Phyre 2 alignment of P76241 with c2oziA_

Return to main results | Retrieve Phyre Job Id

Job Description | P76241
Confidence | 97.97% | Date | Thu Jan 5 12:21:05 GMT 2012
Rank | 64 | Aligned Residues | 78
% Identity | 19% | Template | c2oziA_
PDB info | PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:hypothetical protein rpa4178; | PDBTitle: structural genomics, the crystal structure of a putative2 protein rpa4178 from rhodopseudomonas palustris cga009
Resolution | 1.15 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . |  | . | . | . | 50 | . | . | . | . | . | . | . |  |  |  | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | H | H | E | A | A | V | A | F | C | I | H | A | G | T | D | E | L | T | S | P | V | H | Q | H | R | K | G | Q | L | I | L | A | . | L | H | G | A | I | T | C | T | V | E | N | . | . | . | A | L | W | M | V | P | P | Q | Y | A | V | W | I | P | G | G | V | E | H | S | N | Q | V | T | A | N | A | E | L | C | F | L | F
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | D | N | D | E | V | R | V | T | E | W | R | L | P | P | G | S | A | T | G | H | H | T | H | G | X | D | Y | V | V | V | P | X | A | D | G | E | X | T | I | V | A | P | D | G | T | R | S | L | A | Q | L | K | T | G | R | S | Y | A | R | K | A | G | V | Q | H | D | V | R | N | E | S | T | A | E | I | V | F | L | E
Template Known Secondary structure |  |  |  | S | S | S |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  | S |  |  |  |  | S |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90
|  | 91 | .
Predicted Secondary structure |  |  |
Query SS confidence |  |  |
Query Sequence |  | I | E
Query Conservation |  |  |
Alig confidence |  |  |
Template Conservation |  |  |
Template Sequence |  | I | E
Template Known Secondary structure |  |  |
Template Predicted Secondary structure |  |  |
Template SS confidence |  |  |
|  | 91 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions