SF Q+ + 
Sbjct: 154 IVVPTTDNERLRPVLWYIRQHLSEELTLEKIALETGFSERTLSRLFQASLKTSFFQYLKL 213

Query: 210 LQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           +++  A++ L++ D TV ++A+ +GYDS  AF   F K  GQ P  +
Sbjct: 214 VRMTRAMEKLLETDRTVTEIAYEVGYDSIAAFSNTFYKMTGQRPSAF 260


>UniRef50_Q1QZK4 Transcriptional regulator, AraC family n=1 Tax=Chromohalobacter
           salexigens DSM 3043 RepID=Q1QZK4_CHRSD
          Length = 266

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 7/224 (3%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
           +H H   Q+ +      T  + + +  +P   A+ +P G +H+  +T+        I   
Sbjct: 35  LHSHGYHQIAMCEQPGATLLLGSQVVSIPWNGALLVPSGTDHA--LTSETRCVIRCIYFK 92

Query: 95  AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV-LFDELPQQPQQQLHLP 153
           A    T+  +L ++ L +ELI  ++    T+R    +RRL++  L+D++ Q         
Sbjct: 93  AALPSTSIGSLFLNRLTKELIKEISTSYVTER----SRRLMEACLYDQIGQLLWSSGSGM 148

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
           +     +R + + +   P +   +   A    +SER+L RL   E G +  Q R + ++ 
Sbjct: 149 MPPSRSLRVICKHIFDTPEDDTPVATLAKDAGLSERSLRRLARDELGCTISQIRTRCRIY 208

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
            A Q L  G  V+ +A  +GY S +AF + F++ +G +P R+ A
Sbjct: 209 KATQLLQAGVPVKLIAADVGYQSNSAFFSAFREIMGMSPARFQA 252


>UniRef50_C2FVA1 AraC family transcriptional regulator n=1 Tax=Sphingobacterium
           spiritivorum ATCC 33300 RepID=C2FVA1_9SPHI
          Length = 263

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 113/246 (45%), Gaps = 26/246 (10%)

Query: 31  LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGG-----VEHSNQVTANAE 85
           L +  H H+  QLI   +G +    E     +P +Y  WIP G     +  S Q+    +
Sbjct: 23  LNTTFHHHQLNQLISPANGVLYLHTEGDTLYIPDKYYAWIPSGMIYKLISKSEQI----K 78

Query: 86  LCFLFIEPSAVTMPTTCC-TLKI---SPLCRELILTLANRTTTQRAEPMTRRLIQVLFDE 141
           L  LF++P    + +    TL +   + L  EL+          +   +    +  L   
Sbjct: 79  LTTLFLKPEKNEIQSDFFNTLGVYAPNTLIEELLQFGFRHWQETKHAGLKESCMAALKRI 138

Query: 142 LPQQPQQQLHLPVSSHPKIRTMVEMMA------KGPVEWGALGQWAGFFAMSERNLARLI 195
           LP      L L V + P+   ++E++         P ++  L Q    F +SER L+R  
Sbjct: 139 LPVVLSTPLKLFVPA-PESEVLMEIITYIQKHLNSPSDFQQLAQR---FNLSERTLSRWF 194

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQ--KVAHTLGYDSTTAFITMFKKGLGQTPG 253
            KETG +  Q+ + +++  AL+ L++   ++  ++ H +GY+S +AF T+FK+ +G++P 
Sbjct: 195 KKETGSTIFQFVKSVRVQKALE-LIESSNMEIVEITHAVGYNSLSAFSTVFKEFMGESPQ 253

Query: 254 RYIARL 259
            Y  R 
Sbjct: 254 EYKKRF 259


>UniRef50_C3JMH4 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus
           erythropolis RepID=C3JMH4_RHOER
          Length = 538

 Score = 67.0 bits (162), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 21/231 (9%)

Query: 39  RKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS--AV 96
           R   L   L G+      + ++ VP    +WIP GV +S +  +++    + + PS    
Sbjct: 27  RSPLLFWVLAGSGRVRTGSTVYEVPAGELLWIPAGVRYSMETDSDSVAFPILLPPSNGVS 86

Query: 97  TMPTTCCTLKISP-----LCRELILTLANRTTTQRAEPMTRRLIQVLFDE----LPQQPQ 147
             P T   L++ P     L  E +  L        A P +   +    D+    LPQ PQ
Sbjct: 87  AGPATVTRLRVPPGWEDRLIHEFVHNLGY-LRGDAAHPSSLFEMITRADDGATSLPQLPQ 145

Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207
            +    ++ H  +RT        P       Q+A    +S R L R  V+ETGL+F +WR
Sbjct: 146 SREAFEIA-HALLRT--------PGTDDTEAQFAKRAGISIRTLQRYFVEETGLTFTRWR 196

Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
            + ++  +L+ L +   +  +A+ +G+++ + F   F+  +G++P  Y  R
Sbjct: 197 LRARIAASLEYLKQDREIGWIANEVGFETGSGFTRAFRAQMGESPSDYRRR 247



 Score = 43.9 bits (102), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 59/142 (41%), Gaps = 9/142 (6%)

Query: 139 FDELPQQPQQQLHLPVSSHPKIRT-MVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197
           FD +   P  Q     S    I T +   +A  P +   L +WA  F      L R    
Sbjct: 393 FDIIATGPLAQPVSNTSPADSIATRLAATIAARPADPRTLDEWAQEFGTDAARLRREFRI 452

Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           ETG ++ QWR   ++  A   L  G     V+  LGY    AF   F+   G +P R+ A
Sbjct: 453 ETGTTYPQWRSLSRMTQARTQLQLGVAPGTVSRNLGYAHLPAFSRAFRTAHGISPQRFQA 512

Query: 258 R-------LTTVSPQSAKPDPR 272
           +       L +V P++A+P  R
Sbjct: 513 QSVERALWLRSV-PRAAEPSAR 533


>UniRef50_A0KFD0 Transcriptional regulator, AraC family n=1 Tax=Aeromonas hydrophila
           subsp. hydrophila ATCC 7966 RepID=A0KFD0_AERHH
          Length = 230

 Score = 66.6 bits (161), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)

Query: 49  GAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKIS 108
           G +  +    + +V  Q  + IP G+ H  +V  ++ L  ++++   +   +   T ++S
Sbjct: 31  GGVISSQAAGVLLVAGQLCL-IPAGLAHEFRVLRHSRLSLIYLDD--LDGGSELTTRQVS 87

Query: 109 PLCRELILTLANRTTTQRAEPMTRR-LIQVLFDELPQQP-QQQLHLPVSSHPKIRTMVEM 166
           PL   L   LA+      AEP  R   + VL  EL Q P      L  +   ++  ++E 
Sbjct: 88  PLLAGLFERLADM-----AEPGLRDAYLTVLAAELRQAPVAAGFMLSAALDVRLLRVLER 142

Query: 167 MAKGP-VEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTV 225
           + + P +E+G L + A     S R L RL  ++ G SFRQWRQQ+ +  A Q   +G  +
Sbjct: 143 VCRHPSIEYG-LAELAADSGASVRTLNRLFSQQLGCSFRQWRQQVVMGRARQLQQQGQPL 201

Query: 226 QKVAHTLGYDSTTAFITMFKKGLGQTPG 253
            ++A  LGY   +AF   F + L +  G
Sbjct: 202 SRIALELGYGDFSAFSHAFNRFLREPAG 229


>UniRef50_A6B1F0 Transcriptional regulator, AraC/XylS family (Fragment) n=2
           Tax=Vibrio parahaemolyticus RepID=A6B1F0_VIBPA
          Length = 154

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 1/112 (0%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
           +H H  GQ+ L   G +    E+  ++ PP  A+W+P G+ H++      E C L I+P 
Sbjct: 36  IHSHPWGQVQLISGGILEMDAEDTRFLAPPHLAIWVPAGIRHTSYNRKPIEYCSLNIDPE 95

Query: 95  AVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
                PT    +K++P+   +I     R          +RL++VL D+L +Q
Sbjct: 96  LTAHFPTKTSLIKVTPIVSAIIEDFRQRDINVAQSDEDKRLVRVLLDQLAKQ 147


>UniRef50_C7PGY2 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga
           pinensis DSM 2588 RepID=C7PGY2_CHIPD
          Length = 278

 Score = 63.2 bits (152), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 107/253 (42%), Gaps = 12/253 (4%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           P+   +A   F IH   ++   P+HQH K QL     G     + + L ++P ++  WIP
Sbjct: 22  PEIEQQATSIFVIHEKCEK-QIPLHQHSKSQLFYVDGGIAYIRLADQLLVIPSRHYCWIP 80

Query: 72  GGVEHSNQVTANA-ELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQ---RA 127
            G+ HS  +  N   L  +               + I P+   LI  +  R T Q     
Sbjct: 81  AGIPHSLTIGQNGTHLRSILFTTKGENKHAFYNDVGIYPINDLLIEMM--RYTEQWQGHI 138

Query: 128 EPMTRR--LIQVLFDELPQQPQQQL--HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183
            P   R   +Q +   LP+   + L   LP + + ++  ++  + +   +   L   +  
Sbjct: 139 LPDDERFMFLQSIKSILPKISIRHLPIALPYTENKRMLQIISYIEENISDKHTLETISKR 198

Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGL-VKGDTVQKVAHTLGYDSTTAFIT 242
           F +S+R L+R       +SF Q+ + L+++ A + +  K  ++ ++A+  GY S  +F  
Sbjct: 199 FGLSDRTLSRFFKDTLKISFLQYLKLLRMVKAFELIQQKAHSLSEIAYLTGYQSLASFSY 258

Query: 243 MFKKGLGQTPGRY 255
            F +     P  +
Sbjct: 259 TFYQVTNMRPSEF 271


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P76241 Uncharacterized HTH-type transcriptional regulat...   365   1e-99
UniRef50_Q1ZT94 Putative transcriptional regulator n=3 Tax=Photo...   282   1e-74
UniRef50_C5AN13 Helix-turn-helix-domain containing protein AraC ...   278   2e-73
UniRef50_Q216D2 Transcriptional regulator, AraC family n=7 Tax=B...   276   7e-73
UniRef50_A4JQ17 Transcriptional regulator, AraC family n=56 Tax=...   274   3e-72
UniRef50_B5RKL9 Transcriptional regulator, AraC family n=2 Tax=c...   273   5e-72
UniRef50_Q0B1C2 Transcriptional regulator, AraC family n=5 Tax=P...   273   6e-72
UniRef50_D1RWK8 Transcriptional regulatory protein n=2 Tax=Gamma...   271   2e-71
UniRef50_C5CZV0 Transcriptional regulator, AraC family n=1 Tax=V...   270   3e-71
UniRef50_A8G9B2 Transcriptional regulator, AraC family n=4 Tax=c...   268   2e-70
UniRef50_B6JB31 Transcriptional regulator, AraC-family n=5 Tax=P...   267   3e-70
UniRef50_C3KCF4 Putative transcriptional regulator n=1 Tax=Pseud...   266   7e-70
UniRef50_D2M677 Transcriptional regulator, AraC family n=1 Tax=R...   263   7e-69
UniRef50_B8J3U2 Transcriptional regulator, AraC family n=2 Tax=P...   260   3e-68
UniRef50_Q4K9E0 Transcriptional regulator, AraC family n=1 Tax=P...   260   4e-68
UniRef50_Q2SP75 AraC-type DNA-binding domain-containing protein ...   259   5e-68
UniRef50_Q2F9R4 AraC-type DNA-binding domain-containing protein ...   257   3e-67
UniRef50_Q391T4 Transcriptional regulator, AraC family n=8 Tax=P...   255   1e-66
UniRef50_A5GBQ3 Transcriptional regulator, AraC family n=2 Tax=B...   254   2e-66
UniRef50_A9FA95 Transcriptional regulator, AraC family n=2 Tax=P...   253   4e-66
UniRef50_A8I0S5 Transcriptional regulator n=1 Tax=Azorhizobium c...   253   5e-66
UniRef50_B4SJK4 Transcriptional regulator, AraC family n=4 Tax=P...   252   6e-66
UniRef50_Q0BZS2 Transcriptional regulator, AraC family n=1 Tax=H...   252   7e-66
UniRef50_Q2BLH8 Transcriptional Regulator, AraC family protein n...   251   2e-65
UniRef50_Q14GY1 Transcriptional regulator araC family protein n=...   249   5e-65
UniRef50_D1RUP3 Transcriptional regulatory protein n=2 Tax=Enter...   249   7e-65
UniRef50_A0AX10 Transcriptional regulator, AraC family n=6 Tax=B...   249   8e-65
UniRef50_Q0B9P3 Transcriptional regulator, AraC family n=14 Tax=...   249   1e-64
UniRef50_B0UH11 Transcriptional regulator, AraC family n=3 Tax=R...   249   1e-64
UniRef50_Q11DK3 Transcriptional regulator, AraC family n=1 Tax=C...   248   1e-64
UniRef50_A6W3J4 Helix-turn-helix-domain containing protein AraC ...   248   1e-64
UniRef50_A6W2J3 Transcriptional regulator, AraC family n=1 Tax=M...   248   1e-64
UniRef50_A9HXG4 Transcriptional regulator, AraC family n=3 Tax=P...   248   2e-64
UniRef50_Q4K821 Transcriptional regulator, AraC family n=22 Tax=...   248   2e-64
UniRef50_B0VLM5 Putative transcriptional regulator (AraC family)...   247   2e-64
UniRef50_Q39GD4 Transcriptional regulator, AraC family n=7 Tax=B...   247   2e-64
UniRef50_B4SSQ8 Transcriptional regulator, AraC family n=3 Tax=S...   247   4e-64
UniRef50_A1K8N6 Putative AraC-family transcriptional regulator n...   244   2e-63
UniRef50_Q8L1B2 Transcriptional factor PhcT (Fragment) n=1 Tax=C...   244   3e-63
UniRef50_D1SXH7 Transcriptional regulator, AraC family n=1 Tax=A...   244   3e-63
UniRef50_D0J513 Pyridoxamine 5'-phosphate oxidase-related protei...   243   5e-63
UniRef50_D0B292 Transcriptional regulator n=40 Tax=Rhizobiales R...   243   6e-63
UniRef50_Q47EU9 Transcriptional regulator, AraC family n=4 Tax=B...   242   6e-63
UniRef50_Q4ZYQ3 Helix-turn-helix, AraC type:Arac protein, arabin...   242   9e-63
UniRef50_Q7W072 Probable transcriptional regulator n=3 Tax=Borde...   242   1e-62
UniRef50_C1DH76 Transcriptional regulator, AraC-family n=3 Tax=P...   242   1e-62
UniRef50_Q15UL1 Transcriptional regulator, AraC family n=3 Tax=A...   241   1e-62
UniRef50_Q2RRF5 Transcriptional regulator, AraC family n=2 Tax=A...   241   2e-62
UniRef50_A4WDQ0 Transcriptional regulator, AraC family n=18 Tax=...   241   2e-62
UniRef50_C3K8M6 Putative AraC-family regulatory protein n=1 Tax=...   241   3e-62
UniRef50_A6WQB9 Helix-turn-helix-domain containing protein AraC ...   240   4e-62
UniRef50_Q2SEK4 AraC-type DNA-binding domain-containing protein ...   239   7e-62
UniRef50_Q221Z0 Transcriptional regulator, AraC family n=9 Tax=P...   239   7e-62
UniRef50_Q4K6D5 Transcriptional regulator, AraC family n=8 Tax=P...   239   9e-62
UniRef50_Q47Y50 Transcriptional regulator, araC family n=1 Tax=C...   239   1e-61
UniRef50_B3RAF2 Putative Transcriptional Regulator, AraC family ...   238   1e-61
UniRef50_A7K1S8 Transcriptional regulator AraC family protein n=...   238   2e-61
UniRef50_B3QB90 Transcriptional regulator, AraC family n=3 Tax=A...   237   2e-61
UniRef50_Q0KFJ5 Transcriptional regulator, AraC-family n=11 Tax=...   237   4e-61
UniRef50_B5WKD5 Transcriptional regulator, AraC family n=1 Tax=B...   236   5e-61
UniRef50_B0RW44 Transcriptional regulator, AraC family n=6 Tax=X...   236   5e-61
UniRef50_A5FCF5 Transcriptional regulator, AraC family n=1 Tax=F...   236   5e-61
UniRef50_Q13ID0 Transcriptional regulator, AraC family n=1 Tax=B...   236   9e-61
UniRef50_A3QGH9 Transcriptional regulator, AraC family n=1 Tax=S...   236   9e-61
UniRef50_A3Y5B2 Probable transcriptional regulator n=1 Tax=Marin...   235   1e-60
UniRef50_B1KGB7 Transcriptional regulator, AraC family n=2 Tax=S...   235   1e-60
UniRef50_B4EJY3 AraC family regulatory protein n=10 Tax=Burkhold...   234   2e-60
UniRef50_A0NPK3 Probable transcriptional regulator protein, AraC...   234   3e-60
UniRef50_D1P6X5 Transcriptional regulator, AraC family n=1 Tax=P...   232   8e-60
UniRef50_Q39NN6 Transcriptional regulator, AraC family n=9 Tax=B...   232   1e-59
UniRef50_A3D530 Transcriptional regulator, AraC family n=12 Tax=...   232   1e-59
UniRef50_B4SQ42 Transcriptional regulator, AraC family n=5 Tax=X...   231   2e-59
UniRef50_Q2BIT2 Transcriptional regulator, AraC family protein n...   231   2e-59
UniRef50_Q1ZB18 Transcriptional Regulator, AraC family protein n...   231   2e-59
UniRef50_C6RQZ7 Transcriptional regulator, AraC family n=1 Tax=A...   231   3e-59
UniRef50_B1TGD6 Transcriptional regulator, AraC family n=7 Tax=P...   231   3e-59
UniRef50_B9R0N9 Transcriptional regulator, AraC family protein n...   230   3e-59
UniRef50_A5V470 Transcriptional regulator, AraC family n=1 Tax=S...   230   4e-59
UniRef50_A9ISK4 Transcriptional regulator, AraC family n=3 Tax=P...   230   4e-59
UniRef50_Q11FA3 Transcriptional regulator, AraC family n=1 Tax=C...   230   4e-59
UniRef50_Q2K0F2 Probable transcriptional regulator protein, AraC...   229   6e-59
UniRef50_A3RTS8 Transcriptional regulator, AraC family n=4 Tax=R...   229   8e-59
UniRef50_B1JZJ0 Transcriptional regulator, AraC family n=2 Tax=B...   228   1e-58
UniRef50_Q3JQZ2 Transcriptional regulator, AraC family n=59 Tax=...   228   1e-58
UniRef50_A9IA98 Transcriptional regulator, AraC family n=1 Tax=B...   228   1e-58
UniRef50_A1TK09 Transcriptional regulator, AraC family n=4 Tax=P...   228   2e-58
UniRef50_B7GXZ6 Bacterial regulatory helix-turn-helix protein, A...   228   2e-58
UniRef50_C4XL68 AraC family transcriptional regulator n=2 Tax=De...   227   3e-58
UniRef50_B7GW45 Bacterial regulatory helix-turn-helix protein, A...   227   3e-58
UniRef50_B6ELX6 HTH-type transcriptional regulator, AraC family ...   227   4e-58
UniRef50_B2I1A9 AraC-type DNA-binding domain-containing protein ...   226   5e-58
UniRef50_B5EUU3 Transcriptional regulator, AraC/XylS family n=29...   226   5e-58
UniRef50_Q7MFB7 AraC-type DNA-binding domain-containing protein ...   226   8e-58
UniRef50_Q7D2T6 Transcriptional regulator, AraC family n=7 Tax=P...   226   9e-58
UniRef50_UPI00019092C6 AraC family transcriptional regulator n=1...   225   1e-57
UniRef50_C9PF84 Transcriptional regulator AraC family n=1 Tax=Vi...   225   1e-57
UniRef50_D0J7G0 Transcriptional regulator, AraC family n=11 Tax=...   225   1e-57
UniRef50_B7UVC2 Probable transcriptional regulator n=6 Tax=Pseud...   225   2e-57
UniRef50_B1JGH9 Transcriptional regulator, AraC family n=26 Tax=...   224   2e-57
UniRef50_A6V354 Transcriptional regulator, AraC family n=3 Tax=P...   224   2e-57
UniRef50_Q13M62 Transcriptional regulator, AraC family n=4 Tax=B...   224   3e-57
UniRef50_C7MAZ5 Transcriptional regulator containing an amidase ...   224   3e-57
UniRef50_B0T088 Transcriptional regulator, AraC family n=1 Tax=C...   224   3e-57
UniRef50_C0YIN0 AraC/XylS family transcriptional regulator n=1 T...   223   6e-57
UniRef50_Q5E435 Transcriptional regulator, AraC family n=3 Tax=V...   223   6e-57
UniRef50_A6V4X5 Probable transcriptional regulator n=7 Tax=Pseud...   223   6e-57
UniRef50_C1MBM6 Transcriptional regulator n=2 Tax=Citrobacter Re...   222   8e-57
UniRef50_C8Q2C9 Transcriptional regulator, AraC family n=1 Tax=P...   222   1e-56
UniRef50_D2B3A1 AraC family transcriptional regulator n=5 Tax=Ac...   222   1e-56
UniRef50_A4CF02 Transcriptional regulator, araC family protein n...   221   2e-56
UniRef50_Q28MP8 Transcriptional regulator, AraC family n=1 Tax=J...   221   2e-56
UniRef50_A5F0T8 Transcriptional regulator, AraC/XylS family n=40...   221   2e-56
UniRef50_A1BBK0 Transcriptional regulator, AraC family n=2 Tax=A...   221   2e-56
UniRef50_Q0TI30 Transcriptional regulator, AraC family n=14 Tax=...   221   3e-56
UniRef50_C5CUS1 Transcriptional regulator, AraC family n=1 Tax=V...   220   4e-56
UniRef50_C4WMA6 AraC family transcriptional regulator n=1 Tax=Oc...   220   4e-56
UniRef50_C9NXQ1 Transcriptional regulator AraC family n=1 Tax=Vi...   220   4e-56
UniRef50_B9JII8 Transcriptional regulator protein n=1 Tax=Agroba...   220   4e-56
UniRef50_Q4KJ22 Transcriptional regulator, AraC family n=7 Tax=P...   220   5e-56
UniRef50_C3JKZ1 Transcriptional regulator, AraC family n=2 Tax=R...   219   7e-56
UniRef50_D1X8C9 Transcriptional regulator, AraC family n=2 Tax=S...   219   7e-56
UniRef50_Q01YV9 Transcriptional regulator, AraC family n=1 Tax=C...   219   8e-56
UniRef50_A8GAI3 Transcriptional regulator, AraC family n=2 Tax=S...   219   1e-55
UniRef50_Q47UH5 Substrate-binding transcriptional regulator, Ara...   219   1e-55
UniRef50_C7JHN7 Transcriptional regulator AraC n=8 Tax=Acetobact...   219   1e-55
UniRef50_Q2KXY1 AraC-family transcriptional regulator n=5 Tax=Pr...   218   1e-55
UniRef50_A8T3D4 AraC-type DNA-binding domain-containing protein ...   217   3e-55
UniRef50_A9ILC9 Transcriptional regulator, AraC family n=3 Tax=B...   217   3e-55
UniRef50_C8QEY4 Transcriptional regulator, AraC family n=1 Tax=P...   217   3e-55
UniRef50_Q2BQ21 Transcriptional regulator, AraC family protein n...   217   3e-55
UniRef50_D1XHM7 Transcriptional regulator, AraC family n=1 Tax=S...   217   4e-55
UniRef50_Q7D3B7 Transcriptional regulator. AraC family n=2 Tax=A...   216   5e-55
UniRef50_A8GH45 Transcriptional regulator, AraC family n=18 Tax=...   216   5e-55
UniRef50_B3Q9E6 Transcriptional regulator, AraC family n=2 Tax=R...   216   7e-55
UniRef50_Q2L001 AraC-family transcriptional regulator n=4 Tax=Bo...   216   8e-55
UniRef50_C6CCZ8 Transcriptional regulator, AraC family n=3 Tax=D...   216   8e-55
UniRef50_B2UKA3 Transcriptional regulator, AraC family n=8 Tax=B...   215   1e-54
UniRef50_Q7VTI7 AraC-family regulatory protein n=3 Tax=Bordetell...   214   2e-54
UniRef50_A8AKK6 Putative uncharacterized protein n=1 Tax=Citroba...   214   2e-54
UniRef50_A0KEB0 Transcriptional regulator, AraC/XylS family n=25...   214   3e-54
UniRef50_C6DFV4 Transcriptional regulator, AraC family n=1 Tax=P...   213   4e-54
UniRef50_A1VPE7 Transcriptional regulator, AraC family n=2 Tax=C...   213   5e-54
UniRef50_UPI0001B55F3C AraC family transcriptional regulator n=3...   212   8e-54
UniRef50_A6VY36 Helix-turn-helix-domain containing protein AraC ...   212   1e-53
UniRef50_A9BNM6 Transcriptional regulator, AraC family n=3 Tax=P...   211   1e-53
UniRef50_C8QCP4 Transcriptional regulator, AraC family n=1 Tax=P...   211   2e-53
UniRef50_B1LVX0 Transcriptional regulator, AraC family n=3 Tax=R...   211   2e-53
UniRef50_Q7NRZ6 Probable transcriptional regulator AraC family n...   211   2e-53
UniRef50_Q7CRR0 Transcriptional regulator, AraC family n=4 Tax=R...   211   3e-53
UniRef50_Q13VV8 Transcriptional regulator, AraC family n=2 Tax=P...   211   3e-53
UniRef50_A8G994 Transcriptional regulator, AraC family n=12 Tax=...   209   7e-53
UniRef50_B4SMW0 Transcriptional regulator, AraC family n=3 Tax=S...   209   8e-53
UniRef50_B4EHM1 AraC family regulatory protein n=5 Tax=Burkholde...   209   8e-53
UniRef50_D1VDY4 Transcriptional regulator, AraC family n=1 Tax=F...   208   1e-52
UniRef50_C1A6S8 AraC family transcriptional regulator n=1 Tax=Ge...   208   1e-52
UniRef50_D2BBL9 Transcriptional regulator, AraC-family n=18 Tax=...   207   3e-52
UniRef50_Q8EHW8 Transcriptional regulator, AraC/XylS family n=3 ...   207   3e-52
UniRef50_C9PF82 Substrate-binding transcriptional regulator AraC...   207   3e-52
UniRef50_C7I316 Transcriptional regulator, AraC family n=1 Tax=T...   207   4e-52
UniRef50_Q0B8S9 Transcriptional regulator, AraC family n=1 Tax=B...   206   6e-52
UniRef50_D1BGA1 DNA-binding domain-containing protein, AraC-type...   206   6e-52
UniRef50_A0KTL0 Transcriptional regulator, AraC family n=25 Tax=...   206   7e-52
UniRef50_Q3JG82 AraC family regulatory protein n=50 Tax=Proteoba...   206   7e-52
UniRef50_A5U9G2 AraC-family transcriptional regulator n=12 Tax=M...   206   8e-52
UniRef50_A8L2S5 Transcriptional regulator, AraC family n=3 Tax=A...   205   1e-51
UniRef50_Q5FU43 Transcriptional regulator, AraC family n=1 Tax=G...   204   2e-51
UniRef50_B5XX95 Transcriptional regulator, AraC family n=7 Tax=E...   204   2e-51
UniRef50_Q5LMG8 Transcriptional regulator, AraC family n=1 Tax=R...   204   4e-51
UniRef50_D0L975 Helix-turn-helix-domain containing protein AraC ...   202   7e-51
UniRef50_B0TZR0 Transcriptional regulator, AraC family n=1 Tax=F...   202   8e-51
UniRef50_A0R133 Transcriptional regulator, AraC family protein n...   202   9e-51
UniRef50_A0KHN7 Transcriptional regulator, AraC family n=1 Tax=A...   202   1e-50
UniRef50_C4WPU9 AraC family transcriptional regulator n=1 Tax=Oc...   202   1e-50
UniRef50_B4SKF1 Transcriptional regulator, AraC family n=2 Tax=S...   201   2e-50
UniRef50_D1UHS6 Transcriptional regulator, AraC family n=1 Tax=B...   200   3e-50
UniRef50_Q2NTH9 Putative transcriptional regulator n=1 Tax=Sodal...   200   3e-50
UniRef50_A9BQK3 Transcriptional regulator, AraC family n=8 Tax=B...   200   6e-50
UniRef50_C3X452 Putative uncharacterized protein n=2 Tax=Oxaloba...   199   7e-50
UniRef50_C8QA12 Transcriptional regulator, AraC family n=1 Tax=P...   199   8e-50
UniRef50_A5FK83 Transcriptional regulator, AraC family n=3 Tax=B...   199   1e-49
UniRef50_D1WVC3 Transcriptional regulator, AraC family n=3 Tax=A...   198   1e-49
UniRef50_B5GYF3 AraC-family transcriptional regulator n=4 Tax=Ac...   198   1e-49
UniRef50_D1XRU9 Transcriptional regulator, AraC family n=4 Tax=A...   197   2e-49
UniRef50_B9TN09 HTH-type transcriptional repressor of iron prote...   197   3e-49
UniRef50_B4SPX2 AraC protein arabinose-binding/dimerisation n=2 ...   197   4e-49
UniRef50_D1BCS3 DNA-binding domain-containing protein, AraC-type...   196   7e-49
UniRef50_Q13JN4 Transcriptional regulator, AraC family n=13 Tax=...   195   1e-48
UniRef50_D1BHF8 DNA-binding domain-containing protein, AraC-type...   195   1e-48
UniRef50_Q28KW4 Transcriptional regulator, AraC family n=1 Tax=J...   195   1e-48
UniRef50_C3JM12 Transcriptional regulator, AraC family n=2 Tax=R...   194   2e-48
UniRef50_A6SYJ9 Transcriptional regulator, AraC family n=2 Tax=O...   194   2e-48
UniRef50_Q1ZV01 Transcriptional regulator, AraC family protein n...   194   2e-48
UniRef50_C3JND7 Transcriptional regulator, AraC family n=2 Tax=R...   194   4e-48
UniRef50_D0J7V7 Transcriptional regulator, AraC family n=6 Tax=P...   193   5e-48
UniRef50_Q212B5 Transcriptional regulator, AraC family n=1 Tax=R...   193   6e-48
UniRef50_A8L421 Transcriptional regulator, AraC family n=12 Tax=...   192   8e-48
UniRef50_D1XNW1 Transcriptional regulator, AraC family n=1 Tax=S...   192   8e-48
UniRef50_C9PG34 Transcriptional regulator AraC family n=1 Tax=Vi...   191   3e-47
UniRef50_C3JWU5 Transcriptional regulator, AraC family n=4 Tax=R...   191   3e-47
UniRef50_B5I4G1 AraC-family transcriptional regulator n=1 Tax=St...   190   4e-47
UniRef50_B9K583 Transcriptional regulator n=3 Tax=Alphaproteobac...   189   1e-46
UniRef50_D1VIF5 Transcriptional regulator, AraC family n=1 Tax=F...   188   2e-46
UniRef50_C0YKZ5 AraC family transcriptional regulator n=1 Tax=Ch...   188   2e-46
UniRef50_A8U313 Helix-turn-helix, AraC type:Arac protein, arabin...   187   5e-46
UniRef50_C3JLV5 AraC-family transcriptional regulator n=2 Tax=Rh...   186   8e-46
UniRef50_C0YJ90 AraC family transcriptional regulator n=1 Tax=Ch...   185   1e-45
UniRef50_C3JVD6 Transcriptional regulator, AraC family n=3 Tax=R...   185   2e-45
UniRef50_A5VF29 Transcriptional regulator, AraC family n=2 Tax=A...   185   2e-45
UniRef50_D1BBW6 DNA-binding domain-containing protein, AraC-type...   184   4e-45
UniRef50_Q84HW2 Transcription regulator n=1 Tax=Rhizobium sp. TA...   182   8e-45
UniRef50_UPI000050FCF9 AraC family transcriptional regulator n=1...   182   8e-45
UniRef50_Q7NRR7 Probable transcriptional regulator n=1 Tax=Chrom...   182   1e-44
UniRef50_Q091X7 Helix-turn-helix, AraC type n=1 Tax=Stigmatella ...   182   2e-44
UniRef50_D0LZ72 Transcriptional regulator, AraC family n=1 Tax=H...   181   2e-44
UniRef50_A8LCQ9 Transcriptional regulator, AraC family n=1 Tax=F...   181   2e-44
UniRef50_C2FVA1 AraC family transcriptional regulator n=1 Tax=Sp...   181   2e-44
UniRef50_B5CUH6 Putative uncharacterized protein n=1 Tax=Bactero...   181   2e-44
UniRef50_A5EPW3 Transcriptional regulator, AraC family n=3 Tax=B...   180   3e-44
UniRef50_C7PA31 Transcriptional regulator, AraC family n=1 Tax=C...   180   5e-44
UniRef50_UPI000197B237 hypothetical protein BACCOPRO_02201 n=1 T...   179   6e-44
UniRef50_Q2S7S2 AraC-type DNA-binding domain-containing protein ...   179   7e-44
UniRef50_D1BFL9 DNA-binding domain-containing protein, AraC-type...   179   8e-44
UniRef50_B7H290 Bacterial regulatory helix-turn-helix protein, A...   179   1e-43
UniRef50_A6GAR4 Putative transcriptional regulator n=1 Tax=Plesi...   177   3e-43
UniRef50_C5PU57 AraC family transcriptional regulator n=1 Tax=Sp...   176   8e-43
UniRef50_Q28SV1 Transcriptional regulator, AraC family n=1 Tax=J...   175   1e-42
UniRef50_D0KLM1 Transcriptional regulator, AraC family n=2 Tax=E...   175   2e-42
UniRef50_A6ED21 Transcriptional regulator, AraC family protein n...   174   4e-42
UniRef50_C7PGY2 Transcriptional regulator, AraC family n=1 Tax=C...   173   5e-42
UniRef50_D1WSG5 Transcriptional regulator, AraC family n=3 Tax=S...   171   2e-41
UniRef50_B5H317 AraC-type DNA-binding domain-containing protein ...   171   2e-41
UniRef50_A3XQJ9 Probable transcription regulator protein n=1 Tax...   170   5e-41
UniRef50_D1BHB2 Transcriptional regulator, AraC family n=10 Tax=...   169   8e-41
UniRef50_A9GKK5 Transcriptional regulator, AraC family n=1 Tax=S...   169   9e-41
UniRef50_C6C927 Transcriptional regulator, AraC family n=2 Tax=D...   167   3e-40
UniRef50_C7R5F1 Transcriptional regulator, AraC family n=1 Tax=J...   167   4e-40
UniRef50_C5PVX4 AraC family transcriptional regulator n=2 Tax=Sp...   167   5e-40
UniRef50_C0YKT6 AraC family transcriptional regulator n=3 Tax=Ba...   162   9e-39
UniRef50_Q1QZK4 Transcriptional regulator, AraC family n=1 Tax=C...   161   2e-38
UniRef50_B3JKA4 Putative uncharacterized protein n=1 Tax=Bactero...   159   1e-37
UniRef50_A5KTY3 Transcriptional regulator, araC family protein n...   158   2e-37
UniRef50_Q5WI14 AraC/XylS family transcriptional regulator n=1 T...   155   2e-36
UniRef50_Q1LNA3 Transcriptional regulator, AraC family n=1 Tax=C...   155   2e-36
UniRef50_C3JMH4 Transcriptional regulator, AraC family n=2 Tax=R...   152   2e-35
UniRef50_A0KFD0 Transcriptional regulator, AraC family n=1 Tax=A...   151   3e-35
UniRef50_Q3HKF1 Transcriptional regulator, AraC family n=2 Tax=R...   150   5e-35
UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacte...   150   5e-35
UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=D...   147   3e-34

Sequences not found previously or not previously below threshold:

UniRef50_C0YRY4 AraC family transcriptional regulator n=1 Tax=Ch...   194   4e-48
UniRef50_UPI000197B111 hypothetical protein BACCOPRO_01534 n=1 T...   151   2e-35

>UniRef50_P76241 Uncharacterized HTH-type transcriptional regulator yeaM n=55
           Tax=Enterobacteriaceae RepID=YEAM_ECOLI
          Length = 273

 Score =  365 bits (936), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 273/273 (100%), Positives = 273/273 (100%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW
Sbjct: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120
           MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN
Sbjct: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120

Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180
           RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW
Sbjct: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180

Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240
           AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF
Sbjct: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240

Query: 241 ITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ 273
           ITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ
Sbjct: 241 ITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ 273


>UniRef50_Q1ZT94 Putative transcriptional regulator n=3 Tax=Photobacterium
           RepID=Q1ZT94_PHOAS
          Length = 266

 Score =  282 bits (721), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 107/262 (40%), Positives = 154/262 (58%), Gaps = 4/262 (1%)

Query: 1   MMHRLNLN----GYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVE 56
           M   + LN     ++ D + + AVA        +   P H HRKGQL+L L G + C + 
Sbjct: 1   MTKNITLNKTIPSFDSDSYSQKAVAMRFSRSDVDEELPFHTHRKGQLVLPLSGCVRCKIA 60

Query: 57  NALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELIL 116
           NA+WMVP   AVWIP  V HS  ++ + ++C LFIEP  + +P   CTL +SPL RELI+
Sbjct: 61  NAIWMVPTNCAVWIPSQVPHSLTISDDIDICNLFIEPDVIGLPEKACTLSVSPLLRELIV 120

Query: 117 TLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGA 176
            LA        E  T RL+ VL  EL   P +Q   P+   P+++ +   +   P +   
Sbjct: 121 KLAELDQFYEDEGNTARLVDVLIYELSTMPSEQFDFPIPEEPRLQKIALALIANPSDRST 180

Query: 177 LGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDS 236
           +G+WA  +AMSER LARL+ +E GL+F  WR QL +++ALQ L  G+ VQ+++  LGY+S
Sbjct: 181 VGEWASKYAMSERTLARLVKQELGLTFGNWRGQLHIVIALQKLSSGEPVQRISEDLGYES 240

Query: 237 TTAFITMFKKGLGQTPGRYIAR 258
            +AFIT FK+ LG+ P +YI +
Sbjct: 241 VSAFITFFKRTLGRPPKQYIKK 262


>UniRef50_C5AN13 Helix-turn-helix-domain containing protein AraC type n=15
           Tax=cellular organisms RepID=C5AN13_BURGB
          Length = 283

 Score =  278 bits (710), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 101/258 (39%), Positives = 154/258 (59%), Gaps = 1/258 (0%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
           + D      VA      T +     H+HR+ QL+ ++ G + C +E+ +W+VPPQ AVWI
Sbjct: 14  DVDNVPRPVVALSAMTVTKDWEHAKHRHRRAQLLYSVRGILNCEIEDGVWIVPPQCAVWI 73

Query: 71  PGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129
           PG + H+ + +   E   LF+EP A   +P +CCT+ +SPL REL+L +A          
Sbjct: 74  PGDLPHAARGSGETECHCLFVEPDAAPDLPKSCCTISVSPLLRELLLKVACFPELYPLGS 133

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
              RLI VL DEL   P + LHLP+   P++R + EM+   P +  + G WA    MSER
Sbjct: 134 REDRLIAVLLDELAMAPVEDLHLPMPRDPRLRRLAEMLLTDPTDKTSKGDWATRIGMSER 193

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
           +++RL++ E G+SF +W +QL +I+ALQ L KG++VQ VA  LGY++ + F+TMF+K +G
Sbjct: 194 SMSRLLMHEIGMSFGRWCRQLHVILALQRLTKGESVQTVALELGYENASGFVTMFRKAVG 253

Query: 250 QTPGRYIARLTTVSPQSA 267
           + P RY+A     +  +A
Sbjct: 254 KPPARYLADRMVNARSAA 271


>UniRef50_Q216D2 Transcriptional regulator, AraC family n=7 Tax=Bacteria
           RepID=Q216D2_RHOPB
          Length = 280

 Score =  276 bits (705), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 109/266 (40%), Positives = 165/266 (62%), Gaps = 2/266 (0%)

Query: 9   GYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAV 68
             +PD      VAF +      L    H+HRK QL+L+L G +TC  ++ LW+VPPQ+A+
Sbjct: 13  WSDPDDIPRPVVAFGVTLAGPGLELAPHRHRKAQLLLSLRGVLTCEAQSGLWLVPPQHAI 72

Query: 69  WIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRA 127
           WIPGG  H+ + T   E   +F+EP+  + MP +CCT+ ++PL REL++  A        
Sbjct: 73  WIPGGALHAIRATGTIEGYDIFVEPALTLGMPASCCTMSVTPLLRELLVRAAGFPLLYPE 132

Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187
                 L  +L DE+     Q+L+LP+ +  ++R +VE+M   P + G +  WA    +S
Sbjct: 133 GGAESHLFTLLLDEVATASVQRLYLPMPADVRLRRIVELMMADPTDRGTMASWAKRAGLS 192

Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247
           ER LARL+ +ETG+SF +WRQQL +++ALQ + +G  +Q++A  LGY+S  +F+TMF+K 
Sbjct: 193 ERTLARLLARETGMSFGRWRQQLTIMLALQRMAEGAPIQRLAVELGYESAASFVTMFRKT 252

Query: 248 LGQTPGRYIARLTTVSPQSAKPDPRQ 273
           LG +PGRY+ARL   SP +A  DP+Q
Sbjct: 253 LGSSPGRYMARLRG-SPAAADQDPKQ 277


>UniRef50_A4JQ17 Transcriptional regulator, AraC family n=56 Tax=Proteobacteria
           RepID=A4JQ17_BURVG
          Length = 325

 Score =  274 bits (700), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 132/257 (51%), Positives = 170/257 (66%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
           +PD     AVA C+H        PVH+H+KGQL+LALHGA+TC V  A W+VPPQ  VWI
Sbjct: 46  DPDAIDRPAVAMCMHVDEHAPEIPVHKHQKGQLVLALHGAVTCRVAGAFWIVPPQCGVWI 105

Query: 71  PGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130
           PG + HSN  T NA LC+LF EP  V +PT CCTL ISP+ RE+I+ LA           
Sbjct: 106 PGEMPHSNHATPNARLCYLFAEPGVVDLPTECCTLSISPMLREMIMHLAGAPLDYEQGGH 165

Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190
           T RL +VL  EL   P ++L+LPV+ HP+IR M + +   P +   + QWA   AMSER+
Sbjct: 166 TDRLARVLLHELTLMPVERLYLPVTDHPRIRQMADALNANPGDRSTVSQWAKRLAMSERS 225

Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250
           LARL+V ETGL+F +WRQQLQL++A++ L  G +VQ+V+  LGY+S TAFITMFKK LG 
Sbjct: 226 LARLVVSETGLTFGRWRQQLQLLVAVRELAGGASVQRVSDELGYESVTAFITMFKKALGH 285

Query: 251 TPGRYIARLTTVSPQSA 267
           +PGRY A L     ++ 
Sbjct: 286 SPGRYFAALARTQSEAG 302


>UniRef50_B5RKL9 Transcriptional regulator, AraC family n=2 Tax=cellular organisms
           RepID=B5RKL9_KLEP3
          Length = 264

 Score =  273 bits (698), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 124/254 (48%), Positives = 169/254 (66%)

Query: 6   NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65
           +   +  D   +AA+A  + +  +      H HRKGQLIL++ GA+ C V++ALW+VPP 
Sbjct: 10  SPEEFNADDFSQAAIALHVSSSGEYAGQRPHAHRKGQLILSMRGAVRCEVDDALWLVPPG 69

Query: 66  YAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQ 125
           +AVW+PG + H  ++T NA+ CFLFIEP A  MP  CCT+ ++PL REL+L LA +  T 
Sbjct: 70  HAVWVPGEIPHRCRITKNADTCFLFIEPGAAAMPEICCTIAVTPLVRELVLYLAEQEHTY 129

Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185
             +  T RL  VL + +P  P + LHLPVS HPKIR M E +   P +   L QWA   A
Sbjct: 130 SPDSKTARLAAVLLEHIPDVPVEALHLPVSDHPKIRIMAEALFNEPDDRRTLKQWAAHLA 189

Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245
           +SER+LARLI + TG+SF +WRQQL L++AL  L +G  VQ+VA TLGYDS +AFITMF+
Sbjct: 190 ISERSLARLIKEATGMSFGRWRQQLHLMIALSHLSEGQPVQRVAGTLGYDSVSAFITMFR 249

Query: 246 KGLGQTPGRYIARL 259
           K LG++P +Y + L
Sbjct: 250 KALGKSPTQYFSSL 263


>UniRef50_Q0B1C2 Transcriptional regulator, AraC family n=5 Tax=Proteobacteria
           RepID=Q0B1C2_BURCM
          Length = 273

 Score =  273 bits (697), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 98/262 (37%), Positives = 152/262 (58%)

Query: 4   RLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63
           ++N   ++PD      ++  +     E   P+H HRKGQ+++AL G++ C   +  W+VP
Sbjct: 12  KINYQPFDPDSVDLPVISVLLETSGKEDELPMHVHRKGQMVVALSGSVMCRSPSGWWIVP 71

Query: 64  PQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTT 123
           P  AVWIPGG+ HSN  +  A+L  +FI P    +PT C +  I+PL RELI +LA    
Sbjct: 72  PNGAVWIPGGIPHSNHASDFAKLYVIFIPPDEAGLPTDCRSFTITPLIRELIRSLARFPP 131

Query: 124 TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183
               +    RL +VL D+L       + LP+S +P+++ +   +   P +   + +W   
Sbjct: 132 DYPKDGPVGRLARVLLDQLALLAPDDVFLPISDNPRLQQIASALLDNPADRSTIAEWGRR 191

Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITM 243
           +AMSER LARL+  ETG++F +WR++L +I+ALQ L  G +V  VA  LGY+   +FITM
Sbjct: 192 YAMSERTLARLVRSETGMTFGRWRERLHIIIALQRLSAGASVHAVALELGYEGPNSFITM 251

Query: 244 FKKGLGQTPGRYIARLTTVSPQ 265
           FKK +GQ+PG++       S +
Sbjct: 252 FKKTMGQSPGKFRVDNKEASSR 273


>UniRef50_D1RWK8 Transcriptional regulatory protein n=2 Tax=Gammaproteobacteria
           RepID=D1RWK8_SEROD
          Length = 284

 Score =  271 bits (693), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 105/269 (39%), Positives = 153/269 (56%), Gaps = 1/269 (0%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           +M  +    ++ D+   A  A      + +     H+HRK QLI  + G I C  EN LW
Sbjct: 12  LMPVITEPRFDIDQVPRAIFAVQGSTISSDWEMAPHRHRKAQLIYTVRGMIRCEAENGLW 71

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA 119
           +VPPQ A+W+PG V H+ Q   + E   LF++  A+  +PT CCTL +SPL REL+L  +
Sbjct: 72  LVPPQCALWMPGNVLHNAQGAGDTECYCLFVDQDAIAGLPTHCCTLAVSPLLRELLLQAS 131

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
                   +    RL  VL D++   P + LHLPVS   +IR + E +   P +   L Q
Sbjct: 132 GFDPLYDEQGPEGRLTTVLLDQVVNAPIENLHLPVSQDARIRQLTERLLANPADKATLNQ 191

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
           WA    MSER+L R + ++ G+SF  WR+QL +++ALQ L KGD+VQKVA  LGY+S + 
Sbjct: 192 WAQRIGMSERSLNRTLQQQMGMSFGHWRRQLHVMLALQRLTKGDSVQKVALDLGYESASG 251

Query: 240 FITMFKKGLGQTPGRYIARLTTVSPQSAK 268
           F+TMF+K +G+ P RY+A  +     +  
Sbjct: 252 FVTMFRKAVGKPPARYLAERSAAGQAAGS 280


>UniRef50_C5CZV0 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus
           S110 RepID=C5CZV0_VARPS
          Length = 292

 Score =  270 bits (691), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 121/259 (46%), Positives = 159/259 (61%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
            HR     +E D+      A  I         P HQH +GQL + L G +TC V  ALWM
Sbjct: 34  THRQGAWTFEFDKMEARVAAVRIRTEALAEGLPAHQHPQGQLAMVLRGTVTCEVPGALWM 93

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANR 121
            P    +WIPGGV HS +V+A   +CFLF+E +A  MP TCC+L +SPL RELIL LA  
Sbjct: 94  APLHGGLWIPGGVPHSLRVSAEGNVCFLFVEDAAAAMPQTCCSLSVSPLLRELILYLAAL 153

Query: 122 TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWA 181
               + EP   RL  VL D+L + P + +HLPVS  P++R +++ + + P +     QWA
Sbjct: 154 PEGAQREPQALRLHAVLLDQLARMPTEAMHLPVSEEPRLRRLIDALMRDPADRTTAAQWA 213

Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241
              AMSER L RL+  ETG+SF +W Q+L+LI+ALQ L  G +VQ+VAH LGYDS +AFI
Sbjct: 214 SRLAMSERTLTRLVQLETGMSFGRWSQRLRLIVALQWLTSGLSVQQVAHGLGYDSVSAFI 273

Query: 242 TMFKKGLGQTPGRYIARLT 260
            MF+K +GQ P RY+AR  
Sbjct: 274 AMFRKAMGQPPARYLARRR 292


>UniRef50_A8G9B2 Transcriptional regulator, AraC family n=4 Tax=cellular organisms
           RepID=A8G9B2_SERP5
          Length = 284

 Score =  268 bits (685), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 104/269 (38%), Positives = 153/269 (56%), Gaps = 1/269 (0%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           +M  +    ++ D+   A  A        +     H+HRK QLI  + G I C VEN LW
Sbjct: 12  LMTFITEPRFDIDQVPRAIFAVQGSTIDKDWEITHHRHRKAQLIYTVRGMIRCEVENGLW 71

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA 119
           +VPPQ A+W+P  V H+ Q  + +E   LF++  A+  +PT CCTL +SPL REL+   +
Sbjct: 72  LVPPQCALWMPSNVLHNAQGASASECYCLFVDQDAIAGLPTHCCTLAVSPLLRELLFQAS 131

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
                   +    RL  VL D+L + P + LHLPVS+  +IR + E +   P +   LGQ
Sbjct: 132 AFEQLYDQQGPEGRLAGVLLDQLVKAPVENLHLPVSNDARIRQLTERLLANPADKATLGQ 191

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
           WA    MSER+L R + ++ G+SF  WR+QL +++ALQ L +GD+VQ+VA  LGY+S + 
Sbjct: 192 WAQRIGMSERSLNRTLQQQMGMSFGHWRRQLHVVLALQRLTQGDSVQRVALDLGYESASG 251

Query: 240 FITMFKKGLGQTPGRYIARLTTVSPQSAK 268
           F+TMF+K +G+ P RY+A           
Sbjct: 252 FVTMFRKAVGKPPARYLAEKNAADRAQGA 280


>UniRef50_B6JB31 Transcriptional regulator, AraC-family n=5 Tax=Proteobacteria
           RepID=B6JB31_OLICO
          Length = 300

 Score =  267 bits (683), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 77/253 (30%), Positives = 124/253 (49%), Gaps = 1/253 (0%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
           E  +H    VA       D+   P+H H + QLI    G IT T  N  W+VP   AVW+
Sbjct: 43  EDYQHTSRVVAAMARDLPDKFVIPMHSHFRSQLIFGCSGVITVTTVNGTWVVPSLRAVWV 102

Query: 71  PGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEP 129
           PGGVEH  + T + E+  ++++P A + +P  CC + +SPL RELI+             
Sbjct: 103 PGGVEHEMRTTGSVEMRTIYVDPEAASHLPRECCVVAVSPLLRELIVAAVRIPNDFSDGS 162

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
              +++ ++  E+   P   L LP+    ++  + + +   P     L ++      S+R
Sbjct: 163 REEKIMSLILTEIHPDPVLPLDLPMPQDRRLLRVCQAILTDPGSNSTLAEFGQTVGASQR 222

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
            L R+   ETG +F +WRQQ +L   ++ L +G  +  +A  LGY+S +AF  MF++ LG
Sbjct: 223 TLERMFPVETGTTFSKWRQQARLQCGIRMLAEGTPISTIALDLGYESPSAFSLMFRRALG 282

Query: 250 QTPGRYIARLTTV 262
             P  Y   +   
Sbjct: 283 VAPSEYFETIHAR 295


>UniRef50_C3KCF4 Putative transcriptional regulator n=1 Tax=Pseudomonas fluorescens
           SBW25 RepID=C3KCF4_PSEFS
          Length = 257

 Score =  266 bits (679), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 76/258 (29%), Positives = 124/258 (48%), Gaps = 2/258 (0%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           M+  LN    E +    A ++       +    P H H K QL+ A+ G +        W
Sbjct: 1   MIKPLNEFLQEINEGAWAVISSATDY-PENWVIPDHSHEKHQLLYAIEGVMVVYSALNQW 59

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA 119
            VPP   +W+P G  HS +     ++  +F+ P     MP    T+ ISPL  ELI    
Sbjct: 60  TVPPNRGIWMPSGQVHSLRCVGTLKMRSVFVRPDRFPNMPGEPKTVSISPLLSELIKASV 119

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
           +       +    R++ ++ DEL   P   L LP  + P+I+ +   +   P +   +  
Sbjct: 120 SLKPPYAEDSREARIMHLILDELAILPALPLALPQPADPRIKQICLALQDDPGDASTVAD 179

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
           W+    + +  + RL  K TG++F QWRQQ +L++AL+ +  G+ V  +A  LGY+S +A
Sbjct: 180 WSARLNLDQTTIQRLFRKATGMTFGQWRQQARLLLALERIAVGEKVIDIALELGYESPSA 239

Query: 240 FITMFKKGLGQTPGRYIA 257
           F +MFKK  G+TP ++  
Sbjct: 240 FTSMFKKQFGKTPSQFFR 257


>UniRef50_D2M677 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas
           palustris DX-1 RepID=D2M677_RHOPA
          Length = 294

 Score =  263 bits (671), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 100/271 (36%), Positives = 160/271 (59%), Gaps = 2/271 (0%)

Query: 4   RLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63
           R + + Y  +   +   A  + +      S  H+H K QL+    G I C VE+ +W+VP
Sbjct: 6   RGDWSSYVDEVPRDLVAANGVGSLESIEQSKRHRHDKAQLLYCARGVINCEVEDGVWIVP 65

Query: 64  PQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRT 122
           PQ A+WIPGG+ H+   +   E   LF+ P A   +P TCCT+ IS L R L++  +   
Sbjct: 66  PQCAIWIPGGLPHAAFGSGEVECICLFVAPDAAAGLPVTCCTIAISDLLRHLLIRASELP 125

Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182
                +    R++ V+ DEL + P +QL LP+ S P+++ + E++   P +   + +WAG
Sbjct: 126 ERYDVDGPDGRIVAVILDELAKAPVEQLCLPIPSDPRLKQLAELLVSSPADHATVAEWAG 185

Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242
             A+SER+L+R+++ E G+SF  WR+QL +I+AL+ L  G+TVQ VA  LGY+S ++F+T
Sbjct: 186 RVALSERSLSRMLMDEIGMSFGHWRRQLHVILALRRLSAGETVQTVALDLGYESASSFVT 245

Query: 243 MFKKGLGQTPGRYI-ARLTTVSPQSAKPDPR 272
           MF+K +G+ P RY+  R T+V    + P P+
Sbjct: 246 MFRKMVGKPPIRYLVERQTSVPLSRSDPPPK 276


>UniRef50_B8J3U2 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria
           RepID=B8J3U2_DESDA
          Length = 269

 Score =  260 bits (665), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 119/263 (45%), Positives = 155/263 (58%), Gaps = 1/263 (0%)

Query: 7   LNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQY 66
           L  + PD+      A  +    +E   P HQH  GQL+L L G+  C V   LW+VPPQ 
Sbjct: 7   LAAFSPDQWDIPVTARKVDVVRNEYEMPTHQHTAGQLLLTLRGSTACRVFEDLWLVPPQC 66

Query: 67  AVWIPGGVEHSNQVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQ 125
           AVW+P    H N++TA + +C LFI    + + P TCCTL ISPL RELI  +A      
Sbjct: 67  AVWVPPNTPHCNRITARSSVCLLFIRQEHIRLLPATCCTLSISPLVRELIRHVAALPPED 126

Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185
                  RLIQVL DEL + P   L LPVSS  +++++ E + + P E   L  WA    
Sbjct: 127 MLAERGERLIQVLLDELSRMPATGLRLPVSSDIRLQSIAESITEAPAERKDLSAWARHIG 186

Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245
           MS R+LARL+V+ETGLSF +WRQQL L+MA+Q L  G +VQ+ A  LGY+S TAFITMFK
Sbjct: 187 MSRRSLARLVVRETGLSFGRWRQQLLLVMAIQMLSDGISVQQTAWDLGYESVTAFITMFK 246

Query: 246 KGLGQTPGRYIARLTTVSPQSAK 268
           K LG +P +Y+ R      +S  
Sbjct: 247 KALGASPAKYVQRYFATGTESGS 269


>UniRef50_Q4K9E0 Transcriptional regulator, AraC family n=1 Tax=Pseudomonas
           fluorescens Pf-5 RepID=Q4K9E0_PSEF5
          Length = 271

 Score =  260 bits (664), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 106/252 (42%), Positives = 147/252 (58%), Gaps = 1/252 (0%)

Query: 7   LNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQY 66
               +PD       A  I         P H HRK QL+  L G ++C     LW+ PPQ 
Sbjct: 8   DQPQDPDAIARPVCALRISTQEQRWERPWHSHRKAQLLFPLSGVLSCESAEGLWLAPPQC 67

Query: 67  AVWIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQ 125
           AVWIP   +H  Q   NA    LF+EP  A ++P  CCTL +SPL +EL+   A      
Sbjct: 68  AVWIPSATDHRVQGLENALGYCLFVEPEHARSLPQACCTLAVSPLLQELLQRCAQLPYLY 127

Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185
             +    RL+ V  DEL   P++Q+HLP+  H ++R +   + + P    +LGQWA    
Sbjct: 128 DQQGAEGRLMAVALDELAAAPREQIHLPMPRHEQLRRLAGQILEQPERRLSLGQWAEQIG 187

Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245
           +SER+L+RLIV ETGLSF +W++QL +++ L+ L +GD+V++VA TLGYDS +AFI MFK
Sbjct: 188 LSERSLSRLIVAETGLSFGRWQRQLHILLGLKQLGRGDSVERVALTLGYDSASAFIRMFK 247

Query: 246 KGLGQTPGRYIA 257
           K +GQ PGR+ A
Sbjct: 248 KAVGQPPGRFFA 259


>UniRef50_Q2SP75 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella
           chejuensis KCTC 2396 RepID=Q2SP75_HAHCH
          Length = 275

 Score =  259 bits (663), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 77/259 (29%), Positives = 126/259 (48%), Gaps = 3/259 (1%)

Query: 6   NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65
           +   Y P R     VA      +    +P H+H   QLI A  G +    +  +W++PPQ
Sbjct: 18  DSGEYMPIRGERPIVARAREFPSGYRVTP-HKHECCQLIFATSGVMELVTDEGIWLIPPQ 76

Query: 66  YAVWIPGGVEHSNQVTANAELCFLFIEPSAVT--MPTTCCTLKISPLCRELILTLANRTT 123
            AVW+P  VEH  +   +  L  ++I+P A     P    TL+ISPL RELI+      +
Sbjct: 77  RAVWMPPNVEHGMRARGDVSLRTMYIQPHACPVSFPQKPRTLQISPLLRELIIRAMRVPS 136

Query: 124 TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183
                    R++ ++ +E+    ++ L LP +   +++ +   +   P +   L  W+  
Sbjct: 137 NYDEGGRDGRIMSLILEEIEWSGERPLRLPATRDSRLQNLCRAILANPADPRELKDWSTV 196

Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITM 243
              SER L+RL   E G+S++ WRQQ+  + A+  L  GD V  +A  LGY++ +AF  M
Sbjct: 197 IGASERTLSRLFRNELGVSYQYWRQQVAALNAIPRLAAGDPVTLIAADLGYETPSAFSAM 256

Query: 244 FKKGLGQTPGRYIARLTTV 262
           F++ +G  P  Y  R +  
Sbjct: 257 FRRIMGVAPSLYFQRQSES 275


>UniRef50_Q2F9R4 AraC-type DNA-binding domain-containing protein n=2
           Tax=Vibrionaceae RepID=Q2F9R4_9VIBR
          Length = 265

 Score =  257 bits (656), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 81/257 (31%), Positives = 130/257 (50%), Gaps = 2/257 (0%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           M   +     + + +   AV    H   +      H HR  QL+ A  G +    E+ LW
Sbjct: 8   MSQNVKAISLDANINCLEAVVIPKHY-ANGHVIDWHCHRHNQLVYASSGVMAVETESKLW 66

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA 119
           +VPPQ AVWIP    H   +  +A +  +++ PS  T +P     L +SP+ RE+I+ L+
Sbjct: 67  IVPPQRAVWIPAHESHKIHMYGDAAMKNVYLLPSIDTELPNQSDVLNVSPMLREMIIHLS 126

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
            +   Q +     R++QVL D+L   PQ  + +P+ +  K+  +   +   P +  +L Q
Sbjct: 127 EQPVVQASTDSYWRIVQVLLDQLKVAPQASIQVPLPNDAKLGLVCNSLLDKPADNRSLKQ 186

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
           WA    +S R L+RL   E G+SF ++RQQ++L  +L  L +   V  VA   G+ S +A
Sbjct: 187 WAEEINVSSRTLSRLFRNEVGMSFIEYRQQVRLFHSLTLLAQTHPVTTVALECGFTSVSA 246

Query: 240 FITMFKKGLGQTPGRYI 256
           F  +FK+  G TPGR+ 
Sbjct: 247 FNHLFKQSFGVTPGRFF 263


>UniRef50_Q391T4 Transcriptional regulator, AraC family n=8 Tax=Proteobacteria
           RepID=Q391T4_BURS3
          Length = 288

 Score =  255 bits (651), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 77/248 (31%), Positives = 118/248 (47%), Gaps = 3/248 (1%)

Query: 13  DRHHEAAVAFCIH-AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           D  H   +A  +  A  D      H+H + QL+    G        +LWM+PP  A+WIP
Sbjct: 36  DYQHAPGIAAVMPKAFPDGFVVAEHRHPRAQLVYTTTGIAEVIASQSLWMIPPHRALWIP 95

Query: 72  GGVEHSNQVTANAELCFLFIEPSAVT--MPTTCCTLKISPLCRELILTLANRTTTQRAEP 129
             + H+ +     E+   +++P A     P     + +SPL RELI+  +        + 
Sbjct: 96  PDLPHAMRAHGQLEMRTAYVDPRAYRSATPEQPSLVNVSPLLRELIVRASAFPVEVNPDG 155

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
               +IQ++  E+    +Q L LP     ++  + + +   P +   L +WA     S R
Sbjct: 156 RDDLVIQLMLAEIEWSAEQPLRLPSGQDRRLARVCDAILANPADQRTLTEWADEVGASSR 215

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
            LARL   ETGLSF QWRQQ ++  A   L  G +V  VA  LGY++T+AF T+F++  G
Sbjct: 216 TLARLFTAETGLSFSQWRQQARISAARPLLASGRSVIAVAAELGYETTSAFSTVFRRFAG 275

Query: 250 QTPGRYIA 257
            TP  Y  
Sbjct: 276 MTPSAYAK 283


>UniRef50_A5GBQ3 Transcriptional regulator, AraC family n=2 Tax=Bacteria
           RepID=A5GBQ3_GEOUR
          Length = 278

 Score =  254 bits (649), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 89/227 (39%), Positives = 124/227 (54%), Gaps = 1/227 (0%)

Query: 32  TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91
           ++ VH H +GQLI A  G +       +W+VPP  AVW+P   EH      +  L  LF+
Sbjct: 45  SAAVHVHPRGQLIYASSGMMRVICSRDVWVVPPSQAVWVPPNQEHEVYFPGDTALRSLFV 104

Query: 92  EPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150
           +PSAVT +P  C  LK++PL RELIL       +   +    R++QVL DEL       L
Sbjct: 105 DPSAVTGLPLQCTVLKVAPLLRELILRAVQIGNSYAPDGAEWRVMQVLLDELRIAEATPL 164

Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210
            LP++   ++  +++ + K P +   L  W      S R LARL V ETGL+F  WR++L
Sbjct: 165 RLPMARDERVMRVIDALLKSPGDNRGLDAWGKIAGASSRTLARLFVSETGLTFGGWRKRL 224

Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
            L  AL  L +G+ V  +A  LGY S +AFI MF+K LG +P RY  
Sbjct: 225 LLHKALDRLDRGEQVTGIAFDLGYQSLSAFIEMFRKELGVSPRRYAR 271


>UniRef50_A9FA95 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria
           RepID=A9FA95_SORC5
          Length = 277

 Score =  253 bits (647), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 105/243 (43%), Positives = 150/243 (61%), Gaps = 1/243 (0%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
             A A  +   T  L S  H HR+ QL     G +TC   NALW+VPP+ A+WIP GV H
Sbjct: 22  RPANAVGLSMLTGGLESEFHSHRESQLFFLERGEVTCEASNALWIVPPRSALWIPAGVLH 81

Query: 77  SNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135
             +  A  E   +F+EP  A ++P  CC + ++PL REL++ LA R      +    RL+
Sbjct: 82  KIRGRAPLEGYGVFMEPDVAPSLPAECCAVSVTPLFRELLVRLAARPALYDLDGPDARLV 141

Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
            VLFDEL     ++  LP+ + P++R +V+ MA+ P +   +G WA    + ER L RL+
Sbjct: 142 AVLFDELAAATIEKHRLPMPADPRLRKLVDAMAENPADGATMGSWARRIGVGERTLNRLL 201

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           V+ETGLSF +WRQQL +++ALQ L +G +VQ VA  LGY+S ++F+TMF+K LG +P RY
Sbjct: 202 VRETGLSFGRWRQQLHIVLALQRLSRGASVQSVASDLGYESASSFVTMFRKALGASPARY 261

Query: 256 IAR 258
           +AR
Sbjct: 262 MAR 264


>UniRef50_A8I0S5 Transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571
           RepID=A8I0S5_AZOC5
          Length = 272

 Score =  253 bits (646), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 95/246 (38%), Positives = 146/246 (59%), Gaps = 2/246 (0%)

Query: 13  DRHHEAAVAFCIHAGTDELT-SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           D    A V     A  + L  SP H H+K QL+  + G I C VE+A+W+VPPQ AVWIP
Sbjct: 14  DEVPRALVTANAVASLESLEQSPRHHHQKAQLLFTVRGVINCEVEDAVWIVPPQCAVWIP 73

Query: 72  GGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130
           GGV H+   +   E   LFIEP A   +P  CCT+ +S L R L++           +  
Sbjct: 74  GGVPHTVFGSGEVECISLFIEPPATPELPNACCTITVSSLLRHLLMRANELPELYDVDGP 133

Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190
             R++ V+FDEL   P + L LP+    +++ + +++   P +   + +WA   A+SER+
Sbjct: 134 DGRIVSVIFDELAAAPVEDLRLPIPGDVRLKKLTDLLIAAPADHATVAEWASRIALSERS 193

Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250
           L R++ ++ G+SF +WR+QL +++AL+ L  G TVQ VA  LGY+S ++F+TMF+K +G+
Sbjct: 194 LNRMLAEQVGMSFGRWRRQLHVVLALRRLSAGQTVQAVAMDLGYESASSFVTMFRKMVGK 253

Query: 251 TPGRYI 256
            P RY+
Sbjct: 254 PPSRYL 259


>UniRef50_B4SJK4 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria
           RepID=B4SJK4_STRM5
          Length = 282

 Score =  252 bits (645), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 103/262 (39%), Positives = 137/262 (52%), Gaps = 1/262 (0%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           PDR     +   +    D    P H HRK QL++A  G I       LW+VPPQ A+WIP
Sbjct: 16  PDRVDLPVMVLGLDPIPDAWQMPFHAHRKAQLLVATRGLIMLETAAGLWVVPPQGAIWIP 75

Query: 72  GGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130
           GG+ H    +       +F+EP  V  +PT C  + I+P  + L+   +           
Sbjct: 76  GGLSHRASSSGRPHGFVVFVEPGVVPGLPTHCAAMAITPFMQALLERASALPGHYEPGSA 135

Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190
             RL+ V  DEL   P + LHLP+ S  ++R +   M   P E   L  WA    MSERN
Sbjct: 136 QDRLMAVFLDELIAAPPEWLHLPMPSDARLRRLANAMLDTPAERATLEVWASRIGMSERN 195

Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250
           ++RL   ETGLS R+WR+QL +++AL  L KG TVQ VA  LGYDS  AF+TMF+K +G 
Sbjct: 196 MSRLFSGETGLSVRRWRRQLHVVVALPLLAKGRTVQAVADHLGYDSAGAFVTMFRKTVGA 255

Query: 251 TPGRYIARLTTVSPQSAKPDPR 272
            P R++A   T  P S   D R
Sbjct: 256 PPKRFLAERGTRQPVSDADDQR 277


>UniRef50_Q0BZS2 Transcriptional regulator, AraC family n=1 Tax=Hyphomonas neptunium
           ATCC 15444 RepID=Q0BZS2_HYPNA
          Length = 260

 Score =  252 bits (645), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 70/248 (28%), Positives = 115/248 (46%), Gaps = 1/248 (0%)

Query: 8   NGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYA 67
           + ++ D      VA              H H + QL+ A  G ++   +   +++PPQ A
Sbjct: 12  STHQLDLSRRPVVALA-DEYPSGFVDTAHSHERIQLLYACSGVMSVVTDKTSFVIPPQRA 70

Query: 68  VWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRA 127
           VWIP  V+H         L  L+I+P        C  +++  L R LIL +         
Sbjct: 71  VWIPSQVQHEVSCRGPVSLRTLYIDPRYERDDPDCHIVEVGQLLRALILEVTQFEHDYDL 130

Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187
           +    +++ +L  EL   P+     P+ + P++  +   + + P +   + QWA    MS
Sbjct: 131 QGREGQIVSLLVSELLASPKVPYAAPMPTDPRLVRVCREIIEHPSDQRDIDQWADIAGMS 190

Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247
            R+  R   +ETG+    WRQQ++L+ AL  L  G +V  VA  +GYDS +AF  MF++ 
Sbjct: 191 RRSFTRAFKRETGMGVALWRQQVRLLEALSLLSTGSSVTSVAMDVGYDSASAFCAMFQRA 250

Query: 248 LGQTPGRY 255
            G +P RY
Sbjct: 251 FGVSPSRY 258


>UniRef50_Q2BLH8 Transcriptional Regulator, AraC family protein n=1
           Tax=Neptuniibacter caesariensis RepID=Q2BLH8_9GAMM
          Length = 260

 Score =  251 bits (641), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 85/231 (36%), Positives = 130/231 (56%), Gaps = 1/231 (0%)

Query: 31  LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLF 90
           +    H+H +GQL  A  G I    +  +W+VPP  AVW+PG V H      +AEL  LF
Sbjct: 30  VDMDPHRHPRGQLAYAAEGIIRVYTDEGVWVVPPSQAVWVPGDVVHRTTAEVSAELRHLF 89

Query: 91  IEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ 149
           ++P+ ++ +   C  +++SPL RELI+ +A+            RL  V+ DEL       
Sbjct: 90  VDPAYLSGLSDQCSVVEVSPLLRELIMRVADFGDDYSTNSPASRLCAVILDELQNLKPSL 149

Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209
           LHLP ++  +++ ++  M + P     L  WA     SER ++RL VKETG++F+QWR+Q
Sbjct: 150 LHLPGATDRRLQRVMHAMVENPSAEIGLNYWAEQVGASERTISRLFVKETGMNFQQWRKQ 209

Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260
           L L  A+  L K + V  +A  LGY S +AF+ MF++ LG+ PG+Y   L+
Sbjct: 210 LLLQEAVDRLGKRNAVVDIALELGYRSPSAFVAMFRQALGKPPGQYFKDLS 260


>UniRef50_Q14GY1 Transcriptional regulator araC family protein n=19 Tax=Francisella
           RepID=Q14GY1_FRAT1
          Length = 282

 Score =  249 bits (637), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 71/227 (31%), Positives = 113/227 (49%), Gaps = 1/227 (0%)

Query: 32  TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91
            S  H HR+G++     G +  +  N  W++P   A WIP    H  +++   E   +FI
Sbjct: 44  ESDWHHHRRGKIFCIESGLVHVSTPNGSWVLPSNRAGWIPPNTSHKIRISGIVEGWVIFI 103

Query: 92  EPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150
            P+    +P +   + +S + R L L                 + +++ +E+   P++ L
Sbjct: 104 HPNMCDDLPKSSRVIPMSEVLRALALRATEWDKYNNLSLEQEHIAKIICNEIRLAPEEAL 163

Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210
           HLP+    ++  +   +   P    +L QWA F AMS R L R  + ETGLSF +WRQQ 
Sbjct: 164 HLPMPKTDRVIKVANAIIDNPSISKSLEQWAAFAAMSPRTLRRAFLSETGLSFSRWRQQA 223

Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           QL   L  L K  +V +V+ +LGY S + FI MF+K  G+TP +Y +
Sbjct: 224 QLARGLDMLAKDISVTEVSDSLGYASPSNFIAMFRKAFGKTPKQYFS 270


>UniRef50_D1RUP3 Transcriptional regulatory protein n=2 Tax=Enterobacteriaceae
           RepID=D1RUP3_SEROD
          Length = 285

 Score =  249 bits (636), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 74/248 (29%), Positives = 125/248 (50%), Gaps = 4/248 (1%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
           + D    + +A            P+H HR+ QL+    G +        W+VPPQ AVW+
Sbjct: 32  DIDHVPRSVIAIGTDY-PSGHLLPMHSHRRAQLLYGATGVMHVFTHQGNWIVPPQRAVWL 90

Query: 71  PGGVEHSNQVTANAELCFLFIEPSA--VTMPTTCCTLKISPLCRELILTLANRTTTQRAE 128
           P  + H  ++        L+IEP+A   + P  C  + ++PL R+L++   +       +
Sbjct: 91  PPQMPHEVRMVG-VTTRSLYIEPTALLASQPQVCQVVSVTPLMRQLLMAAVDMPLEYDPD 149

Query: 129 PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSE 188
                L+ +L  EL Q     LH+P+ +  ++  + ++    P    +  +WA    MS 
Sbjct: 150 GRDGALVFLLLHELAQLQSLPLHIPLPADRRLGELCQLFLLQPNAHDSPQEWATRLYMSI 209

Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGL 248
           R  +R    +TG+SF QWRQ+  +++AL  L +G++V +VA  LGY+S+ AF TMF++ L
Sbjct: 210 RTFSRFFRAQTGMSFSQWRQRACVVLALAQLTEGNSVTQVALELGYESSAAFATMFRRVL 269

Query: 249 GQTPGRYI 256
           GQ P  Y+
Sbjct: 270 GQAPSCYL 277


>UniRef50_A0AX10 Transcriptional regulator, AraC family n=6 Tax=Burkholderia
           RepID=A0AX10_BURCH
          Length = 277

 Score =  249 bits (636), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 74/243 (30%), Positives = 121/243 (49%), Gaps = 1/243 (0%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
           +  +A         +  P H HR+GQLI A+ G +    +   W+VP   AVW+PGG +H
Sbjct: 34  DKQIAVVASDSPAGMAYPPHSHRQGQLIHAISGVMIVHADAGSWVVPTGRAVWVPGGTQH 93

Query: 77  SNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135
             +   + ++  +F+ P    ++PT C  +++  L RELI+T  +            R++
Sbjct: 94  EIRSAGDVQMRTVFVGPEVRPSLPTECRVIEVGTLLRELIVTACDLPADYDLSHRAGRVL 153

Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
            ++ DE+   P   LH+P+  HP +  +   +   P     L  WA    M+ER LAR  
Sbjct: 154 ALILDEIEIAPSLSLHVPMPRHPALVALCTRLINDPSSVVTLQAWARDAHMNERTLARAF 213

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            +ETG++   W +  +L+++L  L  G  + ++A   GYDS +AF  MF+K LG  P  Y
Sbjct: 214 KRETGMTHGAWCRHARLLLSLPRLAAGTPILELALEHGYDSPSAFAAMFRKALGVAPSEY 273

Query: 256 IAR 258
             R
Sbjct: 274 FRR 276


>UniRef50_Q0B9P3 Transcriptional regulator, AraC family n=14 Tax=Proteobacteria
           RepID=Q0B9P3_BURCM
          Length = 322

 Score =  249 bits (635), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 76/249 (30%), Positives = 117/249 (46%), Gaps = 3/249 (1%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
           +P  H   +V    +      T P H H +GQ   A  G I+ +  +  W+VPPQ A W+
Sbjct: 70  DPYDHIPRSVVVTANDYPAGTTFPEHAHGRGQFAFASRGTISVSTPHGRWLVPPQRACWV 129

Query: 71  PGGVEHSNQVTANAELCFLFIEPSAVT---MPTTCCTLKISPLCRELILTLANRTTTQRA 127
           P GV H   +T    +   F+   A     +P  C    +SPL R+LI            
Sbjct: 130 PPGVRHEMTMTGAVTMLNTFVSDDAARAAGLPDQCGVYGVSPLLRQLIDDAIELPAMYDV 189

Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187
           +    +L+ +L  E+   P+  LH P+ +  ++ ++   +   P     L Q A    +S
Sbjct: 190 DGRAGKLMALLVAEIATMPRLSLHAPLPADARLASICRHLFASPSIAADLDQVATHAGVS 249

Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247
            R   RL   +TG+SF  WRQQ+ ++ A+  L  G  V +VA  LGY S +AF + F++ 
Sbjct: 250 RRTFTRLFRAQTGVSFAAWRQQVCMLAAITRLSDGQPVTRVAFELGYASASAFTSAFRRI 309

Query: 248 LGQTPGRYI 256
           LG TP RY+
Sbjct: 310 LGDTPSRYL 318


>UniRef50_B0UH11 Transcriptional regulator, AraC family n=3 Tax=Rhizobiales
           RepID=B0UH11_METS4
          Length = 287

 Score =  249 bits (635), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 83/253 (32%), Positives = 128/253 (50%), Gaps = 5/253 (1%)

Query: 6   NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65
           +   YE  RH   A+     +G      P H H++ QLI A  G +  T  + LW++PPQ
Sbjct: 19  DPEDYEASRHGIVAMPKEFPSG---FHVPSHVHKRAQLIYATAGVMEVTTADGLWLLPPQ 75

Query: 66  YAVWIPGGVEHSNQVTANAELCFLFIEPSAVT--MPTTCCTLKISPLCRELILTLANRTT 123
            AVW+P G+ H+ +   +  L  L+I   A     P T  ++++S L RELIL +A    
Sbjct: 76  RAVWMPAGIAHAMRARCDVSLRTLYIAQEACPASFPETPRSVRVSVLLRELILRVARMPL 135

Query: 124 TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183
            +      RR++ +L  E+  +    L+LP+    ++  + + +   P +   LG WA  
Sbjct: 136 EREPTEHERRVLDLLLYEITWEADGVLYLPMPKDKRLAGLCQALIDDPGDGRDLGDWARQ 195

Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITM 243
              S R LARL  +E G SF  WR+QL+ + AL  L  G+ +  VA  LGY++  AF  M
Sbjct: 196 AGASSRTLARLFKREFGSSFLVWRKQLRALCALPRLAAGEPISVVAIDLGYETPGAFAAM 255

Query: 244 FKKGLGQTPGRYI 256
           F+  +G+ P RY 
Sbjct: 256 FRGVMGERPSRYF 268


>UniRef50_Q11DK3 Transcriptional regulator, AraC family n=1 Tax=Chelativorans sp.
           BNC1 RepID=Q11DK3_MESSB
          Length = 262

 Score =  248 bits (634), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 64/227 (28%), Positives = 112/227 (49%)

Query: 30  ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89
               P H H + QL  +L G  +   E A +++PP  A+WIP GV H      N     +
Sbjct: 24  GYIDPFHSHERAQLSFSLSGVQSLITETATYVLPPNRAIWIPPGVRHKTHCRENVRFYAV 83

Query: 90  FIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ 149
           +I+P+   +P  C   ++S L R LI  +              +++++L DE+P+ P   
Sbjct: 84  YIDPTLDNLPKECRVFEVSDLVRALIGEIMTFNFAYNEFGREGQIVRLLLDEIPRMPTVD 143

Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209
           + +P+ +  +I  +  M+ + P +   +  WA    M  R   R+  K+TG++   WR Q
Sbjct: 144 IQIPMPTDSRILRVCNMLIEQPGDAHDIDYWASVANMGRRTFTRVFKKQTGMALSTWRLQ 203

Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           ++L+ AL  L  G ++  VA+ +GY+S +AF ++F +  G  P  Y 
Sbjct: 204 VRLMHALSLLHAGHSITSVAYGIGYESISAFTSVFHRSFGFPPSHYR 250


>UniRef50_A6W3J4 Helix-turn-helix-domain containing protein AraC type n=9
           Tax=Gammaproteobacteria RepID=A6W3J4_MARMS
          Length = 273

 Score =  248 bits (634), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 97/245 (39%), Positives = 147/245 (60%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
            D +    +     +      +P H H+KGQL+L L G +T  +++ +W+VPP+ AVWIP
Sbjct: 22  ADHYPHRVLVLRSQSVPHSEETPWHHHQKGQLVLPLTGVVTSFIDDKMWLVPPRCAVWIP 81

Query: 72  GGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131
             V H NQ++ NA++C LF++ + + +P   CTL I+P  RELIL L  +   ++ +P T
Sbjct: 82  SNVMHRNQISPNADVCMLFVDSTNLALPEITCTLTITPFVRELILHLHTQQDYEKTDPAT 141

Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191
            RL+ VL D+L Q  +++   P+   P +  +   +   P E   LG+WA  FAMSER L
Sbjct: 142 GRLVDVLLDQLIQLEREEFDFPIPDEPTLNRLALELIARPNEKRTLGEWASDFAMSERTL 201

Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251
           AR+I +   L+F QWR QL +++ALQ L     +Q ++  LGYDS +AFIT FKK LG++
Sbjct: 202 ARMIKRHVQLTFGQWRSQLHIVLALQKLAINLPIQTISEELGYDSVSAFITFFKKALGKS 261

Query: 252 PGRYI 256
           P +Y 
Sbjct: 262 PRQYR 266


>UniRef50_A6W2J3 Transcriptional regulator, AraC family n=1 Tax=Marinomonas sp.
           MWYL1 RepID=A6W2J3_MARMS
          Length = 267

 Score =  248 bits (634), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 135/266 (50%), Gaps = 5/266 (1%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDE---LTSPVHQHRKGQLILALHGAITCTVENA 58
           M ++  +    D   ++ V   +     E     + +H+H  GQL+ +L G ++   E+ 
Sbjct: 1   MAKMKKSLLLADIIDQSDVDLILSVELIENQIRETELHRHAFGQLVGSLEGLLSVQTESG 60

Query: 59  LWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILT 117
            W+VP  + VWIP    H  +         ++++P    +  ++  T + +PL +EL+  
Sbjct: 61  WWVVPATHTVWIPPNTLHGAKSHGPFRGWSVYLDPKRSQLLDSSPKTFQTTPLLKELVHR 120

Query: 118 LANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGAL 177
            A+ +    ++ +  RL +VLFDE+   P+    L     P ++ M + +     +  +L
Sbjct: 121 AASWS-DDTSQAVKSRLSEVLFDEIVNLPETLFGLLQPGLPSLKKMTDGLLSNLADNRSL 179

Query: 178 GQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDST 237
            +WA    +S R LAR   ++TGL F +WRQ+ +++ A++ L     V  +A TLGY++ 
Sbjct: 180 EEWARSIGLSSRTLARRFNEQTGLGFSEWRQRARVLSAIEMLADNVPVTNIAFTLGYENV 239

Query: 238 TAFITMFKKGLGQTPGRYIARLTTVS 263
           +AFI MF++ +G TPG+YI R    S
Sbjct: 240 SAFIAMFRRVMGVTPGQYIQRHNKES 265


>UniRef50_A9HXG4 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria
           RepID=A9HXG4_BORPD
          Length = 284

 Score =  248 bits (633), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 72/247 (29%), Positives = 113/247 (45%), Gaps = 1/247 (0%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
           E  +H    V           T+  H H +GQL+ A+ G +  +  +  W +P   A+W+
Sbjct: 34  EDYQHVPRLVTALAKDFVPSETTGPHSHPRGQLVYAIEGVMRVSTPDGFWTLPSLRALWV 93

Query: 71  PGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129
           P G  H  Q+     +  L++  +A  ++   C  +++S L RELIL L         E 
Sbjct: 94  PPGTVHGIQMVGKVSMRTLYVHANAANSLWDRCQVVEVSGLLRELILALTAEPIEYALEG 153

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
              ++  +L  EL   P   + +P     +++T+   +   P     +  W      S R
Sbjct: 154 RGGQIATLLLTELKAAPVIPIRIPWPQDRRLQTVCRAILAQPGLARTVDDWGDEVGASGR 213

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
            L RL   E GL++RQW QQ++L  AL  L  G  V +VA  LGY S +AF  MF++ LG
Sbjct: 214 TLIRLFQAEVGLNYRQWVQQVRLAEALHRLSLGQPVARVAAELGYRSPSAFSAMFRRALG 273

Query: 250 QTPGRYI 256
             P  Y+
Sbjct: 274 SPPQAYL 280


>UniRef50_Q4K821 Transcriptional regulator, AraC family n=22 Tax=Bacteria
           RepID=Q4K821_PSEF5
          Length = 274

 Score =  248 bits (633), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 3/255 (1%)

Query: 13  DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72
           D+     +A       D    P H+HR+ QL+    G +  + +   W+VPPQ AVWIP 
Sbjct: 21  DQTPRPVLAIGTDY-PDGQRLPRHRHRRAQLLYGATGVMQVSTDQGNWVVPPQRAVWIPP 79

Query: 73  GVEHSNQVTANAELCFLFIEPSAVTMPTT-CCTLKISPLCRELILTLANRTTTQRAEPMT 131
           GVEH   +        L+IEP+A  + ++ C  + ISPL R+L+L   +       +   
Sbjct: 80  GVEHEVLMLG-VSTRSLYIEPAAAPLDSSGCRVIGISPLLRQLLLEAVDMPLEYDLDGRD 138

Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191
             LI +L  E+ + P   LH+P+ +   +  +       P    +   WA    +S R  
Sbjct: 139 GLLINLLLHEIQRCPGLPLHIPLPAGGPLLELCRAFLARPDVHQSPLHWADRLHVSLRTF 198

Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251
            R   +ET +SF QWRQ+  +I AL  L   + V ++A  LGYDS  AF TMF++ LGQ+
Sbjct: 199 NRWFRQETDMSFVQWRQRACVIQALARLAAAEPVTRIALDLGYDSPGAFSTMFRRVLGQS 258

Query: 252 PGRYIARLTTVSPQS 266
           P  Y+ +      ++
Sbjct: 259 PSTYLNQEHPAPGKA 273


>UniRef50_B0VLM5 Putative transcriptional regulator (AraC family) n=1
           Tax=Acinetobacter baumannii SDF RepID=B0VLM5_ACIBS
          Length = 275

 Score =  247 bits (632), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 123/260 (47%), Gaps = 4/260 (1%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           +M   ++N ++    H  A     +         +HQH +GQLI A  G +  + E  LW
Sbjct: 7   VMIEKSINPHDYQHIHSPASVMPKNYHAKHRI-DLHQHERGQLIYATSGIMELSTEEELW 65

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP--SAVTMPTTCCTLKISPLCRELILTL 118
           ++PP++ VWIP    H      +  L  L+I+    +   P   C + +S L  EL++  
Sbjct: 66  LIPPRFGVWIPAYTPHQMTTKTDVHLNTLYIDTYRWSKPFPDKPCGVTVSGLLHELLIRA 125

Query: 119 ANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVS-SHPKIRTMVEMMAKGPVEWGAL 177
           A+         +  + + +L +EL       L  P      +++ +  ++   P +  +L
Sbjct: 126 ASFPIEYPLHSVEWKTMDLLVEELKWTKGISLMTPEPYMDKRLQDLCNILIINPADNHSL 185

Query: 178 GQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDST 237
            +W+     + R L+RL  +E   +F  WRQQL+++ A+  L+ G  +  ++  LGY S 
Sbjct: 186 EEWSSQVGATTRTLSRLFKQEMNTTFTLWRQQLRIVHAIPSLMAGKPISDISQELGYSSQ 245

Query: 238 TAFITMFKKGLGQTPGRYIA 257
           + F  MFKK +G+TP  YIA
Sbjct: 246 STFTVMFKKIMGKTPTEYIA 265


>UniRef50_Q39GD4 Transcriptional regulator, AraC family n=7 Tax=Betaproteobacteria
           RepID=Q39GD4_BURS3
          Length = 278

 Score =  247 bits (632), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 74/233 (31%), Positives = 112/233 (48%), Gaps = 1/233 (0%)

Query: 31  LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLF 90
                H H +GQ+     G       +  W++PP  A WIP G +H   ++       + 
Sbjct: 46  REVDWHSHLRGQVFCVESGFAHVRTPHGSWLLPPHRAGWIPPGEQHKVSISGALSGWSVV 105

Query: 91  IEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ 149
           I P+A   MP   C + I+ L R L+    +     R +    R+  VL DE+ + P + 
Sbjct: 106 IAPAASRRMPDQPCVIAITELMRALVRRAVSWADQDRLDIEQARISIVLLDEMRRAPHEP 165

Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209
           LHLP+    ++  +   +   P +   L  WA +  +S R L+RL V ETG SF QWRQQ
Sbjct: 166 LHLPMPRDRRLLRIANAILGQPHDSRTLEAWAEWAGLSARTLSRLFVAETGTSFAQWRQQ 225

Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262
            +L  AL+ L  GD+V  +A  LGY + + FI MF++  G +P  Y A+    
Sbjct: 226 ARLTHALERLASGDSVANIADALGYATPSNFIAMFRRAFGDSPAHYFAKRKQP 278


>UniRef50_B4SSQ8 Transcriptional regulator, AraC family n=3 Tax=Stenotrophomonas
           RepID=B4SSQ8_STRM5
          Length = 265

 Score =  247 bits (630), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 78/244 (31%), Positives = 122/244 (50%), Gaps = 2/244 (0%)

Query: 15  HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGV 74
                     H       SP H+HR+ QL+ A  G +    E   W+VP   A+W+P G+
Sbjct: 23  IQRPVTCRARHYQAGTHISP-HKHRRHQLVYAQSGLMVVRSEVGRWVVPSTRAIWVPAGI 81

Query: 75  EHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRR 133
            H+    A   +  L++EP  A  +P     ++++PL REL+L  +        +    R
Sbjct: 82  AHAVDCIAEVHMRSLYVEPEFAPHLPAEAFAIQVAPLLRELLLAASLIEGAHEDDSRDGR 141

Query: 134 LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193
           ++++L DEL +     LHLP  S P++  +   + K P +   L  WA    +  + + R
Sbjct: 142 VVRLLLDELRRMDALPLHLPEPSDPRLLKICLHIQKHPADDATLQDWAQALQVDVKTIQR 201

Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253
               E G++F QWRQQ +L+ A++ L  GD V  VA  +GYDS +AF +MFK+ LGQTP 
Sbjct: 202 HFTSELGMTFGQWRQQARLLAAMERLAVGDKVIDVALAMGYDSPSAFTSMFKRQLGQTPA 261

Query: 254 RYIA 257
            +  
Sbjct: 262 AFFR 265


>UniRef50_A1K8N6 Putative AraC-family transcriptional regulator n=1 Tax=Azoarcus sp.
           BH72 RepID=A1K8N6_AZOSB
          Length = 261

 Score =  244 bits (623), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 4/247 (1%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           P    +  ++  +     +   P H H  GQL   + GA+   V  + W+VPP  A+W+P
Sbjct: 12  PQPTTQDPISVLVREPPPDSIIPWHSHPWGQLAYPVSGAVCMDVPGSRWLVPPFRALWVP 71

Query: 72  GGVEHSNQVTANAELCFLFIEPSAVTMPT-TCCTLKISPLCRELILTLANRTTTQRAEPM 130
            GVEH   +  +  L  + +      +P   C  L+I+PL RELI  L  R         
Sbjct: 72  PGVEHQQSMLGHVRLRVVHVAEGCAALPESHCAVLEITPLLRELIEALLPRPP---QSER 128

Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190
             ++  +L  EL Q     L LP  S  ++  + E +   P +   L +WA     S R 
Sbjct: 129 RTQIQALLLTELSQARTLNLRLPQPSDRRLAALCEALMADPADNAPLTEWARRVGASGRT 188

Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250
           LARL   E G+SF  WRQQ++L  A   + +G    ++A  LGY S +AF  MF++  G 
Sbjct: 189 LARLFQSEMGMSFGLWRQQVRLTHATVLVAQGRPYAEIAAELGYASPSAFSAMFRRAFGC 248

Query: 251 TPGRYIA 257
           +P  + A
Sbjct: 249 SPRAFYA 255


>UniRef50_Q8L1B2 Transcriptional factor PhcT (Fragment) n=1 Tax=Comamonas
           testosteroni RepID=Q8L1B2_COMTE
          Length = 246

 Score =  244 bits (623), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 71/235 (30%), Positives = 120/235 (51%), Gaps = 2/235 (0%)

Query: 13  DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72
           D      V          +++  H H KGQL+ A  G +    +   W+VPP  A+WI  
Sbjct: 13  DSLAWPVVVMESRW-PVGMSTGWHSHPKGQLLYATEGVMVVHTDAGSWIVPPNRALWITT 71

Query: 73  GVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131
           G+ H+  +  +  +   +I+ + VT +P     + +SPL REL++           +   
Sbjct: 72  GLRHTVTMAGDVLMRTAYIDAAKVTTLPHESSVINVSPLLRELLVEAVRIAFHTEPKGRD 131

Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191
            RL+++L DE+       LHLP+    ++R++ + ++  P +     +WA    + ER L
Sbjct: 132 ARLLELLIDEIRVSTTLPLHLPMPKDGRLRSICDQLSATPSDSSNAAEWAASIHVGERTL 191

Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKK 246
            RL  KETG++F QWR+Q +L+ AL+G+  G+ V +VA   GY S +AF  MF++
Sbjct: 192 HRLFAKETGMTFAQWREQARLLHALRGIAAGNKVIEVALDCGYGSASAFAAMFRR 246


>UniRef50_D1SXH7 Transcriptional regulator, AraC family n=1 Tax=Acidovorax avenae
           subsp. avenae ATCC 19860 RepID=D1SXH7_9BURK
          Length = 269

 Score =  244 bits (622), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 80/265 (30%), Positives = 130/265 (49%), Gaps = 2/265 (0%)

Query: 5   LNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPP 64
                 +        +            +  H HR+GQLI    G ++   +   W++P 
Sbjct: 3   DTAAWIDLHDDDTGPLVVGRAGTQVNHDTAPHSHRRGQLIGCRRGVLSVGADTGHWVIPA 62

Query: 65  QYAVWIPGGVEHSNQVTANAELCFLFIE-PSAVTMPTTCCTLKISPLCRELILTLANRTT 123
           ++A+W+P G  HS+++        L++  P+  ++P + CT+ +SPL  E  L  A R  
Sbjct: 63  RHAIWLPPGRPHSSRMHGPFTGWSLYVAGPACQSLPDSPCTVAVSPLLWEAALRCAER-A 121

Query: 124 TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183
               +P+  RL  V+ DEL     + L LP+ S  ++  +   +   P    +L  WAG+
Sbjct: 122 NALPDPVQDRLAGVILDELRSMVPRPLGLPMPSDARLLRIARGLLADPARRQSLQAWAGW 181

Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITM 243
            A+S R L+R  V ET LSF  W Q+++L+ +L+ L  G +V +VA  LGYDS +AFI +
Sbjct: 182 AALSPRTLSRRFVAETSLSFTAWTQRVRLLRSLEWLADGQSVTQVALDLGYDSVSAFIAL 241

Query: 244 FKKGLGQTPGRYIARLTTVSPQSAK 268
           FK+ LG+TP  Y  R      +   
Sbjct: 242 FKRELGRTPAAYFGRQAPADRRMPS 266


>UniRef50_D0J513 Pyridoxamine 5'-phosphate oxidase-related protein n=2 Tax=Comamonas
           testosteroni RepID=D0J513_COMTE
          Length = 265

 Score =  243 bits (620), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 78/265 (29%), Positives = 140/265 (52%), Gaps = 6/265 (2%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           +MH L      PD     +V         EL+S +HQH +GQL  ++ G I+  V+  LW
Sbjct: 4   LMHLLGSYMDSPD---GPSVVAATRMLESELSSEMHQHARGQLFGSIKGLISVQVDGGLW 60

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLA 119
           +VP  +AVW+P    H+ +          ++ E +   +P   C +++S L RE +L +A
Sbjct: 61  VVPAIHAVWLPPHHAHAGRSFGPYHGWSAYVAEAACANLPAQPCIIRVSGLLREAVLRIA 120

Query: 120 --NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGAL 177
                 + ++      +  V+ DE+   P ++  LP+ +  +++ + + +   P +   +
Sbjct: 121 SSMPQASDQSSQAQSHICAVVLDEIRSLPVEEFGLPIPADARLQRIAKALIANPADERNI 180

Query: 178 GQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDST 237
             WA F A+S R L+R  V ETG +F  WRQ+++L+ +L+ L +G ++  +A  LGY S 
Sbjct: 181 DDWASFGAISSRTLSRRFVSETGFNFTAWRQRVRLLRSLEMLAEGISITAIALDLGYASI 240

Query: 238 TAFITMFKKGLGQTPGRYIARLTTV 262
           +A+I++F++  G+TP  Y +RL  V
Sbjct: 241 SAYISLFRRTFGETPACYRSRLKAV 265


>UniRef50_D0B292 Transcriptional regulator n=40 Tax=Rhizobiales RepID=D0B292_BRUME
          Length = 289

 Score =  243 bits (620), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 79/257 (30%), Positives = 125/257 (48%), Gaps = 2/257 (0%)

Query: 13  DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72
           +     A+A       D    P H H + QL+ A  G +  T +   WM+P  +A+WIP 
Sbjct: 29  ESMTGPAIALPTRY-PDGYFVPRHSHSRAQLLCASQGVVLVTTDAGRWMIPSDHAMWIPA 87

Query: 73  GVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131
           GVEHS  +  +  +  ++I   A++ +P     + ++ L R LI+   +  +    E   
Sbjct: 88  GVEHSVAILGDVFMRSIYISVDAISGVPNYLHVVGLTDLMRCLIIDATSHDSIPAPESRD 147

Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191
             +I+++  +L   P+  L LP  S P+++ +     K P     + +WA   AMS R+ 
Sbjct: 148 GLVIELILRDLHTLPEYPLGLPFPSDPRLQKLCRDFVKKPSSRATIDEWADRMAMSRRSF 207

Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251
            R   +ETG+S   WRQQ  L  A+  L +G+ V  VA  LGYDS +AF TMF++ LG  
Sbjct: 208 TRHFQRETGVSLSVWRQQACLFAAVPRLSEGEPVTSVALDLGYDSVSAFTTMFRRMLGVP 267

Query: 252 PGRYIARLTTVSPQSAK 268
           P  Y  RL     + + 
Sbjct: 268 PKFYQPRLDVAPFERSD 284


>UniRef50_Q47EU9 Transcriptional regulator, AraC family n=4 Tax=Bacteria
           RepID=Q47EU9_DECAR
          Length = 273

 Score =  242 bits (619), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 78/245 (31%), Positives = 114/245 (46%), Gaps = 2/245 (0%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
             E+  P H+H   QL   L G I  +     W+VP   AVWIP  +EH   +    E  
Sbjct: 29  PAEVYVPPHRHDWAQLAYPLRGGIRISAAGMTWLVPALRAVWIPPHIEHDLLMLGEVEFR 88

Query: 88  FLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTT-QRAEPMTRRLIQVLFDELPQQ 145
            ++I P    +P   C  +++S L R L   L+      Q      R++  +L  E+ + 
Sbjct: 89  TVYIAPEVAPLPLDACSVIEVSDLMRALFEALSEADGDGQEPSLRQRQVTALLLTEIRRA 148

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
           P   L LP+    +++ + + +   P    +L +WA     SER LARL V E  LSF  
Sbjct: 149 PPLSLGLPMPHDRRLQALCQALIDEPASPLSLAEWAARVGASERTLARLFVSELKLSFGA 208

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ 265
           WRQQL+L  AL  + +G    +VA  LGY S  AF  MFK+  G  PGR++   + +   
Sbjct: 209 WRQQLRLARALDLIGRGRPCGEVAAELGYASPAAFSAMFKRAFGVPPGRFMQERSPLPAG 268

Query: 266 SAKPD 270
               D
Sbjct: 269 EPHND 273


>UniRef50_Q4ZYQ3 Helix-turn-helix, AraC type:Arac protein,
           arabinose-binding/dimerisation n=22 Tax=Proteobacteria
           RepID=Q4ZYQ3_PSEU2
          Length = 267

 Score =  242 bits (618), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 80/228 (35%), Positives = 116/228 (50%), Gaps = 2/228 (0%)

Query: 32  TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91
            +P H+H   Q   A+ G +        +  PPQ+ VW+P G+EH    +  AE+  L+I
Sbjct: 40  WTPPHRHDWVQFSYAISGVLGVHTAEGSFFAPPQWGVWVPAGLEHEVVTSMRAEMRSLYI 99

Query: 92  E-PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRA-EPMTRRLIQVLFDELPQQPQQQ 149
               +   P  C  L+++PL RELI +           +    RL+QVL D+L Q P+  
Sbjct: 100 RTADSGWAPQRCRVLEVTPLARELIKSFCLLPVDYPEQDSHEARLVQVLLDQLAQLPEVG 159

Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209
             LP+  HP++  +   + + P     L  WA     SE+ L RL  +ETGLSFR WRQ+
Sbjct: 160 FSLPLPRHPRLLGLCNELIEEPGRLITLHDWAARLGTSEKTLMRLFQRETGLSFRGWRQR 219

Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
            +L+ +L  L +G +V + A   GYDST+AFI  FK   G TPG    
Sbjct: 220 ARLLSSLSALEEGASVTRTALACGYDSTSAFIAAFKGLFGHTPGDLFK 267


>UniRef50_Q7W072 Probable transcriptional regulator n=3 Tax=Bordetella
           RepID=Q7W072_BORPE
          Length = 286

 Score =  242 bits (617), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 79/250 (31%), Positives = 128/250 (51%), Gaps = 5/250 (2%)

Query: 18  AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77
           AA+A    AGT    S +H+H +GQL+ A+ G +T   +   W+V P  A+WI  GV H 
Sbjct: 40  AALATDYPAGT---VSSLHRHDRGQLLYAMSGVVTVITDLGSWVVAPGQALWIAPGVLHQ 96

Query: 78  NQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136
            +   +  +  L+I+P+    +P  C T+++SPL + LIL                 +  
Sbjct: 97  TRGFESVAIRSLYIDPAHADGLPAACQTIQVSPLLQALILEAVKLPPQDAGSERAGHIRA 156

Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196
           ++ DE+       L++P+    ++  + + + + P   G+L  WA +  +S RNL RL  
Sbjct: 157 LILDEMRHVCAAPLYVPMPRDARLARICQALLRDPANAGSLDAWAAYGGLSRRNLTRLFR 216

Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
            +TG SF  WRQ++ L+ AL  L +G+ +  VA  LGY S  AF  MF++ LG +P  Y 
Sbjct: 217 AQTGASFNAWRQKVLLMEALARLSRGEQITAVALDLGYGSPGAFTAMFRRALGVSPREYF 276

Query: 257 ARLTTVSPQS 266
            R T    ++
Sbjct: 277 -RWTEAPQRA 285


>UniRef50_C1DH76 Transcriptional regulator, AraC-family n=3 Tax=Proteobacteria
           RepID=C1DH76_AZOVD
          Length = 296

 Score =  242 bits (617), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 80/254 (31%), Positives = 122/254 (48%), Gaps = 3/254 (1%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
           +PDR     VA        +   P H HR+GQL+    G +        W +PP  A W+
Sbjct: 29  DPDRSSLPVVAERYGYPKGQRI-PEHSHRRGQLMFVTSGGLRVQTRRGYWTIPPGRACWV 87

Query: 71  PGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEP 129
           P G+ H  +    AEL   ++       +P+ C  L +  L REL++   +       + 
Sbjct: 88  PCGLNHIAEYPQAAELAVAYVRTDLCEMLPSDCRVLNLGALLRELVIAAYDFGWDYGIDS 147

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
              R + VL  E+ +Q    L +P     ++R +   + + P +  +L +WA     S R
Sbjct: 148 HEARAMLVLIGEIGRQSSAPLFIPEGRDNRLRRVTAFLHRHPDDKRSLEEWASQVGASAR 207

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
            LARL   ETGLSF QWRQQL L  A++ L++G +V +VA+ LGY S  +F  MF + +G
Sbjct: 208 TLARLFRSETGLSFSQWRQQLHLTRAVEMLLEGASVTQVAYALGYASPGSFSAMFARSMG 267

Query: 250 QTPGRY-IARLTTV 262
           + P  Y  AR   +
Sbjct: 268 EPPSLYCRARHGAL 281


>UniRef50_Q15UL1 Transcriptional regulator, AraC family n=3 Tax=Alteromonadales
           RepID=Q15UL1_PSEA6
          Length = 263

 Score =  241 bits (616), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 113/257 (43%), Positives = 157/257 (61%), Gaps = 3/257 (1%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           +   +L  +E     +  VA  I    +    P+H H KGQLILALHG +TC V+  +WM
Sbjct: 7   IQWDDLQQFE--VMPQPVVA-RIEKVNNSHELPLHTHSKGQLILALHGHVTCEVQGKMWM 63

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANR 121
           VP Q A+WIP    HSN+ + +AELC +FI+P  + MP   CT  +S L +ELI   A +
Sbjct: 64  VPTQSAIWIPTHTLHSNRASDHAELCHVFIQPGELRMPDKTCTFALSVLAKELICHFAKQ 123

Query: 122 TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWA 181
                    T RL QVL D + + PQQ ++LP+ SHP +  + + +   P +   L QWA
Sbjct: 124 DQHYPHFSPTNRLAQVLIDVVSESPQQPMNLPLPSHPTVAKLAQQLLSYPDDKKTLPQWA 183

Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241
            +FAMSER LARLI +ETG++F  WR Q+ +I+A+Q L+   TVQ+V+  LGY S +AFI
Sbjct: 184 SYFAMSERTLARLIKRETGMTFGHWRAQMHVIIAVQKLMTNMTVQRVSEYLGYSSVSAFI 243

Query: 242 TMFKKGLGQTPGRYIAR 258
           TMFK  LG++P RYI +
Sbjct: 244 TMFKNILGESPKRYIKQ 260


>UniRef50_Q2RRF5 Transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria
           RepID=Q2RRF5_RHORT
          Length = 247

 Score =  241 bits (615), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 78/226 (34%), Positives = 112/226 (49%), Gaps = 3/226 (1%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE-- 92
            H H   QL+ A+ G          W+VPP  AVW+P G+ H  +     +   +++   
Sbjct: 22  PHSHPWCQLVYAIGGVTIVETPEGSWVVPPDRAVWVPAGITHCVRAARGGQNRSVYVTIE 81

Query: 93  -PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151
              A  +P  C  + +SPL RELIL    R      +    RL++VL D++   P Q LH
Sbjct: 82  AAQAAGLPKGCKVVAVSPLTRELILEFGRRPDDYDEDGADGRLVRVLLDQIAALPAQPLH 141

Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211
           LP    P+   +   +   P +   L +WA     S R LAR    + GL+F QWR +L+
Sbjct: 142 LPWPRDPRALAVARALEADPADGRPLEEWAREAGASARTLARTFRADCGLTFGQWRLRLR 201

Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           L+ AL+ L  G+ V  VA  +GYD  +AFI MF++ LG TPG Y  
Sbjct: 202 LLGALERLAAGEAVTAVAFDMGYDQPSAFIAMFRRLLGTTPGAYFR 247


>UniRef50_A4WDQ0 Transcriptional regulator, AraC family n=18 Tax=Gammaproteobacteria
           RepID=A4WDQ0_ENT38
          Length = 254

 Score =  241 bits (615), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 75/242 (30%), Positives = 122/242 (50%), Gaps = 1/242 (0%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
           +  +    H      + P HQH   QL+ +L G +        W+VPP   VW+P G +H
Sbjct: 11  QRPLVPYAHDYRHGDSEPYHQHDCAQLLHSLSGVVRVDTVAGCWVVPPGRGVWLPAGTQH 70

Query: 77  SNQVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135
           + ++T N     LFI+P A   +P +C  ++ISPL RELI+   +   +        R+ 
Sbjct: 71  AIRITGNVAARTLFIDPLARADLPASCQIVQISPLLRELIVASLDLPESYSPGSRDERVY 130

Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
           +++ DE+   P    HLP      +  + + + + P    +  Q A   +MSER L R  
Sbjct: 131 ELILDEIRTMPVLPFHLPEPQSEPLHQLCQQIRQDPGLAWSSAQAASLTSMSERTLNRHF 190

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            ++TGLS+ +W ++ +L+ AL  L +G  V +VA  LGY S +AF  MF++ +G +P  Y
Sbjct: 191 QQQTGLSYGEWTRRARLVEALLRLAQGQPVLRVALDLGYGSHSAFTAMFRRVMGISPSDY 250

Query: 256 IA 257
             
Sbjct: 251 FK 252


>UniRef50_C3K8M6 Putative AraC-family regulatory protein n=1 Tax=Pseudomonas
           fluorescens SBW25 RepID=C3K8M6_PSEFS
          Length = 265

 Score =  241 bits (614), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 126/266 (47%), Gaps = 6/266 (2%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           M      + Y+PD            +GT     P H HR+GQ   A  GA+    +   W
Sbjct: 1   MPPTFTFSPYKPDSPEAVVTLREYPSGT---VFPRHTHRRGQFAYASTGALKMFTDLGNW 57

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT---MPTTCCTLKISPLCRELILT 117
           +VPPQ A+W+PGGV H   +  +  +   +++ +A     +   C    +SPL R L+  
Sbjct: 58  VVPPQRAIWVPGGVSHEMHMRGDVVMLNTYLDDAAARRAGLQDYCQVFGVSPLLRHLLEA 117

Query: 118 LANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGAL 177
                 +         ++ +L DE+   P+  L  P+ S  ++    +     P +  ++
Sbjct: 118 ALAIGPSASPSVRDCCVLTLLIDEIGTMPELPLSAPLPSESRLARSCQRFLDAPTQKISI 177

Query: 178 GQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDST 237
           G+ A + +MS R   R   + TG++F  WRQQ+ L+ A   L  G ++  VA  LG+ S+
Sbjct: 178 GEMADWSSMSRRTFTRNFRECTGMTFVSWRQQVCLLEATARLSHGSSITDVAFELGFSSS 237

Query: 238 TAFITMFKKGLGQTPGRYIARLTTVS 263
           +AF ++F++ LG +P RY+A+    S
Sbjct: 238 SAFTSVFRRNLGDSPARYLAKSKAAS 263


>UniRef50_A6WQB9 Helix-turn-helix-domain containing protein AraC type n=4
           Tax=Shewanella baltica RepID=A6WQB9_SHEB8
          Length = 305

 Score =  240 bits (613), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 70/237 (29%), Positives = 114/237 (48%), Gaps = 7/237 (2%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
            H H  GQ+I A  G ++       ++VPP+ AVW+P  V+H        +L  L+++ +
Sbjct: 54  RHSHPWGQVIYASQGVLSVITPAGRYIVPPEQAVWVPPFVDHEVIALGQVQLSSLYLDET 113

Query: 95  AVT-MPTTCCTLKISPLCRELILTLANRT------TTQRAEPMTRRLIQVLFDELPQQPQ 147
            +   P  C  L + P+ + L+                  +    RL+ V+ D +   P+
Sbjct: 114 QIGGFPPDCTCLSVKPVLQLLLQEANALMKSEAGLIEPDDKDSVMRLLMVIRDFMVLAPK 173

Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207
             L LP     K+  + E +   P E   L  W      S R LARL  ++TGLS+ QW 
Sbjct: 174 VALDLPYPKDKKLLRITEALLADPSEQRTLVDWQREVGASARTLARLFKQQTGLSYSQWL 233

Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSP 264
           Q+L+L +A+Q L +G++V   A +LGY S +AF  MF++ +G  P +Y+    T+  
Sbjct: 234 QRLRLQVAIQMLSRGESVLTTALSLGYASGSAFGYMFRQLMGVAPSQYLLAQNTMPK 290


>UniRef50_Q2SEK4 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella
           chejuensis KCTC 2396 RepID=Q2SEK4_HAHCH
          Length = 255

 Score =  239 bits (610), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 113/243 (46%), Gaps = 2/243 (0%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
            +  +   + +   E     H H  GQL   L G      +   W++P     WIP GV 
Sbjct: 14  PQDILVRRLRSEGTE-EREGHSHEHGQLFCVLQGLTVVDTDAGRWLMPSNRLGWIPPGVR 72

Query: 76  HSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134
           H  Q         L++ P     +P   C  + + L   +I  +A  T  +  +   RRL
Sbjct: 73  HGAQYFGAIAGWSLYLHPDICEPLPDEPCVYEANALMTPVIARIAEWTAGEPLDAPRRRL 132

Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
           + VL DE+    Q  LHLP+    ++  +   +   P    +L   A    +SER L R 
Sbjct: 133 LHVLMDEIQAAQQPALHLPMPRDQRLLRLSHKLLATPENNDSLLALASDIGLSERTLTRK 192

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
             +ETGLS  QWRQ  +L  AL+ L +G +V + A  LGYDS +AFI +F++  G+TPGR
Sbjct: 193 FREETGLSLGQWRQLARLARALELLAQGVSVTQTALDLGYDSVSAFIALFRRYFGETPGR 252

Query: 255 YIA 257
           Y+ 
Sbjct: 253 YLK 255


>UniRef50_Q221Z0 Transcriptional regulator, AraC family n=9 Tax=Proteobacteria
           RepID=Q221Z0_RHOFD
          Length = 273

 Score =  239 bits (610), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 77/242 (31%), Positives = 122/242 (50%), Gaps = 1/242 (0%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
            A + F       E   P H+H  G+ + +  G +   + +  ++ PPQY +W+P  VEH
Sbjct: 21  PAPIVFRSAYVPAEGMYPQHRHAWGEFVYSFSGVMEVKLADHHYLAPPQYGIWLPPDVEH 80

Query: 77  SNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135
                  A  C L+I P     +P   C L +SPL R L+  L  +   Q       RL+
Sbjct: 81  VGLNRYEAVHCSLYIAPQGCGNLPRAACALTVSPLVRALLEHLRQQPPEQPGTLQDERLL 140

Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
           +VL D+L   P    +LP S    +  ++ M+ + P +  +L + A     +ER L R  
Sbjct: 141 RVLVDQLALAPCAGSYLPSSDDALLGAVLRMLEEQPGDNRSLPELAHAVHTTERTLMRRA 200

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            ++ G+SF +WRQ+L+++ A+  L  G TV+ +A  LGY S +AFITMFK+ +G TP  +
Sbjct: 201 RRDLGMSFVEWRQRLRVVKAMPLLEAGQTVETIALDLGYGSASAFITMFKRLVGTTPDEF 260

Query: 256 IA 257
             
Sbjct: 261 RK 262


>UniRef50_Q4K6D5 Transcriptional regulator, AraC family n=8 Tax=Pseudomonas
           RepID=Q4K6D5_PSEF5
          Length = 272

 Score =  239 bits (609), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 83/257 (32%), Positives = 127/257 (49%), Gaps = 5/257 (1%)

Query: 13  DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72
           D  H   V+       D    P+H+HR+ Q + A  G +        W++PP  AVWIP 
Sbjct: 19  DHFHHGPVSAYPRDYPDAAHQPLHRHREAQFLYAACGTMRLVTAQGAWVIPPSRAVWIPP 78

Query: 73  GVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131
            VEH   +     +  LFI+P  +      CC L ++PL RELIL    +   Q   P+ 
Sbjct: 79  LVEHEIFMVGEVRMRSLFIDPELSAPALRQCCVLAVTPLLRELILRAV-QGPEQAENPLI 137

Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191
           ++L+    +E+       LH+P+    +++ +   + + P     L  WA     S R L
Sbjct: 138 QQLM---LEEIAALENLPLHIPMPQDRRLQAICRTLIQTPDHPHTLEDWAQQVGASSRTL 194

Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251
           ARL  ++  ++F  WRQQ++L+ AL  L+ G++V  VA +LGY S  AF  MF + LG T
Sbjct: 195 ARLFQQQVQMNFNAWRQQVRLMEALPRLLAGESVHNVADSLGYGSARAFSAMFCRLLGDT 254

Query: 252 PGRYIARLTTVSPQSAK 268
           P  Y+A L  +S  +A 
Sbjct: 255 PRHYVAALNQLSAINAS 271


>UniRef50_Q47Y50 Transcriptional regulator, araC family n=1 Tax=Colwellia
           psychrerythraea 34H RepID=Q47Y50_COLP3
          Length = 268

 Score =  239 bits (609), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 64/223 (28%), Positives = 112/223 (50%), Gaps = 1/223 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H   QL  +  G +    +  ++++PP+ A+W+P G+ H +          L+ +P  
Sbjct: 45  HSHPWSQLSYSCVGVMHIETDAGIFVIPPEQALWLPPGMAHQHFCKNKVSYRSLYFDPVL 104

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
              +      L + PL + LIL ++N +        T+R + VL D L      +L +P 
Sbjct: 105 SEMLGDKVRPLTVDPLLKSLILEISNWSEDYEETEETQRFLLVLLDRLAIAKSNELFMPT 164

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
               ++  ++E + + P     + QWA     S R L RL  +  G+ F +W+Q+L+++ 
Sbjct: 165 IQDKRLFPIIETLNQEPANKLTIEQWALKVGASSRTLNRLFNQNYGMGFSRWKQKLRILK 224

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           +L+ L     +  +A  LGY+ST+AFIT FKK LG +P +Y+A
Sbjct: 225 SLELLNSNARLVDIAFELGYESTSAFITAFKKQLGCSPKKYLA 267


>UniRef50_B3RAF2 Putative Transcriptional Regulator, AraC family n=1 Tax=Cupriavidus
           taiwanensis RepID=B3RAF2_CUPTR
          Length = 265

 Score =  238 bits (608), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 76/232 (32%), Positives = 121/232 (52%), Gaps = 1/232 (0%)

Query: 24  IHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTAN 83
           I A  + +    H+H   Q   AL G +    +   ++ PPQ+AVWIP GV H  +    
Sbjct: 22  IEALPNRVLGYRHRHPWCQFAYALQGVLEVWTDRGRFVAPPQWAVWIPAGVAHRVRCATG 81

Query: 84  AELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDEL 142
             +  L+++ S      + C  L +SPL RELI   ++            RL +VL D+L
Sbjct: 82  TRIRSLYLDNSVCAAARSRCRVLTVSPLLRELIRAFSHLPAEYDERGADGRLARVLLDQL 141

Query: 143 PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202
              P+ +  LP+ + P++R +   + +      +L  W+   A+S + L RL V+ETGL+
Sbjct: 142 GAAPEVEFMLPLPADPRVRLVCNGLQRHADRDTSLAAWSMRLAISGKTLTRLFVRETGLT 201

Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
           FR WRQ+L+L+ A+  L +G+ V +VA   GY+S +AFI  F++    TPG 
Sbjct: 202 FRAWRQRLRLLDAVPRLERGEAVTEVALDCGYESLSAFIAAFRRLYNMTPGE 253


>UniRef50_A7K1S8 Transcriptional regulator AraC family protein n=4 Tax=Vibrionaceae
           RepID=A7K1S8_VIBSE
          Length = 264

 Score =  238 bits (607), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 69/224 (30%), Positives = 116/224 (51%), Gaps = 1/224 (0%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
            H H +GQL+    G I    +   W++PP  A WIP G  HS     + +   L   P 
Sbjct: 37  WHSHHRGQLLCIDEGLIQVKTDEGAWILPPHRAGWIPPGAMHSVYFCGSLKGRSLLFTPE 96

Query: 95  AV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153
           +    P   C +++S + + L +  +  + T      + R++ V+ DE+   P + LH+P
Sbjct: 97  SCERFPMRPCVIQMSDVLKALSVRASIWSKTDELSIQSLRILAVISDEIVNSPHESLHIP 156

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
           +   P+++ + + +   P    ++  WA   A+S R L RLI  E  +SF +WRQQ  LI
Sbjct: 157 LPRDPRLQKVTQAILIDPNSKHSVEHWAKIGAVSSRTLRRLIRSELNMSFSEWRQQALLI 216

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
            +L+ + +G++V  VAH LGY + + FI MF++  G +P RY +
Sbjct: 217 HSLEMMARGESVGAVAHALGYSTPSNFIAMFRRVYGDSPTRYFS 260


>UniRef50_B3QB90 Transcriptional regulator, AraC family n=3 Tax=Alphaproteobacteria
           RepID=B3QB90_RHOPT
          Length = 248

 Score =  237 bits (606), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 80/235 (34%), Positives = 122/235 (51%), Gaps = 1/235 (0%)

Query: 23  CIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTA 82
            +        S  H H + QLI A+ G ++ T  +  W+VPP  AVW+P GVEH  +  +
Sbjct: 12  VVSQDAHRFASRRHSHPQAQLIYAITGVVSVTTADGTWVVPPSRAVWVPAGVEHDTKSHS 71

Query: 83  NAELCFLFIE-PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDE 141
             +   L I+    + +P  C  ++++PL RELIL L           ++R + Q+L  E
Sbjct: 72  AVQFRSLLIDSVEVMGLPVVCMAMEVTPLLRELILRLVAIADAPGRVELSRVVTQLLLME 131

Query: 142 LPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGL 201
           L   P + L LP   HP++    + +   P    +L Q A    MS  +  RL   ETG+
Sbjct: 132 LASLPVEPLSLPTPRHPQLARFCDQIRGEPAASVSLEQAARALHMSRASFMRLFQHETGM 191

Query: 202 SFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           SF +WRQQ +L+ AL  L +G ++  VA   GYDS +AF  MF++ LG++P +Y 
Sbjct: 192 SFLRWRQQARLLHALSLLAEGQSILNVALACGYDSPSAFSAMFRRVLGKSPSQYF 246


>UniRef50_Q0KFJ5 Transcriptional regulator, AraC-family n=11 Tax=Proteobacteria
           RepID=Q0KFJ5_RALEH
          Length = 291

 Score =  237 bits (604), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 81/246 (32%), Positives = 117/246 (47%), Gaps = 2/246 (0%)

Query: 13  DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72
           DR      A         +T+P HQH   QLI A+HG +        W+VPP   +W+PG
Sbjct: 47  DRSPLPVTAMAADYLPGHVTNP-HQHPHAQLIHAVHGVMVVATTEGQWIVPPTRGMWMPG 105

Query: 73  GVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131
           G  H  ++    ++   +I P A   +P  C  L IS L RELIL   +           
Sbjct: 106 GTTHWIRMVGRVQMRTAYIRPDAAPDLPQRCTVLGISALLRELILAAIDIPLPYAPGTRG 165

Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191
            RL+++L DE+   P   LHLP  +   +R + + +   P     L  W     +  + +
Sbjct: 166 ARLMRLLLDEVMLVPSLPLHLPRPADDSLRQICDAITGAPDTALTLADWGSRLGLDPKTI 225

Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251
            R   +ETG++F QWRQQ +L+ AL+ L  G  V  VA  LGYDS +AF TMF++  G  
Sbjct: 226 QRRFARETGMTFGQWRQQARLLAALEKLAAGSKVVDVALDLGYDSPSAFATMFRRQFGVP 285

Query: 252 PGRYIA 257
           P  +  
Sbjct: 286 PSAFFR 291


>UniRef50_B5WKD5 Transcriptional regulator, AraC family n=1 Tax=Burkholderia sp.
           H160 RepID=B5WKD5_9BURK
          Length = 277

 Score =  236 bits (603), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 3/231 (1%)

Query: 29  DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88
                P H H +GQ   A  G +T       W+VPPQ AVW+P  V H  Q++    +  
Sbjct: 46  SGFVHPDHTHTRGQFAYAAEGVMTVLTTAGNWVVPPQCAVWLPADVPHEMQMSGQVRMLN 105

Query: 89  LFIEPSA---VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
            F+   A     +P  CC +  S L R+LI     +           R++ +L DE+   
Sbjct: 106 AFVHVRAKQASQLPRHCCVVSTSSLLRDLISEAVQQPALYNPTTRAGRIMALLVDEIAAM 165

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
               L+ P+ + P++  +   +   P     L + A    +S R+  RL  ++ G+SF  
Sbjct: 166 QPLALNAPLPNDPRLAALCREVLDAPSATLGLDEAASRIGLSRRSFTRLFREQLGVSFVA 225

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           WR+Q  L+ A+    +G+++ +VA+ LGY S TAF TMFK+ +G  P  Y 
Sbjct: 226 WREQACLLSAIARFARGESITRVAYDLGYSSPTAFSTMFKRVVGVAPYHYR 276


>UniRef50_B0RW44 Transcriptional regulator, AraC family n=6 Tax=Xanthomonas
           RepID=B0RW44_XANCB
          Length = 329

 Score =  236 bits (603), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 80/251 (31%), Positives = 128/251 (50%), Gaps = 8/251 (3%)

Query: 15  HHEAAVAFCIHAGTDELTSP---VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
             +  V     A    + +P    H H +GQL+    G +T   E+    +PP  A W+P
Sbjct: 65  WADGPVVVAFRADLRAVWAPETAWHAHVRGQLMYVEQGVLTVHTEHGTSSLPPGCAGWMP 124

Query: 72  GGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQ----R 126
            G +H+ ++        + + P A T +P     +++S L RE+I+  A+   ++     
Sbjct: 125 PGQQHTVELAGPLRGWGVVVRPDACTGLPARSGVIRLSGLAREVIMRAASWPLSEMLGEP 184

Query: 127 AEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAM 186
            +P  +RL  VL DEL Q P + LHLP+ +  ++  +   +   P +   L  WA +  +
Sbjct: 185 VDPARQRLAAVLLDELCQAPIEHLHLPMPADRRLLRIARQLLDTPADPRPLDVWATWGGL 244

Query: 187 SERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKK 246
           S R+L+R    ETGLSF QWRQQ +L   L+ L +G  V +VA  LGY S +AF+++F +
Sbjct: 245 SPRSLSRHFRDETGLSFAQWRQQARLAEGLRRLSQGTAVAQVADQLGYSSPSAFVSVFHR 304

Query: 247 GLGQTPGRYIA 257
             G  P RY+A
Sbjct: 305 HFGAPPARYLA 315


>UniRef50_A5FCF5 Transcriptional regulator, AraC family n=1 Tax=Flavobacterium
           johnsoniae UW101 RepID=A5FCF5_FLAJ1
          Length = 272

 Score =  236 bits (603), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 71/222 (31%), Positives = 119/222 (53%), Gaps = 1/222 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H + QLI A  G +   V N +W+V P   +WIP GVEH      +     +FI+PSA
Sbjct: 39  HSHPRAQLIYATRGVMNVVVGNNIWVVNPLQGLWIPSGVEHQVTFQKDVNYYSVFIDPSA 98

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           +  +P    +  I    ++L+  + +  T+        R+I V  DEL         LP 
Sbjct: 99  IGGLPEKSFSFDIPMFLKQLVFKIISFGTSGNLTESQLRIIYVFLDELALIVPSATFLPT 158

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
           ++  +++ +VE++         +  +A    MS R L+RL +KE G++F  WR +++L+ 
Sbjct: 159 TNDERLQKVVELLMSDVSSKQTIDYYAELSFMSSRTLSRLFIKELGMNFSDWRTRMKLLE 218

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           A++ L +  +++++A  LGY++ +AFI MFKK LG+TP  YI
Sbjct: 219 AIKRLGEKQSIKEIALDLGYETASAFIYMFKKHLGKTPSNYI 260


>UniRef50_Q13ID0 Transcriptional regulator, AraC family n=1 Tax=Burkholderia
           xenovorans LB400 RepID=Q13ID0_BURXL
          Length = 263

 Score =  236 bits (601), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 3/223 (1%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H+H   QL   L G++  T E  +W V    AVWIP GV+H   +    E   +FI+P  
Sbjct: 36  HRHNWSQLTCPLKGSMRVTTERQVWTVTSFRAVWIPPGVDHELTMVGATEFHAVFIDPQH 95

Query: 96  VTMPT-TCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
             +P   CC + +SPL REL+  L        A   +RRL  VL +E+ +  ++   L +
Sbjct: 96  SPLPANQCCVVDVSPLMRELMQWLGADYG--PATDHSRRLTDVLLEEVRRATRRTSALVL 153

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
               +++++ E + + P     LG+WA     SER LARL   E G +F  WRQQL+L  
Sbjct: 154 PGDRRLKSLCEALMEDPGSTLTLGEWAHRTGASERTLARLFQIELGTTFGAWRQQLRLSC 213

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           A+  L  G ++ ++A  LGY  + AF TMFK+  G  P RY A
Sbjct: 214 AVDLLRSGLSLSRIAADLGYADSAAFSTMFKRAFGVAPSRYHA 256


>UniRef50_A3QGH9 Transcriptional regulator, AraC family n=1 Tax=Shewanella loihica
           PV-4 RepID=A3QGH9_SHELP
          Length = 262

 Score =  236 bits (601), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 2/261 (0%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           MMHR  +                    +D      H H   QLI A  G +  + E + W
Sbjct: 1   MMHRQEIEHIPVFGSPSQLFKPVAREYSDGQLLAPHWHHAAQLIYAESGVMELSCEESFW 60

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT--MPTTCCTLKISPLCRELILTL 118
           ++ PQ A+W+P  + H  +      L  ++ +P A+         +L +SPL REL+ + 
Sbjct: 61  IISPQQALWMPAELPHRLKARGQVSLRSVYFQPDALPERFSKQPQSLVVSPLLRELMKSA 120

Query: 119 ANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALG 178
              T++ +       L+Q+L  E+    +  L LP+    +++ +   +   P     L 
Sbjct: 121 MPVTSSSQPSSREVHLMQLLMSEIGWAQEIPLKLPMPKDNRLQKICLGLLADPGNDCTLS 180

Query: 179 QWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTT 238
           QW      S R L+RL   + G SF  WRQQ ++  A+  L  G+ + +VA  +GYDS  
Sbjct: 181 QWGEIVGASPRTLSRLFQTQLGTSFAIWRQQARIFAAIPRLNLGEPIVRVAMEMGYDSAG 240

Query: 239 AFITMFKKGLGQTPGRYIARL 259
           AF + FKK +G TP  +  ++
Sbjct: 241 AFASAFKKMMGVTPSEFRTQV 261


>UniRef50_A3Y5B2 Probable transcriptional regulator n=1 Tax=Marinomonas sp. MED121
           RepID=A3Y5B2_9GAMM
          Length = 258

 Score =  235 bits (600), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 72/224 (32%), Positives = 115/224 (51%), Gaps = 2/224 (0%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
           +H H   QL+ A  G +    +N +  VPPQ A+W+P   +H  +V   A    ++  P 
Sbjct: 33  LHHHIWYQLMYASSGVLNVEYQNQIMFVPPQKAIWLPPNCDHRVRVPVGAHFHSVYFRPD 92

Query: 95  AVT-MPTTCCTLKISPLCRELILTLANRTTTQRA-EPMTRRLIQVLFDELPQQPQQQLHL 152
            VT +  T   L ++PL RELIL +   T   +  +   +RL QVL D+L  Q    L +
Sbjct: 93  TVTALGNTSKVLSVTPLVRELILAVGEMTHEDKELDDKDKRLTQVLIDQLSLQADSALSI 152

Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212
            + S  ++  +V  +   P    +L +WA    +S R + R+  KE G+ F++WRQ+++L
Sbjct: 153 LIPSDKRLAELVRQIIHTPSNGVSLEEWAQTLNLSSRTITRIFTKEVGMGFKEWRQKVRL 212

Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           + A+  L KG +V +VA  +GY S +AF   FK+     P  Y 
Sbjct: 213 LEAINLLEKGLSVTQVALEVGYQSPSAFTYAFKQVFDTNPASYF 256


>UniRef50_B1KGB7 Transcriptional regulator, AraC family n=2 Tax=Shewanella
           RepID=B1KGB7_SHEWM
          Length = 261

 Score =  235 bits (600), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 1/223 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H+H  GQ + A  G +      + ++VPP+  VW+     H     ++ EL   + + + 
Sbjct: 37  HRHTWGQFVYASRGVLAVATTVSRYIVPPEQGVWVTPNTCHEVTAISDVELTSFYFDNTV 96

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           ++  P  CC L +    + LI+   +         +  RL++++ D+L    +  L LP 
Sbjct: 97  LSGFPECCCVLNVEFFLKVLIVESKSIDGDYEWSGVDGRLLRLIRDKLIVAIKIPLQLPY 156

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
               ++  ++  +   P     L QW      S R L+RL   ETGL++ +WRQ+  + +
Sbjct: 157 PKDSRLLAILTQLQLEPSNRNNLVQWGNIVGASARTLSRLFKNETGLTYSEWRQRFNVQV 216

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           A+  L  G+TV  ++  LGY+S ++FI MF+K  G TPG Y  
Sbjct: 217 AITKLSSGETVSNISLNLGYESPSSFIYMFRKLTGVTPGFYSQ 259


>UniRef50_B4EJY3 AraC family regulatory protein n=10 Tax=Burkholderia
           RepID=B4EJY3_BURCJ
          Length = 279

 Score =  234 bits (598), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 2/233 (0%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
               +   H H   QL+ A  G +  T  +   ++PP YA+WIP  V H+          
Sbjct: 38  PGNASVDAHSHPWAQLMYATSGVLEVTTPSGRQLLPPHYAMWIPPHVPHAVSTRDCVAFH 97

Query: 88  FLFIEPSAV--TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
            L+++ +     +   C  L ++PL REL++                 L+ ++ D + + 
Sbjct: 98  SLYLDEAIARRDVNDDCTILCMTPLLRELMIATGELPVNYDEAGPDGALVCLIADRIARM 157

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
               L +P+   P++  +   +   P +  +L +W      + R L+RL  ++TGLSF +
Sbjct: 158 QPAPLTVPLPRDPRLLKIARALHAAPGDTRSLDEWGRQVGATRRTLSRLFRQDTGLSFTE 217

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           WRQ ++L+ +L  L  G  +  VA  LGYDST++FI +F      TPG Y  R
Sbjct: 218 WRQAVRLLASLPLLDAGAPIGTVAAQLGYDSTSSFIALFHAKFRVTPGAYAKR 270


>UniRef50_A0NPK3 Probable transcriptional regulator protein, AraC family protein n=2
           Tax=Rhodobacteraceae RepID=A0NPK3_9RHOB
          Length = 262

 Score =  234 bits (597), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 74/241 (30%), Positives = 120/241 (49%), Gaps = 1/241 (0%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
            A +            +  H H   QL   + G+I    E   + VPP+ AVW+P  V H
Sbjct: 16  AAPIIGYARTQLQGRNNGWHSHDAAQLFHVIRGSIAIDTEMGTYFVPPERAVWLPPRVSH 75

Query: 77  SNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135
             +   + EL +++++      +P T   ++++ L R LIL   +   ++  +    R+ 
Sbjct: 76  QTRYLTDTELRYIYVQYDYTRDLPKTPQVMQVTTLLRALILEFMSYPRSETDKGPAARIA 135

Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
            V+ D+L   P   L LP+    ++R + E + + P    +L + A   A S R+  R I
Sbjct: 136 AVILDQLKMLPVAPLQLPMPQDARLRDLCEGVVRCPAHIPSLSEAADRCATSVRSFERRI 195

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
             ETGLS+R W +Q++L  AL+ L  G +V  V+H LGY+  +AF++ FKK  G TPGRY
Sbjct: 196 KAETGLSYRTWCRQVKLFRALELLASGRSVSDVSHKLGYEGPSAFVSTFKKAFGVTPGRY 255

Query: 256 I 256
            
Sbjct: 256 F 256


>UniRef50_D1P6X5 Transcriptional regulator, AraC family n=1 Tax=Providencia
           rustigianii DSM 4541 RepID=D1P6X5_9ENTR
          Length = 276

 Score =  232 bits (593), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 75/263 (28%), Positives = 117/263 (44%), Gaps = 3/263 (1%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
            H  N++    D      +A       + L S  H+HR+ Q +    G I  +  +  W+
Sbjct: 10  THMRNISLNTIDAVPRDVLAIGTDYPPNVLLS-AHEHRRAQFLYGATGLIEVSTADGEWV 68

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLAN 120
           +PP   VWIP    H  ++  N     L+IEP+ A      C  L++S L R+L+L   +
Sbjct: 69  IPPDCGVWIPAQTLHETRML-NVSTRSLYIEPTVAPRQSRKCEVLRVSRLLRQLLLEAVD 127

Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180
                        LIQ++  E+ +        P+     + T+       P       +W
Sbjct: 128 IPLEYDLHGREGILIQLILHEVARAKPLPFFAPIPRDTHLATLCREFLTAPHITSLPQEW 187

Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240
           A     SER+ +R    +TGLSF  WRQQ  L+ A+  +  G ++ +VA  LGY +  +F
Sbjct: 188 AKKLHKSERSFSRFFSAQTGLSFSNWRQQACLLNAITNISAGKSITEVAFDLGYCNVGSF 247

Query: 241 ITMFKKGLGQTPGRYIARLTTVS 263
            TMFKK LGQ P  +I ++   S
Sbjct: 248 STMFKKWLGQPPSSFIQQIDESS 270


>UniRef50_Q39NN6 Transcriptional regulator, AraC family n=9 Tax=Betaproteobacteria
           RepID=Q39NN6_BURS3
          Length = 266

 Score =  232 bits (591), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 83/250 (33%), Positives = 134/250 (53%), Gaps = 4/250 (1%)

Query: 9   GYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAV 68
            +E      +A+A     GT   +   H+HR+ QL+ A+ G +    E A W+VPP   V
Sbjct: 20  PFESTPMPVSAMAATYAHGT---SIAPHRHRRAQLLYAIEGVMHVQSEGASWVVPPTRGV 76

Query: 69  WIPGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRA 127
           W+  G++H+ Q++ + ++  +F+EP AV  +P   C +++ PL RELIL   +       
Sbjct: 77  WLEAGLDHTVQMSGDVQMRTVFVEPGAVEHLPARSCVVEVHPLLRELILAAVDVPLDYAP 136

Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187
                 L+ +L  E+   P   L+LP    P++RT+ + +   P +   + +WA    +S
Sbjct: 137 GSRHDHLMHLLLAEVTVAPLLPLYLPWPHDPRLRTICDALVAAPDDLRTIAEWADLLGLS 196

Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247
            R L R   +ETGLSFR+WR+Q +L++AL+ L  G+ V  VA   GY S +AF  MFK+ 
Sbjct: 197 VRTLHRAFRRETGLSFRRWREQARLLLALKRLAHGEKVLTVAMDHGYSSQSAFSAMFKRH 256

Query: 248 LGQTPGRYIA 257
            G +P  + A
Sbjct: 257 FGVSPSAFYA 266


>UniRef50_A3D530 Transcriptional regulator, AraC family n=12 Tax=Gammaproteobacteria
           RepID=A3D530_SHEB5
          Length = 283

 Score =  232 bits (591), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 81/270 (30%), Positives = 125/270 (46%), Gaps = 3/270 (1%)

Query: 4   RLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63
            L  +           V         E     H H +GQL+ A  G +    ENA+W+VP
Sbjct: 10  LLTPSDVAFITDANRPVLTHTRNMAAEAGIEPHSHPRGQLLWAAKGLLRVRSENAVWVVP 69

Query: 64  PQYAVWIPGGVEHSNQVTANAELCFLFIEP--SAVTMPTTCCTLKISPLCRELILTLANR 121
             +AVWIP  + H      +A    ++I+P     ++ T    + ++ L REL+L L   
Sbjct: 70  STHAVWIPCNLPHQVNSETHAHTRNIYIDPSYDVRSLDTQVVMVTMTALMRELVLKLCES 129

Query: 122 TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWA 181
           +    +     RL  V  DEL        HLP  S P++  +++ + + P     L + A
Sbjct: 130 SHLMNS-GQLHRLGLVAIDELETLDSLDAHLPAGSDPRLSRLIQKLIRHPTVNYTLTELA 188

Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241
                S R + RL   ETGL++RQWRQ+ +L+ +L+ L +G++  +VAH+LGY S ++F 
Sbjct: 189 EMGGASVRTIERLFKAETGLTYRQWRQRFRLLNSLESLSQGESTTRVAHSLGYLSVSSFS 248

Query: 242 TMFKKGLGQTPGRYIARLTTVSPQSAKPDP 271
             FK   G TP  Y       S  +  PDP
Sbjct: 249 AAFKMQFGCTPQDYPQHKPMKSKVNWFPDP 278


>UniRef50_B4SQ42 Transcriptional regulator, AraC family n=5 Tax=Xanthomonadaceae
           RepID=B4SQ42_STRM5
          Length = 293

 Score =  231 bits (590), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 1/272 (0%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           ++    L+ +E +                      H H++ QLI    G +T    +  W
Sbjct: 13  LLRDDALDWFERNDGPPVVAFRFDSPQGLVREVDWHHHQRAQLICVERGLLTTRTSHGTW 72

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLA 119
            + P  A W+P    H+  +        + +   A     +  C L +S L + L   + 
Sbjct: 73  SLAPGSAGWMPPLEPHTVTLDGPLRGWGMALAAPACAALPSDPCVLGLSKLAQALADRIC 132

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
                    P  + +I VL DE+   P+Q++HLP+    ++  +   +   P +  +L +
Sbjct: 133 EWPLGYATTPERQHIIDVLLDEIRTAPRQRMHLPMPHDRRLLKIASQLLADPSDERSLAE 192

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
           WA +  +S R+L R    ET LSF QWRQQ +L  AL+ L  G +V  +AH LG+ S +A
Sbjct: 193 WAHWAGLSPRSLTRHFRDETTLSFAQWRQQARLSEALRQLTDGRSVADIAHALGFSSASA 252

Query: 240 FITMFKKGLGQTPGRYIARLTTVSPQSAKPDP 271
           F+T+F++  G  PGRY+AR          P  
Sbjct: 253 FVTVFRRHFGLPPGRYLARAGHGLETGLDPAR 284


>UniRef50_Q2BIT2 Transcriptional regulator, AraC family protein n=1
           Tax=Neptuniibacter caesariensis RepID=Q2BIT2_9GAMM
          Length = 262

 Score =  231 bits (589), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 75/243 (30%), Positives = 119/243 (48%), Gaps = 3/243 (1%)

Query: 19  AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78
            + + + +  ++   P   H  G+ + +  G +    E   + VPP + +W P G EH  
Sbjct: 19  PIYYFLRSMPEDTIYPAQTHPWGEFVFSFSGVLELHAEEQEFRVPPNFGLWHPAGTEHQG 78

Query: 79  QVTANAELCFLFIEPSAVT---MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135
                +E C L+I+    T   MP T C L +SP+ RE+++ L N            RL+
Sbjct: 79  GNRNASEHCSLYIDDELATKRGMPKTSCALLVSPMLREMLIHLRNHFPKPPYTEQESRLL 138

Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
            V+ D+L   P    +LP S  P I  ++  +   P    ++   A  F MSER LAR  
Sbjct: 139 DVILDQLIVTPIAGNYLPDSKDPLITQVLAYLKDDPGANHSIRAIAEQFGMSERTLARKA 198

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
             E  +   +WRQ+L+++ A+  L +G +V+ VA  LGY + +AFI MFK+ LG TP  Y
Sbjct: 199 QSELNMPLSEWRQRLKVVRAVPMLQEGTSVESVALDLGYSTASAFIAMFKRLLGTTPDEY 258

Query: 256 IAR 258
             +
Sbjct: 259 RKK 261


>UniRef50_Q1ZB18 Transcriptional Regulator, AraC family protein n=1
           Tax=Photobacterium profundum 3TCK RepID=Q1ZB18_PHOPR
          Length = 259

 Score =  231 bits (589), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 75/243 (30%), Positives = 118/243 (48%), Gaps = 2/243 (0%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
                A   +       +  H H  GQ   A+ G +        ++ PPQYA+W+P GVE
Sbjct: 17  PRPVYARSENWDHSGTQTLWHSHAWGQWSYAIKGVLVVHTHAGRFVAPPQYAIWVPEGVE 76

Query: 76  HSNQVTANAELCFLFIEPSAV--TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRR 133
           H    +  A++  L+I   ++        C  ++S L +ELIL      +  +      R
Sbjct: 77  HQVISSGAAQMRSLYIRTGSLINLCWHNACVCEVSSLAKELILRFGCFDSEYKLNGKENR 136

Query: 134 LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193
           L  VL D L   PQ Q  LP+ S  ++  + + +     E   + Q      +S R+++R
Sbjct: 137 LANVLLDTLDDLPQAQTQLPMPSDKRLLAIFDYLQVHTGEQINIDQIGHKVGLSGRSVSR 196

Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253
           L  +ETGL+F+QWRQ+L+L+ AL  L +   V +VA   GY+S +AF+  F K  G+TPG
Sbjct: 197 LFKQETGLTFQQWRQRLRLLSALNLLEQAMPVTQVAMECGYESLSAFVAAFGKQFGETPG 256

Query: 254 RYI 256
           +Y 
Sbjct: 257 KYF 259


>UniRef50_C6RQZ7 Transcriptional regulator, AraC family n=1 Tax=Acinetobacter
           radioresistens SK82 RepID=C6RQZ7_ACIRA
          Length = 254

 Score =  231 bits (588), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 1/241 (0%)

Query: 19  AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78
            V     + TD      H+H + QL+  L G I       +W++PP   +WIP    HS 
Sbjct: 11  PVYAYAQSYTDGYVEGTHRHDRIQLLHTLSGVIHVRTSEGIWVIPPSKGIWIPENKRHSI 70

Query: 79  QVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137
           ++  N E   +F++P +     T C  + I  L  ELI                 RL+++
Sbjct: 71  KIFGNVEARGIFVDPFARADFNTQCSVVAIPKLLSELINQAVQIKEEILPHTRNERLLEL 130

Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197
           + DEL    +    LP +    ++ + E +         L   A   A++ + L+RL  K
Sbjct: 131 ILDELRFLEEIPFRLPEAKSEILKEICENIKADLSATNHLEMVAKQHALNSKTLSRLFQK 190

Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           E  ++F  W +Q +L+ AL  L     +  +A  LGY+S +AF  MFK+ +G TP  YI 
Sbjct: 191 ELNMNFSVWLKQAKLLQALTDLEMRKPILNIALDLGYESPSAFSYMFKRQMGMTPTEYIK 250

Query: 258 R 258
           R
Sbjct: 251 R 251


>UniRef50_B1TGD6 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria
           RepID=B1TGD6_9BURK
          Length = 261

 Score =  231 bits (588), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 78/253 (30%), Positives = 124/253 (49%), Gaps = 5/253 (1%)

Query: 7   LNGYEPDRHHEAAVAFC----IHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMV 62
           +  YEP+   +   A C    I   + E  S  H H++ QL+    GA+T      +  +
Sbjct: 1   MAHYEPNHVLDLDAASCPIVGIAYESREHDSQWHAHQRTQLLYLTEGAVTLQTAERIGHL 60

Query: 63  PPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANR 121
            P  A+W+P GV H   +        L+ +      +P     +++S L RELI+ +   
Sbjct: 61  APLQAIWLPEGVRHRAVMHGRFAYRSLYFDVQTYRDLPRAAVIIEVSQLLRELIVRVTEW 120

Query: 122 TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWA 181
                      RL+ VL DEL   P   L+LP+    ++  +   +   P E   L +WA
Sbjct: 121 PIDDALTDARTRLVSVLLDELEAAPASPLYLPMPRDRRLGAIANALVDDPSEQRTLDEWA 180

Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241
                S R LARL V+ETGL++ QWR + +L++A   L +G ++ +VAH +GY S +AFI
Sbjct: 181 DRVGASARTLARLFVRETGLTYVQWRTRCRLLVAQTRLAEGASITEVAHAVGYASDSAFI 240

Query: 242 TMFKKGLGQTPGR 254
            M+++  G+ PGR
Sbjct: 241 AMYRRLYGEPPGR 253


>UniRef50_B9R0N9 Transcriptional regulator, AraC family protein n=1 Tax=Labrenzia
           alexandrii DFL-11 RepID=B9R0N9_9RHOB
          Length = 279

 Score =  230 bits (587), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 73/252 (28%), Positives = 121/252 (48%), Gaps = 1/252 (0%)

Query: 6   NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65
            L+ +         + +          +  H H   QL   + G+I    E   +  PP+
Sbjct: 23  ELSEFPDHEVRAKIIGYANSQSAGRGHNGWHSHDSAQLFHVVKGSIAIDTEVGTFFAPPE 82

Query: 66  YAVWIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTT 124
            AVW+P  + H  +   + E+ F+++    A  +P T   ++++ L R LIL   +    
Sbjct: 83  RAVWLPPRIAHETRYLTDTEIRFVYVNYDHAQDLPKTAQVIQVTTLLRALILEFMSYPRA 142

Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184
           +  +    R+  V+ D+L   P   L LP+   PK+R + + + + P    AL   A   
Sbjct: 143 ETIDGPAGRIADVILDQLKMLPAAPLQLPMPQDPKLRDLCDGLVRCPAHVPALADAAARS 202

Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244
           AMS R+  R I  ETG+++R W +Q++L  AL+ L  G +V  V+H LGY+  +AF+  F
Sbjct: 203 AMSVRSFERRIKAETGMNYRTWCRQVKLFRALELLAAGRSVSDVSHKLGYEGPSAFVATF 262

Query: 245 KKGLGQTPGRYI 256
           +K  G TPGRY 
Sbjct: 263 RKAFGVTPGRYF 274


>UniRef50_A5V470 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas
           wittichii RW1 RepID=A5V470_SPHWW
          Length = 261

 Score =  230 bits (587), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 72/244 (29%), Positives = 110/244 (45%), Gaps = 1/244 (0%)

Query: 15  HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGV 74
           H +  +    +          H+HR+GQLI A  G +  +    +W+ PP+ AVW PGGV
Sbjct: 11  HVDRPIVAVGNEYPPAFELDWHRHRRGQLIYAARGVVVVSTAQGVWVAPPERAVWTPGGV 70

Query: 75  EHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRR 133
            H+ ++        + IEP A  ++      +++SPL R L+                  
Sbjct: 71  SHAVRMVGAVSTRSVLIEPDAHGSLGDANKVIQVSPLLRSLLAAACEIDPEYDVAGRDGM 130

Query: 134 LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193
           ++ +L  EL + P   L +P     +I    +     P     +  W+    M  R   R
Sbjct: 131 VMALLLAELARAPSVSLAVPFPKKAEIARKCQAFLDAPSPHDTIDMWSAELGMGRRAFTR 190

Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253
           L  ++TGLSF  WRQQ  L++AL  L  G+ V  +A  LGY+S  AF TMFK+  G  P 
Sbjct: 191 LFRQQTGLSFGAWRQQACLLIALPRLAAGEAVTTIALDLGYESPAAFTTMFKRLAGVAPS 250

Query: 254 RYIA 257
            Y +
Sbjct: 251 HYQS 254


>UniRef50_A9ISK4 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria
           RepID=A9ISK4_BORPD
          Length = 393

 Score =  230 bits (587), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 81/254 (31%), Positives = 127/254 (50%), Gaps = 3/254 (1%)

Query: 18  AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77
             +     +G     + +H H +GQL+ +L G ++    + LW+VP   A+WIP G+ H+
Sbjct: 138 PPLIAVAASGPRPRATGMHHHARGQLLGSLRGLLSVGTGDGLWVVPAAQAIWIPPGMPHN 197

Query: 78  NQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136
            +          ++ P A   +P   C +  S L R  +L  A      R+E    RL  
Sbjct: 198 LRSHGPFAGWSAYLAPQACAGLPDAVCAMPCSELLRATVLRAAA--GNSRSEAANERLAG 255

Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196
           V+ DE+   P+    LP+   P++  + + +A  P     L  WA + AM+ R L R   
Sbjct: 256 VILDEIHALPRSAPGLPMPRDPRLLRIAQALADEPGNPRRLEDWARWAAMAPRTLMRRHQ 315

Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           +ETGL F  WRQ+L+L+ AL+ L  G  V  VA  LGYD+ +AFI MF++  G TP RY 
Sbjct: 316 QETGLPFGDWRQRLRLMRALEMLAAGRPVTTVALDLGYDNVSAFIAMFRRAYGTTPARYF 375

Query: 257 ARLTTVSPQSAKPD 270
            +   + P ++ P+
Sbjct: 376 DQSRPLPPGASAPE 389


>UniRef50_Q11FA3 Transcriptional regulator, AraC family n=1 Tax=Chelativorans sp.
           BNC1 RepID=Q11FA3_MESSB
          Length = 258

 Score =  230 bits (587), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 71/240 (29%), Positives = 112/240 (46%), Gaps = 1/240 (0%)

Query: 20  VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79
           V             P+H H   Q + A  G +  T+E A +++ P+ A+WIP GV H+  
Sbjct: 19  VFLRSQKLPARHGFPMHTHPWNQFVYATTGTLMVTIEQARYVITPEQAIWIPTGVRHTTT 78

Query: 80  VTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL 138
             ++ E   L++E    + MP  C  L +S L R LIL LA              L  V+
Sbjct: 79  ALSDVEFRNLYVEDLPNLNMPADCSVLAVSTLLRSLILELAEVEQKSDHSEYRDHLDAVI 138

Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198
             ++ +  +    LP      +R + E++   P E   + +WA    MS R L+R    E
Sbjct: 139 LVQMSRLRKLDFFLPWPHSSHLREICEVLYAHPDEPRDITEWASRAGMSARTLSRHFNAE 198

Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           TG+S R WR +L++  A++ L     V  +A  LG+ S +AF   F+  +G +P  +IAR
Sbjct: 199 TGMSLRVWRHRLRVFRAVELLSAHWRVTDIALELGFSSASAFTYAFRTEMGCSPTEWIAR 258


>UniRef50_Q2K0F2 Probable transcriptional regulator protein, AraC family n=6
           Tax=Rhizobium etli RepID=Q2K0F2_RHIEC
          Length = 278

 Score =  229 bits (585), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 75/233 (32%), Positives = 113/233 (48%), Gaps = 1/233 (0%)

Query: 26  AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85
           A     T   H H + QL   + G++    E   ++VPP+ AV++P GV H        E
Sbjct: 30  AEPAGRTYSFHAHHRAQLFQIVRGSLRLETERGYFIVPPERAVFVPSGVLHEVTYLQETE 89

Query: 86  LCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ 144
             +LF  P AV  +P+    +  +PL RE IL                RL+ V+ D+L  
Sbjct: 90  RSYLFFRPDAVVNLPSQVSVIGTTPLLRETILAFLEIPRADAGSARAERLVAVILDQLQT 149

Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204
            P   L LP  +  ++R++   +   P     L + A   AMS R+  R    ETG+SFR
Sbjct: 150 SPVAPLSLPSPASERLRSIASDIRNEPGADWPLDELASRAAMSPRSFQRHFHTETGMSFR 209

Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
            WRQQ +L+ A++ L  G +V  +A +LGY   +AFI +F+   G +PG+Y  
Sbjct: 210 AWRQQAKLLKAVEWLAAGRSVGDIAFSLGYSGPSAFIAVFRTAFGVSPGQYFQ 262


>UniRef50_A3RTS8 Transcriptional regulator, AraC family n=4 Tax=Ralstonia
           solanacearum RepID=A3RTS8_RALSO
          Length = 365

 Score =  229 bits (584), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 74/226 (32%), Positives = 112/226 (49%), Gaps = 3/226 (1%)

Query: 34  PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93
           P H H   Q+  +  G +     +  W+VPP  A+WIP G+ H   V   A L  L+I+P
Sbjct: 134 PRHTHAWAQVAYSHTGVLRVQAGDTAWVVPPSRAIWIPPGIVHEVWVVEAAFLRTLYIDP 193

Query: 94  SAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152
           S VT     C  +++SPL RELI  +  R     A    + L  ++ DEL +     L L
Sbjct: 194 SVVTDALAQCRVMEVSPLLRELIAAMDVRRPLAPA--REQALATLILDELRRSAPLPLDL 251

Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212
           P+ +  ++R + E +   P         A     S R LAR    E G++F QWRQQ  L
Sbjct: 252 PMPADKRLRALCERVMADPGTPLTFDALAREVGASTRTLARRFRDELGVNFSQWRQQAVL 311

Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
             A+  + +G  + ++A  LGY+S +AF  MF++  GQ+P  ++ R
Sbjct: 312 ASAIPLMSQGLPLSRIAQELGYNSQSAFSAMFRRAFGQSPSAFLHR 357


>UniRef50_B1JZJ0 Transcriptional regulator, AraC family n=2 Tax=Burkholderia
           cenocepacia RepID=B1JZJ0_BURCC
          Length = 261

 Score =  228 bits (582), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 78/244 (31%), Positives = 115/244 (47%), Gaps = 3/244 (1%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
                A  ++    E  +  HQHR GQL+ A  G +        W +PP  AVW+P  V+
Sbjct: 17  PRQVAATLVNYRQGERVT-WHQHRHGQLVFAAKGVVRVLTPARTWTLPPSRAVWLPSDVD 75

Query: 76  HSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134
           H      +  LC +++EP     P      + +S L REL LT+ +   T  A       
Sbjct: 76  HELHAVGDTALCSVYMEPEVFPWPWEEPAVIAVSALLRELALTVVDGADTYTATSRAGLA 135

Query: 135 IQVLFDELPQQPQQQL-HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193
             +L   L + P      +P+    ++  + E M   P     L  W   F  S R LAR
Sbjct: 136 ASLLMKVLAETPSLAEPGVPLPRDERLLKLCEHMMNDPASDLTLDFWGEQFGASGRTLAR 195

Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253
            +  ETGL+F  WRQQ+++  A+  L  G +V +VA  LGY S +AFI MF++  G++P 
Sbjct: 196 RLHAETGLTFVAWRQQMRVAEAMTRLALGQSVARVAKDLGYRSASAFIVMFRRITGESPQ 255

Query: 254 RYIA 257
           RY+A
Sbjct: 256 RYLA 259


>UniRef50_Q3JQZ2 Transcriptional regulator, AraC family n=59 Tax=Burkholderiales
           RepID=Q3JQZ2_BURP1
          Length = 450

 Score =  228 bits (582), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 81/256 (31%), Positives = 125/256 (48%), Gaps = 8/256 (3%)

Query: 5   LNLNGYEPDR-HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63
              + + P R H     A  I AG      P H H   QL  A  G +      + WMVP
Sbjct: 180 DVPSEFAPTRSHPMRVRARAIAAGMR---VPPHAHAWAQLAYASRGVLRLATAGSTWMVP 236

Query: 64  PQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRT 122
           P  A+W+P  + H   +  +A L  L+++ SAV      C  +++S L RELI+ L  R+
Sbjct: 237 PSRAIWVPPRIAHEVVIVEDAYLRTLYVDESAVPGGLDACRVVEVSGLLRELIVALEARS 296

Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182
             +      R L +++ DEL +     L +P+ +  ++R + E +   P +  +L  WA 
Sbjct: 297 LNRT---RERLLAELVLDELTRAEPLPLAVPMPTEKRLRALCEAVLAHPAQGESLEHWAA 353

Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242
               S R +ARL  +E  +SF QWRQQ  L  A+  L +G  +  +A+ LGY S +AF  
Sbjct: 354 GVGASTRTIARLFKQELSVSFSQWRQQALLARAIPLLNQGRPLSHIANELGYQSQSAFSA 413

Query: 243 MFKKGLGQTPGRYIAR 258
           MF++  G +P  +I R
Sbjct: 414 MFRRAFGASPRAFIQR 429


>UniRef50_A9IA98 Transcriptional regulator, AraC family n=1 Tax=Bordetella petrii
           DSM 12804 RepID=A9IA98_BORPD
          Length = 243

 Score =  228 bits (582), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 2/229 (0%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
            H H +GQL+ A  G +        W + P+ A+WI  GV+H   +     + +L IEP 
Sbjct: 15  WHSHEQGQLVHATSGVVRVLTSQGGWTLAPRQALWIAPGVDHELHMIGQVAMRWLRIEPD 74

Query: 95  AVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ-QQLHL 152
           A   +   C  ++++PL RELIL +         E     ++ +L  +L +        L
Sbjct: 75  AAPWLWAECRQIRVTPLLRELILKMLQDPPVYPPESNAAMIVPLLLRQLQEAEVIVHGKL 134

Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212
           P+    ++  + E++ + P     +         S R L+RL  ++TGL+F QWRQQL+L
Sbjct: 135 PLPRDKRLLKVCEVLIRSPANNDPMALLGERAGTSVRTLSRLFKEQTGLTFVQWRQQLRL 194

Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTT 261
             A+  L  G +V  VA  +GY +  AF TMF++ LG TP RY+    +
Sbjct: 195 SEAVCQLSLGQSVSSVAQDMGYATANAFSTMFRRTLGATPQRYMRETRS 243


>UniRef50_A1TK09 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria
           RepID=A1TK09_ACIAC
          Length = 276

 Score =  228 bits (581), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 78/239 (32%), Positives = 118/239 (49%), Gaps = 1/239 (0%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
            +    P  QH  GQ +    G I  TV++  +  PP + VW+P G EH  +        
Sbjct: 37  PEGADFPTEQHPWGQFVYPRAGVIELTVKSNRYAAPPDFGVWLPPGTEHVARADGETSYF 96

Query: 88  FLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146
            L I+      +P     L +S + + + L L  R   +   P   RL++VL D+L    
Sbjct: 97  VLDIDADLCARLPRRASVLSVSAIAKAVFLDLQKRQVRKPQSPEDVRLMEVLIDQLSASV 156

Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206
                LP+SS   +R ++E + K P +   L +WA +   +ER LAR   ++ G++F +W
Sbjct: 157 PVDSFLPMSSDAALRNVLEALCKNPGDSRTLVEWARYVHSTERTLARRCTRDLGMTFLEW 216

Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ 265
           RQ+L+L  A   L  G  VQ VA  LGY +T+AFI MF+K +G TP  +  RL   + Q
Sbjct: 217 RQRLRLSRAFAMLADGLAVQVVAQQLGYGTTSAFIAMFQKTIGTTPNTFRGRLRDGAEQ 275


>UniRef50_B7GXZ6 Bacterial regulatory helix-turn-helix protein, AraC family protein
           n=12 Tax=Acinetobacter RepID=B7GXZ6_ACIB3
          Length = 262

 Score =  228 bits (581), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 69/234 (29%), Positives = 120/234 (51%), Gaps = 6/234 (2%)

Query: 30  ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89
              +P H H + Q + A  G I     N +W+VPP  A+WIP  VEHS    ++ +L   
Sbjct: 24  REITPTHTHTRAQFLYASTGNIQVFTPNHVWIVPPMCALWIPANVEHSVISLSHVKLNTA 83

Query: 90  FIEP-SAVTMPTTCCTLKISPLCRELILTLANR-----TTTQRAEPMTRRLIQVLFDELP 143
            +E  +A  M   C  +++S L  EL++ L          T  ++ ++R L  ++F+E+ 
Sbjct: 84  LVEVNAAARMGQHCFIIRVSNLLHELLIRLNEIEREETPNTATSQELSRSLQILIFEEIQ 143

Query: 144 QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203
           +     + +P     ++  + + +   P     L  WA     S R L R+  KETGLS+
Sbjct: 144 RANLLPIQIPWPKDKRLLKICQELLHTPNHSRDLTDWADDIGASSRTLMRMFQKETGLSY 203

Query: 204 RQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           R W QQ+ + +AL  +  G ++ +++ +LGY + +AF  MFK+ LG+TP ++ +
Sbjct: 204 RAWVQQMHIALALSKIANGKSIAQISESLGYTNPSAFSAMFKRHLGKTPQQFRS 257


>UniRef50_C4XL68 AraC family transcriptional regulator n=2 Tax=Desulfovibrio
           RepID=C4XL68_DESMR
          Length = 350

 Score =  227 bits (579), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 74/224 (33%), Positives = 105/224 (46%), Gaps = 1/224 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H  GQL  A  G I  T   +  + PP+ AVW+P G+ H    T  A +  L+I    
Sbjct: 33  HSHPFGQLSYAGEGVIEVTTPVSSHVAPPRRAVWVPPGLLHEVTTTRPAAMRSLYIRADQ 92

Query: 96  VTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
               P  C  L+++ L RELIL  A        +    RL +VL D+L   P+  L LP 
Sbjct: 93  TIFCPPRCLVLRVTRLARELILAAAALPPAYDEDGSAGRLARVLLDQLAGLPEADLSLPW 152

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
            + P +  +   +   P +   +   A    MS R LAR    +TGL F  WR++ +L+ 
Sbjct: 153 PADPALAALCRELRDAPDDGRDMDALARQAGMSGRTLARRFEAQTGLRFGAWRRRQRLLA 212

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           AL  L  GD V   A   GY S +AF+  F+   G TPG ++ +
Sbjct: 213 ALGRLEAGDNVTTAALESGYASVSAFVAAFRDMFGATPGAFLRQ 256


>UniRef50_B7GW45 Bacterial regulatory helix-turn-helix protein, AraC family protein
           n=13 Tax=Acinetobacter RepID=B7GW45_ACIB3
          Length = 264

 Score =  227 bits (579), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 72/237 (30%), Positives = 115/237 (48%), Gaps = 2/237 (0%)

Query: 22  FCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT 81
           F +     E   P H H  G+ I A  G +   ++   ++ PP Y +W+P   +HS    
Sbjct: 26  FRVRNAPAETVYPQHAHAWGEFIYAFSGVLEVNIDQINYLTPPPYGIWLPPYTKHSGINR 85

Query: 82  ANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFD 140
                  L++  S    +P     L  SPL   L+  L         +    RL+QVL D
Sbjct: 86  NEVTHATLYVHESLCQKLPQKAGILLTSPLVPALLDHLRQNPQ-DETQVEYIRLLQVLLD 144

Query: 141 ELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETG 200
           +L Q      +LP + HP +  ++  + + P +   L + A    M+ER LAR   KE G
Sbjct: 145 QLIQAELVGSYLPTTDHPALAKILNDLHQCPADNSTLQELAERINMTERTLARYSQKELG 204

Query: 201 LSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           +S  +WRQ+L+++ A+  L +G T++ +A  LGY S +AFI MFK+ +G TP ++  
Sbjct: 205 MSLHEWRQRLKVMKAMTMLNQGKTIESIAFDLGYASASAFIYMFKRWMGFTPDQFRK 261


>UniRef50_B6ELX6 HTH-type transcriptional regulator, AraC family n=1 Tax=Aliivibrio
           salmonicida LFI1238 RepID=B6ELX6_ALISL
          Length = 275

 Score =  227 bits (578), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 69/248 (27%), Positives = 118/248 (47%), Gaps = 4/248 (1%)

Query: 22  FCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT 81
           F I A T+ L    H +  GQL L   G +   V+    + P  Y +W P   +H     
Sbjct: 30  FFIEAKTETL---PHSYSWGQLHLIKQGVLEMEVDQQKMVCPANYTIWTPPHQKHRAFNR 86

Query: 82  ANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFD 140
           ++ E C + I        P   C + ++PL R +I  L  R TT  +    + L  VL D
Sbjct: 87  SDIEYCAINITAELSEKFPKHACMIPLTPLLRAIIDDLIERKTTMVSSEEDKCLSYVLMD 146

Query: 141 ELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETG 200
            L +    +++LP +    +  ++  + + P +  +L  WA     +ER LAR   KE  
Sbjct: 147 RLVKINPIEIYLPSTQDKLLAPILTQLEETPEDDSSLSVWAKRVFSTERTLARRFQKELK 206

Query: 201 LSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260
           +SF  WRQ+ +L+ A+  L +  ++ ++A+ LGY   ++FI MF+K  G TP ++  +  
Sbjct: 207 MSFNDWRQRAKLVKAMTLLKESISINEIAYQLGYSQGSSFIKMFRKHTGVTPEQFRKQNE 266

Query: 261 TVSPQSAK 268
           T++ +   
Sbjct: 267 TLTVEITS 274


>UniRef50_B2I1A9 AraC-type DNA-binding domain-containing protein n=8
           Tax=Gammaproteobacteria RepID=B2I1A9_ACIBC
          Length = 262

 Score =  226 bits (577), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 69/253 (27%), Positives = 109/253 (43%), Gaps = 3/253 (1%)

Query: 10  YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69
            + D   +A +A       D L    H HR+ Q + A  G +    E+  W+V P   VW
Sbjct: 7   NDVDHLPQAVLALGSDYPADTL-LDTHSHRRAQFLYAPEGLMKVETEDGQWLVLPYSGVW 65

Query: 70  IPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCC-TLKISPLCRELILTLANRTTTQRAE 128
           IP G  H   ++       L+IE S        C  +++SPL  +L++         +  
Sbjct: 66  IPAGKPHRVWLSK-VSTYSLYIEVSNAPRQANYCEVIQVSPLLHQLLIQANQLPIDYQRA 124

Query: 129 PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSE 188
                LI +L  EL   P   L +P+  +  +        + P    +   WA     SE
Sbjct: 125 GRDGSLIDLLLYELEAAPALPLFIPLPHNTLLSKQCADFMQHPDIHSSPKDWAHDHNKSE 184

Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGL 248
           R   R    ETG+SF+ WR ++ +I AL  L +  ++ ++A +LGY+ + AF  MF K +
Sbjct: 185 RTFHRWFKTETGMSFQAWRNRVCIIYALNALKENISITEIAFSLGYEHSAAFTAMFSKIM 244

Query: 249 GQTPGRYIARLTT 261
           G  P  +  R  T
Sbjct: 245 GYPPTHFQKRFHT 257


>UniRef50_B5EUU3 Transcriptional regulator, AraC/XylS family n=29
           Tax=Gammaproteobacteria RepID=B5EUU3_VIBFM
          Length = 260

 Score =  226 bits (577), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 119/249 (47%), Gaps = 3/249 (1%)

Query: 10  YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69
           ++ D+     +   I A      S +H H+KGQL+ A  G ++  + +++ ++PP  AVW
Sbjct: 10  FDADKLPADVIG--IAADVGRHDSGMHYHQKGQLLYAPEGCMSFALSHSMCVLPPTKAVW 67

Query: 70  IPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129
           IP    H   +T       L+ +      P     +++  L R LI  +A      + + 
Sbjct: 68  IPANTPHRAFMTNVVAYRSLYFDCDKFPCPEDIVMIEVDELLRALINKMAMWPW-DKPKS 126

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
            T     + ++   +  QQ   LP+ +  ++ T  E + K       L   +     S +
Sbjct: 127 ETLHTTALFWESFYEAHQQPFSLPLPTGKRLITFSEQVQKPDFLAPDLQTLSKKIGASSK 186

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
            + RL  KETG+S+++W+QQ +++ +++ L +   V  VA  L + S +AFI+ FKK +G
Sbjct: 187 TITRLFKKETGMSYQEWKQQWRVLKSIELLCENTQVSDVAFQLDFSSDSAFISFFKKQVG 246

Query: 250 QTPGRYIAR 258
           QTP  +I +
Sbjct: 247 QTPLAFIKQ 255


>UniRef50_Q7MFB7 AraC-type DNA-binding domain-containing protein n=32
           Tax=Gammaproteobacteria RepID=Q7MFB7_VIBVY
          Length = 287

 Score =  226 bits (575), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 75/245 (30%), Positives = 120/245 (48%), Gaps = 1/245 (0%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
             + V            +  H H  GQ+ L   G +    +   ++ PP  A+W+P G+ 
Sbjct: 42  PPSDVFMNFEEFLSNTETREHSHTWGQVQLISGGILEMEAQGTRFLAPPHLAIWVPPGIM 101

Query: 76  HSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134
           H +      E C L I        P   C ++++P+   +I     R      E   +RL
Sbjct: 102 HRSFNRRPLEYCSLNIAKQLTDKFPGKTCLIQVTPIVSAIIDDFRLRDINVATEESDKRL 161

Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
           +QVL D+L  +  Q   LP S H  +  ++  + + P +  +L +WA     +ER LAR 
Sbjct: 162 VQVLLDQLATKETQHHFLPSSDHKYLAPILAHVEENPTDTTSLSEWAEKVHTTERTLARH 221

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
              E G+SF +WR +++ + +++ L KG TV++VA TLGY+  + FI+MFKK  GQTP +
Sbjct: 222 CQSELGMSFTEWRLRVRYLYSMELLRKGQTVKEVALTLGYNQASPFISMFKKYSGQTPEQ 281

Query: 255 YIARL 259
           Y  RL
Sbjct: 282 YKNRL 286


>UniRef50_Q7D2T6 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria
           RepID=Q7D2T6_AGRT5
          Length = 215

 Score =  226 bits (575), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 102/215 (47%), Positives = 141/215 (65%), Gaps = 2/215 (0%)

Query: 45  LALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCT 104
           + L G +TC V + +WMVPP   VW+PGG+ HSN  TANA L FLFIEP A  +P  CCT
Sbjct: 1   MPLRGGVTCRVPSGMWMVPPHCGVWVPGGMLHSNVATANARLFFLFIEPGAADLPNRCCT 60

Query: 105 LKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMV 164
           L +SPL RELI+ LA+++    A+     +  +L   L + P + LHLP++  P++  + 
Sbjct: 61  LSLSPLVRELIIELADQSEVATADS--ELMTTLLLSALSRMPVEHLHLPLTDEPRLARIA 118

Query: 165 EMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDT 224
             +A  P +   + QWA   AMSE +LARL+  +TGL+F +WRQQLQLI+A++ L  G T
Sbjct: 119 SELADDPSDRSTMAQWARRVAMSENSLARLVQHQTGLTFGRWRQQLQLIIAIRSLASGAT 178

Query: 225 VQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
           VQ+V+  LGY+S +AFITMFKK LG +P RY+   
Sbjct: 179 VQQVSGDLGYESVSAFITMFKKALGTSPSRYLRNF 213


>UniRef50_UPI00019092C6 AraC family transcriptional regulator n=1 Tax=Rhizobium etli CIAT
           894 RepID=UPI00019092C6
          Length = 283

 Score =  225 bits (574), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 72/222 (32%), Positives = 104/222 (46%), Gaps = 1/222 (0%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
            H+HR+GQL+ A  G I  T     W++PP   +WIP GV HS +      +  L++E  
Sbjct: 4   PHEHRRGQLMNATSGLIVLTTPEGKWVMPPHRGMWIPAGVRHSVRAGGLVRMQSLYVETD 63

Query: 95  -AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153
            A  MP  C  L+I+   R LI  +   +     +  ++ L+ +   E+ + P   L LP
Sbjct: 64  RAEAMPVHCQVLEITTFMRSLIGEVVGLSLDTEVDGRSQALMDLTLYEMERLPSLPLSLP 123

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
             S  +           P        W+    MS R   R+  ++TGLSF  WRQQ  L+
Sbjct: 124 FPSDERFAKKCREFVGQPNIHQTTDDWSRELGMSRRAFTRMFRQQTGLSFVGWRQQACLL 183

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            AL  L  G +V  VA  LGY++  AF  MFK+  G+ P  Y
Sbjct: 184 SALPQLSAGQSVTSVAMELGYENPAAFTIMFKRAFGKPPLAY 225


>UniRef50_C9PF84 Transcriptional regulator AraC family n=1 Tax=Vibrio furnissii CIP
           102972 RepID=C9PF84_VIBFU
          Length = 248

 Score =  225 bits (574), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 1/243 (0%)

Query: 18  AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77
             V    H      T   H+H+  Q + AL+G I        W+V     +WIP GV HS
Sbjct: 4   PPVLAYAHDYMHGDTEAAHEHQCAQFLHALNGVIRVDTAAGTWVVTANKGMWIPAGVSHS 63

Query: 78  NQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136
            ++T + ++  LF++  +   +P TC   ++  L + LI+   +    + A     R+ +
Sbjct: 64  LRITGHVKVRTLFVDAMARADLPNTCVLSEVPSLLKHLIVEAVSLPEERIAGTREERIFE 123

Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196
           ++ DEL +      +LP  S   +  + + ++            A +   SER ++R   
Sbjct: 124 LILDELRRLKPVDFYLPNPSSDGLIMLCDYVSDRIAHPWTATDAAKYLGQSERTVSRKFQ 183

Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           +E GL+F +W +Q +L+ AL+ L  G +V   A  +GYDS +AF  MFK  +G TP  Y 
Sbjct: 184 QELGLTFTEWLRQKRLVHALELLASGHSVLDSALEIGYDSPSAFSAMFKSRIGLTPSEYT 243

Query: 257 ARL 259
           A +
Sbjct: 244 ASI 246


>UniRef50_D0J7G0 Transcriptional regulator, AraC family n=11 Tax=Proteobacteria
           RepID=D0J7G0_COMTE
          Length = 274

 Score =  225 bits (573), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 73/243 (30%), Positives = 123/243 (50%), Gaps = 1/243 (0%)

Query: 22  FCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT 81
           F      +   +P H HR G L  A HG+++  V     + PPQ+ VWIP GV HS  + 
Sbjct: 31  FRYDEFGEHSEAPPHSHRWGHLNYAAHGSLSMDVPTGHILCPPQHGVWIPPGVVHSCYLQ 90

Query: 82  ANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFD 140
              +   +++ P     +P T   +++ P+ + ++     R           RL +V+ D
Sbjct: 91  HAVQYRSVYLAPDLCADLPQTAGCMRLGPIVKAVLADFGARGVQIPVTDADLRLARVVHD 150

Query: 141 ELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETG 200
           +L   P +   LPV+ HP +  +++ M   P +  +L +WA    M+ER LAR   +E G
Sbjct: 151 QLRATPLELSFLPVARHPALVQVLDAMQSRPDDHRSLAEWAETVHMTERTLARHCQRELG 210

Query: 201 LSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260
           +S  +WRQ+++ + A+  L  G TVQ++A+ LGY + +AFI MF++  G  P ++     
Sbjct: 211 MSLGEWRQRMRYLQAIDALEAGHTVQQIAYDLGYSTPSAFIAMFQRESGLPPEQFRREFC 270

Query: 261 TVS 263
             S
Sbjct: 271 ASS 273


>UniRef50_B7UVC2 Probable transcriptional regulator n=6 Tax=Pseudomonas aeruginosa
           RepID=B7UVC2_PSEA8
          Length = 260

 Score =  225 bits (573), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 83/244 (34%), Positives = 131/244 (53%), Gaps = 3/244 (1%)

Query: 19  AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78
           AV              +H+H  GQL+ A  G +  + E   ++VP Q A+WIP  V H+ 
Sbjct: 19  AVYLRAFEMPAGHRVEMHEHPWGQLMYAASGTLRASTERHSYLVPAQRALWIPPRVRHAA 78

Query: 79  QVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL 138
           +         L+++    ++P  C  L++S L REL+L  A             RL+QV+
Sbjct: 79  EACNPVLFRSLYLD---RSLPGGCRVLEVSGLLRELLLRAAEFPREYPPGGEAERLMQVV 135

Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198
            DE+ +  +  L+LP+   P++R + + +   P +   +  WAG    S R LARL  ++
Sbjct: 136 ADEVGRLREAPLNLPLPGDPRLRRITDALQADPADPRGISDWAGLVGASRRTLARLFREQ 195

Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           T LSFR+WRQ+L+L+ A+  L +G +V +VA  LGYDST+AFI++F++  GQTPG +   
Sbjct: 196 TQLSFREWRQRLRLLNAVAALEEGASVTRVASDLGYDSTSAFISLFQRHFGQTPGCFARS 255

Query: 259 LTTV 262
           L   
Sbjct: 256 LRLP 259


>UniRef50_B1JGH9 Transcriptional regulator, AraC family n=26 Tax=Enterobacteriaceae
           RepID=B1JGH9_YERPY
          Length = 261

 Score =  224 bits (572), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 1/224 (0%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
            H H  GQLI    G +  ++    ++ PP++ VW+P G+EHS+          + I   
Sbjct: 32  PHTHPFGQLICVKSGVLAMSIGGQRFLAPPEFIVWVPAGMEHSSYNRKPMHFRAIDIALD 91

Query: 95  AVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153
             T +P +   + +SP+   ++     R          RRL  VL D+L   P Q+ +LP
Sbjct: 92  FCTELPASPGLMNVSPIFNAIVEDCFTRDLLMPETQQDRRLAHVLIDQLKVSPVQRTYLP 151

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
            S    +  ++  + + P +  +L  WA     +ER L+R   +E G++F +WRQ+L+ +
Sbjct: 152 TSQDKLLSPILAALERCPADSTSLALWAKRVYTTERTLSRRCQQELGMAFSEWRQRLRFL 211

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
            A+  L +G TV  VA  +GY S +AFI MF++  G TP R+  
Sbjct: 212 HAISLLEQGKTVNSVALDVGYSSASAFIAMFQQISGTTPERFRR 255


>UniRef50_A6V354 Transcriptional regulator, AraC family n=3 Tax=Pseudomonas
           RepID=A6V354_PSEA7
          Length = 244

 Score =  224 bits (572), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 72/240 (30%), Positives = 117/240 (48%), Gaps = 4/240 (1%)

Query: 19  AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78
           A+A   H G + L    H H + QLI A+ G +        W+VP  +A+W+P   EH  
Sbjct: 5   ALACDHHDGEEIL---PHCHAQAQLIHAISGVMLVGAARRNWVVPAGHALWVPPNTEHQI 61

Query: 79  QVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137
           +++ +  +  LF+  +        C  + +SPL REL++  +       +    R + ++
Sbjct: 62  RMSGSVRMRTLFMPAATWPRDGEQCQVIAVSPLLRELLVAASEMHLGDSSAQRRRCIHEL 121

Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197
           L  EL       +HL +   P++  +   +   P E   +  WA    MS R LARL  +
Sbjct: 122 LLVELDAAQTIGIHLVMPRDPRLLRLCSQVIGTPAEETRMEDWARQLNMSSRTLARLFQR 181

Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           E G+SF  WR + +++++LQ L  G +V +VA   GY S +AF   FK+ LG +P  Y A
Sbjct: 182 ELGMSFGDWRTRARMVLSLQRLSAGASVLEVALEHGYQSPSAFSQTFKRTLGHSPSHYQA 241


>UniRef50_Q13M62 Transcriptional regulator, AraC family n=4 Tax=Burkholderia
           RepID=Q13M62_BURXL
          Length = 266

 Score =  224 bits (570), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 83/257 (32%), Positives = 122/257 (47%), Gaps = 7/257 (2%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           MM  ++ +G E         AF I    + L  P+   R+ +LI A  G +    E   W
Sbjct: 17  MMDTVDPDGVE-------QPAFVIGEHHETLDEPLGAFRRARLIHASAGVLIVRTETGRW 69

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120
           +VPP +A+WIP GV H    T     C L+    AV +P     +    L   L+   A+
Sbjct: 70  VVPPGHALWIPAGVLHRLSATGPVRFCSLYAGADAVPLPFHSIAVVPDRLVAALLSAAAD 129

Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180
               +  +    RL+QVL D LP  P   L L     P+   + + ++  P +   L   
Sbjct: 130 LPHDKPFDEPAARLVQVLLDRLPGLPVAPLGLNWPRDPRALRIADALSSNPADSAVLEDL 189

Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240
           A    ++ R  ARL VKETG +F QWRQQL+L+ A++ L  G +V +VA  +GY   ++F
Sbjct: 190 AAAAGVTARTAARLFVKETGQTFGQWRQQLRLLAAVEHLGAGASVTQVAPEVGYSDVSSF 249

Query: 241 ITMFKKGLGQTPGRYIA 257
           I +F+   G TP RY  
Sbjct: 250 IAVFRDAFGDTPARYFR 266


>UniRef50_C7MAZ5 Transcriptional regulator containing an amidase domain and an
           AraC-type DNA-binding HTH domain n=2 Tax=Actinomycetales
           RepID=C7MAZ5_BRAFD
          Length = 261

 Score =  224 bits (570), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 80/250 (32%), Positives = 121/250 (48%), Gaps = 3/250 (1%)

Query: 24  IHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTAN 83
           IH    +  +P H H +G L+    G ++   E+  W+ PP  A WIP G  H ++    
Sbjct: 14  IHLLGHDERTPSHVHEQGHLVYPASGVLSIVTEDGSWIAPPNRAAWIPAGSFHQHRAHGA 73

Query: 84  AELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDEL 142
            ++  +F+  +A  + P     L ++PL RE  L L   +   R      RL +V+ D+L
Sbjct: 74  TDMRIVFMADAAAGLLPAHPSVLAVTPLAREATLALT--SDVPRTAESRERLRRVIIDDL 131

Query: 143 PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202
              P+Q LHLP     ++R +  ++ +   +   L Q        ER L+RL  + TG+S
Sbjct: 132 TAAPEQPLHLPEPRDERLRALTHLVEQEMEDPATLEQLGRRIGAGERTLSRLFQQTTGMS 191

Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262
           FRQWR QL++  AL  L  G +V   A   G+ + +AFI  F   +GQTPGRY   L   
Sbjct: 192 FRQWRIQLRIHRALLLLTDGLSVVDTATACGWANPSAFIDAFTALVGQTPGRYQRSLRGA 251

Query: 263 SPQSAKPDPR 272
           S    +  PR
Sbjct: 252 SSPLPETPPR 261


>UniRef50_B0T088 Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. K31
           RepID=B0T088_CAUSK
          Length = 249

 Score =  224 bits (570), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 80/223 (35%), Positives = 109/223 (48%), Gaps = 1/223 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP-S 94
           H H  GQL+ A  G +    + A W+VPP  A+WIP G+ H       A +  L+I P  
Sbjct: 26  HAHVWGQLVFASAGVMRVATDAATWLVPPTKAIWIPAGLTHQILFGGEAAMRTLYIAPGR 85

Query: 95  AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           A T+PT    L+++PL RELIL +          P   RL  +L D + Q   Q L LP+
Sbjct: 86  AATLPTEPQALEVAPLLRELILHILKIGMLTPQRPEHDRLAGLLIDLMRQARSQDLCLPL 145

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
               +   +   +   P E   L   AG F  S R L R+  +ETGL+   WRQ+ +LI 
Sbjct: 146 PRDRRALALAIHLQARPDEERGLAALAGPFGASLRTLQRVFPRETGLTLETWRQKARLIH 205

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           ++  L  G +V   A   GY S  AFI  F +    TPGRY+A
Sbjct: 206 SVACLTTGASVTDAALASGYRSVGAFIGAFTRQFEVTPGRYLA 248


>UniRef50_C0YIN0 AraC/XylS family transcriptional regulator n=1 Tax=Chryseobacterium
           gleum ATCC 35910 RepID=C0YIN0_9FLAO
          Length = 260

 Score =  223 bits (568), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 67/251 (26%), Positives = 119/251 (47%), Gaps = 6/251 (2%)

Query: 9   GYEPDRHHEAAVAFCIHAGTDELTSPVHQHR-KGQLILALHGAITCTVENALWMVPPQYA 67
            ++ D  HE  V   I +      S  H H  K QL+ A  G +T T  +   ++PP   
Sbjct: 9   DFDADSIHEQVVG--IASDMVMHDSGFHFHTTKAQLLYAPSGCMTVTTSDRQLILPPFRM 66

Query: 68  VWIPGGVEHSNQVTANAELCFLFIE--PSAVTMPTTCCTLKISPLCRELILTLANRTTTQ 125
           +WIP    H            ++ +   S   M +    L ++PL +E+I  +       
Sbjct: 67  LWIPAHEVHRVNFRNIVAYRSIYFDVSYSRKYMKSDLKVLHVNPLLKEIIERICFWEWPA 126

Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185
            +   T  L++V +DE+ + P+++L L +    +   + E           L   A    
Sbjct: 127 LSNDQTN-LLKVFWDEMSKAPEEKLELKMPQDKRFTKIAEEWTLRQSVPPMLKDLAQKAG 185

Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245
            +E+ ++R+  KETGLS++ WRQQ +L  +++ L +G+++ +V++ L + S +AFI  FK
Sbjct: 186 AAEKTISRIFKKETGLSYQDWRQQWRLQRSIELLAEGNSIGEVSYILDFPSDSAFIEFFK 245

Query: 246 KGLGQTPGRYI 256
           K  G TP +Y+
Sbjct: 246 KHTGTTPLQYL 256


>UniRef50_Q5E435 Transcriptional regulator, AraC family n=3 Tax=Vibrionaceae
           RepID=Q5E435_VIBF1
          Length = 271

 Score =  223 bits (568), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 4/237 (1%)

Query: 22  FCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT 81
           F + A T+ L+   H H  GQL L   G +   V+      P  YA+W P  + H     
Sbjct: 33  FFLEAKTETLS---HSHPWGQLHLIKQGRLEMEVDKQKMFCPANYAIWTPAHLLHRAFNH 89

Query: 82  ANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFD 140
            + E C + IE      +PT+ C   ++PL R ++  L  R TT+      + L  VL +
Sbjct: 90  NDVEYCAINIEFELSQKLPTSACMFPLTPLLRAIVDDLVERQTTEVLSTEDKYLSHVLIE 149

Query: 141 ELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETG 200
            L +    + +LP +    +  ++  + + P +  +L  WA     +ER LAR   KE  
Sbjct: 150 RLSKTNPIENYLPFTDDKLLAPILMQLQENPADDSSLEIWAKRVFSTERTLARRFQKELK 209

Query: 201 LSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           +SF  WRQ+ +L  A+  L    ++ ++A+ LGY   ++FI MF+K  G TP ++  
Sbjct: 210 MSFNDWRQRAKLAKAMVLLKDAISINEIAYQLGYSQGSSFIKMFRKHTGVTPEQFRK 266


>UniRef50_A6V4X5 Probable transcriptional regulator n=7 Tax=Pseudomonas aeruginosa
           RepID=A6V4X5_PSEA7
          Length = 254

 Score =  223 bits (568), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 67/245 (27%), Positives = 106/245 (43%), Gaps = 1/245 (0%)

Query: 15  HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGV 74
               A  F +        +  H H  GQL     G +    E     +PP+   WIP G 
Sbjct: 4   EPLPAPLFALRLDRATSRTAPHSHACGQLYCLERGLLVVEDERGRQALPPRQIAWIPPGH 63

Query: 75  EHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRR 133
            H+            +++ S    +P +   L  S     ++                  
Sbjct: 64  RHAAHSHGALLGWSAYLDTSHCHALPASPGVLACSDFVALIVERATRWPAGSAWSAEREN 123

Query: 134 LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193
           L++VL DEL     Q+  LP    P++R + E +   P +     +WA +  +S R+L+R
Sbjct: 124 LLRVLLDELRHAVPQRTRLPYPGDPRLRRIAEALLANPGDPRPAAEWARWAGLSSRSLSR 183

Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253
           L   ETG+SF QWRQ  +L  A++ L  G  V +VA +LGY+S ++F + F+   G+TP 
Sbjct: 184 LFGTETGMSFAQWRQLARLHAAVERLAAGQAVGEVAWSLGYESPSSFASAFRAVFGETPS 243

Query: 254 RYIAR 258
            Y +R
Sbjct: 244 GYSSR 248


>UniRef50_C1MBM6 Transcriptional regulator n=2 Tax=Citrobacter RepID=C1MBM6_9ENTR
          Length = 261

 Score =  222 bits (567), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 66/241 (27%), Positives = 104/241 (43%), Gaps = 2/241 (0%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
              V F  +        P H H   Q   A  G++   V    W++P  Y +WIP   EH
Sbjct: 21  PQDVFFRSYVLEANHHVPQHSHSFMQFHFARKGSMRIDVAGKCWIIPAHYGIWIPNNTEH 80

Query: 77  SNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLAN-RTTTQRAEPMTRRL 134
           +     +  L  L I+P  +      C  + IS   RE I    N  +    ++    +L
Sbjct: 81  AVWALDDVYLENLDIKPGFLEESINECKVVAISDFAREFIHYATNSISGHYDSQSKEGKL 140

Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
           + VL D + Q P+    LP     ++  +   + + P    ++  WA    MS R  +R 
Sbjct: 141 VSVLVDIILQLPEVAFVLPWPQDRELTKVCRTIQESPALEHSVEYWAQHLGMSARTFSRH 200

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
             KETGL F  W+Q+++++ ++  L K  +V  VA  +GY ST AF   F++  G  P  
Sbjct: 201 FKKETGLPFSVWKQKMRILESVLMLKKNKSVTAVALDVGYSSTAAFSYAFRQAFGVPPSN 260

Query: 255 Y 255
           Y
Sbjct: 261 Y 261


>UniRef50_C8Q2C9 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b
           RepID=C8Q2C9_9ENTR
          Length = 261

 Score =  222 bits (565), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 80/239 (33%), Positives = 123/239 (51%), Gaps = 6/239 (2%)

Query: 22  FCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT 81
              HAG +E     H H   QL+L L G +      A W + P  A+W+PG V H+    
Sbjct: 23  MHYHAGREER---WHAHEVAQLVLCLQGVMRVQTHTASWTLTPGRALWLPGTVPHALTAL 79

Query: 82  ANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ-VLF 139
           ++     L++EP  A        ++ ISPL + L+ TL         +P+   LI  +L 
Sbjct: 80  SDIRSLSLYLEPVVARAFWPEARSMMISPLLQALMQTLVEIGLQPHPDPLRAELITPLLL 139

Query: 140 DELPQQPQQQLH-LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198
           DEL + P+  +  LP+ +  ++  + + + + P     L +W      S R LARL   +
Sbjct: 140 DELRRAPEGPVCVLPLPADRRLMNICQQLLQSPASSDTLEEWGSRVGASSRTLARLFRDQ 199

Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           TG++F QWRQQL+L  AL  L +G  V ++A  LGY S +AFI+MF++ LG TP R++ 
Sbjct: 200 TGITFTQWRQQLRLSEALVQLAQGQPVLRIASQLGYQSPSAFISMFRRLLGDTPQRFLR 258


>UniRef50_D2B3A1 AraC family transcriptional regulator n=5 Tax=Actinomycetales
           RepID=D2B3A1_STRRD
          Length = 265

 Score =  222 bits (565), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 75/238 (31%), Positives = 120/238 (50%), Gaps = 5/238 (2%)

Query: 20  VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79
           V       + +  SP H H   QL     G ++  V++A W++PP  A+W+P GV H   
Sbjct: 24  VVGHFPLSSGQWISP-HSHTHHQLAWTRSGVLSVAVDDAYWVLPPTRALWLPAGVVHRTG 82

Query: 80  VTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL 138
            T +A LC L++ P   T+  T    + ++ L   LI  LA       A     R   V+
Sbjct: 83  ATRDALLCSLYLNPVRCTLNWTEPTAVGVNGLLAHLIAYLAREDLADDA---RLRAEAVV 139

Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198
            D L   P   + +P     ++R + + +   P +  +L   A    +S R L RL V++
Sbjct: 140 LDLLHPLPALPIDVPRPVDERVRAVADTLLADPSDSRSLEAHARSIGVSRRTLTRLFVRD 199

Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           TGLSF +WR  ++L  AL  L +G  V +V+HT+GY + +AF+  F++ +G +PGRY+
Sbjct: 200 TGLSFDRWRTHMRLRAALPLLAEGRPVSQVSHTVGYATPSAFLAAFRRTVGTSPGRYL 257


>UniRef50_A4CF02 Transcriptional regulator, araC family protein n=1
           Tax=Pseudoalteromonas tunicata D2 RepID=A4CF02_9GAMM
          Length = 265

 Score =  221 bits (564), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 2/250 (0%)

Query: 10  YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69
           + PD      +               H H   QL  +  G +    +  L++VPPQ A+W
Sbjct: 16  HYPDGLPHPVMPLSSEFSPMTQVI-KHAHPWSQLAYSSQGILQIETDQGLFVVPPQQALW 74

Query: 70  IPGGVEHSNQVTANAELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAE 128
           +P  + H         L  L   +     +     TL + PL + LIL + +     +  
Sbjct: 75  LPPNMTHQITCQCPTRLRSLHFQDHITAPLGDAIQTLAVGPLLQALILEVCHWGRDYQLS 134

Query: 129 PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSE 188
              +R+I VL D+L   P+Q   +P  +  +++ +V      P     L  +A     S 
Sbjct: 135 TEKQRVIDVLVDQLVSAPKQDFFIPNITDKRLQPIVSHFNHHPESKRTLNDFANQVGAST 194

Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGL 248
           R L RL +    + F QW+Q+++++ AL  L +   ++ +A TLGYDS ++FI  FK+ +
Sbjct: 195 RTLHRLFLLNFAMGFNQWKQRIRVLKALTLLDQDLPIKDIAATLGYDSDSSFIAAFKQQM 254

Query: 249 GQTPGRYIAR 258
           G  P +Y  +
Sbjct: 255 GLPPKQYRKQ 264


>UniRef50_Q28MP8 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1
           RepID=Q28MP8_JANSC
          Length = 270

 Score =  221 bits (564), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 77/248 (31%), Positives = 116/248 (46%), Gaps = 2/248 (0%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
               V +     TD L  P H H K QLI A+ G +      + + +PP  A+ +P    
Sbjct: 23  DRPIVGYAKDYPTDHLALP-HTHPKAQLIYAVSGVMHVDTGTSSYTLPPTTALLMPANRA 81

Query: 76  HSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134
           HS  +     +  LF++    ++  + C  + +S L +ELIL   +             +
Sbjct: 82  HSIYMDGPVAMRALFLQQKQPSVDLSACKVVSVSALLKELILAACDEPVEWEQTGRAPHI 141

Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
           + +   E+ Q     L LP+ + P+I  + + +   P +  +L  WA F   SER LARL
Sbjct: 142 VALALHEIAQAVNLPLGLPLPTDPRIARVTDALRMRPADSRSLQDWALFAGASERTLARL 201

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
             KETG++F QWR Q +L  AL  L +G T+   A   GYDS  AF   F++  GQTPG 
Sbjct: 202 FRKETGMTFNQWRGQARLTAALSALSQGRTLAHAAAVAGYDSQPAFGAAFRRAFGQTPGE 261

Query: 255 YIARLTTV 262
             A+  T 
Sbjct: 262 ARAQHATR 269


>UniRef50_A5F0T8 Transcriptional regulator, AraC/XylS family n=40 Tax=Vibrionaceae
           RepID=A5F0T8_VIBC3
          Length = 263

 Score =  221 bits (563), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 74/246 (30%), Positives = 119/246 (48%), Gaps = 1/246 (0%)

Query: 15  HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGV 74
           H  + V     A      +  H H  GQ+ L   G +    E+  ++ PP  A+W+P G+
Sbjct: 16  HPPSDVFMNFEAFLSNTETREHSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAGI 75

Query: 75  EHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRR 133
            H +      E C L I        P     +K++ +   +I     R          +R
Sbjct: 76  RHRSYNRKPIEYCSLNIASQLTTAFPAKTSLIKVTSIVSAIIDDFRERNINVAQSSEDKR 135

Query: 134 LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193
           L+QVL D+L  +  Q   LP ++H  +  ++  + + P +   L QWA     +ER LAR
Sbjct: 136 LVQVLLDQLATRETQHHFLPSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLAR 195

Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253
               E G+SF +WR +++ + +++ L +G  V++VA TLGY+  + FITMFKK  G TP 
Sbjct: 196 HCQAELGMSFTEWRLRVRYLYSMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTPE 255

Query: 254 RYIARL 259
           +Y +RL
Sbjct: 256 QYKSRL 261


>UniRef50_A1BBK0 Transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria
           RepID=A1BBK0_PARDP
          Length = 262

 Score =  221 bits (563), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 83/245 (33%), Positives = 110/245 (44%), Gaps = 2/245 (0%)

Query: 13  DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72
           D      VA   +   D      HQHR+ QLI A  G I      A W+VPP   VWIP 
Sbjct: 10  DHAPRPIVAIG-NDYPDGFVIQPHQHRRAQLISAATGVIVLATPEATWVVPPNRGVWIPP 68

Query: 73  GVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131
              H  ++  +  +  L+IEP AV  MP+ C  L IS L R LI    N           
Sbjct: 69  ATRHHVRIVGDVGMQSLYIEPGAVPGMPSHCQVLGISALMRSLIAEALNLPLEYDQHGRD 128

Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191
             L++++  E+   P   L LP  S P++       A+ P        W+    MS R+ 
Sbjct: 129 GVLMELIRLEMGGLPALPLSLPFPSDPQLSRRCRAFAEKPAIHETTDDWSRALGMSRRSF 188

Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251
            R   +ETG SF  WRQQ  L+ A+  L  G+ V  VA  LGY++  AF  MFK+  G  
Sbjct: 189 TRFFRRETGASFMAWRQQACLLYAMPRLAAGEAVTTVAMDLGYENPAAFTIMFKRTFGSP 248

Query: 252 PGRYI 256
           P  Y+
Sbjct: 249 PLAYL 253


>UniRef50_Q0TI30 Transcriptional regulator, AraC family n=14 Tax=Enterobacteriaceae
           RepID=Q0TI30_ECOL5
          Length = 271

 Score =  221 bits (562), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 72/234 (30%), Positives = 113/234 (48%), Gaps = 5/234 (2%)

Query: 32  TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91
           T P H+H   QL+    G +      ++W+V    A+W+P  + H    T N  L  + +
Sbjct: 27  TVPWHKHLYAQLLYPAEGVVRIWAGESVWLVHASSALWLPPQMPHKFVATGNVLLKTVLV 86

Query: 92  -EPSAVTMPTTCCTLKISPLCRELILTLANRTT----TQRAEPMTRRLIQVLFDELPQQP 146
            E  + T+   C    ISPL REL++ +         T + +     L  ++  E+    
Sbjct: 87  SEAESETLGKVCFMTGISPLLRELLIAINQLPPSQSTTDKQQLRFSALETLILQEIKMGV 146

Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206
           +  L LP  +  +++ + E +         L   A    +S R L RL VKETGL+FR W
Sbjct: 147 KMSLELPWPNDERLQQLCENLLNNQGYLPTLDNLADKINVSSRTLMRLFVKETGLTFRHW 206

Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260
            QQ+ +I A+  L  G ++ K+AH LGY S  +F  MFK+  G +PG++  RLT
Sbjct: 207 VQQMHVISAVTLLDDGYSLTKIAHRLGYASAESFGNMFKRRTGYSPGKFTRRLT 260


>UniRef50_C5CUS1 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus
           S110 RepID=C5CUS1_VARPS
          Length = 280

 Score =  220 bits (561), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 78/267 (29%), Positives = 128/267 (47%), Gaps = 7/267 (2%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           +  L  + Y PD           H  + +    +HQH   QL  +  G I  + ++  ++
Sbjct: 14  VASLTPHLYAPDAVRPLRAKE--HFLSADTFVELHQHPWPQLTFSTRGVIRLSTQDGSYI 71

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN- 120
           VPP  AVW+P  + HS  +  +AEL  +++          C  L+ISPL R L+L L   
Sbjct: 72  VPPSRAVWVPANMPHSIMLIEDAELRTVYLHAWLGPPWEKCEVLEISPLLRALMLALDTT 131

Query: 121 ---RTTTQRAEPMTRRLIQ-VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGA 176
                      P   R+I  +L DEL +  Q ++ +P+ S  ++R + E + + P +   
Sbjct: 132 PDGLPPADPHAPQRERMIAPLLVDELERATQIRIDVPLPSDKRLRQLCETLLRNPADRAT 191

Query: 177 LGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDS 236
           L + A     SER +ARL   + G+S++QWRQQ  +  AL  L +G  V +VA   GY +
Sbjct: 192 LAERAAAIGASERTVARLFRDQLGMSWQQWRQQAVMAHALPLLARGMAVSQVAAASGYAT 251

Query: 237 TTAFITMFKKGLGQTPGRYIARLTTVS 263
            +AF  MFK   G++P  +  +  + +
Sbjct: 252 DSAFCAMFKAATGRSPTSFQHKKRSAA 278


>UniRef50_C4WMA6 AraC family transcriptional regulator n=1 Tax=Ochrobactrum
           intermedium LMG 3301 RepID=C4WMA6_9RHIZ
          Length = 249

 Score =  220 bits (561), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 84/242 (34%), Positives = 123/242 (50%), Gaps = 2/242 (0%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
             A     I         P H+HR  QLI A  G +T   EN  W+VPP  AVW+P  VE
Sbjct: 8   PLALAISTIAQDDASFAGPPHRHRDAQLIYARSGVVTVATENGSWVVPPNRAVWVPPMVE 67

Query: 76  HSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134
           H+ +     +   +FI P A   +P++C  +++S L RELIL L      + A P   R+
Sbjct: 68  HATRSHGPVQFRTIFIHPDAARSLPSSCGVVEVSSLLRELILRLVEL-QDRPATPFAHRV 126

Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
            ++L +EL   P + L L + S  ++RT+ + +   P    +L   A    MS R+  R 
Sbjct: 127 CELLLEELTFLPAEPLSLSMPSDHRLRTLCQTLQAEPDTELSLDAAASRTGMSRRSFMRH 186

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
             +ETG+++ +WRQQ +L+ AL  L  G  V  VA   GY S +AF   FK+ LG++P  
Sbjct: 187 FERETGMTYGRWRQQARLLAALPALAAGVPVVTVALDCGYQSASAFAATFKRSLGRSPAS 246

Query: 255 YI 256
           Y 
Sbjct: 247 YF 248


>UniRef50_C9NXQ1 Transcriptional regulator AraC family n=1 Tax=Vibrio
           coralliilyticus ATCC BAA-450 RepID=C9NXQ1_9VIBR
          Length = 243

 Score =  220 bits (561), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 69/226 (30%), Positives = 111/226 (49%), Gaps = 2/226 (0%)

Query: 32  TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91
            +  HQH   QL     G  T    +  W + P    WIP  ++H + V A+ E   +++
Sbjct: 16  ETEWHQHEYAQLYWLNKGIFTIETSDQQWTITPACLGWIPPHLQHRSDVVADIEAVMIYV 75

Query: 92  EPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150
             + +   P     ++ + L + LI  + +   +    P  R+  QVL DE+   P   L
Sbjct: 76  PLTWLNAFPQQAKVIQSNTLIQALIERITHFDLSAMTAPQQRQF-QVLLDEIHLAPASNL 134

Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210
           +LP+    K+R + + +   P +  +  + A  F  S R L+RL  KETG++F  WRQQ 
Sbjct: 135 YLPLPKEAKMRQIADTLLATPDDARSQTELAHDFGTSTRTLSRLFKKETGMAFGFWRQQA 194

Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           +L+ +L  L KG ++  VA + GY +T++FIT FK   G TP  Y 
Sbjct: 195 RLVSSLPMLEKGLSITYVALSCGYSNTSSFITAFKARFGVTPSVYF 240


>UniRef50_B9JII8 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter
           K84 RepID=B9JII8_AGRRK
          Length = 276

 Score =  220 bits (560), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 114/255 (44%), Gaps = 5/255 (1%)

Query: 7   LNGYEPDRH----HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMV 62
            NG+E + H      A V           T P H HR+ QL+    G I        WMV
Sbjct: 13  DNGHEQNMHWTEASNADVLVHSSEPQQGYTVPWHHHRRSQLLCVFAGVILILTTRGRWMV 72

Query: 63  PPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTT-CCTLKISPLCRELILTLANR 121
           PP +A++IP G+EHS ++ ++  +  +++ P            ++++ L R L+L     
Sbjct: 73  PPGHALFIPAGLEHSVEMLSDVSMKSVYVMPHDPRQSDEAPRVVEVTDLARSLLLEAIRL 132

Query: 122 TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWA 181
                       ++ +L +E+    ++ L LP  S  ++  +       P     L  WA
Sbjct: 133 REAPVGNRKAELVLSLLLEEISTLEERPLGLPFPSDRRLAALCRAYLANPTPNARLDDWA 192

Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241
              AMS R   R   KETG+SF  WRQQ  +   L  L +G  V  VA   GY+S  AF 
Sbjct: 193 EKLAMSRRTFTRQFRKETGISFTTWRQQASVFACLPQLAEGQPVTNVALEAGYESAAAFT 252

Query: 242 TMFKKGLGQTPGRYI 256
           TMF++ LG +P  Y+
Sbjct: 253 TMFRRMLGTSPRTYM 267


>UniRef50_Q4KJ22 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria
           RepID=Q4KJ22_PSEF5
          Length = 262

 Score =  220 bits (560), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 75/242 (30%), Positives = 117/242 (48%), Gaps = 1/242 (0%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
            A V F          +  H+H  G L  + HG +   +    +M PPQYAVW+P    H
Sbjct: 15  PAPVYFRYADFAAHSHALEHRHPWGCLEYSAHGVMHMEIAGQRFMSPPQYAVWVPPQTPH 74

Query: 77  SNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135
           S           + + P     +P    TL IS + + ++   A R          +RL 
Sbjct: 75  SFYTAQPINYRAVLLAPELCAELPAGGSTLAISEILKAILKDFAARDVQIPEGEADQRLA 134

Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
           QVL D+L Q P    +LP +S P +  +++ +   P     L  WAG   +SER LAR  
Sbjct: 135 QVLLDQLRQAPVHTCYLPYASSPDLLRVLQALQAEPGNNQPLAHWAGLAHVSERTLARQF 194

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           V+E G+SF +WRQ+ + + +++ L    ++Q++A  +GY S +AFI MF++  G TP +Y
Sbjct: 195 VRELGMSFGEWRQRQRFLASIEALESSRSIQEIAFDMGYSSASAFIAMFQRQAGSTPEQY 254

Query: 256 IA 257
             
Sbjct: 255 RR 256


>UniRef50_C3JKZ1 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus
           erythropolis RepID=C3JKZ1_RHOER
          Length = 267

 Score =  219 bits (559), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 77/265 (29%), Positives = 120/265 (45%), Gaps = 9/265 (3%)

Query: 6   NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65
           N++  + D      +A              H+HR+ Q + A++GA+    E+  W V P 
Sbjct: 3   NISINDVDHSPRGVLAIGTDY-PPGHVLAAHEHRRAQFLFAVNGAMNVETEDGEWTVLPS 61

Query: 66  YAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTT- 123
            AV IP GV H+  +        L+IEPSA    P  C  + +S L REL++   +    
Sbjct: 62  NAVMIPAGVAHAVTMDG-VSTRSLYIEPSAAPWFPVRCRVVAVSSLLRELLVAAVDMDVE 120

Query: 124 -----TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALG 178
                   A   +  ++Q++  EL       + LP+  HP +R +       P    +  
Sbjct: 121 LNVEDDSPAHGRSAAVLQLILHELRDLAPLPVELPLPRHPGLRALCAQYLAAPSIHDSPT 180

Query: 179 QWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTT 238
           +WA    +SER L RL++ ETG+S   W Q+  ++ AL  L  G +V  +A  LGY +  
Sbjct: 181 RWADRLHVSERTLHRLLISETGMSASSWMQRACILHALPKLSAGASVTAIASELGYSTPA 240

Query: 239 AFITMFKKGLGQTPGRYIARLTTVS 263
           AF  M  +  G  P  Y AR+TT +
Sbjct: 241 AFAAMCTRVSGAPPSSYRARVTTQT 265


>UniRef50_D1X8C9 Transcriptional regulator, AraC family n=2 Tax=Streptomyces
           RepID=D1X8C9_9ACTO
          Length = 304

 Score =  219 bits (559), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 73/242 (30%), Positives = 115/242 (47%), Gaps = 3/242 (1%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
           H+              +   H+H   Q++ A  G +T T     W+ P   A+W+P G  
Sbjct: 63  HDPVAPTRTRRLAPGGSIDAHRHDDHQIVYAGRGVLTVTTSAGSWVAPATRAIWVPAGTV 122

Query: 76  HSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134
           H+++     +L  + +  +   +   T   L +SPL REL++         R E    RL
Sbjct: 123 HAHRAYGELDLHLVGLPVTENPLGLETPTVLAVSPLLRELLIAYTRAEDDDRPE--RARL 180

Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
             VL D+L    QQ LHLP  + P +R + +++   P +   L +       S+R L+RL
Sbjct: 181 RAVLLDQLRASAQQPLHLPTPTTPLLRALCDILRADPADSRTLAELGHLVGASDRTLSRL 240

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
              + G++F QWR QL+L  AL  L +   V  VAH  G+ ST+AFI +F++  G TPG 
Sbjct: 241 FRSDLGMTFPQWRTQLRLHHALILLTERTPVTAVAHQCGWSSTSAFIEVFRRTFGHTPGS 300

Query: 255 YI 256
           + 
Sbjct: 301 HR 302


>UniRef50_Q01YV9 Transcriptional regulator, AraC family n=1 Tax=Candidatus
           Solibacter usitatus Ellin6076 RepID=Q01YV9_SOLUE
          Length = 257

 Score =  219 bits (558), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 69/230 (30%), Positives = 106/230 (46%), Gaps = 3/230 (1%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
           +       H+H   QL+ A+ G++T       W++PP  AV+IP    HS ++     + 
Sbjct: 27  SSGYQMEEHEHPWRQLLYAISGSMTVYAGRWSWIIPPGKAVFIPADCRHSMRMWGQVAMR 86

Query: 88  FLFIEPS---AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ 144
            L+   +   +      C  L ++PL RELIL +          P   RL  +L DE+  
Sbjct: 87  SLYFPAAWEVSAFASPECFVLSVTPLLRELILRVIEWAALDSRVPEHARLAALLVDEIAC 146

Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204
            P   L LP+    +   + + +   P    +L   A   A   R L RL   ETG+SF 
Sbjct: 147 APVTPLLLPLPIDARAAAVAQSVLASPARNDSLDDLARRHATGRRTLERLFRDETGMSFG 206

Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
            WRQQ +L+ ++  L +G  V + A   GY S +A+I  FK+  G TPG+
Sbjct: 207 MWRQQARLLHSVGALAEGKPVTEAALDAGYASLSAYIAAFKRTFGCTPGK 256


>UniRef50_A8GAI3 Transcriptional regulator, AraC family n=2 Tax=Serratia
           RepID=A8GAI3_SERP5
          Length = 257

 Score =  219 bits (557), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 69/232 (29%), Positives = 110/232 (47%), Gaps = 2/232 (0%)

Query: 31  LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLF 90
             +P HQH +GQL L  HG I    +   W +      W+P    H      N     L+
Sbjct: 14  HLTPWHQHTRGQLYLLTHGMIALETQEQQWAMTAGSIGWLPANCAHQALACGNVAGWSLY 73

Query: 91  IEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ 149
           +  S    +P        S L   L+  LA     QR     RRL+QVL DE+  Q    
Sbjct: 74  LPGSLCADLPKQPHLSTASGLILALVERLAQF-AGQRLNAPQRRLLQVLLDEMCAQESTP 132

Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209
           L LP+    ++  +   +   P    +  +WA +  +S R L+R  + ETG++F +WRQQ
Sbjct: 133 LQLPLPQDARLLKIARALLNEPASERSQSEWAAWTGLSVRTLSRHFISETGVTFARWRQQ 192

Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTT 261
            +++ +L+ L +G+ + ++A   GYD+ +A+I  F++  G TPG Y  +  T
Sbjct: 193 ARVLRSLEPLSRGEAINQIAGDCGYDNVSAYIAAFRQRFGTTPGLYFVQRET 244


>UniRef50_Q47UH5 Substrate-binding transcriptional regulator, AraC family n=1
           Tax=Colwellia psychrerythraea 34H RepID=Q47UH5_COLP3
          Length = 272

 Score =  219 bits (557), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 2/240 (0%)

Query: 19  AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78
            V   I           HQH   Q+     G +   V ++ +++P    ++IP    H +
Sbjct: 20  QVTAKIEQMAKGYIDRWHQHPWHQIAFPFEGILQTKVADSQFVIPHSGMLFIPANTPHES 79

Query: 79  QVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLAN-RTTTQRAEPMTRRLIQ 136
            V  + +   +++ P      P T   + ++P  REL+L + +  + +  +E    +L+ 
Sbjct: 80  FVVTDTKFIGIYLNPQFQNHFPLTAKAISVTPFLRELVLHINHGVSNSIVSEEELSKLVA 139

Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196
           VL D++      Q+ L + S  ++  + + +   P     L  WA     SER L+RL  
Sbjct: 140 VLIDQISSGESYQMKLLLPSDRRLMIIFKALMTDPQLNTKLSDWAKQVGASERTLSRLFT 199

Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           KE G++F  WRQ L+L+ +L  L    +VQ++A  +GY++ ++FI  FKK   QTP +Y 
Sbjct: 200 KELGMTFPLWRQHLRLVSSLNLLETNLSVQEIAFKVGYNADSSFIYAFKKLFQQTPQQYR 259


>UniRef50_C7JHN7 Transcriptional regulator AraC n=8 Tax=Acetobacter pasteurianus
           RepID=C7JHN7_ACEP3
          Length = 265

 Score =  219 bits (557), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 1/234 (0%)

Query: 30  ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89
             T+  H H  GQ+ +   G +    ++A W++ P+  +W+P  + H  +         L
Sbjct: 32  RRTTVPHVHNNGQIFVVESGVMAVKTQDAYWLIGPEQLLWLPPRLAHEARSHGAITGWSL 91

Query: 90  FIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQ 148
           +I       + +       + L    +  L+  T     +  T  L +  +DE    P Q
Sbjct: 92  YIAEDRCAFLVSKPFVADSTRLLSAQVERLSQNTQDTTWDARTACLAESFWDEFLSIPHQ 151

Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208
            L LP     +++ + + +   P +      WA    MS R+  R    +TG+ F  WRQ
Sbjct: 152 SLSLPFPGDVRLKRVADALCANPADSRGQQDWADMAGMSLRSFVRYFTADTGMQFSAWRQ 211

Query: 209 QLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262
           +L+++ A + L +G+ V  VA  +GY+S  AF   FKK  G +P  Y  R  T 
Sbjct: 212 RLRILNAQEKLARGENVTHVAAAVGYESLGAFAAAFKKNTGYSPSTYAQRCMTR 265


>UniRef50_Q2KXY1 AraC-family transcriptional regulator n=5 Tax=Proteobacteria
           RepID=Q2KXY1_BORA1
          Length = 274

 Score =  218 bits (556), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 109/261 (41%), Gaps = 3/261 (1%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           PD    + +   + +         H H   Q++ A+ G +  T E   + + P  A W+P
Sbjct: 14  PDVLSPSPMTMRVQSIGARNYFAAHTHEWHQVVYAVSGVLMVTAEGRSFAISPNQAAWVP 73

Query: 72  GGVEHSNQVTANAELCFLFI--EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129
            G EHS      AE   L++   P             +S L + L++  A          
Sbjct: 74  SGTEHSVGSFLGAEYRSLWLADHPGGTLSKGGVAVFGVSALLKALLVEAATLQGNPDESG 133

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
              R+ +++ D+L +     L L   +   +RT+ E +   P +      W     MS R
Sbjct: 134 YFGRIYRLVLDQLCRASPISLVLAWPASAALRTLCETLYNQPADPRGPDDWGRELGMSGR 193

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
            LAR    ETGL+ R WR+QL+L  A++ L  G  V  +A  LGY S ++FI  F+  + 
Sbjct: 194 TLARKFFAETGLTLRDWRRQLKLFRAIELLESGLDVTAIALELGYGSASSFIFAFRSAMK 253

Query: 250 QTPGRYIARLTTVSPQSAKPD 270
            +P  Y  R+    P  A  +
Sbjct: 254 CSPMAY-KRIRARDPAGAPGE 273


>UniRef50_A8T3D4 AraC-type DNA-binding domain-containing protein n=5 Tax=Vibrionales
           RepID=A8T3D4_9VIBR
          Length = 266

 Score =  217 bits (554), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 68/238 (28%), Positives = 119/238 (50%), Gaps = 2/238 (0%)

Query: 20  VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79
           +   + A   +  S VH H K QLI + HG +T T+E+  +++PP  A WIP G  H+ Q
Sbjct: 18  LVIGVAAEISDHDSGVHFHAKDQLISSQHGCMTITLEDVKYVLPPMRAAWIPRGTSHNAQ 77

Query: 80  VTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL 138
            T  A+   L+ +PS A  +P       ++PL R LI  ++      + E      + + 
Sbjct: 78  STNVAQYRSLYFDPSLASRLPRKIRIFDVTPLMRILIDRMSFWPF-DKPESEQINTLNLF 136

Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198
            +EL       L LP+    ++++ +  +        +L + +     SE+ + R+  +E
Sbjct: 137 IEELNDSEDVYLQLPLPKDYRLQSWISKIDDEAFSAPSLAKLSQLVGASEKTITRIFNRE 196

Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           TG+ ++ WRQQ +L+ A++ L  G  +  +AH L + S +AFI  F++  G TP  Y+
Sbjct: 197 TGMPYQSWRQQWRLLGAIELLSSGMRLSDIAHRLEFSSDSAFIYFFRQKTGTTPMSYL 254


>UniRef50_A9ILC9 Transcriptional regulator, AraC family n=3 Tax=Bordetella
           RepID=A9ILC9_BORPD
          Length = 308

 Score =  217 bits (553), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 69/231 (29%), Positives = 106/231 (45%), Gaps = 1/231 (0%)

Query: 30  ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89
            +  P H+H KG L+    G      +  +  + P    W+P G+ H      +A   FL
Sbjct: 78  GIAVPAHRHDKGMLLAVREGVSVVRSDGEVLTMTPGRLGWMPPGMLHEAHWFGDARGLFL 137

Query: 90  FIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQ 148
           ++   A   +P   C     PL   L+  LA     ++    T RL +VL  EL   PQ 
Sbjct: 138 YVRADACDSLPAQACAWASGPLVEALLQRLAGIPPDEQNLAHTLRLFEVLVAELRILPQA 197

Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208
            L LP+    ++  +   +   P +   +  WA    MS R L R    ETG++  +WRQ
Sbjct: 198 SLPLPMPRDHRLHELATTLLDRPDDARGIEAWARRVNMSSRTLMRRFRAETGITLGRWRQ 257

Query: 209 QLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
           Q +L+ +L+ L  G  V + A  +GY+S +AFI+ F+   G TP +Y AR 
Sbjct: 258 QARLLRSLEWLAAGKPVTEAALAVGYESISAFISSFRNAYGVTPSQYFARH 308


>UniRef50_C8QEY4 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b
           RepID=C8QEY4_9ENTR
          Length = 260

 Score =  217 bits (553), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 118/246 (47%), Gaps = 1/246 (0%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           P         +  H     +    H H  GQL    HG +   ++   ++ P QYAVWIP
Sbjct: 8   PHLQEFPGDLYFRHDRLPAMEWKTHAHPWGQLNYVSHGVMHLEIDGIRFLSPSQYAVWIP 67

Query: 72  GGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130
              +H +  + +     ++I    +  +P+   TL +SP+   ++   A R         
Sbjct: 68  PFADHFSFASRDLVYRTVYISLKLSNRLPSKPTTLNVSPVLHAILDDFALRDVRVPETEE 127

Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190
             R+ QV  D++      + +LP +   ++ ++++ +   P +  ++  +A    M+ R 
Sbjct: 128 DLRMAQVALDQILHIKPHETYLPYAVSDELNSVIKELQLNPGDRRSVEDFAEQLHMTSRT 187

Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250
           L R   +E G+SF +WR +L+ + A++ L  G TVQ++A  LGY + +AFI MFK+  G+
Sbjct: 188 LERRCQRELGISFGEWRSRLKFMHAIESLEAGLTVQRIALELGYTTPSAFIVMFKRFTGK 247

Query: 251 TPGRYI 256
           TP +Y 
Sbjct: 248 TPEQYR 253


>UniRef50_Q2BQ21 Transcriptional regulator, AraC family protein n=1
           Tax=Neptuniibacter caesariensis RepID=Q2BQ21_9GAMM
          Length = 235

 Score =  217 bits (553), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 70/231 (30%), Positives = 111/231 (48%), Gaps = 1/231 (0%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
             +   P HQH   QL+ A  G +   V      +PP+ AVWIP G EH       + L 
Sbjct: 2   PPQHFFPKHQHEWHQLLYATSGVLIVEVLGERLFIPPEKAVWIPQGHEHQVYSEYGSSLK 61

Query: 88  FLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146
            L+IE     +   T   LKI+PL ++LIL  +  +     +     LI ++   L +  
Sbjct: 62  SLYIEHSDQFSDWQTSKVLKITPLLKQLILEASTFSVHYSRQGYEAELIALMLASLHRLE 121

Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206
                LP  +   +  + +M  + P       + A   ++S+R L R  +KETG+S +QW
Sbjct: 122 TDHDQLPWPASRDLYRLCQMFYEQPSLRKTTAKLAIELSVSKRTLERKFMKETGMSVQQW 181

Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
             QL+ + +L+ L  G ++  +A  LGY S+ AFI MF+   G +PG++I 
Sbjct: 182 LLQLRFLKSLELLSAGYSITHIALELGYGSSAAFIHMFRDKTGVSPGQFIK 232


>UniRef50_D1XHM7 Transcriptional regulator, AraC family n=1 Tax=Streptomyces sp.
           ACTE RepID=D1XHM7_9ACTO
          Length = 271

 Score =  217 bits (552), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 119/243 (48%), Gaps = 3/243 (1%)

Query: 29  DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88
            +  +P H+H +G L+    G ++       W+ P    VWIP G EH ++     ++  
Sbjct: 25  HDERTPEHKHTRGHLVYPATGVLSLVTSVGSWIAPSNRVVWIPAGFEHRHRAHGRTDMRI 84

Query: 89  LFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147
           +F+ PS   + P     L ++PL RE  LTL      +R      RL +V+ D++   P+
Sbjct: 85  VFMAPSLAALLPAHPAVLVMTPLAREATLTLT--GAERRPAGARSRLRRVIIDDITTAPE 142

Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207
           Q LHLP     ++R +V ++ +G  +   LG+        ER L+RL  +ETG+SF QWR
Sbjct: 143 QPLHLPEPRDDRLRAVVALVEEGMSDPLTLGRLGHEVGAGERTLSRLFQRETGMSFPQWR 202

Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSA 267
            QL++  AL  L  G +V   A   G+ + +AFI  F   +GQTPG+Y   L     +  
Sbjct: 203 TQLRVHHALLLLADGGSVINTATACGWANPSAFIDAFTALVGQTPGQYRRSLREEVARPG 262

Query: 268 KPD 270
              
Sbjct: 263 DDP 265


>UniRef50_Q7D3B7 Transcriptional regulator. AraC family n=2 Tax=Agrobacterium
           tumefaciens RepID=Q7D3B7_AGRT5
          Length = 264

 Score =  216 bits (551), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 74/256 (28%), Positives = 128/256 (50%), Gaps = 1/256 (0%)

Query: 15  HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGV 74
            + A ++F   +          +    ++  AL G +   VE   ++ PP YA WIP   
Sbjct: 9   ENPAPLSFRTESYEAGGIFEEKRQPWCKVGYALTGVMEARVEGKRFLCPPHYATWIPADA 68

Query: 75  EHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRR 133
            H+     N +   ++I+      MP T CTL +SPL + ++   A R  T       RR
Sbjct: 69  VHACHNRENVKFVSIYIDRDLCAGMPETACTLALSPLIKAILADFAERRITVPQTEADRR 128

Query: 134 LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193
           L  VL D+L   P+++  LPVS+   ++ +++ +   P +  +L +WA     +E+ L+R
Sbjct: 129 LAFVLVDQLLNAPRRESFLPVSNDDLLQPVIDALQADPGDRRSLSEWARLLQTTEKTLSR 188

Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253
             +   G+SF +WRQ+L+L+ +L  +  G +VQ +A TLGY+S +AFI MF++  G +P 
Sbjct: 189 RFLGHLGVSFNEWRQRLKLVASLSLIEDGKSVQSIAKTLGYNSPSAFIAMFRRLTGTSPT 248

Query: 254 RYIARLTTVSPQSAKP 269
              +        ++ P
Sbjct: 249 NLRSTPARTIKAASTP 264


>UniRef50_A8GH45 Transcriptional regulator, AraC family n=18 Tax=Enterobacteriaceae
           RepID=A8GH45_SERP5
          Length = 257

 Score =  216 bits (551), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 72/248 (29%), Positives = 115/248 (46%), Gaps = 1/248 (0%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
           E        V F             H+H  GQL+    G +   +    ++ PP++ +W 
Sbjct: 9   EALIPAPRPVQFRCEEFNARTEFQPHRHSWGQLMWVKAGVMVLRIGGQRFLAPPEFVLWA 68

Query: 71  PGGVEHSNQVTANAELCFLFIE-PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129
           P  +EHS      A+   + I  P    MP   C + ++P+ R +      R        
Sbjct: 69  PAEIEHSCYNQRLAQCRMVDIALPLCAGMPVDPCLVSVTPIFRAIAEDFYARKQYIPQSK 128

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
              RL + L D+L   P QQ +LP S    +  ++E +   P +  +L  WA     +ER
Sbjct: 129 QDLRLCRALIDQLHLSPVQQTYLPSSEDKFLAPVLEALEHCPSDNTSLAAWAARVYTTER 188

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
            L+R   ++ G+SF +WRQ+L+ + A+  L +G TVQ+VA  +GY S +AFI MF++  G
Sbjct: 189 TLSRRCQQDLGMSFSEWRQRLRFLHAVSLLEQGKTVQEVALEVGYSSASAFIVMFQQIAG 248

Query: 250 QTPGRYIA 257
            TP R+  
Sbjct: 249 TTPERFRR 256


>UniRef50_B3Q9E6 Transcriptional regulator, AraC family n=2 Tax=Rhodopseudomonas
           palustris RepID=B3Q9E6_RHOPT
          Length = 286

 Score =  216 bits (550), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 76/240 (31%), Positives = 115/240 (47%), Gaps = 1/240 (0%)

Query: 19  AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78
            VA       +E TS  H HR+ Q IL + G      E   ++VPP + +WIP GV H +
Sbjct: 38  PVAAMTATYPNESTSTRHLHRRDQFILQITGVTAMMTERGHFVVPPGHGLWIPAGVVHQS 97

Query: 79  QVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137
           +     E   +++ P+       TC  ++ S L   L+                  LI++
Sbjct: 98  RAWGEVEAQTIYVTPNRERKASDTCRLIRASSLIEALMDEAVRIPEIYDQNGRDGTLIEL 157

Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197
           L  E+ + P+  LH+ +   P++  + + +   P     L  WA    +S R L RL  +
Sbjct: 158 LLTEIARMPEVTLHVQMPPDPRLAEICKAVLGDPSSNLTLDHWADKCGLSRRTLTRLFRR 217

Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           ETG SF  WRQ+++L+ AL  L  G+TV  VA  +GYDS +AF  MFK+ LG  P  Y+ 
Sbjct: 218 ETGQSFSGWRQRVRLLEALARLGAGETVTGVALDVGYDSPSAFAAMFKRELGSAPRHYLR 277


>UniRef50_Q2L001 AraC-family transcriptional regulator n=4 Tax=Bordetella
           RepID=Q2L001_BORA1
          Length = 258

 Score =  216 bits (549), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 75/247 (30%), Positives = 124/247 (50%), Gaps = 4/247 (1%)

Query: 10  YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69
           +E   H  A +A     G      P H HR+ QL+ A+ G +        W+VPP   VW
Sbjct: 13  FERTEHPVAVLAADYPQGAR---IPRHCHRRAQLLYAVEGVMIVEARAGRWVVPPTRGVW 69

Query: 70  IPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAE 128
           +  G+EH  +++   ++  +F+EP AV  +P   C +++ PL RELIL  A    +    
Sbjct: 70  LDAGLEHRVRMSGRVKMRTVFVEPDAVAHLPQGGCVVEVPPLLRELILAAALLPLSYEDT 129

Query: 129 PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSE 188
                L+++L  EL   P+  L+LP     ++R + + +++   +      WA    +S 
Sbjct: 130 GRDGLLMRLLLAELAAIPRLPLYLPWPQDKRLRALCDALSRDLAQVHEAAYWAEQMQVST 189

Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGL 248
           R L R  ++ETG++F +WRQ  +L+ AL+ L  G+ +  +A   GY S +AF  MFK+  
Sbjct: 190 RTLHRAFLRETGMTFGRWRQHARLLSALERLAHGEKILSIALDHGYTSQSAFSAMFKQHF 249

Query: 249 GQTPGRY 255
           G  P  +
Sbjct: 250 GVPPSAF 256


>UniRef50_C6CCZ8 Transcriptional regulator, AraC family n=3 Tax=Dickeya
           RepID=C6CCZ8_DICDC
          Length = 282

 Score =  216 bits (549), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 69/254 (27%), Positives = 107/254 (42%), Gaps = 5/254 (1%)

Query: 20  VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79
           V F  +  T       HQH   + + A  G +   +E    +VP  Y VWIP  V H   
Sbjct: 22  VYFRTYPLTKGTQVAQHQHPFVEFLYAREGGMRMEIEGKTLIVPVLYGVWIPANVPHQIL 81

Query: 80  VTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLA-NRTTTQRAEPMTRRLIQV 137
            T+N  L  L++EP    +   +   + IS   RE I     +            +++ V
Sbjct: 82  ATSNVLLESLYVEPEYAAIDHDSSKVVVISDFVREFIHYATEHIPEQYDEAGDDGKMVDV 141

Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197
           L   L Q P     LP      +  +   + + P     +  WA    MS R  +R   K
Sbjct: 142 LTTLLRQLPDAGFSLPWPESVVLVRVCRDIQQAPDAAHGIEAWAARTGMSVRTFSRRFRK 201

Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           ETG+SF +W+++L+L+ ++  L    +V +VA  LGY ST +F   F++  G  P RY +
Sbjct: 202 ETGVSFSEWKKRLRLLESIIMLKDNRSVTQVALDLGYSSTASFTFAFRQMFGVPPTRYQS 261

Query: 258 RLTTVSPQSAKPDP 271
                   +  P P
Sbjct: 262 ---AAHQSATSPPP 272


>UniRef50_B2UKA3 Transcriptional regulator, AraC family n=8 Tax=Betaproteobacteria
           RepID=B2UKA3_RALPJ
          Length = 265

 Score =  215 bits (548), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 69/243 (28%), Positives = 114/243 (46%), Gaps = 1/243 (0%)

Query: 18  AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77
           A   F       E     H H  GQL     G +   VE      P +Y +W+P    HS
Sbjct: 16  APFYFRYDHFQPETDIEPHTHPWGQLNRIALGLMEVVVETRRLTAPAEYLIWVPANQPHS 75

Query: 78  NQVTANAELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136
             +    +   +++ EP A  +P   C ++ +PL R L+     R  +  A+    R  +
Sbjct: 76  ASIRQATDFLSVYVAEPLARRLPPMACLIQQTPLVRALLEDFQARRISVMADDWDLRQFE 135

Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196
           +L + L +      +LP S   ++  +++ +   P +   L  WA     +ER LAR   
Sbjct: 136 LLVEMLGRAGHTDSYLPDSKDRQLEPILQAIRLFPADNTPLKTWAERVHSTERTLARRFQ 195

Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
            E G+SF QWR +++L+ AL  L +  ++Q +A  LGY + +AFI MF+K +G +P RY 
Sbjct: 196 HELGMSFVQWRNRVRLLRALVWLKEDCSIQDIALALGYGTPSAFIAMFRKQIGFSPQRYR 255

Query: 257 ARL 259
            ++
Sbjct: 256 RQM 258


>UniRef50_Q7VTI7 AraC-family regulatory protein n=3 Tax=Bordetella
           RepID=Q7VTI7_BORPE
          Length = 275

 Score =  214 bits (546), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 71/254 (27%), Positives = 112/254 (44%), Gaps = 14/254 (5%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
            A V        D    P H H + Q +    G +       LW+VPP  A+WIP    H
Sbjct: 17  PAVVTRRNRYPADAHVKP-HWHDRAQFLCGSSGVMRVATRRRLWVVPPMRALWIPARTVH 75

Query: 77  SNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQR--------- 126
             ++++  ++  L+I+ + V  MP  C  L ++ L REL++  +    + R         
Sbjct: 76  EIRMSSAVDMRSLYIDAALVRGMPDDCAVLDMTALMRELVVRASTDAPSTRDAPQRHEAS 135

Query: 127 ---AEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183
               +     L  ++  EL + P+  L LP+     +R + E        + +    A  
Sbjct: 136 DGALDEEYGLLSALMVAELRRLPRCGLDLPLPESAALRGLCERALADLSAFDSAQAQARR 195

Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITM 243
             +S R L R  + ETGLSF +W QQ +L+ A++ L  G  V  VA  LGY S +AF  M
Sbjct: 196 LKLSARTLYRRFLDETGLSFARWIQQARLLDAVRRLGDGQAVTDVALDLGYQSPSAFTAM 255

Query: 244 FKKGLGQTPGRYIA 257
           F + LG +P  +  
Sbjct: 256 FNRALGCSPREWRR 269


>UniRef50_A8AKK6 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC
           BAA-895 RepID=A8AKK6_CITK8
          Length = 251

 Score =  214 bits (546), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 1/235 (0%)

Query: 26  AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85
             + + T+  H H  GQL     G +    E   W + P    W+P  + H   +  +A 
Sbjct: 10  HHSSKHTTQWHHHPGGQLYWITRGMVMVETEQGQWALTPGSVGWLPPSLPHCAWMPVSAY 69

Query: 86  LCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ 144
              L          P++ C    SP    L+  +    T          L+QV+ DE+  
Sbjct: 70  GASLHFSVEYCGVFPSSPCVRAASPFLLLLLEKICGEGTIGEPSERLAHLLQVMVDEIRC 129

Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204
                  L +    ++R + + +        +  + A    +S R L+RL +++TGL+F 
Sbjct: 130 ADALSSQLILPDDRRVRQIAQKILADRACTRSQAELAKQAGLSVRTLSRLFIQQTGLTFG 189

Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
           QW+Q+ ++I +L+ L++G+ V  VA   GY++ +AFI +F++ +G TPG++  R 
Sbjct: 190 QWKQKAKVISSLEYLLRGEPVSLVAQLAGYENVSAFIAVFRRFMGMTPGQFYLRF 244


>UniRef50_A0KEB0 Transcriptional regulator, AraC/XylS family n=25 Tax=Proteobacteria
           RepID=A0KEB0_AERHH
          Length = 274

 Score =  214 bits (544), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 76/256 (29%), Positives = 139/256 (54%), Gaps = 4/256 (1%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           M   L  + ++PD+H  +A+      G  +  S  HQH++ QL+ A  G +T  +++ + 
Sbjct: 1   MAFILPDHPFDPDQHDGSAIGIASALGWHD--SGRHQHKRHQLLFAQAGCMTIELDDQVC 58

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120
           ++PP  A W+P G+ H   +        L+ +P    +PT    L ++PL RE+I  +A 
Sbjct: 59  LLPPTRAAWLPAGLPHRVLMRGVVAYRSLYFQPE-PGLPTEMAVLAVNPLLREIIERMAI 117

Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180
               + A       + +L +EL Q P++   LP+ S P++   ++ + +G      L + 
Sbjct: 118 WPWDKPAAE-QHCTLALLQEELAQAPRESWQLPLPSDPRLAGWLQEVKRGDTLPDRLNRL 176

Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240
           A     S++ + R+ ++ETG+S++ WRQQ +L+ AL+ L + + + +VA TL + S +AF
Sbjct: 177 AERVGASDKTIGRIFMRETGMSYQAWRQQWRLLRALELLAEAEPISRVAATLEFASDSAF 236

Query: 241 ITMFKKGLGQTPGRYI 256
           I+ F++  GQTP RY+
Sbjct: 237 ISFFRQHTGQTPLRYL 252


>UniRef50_C6DFV4 Transcriptional regulator, AraC family n=1 Tax=Pectobacterium
           carotovorum subsp. carotovorum PC1 RepID=C6DFV4_PECCP
          Length = 273

 Score =  213 bits (543), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 59/228 (25%), Positives = 115/228 (50%), Gaps = 9/228 (3%)

Query: 34  PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93
           P H+H++GQL+ A+ G +    ++  W++PPQ ++W+P    HS  + ++ EL  L+  P
Sbjct: 40  PSHKHKRGQLLYAVKGVMLVQTDSRQWVIPPQRSLWLPAEQWHSFTLLSHTELRTLYFTP 99

Query: 94  SAVTMP------TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147
           S V              + ++P  + LI +L  ++     + +   + Q+L   + +   
Sbjct: 100 SFVAETCGMKTLDHIHVIGMTPFAQHLISSLFEQSFNHSTQKL---IAQLLLRIVNETEA 156

Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207
             + L +    K+  + + +        +L ++A   AMSER  +R   ++TG SFR W+
Sbjct: 157 LPVDLAMPCDDKLHRVAQDILVNNRWNVSLSEFAELVAMSERTFSRYFTEDTGCSFRTWK 216

Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           Q+ ++ +++  L  G  V+ VA+ LG+   ++FI  F+   GQTP  +
Sbjct: 217 QRARIFVSMDLLSNGMPVKNVAYKLGFSCPSSFIAAFRTVTGQTPSCF 264


>UniRef50_A1VPE7 Transcriptional regulator, AraC family n=2 Tax=Comamonadaceae
           RepID=A1VPE7_POLNA
          Length = 280

 Score =  213 bits (543), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 82/273 (30%), Positives = 122/273 (44%), Gaps = 17/273 (6%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENAL- 59
           ++   + + + P    +  V     +   +     H H   QL     G +  T E    
Sbjct: 9   LISLGDTDPFTP--SPQRPVRVRSRSMAADTHLEPHTHAWAQLAYCATGVVQVTAEQTRP 66

Query: 60  ---------WMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA-VTMPTTCCTLKISP 109
                     ++PP  AVWI  G  H   V   AEL  L+++ SA       C  L +SP
Sbjct: 67  DQAQADEITCIIPPSRAVWIAPGARHHITVREAAELRTLYLDASATPPGWQGCRVLVVSP 126

Query: 110 LCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSS----HPKIRTMVE 165
           L REL+ +L + +     E  T+ L  ++ DE+     Q L +P+        ++R + E
Sbjct: 127 LLRELVHSLDDGSGQPLTEARTQWLSALVLDEITHADIQALGVPMPHPDSGDKRLRALCE 186

Query: 166 MMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTV 225
            + + P E   L  WA     SER +ARL   + GLS++QWRQQ  L  AL  L +G  V
Sbjct: 187 AVLRAPSERATLAGWAADIGASERTVARLFRDQLGLSYQQWRQQAILAHALPMLARGQPV 246

Query: 226 QKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
             VA   GY S +AF  MFK  +GQ P ++ A+
Sbjct: 247 GAVAAASGYASESAFSAMFKAAMGQPPSQFHAK 279


>UniRef50_UPI0001B55F3C AraC family transcriptional regulator n=3 Tax=Streptomyces
           RepID=UPI0001B55F3C
          Length = 271

 Score =  212 bits (541), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 4/224 (1%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
            H+H   QL  A  G +T  +    W++PP  A+WIP G  H+   T  A +  +++ P 
Sbjct: 42  RHEHSAHQLAWAAAGTLTVDIGAHSWVLPPTLALWIPAGTPHTTSATRPALMRSVYLLPR 101

Query: 95  AVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153
              +       + + PL RELI  LA+             L+    D L       + +P
Sbjct: 102 HSPVRRPGPTVVTVGPLLRELITHLADTPLEPGPRARAEALLP---DLLRPVEVTTIEVP 158

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
           +    +   + E +   P +  +L +W      S R LARL   ETGLSF +WR + +L 
Sbjct: 159 MPRDERALRVAEALVAHPADPRSLDEWGRLVGASARTLARLFSAETGLSFGRWRTRARLR 218

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
             L+ +     +  VAH +GY S ++F+  F+   G+TPG Y +
Sbjct: 219 AGLEHMAVNRPLTAVAHRVGYTSPSSFVAAFRHETGRTPGAYFS 262


>UniRef50_A6VY36 Helix-turn-helix-domain containing protein AraC type n=2
           Tax=Gammaproteobacteria RepID=A6VY36_MARMS
          Length = 258

 Score =  212 bits (539), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 70/258 (27%), Positives = 120/258 (46%), Gaps = 5/258 (1%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           M+   L  Y  DR   + +      G +E     H H   Q++  + G +  T+E+   +
Sbjct: 1   MNANELIQYFSDRQVVSKIINLPANGVEE----WHAHPWHQVLYPIAGLLQSTIESKSII 56

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLAN 120
           VP    ++IP    H +      +   +++ P S  +      +  ++P  +ELI+ L  
Sbjct: 57  VPHNGMLFIPANAIHKSVSVTKTQFLAVYLNPKSTESYGNNAKSCLVTPFLKELIVLLVK 116

Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180
           +     AE MT  L+ VL D++      ++ L + +  ++  +   + + P     L +W
Sbjct: 117 QGLDNHAEQMTTNLLCVLRDQIAIAESYEIPLLIPNDRRLMAIFVELNQQPDLALTLSEW 176

Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240
           A     S R L+RL  KE   SF  WRQ ++L+++LQ L K  ++Q +A  LGY S +A+
Sbjct: 177 ATKVGASPRTLSRLCAKEFNQSFAMWRQNIRLVLSLQLLEKNMSIQNIALDLGYQSDSAY 236

Query: 241 ITMFKKGLGQTPGRYIAR 258
           I  FK    QTP +Y  R
Sbjct: 237 IHAFKGLFAQTPSQYRKR 254


>UniRef50_A9BNM6 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria
           RepID=A9BNM6_DELAS
          Length = 310

 Score =  211 bits (538), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 116/256 (45%), Gaps = 16/256 (6%)

Query: 19  AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78
            V          L    H H   QL+ A+ G +     +  W+VPP   VW+  GV H  
Sbjct: 51  PVTGVAADYPAGLEVEEHSHECCQLLYAVQGVLEVRAGSGRWVVPPTRGVWLRSGVPHGL 110

Query: 79  QVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137
           ++    ++  LF++  +A  +P T C +++SPL RELI  +A    +         ++++
Sbjct: 111 RMRGAVQVRSLFVDAQAAADLPGTDCVIEVSPLLRELISEVARWPASAPPGRRESMVVEL 170

Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKG---------------PVEWGALGQWAG 182
           L  EL Q P    HLP     ++  +   +A+G                        WA 
Sbjct: 171 LLQELRQPPVVPFHLPWPQDARMAAVCHALAEGEGADGFATAAAAADIGAATATAADWAA 230

Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242
             AM E+   R  ++ TG+SF +WRQ+ +L+ ++Q L+ G  + +VA   GY+S +A+  
Sbjct: 231 RLAMGEKTFHRHFLQATGMSFGRWRQRARLLSSMQALLAGRPIVQVALEAGYESHSAYSL 290

Query: 243 MFKKGLGQTPGRYIAR 258
            F++  G  P  + AR
Sbjct: 291 AFRRQFGMPPSAFGAR 306


>UniRef50_C8QCP4 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b
           RepID=C8QCP4_9ENTR
          Length = 259

 Score =  211 bits (538), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 1/226 (0%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
            H H  GQ+I      +   VE    + P    +WIP G  HS+     +      +   
Sbjct: 33  PHAHAWGQVIFVKSHVLEMEVEGERLLTPADMPIWIPPGHRHSSYNHRQSLFRTFNLATD 92

Query: 95  AVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153
               +P   C L +  +   ++   A R   Q       RL +VL D L   P Q+ +LP
Sbjct: 93  LCDGLPQQACLLNVDTIVHAIMDEFARRGLEQPLSDADWRLCEVLGDRLRLAPVQKSYLP 152

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
            S+   +  ++  +   P +   L QWA     +ER LAR   ++  +SF +WRQ+L+ +
Sbjct: 153 GSNDKLLAPILHALQVHPGDNTTLAQWAKRVFTTERTLARRCQQQLNMSFSEWRQRLRFL 212

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
            A+  L +G +VQ +AH LGY S +A I MF+   G TP RY +RL
Sbjct: 213 RAITLLEQGISVQAIAHELGYSSASALIVMFQHQAGTTPDRYRSRL 258


>UniRef50_B1LVX0 Transcriptional regulator, AraC family n=3 Tax=Rhizobiales
           RepID=B1LVX0_METRJ
          Length = 272

 Score =  211 bits (538), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 64/232 (27%), Positives = 102/232 (43%), Gaps = 1/232 (0%)

Query: 19  AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78
            VA         +    H H + QL+ A  G +    ++  W+VP  +A+WIP  + H+ 
Sbjct: 30  PVAVMPKTYAAGMHLDRHFHPRAQLLYATSGLMMAFADDGTWVVPEGHALWIPPRLPHAV 89

Query: 79  QVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137
                  +C  +++P+AV   P +C  + +S L    +  LA        +     L  +
Sbjct: 90  ATHGAVSMCSAYLDPAAVRSFPASCRVIAVSRLMASALTALAEEPVLYAVDGRGGHLAAL 149

Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197
           + DE+ + P   L LP+   P++R +   + + P     L  WA     S R L R    
Sbjct: 150 VLDEIGRAPATPLALPLPRDPRLRRVCLALIEDPASEADLDAWADRAGASRRTLTRGFRA 209

Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
           ETGLSF  WR + ++I AL    +G   + VA  +GY S  A  T   + LG
Sbjct: 210 ETGLSFGDWRARARVIRALALAAEGRPPRAVAAAVGYRSAQALRTTVARVLG 261


>UniRef50_Q7NRZ6 Probable transcriptional regulator AraC family n=1
           Tax=Chromobacterium violaceum RepID=Q7NRZ6_CHRVO
          Length = 247

 Score =  211 bits (537), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 2/226 (0%)

Query: 33  SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92
           +  H H +GQL  A  GA+    +    ++P     WIP G+ H            L +E
Sbjct: 22  TARHSHAEGQLAWASAGALELDADGRRILLPGGCVGWIPPGMPHGAHYHGELRGWSLQLE 81

Query: 93  PSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151
            + +  +P      + SPL + +   L +       +   RRL+ VL DEL         
Sbjct: 82  AACLPALPPDLRVWRASPLLQGVFQRLGDWPEQAGPDA-ARRLVAVLADELAWAEPYPAS 140

Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211
           L   SHP +R + E +++ P     L +WA    MS R+L R    ETG+   +WR++L+
Sbjct: 141 LAWPSHPALRKLAEALSRDPSLDWDLERWARQIGMSRRSLIRHFRAETGMGVAEWRERLR 200

Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           ++ A   L +G +V   A  LGY  ++AFI  F++  G+TPGRY++
Sbjct: 201 MLRARALLAEGRSVGYCAAELGYAGSSAFIVAFRRCFGETPGRYLS 246


>UniRef50_Q7CRR0 Transcriptional regulator, AraC family n=4 Tax=Rhizobiaceae
           RepID=Q7CRR0_AGRT5
          Length = 284

 Score =  211 bits (536), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 67/252 (26%), Positives = 117/252 (46%), Gaps = 2/252 (0%)

Query: 13  DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72
           D  +E  +A           +P H H + Q+  A  G +  +  +  WM+PP + + IP 
Sbjct: 25  DGTNEPVLALH-RVYPTGHRTPPHSHSRVQIWCARQGVVLVSTADGRWMIPPGHGLLIPA 83

Query: 73  GVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTR 132
           G++H  ++ +N E+  +++ P       +   ++I+ L   LI  L        A     
Sbjct: 84  GLQHEAEIISNVEMHSIYVHPELFQA-ESPKVVEITDLASSLISELLAEEHQPSAFHRQG 142

Query: 133 RLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192
            +  +L DE+ + P++ L LP   + ++  +     + PV    + +WA   ++S R+  
Sbjct: 143 LVRALLLDEVNRLPERPLGLPFPDNQRLAALCRDFLRKPVARVEIDEWAAAMSISRRSFT 202

Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252
           RL  +E G+SF  WRQQ  +  +L  L  G+ V  VA   GY++  AF TMF++ LG +P
Sbjct: 203 RLFRRELGVSFVTWRQQACIFASLPRLAAGEAVTNVALDAGYENIPAFTTMFRRMLGSSP 262

Query: 253 GRYIARLTTVSP 264
             Y       S 
Sbjct: 263 RAYRQAARQRSA 274


>UniRef50_Q13VV8 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria
           RepID=Q13VV8_BURXL
          Length = 268

 Score =  211 bits (536), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 2/224 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H+H   Q + A +G +          +PP Y VWIP G  H+  +    EL  L+IEP+A
Sbjct: 41  HEHVWWQFLFARNGLMQVQAGATTLTLPPDYGVWIPPGCVHTLWIGEEVELESLYIEPTA 100

Query: 96  VTM-PTTCCTLKISPLCRELILTLAN-RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153
           V +       + +    R  I             +    R ++VL D L   P    +LP
Sbjct: 101 VAIQDQEPRVVMVDEFVRAFIHHGCTSIPVKYDEDGADGRKVKVLLDSLQSLPDAPFNLP 160

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
             + P++  +   +   P     L + AG   MS R   R  ++ TGL +  WRQ+++L+
Sbjct: 161 FPTEPRLLEVCLTIQSAPHLAHTLDESAGLARMSSRTFTRHFLRATGLPYHTWRQRMRLL 220

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
            +L+ L    TV +VA T+GY + +AF   FK+  G++P R+  
Sbjct: 221 GSLEMLRSDITVTEVALTIGYSTPSAFTHAFKQLFGKSPSRFTR 264


>UniRef50_A8G994 Transcriptional regulator, AraC family n=12 Tax=Gammaproteobacteria
           RepID=A8G994_SERP5
          Length = 255

 Score =  209 bits (533), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 71/251 (28%), Positives = 123/251 (49%), Gaps = 9/251 (3%)

Query: 8   NGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYA 67
           + ++PD  + + +   I A   +  S  H H  GQL+ +  G +  T+  ++ ++PP   
Sbjct: 8   DEFDPDAINNSVLG--IAAELAQHDSGPHWHNMGQLLFSQRGCMRITLNESICLLPPARI 65

Query: 68  VWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQR 126
            WIP  V H  QVT  A    ++++      +      L  S L RE++  +A    T +
Sbjct: 66  AWIPPLVVHRVQVTGVAGYRSVYLDNHRYPGLSPHLEVLSASSLLREVLERIALADFTTQ 125

Query: 127 AE-PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185
            E   +  ++ V  DE+    ++   LP+    ++R +  M    P     L + A +  
Sbjct: 126 WESGPSANILAVCLDEIRHAQRELTLLPLPKDRRLRQLAGMEEVPP-----LNELARYSG 180

Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245
            SE+ ++R+  KETGLS++QWRQQ +LI A++ L +G  +  +A  L + S +AF T FK
Sbjct: 181 ASEKTISRIFRKETGLSYQQWRQQWRLIKAIELLAEGYGLSDIAGKLEFSSDSAFSTFFK 240

Query: 246 KGLGQTPGRYI 256
              G +P  Y+
Sbjct: 241 NMTGSSPRAYM 251


>UniRef50_B4SMW0 Transcriptional regulator, AraC family n=3 Tax=Stenotrophomonas
           RepID=B4SMW0_STRM5
          Length = 265

 Score =  209 bits (532), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 67/250 (26%), Positives = 119/250 (47%), Gaps = 2/250 (0%)

Query: 7   LNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQY 66
           L+    D      V            +  HQH +GQL+ A  G +    ++  W++P  +
Sbjct: 10  LDPALADAADGPVVLAARLRQHGMRRTARHQHARGQLLGAQQGLLRIAADDLHWLLPAGH 69

Query: 67  AVWIPGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQ 125
             WIP  + H+       +   L+    A   +P+T    + + L +   +    R   +
Sbjct: 70  VAWIPPLLPHALLSADGFDGWSLYFNAEACLGLPSTPRIFQPNALLQAATIRA-LRWPHR 128

Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185
             +    RL  V+ DE+       L LP     +++ +   +A+ P +  ++  WA    
Sbjct: 129 PLDAAQARLAGVIADEIAASTPLPLALPQPRDRRLQKIAAALARAPHDNRSIEDWATRSG 188

Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245
           +S R+LAR  + ET ++  QWRQ+L++++AL  L+ G+ V  VA ++GYD+ +AFI +FK
Sbjct: 189 LSSRSLARHWLAETHMTLSQWRQRLRVLLALPRLLSGEPVISVALSMGYDTPSAFIAVFK 248

Query: 246 KGLGQTPGRY 255
           + +G TP RY
Sbjct: 249 REMGVTPARY 258


>UniRef50_B4EHM1 AraC family regulatory protein n=5 Tax=Burkholderia cenocepacia
           RepID=B4EHM1_BURCJ
          Length = 271

 Score =  209 bits (532), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 77/233 (33%), Positives = 117/233 (50%), Gaps = 6/233 (2%)

Query: 26  AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85
           A         H H+ GQL+    G +   VE   W+ PP  A+WIP    H+ +V  + +
Sbjct: 35  ARALAHEYAPHAHQAGQLLFTTRGVLVLDVEGQRWITPPLRAIWIPARTVHAMRVADDVQ 94

Query: 86  LCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLAN-RTTTQRAEPMTRRLIQVLFDELP 143
           LC L++ +     +P T C + +SPL REL   +++    +   +P    L ++  DEL 
Sbjct: 95  LCSLYLGDALGARLPATLCAMTVSPLLRELATRVSHPFDCSVDHDP----LARLFADELS 150

Query: 144 QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203
           +  Q  L LP+    ++  + E + + P     L   A   A+S R+LARL   ETG+S 
Sbjct: 151 ELAQTPLTLPLPRDRRLLKLCERLQREPHCELPLDTLARDAALSARHLARLFRSETGMSV 210

Query: 204 RQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
             WRQQL+L M+L  L  G  V + AH +GY S T +   FK+  G TP +Y+
Sbjct: 211 AAWRQQLRLSMSLALLASGMPVTQAAHQVGYRSPTTYAATFKRAFGVTPSQYL 263


>UniRef50_D1VDY4 Transcriptional regulator, AraC family n=1 Tax=Frankia sp. EuI1c
           RepID=D1VDY4_9ACTO
          Length = 322

 Score =  208 bits (530), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 61/263 (23%), Positives = 110/263 (41%), Gaps = 10/263 (3%)

Query: 18  AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77
            A+        + L +P H H   Q+  A+ G +        +++PPQ A W+P G+ H 
Sbjct: 58  DALGGGYMYEGERLVTPWHSHDLHQIEYAMSGVVEVETAGGRYLLPPQQAAWLPAGLSHQ 117

Query: 78  NQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRT-----TTQRAEPMT 131
             +        +  +P  V  P      + +SPL RE+IL           +   ++   
Sbjct: 118 ATMNTAVRTVSVMFDPRIVPRPGDRARIVAVSPLIREMILYALRWPIARTESDDVSDGFF 177

Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191
           R L  ++ + +    +  L LP S+ P +   +    +           +    +SER L
Sbjct: 178 RTLAHLVAEAIDH--EAPLSLPTSADPLVAAAMAHTRENLG-TVTAATVSRAIGVSERTL 234

Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250
            R    E G+S+R +  Q +L+ A+  L + G +V  V+  +G+++ +AF   F   +G+
Sbjct: 235 RRQFAAELGMSWRAYLLQARLLRAMALLAEPGPSVLDVSLAVGFENVSAFARAFALRVGE 294

Query: 251 TPGRYIARLTTVSPQSAKPDPRQ 273
           TP  Y  R+         P PR+
Sbjct: 295 TPSAYRRRVAADPKPIGGPAPRE 317


>UniRef50_C1A6S8 AraC family transcriptional regulator n=1 Tax=Gemmatimonas
           aurantiaca T-27 RepID=C1A6S8_GEMAT
          Length = 286

 Score =  208 bits (530), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 73/238 (30%), Positives = 115/238 (48%), Gaps = 6/238 (2%)

Query: 39  RKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI-EPSAVT 97
             GQLI A  GAI+  V  +LW+VP +  +W+P    H  ++     L  +FI    A  
Sbjct: 38  DWGQLIWASRGAISVMVGQSLWLVPARSGLWLPPATTHDVRMIGRGVLRLVFIARARARA 97

Query: 98  MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSH 157
           +P T     ++PL RE++  +  R T   A+P   RL+ VL DEL +       LP+ + 
Sbjct: 98  LPKTPAVRALTPLLREILRRVLARDTLTTADPRDGRLLGVLVDELSEVSPAPFDLPMPTD 157

Query: 158 PKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQ 217
           P+      ++ + P +       A     S R L R+   ETGL+F  WR + +L+ A+ 
Sbjct: 158 PRAIRAAALVREHPAQPPDAITIARHAGASVRTLERVFRAETGLAFGAWRLRARLMHAMI 217

Query: 218 GLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY-----IARLTTVSPQSAKPD 270
            L  G++V +     G+  T+AF+  F++  G TPG Y      +R + VS Q+  P 
Sbjct: 218 LLANGESVTRTGIAAGFAGTSAFVHAFRRTTGTTPGAYATPGVRSRTSPVSSQTGVPS 275


>UniRef50_D2BBL9 Transcriptional regulator, AraC-family n=18 Tax=Actinomycetales
           RepID=D2BBL9_STRRD
          Length = 278

 Score =  207 bits (527), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 7/255 (2%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
           H    +  +           H H + Q++ A  G ++ T +   W+ P   A+WIP G  
Sbjct: 6   HNPRASTGLRPLPAGAGIDAHWHDENQIVYAGRGVLSVTTDAGSWIAPAIRAIWIPAGTV 65

Query: 76  HSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134
           H ++   + +L  + +      +       + + PL RELI+T   +     AE   RRL
Sbjct: 66  HEHRAYGDTDLHLVGLPVKDNPLRLDQPAVISVGPLLRELIITYTEQPADLTAE--RRRL 123

Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
             VL D L    QQ +H+P +  P++  +  ++   P +   L +      +S+R L RL
Sbjct: 124 RAVLLDRLRHSAQQPVHVPAARDPRLVAVCAILRDNPADNRTLARLGAVAGVSDRTLTRL 183

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
              E G+SF QWR QL+L  AL  L +   V  VAH  G+ S++AFI +F++  G TPG 
Sbjct: 184 CRAELGMSFPQWRTQLRLHYALLLLAEDTPVTAVAHRCGWASSSAFIDVFRRAFGHTPGT 243

Query: 255 YIARLTTVSPQSAKP 269
           + A    +SP +  P
Sbjct: 244 HRA----LSPTATAP 254


>UniRef50_Q8EHW8 Transcriptional regulator, AraC/XylS family n=3
           Tax=Gammaproteobacteria RepID=Q8EHW8_SHEON
          Length = 259

 Score =  207 bits (527), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 76/258 (29%), Positives = 124/258 (48%), Gaps = 1/258 (0%)

Query: 4   RLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63
           R   +    D+   A + F   A      +P H+H  GQL L   G +        ++ P
Sbjct: 2   RPVYHPLSSDQLPVADIFFNYEAFLPNTITPKHRHNWGQLQLISGGIMELHASGQRFLSP 61

Query: 64  PQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRT 122
            QYA+W+P GVEH +    +   C L I  +     P   C L ++P+ + ++  L  R 
Sbjct: 62  SQYAIWVPAGVEHESYTRRSIHYCSLNIVANRAQVFPDVTCLLAVTPIAQAIVNDLRQRQ 121

Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182
                    +RL++VL D+L     Q   LP S+   ++ +++ +   P    +L  WA 
Sbjct: 122 VRVAQTDADKRLVEVLIDQLILGQAQPQFLPSSTDKLLQPILQQLELEPASQKSLKSWAS 181

Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242
               +ER LAR      G+SF + RQ+ + I +LQ L +G ++++VA TLGY+ T+ +I 
Sbjct: 182 ELHTTERTLARRCQNCLGMSFTELRQRHKFIYSLQLLREGLSIKEVALTLGYNQTSPYIV 241

Query: 243 MFKKGLGQTPGRYIARLT 260
           MFKK    +P +Y  +L 
Sbjct: 242 MFKKYAQYSPEQYRRQLA 259


>UniRef50_C9PF82 Substrate-binding transcriptional regulator AraC family protein n=1
           Tax=Vibrio furnissii CIP 102972 RepID=C9PF82_VIBFU
          Length = 274

 Score =  207 bits (527), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 71/244 (29%), Positives = 116/244 (47%), Gaps = 2/244 (0%)

Query: 14  RHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGG 73
             H+A +   IH     +    H H   Q+I  L G +  ++EN   +VP    ++IP  
Sbjct: 10  SPHQAFITKTIHMRAGYID-DFHTHPWHQIIFPLSGLLQSSIENRSVIVPHNAMLYIPAD 68

Query: 74  VEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTR 132
             H +    + +   +++ P S V       +  ++P  + LIL L NR+T  +      
Sbjct: 69  TVHKSVSVTDTQFLAMYLNPKSGVNYGVEAKSCLVTPFLKALILLLFNRSTQAQPPENLI 128

Query: 133 RLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192
            L+ VL D++    Q  + L +    +++ + E +   P    +L +WA     SER L+
Sbjct: 129 HLLTVLRDQIDTAGQYAIPLLIPRDKRLKAIFEQLTAQPDVKFSLNEWAKHVGASERTLS 188

Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252
           RL  KE   SF  WRQ ++L+++LQ L    T+Q +A  LGY S +A+I  FKK    TP
Sbjct: 189 RLCAKEFDQSFSLWRQNVRLVLSLQLLSTPRTIQDIALELGYASDSAYIYAFKKLFHHTP 248

Query: 253 GRYI 256
            +Y 
Sbjct: 249 SKYR 252


>UniRef50_C7I316 Transcriptional regulator, AraC family n=1 Tax=Thiomonas intermedia
           K12 RepID=C7I316_THIIN
          Length = 291

 Score =  207 bits (526), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 5/244 (2%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
            H H +G L L   G +         + P Q   W+P GVEH+ Q          F+ P 
Sbjct: 45  THCHARGTLFLLTEGLVIVETAQGRQLSPSQTIGWMPPGVEHAVQSYGPTAGFGAFLTPQ 104

Query: 95  AV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153
               +P    +  ++PL   ++    +       +    RL+ VL DEL Q P + L LP
Sbjct: 105 FCGDLPAEPTSYPVNPLVALVLQKALSWPHDTPLDLTRMRLLLVLLDELRQSPARPLQLP 164

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
                ++ ++   +         L QWA +  +S R+L+R  V ETG+SF QWRQ  +L 
Sbjct: 165 WPQDARLLSIARALLGNIASPRTLEQWARWADISARSLSRKFVLETGMSFAQWRQWARLT 224

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI----ARLTTVSPQSAKP 269
            AL+ L  G  V+ VA +LGYDS +AFI  F++ LG TP  Y      +   ++P+ A  
Sbjct: 225 QALEWLATGRAVKDVALSLGYDSVSAFIKTFRQALGTTPSAYFQTQQRKQAALNPRVAAD 284

Query: 270 DPRQ 273
              Q
Sbjct: 285 QEAQ 288


>UniRef50_Q0B8S9 Transcriptional regulator, AraC family n=1 Tax=Burkholderia
           ambifaria AMMD RepID=Q0B8S9_BURCM
          Length = 261

 Score =  206 bits (525), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 69/230 (30%), Positives = 101/230 (43%), Gaps = 1/230 (0%)

Query: 32  TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91
            SP H H  GQL+    GA      + L  + P  A WIP  + HS  +        ++I
Sbjct: 29  ESPRHVHSCGQLLYPERGAALLETPHHLVRLGPGQAAWIPPDLPHSILMGRPYRYHSVYI 88

Query: 92  EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151
                  PT      +SPL +ELIL       T  +  +     +V+  E+ + P+    
Sbjct: 89  GAGLYAEPTF-SVSHVSPLLKELILDAERWDDTDASSDVRFWKTRVIVAEIRRAPRVAAG 147

Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211
           +P+   P+I  +   +   P +   LG WA     SE+ L R  VK TGLSF+QWR   +
Sbjct: 148 MPIPDDPRISVICRALEIDPADARMLGDWARQVGASEKTLQRAFVKSTGLSFQQWRTHAR 207

Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTT 261
           +  AL     G  +  VA  +GY S  A+   F++  G +PGR   R T 
Sbjct: 208 MTKALAMHRCGARLLDVAVAVGYSSEGAYAHAFRQFYGYSPGRMKPRSTG 257


>UniRef50_D1BGA1 DNA-binding domain-containing protein, AraC-type n=1
           Tax=Sanguibacter keddieii DSM 10542 RepID=D1BGA1_SANKS
          Length = 293

 Score =  206 bits (524), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 61/231 (26%), Positives = 108/231 (46%), Gaps = 6/231 (2%)

Query: 26  AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85
           +G D   S  H H   +L+    G +T    +  +MVP    +WIP GV H+ Q      
Sbjct: 28  SGPDRWDS--HSHDVHELLWGAEGVLTVETADGYFMVPAVLGLWIPAGVAHAVQCAGGTG 85

Query: 86  LCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ 144
               +++             + ++PL REL++ +A           +  L   L + +  
Sbjct: 86  FWCTYVDADVRPEFTGRTTAVTVTPLLRELLVHMAAEPMRAEVRDASAALAVALLEAVDM 145

Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204
            P     LP+ +  ++ ++   +   P +  +L  W    ++S RNL+RL  +ETG++F 
Sbjct: 146 SPMV---LPMPTDARLASIARALLDDPGDRRSLDDWGTEVSVSVRNLSRLFHRETGMTFA 202

Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           QWR   ++ +A+  L  G +V  V+  +GY + +AF+  F++ LG TPG Y
Sbjct: 203 QWRVHARVRLAVGLLASGLSVGTVSRRVGYSTPSAFVQSFRRVLGHTPGWY 253


>UniRef50_A0KTL0 Transcriptional regulator, AraC family n=25 Tax=Gammaproteobacteria
           RepID=A0KTL0_SHESA
          Length = 292

 Score =  206 bits (524), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 70/230 (30%), Positives = 116/230 (50%), Gaps = 8/230 (3%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
           +H+H   QLIL L G +      AL++VP   A+++P GV H +    +     +++ P 
Sbjct: 57  LHKHCWHQLILPLQGLLQTEANGALFLVPHTTALFVPAGVIHESVAITDTCFIGVYLNPM 116

Query: 95  A-VTMPTTCCTLKISPLCRELILTL-------ANRTTTQRAEPMTRRLIQVLFDELPQQP 146
                  T   + +S   REL+LT+        +      A P  +RL++VL+D++    
Sbjct: 117 CGRDYGATIKPVAMSAFLRELVLTIRKQCVFNTSMNVEPIALPTIQRLLEVLYDQINSAE 176

Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206
            Q   L +    +++ + E + + P    +L +W      SER L+RL V+E G SF  W
Sbjct: 177 GQTFKLLIPQDRRLKLIFEHLTQTPALDLSLAKWGEMVGASERTLSRLFVREFGSSFGLW 236

Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           RQ L+LI +L  L    ++Q VAH +GY + +++I  FK+  G TP R+ 
Sbjct: 237 RQHLRLIYSLSLLATNLSIQNVAHQIGYQNDSSYIKAFKERFGMTPQRFR 286


>UniRef50_Q3JG82 AraC family regulatory protein n=50 Tax=Proteobacteria
           RepID=Q3JG82_BURP1
          Length = 902

 Score =  206 bits (524), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 79/259 (30%), Positives = 123/259 (47%), Gaps = 3/259 (1%)

Query: 14  RHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGG 73
                 VA        E T+  H H +GQL+ A  G ++  +++  W+VP  +AVWIP  
Sbjct: 102 SSEGPFVAAVELTQRTERTTARHSHARGQLVGASSGLVSIGLDDEDWVVPAIHAVWIPPH 161

Query: 74  VEHSNQVTANAELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTR 132
             HS +         +F+ E     +P     + +S L RE +   A+       +    
Sbjct: 162 RVHSLRSFGPFAGWSVFVAEDRCAALPGAPRAIVMSTLLREAVRRAASW-RGAALDAARA 220

Query: 133 RLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192
           R+  V+ DE+         LP    P++R + + +A    +     +WA +  M+ R L+
Sbjct: 221 RIANVILDEIAAAQTGPRGLPRPRDPRLRRIADALAGDLADNRRADEWAAWAGMAPRTLS 280

Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252
           R  V ETG +F QWRQQ +++ AL+ L  G TV  VA  LGYD+ +AFI MF++ LG TP
Sbjct: 281 RRFVSETGFTFTQWRQQARVLRALERLADGVTVTAVALDLGYDNVSAFIDMFRRTLGTTP 340

Query: 253 GRYIARLTTVSPQSAKPDP 271
           G+Y+        +   P P
Sbjct: 341 GQYV-NARAGDARDGAPAP 358


>UniRef50_A5U9G2 AraC-family transcriptional regulator n=12 Tax=Mycobacterium
           tuberculosis complex RepID=A5U9G2_MYCTA
          Length = 263

 Score =  206 bits (524), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 66/229 (28%), Positives = 111/229 (48%), Gaps = 4/229 (1%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
                   H+H   Q++    GA++ T     W+ P   A+WIP G  H ++   + +  
Sbjct: 17  PPGARIERHRHPSHQIVYPSAGAVSVTTHAGTWITPVNRAIWIPAGCWHQHKFHGHTQFH 76

Query: 88  FLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146
            + ++P      P T   L ++PL REL++  +    T   E    R++ VL D+LP   
Sbjct: 77  GVALDPQRYRGGPATPTVLAVNPLMRELVIACSQADRTDTDE--HHRMLAVLQDQLPTTS 134

Query: 147 -QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
            ++ L +P  +  ++R    ++A    +   L Q  G   +S+R L+RL   E G++F Q
Sbjct: 135 IREPLWVPSPTDRRLRHACALIADNLTQPLTLQQIGGRIGVSQRTLSRLFSDELGMTFPQ 194

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
           WR QL+L  AL  L +   V  VA   G+ + +AFI  +++  G TPG+
Sbjct: 195 WRTQLRLQHALVLLAERHDVTSVASECGWATPSAFIDTYRQAFGHTPGQ 243


>UniRef50_A8L2S5 Transcriptional regulator, AraC family n=3 Tax=Actinomycetales
           RepID=A8L2S5_FRASN
          Length = 263

 Score =  205 bits (522), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 72/231 (31%), Positives = 100/231 (43%), Gaps = 4/231 (1%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
           TD      H H   QLI    G +        W+VPP  AVW+P GV H++Q      + 
Sbjct: 32  TDRERIDWHDHTDHQLIYPGTGVLRVVTRVGSWVVPPLRAVWLPAGVAHAHQAHGPTHMH 91

Query: 88  FL-FIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146
            L F +            + +  L RE+I  L   T T  A    R L  VL   L    
Sbjct: 92  SLAFSDVDDPFGSPDPTVVAVPALLREIIRAL---TATGLAGADRRDLTAVLLRSLRPVT 148

Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206
           + +L LP     ++  +   +A  P +   L +       SER L+RL  ++TG++F QW
Sbjct: 149 ELRLCLPQPRDDRLVALTAALAADPADPRTLAELGAAVGASERTLSRLFRRQTGMTFPQW 208

Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           R QL+L   L  L  G+ V  VA   GY + +AF   F+   G TP RY  
Sbjct: 209 RAQLRLHHGLTLLAGGEPVTTVAFACGYSNPSAFTAAFRDAFGVTPARYAR 259


>UniRef50_Q5FU43 Transcriptional regulator, AraC family n=1 Tax=Gluconobacter
           oxydans RepID=Q5FU43_GLUOX
          Length = 259

 Score =  204 bits (520), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 1/229 (0%)

Query: 30  ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89
              +  H H +GQ+     G +    E+A W++ P   +W+P  + H  +         L
Sbjct: 26  RRIAERHAHARGQIFGIESGVMAIRTEHAYWLIGPGQCLWLPPHIPHEARSHGAVAGWSL 85

Query: 90  FIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQ 148
           ++  +  + +P        + L   L   L++     R +     L +  + E    P+ 
Sbjct: 86  YVSAARCSNLPDEPFLAGGTRLLTALADRLSHDADETRWDAQISCLAECFWHEFLAAPRA 145

Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208
            + LP     +   +   ++  P +      WA   AMS R+  R    ETGL F  WRQ
Sbjct: 146 SVSLPFPKSEQFCRVANTLSDNPADNRDQKDWAELAAMSLRSFVRHFTLETGLPFSVWRQ 205

Query: 209 QLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           +L+++ A + L +G++V  VA  +GY+S  AF T F K  G  P  Y  
Sbjct: 206 RLRILNAQEKLARGESVASVALDVGYESLGAFATAFHKNTGYRPSDYAR 254


>UniRef50_B5XX95 Transcriptional regulator, AraC family n=7 Tax=Enterobacteriaceae
           RepID=B5XX95_KLEP3
          Length = 266

 Score =  204 bits (519), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 66/231 (28%), Positives = 115/231 (49%), Gaps = 9/231 (3%)

Query: 32  TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91
             P H H +GQL+ A  G +    E+  W++PPQ A+W+P    HS  + +  +L  ++ 
Sbjct: 38  VDPPHHHVEGQLLFATRGVMLVQTESDRWVIPPQRALWLPPLHIHSYHLLSQTDLRAVYF 97

Query: 92  ------EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
                 E ++ T       +  +PL +ELI  L    +   A P  R++  +L + L + 
Sbjct: 98  SSSLIAECTSFTKSQQVHVITATPLVKELIAGLF---SEDYARPSQRKIALLLLEILSEA 154

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
           P   + LP+ +  ++ +    +        +L + A   AMSER  +RL +K+TG SFR 
Sbjct: 155 PPLTMALPMPNDERLFSAARSLLVNQRWEASLSELAFMSAMSERTFSRLFMKDTGFSFRT 214

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           W+Q+ ++  +L  L  G  +++VA+ LG+    AF   F+  LG TP  ++
Sbjct: 215 WKQRARICASLDLLTNGVPIKQVAYQLGFSCPAAFTAAFRCILGATPRDFV 265


>UniRef50_Q5LMG8 Transcriptional regulator, AraC family n=1 Tax=Ruegeria pomeroyi
           RepID=Q5LMG8_SILPO
          Length = 238

 Score =  204 bits (518), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 65/232 (28%), Positives = 97/232 (41%), Gaps = 2/232 (0%)

Query: 19  AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78
            V        D   S  H+H + QLI A+ G +    +     +PP Y + +P    H  
Sbjct: 7   DVVGYARDYRDGYVSVRHRHPRHQLIYAISGLMMAETDAMSHAIPPGYGLIVPAQQPHEI 66

Query: 79  QVTANAELCFLFIEPSAVTMPT--TCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136
           ++     L  L++            C  + ISPL  +LI  L          P    L Q
Sbjct: 67  RMIGAVRLQSLYVRAGLPRADALARCRLVTISPLLAQLIAALCEMANPWPMPPRALHLSQ 126

Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196
           ++  EL   P   L LP  + P++R + + +   P    +L  WA    MS R  +R   
Sbjct: 127 LILIELLAAPVSPLALPYPTDPRLRRVCDGLIATPASPRSLDDWAAEAGMSRRTFSRHFQ 186

Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGL 248
            ETGLSF +W Q+L+   AL+GL KG    +VA  LGY +      M ++  
Sbjct: 187 LETGLSFGKWAQRLRCQAALRGLAKGRPAARVARELGYANAYTMAAMMRRMT 238


>UniRef50_D0L975 Helix-turn-helix-domain containing protein AraC type n=3
           Tax=Corynebacterineae RepID=D0L975_GORB4
          Length = 259

 Score =  202 bits (515), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 3/231 (1%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
                   H H   Q++ A  G +  T +   W+ PP  A+WIP    H ++   N E  
Sbjct: 27  PGGHRIARHHHLTHQIVYASSGLVEVTTQAGTWVAPPDRAIWIPALAWHEHRFYGNTEFN 86

Query: 88  FLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146
            + IEPSA          + ++ L RELI+  +   T+    P  +RL  VL D+L +  
Sbjct: 87  CVSIEPSARPFADDAPVVVAVTGLVRELIVEGSR--TSDPTCPAQQRLRSVLLDQLRRTD 144

Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206
           +  L L   S  ++     ++        +L         S+R L+RL+  E GL++ QW
Sbjct: 145 ETALSLRTPSDDRLVHACAIVTADLTRNHSLADLGRTVGASKRTLSRLLRDELGLTYPQW 204

Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           R  ++L  AL  L +G  V +VAH  G+ + +AFI  +++ LG TPG   A
Sbjct: 205 RTSVRLHRALILLAEGAGVTEVAHRCGWATPSAFIDAYRRVLGHTPGSRRA 255


>UniRef50_B0TZR0 Transcriptional regulator, AraC family n=1 Tax=Francisella
           philomiragia subsp. philomiragia ATCC 25017
           RepID=B0TZR0_FRAP2
          Length = 264

 Score =  202 bits (515), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 80/258 (31%), Positives = 131/258 (50%), Gaps = 2/258 (0%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           M   L  + ++   +  A +            S  H H + QLIL   G I   VE  +W
Sbjct: 1   MQDTLTTD-FDLSSYPNALIVLKSQIKDCNEESEYHSHSEAQLILPTKGLIQSNVEAKIW 59

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIE-PSAVTMPTTCCTLKISPLCRELILTLA 119
            VP   A+WIP  V HSN +T   ++C  F++    V MP   C L ISPL +ELIL L+
Sbjct: 60  AVPLGSALWIPSYVYHSNLITKGGQMCMTFVDKLMLVNMPKKACVLYISPLIKELILYLS 119

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
            +T  ++     +++  VL D+L +      +  + S   ++ +       P ++  +  
Sbjct: 120 QQTVLEQLNYENQKIASVLIDQLSKMLPTFYNFSLPSEKILQEVAFQWLSKPTKYKYISD 179

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
            A   ++S + LAR I K+ G++F  W++QL +++ALQ L +G +V  V+  LGY+ST+ 
Sbjct: 180 MAYECSVSSKTLARKIKKDIGMNFSDWKKQLHIVVALQKLYEGYSVNWVSEYLGYESTST 239

Query: 240 FITMFKKGLGQTPGRYIA 257
           F+T FK+    +P RY+ 
Sbjct: 240 FVTFFKRIFKCSPKRYVK 257


>UniRef50_A0R133 Transcriptional regulator, AraC family protein n=1
           Tax=Mycobacterium smegmatis str. MC2 155
           RepID=A0R133_MYCS2
          Length = 257

 Score =  202 bits (515), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 3/247 (1%)

Query: 13  DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72
           D      +A        E+ +P H+HR+ Q +  + G +    E+  W+VP + AV IP 
Sbjct: 9   DNLARDVLALATDYSYGEVLAP-HRHRRAQFLYGVGGTMDVRTEHGSWLVPTERAVLIPP 67

Query: 73  GVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131
             +H+  +        L+IEP AV   PT C  + +  L REL++        +  +   
Sbjct: 68  QTQHAVTMWG-VSTRSLYIEPGAVPWFPTRCTVVDVPTLLRELLVAAVAVPLDRPPDARD 126

Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191
             L  +   E+       L LP+     +          P      G WA    +SER +
Sbjct: 127 AALFALTLHEVAGCTSLPLDLPLPQPGALSEQCRRFLAAPRIDTTTGWWANALHVSERTV 186

Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251
           ARL  KE  ++  +W+++  ++ +L+ L +G  V  VA  LGY S  AF TMF + LG +
Sbjct: 187 ARLFRKELSMTVAEWQRRACVLHSLRQLTQGVAVSAVASDLGYSSPAAFSTMFSRALGTS 246

Query: 252 PGRYIAR 258
           P  +  R
Sbjct: 247 PSAFSPR 253


>UniRef50_A0KHN7 Transcriptional regulator, AraC family n=1 Tax=Aeromonas hydrophila
           subsp. hydrophila ATCC 7966 RepID=A0KHN7_AERHH
          Length = 268

 Score =  202 bits (514), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 71/237 (29%), Positives = 119/237 (50%), Gaps = 1/237 (0%)

Query: 32  TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91
            S  H H  GQL L   G +   +++   + P  Y +W+P  +EH++      +   +++
Sbjct: 31  ASAPHSHPWGQLSLISLGVMEIVLDDHRLVAPADYLIWVPADLEHASYNQQALDYTSIYV 90

Query: 92  -EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150
               A  +P     L+++PL R ++    +R      +    R  ++L ++L +   Q  
Sbjct: 91  NHALAARLPAEPRLLQMTPLIRAILADFCDRKLGHMEDEWDVRQAELLVEKLTRTRCQDS 150

Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210
           +LP+S    +  M+  +   P +   L QWA     +ER LAR  V+E G++F QWR +L
Sbjct: 151 YLPMSQDKLLAPMLAALHSDPADPRTLAQWAEQLHTTERTLARRCVRELGMNFGQWRARL 210

Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSA 267
           +L+ AL  L     VQ++   LGY ST+AFI MF + LG +P RY  +L   + Q+A
Sbjct: 211 KLLKALAWLKGELPVQEIGWRLGYGSTSAFIAMFNRELGCSPQRYRQQLGIGAGQAA 267


>UniRef50_C4WPU9 AraC family transcriptional regulator n=1 Tax=Ochrobactrum
           intermedium LMG 3301 RepID=C4WPU9_9RHIZ
          Length = 260

 Score =  202 bits (513), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 2/238 (0%)

Query: 10  YEPDRHHEA-AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAV 68
           +  D  +    +A         +    H HR+GQL+    G +T   E   +M+P  YAV
Sbjct: 18  HAIDYQNLPRPLAVMRREYKTGMNFGWHSHRRGQLLYGNTGYMTALTEEGAFMLPSGYAV 77

Query: 69  WIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRA 127
            +   + H+ +     E+  +++E + +  +      LK+S L    I  LA        
Sbjct: 78  LLRPDLPHAVETFGETEMYSVYVEENISRDLWEETRVLKVSALLDASIQALAKEPLLYDE 137

Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187
               R L  ++ DE+    +Q L +P+ +  ++R +   +   P     +  WA    MS
Sbjct: 138 NGRGRHLSALILDEIRCAGRQPLTVPLPTEKQLRKLCRNLLGNPGLDLTIDDWAEEVGMS 197

Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245
            R + R   +ETG+SF +WRQ+L+    ++   +G  +   +   GY S +    + K
Sbjct: 198 RRTMTRKFRQETGMSFIEWRQRLRASHVMRRQAEGVPLAMASVEAGYQSVSTLRKVMK 255


>UniRef50_B4SKF1 Transcriptional regulator, AraC family n=2 Tax=Stenotrophomonas
           maltophilia RepID=B4SKF1_STRM5
          Length = 267

 Score =  201 bits (512), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 108/247 (43%), Gaps = 1/247 (0%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           P         +      +      H H  GQ      G +   ++    + PP YA+WIP
Sbjct: 16  PTFSQLPGPIYFRQGAMEPTNWGTHSHPWGQFNFVAQGVMEMKIDGEWMVSPPHYAIWIP 75

Query: 72  GGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130
            G+ H ++  +       ++ P+ +  +P  C  L++SPL REL+  LA +  T    P 
Sbjct: 76  PGMAHYSRNRSALAYRSAYLSPALSRRLPVRCHALEVSPLLRELLHELAQQGVTDPKTPA 135

Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190
            +R+  V+ D++         LPV+S   ++ ++  + K      ++   A    MS R 
Sbjct: 136 QKRMAAVVIDQIVNAAVLPSFLPVASSDVLKQVMVHVEKHLSAAESVADIARRHHMSVRK 195

Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250
           L RL   E G+S   WR +++ + A + L     + ++A  LGY   +AF  MFK+    
Sbjct: 196 LERLARSELGMSLGDWRGRVKFVRATEALCTRRPISRIAEELGYSGVSAFAEMFKRHAQC 255

Query: 251 TPGRYIA 257
           TP +Y  
Sbjct: 256 TPDQYRK 262


>UniRef50_D1UHS6 Transcriptional regulator, AraC family n=1 Tax=Burkholderia sp.
           CCGE1001 RepID=D1UHS6_9BURK
          Length = 276

 Score =  200 bits (510), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 3/249 (1%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
             +   P H H+  Q++ A+ GA+T   +    ++ P+ AVW+P G+ H       +E  
Sbjct: 25  PAQRFFPEHSHQWHQMVYAISGALTVISDGGSIVISPEQAVWLPTGLRHRVGSLLGSEFR 84

Query: 88  FLFIEPSAVT--MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
            L+I     +     +     +SPL R LI+           +    R+ Q++ D+L + 
Sbjct: 85  SLWIADETGSTLAGVSPMVFAVSPLLRALIVEATAIAGQPDDDGYVGRITQLILDQLRRA 144

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
                 LP      +  + E +   P +     +WA    MS R LAR  V ETG+S R 
Sbjct: 145 RPLPTALPWPRDDTLAQLCEKLHADPADPRGPEEWAQRLGMSARTLARRFVAETGMSLRS 204

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY-IARLTTVSP 264
           WR++L+L  A++ L  G  V + A  LGY ST+AFI  F+  LG +P  +   R   V+ 
Sbjct: 205 WRRRLRLFRAIELLGGGMDVTRTALELGYSSTSAFIYAFRLELGSSPQAFMRGRSDRVAS 264

Query: 265 QSAKPDPRQ 273
               P  + 
Sbjct: 265 DPVTPSQQD 273


>UniRef50_Q2NTH9 Putative transcriptional regulator n=1 Tax=Sodalis glossinidius
           str. 'morsitans' RepID=Q2NTH9_SODGM
          Length = 268

 Score =  200 bits (510), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 97/216 (44%), Positives = 130/216 (60%)

Query: 7   LNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQY 66
           L  YEPDR    A A  ++     + +P +QHRKGQLI+ALHG ITC + +AL MVPP  
Sbjct: 8   LTHYEPDRDRNLATAMRLNVVQSAMETPFYQHRKGQLIMALHGGITCELTDALLMVPPHC 67

Query: 67  AVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQR 126
           AVWIP    HSN  T NA  CF+F+EP    +    CTL ISPL ++LIL LA       
Sbjct: 68  AVWIPADTPHSNHATVNARFCFVFVEPIFPGLLARSCTLFISPLLQQLILHLAELPGDYA 127

Query: 127 AEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAM 186
            +  T RL  V+ ++L   P++ L LP SSHP+IR + + +   P E   L  WA    M
Sbjct: 128 LDLPTGRLAVVMLEQLANMPEENLSLPFSSHPRIRRITDTLNHSPAERRTLPAWASLVGM 187

Query: 187 SERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKG 222
           +ER+LARL +KETG++F   RQ+LQLI++++ L   
Sbjct: 188 NERSLARLFIKETGMTFGCRRQRLQLIISIRELACS 223


>UniRef50_A9BQK3 Transcriptional regulator, AraC family n=8 Tax=Burkholderiales
           RepID=A9BQK3_DELAS
          Length = 309

 Score =  200 bits (508), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 70/272 (25%), Positives = 114/272 (41%), Gaps = 25/272 (9%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
                A            P H H   Q+ ++L G +  +      + PP  AVWIP G+ 
Sbjct: 17  QRPVRAKQHRLSARTRVIP-HSHSWAQIAISLDGVLHLSAPQGTLIAPPSKAVWIPPGLV 75

Query: 76  HSNQVTANAELCFLFI-------EPSAVTMP-----------TTCCTLKISPLCRELILT 117
           H+  +   A+L  +++        P    +P             C  L++SPL RELI  
Sbjct: 76  HAVAMVEEADLVSIYVLQDDPAQGPVLPDLPSCGVACNPQDWARCRVLEVSPLMRELITA 135

Query: 118 LANRTTTQRAEP-----MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPV 172
           L  ++  Q A           L  +L +EL +  +  L + +    ++R + E +   P 
Sbjct: 136 LPKQSDDQPAPDAATLQREHHLSALLLEELRRASEVHLGVNMPQDKRLRMLCEAVVADPT 195

Query: 173 EWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTL 232
           +  +L  WA     S R +ARL  ++ G SF  WRQQ+ L   L    +G  +Q++A  L
Sbjct: 196 QHESLADWAADTGASPRTVARLFQQQLGCSFTTWRQQVVLAHGLSLAARGLPIQQIAAEL 255

Query: 233 GYDSTTAFITMFKKGLGQTPGRYIARLTTVSP 264
           GY S +AF  M  + +G  P R+  +    + 
Sbjct: 256 GY-SPSAFSAMVHRTVGMPPARFFGQQAGSAA 286


>UniRef50_C3X452 Putative uncharacterized protein n=2 Tax=Oxalobacter formigenes
           RepID=C3X452_OXAFO
          Length = 254

 Score =  199 bits (507), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 105/239 (43%), Gaps = 7/239 (2%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
              +  P H   +   +    G +    E   W V P    W+P    +  +   +    
Sbjct: 15  PAGIAQPGHAQNESWFVYLEKGFLAVEDERGYWTVLPGRIGWMPPHFHYEIRAYGHVAGI 74

Query: 88  FLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTT------QRAEPMTRRLIQVLFD 140
              + P     +P     L IS L   ++               Q       RL+QVL D
Sbjct: 75  CASLTPLLCAGLPEIPSALAISSLVAPILERAVTWQPDGVGGVFQPLPARQERLLQVLLD 134

Query: 141 ELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETG 200
           EL    Q Q  L +    ++  +   + K P E   + +WA    +S R+++R   +ET 
Sbjct: 135 ELRYSSQGQARLLLPKDKRLNYLAREILKNPGERRTVEEWAERMRISSRSISRHFSRETN 194

Query: 201 LSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
           ++F QWRQ   LI+A++ L +G++V++ A ++GY++ +AFIT FKK  GQTP ++  + 
Sbjct: 195 MTFAQWRQNASLIVAMKRLAEGESVREAARSVGYENVSAFITSFKKAFGQTPAQFRQQF 253


>UniRef50_C8QA12 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b
           RepID=C8QA12_9ENTR
          Length = 282

 Score =  199 bits (507), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 4/246 (1%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           P+     AV+       +  T   H+H  GQL     G +T    + ++  PP+   W+P
Sbjct: 27  PNAPKVIAVSLSKELARERHT---HRHAAGQLYCLKQGLMTVNTPSGIFANPPRLVGWVP 83

Query: 72  GGVEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130
              EH+       +   + I+   A  +P     +    +   L   LA  T        
Sbjct: 84  PHFEHAIVGPGQVQGWTVLIDEVLAAPLPDHPVLMSCPAVLELLAERLATLTPALWGSER 143

Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190
             RL QV  DEL +   Q L LP+   P++  +  ++   P +     + A +   S R+
Sbjct: 144 YHRLGQVFLDELYEATVQPLTLPLPEDPRLLQIARLLIDSPSDMRTGPELARWAGFSPRS 203

Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250
           L+R     TG+S  ++RQ  +L+ +L+GL  G++VQ+VA  +G+++ +++I+ F+   G 
Sbjct: 204 LSRHWASATGMSLTKYRQTSRLLKSLEGLAAGNSVQQVAWQVGFENVSSYISAFRHAFGS 263

Query: 251 TPGRYI 256
           TPG+Y 
Sbjct: 264 TPGKYF 269


>UniRef50_A5FK83 Transcriptional regulator, AraC family n=3 Tax=Bacteroidetes
           RepID=A5FK83_FLAJ1
          Length = 273

 Score =  199 bits (505), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 6/243 (2%)

Query: 20  VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79
             +C H    EL  P H+H K QL+ A    +  T E   + +P ++ +WIP GVEHS +
Sbjct: 22  SIYCHHDLMGELFIPPHRHVKAQLLYAEGDVVFVTTETKTYFLPARHFIWIPSGVEHSIE 81

Query: 80  V-TANAELCFLF--IEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136
             + +  +  L+  +E              ++ L  +++L         +       + +
Sbjct: 82  PKSESVTMRNLYFPVEKDENDFYKVEGIYPVNNLLLQMMLFTNRWNGDLKKGTPNFAIAK 141

Query: 137 VLFDELPQQPQQ--QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
            +   LPQ       L LP     ++  ++  +     E       A  F  SER+L RL
Sbjct: 142 AIKAILPQICTNNLPLELPQPKDKRLSKILRYIENNLGETILFADVAHEFGFSERSLYRL 201

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253
             K+ G+SF Q+    +++ A++ L++   +V++VA  +GY+S   F   F K LGQ P 
Sbjct: 202 FQKDLGMSFIQYYTIRRILKAIELLLERKLSVKEVAEEVGYNSVPTFSNTFFKILGQRPS 261

Query: 254 RYI 256
            Y+
Sbjct: 262 DYL 264


>UniRef50_D1WVC3 Transcriptional regulator, AraC family n=3 Tax=Actinomycetales
           RepID=D1WVC3_9ACTO
          Length = 283

 Score =  198 bits (504), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 4/230 (1%)

Query: 37  QHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAV 96
            HR+ +L+ +  G +T      LWMVPP   +W+P G  H  + +A A     F+ P  V
Sbjct: 55  AHREHELLWSTTGNVTVEAAGHLWMVPPSLGIWLPAGTPHRVRASAGAVTYATFLSPELV 114

Query: 97  TM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVS 155
            +       + +  L REL+L   N   +  A     RL +V  D +       L +P+ 
Sbjct: 115 AVDWAGVVGIPMIRLLRELLLHNQNEEMSTEA---RLRLQRVGVDLIRPVRTVSLDIPLP 171

Query: 156 SHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMA 215
             P++ T+ E +   P +     +WA    +S R L R   ++TG+S  QWR  +++  A
Sbjct: 172 KTPELLTIAERIIADPADDRTTEEWARMIGLSGRTLMRWFQRDTGVSLTQWRILVRVRSA 231

Query: 216 LQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ 265
           L  +  G  V  V+  LGY + + FI +F++  G TP  Y   +  V+  
Sbjct: 232 LIDIAAGKPVVAVSRRLGYANPSTFIDLFRQVTGHTPAAYFRSVNGVAEP 281


>UniRef50_B5GYF3 AraC-family transcriptional regulator n=4 Tax=Actinomycetales
           RepID=B5GYF3_STRCL
          Length = 283

 Score =  198 bits (504), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 69/246 (28%), Positives = 110/246 (44%), Gaps = 5/246 (2%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
           EP     AA+             P H HR  +L+    G +T  + + ++ V   Y +W+
Sbjct: 6   EPLPESAAAILAGSRIVPAPTEWPPHAHRLHELVWVRGGTLTSRMGDRVYTVVEGYGLWM 65

Query: 71  PGGVEHSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEP 129
           P G+ H  + TA AEL   F  P  +    T    + ++PL   L+  L+       A  
Sbjct: 66  PAGMVHEGRATAQAELFHAFFAPDRIPFAFTEPMAITMTPLLESLLTHLSCADIDGEARA 125

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
                  V+FD +    +Q   L +   P+I  + E +   P +  +L +WA     S+R
Sbjct: 126 RAE---SVVFDVIRPSERQ-FALRLPGDPRIDAIAEALLDDPSDGRSLEEWARLLGTSDR 181

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
            + R   + TGL F QWRQ L++  AL  L +   V  V+  LGY   ++FI  F++ +G
Sbjct: 182 TITRAFRQATGLPFAQWRQMLRVHRALMLLAEDIDVTTVSEVLGYAQPSSFIVAFRRVMG 241

Query: 250 QTPGRY 255
            TPG +
Sbjct: 242 ITPGAF 247


>UniRef50_D1XRU9 Transcriptional regulator, AraC family n=4 Tax=Actinomycetales
           RepID=D1XRU9_9ACTO
          Length = 272

 Score =  197 bits (502), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 66/251 (26%), Positives = 102/251 (40%), Gaps = 4/251 (1%)

