BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (702 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_A6VMR3 Ribosomal RNA large subunit methyltransferase L ... 867 0.0 UniRef50_A4SME4 Ribosomal RNA large subunit methyltransferase L ... 865 0.0 UniRef50_A1SX09 Ribosomal RNA large subunit methyltransferase L ... 755 0.0 UniRef50_A1S601 Ribosomal RNA large subunit methyltransferase L ... 727 0.0 UniRef50_Q0HJZ9 Ribosomal RNA large subunit methyltransferase L ... 699 0.0 UniRef50_P57444 Ribosomal RNA large subunit methyltransferase L ... 694 0.0 UniRef50_Q47Z09 Ribosomal RNA large subunit methyltransferase L ... 667 0.0 UniRef50_B4RZ48 Ribosomal RNA large subunit methyltransferase L ... 656 0.0 UniRef50_A6V328 Ribosomal RNA large subunit methyltransferase L ... 645 0.0 UniRef50_A4XWP8 Ribosomal RNA large subunit methyltransferase L ... 634 e-180 UniRef50_Q1N650 Putative uncharacterized protein n=2 Tax=Oceanos... 622 e-176 UniRef50_Q5QX63 Ribosomal RNA large subunit methyltransferase L ... 609 e-172 UniRef50_A6VW36 Ribosomal RNA large subunit methyltransferase L ... 608 e-172 UniRef50_Q60AX5 Ribosomal RNA large subunit methyltransferase L ... 602 e-170 UniRef50_C0N217 Putative RNA methylase family UPF0020 n=1 Tax=Me... 596 e-169 UniRef50_Q3KFC5 Ribosomal RNA large subunit methyltransferase L ... 596 e-169 UniRef50_Q3IGZ3 Ribosomal RNA large subunit methyltransferase L ... 594 e-168 UniRef50_Q5X0J6 Ribosomal RNA large subunit methyltransferase L ... 589 e-166 UniRef50_UPI0000E10BA2 23S rRNA m(2)G2445 methyltransferase n=1 ... 587 e-166 UniRef50_Q1QXV9 Ribosomal RNA large subunit methyltransferase L ... 586 e-166 UniRef50_Q6AQA5 Ribosomal RNA large subunit methyltransferase L ... 584 e-165 UniRef50_Q1YPL5 Putative uncharacterized protein n=1 Tax=gamma p... 584 e-165 UniRef50_A5EX48 Ribosomal RNA large subunit methyltransferase L ... 582 e-164 UniRef50_A0L8B5 Ribosomal RNA large subunit methyltransferase L ... 573 e-162 UniRef50_A3JG83 Predicted methyltransferase n=1 Tax=Marinobacter... 569 e-160 UniRef50_C7RA96 Putative RNA methylase n=1 Tax=Kangiella koreens... 565 e-159 UniRef50_Q21JW7 Ribosomal RNA large subunit methyltransferase L ... 560 e-158 UniRef50_B9ZLS0 Putative RNA methylase n=1 Tax=Thioalkalivibrio ... 559 e-157 UniRef50_B0VAL5 Ribosomal RNA large subunit methyltransferase L ... 548 e-154 UniRef50_D2U8T0 Putative rna methylase protein n=1 Tax=Xanthomon... 548 e-154 UniRef50_Q31IC8 Ribosomal RNA large subunit methyltransferase L ... 543 e-153 UniRef50_A4BHH9 Putative uncharacterized protein n=5 Tax=Proteob... 536 e-150 UniRef50_Q2SCH1 Ribosomal RNA large subunit methyltransferase L ... 532 e-149 UniRef50_B0U0U4 Ribosomal RNA large subunit methyltransferase L ... 530 e-148 UniRef50_A6GF98 Putative uncharacterized protein n=2 Tax=Proteob... 517 e-145 UniRef50_B2IA87 Ribosomal RNA large subunit methyltransferase L ... 496 e-139 UniRef50_C8WGP0 THUMP domain protein n=1 Tax=Eggerthella lenta D... 486 e-135 UniRef50_Q1QCP8 Ribosomal RNA large subunit methyltransferase L ... 473 e-132 UniRef50_Q0VQU5 Ribosomal RNA large subunit methyltransferase L ... 448 e-124 UniRef50_A5WGC0 Ribosomal RNA large subunit methyltransferase L ... 448 e-124 UniRef50_B9CL66 Methyltransferase n=1 Tax=Atopobium rimae ATCC 4... 427 e-118 UniRef50_D0KZE4 Putative RNA methylase n=1 Tax=Halothiobacillus ... 424 e-117 UniRef50_C7N0P8 Predicted N6-adenine-specific DNA methylase n=1 ... 415 e-114 UniRef50_C8W7K3 THUMP domain protein n=1 Tax=Atopobium parvulum ... 408 e-112 UniRef50_A4EBB5 Putative uncharacterized protein n=4 Tax=Bacteri... 295 4e-78 UniRef50_C7N3A2 Predicted SAM-dependent methyltransferase n=1 Ta... 281 5e-74 UniRef50_C4FAV8 Putative uncharacterized protein (Fragment) n=2 ... 278 5e-73 UniRef50_Q1DAR2 Putative uncharacterized protein n=2 Tax=Cystoba... 267 8e-70 UniRef50_Q6MHD5 Putative uncharacterized protein n=1 Tax=Bdellov... 266 2e-69 UniRef50_B8FHN3 Putative RNA methylase n=1 Tax=Desulfatibacillum... 265 4e-69 UniRef50_B8GQ82 Oxidoreductase n=26 Tax=Proteobacteria RepID=B8G... 264 9e-69 UniRef50_Q55156 Putative RNA methyltransferase slr0064 n=22 Tax=... 258 5e-67 UniRef50_C9Q0K8 THUMP domain/methyltransferase domain protein n=... 252 3e-65 UniRef50_Q6MPB2 Putative N6-adenine-specific DNA methylase n=1 T... 252 4e-65 UniRef50_A1ARJ2 Putative RNA methylase n=9 Tax=Desulfuromonadale... 250 1e-64 UniRef50_Q04XY1 SAM-dependent methyltransferase n=4 Tax=Leptospi... 249 2e-64 UniRef50_Q7NRS5 Probable oxidoreductase n=1 Tax=Chromobacterium ... 249 2e-64 UniRef50_C0DRY4 Putative uncharacterized protein n=1 Tax=Eikenel... 248 8e-64 UniRef50_C6WWA7 Putative RNA methylase n=2 Tax=Betaproteobacteri... 246 1e-63 UniRef50_D0LH66 Oxidoreductase n=1 Tax=Haliangium ochraceum DSM ... 246 2e-63 UniRef50_B0SEV3 SAM-dependent methyltransferase n=2 Tax=Leptospi... 245 5e-63 UniRef50_UPI0000E87EDF Putative RNA methylase:THUMP n=1 Tax=Meth... 243 1e-62 UniRef50_UPI00016C3D60 hypothetical protein GobsU_18040 n=1 Tax=... 241 5e-62 UniRef50_C7PR68 Methyltransferase type 11 n=1 Tax=Chitinophaga p... 239 2e-61 UniRef50_B4RPC6 Tou5 n=34 Tax=Proteobacteria RepID=B4RPC6_NEIG2 239 3e-61 UniRef50_B6BTD9 N6-adenine-specific DNA methylase n=1 Tax=beta p... 238 7e-61 UniRef50_D1R8Y2 Putative uncharacterized protein n=1 Tax=Parachl... 238 9e-61 UniRef50_Q73LF1 Putative uncharacterized protein n=1 Tax=Trepone... 236 2e-60 UniRef50_Q2YA86 Putative RNA methylase n=3 Tax=Betaproteobacteri... 234 8e-60 UniRef50_B2RJX4 Putative N6-adenine-specific DNA methylase n=2 T... 233 1e-59 UniRef50_Q6MCL8 Putative uncharacterized protein n=1 Tax=Candida... 231 6e-59 UniRef50_B5CV55 Putative uncharacterized protein n=1 Tax=Bactero... 231 9e-59 UniRef50_C3JC56 RNA methylase family protein n=2 Tax=Bacteria Re... 230 2e-58 UniRef50_Q3SES4 N6-adenine-specific DNA methylase n=2 Tax=Betapr... 227 1e-57 UniRef50_A0M2L5 Protein belonging to UPF0020-possibly an RNA met... 223 2e-56 UniRef50_C8PND5 Putative uncharacterized protein n=1 Tax=Trepone... 223 2e-56 UniRef50_A8ZX82 Putative uncharacterized protein n=2 Tax=Desulfo... 221 6e-56 UniRef50_C2MBZ0 THUMP domain protein n=1 Tax=Porphyromonas uenon... 217 1e-54 UniRef50_C2D7E0 N6-adenine-specific DNA methytransferase n=1 Tax... 215 5e-54 UniRef50_Q1DCA8 THUMP domain/methyltransferase domain protein n=... 214 8e-54 UniRef50_A6DTJ8 Putative uncharacterized protein n=1 Tax=Lentisp... 214 1e-53 UniRef50_Q2L074 Putative methylase n=4 Tax=Bordetella RepID=Q2L0... 212 4e-53 UniRef50_Q26FC8 N6-adenine-specific DNA methylase n=20 Tax=Bacte... 209 2e-52 UniRef50_A0Q0L2 Nucleic acid methylase n=6 Tax=Clostridiales Rep... 209 3e-52 UniRef50_Q898M5 Methyltransferase n=2 Tax=Bacteria RepID=Q898M5_... 208 6e-52 UniRef50_A6GTU6 Probable oxidoreductase n=1 Tax=Limnobacter sp. ... 208 6e-52 UniRef50_Q7P2H5 METHYLTRANSFERASE n=10 Tax=Fusobacterium RepID=Q... 207 2e-51 UniRef50_C1CIN4 Methyltransferase n=129 Tax=Bacilli RepID=C1CIN4... 204 7e-51 UniRef50_A8FEF3 Site-specific DNA-methyltransferase (Adenine-spe... 204 8e-51 UniRef50_Q9KC03 BH1771 protein n=3 Tax=Bacillales RepID=Q9KC03_B... 203 2e-50 UniRef50_C0QBT1 Putative RNA methylase family protein n=2 Tax=De... 202 3e-50 UniRef50_A6T245 N6-adenine-specific DNA methylase n=9 Tax=Betapr... 202 5e-50 UniRef50_UPI000169A05C hypothetical protein Epers_10695 n=1 Tax=... 201 7e-50 UniRef50_C5AB46 Predicted N6-adenine-specific DNA methylase n=3 ... 201 7e-50 UniRef50_Q11Q19 RNA methylase family protein n=1 Tax=Cytophaga h... 201 1e-49 UniRef50_C6X0X4 Methyltransferase n=1 Tax=Flavobacteriaceae bact... 200 1e-49 UniRef50_D1RAW3 Putative uncharacterized protein n=1 Tax=Parachl... 199 2e-49 UniRef50_C0YIG9 Probable methylase n=1 Tax=Chryseobacterium gleu... 199 3e-49 UniRef50_A6EAV4 Predicted N6-adenine-specific DNA methylase n=5 ... 199 4e-49 UniRef50_B1CAN9 Putative uncharacterized protein n=1 Tax=Anaerof... 198 5e-49 UniRef50_B7GKR8 Predicted N6-adenine-specific DNA methylase n=8 ... 197 2e-48 UniRef50_C8QZA7 Putative RNA methylase n=1 Tax=Desulfurivibrio a... 196 3e-48 UniRef50_B0TF24 Thump domain protein n=33 Tax=Firmicutes RepID=B... 195 5e-48 UniRef50_A8ZTQ6 Putative RNA methylase n=1 Tax=Desulfococcus ole... 194 8e-48 UniRef50_P50840 Putative RNA methyltransferase ypsC n=152 Tax=Fi... 193 2e-47 UniRef50_Q1NS64 Putative RNA methylase:THUMP n=2 Tax=delta prote... 193 2e-47 UniRef50_A1V086 THUMP domain protein n=52 Tax=Burkholderia RepID... 192 5e-47 UniRef50_B2V4U2 Methyltransferase n=7 Tax=Clostridium RepID=B2V4... 191 1e-46 UniRef50_C5WIH5 Methyltransferase n=45 Tax=Firmicutes RepID=C5WI... 190 1e-46 UniRef50_A6NQS7 Putative uncharacterized protein n=1 Tax=Bactero... 190 1e-46 UniRef50_Q0K713 Predicted N6-adenine-specific DNA methylase n=11... 190 2e-46 UniRef50_C4ZFU5 Nucleic acid methylase n=25 Tax=Firmicutes RepID... 188 5e-46 UniRef50_A8G252 Putative RNA methylase family UPF0020 n=7 Tax=Pr... 187 9e-46 UniRef50_C3WCN4 Methyltransferase n=6 Tax=Fusobacterium RepID=C3... 186 3e-45 UniRef50_Q6MD72 Putative uncharacterized protein n=1 Tax=Candida... 185 4e-45 UniRef50_B0S9B9 N6-adenine-specific DNA methylase n=2 Tax=Leptos... 185 6e-45 UniRef50_A5GQS8 Predicted N6-adenine-specific DNA methylase n=21... 180 2e-43 UniRef50_B8JAH2 Putative RNA methylase n=5 Tax=Myxococcales RepI... 179 5e-43 UniRef50_C7PKB2 Putative RNA methylase n=2 Tax=Sphingobacteriale... 178 6e-43 UniRef50_C9YEX1 Putative uncharacterized protein n=1 Tax=Curviba... 178 8e-43 UniRef50_B9P9P2 Predicted protein n=14 Tax=cellular organisms Re... 176 3e-42 UniRef50_C2KWZ1 Site-specific DNA-methyltransferase (Adenine-spe... 176 4e-42 UniRef50_D2BKU1 RNA methyltransferase n=24 Tax=Lactobacillales R... 175 5e-42 UniRef50_Q2LXZ8 Predicted N6-adenine-specific DNA methylase n=3 ... 174 1e-41 UniRef50_Q1JY11 Putative RNA methylase n=1 Tax=Desulfuromonas ac... 171 9e-41 UniRef50_B0PDR5 Putative uncharacterized protein n=5 Tax=Clostri... 171 1e-40 UniRef50_B5JRH4 Putative RNA methylase family UPF0020 n=1 Tax=Ve... 169 2e-40 UniRef50_D1VVQ9 Protein YpsC n=1 Tax=Peptoniphilus lacrimalis 31... 168 5e-40 UniRef50_A9KSV9 Putative RNA methylase n=26 Tax=Bacteria RepID=A... 167 1e-39 UniRef50_Q3A2B2 Predicted N6-adenine-specific DNA methylase n=1 ... 166 2e-39 UniRef50_Q04TW7 N6-adenine-specific DNA methylase n=4 Tax=Leptos... 164 1e-38 UniRef50_C7I387 Putative RNA methylase n=1 Tax=Thiomonas interme... 164 2e-38 UniRef50_A4XLV3 Putative RNA methylase n=1 Tax=Caldicellulosirup... 163 3e-38 UniRef50_Q311V9 Putative uncharacterized protein n=2 Tax=Desulfo... 162 3e-38 UniRef50_A3UEM0 Putative uncharacterized protein n=1 Tax=Oceanic... 162 4e-38 UniRef50_B1XYJ5 Putative RNA methylase n=1 Tax=Leptothrix cholod... 162 5e-38 UniRef50_B0S0R6 Methyltransferase n=2 Tax=Finegoldia magna RepID... 160 2e-37 UniRef50_Q1CZM0 RNA methylase family protein n=2 Tax=Cystobacter... 159 3e-37 UniRef50_C2BEE4 Site-specific DNA-methyltransferase (Adenine-spe... 159 5e-37 UniRef50_Q0F3C8 Putative uncharacterized protein n=1 Tax=Maripro... 157 2e-36 UniRef50_A8SGD5 Putative uncharacterized protein n=3 Tax=Ruminoc... 156 3e-36 UniRef50_C7HSK3 Methylase n=3 Tax=Anaerococcus RepID=C7HSK3_9FIRM 152 3e-35 UniRef50_B8LLK7 Putative uncharacterized protein n=1 Tax=Picea s... 151 7e-35 UniRef50_A3VSE9 Putative uncharacterized protein n=1 Tax=Parvula... 150 2e-34 UniRef50_B7QQX4 RNA methylase family protein n=35 Tax=Rhodobacte... 148 8e-34 UniRef50_A4SVE4 Putative RNA methylase n=2 Tax=Polynucleobacter ... 147 1e-33 UniRef50_B9MKJ8 Putative RNA methylase n=1 Tax=Anaerocellum ther... 145 5e-33 UniRef50_A0LJ49 Putative RNA methylase n=1 Tax=Syntrophobacter f... 145 7e-33 UniRef50_B8FK67 Putative RNA methylase n=1 Tax=Desulfatibacillum... 143 3e-32 UniRef50_A2SC20 N6-adenine-specific DNA methylase-like protein n... 140 1e-31 UniRef50_C1A5B5 Putative uncharacterized protein n=1 Tax=Gemmati... 138 9e-31 UniRef50_C0QIM2 Putative N6-adenine-specific DNA methylase n=1 T... 132 5e-29 UniRef50_D2EHY6 N6-adenine-specific DNA methylase (Fragment) n=6... 131 9e-29 UniRef50_A4SA02 Predicted protein (Fragment) n=1 Tax=Ostreococcu... 126 3e-27 UniRef50_UPI0001621339 predicted protein n=1 Tax=Physcomitrella ... 125 4e-27 UniRef50_A9GP63 Putative uncharacterized protein n=1 Tax=Sorangi... 123 3e-26 UniRef50_B6GEK4 Putative uncharacterized protein (Fragment) n=2 ... 122 3e-26 UniRef50_B5Y5B8 Predicted protein n=1 Tax=Phaeodactylum tricornu... 122 6e-26 UniRef50_C8PM90 RNA methylase family protein n=2 Tax=Treponema R... 121 8e-26 UniRef50_B5IEU1 Putative RNA methylase n=2 Tax=Aciduliprofundum ... 121 9e-26 UniRef50_B7IFP0 Methyltransferase n=1 Tax=Thermosipho africanus ... 120 2e-25 UniRef50_A8F4G2 Putative RNA methylase n=1 Tax=Thermotoga lettin... 118 8e-25 UniRef50_Q57880 Putative RNA methyltransferase MJ0438 n=5 Tax=Me... 118 8e-25 UniRef50_A6LJF6 Putative RNA methylase n=1 Tax=Thermosipho melan... 117 1e-24 UniRef50_C1E310 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 112 4e-23 UniRef50_A8AXZ7 Methyltransferase n=5 Tax=Streptococcus RepID=A8... 110 1e-22 UniRef50_A7HLT5 Putative RNA methylase n=1 Tax=Fervidobacterium ... 109 3e-22 UniRef50_D0LIJ5 Putative RNA methylase n=1 Tax=Haliangium ochrac... 109 5e-22 UniRef50_Q1Q2N3 Putative uncharacterized protein n=1 Tax=Candida... 108 1e-21 UniRef50_B1ICH9 Methyltransferase n=65 Tax=Streptococcaceae RepI... 107 1e-21 UniRef50_A1AUW2 SAM-dependent methyltransferase n=10 Tax=Desulfu... 107 1e-21 UniRef50_O28105 Putative RNA methyltransferase AF_2178 n=4 Tax=A... 107 2e-21 UniRef50_A6GJE9 Putative uncharacterized protein n=1 Tax=Plesioc... 105 6e-21 UniRef50_A9E6J8 Putative uncharacterized protein n=5 Tax=Bactero... 102 4e-20 UniRef50_D0LV46 Putative RNA methylase n=1 Tax=Haliangium ochrac... 102 4e-20 UniRef50_Q2LSE2 SAM-dependent methyltransferase n=1 Tax=Syntroph... 102 5e-20 UniRef50_Q1D252 Putative uncharacterized protein n=3 Tax=Cystoba... 100 3e-19 UniRef50_C4FU68 Putative uncharacterized protein n=1 Tax=Catonel... 98 1e-18 UniRef50_C9RL63 SAM-dependent methyltransferase-like protein n=1... 98 1e-18 UniRef50_Q3ITL0 Putative uncharacterized protein n=1 Tax=Natrono... 97 2e-18 UniRef50_C2HC77 S-adenosyl-L-methionine-dependent methyltransfer... 96 5e-18 UniRef50_P39587 Putative ribosomal RNA large subunit methyltrans... 95 7e-18 UniRef50_A7NRA9 SAM-dependent methyltransferase n=7 Tax=Bacteria... 95 9e-18 UniRef50_Q6MPD1 Putative methyltransferase n=1 Tax=Bdellovibrio ... 95 1e-17 UniRef50_D2BML1 SAM-dependent methyltransferase n=5 Tax=Lactobac... 94 1e-17 UniRef50_Q1N6E7 Predicted SAM-dependent methyltransferase n=1 Ta... 94 2e-17 UniRef50_Q2IGQ5 Putative RNA methylase n=4 Tax=Anaeromyxobacter ... 