293 c3ks6A_ Probab=37.64   E-value=27  Score=14.97  Aligned_columns=136  Identities=15%

Q ss_pred             HHHHHHHHHCCCCCCEEEEECCHHHHCCCCHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEE
Q ss_conf             99999988606896379996598893694368899999998299921199996153004998999999998875398799
Q batch____       181 ADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFA  260 (362)
Q Consensus       181 ~~~l~~~~~~~~~~~~i~inls~~~l~~~~~~~~l~~~l~~~~~~~~~L~lei~e~~~~~~~~~~~~~l~~L~~~G~~i~  260 (362)
                      +..+..........+.+-+......+....+...+...+.+.+.....++.-.+.           ..+..++.......
T Consensus        88 l~~~~~~~~~~~~~~~~e~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-----------~~~~~~~~~~~~~~  156 (250)
T c3ks6A_          88 LEELCALYVDSHVNFRCEIKPGVDGLPYEGFVALVIAGLERHSXLERTTFSSFLL-----------ASXDELWKATTRPR  156 (250)
T ss_dssp             HHHHHHHHTTCSCEEEEEECCCTTSCCCTTHHHHHHHHHHHTTCGGGEEEEESCH-----------HHHHHHHHHCCSCE
T ss_pred             HHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCH-----------HHHHHHHHHCCCCC
T ss_conf             9999997206897499984277754316889999999998649977239996898-----------99999998589881


Q ss_pred             ECCCCCCC-------CCHHHHHHCCCCEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHC
Q ss_conf             90234886-------60678972689889881988612115855699999999999975990999714998999999971
Q batch____       261 LDDFGTGY-------ATYRYLQAFPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGK  333 (362)
Q Consensus       261 iddfG~~~-------~~~~~L~~l~~d~iKid~~~v~~~~~~~~~~~~~~~i~~~a~~lgi~via~GVe~~~~~~~l~~~  333 (362)
                      +--.....       ..........++++-++...+.            ..++.-+|..|+.|.+=.|++++++..+.++
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~g~~v~~wtv~~~~~~~~~~~~  224 (250)
T c3ks6A_         157 LWLVSPSVLQQLGPGAVIETAIAHSIHEIGVHIDTAD------------AGLXAQVQAAGLDFGCWAAHTPSQITKALDL  224 (250)
T ss_dssp             EEEECHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGCC------------HHHHHHHHHTTCEEEEECCCSHHHHHHHHHH
T ss_pred             EEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCC------------HHHHHHHHHCCCEEEEECCCCHHHHHHHHHC
T ss_conf             9998410002379689998897519949993021278------------9999999865988999727998999999976


Q ss_pred             CCCEEE
Q ss_conf             998992
Q batch____       334 GVHFLQ  339 (362)
Q Consensus       334 G~~~~Q  339 (362)
                      |||.+.
T Consensus       225 Gvd~I~  230 (250)
T c3ks6A_         225 GVKVFT  230 (250)
T ss_dssp             TCSEEE
T ss_pred             CCCEEE
T ss_conf             998999