Query: 6   NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65
           N++  + D    A +               H+HR+ Q +    G +        W VPP+
Sbjct: 3   NVSLADVDHVDRAVLPIGTDY-PPGHVLDWHRHRRAQFLYGATGVMVVDTAEGTWTVPPE 61

Query: 66  YAVWIPGGVEHSNQVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTT 124
            AV IP    H  ++        L+IEP AV   P TC  +++ PL REL+L   +    
Sbjct: 62  RAVLIPAATRHRVRMLG-VSTRSLYIEPGAVPWWPGTCTVVEVPPLLRELLLVAVDLPLD 120

Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184
                    ++++L  E+ ++     H+ +     +  +       P        WA   
Sbjct: 121 YSLAGREGSIVELLLHEIAERAPLPFHVAIPVSADLAGLCRAYLAAPDAGVTNAAWAART 180

Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244
           AMSER   R    ETG S   WR + +L+ A+  L    +V +VA  LGY S  AF   F
Sbjct: 181 AMSERAFTRRFRAETGDSPAVWRSRARLLAAVPLLR-TASVSEVAGRLGYASPAAFTAAF 239

Query: 245 KKGLGQTPGRY 255
            +  G  P R+
Sbjct: 240 TRAFGLPPSRF 250


>UniRef50_B9TN09 HTH-type transcriptional repressor of iron proteins A, putative n=1
           Tax=Ricinus communis RepID=B9TN09_RICCO
          Length = 221

 Score =  197 bits (501), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 66/218 (30%), Positives = 98/218 (44%), Gaps = 6/218 (2%)

Query: 46  ALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANA-----ELCFLFIEPS-AVTMP 99
              G I         ++PP    WIP  + H+  V  N          + + PS  V  P
Sbjct: 4   PAQGVILVEAGGNRQVLPPGRLGWIPPLMPHAASVHGNTLRPGLAGHTIHLAPSLCVGFP 63

Query: 100 TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPK 159
                L++SPL   L+  +         +    RL+ V  DE+       LHL +  HP+
Sbjct: 64  AQSLALRMSPLAVSLMERMFRWPNGTPPDAAGLRLMNVFLDEMRAAAPDPLHLVMPRHPR 123

Query: 160 IRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGL 219
           +  M   +A+ P +   L  WA     S R+L R    ETG+S   WRQ  +L   ++ L
Sbjct: 124 LLAMAATIAENPADETDLDAWAQQLGWSRRSLTRHFRNETGMSVVAWRQVARLQKGMELL 183

Query: 220 VKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
             G +V  VA +LGYDS ++FI +F++ LG TP R+ A
Sbjct: 184 NGGASVTTVALSLGYDSVSSFIALFRRILGTTPARFAA 221


>UniRef50_B4SPX2 AraC protein arabinose-binding/dimerisation n=2
           Tax=Stenotrophomonas maltophilia RepID=B4SPX2_STRM5
          Length = 266

 Score =  197 bits (501), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 9/259 (3%)

Query: 6   NLNGYEPDRHHEA----AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           ++   +PD H +A    A    I A   +  S  HQH + QL+    G    T  + + +
Sbjct: 4   DMAWLQPDAHFDADAWSAPVLGIAASLADHDSGWHQHARAQLLYTRQGCTRLTYGDRISL 63

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLAN 120
           +PP  A WIPGG+ H  Q+    +   L+ + + +  +P     + + PL + L+  +A 
Sbjct: 64  LPPARAAWIPGGLRHRAQMRQAVDYRSLYFDATLSAQLPRQPAIIGVGPLLQALLEPIAQ 123

Query: 121 RTTTQRAE-PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
               Q  + P     + +   E+   P   + LP+   P+I   + +  + P E   LG+
Sbjct: 124 APFDQDWQAPRAHHQLALCVLEIAAAPVAPMDLPLPRDPRIARCLPLAEQLPPE---LGE 180

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
            A    +S R + RL+ ++TG+S++ WRQQ +L+ A++ L+ G  V  VA   G+ + + 
Sbjct: 181 LAARTGLSARTVGRLMQRDTGMSYQAWRQQWRLMRAMELLLLGHRVAHVAQDTGFSAESP 240

Query: 240 FITMFKKGLGQTPGRYIAR 258
           FI  F+   G TP  +   
Sbjct: 241 FIAFFRSMTGTTPAAFQRH 259


>UniRef50_D1BCS3 DNA-binding domain-containing protein, AraC-type n=1
           Tax=Sanguibacter keddieii DSM 10542 RepID=D1BCS3_SANKS
          Length = 310

 Score =  196 bits (498), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 63/228 (27%), Positives = 108/228 (47%), Gaps = 5/228 (2%)

Query: 38  HRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT 97
           HR+ +LI A  G++T   ++ LW VPP   +WIP    H  +          ++ P  V+
Sbjct: 85  HREHELIWATAGSLTVETDDQLWTVPPGLGIWIPALTRHHVRAAPGTLTHVTYLAPERVS 144

Query: 98  --MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVS 155
                    + +S    EL+L   + T       +  RL QV+ D L       L + + 
Sbjct: 145 PSWGAGIAGVTLSRAVHELVLHNKSSTLDDD---VRLRLQQVVVDLLVPVESASLDITMP 201

Query: 156 SHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMA 215
           +  ++R++ + +   P +   L +WA    +S R L+R  V+ETG++  +WR  +++  A
Sbjct: 202 TDLRLRSVADAIVADPADDRTLTEWADTLNISSRTLSRGFVRETGVTLTRWRILVRMRQA 261

Query: 216 LQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVS 263
           L  +  G +V  VAH LGY + + F  +F++ LG TP  Y+  L    
Sbjct: 262 LLEISSGRSVAAVAHRLGYANPSTFTDLFRQTLGHTPAAYLRSLDARE 309


>UniRef50_Q13JN4 Transcriptional regulator, AraC family n=13 Tax=Proteobacteria
           RepID=Q13JN4_BURXL
          Length = 285

 Score =  195 bits (497), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 5/248 (2%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           P+ H +A            L    H H   Q++ A+ G +   V     +VPPQ AVW+P
Sbjct: 16  PELHDDADARSLARHYPRGLRIDPHSHTWAQVLYAVSGVMWVEVGREALVVPPQRAVWLP 75

Query: 72  GGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130
            G +HS  + +  E+  L++    V  +       +++ L RELI ++A    T   +P 
Sbjct: 76  AGTQHSIHMMSEVEMRNLYLHERNVGHLSRRSDVFEVNGLLRELITSIAEYEGTGARDPA 135

Query: 131 TRRLI-QVLFDELPQQPQQQLH--LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187
                 ++   EL   P+  L   LP +S  ++  +   +   P    +  Q A     S
Sbjct: 136 YLDAAYRLAMLELAHAPRSSLRIALPDASDRRLEALCRAVIDNPSIAISFEQHAASVGAS 195

Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247
            R LARL  +E G+ F +WR+Q+QL +A+  L +G  V  +A +LG+   ++F  MF++ 
Sbjct: 196 VRTLARLFTRELGVGFAEWRRQVQLAVAVSWLAEGRPVSSIARSLGFQ-PSSFSDMFRRE 254

Query: 248 LGQTPGRY 255
           LG  P  +
Sbjct: 255 LGAPPTGF 262


>UniRef50_D1BHF8 DNA-binding domain-containing protein, AraC-type n=1
           Tax=Sanguibacter keddieii DSM 10542 RepID=D1BHF8_SANKS
          Length = 309

 Score =  195 bits (496), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 9/246 (3%)

Query: 29  DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88
            E+T P H+H + +L+    G+ +   +   W +PP  AVW+P GV ++    A + +  
Sbjct: 42  GEVTWPAHEHAESELLWCASGSASLEADGRRWTIPPSLAVWVPAGVRNAAGAAAGSLVRA 101

Query: 89  LFIEPSAVTM---PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
            F + +A  +   P     + ++   R L++    R     A    RRL +V+ D L   
Sbjct: 102 TFFDVAATRLVDVPDVVTGVAMTDAVRVLLMHNHLRDLDDAA---RRRLHRVVLDLLVPV 158

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
           P +   L +     +R + E +   P +     +WA    +  R LAR    ETG++F +
Sbjct: 159 PHESFDLLLPRTGHLRWVAESILADPGDRRTTEEWASRCGLHPRTLARQFHAETGVTFTR 218

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ 265
           WR   ++  A++ L  G  V  V+  +GY S +AF+  F++  GQTP  Y+ R    +P 
Sbjct: 219 WRILARMQWAIRELALGAPVLAVSRQVGYRSPSAFLAHFRELTGQTPTAYVGR---PAPV 275

Query: 266 SAKPDP 271
             +P P
Sbjct: 276 VDEPGP 281


>UniRef50_Q28KW4 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1
           RepID=Q28KW4_JANSC
          Length = 253

 Score =  195 bits (496), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 2/221 (0%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
                S  H H + Q+I ++ G +    E   W VP  + + +P G+ H+ ++  +  + 
Sbjct: 25  ESGYRSDWHSHPRHQIIYSVSGLMMTDTEGVRWAVPSGFGLIVPAGIAHTTKMIGDVSIE 84

Query: 88  FLFIEPSAVTMPT--TCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
            L++ PS+       +C  + IS +   LI  L       R       L Q++F EL   
Sbjct: 85  TLYVSPSSRGRSAFESCRVVSISAMLASLISELCREELRDRNSRKAFHLRQLIFLELSDA 144

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
           P   L +     P++R + + +   P     + QWA     S R+  R    +T  +FRQ
Sbjct: 145 PTSHLAVKYPVDPQLRRVCDALIADPANSWTIDQWAFEIGKSRRSFTRAFYSQTDQTFRQ 204

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKK 246
           W Q+L+  +ALQ   +G +++++A  LGY S  +   M +K
Sbjct: 205 WTQRLRCQLALQKRAEGQSLERIARDLGYGSRYSLEAMMQK 245


>UniRef50_C3JM12 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus
           erythropolis RepID=C3JM12_RHOER
          Length = 278

 Score =  194 bits (494), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 74/252 (29%), Positives = 110/252 (43%), Gaps = 12/252 (4%)

Query: 11  EPDRHHEAAVAF--------CIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMV 62
           E DRH   A A          I         P H H + +LI +  G +   +EN LW V
Sbjct: 23  ESDRHTPMARAVPAPFQLTTYIVETDHITRWPEHAHVEHELIWSDRGVVNMIIENQLWTV 82

Query: 63  PPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANR 121
            P   +WIP GV H  Q   +         P          C + +S   R L++ LA+ 
Sbjct: 83  TPGVGLWIPRGVLHEGQANPHVAFRATLFTPELWTPAWNEPCIVTLSEAARALLIHLAH- 141

Query: 122 TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWA 181
             T        R  QV  D L         +P+   P++R +V+ +   P +  +L QWA
Sbjct: 142 --TGMPAEQRLRAQQVCVDLLTPASAPHFDVPIPRDPRLRMLVDKVLSDPADDRSLDQWA 199

Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241
               +S R + R+   E  LSF QWR  +++  AL  L  G +V  V+  +GY ++++FI
Sbjct: 200 HVLNLSRRTVTRIFAAELALSFAQWRTLVRMSTALGMLGTGMSVNAVSRRVGYGTSSSFI 259

Query: 242 TMFKKGLGQTPG 253
             F+K +G TPG
Sbjct: 260 AAFRKTVGYTPG 271


>UniRef50_A6SYJ9 Transcriptional regulator, AraC family n=2 Tax=Oxalobacteraceae
           RepID=A6SYJ9_JANMA
          Length = 249

 Score =  194 bits (494), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 64/237 (27%), Positives = 112/237 (47%), Gaps = 10/237 (4%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
           +H HR+ QL+ A  G +  T     W+VPP  AVW+P G+EH+  + A+ E+  L I+P 
Sbjct: 16  LHVHREAQLLFASSGVMQVTTPKGHWLVPPARAVWLPPGIEHAVDMLADIEMRALLIQPE 75

Query: 95  AVTMPTTCCTLK------ISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQ 148
            +        L+      + PL RE IL      +  +   +   L      E       
Sbjct: 76  QLAQHPAAPRLQSEFVATVGPLLRETILGAFKADSHPQRLALLLELALFELVE---DEDA 132

Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208
           +  +P+    + R + +M+   P     L   A     S R + RL   ET L+F++WRQ
Sbjct: 133 RTFMPMPHDARARRVADMILADPANGSELELLAYSAGASARTITRLFPAETNLTFKEWRQ 192

Query: 209 QLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSP 264
           + +++ A++ L  G  +++++A  LG+ S  +F   F++ +G TP   + R  + +P
Sbjct: 193 RARIMAAVEALGNGQTSIKQLALQLGFSSVASFGHAFRQIMGMTPSEMMRRSESAAP 249


>UniRef50_Q1ZV01 Transcriptional regulator, AraC family protein n=2
           Tax=Photobacterium angustum S14 RepID=Q1ZV01_PHOAS
          Length = 283

 Score =  194 bits (493), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 63/255 (24%), Positives = 116/255 (45%), Gaps = 9/255 (3%)

Query: 9   GYEPDRHHEAAV---AFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65
            ++PD      V   A   H     L S +H H KGQL+    G     +EN+ + + P 
Sbjct: 18  HFDPDAIKSPIVPIYATFSHKEEHSLRSKMHSHSKGQLVYIKSGTAIVRLENSTYSILPN 77

Query: 66  YAVWIPGGVEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTT 124
             +WIP G+ H+  +  N +   ++I+      +     T  +S L  E+I T+   +  
Sbjct: 78  QMIWIPSGMIHNVILRNNVDFRAIYIDQKQFPRLSKNFETFFVSVLLEEIIETICLSSFH 137

Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVE---WGALGQWA 181
                 T   +Q +   + +  +        + PK + +   + K   +   +  L +  
Sbjct: 138 TDWMVGTEFHLQSIL--IMKMQKLSSTPQWPAFPKDKRVCNYLLKFYEKGEMFPRLYELV 195

Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241
                SER + RL V+ TG+S+++WRQ  +L++A++ L    ++ ++AH L + +T+AFI
Sbjct: 196 SNTGASERTIHRLFVQSTGMSYQKWRQHARLMLAIELLSTNKSITEIAHHLEFSTTSAFI 255

Query: 242 TMFKKGLGQTPGRYI 256
           + FK     TP +Y 
Sbjct: 256 SFFKSYQNITPKKYR 270


>UniRef50_C0YRY4 AraC family transcriptional regulator n=1 Tax=Chryseobacterium
           gleum ATCC 35910 RepID=C0YRY4_9FLAO
          Length = 304

 Score =  194 bits (492), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 52/269 (19%), Positives = 112/269 (41%), Gaps = 10/269 (3%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           ++ +N + ++     +A   +  H  T  +T+ +H H   QL+ A  G +    +   W 
Sbjct: 35  LYTMNDSHFKAVEEDDAE-FYVYHVLTGNVTTEIHYHSSAQLVYAEGGIVHVFTDQKHWY 93

Query: 62  VPPQYAVWIPGGVEHSNQVTAN-AELCFLFI--EPSAVTMPTTCCTLKISPLCRELILTL 118
           +P +  +WIP G  H    T+   +L   +   E +            ++ L RE+I   
Sbjct: 94  LPARCFMWIPAGTPHYIFSTSPKVDLFNFYFKKEENESGFFDEINIYSVNNLLREMIFYT 153

Query: 119 ANRT-----TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVE 173
            +                + L  VL ++  +     +  P      +  +   +     +
Sbjct: 154 KDWDGKITKNDHSKYYFLKALKGVLQEKKHKHLAFPIQHPFPKDETLLKIARYIHANLEK 213

Query: 174 WGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTL 232
              +   A  F MS R L+R   +  G+++ ++ + L++  +L+ +++G   + ++A  +
Sbjct: 214 PLTIESTAKEFGMSTRTLSRKFKEILGMNYVRFLRALRITRSLELMLEGKYNMYEIAMMV 273

Query: 233 GYDSTTAFITMFKKGLGQTPGRYIARLTT 261
           GY+S ++F  +FKK +G  P  Y  +L  
Sbjct: 274 GYNSLSSFSNIFKKIIGVPPTEYQHKLRG 302


>UniRef50_C3JND7 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus
           erythropolis RepID=C3JND7_RHOER
          Length = 285

 Score =  194 bits (492), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 3/230 (1%)

Query: 26  AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85
           A   + T  +H+H   +L+ A+ G +       ++ VP   ++WIP  V H     +  E
Sbjct: 42  AVDSDYTWEMHRHSDHELLWAIDGVLEVRTPETVYTVPSGVSLWIPSFVPHEVTARSGTE 101

Query: 86  LCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
           L   ++  S VT       L   PL  +++  L   T     +   RR      D +   
Sbjct: 102 LSCTWLVASDVTGLDRVVALSTPPLLEQVLDHL---TRDDLTDAARRRAEAFAIDLVEPV 158

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
           P+    +P+ + P +R + + +   P +  ++ +WA    +S R L R    ETGL+F +
Sbjct: 159 PRLIFDVPLPTTPWLRQIADQLVASPADTRSVEEWAADAKVSTRTLTRRFPAETGLTFSE 218

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           WR +L+   A+Q L  G ++  VA   G+ S +AF   F++ +G TPG +
Sbjct: 219 WRMRLRAHHAMQLLALGRSISFVARKTGFRSESAFGAAFRRTMGVTPGEF 268


>UniRef50_D0J7V7 Transcriptional regulator, AraC family n=6 Tax=Proteobacteria
           RepID=D0J7V7_COMTE
          Length = 271

 Score =  193 bits (491), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 65/255 (25%), Positives = 113/255 (44%), Gaps = 5/255 (1%)

Query: 8   NGYEPDRHHEAAVAFCI----HAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63
             +  D  H  A +  +             P H H +G LI A  G +     +  W+VP
Sbjct: 9   GAHALDLQHAQASSLPVTGVEQRYPPGHVVPQHSHARGHLIYASEGVLLVESPSGQWLVP 68

Query: 64  PQYAVWIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRT 122
           P  AVW+  G+ H    T       LF++ + +  +P     L ++PL REL+  L    
Sbjct: 69  PTTAVWLRPGMLHQITATTAVRAYGLFVDEAWSAQLPARDGVLHVAPLVRELMTALVALP 128

Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182
                 P    L  +L +EL        +LP      +R + E M   P +   +   A 
Sbjct: 129 HEGPHRPRDALLGSLLLEELSALAPLPYYLPWPQDALMRRICESMLSAPAQRTTVEALAR 188

Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242
             A++ + L R  +K TG+++ +W QQ++L+ ++  L++G  +  VA   GY+S +A+  
Sbjct: 189 QHALTPKTLHRRFLKSTGMNWGRWYQQMRLMASIPQLLQGMAITTVALESGYESHSAYSA 248

Query: 243 MFKKGLGQTPGRYIA 257
            F++  G+ P  ++A
Sbjct: 249 AFRRQFGRPPSEFVA 263


>UniRef50_Q212B5 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas
           palustris BisB18 RepID=Q212B5_RHOPB
          Length = 268

 Score =  193 bits (490), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 63/243 (25%), Positives = 109/243 (44%), Gaps = 3/243 (1%)

Query: 13  DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72
           D    AA+   +    D  T  +HQH  G+L L   G +     N  W++P  +  W+P 
Sbjct: 19  DGLDGAAMRSALTKTLDVFTRGLHQHPHGELFLLRAGYLKAQSPNGRWLIPAGHLCWVPP 78

Query: 73  GVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQR-AEPM 130
             EH    T + +   +++ P     +P   C ++ + L   +I  L     T +     
Sbjct: 79  FTEHGAD-TDSTQGVRIYLAPELCGVLPRDSCVMRNTALILAVIDRLTAPDRTAKVLTEP 137

Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190
            +RL+ VL DE+ +     + LP+    ++    E +   P +   L  +A    MS R+
Sbjct: 138 EKRLLGVLCDEIERARSTPILLPMPQDARLSRTAEKLLGSPNDQSDLDVFAAEAGMSRRS 197

Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250
             R    +TGLS  +WRQ  +L+  +  L  G +V + A  LGYDS ++F+ + ++  G 
Sbjct: 198 FTRNFKLDTGLSIGEWRQIARLMHGIDMLAAGKSVTETAFALGYDSISSFVALCQRHTGM 257

Query: 251 TPG 253
           +P 
Sbjct: 258 SPK 260


>UniRef50_A8L421 Transcriptional regulator, AraC family n=12 Tax=Actinomycetales
           RepID=A8L421_FRASN
          Length = 290

 Score =  192 bits (489), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 110/258 (42%), Gaps = 12/258 (4%)

Query: 19  AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78
           A+        + L +  H H   Q+  A+ G +      A +++PPQ A WIP G+EH  
Sbjct: 28  ALGGSYLYEGERLVTGWHSHDLHQIEYAVAGVVEVETATAHYLLPPQQAAWIPAGLEHQA 87

Query: 79  QVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQ-RAEPMTRRLIQ 136
            +        +  +P  V  P      L ++PL RE+++        +   +P+     Q
Sbjct: 88  TMNTAVRTVSVMFDPRLVPHPGDRARILAVAPLIREMMIYALRWPIARAEHDPVADGFFQ 147

Query: 137 VLFDEL--PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
            L   +      +  L LP S+ P +   +        +   +G+ +    +SER L R 
Sbjct: 148 TLGHLVSEALDHEAPLSLPTSTDPIVSAAMAYTQNHL-DSVTVGEVSRAVGVSERTLRRQ 206

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLV-KGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253
                GLS+R +  Q +L+ A+      G +V +V+  +G+D+ +AF   F +  G+TP 
Sbjct: 207 FRSTLGLSWRSYLLQARLLRAMALFAVPGQSVLEVSTAVGFDNGSAFARAFSQYCGETPS 266

Query: 254 RYIARLTTVSPQSAKPDP 271
            Y  R+      SA P P
Sbjct: 267 SYQRRI------SAAPQP 278


>UniRef50_D1XNW1 Transcriptional regulator, AraC family n=1 Tax=Streptomyces sp.
           ACTE RepID=D1XNW1_9ACTO
          Length = 291

 Score =  192 bits (489), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 68/259 (26%), Positives = 111/259 (42%), Gaps = 9/259 (3%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSP----VHQHRKGQLILALHGAITCTVENALWMVPPQYA 67
           P    +    F I AG    + P     H H   +L+    G +T  V + ++ V   + 
Sbjct: 26  PPLPEQTTAPFAIVAGLRIPSVPTEWSPHAHPLHELVWVRGGTLTSRVRDRVFTVSTGHG 85

Query: 68  VWIPGGVEHSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQR 126
           +W+P G  H  +VTA A     F  P            ++++PL   L+  L+       
Sbjct: 86  LWMPAGTTHGGRVTAGARFYEAFFAPDRAPFAFEEPRAIEMTPLLESLLNHLSRTDLDAA 145

Query: 127 AEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAM 186
           A      ++  +     Q  ++Q  L +    +I  + E +   P +  +L +WA    +
Sbjct: 146 ARARAESVVYDVL----QPSERQFALQLPGDARIDVIAEALLDDPADCRSLEEWARLLGI 201

Query: 187 SERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKK 246
           S+R + R   + TGLSF QWRQ L++  AL  L +G  V  V+  LGY   + FI  F+K
Sbjct: 202 SDRTVTRAFRQATGLSFAQWRQALRVHRALALLSEGLDVTTVSEVLGYAQPSTFIASFRK 261

Query: 247 GLGQTPGRYIARLTTVSPQ 265
            +G TPG + A   +    
Sbjct: 262 VVGTTPGAFSASAGSAPEN 280


>UniRef50_C9PG34 Transcriptional regulator AraC family n=1 Tax=Vibrio furnissii CIP
           102972 RepID=C9PG34_VIBFU
          Length = 245

 Score =  191 bits (485), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 4/233 (1%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
                +  H H + QL     G +    E   W V      W P G  H  +V  + E  
Sbjct: 12  PQSAVTGWHTHLESQLFWVNRGILMVEAEQQRWTVASGCLAWNPAGCRHRTEVITDVEGE 71

Query: 88  FLFIEPSAV--TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
            L+++ + +   MP     ++   L   LI  L+  T    ++   +  + +L  E+   
Sbjct: 72  LLYVQDATMLDAMPA-PKLIRCDDLTSALIKRLSG-TEYNASDTCEQAWLALLGSEISHA 129

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
           P   L LP+    + R +   +   P    +    A  F +S R L RL  ++TG++F  
Sbjct: 130 PATPLQLPLPEDKRARKVANYLIAEPENRLSQETLAERFGLSSRTLHRLFRQQTGMTFVH 189

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           WRQQ +L+ +L  L  G ++ +VA   GYD+T ++I +F++  G TP  Y+ +
Sbjct: 190 WRQQSRLLHSLSLLEAGKSITEVALASGYDNTGSYIQLFRQRFGVTPKLYLRQ 242


>UniRef50_C3JWU5 Transcriptional regulator, AraC family n=4 Tax=Rhodococcus
           erythropolis RepID=C3JWU5_RHOER
          Length = 274

 Score =  191 bits (485), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 66/241 (27%), Positives = 115/241 (47%), Gaps = 6/241 (2%)

Query: 28  TDELTSPVHQHRKGQLILALHGAI-TCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL 86
           + +     H+H + +LI    G + T   +   W VPP   +W+P G  H+ +     E 
Sbjct: 31  SHQRQWAPHRHPEHELIWGNSGGMLTVVADGITWEVPPSAGLWLPAGALHAVKAGPGTEF 90

Query: 87  CFLFIEPSAVTMPTT-CCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
              +  P A   P+       +S L RE++L +  R     A     R   V FD L   
Sbjct: 91  FCTYFRPEAHAAPSGVPGLFGVSALLREVLLHMHRRNMPDEARSRAER---VAFDMLQPL 147

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
               + +P+ + P+   + E +   P +  +L +WA     S R L R+  + TG++F Q
Sbjct: 148 EVAAVEVPMPTDPRALFVAEALVANPADQRSLSEWALTAGGSVRTLTRVFAQGTGMTFAQ 207

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ 265
           WR Q+++  AL  L  G  V  V+  +GY++ +AF+ +F++  G+TPG  + +  +V+P+
Sbjct: 208 WRIQVRVRAALTYLAAGVPVSVVSRRVGYETPSAFVAVFRRVTGRTPGSMMNK-GSVAPE 266

Query: 266 S 266
           S
Sbjct: 267 S 267


>UniRef50_B5I4G1 AraC-family transcriptional regulator n=1 Tax=Streptomyces sviceus
           ATCC 29083 RepID=B5I4G1_9ACTO
          Length = 268

 Score =  190 bits (483), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 2/226 (0%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
                   H H  GQL  A  GA+    +   W+ P    +W+P    HS++     ++ 
Sbjct: 29  AHGAEVAAHFHDYGQLRYAARGALVTATQVGTWVTPASRIMWVPPFAVHSSKAYGETDIR 88

Query: 88  FLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146
            L +  +    +P        S L RE  L L +        P  R LI V+  EL +  
Sbjct: 89  VLSLPVTLTGQLPAEPSVFVASALLREAYLALMSEG-EPLESPRARLLIDVVLAELARAA 147

Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206
           Q+ L LP  S  +++ + +++   P     L +       SER L+RL   E  +SF QW
Sbjct: 148 QEPLRLPEPSDRRLKAVTDLLHMDPASPATLAELGHRAGASERTLSRLFGSELSMSFHQW 207

Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252
           R  L++  AL  L  G +V   A  LG+ + ++FI  F + +GQTP
Sbjct: 208 RTLLRIQRALIELSDGASVTATAIRLGWSNPSSFIDAFTELVGQTP 253


>UniRef50_B9K583 Transcriptional regulator n=3 Tax=Alphaproteobacteria
           RepID=B9K583_AGRVS
          Length = 251

 Score =  189 bits (479), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 9/229 (3%)

Query: 34  PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93
           P+H H + QL  A  G +    E   W+VP Q AVWIP  V H   V  +A+L  +  EP
Sbjct: 20  PIHAHDEAQLTFAASGMVQVHTEEGRWLVPSQLAVWIPARVPHRVDVLTDADLWMVHWEP 79

Query: 94  SAVTMPTTCC------TLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147
           SA               L+++PL + L+        ++    +  +L+     EL     
Sbjct: 80  SAAQEWAPPVPLDQTFALRVTPLMQSLLEAAFMADVSREKGELVAKLM---LHELTSTAH 136

Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207
               LP+ +      + +M         ++ ++A   A S R L+RL   ETGL+F+ WR
Sbjct: 137 APTFLPLPTSTIGLRVADMALTDHQSLMSIDEFASRAATSVRTLSRLFPSETGLTFKAWR 196

Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           Q+ +++ ++  L KG  + +VA   G+ S  +F   F++    TP +++
Sbjct: 197 QRARIVQSMDLLAKGKPIARVAADFGFSSAASFSHAFRQVTAMTPTQFM 245


>UniRef50_D1VIF5 Transcriptional regulator, AraC family n=1 Tax=Frankia sp. EuI1c
           RepID=D1VIF5_9ACTO
          Length = 250

 Score =  188 bits (478), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 65/245 (26%), Positives = 106/245 (43%), Gaps = 4/245 (1%)

Query: 13  DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72
           DR   A   + +         P+      QL+    GA+T +     W +PP  A+WIP 
Sbjct: 7   DRAEPAVRGYAVTHPPGVAALPIQA-GWDQLLYTASGAMTISTPAGSWFIPPHRALWIPD 65

Query: 73  GVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKIS-PLCRELILTLANRTTTQRAEPMT 131
           G + + +  + A +  L+        P     + +     REL+L    R      +P+ 
Sbjct: 66  GAQATVRNRSPAAVRNLYFATPLGVAPPRAQAVAVPERFGRELLLHAVRRCPLDLGDPVH 125

Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191
             L+ VL D+L   P+  + LP  S P+   +   +   P     L   A     S R L
Sbjct: 126 AALLTVLVDQLRGLPEASVWLPWPSDPRASDLATALVADPA--AGLTSLAHRVGASRRTL 183

Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251
            R    ETGLS   WR++ +++ +L  L  G +V + A   GY + +A++  FK+ LGQT
Sbjct: 184 ERAFGAETGLSLGAWRRRARILSSLDTLAAGASVTQAAIEAGYATPSAYVAAFKQELGQT 243

Query: 252 PGRYI 256
           P  ++
Sbjct: 244 PRHFL 248


>UniRef50_C0YKZ5 AraC family transcriptional regulator n=1 Tax=Chryseobacterium
           gleum ATCC 35910 RepID=C0YKZ5_9FLAO
          Length = 260

 Score =  188 bits (477), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 5/228 (2%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTAN-AELCFLFIEP 93
            H H+KGQL+    G    T+E  ++++P  +AVWIP    H     +   +L  +F + 
Sbjct: 30  FHHHQKGQLVYVESGFQYITIEEKIYLLPQNHAVWIPPNAVHKTNSHSEKIKLMIMFADI 89

Query: 94  SAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQ--QL 150
           S             + P+ +E+I      +    ++      ++ LF+ELPQ  +    L
Sbjct: 90  STDNPFYHEISVFSVPPVLKEMIKYSEKWSKLMISDYNETLFLKTLFNELPQFVKHSLTL 149

Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210
           H+ +    ++  ++E +    +    +   +    +S R L R+  KETGL+  +++Q L
Sbjct: 150 HICLPKDKRLTKVIEHLHSHYLNEIKMEDLSDAAFLSFRTLERIFKKETGLTLSKYQQML 209

Query: 211 QLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           ++I +L+ L  G  T+ + A+ +GY S  AF   F+  +   P  +I 
Sbjct: 210 RIIKSLELLSSGTLTISETAYEVGYKSVQAFTRSFQAVMQFRPTDFIK 257


>UniRef50_A8U313 Helix-turn-helix, AraC type:Arac protein,
           arabinose-binding/dimerisation n=1 Tax=alpha
           proteobacterium BAL199 RepID=A8U313_9PROT
          Length = 282

 Score =  187 bits (474), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 3/261 (1%)

Query: 15  HHEAAVAFCIHAG--TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72
           H EA VA   HA       + P H+H +GQL L L   +     + +W+VP    +W+P 
Sbjct: 22  HVEADVAIIGHAASFAPGASVPWHRHSRGQLALTLARVMRVETPDKVWLVPRGSVLWLPA 81

Query: 73  GVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131
              H +       +  L++ P  A ++PT    ++      +++  LA    + R +   
Sbjct: 82  ETPHRSLAPEQRLMRSLYVRPDSAESLPTAPTAVEQGTPLADMVTWLAETYDSDRLDKAW 141

Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191
             +       +   P   + LP  + P +  + + +   P    +L  WA  F M+ R L
Sbjct: 142 STVAGAALALVRPGPGVSIRLPQPADPALAVIADAVLADPAVEISLEDWAERFGMAGRTL 201

Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251
            R +  ETG+S+R WR+ L L +A + L+ G  V  VA   GY  T+AF+  F+     T
Sbjct: 202 RRRVQAETGMSYRDWRRILGLTVAAERLLAGSRVTDVAFETGYAGTSAFVAAFRAAFQVT 261

Query: 252 PGRYIARLTTVSPQSAKPDPR 272
           PG +  R       +A    R
Sbjct: 262 PGEFQRRAALRGRPAAGASGR 282


>UniRef50_C3JLV5 AraC-family transcriptional regulator n=2 Tax=Rhodococcus
           erythropolis RepID=C3JLV5_RHOER
          Length = 268

 Score =  186 bits (472), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 6/232 (2%)

Query: 31  LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLF 90
                H+H + Q+     G +       +W +  ++ VW+PG V H   + +   +   +
Sbjct: 38  TAYGAHRHPEHQIAWMSEGTMQIAAGGNVWHLHSEHLVWLPGTVLHDMTLLSAGCMIAAY 97

Query: 91  IEPSAVTM---PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147
             P         T    L++  L  +L+  LA+RT       M++   ++L+D L   P+
Sbjct: 98  ARPDLRPGGPRWTQPLVLEVDALSAQLLRHLADRTIDDARRLMSQ---ELLYDILAAAPE 154

Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207
           +   L V  +    ++   +   P +   LG+WAG   +S + L R  V +TG++F QWR
Sbjct: 155 RHDVLAVPRNAAASSVSARILADPADSRTLGEWAGELGVSSKTLMRAFVADTGITFGQWR 214

Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
            + ++  +L+ L +G+ V  VA  +GY +++ FI  F++  G TP RY  +L
Sbjct: 215 TRARMYASLEMLARGEGVNDVAPQVGYRTSSGFIAAFRETFGTTPARYGGKL 266


>UniRef50_C0YJ90 AraC family transcriptional regulator n=1 Tax=Chryseobacterium
           gleum ATCC 35910 RepID=C0YJ90_9FLAO
          Length = 270

 Score =  185 bits (470), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 9/254 (3%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           PD   +    F +H  +++L  P H+H KGQL     G    T++N  ++VP ++  WIP
Sbjct: 8   PDIDKDDKSVFVMHEKSEKLI-PFHKHTKGQLSYVEGGIAYITIDNKTYVVPARHFFWIP 66

Query: 72  GGVEHSNQV-TANAELCFLFI---EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQ-R 126
            G+EH  ++      L  L+    +  +    +       S L  ++I            
Sbjct: 67  QGMEHILEIGHTATVLRSLYFYAHDDISDPFYSRLGIYPASELLIQMIKYTEIWDEKHVT 126

Query: 127 AEPMTRRLIQVLFDELPQQPQQQLH--LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184
           A+      +  L   LP+  QQ L   LP + H ++  +V  +     E   L   +  F
Sbjct: 127 AKDENFEFLVALKKILPKTHQQPLPIILPATHHKQMMKIVSYLEWNIGERLTLAHVSSKF 186

Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITM 243
            +SER+L+RL   +  +SF Q+ + L+++ A++ L+  D  + ++A  +GY S +AF   
Sbjct: 187 GLSERSLSRLFKADMDISFLQYLKTLRIVKAIELLLNTDKPINEIADDVGYSSISAFSDT 246

Query: 244 FKKGLGQTPGRYIA 257
           F +     P     
Sbjct: 247 FHEFTQSRPSDLRK 260


>UniRef50_C3JVD6 Transcriptional regulator, AraC family n=3 Tax=Rhodococcus
           RepID=C3JVD6_RHOER
          Length = 277

 Score =  185 bits (469), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 63/258 (24%), Positives = 113/258 (43%), Gaps = 6/258 (2%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDE-LTSPVHQHRKGQLILALHGAITCTVENALW 60
           +  L ++ +E D   E  V +   +  D+ +T   H HR  +++    G +       +W
Sbjct: 20  IDELVVSEHELDDEPEDLVLWGGASSADQPVTWETHAHRSNEILFPRSGIVVVRSGAQMW 79

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLA 119
            + P   +WIP    HS +V A A+   ++       ++      +  +PL  EL+L L+
Sbjct: 80  TLLPGRGLWIPALHRHSVRVAAGAQFLTVYCAVGQGPSLGDHPVAVHGTPLLYELLLHLS 139

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
            R  +  A     R   V FD L     ++  + +     +  +   +   P +  + G 
Sbjct: 140 AREMSDDARRRAER---VFFD-LVVPGDERGAMKIPDSGPVGRIARDLLSHPEDPRSFGD 195

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
           WA    +S   LAR    +TG+SF QWR  L++ +A+  L +   V  VA  +GY + ++
Sbjct: 196 WANEIGVSTSTLARRFKVDTGVSFGQWRVLLRMNVAMSLLGQDVAVADVAEQVGYSTPSS 255

Query: 240 FITMFKKGLGQTPGRYIA 257
           F+  FK+  G TP  +  
Sbjct: 256 FVAAFKQSTGVTPMAFRK 273


>UniRef50_A5VF29 Transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria
           RepID=A5VF29_SPHWW
          Length = 274

 Score =  185 bits (469), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 6/247 (2%)

Query: 21  AFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV 80
            F        ++   H H   QLI A+ G I    + A  ++P   A WIP G  H   +
Sbjct: 25  GFSFRDPERAISYDWHDHPYHQLIYAVAGTIQIETDAARHLLPTGRAAWIPAGQRHRT-L 83

Query: 81  TANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTT-QRAEPMTRRLIQVL 138
             + +   L+  P AV         L  SP+ RE+IL            +P+ R     L
Sbjct: 84  VHDVDTASLYFAPDAVADGGGRVRILVASPVMREMILHALRWPQAVAERDPVARSFFGTL 143

Query: 139 FDELPQQ--PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196
                +    +  L LP + HP I   +++ A  P     L       AMSER+  R   
Sbjct: 144 ALMCGEWLESELPLSLPGARHPGIVRAMDLAAVDPA-GIDLPAALAAAAMSERSFRRAFS 202

Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           +ETG+ ++ W  QL+++ A+  L  G  V  VA  +GY S +AF   F +  G+ P  Y 
Sbjct: 203 RETGMGWQAWVAQLRILRAMGMLADGGRVTDVAAEVGYASLSAFAKAFAQLAGEGPADYR 262

Query: 257 ARLTTVS 263
           +R+   +
Sbjct: 263 SRVRGRT 269


>UniRef50_D1BBW6 DNA-binding domain-containing protein, AraC-type n=1
           Tax=Sanguibacter keddieii DSM 10542 RepID=D1BBW6_SANKS
          Length = 257

 Score =  184 bits (466), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 6/234 (2%)

Query: 25  HAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANA 84
            A   E  S VH   + +L+     AIT      +W+VPP   +W+P G  H      +A
Sbjct: 21  AAEAREWVSAVHH--EHELLWCAGRAITVEARGQVWLVPPTLGIWLPAGTVHRVTAHPDA 78

Query: 85  ELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELP 143
            +   +++ S  V    +   + ++PL  EL+L           +     L  +  +++ 
Sbjct: 79  SVFAAYLDTSREVPGWDSILGVPVTPLLHELLLH---NRRAAMPDASRHALQALAVEQMV 135

Query: 144 QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203
                 + L +     +R + E +   P +  +L  WA    MS R   R  + +TG +F
Sbjct: 136 PLTAATIELRLPRDLALRGVAEQVVADPGDGRSLDAWASSIGMSPRTFMRRFLDDTGSTF 195

Query: 204 RQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
            QWR   ++  AL  L +G  V  VA  +GY ST  F+ +F++  G TP  Y  
Sbjct: 196 AQWRILARVAAALTMLAEGRAVATVARAVGYSSTGTFVALFRRTTGMTPAAYSR 249


>UniRef50_Q84HW2 Transcription regulator n=1 Tax=Rhizobium sp. TAL1145
           RepID=Q84HW2_9RHIZ
          Length = 200

 Score =  182 bits (463), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 64/198 (32%), Positives = 107/198 (54%), Gaps = 2/198 (1%)

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTT--CCTLKISPLCRELILTLA 119
           VPP  A+WI    +H   V   AE+  L+++P+    PT+  C  ++++PL RELI + A
Sbjct: 3   VPPTRALWIRANTDHKLSVARAAEIRVLYVDPAIGCAPTSSSCVVVEVTPLVRELISSCA 62

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
                 +      RL +VL D++    +  + LP+ + P+   +V+M+ + P     L  
Sbjct: 63  GLPWDYQPGSKEARLCEVLLDQIATLDRSPVDLPIPTDPRGLRIVDMLKREPSSREPLAA 122

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
            A     S R + R+ V+ET L+F  WRQ+L+L+ AL+ L  G+ V  VA  +GY+S ++
Sbjct: 123 LAARVGASSRTIERIFVRETHLAFGAWRQRLRLLAALELLAYGEAVTNVALDVGYESASS 182

Query: 240 FITMFKKGLGQTPGRYIA 257
           F+  F++  G TP R+  
Sbjct: 183 FVAAFRETFGTTPARFFK 200


>UniRef50_UPI000050FCF9 AraC family transcriptional regulator n=1 Tax=Brevibacterium linens
           BL2 RepID=UPI000050FCF9
          Length = 272

 Score =  182 bits (463), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 59/232 (25%), Positives = 96/232 (41%), Gaps = 4/232 (1%)

Query: 25  HAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANA 84
            A   E     H H   +L+    G  T T++   W + P   +WIP GV HS    A  
Sbjct: 41  EAMEHETYWSEHSHPTHELLWREAGVGTVTIDQRTWTITPPLGMWIPAGVRHSGWTPAGV 100

Query: 85  ELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ 144
            +           +      + I+PL       L +R         +  L + +  ++  
Sbjct: 101 VVYAAQFSLDNPLVSDRPTAIAITPLL----RLLLDRLQHTDPGTSSYSLTEAMILDVMT 156

Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204
               +L L + S+P I  +   + +GP +  +L  WA    +S R + R    ETGL F 
Sbjct: 157 PADNELLLHMPSNPLIAPIANAIIEGPADASSLQDWARKLGISGRTITRAFEAETGLGFG 216

Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           +W    ++  A+  +  G  V + A  +GY S +AF T FK+  G TPG++ 
Sbjct: 217 RWATTARVQHAVSMISLGGEVDEAAAGVGYRSVSAFTTAFKRITGTTPGQFR 268


>UniRef50_Q7NRR7 Probable transcriptional regulator n=1 Tax=Chromobacterium
           violaceum RepID=Q7NRR7_CHRVO
          Length = 250

 Score =  182 bits (462), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 63/229 (27%), Positives = 96/229 (41%), Gaps = 2/229 (0%)

Query: 27  GTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL 86
           G     +  H H  GQLI    GA+ C  E   W++      WIP GV HS +  A    
Sbjct: 15  GVSRCGTASHVHAVGQLIYLRRGAMLCQSETMRWLMAAGQVGWIPAGVAHSAEPLAELYG 74

Query: 87  CFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
              + + +A   +P     +    L   L+L    R   +      +RL   + DEL Q 
Sbjct: 75  VTAYADSAAYPDLPAEVRVMPAGGLMG-LLLERQLRYEAEPWPGRRQRLAGAIVDELLQL 133

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
                 LP+ +  ++R +   +         L + A     S  +L R   +ETG+SF  
Sbjct: 134 VPLPQQLPLPAERRLRALCRRVLADLGRGWLLDELAVAHGFSRASLTRAFARETGVSFGH 193

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
           W  Q +L+ A++ L  G  V + A  +GY S +AF   F++ LG  PG 
Sbjct: 194 WLAQARLLEAVRLLSGGAMVGETALQVGYQSPSAFCAAFRRHLGMAPGE 242


>UniRef50_Q091X7 Helix-turn-helix, AraC type n=1 Tax=Stigmatella aurantiaca DW4/3-1
           RepID=Q091X7_STIAU
          Length = 279

 Score =  182 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 6/254 (2%)

Query: 13  DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72
           +    AA +FC+      LT+  H HR+ QL+ A  GA+   V+ A W++PPQ A W+ G
Sbjct: 7   NVDASAASSFCLTDEMPPLTTGWHAHRRHQLLYAARGALHLEVDRAQWLLPPQRAAWLRG 66

Query: 73  GVEHSNQVTANAELCFLFIEPSAVTM--PTTCCTLKISPLCRELILTLANRTTTQRAEP- 129
           G  H  +      LC +++EPS V       C    + PL RE+++        +  +  
Sbjct: 67  GTLHRARANHLVTLCTVYLEPSLVPTAPQEECSVFLLPPLAREMLIYSVRWGPERAPDDT 126

Query: 130 MTRRLIQVLFDELPQQPQ--QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187
           +     Q L   L +     Q   LP +  P++   +           +  + A    +S
Sbjct: 127 VAESFFQTLAHLLAEWSSQGQTWRLPRARTPELEKAMAYTLAHLAGPLSFEEAARAAGLS 186

Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKK 246
            R LAR   +E   ++R++    +++ A++ L + G  V + A+ +G++S  AF   F  
Sbjct: 187 GRTLARRFDEEAQTTWRRFLHDARMLRAMELLAQDGARVTQTAYDVGFESLAAFTHAFHA 246

Query: 247 GLGQTPGRYIARLT 260
             G+ P  +  R+ 
Sbjct: 247 FSGERPRDFRQRVA 260


>UniRef50_D0LZ72 Transcriptional regulator, AraC family n=1 Tax=Haliangium ochraceum
           DSM 14365 RepID=D0LZ72_HALO1
          Length = 284

 Score =  181 bits (460), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 62/263 (23%), Positives = 109/263 (41%), Gaps = 22/263 (8%)

Query: 18  AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77
               F +        +P H+HR+ Q++ AL G++   V  A W++PPQ A +IP G EH 
Sbjct: 22  PPACFGLADEMGPRHTPWHRHRRHQILYALTGSLKLEVTEAQWLLPPQRAAFIPAGCEHR 81

Query: 78  NQVTANAELCFLFIEPSAVT-------------MPTTCCTLKISPLCRELILTLANRTTT 124
            +   +A L  ++++ +                +    C   ++ L RE++L        
Sbjct: 82  VRCQRSAALRTVYLDTATFAAGEDAAAPAPVPVIAAGTCVFSVTSLAREMLLYAMRWGPL 141

Query: 125 QRAEPMTRR-LIQVLFDELPQQPQQQ------LHLPVSSHPKIRTMVEMMAKGPVEWGAL 177
           + A+      L    F  L    ++       L LP    P +    E            
Sbjct: 142 RSADDRASEILADAFFSALALLSREWIRADAGLRLPRPRSPDLSRACEHALADLAAASMA 201

Query: 178 GQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDS 236
                   +S R LAR    ET +S+R + +  +++ A++ L + G  V +VA ++G+D+
Sbjct: 202 RAAHAAA-VSPRTLARRFRDETQMSWRSFLRTARVLRAMELLAEPGARVTEVALSVGFDN 260

Query: 237 TTAFITMFKKGLGQTPGRYIARL 259
             AF T F+   G++P  Y  R 
Sbjct: 261 PGAFSTSFRALTGESPSSYQRRF 283


>UniRef50_A8LCQ9 Transcriptional regulator, AraC family n=1 Tax=Frankia sp. EAN1pec
           RepID=A8LCQ9_FRASN
          Length = 270

 Score =  181 bits (460), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 11/263 (4%)

Query: 9   GYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAV 68
            + P R      A  +    DEL S  H+H   ++  A+ G          +++PP YA 
Sbjct: 2   PFLPMRRCVTVGAGTVEHRADELISYWHRHDLHEVEYAVSGLAEIRTPTTHYLMPPSYAA 61

Query: 69  WIPGGVEHSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRT----- 122
           W+P GVEHS  +  N     +F +P+    P +    + + P+ RE++            
Sbjct: 62  WVPAGVEHS-PLLRNVTTIAVFFDPAVFDFPYSRAAVIPVPPVLREMMRYATRWPIGRGE 120

Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182
               A+   R L  V+  +L    +  L LP +  P +R ++        E     +   
Sbjct: 121 DDAEADTFFRALAAVVRGQLAH--EAPLSLPTADDPVVRDVMAYTTDHLAE-VTAARVCR 177

Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFI 241
              +SER L R      G S+R++ +Q++LI A+  L     +V ++A  +G+ S +A  
Sbjct: 178 AVGISERVLRRRFAAVLGQSWREYLRQVRLIRAMALLSTPTTSVGEIATEVGFGSASALA 237

Query: 242 TMFKKGLGQTPGRYIARLTTVSP 264
             F+   G++P  Y  R  T + 
Sbjct: 238 RAFRAWTGESPSAYRDRWLTTAA 260


>UniRef50_C2FVA1 AraC family transcriptional regulator n=1 Tax=Sphingobacterium
           spiritivorum ATCC 33300 RepID=C2FVA1_9SPHI
          Length = 263

 Score =  181 bits (459), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 8/237 (3%)

Query: 31  LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS-NQVTANAELCFL 89
           L +  H H+  QLI   +G +    E     +P +Y  WIP G+ +     +   +L  L
Sbjct: 23  LNTTFHHHQLNQLISPANGVLYLHTEGDTLYIPDKYYAWIPSGMIYKLISKSEQIKLTTL 82

Query: 90  FIEPS----AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
           F++P           T      + L  EL+          +   +    +  L   LP  
Sbjct: 83  FLKPEKNEIQSDFFNTLGVYAPNTLIEELLQFGFRHWQETKHAGLKESCMAALKRILPVV 142

Query: 146 --PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203
                +L +P      +  ++  + K         Q A  F +SER L+R   KETG + 
Sbjct: 143 LSTPLKLFVPAPESEVLMEIITYIQKHLNSPSDFQQLAQRFNLSERTLSRWFKKETGSTI 202

Query: 204 RQWRQQLQLIMALQGLVKGDT-VQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
            Q+ + +++  AL+ +   +  + ++ H +GY+S +AF T+FK+ +G++P  Y  R 
Sbjct: 203 FQFVKSVRVQKALELIESSNMEIVEITHAVGYNSLSAFSTVFKEFMGESPQEYKKRF 259


>UniRef50_B5CUH6 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM
           17135 RepID=B5CUH6_9BACE
          Length = 268

 Score =  181 bits (459), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 103/243 (42%), Gaps = 12/243 (4%)

Query: 26  AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV-TANA 84
            G +E+  P H H K Q+I  L G +   + +  + VP ++  WIPG  EH         
Sbjct: 25  TGWEEIKLPGHAHEKCQIIYTLSGTLHVQIGSTSYFVPEKHIAWIPGSTEHELSSKNRQV 84

Query: 85  ELCFLFIEPSAVTMPTTCCTLKI----SPLCRELILTLANRTTTQRAEPMTRRLIQV-LF 139
            L   ++   A    T      I    S +   L    +  T  ++A+        +  F
Sbjct: 85  SLVIFYLSMDADDKDTALKEFSIYHTNSFIAENLKFIASKGTEIEQADSPDLYTFALSFF 144

Query: 140 DELPQQPQQQLH----LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
             LP   Q        L + +  ++  ++  + +   E   + Q A  F  S RNL+RL 
Sbjct: 145 KLLPSISQDMGFLLKMLAIPNDARLHPILAYLQEHLHENLKMPQLAAHFGFSVRNLSRLF 204

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
             E+G+ F  +   L+++ A++     G T+Q++A+ +G+ +   F  +F++  G +P  
Sbjct: 205 -NESGIRFSYYVNNLRIMRAIELFADGGRTMQQIAYEVGFATPNHFNRVFRQITGVSPNA 263

Query: 255 YIA 257
           ++ 
Sbjct: 264 FVK 266


>UniRef50_A5EPW3 Transcriptional regulator, AraC family n=3 Tax=Bradyrhizobium
           RepID=A5EPW3_BRASB
          Length = 268

 Score =  180 bits (458), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 11/247 (4%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
           E  V               H HR+ QLI A  G +  T     W+VPP  AVW+P    H
Sbjct: 19  EPGVHLIARLYHKGARLDPHMHRESQLIYASRGTMQVTTPQGRWLVPPDRAVWVPARHAH 78

Query: 77  SNQVTANAELCFLFIEPSAVTMP------TTCCTLKISPLCRELILTLANRTTTQRAEPM 130
           +  + A++++  L+ E   +              +++SPL  + IL L            
Sbjct: 79  AIDMLADSQMRTLYFELDWLRQAARGLRLDREFVVQVSPLLHQAILALFAPDGG---AER 135

Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190
              L+++   EL +       +P+   P+ R    ++   P     L   A     S R 
Sbjct: 136 AALLVRLALLELRRAEDSSTFIPLPQDPRARRAALLVLASPATEEDLATLASMVGSSART 195

Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLV--KGDTVQKVAHTLGYDSTTAFITMFKKGL 248
           L+RL   ET LSF+ W Q+ ++  A++ L   +  +V+++A  LGY S  AF   F++  
Sbjct: 196 LSRLFAAETRLSFKAWCQRARIAAAIERLSTDRHLSVKQLAADLGYASVPAFSHAFRQVT 255

Query: 249 GQTPGRY 255
           G+TP  +
Sbjct: 256 GRTPTDF 262


>UniRef50_C7PA31 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga
           pinensis DSM 2588 RepID=C7PA31_CHIPD
          Length = 264

 Score =  180 bits (457), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 11/264 (4%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           MH L     E D H ++   + +H   +   S +H H KGQL     G   C + +  ++
Sbjct: 1   MHLLADYLNEIDVHPDSV--YVMHEKVERKFS-MHSHIKGQLTYVEGGIAFCNMPDKSYV 57

Query: 62  VPPQYAVWIPGGVEHSNQVTAN--AELCFLFI---EPSAVTMPTTCCTLKISPLCRELIL 116
           +P ++ +WIP   EH  Q+  +       L+    +              ++ L  E+I 
Sbjct: 58  IPARHYIWIPKQQEHYMQIRHSKSTTTRNLYFYSQDDHLTPFYNKLGIYPVNDLLLEMIN 117

Query: 117 TLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL--HLPVSSHPKIRTMVEMMAKGPVEW 174
             A             R +  + D LP      L   LP + H ++R +++ +A+   + 
Sbjct: 118 YSARWERHVLPGDPGFRFLSSIKDILPDISTSALPVALPTTQHERLRPVLQYIAQSFDQQ 177

Query: 175 GALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLG 233
             L   +  F +S R L+RL      +SF Q+ Q L+++  ++ +++   T+ ++A+  G
Sbjct: 178 LTLESVSSQFDLSPRTLSRLFTNILDMSFVQYLQTLRVVRGIEMILQTNQTLSEIAYQTG 237

Query: 234 YDSTTAFITMFKKGLGQTPGRYIA 257
           Y S  AF  +F +   + P  +  
Sbjct: 238 YSSIAAFSKVFYQLTNKRPSSFQQ 261


>UniRef50_UPI000197B237 hypothetical protein BACCOPRO_02201 n=1 Tax=Bacteroides coprophilus
           DSM 18228 RepID=UPI000197B237
          Length = 274

 Score =  179 bits (455), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 53/249 (21%), Positives = 112/249 (44%), Gaps = 12/249 (4%)

Query: 20  VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS-N 78
           V      G  E+  P H H K Q+I  L G +   + +  + VP ++  WIP G EH  +
Sbjct: 19  VILIKKTGWKEVNLPGHVHGKCQIIYTLAGTLHVEIGSESYFVPEKHIAWIPQGAEHKLS 78

Query: 79  QVTANAELCFLFI--EPSAVTMPT-TCCTLKISPLCRELILTLANRT--TTQRAEPMTRR 133
             +    +   ++   P     P         + L  E +  +A++     ++ +P    
Sbjct: 79  SNSRQVSMVIFYVSLRPEGKDDPKGEFAIYTANRLIGENLKFIASKGKMIEKQEQPDLYH 138

Query: 134 LIQVLFDELPQQPQQQL----HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
                F+ LPQ    +      L +    ++  ++  +     E   + + A  + +S R
Sbjct: 139 FALGFFNLLPQMSPGKELLLKSLVIPDDSRLYPILRYLTDHVQEELRMDEVALRYNLSTR 198

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGL 248
           NL+RL  +E+ + F  +  +L+++ A++ +   G T+Q++A+ +G++++  F  +F++  
Sbjct: 199 NLSRLF-QESNIHFSSYVNRLRIMRAIELMTDGGRTMQEIAYAVGFNNSNHFNRVFRQVT 257

Query: 249 GQTPGRYIA 257
           GQ+P  Y+ 
Sbjct: 258 GQSPKNYLR 266


>UniRef50_Q2S7S2 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella
           chejuensis KCTC 2396 RepID=Q2S7S2_HAHCH
          Length = 250

 Score =  179 bits (455), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 62/240 (25%), Positives = 98/240 (40%), Gaps = 2/240 (0%)

Query: 21  AFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV 80
              +  G D+ +  +H   +GQL     GAI C  +   W+  P+   WIP G +H  + 
Sbjct: 9   VLRLDIGADQ-SRDLHARSEGQLYWLEQGAIFCRSDRFHWLTAPRQLTWIPPGCQHDARP 67

Query: 81  TANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLF 139
            +      L +       +P     L+   L    +L L               L+QV  
Sbjct: 68  LSTVRGVLLHLREDLTFVLPKEPVALEPHRLLEATLLRLIELCPESDWLERHEHLLQVFL 127

Query: 140 DELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKET 199
            E  +    +  LP+   P++  M   + + P     L   A  +  S R L R  ++ET
Sbjct: 128 WEAREATPLRQRLPMPHDPRLLRMANSLWRAPESNPGLDALALEYGFSRRTLTRKFMQET 187

Query: 200 GLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
           G S  QW Q  +L+ AL+ L   ++V   A  +GY S + F  +FK+  G +PG Y  R 
Sbjct: 188 GASLSQWTQHAKLLRALELLAANESVSSAAFGVGYQSVSTFCAVFKQVFGMSPGDYKRRF 247


>UniRef50_D1BFL9 DNA-binding domain-containing protein, AraC-type n=1
           Tax=Sanguibacter keddieii DSM 10542 RepID=D1BFL9_SANKS
          Length = 280

 Score =  179 bits (455), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 55/251 (21%), Positives = 113/251 (45%), Gaps = 8/251 (3%)

Query: 21  AFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV 80
                 G     +  H H    L     G +   +++A+W + P   +W+P G  H+++ 
Sbjct: 29  VVVADQGVSRPLAAPHSHPDAMLAWCYRGTVWVYLQDAVWRLAPGQGIWVPAGTPHTSRH 88

Query: 81  TANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLF 139
              +  C+ ++  +A+  P  T   + ++   +E++L L         + +  R+  V+ 
Sbjct: 89  EPGSTGCYTYLPDAALVAPVATITRVLVARAVQEMLLHLG---ADDMDDGLRVRIQAVIL 145

Query: 140 DELPQQPQQ----QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
           + L Q   Q       +P+ +  ++R +V+ +   P +     +      + ER + R++
Sbjct: 146 EMLQQPSLQASDGWGEVPLPADERLRPLVQAVLADPGDPRTARELFDAHGLHERTVLRVL 205

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            ++ G++F +WR  +++  A + LV G  V  VAH  GY +T+AF   FK+  G TP  +
Sbjct: 206 QRDVGMTFARWRAGVRMTQAARMLVDGTPVGLVAHRTGYGTTSAFSAAFKQRFGMTPREH 265

Query: 256 IARLTTVSPQS 266
           +AR+       
Sbjct: 266 VARVRANPAHH 276


>UniRef50_B7H290 Bacterial regulatory helix-turn-helix protein, AraC family protein
           n=15 Tax=Acinetobacter RepID=B7H290_ACIB3
          Length = 254

 Score =  179 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/229 (27%), Positives = 113/229 (49%), Gaps = 2/229 (0%)

Query: 30  ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH-SNQVTANAELCF 88
           E     H    G    +L+G +   VE  +++ PP Y +WIP    H S  +        
Sbjct: 24  EDIVRPHASLWGDFNFSLNGILEIQVEEQIYLSPPSYGLWIPPQTVHQSTHIDHEIHYIC 83

Query: 89  LFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147
           + + P   + +   C    I P  R L+L +  +            L+QVLFD+L Q P 
Sbjct: 84  IRLHPRLCSILGDICRCFSIQPFFRTLVLQILEQQKQTEKPEYLEHLLQVLFDQLQQAPA 143

Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207
              +LP + HP +  ++E ++   +   +L Q    F++S+R+L RL  +E  LS  +WR
Sbjct: 144 YSHYLPQTRHPVLLPILEKLSDPLLFNLSLQQLLQNFSVSDRHLLRLSQQELQLSLSEWR 203

Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
            + +++ A+  + +G +++++A+ LGY  +++FI  FK+  GQTP +  
Sbjct: 204 NRAKIVYAIHQIRQGTSIKRLAYDLGYQHSSSFIEFFKRYTGQTPVQIR 252


>UniRef50_A6GAR4 Putative transcriptional regulator n=1 Tax=Plesiocystis pacifica
           SIR-1 RepID=A6GAR4_9DELT
          Length = 262

 Score =  177 bits (450), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 98/246 (39%), Gaps = 5/246 (2%)

Query: 13  DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72
           D     A+ F I        S  H HR+ QL+ A+ G +     +  W++P   A WIP 
Sbjct: 10  DVDRARALGFGIDETYRGFVSDWHSHRRHQLLHAVEGNLELEDSHGRWLLPEAQAAWIPA 69

Query: 73  GVEHSNQVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131
           G  H       A L  L++ PS V   P      ++  L   L+         +R +   
Sbjct: 70  GQRHRVSSAG-ARLQTLYLAPSLVAQPPAETAVFQLPALGHALLARALGWPHHRRLDRRA 128

Query: 132 RRLIQVLFDELPQQ--PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
           R L   + +E            LP      +   +  +     +   L + A    +S R
Sbjct: 129 RALFVCVAEEFAAWSLEPGPWRLPQPRSQALAAAMRHVVDNLEDGPTLAEAARQAGVSAR 188

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGL 248
           +L R    ETG SFR++    ++I A + L + G  V  VA+ LGY S +AF T F   +
Sbjct: 189 SLERRFRAETGSSFREFLLTARMIEAQRLLREPGARVSSVAYRLGYSSPSAFSTAFLARV 248

Query: 249 GQTPGR 254
           GQ P  
Sbjct: 249 GQRPKA 254


>UniRef50_C5PU57 AraC family transcriptional regulator n=1 Tax=Sphingobacterium
           spiritivorum ATCC 33861 RepID=C5PU57_9SPHI
          Length = 271

 Score =  176 bits (446), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 100/237 (42%), Gaps = 8/237 (3%)

Query: 31  LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS-NQVTANAELCFL 89
           L +  H H+  QLI   +G +    E     +P +Y  WIP G  +     +   +L  L
Sbjct: 28  LNTSFHHHQLDQLISPENGVLYLHTEGDTLYIPDKYYAWIPSGTIYKLISKSEQIKLRTL 87

Query: 90  FIEPSAVTMPTTC----CTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ- 144
           F+EP                  + L  EL+    +    +R   +    I  +   LP  
Sbjct: 88  FLEPEKNEFHADFFNSLAVYAPNTLIEELLQFGFSHWKKERDPELKEYCIAAIRHILPVA 147

Query: 145 -QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203
                +L +P  +   ++  +  +         +   A  F +SER L+R   KETG + 
Sbjct: 148 LSTPLKLFVPAPASEVLQESITYIQNHIKGPLDIQHLAQKFHLSERTLSRWFKKETGSTL 207

Query: 204 RQWRQQLQLIMALQGLVKGDT-VQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
            Q+ + +++  AL+ +      + ++ H +GY+S +AF T+FK+ +G++P  Y  R 
Sbjct: 208 FQFVKSVRVQKALELIENSRMDIIEIMHAVGYNSLSAFSTVFKELIGESPQEYKKRF 264


>UniRef50_Q28SV1 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1
           RepID=Q28SV1_JANSC
          Length = 252

 Score =  175 bits (444), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 95/223 (42%), Gaps = 4/223 (1%)

Query: 39  RKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT- 97
            +  L+ A+ GA+  +V    W++PP +A W+P     S  +      C +   P   T 
Sbjct: 26  DRDYLLYAIRGALRVSVAGESWLLPPSFAAWLPANTPISVDIDKPVTTCSVLARPGLCTG 85

Query: 98  MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL--PVS 155
           +P   C  ++SP+ R++I    +                 L         + + +  P +
Sbjct: 86  LPEKACVFQMSPMARQMIHYCKDWGPDAAHPAQAEGFFLALLHVCADLAVKSVDVKRPTA 145

Query: 156 SHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMA 215
           + P +R  +++      +     + A    +SER++ R    + G+++ Q   QL++I A
Sbjct: 146 TDPVLRKAIDITEAHLAQAITANEIARKVNLSERSMQRHFQMDVGMTWSQTLTQLRMIHA 205

Query: 216 LQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           +  L +G  ++ ++A   G+ S +AF   F+     TP ++  
Sbjct: 206 VALLAEGKLSIIQIAGYTGFQSLSAFNRAFRTFAATTPTKFRK 248


>UniRef50_D0KLM1 Transcriptional regulator, AraC family n=2 Tax=Enterobacteriaceae
           RepID=D0KLM1_PECWW
          Length = 218

 Score =  175 bits (443), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 2/206 (0%)

Query: 30  ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89
           + ++P H+H  GQL     G I      A W V P    W P  + H   V  N     L
Sbjct: 11  QHSTPWHKHSSGQLYWLREGIIVIETVLAQWTVTPGSVGWFPPDLNHRAWVPGNVIGNSL 70

Query: 90  FIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQ 148
           +++P S+   P              L+    N +  + +E     +  +L  E+ Q  + 
Sbjct: 71  YLDPVSSNHFPYHAGIYGADHFIIALLER-CNNSHIKHSEEYENLISNLLGYEIRQCSEL 129

Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208
            L L + +  + R +   + K P       Q A  + +S RNL+RL  ++TGLSF QWRQ
Sbjct: 130 PLELKLPTDRRARNVASELLKNPGCILDQSQLAQKWGLSVRNLSRLFNQQTGLSFSQWRQ 189

Query: 209 QLQLIMALQGLVKGDTVQKVAHTLGY 234
           Q +++ +LQ ++ G  V +VA   GY
Sbjct: 190 QAKVVASLQWVLLGLPVNEVASLSGY 215


>UniRef50_A6ED21 Transcriptional regulator, AraC family protein n=1 Tax=Pedobacter
           sp. BAL39 RepID=A6ED21_9SPHI
          Length = 271

 Score =  174 bits (440), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 10/253 (3%)

Query: 10  YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69
           +  D H E    +  H+  ++     H H+KGQL     G I        + +P ++ VW
Sbjct: 11  FNLDEHTE--TTYVWHSKFEDRFKD-HHHKKGQLTYVEGGVIFLYTREQSYFIPARHYVW 67

Query: 70  IPGGVEHSNQVT-ANAELCFLFIEPSAV---TMPTTCCTLKISPLCRELILTLANRTTTQ 125
           +P GV H  +    +  +  ++         +         ++ L  E++    N     
Sbjct: 68  VPAGVTHHLEHRYRSTIVRNVYFNAKNEIDHSFFDHIGIYPVNDLLLEMLKFSENWNGNI 127

Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHL--PVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183
                    ++ L   LP   +  L +  P + + ++R ++  + +   E   L + A  
Sbjct: 128 YPGSFEYGFLETLKSILPAISKHPLPIVVPTTDNERLRPVLWYIRQHLSEELTLEKIALE 187

Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFIT 242
              SER L+RL       SF Q+ + +++  A++ L++ D TV ++A+ +GYDS  AF  
Sbjct: 188 TGFSERTLSRLFQASLKTSFFQYLKLVRMTRAMEKLLETDRTVTEIAYEVGYDSIAAFSN 247

Query: 243 MFKKGLGQTPGRY 255
            F K  GQ P  +
Sbjct: 248 TFYKMTGQRPSAF 260


>UniRef50_C7PGY2 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga
           pinensis DSM 2588 RepID=C7PGY2_CHIPD
          Length = 278

 Score =  173 bits (439), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 50/251 (19%), Positives = 103/251 (41%), Gaps = 8/251 (3%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           P+   +A   F IH   ++   P+HQH K QL     G     + + L ++P ++  WIP
Sbjct: 22  PEIEQQATSIFVIHEKCEKQI-PLHQHSKSQLFYVDGGIAYIRLADQLLVIPSRHYCWIP 80

Query: 72  GGVEHSNQVTAN-AELCFLFIE---PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRA 127
            G+ HS  +  N   L  +       +            I+ L  E++            
Sbjct: 81  AGIPHSLTIGQNGTHLRSILFTTKGENKHAFYNDVGIYPINDLLIEMMRYTEQWQGHILP 140

Query: 128 EPMTRRLIQVLFDELPQQPQQQL--HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185
           +      +Q +   LP+   + L   LP + + ++  ++  + +   +   L   +  F 
Sbjct: 141 DDERFMFLQSIKSILPKISIRHLPIALPYTENKRMLQIISYIEENISDKHTLETISKRFG 200

Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMF 244
           +S+R L+R       +SF Q+ + L+++ A + + +   ++ ++A+  GY S  +F   F
Sbjct: 201 LSDRTLSRFFKDTLKISFLQYLKLLRMVKAFELIQQKAHSLSEIAYLTGYQSLASFSYTF 260

Query: 245 KKGLGQTPGRY 255
            +     P  +
Sbjct: 261 YQVTNMRPSEF 271


>UniRef50_D1WSG5 Transcriptional regulator, AraC family n=3 Tax=Streptomyces
           RepID=D1WSG5_9ACTO
          Length = 265

 Score =  171 bits (434), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 8/232 (3%)

Query: 34  PVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP 93
           P H H   Q +    G I  T       + P  A+WIP GV HS +   ++ +     EP
Sbjct: 40  PTHVHVFHQFLYVPLGRIVVTALGRDHELSPSVALWIPAGVPHSARFDPDSLVVAETFEP 99

Query: 94  SAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL 152
               +P T   ++ +S   R+L+L+    +     +P        +F  L    +  L L
Sbjct: 100 DRHRLPYTEITSVNVSDAQRQLLLSRMRSSEVTEEDP-------AVFAVLCSGHRDVLPL 152

Query: 153 PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQL 212
           P  +     T+   + + P +     +WA     S  +L R    ETGL+F +WR +L+L
Sbjct: 153 PRPTGRAAATVAGELMRNPGDPRTASEWAEGLYTSSTSLRRAFRAETGLAFSEWRTRLRL 212

Query: 213 IMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSP 264
             +L  L  G  V  VA  +G+ ST  +I  F++  G+TPG Y+ R  + + 
Sbjct: 213 NHSLHLLAAGHMVSTVAARVGFVSTNGYILAFRRYFGETPGAYVKRSASRTA 264


>UniRef50_B5H317 AraC-type DNA-binding domain-containing protein n=1
           Tax=Streptomyces clavuligerus ATCC 27064
           RepID=B5H317_STRCL
          Length = 253

 Score =  171 bits (433), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/256 (25%), Positives = 104/256 (40%), Gaps = 32/256 (12%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN--------- 78
            + +  P  +H +  L     G +        W++PP  A+WIP GV H+          
Sbjct: 2   PEGVWQPTRRHPRHLLARVPGGLLAVRTGAGAWLLPPSTALWIPAGVPHATAVLTTPAAP 61

Query: 79  ---------------QVTANAELCFLFIEPSAVTMP---TTCCTLKISPLCRELILTLAN 120
                          +++       L  +P   T P        +++ PL   LI  L  
Sbjct: 62  SAPAAPPAPTAVAAARISGPV--VDLAADPLTTTGPGTWRDPTAVRVEPLLSALIDHLGR 119

Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180
              T  A    RR  +V+ D L   P   +       P+ R +   +A  P +   L  W
Sbjct: 120 PGLTPDA---RRRAEEVVLDVLVPLPVISVAAAEPQDPRARAVARALAGDPRDNRGLPAW 176

Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240
                 S R LARL + ETGL+F QWR++L++  A+  L     ++ VA  +GY S ++F
Sbjct: 177 GSQVGASARTLARLFIAETGLTFGQWRERLRMQAAMPLLASELPIEAVARRVGYGSASSF 236

Query: 241 ITMFKKGLGQTPGRYI 256
           +  F + +G TP +Y 
Sbjct: 237 VAAFHRIVGLTPRQYF 252


>UniRef50_A3XQJ9 Probable transcription regulator protein n=1 Tax=Leeuwenhoekiella
           blandensis MED217 RepID=A3XQJ9_9FLAO
          Length = 261

 Score =  170 bits (430), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 54/251 (21%), Positives = 110/251 (43%), Gaps = 9/251 (3%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
           H     +  H+  +E   P+H H+K Q+     G      +N  +  P ++ +WIP G+E
Sbjct: 10  HYPDSIYVHHSKIEE-QLPMHSHKKHQISYVEGGVAFLNTKNNSFFFPARHFIWIPAGLE 68

Query: 76  HSNQVTANAELCF-LFIEPSAVTMPT---TCCTLKISPLCRELILTLANRTTT-QRAEPM 130
           H+     + ++   LF     +             +S L  E+I           R +  
Sbjct: 69  HNVTSRTSVKMVHNLFFPADLIPETEILKKAGIFPVSNLLMEMINYTQRWNGDILRTDAE 128

Query: 131 TRRLIQVLFDEL--PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSE 188
               +  L + +    +    + LP +++  +R +++ +     +   L + A  F  S 
Sbjct: 129 AFEFLIALRNIILEVAKTPFPVVLPTTTNEMLRPILKYIHLNVDQPLYLEEVAAHFGYSA 188

Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKG 247
           R+L+RL  K    SF Q+ +  ++I +++ L+K D ++ +VA+  GY+S +AF   F + 
Sbjct: 189 RSLSRLFQKNIETSFLQYVKLTRIIKSIELLLKTDLSISEVAYASGYNSLSAFSYAFNQI 248

Query: 248 LGQTPGRYIAR 258
           + Q+P  +  +
Sbjct: 249 VNQSPAAFKKQ 259


>UniRef50_D1BHB2 Transcriptional regulator, AraC family n=10 Tax=Actinomycetales
           RepID=D1BHB2_SANKS
          Length = 279

 Score =  169 bits (429), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 95/231 (41%), Gaps = 4/231 (1%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
           T +     H H   +L+    GA T TV    W V P   +W+P GV HS    A     
Sbjct: 53  THDTWWEEHSHPTHELLWNERGASTATVGPRTWTVTPSIGLWVPAGVRHSGWTPAGTWQR 112

Query: 88  FLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147
              +    V   +         +    +LTL            +R   + +  ++     
Sbjct: 113 AAQLNTRTVRSISETPV----AVDLTPLLTLLLDRLDSDLGEASRATTEAMVLDVLVPAP 168

Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207
            +L L   +   +  +VE +   P +   L  WA    +S R + R  + ETGL F QW 
Sbjct: 169 TELLLQSPTSELLAPVVETVLADPADPTTLAAWAARLGVSTRTVTRTFLAETGLGFSQWV 228

Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
              +   A+  L +G+ ++ VA  +GY S +AF T F++  G +PGR+ AR
Sbjct: 229 ATARTQHAIALLARGEEIEDVALLVGYGSASAFGTAFRRVTGVSPGRFRAR 279


>UniRef50_A9GKK5 Transcriptional regulator, AraC family n=1 Tax=Sorangium cellulosum
           'So ce 56' RepID=A9GKK5_SORC5
          Length = 304

 Score =  169 bits (428), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 62/259 (23%), Positives = 104/259 (40%), Gaps = 8/259 (3%)

Query: 15  HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGV 74
            H  A AF             H H + QL+  L G     VE+A +++PPQ A  IP G 
Sbjct: 47  DHAGARAFSYEDELRGAVYGWHTHARHQLLCPLAGTARLEVEDASFLLPPQLAALIPAGE 106

Query: 75  EHSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRR 133
            H+     +A +  ++ EP+A   P       +I  L RE+++        +R +     
Sbjct: 107 RHATTC-GDASIVSIYFEPAAFPSPLAAVRIFEIPALLREMVIYARRWPVARRPDDAAAN 165

Query: 134 LIQVLFDELP---QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190
                  ++            LP      ++  +E   +       L + A F   +ER 
Sbjct: 166 TFFAAMADIIGPLLDRGATYRLPRGKTRPVQRAIECALRDVAS-ADLPRAAAFAGATERT 224

Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLV-KGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
           L R   +ETG+++R +  + +++ A+  L     +V +VA  +G+ S  AF   F+   G
Sbjct: 225 LRRRFREETGVTWRGFVTRARVLRAIDLLSGPSASVTQVALDVGFQSLGAFAAAFRAVTG 284

Query: 250 QTPGRYIARLTTVSPQSAK 268
           QTP  +  R    SP    
Sbjct: 285 QTPSEFR-RTARPSPGGGH 302


>UniRef50_C6C927 Transcriptional regulator, AraC family n=2 Tax=Dickeya dadantii
           RepID=C6C927_DICDC
          Length = 271

 Score =  167 bits (424), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 63/235 (26%), Positives = 101/235 (42%), Gaps = 6/235 (2%)

Query: 31  LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLF 90
             +P H+H +GQ +L   G +      + W++    A+WIP    H  +     EL  ++
Sbjct: 24  HENPPHRHPQGQFVLVRQGLLQGFSSQSSWLLKAGMAIWIPPETVHWGETAHQVELLVVY 83

Query: 91  IEPSAVTMPTTCCTLKISPLCRELILTLANR---TTTQRAEPMTRRLIQVLFDELPQQPQ 147
             P      T    L        LI+ L  R     +   +    RL+Q+LF+E+   P 
Sbjct: 84  ATPEQCQAITCPLKLM---NASCLIIGLCERLAAPNSALPDTRRERLLQLLFEEIADSPS 140

Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207
             L LP+   P+++ + + +   P     L  W      + R L+RL +++TGLSF  W 
Sbjct: 141 SPLSLPLPDDPRLKKITDALIATPSLRHNLDSWGKHAGATARTLSRLFMRQTGLSFGAWH 200

Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262
            +L L  A + L  G     +A  LG+    AF   FK+  G TPG+   +  T 
Sbjct: 201 DRLLLSEAWRQLHAGYNNDALALHLGFSCGDAFGHWFKRIAGLTPGQARRQCQTA 255


>UniRef50_C7R5F1 Transcriptional regulator, AraC family n=1 Tax=Jonesia
           denitrificans DSM 20603 RepID=C7R5F1_JONDD
          Length = 267

 Score =  167 bits (423), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 5/220 (2%)

Query: 41  GQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS---AVT 97
             L    HG +   +    ++V     +W+P  V H+ + + +A L    +       ++
Sbjct: 45  HMLAWVPHGTLRVDIAGRTYLVTHTRLLWVPANVTHTLRPSHDALLIPFMMPTDPDTTIS 104

Query: 98  MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSH 157
             TT  T++ +     LI  LA    +   E    R +  L D LP+  +  + + +   
Sbjct: 105 TWTTVHTIRATGALHSLIRVLAQPALSTAHE--YSRALDQLLDVLPRLKELDIDVALPCD 162

Query: 158 PKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQ 217
           P+  T+   + + P    +L +WA     S + L RL V++TG++F +WR ++++  AL 
Sbjct: 163 PRAATVATALIENPAHPRSLEEWAKVCYTSAKTLQRLFVQQTGVTFPEWRTRVRVRTALD 222

Query: 218 GLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
            L +G TV  VA  +GY + + FI  F +  G TP RY+ 
Sbjct: 223 LLHEGWTVHSVATRVGYSTASGFIAAFSRITGHTPARYMR 262


>UniRef50_C5PVX4 AraC family transcriptional regulator n=2 Tax=Sphingobacterium
           spiritivorum RepID=C5PVX4_9SPHI
          Length = 258

 Score =  167 bits (422), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 93/227 (40%), Gaps = 5/227 (2%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV-TANAELCFLFIE- 92
           VH HR  Q +    G         + ++P  +A WIP  + H      ++ +L  +F   
Sbjct: 31  VHGHRLAQFVYVEKGFQYLEAGGKIHLLPQNHAAWIPPNMLHKTSTDASHVQLRTIFYRM 90

Query: 93  PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELP--QQPQQQL 150
                        +++P+ +E+IL                  ++ +  ELP   +    L
Sbjct: 91  EDIPEFYNELRIFQVAPVLKEMILYAEKWNRIADYSIEEDTFLKAIVLELPNFWKHSLSL 150

Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210
           H+P      +  +   +     +   + + A    +S R+L R+   ETG++  ++ Q +
Sbjct: 151 HIPAPMDEHLIKVCAYIHSHLADNRPVAEIAEQHYLSLRSLQRIFKSETGITLAKYMQMV 210

Query: 211 QLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           ++I +++ L  G  TV +VAH +GY S  AF   F   +   P  ++
Sbjct: 211 RIIKSVELLGTGRYTVSQVAHLVGYKSVQAFSDSFYMIIKDRPHTFL 257


>UniRef50_C0YKT6 AraC family transcriptional regulator n=3 Tax=Bacteroidetes
           RepID=C0YKT6_9FLAO
          Length = 267

 Score =  162 bits (411), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 91/223 (40%), Gaps = 5/223 (2%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANA--ELCFLFIEP 93
           H+H + QL     G     ++  +++VP  + +WIP   +H     A     + FLF   
Sbjct: 36  HRHSRAQLTFVEEGYQYFHIDRKIYLVPQHHVIWIPSEKDHKITSEAQTVNLMVFLFKSV 95

Query: 94  SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ--PQQQLH 151
                          P+ +E++L  +                + +   LP        L 
Sbjct: 96  FEDEFYKNVQVFAAPPVLKEMLLYASKWNQLLDENEEQDVFFKAILKSLPNFCKESSSLE 155

Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211
           +PV +  ++  +   +         +   A    MS R+L R+   ETG++ +++ Q  +
Sbjct: 156 IPVPADTRLIPVCNEINTHFKYNLDIDSLAEKAQMSVRSLQRIFKNETGITLQKYLQLTR 215

Query: 212 LIMALQGL-VKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253
           ++ +++ +  +  T+ +VA+ +GY S +AF + +   + + P 
Sbjct: 216 ILKSIELIDTRQYTLSEVAYKVGYQSLSAFTSSYFTIMQEKPK 258


>UniRef50_Q1QZK4 Transcriptional regulator, AraC family n=1 Tax=Chromohalobacter
           salexigens DSM 3043 RepID=Q1QZK4_CHRSD
          Length = 266

 Score =  161 bits (408), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/267 (20%), Positives = 117/267 (43%), Gaps = 7/267 (2%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           M  +   + +  D   ++A+A   +   +     +H H   Q+ +      T  + + + 
Sbjct: 1   MTAQNGQDVWHEDILDDSAIAVLSYPIGEMQRDQLHSHGYHQIAMCEQPGATLLLGSQVV 60

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120
            +P   A+ +P G +H+        +  ++ + +  +  T+  +L ++ L +ELI  ++ 
Sbjct: 61  SIPWNGALLVPSGTDHALTSETRCVIRCIYFKAALPS--TSIGSLFLNRLTKELIKEIST 118

Query: 121 RTTTQRAEPMTRRLIQV-LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
              T      +RRL++  L+D++ Q         +     +R + + +   P +   +  
Sbjct: 119 SYVT----ERSRRLMEACLYDQIGQLLWSSGSGMMPPSRSLRVICKHIFDTPEDDTPVAT 174

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
            A    +SER+L RL   E G +  Q R + ++  A Q L  G  V+ +A  +GY S +A
Sbjct: 175 LAKDAGLSERSLRRLARDELGCTISQIRTRCRIYKATQLLQAGVPVKLIAADVGYQSNSA 234

Query: 240 FITMFKKGLGQTPGRYIARLTTVSPQS 266
           F + F++ +G +P R+ A        S
Sbjct: 235 FFSAFREIMGMSPARFQAECAASRSLS 261


>UniRef50_B3JKA4 Putative uncharacterized protein n=1 Tax=Bacteroides coprocola DSM
           17136 RepID=B3JKA4_9BACE
          Length = 267

 Score =  159 bits (402), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 98/243 (40%), Gaps = 13/243 (5%)

Query: 26  AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS-NQVTANA 84
            G + +    H H K Q+I  L G +        + VP ++  WIP    H  +  +   
Sbjct: 25  TGWEAINFQEHAHEKFQIIYTLSGTLHVETGGVNYFVPEKHIAWIPEKASHKLSSNSRQV 84

Query: 85  ELCFLFIEPSAVTMP--TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDEL 142
            L   +I  +               + +  E +  +A++            L        
Sbjct: 85  SLIIFYINLNITPDDGKNRFSIYSTNGIIAENLKFIASKGKV-ITRGKQTDLYNFALSFF 143

Query: 143 PQQPQQQLH-------LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
              PQ  L        L + +  ++  ++  + +   E   + Q A  + +S RNL+RL 
Sbjct: 144 NLLPQMTLGADFLLKTLVIPNDSRLHPILNYITEHIHEDLNMEQIASQYNLSVRNLSRLF 203

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
              +G+ F  +   L++  A++ L  GD TVQ+VA+ +G+++   F  +FK+  G++P  
Sbjct: 204 -NTSGIHFSNYVNHLRITRAIELLTDGDNTVQEVAYKVGFNTPNNFNRVFKQVTGKSPKT 262

Query: 255 YIA 257
           YI 
Sbjct: 263 YIK 265


>UniRef50_A5KTY3 Transcriptional regulator, araC family protein n=5 Tax=Vibrionales
           RepID=A5KTY3_9GAMM
          Length = 262

 Score =  158 bits (399), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 53/222 (23%), Positives = 93/222 (41%), Gaps = 5/222 (2%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
               +S VH H    L+    G    + +    +  P   ++IP GV H       +++ 
Sbjct: 37  ESHYSSEVHSHDYSHLVFIHQGCQIISTDKDSLLSMPGSLIYIPAGVPHRADALKQSQVS 96

Query: 88  FLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ-- 145
            L +   ++   T  C L ISP+  +L     N    Q+ EP     IQVL D+  +   
Sbjct: 97  LLRLPLGSIPELTEICILDISPIVTQLFSLWKNGGPEQKLEP---HYIQVLMDQCTRCKA 153

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
               L        ++  +++ ++  P    ++   +     S R L RL +     SFR+
Sbjct: 154 VDNPLIAKEGMDRRLLPVIDALSNKPSIKLSISDLSKQTGASVRTLNRLFLTSFKASFRE 213

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247
            RQ++ +  A + + KG +  ++A  L Y S +AF T FK+ 
Sbjct: 214 VRQKVVMERAEKMMAKGISATEIAFELEYSSLSAFSTAFKEH 255


>UniRef50_Q5WI14 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii
           KSM-K16 RepID=Q5WI14_BACSK
          Length = 275

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 56/252 (22%), Positives = 109/252 (43%), Gaps = 16/252 (6%)

Query: 22  FCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT 81
           F   A T E   P+H H   +LI  ++G++    E  +  +  +  ++I   V HS Q  
Sbjct: 19  FIFQARTTERVIPMHFHSNMELIYCINGSLRVWHEGKVTTLMDKDMLFINSNVPHSTQSL 78

Query: 82  ANAELCFLFI-------EPSAVTMPTTCCTL--KISPLCRELILT---LANRTTTQRAEP 129
               +  L+        E   + + T+   L  ++    R L++    L   T T     
Sbjct: 79  TENRVLVLYFPKSFFASEQVLIQLNTSEEQLDEQVLSNLRTLLMEIYNLHYSTGTYDYIL 138

Query: 130 MTRRLIQVLFDELPQQPQQQLHLP---VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAM 186
              R+I++ +       Q     P    S   KI+T+++ + +   E  +L + A     
Sbjct: 139 AQSRIIELKYWLARHFSQTAELSPATSRSDRQKIQTILDFIKEHYTENISLAETARICGY 198

Query: 187 SERNLARLIVKETGLSFRQWRQQLQLIMALQGL-VKGDTVQKVAHTLGYDSTTAFITMFK 245
           SE  L+R+  + TG +F +++Q L L  A+  L     ++ ++++  G+ +  +F  +FK
Sbjct: 199 SEAYLSRMFHEYTGQTFTEYKQILCLEKAIDLLDTTNKSLTEISYETGFPNVKSFRKVFK 258

Query: 246 KGLGQTPGRYIA 257
           + +G+TP  Y  
Sbjct: 259 EVMGKTPYEYKK 270


>UniRef50_Q1LNA3 Transcriptional regulator, AraC family n=1 Tax=Cupriavidus
           metallidurans CH34 RepID=Q1LNA3_RALME
          Length = 197

 Score =  155 bits (391), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 1/186 (0%)

Query: 74  VEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTR 132
           + HS +V          + P  ++ +P      + S L   ++  L     +  ++    
Sbjct: 1   MTHSARVHGTMSGWVGHLAPELSLDLPGRPTAFRQSALSAAILERLPGSGVSSASDKREL 60

Query: 133 RLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192
           RL++ L DEL   P Q + LP     ++  +   +        +L   A    MS R+L 
Sbjct: 61  RLLEALVDELGLLPPQPMCLPYPKTSRLADIARKIIDDLAVANSLDDMAALAFMSRRSLT 120

Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252
           R    ETG+S  +WR   ++  A+Q L  G +V  +A+TLGYD  + FI  F    G TP
Sbjct: 121 RQFRAETGMSIVEWRDAARMQRAVQLLAAGHSVTSIAYTLGYDGASRFIDKFSATFGVTP 180

Query: 253 GRYIAR 258
            ++  R
Sbjct: 181 KQFSLR 186


>UniRef50_C3JMH4 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus
           erythropolis RepID=C3JMH4_RHOER
          Length = 538

 Score =  152 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 16/240 (6%)

Query: 43  LILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS--AVTMPT 100
           L   L G+      + ++ VP    +WIP GV +S +  +++    + + PS      P 
Sbjct: 31  LFWVLAGSGRVRTGSTVYEVPAGELLWIPAGVRYSMETDSDSVAFPILLPPSNGVSAGPA 90

Query: 101 TCCTLKISP-----LCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP-V 154
           T   L++ P     L  E +  L                   LF+ + +       LP +
Sbjct: 91  TVTRLRVPPGWEDRLIHEFVHNLGYLRGDAAHPSS-------LFEMITRADDGATSLPQL 143

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
               +   +   + + P       Q+A    +S R L R  V+ETGL+F +WR + ++  
Sbjct: 144 PQSREAFEIAHALLRTPGTDDTEAQFAKRAGISIRTLQRYFVEETGLTFTRWRLRARIAA 203

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR-LTTVSPQSAKPDPRQ 273
           +L+ L +   +  +A+ +G+++ + F   F+  +G++P  Y  R L+  + +S   D  Q
Sbjct: 204 SLEYLKQDREIGWIANEVGFETGSGFTRAFRAQMGESPSDYRRRALSGPTDRSVDTDNDQ 263



 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 86/239 (35%), Gaps = 13/239 (5%)

Query: 44  ILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTM--PTT 101
           +    G     V +  W +    A+ +P GV ++  V   + L  L    S  +      
Sbjct: 298 VWVYRGQARVDVADRSWELRTGEAMILPAGVLNTVTVPTGSLLLPLGFRSSNGSTVSADA 357

Query: 102 CCTLKISPLCR-ELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP-QQQLHLPVSSHPK 159
             T++ SP     L+ T     T  R            FD +   P  Q +     +   
Sbjct: 358 LETVQFSPADELALLHTFVAAYTPLRPRGHDSATA---FDIIATGPLAQPVSNTSPADSI 414

Query: 160 IRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGL 219
              +   +A  P +   L +WA  F      L R    ETG ++ QWR   ++  A   L
Sbjct: 415 ATRLAATIAARPADPRTLDEWAQEFGTDAARLRREFRIETGTTYPQWRSLSRMTQARTQL 474

Query: 220 VKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVS------PQSAKPDPR 272
             G     V+  LGY    AF   F+   G +P R+ A+    +      P++A+P  R
Sbjct: 475 QLGVAPGTVSRNLGYAHLPAFSRAFRTAHGISPQRFQAQSVERALWLRSVPRAAEPSAR 533


>UniRef50_UPI000197B111 hypothetical protein BACCOPRO_01534 n=1 Tax=Bacteroides coprophilus
           DSM 18228 RepID=UPI000197B111
          Length = 267

 Score =  151 bits (381), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 92/237 (38%), Gaps = 7/237 (2%)

Query: 26  AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN-QVTANA 84
            G +E+   +H H + Q+I  L G +   VE     V   + VWIP G+ H         
Sbjct: 30  TGREEVDLYLHMHNRHQIIYILSGTLHIEVEGVNHFVTDHHLVWIPAGLSHRLPSNNRQI 89

Query: 85  ELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ 144
            L   +     V             L R L       +  +R +P            LP 
Sbjct: 90  SLLTSYFYAEKVRNDRFAAYQTDEMLARNLKFISQQGSVIRREKPEIFTFSMSFLCMLPL 149

Query: 145 QPQQQLHLPVS----SHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETG 200
             ++              ++  ++E +     +  ++   A  F  S RNL RL    +G
Sbjct: 150 VCRKASFPTQPFIIAHDNRLLPVLEYIKANLGKDLSIENVASHFGFSVRNLTRLFTN-SG 208

Query: 201 LSFRQWRQQLQLIMALQGLVKG-DTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           + F  +    +++ A++ L      +++ A+ +G++S  +F  +F++  G++P +YI
Sbjct: 209 IRFVHYLNYQRVVRAIEILTDNVMNIEQTAYEVGFNSPNSFSRVFRQITGESPSKYI 265


>UniRef50_A0KFD0 Transcriptional regulator, AraC family n=1 Tax=Aeromonas hydrophila
           subsp. hydrophila ATCC 7966 RepID=A0KFD0_AERHH
          Length = 230

 Score =  151 bits (381), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 7/231 (3%)

Query: 24  IHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTAN 83
                    + +H H   Q      G    + + A  ++       IP G+ H  +V  +
Sbjct: 5   YRDYPQGALTALHCHGGSQFCYLHRGGGVISSQAAGVLLVAGQLCLIPAGLAHEFRVLRH 64

Query: 84  AELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELP 143
           + L  ++++   +   +   T ++SPL   L   LA          +    + VL  EL 
Sbjct: 65  SRLSLIYLDD--LDGGSELTTRQVSPLLAGLFERLA----DMAEPGLRDAYLTVLAAELR 118

Query: 144 QQPQQQ-LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202
           Q P      L  +   ++  ++E + + P     L + A     S R L RL  ++ G S
Sbjct: 119 QAPVAAGFMLSAALDVRLLRVLERVCRHPSIEYGLAELAADSGASVRTLNRLFSQQLGCS 178

Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253
           FRQWRQQ+ +  A Q   +G  + ++A  LGY   +AF   F + L +  G
Sbjct: 179 FRQWRQQVVMGRARQLQQQGQPLSRIALELGYGDFSAFSHAFNRFLREPAG 229


>UniRef50_Q3HKF1 Transcriptional regulator, AraC family n=2 Tax=Rhodobacteraceae
           RepID=Q3HKF1_RHOS4
          Length = 254

 Score =  150 bits (379), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 6/260 (2%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           M R  + G+  D    + V   I + T       H H +GQL       +T      L +
Sbjct: 1   MQRDEIGGFAED---GSPVIGRITSFTPGTMPEAHAHWRGQLAWCPDRPVTVETGGRLHL 57

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANR 121
           + P  A+W+P    H  +     +   L+  P+A  +P       +  L  EL+ TLA  
Sbjct: 58  LSPGMAIWLPPTHRHRIRAEGARKSVSLYTRPAAAPLPKAPTPFPLEALEAELLRTLAGS 117

Query: 122 TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWA 181
           +   R EP   RL  VL+D L +         + + P++R +            +L  WA
Sbjct: 118 SRADRQEPAFARLTAVLWDRLARPAPAPTLP-LPTDPRLRRIALAHLD--GADHSLDHWA 174

Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241
              A+S R+L RL  ++TG S+  W + L+L  A+  L+ G +VQ  AH  GY + + F+
Sbjct: 175 AALALSRRSLQRLARRDTGQSWTTWMRDLRLARAIAPLMAGKSVQHAAHAAGYATASGFV 234

Query: 242 TMFKKGLGQTPGRYIARLTT 261
             F+   G TPG+   R+ +
Sbjct: 235 AAFQAAHGITPGQLQRRIES 254


>UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacterium rectale ATCC
           33656 RepID=C4ZGK8_EUBR3
          Length = 285

 Score =  150 bits (378), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 60/284 (21%), Positives = 114/284 (40%), Gaps = 30/284 (10%)

Query: 1   MMHRLNLNGYEPDRHHE-AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENAL 59
           M+  LN   +E  ++ E + V   I+A  ++   P+H H   ++I+ L G  T  + + L
Sbjct: 1   MIENLN-GIHETVKYKEYSNVKLFINAEAEDY--PIHWHTPMEIIMPLEGGYTVQIGDDL 57

Query: 60  WMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT--------MPTTCCTLKISP-- 109
             +     ++I  GV+H        +   L IE SAV+        +      + ++P  
Sbjct: 58  VHLNENDIIFIASGVKHRLIAPDTGKRLILQIEWSAVSKIKELNSILTLIAPAITLTPET 117

Query: 110 ------LCRELILTLANRTTTQR---AEPMTRRLIQVLFDELPQQPQQQLHLPVSSHP-- 158
                   R+L+L ++N   T        +  ++++VL            H  V  H   
Sbjct: 118 SGDIHSNIRKLLLDISNEYQTDSFLSEAVIYSKILEVLVLIGRHHTASSCHFNVGRHKQQ 177

Query: 159 ----KIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
               +  ++ E +     E   L + A     S+ +  RL  + T  +F ++  Q ++ +
Sbjct: 178 EYLERFLSICEYIDTHCTEDITLDEIAKIAGFSKYHFTRLFKQFTNNTFYKYLNQKRIEL 237

Query: 215 ALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           AL  L     +V + A   G+ + + FI +FK   G TP  +  
Sbjct: 238 ALTLLADPNISVTETAMQSGFANPSTFIRVFKTEKGCTPTEFRK 281


>UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=Dickeya dadantii
           Ech703 RepID=C6C3E5_DICDC
          Length = 296

 Score =  147 bits (372), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 55/285 (19%), Positives = 108/285 (37%), Gaps = 26/285 (9%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           M    L     D       A  +   + +   P+H H   +L++   G       +  + 
Sbjct: 1   MQSRGLKLQTEDYFLTEKNAVTVAERSPQSAFPLHHHDFDELVIVWRGNGLHIWNDVPYR 60

Query: 62  VPPQYAVWIPGGVEHSNQVTANAEL-CFLFIEPSAVTMPTTCCTLKIS------------ 108
           +      ++     HS +     EL   L+I P  +T+PT    L               
Sbjct: 61  ITCGDLFYVTADDRHSYESVHALELDNILYIRP-RLTLPTDWQNLLPDGGVAQQQRYWRL 119

Query: 109 -----PLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTM 163
                 + R+ + +L       +++P++ +L +VL  ++     +  H P  +       
Sbjct: 120 GEQGMAIIRDRVESLTQEC--MKSDPLSLQLSEVLLMQIALLALRYRHAPGETQLADAHQ 177

Query: 164 VEMMAKGP----VEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGL 219
           ++++         +   L  +   +  S R+L     ++TG+S  Q+ +QL+L  A++ L
Sbjct: 178 LDLLMNALRDSIAQPFRLEAFCQQYGFSLRSLRSRFKQQTGMSVSQYLRQLRLCRAMELL 237

Query: 220 V-KGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVS 263
                T+ +VA   G+D +  F  +F +  G TP  Y  R  T S
Sbjct: 238 RYDRQTISEVAAQCGFDDSNYFSVVFHQAFGVTPSSYRQRFQTRS 282


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P76241 Uncharacterized HTH-type transcriptional regulat...   305   7e-82
UniRef50_Q1ZT94 Putative transcriptional regulator n=3 Tax=Photo...   276   4e-73
UniRef50_D1RWK8 Transcriptional regulatory protein n=2 Tax=Gamma...   271   2e-71
UniRef50_C5AN13 Helix-turn-helix-domain containing protein AraC ...   269   8e-71
UniRef50_C3KCF4 Putative transcriptional regulator n=1 Tax=Pseud...   268   1e-70
UniRef50_Q0B1C2 Transcriptional regulator, AraC family n=5 Tax=P...   268   1e-70
UniRef50_Q2F9R4 AraC-type DNA-binding domain-containing protein ...   266   6e-70
UniRef50_A8G9B2 Transcriptional regulator, AraC family n=4 Tax=c...   265   1e-69
UniRef50_Q216D2 Transcriptional regulator, AraC family n=7 Tax=B...   264   3e-69
UniRef50_Q2SP75 AraC-type DNA-binding domain-containing protein ...   263   6e-69
UniRef50_Q0BZS2 Transcriptional regulator, AraC family n=1 Tax=H...   261   1e-68
UniRef50_B5RKL9 Transcriptional regulator, AraC family n=2 Tax=c...   259   6e-68
UniRef50_B6JB31 Transcriptional regulator, AraC-family n=5 Tax=P...   259   9e-68
UniRef50_A4JQ17 Transcriptional regulator, AraC family n=56 Tax=...   258   2e-67
UniRef50_Q11DK3 Transcriptional regulator, AraC family n=1 Tax=C...   256   7e-67
UniRef50_Q391T4 Transcriptional regulator, AraC family n=8 Tax=P...   256   7e-67
UniRef50_C5CZV0 Transcriptional regulator, AraC family n=1 Tax=V...   255   1e-66
UniRef50_Q4K821 Transcriptional regulator, AraC family n=22 Tax=...   253   5e-66
UniRef50_A5GBQ3 Transcriptional regulator, AraC family n=2 Tax=B...   253   5e-66
UniRef50_C3K8M6 Putative AraC-family regulatory protein n=1 Tax=...   253   6e-66
UniRef50_B8J3U2 Transcriptional regulator, AraC family n=2 Tax=P...   253   7e-66
UniRef50_D2M677 Transcriptional regulator, AraC family n=1 Tax=R...   252   1e-65
UniRef50_Q0B9P3 Transcriptional regulator, AraC family n=14 Tax=...   250   3e-65
UniRef50_Q47EU9 Transcriptional regulator, AraC family n=4 Tax=B...   250   3e-65
UniRef50_Q4K9E0 Transcriptional regulator, AraC family n=1 Tax=P...   250   3e-65
UniRef50_A6W2J3 Transcriptional regulator, AraC family n=1 Tax=M...   250   5e-65
UniRef50_Q14GY1 Transcriptional regulator araC family protein n=...   250   6e-65
UniRef50_B0VLM5 Putative transcriptional regulator (AraC family)...   249   6e-65
UniRef50_Q39GD4 Transcriptional regulator, AraC family n=7 Tax=B...   248   1e-64
UniRef50_A6W3J4 Helix-turn-helix-domain containing protein AraC ...   248   1e-64
UniRef50_D1RUP3 Transcriptional regulatory protein n=2 Tax=Enter...   248   2e-64
UniRef50_A3QGH9 Transcriptional regulator, AraC family n=1 Tax=S...   247   3e-64
UniRef50_Q7W072 Probable transcriptional regulator n=3 Tax=Borde...   246   4e-64
UniRef50_A0AX10 Transcriptional regulator, AraC family n=6 Tax=B...   246   6e-64
UniRef50_A8I0S5 Transcriptional regulator n=1 Tax=Azorhizobium c...   246   6e-64
UniRef50_B4SJK4 Transcriptional regulator, AraC family n=4 Tax=P...   246   7e-64
UniRef50_A1K8N6 Putative AraC-family transcriptional regulator n...   246   8e-64
UniRef50_Q2BLH8 Transcriptional Regulator, AraC family protein n...   245   1e-63
UniRef50_A9FA95 Transcriptional regulator, AraC family n=2 Tax=P...   245   1e-63
UniRef50_A9HXG4 Transcriptional regulator, AraC family n=3 Tax=P...   244   3e-63
UniRef50_Q47Y50 Transcriptional regulator, araC family n=1 Tax=C...   243   4e-63
UniRef50_B4SSQ8 Transcriptional regulator, AraC family n=3 Tax=S...   243   4e-63
UniRef50_Q221Z0 Transcriptional regulator, AraC family n=9 Tax=P...   242   9e-63
UniRef50_C1DH76 Transcriptional regulator, AraC-family n=3 Tax=P...   242   1e-62
UniRef50_Q13ID0 Transcriptional regulator, AraC family n=1 Tax=B...   242   1e-62
UniRef50_B0UH11 Transcriptional regulator, AraC family n=3 Tax=R...   241   3e-62
UniRef50_D1SXH7 Transcriptional regulator, AraC family n=1 Tax=A...   241   3e-62
UniRef50_Q2RRF5 Transcriptional regulator, AraC family n=2 Tax=A...   240   5e-62
UniRef50_A4WDQ0 Transcriptional regulator, AraC family n=18 Tax=...   240   5e-62
UniRef50_Q8L1B2 Transcriptional factor PhcT (Fragment) n=1 Tax=C...   239   9e-62
UniRef50_D0J513 Pyridoxamine 5'-phosphate oxidase-related protei...   239   1e-61
UniRef50_Q15UL1 Transcriptional regulator, AraC family n=3 Tax=A...   238   1e-61
UniRef50_Q4ZYQ3 Helix-turn-helix, AraC type:Arac protein, arabin...   238   2e-61
UniRef50_B3RAF2 Putative Transcriptional Regulator, AraC family ...   238   2e-61
UniRef50_D0B292 Transcriptional regulator n=40 Tax=Rhizobiales R...   237   3e-61
UniRef50_B0RW44 Transcriptional regulator, AraC family n=6 Tax=X...   237   3e-61
UniRef50_B3QB90 Transcriptional regulator, AraC family n=3 Tax=A...   237   3e-61
UniRef50_A3Y5B2 Probable transcriptional regulator n=1 Tax=Marin...   237   3e-61
UniRef50_Q11FA3 Transcriptional regulator, AraC family n=1 Tax=C...   237   4e-61
UniRef50_Q2SEK4 AraC-type DNA-binding domain-containing protein ...   236   5e-61
UniRef50_Q2K0F2 Probable transcriptional regulator protein, AraC...   236   8e-61
UniRef50_B1TGD6 Transcriptional regulator, AraC family n=7 Tax=P...   236   8e-61
UniRef50_B4EJY3 AraC family regulatory protein n=10 Tax=Burkhold...   235   9e-61
UniRef50_B4SQ42 Transcriptional regulator, AraC family n=5 Tax=X...   235   1e-60
UniRef50_Q4K6D5 Transcriptional regulator, AraC family n=8 Tax=P...   235   1e-60
UniRef50_B5WKD5 Transcriptional regulator, AraC family n=1 Tax=B...   235   1e-60
UniRef50_A4CF02 Transcriptional regulator, araC family protein n...   234   3e-60
UniRef50_D1P6X5 Transcriptional regulator, AraC family n=1 Tax=P...   234   3e-60
UniRef50_B7GW45 Bacterial regulatory helix-turn-helix protein, A...   233   7e-60
UniRef50_A9IA98 Transcriptional regulator, AraC family n=1 Tax=B...   232   9e-60
UniRef50_A6WQB9 Helix-turn-helix-domain containing protein AraC ...   232   1e-59
UniRef50_A5FCF5 Transcriptional regulator, AraC family n=1 Tax=F...   231   1e-59
UniRef50_C9PF84 Transcriptional regulator AraC family n=1 Tax=Vi...   231   2e-59
UniRef50_B6ELX6 HTH-type transcriptional regulator, AraC family ...   231   2e-59
UniRef50_A0NPK3 Probable transcriptional regulator protein, AraC...   231   2e-59
UniRef50_A3RTS8 Transcriptional regulator, AraC family n=4 Tax=R...   231   3e-59
UniRef50_Q2BIT2 Transcriptional regulator, AraC family protein n...   230   3e-59
UniRef50_C1MBM6 Transcriptional regulator n=2 Tax=Citrobacter Re...   230   3e-59
UniRef50_Q28MP8 Transcriptional regulator, AraC family n=1 Tax=J...   230   4e-59
UniRef50_B2I1A9 AraC-type DNA-binding domain-containing protein ...   230   5e-59
UniRef50_Q3JQZ2 Transcriptional regulator, AraC family n=59 Tax=...   229   7e-59
UniRef50_A9ISK4 Transcriptional regulator, AraC family n=3 Tax=P...   229   9e-59
UniRef50_A5V470 Transcriptional regulator, AraC family n=1 Tax=S...   229   1e-58
UniRef50_B1JGH9 Transcriptional regulator, AraC family n=26 Tax=...   228   1e-58
UniRef50_C4XL68 AraC family transcriptional regulator n=2 Tax=De...   228   1e-58
UniRef50_C6RQZ7 Transcriptional regulator, AraC family n=1 Tax=A...   228   2e-58
UniRef50_A7K1S8 Transcriptional regulator AraC family protein n=...   228   2e-58
UniRef50_A1TK09 Transcriptional regulator, AraC family n=4 Tax=P...   227   3e-58
UniRef50_Q5E435 Transcriptional regulator, AraC family n=3 Tax=V...   227   4e-58
UniRef50_Q7MFB7 AraC-type DNA-binding domain-containing protein ...   227   4e-58
UniRef50_Q0KFJ5 Transcriptional regulator, AraC-family n=11 Tax=...   226   4e-58
UniRef50_A3D530 Transcriptional regulator, AraC family n=12 Tax=...   226   5e-58
UniRef50_Q1ZB18 Transcriptional Regulator, AraC family protein n...   226   7e-58
UniRef50_B5EUU3 Transcriptional regulator, AraC/XylS family n=29...   226   8e-58
UniRef50_Q2KXY1 AraC-family transcriptional regulator n=5 Tax=Pr...   225   1e-57
UniRef50_C6CCZ8 Transcriptional regulator, AraC family n=3 Tax=D...   224   2e-57
UniRef50_B7UVC2 Probable transcriptional regulator n=6 Tax=Pseud...   224   2e-57
UniRef50_C7MAZ5 Transcriptional regulator containing an amidase ...   224   2e-57
UniRef50_C0YIN0 AraC/XylS family transcriptional regulator n=1 T...   224   2e-57
UniRef50_B1KGB7 Transcriptional regulator, AraC family n=2 Tax=S...   224   3e-57
UniRef50_A9ILC9 Transcriptional regulator, AraC family n=3 Tax=B...   224   3e-57
UniRef50_B2UKA3 Transcriptional regulator, AraC family n=8 Tax=B...   224   3e-57
UniRef50_B1JZJ0 Transcriptional regulator, AraC family n=2 Tax=B...   224   3e-57
UniRef50_A6V4X5 Probable transcriptional regulator n=7 Tax=Pseud...   223   4e-57
UniRef50_Q7CRR0 Transcriptional regulator, AraC family n=4 Tax=R...   223   4e-57
UniRef50_Q39NN6 Transcriptional regulator, AraC family n=9 Tax=B...   223   5e-57
UniRef50_A6V354 Transcriptional regulator, AraC family n=3 Tax=P...   223   5e-57
UniRef50_B7GXZ6 Bacterial regulatory helix-turn-helix protein, A...   223   6e-57
UniRef50_A8GH45 Transcriptional regulator, AraC family n=18 Tax=...   223   6e-57
UniRef50_Q7D3B7 Transcriptional regulator. AraC family n=2 Tax=A...   223   6e-57
UniRef50_C8Q2C9 Transcriptional regulator, AraC family n=1 Tax=P...   223   8e-57
UniRef50_C5CUS1 Transcriptional regulator, AraC family n=1 Tax=V...   222   9e-57
UniRef50_D2B3A1 AraC family transcriptional regulator n=5 Tax=Ac...   222   9e-57
UniRef50_Q7D2T6 Transcriptional regulator, AraC family n=7 Tax=P...   222   1e-56
UniRef50_Q01YV9 Transcriptional regulator, AraC family n=1 Tax=C...   221   1e-56
UniRef50_A5F0T8 Transcriptional regulator, AraC/XylS family n=40...   221   2e-56
UniRef50_C9NXQ1 Transcriptional regulator AraC family n=1 Tax=Vi...   221   2e-56
UniRef50_Q4KJ22 Transcriptional regulator, AraC family n=7 Tax=P...   221   2e-56
UniRef50_Q2BQ21 Transcriptional regulator, AraC family protein n...   221   2e-56
UniRef50_UPI00019092C6 AraC family transcriptional regulator n=1...   221   3e-56
UniRef50_D1X8C9 Transcriptional regulator, AraC family n=2 Tax=S...   221   3e-56
UniRef50_D0J7G0 Transcriptional regulator, AraC family n=11 Tax=...   220   4e-56
UniRef50_C3JKZ1 Transcriptional regulator, AraC family n=2 Tax=R...   220   5e-56
UniRef50_D1XHM7 Transcriptional regulator, AraC family n=1 Tax=S...   219   9e-56
UniRef50_B9JII8 Transcriptional regulator protein n=1 Tax=Agroba...   218   2e-55
UniRef50_A8AKK6 Putative uncharacterized protein n=1 Tax=Citroba...   218   2e-55
UniRef50_Q47UH5 Substrate-binding transcriptional regulator, Ara...   218   2e-55
UniRef50_A8GAI3 Transcriptional regulator, AraC family n=2 Tax=S...   218   2e-55
UniRef50_B9R0N9 Transcriptional regulator, AraC family protein n...   217   3e-55
UniRef50_C7JHN7 Transcriptional regulator AraC n=8 Tax=Acetobact...   217   3e-55
UniRef50_C8QEY4 Transcriptional regulator, AraC family n=1 Tax=P...   217   3e-55
UniRef50_Q0TI30 Transcriptional regulator, AraC family n=14 Tax=...   217   4e-55
UniRef50_Q7VTI7 AraC-family regulatory protein n=3 Tax=Bordetell...   216   8e-55
UniRef50_Q7NRZ6 Probable transcriptional regulator AraC family n...   216   9e-55
UniRef50_A6VY36 Helix-turn-helix-domain containing protein AraC ...   215   1e-54
UniRef50_B3Q9E6 Transcriptional regulator, AraC family n=2 Tax=R...   215   1e-54
UniRef50_Q13M62 Transcriptional regulator, AraC family n=4 Tax=B...   215   1e-54
UniRef50_A1BBK0 Transcriptional regulator, AraC family n=2 Tax=A...   214   2e-54
UniRef50_D1VDY4 Transcriptional regulator, AraC family n=1 Tax=F...   214   3e-54
UniRef50_UPI0001B55F3C AraC family transcriptional regulator n=3...   214   3e-54
UniRef50_C4WMA6 AraC family transcriptional regulator n=1 Tax=Oc...   214   3e-54
UniRef50_C8QCP4 Transcriptional regulator, AraC family n=1 Tax=P...   213   4e-54
UniRef50_B4SMW0 Transcriptional regulator, AraC family n=3 Tax=S...   213   4e-54
UniRef50_B0T088 Transcriptional regulator, AraC family n=1 Tax=C...   213   7e-54
UniRef50_A1VPE7 Transcriptional regulator, AraC family n=2 Tax=C...   213   7e-54
UniRef50_A8T3D4 AraC-type DNA-binding domain-containing protein ...   212   8e-54
UniRef50_Q13VV8 Transcriptional regulator, AraC family n=2 Tax=P...   211   1e-53
UniRef50_B1LVX0 Transcriptional regulator, AraC family n=3 Tax=R...   211   2e-53
UniRef50_B4EHM1 AraC family regulatory protein n=5 Tax=Burkholde...   211   2e-53
UniRef50_C6DFV4 Transcriptional regulator, AraC family n=1 Tax=P...   211   2e-53
UniRef50_C9PF82 Substrate-binding transcriptional regulator AraC...   211   3e-53
UniRef50_C4WPU9 AraC family transcriptional regulator n=1 Tax=Oc...   210   3e-53
UniRef50_A8G994 Transcriptional regulator, AraC family n=12 Tax=...   210   5e-53
UniRef50_C7I316 Transcriptional regulator, AraC family n=1 Tax=T...   209   6e-53
UniRef50_C1A6S8 AraC family transcriptional regulator n=1 Tax=Ge...   209   8e-53
UniRef50_Q2L001 AraC-family transcriptional regulator n=4 Tax=Bo...   209   1e-52
UniRef50_A9BNM6 Transcriptional regulator, AraC family n=3 Tax=P...   208   1e-52
UniRef50_B5GYF3 AraC-family transcriptional regulator n=4 Tax=Ac...   208   1e-52
UniRef50_Q5FU43 Transcriptional regulator, AraC family n=1 Tax=G...   208   2e-52
UniRef50_Q8EHW8 Transcriptional regulator, AraC/XylS family n=3 ...   208   2e-52
UniRef50_C0YRY4 AraC family transcriptional regulator n=1 Tax=Ch...   208   2e-52
UniRef50_B4SKF1 Transcriptional regulator, AraC family n=2 Tax=S...   207   3e-52
UniRef50_Q5LMG8 Transcriptional regulator, AraC family n=1 Tax=R...   207   3e-52
UniRef50_Q0B8S9 Transcriptional regulator, AraC family n=1 Tax=B...   207   3e-52
UniRef50_D1UHS6 Transcriptional regulator, AraC family n=1 Tax=B...   207   4e-52
UniRef50_A9BQK3 Transcriptional regulator, AraC family n=8 Tax=B...   206   5e-52
UniRef50_D1XNW1 Transcriptional regulator, AraC family n=1 Tax=S...   206   5e-52
UniRef50_D2BBL9 Transcriptional regulator, AraC-family n=18 Tax=...   206   6e-52
UniRef50_D0L975 Helix-turn-helix-domain containing protein AraC ...   206   8e-52
UniRef50_Q3JG82 AraC family regulatory protein n=50 Tax=Proteoba...   205   1e-51
UniRef50_A0KEB0 Transcriptional regulator, AraC/XylS family n=25...   205   2e-51
UniRef50_B5XX95 Transcriptional regulator, AraC family n=7 Tax=E...   204   2e-51
UniRef50_A5U9G2 AraC-family transcriptional regulator n=12 Tax=M...   204   2e-51
UniRef50_A5FK83 Transcriptional regulator, AraC family n=3 Tax=B...   204   2e-51
UniRef50_A0KTL0 Transcriptional regulator, AraC family n=25 Tax=...   204   2e-51
UniRef50_Q1ZV01 Transcriptional regulator, AraC family protein n...   204   4e-51
UniRef50_A8L2S5 Transcriptional regulator, AraC family n=3 Tax=A...   203   4e-51
UniRef50_D1BGA1 DNA-binding domain-containing protein, AraC-type...   203   5e-51
UniRef50_B9TN09 HTH-type transcriptional repressor of iron prote...   203   6e-51
UniRef50_D1XRU9 Transcriptional regulator, AraC family n=4 Tax=A...   202   1e-50
UniRef50_C3JM12 Transcriptional regulator, AraC family n=2 Tax=R...   202   1e-50
UniRef50_A0KHN7 Transcriptional regulator, AraC family n=1 Tax=A...   201   2e-50
UniRef50_B4SPX2 AraC protein arabinose-binding/dimerisation n=2 ...   201   2e-50
UniRef50_C3X452 Putative uncharacterized protein n=2 Tax=Oxaloba...   200   4e-50
UniRef50_C9PG34 Transcriptional regulator AraC family n=1 Tax=Vi...   200   4e-50
UniRef50_D1WVC3 Transcriptional regulator, AraC family n=3 Tax=A...   200   4e-50
UniRef50_A0R133 Transcriptional regulator, AraC family protein n...   199   7e-50
UniRef50_Q13JN4 Transcriptional regulator, AraC family n=13 Tax=...   199   1e-49
UniRef50_D1BCS3 DNA-binding domain-containing protein, AraC-type...   199   1e-49
UniRef50_C3JND7 Transcriptional regulator, AraC family n=2 Tax=R...   197   4e-49
UniRef50_C3JWU5 Transcriptional regulator, AraC family n=4 Tax=R...   196   5e-49
UniRef50_Q212B5 Transcriptional regulator, AraC family n=1 Tax=R...   196   5e-49
UniRef50_C0YKZ5 AraC family transcriptional regulator n=1 Tax=Ch...   196   5e-49
UniRef50_B0TZR0 Transcriptional regulator, AraC family n=1 Tax=F...   196   6e-49
UniRef50_Q28KW4 Transcriptional regulator, AraC family n=1 Tax=J...   195   1e-48
UniRef50_C8QA12 Transcriptional regulator, AraC family n=1 Tax=P...   195   1e-48
UniRef50_B5I4G1 AraC-family transcriptional regulator n=1 Tax=St...   194   2e-48
UniRef50_A8L421 Transcriptional regulator, AraC family n=12 Tax=...   194   3e-48
UniRef50_B9K583 Transcriptional regulator n=3 Tax=Alphaproteobac...   193   4e-48
UniRef50_A6SYJ9 Transcriptional regulator, AraC family n=2 Tax=O...   193   5e-48
UniRef50_D0J7V7 Transcriptional regulator, AraC family n=6 Tax=P...   193   6e-48
UniRef50_C3JLV5 AraC-family transcriptional regulator n=2 Tax=Rh...   191   2e-47
UniRef50_C3JVD6 Transcriptional regulator, AraC family n=3 Tax=R...   191   2e-47
UniRef50_D1BBW6 DNA-binding domain-containing protein, AraC-type...   191   2e-47
UniRef50_C0YJ90 AraC family transcriptional regulator n=1 Tax=Ch...   190   3e-47
UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacte...   190   4e-47
UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte...   189   9e-47
UniRef50_D1BHF8 DNA-binding domain-containing protein, AraC-type...   189   1e-46
UniRef50_A6ED21 Transcriptional regulator, AraC family protein n...   188   1e-46
UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1...   188   2e-46
UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostri...   188   2e-46
UniRef50_A8LCQ9 Transcriptional regulator, AraC family n=1 Tax=F...   187   4e-46
UniRef50_Q7NRR7 Probable transcriptional regulator n=1 Tax=Chrom...   187   4e-46
UniRef50_UPI000050FCF9 AraC family transcriptional regulator n=1...   187   4e-46
UniRef50_A5VF29 Transcriptional regulator, AraC family n=2 Tax=A...   186   5e-46
UniRef50_Q2NTH9 Putative transcriptional regulator n=1 Tax=Sodal...   186   6e-46
UniRef50_C7PA31 Transcriptional regulator, AraC family n=1 Tax=C...   186   7e-46
UniRef50_Q7UTW3 Transcription regulator n=1 Tax=Rhodopirellula b...   186   9e-46
UniRef50_A8U313 Helix-turn-helix, AraC type:Arac protein, arabin...   185   2e-45
UniRef50_Q5WI14 AraC/XylS family transcriptional regulator n=1 T...   184   3e-45
UniRef50_Q28SV1 Transcriptional regulator, AraC family n=1 Tax=J...   183   4e-45
UniRef50_A5EPW3 Transcriptional regulator, AraC family n=3 Tax=B...   183   4e-45
UniRef50_A3XQJ9 Probable transcription regulator protein n=1 Tax...   183   6e-45
UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=D...   183   7e-45
UniRef50_Q091X7 Helix-turn-helix, AraC type n=1 Tax=Stigmatella ...   182   8e-45
UniRef50_C2FVA1 AraC family transcriptional regulator n=1 Tax=Sp...   182   1e-44
UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri...   181   2e-44
UniRef50_B5CUH6 Putative uncharacterized protein n=1 Tax=Bactero...   181   2e-44
UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminoc...   181   3e-44
UniRef50_B0MGZ5 Putative uncharacterized protein n=1 Tax=Anaeros...   180   4e-44
UniRef50_D1BFL9 DNA-binding domain-containing protein, AraC-type...   180   4e-44
UniRef50_UPI000197B237 hypothetical protein BACCOPRO_02201 n=1 T...   180   5e-44
UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P...   180   5e-44
UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=R...   180   5e-44
UniRef50_D1VIF5 Transcriptional regulator, AraC family n=1 Tax=F...   179   6e-44
UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus R...   179   7e-44
UniRef50_C5PU57 AraC family transcriptional regulator n=1 Tax=Sp...   179   7e-44
UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium R...   179   9e-44
UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=C...   179   9e-44
UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=P...   179   9e-44
UniRef50_A9GKK5 Transcriptional regulator, AraC family n=1 Tax=S...   179   1e-43
UniRef50_D0LZ72 Transcriptional regulator, AraC family n=1 Tax=H...   178   1e-43
UniRef50_Q2S7S2 AraC-type DNA-binding domain-containing protein ...   178   2e-43
UniRef50_C5PVX4 AraC family transcriptional regulator n=2 Tax=Sp...   177   3e-43
UniRef50_Q84HW2 Transcription regulator n=1 Tax=Rhizobium sp. TA...   177   3e-43
UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=D...   177   3e-43
UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan...   177   4e-43
UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Pa...   177   4e-43
UniRef50_C7PGY2 Transcriptional regulator, AraC family n=1 Tax=C...   177   4e-43
UniRef50_A6GAR4 Putative transcriptional regulator n=1 Tax=Plesi...   176   5e-43

Sequences not found previously or not previously below threshold:

>UniRef50_P76241 Uncharacterized HTH-type transcriptional regulator yeaM n=55
           Tax=Enterobacteriaceae RepID=YEAM_ECOLI
          Length = 273

 Score =  305 bits (783), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 273/273 (100%), Positives = 273/273 (100%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW
Sbjct: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120
           MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN
Sbjct: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120

Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180
           RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW
Sbjct: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180

Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240
           AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF
Sbjct: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240

Query: 241 ITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ 273
           ITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ
Sbjct: 241 ITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ 273


>UniRef50_Q1ZT94 Putative transcriptional regulator n=3 Tax=Photobacterium
           RepID=Q1ZT94_PHOAS
          Length = 266

 Score =  276 bits (708), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 107/263 (40%), Positives = 154/263 (58%), Gaps = 4/263 (1%)

Query: 1   MMHRLNLN----GYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVE 56
           M   + LN     ++ D + + AVA        +   P H HRKGQL+L L G + C + 
Sbjct: 1   MTKNITLNKTIPSFDSDSYSQKAVAMRFSRSDVDEELPFHTHRKGQLVLPLSGCVRCKIA 60

Query: 57  NALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELIL 116
           NA+WMVP   AVWIP  V HS  ++ + ++C LFIEP  + +P   CTL +SPL RELI+
Sbjct: 61  NAIWMVPTNCAVWIPSQVPHSLTISDDIDICNLFIEPDVIGLPEKACTLSVSPLLRELIV 120

Query: 117 TLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGA 176
            LA        E  T RL+ VL  EL   P +Q   P+   P+++ +   +   P +   
Sbjct: 121 KLAELDQFYEDEGNTARLVDVLIYELSTMPSEQFDFPIPEEPRLQKIALALIANPSDRST 180

Query: 177 LGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDS 236
           +G+WA  +AMSER LARL+ +E GL+F  WR QL +++ALQ L  G+ VQ+++  LGY+S
Sbjct: 181 VGEWASKYAMSERTLARLVKQELGLTFGNWRGQLHIVIALQKLSSGEPVQRISEDLGYES 240

Query: 237 TTAFITMFKKGLGQTPGRYIARL 259
            +AFIT FK+ LG+ P +YI + 
Sbjct: 241 VSAFITFFKRTLGRPPKQYIKKR 263


>UniRef50_D1RWK8 Transcriptional regulatory protein n=2 Tax=Gammaproteobacteria
           RepID=D1RWK8_SEROD
          Length = 284

 Score =  271 bits (693), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 105/270 (38%), Positives = 153/270 (56%), Gaps = 1/270 (0%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           +M  +    ++ D+   A  A      + +     H+HRK QLI  + G I C  EN LW
Sbjct: 12  LMPVITEPRFDIDQVPRAIFAVQGSTISSDWEMAPHRHRKAQLIYTVRGMIRCEAENGLW 71

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA 119
           +VPPQ A+W+PG V H+ Q   + E   LF++  A+  +PT CCTL +SPL REL+L  +
Sbjct: 72  LVPPQCALWMPGNVLHNAQGAGDTECYCLFVDQDAIAGLPTHCCTLAVSPLLRELLLQAS 131

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
                   +    RL  VL D++   P + LHLPVS   +IR + E +   P +   L Q
Sbjct: 132 GFDPLYDEQGPEGRLTTVLLDQVVNAPIENLHLPVSQDARIRQLTERLLANPADKATLNQ 191

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
           WA    MSER+L R + ++ G+SF  WR+QL +++ALQ L KGD+VQKVA  LGY+S + 
Sbjct: 192 WAQRIGMSERSLNRTLQQQMGMSFGHWRRQLHVMLALQRLTKGDSVQKVALDLGYESASG 251

Query: 240 FITMFKKGLGQTPGRYIARLTTVSPQSAKP 269
           F+TMF+K +G+ P RY+A  +     +   
Sbjct: 252 FVTMFRKAVGKPPARYLAERSAAGQAAGSG 281


>UniRef50_C5AN13 Helix-turn-helix-domain containing protein AraC type n=15
           Tax=cellular organisms RepID=C5AN13_BURGB
          Length = 283

 Score =  269 bits (688), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 101/258 (39%), Positives = 154/258 (59%), Gaps = 1/258 (0%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
           + D      VA      T +     H+HR+ QL+ ++ G + C +E+ +W+VPPQ AVWI
Sbjct: 14  DVDNVPRPVVALSAMTVTKDWEHAKHRHRRAQLLYSVRGILNCEIEDGVWIVPPQCAVWI 73

Query: 71  PGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129
           PG + H+ + +   E   LF+EP A   +P +CCT+ +SPL REL+L +A          
Sbjct: 74  PGDLPHAARGSGETECHCLFVEPDAAPDLPKSCCTISVSPLLRELLLKVACFPELYPLGS 133

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
              RLI VL DEL   P + LHLP+   P++R + EM+   P +  + G WA    MSER
Sbjct: 134 REDRLIAVLLDELAMAPVEDLHLPMPRDPRLRRLAEMLLTDPTDKTSKGDWATRIGMSER 193

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
           +++RL++ E G+SF +W +QL +I+ALQ L KG++VQ VA  LGY++ + F+TMF+K +G
Sbjct: 194 SMSRLLMHEIGMSFGRWCRQLHVILALQRLTKGESVQTVALELGYENASGFVTMFRKAVG 253

Query: 250 QTPGRYIARLTTVSPQSA 267
           + P RY+A     +  +A
Sbjct: 254 KPPARYLADRMVNARSAA 271


>UniRef50_C3KCF4 Putative transcriptional regulator n=1 Tax=Pseudomonas fluorescens
           SBW25 RepID=C3KCF4_PSEFS
          Length = 257

 Score =  268 bits (687), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 76/258 (29%), Positives = 124/258 (48%), Gaps = 2/258 (0%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           M+  LN    E +    A ++       +    P H H K QL+ A+ G +        W
Sbjct: 1   MIKPLNEFLQEINEGAWAVISSATDY-PENWVIPDHSHEKHQLLYAIEGVMVVYSALNQW 59

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA 119
            VPP   +W+P G  HS +     ++  +F+ P     MP    T+ ISPL  ELI    
Sbjct: 60  TVPPNRGIWMPSGQVHSLRCVGTLKMRSVFVRPDRFPNMPGEPKTVSISPLLSELIKASV 119

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
           +       +    R++ ++ DEL   P   L LP  + P+I+ +   +   P +   +  
Sbjct: 120 SLKPPYAEDSREARIMHLILDELAILPALPLALPQPADPRIKQICLALQDDPGDASTVAD 179

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
           W+    + +  + RL  K TG++F QWRQQ +L++AL+ +  G+ V  +A  LGY+S +A
Sbjct: 180 WSARLNLDQTTIQRLFRKATGMTFGQWRQQARLLLALERIAVGEKVIDIALELGYESPSA 239

Query: 240 FITMFKKGLGQTPGRYIA 257
           F +MFKK  G+TP ++  
Sbjct: 240 FTSMFKKQFGKTPSQFFR 257


>UniRef50_Q0B1C2 Transcriptional regulator, AraC family n=5 Tax=Proteobacteria
           RepID=Q0B1C2_BURCM
          Length = 273

 Score =  268 bits (687), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 98/262 (37%), Positives = 152/262 (58%)

Query: 4   RLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63
           ++N   ++PD      ++  +     E   P+H HRKGQ+++AL G++ C   +  W+VP
Sbjct: 12  KINYQPFDPDSVDLPVISVLLETSGKEDELPMHVHRKGQMVVALSGSVMCRSPSGWWIVP 71

Query: 64  PQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTT 123
           P  AVWIPGG+ HSN  +  A+L  +FI P    +PT C +  I+PL RELI +LA    
Sbjct: 72  PNGAVWIPGGIPHSNHASDFAKLYVIFIPPDEAGLPTDCRSFTITPLIRELIRSLARFPP 131

Query: 124 TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183
               +    RL +VL D+L       + LP+S +P+++ +   +   P +   + +W   
Sbjct: 132 DYPKDGPVGRLARVLLDQLALLAPDDVFLPISDNPRLQQIASALLDNPADRSTIAEWGRR 191

Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITM 243
           +AMSER LARL+  ETG++F +WR++L +I+ALQ L  G +V  VA  LGY+   +FITM
Sbjct: 192 YAMSERTLARLVRSETGMTFGRWRERLHIIIALQRLSAGASVHAVALELGYEGPNSFITM 251

Query: 244 FKKGLGQTPGRYIARLTTVSPQ 265
           FKK +GQ+PG++       S +
Sbjct: 252 FKKTMGQSPGKFRVDNKEASSR 273


>UniRef50_Q2F9R4 AraC-type DNA-binding domain-containing protein n=2
           Tax=Vibrionaceae RepID=Q2F9R4_9VIBR
          Length = 265

 Score =  266 bits (680), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 81/257 (31%), Positives = 130/257 (50%), Gaps = 2/257 (0%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           M   +     + + +   AV    H   +      H HR  QL+ A  G +    E+ LW
Sbjct: 8   MSQNVKAISLDANINCLEAVVIPKHY-ANGHVIDWHCHRHNQLVYASSGVMAVETESKLW 66

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA 119
           +VPPQ AVWIP    H   +  +A +  +++ PS  T +P     L +SP+ RE+I+ L+
Sbjct: 67  IVPPQRAVWIPAHESHKIHMYGDAAMKNVYLLPSIDTELPNQSDVLNVSPMLREMIIHLS 126

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
            +   Q +     R++QVL D+L   PQ  + +P+ +  K+  +   +   P +  +L Q
Sbjct: 127 EQPVVQASTDSYWRIVQVLLDQLKVAPQASIQVPLPNDAKLGLVCNSLLDKPADNRSLKQ 186

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
           WA    +S R L+RL   E G+SF ++RQQ++L  +L  L +   V  VA   G+ S +A
Sbjct: 187 WAEEINVSSRTLSRLFRNEVGMSFIEYRQQVRLFHSLTLLAQTHPVTTVALECGFTSVSA 246

Query: 240 FITMFKKGLGQTPGRYI 256
           F  +FK+  G TPGR+ 
Sbjct: 247 FNHLFKQSFGVTPGRFF 263


>UniRef50_A8G9B2 Transcriptional regulator, AraC family n=4 Tax=cellular organisms
           RepID=A8G9B2_SERP5
          Length = 284

 Score =  265 bits (678), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 104/270 (38%), Positives = 153/270 (56%), Gaps = 1/270 (0%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           +M  +    ++ D+   A  A        +     H+HRK QLI  + G I C VEN LW
Sbjct: 12  LMTFITEPRFDIDQVPRAIFAVQGSTIDKDWEITHHRHRKAQLIYTVRGMIRCEVENGLW 71

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA 119
           +VPPQ A+W+P  V H+ Q  + +E   LF++  A+  +PT CCTL +SPL REL+   +
Sbjct: 72  LVPPQCALWMPSNVLHNAQGASASECYCLFVDQDAIAGLPTHCCTLAVSPLLRELLFQAS 131

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
                   +    RL  VL D+L + P + LHLPVS+  +IR + E +   P +   LGQ
Sbjct: 132 AFEQLYDQQGPEGRLAGVLLDQLVKAPVENLHLPVSNDARIRQLTERLLANPADKATLGQ 191

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
           WA    MSER+L R + ++ G+SF  WR+QL +++ALQ L +GD+VQ+VA  LGY+S + 
Sbjct: 192 WAQRIGMSERSLNRTLQQQMGMSFGHWRRQLHVVLALQRLTQGDSVQRVALDLGYESASG 251

Query: 240 FITMFKKGLGQTPGRYIARLTTVSPQSAKP 269
           F+TMF+K +G+ P RY+A            
Sbjct: 252 FVTMFRKAVGKPPARYLAEKNAADRAQGAG 281


>UniRef50_Q216D2 Transcriptional regulator, AraC family n=7 Tax=Bacteria
           RepID=Q216D2_RHOPB
          Length = 280

 Score =  264 bits (675), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 109/270 (40%), Positives = 165/270 (61%), Gaps = 2/270 (0%)

Query: 5   LNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPP 64
                 +PD      VAF +      L    H+HRK QL+L+L G +TC  ++ LW+VPP
Sbjct: 9   DPAEWSDPDDIPRPVVAFGVTLAGPGLELAPHRHRKAQLLLSLRGVLTCEAQSGLWLVPP 68

Query: 65  QYAVWIPGGVEHSNQVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTT 123
           Q+A+WIPGG  H+ + T   E   +F+EP+  + MP +CCT+ ++PL REL++  A    
Sbjct: 69  QHAIWIPGGALHAIRATGTIEGYDIFVEPALTLGMPASCCTMSVTPLLRELLVRAAGFPL 128

Query: 124 TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183
                     L  +L DE+     Q+L+LP+ +  ++R +VE+M   P + G +  WA  
Sbjct: 129 LYPEGGAESHLFTLLLDEVATASVQRLYLPMPADVRLRRIVELMMADPTDRGTMASWAKR 188

Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITM 243
             +SER LARL+ +ETG+SF +WRQQL +++ALQ + +G  +Q++A  LGY+S  +F+TM
Sbjct: 189 AGLSERTLARLLARETGMSFGRWRQQLTIMLALQRMAEGAPIQRLAVELGYESAASFVTM 248

Query: 244 FKKGLGQTPGRYIARLTTVSPQSAKPDPRQ 273
           F+K LG +PGRY+ARL   SP +A  DP+Q
Sbjct: 249 FRKTLGSSPGRYMARLRG-SPAAADQDPKQ 277


>UniRef50_Q2SP75 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella
           chejuensis KCTC 2396 RepID=Q2SP75_HAHCH
          Length = 275

 Score =  263 bits (672), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 3/256 (1%)

Query: 9   GYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAV 68
            Y P R     VA              H+H   QLI A  G +    +  +W++PPQ AV
Sbjct: 21  EYMPIRGERPIVA-RAREFPSGYRVTPHKHECCQLIFATSGVMELVTDEGIWLIPPQRAV 79

Query: 69  WIPGGVEHSNQVTANAELCFLFIEPSAVT--MPTTCCTLKISPLCRELILTLANRTTTQR 126
           W+P  VEH  +   +  L  ++I+P A     P    TL+ISPL RELI+      +   
Sbjct: 80  WMPPNVEHGMRARGDVSLRTMYIQPHACPVSFPQKPRTLQISPLLRELIIRAMRVPSNYD 139

Query: 127 AEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAM 186
                 R++ ++ +E+    ++ L LP +   +++ +   +   P +   L  W+     
Sbjct: 140 EGGRDGRIMSLILEEIEWSGERPLRLPATRDSRLQNLCRAILANPADPRELKDWSTVIGA 199

Query: 187 SERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKK 246
           SER L+RL   E G+S++ WRQQ+  + A+  L  GD V  +A  LGY++ +AF  MF++
Sbjct: 200 SERTLSRLFRNELGVSYQYWRQQVAALNAIPRLAAGDPVTLIAADLGYETPSAFSAMFRR 259

Query: 247 GLGQTPGRYIARLTTV 262
            +G  P  Y  R +  
Sbjct: 260 IMGVAPSLYFQRQSES 275


>UniRef50_Q0BZS2 Transcriptional regulator, AraC family n=1 Tax=Hyphomonas neptunium
           ATCC 15444 RepID=Q0BZS2_HYPNA
          Length = 260

 Score =  261 bits (669), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 70/248 (28%), Positives = 115/248 (46%), Gaps = 1/248 (0%)

Query: 8   NGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYA 67
           + ++ D      VA              H H + QL+ A  G ++   +   +++PPQ A
Sbjct: 12  STHQLDLSRRPVVALA-DEYPSGFVDTAHSHERIQLLYACSGVMSVVTDKTSFVIPPQRA 70

Query: 68  VWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRA 127
           VWIP  V+H         L  L+I+P        C  +++  L R LIL +         
Sbjct: 71  VWIPSQVQHEVSCRGPVSLRTLYIDPRYERDDPDCHIVEVGQLLRALILEVTQFEHDYDL 130

Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187
           +    +++ +L  EL   P+     P+ + P++  +   + + P +   + QWA    MS
Sbjct: 131 QGREGQIVSLLVSELLASPKVPYAAPMPTDPRLVRVCREIIEHPSDQRDIDQWADIAGMS 190

Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247
            R+  R   +ETG+    WRQQ++L+ AL  L  G +V  VA  +GYDS +AF  MF++ 
Sbjct: 191 RRSFTRAFKRETGMGVALWRQQVRLLEALSLLSTGSSVTSVAMDVGYDSASAFCAMFQRA 250

Query: 248 LGQTPGRY 255
            G +P RY
Sbjct: 251 FGVSPSRY 258


>UniRef50_B5RKL9 Transcriptional regulator, AraC family n=2 Tax=cellular organisms
           RepID=B5RKL9_KLEP3
          Length = 264

 Score =  259 bits (663), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 124/254 (48%), Positives = 169/254 (66%)

Query: 6   NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65
           +   +  D   +AA+A  + +  +      H HRKGQLIL++ GA+ C V++ALW+VPP 
Sbjct: 10  SPEEFNADDFSQAAIALHVSSSGEYAGQRPHAHRKGQLILSMRGAVRCEVDDALWLVPPG 69

Query: 66  YAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQ 125
           +AVW+PG + H  ++T NA+ CFLFIEP A  MP  CCT+ ++PL REL+L LA +  T 
Sbjct: 70  HAVWVPGEIPHRCRITKNADTCFLFIEPGAAAMPEICCTIAVTPLVRELVLYLAEQEHTY 129

Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185
             +  T RL  VL + +P  P + LHLPVS HPKIR M E +   P +   L QWA   A
Sbjct: 130 SPDSKTARLAAVLLEHIPDVPVEALHLPVSDHPKIRIMAEALFNEPDDRRTLKQWAAHLA 189

Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245
           +SER+LARLI + TG+SF +WRQQL L++AL  L +G  VQ+VA TLGYDS +AFITMF+
Sbjct: 190 ISERSLARLIKEATGMSFGRWRQQLHLMIALSHLSEGQPVQRVAGTLGYDSVSAFITMFR 249

Query: 246 KGLGQTPGRYIARL 259
           K LG++P +Y + L
Sbjct: 250 KALGKSPTQYFSSL 263


>UniRef50_B6JB31 Transcriptional regulator, AraC-family n=5 Tax=Proteobacteria
           RepID=B6JB31_OLICO
          Length = 300

 Score =  259 bits (662), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 2/260 (0%)

Query: 5   LNLNGYEPDRHH-EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63
              +    D  H    VA       D+   P+H H + QLI    G IT T  N  W+VP
Sbjct: 36  FGKSENREDYQHTSRVVAAMARDLPDKFVIPMHSHFRSQLIFGCSGVITVTTVNGTWVVP 95

Query: 64  PQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRT 122
              AVW+PGGVEH  + T + E+  ++++P A + +P  CC + +SPL RELI+      
Sbjct: 96  SLRAVWVPGGVEHEMRTTGSVEMRTIYVDPEAASHLPRECCVVAVSPLLRELIVAAVRIP 155

Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182
                     +++ ++  E+   P   L LP+    ++  + + +   P     L ++  
Sbjct: 156 NDFSDGSREEKIMSLILTEIHPDPVLPLDLPMPQDRRLLRVCQAILTDPGSNSTLAEFGQ 215

Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242
               S+R L R+   ETG +F +WRQQ +L   ++ L +G  +  +A  LGY+S +AF  
Sbjct: 216 TVGASQRTLERMFPVETGTTFSKWRQQARLQCGIRMLAEGTPISTIALDLGYESPSAFSL 275

Query: 243 MFKKGLGQTPGRYIARLTTV 262
           MF++ LG  P  Y   +   
Sbjct: 276 MFRRALGVAPSEYFETIHAR 295


>UniRef50_A4JQ17 Transcriptional regulator, AraC family n=56 Tax=Proteobacteria
           RepID=A4JQ17_BURVG
          Length = 325

 Score =  258 bits (659), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 132/257 (51%), Positives = 170/257 (66%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
           +PD     AVA C+H        PVH+H+KGQL+LALHGA+TC V  A W+VPPQ  VWI
Sbjct: 46  DPDAIDRPAVAMCMHVDEHAPEIPVHKHQKGQLVLALHGAVTCRVAGAFWIVPPQCGVWI 105

Query: 71  PGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130
           PG + HSN  T NA LC+LF EP  V +PT CCTL ISP+ RE+I+ LA           
Sbjct: 106 PGEMPHSNHATPNARLCYLFAEPGVVDLPTECCTLSISPMLREMIMHLAGAPLDYEQGGH 165

Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190
           T RL +VL  EL   P ++L+LPV+ HP+IR M + +   P +   + QWA   AMSER+
Sbjct: 166 TDRLARVLLHELTLMPVERLYLPVTDHPRIRQMADALNANPGDRSTVSQWAKRLAMSERS 225

Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250
           LARL+V ETGL+F +WRQQLQL++A++ L  G +VQ+V+  LGY+S TAFITMFKK LG 
Sbjct: 226 LARLVVSETGLTFGRWRQQLQLLVAVRELAGGASVQRVSDELGYESVTAFITMFKKALGH 285

Query: 251 TPGRYIARLTTVSPQSA 267
           +PGRY A L     ++ 
Sbjct: 286 SPGRYFAALARTQSEAG 302


>UniRef50_Q11DK3 Transcriptional regulator, AraC family n=1 Tax=Chelativorans sp.
           BNC1 RepID=Q11DK3_MESSB
          Length = 262

 Score =  256 bits (654), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 65/239 (27%), Positives = 113/239 (47%)

Query: 18  AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77
             V             P H H + QL  +L G  +   E A +++PP  A+WIP GV H 
Sbjct: 12  RPVVTLSDEYQAGYIDPFHSHERAQLSFSLSGVQSLITETATYVLPPNRAIWIPPGVRHK 71

Query: 78  NQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137
                N     ++I+P+   +P  C   ++S L R LI  +              +++++
Sbjct: 72  THCRENVRFYAVYIDPTLDNLPKECRVFEVSDLVRALIGEIMTFNFAYNEFGREGQIVRL 131

Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197
           L DE+P+ P   + +P+ +  +I  +  M+ + P +   +  WA    M  R   R+  K
Sbjct: 132 LLDEIPRMPTVDIQIPMPTDSRILRVCNMLIEQPGDAHDIDYWASVANMGRRTFTRVFKK 191

Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           +TG++   WR Q++L+ AL  L  G ++  VA+ +GY+S +AF ++F +  G  P  Y 
Sbjct: 192 QTGMALSTWRLQVRLMHALSLLHAGHSITSVAYGIGYESISAFTSVFHRSFGFPPSHYR 250


>UniRef50_Q391T4 Transcriptional regulator, AraC family n=8 Tax=Proteobacteria
           RepID=Q391T4_BURS3
          Length = 288

 Score =  256 bits (654), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 77/248 (31%), Positives = 118/248 (47%), Gaps = 3/248 (1%)

Query: 13  DRHHEAAVAFCI-HAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           D  H   +A  +  A  D      H+H + QL+    G        +LWM+PP  A+WIP
Sbjct: 36  DYQHAPGIAAVMPKAFPDGFVVAEHRHPRAQLVYTTTGIAEVIASQSLWMIPPHRALWIP 95

Query: 72  GGVEHSNQVTANAELCFLFIEPSA--VTMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129
             + H+ +     E+   +++P A     P     + +SPL RELI+  +        + 
Sbjct: 96  PDLPHAMRAHGQLEMRTAYVDPRAYRSATPEQPSLVNVSPLLRELIVRASAFPVEVNPDG 155

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
               +IQ++  E+    +Q L LP     ++  + + +   P +   L +WA     S R
Sbjct: 156 RDDLVIQLMLAEIEWSAEQPLRLPSGQDRRLARVCDAILANPADQRTLTEWADEVGASSR 215

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
            LARL   ETGLSF QWRQQ ++  A   L  G +V  VA  LGY++T+AF T+F++  G
Sbjct: 216 TLARLFTAETGLSFSQWRQQARISAARPLLASGRSVIAVAAELGYETTSAFSTVFRRFAG 275

Query: 250 QTPGRYIA 257
            TP  Y  
Sbjct: 276 MTPSAYAK 283


>UniRef50_C5CZV0 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus
           S110 RepID=C5CZV0_VARPS
          Length = 292

 Score =  255 bits (651), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 121/259 (46%), Positives = 159/259 (61%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
            HR     +E D+      A  I         P HQH +GQL + L G +TC V  ALWM
Sbjct: 34  THRQGAWTFEFDKMEARVAAVRIRTEALAEGLPAHQHPQGQLAMVLRGTVTCEVPGALWM 93

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANR 121
            P    +WIPGGV HS +V+A   +CFLF+E +A  MP TCC+L +SPL RELIL LA  
Sbjct: 94  APLHGGLWIPGGVPHSLRVSAEGNVCFLFVEDAAAAMPQTCCSLSVSPLLRELILYLAAL 153

Query: 122 TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWA 181
               + EP   RL  VL D+L + P + +HLPVS  P++R +++ + + P +     QWA
Sbjct: 154 PEGAQREPQALRLHAVLLDQLARMPTEAMHLPVSEEPRLRRLIDALMRDPADRTTAAQWA 213

Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241
              AMSER L RL+  ETG+SF +W Q+L+LI+ALQ L  G +VQ+VAH LGYDS +AFI
Sbjct: 214 SRLAMSERTLTRLVQLETGMSFGRWSQRLRLIVALQWLTSGLSVQQVAHGLGYDSVSAFI 273

Query: 242 TMFKKGLGQTPGRYIARLT 260
            MF+K +GQ P RY+AR  
Sbjct: 274 AMFRKAMGQPPARYLARRR 292


>UniRef50_Q4K821 Transcriptional regulator, AraC family n=22 Tax=Bacteria
           RepID=Q4K821_PSEF5
          Length = 274

 Score =  253 bits (647), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 81/262 (30%), Positives = 128/262 (48%), Gaps = 3/262 (1%)

Query: 6   NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65
           N++  + D+     +A       D    P H+HR+ QL+    G +  + +   W+VPPQ
Sbjct: 14  NISIDQLDQTPRPVLAIGTDY-PDGQRLPRHRHRRAQLLYGATGVMQVSTDQGNWVVPPQ 72

Query: 66  YAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTT-CCTLKISPLCRELILTLANRTTT 124
            AVWIP GVEH   +        L+IEP+A  + ++ C  + ISPL R+L+L   +    
Sbjct: 73  RAVWIPPGVEHEVLMLG-VSTRSLYIEPAAAPLDSSGCRVIGISPLLRQLLLEAVDMPLE 131

Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184
              +     LI +L  E+ + P   LH+P+ +   +  +       P    +   WA   
Sbjct: 132 YDLDGRDGLLINLLLHEIQRCPGLPLHIPLPAGGPLLELCRAFLARPDVHQSPLHWADRL 191

Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244
            +S R   R   +ET +SF QWRQ+  +I AL  L   + V ++A  LGYDS  AF TMF
Sbjct: 192 HVSLRTFNRWFRQETDMSFVQWRQRACVIQALARLAAAEPVTRIALDLGYDSPGAFSTMF 251

Query: 245 KKGLGQTPGRYIARLTTVSPQS 266
           ++ LGQ+P  Y+ +      ++
Sbjct: 252 RRVLGQSPSTYLNQEHPAPGKA 273


>UniRef50_A5GBQ3 Transcriptional regulator, AraC family n=2 Tax=Bacteria
           RepID=A5GBQ3_GEOUR
          Length = 278

 Score =  253 bits (647), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 88/223 (39%), Positives = 121/223 (54%), Gaps = 1/223 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H +GQLI A  G +       +W+VPP  AVW+P   EH      +  L  LF++PSA
Sbjct: 49  HVHPRGQLIYASSGMMRVICSRDVWVVPPSQAVWVPPNQEHEVYFPGDTALRSLFVDPSA 108

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           VT +P  C  LK++PL RELIL       +   +    R++QVL DEL       L LP+
Sbjct: 109 VTGLPLQCTVLKVAPLLRELILRAVQIGNSYAPDGAEWRVMQVLLDELRIAEATPLRLPM 168

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
           +   ++  +++ + K P +   L  W      S R LARL V ETGL+F  WR++L L  
Sbjct: 169 ARDERVMRVIDALLKSPGDNRGLDAWGKIAGASSRTLARLFVSETGLTFGGWRKRLLLHK 228

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           AL  L +G+ V  +A  LGY S +AFI MF+K LG +P RY  
Sbjct: 229 ALDRLDRGEQVTGIAFDLGYQSLSAFIEMFRKELGVSPRRYAR 271


>UniRef50_C3K8M6 Putative AraC-family regulatory protein n=1 Tax=Pseudomonas
           fluorescens SBW25 RepID=C3K8M6_PSEFS
          Length = 265

 Score =  253 bits (646), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 72/266 (27%), Positives = 124/266 (46%), Gaps = 6/266 (2%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           M      + Y+PD          +         P H HR+GQ   A  GA+    +   W
Sbjct: 1   MPPTFTFSPYKPD---SPEAVVTLREYPSGTVFPRHTHRRGQFAYASTGALKMFTDLGNW 57

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT---MPTTCCTLKISPLCRELILT 117
           +VPPQ A+W+PGGV H   +  +  +   +++ +A     +   C    +SPL R L+  
Sbjct: 58  VVPPQRAIWVPGGVSHEMHMRGDVVMLNTYLDDAAARRAGLQDYCQVFGVSPLLRHLLEA 117

Query: 118 LANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGAL 177
                 +         ++ +L DE+   P+  L  P+ S  ++    +     P +  ++
Sbjct: 118 ALAIGPSASPSVRDCCVLTLLIDEIGTMPELPLSAPLPSESRLARSCQRFLDAPTQKISI 177

Query: 178 GQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDST 237
           G+ A + +MS R   R   + TG++F  WRQQ+ L+ A   L  G ++  VA  LG+ S+
Sbjct: 178 GEMADWSSMSRRTFTRNFRECTGMTFVSWRQQVCLLEATARLSHGSSITDVAFELGFSSS 237

Query: 238 TAFITMFKKGLGQTPGRYIARLTTVS 263
           +AF ++F++ LG +P RY+A+    S
Sbjct: 238 SAFTSVFRRNLGDSPARYLAKSKAAS 263


>UniRef50_B8J3U2 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria
           RepID=B8J3U2_DESDA
          Length = 269

 Score =  253 bits (646), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 119/263 (45%), Positives = 155/263 (58%), Gaps = 1/263 (0%)

Query: 7   LNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQY 66
           L  + PD+      A  +    +E   P HQH  GQL+L L G+  C V   LW+VPPQ 
Sbjct: 7   LAAFSPDQWDIPVTARKVDVVRNEYEMPTHQHTAGQLLLTLRGSTACRVFEDLWLVPPQC 66

Query: 67  AVWIPGGVEHSNQVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQ 125
           AVW+P    H N++TA + +C LFI    + + P TCCTL ISPL RELI  +A      
Sbjct: 67  AVWVPPNTPHCNRITARSSVCLLFIRQEHIRLLPATCCTLSISPLVRELIRHVAALPPED 126

Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185
                  RLIQVL DEL + P   L LPVSS  +++++ E + + P E   L  WA    
Sbjct: 127 MLAERGERLIQVLLDELSRMPATGLRLPVSSDIRLQSIAESITEAPAERKDLSAWARHIG 186

Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245
           MS R+LARL+V+ETGLSF +WRQQL L+MA+Q L  G +VQ+ A  LGY+S TAFITMFK
Sbjct: 187 MSRRSLARLVVRETGLSFGRWRQQLLLVMAIQMLSDGISVQQTAWDLGYESVTAFITMFK 246

Query: 246 KGLGQTPGRYIARLTTVSPQSAK 268
           K LG +P +Y+ R      +S  
Sbjct: 247 KALGASPAKYVQRYFATGTESGS 269


>UniRef50_D2M677 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas
           palustris DX-1 RepID=D2M677_RHOPA
          Length = 294

 Score =  252 bits (644), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 96/240 (40%), Positives = 150/240 (62%), Gaps = 2/240 (0%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
            H+H K QL+    G I C VE+ +W+VPPQ A+WIPGG+ H+   +   E   LF+ P 
Sbjct: 37  RHRHDKAQLLYCARGVINCEVEDGVWIVPPQCAIWIPGGLPHAAFGSGEVECICLFVAPD 96

Query: 95  AVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153
           A   +P TCCT+ IS L R L++  +        +    R++ V+ DEL + P +QL LP
Sbjct: 97  AAAGLPVTCCTIAISDLLRHLLIRASELPERYDVDGPDGRIVAVILDELAKAPVEQLCLP 156

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
           + S P+++ + E++   P +   + +WAG  A+SER+L+R+++ E G+SF  WR+QL +I
Sbjct: 157 IPSDPRLKQLAELLVSSPADHATVAEWAGRVALSERSLSRMLMDEIGMSFGHWRRQLHVI 216

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI-ARLTTVSPQSAKPDPR 272
           +AL+ L  G+TVQ VA  LGY+S ++F+TMF+K +G+ P RY+  R T+V    + P P+
Sbjct: 217 LALRRLSAGETVQTVALDLGYESASSFVTMFRKMVGKPPIRYLVERQTSVPLSRSDPPPK 276


>UniRef50_Q0B9P3 Transcriptional regulator, AraC family n=14 Tax=Proteobacteria
           RepID=Q0B9P3_BURCM
          Length = 322

 Score =  250 bits (640), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 76/253 (30%), Positives = 117/253 (46%), Gaps = 3/253 (1%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
           +P  H   +V    +      T P H H +GQ   A  G I+ +  +  W+VPPQ A W+
Sbjct: 70  DPYDHIPRSVVVTANDYPAGTTFPEHAHGRGQFAFASRGTISVSTPHGRWLVPPQRACWV 129

Query: 71  PGGVEHSNQVTANAELCFLFIEPSAVT---MPTTCCTLKISPLCRELILTLANRTTTQRA 127
           P GV H   +T    +   F+   A     +P  C    +SPL R+LI            
Sbjct: 130 PPGVRHEMTMTGAVTMLNTFVSDDAARAAGLPDQCGVYGVSPLLRQLIDDAIELPAMYDV 189

Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187
           +    +L+ +L  E+   P+  LH P+ +  ++ ++   +   P     L Q A    +S
Sbjct: 190 DGRAGKLMALLVAEIATMPRLSLHAPLPADARLASICRHLFASPSIAADLDQVATHAGVS 249

Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247
            R   RL   +TG+SF  WRQQ+ ++ A+  L  G  V +VA  LGY S +AF + F++ 
Sbjct: 250 RRTFTRLFRAQTGVSFAAWRQQVCMLAAITRLSDGQPVTRVAFELGYASASAFTSAFRRI 309

Query: 248 LGQTPGRYIARLT 260
           LG TP RY+    
Sbjct: 310 LGDTPSRYLEARR 322


>UniRef50_Q47EU9 Transcriptional regulator, AraC family n=4 Tax=Bacteria
           RepID=Q47EU9_DECAR
          Length = 273

 Score =  250 bits (640), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 78/254 (30%), Positives = 116/254 (45%), Gaps = 2/254 (0%)

Query: 19  AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78
            +   +     E+  P H+H   QL   L G I  +     W+VP   AVWIP  +EH  
Sbjct: 20  PMTVNLRCPPAEVYVPPHRHDWAQLAYPLRGGIRISAAGMTWLVPALRAVWIPPHIEHDL 79

Query: 79  QVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTT-QRAEPMTRRLIQ 136
            +    E   ++I P    +P   C  +++S L R L   L+      Q      R++  
Sbjct: 80  LMLGEVEFRTVYIAPEVAPLPLDACSVIEVSDLMRALFEALSEADGDGQEPSLRQRQVTA 139

Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196
           +L  E+ + P   L LP+    +++ + + +   P    +L +WA     SER LARL V
Sbjct: 140 LLLTEIRRAPPLSLGLPMPHDRRLQALCQALIDEPASPLSLAEWAARVGASERTLARLFV 199

Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
            E  LSF  WRQQL+L  AL  + +G    +VA  LGY S  AF  MFK+  G  PGR++
Sbjct: 200 SELKLSFGAWRQQLRLARALDLIGRGRPCGEVAAELGYASPAAFSAMFKRAFGVPPGRFM 259

Query: 257 ARLTTVSPQSAKPD 270
              + +       D
Sbjct: 260 QERSPLPAGEPHND 273


>UniRef50_Q4K9E0 Transcriptional regulator, AraC family n=1 Tax=Pseudomonas
           fluorescens Pf-5 RepID=Q4K9E0_PSEF5
          Length = 271

 Score =  250 bits (640), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 105/260 (40%), Positives = 145/260 (55%), Gaps = 1/260 (0%)

Query: 4   RLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63
                  +PD       A  I         P H HRK QL+  L G ++C     LW+ P
Sbjct: 5   NEQDQPQDPDAIARPVCALRISTQEQRWERPWHSHRKAQLLFPLSGVLSCESAEGLWLAP 64

Query: 64  PQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRT 122
           PQ AVWIP   +H  Q   NA    LF+EP     +P  CCTL +SPL +EL+   A   
Sbjct: 65  PQCAVWIPSATDHRVQGLENALGYCLFVEPEHARSLPQACCTLAVSPLLQELLQRCAQLP 124

Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182
                +    RL+ V  DEL   P++Q+HLP+  H ++R +   + + P    +LGQWA 
Sbjct: 125 YLYDQQGAEGRLMAVALDELAAAPREQIHLPMPRHEQLRRLAGQILEQPERRLSLGQWAE 184

Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242
              +SER+L+RLIV ETGLSF +W++QL +++ L+ L +GD+V++VA TLGYDS +AFI 
Sbjct: 185 QIGLSERSLSRLIVAETGLSFGRWQRQLHILLGLKQLGRGDSVERVALTLGYDSASAFIR 244

Query: 243 MFKKGLGQTPGRYIARLTTV 262
           MFKK +GQ PGR+ A     
Sbjct: 245 MFKKAVGQPPGRFFAERRQA 264


>UniRef50_A6W2J3 Transcriptional regulator, AraC family n=1 Tax=Marinomonas sp.
           MWYL1 RepID=A6W2J3_MARMS
          Length = 267

 Score =  250 bits (638), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 135/266 (50%), Gaps = 5/266 (1%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDE---LTSPVHQHRKGQLILALHGAITCTVENA 58
           M ++  +    D   ++ V   +     E     + +H+H  GQL+ +L G ++   E+ 
Sbjct: 1   MAKMKKSLLLADIIDQSDVDLILSVELIENQIRETELHRHAFGQLVGSLEGLLSVQTESG 60

Query: 59  LWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILT 117
            W+VP  + VWIP    H  +         ++++P    +  ++  T + +PL +EL+  
Sbjct: 61  WWVVPATHTVWIPPNTLHGAKSHGPFRGWSVYLDPKRSQLLDSSPKTFQTTPLLKELVHR 120

Query: 118 LANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGAL 177
            A+ +    ++ +  RL +VLFDE+   P+    L     P ++ M + +     +  +L
Sbjct: 121 AASWS-DDTSQAVKSRLSEVLFDEIVNLPETLFGLLQPGLPSLKKMTDGLLSNLADNRSL 179

Query: 178 GQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDST 237
            +WA    +S R LAR   ++TGL F +WRQ+ +++ A++ L     V  +A TLGY++ 
Sbjct: 180 EEWARSIGLSSRTLARRFNEQTGLGFSEWRQRARVLSAIEMLADNVPVTNIAFTLGYENV 239

Query: 238 TAFITMFKKGLGQTPGRYIARLTTVS 263
           +AFI MF++ +G TPG+YI R    S
Sbjct: 240 SAFIAMFRRVMGVTPGQYIQRHNKES 265


>UniRef50_Q14GY1 Transcriptional regulator araC family protein n=19 Tax=Francisella
           RepID=Q14GY1_FRAT1
          Length = 282

 Score =  250 bits (638), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 71/231 (30%), Positives = 113/231 (48%), Gaps = 1/231 (0%)

Query: 31  LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLF 90
             S  H HR+G++     G +  +  N  W++P   A WIP    H  +++   E   +F
Sbjct: 43  QESDWHHHRRGKIFCIESGLVHVSTPNGSWVLPSNRAGWIPPNTSHKIRISGIVEGWVIF 102

Query: 91  IEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ 149
           I P+    +P +   + +S + R L L                 + +++ +E+   P++ 
Sbjct: 103 IHPNMCDDLPKSSRVIPMSEVLRALALRATEWDKYNNLSLEQEHIAKIICNEIRLAPEEA 162

Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209
           LHLP+    ++  +   +   P    +L QWA F AMS R L R  + ETGLSF +WRQQ
Sbjct: 163 LHLPMPKTDRVIKVANAIIDNPSISKSLEQWAAFAAMSPRTLRRAFLSETGLSFSRWRQQ 222

Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260
            QL   L  L K  +V +V+ +LGY S + FI MF+K  G+TP +Y +   
Sbjct: 223 AQLARGLDMLAKDISVTEVSDSLGYASPSNFIAMFRKAFGKTPKQYFSSER 273


>UniRef50_B0VLM5 Putative transcriptional regulator (AraC family) n=1
           Tax=Acinetobacter baumannii SDF RepID=B0VLM5_ACIBS
          Length = 275

 Score =  249 bits (637), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 4/259 (1%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           M   ++N ++    H  A     +         +HQH +GQLI A  G +  + E  LW+
Sbjct: 8   MIEKSINPHDYQHIHSPASVMPKNYHAK-HRIDLHQHERGQLIYATSGIMELSTEEELWL 66

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFIEP--SAVTMPTTCCTLKISPLCRELILTLA 119
           +PP++ VWIP    H      +  L  L+I+    +   P   C + +S L  EL++  A
Sbjct: 67  IPPRFGVWIPAYTPHQMTTKTDVHLNTLYIDTYRWSKPFPDKPCGVTVSGLLHELLIRAA 126

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVS-SHPKIRTMVEMMAKGPVEWGALG 178
           +         +  + + +L +EL       L  P      +++ +  ++   P +  +L 
Sbjct: 127 SFPIEYPLHSVEWKTMDLLVEELKWTKGISLMTPEPYMDKRLQDLCNILIINPADNHSLE 186

Query: 179 QWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTT 238
           +W+     + R L+RL  +E   +F  WRQQL+++ A+  L+ G  +  ++  LGY S +
Sbjct: 187 EWSSQVGATTRTLSRLFKQEMNTTFTLWRQQLRIVHAIPSLMAGKPISDISQELGYSSQS 246

Query: 239 AFITMFKKGLGQTPGRYIA 257
            F  MFKK +G+TP  YIA
Sbjct: 247 TFTVMFKKIMGKTPTEYIA 265


>UniRef50_Q39GD4 Transcriptional regulator, AraC family n=7 Tax=Betaproteobacteria
           RepID=Q39GD4_BURS3
          Length = 278

 Score =  248 bits (635), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 74/239 (30%), Positives = 112/239 (46%), Gaps = 1/239 (0%)

Query: 25  HAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANA 84
                      H H +GQ+     G       +  W++PP  A WIP G +H   ++   
Sbjct: 40  TYRLGTREVDWHSHLRGQVFCVESGFAHVRTPHGSWLLPPHRAGWIPPGEQHKVSISGAL 99

Query: 85  ELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELP 143
               + I P+A   MP   C + I+ L R L+    +     R +    R+  VL DE+ 
Sbjct: 100 SGWSVVIAPAASRRMPDQPCVIAITELMRALVRRAVSWADQDRLDIEQARISIVLLDEMR 159

Query: 144 QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203
           + P + LHLP+    ++  +   +   P +   L  WA +  +S R L+RL V ETG SF
Sbjct: 160 RAPHEPLHLPMPRDRRLLRIANAILGQPHDSRTLEAWAEWAGLSARTLSRLFVAETGTSF 219

Query: 204 RQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262
            QWRQQ +L  AL+ L  GD+V  +A  LGY + + FI MF++  G +P  Y A+    
Sbjct: 220 AQWRQQARLTHALERLASGDSVANIADALGYATPSNFIAMFRRAFGDSPAHYFAKRKQP 278


>UniRef50_A6W3J4 Helix-turn-helix-domain containing protein AraC type n=9
           Tax=Gammaproteobacteria RepID=A6W3J4_MARMS
          Length = 273

 Score =  248 bits (634), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 97/245 (39%), Positives = 147/245 (60%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
            D +    +     +      +P H H+KGQL+L L G +T  +++ +W+VPP+ AVWIP
Sbjct: 22  ADHYPHRVLVLRSQSVPHSEETPWHHHQKGQLVLPLTGVVTSFIDDKMWLVPPRCAVWIP 81

Query: 72  GGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131
             V H NQ++ NA++C LF++ + + +P   CTL I+P  RELIL L  +   ++ +P T
Sbjct: 82  SNVMHRNQISPNADVCMLFVDSTNLALPEITCTLTITPFVRELILHLHTQQDYEKTDPAT 141

Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191
            RL+ VL D+L Q  +++   P+   P +  +   +   P E   LG+WA  FAMSER L
Sbjct: 142 GRLVDVLLDQLIQLEREEFDFPIPDEPTLNRLALELIARPNEKRTLGEWASDFAMSERTL 201

Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251
           AR+I +   L+F QWR QL +++ALQ L     +Q ++  LGYDS +AFIT FKK LG++
Sbjct: 202 ARMIKRHVQLTFGQWRSQLHIVLALQKLAINLPIQTISEELGYDSVSAFITFFKKALGKS 261

Query: 252 PGRYI 256
           P +Y 
Sbjct: 262 PRQYR 266


>UniRef50_D1RUP3 Transcriptional regulatory protein n=2 Tax=Enterobacteriaceae
           RepID=D1RUP3_SEROD
          Length = 285

 Score =  248 bits (633), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 4/247 (1%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
           + D    + +A            P+H HR+ QL+    G +        W+VPPQ AVW+
Sbjct: 32  DIDHVPRSVIAIGTDY-PSGHLLPMHSHRRAQLLYGATGVMHVFTHQGNWIVPPQRAVWL 90

Query: 71  PGGVEHSNQVTANAELCFLFIEPSA--VTMPTTCCTLKISPLCRELILTLANRTTTQRAE 128
           P  + H  ++        L+IEP+A   + P  C  + ++PL R+L++   +       +
Sbjct: 91  PPQMPHEVRMVG-VTTRSLYIEPTALLASQPQVCQVVSVTPLMRQLLMAAVDMPLEYDPD 149

Query: 129 PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSE 188
                L+ +L  EL Q     LH+P+ +  ++  + ++    P    +  +WA    MS 
Sbjct: 150 GRDGALVFLLLHELAQLQSLPLHIPLPADRRLGELCQLFLLQPNAHDSPQEWATRLYMSI 209

Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGL 248
           R  +R    +TG+SF QWRQ+  +++AL  L +G++V +VA  LGY+S+ AF TMF++ L
Sbjct: 210 RTFSRFFRAQTGMSFSQWRQRACVVLALAQLTEGNSVTQVALELGYESSAAFATMFRRVL 269

Query: 249 GQTPGRY 255
           GQ P  Y
Sbjct: 270 GQAPSCY 276


>UniRef50_A3QGH9 Transcriptional regulator, AraC family n=1 Tax=Shewanella loihica
           PV-4 RepID=A3QGH9_SHELP
          Length = 262

 Score =  247 bits (631), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 2/261 (0%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           MMHR  +                    +D      H H   QLI A  G +  + E + W
Sbjct: 1   MMHRQEIEHIPVFGSPSQLFKPVAREYSDGQLLAPHWHHAAQLIYAESGVMELSCEESFW 60

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT--MPTTCCTLKISPLCRELILTL 118
           ++ PQ A+W+P  + H  +      L  ++ +P A+         +L +SPL REL+ + 
Sbjct: 61  IISPQQALWMPAELPHRLKARGQVSLRSVYFQPDALPERFSKQPQSLVVSPLLRELMKSA 120

Query: 119 ANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALG 178
              T++ +       L+Q+L  E+    +  L LP+    +++ +   +   P     L 
Sbjct: 121 MPVTSSSQPSSREVHLMQLLMSEIGWAQEIPLKLPMPKDNRLQKICLGLLADPGNDCTLS 180

Query: 179 QWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTT 238
           QW      S R L+RL   + G SF  WRQQ ++  A+  L  G+ + +VA  +GYDS  
Sbjct: 181 QWGEIVGASPRTLSRLFQTQLGTSFAIWRQQARIFAAIPRLNLGEPIVRVAMEMGYDSAG 240

Query: 239 AFITMFKKGLGQTPGRYIARL 259
           AF + FKK +G TP  +  ++
Sbjct: 241 AFASAFKKMMGVTPSEFRTQV 261


>UniRef50_Q7W072 Probable transcriptional regulator n=3 Tax=Bordetella
           RepID=Q7W072_BORPE
          Length = 286

 Score =  246 bits (630), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 74/248 (29%), Positives = 123/248 (49%), Gaps = 2/248 (0%)

Query: 20  VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79
           +A           S +H+H +GQL+ A+ G +T   +   W+V P  A+WI  GV H  +
Sbjct: 39  MAALATDYPAGTVSSLHRHDRGQLLYAMSGVVTVITDLGSWVVAPGQALWIAPGVLHQTR 98

Query: 80  VTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL 138
              +  +  L+I+P+    +P  C T+++SPL + LIL                 +  ++
Sbjct: 99  GFESVAIRSLYIDPAHADGLPAACQTIQVSPLLQALILEAVKLPPQDAGSERAGHIRALI 158

Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198
            DE+       L++P+    ++  + + + + P   G+L  WA +  +S RNL RL   +
Sbjct: 159 LDEMRHVCAAPLYVPMPRDARLARICQALLRDPANAGSLDAWAAYGGLSRRNLTRLFRAQ 218

Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           TG SF  WRQ++ L+ AL  L +G+ +  VA  LGY S  AF  MF++ LG +P  Y  R
Sbjct: 219 TGASFNAWRQKVLLMEALARLSRGEQITAVALDLGYGSPGAFTAMFRRALGVSPREYF-R 277

Query: 259 LTTVSPQS 266
            T    ++
Sbjct: 278 WTEAPQRA 285


>UniRef50_A0AX10 Transcriptional regulator, AraC family n=6 Tax=Burkholderia
           RepID=A0AX10_BURCH
          Length = 277

 Score =  246 bits (629), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 74/241 (30%), Positives = 120/241 (49%), Gaps = 1/241 (0%)

Query: 20  VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79
           +A         +  P H HR+GQLI A+ G +    +   W+VP   AVW+PGG +H  +
Sbjct: 37  IAVVASDSPAGMAYPPHSHRQGQLIHAISGVMIVHADAGSWVVPTGRAVWVPGGTQHEIR 96

Query: 80  VTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL 138
              + ++  +F+ P    ++PT C  +++  L RELI+T  +            R++ ++
Sbjct: 97  SAGDVQMRTVFVGPEVRPSLPTECRVIEVGTLLRELIVTACDLPADYDLSHRAGRVLALI 156

Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198
            DE+   P   LH+P+  HP +  +   +   P     L  WA    M+ER LAR   +E
Sbjct: 157 LDEIEIAPSLSLHVPMPRHPALVALCTRLINDPSSVVTLQAWARDAHMNERTLARAFKRE 216

Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           TG++   W +  +L+++L  L  G  + ++A   GYDS +AF  MF+K LG  P  Y  R
Sbjct: 217 TGMTHGAWCRHARLLLSLPRLAAGTPILELALEHGYDSPSAFAAMFRKALGVAPSEYFRR 276

Query: 259 L 259
            
Sbjct: 277 R 277


>UniRef50_A8I0S5 Transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571
           RepID=A8I0S5_AZOC5
          Length = 272

 Score =  246 bits (629), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 95/245 (38%), Positives = 145/245 (59%), Gaps = 2/245 (0%)

Query: 13  DRHHEAAVAFCIHAGTDELT-SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           D    A V     A  + L  SP H H+K QL+  + G I C VE+A+W+VPPQ AVWIP
Sbjct: 14  DEVPRALVTANAVASLESLEQSPRHHHQKAQLLFTVRGVINCEVEDAVWIVPPQCAVWIP 73

Query: 72  GGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130
           GGV H+   +   E   LFIEP A   +P  CCT+ +S L R L++           +  
Sbjct: 74  GGVPHTVFGSGEVECISLFIEPPATPELPNACCTITVSSLLRHLLMRANELPELYDVDGP 133

Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190
             R++ V+FDEL   P + L LP+    +++ + +++   P +   + +WA   A+SER+
Sbjct: 134 DGRIVSVIFDELAAAPVEDLRLPIPGDVRLKKLTDLLIAAPADHATVAEWASRIALSERS 193

Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250
           L R++ ++ G+SF +WR+QL +++AL+ L  G TVQ VA  LGY+S ++F+TMF+K +G+
Sbjct: 194 LNRMLAEQVGMSFGRWRRQLHVVLALRRLSAGQTVQAVAMDLGYESASSFVTMFRKMVGK 253

Query: 251 TPGRY 255
            P RY
Sbjct: 254 PPSRY 258


>UniRef50_B4SJK4 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria
           RepID=B4SJK4_STRM5
          Length = 282

 Score =  246 bits (628), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 103/268 (38%), Positives = 138/268 (51%), Gaps = 1/268 (0%)

Query: 6   NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65
            +    PDR     +   +    D    P H HRK QL++A  G I       LW+VPPQ
Sbjct: 10  EVGPDYPDRVDLPVMVLGLDPIPDAWQMPFHAHRKAQLLVATRGLIMLETAAGLWVVPPQ 69

Query: 66  YAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTT 124
            A+WIPGG+ H    +       +F+EP  V  +PT C  + I+P  + L+   +     
Sbjct: 70  GAIWIPGGLSHRASSSGRPHGFVVFVEPGVVPGLPTHCAAMAITPFMQALLERASALPGH 129

Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184
                   RL+ V  DEL   P + LHLP+ S  ++R +   M   P E   L  WA   
Sbjct: 130 YEPGSAQDRLMAVFLDELIAAPPEWLHLPMPSDARLRRLANAMLDTPAERATLEVWASRI 189

Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244
            MSERN++RL   ETGLS R+WR+QL +++AL  L KG TVQ VA  LGYDS  AF+TMF
Sbjct: 190 GMSERNMSRLFSGETGLSVRRWRRQLHVVVALPLLAKGRTVQAVADHLGYDSAGAFVTMF 249

Query: 245 KKGLGQTPGRYIARLTTVSPQSAKPDPR 272
           +K +G  P R++A   T  P S   D R
Sbjct: 250 RKTVGAPPKRFLAERGTRQPVSDADDQR 277


>UniRef50_A1K8N6 Putative AraC-family transcriptional regulator n=1 Tax=Azoarcus sp.
           BH72 RepID=A1K8N6_AZOSB
          Length = 261

 Score =  246 bits (628), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 75/246 (30%), Positives = 114/246 (46%), Gaps = 4/246 (1%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
            P    +  ++  +     +   P H H  GQL   + GA+   V  + W+VPP  A+W+
Sbjct: 11  RPQPTTQDPISVLVREPPPDSIIPWHSHPWGQLAYPVSGAVCMDVPGSRWLVPPFRALWV 70

Query: 71  PGGVEHSNQVTANAELCFLFIEPSAVTMPT-TCCTLKISPLCRELILTLANRTTTQRAEP 129
           P GVEH   +  +  L  + +      +P   C  L+I+PL RELI  L  R        
Sbjct: 71  PPGVEHQQSMLGHVRLRVVHVAEGCAALPESHCAVLEITPLLRELIEALLPRPP---QSE 127

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
              ++  +L  EL Q     L LP  S  ++  + E +   P +   L +WA     S R
Sbjct: 128 RRTQIQALLLTELSQARTLNLRLPQPSDRRLAALCEALMADPADNAPLTEWARRVGASGR 187

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
            LARL   E G+SF  WRQQ++L  A   + +G    ++A  LGY S +AF  MF++  G
Sbjct: 188 TLARLFQSEMGMSFGLWRQQVRLTHATVLVAQGRPYAEIAAELGYASPSAFSAMFRRAFG 247

Query: 250 QTPGRY 255
            +P  +
Sbjct: 248 CSPRAF 253


>UniRef50_Q2BLH8 Transcriptional Regulator, AraC family protein n=1
           Tax=Neptuniibacter caesariensis RepID=Q2BLH8_9GAMM
          Length = 260

 Score =  245 bits (626), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 85/230 (36%), Positives = 127/230 (55%), Gaps = 1/230 (0%)

Query: 32  TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91
               H+H +GQL  A  G I    +  +W+VPP  AVW+PG V H      +AEL  LF+
Sbjct: 31  DMDPHRHPRGQLAYAAEGIIRVYTDEGVWVVPPSQAVWVPGDVVHRTTAEVSAELRHLFV 90

Query: 92  EPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL 150
           +P+    +   C  +++SPL RELI+ +A+            RL  V+ DEL       L
Sbjct: 91  DPAYLSGLSDQCSVVEVSPLLRELIMRVADFGDDYSTNSPASRLCAVILDELQNLKPSLL 150

Query: 151 HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQL 210
           HLP ++  +++ ++  M + P     L  WA     SER ++RL VKETG++F+QWR+QL
Sbjct: 151 HLPGATDRRLQRVMHAMVENPSAEIGLNYWAEQVGASERTISRLFVKETGMNFQQWRKQL 210

Query: 211 QLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260
            L  A+  L K + V  +A  LGY S +AF+ MF++ LG+ PG+Y   L+
Sbjct: 211 LLQEAVDRLGKRNAVVDIALELGYRSPSAFVAMFRQALGKPPGQYFKDLS 260


>UniRef50_A9FA95 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria
           RepID=A9FA95_SORC5
          Length = 277

 Score =  245 bits (626), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 104/247 (42%), Positives = 148/247 (59%), Gaps = 1/247 (0%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
             A A  +   T  L S  H HR+ QL     G +TC   NALW+VPP+ A+WIP GV H
Sbjct: 22  RPANAVGLSMLTGGLESEFHSHRESQLFFLERGEVTCEASNALWIVPPRSALWIPAGVLH 81

Query: 77  SNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135
             +  A  E   +F+EP     +P  CC + ++PL REL++ LA R      +    RL+
Sbjct: 82  KIRGRAPLEGYGVFMEPDVAPSLPAECCAVSVTPLFRELLVRLAARPALYDLDGPDARLV 141

Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
            VLFDEL     ++  LP+ + P++R +V+ MA+ P +   +G WA    + ER L RL+
Sbjct: 142 AVLFDELAAATIEKHRLPMPADPRLRKLVDAMAENPADGATMGSWARRIGVGERTLNRLL 201

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           V+ETGLSF +WRQQL +++ALQ L +G +VQ VA  LGY+S ++F+TMF+K LG +P RY
Sbjct: 202 VRETGLSFGRWRQQLHIVLALQRLSRGASVQSVASDLGYESASSFVTMFRKALGASPARY 261

Query: 256 IARLTTV 262
           +AR    
Sbjct: 262 MARRLGR 268


>UniRef50_A9HXG4 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria
           RepID=A9HXG4_BORPD
          Length = 284

 Score =  244 bits (623), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 112/245 (45%), Gaps = 2/245 (0%)

Query: 13  DRHHEAAVAFCIH-AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           D  H   +   +        T+  H H +GQL+ A+ G +  +  +  W +P   A+W+P
Sbjct: 35  DYQHVPRLVTALAKDFVPSETTGPHSHPRGQLVYAIEGVMRVSTPDGFWTLPSLRALWVP 94

Query: 72  GGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130
            G  H  Q+     +  L++  +A  ++   C  +++S L RELIL L         E  
Sbjct: 95  PGTVHGIQMVGKVSMRTLYVHANAANSLWDRCQVVEVSGLLRELILALTAEPIEYALEGR 154

Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190
             ++  +L  EL   P   + +P     +++T+   +   P     +  W      S R 
Sbjct: 155 GGQIATLLLTELKAAPVIPIRIPWPQDRRLQTVCRAILAQPGLARTVDDWGDEVGASGRT 214

Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250
           L RL   E GL++RQW QQ++L  AL  L  G  V +VA  LGY S +AF  MF++ LG 
Sbjct: 215 LIRLFQAEVGLNYRQWVQQVRLAEALHRLSLGQPVARVAAELGYRSPSAFSAMFRRALGS 274

Query: 251 TPGRY 255
            P  Y
Sbjct: 275 PPQAY 279


>UniRef50_Q47Y50 Transcriptional regulator, araC family n=1 Tax=Colwellia
           psychrerythraea 34H RepID=Q47Y50_COLP3
          Length = 268

 Score =  243 bits (622), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 64/243 (26%), Positives = 115/243 (47%), Gaps = 2/243 (0%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
             + +            +  H H   QL  +  G +    +  ++++PP+ A+W+P G+ 
Sbjct: 26  PRSVLPLSAEFKPMTQITS-HSHPWSQLSYSCVGVMHIETDAGIFVIPPEQALWLPPGMA 84

Query: 76  HSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134
           H +          L+ +P     +      L + PL + LIL ++N +        T+R 
Sbjct: 85  HQHFCKNKVSYRSLYFDPVLSEMLGDKVRPLTVDPLLKSLILEISNWSEDYEETEETQRF 144

Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
           + VL D L      +L +P     ++  ++E + + P     + QWA     S R L RL
Sbjct: 145 LLVLLDRLAIAKSNELFMPTIQDKRLFPIIETLNQEPANKLTIEQWALKVGASSRTLNRL 204

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
             +  G+ F +W+Q+L+++ +L+ L     +  +A  LGY+ST+AFIT FKK LG +P +
Sbjct: 205 FNQNYGMGFSRWKQKLRILKSLELLNSNARLVDIAFELGYESTSAFITAFKKQLGCSPKK 264

Query: 255 YIA 257
           Y+A
Sbjct: 265 YLA 267


>UniRef50_B4SSQ8 Transcriptional regulator, AraC family n=3 Tax=Stenotrophomonas
           RepID=B4SSQ8_STRM5
          Length = 265

 Score =  243 bits (621), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 75/242 (30%), Positives = 120/242 (49%), Gaps = 1/242 (0%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
           +  V               H+HR+ QL+ A  G +    E   W+VP   A+W+P G+ H
Sbjct: 24  QRPVTCRARHYQAGTHISPHKHRRHQLVYAQSGLMVVRSEVGRWVVPSTRAIWVPAGIAH 83

Query: 77  SNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135
           +    A   +  L++EP     +P     ++++PL REL+L  +        +    R++
Sbjct: 84  AVDCIAEVHMRSLYVEPEFAPHLPAEAFAIQVAPLLRELLLAASLIEGAHEDDSRDGRVV 143

Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
           ++L DEL +     LHLP  S P++  +   + K P +   L  WA    +  + + R  
Sbjct: 144 RLLLDELRRMDALPLHLPEPSDPRLLKICLHIQKHPADDATLQDWAQALQVDVKTIQRHF 203

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
             E G++F QWRQQ +L+ A++ L  GD V  VA  +GYDS +AF +MFK+ LGQTP  +
Sbjct: 204 TSELGMTFGQWRQQARLLAAMERLAVGDKVIDVALAMGYDSPSAFTSMFKRQLGQTPAAF 263

Query: 256 IA 257
             
Sbjct: 264 FR 265


>UniRef50_Q221Z0 Transcriptional regulator, AraC family n=9 Tax=Proteobacteria
           RepID=Q221Z0_RHOFD
          Length = 273

 Score =  242 bits (619), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 77/242 (31%), Positives = 122/242 (50%), Gaps = 1/242 (0%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
            A + F       E   P H+H  G+ + +  G +   + +  ++ PPQY +W+P  VEH
Sbjct: 21  PAPIVFRSAYVPAEGMYPQHRHAWGEFVYSFSGVMEVKLADHHYLAPPQYGIWLPPDVEH 80

Query: 77  SNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135
                  A  C L+I P     +P   C L +SPL R L+  L  +   Q       RL+
Sbjct: 81  VGLNRYEAVHCSLYIAPQGCGNLPRAACALTVSPLVRALLEHLRQQPPEQPGTLQDERLL 140

Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
           +VL D+L   P    +LP S    +  ++ M+ + P +  +L + A     +ER L R  
Sbjct: 141 RVLVDQLALAPCAGSYLPSSDDALLGAVLRMLEEQPGDNRSLPELAHAVHTTERTLMRRA 200

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            ++ G+SF +WRQ+L+++ A+  L  G TV+ +A  LGY S +AFITMFK+ +G TP  +
Sbjct: 201 RRDLGMSFVEWRQRLRVVKAMPLLEAGQTVETIALDLGYGSASAFITMFKRLVGTTPDEF 260

Query: 256 IA 257
             
Sbjct: 261 RK 262


>UniRef50_C1DH76 Transcriptional regulator, AraC-family n=3 Tax=Proteobacteria
           RepID=C1DH76_AZOVD
          Length = 296

 Score =  242 bits (618), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 80/255 (31%), Positives = 121/255 (47%), Gaps = 3/255 (1%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
           +PDR     VA            P H HR+GQL+    G +        W +PP  A W+
Sbjct: 29  DPDRSSLPVVAERY-GYPKGQRIPEHSHRRGQLMFVTSGGLRVQTRRGYWTIPPGRACWV 87

Query: 71  PGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEP 129
           P G+ H  +    AEL   ++       +P+ C  L +  L REL++   +       + 
Sbjct: 88  PCGLNHIAEYPQAAELAVAYVRTDLCEMLPSDCRVLNLGALLRELVIAAYDFGWDYGIDS 147

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
              R + VL  E+ +Q    L +P     ++R +   + + P +  +L +WA     S R
Sbjct: 148 HEARAMLVLIGEIGRQSSAPLFIPEGRDNRLRRVTAFLHRHPDDKRSLEEWASQVGASAR 207

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
            LARL   ETGLSF QWRQQL L  A++ L++G +V +VA+ LGY S  +F  MF + +G
Sbjct: 208 TLARLFRSETGLSFSQWRQQLHLTRAVEMLLEGASVTQVAYALGYASPGSFSAMFARSMG 267

Query: 250 QTPGRY-IARLTTVS 263
           + P  Y  AR   + 
Sbjct: 268 EPPSLYCRARHGALG 282


>UniRef50_Q13ID0 Transcriptional regulator, AraC family n=1 Tax=Burkholderia
           xenovorans LB400 RepID=Q13ID0_BURXL
          Length = 263

 Score =  242 bits (618), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 82/252 (32%), Positives = 120/252 (47%), Gaps = 7/252 (2%)

Query: 9   GYEPDRHHEA----AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPP 64
            + PD          V         +     H+H   QL   L G++  T E  +W V  
Sbjct: 5   HFNPDGRRSPTEFEPVTVHHRKPPLDGIISSHRHNWSQLTCPLKGSMRVTTERQVWTVTS 64

Query: 65  QYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPT-TCCTLKISPLCRELILTLANRTT 123
             AVWIP GV+H   +    E   +FI+P    +P   CC + +SPL REL+  L     
Sbjct: 65  FRAVWIPPGVDHELTMVGATEFHAVFIDPQHSPLPANQCCVVDVSPLMRELMQWLGADYG 124

Query: 124 TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183
              A   +RRL  VL +E+ +  ++   L +    +++++ E + + P     LG+WA  
Sbjct: 125 --PATDHSRRLTDVLLEEVRRATRRTSALVLPGDRRLKSLCEALMEDPGSTLTLGEWAHR 182

Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITM 243
              SER LARL   E G +F  WRQQL+L  A+  L  G ++ ++A  LGY  + AF TM
Sbjct: 183 TGASERTLARLFQIELGTTFGAWRQQLRLSCAVDLLRSGLSLSRIAADLGYADSAAFSTM 242

Query: 244 FKKGLGQTPGRY 255
           FK+  G  P RY
Sbjct: 243 FKRAFGVAPSRY 254


>UniRef50_B0UH11 Transcriptional regulator, AraC family n=3 Tax=Rhizobiales
           RepID=B0UH11_METS4
          Length = 287

 Score =  241 bits (615), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 77/233 (33%), Positives = 119/233 (51%), Gaps = 2/233 (0%)

Query: 26  AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85
                   P H H++ QLI A  G +  T  + LW++PPQ AVW+P G+ H+ +   +  
Sbjct: 36  EFPSGFHVPSHVHKRAQLIYATAGVMEVTTADGLWLLPPQRAVWMPAGIAHAMRARCDVS 95

Query: 86  LCFLFIEPSAVT--MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELP 143
           L  L+I   A     P T  ++++S L RELIL +A     +      RR++ +L  E+ 
Sbjct: 96  LRTLYIAQEACPASFPETPRSVRVSVLLRELILRVARMPLEREPTEHERRVLDLLLYEIT 155

Query: 144 QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203
            +    L+LP+    ++  + + +   P +   LG WA     S R LARL  +E G SF
Sbjct: 156 WEADGVLYLPMPKDKRLAGLCQALIDDPGDGRDLGDWARQAGASSRTLARLFKREFGSSF 215

Query: 204 RQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
             WR+QL+ + AL  L  G+ +  VA  LGY++  AF  MF+  +G+ P RY 
Sbjct: 216 LVWRKQLRALCALPRLAAGEPISVVAIDLGYETPGAFAAMFRGVMGERPSRYF 268


>UniRef50_D1SXH7 Transcriptional regulator, AraC family n=1 Tax=Acidovorax avenae
           subsp. avenae ATCC 19860 RepID=D1SXH7_9BURK
          Length = 269

 Score =  241 bits (615), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 2/266 (0%)

Query: 4   RLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63
                  +        +            +  H HR+GQLI    G ++   +   W++P
Sbjct: 2   SDTAAWIDLHDDDTGPLVVGRAGTQVNHDTAPHSHRRGQLIGCRRGVLSVGADTGHWVIP 61

Query: 64  PQYAVWIPGGVEHSNQVTANAELCFLFIE-PSAVTMPTTCCTLKISPLCRELILTLANRT 122
            ++A+W+P G  HS+++        L++  P+  ++P + CT+ +SPL  E  L  A R 
Sbjct: 62  ARHAIWLPPGRPHSSRMHGPFTGWSLYVAGPACQSLPDSPCTVAVSPLLWEAALRCAER- 120

Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182
                +P+  RL  V+ DEL     + L LP+ S  ++  +   +   P    +L  WAG
Sbjct: 121 ANALPDPVQDRLAGVILDELRSMVPRPLGLPMPSDARLLRIARGLLADPARRQSLQAWAG 180

Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242
           + A+S R L+R  V ET LSF  W Q+++L+ +L+ L  G +V +VA  LGYDS +AFI 
Sbjct: 181 WAALSPRTLSRRFVAETSLSFTAWTQRVRLLRSLEWLADGQSVTQVALDLGYDSVSAFIA 240

Query: 243 MFKKGLGQTPGRYIARLTTVSPQSAK 268
           +FK+ LG+TP  Y  R      +   
Sbjct: 241 LFKRELGRTPAAYFGRQAPADRRMPS 266


>UniRef50_Q2RRF5 Transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria
           RepID=Q2RRF5_RHORT
          Length = 247

 Score =  240 bits (612), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 79/245 (32%), Positives = 114/245 (46%), Gaps = 3/245 (1%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
              +V               H H   QL+ A+ G          W+VPP  AVW+P G+ 
Sbjct: 3   PIRSVRARTSEWPTGTVIVPHSHPWCQLVYAIGGVTIVETPEGSWVVPPDRAVWVPAGIT 62

Query: 76  HSNQVTANAELCFLFI---EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTR 132
           H  +     +   +++      A  +P  C  + +SPL RELIL    R      +    
Sbjct: 63  HCVRAARGGQNRSVYVTIEAAQAAGLPKGCKVVAVSPLTRELILEFGRRPDDYDEDGADG 122

Query: 133 RLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192
           RL++VL D++   P Q LHLP    P+   +   +   P +   L +WA     S R LA
Sbjct: 123 RLVRVLLDQIAALPAQPLHLPWPRDPRALAVARALEADPADGRPLEEWAREAGASARTLA 182

Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252
           R    + GL+F QWR +L+L+ AL+ L  G+ V  VA  +GYD  +AFI MF++ LG TP
Sbjct: 183 RTFRADCGLTFGQWRLRLRLLGALERLAAGEAVTAVAFDMGYDQPSAFIAMFRRLLGTTP 242

Query: 253 GRYIA 257
           G Y  
Sbjct: 243 GAYFR 247


>UniRef50_A4WDQ0 Transcriptional regulator, AraC family n=18 Tax=Gammaproteobacteria
           RepID=A4WDQ0_ENT38
          Length = 254

 Score =  240 bits (612), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 74/242 (30%), Positives = 122/242 (50%), Gaps = 1/242 (0%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
           +  +    H      + P HQH   QL+ +L G +        W+VPP   VW+P G +H
Sbjct: 11  QRPLVPYAHDYRHGDSEPYHQHDCAQLLHSLSGVVRVDTVAGCWVVPPGRGVWLPAGTQH 70

Query: 77  SNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135
           + ++T N     LFI+P +   +P +C  ++ISPL RELI+   +   +        R+ 
Sbjct: 71  AIRITGNVAARTLFIDPLARADLPASCQIVQISPLLRELIVASLDLPESYSPGSRDERVY 130

Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
           +++ DE+   P    HLP      +  + + + + P    +  Q A   +MSER L R  
Sbjct: 131 ELILDEIRTMPVLPFHLPEPQSEPLHQLCQQIRQDPGLAWSSAQAASLTSMSERTLNRHF 190

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            ++TGLS+ +W ++ +L+ AL  L +G  V +VA  LGY S +AF  MF++ +G +P  Y
Sbjct: 191 QQQTGLSYGEWTRRARLVEALLRLAQGQPVLRVALDLGYGSHSAFTAMFRRVMGISPSDY 250

Query: 256 IA 257
             
Sbjct: 251 FK 252


>UniRef50_Q8L1B2 Transcriptional factor PhcT (Fragment) n=1 Tax=Comamonas
           testosteroni RepID=Q8L1B2_COMTE
          Length = 246

 Score =  239 bits (610), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 2/247 (0%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           M    +    + D      V          +++  H H KGQL+ A  G +    +   W
Sbjct: 1   MATHPSHKHKQYDSLAWPVVVMESR-WPVGMSTGWHSHPKGQLLYATEGVMVVHTDAGSW 59

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA 119
           +VPP  A+WI  G+ H+  +  +  +   +I+ + VT +P     + +SPL REL++   
Sbjct: 60  IVPPNRALWITTGLRHTVTMAGDVLMRTAYIDAAKVTTLPHESSVINVSPLLRELLVEAV 119