94 3e-17 UniRef50_C1SIB7 Predicted SAM-dependent methyltransferase n=1 Ta... 93 4e-17 UniRef50_Q6MNN8 Pseudouridine synthase n=1 Tax=Bdellovibrio bact... 92 5e-17 UniRef50_Q12JE5 Ribosomal RNA large subunit methyltransferase I ... 92 5e-17 UniRef50_A6GJS5 Putative uncharacterized protein n=1 Tax=Plesioc... 92 5e-17 UniRef50_Q2IKG3 SAM-dependent methyltransferase n=6 Tax=Cystobac... 92 1e-16 UniRef50_A0KKF0 Ribosomal RNA large subunit methyltransferase I ... 92 1e-16 UniRef50_Q7MSX4 Putative uncharacterized protein n=1 Tax=Wolinel... 92 1e-16 UniRef50_B2UNS4 Putative uncharacterized protein n=1 Tax=Akkerma... 91 1e-16 UniRef50_Q1J0R3 SAM-dependent methyltransferase containing PUA d... 91 1e-16 UniRef50_A3J3C9 Putative uncharacterized protein n=1 Tax=Flavoba... 91 1e-16 UniRef50_B5XY38 Ribosomal RNA large subunit methyltransferase I ... 91 1e-16 UniRef50_B9XS18 Pseudouridine synthase n=1 Tax=bacterium Ellin51... 91 2e-16 UniRef50_D0LSU7 Putative RNA methylase n=1 Tax=Haliangium ochrac... 91 2e-16 UniRef50_B2UZQ1 Methyltransferase n=3 Tax=Clostridium botulinum ... 90 3e-16 UniRef50_A5IRW8 SAM-dependent methyltransferase-like protein n=6... 90 4e-16 UniRef50_C1ZF95 Predicted SAM-dependent methyltransferase n=1 Ta... 90 4e-16 UniRef50_UPI00017455E0 hypothetical protein VspiD_12680 n=1 Tax=... 89 4e-16 UniRef50_C8NHK6 SAM (And some other nucleotide) binding motif, P... 89 5e-16 UniRef50_Q7ND71 Glr4365 protein n=1 Tax=Gloeobacter violaceus Re... 89 7e-16 UniRef50_Q6AKZ6 Putative uncharacterized protein n=1 Tax=Desulfo... 89 9e-16 UniRef50_B0S9E6 SAM-dependent methyltransferase n=2 Tax=Leptospi... 88 1e-15 UniRef50_Q6MCD2 Putative uncharacterized protein n=1 Tax=Candida... 88 1e-15 UniRef50_B5F1W3 Ribosomal RNA large subunit methyltransferase I ... 88 1e-15 UniRef50_UPI00016C4550 methyltransferase n=1 Tax=Gemmata obscuri... 87 2e-15 UniRef50_Q2BMG3 Putative uncharacterized protein n=1 Tax=Neptuni... 87 2e-15 UniRef50_B8CIJ5 SAM-dependent methyltransferase, putative n=27 T... 87 2e-15 UniRef50_Q11NR8 SAM-dependent methyltransferase n=1 Tax=Cytophag... 87 2e-15 UniRef50_A8VSD5 Oligopeptide/dipeptide ABC transporter, ATPase s... 87 3e-15 UniRef50_A8J6H0 Predicted protein (Fragment) n=1 Tax=Chlamydomon... 87 3e-15 UniRef50_B4CUH2 SAM-dependent methyltransferase-like protein n=1... 87 3e-15 UniRef50_B3QNQ6 PUA domain containing protein n=12 Tax=Chlorobia... 86 5e-15 UniRef50_B7FV41 Predicted protein n=1 Tax=Phaeodactylum tricornu... 86 5e-15 UniRef50_A6FZT8 SAM-dependent methyltransferase n=1 Tax=Plesiocy... 86 6e-15 UniRef50_B2V9T0 Methyltransferase small n=4 Tax=Bacteria RepID=B... 86 7e-15 UniRef50_Q4U8N8 Methylase, putative n=1 Tax=Theileria annulata R... 85 8e-15 UniRef50_C6XXB0 PUA domain containing protein n=4 Tax=Sphingobac... 85 9e-15 UniRef50_A5K8W7 Putative uncharacterized protein n=1 Tax=Plasmod... 84 2e-14 UniRef50_B5YLZ7 Predicted protein n=1 Tax=Thalassiosira pseudona... 84 3e-14 UniRef50_Q1IYC7 SAM dependent methyltransferase n=3 Tax=Deinococ... 83 3e-14 UniRef50_C7GB40 Methyltransferase n=13 Tax=Bacteria RepID=C7GB40... 