Job Description P21514 Confidence 97.55% Date Thu Jan 5 11:38:25 GMT 2012 Rank 23 Aligned Residues 77 % Identity 19% Template c3qyyB_ PDB info PDB header:signaling protein/inhibitor Chain: B: PDB Molecule:response regulator; PDBTitle: a novel interaction mode between a microbial ggdef domain and the bis-2 (3, 5 )-cyclic di-gmp Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	C	D	F	R	V	F	L	Q	E	F	G	T	T	V	H	L	S	L	P	G	S	V	S	E	K	E	R	L	L	L	K	L	L	M	Q	G	M	S	V	T	E	I	S	Q	Y	R	N	R	S	A	K	T	I	S	H	Q	K	K	Q	L	F	E	K	L	G	I	Q	S	D	I	T	F	W	R	D	I	F	F
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.
Template Sequence		Q	D	W	I	G	R	W	G	G	D	E	F	L	I	G	V	H	A	S	E	D	E	A	T	L	K	L	N	Q	W	L	S	M	L	E	E	A	P	L	H	V	.	.	.	.	.	.	.	.	.	S	A	G	S	A	V	C	E	V	G	I	D	A	T	E	L	Y	R	R	A	D	A	A	M	Y	R	A	K	F	S
Template Known Secondary structure		T								T	T								S																								.	.	.	.	.	.	.	.	.									T	T																				T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.										.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		82	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	N	P	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	R	R	L	V
Template Known Secondary structure		T	S	S
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions