14/01/2012 18:00:19 : INFO  : Run start: Sat Jan 14 18:00:19 GMT 2012
14/01/2012 18:00:22 : INFO  : Initialised job
14/01/2012 18:00:23 : INFO  : Renaming log file 'phyre2_20120114_180018.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/132bf09bb0e326cb/phyre_20120114_180018.log'
14/01/2012 18:00:24 : INFO  : Initialised job:
Sequence
>batch____
MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALW
MVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLAN
RTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQW
AGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAF
ITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ

14/01/2012 18:00:24 : INFO  : Checked sequence
14/01/2012 18:00:28 : INFO  : Finding homologues with PSI-BLAST
14/01/2012 18:00:30 : INFO  : PSI-BLAST 3 iterations
14/01/2012 18:02:22 : INFO  : PSI-BLAST 5 iterations
14/01/2012 18:05:33 : INFO  : Finished PSI-BLAST
14/01/2012 18:05:36 : INFO  : Running Buildali to generate a3m file
14/01/2012 20:29:04 : INFO  : Converting to HMM
14/01/2012 20:29:11 : INFO  : Calibrating HMM
14/01/2012 20:29:24 : INFO  : Searching HMM database
14/01/2012 20:35:35 : INFO  : Finished buildali
14/01/2012 20:35:36 : INFO  : Predicting secondary structure
14/01/2012 20:35:43 : INFO  : Predicted secondary structure (PSI-Pred)
14/01/2012 20:35:45 : INFO  : Predicting Disordered regions
14/01/2012 20:35:48 : INFO  : Predicted Disorder (Disopred)
14/01/2012 20:35:49 : INFO  : Running memsat_svm check
14/01/2012 20:38:37 : INFO  : Globular protein
14/01/2012 20:38:38 : INFO  : Predicted Transmembrane (memsat_svm) ID '132bf09bb0e326cb'
14/01/2012 20:38:40 : INFO  : Initialising fold library search
14/01/2012 20:38:43 : INFO  : Initialised search input
14/01/2012 20:38:45 : INFO  : Building Ensemble models
14/01/2012 20:38:49 : INFO  : Building hh.c3gbgA_.model.1.pdb
14/01/2012 20:39:03 : INFO  : Building hh.d2bnma2.model.2.pdb
14/01/2012 20:39:13 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/132bf09bb0e326cb/hh.d2bnma2.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/132bf09bb0e326cb/d2bnma2.75.pdb
14/01/2012 20:39:16 : INFO  : Building c3gbgA_.1.pdb
14/01/2012 20:39:28 : INFO  : Building c1d5yD_.2.pdb
14/01/2012 20:39:41 : INFO  : Building c3oioA_.3.pdb
14/01/2012 20:39:53 : INFO  : Building c1bl0A_.4.pdb
14/01/2012 20:40:06 : INFO  : Building c3oouA_.5.pdb
14/01/2012 20:40:19 : INFO  : Building c2k9sA_.6.pdb
14/01/2012 20:40:31 : INFO  : Building c3mn2B_.7.pdb
14/01/2012 20:40:45 : INFO  : Building c3mklB_.8.pdb
14/01/2012 20:40:58 : INFO  : Building c3lsgD_.9.pdb
14/01/2012 20:41:11 : INFO  : Building d1bl0a2.10.pdb
14/01/2012 20:41:23 : INFO  : Building d1d5ya2.11.pdb
14/01/2012 20:41:35 : INFO  : Building d1d5ya1.12.pdb
14/01/2012 20:41:47 : INFO  : Building d1bl0a1.13.pdb
14/01/2012 20:42:04 : INFO  : Building c1zgwA_.14.pdb
14/01/2012 20:42:18 : INFO  : Building c3ibmB_.15.pdb
14/01/2012 20:42:32 : INFO  : Building c3jzvA_.16.pdb
14/01/2012 20:42:43 : INFO  : Building d1o4ta_.17.pdb
14/01/2012 20:42:54 : INFO  : Building c3kgzA_.18.pdb
14/01/2012 20:43:06 : INFO  : Building c2pfwB_.19.pdb
14/01/2012 20:43:18 : INFO  : Building d1vj2a_.20.pdb
14/01/2012 20:43:55 : INFO  : Finished HH model building
14/01/2012 20:43:58 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
14/01/2012 20:44:43 : INFO  : html domain output complete ID '132bf09bb0e326cb'
14/01/2012 20:55:27 : INFO  : Run end  : Sat Jan 14 20:55:26 GMT 2012
