311 c3fluD_ Probab=93.93   E-value=0.45  Score=25.74  Aligned_columns=240  Identities=14%

Q ss_pred             EEECCCCCCCC------HHHHHHHHHH---CCCEEEECCC------EEEHHHHCCCHHHEEECCCCCEEEEEEECCCHHH
Q ss_conf             79837888842------7999999982---8985997685------6516674478233204758980899950798899
Q batch____        13 FSVAPMLDWTD------RHCRYFLRLL---SRNTLLYTEM------VTTGAIIHGKGDYLAYSEEEHPVALQLGGSDPAA   77 (330)
Q Consensus        13 i~lAPM~gvtd------~~fR~l~r~~---g~~~l~~tEm------v~~~~~~~~~~~~~~~~~~~~p~~vQl~g~dp~~   77 (330)
                      ++.|+.+=+++      ..++.+++.+   |.+++++...      .+.+....-.+......+...|+++++.+.+.++
T Consensus         7 v~~~~~TPf~~dg~iD~~~~~~~~~~l~~~Gv~gi~~~G~tGE~~~Ls~~Er~~i~~~~~~~~~~~~~vi~gv~~~~~~~   86 (293)
T c3fluD_           7 SLVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVE   86 (293)
T ss_dssp             EEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHH
T ss_pred             ECCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH
T ss_conf             00120078189888488999999999997799899987723570217999999999999996089973999658899999


Q ss_pred             HHHHHHHHHHCCCCEEEECCCCCCCHHCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHH
Q ss_conf             99999999966996999707898416525885115441889999999999985599779997227887751899999999
Q batch____        78 LAQCAKLAEARGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFIN  157 (330)
Q Consensus        78 ~~~aa~~~~~~G~d~IdlN~gCP~~~~~~~~~G~~L~~~~~~~~eIv~avr~~~~~pv~vKiRlg~d~~~~~~~~~~~~~  157 (330)
                      .++-++.+++.|+|+|=+-.-+-.+.            ..+-+.+-.+++.+++++|+.+=--.......   ...+.+.
T Consensus        87 ~i~~a~~a~~~Gad~v~~~pP~~~~~------------s~~~i~~~~~~ia~~~~~pi~~Yn~P~~tg~~---~s~~~~~  151 (293)
T c3fluD_          87 AIALSQAAEKAGADYTLSVVPYYNKP------------SQEGIYQHFKTIAEATSIPMIIYNVPGRTVVS---MTNDTIL  151 (293)
T ss_dssp             HHHHHHHHHHHTCSEEEEECCCSSCC------------CHHHHHHHHHHHHHTCCSCEEEEECHHHHSSC---CCHHHHH
T ss_pred             HHHHHHHHHHCCCCEEEECCCCCCCC------------CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC---CCHHHHH
T ss_conf             99999999854998999938878899------------98899999999997549989999675333677---5989999


Q ss_pred             HHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCEEEEEHHHH
Q ss_conf             99841497299965885234557765455666523799999998568983999888999999999984379757616875
Q batch____       158 TVSGKGECEMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQHMDGVMVGREAY  237 (330)
Q Consensus       158 ~i~~~~gv~~i~vh~r~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~ipvi~nG~I~s~~da~~~l~~~D~VmigR~~l  237 (330)
                      ++.+...+-.+-.+..                  ++..+.++.+..++--.+.+|.=...  +..+..+++|.+.|-+.+
T Consensus       152 ~L~~~~~v~giK~s~~------------------d~~~~~~l~~~~~~~~~v~~G~d~~~--~~~l~~G~~G~~~~~~n~  211 (293)
T c3fluD_         152 RLAEIPNIVGVKEASG------------------NIGSNIELINRAPEGFVVLSGDDHTA--LPFMLCGGHGVITVAANA  211 (293)
T ss_dssp             HHTTSTTEEEEEECSC------------------CHHHHHHHHHHSCTTCEEEECCGGGH--HHHHHTTCCEEEESGGGT
T ss_pred             HHHCCCCEEEEECCCC------------------CHHHHHHHHHHCCCCEEEEECCHHHH--HHHHHHCCCCHHHHHHHH
T ss_conf             9834798889963889------------------98999999986399879994877999--999983774128989988


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf             203899988764138999988989999999999998535781189999999998
Q batch____       238 QNPGILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGHITRHMLGL  291 (330)
Q Consensus       238 ~nP~if~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~  291 (330)
                      . |-++.++-+....+.   .+....+......+.+..........+|.-+...
T Consensus       212 ~-P~~~~~~~~a~~~gd---~~~a~~l~~~~~~~~~~~~~~~~~~~~K~~l~~~  261 (293)
T c3fluD_         212 A-PKLFADMCRAALQGD---IALARELNDRLIPIYDTMFCEPSPAAPKWAVSAL  261 (293)
T ss_dssp             C-HHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHTTTTSSSTTHHHHHHHHHT
T ss_pred             H-HHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
T ss_conf             6-999999999998699---8999999999999999997069908999999973