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
                   +    RL+++L DE+       LHLP+    ++R++ + ++  P +     +
Sbjct: 120 RIAFHTEPKGRDARLLELLIDEIRVSTTLPLHLPMPKDGRLRSICDQLSATPSDSSNAAE 179

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
           WA    + ER L RL  KETG++F QWR+Q +L+ AL+G+  G+ V +VA   GY S +A
Sbjct: 180 WAASIHVGERTLHRLFAKETGMTFAQWREQARLLHALRGIAAGNKVIEVALDCGYGSASA 239

Query: 240 FITMFKK 246
           F  MF++
Sbjct: 240 FAAMFRR 246


>UniRef50_D0J513 Pyridoxamine 5'-phosphate oxidase-related protein n=2 Tax=Comamonas
           testosteroni RepID=D0J513_COMTE
          Length = 265

 Score =  239 bits (610), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 77/264 (29%), Positives = 140/264 (53%), Gaps = 6/264 (2%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           +MH L      PD     +V         EL+S +HQH +GQL  ++ G I+  V+  LW
Sbjct: 4   LMHLLGSYMDSPDG---PSVVAATRMLESELSSEMHQHARGQLFGSIKGLISVQVDGGLW 60

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLA 119
           +VP  +AVW+P    H+ +          ++ E +   +P   C +++S L RE +L +A
Sbjct: 61  VVPAIHAVWLPPHHAHAGRSFGPYHGWSAYVAEAACANLPAQPCIIRVSGLLREAVLRIA 120

Query: 120 NR--TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGAL 177
           +     + ++      +  V+ DE+   P ++  LP+ +  +++ + + +   P +   +
Sbjct: 121 SSMPQASDQSSQAQSHICAVVLDEIRSLPVEEFGLPIPADARLQRIAKALIANPADERNI 180

Query: 178 GQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDST 237
             WA F A+S R L+R  V ETG +F  WRQ+++L+ +L+ L +G ++  +A  LGY S 
Sbjct: 181 DDWASFGAISSRTLSRRFVSETGFNFTAWRQRVRLLRSLEMLAEGISITAIALDLGYASI 240

Query: 238 TAFITMFKKGLGQTPGRYIARLTT 261
           +A+I++F++  G+TP  Y +RL  
Sbjct: 241 SAYISLFRRTFGETPACYRSRLKA 264


>UniRef50_Q15UL1 Transcriptional regulator, AraC family n=3 Tax=Alteromonadales
           RepID=Q15UL1_PSEA6
          Length = 263

 Score =  238 bits (609), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 113/258 (43%), Positives = 157/258 (60%), Gaps = 3/258 (1%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           +   +L  +E     +  VA  I    +    P+H H KGQLILALHG +TC V+  +WM
Sbjct: 7   IQWDDLQQFE--VMPQPVVA-RIEKVNNSHELPLHTHSKGQLILALHGHVTCEVQGKMWM 63

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANR 121
           VP Q A+WIP    HSN+ + +AELC +FI+P  + MP   CT  +S L +ELI   A +
Sbjct: 64  VPTQSAIWIPTHTLHSNRASDHAELCHVFIQPGELRMPDKTCTFALSVLAKELICHFAKQ 123

Query: 122 TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWA 181
                    T RL QVL D + + PQQ ++LP+ SHP +  + + +   P +   L QWA
Sbjct: 124 DQHYPHFSPTNRLAQVLIDVVSESPQQPMNLPLPSHPTVAKLAQQLLSYPDDKKTLPQWA 183

Query: 182 GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI 241
            +FAMSER LARLI +ETG++F  WR Q+ +I+A+Q L+   TVQ+V+  LGY S +AFI
Sbjct: 184 SYFAMSERTLARLIKRETGMTFGHWRAQMHVIIAVQKLMTNMTVQRVSEYLGYSSVSAFI 243

Query: 242 TMFKKGLGQTPGRYIARL 259
           TMFK  LG++P RYI + 
Sbjct: 244 TMFKNILGESPKRYIKQR 261


>UniRef50_Q4ZYQ3 Helix-turn-helix, AraC type:Arac protein,
           arabinose-binding/dimerisation n=22 Tax=Proteobacteria
           RepID=Q4ZYQ3_PSEU2
          Length = 267

 Score =  238 bits (608), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 80/243 (32%), Positives = 119/243 (48%), Gaps = 2/243 (0%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
              +     + +    +P H+H   Q   A+ G +        +  PPQ+ VW+P G+EH
Sbjct: 25  PRPLYARAESLSAGSWTPPHRHDWVQFSYAISGVLGVHTAEGSFFAPPQWGVWVPAGLEH 84

Query: 77  SNQVTANAELCFLFIE-PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRA-EPMTRRL 134
               +  AE+  L+I    +   P  C  L+++PL RELI +           +    RL
Sbjct: 85  EVVTSMRAEMRSLYIRTADSGWAPQRCRVLEVTPLARELIKSFCLLPVDYPEQDSHEARL 144

Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
           +QVL D+L Q P+    LP+  HP++  +   + + P     L  WA     SE+ L RL
Sbjct: 145 VQVLLDQLAQLPEVGFSLPLPRHPRLLGLCNELIEEPGRLITLHDWAARLGTSEKTLMRL 204

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
             +ETGLSFR WRQ+ +L+ +L  L +G +V + A   GYDST+AFI  FK   G TPG 
Sbjct: 205 FQRETGLSFRGWRQRARLLSSLSALEEGASVTRTALACGYDSTSAFIAAFKGLFGHTPGD 264

Query: 255 YIA 257
              
Sbjct: 265 LFK 267


>UniRef50_B3RAF2 Putative Transcriptional Regulator, AraC family n=1 Tax=Cupriavidus
           taiwanensis RepID=B3RAF2_CUPTR
          Length = 265

 Score =  238 bits (607), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 76/251 (30%), Positives = 123/251 (49%), Gaps = 1/251 (0%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
              +   I A  + +    H+H   Q   AL G +    +   ++ PPQ+AVWIP GV H
Sbjct: 15  PRPLYGHIEALPNRVLGYRHRHPWCQFAYALQGVLEVWTDRGRFVAPPQWAVWIPAGVAH 74

Query: 77  SNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135
             +      +  L+++ S      + C  L +SPL RELI   ++            RL 
Sbjct: 75  RVRCATGTRIRSLYLDNSVCAAARSRCRVLTVSPLLRELIRAFSHLPAEYDERGADGRLA 134

Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
           +VL D+L   P+ +  LP+ + P++R +   + +      +L  W+   A+S + L RL 
Sbjct: 135 RVLLDQLGAAPEVEFMLPLPADPRVRLVCNGLQRHADRDTSLAAWSMRLAISGKTLTRLF 194

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           V+ETGL+FR WRQ+L+L+ A+  L +G+ V +VA   GY+S +AFI  F++    TPG  
Sbjct: 195 VRETGLTFRAWRQRLRLLDAVPRLERGEAVTEVALDCGYESLSAFIAAFRRLYNMTPGEL 254

Query: 256 IARLTTVSPQS 266
                 +    
Sbjct: 255 SRANRILPAGG 265


>UniRef50_D0B292 Transcriptional regulator n=40 Tax=Rhizobiales RepID=D0B292_BRUME
          Length = 289

 Score =  237 bits (606), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 82/275 (29%), Positives = 129/275 (46%), Gaps = 8/275 (2%)

Query: 1   MMHRLNLNGYEPDR------HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCT 54
           M    +L  +   R          A+A       D    P H H + QL+ A  G +  T
Sbjct: 11  MPENEDLQRFHEHRIAMLESMTGPAIALPTRY-PDGYFVPRHSHSRAQLLCASQGVVLVT 69

Query: 55  VENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRE 113
            +   WM+P  +A+WIP GVEHS  +  +  +  ++I   A++ +P     + ++ L R 
Sbjct: 70  TDAGRWMIPSDHAMWIPAGVEHSVAILGDVFMRSIYISVDAISGVPNYLHVVGLTDLMRC 129

Query: 114 LILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVE 173
           LI+   +  +    E     +I+++  +L   P+  L LP  S P+++ +     K P  
Sbjct: 130 LIIDATSHDSIPAPESRDGLVIELILRDLHTLPEYPLGLPFPSDPRLQKLCRDFVKKPSS 189

Query: 174 WGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLG 233
              + +WA   AMS R+  R   +ETG+S   WRQQ  L  A+  L +G+ V  VA  LG
Sbjct: 190 RATIDEWADRMAMSRRSFTRHFQRETGVSLSVWRQQACLFAAVPRLSEGEPVTSVALDLG 249

Query: 234 YDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSAK 268
           YDS +AF TMF++ LG  P  Y  RL     + + 
Sbjct: 250 YDSVSAFTTMFRRMLGVPPKFYQPRLDVAPFERSD 284


>UniRef50_B0RW44 Transcriptional regulator, AraC family n=6 Tax=Xanthomonas
           RepID=B0RW44_XANCB
          Length = 329

 Score =  237 bits (606), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 81/263 (30%), Positives = 132/263 (50%), Gaps = 10/263 (3%)

Query: 17  EAAVAFCIHAGTDELTSP---VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGG 73
           +  V     A    + +P    H H +GQL+    G +T   E+    +PP  A W+P G
Sbjct: 67  DGPVVVAFRADLRAVWAPETAWHAHVRGQLMYVEQGVLTVHTEHGTSSLPPGCAGWMPPG 126

Query: 74  VEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRA----E 128
            +H+ ++        + + P A T +P     +++S L RE+I+  A+   ++      +
Sbjct: 127 QQHTVELAGPLRGWGVVVRPDACTGLPARSGVIRLSGLAREVIMRAASWPLSEMLGEPVD 186

Query: 129 PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSE 188
           P  +RL  VL DEL Q P + LHLP+ +  ++  +   +   P +   L  WA +  +S 
Sbjct: 187 PARQRLAAVLLDELCQAPIEHLHLPMPADRRLLRIARQLLDTPADPRPLDVWATWGGLSP 246

Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGL 248
           R+L+R    ETGLSF QWRQQ +L   L+ L +G  V +VA  LGY S +AF+++F +  
Sbjct: 247 RSLSRHFRDETGLSFAQWRQQARLAEGLRRLSQGTAVAQVADQLGYSSPSAFVSVFHRHF 306

Query: 249 GQTPGRYIA--RLTTVSPQSAKP 269
           G  P RY+A      ++  +A  
Sbjct: 307 GAPPARYLAGGHARGLASPAASG 329


>UniRef50_B3QB90 Transcriptional regulator, AraC family n=3 Tax=Alphaproteobacteria
           RepID=B3QB90_RHOPT
          Length = 248

 Score =  237 bits (606), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 80/237 (33%), Positives = 122/237 (51%), Gaps = 1/237 (0%)

Query: 21  AFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV 80
              +        S  H H + QLI A+ G ++ T  +  W+VPP  AVW+P GVEH  + 
Sbjct: 10  VAVVSQDAHRFASRRHSHPQAQLIYAITGVVSVTTADGTWVVPPSRAVWVPAGVEHDTKS 69

Query: 81  TANAELCFLFIE-PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLF 139
            +  +   L I+    + +P  C  ++++PL RELIL L           ++R + Q+L 
Sbjct: 70  HSAVQFRSLLIDSVEVMGLPVVCMAMEVTPLLRELILRLVAIADAPGRVELSRVVTQLLL 129

Query: 140 DELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKET 199
            EL   P + L LP   HP++    + +   P    +L Q A    MS  +  RL   ET
Sbjct: 130 MELASLPVEPLSLPTPRHPQLARFCDQIRGEPAASVSLEQAARALHMSRASFMRLFQHET 189

Query: 200 GLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           G+SF +WRQQ +L+ AL  L +G ++  VA   GYDS +AF  MF++ LG++P +Y 
Sbjct: 190 GMSFLRWRQQARLLHALSLLAEGQSILNVALACGYDSPSAFSAMFRRVLGKSPSQYF 246


>UniRef50_A3Y5B2 Probable transcriptional regulator n=1 Tax=Marinomonas sp. MED121
           RepID=A3Y5B2_9GAMM
          Length = 258

 Score =  237 bits (605), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 71/231 (30%), Positives = 113/231 (48%), Gaps = 2/231 (0%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
                  +H H   QL+ A  G +    +N +  VPPQ A+W+P   +H  +V   A   
Sbjct: 26  PAGYKGQLHHHIWYQLMYASSGVLNVEYQNQIMFVPPQKAIWLPPNCDHRVRVPVGAHFH 85

Query: 88  FLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQ-RAEPMTRRLIQVLFDELPQQ 145
            ++  P  V  +  T   L ++PL RELIL +   T      +   +RL QVL D+L  Q
Sbjct: 86  SVYFRPDTVTALGNTSKVLSVTPLVRELILAVGEMTHEDKELDDKDKRLTQVLIDQLSLQ 145

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
               L + + S  ++  +V  +   P    +L +WA    +S R + R+  KE G+ F++
Sbjct: 146 ADSALSILIPSDKRLAELVRQIIHTPSNGVSLEEWAQTLNLSSRTITRIFTKEVGMGFKE 205

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           WRQ+++L+ A+  L KG +V +VA  +GY S +AF   FK+     P  Y 
Sbjct: 206 WRQKVRLLEAINLLEKGLSVTQVALEVGYQSPSAFTYAFKQVFDTNPASYF 256


>UniRef50_Q11FA3 Transcriptional regulator, AraC family n=1 Tax=Chelativorans sp.
           BNC1 RepID=Q11FA3_MESSB
          Length = 258

 Score =  237 bits (605), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 1/243 (0%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
             +V             P+H H   Q + A  G +  T+E A +++ P+ A+WIP GV H
Sbjct: 16  SRSVFLRSQKLPARHGFPMHTHPWNQFVYATTGTLMVTIEQARYVITPEQAIWIPTGVRH 75

Query: 77  SNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135
           +    ++ E   L++E    + MP  C  L +S L R LIL LA              L 
Sbjct: 76  TTTALSDVEFRNLYVEDLPNLNMPADCSVLAVSTLLRSLILELAEVEQKSDHSEYRDHLD 135

Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
            V+  ++ +  +    LP      +R + E++   P E   + +WA    MS R L+R  
Sbjct: 136 AVILVQMSRLRKLDFFLPWPHSSHLREICEVLYAHPDEPRDITEWASRAGMSARTLSRHF 195

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
             ETG+S R WR +L++  A++ L     V  +A  LG+ S +AF   F+  +G +P  +
Sbjct: 196 NAETGMSLRVWRHRLRVFRAVELLSAHWRVTDIALELGFSSASAFTYAFRTEMGCSPTEW 255

Query: 256 IAR 258
           IAR
Sbjct: 256 IAR 258


>UniRef50_Q2SEK4 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella
           chejuensis KCTC 2396 RepID=Q2SEK4_HAHCH
          Length = 255

 Score =  236 bits (604), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 113/243 (46%), Gaps = 2/243 (0%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
            +  +   + +   E     H H  GQL   L G      +   W++P     WIP GV 
Sbjct: 14  PQDILVRRLRSEGTEEREG-HSHEHGQLFCVLQGLTVVDTDAGRWLMPSNRLGWIPPGVR 72

Query: 76  HSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134
           H  Q         L++ P     +P   C  + + L   +I  +A  T  +  +   RRL
Sbjct: 73  HGAQYFGAIAGWSLYLHPDICEPLPDEPCVYEANALMTPVIARIAEWTAGEPLDAPRRRL 132

Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
           + VL DE+    Q  LHLP+    ++  +   +   P    +L   A    +SER L R 
Sbjct: 133 LHVLMDEIQAAQQPALHLPMPRDQRLLRLSHKLLATPENNDSLLALASDIGLSERTLTRK 192

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
             +ETGLS  QWRQ  +L  AL+ L +G +V + A  LGYDS +AFI +F++  G+TPGR
Sbjct: 193 FREETGLSLGQWRQLARLARALELLAQGVSVTQTALDLGYDSVSAFIALFRRYFGETPGR 252

Query: 255 YIA 257
           Y+ 
Sbjct: 253 YLK 255


>UniRef50_Q2K0F2 Probable transcriptional regulator protein, AraC family n=6
           Tax=Rhizobium etli RepID=Q2K0F2_RHIEC
          Length = 278

 Score =  236 bits (602), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 77/249 (30%), Positives = 116/249 (46%), Gaps = 1/249 (0%)

Query: 26  AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85
           A     T   H H + QL   + G++    E   ++VPP+ AV++P GV H        E
Sbjct: 30  AEPAGRTYSFHAHHRAQLFQIVRGSLRLETERGYFIVPPERAVFVPSGVLHEVTYLQETE 89

Query: 86  LCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ 144
             +LF  P AV  +P+    +  +PL RE IL                RL+ V+ D+L  
Sbjct: 90  RSYLFFRPDAVVNLPSQVSVIGTTPLLRETILAFLEIPRADAGSARAERLVAVILDQLQT 149

Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204
            P   L LP  +  ++R++   +   P     L + A   AMS R+  R    ETG+SFR
Sbjct: 150 SPVAPLSLPSPASERLRSIASDIRNEPGADWPLDELASRAAMSPRSFQRHFHTETGMSFR 209

Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSP 264
            WRQQ +L+ A++ L  G +V  +A +LGY   +AFI +F+   G +PG+Y         
Sbjct: 210 AWRQQAKLLKAVEWLAAGRSVGDIAFSLGYSGPSAFIAVFRTAFGVSPGQYFQGTFPGHG 269

Query: 265 QSAKPDPRQ 273
             +   P Q
Sbjct: 270 AGSSARPAQ 278


>UniRef50_B1TGD6 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria
           RepID=B1TGD6_9BURK
          Length = 261

 Score =  236 bits (602), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 77/264 (29%), Positives = 123/264 (46%), Gaps = 4/264 (1%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           M H    +  + D      V     +   E  S  H H++ QL+    GA+T      + 
Sbjct: 1   MAHYEPNHVLDLDAASCPIVGIAYESR--EHDSQWHAHQRTQLLYLTEGAVTLQTAERIG 58

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLA 119
            + P  A+W+P GV H   +        L+ +      +P     +++S L RELI+ + 
Sbjct: 59  HLAPLQAIWLPEGVRHRAVMHGRFAYRSLYFDVQTYRDLPRAAVIIEVSQLLRELIVRVT 118

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
                        RL+ VL DEL   P   L+LP+    ++  +   +   P E   L +
Sbjct: 119 EWPIDDALTDARTRLVSVLLDELEAAPASPLYLPMPRDRRLGAIANALVDDPSEQRTLDE 178

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
           WA     S R LARL V+ETGL++ QWR + +L++A   L +G ++ +VAH +GY S +A
Sbjct: 179 WADRVGASARTLARLFVRETGLTYVQWRTRCRLLVAQTRLAEGASITEVAHAVGYASDSA 238

Query: 240 FITMFKKGLGQTPGRYIARLTTVS 263
           FI M+++  G+ PGR   R+    
Sbjct: 239 FIAMYRRLYGEPPGR-RNRIRHPG 261


>UniRef50_B4EJY3 AraC family regulatory protein n=10 Tax=Burkholderia
           RepID=B4EJY3_BURCJ
          Length = 279

 Score =  235 bits (601), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 66/242 (27%), Positives = 109/242 (45%), Gaps = 2/242 (0%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
               +   H H   QL+ A  G +  T  +   ++PP YA+WIP  V H+          
Sbjct: 38  PGNASVDAHSHPWAQLMYATSGVLEVTTPSGRQLLPPHYAMWIPPHVPHAVSTRDCVAFH 97

Query: 88  FLFIEPSAVTMP--TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
            L+++ +         C  L ++PL REL++                 L+ ++ D + + 
Sbjct: 98  SLYLDEAIARRDVNDDCTILCMTPLLRELMIATGELPVNYDEAGPDGALVCLIADRIARM 157

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
               L +P+   P++  +   +   P +  +L +W      + R L+RL  ++TGLSF +
Sbjct: 158 QPAPLTVPLPRDPRLLKIARALHAAPGDTRSLDEWGRQVGATRRTLSRLFRQDTGLSFTE 217

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ 265
           WRQ ++L+ +L  L  G  +  VA  LGYDST++FI +F      TPG Y  R       
Sbjct: 218 WRQAVRLLASLPLLDAGAPIGTVAAQLGYDSTSSFIALFHAKFRVTPGAYAKREARRPVL 277

Query: 266 SA 267
           SA
Sbjct: 278 SA 279


>UniRef50_B4SQ42 Transcriptional regulator, AraC family n=5 Tax=Xanthomonadaceae
           RepID=B4SQ42_STRM5
          Length = 293

 Score =  235 bits (600), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 74/272 (27%), Positives = 121/272 (44%), Gaps = 1/272 (0%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           ++    L+ +E +                      H H++ QLI    G +T    +  W
Sbjct: 13  LLRDDALDWFERNDGPPVVAFRFDSPQGLVREVDWHHHQRAQLICVERGLLTTRTSHGTW 72

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELC-FLFIEPSAVTMPTTCCTLKISPLCRELILTLA 119
            + P  A W+P    H+  +             P+   +P+  C L +S L + L   + 
Sbjct: 73  SLAPGSAGWMPPLEPHTVTLDGPLRGWGMALAAPACAALPSDPCVLGLSKLAQALADRIC 132

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
                    P  + +I VL DE+   P+Q++HLP+    ++  +   +   P +  +L +
Sbjct: 133 EWPLGYATTPERQHIIDVLLDEIRTAPRQRMHLPMPHDRRLLKIASQLLADPSDERSLAE 192

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
           WA +  +S R+L R    ET LSF QWRQQ +L  AL+ L  G +V  +AH LG+ S +A
Sbjct: 193 WAHWAGLSPRSLTRHFRDETTLSFAQWRQQARLSEALRQLTDGRSVADIAHALGFSSASA 252

Query: 240 FITMFKKGLGQTPGRYIARLTTVSPQSAKPDP 271
           F+T+F++  G  PGRY+AR          P  
Sbjct: 253 FVTVFRRHFGLPPGRYLARAGHGLETGLDPAR 284


>UniRef50_Q4K6D5 Transcriptional regulator, AraC family n=8 Tax=Pseudomonas
           RepID=Q4K6D5_PSEF5
          Length = 272

 Score =  235 bits (600), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 81/258 (31%), Positives = 122/258 (47%), Gaps = 5/258 (1%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
            D  H   V+       D    P+H+HR+ Q + A  G +        W++PP  AVWIP
Sbjct: 18  IDHFHHGPVSAYPRDYPDAAHQPLHRHREAQFLYAACGTMRLVTAQGAWVIPPSRAVWIP 77

Query: 72  GGVEHSNQVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130
             VEH   +     +  LFI+P         CC L ++PL RELIL             +
Sbjct: 78  PLVEHEIFMVGEVRMRSLFIDPELSAPALRQCCVLAVTPLLRELILRAVQGPEQAENPLI 137

Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190
                Q++ +E+       LH+P+    +++ +   + + P     L  WA     S R 
Sbjct: 138 Q----QLMLEEIAALENLPLHIPMPQDRRLQAICRTLIQTPDHPHTLEDWAQQVGASSRT 193

Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250
           LARL  ++  ++F  WRQQ++L+ AL  L+ G++V  VA +LGY S  AF  MF + LG 
Sbjct: 194 LARLFQQQVQMNFNAWRQQVRLMEALPRLLAGESVHNVADSLGYGSARAFSAMFCRLLGD 253

Query: 251 TPGRYIARLTTVSPQSAK 268
           TP  Y+A L  +S  +A 
Sbjct: 254 TPRHYVAALNQLSAINAS 271


>UniRef50_B5WKD5 Transcriptional regulator, AraC family n=1 Tax=Burkholderia sp.
           H160 RepID=B5WKD5_9BURK
          Length = 277

 Score =  235 bits (600), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 70/251 (27%), Positives = 113/251 (45%), Gaps = 4/251 (1%)

Query: 9   GYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAV 68
            +  +      +A            P H H +GQ   A  G +T       W+VPPQ AV
Sbjct: 27  PFSYEEVPRDVIATE-RLYLSGFVHPDHTHTRGQFAYAAEGVMTVLTTAGNWVVPPQCAV 85

Query: 69  WIPGGVEHSNQVTANAELCFLFIEP---SAVTMPTTCCTLKISPLCRELILTLANRTTTQ 125
           W+P  V H  Q++    +   F+      A  +P  CC +  S L R+LI     +    
Sbjct: 86  WLPADVPHEMQMSGQVRMLNAFVHVRAKQASQLPRHCCVVSTSSLLRDLISEAVQQPALY 145

Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185
                  R++ +L DE+       L+ P+ + P++  +   +   P     L + A    
Sbjct: 146 NPTTRAGRIMALLVDEIAAMQPLALNAPLPNDPRLAALCREVLDAPSATLGLDEAASRIG 205

Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245
           +S R+  RL  ++ G+SF  WR+Q  L+ A+    +G+++ +VA+ LGY S TAF TMFK
Sbjct: 206 LSRRSFTRLFREQLGVSFVAWREQACLLSAIARFARGESITRVAYDLGYSSPTAFSTMFK 265

Query: 246 KGLGQTPGRYI 256
           + +G  P  Y 
Sbjct: 266 RVVGVAPYHYR 276


>UniRef50_A4CF02 Transcriptional regulator, araC family protein n=1
           Tax=Pseudoalteromonas tunicata D2 RepID=A4CF02_9GAMM
          Length = 265

 Score =  234 bits (597), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 2/250 (0%)

Query: 10  YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69
           + PD      +               H H   QL  +  G +    +  L++VPPQ A+W
Sbjct: 16  HYPDGLPHPVMPLSSEFSPMTQVI-KHAHPWSQLAYSSQGILQIETDQGLFVVPPQQALW 74

Query: 70  IPGGVEHSNQVTANAELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAE 128
           +P  + H         L  L   +     +     TL + PL + LIL + +     +  
Sbjct: 75  LPPNMTHQITCQCPTRLRSLHFQDHITAPLGDAIQTLAVGPLLQALILEVCHWGRDYQLS 134

Query: 129 PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSE 188
              +R+I VL D+L   P+Q   +P  +  +++ +V      P     L  +A     S 
Sbjct: 135 TEKQRVIDVLVDQLVSAPKQDFFIPNITDKRLQPIVSHFNHHPESKRTLNDFANQVGAST 194

Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGL 248
           R L RL +    + F QW+Q+++++ AL  L +   ++ +A TLGYDS ++FI  FK+ +
Sbjct: 195 RTLHRLFLLNFAMGFNQWKQRIRVLKALTLLDQDLPIKDIAATLGYDSDSSFIAAFKQQM 254

Query: 249 GQTPGRYIAR 258
           G  P +Y  +
Sbjct: 255 GLPPKQYRKQ 264


>UniRef50_D1P6X5 Transcriptional regulator, AraC family n=1 Tax=Providencia
           rustigianii DSM 4541 RepID=D1P6X5_9ENTR
          Length = 276

 Score =  234 bits (597), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 72/263 (27%), Positives = 115/263 (43%), Gaps = 3/263 (1%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
            H  N++    D      +A         +    H+HR+ Q +    G I  +  +  W+
Sbjct: 10  THMRNISLNTIDAVPRDVLAIGTDY-PPNVLLSAHEHRRAQFLYGATGLIEVSTADGEWV 68

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTT-CCTLKISPLCRELILTLAN 120
           +PP   VWIP    H  ++  N     L+IEP+     +  C  L++S L R+L+L   +
Sbjct: 69  IPPDCGVWIPAQTLHETRML-NVSTRSLYIEPTVAPRQSRKCEVLRVSRLLRQLLLEAVD 127

Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180
                        LIQ++  E+ +        P+     + T+       P       +W
Sbjct: 128 IPLEYDLHGREGILIQLILHEVARAKPLPFFAPIPRDTHLATLCREFLTAPHITSLPQEW 187

Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240
           A     SER+ +R    +TGLSF  WRQQ  L+ A+  +  G ++ +VA  LGY +  +F
Sbjct: 188 AKKLHKSERSFSRFFSAQTGLSFSNWRQQACLLNAITNISAGKSITEVAFDLGYCNVGSF 247

Query: 241 ITMFKKGLGQTPGRYIARLTTVS 263
            TMFKK LGQ P  +I ++   S
Sbjct: 248 STMFKKWLGQPPSSFIQQIDESS 270


>UniRef50_B7GW45 Bacterial regulatory helix-turn-helix protein, AraC family protein
           n=13 Tax=Acinetobacter RepID=B7GW45_ACIB3
          Length = 264

 Score =  233 bits (594), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 72/242 (29%), Positives = 117/242 (48%), Gaps = 2/242 (0%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
              + F +     E   P H H  G+ I A  G +   ++   ++ PP Y +W+P   +H
Sbjct: 21  PDLLWFRVRNAPAETVYPQHAHAWGEFIYAFSGVLEVNIDQINYLTPPPYGIWLPPYTKH 80

Query: 77  SNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135
           S           L++  S    +P     L  SPL   L+  L  +      +    RL+
Sbjct: 81  SGINRNEVTHATLYVHESLCQKLPQKAGILLTSPLVPALLDHL-RQNPQDETQVEYIRLL 139

Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
           QVL D+L Q      +LP + HP +  ++  + + P +   L + A    M+ER LAR  
Sbjct: 140 QVLLDQLIQAELVGSYLPTTDHPALAKILNDLHQCPADNSTLQELAERINMTERTLARYS 199

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            KE G+S  +WRQ+L+++ A+  L +G T++ +A  LGY S +AFI MFK+ +G TP ++
Sbjct: 200 QKELGMSLHEWRQRLKVMKAMTMLNQGKTIESIAFDLGYASASAFIYMFKRWMGFTPDQF 259

Query: 256 IA 257
             
Sbjct: 260 RK 261


>UniRef50_A9IA98 Transcriptional regulator, AraC family n=1 Tax=Bordetella petrii
           DSM 12804 RepID=A9IA98_BORPD
          Length = 243

 Score =  232 bits (593), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 71/239 (29%), Positives = 113/239 (47%), Gaps = 2/239 (0%)

Query: 25  HAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANA 84
           H          H H +GQL+ A  G +        W + P+ A+WI  GV+H   +    
Sbjct: 5   HDYEHGSREIWHSHEQGQLVHATSGVVRVLTSQGGWTLAPRQALWIAPGVDHELHMIGQV 64

Query: 85  ELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELP 143
            + +L IEP A   +   C  ++++PL RELIL +         E     ++ +L  +L 
Sbjct: 65  AMRWLRIEPDAAPWLWAECRQIRVTPLLRELILKMLQDPPVYPPESNAAMIVPLLLRQLQ 124

Query: 144 QQPQ-QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202
           +        LP+    ++  + E++ + P     +         S R L+RL  ++TGL+
Sbjct: 125 EAEVIVHGKLPLPRDKRLLKVCEVLIRSPANNDPMALLGERAGTSVRTLSRLFKEQTGLT 184

Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTT 261
           F QWRQQL+L  A+  L  G +V  VA  +GY +  AF TMF++ LG TP RY+    +
Sbjct: 185 FVQWRQQLRLSEAVCQLSLGQSVSSVAQDMGYATANAFSTMFRRTLGATPQRYMRETRS 243


>UniRef50_A6WQB9 Helix-turn-helix-domain containing protein AraC type n=4
           Tax=Shewanella baltica RepID=A6WQB9_SHEB8
          Length = 305

 Score =  232 bits (592), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 7/231 (3%)

Query: 32  TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91
               H H  GQ+I A  G ++       ++VPP+ AVW+P  V+H        +L  L++
Sbjct: 51  HVQRHSHPWGQVIYASQGVLSVITPAGRYIVPPEQAVWVPPFVDHEVIALGQVQLSSLYL 110

Query: 92  EPSAVT-MPTTCCTLKISPLCRELILTLANRT------TTQRAEPMTRRLIQVLFDELPQ 144
           + + +   P  C  L + P+ + L+                  +    RL+ V+ D +  
Sbjct: 111 DETQIGGFPPDCTCLSVKPVLQLLLQEANALMKSEAGLIEPDDKDSVMRLLMVIRDFMVL 170

Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204
            P+  L LP     K+  + E +   P E   L  W      S R LARL  ++TGLS+ 
Sbjct: 171 APKVALDLPYPKDKKLLRITEALLADPSEQRTLVDWQREVGASARTLARLFKQQTGLSYS 230

Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           QW Q+L+L +A+Q L +G++V   A +LGY S +AF  MF++ +G  P +Y
Sbjct: 231 QWLQRLRLQVAIQMLSRGESVLTTALSLGYASGSAFGYMFRQLMGVAPSQY 281


>UniRef50_A5FCF5 Transcriptional regulator, AraC family n=1 Tax=Flavobacterium
           johnsoniae UW101 RepID=A5FCF5_FLAJ1
          Length = 272

 Score =  231 bits (591), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 70/221 (31%), Positives = 118/221 (53%), Gaps = 1/221 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H + QLI A  G +   V N +W+V P   +WIP GVEH      +     +FI+PSA
Sbjct: 39  HSHPRAQLIYATRGVMNVVVGNNIWVVNPLQGLWIPSGVEHQVTFQKDVNYYSVFIDPSA 98

Query: 96  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
           +  +P    +  I    ++L+  + +  T+        R+I V  DEL         LP 
Sbjct: 99  IGGLPEKSFSFDIPMFLKQLVFKIISFGTSGNLTESQLRIIYVFLDELALIVPSATFLPT 158

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
           ++  +++ +VE++         +  +A    MS R L+RL +KE G++F  WR +++L+ 
Sbjct: 159 TNDERLQKVVELLMSDVSSKQTIDYYAELSFMSSRTLSRLFIKELGMNFSDWRTRMKLLE 218

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           A++ L +  +++++A  LGY++ +AFI MFKK LG+TP  Y
Sbjct: 219 AIKRLGEKQSIKEIALDLGYETASAFIYMFKKHLGKTPSNY 259


>UniRef50_C9PF84 Transcriptional regulator AraC family n=1 Tax=Vibrio furnissii CIP
           102972 RepID=C9PF84_VIBFU
          Length = 248

 Score =  231 bits (591), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 67/239 (28%), Positives = 113/239 (47%), Gaps = 1/239 (0%)

Query: 18  AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77
             V    H      T   H+H+  Q + AL+G I        W+V     +WIP GV HS
Sbjct: 4   PPVLAYAHDYMHGDTEAAHEHQCAQFLHALNGVIRVDTAAGTWVVTANKGMWIPAGVSHS 63

Query: 78  NQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136
            ++T + ++  LF++  +   +P TC   ++  L + LI+   +    + A     R+ +
Sbjct: 64  LRITGHVKVRTLFVDAMARADLPNTCVLSEVPSLLKHLIVEAVSLPEERIAGTREERIFE 123

Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196
           ++ DEL +      +LP  S   +  + + ++            A +   SER ++R   
Sbjct: 124 LILDELRRLKPVDFYLPNPSSDGLIMLCDYVSDRIAHPWTATDAAKYLGQSERTVSRKFQ 183

Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           +E GL+F +W +Q +L+ AL+ L  G +V   A  +GYDS +AF  MFK  +G TP  Y
Sbjct: 184 QELGLTFTEWLRQKRLVHALELLASGHSVLDSALEIGYDSPSAFSAMFKSRIGLTPSEY 242


>UniRef50_B6ELX6 HTH-type transcriptional regulator, AraC family n=1 Tax=Aliivibrio
           salmonicida LFI1238 RepID=B6ELX6_ALISL
          Length = 275

 Score =  231 bits (590), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 67/266 (25%), Positives = 117/266 (43%), Gaps = 3/266 (1%)

Query: 6   NLNGYEPDRHHEAAVAFCIHAGTDELTSP--VHQHRKGQLILALHGAITCTVENALWMVP 63
               + P            H    E  +    H +  GQL L   G +   V+    + P
Sbjct: 9   TYKKFMPKLTETLPTDVFCHYFFIEAKTETLPHSYSWGQLHLIKQGVLEMEVDQQKMVCP 68

Query: 64  PQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRT 122
             Y +W P   +H     ++ E C + I        P   C + ++PL R +I  L  R 
Sbjct: 69  ANYTIWTPPHQKHRAFNRSDIEYCAINITAELSEKFPKHACMIPLTPLLRAIIDDLIERK 128

Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182
           TT  +    + L  VL D L +    +++LP +    +  ++  + + P +  +L  WA 
Sbjct: 129 TTMVSSEEDKCLSYVLMDRLVKINPIEIYLPSTQDKLLAPILTQLEETPEDDSSLSVWAK 188

Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242
               +ER LAR   KE  +SF  WRQ+ +L+ A+  L +  ++ ++A+ LGY   ++FI 
Sbjct: 189 RVFSTERTLARRFQKELKMSFNDWRQRAKLVKAMTLLKESISINEIAYQLGYSQGSSFIK 248

Query: 243 MFKKGLGQTPGRYIARLTTVSPQSAK 268
           MF+K  G TP ++  +  T++ +   
Sbjct: 249 MFRKHTGVTPEQFRKQNETLTVEITS 274


>UniRef50_A0NPK3 Probable transcriptional regulator protein, AraC family protein n=2
           Tax=Rhodobacteraceae RepID=A0NPK3_9RHOB
          Length = 262

 Score =  231 bits (589), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 74/252 (29%), Positives = 123/252 (48%), Gaps = 2/252 (0%)

Query: 6   NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65
            L  +  +      + +          +  H H   QL   + G+I    E   + VPP+
Sbjct: 6   ELAEFPREAVAAPIIGYA-RTQLQGRNNGWHSHDAAQLFHVIRGSIAIDTEMGTYFVPPE 64

Query: 66  YAVWIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTT 124
            AVW+P  V H  +   + EL +++++      +P T   ++++ L R LIL   +   +
Sbjct: 65  RAVWLPPRVSHQTRYLTDTELRYIYVQYDYTRDLPKTPQVMQVTTLLRALILEFMSYPRS 124

Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184
           +  +    R+  V+ D+L   P   L LP+    ++R + E + + P    +L + A   
Sbjct: 125 ETDKGPAARIAAVILDQLKMLPVAPLQLPMPQDARLRDLCEGVVRCPAHIPSLSEAADRC 184

Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244
           A S R+  R I  ETGLS+R W +Q++L  AL+ L  G +V  V+H LGY+  +AF++ F
Sbjct: 185 ATSVRSFERRIKAETGLSYRTWCRQVKLFRALELLASGRSVSDVSHKLGYEGPSAFVSTF 244

Query: 245 KKGLGQTPGRYI 256
           KK  G TPGRY 
Sbjct: 245 KKAFGVTPGRYF 256


>UniRef50_A3RTS8 Transcriptional regulator, AraC family n=4 Tax=Ralstonia
           solanacearum RepID=A3RTS8_RALSO
          Length = 365

 Score =  231 bits (589), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 74/252 (29%), Positives = 114/252 (45%), Gaps = 3/252 (1%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
               V             P H H   Q+  +  G +     +  W+VPP  A+WIP G+ 
Sbjct: 116 PAHPVRLYTRQMQANSRFPRHTHAWAQVAYSHTGVLRVQAGDTAWVVPPSRAIWIPPGIV 175

Query: 76  HSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134
           H   V   A L  L+I+PS V      C  +++SPL RELI  +  R     A    + L
Sbjct: 176 HEVWVVEAAFLRTLYIDPSVVTDALAQCRVMEVSPLLRELIAAMDVRRPL--APAREQAL 233

Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
             ++ DEL +     L LP+ +  ++R + E +   P         A     S R LAR 
Sbjct: 234 ATLILDELRRSAPLPLDLPMPADKRLRALCERVMADPGTPLTFDALAREVGASTRTLARR 293

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
              E G++F QWRQQ  L  A+  + +G  + ++A  LGY+S +AF  MF++  GQ+P  
Sbjct: 294 FRDELGVNFSQWRQQAVLASAIPLMSQGLPLSRIAQELGYNSQSAFSAMFRRAFGQSPSA 353

Query: 255 YIARLTTVSPQS 266
           ++ R    +  +
Sbjct: 354 FLHRPGPEAEAA 365


>UniRef50_Q2BIT2 Transcriptional regulator, AraC family protein n=1
           Tax=Neptuniibacter caesariensis RepID=Q2BIT2_9GAMM
          Length = 262

 Score =  230 bits (588), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 75/246 (30%), Positives = 119/246 (48%), Gaps = 3/246 (1%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
              + + + +  ++   P   H  G+ + +  G +    E   + VPP + +W P G EH
Sbjct: 17  PEPIYYFLRSMPEDTIYPAQTHPWGEFVFSFSGVLELHAEEQEFRVPPNFGLWHPAGTEH 76

Query: 77  SNQVTANAELCFLFIEPSAVT---MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRR 133
                  +E C L+I+    T   MP T C L +SP+ RE+++ L N            R
Sbjct: 77  QGGNRNASEHCSLYIDDELATKRGMPKTSCALLVSPMLREMLIHLRNHFPKPPYTEQESR 136

Query: 134 LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193
           L+ V+ D+L   P    +LP S  P I  ++  +   P    ++   A  F MSER LAR
Sbjct: 137 LLDVILDQLIVTPIAGNYLPDSKDPLITQVLAYLKDDPGANHSIRAIAEQFGMSERTLAR 196

Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253
               E  +   +WRQ+L+++ A+  L +G +V+ VA  LGY + +AFI MFK+ LG TP 
Sbjct: 197 KAQSELNMPLSEWRQRLKVVRAVPMLQEGTSVESVALDLGYSTASAFIAMFKRLLGTTPD 256

Query: 254 RYIARL 259
            Y  + 
Sbjct: 257 EYRKKR 262


>UniRef50_C1MBM6 Transcriptional regulator n=2 Tax=Citrobacter RepID=C1MBM6_9ENTR
          Length = 261

 Score =  230 bits (588), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 2/241 (0%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
              V F  +        P H H   Q   A  G++   V    W++P  Y +WIP   EH
Sbjct: 21  PQDVFFRSYVLEANHHVPQHSHSFMQFHFARKGSMRIDVAGKCWIIPAHYGIWIPNNTEH 80

Query: 77  SNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLA-NRTTTQRAEPMTRRL 134
           +     +  L  L I+P  +      C  + IS   RE I     + +    ++    +L
Sbjct: 81  AVWALDDVYLENLDIKPGFLEESINECKVVAISDFAREFIHYATNSISGHYDSQSKEGKL 140

Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
           + VL D + Q P+    LP     ++  +   + + P    ++  WA    MS R  +R 
Sbjct: 141 VSVLVDIILQLPEVAFVLPWPQDRELTKVCRTIQESPALEHSVEYWAQHLGMSARTFSRH 200

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
             KETGL F  W+Q+++++ ++  L K  +V  VA  +GY ST AF   F++  G  P  
Sbjct: 201 FKKETGLPFSVWKQKMRILESVLMLKKNKSVTAVALDVGYSSTAAFSYAFRQAFGVPPSN 260

Query: 255 Y 255
           Y
Sbjct: 261 Y 261


>UniRef50_Q28MP8 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1
           RepID=Q28MP8_JANSC
          Length = 270

 Score =  230 bits (588), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 77/248 (31%), Positives = 116/248 (46%), Gaps = 2/248 (0%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
               V +     TD L  P H H K QLI A+ G +      + + +PP  A+ +P    
Sbjct: 23  DRPIVGYAKDYPTDHLALP-HTHPKAQLIYAVSGVMHVDTGTSSYTLPPTTALLMPANRA 81

Query: 76  HSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134
           HS  +     +  LF++    ++  + C  + +S L +ELIL   +             +
Sbjct: 82  HSIYMDGPVAMRALFLQQKQPSVDLSACKVVSVSALLKELILAACDEPVEWEQTGRAPHI 141

Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
           + +   E+ Q     L LP+ + P+I  + + +   P +  +L  WA F   SER LARL
Sbjct: 142 VALALHEIAQAVNLPLGLPLPTDPRIARVTDALRMRPADSRSLQDWALFAGASERTLARL 201

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
             KETG++F QWR Q +L  AL  L +G T+   A   GYDS  AF   F++  GQTPG 
Sbjct: 202 FRKETGMTFNQWRGQARLTAALSALSQGRTLAHAAAVAGYDSQPAFGAAFRRAFGQTPGE 261

Query: 255 YIARLTTV 262
             A+  T 
Sbjct: 262 ARAQHATR 269


>UniRef50_B2I1A9 AraC-type DNA-binding domain-containing protein n=8
           Tax=Gammaproteobacteria RepID=B2I1A9_ACIBC
          Length = 262

 Score =  230 bits (587), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 69/257 (26%), Positives = 110/257 (42%), Gaps = 3/257 (1%)

Query: 6   NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65
           N+   + D   +A +A        +     H HR+ Q + A  G +    E+  W+V P 
Sbjct: 3   NIPINDVDHLPQAVLALGSDY-PADTLLDTHSHRRAQFLYAPEGLMKVETEDGQWLVLPY 61

Query: 66  YAVWIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTT 124
             VWIP G  H     +      L+IE S A      C  +++SPL  +L++        
Sbjct: 62  SGVWIPAGKPHRVW-LSKVSTYSLYIEVSNAPRQANYCEVIQVSPLLHQLLIQANQLPID 120

Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184
            +       LI +L  EL   P   L +P+  +  +        + P    +   WA   
Sbjct: 121 YQRAGRDGSLIDLLLYELEAAPALPLFIPLPHNTLLSKQCADFMQHPDIHSSPKDWAHDH 180

Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244
             SER   R    ETG+SF+ WR ++ +I AL  L +  ++ ++A +LGY+ + AF  MF
Sbjct: 181 NKSERTFHRWFKTETGMSFQAWRNRVCIIYALNALKENISITEIAFSLGYEHSAAFTAMF 240

Query: 245 KKGLGQTPGRYIARLTT 261
            K +G  P  +  R  T
Sbjct: 241 SKIMGYPPTHFQKRFHT 257


>UniRef50_Q3JQZ2 Transcriptional regulator, AraC family n=59 Tax=Burkholderiales
           RepID=Q3JQZ2_BURP1
          Length = 450

 Score =  229 bits (585), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 78/255 (30%), Positives = 124/255 (48%), Gaps = 6/255 (2%)

Query: 5   LNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPP 64
              + + P R H   +     A    +  P H H   QL  A  G +      + WMVPP
Sbjct: 180 DVPSEFAPTRSH--PMRVRARAIAAGMRVPPHAHAWAQLAYASRGVLRLATAGSTWMVPP 237

Query: 65  QYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTT 123
             A+W+P  + H   +  +A L  L+++ SAV      C  +++S L RELI+ L  R+ 
Sbjct: 238 SRAIWVPPRIAHEVVIVEDAYLRTLYVDESAVPGGLDACRVVEVSGLLRELIVALEARSL 297

Query: 124 TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183
            +      R L +++ DEL +     L +P+ +  ++R + E +   P +  +L  WA  
Sbjct: 298 NR---TRERLLAELVLDELTRAEPLPLAVPMPTEKRLRALCEAVLAHPAQGESLEHWAAG 354

Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITM 243
              S R +ARL  +E  +SF QWRQQ  L  A+  L +G  +  +A+ LGY S +AF  M
Sbjct: 355 VGASTRTIARLFKQELSVSFSQWRQQALLARAIPLLNQGRPLSHIANELGYQSQSAFSAM 414

Query: 244 FKKGLGQTPGRYIAR 258
           F++  G +P  +I R
Sbjct: 415 FRRAFGASPRAFIQR 429


>UniRef50_A9ISK4 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria
           RepID=A9ISK4_BORPD
          Length = 393

 Score =  229 bits (584), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 83/270 (30%), Positives = 130/270 (48%), Gaps = 3/270 (1%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           M    L  +         +     +G     + +H H +GQL+ +L G ++    + LW+
Sbjct: 122 MPEPLLPLHRAQSPCGPPLIAVAASGPRPRATGMHHHARGQLLGSLRGLLSVGTGDGLWV 181

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLAN 120
           VP   A+WIP G+ H+ +          ++ P A   +P   C +  S L R  +L  A 
Sbjct: 182 VPAAQAIWIPPGMPHNLRSHGPFAGWSAYLAPQACAGLPDAVCAMPCSELLRATVLRAAA 241

Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180
                R+E    RL  V+ DE+   P+    LP+   P++  + + +A  P     L  W
Sbjct: 242 --GNSRSEAANERLAGVILDEIHALPRSAPGLPMPRDPRLLRIAQALADEPGNPRRLEDW 299

Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240
           A + AM+ R L R   +ETGL F  WRQ+L+L+ AL+ L  G  V  VA  LGYD+ +AF
Sbjct: 300 ARWAAMAPRTLMRRHQQETGLPFGDWRQRLRLMRALEMLAAGRPVTTVALDLGYDNVSAF 359

Query: 241 ITMFKKGLGQTPGRYIARLTTVSPQSAKPD 270
           I MF++  G TP RY  +   + P ++ P+
Sbjct: 360 IAMFRRAYGTTPARYFDQSRPLPPGASAPE 389


>UniRef50_A5V470 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas
           wittichii RW1 RepID=A5V470_SPHWW
          Length = 261

 Score =  229 bits (584), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 72/249 (28%), Positives = 110/249 (44%), Gaps = 1/249 (0%)

Query: 14  RHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGG 73
            H +  +    +          H+HR+GQLI A  G +  +    +W+ PP+ AVW PGG
Sbjct: 10  EHVDRPIVAVGNEYPPAFELDWHRHRRGQLIYAARGVVVVSTAQGVWVAPPERAVWTPGG 69

Query: 74  VEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTR 132
           V H+ ++        + IEP A  ++      +++SPL R L+                 
Sbjct: 70  VSHAVRMVGAVSTRSVLIEPDAHGSLGDANKVIQVSPLLRSLLAAACEIDPEYDVAGRDG 129

Query: 133 RLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192
            ++ +L  EL + P   L +P     +I    +     P     +  W+    M  R   
Sbjct: 130 MVMALLLAELARAPSVSLAVPFPKKAEIARKCQAFLDAPSPHDTIDMWSAELGMGRRAFT 189

Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252
           RL  ++TGLSF  WRQQ  L++AL  L  G+ V  +A  LGY+S  AF TMFK+  G  P
Sbjct: 190 RLFRQQTGLSFGAWRQQACLLIALPRLAAGEAVTTIALDLGYESPAAFTTMFKRLAGVAP 249

Query: 253 GRYIARLTT 261
             Y +    
Sbjct: 250 SHYQSAGRA 258


>UniRef50_B1JGH9 Transcriptional regulator, AraC family n=26 Tax=Enterobacteriaceae
           RepID=B1JGH9_YERPY
          Length = 261

 Score =  228 bits (583), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 70/239 (29%), Positives = 116/239 (48%), Gaps = 1/239 (0%)

Query: 20  VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79
           ++F   A         H H  GQLI    G +  ++    ++ PP++ VW+P G+EHS+ 
Sbjct: 17  LSFRCEAFNANTEFLPHTHPFGQLICVKSGVLAMSIGGQRFLAPPEFIVWVPAGMEHSSY 76

Query: 80  VTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL 138
                    + I     T +P +   + +SP+   ++     R          RRL  VL
Sbjct: 77  NRKPMHFRAIDIALDFCTELPASPGLMNVSPIFNAIVEDCFTRDLLMPETQQDRRLAHVL 136

Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198
            D+L   P Q+ +LP S    +  ++  + + P +  +L  WA     +ER L+R   +E
Sbjct: 137 IDQLKVSPVQRTYLPTSQDKLLSPILAALERCPADSTSLALWAKRVYTTERTLSRRCQQE 196

Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
            G++F +WRQ+L+ + A+  L +G TV  VA  +GY S +AFI MF++  G TP R+  
Sbjct: 197 LGMAFSEWRQRLRFLHAISLLEQGKTVNSVALDVGYSSASAFIAMFQQISGTTPERFRR 255


>UniRef50_C4XL68 AraC family transcriptional regulator n=2 Tax=Desulfovibrio
           RepID=C4XL68_DESMR
          Length = 350

 Score =  228 bits (582), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 108/243 (44%), Gaps = 1/243 (0%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
              V     A      +  H H  GQL  A  G I  T   +  + PP+ AVW+P G+ H
Sbjct: 14  PRLVFGRSEALPAASLARAHSHPFGQLSYAGEGVIEVTTPVSSHVAPPRRAVWVPPGLLH 73

Query: 77  SNQVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135
               T  A +  L+I        P  C  L+++ L RELIL  A        +    RL 
Sbjct: 74  EVTTTRPAAMRSLYIRADQTIFCPPRCLVLRVTRLARELILAAAALPPAYDEDGSAGRLA 133

Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
           +VL D+L   P+  L LP  + P +  +   +   P +   +   A    MS R LAR  
Sbjct: 134 RVLLDQLAGLPEADLSLPWPADPALAALCRELRDAPDDGRDMDALARQAGMSGRTLARRF 193

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
             +TGL F  WR++ +L+ AL  L  GD V   A   GY S +AF+  F+   G TPG +
Sbjct: 194 EAQTGLRFGAWRRRQRLLAALGRLEAGDNVTTAALESGYASVSAFVAAFRDMFGATPGAF 253

Query: 256 IAR 258
           + +
Sbjct: 254 LRQ 256


>UniRef50_C6RQZ7 Transcriptional regulator, AraC family n=1 Tax=Acinetobacter
           radioresistens SK82 RepID=C6RQZ7_ACIRA
          Length = 254

 Score =  228 bits (582), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 1/241 (0%)

Query: 19  AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78
            V     + TD      H+H + QL+  L G I       +W++PP   +WIP    HS 
Sbjct: 11  PVYAYAQSYTDGYVEGTHRHDRIQLLHTLSGVIHVRTSEGIWVIPPSKGIWIPENKRHSI 70

Query: 79  QVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137
           ++  N E   +F++P +     T C  + I  L  ELI                 RL+++
Sbjct: 71  KIFGNVEARGIFVDPFARADFNTQCSVVAIPKLLSELINQAVQIKEEILPHTRNERLLEL 130

Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197
           + DEL    +    LP +    ++ + E +         L   A   A++ + L+RL  K
Sbjct: 131 ILDELRFLEEIPFRLPEAKSEILKEICENIKADLSATNHLEMVAKQHALNSKTLSRLFQK 190

Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           E  ++F  W +Q +L+ AL  L     +  +A  LGY+S +AF  MFK+ +G TP  YI 
Sbjct: 191 ELNMNFSVWLKQAKLLQALTDLEMRKPILNIALDLGYESPSAFSYMFKRQMGMTPTEYIK 250

Query: 258 R 258
           R
Sbjct: 251 R 251


>UniRef50_A7K1S8 Transcriptional regulator AraC family protein n=4 Tax=Vibrionaceae
           RepID=A7K1S8_VIBSE
          Length = 264

 Score =  228 bits (582), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 1/234 (0%)

Query: 27  GTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL 86
             ++     H H +GQL+    G I    +   W++PP  A WIP G  HS     + + 
Sbjct: 29  HLEQRPHNWHSHHRGQLLCIDEGLIQVKTDEGAWILPPHRAGWIPPGAMHSVYFCGSLKG 88

Query: 87  CFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
             L   P +    P   C +++S + + L +  +  + T      + R++ V+ DE+   
Sbjct: 89  RSLLFTPESCERFPMRPCVIQMSDVLKALSVRASIWSKTDELSIQSLRILAVISDEIVNS 148

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
           P + LH+P+   P+++ + + +   P    ++  WA   A+S R L RLI  E  +SF +
Sbjct: 149 PHESLHIPLPRDPRLQKVTQAILIDPNSKHSVEHWAKIGAVSSRTLRRLIRSELNMSFSE 208

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
           WRQQ  LI +L+ + +G++V  VAH LGY + + FI MF++  G +P RY +  
Sbjct: 209 WRQQALLIHSLEMMARGESVGAVAHALGYSTPSNFIAMFRRVYGDSPTRYFSSR 262


>UniRef50_A1TK09 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria
           RepID=A1TK09_ACIAC
          Length = 276

 Score =  227 bits (579), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 79/251 (31%), Positives = 121/251 (48%), Gaps = 1/251 (0%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
             +V   +    +    P  QH  GQ +    G I  TV++  +  PP + VW+P G EH
Sbjct: 26  PDSVTVKVVQLPEGADFPTEQHPWGQFVYPRAGVIELTVKSNRYAAPPDFGVWLPPGTEH 85

Query: 77  SNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135
             +         L I+      +P     L +S + + + L L  R   +   P   RL+
Sbjct: 86  VARADGETSYFVLDIDADLCARLPRRASVLSVSAIAKAVFLDLQKRQVRKPQSPEDVRLM 145

Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
           +VL D+L         LP+SS   +R ++E + K P +   L +WA +   +ER LAR  
Sbjct: 146 EVLIDQLSASVPVDSFLPMSSDAALRNVLEALCKNPGDSRTLVEWARYVHSTERTLARRC 205

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            ++ G++F +WRQ+L+L  A   L  G  VQ VA  LGY +T+AFI MF+K +G TP  +
Sbjct: 206 TRDLGMTFLEWRQRLRLSRAFAMLADGLAVQVVAQQLGYGTTSAFIAMFQKTIGTTPNTF 265

Query: 256 IARLTTVSPQS 266
             RL   + Q 
Sbjct: 266 RGRLRDGAEQR 276


>UniRef50_Q5E435 Transcriptional regulator, AraC family n=3 Tax=Vibrionaceae
           RepID=Q5E435_VIBF1
          Length = 271

 Score =  227 bits (579), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 68/263 (25%), Positives = 113/263 (42%), Gaps = 3/263 (1%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPV--HQHRKGQLILALHGAITCTVENAL 59
           +  +    + P            H    E  +    H H  GQL L   G +   V+   
Sbjct: 8   IANMTDKKFLPQLDENLPTDVFFHYFFLEAKTETLSHSHPWGQLHLIKQGRLEMEVDKQK 67

Query: 60  WMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTL 118
              P  YA+W P  + H      + E C + IE      +PT+ C   ++PL R ++  L
Sbjct: 68  MFCPANYAIWTPAHLLHRAFNHNDVEYCAINIEFELSQKLPTSACMFPLTPLLRAIVDDL 127

Query: 119 ANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALG 178
             R TT+      + L  VL + L +    + +LP +    +  ++  + + P +  +L 
Sbjct: 128 VERQTTEVLSTEDKYLSHVLIERLSKTNPIENYLPFTDDKLLAPILMQLQENPADDSSLE 187

Query: 179 QWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTT 238
            WA     +ER LAR   KE  +SF  WRQ+ +L  A+  L    ++ ++A+ LGY   +
Sbjct: 188 IWAKRVFSTERTLARRFQKELKMSFNDWRQRAKLAKAMVLLKDAISINEIAYQLGYSQGS 247

Query: 239 AFITMFKKGLGQTPGRYIARLTT 261
           +FI MF+K  G TP ++      
Sbjct: 248 SFIKMFRKHTGVTPEQFRKEQQG 270


>UniRef50_Q7MFB7 AraC-type DNA-binding domain-containing protein n=32
           Tax=Gammaproteobacteria RepID=Q7MFB7_VIBVY
          Length = 287

 Score =  227 bits (579), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 75/245 (30%), Positives = 120/245 (48%), Gaps = 1/245 (0%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
             + V            +  H H  GQ+ L   G +    +   ++ PP  A+W+P G+ 
Sbjct: 42  PPSDVFMNFEEFLSNTETREHSHTWGQVQLISGGILEMEAQGTRFLAPPHLAIWVPPGIM 101

Query: 76  HSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134
           H +      E C L I        P   C ++++P+   +I     R      E   +RL
Sbjct: 102 HRSFNRRPLEYCSLNIAKQLTDKFPGKTCLIQVTPIVSAIIDDFRLRDINVATEESDKRL 161

Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
           +QVL D+L  +  Q   LP S H  +  ++  + + P +  +L +WA     +ER LAR 
Sbjct: 162 VQVLLDQLATKETQHHFLPSSDHKYLAPILAHVEENPTDTTSLSEWAEKVHTTERTLARH 221

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
              E G+SF +WR +++ + +++ L KG TV++VA TLGY+  + FI+MFKK  GQTP +
Sbjct: 222 CQSELGMSFTEWRLRVRYLYSMELLRKGQTVKEVALTLGYNQASPFISMFKKYSGQTPEQ 281

Query: 255 YIARL 259
           Y  RL
Sbjct: 282 YKNRL 286


>UniRef50_Q0KFJ5 Transcriptional regulator, AraC-family n=11 Tax=Proteobacteria
           RepID=Q0KFJ5_RALEH
          Length = 291

 Score =  226 bits (578), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 79/246 (32%), Positives = 114/246 (46%), Gaps = 2/246 (0%)

Query: 13  DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72
           DR      A           +  HQH   QLI A+HG +        W+VPP   +W+PG
Sbjct: 47  DRSPLPVTAMAADY-LPGHVTNPHQHPHAQLIHAVHGVMVVATTEGQWIVPPTRGMWMPG 105

Query: 73  GVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131
           G  H  ++    ++   +I P A   +P  C  L IS L RELIL   +           
Sbjct: 106 GTTHWIRMVGRVQMRTAYIRPDAAPDLPQRCTVLGISALLRELILAAIDIPLPYAPGTRG 165

Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191
            RL+++L DE+   P   LHLP  +   +R + + +   P     L  W     +  + +
Sbjct: 166 ARLMRLLLDEVMLVPSLPLHLPRPADDSLRQICDAITGAPDTALTLADWGSRLGLDPKTI 225

Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251
            R   +ETG++F QWRQQ +L+ AL+ L  G  V  VA  LGYDS +AF TMF++  G  
Sbjct: 226 QRRFARETGMTFGQWRQQARLLAALEKLAAGSKVVDVALDLGYDSPSAFATMFRRQFGVP 285

Query: 252 PGRYIA 257
           P  +  
Sbjct: 286 PSAFFR 291


>UniRef50_A3D530 Transcriptional regulator, AraC family n=12 Tax=Gammaproteobacteria
           RepID=A3D530_SHEB5
          Length = 283

 Score =  226 bits (578), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 81/269 (30%), Positives = 125/269 (46%), Gaps = 3/269 (1%)

Query: 5   LNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPP 64
           L  +           V         E     H H +GQL+ A  G +    ENA+W+VP 
Sbjct: 11  LTPSDVAFITDANRPVLTHTRNMAAEAGIEPHSHPRGQLLWAAKGLLRVRSENAVWVVPS 70

Query: 65  QYAVWIPGGVEHSNQVTANAELCFLFIEP--SAVTMPTTCCTLKISPLCRELILTLANRT 122
            +AVWIP  + H      +A    ++I+P     ++ T    + ++ L REL+L L   +
Sbjct: 71  THAVWIPCNLPHQVNSETHAHTRNIYIDPSYDVRSLDTQVVMVTMTALMRELVLKLCESS 130

Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182
               +     RL  V  DEL        HLP  S P++  +++ + + P     L + A 
Sbjct: 131 HLMNS-GQLHRLGLVAIDELETLDSLDAHLPAGSDPRLSRLIQKLIRHPTVNYTLTELAE 189

Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242
               S R + RL   ETGL++RQWRQ+ +L+ +L+ L +G++  +VAH+LGY S ++F  
Sbjct: 190 MGGASVRTIERLFKAETGLTYRQWRQRFRLLNSLESLSQGESTTRVAHSLGYLSVSSFSA 249

Query: 243 MFKKGLGQTPGRYIARLTTVSPQSAKPDP 271
            FK   G TP  Y       S  +  PDP
Sbjct: 250 AFKMQFGCTPQDYPQHKPMKSKVNWFPDP 278


>UniRef50_Q1ZB18 Transcriptional Regulator, AraC family protein n=1
           Tax=Photobacterium profundum 3TCK RepID=Q1ZB18_PHOPR
          Length = 259

 Score =  226 bits (577), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 76/245 (31%), Positives = 120/245 (48%), Gaps = 2/245 (0%)

Query: 14  RHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGG 73
           +      A   +       +  H H  GQ   A+ G +        ++ PPQYA+W+P G
Sbjct: 15  QLPRPVYARSENWDHSGTQTLWHSHAWGQWSYAIKGVLVVHTHAGRFVAPPQYAIWVPEG 74

Query: 74  VEHSNQVTANAELCFLFIEP-SAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131
           VEH    +  A++  L+I   S + +     C  ++S L +ELIL      +  +     
Sbjct: 75  VEHQVISSGAAQMRSLYIRTGSLINLCWHNACVCEVSSLAKELILRFGCFDSEYKLNGKE 134

Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191
            RL  VL D L   PQ Q  LP+ S  ++  + + +     E   + Q      +S R++
Sbjct: 135 NRLANVLLDTLDDLPQAQTQLPMPSDKRLLAIFDYLQVHTGEQINIDQIGHKVGLSGRSV 194

Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251
           +RL  +ETGL+F+QWRQ+L+L+ AL  L +   V +VA   GY+S +AF+  F K  G+T
Sbjct: 195 SRLFKQETGLTFQQWRQRLRLLSALNLLEQAMPVTQVAMECGYESLSAFVAAFGKQFGET 254

Query: 252 PGRYI 256
           PG+Y 
Sbjct: 255 PGKYF 259


>UniRef50_B5EUU3 Transcriptional regulator, AraC/XylS family n=29
           Tax=Gammaproteobacteria RepID=B5EUU3_VIBFM
          Length = 260

 Score =  226 bits (576), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 66/251 (26%), Positives = 118/251 (47%), Gaps = 1/251 (0%)

Query: 8   NGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYA 67
           +  + D     A    I A      S +H H+KGQL+ A  G ++  + +++ ++PP  A
Sbjct: 6   DETKFDADKLPADVIGIAADVGRHDSGMHYHQKGQLLYAPEGCMSFALSHSMCVLPPTKA 65

Query: 68  VWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRA 127
           VWIP    H   +T       L+ +      P     +++  L R LI  +A      + 
Sbjct: 66  VWIPANTPHRAFMTNVVAYRSLYFDCDKFPCPEDIVMIEVDELLRALINKMAMWPWD-KP 124

Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187
           +  T     + ++   +  QQ   LP+ +  ++ T  E + K       L   +     S
Sbjct: 125 KSETLHTTALFWESFYEAHQQPFSLPLPTGKRLITFSEQVQKPDFLAPDLQTLSKKIGAS 184

Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247
            + + RL  KETG+S+++W+QQ +++ +++ L +   V  VA  L + S +AFI+ FKK 
Sbjct: 185 SKTITRLFKKETGMSYQEWKQQWRVLKSIELLCENTQVSDVAFQLDFSSDSAFISFFKKQ 244

Query: 248 LGQTPGRYIAR 258
           +GQTP  +I +
Sbjct: 245 VGQTPLAFIKQ 255


>UniRef50_Q2KXY1 AraC-family transcriptional regulator n=5 Tax=Proteobacteria
           RepID=Q2KXY1_BORA1
          Length = 274

 Score =  225 bits (574), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 109/261 (41%), Gaps = 3/261 (1%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           PD    + +   + +         H H   Q++ A+ G +  T E   + + P  A W+P
Sbjct: 14  PDVLSPSPMTMRVQSIGARNYFAAHTHEWHQVVYAVSGVLMVTAEGRSFAISPNQAAWVP 73

Query: 72  GGVEHSNQVTANAELCFLFI--EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129
            G EHS      AE   L++   P             +S L + L++  A          
Sbjct: 74  SGTEHSVGSFLGAEYRSLWLADHPGGTLSKGGVAVFGVSALLKALLVEAATLQGNPDESG 133

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
              R+ +++ D+L +     L L   +   +RT+ E +   P +      W     MS R
Sbjct: 134 YFGRIYRLVLDQLCRASPISLVLAWPASAALRTLCETLYNQPADPRGPDDWGRELGMSGR 193

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
            LAR    ETGL+ R WR+QL+L  A++ L  G  V  +A  LGY S ++FI  F+  + 
Sbjct: 194 TLARKFFAETGLTLRDWRRQLKLFRAIELLESGLDVTAIALELGYGSASSFIFAFRSAMK 253

Query: 250 QTPGRYIARLTTVSPQSAKPD 270
            +P  Y  R+    P  A  +
Sbjct: 254 CSPMAY-KRIRARDPAGAPGE 273


>UniRef50_C6CCZ8 Transcriptional regulator, AraC family n=3 Tax=Dickeya
           RepID=C6CCZ8_DICDC
          Length = 282

 Score =  224 bits (573), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 106/256 (41%), Gaps = 2/256 (0%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
             +V F  +  T       HQH   + + A  G +   +E    +VP  Y VWIP  V H
Sbjct: 19  PRSVYFRTYPLTKGTQVAQHQHPFVEFLYAREGGMRMEIEGKTLIVPVLYGVWIPANVPH 78

Query: 77  SNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTL-ANRTTTQRAEPMTRRL 134
               T+N  L  L++EP        +   + IS   RE I     +            ++
Sbjct: 79  QILATSNVLLESLYVEPEYAAIDHDSSKVVVISDFVREFIHYATEHIPEQYDEAGDDGKM 138

Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
           + VL   L Q P     LP      +  +   + + P     +  WA    MS R  +R 
Sbjct: 139 VDVLTTLLRQLPDAGFSLPWPESVVLVRVCRDIQQAPDAAHGIEAWAARTGMSVRTFSRR 198

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
             KETG+SF +W+++L+L+ ++  L    +V +VA  LGY ST +F   F++  G  P R
Sbjct: 199 FRKETGVSFSEWKKRLRLLESIIMLKDNRSVTQVALDLGYSSTASFTFAFRQMFGVPPTR 258

Query: 255 YIARLTTVSPQSAKPD 270
           Y +     +     P 
Sbjct: 259 YQSAAHQSATSPPPPA 274


>UniRef50_B7UVC2 Probable transcriptional regulator n=6 Tax=Pseudomonas aeruginosa
           RepID=B7UVC2_PSEA8
          Length = 260

 Score =  224 bits (573), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 83/242 (34%), Positives = 131/242 (54%), Gaps = 3/242 (1%)

Query: 19  AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78
           AV              +H+H  GQL+ A  G +  + E   ++VP Q A+WIP  V H+ 
Sbjct: 19  AVYLRAFEMPAGHRVEMHEHPWGQLMYAASGTLRASTERHSYLVPAQRALWIPPRVRHAA 78

Query: 79  QVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL 138
           +         L+++    ++P  C  L++S L REL+L  A             RL+QV+
Sbjct: 79  EACNPVLFRSLYLD---RSLPGGCRVLEVSGLLRELLLRAAEFPREYPPGGEAERLMQVV 135

Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198
            DE+ +  +  L+LP+   P++R + + +   P +   +  WAG    S R LARL  ++
Sbjct: 136 ADEVGRLREAPLNLPLPGDPRLRRITDALQADPADPRGISDWAGLVGASRRTLARLFREQ 195

Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           T LSFR+WRQ+L+L+ A+  L +G +V +VA  LGYDST+AFI++F++  GQTPG +   
Sbjct: 196 TQLSFREWRQRLRLLNAVAALEEGASVTRVASDLGYDSTSAFISLFQRHFGQTPGCFARS 255

Query: 259 LT 260
           L 
Sbjct: 256 LR 257


>UniRef50_C7MAZ5 Transcriptional regulator containing an amidase domain and an
           AraC-type DNA-binding HTH domain n=2 Tax=Actinomycetales
           RepID=C7MAZ5_BRAFD
          Length = 261

 Score =  224 bits (572), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 81/250 (32%), Positives = 122/250 (48%), Gaps = 3/250 (1%)

Query: 24  IHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTAN 83
           IH    +  +P H H +G L+    G ++   E+  W+ PP  A WIP G  H ++    
Sbjct: 14  IHLLGHDERTPSHVHEQGHLVYPASGVLSIVTEDGSWIAPPNRAAWIPAGSFHQHRAHGA 73

Query: 84  AELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDEL 142
            ++  +F+  +A  + P     L ++PL RE   TLA  +   R      RL +V+ D+L
Sbjct: 74  TDMRIVFMADAAAGLLPAHPSVLAVTPLARE--ATLALTSDVPRTAESRERLRRVIIDDL 131

Query: 143 PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202
              P+Q LHLP     ++R +  ++ +   +   L Q        ER L+RL  + TG+S
Sbjct: 132 TAAPEQPLHLPEPRDERLRALTHLVEQEMEDPATLEQLGRRIGAGERTLSRLFQQTTGMS 191

Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262
           FRQWR QL++  AL  L  G +V   A   G+ + +AFI  F   +GQTPGRY   L   
Sbjct: 192 FRQWRIQLRIHRALLLLTDGLSVVDTATACGWANPSAFIDAFTALVGQTPGRYQRSLRGA 251

Query: 263 SPQSAKPDPR 272
           S    +  PR
Sbjct: 252 SSPLPETPPR 261


>UniRef50_C0YIN0 AraC/XylS family transcriptional regulator n=1 Tax=Chryseobacterium
           gleum ATCC 35910 RepID=C0YIN0_9FLAO
          Length = 260

 Score =  224 bits (572), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 6/258 (2%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHR-KGQLILALHGAITCTVENAL 59
           M        ++ D  HE  V            S  H H  K QL+ A  G +T T  +  
Sbjct: 1   MALLKQTEDFDADSIHEQVVGIASDMVM--HDSGFHFHTTKAQLLYAPSGCMTVTTSDRQ 58

Query: 60  WMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT--MPTTCCTLKISPLCRELILT 117
            ++PP   +WIP    H            ++ + S     M +    L ++PL +E+I  
Sbjct: 59  LILPPFRMLWIPAHEVHRVNFRNIVAYRSIYFDVSYSRKYMKSDLKVLHVNPLLKEIIER 118

Query: 118 LANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGAL 177
           +        +   T  L++V +DE+ + P+++L L +    +   + E           L
Sbjct: 119 ICFWEWPALSNDQTN-LLKVFWDEMSKAPEEKLELKMPQDKRFTKIAEEWTLRQSVPPML 177

Query: 178 GQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDST 237
              A     +E+ ++R+  KETGLS++ WRQQ +L  +++ L +G+++ +V++ L + S 
Sbjct: 178 KDLAQKAGAAEKTISRIFKKETGLSYQDWRQQWRLQRSIELLAEGNSIGEVSYILDFPSD 237

Query: 238 TAFITMFKKGLGQTPGRY 255
           +AFI  FKK  G TP +Y
Sbjct: 238 SAFIEFFKKHTGTTPLQY 255


>UniRef50_B1KGB7 Transcriptional regulator, AraC family n=2 Tax=Shewanella
           RepID=B1KGB7_SHEWM
          Length = 261

 Score =  224 bits (572), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 66/259 (25%), Positives = 115/259 (44%), Gaps = 2/259 (0%)

Query: 1   MMHRLNLNG-YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENAL 59
           M   + L    E  +     +           T   H+H  GQ + A  G +      + 
Sbjct: 1   MPKMIELTPSNESMKPLSRPIVVVNRELFIHSTVKKHRHTWGQFVYASRGVLAVATTVSR 60

Query: 60  WMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTL 118
           ++VPP+  VW+     H     ++ EL   + + + ++  P  CC L +    + LI+  
Sbjct: 61  YIVPPEQGVWVTPNTCHEVTAISDVELTSFYFDNTVLSGFPECCCVLNVEFFLKVLIVES 120

Query: 119 ANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALG 178
            +         +  RL++++ D+L    +  L LP     ++  ++  +   P     L 
Sbjct: 121 KSIDGDYEWSGVDGRLLRLIRDKLIVAIKIPLQLPYPKDSRLLAILTQLQLEPSNRNNLV 180

Query: 179 QWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTT 238
           QW      S R L+RL   ETGL++ +WRQ+  + +A+  L  G+TV  ++  LGY+S +
Sbjct: 181 QWGNIVGASARTLSRLFKNETGLTYSEWRQRFNVQVAITKLSSGETVSNISLNLGYESPS 240

Query: 239 AFITMFKKGLGQTPGRYIA 257
           +FI MF+K  G TPG Y  
Sbjct: 241 SFIYMFRKLTGVTPGFYSQ 259


>UniRef50_A9ILC9 Transcriptional regulator, AraC family n=3 Tax=Bordetella
           RepID=A9ILC9_BORPD
          Length = 308

 Score =  224 bits (572), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 69/232 (29%), Positives = 106/232 (45%), Gaps = 1/232 (0%)

Query: 29  DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88
             +  P H+H KG L+    G      +  +  + P    W+P G+ H      +A   F
Sbjct: 77  RGIAVPAHRHDKGMLLAVREGVSVVRSDGEVLTMTPGRLGWMPPGMLHEAHWFGDARGLF 136

Query: 89  LFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147
           L++   A   +P   C     PL   L+  LA     ++    T RL +VL  EL   PQ
Sbjct: 137 LYVRADACDSLPAQACAWASGPLVEALLQRLAGIPPDEQNLAHTLRLFEVLVAELRILPQ 196

Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207
             L LP+    ++  +   +   P +   +  WA    MS R L R    ETG++  +WR
Sbjct: 197 ASLPLPMPRDHRLHELATTLLDRPDDARGIEAWARRVNMSSRTLMRRFRAETGITLGRWR 256

Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
           QQ +L+ +L+ L  G  V + A  +GY+S +AFI+ F+   G TP +Y AR 
Sbjct: 257 QQARLLRSLEWLAAGKPVTEAALAVGYESISAFISSFRNAYGVTPSQYFARH 308


>UniRef50_B2UKA3 Transcriptional regulator, AraC family n=8 Tax=Betaproteobacteria
           RepID=B2UKA3_RALPJ
          Length = 265

 Score =  224 bits (571), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 1/257 (0%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
           +      A   F       E     H H  GQL     G +   VE      P +Y +W+
Sbjct: 9   DLRVPTGAPFYFRYDHFQPETDIEPHTHPWGQLNRIALGLMEVVVETRRLTAPAEYLIWV 68

Query: 71  PGGVEHSNQVTANAELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEP 129
           P    HS  +    +   +++ EP A  +P   C ++ +PL R L+     R  +  A+ 
Sbjct: 69  PANQPHSASIRQATDFLSVYVAEPLARRLPPMACLIQQTPLVRALLEDFQARRISVMADD 128

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
              R  ++L + L +      +LP S   ++  +++ +   P +   L  WA     +ER
Sbjct: 129 WDLRQFELLVEMLGRAGHTDSYLPDSKDRQLEPILQAIRLFPADNTPLKTWAERVHSTER 188

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
            LAR    E G+SF QWR +++L+ AL  L +  ++Q +A  LGY + +AFI MF+K +G
Sbjct: 189 TLARRFQHELGMSFVQWRNRVRLLRALVWLKEDCSIQDIALALGYGTPSAFIAMFRKQIG 248

Query: 250 QTPGRYIARLTTVSPQS 266
            +P RY  ++     ++
Sbjct: 249 FSPQRYRRQMCGEVARA 265


>UniRef50_B1JZJ0 Transcriptional regulator, AraC family n=2 Tax=Burkholderia
           cenocepacia RepID=B1JZJ0_BURCC
          Length = 261

 Score =  224 bits (571), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 82/259 (31%), Positives = 117/259 (45%), Gaps = 3/259 (1%)

Query: 2   MHRLNLNGYEPDRHHEA-AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           M    L  Y   R      VA  +           HQHR GQL+ A  G +        W
Sbjct: 1   MKAFLLKRYPLARVPLPRQVAATLVNYRQGERVTWHQHRHGQLVFAAKGVVRVLTPARTW 60

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLA 119
            +PP  AVW+P  V+H      +  LC +++EP     P      + +S L REL LT+ 
Sbjct: 61  TLPPSRAVWLPSDVDHELHAVGDTALCSVYMEPEVFPWPWEEPAVIAVSALLRELALTVV 120

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH-LPVSSHPKIRTMVEMMAKGPVEWGALG 178
           +   T  A         +L   L + P      +P+    ++  + E M   P     L 
Sbjct: 121 DGADTYTATSRAGLAASLLMKVLAETPSLAEPGVPLPRDERLLKLCEHMMNDPASDLTLD 180

Query: 179 QWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTT 238
            W   F  S R LAR +  ETGL+F  WRQQ+++  A+  L  G +V +VA  LGY S +
Sbjct: 181 FWGEQFGASGRTLARRLHAETGLTFVAWRQQMRVAEAMTRLALGQSVARVAKDLGYRSAS 240

Query: 239 AFITMFKKGLGQTPGRYIA 257
           AFI MF++  G++P RY+A
Sbjct: 241 AFIVMFRRITGESPQRYLA 259


>UniRef50_A6V4X5 Probable transcriptional regulator n=7 Tax=Pseudomonas aeruginosa
           RepID=A6V4X5_PSEA7
          Length = 254

 Score =  223 bits (570), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 67/248 (27%), Positives = 106/248 (42%), Gaps = 1/248 (0%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
              A  F +        +  H H  GQL     G +    E     +PP+   WIP G  
Sbjct: 5   PLPAPLFALRLDRATSRTAPHSHACGQLYCLERGLLVVEDERGRQALPPRQIAWIPPGHR 64

Query: 76  HSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134
           H+            +++ S    +P +   L  S     ++                  L
Sbjct: 65  HAAHSHGALLGWSAYLDTSHCHALPASPGVLACSDFVALIVERATRWPAGSAWSAERENL 124

Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
           ++VL DEL     Q+  LP    P++R + E +   P +     +WA +  +S R+L+RL
Sbjct: 125 LRVLLDELRHAVPQRTRLPYPGDPRLRRIAEALLANPGDPRPAAEWARWAGLSSRSLSRL 184

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
              ETG+SF QWRQ  +L  A++ L  G  V +VA +LGY+S ++F + F+   G+TP  
Sbjct: 185 FGTETGMSFAQWRQLARLHAAVERLAAGQAVGEVAWSLGYESPSSFASAFRAVFGETPSG 244

Query: 255 YIARLTTV 262
           Y +R    
Sbjct: 245 YSSRAAEA 252


>UniRef50_Q7CRR0 Transcriptional regulator, AraC family n=4 Tax=Rhizobiaceae
           RepID=Q7CRR0_AGRT5
          Length = 284

 Score =  223 bits (570), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 67/254 (26%), Positives = 117/254 (46%), Gaps = 2/254 (0%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
            D  +E  +A           +P H H + Q+  A  G +  +  +  WM+PP + + IP
Sbjct: 24  IDGTNEPVLALH-RVYPTGHRTPPHSHSRVQIWCARQGVVLVSTADGRWMIPPGHGLLIP 82

Query: 72  GGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131
            G++H  ++ +N E+  +++ P       +   ++I+ L   LI  L        A    
Sbjct: 83  AGLQHEAEIISNVEMHSIYVHPELFQA-ESPKVVEITDLASSLISELLAEEHQPSAFHRQ 141

Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191
             +  +L DE+ + P++ L LP   + ++  +     + PV    + +WA   ++S R+ 
Sbjct: 142 GLVRALLLDEVNRLPERPLGLPFPDNQRLAALCRDFLRKPVARVEIDEWAAAMSISRRSF 201

Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251
            RL  +E G+SF  WRQQ  +  +L  L  G+ V  VA   GY++  AF TMF++ LG +
Sbjct: 202 TRLFRRELGVSFVTWRQQACIFASLPRLAAGEAVTNVALDAGYENIPAFTTMFRRMLGSS 261

Query: 252 PGRYIARLTTVSPQ 265
           P  Y       S  
Sbjct: 262 PRAYRQAARQRSAA 275


>UniRef50_Q39NN6 Transcriptional regulator, AraC family n=9 Tax=Betaproteobacteria
           RepID=Q39NN6_BURS3
          Length = 266

 Score =  223 bits (569), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 79/250 (31%), Positives = 129/250 (51%), Gaps = 1/250 (0%)

Query: 7   LNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQY 66
              + P       V+          +   H+HR+ QL+ A+ G +    E A W+VPP  
Sbjct: 15  PGAHLPFESTPMPVSAMAATYAHGTSIAPHRHRRAQLLYAIEGVMHVQSEGASWVVPPTR 74

Query: 67  AVWIPGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQ 125
            VW+  G++H+ Q++ + ++  +F+EP AV  +P   C +++ PL RELIL   +     
Sbjct: 75  GVWLEAGLDHTVQMSGDVQMRTVFVEPGAVEHLPARSCVVEVHPLLRELILAAVDVPLDY 134

Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185
                   L+ +L  E+   P   L+LP    P++RT+ + +   P +   + +WA    
Sbjct: 135 APGSRHDHLMHLLLAEVTVAPLLPLYLPWPHDPRLRTICDALVAAPDDLRTIAEWADLLG 194

Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245
           +S R L R   +ETGLSFR+WR+Q +L++AL+ L  G+ V  VA   GY S +AF  MFK
Sbjct: 195 LSVRTLHRAFRRETGLSFRRWREQARLLLALKRLAHGEKVLTVAMDHGYSSQSAFSAMFK 254

Query: 246 KGLGQTPGRY 255
           +  G +P  +
Sbjct: 255 RHFGVSPSAF 264


>UniRef50_A6V354 Transcriptional regulator, AraC family n=3 Tax=Pseudomonas
           RepID=A6V354_PSEA7
          Length = 244

 Score =  223 bits (569), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 1/233 (0%)

Query: 26  AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85
              D      H H + QLI A+ G +        W+VP  +A+W+P   EH  +++ +  
Sbjct: 9   DHHDGEEILPHCHAQAQLIHAISGVMLVGAARRNWVVPAGHALWVPPNTEHQIRMSGSVR 68

Query: 86  LCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ 144
           +  LF+  +        C  + +SPL REL++  +       +    R + ++L  EL  
Sbjct: 69  MRTLFMPAATWPRDGEQCQVIAVSPLLRELLVAASEMHLGDSSAQRRRCIHELLLVELDA 128

Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204
                +HL +   P++  +   +   P E   +  WA    MS R LARL  +E G+SF 
Sbjct: 129 AQTIGIHLVMPRDPRLLRLCSQVIGTPAEETRMEDWARQLNMSSRTLARLFQRELGMSFG 188

Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
            WR + +++++LQ L  G +V +VA   GY S +AF   FK+ LG +P  Y A
Sbjct: 189 DWRTRARMVLSLQRLSAGASVLEVALEHGYQSPSAFSQTFKRTLGHSPSHYQA 241


>UniRef50_B7GXZ6 Bacterial regulatory helix-turn-helix protein, AraC family protein
           n=12 Tax=Acinetobacter RepID=B7GXZ6_ACIB3
          Length = 262

 Score =  223 bits (569), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 70/243 (28%), Positives = 121/243 (49%), Gaps = 6/243 (2%)

Query: 20  VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79
           V       +    +P H H + Q + A  G I     N +W+VPP  A+WIP  VEHS  
Sbjct: 14  VIGLSSEHSYREITPTHTHTRAQFLYASTGNIQVFTPNHVWIVPPMCALWIPANVEHSVI 73

Query: 80  VTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANR-----TTTQRAEPMTRR 133
             ++ +L    +E  +A  M   C  +++S L  EL++ L          T  ++ ++R 
Sbjct: 74  SLSHVKLNTALVEVNAAARMGQHCFIIRVSNLLHELLIRLNEIEREETPNTATSQELSRS 133

Query: 134 LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193
           L  ++F+E+ +     + +P     ++  + + +   P     L  WA     S R L R
Sbjct: 134 LQILIFEEIQRANLLPIQIPWPKDKRLLKICQELLHTPNHSRDLTDWADDIGASSRTLMR 193

Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253
           +  KETGLS+R W QQ+ + +AL  +  G ++ +++ +LGY + +AF  MFK+ LG+TP 
Sbjct: 194 MFQKETGLSYRAWVQQMHIALALSKIANGKSIAQISESLGYTNPSAFSAMFKRHLGKTPQ 253

Query: 254 RYI 256
           ++ 
Sbjct: 254 QFR 256


>UniRef50_A8GH45 Transcriptional regulator, AraC family n=18 Tax=Enterobacteriaceae
           RepID=A8GH45_SERP5
          Length = 257

 Score =  223 bits (569), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 71/257 (27%), Positives = 115/257 (44%), Gaps = 2/257 (0%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           M  +                F             H+H  GQL+    G +   +    ++
Sbjct: 1   MPEIRHYPEALIPAPRPVQ-FRCEEFNARTEFQPHRHSWGQLMWVKAGVMVLRIGGQRFL 59

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFIE-PSAVTMPTTCCTLKISPLCRELILTLAN 120
            PP++ +W P  +EHS      A+   + I  P    MP   C + ++P+ R +      
Sbjct: 60  APPEFVLWAPAEIEHSCYNQRLAQCRMVDIALPLCAGMPVDPCLVSVTPIFRAIAEDFYA 119

Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180
           R           RL + L D+L   P QQ +LP S    +  ++E +   P +  +L  W
Sbjct: 120 RKQYIPQSKQDLRLCRALIDQLHLSPVQQTYLPSSEDKFLAPVLEALEHCPSDNTSLAAW 179

Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240
           A     +ER L+R   ++ G+SF +WRQ+L+ + A+  L +G TVQ+VA  +GY S +AF
Sbjct: 180 AARVYTTERTLSRRCQQDLGMSFSEWRQRLRFLHAVSLLEQGKTVQEVALEVGYSSASAF 239

Query: 241 ITMFKKGLGQTPGRYIA 257
           I MF++  G TP R+  
Sbjct: 240 IVMFQQIAGTTPERFRR 256


>UniRef50_Q7D3B7 Transcriptional regulator. AraC family n=2 Tax=Agrobacterium
           tumefaciens RepID=Q7D3B7_AGRT5
          Length = 264

 Score =  223 bits (568), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 74/254 (29%), Positives = 127/254 (50%), Gaps = 1/254 (0%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
            A ++F   +          +    ++  AL G +   VE   ++ PP YA WIP    H
Sbjct: 11  PAPLSFRTESYEAGGIFEEKRQPWCKVGYALTGVMEARVEGKRFLCPPHYATWIPADAVH 70

Query: 77  SNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135
           +     N +   ++I+      MP T CTL +SPL + ++   A R  T       RRL 
Sbjct: 71  ACHNRENVKFVSIYIDRDLCAGMPETACTLALSPLIKAILADFAERRITVPQTEADRRLA 130

Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
            VL D+L   P+++  LPVS+   ++ +++ +   P +  +L +WA     +E+ L+R  
Sbjct: 131 FVLVDQLLNAPRRESFLPVSNDDLLQPVIDALQADPGDRRSLSEWARLLQTTEKTLSRRF 190

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           +   G+SF +WRQ+L+L+ +L  +  G +VQ +A TLGY+S +AFI MF++  G +P   
Sbjct: 191 LGHLGVSFNEWRQRLKLVASLSLIEDGKSVQSIAKTLGYNSPSAFIAMFRRLTGTSPTNL 250

Query: 256 IARLTTVSPQSAKP 269
            +        ++ P
Sbjct: 251 RSTPARTIKAASTP 264


>UniRef50_C8Q2C9 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b
           RepID=C8Q2C9_9ENTR
          Length = 261

 Score =  223 bits (568), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 75/243 (30%), Positives = 118/243 (48%), Gaps = 3/243 (1%)

Query: 18  AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77
             +               H H   QL+L L G +      A W + P  A+W+PG V H+
Sbjct: 16  PLLTTREMHYHAGREERWHAHEVAQLVLCLQGVMRVQTHTASWTLTPGRALWLPGTVPHA 75

Query: 78  NQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136
               ++     L++EP           ++ ISPL + L+ TL         +P+   LI 
Sbjct: 76  LTALSDIRSLSLYLEPVVARAFWPEARSMMISPLLQALMQTLVEIGLQPHPDPLRAELIT 135

Query: 137 -VLFDELPQQPQQQLH-LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
            +L DEL + P+  +  LP+ +  ++  + + + + P     L +W      S R LARL
Sbjct: 136 PLLLDELRRAPEGPVCVLPLPADRRLMNICQQLLQSPASSDTLEEWGSRVGASSRTLARL 195

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
              +TG++F QWRQQL+L  AL  L +G  V ++A  LGY S +AFI+MF++ LG TP R
Sbjct: 196 FRDQTGITFTQWRQQLRLSEALVQLAQGQPVLRIASQLGYQSPSAFISMFRRLLGDTPQR 255

Query: 255 YIA 257
           ++ 
Sbjct: 256 FLR 258


>UniRef50_C5CUS1 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus
           S110 RepID=C5CUS1_VARPS
          Length = 280

 Score =  222 bits (567), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 7/267 (2%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           +  L  + Y PD      +    H  + +    +HQH   QL  +  G I  + ++  ++
Sbjct: 14  VASLTPHLYAPDAV--RPLRAKEHFLSADTFVELHQHPWPQLTFSTRGVIRLSTQDGSYI 71

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANR 121
           VPP  AVW+P  + HS  +  +AEL  +++          C  L+ISPL R L+L L   
Sbjct: 72  VPPSRAVWVPANMPHSIMLIEDAELRTVYLHAWLGPPWEKCEVLEISPLLRALMLALDTT 131

Query: 122 T-----TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGA 176
                     A    R +  +L DEL +  Q ++ +P+ S  ++R + E + + P +   
Sbjct: 132 PDGLPPADPHAPQRERMIAPLLVDELERATQIRIDVPLPSDKRLRQLCETLLRNPADRAT 191

Query: 177 LGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDS 236
           L + A     SER +ARL   + G+S++QWRQQ  +  AL  L +G  V +VA   GY +
Sbjct: 192 LAERAAAIGASERTVARLFRDQLGMSWQQWRQQAVMAHALPLLARGMAVSQVAAASGYAT 251

Query: 237 TTAFITMFKKGLGQTPGRYIARLTTVS 263
            +AF  MFK   G++P  +  +  + +
Sbjct: 252 DSAFCAMFKAATGRSPTSFQHKKRSAA 278


>UniRef50_D2B3A1 AraC family transcriptional regulator n=5 Tax=Actinomycetales
           RepID=D2B3A1_STRRD
          Length = 265

 Score =  222 bits (567), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 71/238 (29%), Positives = 115/238 (48%), Gaps = 4/238 (1%)

Query: 19  AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78
            +       +       H H   QL     G ++  V++A W++PP  A+W+P GV H  
Sbjct: 22  VIVVGHFPLSSGQWISPHSHTHHQLAWTRSGVLSVAVDDAYWVLPPTRALWLPAGVVHRT 81

Query: 79  QVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137
             T +A LC L++ P   T+  T    + ++ L   LI  LA       A         V
Sbjct: 82  GATRDALLCSLYLNPVRCTLNWTEPTAVGVNGLLAHLIAYLAREDLADDARLRAE---AV 138

Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197
           + D L   P   + +P     ++R + + +   P +  +L   A    +S R L RL V+
Sbjct: 139 VLDLLHPLPALPIDVPRPVDERVRAVADTLLADPSDSRSLEAHARSIGVSRRTLTRLFVR 198

Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           +TGLSF +WR  ++L  AL  L +G  V +V+HT+GY + +AF+  F++ +G +PGRY
Sbjct: 199 DTGLSFDRWRTHMRLRAALPLLAEGRPVSQVSHTVGYATPSAFLAAFRRTVGTSPGRY 256


>UniRef50_Q7D2T6 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria
           RepID=Q7D2T6_AGRT5
          Length = 215

 Score =  222 bits (566), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 102/215 (47%), Positives = 141/215 (65%), Gaps = 2/215 (0%)

Query: 45  LALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCT 104
           + L G +TC V + +WMVPP   VW+PGG+ HSN  TANA L FLFIEP A  +P  CCT
Sbjct: 1   MPLRGGVTCRVPSGMWMVPPHCGVWVPGGMLHSNVATANARLFFLFIEPGAADLPNRCCT 60

Query: 105 LKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMV 164
           L +SPL RELI+ LA+++    A+     +  +L   L + P + LHLP++  P++  + 
Sbjct: 61  LSLSPLVRELIIELADQSEVATADS--ELMTTLLLSALSRMPVEHLHLPLTDEPRLARIA 118

Query: 165 EMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDT 224
             +A  P +   + QWA   AMSE +LARL+  +TGL+F +WRQQLQLI+A++ L  G T
Sbjct: 119 SELADDPSDRSTMAQWARRVAMSENSLARLVQHQTGLTFGRWRQQLQLIIAIRSLASGAT 178

Query: 225 VQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
           VQ+V+  LGY+S +AFITMFKK LG +P RY+   
Sbjct: 179 VQQVSGDLGYESVSAFITMFKKALGTSPSRYLRNF 213


>UniRef50_Q01YV9 Transcriptional regulator, AraC family n=1 Tax=Candidatus
           Solibacter usitatus Ellin6076 RepID=Q01YV9_SOLUE
          Length = 257

 Score =  221 bits (565), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 69/231 (29%), Positives = 105/231 (45%), Gaps = 3/231 (1%)

Query: 27  GTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL 86
            +       H+H   QL+ A+ G++T       W++PP  AV+IP    HS ++     +
Sbjct: 26  YSSGYQMEEHEHPWRQLLYAISGSMTVYAGRWSWIIPPGKAVFIPADCRHSMRMWGQVAM 85

Query: 87  CFLFIEPSA---VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELP 143
             L+   +          C  L ++PL RELIL +          P   RL  +L DE+ 
Sbjct: 86  RSLYFPAAWEVSAFASPECFVLSVTPLLRELILRVIEWAALDSRVPEHARLAALLVDEIA 145

Query: 144 QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203
             P   L LP+    +   + + +   P    +L   A   A   R L RL   ETG+SF
Sbjct: 146 CAPVTPLLLPLPIDARAAAVAQSVLASPARNDSLDDLARRHATGRRTLERLFRDETGMSF 205

Query: 204 RQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
             WRQQ +L+ ++  L +G  V + A   GY S +A+I  FK+  G TPG+
Sbjct: 206 GMWRQQARLLHSVGALAEGKPVTEAALDAGYASLSAYIAAFKRTFGCTPGK 256


>UniRef50_A5F0T8 Transcriptional regulator, AraC/XylS family n=40 Tax=Vibrionaceae
           RepID=A5F0T8_VIBC3
          Length = 263

 Score =  221 bits (565), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 74/247 (29%), Positives = 119/247 (48%), Gaps = 1/247 (0%)

Query: 14  RHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGG 73
            H  + V     A      +  H H  GQ+ L   G +    E+  ++ PP  A+W+P G
Sbjct: 15  EHPPSDVFMNFEAFLSNTETREHSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAG 74

Query: 74  VEHSNQVTANAELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTR 132
           + H +      E C L I        P     +K++ +   +I     R          +
Sbjct: 75  IRHRSYNRKPIEYCSLNIASQLTTAFPAKTSLIKVTSIVSAIIDDFRERNINVAQSSEDK 134

Query: 133 RLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192
           RL+QVL D+L  +  Q   LP ++H  +  ++  + + P +   L QWA     +ER LA
Sbjct: 135 RLVQVLLDQLATRETQHHFLPSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLA 194

Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252
           R    E G+SF +WR +++ + +++ L +G  V++VA TLGY+  + FITMFKK  G TP
Sbjct: 195 RHCQAELGMSFTEWRLRVRYLYSMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTP 254

Query: 253 GRYIARL 259
            +Y +RL
Sbjct: 255 EQYKSRL 261


>UniRef50_C9NXQ1 Transcriptional regulator AraC family n=1 Tax=Vibrio
           coralliilyticus ATCC BAA-450 RepID=C9NXQ1_9VIBR
          Length = 243

 Score =  221 bits (565), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 2/232 (0%)

Query: 26  AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85
                  +  HQH   QL     G  T    +  W + P    WIP  ++H + V A+ E
Sbjct: 10  HHPAASETEWHQHEYAQLYWLNKGIFTIETSDQQWTITPACLGWIPPHLQHRSDVVADIE 69

Query: 86  LCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ 144
              +++  + +   P     ++ + L + LI  + +   +    P  +R  QVL DE+  
Sbjct: 70  AVMIYVPLTWLNAFPQQAKVIQSNTLIQALIERITHFDLSAMTAP-QQRQFQVLLDEIHL 128

Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204
            P   L+LP+    K+R + + +   P +  +  + A  F  S R L+RL  KETG++F 
Sbjct: 129 APASNLYLPLPKEAKMRQIADTLLATPDDARSQTELAHDFGTSTRTLSRLFKKETGMAFG 188

Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
            WRQQ +L+ +L  L KG ++  VA + GY +T++FIT FK   G TP  Y 
Sbjct: 189 FWRQQARLVSSLPMLEKGLSITYVALSCGYSNTSSFITAFKARFGVTPSVYF 240


>UniRef50_Q4KJ22 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria
           RepID=Q4KJ22_PSEF5
          Length = 262

 Score =  221 bits (565), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 73/257 (28%), Positives = 119/257 (46%), Gaps = 2/257 (0%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           M + +++  +                        H+H  G L  + HG +   +    +M
Sbjct: 1   MSKKHIDLLDFHGLPAPVYFRYADFAAHSHALE-HRHPWGCLEYSAHGVMHMEIAGQRFM 59

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLAN 120
            PPQYAVW+P    HS           + + P     +P    TL IS + + ++   A 
Sbjct: 60  SPPQYAVWVPPQTPHSFYTAQPINYRAVLLAPELCAELPAGGSTLAISEILKAILKDFAA 119

Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180
           R          +RL QVL D+L Q P    +LP +S P +  +++ +   P     L  W
Sbjct: 120 RDVQIPEGEADQRLAQVLLDQLRQAPVHTCYLPYASSPDLLRVLQALQAEPGNNQPLAHW 179

Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240
           AG   +SER LAR  V+E G+SF +WRQ+ + + +++ L    ++Q++A  +GY S +AF
Sbjct: 180 AGLAHVSERTLARQFVRELGMSFGEWRQRQRFLASIEALESSRSIQEIAFDMGYSSASAF 239

Query: 241 ITMFKKGLGQTPGRYIA 257
           I MF++  G TP +Y  
Sbjct: 240 IAMFQRQAGSTPEQYRR 256


>UniRef50_Q2BQ21 Transcriptional regulator, AraC family protein n=1
           Tax=Neptuniibacter caesariensis RepID=Q2BQ21_9GAMM
          Length = 235

 Score =  221 bits (565), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 1/234 (0%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
             +   P HQH   QL+ A  G +   V      +PP+ AVWIP G EH       + L 
Sbjct: 2   PPQHFFPKHQHEWHQLLYATSGVLIVEVLGERLFIPPEKAVWIPQGHEHQVYSEYGSSLK 61

Query: 88  FLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146
            L+IE     +   T   LKI+PL ++LIL  +  +     +     LI ++   L +  
Sbjct: 62  SLYIEHSDQFSDWQTSKVLKITPLLKQLILEASTFSVHYSRQGYEAELIALMLASLHRLE 121

Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206
                LP  +   +  + +M  + P       + A   ++S+R L R  +KETG+S +QW
Sbjct: 122 TDHDQLPWPASRDLYRLCQMFYEQPSLRKTTAKLAIELSVSKRTLERKFMKETGMSVQQW 181

Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260
             QL+ + +L+ L  G ++  +A  LGY S+ AFI MF+   G +PG++I    
Sbjct: 182 LLQLRFLKSLELLSAGYSITHIALELGYGSSAAFIHMFRDKTGVSPGQFIKNAR 235


>UniRef50_UPI00019092C6 AraC family transcriptional regulator n=1 Tax=Rhizobium etli CIAT
           894 RepID=UPI00019092C6
          Length = 283

 Score =  221 bits (563), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 71/224 (31%), Positives = 103/224 (45%), Gaps = 1/224 (0%)

Query: 33  SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92
              H+HR+GQL+ A  G I  T     W++PP   +WIP GV HS +      +  L++E
Sbjct: 2   IEPHEHRRGQLMNATSGLIVLTTPEGKWVMPPHRGMWIPAGVRHSVRAGGLVRMQSLYVE 61

Query: 93  PSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151
                 MP  C  L+I+   R LI  +   +     +  ++ L+ +   E+ + P   L 
Sbjct: 62  TDRAEAMPVHCQVLEITTFMRSLIGEVVGLSLDTEVDGRSQALMDLTLYEMERLPSLPLS 121

Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211
           LP  S  +           P        W+    MS R   R+  ++TGLSF  WRQQ  
Sbjct: 122 LPFPSDERFAKKCREFVGQPNIHQTTDDWSRELGMSRRAFTRMFRQQTGLSFVGWRQQAC 181

Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           L+ AL  L  G +V  VA  LGY++  AF  MFK+  G+ P  Y
Sbjct: 182 LLSALPQLSAGQSVTSVAMELGYENPAAFTIMFKRAFGKPPLAY 225


>UniRef50_D1X8C9 Transcriptional regulator, AraC family n=2 Tax=Streptomyces
           RepID=D1X8C9_9ACTO
          Length = 304

 Score =  221 bits (563), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 73/242 (30%), Positives = 115/242 (47%), Gaps = 3/242 (1%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
           H+              +   H+H   Q++ A  G +T T     W+ P   A+W+P G  
Sbjct: 63  HDPVAPTRTRRLAPGGSIDAHRHDDHQIVYAGRGVLTVTTSAGSWVAPATRAIWVPAGTV 122

Query: 76  HSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134
           H+++     +L  + +  +   +   T   L +SPL REL++         R E    RL
Sbjct: 123 HAHRAYGELDLHLVGLPVTENPLGLETPTVLAVSPLLRELLIAYTRAEDDDRPE--RARL 180

Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
             VL D+L    QQ LHLP  + P +R + +++   P +   L +       S+R L+RL
Sbjct: 181 RAVLLDQLRASAQQPLHLPTPTTPLLRALCDILRADPADSRTLAELGHLVGASDRTLSRL 240

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
              + G++F QWR QL+L  AL  L +   V  VAH  G+ ST+AFI +F++  G TPG 
Sbjct: 241 FRSDLGMTFPQWRTQLRLHHALILLTERTPVTAVAHQCGWSSTSAFIEVFRRTFGHTPGS 300

Query: 255 YI 256
           + 
Sbjct: 301 HR 302


>UniRef50_D0J7G0 Transcriptional regulator, AraC family n=11 Tax=Proteobacteria
           RepID=D0J7G0_COMTE
          Length = 274

 Score =  220 bits (561), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 73/244 (29%), Positives = 123/244 (50%), Gaps = 1/244 (0%)

Query: 21  AFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV 80
            F      +   +P H HR G L  A HG+++  V     + PPQ+ VWIP GV HS  +
Sbjct: 30  YFRYDEFGEHSEAPPHSHRWGHLNYAAHGSLSMDVPTGHILCPPQHGVWIPPGVVHSCYL 89

Query: 81  TANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLF 139
               +   +++ P     +P T   +++ P+ + ++     R           RL +V+ 
Sbjct: 90  QHAVQYRSVYLAPDLCADLPQTAGCMRLGPIVKAVLADFGARGVQIPVTDADLRLARVVH 149

Query: 140 DELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKET 199
           D+L   P +   LPV+ HP +  +++ M   P +  +L +WA    M+ER LAR   +E 
Sbjct: 150 DQLRATPLELSFLPVARHPALVQVLDAMQSRPDDHRSLAEWAETVHMTERTLARHCQREL 209

Query: 200 GLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
           G+S  +WRQ+++ + A+  L  G TVQ++A+ LGY + +AFI MF++  G  P ++    
Sbjct: 210 GMSLGEWRQRMRYLQAIDALEAGHTVQQIAYDLGYSTPSAFIAMFQRESGLPPEQFRREF 269

Query: 260 TTVS 263
              S
Sbjct: 270 CASS 273


>UniRef50_C3JKZ1 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus
           erythropolis RepID=C3JKZ1_RHOER
          Length = 267

 Score =  220 bits (561), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 77/265 (29%), Positives = 120/265 (45%), Gaps = 9/265 (3%)

Query: 6   NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65
           N++  + D      +A              H+HR+ Q + A++GA+    E+  W V P 
Sbjct: 3   NISINDVDHSPRGVLAIGTDY-PPGHVLAAHEHRRAQFLFAVNGAMNVETEDGEWTVLPS 61

Query: 66  YAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRT-- 122
            AV IP GV H+  +        L+IEPSA    P  C  + +S L REL++   +    
Sbjct: 62  NAVMIPAGVAHAVTMDG-VSTRSLYIEPSAAPWFPVRCRVVAVSSLLRELLVAAVDMDVE 120

Query: 123 ----TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALG 178
                   A   +  ++Q++  EL       + LP+  HP +R +       P    +  
Sbjct: 121 LNVEDDSPAHGRSAAVLQLILHELRDLAPLPVELPLPRHPGLRALCAQYLAAPSIHDSPT 180

Query: 179 QWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTT 238
           +WA    +SER L RL++ ETG+S   W Q+  ++ AL  L  G +V  +A  LGY +  
Sbjct: 181 RWADRLHVSERTLHRLLISETGMSASSWMQRACILHALPKLSAGASVTAIASELGYSTPA 240

Query: 239 AFITMFKKGLGQTPGRYIARLTTVS 263
           AF  M  +  G  P  Y AR+TT +
Sbjct: 241 AFAAMCTRVSGAPPSSYRARVTTQT 265


>UniRef50_D1XHM7 Transcriptional regulator, AraC family n=1 Tax=Streptomyces sp.
           ACTE RepID=D1XHM7_9ACTO
          Length = 271

 Score =  219 bits (558), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 119/243 (48%), Gaps = 3/243 (1%)

Query: 29  DELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF 88
            +  +P H+H +G L+    G ++       W+ P    VWIP G EH ++     ++  
Sbjct: 25  HDERTPEHKHTRGHLVYPATGVLSLVTSVGSWIAPSNRVVWIPAGFEHRHRAHGRTDMRI 84

Query: 89  LFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147
           +F+ PS   + P     L ++PL RE  LTL      +R      RL +V+ D++   P+
Sbjct: 85  VFMAPSLAALLPAHPAVLVMTPLAREATLTLT--GAERRPAGARSRLRRVIIDDITTAPE 142

Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207
           Q LHLP     ++R +V ++ +G  +   LG+        ER L+RL  +ETG+SF QWR
Sbjct: 143 QPLHLPEPRDDRLRAVVALVEEGMSDPLTLGRLGHEVGAGERTLSRLFQRETGMSFPQWR 202

Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSA 267
            QL++  AL  L  G +V   A   G+ + +AFI  F   +GQTPG+Y   L     +  
Sbjct: 203 TQLRVHHALLLLADGGSVINTATACGWANPSAFIDAFTALVGQTPGQYRRSLREEVARPG 262

Query: 268 KPD 270
              
Sbjct: 263 DDP 265


>UniRef50_B9JII8 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter
           K84 RepID=B9JII8_AGRRK
          Length = 276

 Score =  218 bits (555), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 71/241 (29%), Positives = 108/241 (44%), Gaps = 1/241 (0%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
            A V           T P H HR+ QL+    G I        WMVPP +A++IP G+EH
Sbjct: 27  NADVLVHSSEPQQGYTVPWHHHRRSQLLCVFAGVILILTTRGRWMVPPGHALFIPAGLEH 86

Query: 77  SNQVTANAELCFLFIEPSAVTMPTT-CCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135
           S ++ ++  +  +++ P            ++++ L R L+L                 ++
Sbjct: 87  SVEMLSDVSMKSVYVMPHDPRQSDEAPRVVEVTDLARSLLLEAIRLREAPVGNRKAELVL 146

Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
            +L +E+    ++ L LP  S  ++  +       P     L  WA   AMS R   R  
Sbjct: 147 SLLLEEISTLEERPLGLPFPSDRRLAALCRAYLANPTPNARLDDWAEKLAMSRRTFTRQF 206

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            KETG+SF  WRQQ  +   L  L +G  V  VA   GY+S  AF TMF++ LG +P  Y
Sbjct: 207 RKETGISFTTWRQQASVFACLPQLAEGQPVTNVALEAGYESAAAFTTMFRRMLGTSPRTY 266

Query: 256 I 256
           +
Sbjct: 267 M 267


>UniRef50_A8AKK6 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC
           BAA-895 RepID=A8AKK6_CITK8
          Length = 251

 Score =  218 bits (555), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 59/239 (24%), Positives = 108/239 (45%), Gaps = 1/239 (0%)

Query: 26  AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85
             + + T+  H H  GQL     G +    E   W + P    W+P  + H   +  +A 
Sbjct: 10  HHSSKHTTQWHHHPGGQLYWITRGMVMVETEQGQWALTPGSVGWLPPSLPHCAWMPVSAY 69

Query: 86  LCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ 144
              L          P++ C    SP    L+  +    T          L+QV+ DE+  
Sbjct: 70  GASLHFSVEYCGVFPSSPCVRAASPFLLLLLEKICGEGTIGEPSERLAHLLQVMVDEIRC 129

Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204
                  L +    ++R + + +        +  + A    +S R L+RL +++TGL+F 
Sbjct: 130 ADALSSQLILPDDRRVRQIAQKILADRACTRSQAELAKQAGLSVRTLSRLFIQQTGLTFG 189

Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVS 263
           QW+Q+ ++I +L+ L++G+ V  VA   GY++ +AFI +F++ +G TPG++  R    +
Sbjct: 190 QWKQKAKVISSLEYLLRGEPVSLVAQLAGYENVSAFIAVFRRFMGMTPGQFYLRFGHGT 248


>UniRef50_Q47UH5 Substrate-binding transcriptional regulator, AraC family n=1
           Tax=Colwellia psychrerythraea 34H RepID=Q47UH5_COLP3
          Length = 272

 Score =  218 bits (555), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 65/248 (26%), Positives = 116/248 (46%), Gaps = 2/248 (0%)

Query: 20  VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79
           V   I           HQH   Q+     G +   V ++ +++P    ++IP    H + 
Sbjct: 21  VTAKIEQMAKGYIDRWHQHPWHQIAFPFEGILQTKVADSQFVIPHSGMLFIPANTPHESF 80

Query: 80  VTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTL-ANRTTTQRAEPMTRRLIQV 137
           V  + +   +++ P      P T   + ++P  REL+L +    + +  +E    +L+ V
Sbjct: 81  VVTDTKFIGIYLNPQFQNHFPLTAKAISVTPFLRELVLHINHGVSNSIVSEEELSKLVAV 140

Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197
           L D++      Q+ L + S  ++  + + +   P     L  WA     SER L+RL  K
Sbjct: 141 LIDQISSGESYQMKLLLPSDRRLMIIFKALMTDPQLNTKLSDWAKQVGASERTLSRLFTK 200

Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           E G++F  WRQ L+L+ +L  L    +VQ++A  +GY++ ++FI  FKK   QTP +Y  
Sbjct: 201 ELGMTFPLWRQHLRLVSSLNLLETNLSVQEIAFKVGYNADSSFIYAFKKLFQQTPQQYRH 260

Query: 258 RLTTVSPQ 265
               +S +
Sbjct: 261 SGFKLSSR 268


>UniRef50_A8GAI3 Transcriptional regulator, AraC family n=2 Tax=Serratia
           RepID=A8GAI3_SERP5
          Length = 257

 Score =  218 bits (555), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 69/232 (29%), Positives = 110/232 (47%), Gaps = 2/232 (0%)

Query: 31  LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLF 90
             +P HQH +GQL L  HG I    +   W +      W+P    H      N     L+
Sbjct: 14  HLTPWHQHTRGQLYLLTHGMIALETQEQQWAMTAGSIGWLPANCAHQALACGNVAGWSLY 73

Query: 91  IEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQ 149
           +  S    +P        S L   L+  LA     QR     RRL+QVL DE+  Q    
Sbjct: 74  LPGSLCADLPKQPHLSTASGLILALVERLAQF-AGQRLNAPQRRLLQVLLDEMCAQESTP 132

Query: 150 LHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQ 209
           L LP+    ++  +   +   P    +  +WA +  +S R L+R  + ETG++F +WRQQ
Sbjct: 133 LQLPLPQDARLLKIARALLNEPASERSQSEWAAWTGLSVRTLSRHFISETGVTFARWRQQ 192

Query: 210 LQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTT 261
            +++ +L+ L +G+ + ++A   GYD+ +A+I  F++  G TPG Y  +  T
Sbjct: 193 ARVLRSLEPLSRGEAINQIAGDCGYDNVSAYIAAFRQRFGTTPGLYFVQRET 244


>UniRef50_B9R0N9 Transcriptional regulator, AraC family protein n=1 Tax=Labrenzia
           alexandrii DFL-11 RepID=B9R0N9_9RHOB
          Length = 279

 Score =  217 bits (554), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 1/252 (0%)

Query: 6   NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65
            L+ +         + +          +  H H   QL   + G+I    E   +  PP+
Sbjct: 23  ELSEFPDHEVRAKIIGYANSQSAGRGHNGWHSHDSAQLFHVVKGSIAIDTEVGTFFAPPE 82

Query: 66  YAVWIPGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTT 124
            AVW+P  + H  +   + E+ F+++       +P T   ++++ L R LIL   +    
Sbjct: 83  RAVWLPPRIAHETRYLTDTEIRFVYVNYDHAQDLPKTAQVIQVTTLLRALILEFMSYPRA 142

Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184
           +  +    R+  V+ D+L   P   L LP+   PK+R + + + + P    AL   A   
Sbjct: 143 ETIDGPAGRIADVILDQLKMLPAAPLQLPMPQDPKLRDLCDGLVRCPAHVPALADAAARS 202

Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244
           AMS R+  R I  ETG+++R W +Q++L  AL+ L  G +V  V+H LGY+  +AF+  F
Sbjct: 203 AMSVRSFERRIKAETGMNYRTWCRQVKLFRALELLAAGRSVSDVSHKLGYEGPSAFVATF 262

Query: 245 KKGLGQTPGRYI 256
           +K  G TPGRY 
Sbjct: 263 RKAFGVTPGRYF 274


>UniRef50_C7JHN7 Transcriptional regulator AraC n=8 Tax=Acetobacter pasteurianus
           RepID=C7JHN7_ACEP3
          Length = 265

 Score =  217 bits (554), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 1/234 (0%)

Query: 30  ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89
             T+  H H  GQ+ +   G +    ++A W++ P+  +W+P  + H  +         L
Sbjct: 32  RRTTVPHVHNNGQIFVVESGVMAVKTQDAYWLIGPEQLLWLPPRLAHEARSHGAITGWSL 91

Query: 90  FIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQ 148
           +I         +       + L    +  L+  T     +  T  L +  +DE    P Q
Sbjct: 92  YIAEDRCAFLVSKPFVADSTRLLSAQVERLSQNTQDTTWDARTACLAESFWDEFLSIPHQ 151

Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208
            L LP     +++ + + +   P +      WA    MS R+  R    +TG+ F  WRQ
Sbjct: 152 SLSLPFPGDVRLKRVADALCANPADSRGQQDWADMAGMSLRSFVRYFTADTGMQFSAWRQ 211

Query: 209 QLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262
           +L+++ A + L +G+ V  VA  +GY+S  AF   FKK  G +P  Y  R  T 
Sbjct: 212 RLRILNAQEKLARGENVTHVAAAVGYESLGAFAAAFKKNTGYSPSTYAQRCMTR 265


>UniRef50_C8QEY4 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b
           RepID=C8QEY4_9ENTR
          Length = 260

 Score =  217 bits (554), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 117/246 (47%), Gaps = 1/246 (0%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           P         +  H     +    H H  GQL    HG +   ++   ++ P QYAVWIP
Sbjct: 8   PHLQEFPGDLYFRHDRLPAMEWKTHAHPWGQLNYVSHGVMHLEIDGIRFLSPSQYAVWIP 67

Query: 72  GGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130
              +H +  + +     ++I       +P+   TL +SP+   ++   A R         
Sbjct: 68  PFADHFSFASRDLVYRTVYISLKLSNRLPSKPTTLNVSPVLHAILDDFALRDVRVPETEE 127

Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190
             R+ QV  D++      + +LP +   ++ ++++ +   P +  ++  +A    M+ R 
Sbjct: 128 DLRMAQVALDQILHIKPHETYLPYAVSDELNSVIKELQLNPGDRRSVEDFAEQLHMTSRT 187

Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250
           L R   +E G+SF +WR +L+ + A++ L  G TVQ++A  LGY + +AFI MFK+  G+
Sbjct: 188 LERRCQRELGISFGEWRSRLKFMHAIESLEAGLTVQRIALELGYTTPSAFIVMFKRFTGK 247

Query: 251 TPGRYI 256
           TP +Y 
Sbjct: 248 TPEQYR 253


>UniRef50_Q0TI30 Transcriptional regulator, AraC family n=14 Tax=Enterobacteriaceae
           RepID=Q0TI30_ECOL5
          Length = 271

 Score =  217 bits (553), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 73/254 (28%), Positives = 116/254 (45%), Gaps = 5/254 (1%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           P       +        +  T P H+H   QL+    G +      ++W+V    A+W+P
Sbjct: 7   PKASPGHHIIGLDSEHLNGGTVPWHKHLYAQLLYPAEGVVRIWAGESVWLVHASSALWLP 66

Query: 72  GGVEHSNQVTANAELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLANRTT----TQR 126
             + H    T N  L  + + E  + T+   C    ISPL REL++ +         T +
Sbjct: 67  PQMPHKFVATGNVLLKTVLVSEAESETLGKVCFMTGISPLLRELLIAINQLPPSQSTTDK 126

Query: 127 AEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAM 186
            +     L  ++  E+    +  L LP  +  +++ + E +         L   A    +
Sbjct: 127 QQLRFSALETLILQEIKMGVKMSLELPWPNDERLQQLCENLLNNQGYLPTLDNLADKINV 186

Query: 187 SERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKK 246
           S R L RL VKETGL+FR W QQ+ +I A+  L  G ++ K+AH LGY S  +F  MFK+
Sbjct: 187 SSRTLMRLFVKETGLTFRHWVQQMHVISAVTLLDDGYSLTKIAHRLGYASAESFGNMFKR 246

Query: 247 GLGQTPGRYIARLT 260
             G +PG++  RLT
Sbjct: 247 RTGYSPGKFTRRLT 260


>UniRef50_Q7VTI7 AraC-family regulatory protein n=3 Tax=Bordetella
           RepID=Q7VTI7_BORPE
          Length = 275

 Score =  216 bits (550), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 13/269 (4%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           M +              AV    +    +     H H + Q +    G +       LW+
Sbjct: 1   MDKPAAEAISVAHARAPAVVTRRNRYPADAHVKPHWHDRAQFLCGSSGVMRVATRRRLWV 60

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA- 119
           VPP  A+WIP    H  ++++  ++  L+I+ + V  MP  C  L ++ L REL++  + 
Sbjct: 61  VPPMRALWIPARTVHEIRMSSAVDMRSLYIDAALVRGMPDDCAVLDMTALMRELVVRAST 120

Query: 120 -----------NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMA 168
                      +  +    +     L  ++  EL + P+  L LP+     +R + E   
Sbjct: 121 DAPSTRDAPQRHEASDGALDEEYGLLSALMVAELRRLPRCGLDLPLPESAALRGLCERAL 180

Query: 169 KGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKV 228
                + +    A    +S R L R  + ETGLSF +W QQ +L+ A++ L  G  V  V
Sbjct: 181 ADLSAFDSAQAQARRLKLSARTLYRRFLDETGLSFARWIQQARLLDAVRRLGDGQAVTDV 240

Query: 229 AHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           A  LGY S +AF  MF + LG +P  +  
Sbjct: 241 ALDLGYQSPSAFTAMFNRALGCSPREWRR 269


>UniRef50_Q7NRZ6 Probable transcriptional regulator AraC family n=1
           Tax=Chromobacterium violaceum RepID=Q7NRZ6_CHRVO
          Length = 247

 Score =  216 bits (550), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 69/239 (28%), Positives = 108/239 (45%), Gaps = 2/239 (0%)

Query: 18  AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77
             +A           +  H H +GQL  A  GA+    +    ++P     WIP G+ H 
Sbjct: 7   PGLAVAALRRGVGDHTARHSHAEGQLAWASAGALELDADGRRILLPGGCVGWIPPGMPHG 66

Query: 78  NQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136
                      L +E + +  +P      + SPL + +   L +       +   RRL+ 
Sbjct: 67  AHYHGELRGWSLQLEAACLPALPPDLRVWRASPLLQGVFQRLGDWPEQAGPDA-ARRLVA 125

Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196
           VL DEL         L   SHP +R + E +++ P     L +WA    MS R+L R   
Sbjct: 126 VLADELAWAEPYPASLAWPSHPALRKLAEALSRDPSLDWDLERWARQIGMSRRSLIRHFR 185

Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            ETG+   +WR++L+++ A   L +G +V   A  LGY  ++AFI  F++  G+TPGRY
Sbjct: 186 AETGMGVAEWRERLRMLRARALLAEGRSVGYCAAELGYAGSSAFIVAFRRCFGETPGRY 244


>UniRef50_A6VY36 Helix-turn-helix-domain containing protein AraC type n=2
           Tax=Gammaproteobacteria RepID=A6VY36_MARMS
          Length = 258

 Score =  215 bits (549), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 121/259 (46%), Gaps = 5/259 (1%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           M+   L  Y  DR     V+  I+   + +    H H   Q++  + G +  T+E+   +
Sbjct: 1   MNANELIQYFSDRQ---VVSKIINLPANGVE-EWHAHPWHQVLYPIAGLLQSTIESKSII 56

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLAN 120
           VP    ++IP    H +      +   +++ P S  +      +  ++P  +ELI+ L  
Sbjct: 57  VPHNGMLFIPANAIHKSVSVTKTQFLAVYLNPKSTESYGNNAKSCLVTPFLKELIVLLVK 116

Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180
           +     AE MT  L+ VL D++      ++ L + +  ++  +   + + P     L +W
Sbjct: 117 QGLDNHAEQMTTNLLCVLRDQIAIAESYEIPLLIPNDRRLMAIFVELNQQPDLALTLSEW 176

Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240
           A     S R L+RL  KE   SF  WRQ ++L+++LQ L K  ++Q +A  LGY S +A+
Sbjct: 177 ATKVGASPRTLSRLCAKEFNQSFAMWRQNIRLVLSLQLLEKNMSIQNIALDLGYQSDSAY 236

Query: 241 ITMFKKGLGQTPGRYIARL 259
           I  FK    QTP +Y  R 
Sbjct: 237 IHAFKGLFAQTPSQYRKRC 255


>UniRef50_B3Q9E6 Transcriptional regulator, AraC family n=2 Tax=Rhodopseudomonas
           palustris RepID=B3Q9E6_RHOPT
          Length = 286

 Score =  215 bits (549), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 76/241 (31%), Positives = 115/241 (47%), Gaps = 1/241 (0%)

Query: 18  AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77
             VA       +E TS  H HR+ Q IL + G      E   ++VPP + +WIP GV H 
Sbjct: 37  RPVAAMTATYPNESTSTRHLHRRDQFILQITGVTAMMTERGHFVVPPGHGLWIPAGVVHQ 96

Query: 78  NQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQ 136
           ++     E   +++ P+       TC  ++ S L   L+                  LI+
Sbjct: 97  SRAWGEVEAQTIYVTPNRERKASDTCRLIRASSLIEALMDEAVRIPEIYDQNGRDGTLIE 156

Query: 137 VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIV 196
           +L  E+ + P+  LH+ +   P++  + + +   P     L  WA    +S R L RL  
Sbjct: 157 LLLTEIARMPEVTLHVQMPPDPRLAEICKAVLGDPSSNLTLDHWADKCGLSRRTLTRLFR 216

Query: 197 KETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           +ETG SF  WRQ+++L+ AL  L  G+TV  VA  +GYDS +AF  MFK+ LG  P  Y+
Sbjct: 217 RETGQSFSGWRQRVRLLEALARLGAGETVTGVALDVGYDSPSAFAAMFKRELGSAPRHYL 276

Query: 257 A 257
            
Sbjct: 277 R 277


>UniRef50_Q13M62 Transcriptional regulator, AraC family n=4 Tax=Burkholderia
           RepID=Q13M62_BURXL
          Length = 266

 Score =  215 bits (548), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 83/257 (32%), Positives = 121/257 (47%), Gaps = 7/257 (2%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           MM  +     +PD   + A     H  T  L  P+   R+ +LI A  G +    E   W
Sbjct: 17  MMDTV-----DPDGVEQPAFVIGEHHET--LDEPLGAFRRARLIHASAGVLIVRTETGRW 69

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120
           +VPP +A+WIP GV H    T     C L+    AV +P     +    L   L+   A+
Sbjct: 70  VVPPGHALWIPAGVLHRLSATGPVRFCSLYAGADAVPLPFHSIAVVPDRLVAALLSAAAD 129

Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180
               +  +    RL+QVL D LP  P   L L     P+   + + ++  P +   L   
Sbjct: 130 LPHDKPFDEPAARLVQVLLDRLPGLPVAPLGLNWPRDPRALRIADALSSNPADSAVLEDL 189

Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240
           A    ++ R  ARL VKETG +F QWRQQL+L+ A++ L  G +V +VA  +GY   ++F
Sbjct: 190 AAAAGVTARTAARLFVKETGQTFGQWRQQLRLLAAVEHLGAGASVTQVAPEVGYSDVSSF 249

Query: 241 ITMFKKGLGQTPGRYIA 257
           I +F+   G TP RY  
Sbjct: 250 IAVFRDAFGDTPARYFR 266


>UniRef50_A1BBK0 Transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria
           RepID=A1BBK0_PARDP
          Length = 262

 Score =  214 bits (547), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 83/246 (33%), Positives = 109/246 (44%), Gaps = 2/246 (0%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
             D      VA   +   D      HQHR+ QLI A  G I      A W+VPP   VWI
Sbjct: 8   RIDHAPRPIVAIG-NDYPDGFVIQPHQHRRAQLISAATGVIVLATPEATWVVPPNRGVWI 66

Query: 71  PGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEP 129
           P    H  ++  +  +  L+IEP AV  MP+ C  L IS L R LI    N         
Sbjct: 67  PPATRHHVRIVGDVGMQSLYIEPGAVPGMPSHCQVLGISALMRSLIAEALNLPLEYDQHG 126

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
               L++++  E+   P   L LP  S P++       A+ P        W+    MS R
Sbjct: 127 RDGVLMELIRLEMGGLPALPLSLPFPSDPQLSRRCRAFAEKPAIHETTDDWSRALGMSRR 186

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
           +  R   +ETG SF  WRQQ  L+ A+  L  G+ V  VA  LGY++  AF  MFK+  G
Sbjct: 187 SFTRFFRRETGASFMAWRQQACLLYAMPRLAAGEAVTTVAMDLGYENPAAFTIMFKRTFG 246

Query: 250 QTPGRY 255
             P  Y
Sbjct: 247 SPPLAY 252


>UniRef50_D1VDY4 Transcriptional regulator, AraC family n=1 Tax=Frankia sp. EuI1c
           RepID=D1VDY4_9ACTO
          Length = 322

 Score =  214 bits (546), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 60/261 (22%), Positives = 110/261 (42%), Gaps = 6/261 (2%)

Query: 18  AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77
            A+        + L +P H H   Q+  A+ G +        +++PPQ A W+P G+ H 
Sbjct: 58  DALGGGYMYEGERLVTPWHSHDLHQIEYAMSGVVEVETAGGRYLLPPQQAAWLPAGLSHQ 117

Query: 78  NQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQ-RAEPMTRRLI 135
             +        +  +P  V  P      + +SPL RE+IL        +  ++ ++    
Sbjct: 118 ATMNTAVRTVSVMFDPRIVPRPGDRARIVAVSPLIREMILYALRWPIARTESDDVSDGFF 177

Query: 136 QVLFDELPQQ--PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193
           + L   + +    +  L LP S+ P +   +    +           +    +SER L R
Sbjct: 178 RTLAHLVAEAIDHEAPLSLPTSADPLVAAAMAHTRENLG-TVTAATVSRAIGVSERTLRR 236

Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252
               E G+S+R +  Q +L+ A+  L + G +V  V+  +G+++ +AF   F   +G+TP
Sbjct: 237 QFAAELGMSWRAYLLQARLLRAMALLAEPGPSVLDVSLAVGFENVSAFARAFALRVGETP 296

Query: 253 GRYIARLTTVSPQSAKPDPRQ 273
             Y  R+         P PR+
Sbjct: 297 SAYRRRVAADPKPIGGPAPRE 317


>UniRef50_UPI0001B55F3C AraC family transcriptional regulator n=3 Tax=Streptomyces
           RepID=UPI0001B55F3C
          Length = 271

 Score =  214 bits (546), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 101/230 (43%), Gaps = 4/230 (1%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
                   H+H   QL  A  G +T  +    W++PP  A+WIP G  H+   T  A + 
Sbjct: 35  PGGRRFERHEHSAHQLAWAAAGTLTVDIGAHSWVLPPTLALWIPAGTPHTTSATRPALMR 94

Query: 88  FLFIEPSAVTMPT-TCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146
            +++ P    +       + + PL RELI  LA+             L+    D L    
Sbjct: 95  SVYLLPRHSPVRRPGPTVVTVGPLLRELITHLADTPLEPGPRARAEALLP---DLLRPVE 151

Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206
              + +P+    +   + E +   P +  +L +W      S R LARL   ETGLSF +W
Sbjct: 152 VTTIEVPMPRDERALRVAEALVAHPADPRSLDEWGRLVGASARTLARLFSAETGLSFGRW 211

Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           R + +L   L+ +     +  VAH +GY S ++F+  F+   G+TPG Y 
Sbjct: 212 RTRARLRAGLEHMAVNRPLTAVAHRVGYTSPSSFVAAFRHETGRTPGAYF 261


>UniRef50_C4WMA6 AraC family transcriptional regulator n=1 Tax=Ochrobactrum
           intermedium LMG 3301 RepID=C4WMA6_9RHIZ
          Length = 249

 Score =  214 bits (545), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 84/242 (34%), Positives = 123/242 (50%), Gaps = 2/242 (0%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
             A     I         P H+HR  QLI A  G +T   EN  W+VPP  AVW+P  VE
Sbjct: 8   PLALAISTIAQDDASFAGPPHRHRDAQLIYARSGVVTVATENGSWVVPPNRAVWVPPMVE 67

Query: 76  HSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134
           H+ +     +   +FI P A   +P++C  +++S L RELIL L      + A P   R+
Sbjct: 68  HATRSHGPVQFRTIFIHPDAARSLPSSCGVVEVSSLLRELILRLVELQ-DRPATPFAHRV 126

Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
            ++L +EL   P + L L + S  ++RT+ + +   P    +L   A    MS R+  R 
Sbjct: 127 CELLLEELTFLPAEPLSLSMPSDHRLRTLCQTLQAEPDTELSLDAAASRTGMSRRSFMRH 186

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
             +ETG+++ +WRQQ +L+ AL  L  G  V  VA   GY S +AF   FK+ LG++P  
Sbjct: 187 FERETGMTYGRWRQQARLLAALPALAAGVPVVTVALDCGYQSASAFAATFKRSLGRSPAS 246

Query: 255 YI 256
           Y 
Sbjct: 247 YF 248


>UniRef50_C8QCP4 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b
           RepID=C8QCP4_9ENTR
          Length = 259

 Score =  213 bits (544), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 1/226 (0%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
            H H  GQ+I      +   VE    + P    +WIP G  HS+     +      +   
Sbjct: 33  PHAHAWGQVIFVKSHVLEMEVEGERLLTPADMPIWIPPGHRHSSYNHRQSLFRTFNLATD 92

Query: 95  AVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP 153
               +P   C L +  +   ++   A R   Q       RL +VL D L   P Q+ +LP
Sbjct: 93  LCDGLPQQACLLNVDTIVHAIMDEFARRGLEQPLSDADWRLCEVLGDRLRLAPVQKSYLP 152

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
            S+   +  ++  +   P +   L QWA     +ER LAR   ++  +SF +WRQ+L+ +
Sbjct: 153 GSNDKLLAPILHALQVHPGDNTTLAQWAKRVFTTERTLARRCQQQLNMSFSEWRQRLRFL 212

Query: 214 MALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
            A+  L +G +VQ +AH LGY S +A I MF+   G TP RY +RL
Sbjct: 213 RAITLLEQGISVQAIAHELGYSSASALIVMFQHQAGTTPDRYRSRL 258


>UniRef50_B4SMW0 Transcriptional regulator, AraC family n=3 Tax=Stenotrophomonas
           RepID=B4SMW0_STRM5
          Length = 265

 Score =  213 bits (544), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 66/250 (26%), Positives = 118/250 (47%), Gaps = 2/250 (0%)

Query: 7   LNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQY 66
           L+    D      V            +  HQH +GQL+ A  G +    ++  W++P  +
Sbjct: 10  LDPALADAADGPVVLAARLRQHGMRRTARHQHARGQLLGAQQGLLRIAADDLHWLLPAGH 69

Query: 67  AVWIPGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQ 125
             WIP  + H+       +   L+    A   +P+T    + + L +   +        +
Sbjct: 70  VAWIPPLLPHALLSADGFDGWSLYFNAEACLGLPSTPRIFQPNALLQAATIRALRWP-HR 128

Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185
             +    RL  V+ DE+       L LP     +++ +   +A+ P +  ++  WA    
Sbjct: 129 PLDAAQARLAGVIADEIAASTPLPLALPQPRDRRLQKIAAALARAPHDNRSIEDWATRSG 188

Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245
           +S R+LAR  + ET ++  QWRQ+L++++AL  L+ G+ V  VA ++GYD+ +AFI +FK
Sbjct: 189 LSSRSLARHWLAETHMTLSQWRQRLRVLLALPRLLSGEPVISVALSMGYDTPSAFIAVFK 248

Query: 246 KGLGQTPGRY 255
           + +G TP RY
Sbjct: 249 REMGVTPARY 258


>UniRef50_B0T088 Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. K31
           RepID=B0T088_CAUSK
          Length = 249

 Score =  213 bits (542), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 80/246 (32%), Positives = 111/246 (45%), Gaps = 4/246 (1%)

Query: 13  DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72
           D     ++A              H H  GQL+ A  G +    + A W+VPP  A+WIP 
Sbjct: 6   DGFDVRSLALTFR---PGAVLGKHAHVWGQLVFASAGVMRVATDAATWLVPPTKAIWIPA 62

Query: 73  GVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131
           G+ H       A +  L+I P     +PT    L+++PL RELIL +          P  
Sbjct: 63  GLTHQILFGGEAAMRTLYIAPGRAATLPTEPQALEVAPLLRELILHILKIGMLTPQRPEH 122

Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191
            RL  +L D + Q   Q L LP+    +   +   +   P E   L   AG F  S R L
Sbjct: 123 DRLAGLLIDLMRQARSQDLCLPLPRDRRALALAIHLQARPDEERGLAALAGPFGASLRTL 182

Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251
            R+  +ETGL+   WRQ+ +LI ++  L  G +V   A   GY S  AFI  F +    T
Sbjct: 183 QRVFPRETGLTLETWRQKARLIHSVACLTTGASVTDAALASGYRSVGAFIGAFTRQFEVT 242

Query: 252 PGRYIA 257
           PGRY+A
Sbjct: 243 PGRYLA 248


>UniRef50_A1VPE7 Transcriptional regulator, AraC family n=2 Tax=Comamonadaceae
           RepID=A1VPE7_POLNA
          Length = 280

 Score =  213 bits (542), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 81/270 (30%), Positives = 120/270 (44%), Gaps = 17/270 (6%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENAL- 59
           ++   + + + P    +  V     +   +     H H   QL     G +  T E    
Sbjct: 9   LISLGDTDPFTP--SPQRPVRVRSRSMAADTHLEPHTHAWAQLAYCATGVVQVTAEQTRP 66

Query: 60  ---------WMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA-VTMPTTCCTLKISP 109
                     ++PP  AVWI  G  H   V   AEL  L+++ SA       C  L +SP
Sbjct: 67  DQAQADEITCIIPPSRAVWIAPGARHHITVREAAELRTLYLDASATPPGWQGCRVLVVSP 126

Query: 110 LCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSS----HPKIRTMVE 165
           L REL+ +L + +     E  T+ L  ++ DE+     Q L +P+        ++R + E
Sbjct: 127 LLRELVHSLDDGSGQPLTEARTQWLSALVLDEITHADIQALGVPMPHPDSGDKRLRALCE 186

Query: 166 MMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTV 225
            + + P E   L  WA     SER +ARL   + GLS++QWRQQ  L  AL  L +G  V
Sbjct: 187 AVLRAPSERATLAGWAADIGASERTVARLFRDQLGLSYQQWRQQAILAHALPMLARGQPV 246

Query: 226 QKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
             VA   GY S +AF  MFK  +GQ P ++
Sbjct: 247 GAVAAASGYASESAFSAMFKAAMGQPPSQF 276


>UniRef50_A8T3D4 AraC-type DNA-binding domain-containing protein n=5 Tax=Vibrionales
           RepID=A8T3D4_9VIBR
          Length = 266

 Score =  212 bits (541), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 2/237 (0%)

Query: 20  VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79
           +   + A   +  S VH H K QLI + HG +T T+E+  +++PP  A WIP G  H+ Q
Sbjct: 18  LVIGVAAEISDHDSGVHFHAKDQLISSQHGCMTITLEDVKYVLPPMRAAWIPRGTSHNAQ 77

Query: 80  VTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVL 138
            T  A+   L+ +PS    +P       ++PL R LI  ++     +        L  + 
Sbjct: 78  STNVAQYRSLYFDPSLASRLPRKIRIFDVTPLMRILIDRMSFWPFDKPESEQINTL-NLF 136

Query: 139 FDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKE 198
            +EL       L LP+    ++++ +  +        +L + +     SE+ + R+  +E
Sbjct: 137 IEELNDSEDVYLQLPLPKDYRLQSWISKIDDEAFSAPSLAKLSQLVGASEKTITRIFNRE 196

Query: 199 TGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           TG+ ++ WRQQ +L+ A++ L  G  +  +AH L + S +AFI  F++  G TP  Y
Sbjct: 197 TGMPYQSWRQQWRLLGAIELLSSGMRLSDIAHRLEFSSDSAFIYFFRQKTGTTPMSY 253


>UniRef50_Q13VV8 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria
           RepID=Q13VV8_BURXL
          Length = 268

 Score =  211 bits (539), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 2/240 (0%)

Query: 20  VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79
           V F  ++         H+H   Q + A +G +          +PP Y VWIP G  H+  
Sbjct: 25  VYFRAYSLKGGTCVQGHEHVWWQFLFARNGLMQVQAGATTLTLPPDYGVWIPPGCVHTLW 84

Query: 80  VTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA-NRTTTQRAEPMTRRLIQV 137
           +    EL  L+IEP+AV         + +    R  I     +       +    R ++V
Sbjct: 85  IGEEVELESLYIEPTAVAIQDQEPRVVMVDEFVRAFIHHGCTSIPVKYDEDGADGRKVKV 144

Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197
           L D L   P    +LP  + P++  +   +   P     L + AG   MS R   R  ++
Sbjct: 145 LLDSLQSLPDAPFNLPFPTEPRLLEVCLTIQSAPHLAHTLDESAGLARMSSRTFTRHFLR 204

Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
            TGL +  WRQ+++L+ +L+ L    TV +VA T+GY + +AF   FK+  G++P R+  
Sbjct: 205 ATGLPYHTWRQRMRLLGSLEMLRSDITVTEVALTIGYSTPSAFTHAFKQLFGKSPSRFTR 264


>UniRef50_B1LVX0 Transcriptional regulator, AraC family n=3 Tax=Rhizobiales
           RepID=B1LVX0_METRJ
          Length = 272

 Score =  211 bits (539), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 64/234 (27%), Positives = 102/234 (43%), Gaps = 1/234 (0%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
              VA         +    H H + QL+ A  G +    ++  W+VP  +A+WIP  + H
Sbjct: 28  PRPVAVMPKTYAAGMHLDRHFHPRAQLLYATSGLMMAFADDGTWVVPEGHALWIPPRLPH 87

Query: 77  SNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLI 135
           +        +C  +++P+AV   P +C  + +S L    +  LA        +     L 
Sbjct: 88  AVATHGAVSMCSAYLDPAAVRSFPASCRVIAVSRLMASALTALAEEPVLYAVDGRGGHLA 147

Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
            ++ DE+ + P   L LP+   P++R +   + + P     L  WA     S R L R  
Sbjct: 148 ALVLDEIGRAPATPLALPLPRDPRLRRVCLALIEDPASEADLDAWADRAGASRRTLTRGF 207

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
             ETGLSF  WR + ++I AL    +G   + VA  +GY S  A  T   + LG
Sbjct: 208 RAETGLSFGDWRARARVIRALALAAEGRPPRAVAAAVGYRSAQALRTTVARVLG 261


>UniRef50_B4EHM1 AraC family regulatory protein n=5 Tax=Burkholderia cenocepacia
           RepID=B4EHM1_BURCJ
          Length = 271

 Score =  211 bits (538), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 77/232 (33%), Positives = 116/232 (50%), Gaps = 6/232 (2%)

Query: 26  AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85
           A         H H+ GQL+    G +   VE   W+ PP  A+WIP    H+ +V  + +
Sbjct: 35  ARALAHEYAPHAHQAGQLLFTTRGVLVLDVEGQRWITPPLRAIWIPARTVHAMRVADDVQ 94

Query: 86  LCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLAN-RTTTQRAEPMTRRLIQVLFDELP 143
           LC L++ +     +P T C + +SPL REL   +++    +   +P    L ++  DEL 
Sbjct: 95  LCSLYLGDALGARLPATLCAMTVSPLLRELATRVSHPFDCSVDHDP----LARLFADELS 150

Query: 144 QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203
           +  Q  L LP+    ++  + E + + P     L   A   A+S R+LARL   ETG+S 
Sbjct: 151 ELAQTPLTLPLPRDRRLLKLCERLQREPHCELPLDTLARDAALSARHLARLFRSETGMSV 210

Query: 204 RQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
             WRQQL+L M+L  L  G  V + AH +GY S T +   FK+  G TP +Y
Sbjct: 211 AAWRQQLRLSMSLALLASGMPVTQAAHQVGYRSPTTYAATFKRAFGVTPSQY 262


>UniRef50_C6DFV4 Transcriptional regulator, AraC family n=1 Tax=Pectobacterium
           carotovorum subsp. carotovorum PC1 RepID=C6DFV4_PECCP
          Length = 273

 Score =  211 bits (538), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 59/248 (23%), Positives = 118/248 (47%), Gaps = 9/248 (3%)

Query: 14  RHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGG 73
             + +       +      +P H+H++GQL+ A+ G +    ++  W++PPQ ++W+P  
Sbjct: 20  EMNNSDWGCLARSYERGELNPSHKHKRGQLLYAVKGVMLVQTDSRQWVIPPQRSLWLPAE 79

Query: 74  VEHSNQVTANAELCFLFIEPSAVTM------PTTCCTLKISPLCRELILTLANRTTTQRA 127
             HS  + ++ EL  L+  PS V              + ++P  + LI +L  ++     
Sbjct: 80  QWHSFTLLSHTELRTLYFTPSFVAETCGMKTLDHIHVIGMTPFAQHLISSLFEQSFNH-- 137

Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187
               + + Q+L   + +     + L +    K+  + + +        +L ++A   AMS
Sbjct: 138 -STQKLIAQLLLRIVNETEALPVDLAMPCDDKLHRVAQDILVNNRWNVSLSEFAELVAMS 196

Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247
           ER  +R   ++TG SFR W+Q+ ++ +++  L  G  V+ VA+ LG+   ++FI  F+  
Sbjct: 197 ERTFSRYFTEDTGCSFRTWKQRARIFVSMDLLSNGMPVKNVAYKLGFSCPSSFIAAFRTV 256

Query: 248 LGQTPGRY 255
            GQTP  +
Sbjct: 257 TGQTPSCF 264


>UniRef50_C9PF82 Substrate-binding transcriptional regulator AraC family protein n=1
           Tax=Vibrio furnissii CIP 102972 RepID=C9PF82_VIBFU
          Length = 274

 Score =  211 bits (537), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 2/247 (0%)

Query: 14  RHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGG 73
             H+A +   IH          H H   Q+I  L G +  ++EN   +VP    ++IP  
Sbjct: 10  SPHQAFITKTIHMRA-GYIDDFHTHPWHQIIFPLSGLLQSSIENRSVIVPHNAMLYIPAD 68

Query: 74  VEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTR 132
             H +    + +   +++ P S V       +  ++P  + LIL L NR+T  +      
Sbjct: 69  TVHKSVSVTDTQFLAMYLNPKSGVNYGVEAKSCLVTPFLKALILLLFNRSTQAQPPENLI 128

Query: 133 RLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLA 192
            L+ VL D++    Q  + L +    +++ + E +   P    +L +WA     SER L+
Sbjct: 129 HLLTVLRDQIDTAGQYAIPLLIPRDKRLKAIFEQLTAQPDVKFSLNEWAKHVGASERTLS 188

Query: 193 RLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252
           RL  KE   SF  WRQ ++L+++LQ L    T+Q +A  LGY S +A+I  FKK    TP
Sbjct: 189 RLCAKEFDQSFSLWRQNVRLVLSLQLLSTPRTIQDIALELGYASDSAYIYAFKKLFHHTP 248

Query: 253 GRYIARL 259
            +Y   L
Sbjct: 249 SKYRHSL 255


>UniRef50_C4WPU9 AraC family transcriptional regulator n=1 Tax=Ochrobactrum
           intermedium LMG 3301 RepID=C4WPU9_9RHIZ
          Length = 260

 Score =  210 bits (536), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 2/238 (0%)

Query: 10  YEPDRHHEA-AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAV 68
           +  D  +    +A         +    H HR+GQL+    G +T   E   +M+P  YAV
Sbjct: 18  HAIDYQNLPRPLAVMRREYKTGMNFGWHSHRRGQLLYGNTGYMTALTEEGAFMLPSGYAV 77

Query: 69  WIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLANRTTTQRA 127
            +   + H+ +     E+  +++E + +  +      LK+S L    I  LA        
Sbjct: 78  LLRPDLPHAVETFGETEMYSVYVEENISRDLWEETRVLKVSALLDASIQALAKEPLLYDE 137

Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187
               R L  ++ DE+    +Q L +P+ +  ++R +   +   P     +  WA    MS
Sbjct: 138 NGRGRHLSALILDEIRCAGRQPLTVPLPTEKQLRKLCRNLLGNPGLDLTIDDWAEEVGMS 197

Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245
            R + R   +ETG+SF +WRQ+L+    ++   +G  +   +   GY S +    + K
Sbjct: 198 RRTMTRKFRQETGMSFIEWRQRLRASHVMRRQAEGVPLAMASVEAGYQSVSTLRKVMK 255


>UniRef50_A8G994 Transcriptional regulator, AraC family n=12 Tax=Gammaproteobacteria
           RepID=A8G994_SERP5
          Length = 255

 Score =  210 bits (535), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 71/251 (28%), Positives = 122/251 (48%), Gaps = 9/251 (3%)

Query: 8   NGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYA 67
           + ++PD  + +     I A   +  S  H H  GQL+ +  G +  T+  ++ ++PP   
Sbjct: 8   DEFDPDAINNSV--LGIAAELAQHDSGPHWHNMGQLLFSQRGCMRITLNESICLLPPARI 65

Query: 68  VWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQR 126
            WIP  V H  QVT  A    ++++      +      L  S L RE++  +A    T +
Sbjct: 66  AWIPPLVVHRVQVTGVAGYRSVYLDNHRYPGLSPHLEVLSASSLLREVLERIALADFTTQ 125

Query: 127 AE-PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185
            E   +  ++ V  DE+    ++   LP+    ++R +  M    P     L + A +  
Sbjct: 126 WESGPSANILAVCLDEIRHAQRELTLLPLPKDRRLRQLAGMEEVPP-----LNELARYSG 180

Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245
            SE+ ++R+  KETGLS++QWRQQ +LI A++ L +G  +  +A  L + S +AF T FK
Sbjct: 181 ASEKTISRIFRKETGLSYQQWRQQWRLIKAIELLAEGYGLSDIAGKLEFSSDSAFSTFFK 240

Query: 246 KGLGQTPGRYI 256
              G +P  Y+
Sbjct: 241 NMTGSSPRAYM 251


>UniRef50_C7I316 Transcriptional regulator, AraC family n=1 Tax=Thiomonas intermedia
           K12 RepID=C7I316_THIIN
          Length = 291

 Score =  209 bits (534), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 74/244 (30%), Positives = 111/244 (45%), Gaps = 6/244 (2%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H +G L L   G +         + P Q   W+P GVEH+ Q          F+ P  
Sbjct: 46  HCHARGTLFLLTEGLVIVETAQGRQLSPSQTIGWMPPGVEHAVQSYGPTAGFGAFLTPQF 105

Query: 96  V-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 154
              +P    +  ++PL   ++    +       +    RL+ VL DEL Q P + L LP 
Sbjct: 106 CGDLPAEPTSYPVNPLVALVLQKALSWPHDTPLDLTRMRLLLVLLDELRQSPARPLQLPW 165

Query: 155 SSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
               ++ ++   +         L QWA +  +S R+L+R  V ETG+SF QWRQ  +L  
Sbjct: 166 PQDARLLSIARALLGNIASPRTLEQWARWADISARSLSRKFVLETGMSFAQWRQWARLTQ 225

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY-----IARLTTVSPQSAKP 269
           AL+ L  G  V+ VA +LGYDS +AFI  F++ LG TP  Y       +       +A  
Sbjct: 226 ALEWLATGRAVKDVALSLGYDSVSAFIKTFRQALGTTPSAYFQTQQRKQAALNPRVAADQ 285

Query: 270 DPRQ 273
           + +Q
Sbjct: 286 EAQQ 289


>UniRef50_C1A6S8 AraC family transcriptional regulator n=1 Tax=Gemmatimonas
           aurantiaca T-27 RepID=C1A6S8_GEMAT
          Length = 286

 Score =  209 bits (533), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 77/264 (29%), Positives = 122/264 (46%), Gaps = 11/264 (4%)

Query: 13  DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72
           D    +++ F       E  S       GQLI A  GAI+  V  +LW+VP +  +W+P 
Sbjct: 17  DLVRTSSIGFHGEYLWRERYS-----DWGQLIWASRGAISVMVGQSLWLVPARSGLWLPP 71

Query: 73  GVEHSNQVTANAELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131
              H  ++     L  +FI    A  +P T     ++PL RE++  +  R T   A+P  
Sbjct: 72  ATTHDVRMIGRGVLRLVFIARARARALPKTPAVRALTPLLREILRRVLARDTLTTADPRD 131

Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191
            RL+ VL DEL +       LP+ + P+      ++ + P +       A     S R L
Sbjct: 132 GRLLGVLVDELSEVSPAPFDLPMPTDPRAIRAAALVREHPAQPPDAITIARHAGASVRTL 191

Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251
            R+   ETGL+F  WR + +L+ A+  L  G++V +     G+  T+AF+  F++  G T
Sbjct: 192 ERVFRAETGLAFGAWRLRARLMHAMILLANGESVTRTGIAAGFAGTSAFVHAFRRTTGTT 251

Query: 252 PGRY-----IARLTTVSPQSAKPD 270
           PG Y      +R + VS Q+  P 
Sbjct: 252 PGAYATPGVRSRTSPVSSQTGVPS 275


>UniRef50_Q2L001 AraC-family transcriptional regulator n=4 Tax=Bordetella
           RepID=Q2L001_BORA1
          Length = 258

 Score =  209 bits (532), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 1/256 (0%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           M+ +   + +      E  VA            P H HR+ QL+ A+ G +        W
Sbjct: 1   MLAQPAHDIHLAFERTEHPVAVLAADYPQGARIPRHCHRRAQLLYAVEGVMIVEARAGRW 60

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLA 119
           +VPP   VW+  G+EH  +++   ++  +F+EP AV  +P   C +++ PL RELIL  A
Sbjct: 61  VVPPTRGVWLDAGLEHRVRMSGRVKMRTVFVEPDAVAHLPQGGCVVEVPPLLRELILAAA 120

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
               +         L+++L  EL   P+  L+LP     ++R + + +++   +      
Sbjct: 121 LLPLSYEDTGRDGLLMRLLLAELAAIPRLPLYLPWPQDKRLRALCDALSRDLAQVHEAAY 180

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
           WA    +S R L R  ++ETG++F +WRQ  +L+ AL+ L  G+ +  +A   GY S +A
Sbjct: 181 WAEQMQVSTRTLHRAFLRETGMTFGRWRQHARLLSALERLAHGEKILSIALDHGYTSQSA 240

Query: 240 FITMFKKGLGQTPGRY 255
           F  MFK+  G  P  +
Sbjct: 241 FSAMFKQHFGVPPSAF 256


>UniRef50_A9BNM6 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria
           RepID=A9BNM6_DELAS
          Length = 310

 Score =  208 bits (531), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 115/256 (44%), Gaps = 16/256 (6%)

Query: 19  AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78
            V          L    H H   QL+ A+ G +     +  W+VPP   VW+  GV H  
Sbjct: 51  PVTGVAADYPAGLEVEEHSHECCQLLYAVQGVLEVRAGSGRWVVPPTRGVWLRSGVPHGL 110

Query: 79  QVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137
           ++    ++  LF++  +A  +P T C +++SPL RELI  +A    +         ++++
Sbjct: 111 RMRGAVQVRSLFVDAQAAADLPGTDCVIEVSPLLRELISEVARWPASAPPGRRESMVVEL 170

Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAK---------------GPVEWGALGQWAG 182
           L  EL Q P    HLP     ++  +   +A+                         WA 
Sbjct: 171 LLQELRQPPVVPFHLPWPQDARMAAVCHALAEGEGADGFATAAAAADIGAATATAADWAA 230

Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242
             AM E+   R  ++ TG+SF +WRQ+ +L+ ++Q L+ G  + +VA   GY+S +A+  
Sbjct: 231 RLAMGEKTFHRHFLQATGMSFGRWRQRARLLSSMQALLAGRPIVQVALEAGYESHSAYSL 290

Query: 243 MFKKGLGQTPGRYIAR 258
            F++  G  P  + AR
Sbjct: 291 AFRRQFGMPPSAFGAR 306


>UniRef50_B5GYF3 AraC-family transcriptional regulator n=4 Tax=Actinomycetales
           RepID=B5GYF3_STRCL
          Length = 283

 Score =  208 bits (531), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 70/254 (27%), Positives = 111/254 (43%), Gaps = 5/254 (1%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
           EP     AA+             P H HR  +L+    G +T  + + ++ V   Y +W+
Sbjct: 6   EPLPESAAAILAGSRIVPAPTEWPPHAHRLHELVWVRGGTLTSRMGDRVYTVVEGYGLWM 65

Query: 71  PGGVEHSNQVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEP 129
           P G+ H  + TA AEL   F  P  +    T    + ++PL   L+  L+       A  
Sbjct: 66  PAGMVHEGRATAQAELFHAFFAPDRIPFAFTEPMAITMTPLLESLLTHLSCADIDGEARA 125

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
                  V+FD +    +Q   L +   P+I  + E +   P +  +L +WA     S+R
Sbjct: 126 RAES---VVFDVIRPSERQ-FALRLPGDPRIDAIAEALLDDPSDGRSLEEWARLLGTSDR 181

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
            + R   + TGL F QWRQ L++  AL  L +   V  V+  LGY   ++FI  F++ +G
Sbjct: 182 TITRAFRQATGLPFAQWRQMLRVHRALMLLAEDIDVTTVSEVLGYAQPSSFIVAFRRVMG 241

Query: 250 QTPGRYIARLTTVS 263
            TPG +       S
Sbjct: 242 ITPGAFSDAAAGPS 255


>UniRef50_Q5FU43 Transcriptional regulator, AraC family n=1 Tax=Gluconobacter
           oxydans RepID=Q5FU43_GLUOX
          Length = 259

 Score =  208 bits (530), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 1/234 (0%)

Query: 30  ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89
              +  H H +GQ+     G +    E+A W++ P   +W+P  + H  +         L
Sbjct: 26  RRIAERHAHARGQIFGIESGVMAIRTEHAYWLIGPGQCLWLPPHIPHEARSHGAVAGWSL 85

Query: 90  FIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQ 148
           ++  +  + +P        + L   L   L++     R +     L +  + E    P+ 
Sbjct: 86  YVSAARCSNLPDEPFLAGGTRLLTALADRLSHDADETRWDAQISCLAECFWHEFLAAPRA 145

Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208
            + LP     +   +   ++  P +      WA   AMS R+  R    ETGL F  WRQ
Sbjct: 146 SVSLPFPKSEQFCRVANTLSDNPADNRDQKDWAELAAMSLRSFVRHFTLETGLPFSVWRQ 205

Query: 209 QLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262
           +L+++ A + L +G++V  VA  +GY+S  AF T F K  G  P  Y     T 
Sbjct: 206 RLRILNAQEKLARGESVASVALDVGYESLGAFATAFHKNTGYRPSDYARLCRTP 259


>UniRef50_Q8EHW8 Transcriptional regulator, AraC/XylS family n=3
           Tax=Gammaproteobacteria RepID=Q8EHW8_SHEON
          Length = 259

 Score =  208 bits (529), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 76/258 (29%), Positives = 124/258 (48%), Gaps = 1/258 (0%)

Query: 4   RLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63
           R   +    D+   A + F   A      +P H+H  GQL L   G +        ++ P
Sbjct: 2   RPVYHPLSSDQLPVADIFFNYEAFLPNTITPKHRHNWGQLQLISGGIMELHASGQRFLSP 61

Query: 64  PQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRT 122
            QYA+W+P GVEH +    +   C L I  +     P   C L ++P+ + ++  L  R 
Sbjct: 62  SQYAIWVPAGVEHESYTRRSIHYCSLNIVANRAQVFPDVTCLLAVTPIAQAIVNDLRQRQ 121

Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182
                    +RL++VL D+L     Q   LP S+   ++ +++ +   P    +L  WA 
Sbjct: 122 VRVAQTDADKRLVEVLIDQLILGQAQPQFLPSSTDKLLQPILQQLELEPASQKSLKSWAS 181

Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFIT 242
               +ER LAR      G+SF + RQ+ + I +LQ L +G ++++VA TLGY+ T+ +I 
Sbjct: 182 ELHTTERTLARRCQNCLGMSFTELRQRHKFIYSLQLLREGLSIKEVALTLGYNQTSPYIV 241

Query: 243 MFKKGLGQTPGRYIARLT 260
           MFKK    +P +Y  +L 
Sbjct: 242 MFKKYAQYSPEQYRRQLA 259


>UniRef50_C0YRY4 AraC family transcriptional regulator n=1 Tax=Chryseobacterium
           gleum ATCC 35910 RepID=C0YRY4_9FLAO
          Length = 304

 Score =  208 bits (529), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 52/269 (19%), Positives = 112/269 (41%), Gaps = 10/269 (3%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           ++ +N + ++     +A   +  H  T  +T+ +H H   QL+ A  G +    +   W 
Sbjct: 35  LYTMNDSHFKAVEEDDAE-FYVYHVLTGNVTTEIHYHSSAQLVYAEGGIVHVFTDQKHWY 93

Query: 62  VPPQYAVWIPGGVEHSNQVTAN-AELCFLFI--EPSAVTMPTTCCTLKISPLCRELILTL 118
           +P +  +WIP G  H    T+   +L   +   E +            ++ L RE+I   
Sbjct: 94  LPARCFMWIPAGTPHYIFSTSPKVDLFNFYFKKEENESGFFDEINIYSVNNLLREMIFYT 153

Query: 119 ANRTT-----TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVE 173
            +                + L  VL ++  +     +  P      +  +   +     +
Sbjct: 154 KDWDGKITKNDHSKYYFLKALKGVLQEKKHKHLAFPIQHPFPKDETLLKIARYIHANLEK 213

Query: 174 WGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTL 232
              +   A  F MS R L+R   +  G+++ ++ + L++  +L+ +++G   + ++A  +
Sbjct: 214 PLTIESTAKEFGMSTRTLSRKFKEILGMNYVRFLRALRITRSLELMLEGKYNMYEIAMMV 273

Query: 233 GYDSTTAFITMFKKGLGQTPGRYIARLTT 261
           GY+S ++F  +FKK +G  P  Y  +L  
Sbjct: 274 GYNSLSSFSNIFKKIIGVPPTEYQHKLRG 302


>UniRef50_B4SKF1 Transcriptional regulator, AraC family n=2 Tax=Stenotrophomonas
           maltophilia RepID=B4SKF1_STRM5
          Length = 267

 Score =  207 bits (528), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 107/247 (43%), Gaps = 1/247 (0%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           P         +      +      H H  GQ      G +   ++    + PP YA+WIP
Sbjct: 16  PTFSQLPGPIYFRQGAMEPTNWGTHSHPWGQFNFVAQGVMEMKIDGEWMVSPPHYAIWIP 75

Query: 72  GGVEHSNQVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130
            G+ H ++  +       ++ P+    +P  C  L++SPL REL+  LA +  T    P 
Sbjct: 76  PGMAHYSRNRSALAYRSAYLSPALSRRLPVRCHALEVSPLLRELLHELAQQGVTDPKTPA 135

Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190
            +R+  V+ D++         LPV+S   ++ ++  + K      ++   A    MS R 
Sbjct: 136 QKRMAAVVIDQIVNAAVLPSFLPVASSDVLKQVMVHVEKHLSAAESVADIARRHHMSVRK 195

Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250
           L RL   E G+S   WR +++ + A + L     + ++A  LGY   +AF  MFK+    
Sbjct: 196 LERLARSELGMSLGDWRGRVKFVRATEALCTRRPISRIAEELGYSGVSAFAEMFKRHAQC 255

Query: 251 TPGRYIA 257
           TP +Y  
Sbjct: 256 TPDQYRK 262


>UniRef50_Q5LMG8 Transcriptional regulator, AraC family n=1 Tax=Ruegeria pomeroyi
           RepID=Q5LMG8_SILPO
          Length = 238

 Score =  207 bits (528), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 65/234 (27%), Positives = 97/234 (41%), Gaps = 2/234 (0%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
              V        D   S  H+H + QLI A+ G +    +     +PP Y + +P    H
Sbjct: 5   PHDVVGYARDYRDGYVSVRHRHPRHQLIYAISGLMMAETDAMSHAIPPGYGLIVPAQQPH 64

Query: 77  SNQVTANAELCFLFIEPSAVTMPT--TCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134
             ++     L  L++            C  + ISPL  +LI  L          P    L
Sbjct: 65  EIRMIGAVRLQSLYVRAGLPRADALARCRLVTISPLLAQLIAALCEMANPWPMPPRALHL 124

Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
            Q++  EL   P   L LP  + P++R + + +   P    +L  WA    MS R  +R 
Sbjct: 125 SQLILIELLAAPVSPLALPYPTDPRLRRVCDGLIATPASPRSLDDWAAEAGMSRRTFSRH 184

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGL 248
              ETGLSF +W Q+L+   AL+GL KG    +VA  LGY +      M ++  
Sbjct: 185 FQLETGLSFGKWAQRLRCQAALRGLAKGRPAARVARELGYANAYTMAAMMRRMT 238


>UniRef50_Q0B8S9 Transcriptional regulator, AraC family n=1 Tax=Burkholderia
           ambifaria AMMD RepID=Q0B8S9_BURCM
          Length = 261

 Score =  207 bits (528), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 69/230 (30%), Positives = 101/230 (43%), Gaps = 1/230 (0%)

Query: 32  TSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI 91
            SP H H  GQL+    GA      + L  + P  A WIP  + HS  +        ++I
Sbjct: 29  ESPRHVHSCGQLLYPERGAALLETPHHLVRLGPGQAAWIPPDLPHSILMGRPYRYHSVYI 88

Query: 92  EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151
                  PT      +SPL +ELIL       T  +  +     +V+  E+ + P+    
Sbjct: 89  GAGLYAEPTF-SVSHVSPLLKELILDAERWDDTDASSDVRFWKTRVIVAEIRRAPRVAAG 147

Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211
           +P+   P+I  +   +   P +   LG WA     SE+ L R  VK TGLSF+QWR   +
Sbjct: 148 MPIPDDPRISVICRALEIDPADARMLGDWARQVGASEKTLQRAFVKSTGLSFQQWRTHAR 207

Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTT 261
           +  AL     G  +  VA  +GY S  A+   F++  G +PGR   R T 
Sbjct: 208 MTKALAMHRCGARLLDVAVAVGYSSEGAYAHAFRQFYGYSPGRMKPRSTG 257


>UniRef50_D1UHS6 Transcriptional regulator, AraC family n=1 Tax=Burkholderia sp.
           CCGE1001 RepID=D1UHS6_9BURK
          Length = 276

 Score =  207 bits (527), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 70/257 (27%), Positives = 113/257 (43%), Gaps = 3/257 (1%)

Query: 20  VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79
           +         +   P H H+  Q++ A+ GA+T   +    ++ P+ AVW+P G+ H   
Sbjct: 17  LTVRAQFIPAQRFFPEHSHQWHQMVYAISGALTVISDGGSIVISPEQAVWLPTGLRHRVG 76

Query: 80  VTANAELCFLFIEPSAVT--MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137
               +E   L+I     +     +     +SPL R LI+           +    R+ Q+
Sbjct: 77  SLLGSEFRSLWIADETGSTLAGVSPMVFAVSPLLRALIVEATAIAGQPDDDGYVGRITQL 136

Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197
           + D+L +       LP      +  + E +   P +     +WA    MS R LAR  V 
Sbjct: 137 ILDQLRRARPLPTALPWPRDDTLAQLCEKLHADPADPRGPEEWAQRLGMSARTLARRFVA 196

Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY-I 256
           ETG+S R WR++L+L  A++ L  G  V + A  LGY ST+AFI  F+  LG +P  +  
Sbjct: 197 ETGMSLRSWRRRLRLFRAIELLGGGMDVTRTALELGYSSTSAFIYAFRLELGSSPQAFMR 256

Query: 257 ARLTTVSPQSAKPDPRQ 273
            R   V+     P  + 
Sbjct: 257 GRSDRVASDPVTPSQQD 273


>UniRef50_A9BQK3 Transcriptional regulator, AraC family n=8 Tax=Burkholderiales
           RepID=A9BQK3_DELAS
          Length = 309

 Score =  206 bits (526), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 72/287 (25%), Positives = 120/287 (41%), Gaps = 24/287 (8%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           M     L+ +      +  V    H  +       H H   Q+ ++L G +  +      
Sbjct: 1   MEPVEALHPHLFVPTPQRPVRAKQHRLSARTRVIPHSHSWAQIAISLDGVLHLSAPQGTL 60

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFI-------EPSAVTMP-----------TTC 102
           + PP  AVWIP G+ H+  +   A+L  +++        P    +P             C
Sbjct: 61  IAPPSKAVWIPPGLVHAVAMVEEADLVSIYVLQDDPAQGPVLPDLPSCGVACNPQDWARC 120

Query: 103 CTLKISPLCRELILTLANRTTTQRAEP-----MTRRLIQVLFDELPQQPQQQLHLPVSSH 157
             L++SPL RELI  L  ++  Q A           L  +L +EL +  +  L + +   
Sbjct: 121 RVLEVSPLMRELITALPKQSDDQPAPDAATLQREHHLSALLLEELRRASEVHLGVNMPQD 180

Query: 158 PKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQ 217
            ++R + E +   P +  +L  WA     S R +ARL  ++ G SF  WRQQ+ L   L 
Sbjct: 181 KRLRMLCEAVVADPTQHESLADWAADTGASPRTVARLFQQQLGCSFTTWRQQVVLAHGLS 240

Query: 218 GLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSP 264
              +G  +Q++A  LGY S +AF  M  + +G  P R+  +    + 
Sbjct: 241 LAARGLPIQQIAAELGY-SPSAFSAMVHRTVGMPPARFFGQQAGSAA 286


>UniRef50_D1XNW1 Transcriptional regulator, AraC family n=1 Tax=Streptomyces sp.
           ACTE RepID=D1XNW1_9ACTO
          Length = 291

 Score =  206 bits (526), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 107/247 (43%), Gaps = 5/247 (2%)

Query: 19  AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78
           A+   +   +       H H   +L+    G +T  V + ++ V   + +W+P G  H  
Sbjct: 37  AIVAGLRIPSVPTEWSPHAHPLHELVWVRGGTLTSRVRDRVFTVSTGHGLWMPAGTTHGG 96

Query: 79  QVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137
           +VTA A     F  P            ++++PL   L+  L+       A      ++  
Sbjct: 97  RVTAGARFYEAFFAPDRAPFAFEEPRAIEMTPLLESLLNHLSRTDLDAAARARAESVVYD 156

Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197
           +     Q  ++Q  L +    +I  + E +   P +  +L +WA    +S+R + R   +
Sbjct: 157 VL----QPSERQFALQLPGDARIDVIAEALLDDPADCRSLEEWARLLGISDRTVTRAFRQ 212

Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
            TGLSF QWRQ L++  AL  L +G  V  V+  LGY   + FI  F+K +G TPG + A
Sbjct: 213 ATGLSFAQWRQALRVHRALALLSEGLDVTTVSEVLGYAQPSTFIASFRKVVGTTPGAFSA 272

Query: 258 RLTTVSP 264
              +   
Sbjct: 273 SAGSAPE 279


>UniRef50_D2BBL9 Transcriptional regulator, AraC-family n=18 Tax=Actinomycetales
           RepID=D2BBL9_STRRD
          Length = 278

 Score =  206 bits (525), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 72/255 (28%), Positives = 117/255 (45%), Gaps = 7/255 (2%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
           H    +  +           H H + Q++ A  G ++ T +   W+ P   A+WIP G  
Sbjct: 6   HNPRASTGLRPLPAGAGIDAHWHDENQIVYAGRGVLSVTTDAGSWIAPAIRAIWIPAGTV 65

Query: 76  HSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134
           H ++   + +L  + +      +       + + PL RELI+T   +          RRL
Sbjct: 66  HEHRAYGDTDLHLVGLPVKDNPLRLDQPAVISVGPLLRELIITYTEQP--ADLTAERRRL 123

Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
             VL D L    QQ +H+P +  P++  +  ++   P +   L +      +S+R L RL
Sbjct: 124 RAVLLDRLRHSAQQPVHVPAARDPRLVAVCAILRDNPADNRTLARLGAVAGVSDRTLTRL 183

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
              E G+SF QWR QL+L  AL  L +   V  VAH  G+ S++AFI +F++  G TPG 
Sbjct: 184 CRAELGMSFPQWRTQLRLHYALLLLAEDTPVTAVAHRCGWASSSAFIDVFRRAFGHTPGT 243

Query: 255 YIARLTTVSPQSAKP 269
           +      +SP +  P
Sbjct: 244 HR----ALSPTATAP 254


>UniRef50_D0L975 Helix-turn-helix-domain containing protein AraC type n=3
           Tax=Corynebacterineae RepID=D0L975_GORB4
          Length = 259

 Score =  206 bits (524), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 70/258 (27%), Positives = 110/258 (42%), Gaps = 4/258 (1%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           M           +      V               H H   Q++ A  G +  T +   W
Sbjct: 1   MSETRQYGEIAAESAPNPTVD-AADRHPGGHRIARHHHLTHQIVYASSGLVEVTTQAGTW 59

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLA 119
           + PP  A+WIP    H ++   N E   + IEPSA          + ++ L RELI+  +
Sbjct: 60  VAPPDRAIWIPALAWHEHRFYGNTEFNCVSIEPSARPFADDAPVVVAVTGLVRELIVEGS 119

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
              T+    P  +RL  VL D+L +  +  L L   S  ++     ++        +L  
Sbjct: 120 R--TSDPTCPAQQRLRSVLLDQLRRTDETALSLRTPSDDRLVHACAIVTADLTRNHSLAD 177

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
                  S+R L+RL+  E GL++ QWR  ++L  AL  L +G  V +VAH  G+ + +A
Sbjct: 178 LGRTVGASKRTLSRLLRDELGLTYPQWRTSVRLHRALILLAEGAGVTEVAHRCGWATPSA 237

Query: 240 FITMFKKGLGQTPGRYIA 257
           FI  +++ LG TPG   A
Sbjct: 238 FIDAYRRVLGHTPGSRRA 255


>UniRef50_Q3JG82 AraC family regulatory protein n=50 Tax=Proteobacteria
           RepID=Q3JG82_BURP1
          Length = 902

 Score =  205 bits (523), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 78/257 (30%), Positives = 122/257 (47%), Gaps = 3/257 (1%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
               VA        E T+  H H +GQL+ A  G ++  +++  W+VP  +AVWIP    
Sbjct: 104 EGPFVAAVELTQRTERTTARHSHARGQLVGASSGLVSIGLDDEDWVVPAIHAVWIPPHRV 163

Query: 76  HSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRL 134
           HS +         +F+       +P     + +S L RE +   A+       +    R+
Sbjct: 164 HSLRSFGPFAGWSVFVAEDRCAALPGAPRAIVMSTLLREAVRRAASW-RGAALDAARARI 222

Query: 135 IQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
             V+ DE+         LP    P++R + + +A    +     +WA +  M+ R L+R 
Sbjct: 223 ANVILDEIAAAQTGPRGLPRPRDPRLRRIADALAGDLADNRRADEWAAWAGMAPRTLSRR 282

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
            V ETG +F QWRQQ +++ AL+ L  G TV  VA  LGYD+ +AFI MF++ LG TPG+
Sbjct: 283 FVSETGFTFTQWRQQARVLRALERLADGVTVTAVALDLGYDNVSAFIDMFRRTLGTTPGQ 342

Query: 255 YIARLTTVSPQSAKPDP 271
           Y+        +   P P
Sbjct: 343 YVNA-RAGDARDGAPAP 358


>UniRef50_A0KEB0 Transcriptional regulator, AraC/XylS family n=25 Tax=Proteobacteria
           RepID=A0KEB0_AERHH
          Length = 274

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 75/262 (28%), Positives = 137/262 (52%), Gaps = 4/262 (1%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           M   L  + ++PD+H  +A+      G     S  HQH++ QL+ A  G +T  +++ + 
Sbjct: 1   MAFILPDHPFDPDQHDGSAIGIASALGW--HDSGRHQHKRHQLLFAQAGCMTIELDDQVC 58

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120
           ++PP  A W+P G+ H   +        L+ +P    +PT    L ++PL RE+I  +A 
Sbjct: 59  LLPPTRAAWLPAGLPHRVLMRGVVAYRSLYFQPE-PGLPTEMAVLAVNPLLREIIERMAI 117

Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180
                +        + +L +EL Q P++   LP+ S P++   ++ + +G      L + 
Sbjct: 118 WPWD-KPAAEQHCTLALLQEELAQAPRESWQLPLPSDPRLAGWLQEVKRGDTLPDRLNRL 176

Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240
           A     S++ + R+ ++ETG+S++ WRQQ +L+ AL+ L + + + +VA TL + S +AF
Sbjct: 177 AERVGASDKTIGRIFMRETGMSYQAWRQQWRLLRALELLAEAEPISRVAATLEFASDSAF 236

Query: 241 ITMFKKGLGQTPGRYIARLTTV 262
           I+ F++  GQTP RY+      
Sbjct: 237 ISFFRQHTGQTPLRYLNSRGES 258


>UniRef50_B5XX95 Transcriptional regulator, AraC family n=7 Tax=Enterobacteriaceae
           RepID=B5XX95_KLEP3
          Length = 266

 Score =  204 bits (521), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 65/236 (27%), Positives = 113/236 (47%), Gaps = 9/236 (3%)

Query: 26  AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85
           +       P H H +GQL+ A  G +    E+  W++PPQ A+W+P    HS  + +  +
Sbjct: 32  SYQRGEVDPPHHHVEGQLLFATRGVMLVQTESDRWVIPPQRALWLPPLHIHSYHLLSQTD 91

Query: 86  LCFLFIEPSAVTM------PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLF 139
           L  ++   S +              +  +PL +ELI  L +      A P  R++  +L 
Sbjct: 92  LRAVYFSSSLIAECTSFTKSQQVHVITATPLVKELIAGLFS---EDYARPSQRKIALLLL 148

Query: 140 DELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKET 199
           + L + P   + LP+ +  ++ +    +        +L + A   AMSER  +RL +K+T
Sbjct: 149 EILSEAPPLTMALPMPNDERLFSAARSLLVNQRWEASLSELAFMSAMSERTFSRLFMKDT 208

Query: 200 GLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           G SFR W+Q+ ++  +L  L  G  +++VA+ LG+    AF   F+  LG TP  +
Sbjct: 209 GFSFRTWKQRARICASLDLLTNGVPIKQVAYQLGFSCPAAFTAAFRCILGATPRDF 264


>UniRef50_A5U9G2 AraC-family transcriptional regulator n=12 Tax=Mycobacterium
           tuberculosis complex RepID=A5U9G2_MYCTA
          Length = 263

 Score =  204 bits (521), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 4/229 (1%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
                   H+H   Q++    GA++ T     W+ P   A+WIP G  H ++   + +  
Sbjct: 17  PPGARIERHRHPSHQIVYPSAGAVSVTTHAGTWITPVNRAIWIPAGCWHQHKFHGHTQFH 76

Query: 88  FLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146
            + ++P      P T   L ++PL REL++  +    T        R++ VL D+LP   
Sbjct: 77  GVALDPQRYRGGPATPTVLAVNPLMRELVIACSQADRTDT--DEHHRMLAVLQDQLPTTS 134

Query: 147 -QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
            ++ L +P  +  ++R    ++A    +   L Q  G   +S+R L+RL   E G++F Q
Sbjct: 135 IREPLWVPSPTDRRLRHACALIADNLTQPLTLQQIGGRIGVSQRTLSRLFSDELGMTFPQ 194

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
           WR QL+L  AL  L +   V  VA   G+ + +AFI  +++  G TPG+
Sbjct: 195 WRTQLRLQHALVLLAERHDVTSVASECGWATPSAFIDTYRQAFGHTPGQ 243


>UniRef50_A5FK83 Transcriptional regulator, AraC family n=3 Tax=Bacteroidetes
           RepID=A5FK83_FLAJ1
          Length = 273

 Score =  204 bits (521), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 6/241 (2%)

Query: 21  AFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV 80
            +C H    EL  P H+H K QL+ A    +  T E   + +P ++ +WIP GVEHS + 
Sbjct: 23  IYCHHDLMGELFIPPHRHVKAQLLYAEGDVVFVTTETKTYFLPARHFIWIPSGVEHSIEP 82

Query: 81  -TANAELCFLFIEPSAV--TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137
            + +  +  L+                  ++ L  +++L         +       + + 
Sbjct: 83  KSESVTMRNLYFPVEKDENDFYKVEGIYPVNNLLLQMMLFTNRWNGDLKKGTPNFAIAKA 142

Query: 138 LFDELPQQPQQ--QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
           +   LPQ       L LP     ++  ++  +     E       A  F  SER+L RL 
Sbjct: 143 IKAILPQICTNNLPLELPQPKDKRLSKILRYIENNLGETILFADVAHEFGFSERSLYRLF 202

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
            K+ G+SF Q+    +++ A++ L++   +V++VA  +GY+S   F   F K LGQ P  
Sbjct: 203 QKDLGMSFIQYYTIRRILKAIELLLERKLSVKEVAEEVGYNSVPTFSNTFFKILGQRPSD 262

Query: 255 Y 255
           Y
Sbjct: 263 Y 263


>UniRef50_A0KTL0 Transcriptional regulator, AraC family n=25 Tax=Gammaproteobacteria
           RepID=A0KTL0_SHESA
          Length = 292

 Score =  204 bits (520), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 70/230 (30%), Positives = 116/230 (50%), Gaps = 8/230 (3%)

Query: 35  VHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS 94
           +H+H   QLIL L G +      AL++VP   A+++P GV H +    +     +++ P 
Sbjct: 57  LHKHCWHQLILPLQGLLQTEANGALFLVPHTTALFVPAGVIHESVAITDTCFIGVYLNPM 116

Query: 95  A-VTMPTTCCTLKISPLCRELILTL-------ANRTTTQRAEPMTRRLIQVLFDELPQQP 146
                  T   + +S   REL+LT+        +      A P  +RL++VL+D++    
Sbjct: 117 CGRDYGATIKPVAMSAFLRELVLTIRKQCVFNTSMNVEPIALPTIQRLLEVLYDQINSAE 176

Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206
            Q   L +    +++ + E + + P    +L +W      SER L+RL V+E G SF  W
Sbjct: 177 GQTFKLLIPQDRRLKLIFEHLTQTPALDLSLAKWGEMVGASERTLSRLFVREFGSSFGLW 236

Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           RQ L+LI +L  L    ++Q VAH +GY + +++I  FK+  G TP R+ 
Sbjct: 237 RQHLRLIYSLSLLATNLSIQNVAHQIGYQNDSSYIKAFKERFGMTPQRFR 286


>UniRef50_Q1ZV01 Transcriptional regulator, AraC family protein n=2
           Tax=Photobacterium angustum S14 RepID=Q1ZV01_PHOAS
          Length = 283

 Score =  204 bits (519), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 11/257 (4%)

Query: 8   NGYEPDRHHEAAV---AFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPP 64
             ++PD      V   A   H     L S +H H KGQL+    G     +EN+ + + P
Sbjct: 17  KHFDPDAIKSPIVPIYATFSHKEEHSLRSKMHSHSKGQLVYIKSGTAIVRLENSTYSILP 76

Query: 65  QYAVWIPGGVEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTT 123
              +WIP G+ H+  +  N +   ++I+      +     T  +S L  E+I T+   + 
Sbjct: 77  NQMIWIPSGMIHNVILRNNVDFRAIYIDQKQFPRLSKNFETFFVSVLLEEIIETICLSSF 136

Query: 124 TQRAE-PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEW---GALGQ 179
                      L  +L  ++ +              +   +   + K   +      L +
Sbjct: 137 HTDWMVGTEFHLQSILIMKMQKLSSTPQWPAFPKDKR---VCNYLLKFYEKGEMFPRLYE 193

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
                  SER + RL V+ TG+S+++WRQ  +L++A++ L    ++ ++AH L + +T+A
Sbjct: 194 LVSNTGASERTIHRLFVQSTGMSYQKWRQHARLMLAIELLSTNKSITEIAHHLEFSTTSA 253

Query: 240 FITMFKKGLGQTPGRYI 256
           FI+ FK     TP +Y 
Sbjct: 254 FISFFKSYQNITPKKYR 270


>UniRef50_A8L2S5 Transcriptional regulator, AraC family n=3 Tax=Actinomycetales
           RepID=A8L2S5_FRASN
          Length = 263

 Score =  203 bits (518), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 70/238 (29%), Positives = 99/238 (41%), Gaps = 4/238 (1%)

Query: 24  IHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTAN 83
           +   TD      H H   QLI    G +        W+VPP  AVW+P GV H++Q    
Sbjct: 28  LRRLTDRERIDWHDHTDHQLIYPGTGVLRVVTRVGSWVVPPLRAVWLPAGVAHAHQAHGP 87

Query: 84  AELCFLFIEPSAVTMPT-TCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDEL 142
             +  L          +     + +  L RE+I  L     T  A    R L  VL   L
Sbjct: 88  THMHSLAFSDVDDPFGSPDPTVVAVPALLREIIRALTA---TGLAGADRRDLTAVLLRSL 144

Query: 143 PQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLS 202
               + +L LP     ++  +   +A  P +   L +       SER L+RL  ++TG++
Sbjct: 145 RPVTELRLCLPQPRDDRLVALTAALAADPADPRTLAELGAAVGASERTLSRLFRRQTGMT 204

Query: 203 FRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260
           F QWR QL+L   L  L  G+ V  VA   GY + +AF   F+   G TP RY     
Sbjct: 205 FPQWRAQLRLHHGLTLLAGGEPVTTVAFACGYSNPSAFTAAFRDAFGVTPARYARETR 262


>UniRef50_D1BGA1 DNA-binding domain-containing protein, AraC-type n=1
           Tax=Sanguibacter keddieii DSM 10542 RepID=D1BGA1_SANKS
          Length = 293

 Score =  203 bits (517), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 108/251 (43%), Gaps = 4/251 (1%)

Query: 6   NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65
                +P      +V+      +       H H   +L+    G +T    +  +MVP  
Sbjct: 6   QPAALDPPAPRVRSVSSRHFPPSGPDRWDSHSHDVHELLWGAEGVLTVETADGYFMVPAV 65

Query: 66  YAVWIPGGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTT 124
             +WIP GV H+ Q          +++             + ++PL REL++ +A     
Sbjct: 66  LGLWIPAGVAHAVQCAGGTGFWCTYVDADVRPEFTGRTTAVTVTPLLRELLVHMAAEP-- 123

Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184
                +      +    L       + LP+ +  ++ ++   +   P +  +L  W    
Sbjct: 124 -MRAEVRDASAALAVALLEAVDMSPMVLPMPTDARLASIARALLDDPGDRRSLDDWGTEV 182

Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244
           ++S RNL+RL  +ETG++F QWR   ++ +A+  L  G +V  V+  +GY + +AF+  F
Sbjct: 183 SVSVRNLSRLFHRETGMTFAQWRVHARVRLAVGLLASGLSVGTVSRRVGYSTPSAFVQSF 242

Query: 245 KKGLGQTPGRY 255
           ++ LG TPG Y
Sbjct: 243 RRVLGHTPGWY 253


>UniRef50_B9TN09 HTH-type transcriptional repressor of iron proteins A, putative n=1
           Tax=Ricinus communis RepID=B9TN09_RICCO
          Length = 221

 Score =  203 bits (517), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 64/218 (29%), Positives = 97/218 (44%), Gaps = 6/218 (2%)

Query: 44  ILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANA-----ELCFLFIEPSAV-T 97
            +   G I         ++PP    WIP  + H+  V  N          + + PS    
Sbjct: 2   YIPAQGVILVEAGGNRQVLPPGRLGWIPPLMPHAASVHGNTLRPGLAGHTIHLAPSLCVG 61

Query: 98  MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSH 157
            P     L++SPL   L+  +         +    RL+ V  DE+       LHL +  H
Sbjct: 62  FPAQSLALRMSPLAVSLMERMFRWPNGTPPDAAGLRLMNVFLDEMRAAAPDPLHLVMPRH 121

Query: 158 PKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQ 217
           P++  M   +A+ P +   L  WA     S R+L R    ETG+S   WRQ  +L   ++
Sbjct: 122 PRLLAMAATIAENPADETDLDAWAQQLGWSRRSLTRHFRNETGMSVVAWRQVARLQKGME 181

Query: 218 GLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            L  G +V  VA +LGYDS ++FI +F++ LG TP R+
Sbjct: 182 LLNGGASVTTVALSLGYDSVSSFIALFRRILGTTPARF 219


>UniRef50_D1XRU9 Transcriptional regulator, AraC family n=4 Tax=Actinomycetales
           RepID=D1XRU9_9ACTO
          Length = 272

 Score =  202 bits (514), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 66/251 (26%), Positives = 102/251 (40%), Gaps = 4/251 (1%)

Query: 6   NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65
           N++  + D    A +               H+HR+ Q +    G +        W VPP+
Sbjct: 3   NVSLADVDHVDRAVLPIGTDY-PPGHVLDWHRHRRAQFLYGATGVMVVDTAEGTWTVPPE 61

Query: 66  YAVWIPGGVEHSNQVTANAELCFLFIEPSAVTM-PTTCCTLKISPLCRELILTLANRTTT 124
            AV IP    H  ++        L+IEP AV   P TC  +++ PL REL+L   +    
Sbjct: 62  RAVLIPAATRHRVRMLG-VSTRSLYIEPGAVPWWPGTCTVVEVPPLLRELLLVAVDLPLD 120

Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184
                    ++++L  E+ ++     H+ +     +  +       P        WA   
Sbjct: 121 YSLAGREGSIVELLLHEIAERAPLPFHVAIPVSADLAGLCRAYLAAPDAGVTNAAWAART 180

Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244
           AMSER   R    ETG S   WR + +L+ A+  L    +V +VA  LGY S  AF   F
Sbjct: 181 AMSERAFTRRFRAETGDSPAVWRSRARLLAAVPLLR-TASVSEVAGRLGYASPAAFTAAF 239

Query: 245 KKGLGQTPGRY 255
            +  G  P R+
Sbjct: 240 TRAFGLPPSRF 250


>UniRef50_C3JM12 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus
           erythropolis RepID=C3JM12_RHOER
          Length = 278

 Score =  202 bits (514), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 71/255 (27%), Positives = 110/255 (43%), Gaps = 7/255 (2%)

Query: 3   HRLNLNGYEPDRHHEAA---VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENAL 59
           H    + + P      A   +   I         P H H + +LI +  G +   +EN L
Sbjct: 20  HLRESDRHTPMARAVPAPFQLTTYIVETDHITRWPEHAHVEHELIWSDRGVVNMIIENQL 79

Query: 60  WMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTL 118
           W V P   +WIP GV H  Q   +         P          C + +S   R L++ L
Sbjct: 80  WTVTPGVGLWIPRGVLHEGQANPHVAFRATLFTPELWTPAWNEPCIVTLSEAARALLIHL 139

Query: 119 ANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALG 178
           A+   T        R  QV  D L         +P+   P++R +V+ +   P +  +L 
Sbjct: 140 AH---TGMPAEQRLRAQQVCVDLLTPASAPHFDVPIPRDPRLRMLVDKVLSDPADDRSLD 196

Query: 179 QWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTT 238
           QWA    +S R + R+   E  LSF QWR  +++  AL  L  G +V  V+  +GY +++
Sbjct: 197 QWAHVLNLSRRTVTRIFAAELALSFAQWRTLVRMSTALGMLGTGMSVNAVSRRVGYGTSS 256

Query: 239 AFITMFKKGLGQTPG 253
           +FI  F+K +G TPG
Sbjct: 257 SFIAAFRKTVGYTPG 271


>UniRef50_A0KHN7 Transcriptional regulator, AraC family n=1 Tax=Aeromonas hydrophila
           subsp. hydrophila ATCC 7966 RepID=A0KHN7_AERHH
          Length = 268

 Score =  201 bits (513), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 1/267 (0%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           M  L     +        +         +  S  H H  GQL L   G +   +++   +
Sbjct: 1   MPYLPYLDQDAKLAAPNPLYLRYQQIQADSASAPHSHPWGQLSLISLGVMEIVLDDHRLV 60

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFI-EPSAVTMPTTCCTLKISPLCRELILTLAN 120
            P  Y +W+P  +EH++      +   +++    A  +P     L+++PL R ++    +
Sbjct: 61  APADYLIWVPADLEHASYNQQALDYTSIYVNHALAARLPAEPRLLQMTPLIRAILADFCD 120

Query: 121 RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW 180
           R      +    R  ++L ++L +   Q  +LP+S    +  M+  +   P +   L QW
Sbjct: 121 RKLGHMEDEWDVRQAELLVEKLTRTRCQDSYLPMSQDKLLAPMLAALHSDPADPRTLAQW 180

Query: 181 AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF 240
           A     +ER LAR  V+E G++F QWR +L+L+ AL  L     VQ++   LGY ST+AF
Sbjct: 181 AEQLHTTERTLARRCVRELGMNFGQWRARLKLLKALAWLKGELPVQEIGWRLGYGSTSAF 240

Query: 241 ITMFKKGLGQTPGRYIARLTTVSPQSA 267
           I MF + LG +P RY  +L   + Q+A
Sbjct: 241 IAMFNRELGCSPQRYRQQLGIGAGQAA 267


>UniRef50_B4SPX2 AraC protein arabinose-binding/dimerisation n=2
           Tax=Stenotrophomonas maltophilia RepID=B4SPX2_STRM5
          Length = 266

 Score =  201 bits (512), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 6/262 (2%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           M  L  + +  D    +A    I A   +  S  HQH + QL+    G    T  + + +
Sbjct: 5   MAWLQPDAH-FDADAWSAPVLGIAASLADHDSGWHQHARAQLLYTRQGCTRLTYGDRISL 63

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLAN 120
           +PP  A WIPGG+ H  Q+    +   L+ + +    +P     + + PL + L+  +A 
Sbjct: 64  LPPARAAWIPGGLRHRAQMRQAVDYRSLYFDATLSAQLPRQPAIIGVGPLLQALLEPIAQ 123

Query: 121 RTTTQRA-EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
               Q    P     + +   E+   P   + LP+   P+I   + +  + P E   LG+
Sbjct: 124 APFDQDWQAPRAHHQLALCVLEIAAAPVAPMDLPLPRDPRIARCLPLAEQLPPE---LGE 180

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
            A    +S R + RL+ ++TG+S++ WRQQ +L+ A++ L+ G  V  VA   G+ + + 
Sbjct: 181 LAARTGLSARTVGRLMQRDTGMSYQAWRQQWRLMRAMELLLLGHRVAHVAQDTGFSAESP 240

Query: 240 FITMFKKGLGQTPGRYIARLTT 261
           FI  F+   G TP  +      
Sbjct: 241 FIAFFRSMTGTTPAAFQRHAKG 262


>UniRef50_C3X452 Putative uncharacterized protein n=2 Tax=Oxalobacter formigenes
           RepID=C3X452_OXAFO
          Length = 254

 Score =  200 bits (510), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 105/239 (43%), Gaps = 7/239 (2%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
              +  P H   +   +    G +    E   W V P    W+P    +  +   +    
Sbjct: 15  PAGIAQPGHAQNESWFVYLEKGFLAVEDERGYWTVLPGRIGWMPPHFHYEIRAYGHVAGI 74

Query: 88  FLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTT------QRAEPMTRRLIQVLFD 140
              + P     +P     L IS L   ++               Q       RL+QVL D
Sbjct: 75  CASLTPLLCAGLPEIPSALAISSLVAPILERAVTWQPDGVGGVFQPLPARQERLLQVLLD 134

Query: 141 ELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETG 200
           EL    Q Q  L +    ++  +   + K P E   + +WA    +S R+++R   +ET 
Sbjct: 135 ELRYSSQGQARLLLPKDKRLNYLAREILKNPGERRTVEEWAERMRISSRSISRHFSRETN 194

Query: 201 LSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
           ++F QWRQ   LI+A++ L +G++V++ A ++GY++ +AFIT FKK  GQTP ++  + 
Sbjct: 195 MTFAQWRQNASLIVAMKRLAEGESVREAARSVGYENVSAFITSFKKAFGQTPAQFRQQF 253


>UniRef50_C9PG34 Transcriptional regulator AraC family n=1 Tax=Vibrio furnissii CIP
           102972 RepID=C9PG34_VIBFU
          Length = 245

 Score =  200 bits (510), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 2/235 (0%)

Query: 27  GTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL 86
                 +  H H + QL     G +    E   W V      W P G  H  +V  + E 
Sbjct: 11  HPQSAVTGWHTHLESQLFWVNRGILMVEAEQQRWTVASGCLAWNPAGCRHRTEVITDVEG 70

Query: 87  CFLFI-EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
             L++ + + +        ++   L   LI  L+  T    ++   +  + +L  E+   
Sbjct: 71  ELLYVQDATMLDAMPAPKLIRCDDLTSALIKRLSG-TEYNASDTCEQAWLALLGSEISHA 129

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
           P   L LP+    + R +   +   P    +    A  F +S R L RL  ++TG++F  
Sbjct: 130 PATPLQLPLPEDKRARKVANYLIAEPENRLSQETLAERFGLSSRTLHRLFRQQTGMTFVH 189

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260
           WRQQ +L+ +L  L  G ++ +VA   GYD+T ++I +F++  G TP  Y+ +  
Sbjct: 190 WRQQSRLLHSLSLLEAGKSITEVALASGYDNTGSYIQLFRQRFGVTPKLYLRQRQ 244


>UniRef50_D1WVC3 Transcriptional regulator, AraC family n=3 Tax=Actinomycetales
           RepID=D1WVC3_9ACTO
          Length = 283

 Score =  200 bits (509), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 4/231 (1%)

Query: 37  QHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAV 96
            HR+ +L+ +  G +T      LWMVPP   +W+P G  H  + +A A     F+ P  V
Sbjct: 55  AHREHELLWSTTGNVTVEAAGHLWMVPPSLGIWLPAGTPHRVRASAGAVTYATFLSPELV 114

Query: 97  TM-PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVS 155
            +       + +  L REL+L   N   +  A     RL +V  D +       L +P+ 
Sbjct: 115 AVDWAGVVGIPMIRLLRELLLHNQNEEMSTEA---RLRLQRVGVDLIRPVRTVSLDIPLP 171

Query: 156 SHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMA 215
             P++ T+ E +   P +     +WA    +S R L R   ++TG+S  QWR  +++  A
Sbjct: 172 KTPELLTIAERIIADPADDRTTEEWARMIGLSGRTLMRWFQRDTGVSLTQWRILVRVRSA 231

Query: 216 LQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQS 266
           L  +  G  V  V+  LGY + + FI +F++  G TP  Y   +  V+   
Sbjct: 232 LIDIAAGKPVVAVSRRLGYANPSTFIDLFRQVTGHTPAAYFRSVNGVAEPG 282


>UniRef50_A0R133 Transcriptional regulator, AraC family protein n=1
           Tax=Mycobacterium smegmatis str. MC2 155
           RepID=A0R133_MYCS2
          Length = 257

 Score =  199 bits (507), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 67/248 (27%), Positives = 106/248 (42%), Gaps = 3/248 (1%)

Query: 13  DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72
           D      +A        E     H+HR+ Q +  + G +    E+  W+VP + AV IP 
Sbjct: 9   DNLARDVLALATDYSYGE-VLAPHRHRRAQFLYGVGGTMDVRTEHGSWLVPTERAVLIPP 67

Query: 73  GVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMT 131
             +H+  +        L+IEP AV   PT C  + +  L REL++        +  +   
Sbjct: 68  QTQHAVTMWG-VSTRSLYIEPGAVPWFPTRCTVVDVPTLLRELLVAAVAVPLDRPPDARD 126

Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191
             L  +   E+       L LP+     +          P      G WA    +SER +
Sbjct: 127 AALFALTLHEVAGCTSLPLDLPLPQPGALSEQCRRFLAAPRIDTTTGWWANALHVSERTV 186

Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251
           ARL  KE  ++  +W+++  ++ +L+ L +G  V  VA  LGY S  AF TMF + LG +
Sbjct: 187 ARLFRKELSMTVAEWQRRACVLHSLRQLTQGVAVSAVASDLGYSSPAAFSTMFSRALGTS 246

Query: 252 PGRYIARL 259
           P  +  R 
Sbjct: 247 PSAFSPRR 254


>UniRef50_Q13JN4 Transcriptional regulator, AraC family n=13 Tax=Proteobacteria
           RepID=Q13JN4_BURXL
          Length = 285

 Score =  199 bits (506), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 5/248 (2%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           P+ H +A            L    H H   Q++ A+ G +   V     +VPPQ AVW+P
Sbjct: 16  PELHDDADARSLARHYPRGLRIDPHSHTWAQVLYAVSGVMWVEVGREALVVPPQRAVWLP 75

Query: 72  GGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130
            G +HS  + +  E+  L++    V  +       +++ L RELI ++A    T   +P 
Sbjct: 76  AGTQHSIHMMSEVEMRNLYLHERNVGHLSRRSDVFEVNGLLRELITSIAEYEGTGARDPA 135

Query: 131 TR-RLIQVLFDELPQQPQQQL--HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187
                 ++   EL   P+  L   LP +S  ++  +   +   P    +  Q A     S
Sbjct: 136 YLDAAYRLAMLELAHAPRSSLRIALPDASDRRLEALCRAVIDNPSIAISFEQHAASVGAS 195

Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247
            R LARL  +E G+ F +WR+Q+QL +A+  L +G  V  +A +LG+   ++F  MF++ 
Sbjct: 196 VRTLARLFTRELGVGFAEWRRQVQLAVAVSWLAEGRPVSSIARSLGFQ-PSSFSDMFRRE 254

Query: 248 LGQTPGRY 255
           LG  P  +
Sbjct: 255 LGAPPTGF 262


>UniRef50_D1BCS3 DNA-binding domain-containing protein, AraC-type n=1
           Tax=Sanguibacter keddieii DSM 10542 RepID=D1BCS3_SANKS
          Length = 310

 Score =  199 bits (506), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 5/227 (2%)

Query: 38  HRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT 97
           HR+ +LI A  G++T   ++ LW VPP   +WIP    H  +          ++ P  V+
Sbjct: 85  HREHELIWATAGSLTVETDDQLWTVPPGLGIWIPALTRHHVRAAPGTLTHVTYLAPERVS 144

Query: 98  --MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVS 155
                    + +S    EL+L   + T       +  RL QV+ D L       L + + 
Sbjct: 145 PSWGAGIAGVTLSRAVHELVLHNKSSTLDDD---VRLRLQQVVVDLLVPVESASLDITMP 201

Query: 156 SHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMA 215
           +  ++R++ + +   P +   L +WA    +S R L+R  V+ETG++  +WR  +++  A
Sbjct: 202 TDLRLRSVADAIVADPADDRTLTEWADTLNISSRTLSRGFVRETGVTLTRWRILVRMRQA 261

Query: 216 LQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262
           L  +  G +V  VAH LGY + + F  +F++ LG TP  Y+  L   
Sbjct: 262 LLEISSGRSVAAVAHRLGYANPSTFTDLFRQTLGHTPAAYLRSLDAR 308


>UniRef50_C3JND7 Transcriptional regulator, AraC family n=2 Tax=Rhodococcus
           erythropolis RepID=C3JND7_RHOER
          Length = 285

 Score =  197 bits (501), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 105/230 (45%), Gaps = 3/230 (1%)

Query: 26  AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAE 85
           A   + T  +H+H   +L+ A+ G +       ++ VP   ++WIP  V H     +  E
Sbjct: 42  AVDSDYTWEMHRHSDHELLWAIDGVLEVRTPETVYTVPSGVSLWIPSFVPHEVTARSGTE 101

Query: 86  LCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
           L   ++  S VT       L   PL  +++  L         +   RR      D +   
Sbjct: 102 LSCTWLVASDVTGLDRVVALSTPPLLEQVLDHLTR---DDLTDAARRRAEAFAIDLVEPV 158

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
           P+    +P+ + P +R + + +   P +  ++ +WA    +S R L R    ETGL+F +
Sbjct: 159 PRLIFDVPLPTTPWLRQIADQLVASPADTRSVEEWAADAKVSTRTLTRRFPAETGLTFSE 218

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           WR +L+   A+Q L  G ++  VA   G+ S +AF   F++ +G TPG +
Sbjct: 219 WRMRLRAHHAMQLLALGRSISFVARKTGFRSESAFGAAFRRTMGVTPGEF 268


>UniRef50_C3JWU5 Transcriptional regulator, AraC family n=4 Tax=Rhodococcus
           erythropolis RepID=C3JWU5_RHOER
          Length = 274

 Score =  196 bits (500), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 5/242 (2%)

Query: 28  TDELTSPVHQHRKGQLILALHGAI-TCTVENALWMVPPQYAVWIPGGVEHSNQVTANAEL 86
           + +     H+H + +LI    G + T   +   W VPP   +W+P G  H+ +     E 
Sbjct: 31  SHQRQWAPHRHPEHELIWGNSGGMLTVVADGITWEVPPSAGLWLPAGALHAVKAGPGTEF 90

Query: 87  CFLFIEPSAVTMPTT-CCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
              +  P A   P+       +S L RE++L +  R     A     R   V FD L   
Sbjct: 91  FCTYFRPEAHAAPSGVPGLFGVSALLREVLLHMHRRNMPDEARSRAER---VAFDMLQPL 147

Query: 146 PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQ 205
               + +P+ + P+   + E +   P +  +L +WA     S R L R+  + TG++F Q
Sbjct: 148 EVAAVEVPMPTDPRALFVAEALVANPADQRSLSEWALTAGGSVRTLTRVFAQGTGMTFAQ 207

Query: 206 WRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQ 265
           WR Q+++  AL  L  G  V  V+  +GY++ +AF+ +F++  G+TPG  + + +     
Sbjct: 208 WRIQVRVRAALTYLAAGVPVSVVSRRVGYETPSAFVAVFRRVTGRTPGSMMNKGSVAPES 267

Query: 266 SA 267
             
Sbjct: 268 VP 269


>UniRef50_Q212B5 Transcriptional regulator, AraC family n=1 Tax=Rhodopseudomonas
           palustris BisB18 RepID=Q212B5_RHOPB
          Length = 268

 Score =  196 bits (500), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 62/244 (25%), Positives = 108/244 (44%), Gaps = 3/244 (1%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
            D    AA+   +    D  T  +HQH  G+L L   G +     N  W++P  +  W+P
Sbjct: 18  IDGLDGAAMRSALTKTLDVFTRGLHQHPHGELFLLRAGYLKAQSPNGRWLIPAGHLCWVP 77

Query: 72  GGVEHSNQVTANAELCFLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQR-AEP 129
              EH     +  +   +++ P     +P   C ++ + L   +I  L     T +    
Sbjct: 78  PFTEHGADTDS-TQGVRIYLAPELCGVLPRDSCVMRNTALILAVIDRLTAPDRTAKVLTE 136

Query: 130 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
             +RL+ VL DE+ +     + LP+    ++    E +   P +   L  +A    MS R
Sbjct: 137 PEKRLLGVLCDEIERARSTPILLPMPQDARLSRTAEKLLGSPNDQSDLDVFAAEAGMSRR 196

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG 249
           +  R    +TGLS  +WRQ  +L+  +  L  G +V + A  LGYDS ++F+ + ++  G
Sbjct: 197 SFTRNFKLDTGLSIGEWRQIARLMHGIDMLAAGKSVTETAFALGYDSISSFVALCQRHTG 256

Query: 250 QTPG 253
            +P 
Sbjct: 257 MSPK 260


>UniRef50_C0YKZ5 AraC family transcriptional regulator n=1 Tax=Chryseobacterium
           gleum ATCC 35910 RepID=C0YKZ5_9FLAO
          Length = 260

 Score =  196 bits (500), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 110/252 (43%), Gaps = 7/252 (2%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
           + D   +    +       +     H H+KGQL+    G    T+E  ++++P  +AVWI
Sbjct: 8   KIDELKKPYFVWFEENWVHDDVF--HHHQKGQLVYVESGFQYITIEEKIYLLPQNHAVWI 65

Query: 71  PGGVEHSNQVTAN-AELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTTQRAE 128
           P    H     +   +L  +F + S             + P+ +E+I      +    ++
Sbjct: 66  PPNAVHKTNSHSEKIKLMIMFADISTDNPFYHEISVFSVPPVLKEMIKYSEKWSKLMISD 125

Query: 129 PMTRRLIQVLFDELPQQ--PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAM 186
                 ++ LF+ELPQ       LH+ +    ++  ++E +    +    +   +    +
Sbjct: 126 YNETLFLKTLFNELPQFVKHSLTLHICLPKDKRLTKVIEHLHSHYLNEIKMEDLSDAAFL 185

Query: 187 SERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKG-DTVQKVAHTLGYDSTTAFITMFK 245
           S R L R+  KETGL+  +++Q L++I +L+ L  G  T+ + A+ +GY S  AF   F+
Sbjct: 186 SFRTLERIFKKETGLTLSKYQQMLRIIKSLELLSSGTLTISETAYEVGYKSVQAFTRSFQ 245

Query: 246 KGLGQTPGRYIA 257
             +   P  +I 
Sbjct: 246 AVMQFRPTDFIK 257


>UniRef50_B0TZR0 Transcriptional regulator, AraC family n=1 Tax=Francisella
           philomiragia subsp. philomiragia ATCC 25017
           RepID=B0TZR0_FRAP2
          Length = 264

 Score =  196 bits (500), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 81/264 (30%), Positives = 132/264 (50%), Gaps = 2/264 (0%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           M   L  + ++   +  A +            S  H H + QLIL   G I   VE  +W
Sbjct: 1   MQDTLTTD-FDLSSYPNALIVLKSQIKDCNEESEYHSHSEAQLILPTKGLIQSNVEAKIW 59

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS-AVTMPTTCCTLKISPLCRELILTLA 119
            VP   A+WIP  V HSN +T   ++C  F++    V MP   C L ISPL +ELIL L+
Sbjct: 60  AVPLGSALWIPSYVYHSNLITKGGQMCMTFVDKLMLVNMPKKACVLYISPLIKELILYLS 119

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
            +T  ++     +++  VL D+L +      +  + S   ++ +       P ++  +  
Sbjct: 120 QQTVLEQLNYENQKIASVLIDQLSKMLPTFYNFSLPSEKILQEVAFQWLSKPTKYKYISD 179

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
            A   ++S + LAR I K+ G++F  W++QL +++ALQ L +G +V  V+  LGY+ST+ 
Sbjct: 180 MAYECSVSSKTLARKIKKDIGMNFSDWKKQLHIVVALQKLYEGYSVNWVSEYLGYESTST 239

Query: 240 FITMFKKGLGQTPGRYIARLTTVS 263
           F+T FK+    +P RY+      S
Sbjct: 240 FVTFFKRIFKCSPKRYVKNYCQNS 263


>UniRef50_Q28KW4 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1
           RepID=Q28KW4_JANSC
          Length = 253

 Score =  195 bits (496), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 3/233 (1%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
               V++          S  H H + Q+I ++ G +    E   W VP  + + +P G+ 
Sbjct: 14  PYEVVSYRKTYE-SGYRSDWHSHPRHQIIYSVSGLMMTDTEGVRWAVPSGFGLIVPAGIA 72

Query: 76  HSNQVTANAELCFLFIEPSAV--TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRR 133
           H+ ++  +  +  L++ PS+   +   +C  + IS +   LI  L       R       
Sbjct: 73  HTTKMIGDVSIETLYVSPSSRGRSAFESCRVVSISAMLASLISELCREELRDRNSRKAFH 132

Query: 134 LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193
           L Q++F EL   P   L +     P++R + + +   P     + QWA     S R+  R
Sbjct: 133 LRQLIFLELSDAPTSHLAVKYPVDPQLRRVCDALIADPANSWTIDQWAFEIGKSRRSFTR 192

Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKK 246
               +T  +FRQW Q+L+  +ALQ   +G +++++A  LGY S  +   M +K
Sbjct: 193 AFYSQTDQTFRQWTQRLRCQLALQKRAEGQSLERIARDLGYGSRYSLEAMMQK 245


>UniRef50_C8QA12 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b
           RepID=C8QA12_9ENTR
          Length = 282

 Score =  195 bits (496), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 4/246 (1%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           P+     AV+       +  T   H+H  GQL     G +T    + ++  PP+   W+P
Sbjct: 27  PNAPKVIAVSLSKELARERHT---HRHAAGQLYCLKQGLMTVNTPSGIFANPPRLVGWVP 83

Query: 72  GGVEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPM 130
              EH+       +   + I+   A  +P     +    +   L   LA  T        
Sbjct: 84  PHFEHAIVGPGQVQGWTVLIDEVLAAPLPDHPVLMSCPAVLELLAERLATLTPALWGSER 143

Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190
             RL QV  DEL +   Q L LP+   P++  +  ++   P +     + A +   S R+
Sbjct: 144 YHRLGQVFLDELYEATVQPLTLPLPEDPRLLQIARLLIDSPSDMRTGPELARWAGFSPRS 203

Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250
           L+R     TG+S  ++RQ  +L+ +L+GL  G++VQ+VA  +G+++ +++I+ F+   G 
Sbjct: 204 LSRHWASATGMSLTKYRQTSRLLKSLEGLAAGNSVQQVAWQVGFENVSSYISAFRHAFGS 263

Query: 251 TPGRYI 256
           TPG+Y 
Sbjct: 264 TPGKYF 269


>UniRef50_B5I4G1 AraC-family transcriptional regulator n=1 Tax=Streptomyces sviceus
           ATCC 29083 RepID=B5I4G1_9ACTO
          Length = 268

 Score =  194 bits (495), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 2/226 (0%)

Query: 28  TDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELC 87
                   H H  GQL  A  GA+    +   W+ P    +W+P    HS++     ++ 
Sbjct: 29  AHGAEVAAHFHDYGQLRYAARGALVTATQVGTWVTPASRIMWVPPFAVHSSKAYGETDIR 88

Query: 88  FLFIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146
            L +  +    +P        S L RE  L L +        P  R LI V+  EL +  
Sbjct: 89  VLSLPVTLTGQLPAEPSVFVASALLREAYLALMSEG-EPLESPRARLLIDVVLAELARAA 147

Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206
           Q+ L LP  S  +++ + +++   P     L +       SER L+RL   E  +SF QW
Sbjct: 148 QEPLRLPEPSDRRLKAVTDLLHMDPASPATLAELGHRAGASERTLSRLFGSELSMSFHQW 207

Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTP 252
           R  L++  AL  L  G +V   A  LG+ + ++FI  F + +GQTP
Sbjct: 208 RTLLRIQRALIELSDGASVTATAIRLGWSNPSSFIDAFTELVGQTP 253


>UniRef50_A8L421 Transcriptional regulator, AraC family n=12 Tax=Actinomycetales
           RepID=A8L421_FRASN
          Length = 290

 Score =  194 bits (494), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 6/250 (2%)

Query: 19  AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78
           A+        + L +  H H   Q+  A+ G +      A +++PPQ A WIP G+EH  
Sbjct: 28  ALGGSYLYEGERLVTGWHSHDLHQIEYAVAGVVEVETATAHYLLPPQQAAWIPAGLEHQA 87

Query: 79  QVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQ-RAEPMTRRLIQ 136
            +        +  +P  V  P      L ++PL RE+++        +   +P+     Q
Sbjct: 88  TMNTAVRTVSVMFDPRLVPHPGDRARILAVAPLIREMMIYALRWPIARAEHDPVADGFFQ 147

Query: 137 VLFDELPQQ--PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARL 194
            L   + +    +  L LP S+ P +   +        +   +G+ +    +SER L R 
Sbjct: 148 TLGHLVSEALDHEAPLSLPTSTDPIVSAAMAYTQNHL-DSVTVGEVSRAVGVSERTLRRQ 206

Query: 195 IVKETGLSFRQWRQQLQLIMALQGLV-KGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPG 253
                GLS+R +  Q +L+ A+      G +V +V+  +G+D+ +AF   F +  G+TP 
Sbjct: 207 FRSTLGLSWRSYLLQARLLRAMALFAVPGQSVLEVSTAVGFDNGSAFARAFSQYCGETPS 266

Query: 254 RYIARLTTVS 263
            Y  R++   
Sbjct: 267 SYQRRISAAP 276


>UniRef50_B9K583 Transcriptional regulator n=3 Tax=Alphaproteobacteria
           RepID=B9K583_AGRVS
          Length = 251

 Score =  193 bits (492), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 63/248 (25%), Positives = 106/248 (42%), Gaps = 9/248 (3%)

Query: 15  HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGV 74
                  F           P+H H + QL  A  G +    E   W+VP Q AVWIP  V
Sbjct: 1   MPRHPFTFQRGFKQRGEGLPIHAHDEAQLTFAASGMVQVHTEEGRWLVPSQLAVWIPARV 60

Query: 75  EHSNQVTANAELCFLFIEPSAVTMPTTCC------TLKISPLCRELILTLANRTTTQRAE 128
            H   V  +A+L  +  EPSA               L+++PL + L+        ++   
Sbjct: 61  PHRVDVLTDADLWMVHWEPSAAQEWAPPVPLDQTFALRVTPLMQSLLEAAFMADVSREKG 120

Query: 129 PMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSE 188
            +  +L+     EL         LP+ +      + +M         ++ ++A   A S 
Sbjct: 121 ELVAKLM---LHELTSTAHAPTFLPLPTSTIGLRVADMALTDHQSLMSIDEFASRAATSV 177

Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGL 248
           R L+RL   ETGL+F+ WRQ+ +++ ++  L KG  + +VA   G+ S  +F   F++  
Sbjct: 178 RTLSRLFPSETGLTFKAWRQRARIVQSMDLLAKGKPIARVAADFGFSSAASFSHAFRQVT 237

Query: 249 GQTPGRYI 256
             TP +++
Sbjct: 238 AMTPTQFM 245


>UniRef50_A6SYJ9 Transcriptional regulator, AraC family n=2 Tax=Oxalobacteraceae
           RepID=A6SYJ9_JANMA
          Length = 249

 Score =  193 bits (491), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 65/252 (25%), Positives = 117/252 (46%), Gaps = 10/252 (3%)

Query: 20  VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79
           +              +H HR+ QL+ A  G +  T     W+VPP  AVW+P G+EH+  
Sbjct: 1   MTIGARFYPRGTRLGLHVHREAQLLFASSGVMQVTTPKGHWLVPPARAVWLPPGIEHAVD 60

Query: 80  VTANAELCFLFIEPSAVTMPTTCCTLK------ISPLCRELILTLANRTTTQRAEPMTRR 133
           + A+ E+  L I+P  +        L+      + PL RE IL      +  +       
Sbjct: 61  MLADIEMRALLIQPEQLAQHPAAPRLQSEFVATVGPLLRETILGAFKADSHPQ---RLAL 117

Query: 134 LIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLAR 193
           L+++   EL +    +  +P+    + R + +M+   P     L   A     S R + R
Sbjct: 118 LLELALFELVEDEDARTFMPMPHDARARRVADMILADPANGSELELLAYSAGASARTITR 177

Query: 194 LIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTP 252
           L   ET L+F++WRQ+ +++ A++ L  G  +++++A  LG+ S  +F   F++ +G TP
Sbjct: 178 LFPAETNLTFKEWRQRARIMAAVEALGNGQTSIKQLALQLGFSSVASFGHAFRQIMGMTP 237

Query: 253 GRYIARLTTVSP 264
              + R  + +P
Sbjct: 238 SEMMRRSESAAP 249


>UniRef50_D0J7V7 Transcriptional regulator, AraC family n=6 Tax=Proteobacteria
           RepID=D0J7V7_COMTE
          Length = 271

 Score =  193 bits (491), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 1/248 (0%)

Query: 19  AVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSN 78
            V             P H H +G LI A  G +     +  W+VPP  AVW+  G+ H  
Sbjct: 24  PVTGVEQRYPPGHVVPQHSHARGHLIYASEGVLLVESPSGQWLVPPTTAVWLRPGMLHQI 83

Query: 79  QVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQV 137
             T       LF++ +    +P     L ++PL REL+  L          P    L  +
Sbjct: 84  TATTAVRAYGLFVDEAWSAQLPARDGVLHVAPLVRELMTALVALPHEGPHRPRDALLGSL 143

Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197
           L +EL        +LP      +R + E M   P +   +   A   A++ + L R  +K
Sbjct: 144 LLEELSALAPLPYYLPWPQDALMRRICESMLSAPAQRTTVEALARQHALTPKTLHRRFLK 203

Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
            TG+++ +W QQ++L+ ++  L++G  +  VA   GY+S +A+   F++  G+ P  ++A
Sbjct: 204 STGMNWGRWYQQMRLMASIPQLLQGMAITTVALESGYESHSAYSAAFRRQFGRPPSEFVA 263

Query: 258 RLTTVSPQ 265
                +  
Sbjct: 264 SAGRATRP 271


>UniRef50_C3JLV5 AraC-family transcriptional regulator n=2 Tax=Rhodococcus
           erythropolis RepID=C3JLV5_RHOER
          Length = 268

 Score =  191 bits (487), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 6/228 (2%)

Query: 31  LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLF 90
                H+H + Q+     G +       +W +  ++ VW+PG V H   + +   +   +
Sbjct: 38  TAYGAHRHPEHQIAWMSEGTMQIAAGGNVWHLHSEHLVWLPGTVLHDMTLLSAGCMIAAY 97

Query: 91  IEPSAVTM---PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQ 147
             P         T    L++  L  +L+  LA+RT     +       ++L+D L   P+
Sbjct: 98  ARPDLRPGGPRWTQPLVLEVDALSAQLLRHLADRTID---DARRLMSQELLYDILAAAPE 154

Query: 148 QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWR 207
           +   L V  +    ++   +   P +   LG+WAG   +S + L R  V +TG++F QWR
Sbjct: 155 RHDVLAVPRNAAASSVSARILADPADSRTLGEWAGELGVSSKTLMRAFVADTGITFGQWR 214

Query: 208 QQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            + ++  +L+ L +G+ V  VA  +GY +++ FI  F++  G TP RY
Sbjct: 215 TRARMYASLEMLARGEGVNDVAPQVGYRTSSGFIAAFRETFGTTPARY 262


>UniRef50_C3JVD6 Transcriptional regulator, AraC family n=3 Tax=Rhodococcus
           RepID=C3JVD6_RHOER
          Length = 277

 Score =  191 bits (486), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 63/258 (24%), Positives = 113/258 (43%), Gaps = 6/258 (2%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDE-LTSPVHQHRKGQLILALHGAITCTVENALW 60
           +  L ++ +E D   E  V +   +  D+ +T   H HR  +++    G +       +W
Sbjct: 20  IDELVVSEHELDDEPEDLVLWGGASSADQPVTWETHAHRSNEILFPRSGIVVVRSGAQMW 79

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEP-SAVTMPTTCCTLKISPLCRELILTLA 119
            + P   +WIP    HS +V A A+   ++       ++      +  +PL  EL+L L+
Sbjct: 80  TLLPGRGLWIPALHRHSVRVAAGAQFLTVYCAVGQGPSLGDHPVAVHGTPLLYELLLHLS 139

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
            R  +  A     R   V FD L     ++  + +     +  +   +   P +  + G 
Sbjct: 140 AREMSDDARRRAER---VFFD-LVVPGDERGAMKIPDSGPVGRIARDLLSHPEDPRSFGD 195

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
           WA    +S   LAR    +TG+SF QWR  L++ +A+  L +   V  VA  +GY + ++
Sbjct: 196 WANEIGVSTSTLARRFKVDTGVSFGQWRVLLRMNVAMSLLGQDVAVADVAEQVGYSTPSS 255

Query: 240 FITMFKKGLGQTPGRYIA 257
           F+  FK+  G TP  +  
Sbjct: 256 FVAAFKQSTGVTPMAFRK 273


>UniRef50_D1BBW6 DNA-binding domain-containing protein, AraC-type n=1
           Tax=Sanguibacter keddieii DSM 10542 RepID=D1BBW6_SANKS
          Length = 257

 Score =  191 bits (486), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 56/250 (22%), Positives = 99/250 (39%), Gaps = 4/250 (1%)

Query: 9   GYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAV 68
            +             +    +        H + +L+     AIT      +W+VPP   +
Sbjct: 3   EHRQVLPPWMLSTLVVDPAAEAREWVSAVHHEHELLWCAGRAITVEARGQVWLVPPTLGI 62

Query: 69  WIPGGVEHSNQVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRA 127
           W+P G  H      +A +   +++ S  V    +   + ++PL  EL+L           
Sbjct: 63  WLPAGTVHRVTAHPDASVFAAYLDTSREVPGWDSILGVPVTPLLHELLLH---NRRAAMP 119

Query: 128 EPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187
           +     L  +  +++       + L +     +R + E +   P +  +L  WA    MS
Sbjct: 120 DASRHALQALAVEQMVPLTAATIELRLPRDLALRGVAEQVVADPGDGRSLDAWASSIGMS 179

Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKG 247
            R   R  + +TG +F QWR   ++  AL  L +G  V  VA  +GY ST  F+ +F++ 
Sbjct: 180 PRTFMRRFLDDTGSTFAQWRILARVAAALTMLAEGRAVATVARAVGYSSTGTFVALFRRT 239

Query: 248 LGQTPGRYIA 257
            G TP  Y  
Sbjct: 240 TGMTPAAYSR 249


>UniRef50_C0YJ90 AraC family transcriptional regulator n=1 Tax=Chryseobacterium
           gleum ATCC 35910 RepID=C0YJ90_9FLAO
          Length = 270

 Score =  190 bits (484), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 9/258 (3%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           PD   +    F +H  +++L  P H+H KGQL     G    T++N  ++VP ++  WIP
Sbjct: 8   PDIDKDDKSVFVMHEKSEKL-IPFHKHTKGQLSYVEGGIAYITIDNKTYVVPARHFFWIP 66

Query: 72  GGVEHSNQV-TANAELCFLFI---EPSAVTMPTTCCTLKISPLCRELILTLANRTTTQ-R 126
            G+EH  ++      L  L+    +  +    +       S L  ++I            
Sbjct: 67  QGMEHILEIGHTATVLRSLYFYAHDDISDPFYSRLGIYPASELLIQMIKYTEIWDEKHVT 126

Query: 127 AEPMTRRLIQVLFDELPQQPQQQLH--LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184
           A+      +  L   LP+  QQ L   LP + H ++  +V  +     E   L   +  F
Sbjct: 127 AKDENFEFLVALKKILPKTHQQPLPIILPATHHKQMMKIVSYLEWNIGERLTLAHVSSKF 186

Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITM 243
            +SER+L+RL   +  +SF Q+ + L+++ A++ L+  D  + ++A  +GY S +AF   
Sbjct: 187 GLSERSLSRLFKADMDISFLQYLKTLRIVKAIELLLNTDKPINEIADDVGYSSISAFSDT 246

Query: 244 FKKGLGQTPGRYIARLTT 261
           F +     P         
Sbjct: 247 FHEFTQSRPSDLRKSNKA 264


>UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacterium rectale ATCC
           33656 RepID=C4ZGK8_EUBR3
          Length = 285

 Score =  190 bits (483), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 58/285 (20%), Positives = 109/285 (38%), Gaps = 28/285 (9%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           M+  LN           + V   I+A  ++   P+H H   ++I+ L G  T  + + L 
Sbjct: 1   MIENLNGIHETVKYKEYSNVKLFINAEAED--YPIHWHTPMEIIMPLEGGYTVQIGDDLV 58

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT--------MPTTCCTLKISP--- 109
            +     ++I  GV+H        +   L IE SAV+        +      + ++P   
Sbjct: 59  HLNENDIIFIASGVKHRLIAPDTGKRLILQIEWSAVSKIKELNSILTLIAPAITLTPETS 118

Query: 110 -----LCRELILTLANRTTTQR---AEPMTRRLIQVLFDELPQQPQQQLHLPVSSH---- 157
                  R+L+L ++N   T        +  ++++VL            H  V  H    
Sbjct: 119 GDIHSNIRKLLLDISNEYQTDSFLSEAVIYSKILEVLVLIGRHHTASSCHFNVGRHKQQE 178

Query: 158 --PKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMA 215
              +  ++ E +     E   L + A     S+ +  RL  + T  +F ++  Q ++ +A
Sbjct: 179 YLERFLSICEYIDTHCTEDITLDEIAKIAGFSKYHFTRLFKQFTNNTFYKYLNQKRIELA 238

Query: 216 LQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
           L  L     +V + A   G+ + + FI +FK   G TP  +    
Sbjct: 239 LTLLADPNISVTETAMQSGFANPSTFIRVFKTEKGCTPTEFRKMF 283


>UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM
           15702 RepID=B0MKI2_9FIRM
          Length = 284

 Score =  189 bits (481), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 91/283 (32%), Gaps = 27/283 (9%)

Query: 2   MHRLNLNGYEPDRHHE-AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           M  +           E     + +           H H + ++I    G     ++    
Sbjct: 1   MKYIEYREKREHGTREFPYACYRVTENFPRYNMIPHWHNECEIIYVRSGYFELFLDGHTH 60

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLC--------- 111
            +       I GG  H      N     L  + +A+   +  CTL + P+          
Sbjct: 61  RIDAGCCSLIIGGSMHGGTPKDNCRYDCLVFDMAALLKSSQICTLHLQPIINHERRFITF 120

Query: 112 -----------RELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSH--- 157
                      + +I  +  +        +  RL+ +L   + +Q   Q     +S    
Sbjct: 121 FSADSEPAKDAKAVIDAMLEKEPGYE-FTVPGRLLCMLGHIVARQEHYQSGETAASDIKK 179

Query: 158 -PKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMAL 216
             + + ++  + +   +   L + A    M+     R   + TG +  ++    ++  A 
Sbjct: 180 VRRFKNVISYIEQNYRKNITLEELANECGMNRNYFCRAFKEYTGKTPVEYLNYFRIESAC 239

Query: 217 QGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           + +   D  +  +A   G++  + FI +FK   G TP  Y  R
Sbjct: 240 ELIASTDEKLIDIAMKCGFNDYSYFIKVFKSMKGVTPRDYCRR 282


>UniRef50_D1BHF8 DNA-binding domain-containing protein, AraC-type n=1
           Tax=Sanguibacter keddieii DSM 10542 RepID=D1BHF8_SANKS
          Length = 309

 Score =  189 bits (480), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 9/245 (3%)

Query: 30  ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89
           E+T P H+H + +L+    G+ +   +   W +PP  AVW+P GV ++    A + +   
Sbjct: 43  EVTWPAHEHAESELLWCASGSASLEADGRRWTIPPSLAVWVPAGVRNAAGAAAGSLVRAT 102

Query: 90  FIEPSAVTM---PTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQP 146
           F + +A  +   P     + ++   R L++    R      +   RRL +V+ D L   P
Sbjct: 103 FFDVAATRLVDVPDVVTGVAMTDAVRVLLMHNHLRDLD---DAARRRLHRVVLDLLVPVP 159

Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206
            +   L +     +R + E +   P +     +WA    +  R LAR    ETG++F +W
Sbjct: 160 HESFDLLLPRTGHLRWVAESILADPGDRRTTEEWASRCGLHPRTLARQFHAETGVTFTRW 219

Query: 207 RQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQS 266
           R   ++  A++ L  G  V  V+  +GY S +AF+  F++  GQTP  Y+ R    +P  
Sbjct: 220 RILARMQWAIRELALGAPVLAVSRQVGYRSPSAFLAHFRELTGQTPTAYVGR---PAPVV 276

Query: 267 AKPDP 271
            +P P
Sbjct: 277 DEPGP 281


>UniRef50_A6ED21 Transcriptional regulator, AraC family protein n=1 Tax=Pedobacter
           sp. BAL39 RepID=A6ED21_9SPHI
          Length = 271

 Score =  188 bits (479), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 103/253 (40%), Gaps = 10/253 (3%)

Query: 10  YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69
           +  D H E    +  H+  ++     H H+KGQL     G I        + +P ++ VW
Sbjct: 11  FNLDEHTE--TTYVWHSKFEDR-FKDHHHKKGQLTYVEGGVIFLYTREQSYFIPARHYVW 67

Query: 70  IPGGVEHSNQVT-ANAELCFLFIEPSAV---TMPTTCCTLKISPLCRELILTLANRTTTQ 125
           +P GV H  +    +  +  ++         +         ++ L  E++    N     
Sbjct: 68  VPAGVTHHLEHRYRSTIVRNVYFNAKNEIDHSFFDHIGIYPVNDLLLEMLKFSENWNGNI 127

Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLH--LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183
                    ++ L   LP   +  L   +P + + ++R ++  + +   E   L + A  
Sbjct: 128 YPGSFEYGFLETLKSILPAISKHPLPIVVPTTDNERLRPVLWYIRQHLSEELTLEKIALE 187

Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQ-GLVKGDTVQKVAHTLGYDSTTAFIT 242
              SER L+RL       SF Q+ + +++  A++  L    TV ++A+ +GYDS  AF  
Sbjct: 188 TGFSERTLSRLFQASLKTSFFQYLKLVRMTRAMEKLLETDRTVTEIAYEVGYDSIAAFSN 247

Query: 243 MFKKGLGQTPGRY 255
            F K  GQ P  +
Sbjct: 248 TFYKMTGQRPSAF 260


>UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi
           DSM 13479 RepID=UPI0001C353D2
          Length = 286

 Score =  188 bits (477), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 41/282 (14%), Positives = 82/282 (29%), Gaps = 27/282 (9%)

Query: 2   MHRLNLNGYEPDRH-HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           MH +     +        A  + +     +   P H H + +LI  + G    T+     
Sbjct: 1   MHYIKYKEIKHHGTADFPAGYYHVTESHPQYAMPYHWHEELELIHIISGTFHVTINETTR 60

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAV-----------TMPTTCCTLK--- 106
              P   + +  G  H      +     L    S +            +      L    
Sbjct: 61  NAVPGDILLVNSGGLHGGTPY-DCVYECLVFPVSLLSSQTYASEFLNRLDRQDLILDEYF 119

Query: 107 ---ISPLCRELILTLANRTTTQRAEPMTRRL------IQVLFDELPQQPQQQLHLPVSSH 157
                     L+  L             + L      + +L  +       +  L    +
Sbjct: 120 PAGDDTAIHSLLERLFALMQDSDEGGKLQCLGLLYQFMGLLLQDRRYTASDKSDLSTHRN 179

Query: 158 PKIRT-MVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMAL 216
             +   ++  +     E   L + A    MS +       + TG +   +    ++  A 
Sbjct: 180 IYLLKNVLNYIEAHYTEKITLHELARTAGMSSKYFCHFFSEMTGRTPIDYVNYYRVERAC 239

Query: 217 QGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
             L   G ++  +A   G++  + F   FKK  G +PG+Y+ 
Sbjct: 240 CLLAGIGHSITDIAMLCGFNDVSYFTRAFKKYKGISPGQYLK 281


>UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostridiales
           RepID=A7VID9_9CLOT
          Length = 289

 Score =  188 bits (477), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 50/281 (17%), Positives = 99/281 (35%), Gaps = 27/281 (9%)

Query: 5   LNLNGYEPDRH-HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63
             L   +P     +    + I         PVH H + ++I    G +T  +    ++  
Sbjct: 3   FELKENKPHGTKDDPFSTYHIENAGQSFQIPVHWHDEFEIIYVKSGFLTVNISGENYIGK 62

Query: 64  PQYAVWIPGGVEHSNQV-TANAELCFLFIE------------PSAVTMPTTCCTLKISPL 110
           P  A  +  G  H     T   +                      +  P     L ISP 
Sbjct: 63  PGDAFVVSPGNLHFMGSKTGTVDYFTFLFPLKYISFYTDDILDDRLLEPLDSGRLMISPS 122

Query: 111 CRELILTLANRTTTQRAEPMTRRLIQ---------VLFDELPQQPQQQLHLPVSSHPKI- 160
            ++ I  L  +         + R +          +L   + +  ++   +  ++  +  
Sbjct: 123 VKDTIKELCEQLIEIYEAKKSERELNITTQIKTKIILLQFILEMWEKGFIVENNTSGRNI 182

Query: 161 --RTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQG 218
             + MV  + +      +L ++   F +SE+ ++R   +   ++  Q+   L+L  A Q 
Sbjct: 183 VEKEMVSYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYVAYLRLEYAKQL 242

Query: 219 LVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
           L   D +V + A   GY + + FI  FKK  G +P +Y  +
Sbjct: 243 LQDTDISVTEAAMRSGYQNISYFIRSFKKTYGVSPLKYRKK 283


>UniRef50_A8LCQ9 Transcriptional regulator, AraC family n=1 Tax=Frankia sp. EAN1pec
           RepID=A8LCQ9_FRASN
          Length = 270

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 64/263 (24%), Positives = 110/263 (41%), Gaps = 11/263 (4%)

Query: 9   GYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAV 68
            + P R      A  +    DEL S  H+H   ++  A+ G          +++PP YA 
Sbjct: 2   PFLPMRRCVTVGAGTVEHRADELISYWHRHDLHEVEYAVSGLAEIRTPTTHYLMPPSYAA 61

Query: 69  WIPGGVEHSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRT----- 122
           W+P GVEHS     N     +F +P+    P +    + + P+ RE++            
Sbjct: 62  WVPAGVEHSPL-LRNVTTIAVFFDPAVFDFPYSRAAVIPVPPVLREMMRYATRWPIGRGE 120

Query: 123 TTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAG 182
               A+   R L  V+  +L    +  L LP +  P +R ++        E     +   
Sbjct: 121 DDAEADTFFRALAAVVRGQLAH--EAPLSLPTADDPVVRDVMAYTTDHLAE-VTAARVCR 177

Query: 183 FFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFI 241
              +SER L R      G S+R++ +Q++LI A+  L     +V ++A  +G+ S +A  
Sbjct: 178 AVGISERVLRRRFAAVLGQSWREYLRQVRLIRAMALLSTPTTSVGEIATEVGFGSASALA 237

Query: 242 TMFKKGLGQTPGRYIARLTTVSP 264
             F+   G++P  Y  R  T + 
Sbjct: 238 RAFRAWTGESPSAYRDRWLTTAA 260


>UniRef50_Q7NRR7 Probable transcriptional regulator n=1 Tax=Chromobacterium
           violaceum RepID=Q7NRR7_CHRVO
          Length = 250

 Score =  187 bits (475), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 61/226 (26%), Positives = 94/226 (41%), Gaps = 2/226 (0%)

Query: 33  SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92
           +  H H  GQLI    GA+ C  E   W++      WIP GV HS +  A       + +
Sbjct: 21  TASHVHAVGQLIYLRRGAMLCQSETMRWLMAAGQVGWIPAGVAHSAEPLAELYGVTAYAD 80

Query: 93  -PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH 151
             +   +P     +    L   L+L    R   +      +RL   + DEL Q       
Sbjct: 81  SAAYPDLPAEVRVMPAGGLM-GLLLERQLRYEAEPWPGRRQRLAGAIVDELLQLVPLPQQ 139

Query: 152 LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQ 211
           LP+ +  ++R +   +         L + A     S  +L R   +ETG+SF  W  Q +
Sbjct: 140 LPLPAERRLRALCRRVLADLGRGWLLDELAVAHGFSRASLTRAFARETGVSFGHWLAQAR 199

Query: 212 LIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
           L+ A++ L  G  V + A  +GY S +AF   F++ LG  PG    
Sbjct: 200 LLEAVRLLSGGAMVGETALQVGYQSPSAFCAAFRRHLGMAPGELQR 245


>UniRef50_UPI000050FCF9 AraC family transcriptional regulator n=1 Tax=Brevibacterium linens
           BL2 RepID=UPI000050FCF9
          Length = 272

 Score =  187 bits (475), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 59/232 (25%), Positives = 96/232 (41%), Gaps = 4/232 (1%)

Query: 25  HAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANA 84
            A   E     H H   +L+    G  T T++   W + P   +WIP GV HS    A  
Sbjct: 41  EAMEHETYWSEHSHPTHELLWREAGVGTVTIDQRTWTITPPLGMWIPAGVRHSGWTPAGV 100

Query: 85  ELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQ 144
            +           +      + I+PL       L +R         +  L + +  ++  
Sbjct: 101 VVYAAQFSLDNPLVSDRPTAIAITPLL----RLLLDRLQHTDPGTSSYSLTEAMILDVMT 156

Query: 145 QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFR 204
               +L L + S+P I  +   + +GP +  +L  WA    +S R + R    ETGL F 
Sbjct: 157 PADNELLLHMPSNPLIAPIANAIIEGPADASSLQDWARKLGISGRTITRAFEAETGLGFG 216

Query: 205 QWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           +W    ++  A+  +  G  V + A  +GY S +AF T FK+  G TPG++ 
Sbjct: 217 RWATTARVQHAVSMISLGGEVDEAAAGVGYRSVSAFTTAFKRITGTTPGQFR 268


>UniRef50_A5VF29 Transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria
           RepID=A5VF29_SPHWW
          Length = 274

 Score =  186 bits (474), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 68/252 (26%), Positives = 104/252 (41%), Gaps = 6/252 (2%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
             +   F        ++   H H   QLI A+ G I    + A  ++P   A WIP G  
Sbjct: 20  RPSGQGFSFRDPERAISYDWHDHPYHQLIYAVAGTIQIETDAARHLLPTGRAAWIPAGQR 79

Query: 76  HSNQVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTT-QRAEPMTRR 133
           H   V  + +   L+  P A          L  SP+ RE+IL            +P+ R 
Sbjct: 80  HRTLVH-DVDTASLYFAPDAVADGGGRVRILVASPVMREMILHALRWPQAVAERDPVARS 138

Query: 134 LIQVLFDELPQQ--PQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191
               L     +    +  L LP + HP I   +++ A  P     L       AMSER+ 
Sbjct: 139 FFGTLALMCGEWLESELPLSLPGARHPGIVRAMDLAAVDPA-GIDLPAALAAAAMSERSF 197

Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251
            R   +ETG+ ++ W  QL+++ A+  L  G  V  VA  +GY S +AF   F +  G+ 
Sbjct: 198 RRAFSRETGMGWQAWVAQLRILRAMGMLADGGRVTDVAAEVGYASLSAFAKAFAQLAGEG 257

Query: 252 PGRYIARLTTVS 263
           P  Y +R+   +
Sbjct: 258 PADYRSRVRGRT 269


>UniRef50_Q2NTH9 Putative transcriptional regulator n=1 Tax=Sodalis glossinidius
           str. 'morsitans' RepID=Q2NTH9_SODGM
          Length = 268

 Score =  186 bits (474), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 97/214 (45%), Positives = 130/214 (60%)

Query: 7   LNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQY 66
           L  YEPDR    A A  ++     + +P +QHRKGQLI+ALHG ITC + +AL MVPP  
Sbjct: 8   LTHYEPDRDRNLATAMRLNVVQSAMETPFYQHRKGQLIMALHGGITCELTDALLMVPPHC 67

Query: 67  AVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQR 126
           AVWIP    HSN  T NA  CF+F+EP    +    CTL ISPL ++LIL LA       
Sbjct: 68  AVWIPADTPHSNHATVNARFCFVFVEPIFPGLLARSCTLFISPLLQQLILHLAELPGDYA 127

Query: 127 AEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAM 186
            +  T RL  V+ ++L   P++ L LP SSHP+IR + + +   P E   L  WA    M
Sbjct: 128 LDLPTGRLAVVMLEQLANMPEENLSLPFSSHPRIRRITDTLNHSPAERRTLPAWASLVGM 187

Query: 187 SERNLARLIVKETGLSFRQWRQQLQLIMALQGLV 220
           +ER+LARL +KETG++F   RQ+LQLI++++ L 
Sbjct: 188 NERSLARLFIKETGMTFGCRRQRLQLIISIRELA 221


>UniRef50_C7PA31 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga
           pinensis DSM 2588 RepID=C7PA31_CHIPD
          Length = 264

 Score =  186 bits (473), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 58/264 (21%), Positives = 106/264 (40%), Gaps = 11/264 (4%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           MH L     E D H ++           E    +H H KGQL     G   C + +  ++
Sbjct: 1   MHLLADYLNEIDVHPDSVYVMH---EKVERKFSMHSHIKGQLTYVEGGIAFCNMPDKSYV 57

Query: 62  VPPQYAVWIPGGVEHSNQVTAN--AELCFLFI---EPSAVTMPTTCCTLKISPLCRELIL 116
           +P ++ +WIP   EH  Q+  +       L+    +              ++ L  E+I 
Sbjct: 58  IPARHYIWIPKQQEHYMQIRHSKSTTTRNLYFYSQDDHLTPFYNKLGIYPVNDLLLEMIN 117

Query: 117 TLANRTTTQRAEPMTRRLIQVLFDELP--QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEW 174
             A             R +  + D LP        + LP + H ++R +++ +A+   + 
Sbjct: 118 YSARWERHVLPGDPGFRFLSSIKDILPDISTSALPVALPTTQHERLRPVLQYIAQSFDQQ 177

Query: 175 GALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQG-LVKGDTVQKVAHTLG 233
             L   +  F +S R L+RL      +SF Q+ Q L+++  ++  L    T+ ++A+  G
Sbjct: 178 LTLESVSSQFDLSPRTLSRLFTNILDMSFVQYLQTLRVVRGIEMILQTNQTLSEIAYQTG 237

Query: 234 YDSTTAFITMFKKGLGQTPGRYIA 257
           Y S  AF  +F +   + P  +  
Sbjct: 238 YSSIAAFSKVFYQLTNKRPSSFQQ 261


>UniRef50_Q7UTW3 Transcription regulator n=1 Tax=Rhodopirellula baltica
           RepID=Q7UTW3_RHOBA
          Length = 275

 Score =  186 bits (472), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 91/276 (32%), Gaps = 16/276 (5%)

Query: 1   MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           M   L +  ++     +  +       + + T P H H + +L ++  G  T       +
Sbjct: 1   MASGLTVKHFKVRGSADDGITVH-QWESVDHTWPNHSHPEYKLGVSEGGTGTFFNRGQRY 59

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTT-------------CCTLKI 107
              P   + I     HS   T       L+  P+ V                     +  
Sbjct: 60  FTGPGKLLVIHPNEVHSCTATGAWRY--LYAAPNVVASIVRTFDRNGDIEPLLLPPVIDD 117

Query: 108 SPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMM 167
           + L   ++                    + + + L +               IR + E +
Sbjct: 118 TQLVELVLQAHRAMDDGDPQLDQESAFYEAICELLVRHASMPDIPKKRGRANIRRVKESL 177

Query: 168 AKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQK 227
                E  +L + A     S   L+R+  KE G+  + +  Q+++  A Q L+ G+T+  
Sbjct: 178 EAKFRENVSLHELAQLAGTSAPYLSRVFSKEVGIPIQAYLSQIRVRRAQQMLMDGETLSN 237

Query: 228 VAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVS 263
           VA+  G+   + F   FK+ +G  PG Y   +    
Sbjct: 238 VAYAAGFADQSHFTRHFKRFIGVAPGAYSKAVNPSG 273


>UniRef50_A8U313 Helix-turn-helix, AraC type:Arac protein,
           arabinose-binding/dimerisation n=1 Tax=alpha
           proteobacterium BAL199 RepID=A8U313_9PROT
          Length = 282

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 1/268 (0%)

Query: 6   NLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQ 65
             +        + A+     +     + P H+H +GQL L L   +     + +W+VP  
Sbjct: 15  GRDPVSGHVEADVAIIGHAASFAPGASVPWHRHSRGQLALTLARVMRVETPDKVWLVPRG 74

Query: 66  YAVWIPGGVEHSNQVTANAELCFLFIEPSAV-TMPTTCCTLKISPLCRELILTLANRTTT 124
             +W+P    H +       +  L++ P +  ++PT    ++      +++  LA    +
Sbjct: 75  SVLWLPAETPHRSLAPEQRLMRSLYVRPDSAESLPTAPTAVEQGTPLADMVTWLAETYDS 134

Query: 125 QRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFF 184
            R +     +       +   P   + LP  + P +  + + +   P    +L  WA  F
Sbjct: 135 DRLDKAWSTVAGAALALVRPGPGVSIRLPQPADPALAVIADAVLADPAVEISLEDWAERF 194

Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244
            M+ R L R +  ETG+S+R WR+ L L +A + L+ G  V  VA   GY  T+AF+  F
Sbjct: 195 GMAGRTLRRRVQAETGMSYRDWRRILGLTVAAERLLAGSRVTDVAFETGYAGTSAFVAAF 254

Query: 245 KKGLGQTPGRYIARLTTVSPQSAKPDPR 272
           +     TPG +  R       +A    R
Sbjct: 255 RAAFQVTPGEFQRRAALRGRPAAGASGR 282


>UniRef50_Q5WI14 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii
           KSM-K16 RepID=Q5WI14_BACSK
          Length = 275

 Score =  184 bits (468), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 108/253 (42%), Gaps = 16/253 (6%)

Query: 22  FCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT 81
           F   A T E   P+H H   +LI  ++G++    E  +  +  +  ++I   V HS Q  
Sbjct: 19  FIFQARTTERVIPMHFHSNMELIYCINGSLRVWHEGKVTTLMDKDMLFINSNVPHSTQSL 78

Query: 82  ANAELCFLFIEPSAVT-------MPTTCCTL--KISPLCRELILT---LANRTTTQRAEP 129
               +  L+   S          + T+   L  ++    R L++    L   T T     
Sbjct: 79  TENRVLVLYFPKSFFASEQVLIQLNTSEEQLDEQVLSNLRTLLMEIYNLHYSTGTYDYIL 138

Query: 130 MTRRLIQV---LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAM 186
              R+I++   L     Q  +       S   KI+T+++ + +   E  +L + A     
Sbjct: 139 AQSRIIELKYWLARHFSQTAELSPATSRSDRQKIQTILDFIKEHYTENISLAETARICGY 198

Query: 187 SERNLARLIVKETGLSFRQWRQQLQLIMALQGL-VKGDTVQKVAHTLGYDSTTAFITMFK 245
           SE  L+R+  + TG +F +++Q L L  A+  L     ++ ++++  G+ +  +F  +FK
Sbjct: 199 SEAYLSRMFHEYTGQTFTEYKQILCLEKAIDLLDTTNKSLTEISYETGFPNVKSFRKVFK 258

Query: 246 KGLGQTPGRYIAR 258
           + +G+TP  Y   
Sbjct: 259 EVMGKTPYEYKKS 271


>UniRef50_Q28SV1 Transcriptional regulator, AraC family n=1 Tax=Jannaschia sp. CCS1
           RepID=Q28SV1_JANSC
          Length = 252

 Score =  183 bits (466), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 47/225 (20%), Positives = 96/225 (42%), Gaps = 4/225 (1%)

Query: 39  RKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVT- 97
            +  L+ A+ GA+  +V    W++PP +A W+P     S  +      C +   P   T 
Sbjct: 26  DRDYLLYAIRGALRVSVAGESWLLPPSFAAWLPANTPISVDIDKPVTTCSVLARPGLCTG 85

Query: 98  MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHL--PVS 155
           +P   C  ++SP+ R++I    +                 L         + + +  P +
Sbjct: 86  LPEKACVFQMSPMARQMIHYCKDWGPDAAHPAQAEGFFLALLHVCADLAVKSVDVKRPTA 145

Query: 156 SHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMA 215
           + P +R  +++      +     + A    +SER++ R    + G+++ Q   QL++I A
Sbjct: 146 TDPVLRKAIDITEAHLAQAITANEIARKVNLSERSMQRHFQMDVGMTWSQTLTQLRMIHA 205

Query: 216 LQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
           +  L +G  ++ ++A   G+ S +AF   F+     TP ++   L
Sbjct: 206 VALLAEGKLSIIQIAGYTGFQSLSAFNRAFRTFAATTPTKFRKAL 250


>UniRef50_A5EPW3 Transcriptional regulator, AraC family n=3 Tax=Bradyrhizobium
           RepID=A5EPW3_BRASB
          Length = 268

 Score =  183 bits (466), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 65/253 (25%), Positives = 104/253 (41%), Gaps = 11/253 (4%)

Query: 17  EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEH 76
           E  V               H HR+ QLI A  G +  T     W+VPP  AVW+P    H
Sbjct: 19  EPGVHLIARLYHKGARLDPHMHRESQLIYASRGTMQVTTPQGRWLVPPDRAVWVPARHAH 78

Query: 77  SNQVTANAELCFLFIEPSAVTM------PTTCCTLKISPLCRELILTLANRTTTQRAEPM 130
           +  + A++++  L+ E   +              +++SPL  + IL L           +
Sbjct: 79  AIDMLADSQMRTLYFELDWLRQAARGLRLDREFVVQVSPLLHQAILALFAPDGGAERAAL 138

Query: 131 TRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERN 190
             RL      EL +       +P+   P+ R    ++   P     L   A     S R 
Sbjct: 139 LVRLAL---LELRRAEDSSTFIPLPQDPRARRAALLVLASPATEEDLATLASMVGSSART 195

Query: 191 LARLIVKETGLSFRQWRQQLQLIMALQGLVKGD--TVQKVAHTLGYDSTTAFITMFKKGL 248
           L+RL   ET LSF+ W Q+ ++  A++ L      +V+++A  LGY S  AF   F++  
Sbjct: 196 LSRLFAAETRLSFKAWCQRARIAAAIERLSTDRHLSVKQLAADLGYASVPAFSHAFRQVT 255

Query: 249 GQTPGRYIARLTT 261
           G+TP  +  +   
Sbjct: 256 GRTPTDFAEQSGA 268


>UniRef50_A3XQJ9 Probable transcription regulator protein n=1 Tax=Leeuwenhoekiella
           blandensis MED217 RepID=A3XQJ9_9FLAO
          Length = 261

 Score =  183 bits (465), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 54/251 (21%), Positives = 110/251 (43%), Gaps = 9/251 (3%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
           H     +  H+  +E   P+H H+K Q+     G      +N  +  P ++ +WIP G+E
Sbjct: 10  HYPDSIYVHHSKIEEQ-LPMHSHKKHQISYVEGGVAFLNTKNNSFFFPARHFIWIPAGLE 68

Query: 76  HSNQVTANAEL-CFLFIEPSAVTMPT---TCCTLKISPLCRELILTLANRTTTQ-RAEPM 130
           H+     + ++   LF     +             +S L  E+I           R +  
Sbjct: 69  HNVTSRTSVKMVHNLFFPADLIPETEILKKAGIFPVSNLLMEMINYTQRWNGDILRTDAE 128

Query: 131 TRRLIQVLFDELPQQPQQQLH--LPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSE 188
               +  L + + +  +      LP +++  +R +++ +     +   L + A  F  S 
Sbjct: 129 AFEFLIALRNIILEVAKTPFPVVLPTTTNEMLRPILKYIHLNVDQPLYLEEVAAHFGYSA 188

Query: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKG 247
           R+L+RL  K    SF Q+ +  ++I +++ L+K D ++ +VA+  GY+S +AF   F + 
Sbjct: 189 RSLSRLFQKNIETSFLQYVKLTRIIKSIELLLKTDLSISEVAYASGYNSLSAFSYAFNQI 248

Query: 248 LGQTPGRYIAR 258
           + Q+P  +  +
Sbjct: 249 VNQSPAAFKKQ 259


>UniRef50_C6C3E5 Transcriptional regulator, AraC family n=1 Tax=Dickeya dadantii
           Ech703 RepID=C6C3E5_DICDC
          Length = 296

 Score =  183 bits (465), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 55/290 (18%), Positives = 110/290 (37%), Gaps = 26/290 (8%)

Query: 2   MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM 61
           M    L     D       A  +   + +   P+H H   +L++   G       +  + 
Sbjct: 1   MQSRGLKLQTEDYFLTEKNAVTVAERSPQSAFPLHHHDFDELVIVWRGNGLHIWNDVPYR 60

Query: 62  VPPQYAVWIPGGVEHSNQVTANAEL-CFLFIEPSAVTMPTTCCTLKIS------------ 108
           +      ++     HS +     EL   L+I P  +T+PT    L               
Sbjct: 61  ITCGDLFYVTADDRHSYESVHALELDNILYIRP-RLTLPTDWQNLLPDGGVAQQQRYWRL 119

Query: 109 -----PLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLP----VSSHPK 159
                 + R+ + +L       +++P++ +L +VL  ++     +  H P    ++   +
Sbjct: 120 GEQGMAIIRDRVESLTQEC--MKSDPLSLQLSEVLLMQIALLALRYRHAPGETQLADAHQ 177

Query: 160 IRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGL 219
           +  ++  +     +   L  +   +  S R+L     ++TG+S  Q+ +QL+L  A++ L
Sbjct: 178 LDLLMNALRDSIAQPFRLEAFCQQYGFSLRSLRSRFKQQTGMSVSQYLRQLRLCRAMELL 237

Query: 220 V-KGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSAK 268
                T+ +VA   G+D +  F  +F +  G TP  Y  R  T S     
Sbjct: 238 RYDRQTISEVAAQCGFDDSNYFSVVFHQAFGVTPSSYRQRFQTRSVAGTA 287


>UniRef50_Q091X7 Helix-turn-helix, AraC type n=1 Tax=Stigmatella aurantiaca DW4/3-1
           RepID=Q091X7_STIAU
          Length = 279

 Score =  182 bits (464), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 6/254 (2%)

Query: 13  DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72
           +    AA +FC+      LT+  H HR+ QL+ A  GA+   V+ A W++PPQ A W+ G
Sbjct: 7   NVDASAASSFCLTDEMPPLTTGWHAHRRHQLLYAARGALHLEVDRAQWLLPPQRAAWLRG 66

Query: 73  GVEHSNQVTANAELCFLFIEPSAVT--MPTTCCTLKISPLCRELILTLANRTTTQRAEP- 129
           G  H  +      LC +++EPS V       C    + PL RE+++        +  +  
Sbjct: 67  GTLHRARANHLVTLCTVYLEPSLVPTAPQEECSVFLLPPLAREMLIYSVRWGPERAPDDT 126

Query: 130 MTRRLIQVLFDELPQQPQ--QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187
           +     Q L   L +     Q   LP +  P++   +           +  + A    +S
Sbjct: 127 VAESFFQTLAHLLAEWSSQGQTWRLPRARTPELEKAMAYTLAHLAGPLSFEEAARAAGLS 186

Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKK 246
            R LAR   +E   ++R++    +++ A++ L + G  V + A+ +G++S  AF   F  
Sbjct: 187 GRTLARRFDEEAQTTWRRFLHDARMLRAMELLAQDGARVTQTAYDVGFESLAAFTHAFHA 246

Query: 247 GLGQTPGRYIARLT 260
             G+ P  +  R+ 
Sbjct: 247 FSGERPRDFRQRVA 260


>UniRef50_C2FVA1 AraC family transcriptional regulator n=1 Tax=Sphingobacterium
           spiritivorum ATCC 33300 RepID=C2FVA1_9SPHI
          Length = 263

 Score =  182 bits (462), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 8/238 (3%)

Query: 31  LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV-TANAELCFL 89
           L +  H H+  QLI   +G +    E     +P +Y  WIP G+ +     +   +L  L
Sbjct: 23  LNTTFHHHQLNQLISPANGVLYLHTEGDTLYIPDKYYAWIPSGMIYKLISKSEQIKLTTL 82

Query: 90  FIEPS----AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
           F++P           T      + L  EL+          +   +    +  L   LP  
Sbjct: 83  FLKPEKNEIQSDFFNTLGVYAPNTLIEELLQFGFRHWQETKHAGLKESCMAALKRILPVV 142

Query: 146 PQQQLHL--PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203
               L L  P      +  ++  + K         Q A  F +SER L+R   KETG + 
Sbjct: 143 LSTPLKLFVPAPESEVLMEIITYIQKHLNSPSDFQQLAQRFNLSERTLSRWFKKETGSTI 202

Query: 204 RQWRQQLQLIMALQGLVKGDT-VQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260
            Q+ + +++  AL+ +   +  + ++ H +GY+S +AF T+FK+ +G++P  Y  R  
Sbjct: 203 FQFVKSVRVQKALELIESSNMEIVEITHAVGYNSLSAFSTVFKEFMGESPQEYKKRFH 260


>UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753
           RepID=A7VRD3_9CLOT
          Length = 277

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 97/240 (40%), Gaps = 23/240 (9%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFI---E 92
           H H   +++    GA    +E   + + P   V +  G  H  +  A A L  +F+   +
Sbjct: 38  HSHDFCEILYVAGGAGEAILEGKKFRLAPGDLVVVNPGTLHEERSDAKAPLRLIFLAIRD 97

Query: 93  PSAVTMPTTC------CTLK-------ISPLCRELILTLANRTTTQR--AEPMTRRLIQV 137
            +   +P  C        L        +    REL+   +++    +  ++ +   L+ +
Sbjct: 98  FAVPGLPAGCLSQEKYRVLSCGEYRYKMDIYLRELLQETSSQIEFYQEISQGLVSALLVL 157

Query: 138 LFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197
           +   +   P+ +  L        + + E + +       L   +    +S+  L+ L  +
Sbjct: 158 VMRLIRINPEDEAALSQEC----QKIKEYLDQNFTSPITLDSLSETVYISKHYLSHLFKE 213

Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
           +TG+S  ++    ++  A + L + +  V +V+  +GY++   F  +FK+  G +P +Y 
Sbjct: 214 QTGVSPIKYLTSKRMEKACELLSETELPVSEVSKAVGYENPLYFSQVFKRIYGISPVKYR 273


>UniRef50_B5CUH6 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM
           17135 RepID=B5CUH6_9BACE
          Length = 268

 Score =  181 bits (460), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 49/243 (20%), Positives = 98/243 (40%), Gaps = 12/243 (4%)

Query: 26  AGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV-TANA 84
            G +E+  P H H K Q+I  L G +   + +  + VP ++  WIPG  EH         
Sbjct: 25  TGWEEIKLPGHAHEKCQIIYTLSGTLHVQIGSTSYFVPEKHIAWIPGSTEHELSSKNRQV 84

Query: 85  ELCFLFIEPSAVTMPT---TCCTLKISPLCRELILTLA------NRTTTQRAEPMTRRLI 135
            L   ++   A    T          +    E +  +A       +  +           
Sbjct: 85  SLVIFYLSMDADDKDTALKEFSIYHTNSFIAENLKFIASKGTEIEQADSPDLYTFALSFF 144

Query: 136 QVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
           ++L             L + +  ++  ++  + +   E   + Q A  F  S RNL+RL 
Sbjct: 145 KLLPSISQDMGFLLKMLAIPNDARLHPILAYLQEHLHENLKMPQLAAHFGFSVRNLSRLF 204

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGR 254
             E+G+ F  +   L+++ A++     G T+Q++A+ +G+ +   F  +F++  G +P  
Sbjct: 205 -NESGIRFSYYVNNLRIMRAIELFADGGRTMQQIAYEVGFATPNHFNRVFRQITGVSPNA 263

Query: 255 YIA 257
           ++ 
Sbjct: 264 FVK 266


>UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC
           29149 RepID=A7B0D2_RUMGN
          Length = 270

 Score =  181 bits (459), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 88/252 (34%), Gaps = 20/252 (7%)

Query: 20  VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79
           +A+    G ++  +  H H   +L   L G     +E  ++ +     V  P  + H + 
Sbjct: 15  IAYAYAEGVNDNMTQSHFHDFFELYYLLEGERMHMIEGEIYHLTANDFVLFPPHIMHHSY 74

Query: 80  VTANAEL--CFLFIEPSAVTMPTTCCTLKISPLC-----------RELILTLANR---TT 123
              +       L+  P  +   T C  L    L              L+L+L +      
Sbjct: 75  GEKDMPFKRIVLYFSPDLIANDTICQLLSEKELLFVNEGYIPNQILSLLLSLTHEIDVPG 134

Query: 124 TQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGF 183
                 +  +L  +L + L    +    +P +        V+ +    +E  ++ Q A  
Sbjct: 135 KYHDAYICNQLNGLLLNMLRLDFEAVKSIPKTRSA---KAVDYIHNHYMEDISVNQLAEI 191

Query: 184 FAMSERNLARLIVKETGLSFRQWRQQLQLIMALQG-LVKGDTVQKVAHTLGYDSTTAFIT 242
             +S  +L       TG +  Q+    +++ A +  L     + +++  +G+ + T F  
Sbjct: 192 LYVSPYHLCHEFKNATGKTIIQYLNTTRILHAQRLMLETDYNITQISREVGFSNLTHFNR 251

Query: 243 MFKKGLGQTPGR 254
            FKK  G  P  
Sbjct: 252 TFKKITGVAPRE 263


>UniRef50_B0MGZ5 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM
           14662 RepID=B0MGZ5_9FIRM
          Length = 274

 Score =  180 bits (458), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 82/240 (34%), Gaps = 15/240 (6%)

Query: 33  SPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIE 92
            P H H    +     G    T     +++ P   ++      H+ +   +  L   FI 
Sbjct: 27  FPNHFHDHYVIGCIESGMRKVTCRGEEFLIEPGDLLFFNYRENHACEQVGDYPLNCRFIN 86

Query: 93  PSAVTMPTTCCTLK--------ISPLCR-----ELILTLANRTTTQRAEPMTRRLIQVLF 139
                M      +         + P+ R     EL+  +         E     L  +L 
Sbjct: 87  IKRERMKEIAEEITGRNEYPEFVKPMIRKCSKAELLREVYRMVAEGSQEFEKEELFYLLM 146

Query: 140 DELPQQPQ--QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK 197
           ++L  +    +Q  + V    ++  +   M +   E  +L Q      +S  +L R   K
Sbjct: 147 EQLLSEYAVFEQKKVQVPDTERLNAVCSYMKEHYSENVSLEQLCKIAGVSRYSLIRYFTK 206

Query: 198 ETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIA 257
              ++  Q+ + +++  A   L +G    + A   G+   + F   FK+  G TP +Y  
Sbjct: 207 YKKITPYQYLESIRVNRAKLYLEQGTEPAEAAAMTGFSDQSHFTNFFKRLFGLTPAQYQR 266


>UniRef50_D1BFL9 DNA-binding domain-containing protein, AraC-type n=1
           Tax=Sanguibacter keddieii DSM 10542 RepID=D1BFL9_SANKS
          Length = 280

 Score =  180 bits (457), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 54/251 (21%), Positives = 112/251 (44%), Gaps = 8/251 (3%)

Query: 21  AFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV 80
                 G     +  H H    L     G +   +++A+W + P   +W+P G  H+++ 
Sbjct: 29  VVVADQGVSRPLAAPHSHPDAMLAWCYRGTVWVYLQDAVWRLAPGQGIWVPAGTPHTSRH 88

Query: 81  TANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLF 139
              +  C+ ++  +A+  P  T   + ++   +E++L L         + +  R+  V+ 
Sbjct: 89  EPGSTGCYTYLPDAALVAPVATITRVLVARAVQEMLLHLGA---DDMDDGLRVRIQAVIL 145

Query: 140 DELPQ----QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLI 195
           + L Q           +P+ +  ++R +V+ +   P +     +      + ER + R++
Sbjct: 146 EMLQQPSLQASDGWGEVPLPADERLRPLVQAVLADPGDPRTARELFDAHGLHERTVLRVL 205

Query: 196 VKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
            ++ G++F +WR  +++  A + LV G  V  VAH  GY +T+AF   FK+  G TP  +
Sbjct: 206 QRDVGMTFARWRAGVRMTQAARMLVDGTPVGLVAHRTGYGTTSAFSAAFKQRFGMTPREH 265

Query: 256 IARLTTVSPQS 266
           +AR+       
Sbjct: 266 VARVRANPAHH 276


>UniRef50_UPI000197B237 hypothetical protein BACCOPRO_02201 n=1 Tax=Bacteroides coprophilus
           DSM 18228 RepID=UPI000197B237
          Length = 274

 Score =  180 bits (457), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 53/252 (21%), Positives = 111/252 (44%), Gaps = 12/252 (4%)

Query: 20  VAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQ 79
           V      G  E+  P H H K Q+I  L G +   + +  + VP ++  WIP G EH   
Sbjct: 19  VILIKKTGWKEVNLPGHVHGKCQIIYTLAGTLHVEIGSESYFVPEKHIAWIPQGAEHKLS 78

Query: 80  V-TANAELCFLF--IEPSAVTMPT-TCCTLKISPLCRELILTLANRT--TTQRAEPMTRR 133
             +    +   +  + P     P         + L  E +  +A++     ++ +P    
Sbjct: 79  SNSRQVSMVIFYVSLRPEGKDDPKGEFAIYTANRLIGENLKFIASKGKMIEKQEQPDLYH 138

Query: 134 LIQVLFDELPQQPQQQL----HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSER 189
                F+ LPQ    +      L +    ++  ++  +     E   + + A  + +S R
Sbjct: 139 FALGFFNLLPQMSPGKELLLKSLVIPDDSRLYPILRYLTDHVQEELRMDEVALRYNLSTR 198

Query: 190 NLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGL 248
           NL+RL  +E+ + F  +  +L+++ A++ +   G T+Q++A+ +G++++  F  +F++  
Sbjct: 199 NLSRLF-QESNIHFSSYVNRLRIMRAIELMTDGGRTMQEIAYAVGFNNSNHFNRVFRQVT 257

Query: 249 GQTPGRYIARLT 260
           GQ+P  Y+    
Sbjct: 258 GQSPKNYLRSCQ 269


>UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6CTF5_PAESJ
          Length = 294

 Score =  180 bits (457), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 51/277 (18%), Positives = 93/277 (33%), Gaps = 31/277 (11%)

Query: 18  AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77
               + I   +D     +H H + +L+L   G     V+   + +    A+++  G  HS
Sbjct: 18  PVSLYEITCPSDAPLLDLHWHDELELLLVTEGTAVFRVDLQDYELQAGEAIFVNSGELHS 77

Query: 78  NQVTAN-------AELCF-------------LFIEPSAVTMPTTCCTLKISP-----LCR 112
             V                             +I P           L+  P     L  
Sbjct: 78  GYVVGGKPCSFDAVVFHSSLFSSGSIDYLFDRYISPVLEKRYEVPAHLRREPGPGMELLA 137

Query: 113 EL--ILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSH---PKIRTMVEMM 167
            L  I  +           +   L  +L   +          P        +++T++E +
Sbjct: 138 MLDQIFEVHRNEQAASELTIKGLLFSILAKLVSLGKPSVRVKPEQEGYRIERLKTVIEYI 197

Query: 168 AKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDT-VQ 226
            +   E   L + A    MSE    R   + T  S  ++    ++  A   L + D  + 
Sbjct: 198 EQNYAEPIPLQKLAELARMSESYFCRFFKRITTKSPIEYMNSYRVQQAASRLRQTDAKIM 257

Query: 227 KVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVS 263
           +VA  +G++S + F T+F++  G TP  Y +RL   S
Sbjct: 258 EVALDVGFNSLSYFNTVFRQRFGCTPREYRSRLQVNS 294


>UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=Roseburia
           intestinalis L1-82 RepID=C7G755_9FIRM
          Length = 302

 Score =  180 bits (457), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 98/280 (35%), Gaps = 29/280 (10%)

Query: 5   LNLNGYEPDRH-HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63
             L   +P          + I         PVH H + ++I    G +T ++    ++  
Sbjct: 16  FELKENKPHGTKDNPFSIYHIENAGRSFQIPVHWHDEFEIIYVKSGLLTVSISGESYIGK 75

Query: 64  PQYAVWIPGGVEH-SNQVTANAELCFLFIEPSAVTM------------PTTCCTLKISP- 109
              A  +  G  H     T   +          ++             P     L I+P 
Sbjct: 76  AGDAFVVSPGNLHLMGSQTGTVDYFTFLFPLKYISFRTDDMLDDKLLEPLNSGHLMINPR 135

Query: 110 -------LCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRT 162
                  LC +LI           ++   +   +++  +   +  ++  +   +    R 
Sbjct: 136 VKDSAKELCEQLIDIYMAENDETESKITAQIKTKIILLQFILEMWKKGFVIE-NDTSGRN 194

Query: 163 MVE-----MMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQ 217
           +VE      + +      +L ++   F +SE+ ++R   +   ++  Q+   L+L  A Q
Sbjct: 195 IVEKEMVSYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYITYLRLENAKQ 254

Query: 218 GLVKGD-TVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
            L   D +V + A   GY + + FI  FKK  G +P +Y 
Sbjct: 255 LLQDTDLSVTETAMQSGYQNVSYFIRSFKKAYGISPLKYR 294


>UniRef50_D1VIF5 Transcriptional regulator, AraC family n=1 Tax=Frankia sp. EuI1c
           RepID=D1VIF5_9ACTO
          Length = 250

 Score =  179 bits (456), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 4/244 (1%)

Query: 13  DRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPG 72
           DR   A   + +         P+      QL+    GA+T +     W +PP  A+WIP 
Sbjct: 7   DRAEPAVRGYAVTHPPGVAALPIQA-GWDQLLYTASGAMTISTPAGSWFIPPHRALWIPD 65

Query: 73  GVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKIS-PLCRELILTLANRTTTQRAEPMT 131
           G + + +  + A +  L+        P     + +     REL+L    R      +P+ 
Sbjct: 66  GAQATVRNRSPAAVRNLYFATPLGVAPPRAQAVAVPERFGRELLLHAVRRCPLDLGDPVH 125

Query: 132 RRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191
             L+ VL D+L   P+  + LP  S P+   +   +   P         A     S R L
Sbjct: 126 AALLTVLVDQLRGLPEASVWLPWPSDPRASDLATALVADPAAGLT--SLAHRVGASRRTL 183

Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQT 251
            R    ETGLS   WR++ +++ +L  L  G +V + A   GY + +A++  FK+ LGQT
Sbjct: 184 ERAFGAETGLSLGAWRRRARILSSLDTLAAGASVTQAAIEAGYATPSAYVAAFKQELGQT 243

Query: 252 PGRY 255
           P  +
Sbjct: 244 PRHF 247


>UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus RepID=C6JCU7_9FIRM
          Length = 282

 Score =  179 bits (456), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 96/286 (33%), Gaps = 33/286 (11%)

Query: 2   MHRLNLNGYEPDR-HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           MH L+ N   P   +        I           H H + ++I  L G++T T++   +
Sbjct: 1   MHDLDHNEDRPRGTYEFPFEFHHIDHTHPRYVMSYHWHVEYEIIRILEGSLTVTLDEKSF 60

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN 120
                  +++  G+ HS  +  +     +  + +        C   I  +  +       
Sbjct: 61  TAVKNDVIFVHSGILHSG-IPHDCVYQCIVFDMNTFLKNNPVCGEYIQKILHQ---ETML 116

Query: 121 RTTTQRAEPMTRRLIQVLFDEL-------------------PQQPQQQLHLPVSSHPK-- 159
                   P     I VLFD +                            +   +  +  
Sbjct: 117 FPHFSDEHPQILNCISVLFDAMYEKDTGYELTVFGQFYHFFGLIFSNHYFIENPTRTRRD 176

Query: 160 ------IRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
                 ++ ++E + K       L + +   +MS +   R   + T  +   +  + ++ 
Sbjct: 177 YKRILQLKQVLEFIEKNYANPITLQELSASVSMSPKYFCRFFSEMTHQTPVDYLNRQRIE 236

Query: 214 MALQGLVKG-DTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAR 258
            A   L    D++ ++A+  G++  + FI  FKK  G TPG+Y  R
Sbjct: 237 EACLQLAATDDSITEIAYRNGFNDLSYFIRTFKKYKGMTPGKYKRR 282


>UniRef50_C5PU57 AraC family transcriptional regulator n=1 Tax=Sphingobacterium
           spiritivorum ATCC 33861 RepID=C5PU57_9SPHI
          Length = 271

 Score =  179 bits (456), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 8/238 (3%)

Query: 31  LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV-TANAELCFL 89
           L +  H H+  QLI   +G +    E     +P +Y  WIP G  +     +   +L  L
Sbjct: 28  LNTSFHHHQLDQLISPENGVLYLHTEGDTLYIPDKYYAWIPSGTIYKLISKSEQIKLRTL 87

Query: 90  FIEPS----AVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ 145
           F+EP           +      + L  EL+    +    +R   +    I  +   LP  
Sbjct: 88  FLEPEKNEFHADFFNSLAVYAPNTLIEELLQFGFSHWKKERDPELKEYCIAAIRHILPVA 147

Query: 146 PQQQLHL--PVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSF 203
               L L  P  +   ++  +  +         +   A  F +SER L+R   KETG + 
Sbjct: 148 LSTPLKLFVPAPASEVLQESITYIQNHIKGPLDIQHLAQKFHLSERTLSRWFKKETGSTL 207

Query: 204 RQWRQQLQLIMALQGLVKGDT-VQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLT 260
            Q+ + +++  AL+ +      + ++ H +GY+S +AF T+FK+ +G++P  Y  R  
Sbjct: 208 FQFVKSVRVQKALELIENSRMDIIEIMHAVGYNSLSAFSTVFKELIGESPQEYKKRFQ 265


>UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium RepID=C4ZAF9_EUBR3
          Length = 292

 Score =  179 bits (455), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 51/284 (17%), Positives = 97/284 (34%), Gaps = 32/284 (11%)

Query: 5   LNLNGYEPDRHH-EAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVP 63
             L    P          + I         PVH H + ++I    G +  T+    ++  
Sbjct: 3   FELKENRPHGTPENPFSQYHISDVKRAFQIPVHWHDELEIIYVKQGKLHVTISGENYIGS 62

Query: 64  PQYAVWIPGGVEH-SNQVTANAELCFLFIEPSAVTM------------PTTCCTLKISPL 110
           P+ A  +  G  H     T +A+          ++             P     L ISP 
Sbjct: 63  PKDAFVVSPGSLHLMGSPTGDADYYTFLFPLEYISFQTDDLMEKSILSPLKRGRLMISPQ 122

Query: 111 CRELILTLANRTTT------------QRAEPMTRRLIQ--VLFDELPQQPQQQLHL---P 153
             +    +  R                 A  +  +      L   + +  +  L L    
Sbjct: 123 INDTAADICERLIEINEQISGKNAEKTDAANIEAQFETKITLIKFIRKMWRNGLILENGT 182

Query: 154 VSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLI 213
             ++   + M+  + +      +L ++   F +SE+ ++R   +   ++  Q+   L+L 
Sbjct: 183 NGTNTTEKEMITYIRQNYTREISLKEFGAQFHLSEKYISRYFKEHFHITLSQYVNHLRLE 242

Query: 214 MALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYI 256
            A Q L +   +V +VA   GY + + FI  FKK  G +P +Y 
Sbjct: 243 HARQLLEESTASVTEVAMCSGYQNVSYFIRSFKKMYGVSPLKYR 286


>UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=Clostridiales
           RepID=C5RE92_CLOCL
          Length = 286

 Score =  179 bits (455), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 90/286 (31%), Gaps = 27/286 (9%)

Query: 2   MHRLNLNGYEPDR-HHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW 60
           M  L+                + +         P H H + ++I  + G    T+     
Sbjct: 1   MKYLDYKENRQHGTFDFPIAFYHVSPSHPRYNMPYHWHTEYEIIRIISGEFLLTLNGNEL 60

Query: 61  MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRE------- 113
            +      +I  G+ H      +     +  +  ++    + C+ +I  +          
Sbjct: 61  KLKTGDLAFIHAGILHGGTPI-DCVYECIVFDMKSLLKVNSTCSKQIQDIIHNSKVINSL 119

Query: 114 --------------LILTLANRTTTQRA--EPMTRRLIQVLF-DELPQQPQQQLHLPVSS 156
                         L  ++A +        +     L+ ++    L   P++        
Sbjct: 120 LPTDNLELQTVCNYLFESMAQKKLGYELVTQGSLYHLLGIILEHRLYSTPKEATSKNQQR 179

Query: 157 HPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMAL 216
             + + ++ ++ +   +   L   +    M+ +   R     T  S   +    ++  + 
Sbjct: 180 INQFKNVLSLIEQQYPDPLTLEDLSKAAGMTPKYFCRFFRGMTQRSPIDYLNYYRIESSC 239

Query: 217 QGL-VKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTT 261
           + L    +++ ++A   G++  + FI  FKK  G TP +Y+     
Sbjct: 240 EQLVSTNESITEIALNCGFNDISYFIKTFKKYKGVTPKQYLKDYHA 285


>UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp.
           JDR-2 RepID=C6D3L6_PAESJ
          Length = 305

 Score =  179 bits (455), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 54/282 (19%), Positives = 107/282 (37%), Gaps = 42/282 (14%)

Query: 30  ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV--TANAELC 87
               P+H+H   +L+    G+     E   + +       I  G++H+  V  +   E+ 
Sbjct: 28  GTMIPLHRHEFVELVFIKQGSGLHEYEGNTFPITAGDVFIIEPGMDHAYTVEQSEGMEVV 87

Query: 88  FL------------------------FIEPSAVTMPTTCCTLKISP--------LCRELI 115
            +                        ++EP   +  +    L +SP        +  +L+
Sbjct: 88  NVLFVPALLERELAVLSGVTSFIDFYYMEPFLRSDVSFQAKLTLSPRQMMDIRGILEQLM 147

Query: 116 LTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLH-LPVSSH--PKIRTMVEMMAKGPV 172
               N+ +  +   +  +LI++           + H LP   +    I  + E + +   
Sbjct: 148 KEYGNKESGYQ-FLIKSKLIELFIILSRIYANNRNHSLPSIQNDGEMIARICEFIKRHQA 206

Query: 173 EWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGL-VKGDTVQKVAHT 231
              +L Q +    MS+     L  + TG+SF ++R   ++ +A Q L    D + ++A  
Sbjct: 207 HPLSLEQISQMAGMSQSKFTLLFRQMTGMSFVEFRNDQRIQLAKQLLAASSDKIARIALD 266

Query: 232 LGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ 273
            GY+  + F  +FKK  G+TP  Y  R+   S      +PR+
Sbjct: 267 TGYEDLSHFNHVFKKLTGETPSLYRKRMKGRSE---SGEPRE 305


>UniRef50_A9GKK5 Transcriptional regulator, AraC family n=1 Tax=Sorangium cellulosum
           'So ce 56' RepID=A9GKK5_SORC5
          Length = 304

 Score =  179 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 102/256 (39%), Gaps = 7/256 (2%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
           H  A AF             H H + QL+  L G     VE+A +++PPQ A  IP G  
Sbjct: 48  HAGARAFSYEDELRGAVYGWHTHARHQLLCPLAGTARLEVEDASFLLPPQLAALIPAGER 107

Query: 76  HSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEPMTR-R 133
           H+     +A +  ++ EP+A   P       +I  L RE+++        +R +      
Sbjct: 108 HATTC-GDASIVSIYFEPAAFPSPLAAVRIFEIPALLREMVIYARRWPVARRPDDAAANT 166

Query: 134 LIQVLFDELPQQPQ--QQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNL 191
               + D +           LP      ++  +E   +       L + A F   +ER L
Sbjct: 167 FFAAMADIIGPLLDRGATYRLPRGKTRPVQRAIECALRDVASA-DLPRAAAFAGATERTL 225

Query: 192 ARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKKGLGQ 250
            R   +ETG+++R +  + +++ A+  L     +V +VA  +G+ S  AF   F+   GQ
Sbjct: 226 RRRFREETGVTWRGFVTRARVLRAIDLLSGPSASVTQVALDVGFQSLGAFAAAFRAVTGQ 285

Query: 251 TPGRYIARLTTVSPQS 266
           TP  +           
Sbjct: 286 TPSEFRRTARPSPGGG 301


>UniRef50_D0LZ72 Transcriptional regulator, AraC family n=1 Tax=Haliangium ochraceum
           DSM 14365 RepID=D0LZ72_HALO1
          Length = 284

 Score =  178 bits (453), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 61/263 (23%), Positives = 108/263 (41%), Gaps = 22/263 (8%)

Query: 18  AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77
               F +        +P H+HR+ Q++ AL G++   V  A W++PPQ A +IP G EH 
Sbjct: 22  PPACFGLADEMGPRHTPWHRHRRHQILYALTGSLKLEVTEAQWLLPPQRAAFIPAGCEHR 81

Query: 78  NQVTANAELCFLFIEPSAVTMP-------------TTCCTLKISPLCRELILTLANRTTT 124
            +   +A L  ++++ +                     C   ++ L RE++L        
Sbjct: 82  VRCQRSAALRTVYLDTATFAAGEDAAAPAPVPVIAAGTCVFSVTSLAREMLLYAMRWGPL 141

Query: 125 QRAEPMTRRLIQ-------VLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGAL 177
           + A+     ++         L      +    L LP    P +    E            
Sbjct: 142 RSADDRASEILADAFFSALALLSREWIRADAGLRLPRPRSPDLSRACEHALADLAAASMA 201

Query: 178 GQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDS 236
                  A+S R LAR    ET +S+R + +  +++ A++ L + G  V +VA ++G+D+
Sbjct: 202 RAA-HAAAVSPRTLARRFRDETQMSWRSFLRTARVLRAMELLAEPGARVTEVALSVGFDN 260

Query: 237 TTAFITMFKKGLGQTPGRYIARL 259
             AF T F+   G++P  Y  R 
Sbjct: 261 PGAFSTSFRALTGESPSSYQRRF 283


>UniRef50_Q2S7S2 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella
           chejuensis KCTC 2396 RepID=Q2S7S2_HAHCH
          Length = 250

 Score =  178 bits (452), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 95/231 (41%), Gaps = 1/231 (0%)

Query: 30  ELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFL 89
           + +  +H   +GQL     GAI C  +   W+  P+   WIP G +H  +  +      L
Sbjct: 17  DQSRDLHARSEGQLYWLEQGAIFCRSDRFHWLTAPRQLTWIPPGCQHDARPLSTVRGVLL 76

Query: 90  FIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQ 148
            +       +P     L+   L    +L L               L+QV   E  +    
Sbjct: 77  HLREDLTFVLPKEPVALEPHRLLEATLLRLIELCPESDWLERHEHLLQVFLWEAREATPL 136

Query: 149 QLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQ 208
           +  LP+   P++  M   + + P     L   A  +  S R L R  ++ETG S  QW Q
Sbjct: 137 RQRLPMPHDPRLLRMANSLWRAPESNPGLDALALEYGFSRRTLTRKFMQETGASLSQWTQ 196

Query: 209 QLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
             +L+ AL+ L   ++V   A  +GY S + F  +FK+  G +PG Y  R 
Sbjct: 197 HAKLLRALELLAANESVSSAAFGVGYQSVSTFCAVFKQVFGMSPGDYKRRF 247


>UniRef50_C5PVX4 AraC family transcriptional regulator n=2 Tax=Sphingobacterium
           spiritivorum RepID=C5PVX4_9SPHI
          Length = 258

 Score =  177 bits (450), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 5/219 (2%)

Query: 31  LTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVT-ANAELCFL 89
               VH HR  Q +    G         + ++P  +A WIP  + H      ++ +L  +
Sbjct: 27  HAHAVHGHRLAQFVYVEKGFQYLEAGGKIHLLPQNHAAWIPPNMLHKTSTDASHVQLRTI 86

Query: 90  FIEPSAVT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQ--P 146
           F     +          +++P+ +E+IL                  ++ +  ELP     
Sbjct: 87  FYRMEDIPEFYNELRIFQVAPVLKEMILYAEKWNRIADYSIEEDTFLKAIVLELPNFWKH 146

Query: 147 QQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQW 206
              LH+P      +  +   +     +   + + A    +S R+L R+   ETG++  ++
Sbjct: 147 SLSLHIPAPMDEHLIKVCAYIHSHLADNRPVAEIAEQHYLSLRSLQRIFKSETGITLAKY 206

Query: 207 RQQLQLIMALQGLVKGD-TVQKVAHTLGYDSTTAFITMF 244
            Q +++I +++ L  G  TV +VAH +GY S  AF   F
Sbjct: 207 MQMVRIIKSVELLGTGRYTVSQVAHLVGYKSVQAFSDSF 245


>UniRef50_Q84HW2 Transcription regulator n=1 Tax=Rhizobium sp. TAL1145
           RepID=Q84HW2_9RHIZ
          Length = 200

 Score =  177 bits (450), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 62/198 (31%), Positives = 106/198 (53%), Gaps = 2/198 (1%)

Query: 62  VPPQYAVWIPGGVEHSNQVTANAELCFLFIEPS--AVTMPTTCCTLKISPLCRELILTLA 119
           VPP  A+WI    +H   V   AE+  L+++P+       ++C  ++++PL RELI + A
Sbjct: 3   VPPTRALWIRANTDHKLSVARAAEIRVLYVDPAIGCAPTSSSCVVVEVTPLVRELISSCA 62

Query: 120 NRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQ 179
                 +      RL +VL D++    +  + LP+ + P+   +V+M+ + P     L  
Sbjct: 63  GLPWDYQPGSKEARLCEVLLDQIATLDRSPVDLPIPTDPRGLRIVDMLKREPSSREPLAA 122

Query: 180 WAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTA 239
            A     S R + R+ V+ET L+F  WRQ+L+L+ AL+ L  G+ V  VA  +GY+S ++
Sbjct: 123 LAARVGASSRTIERIFVRETHLAFGAWRQRLRLLAALELLAYGEAVTNVALDVGYESASS 182

Query: 240 FITMFKKGLGQTPGRYIA 257
           F+  F++  G TP R+  
Sbjct: 183 FVAAFRETFGTTPARFFK 200


>UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=Desulfatibacillum
           alkenivorans AK-01 RepID=B8FM47_DESAA
          Length = 277

 Score =  177 bits (450), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 87/255 (34%), Gaps = 18/255 (7%)

Query: 23  CIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQV-T 81
            +H          H H    + + L G      + A  ++ P+    I  G  H+ +   
Sbjct: 22  AVHGLHVTNEFSRHVHDGFSIGIVLEGKRVIDQKGASVVIGPKDVFLINPGEPHACKSED 81

Query: 82  ANAELCFLFIEPSAVTMPTT----------------CCTLKISPLCRELILTLANRTTTQ 125
                  + +EP A+    +                    +++ L RE +  +    +T 
Sbjct: 82  GKHTYFTICVEPEALKSFASQISEKAQETPYFSCLAAKDEELNSLIREFMTLVQKSGSTM 141

Query: 126 RAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185
             E     ++          P +   +       +    E +     E   L + AG   
Sbjct: 142 EKEASLISILSTAILRYGDNPPEIRRI-SPHVQAVNRAREYIKTHYAENLTLKELAGVAC 200

Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFK 245
           +S     RL ++  G+S   +  Q ++  A + L +G ++   A  +G+   + F   FK
Sbjct: 201 LSPFYFQRLFLENVGISPHDFLIQYRIKKAREMLDQGSSLADAALDVGFTDQSHFTRAFK 260

Query: 246 KGLGQTPGRYIARLT 260
           +  G +PGRYI  L 
Sbjct: 261 RVTGISPGRYIRNLQ 275


>UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens
           DSM 14469 RepID=C6LA91_9FIRM
          Length = 288

 Score =  177 bits (450), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 87/274 (31%), Gaps = 34/274 (12%)

Query: 18  AAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHS 77
               +  H      +   H H + + I A HG +  TV    + + P    +I  G  H 
Sbjct: 17  PLQVYSHHDKDGFFSVSQHWHEELEWICAEHGVLNLTVRGRSFTLHPGEFCFINSGELHE 76

Query: 78  NQVTANAELCFLFIEPSAVTM---------------------PTTCCTLKISPLCRELIL 116
            +    +    +   P  +                       PT       SP   ++IL
Sbjct: 77  IKSGGPSLHHAIVFNPDILDFTLYDICQHSFIRPVTSGNLIFPTLPSVF--SPEESQMIL 134

Query: 117 -TLANRTTTQRAEPMTRRLIQ--VLFDELPQQPQQQLHLPVSSHPK-------IRTMVEM 166
             +          P    L     +   L    Q    L  +   K       ++ ++E 
Sbjct: 135 FHMQEIIRLYHTLPSCASLSIKIHILQILELFFQADCFLENTISSKEKDSQNKLKKVIEY 194

Query: 167 MAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGD-TV 225
           + +      +L   A    MS         +E G     +  + ++  A Q L   +  V
Sbjct: 195 IHENYAGPISLPDLAKICFMSPNYFCHYFKQEIGKPPIAFINEYRIQKACQILTDSELPV 254

Query: 226 QKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARL 259
            +VA ++G+D+ + FI  F++    TP  Y + L
Sbjct: 255 SQVAISVGFDNFSYFIRKFREYKNVTPTEYRSHL 288


>UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp.
           oral taxon 786 str. D14 RepID=C6IZN9_9BACL
          Length = 301

 Score =  177 bits (449), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 45/281 (16%), Positives = 90/281 (32%), Gaps = 35/281 (12%)

Query: 16  HEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVE 75
            +    +    G  E     H H + +    L G     V+   + V    AV+I GG  
Sbjct: 19  RQPFGTYWYRYGPGEHVIDCHWHDEAEFFYCLEGETLFQVDTDYFPVGAGEAVFIDGGDI 78

Query: 76  HSNQVTAN--AELCFLFIEPSAVT---------------------MPTTCCTLKISPL-C 111
           H+     +       L  +   +                       P        + L  
Sbjct: 79  HAAHAHGDQGCAFFSLVFDTQLLASAHYDAVQENLVLPLQERKATFPRHIRRETAADLSL 138

Query: 112 RELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSH---------PKIRT 162
            E I+ L  R+ +  +      +   LF  L +       +  S            +++T
Sbjct: 139 LEHIVALM-RSCSTESPGYEGAVKGHLFLMLAEIAATGRAVNRSHSSSRSESSKIDRLKT 197

Query: 163 MVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKG 222
           +++ +         L + A    MSE    R     T  +   +    ++  A + L + 
Sbjct: 198 VIQHIQHNYSHPIRLAELAALIPMSEGQFCRFFKSMTRQTPMDYINSYRIRQAAELLREP 257

Query: 223 DT-VQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTV 262
           +  +  +A  +G+D+ + FI +F+K +  +P  +  RL   
Sbjct: 258 ERKISDIALEVGFDNISYFIRVFRKAMNCSPSEFRKRLQAS 298


>UniRef50_C7PGY2 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga
           pinensis DSM 2588 RepID=C7PGY2_CHIPD
          Length = 278

 Score =  177 bits (449), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 100/251 (39%), Gaps = 8/251 (3%)

Query: 12  PDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIP 71
           P+   +A   F IH   ++   P+HQH K QL     G     + + L ++P ++  WIP
Sbjct: 22  PEIEQQATSIFVIHEKCEKQ-IPLHQHSKSQLFYVDGGIAYIRLADQLLVIPSRHYCWIP 80

Query: 72  GGVEHSNQV-TANAELCFLFIE---PSAVTMPTTCCTLKISPLCRELILTLANRTTTQRA 127
            G+ HS  +      L  +       +            I+ L  E++            
Sbjct: 81  AGIPHSLTIGQNGTHLRSILFTTKGENKHAFYNDVGIYPINDLLIEMMRYTEQWQGHILP 140

Query: 128 EPMTRRLIQVLFDELP--QQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFA 185
           +      +Q +   LP        + LP + + ++  ++  + +   +   L   +  F 
Sbjct: 141 DDERFMFLQSIKSILPKISIRHLPIALPYTENKRMLQIISYIEENISDKHTLETISKRFG 200

Query: 186 MSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMF 244
           +S+R L+R       +SF Q+ + L+++ A + + +   ++ ++A+  GY S  +F   F
Sbjct: 201 LSDRTLSRFFKDTLKISFLQYLKLLRMVKAFELIQQKAHSLSEIAYLTGYQSLASFSYTF 260

Query: 245 KKGLGQTPGRY 255
            +     P  +
Sbjct: 261 YQVTNMRPSEF 271


>UniRef50_A6GAR4 Putative transcriptional regulator n=1 Tax=Plesiocystis pacifica
           SIR-1 RepID=A6GAR4_9DELT
          Length = 262

 Score =  176 bits (448), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 65/251 (25%), Positives = 99/251 (39%), Gaps = 5/251 (1%)

Query: 11  EPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWI 70
             D     A+ F I        S  H HR+ QL+ A+ G +     +  W++P   A WI
Sbjct: 8   HVDVDRARALGFGIDETYRGFVSDWHSHRRHQLLHAVEGNLELEDSHGRWLLPEAQAAWI 67

Query: 71  PGGVEHSNQVTANAELCFLFIEPSAVTMP-TTCCTLKISPLCRELILTLANRTTTQRAEP 129
           P G  H       A L  L++ PS V  P       ++  L   L+         +R + 
Sbjct: 68  PAGQRHRVSSAG-ARLQTLYLAPSLVAQPPAETAVFQLPALGHALLARALGWPHHRRLDR 126

Query: 130 MTRRLIQVLFDELPQ--QPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMS 187
             R L   + +E            LP      +   +  +     +   L + A    +S
Sbjct: 127 RARALFVCVAEEFAAWSLEPGPWRLPQPRSQALAAAMRHVVDNLEDGPTLAEAARQAGVS 186

Query: 188 ERNLARLIVKETGLSFRQWRQQLQLIMALQGLVK-GDTVQKVAHTLGYDSTTAFITMFKK 246
            R+L R    ETG SFR++    ++I A + L + G  V  VA+ LGY S +AF T F  
Sbjct: 187 ARSLERRFRAETGSSFREFLLTARMIEAQRLLREPGARVSSVAYRLGYSSPSAFSTAFLA 246

Query: 247 GLGQTPGRYIA 257
            +GQ P   + 
Sbjct: 247 RVGQRPKALLR 257


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.313    0.170    0.521 

Lambda     K      H
   0.267   0.0518    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,015,370,294
Number of Sequences: 3077464
Number of extensions: 108350494
Number of successful extensions: 410784
Number of sequences better than 1.0e-01: 250
Number of HSP's better than  0.1 without gapping: 16706
Number of HSP's successfully gapped in prelim test: 2419
Number of HSP's that attempted gapping in prelim test: 350647
Number of HSP's gapped (non-prelim): 27852
length of query: 273
length of database: 1,040,396,356
effective HSP length: 127
effective length of query: 146
effective length of database: 649,558,428
effective search space: 94835530488
effective search space used: 94835530488
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 93 (40.1 bits)