83 4e-14 UniRef50_A3DM75 Putative RNA methylase n=1 Tax=Staphylothermus m... 83 4e-14 UniRef50_A8DJY9 SAM-dependent methyltransferase n=2 Tax=Bacteria... 82 5e-14 UniRef50_B0N335 Putative uncharacterized protein n=3 Tax=Bacteri... 82 7e-14 UniRef50_C7N186 SAM-dependent methyltransferase n=13 Tax=Bacteri... 82 7e-14 UniRef50_Q0ABR6 SAM-dependent methyltransferase n=15 Tax=Gammapr... 82 9e-14 UniRef50_A8F4H7 Putative uncharacterized protein n=1 Tax=Thermot... 81 1e-13 UniRef50_A6Q436 Putative uncharacterized protein n=1 Tax=Nitrati... 81 1e-13 UniRef50_C6NWD6 LSU m5C1962 methyltransferase RlmI n=1 Tax=Acidi... 81 2e-13 UniRef50_O67850 Putative uncharacterized protein n=2 Tax=Aquific... 80 2e-13 UniRef50_D2QYD2 Putative uncharacterized protein n=1 Tax=Pirellu... 80 2e-13 UniRef50_B3DWI3 SAM-dependent methyltransferase n=1 Tax=Methylac... 80 2e-13 UniRef50_C9L1Z6 PUA domain protein n=33 Tax=Bacteria RepID=C9L1Z... 80 3e-13 UniRef50_A9GQV8 Putative uncharacterized protein n=1 Tax=Sorangi... 80 3e-13 UniRef50_B3PK12 Predicted SAM-dependent methyltransferase n=1 Ta... 80 3e-13 UniRef50_B5EPR2 Methyltransferase small n=2 Tax=Acidithiobacillu... 80 3e-13 UniRef50_Q3JX99 Predicted SAM-dependent methyltransferases n=55 ... 79 6e-13 UniRef50_C0QT70 Methyltransferase n=2 Tax=Hydrogenothermaceae Re... 79 6e-13 UniRef50_B7G017 Predicted protein n=2 Tax=Bacillariophyta RepID=... 79 6e-13 UniRef50_Q5SIT4 Putative uncharacterized protein TTHA1280 n=2 Ta... 79 6e-13 UniRef50_Q30R89 Putative uncharacterized protein n=2 Tax=Campylo... 79 7e-13 UniRef50_Q3A0J1 Predicted SAM-dependent methyltransferases n=2 T... 78 1e-12 UniRef50_Q59047 Putative ribosomal RNA large subunit methyltrans... 78 1e-12 UniRef50_C9MRP3 Methyltransferase n=7 Tax=Prevotella RepID=C9MRP... 78 1e-12 >UniRef50_A6VMR3 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Gammaproteobacteria RepID=RLML_ACTSZ Length = 676 Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/715 (57%), Positives = 520/715 (72%), Gaps = 57/715 (7%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M LFA+ ARG EELLKTEL LGA + ++ QGGVHF D Y++L+WSRLASRI+LP Sbjct: 1 MKPLFATCARGFEELLKTELTELGAQDVRIAQGGVHFGADDETQYKTLLWSRLASRILLP 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + + K+YSDLDLY V + W E F+ F V F+G N IR+SQ+GAM+VKD IVD F Sbjct: 61 IAQSKIYSDLDLYSTVVSQAWLEHFDERTHFFVDFNGTNREIRHSQFGAMRVKDGIVDYF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 R RPNVD++ PD+R++ +L+++ ++LDLSG+ LH+RGYR+ +G AP++ETLAAA Sbjct: 121 ERHGKARPNVDKENPDVRIHAYLNRDDLILSLDLSGEALHMRGYREDSGQAPLRETLAAA 180 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +V+RSGWQ GTPL+DPMCGSGTLLIEAA + AP LHR WGF W H++A+W++VK Sbjct: 181 LVLRSGWQKGTPLVDPMCGSGTLLIEAAQMEAQIAPQLHRSHWGFDFWKGHNQAVWEKVK 240 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 AEA A + + NPL Sbjct: 241 AEAVALAEAQMEK------------------------------------------NPLRN 258 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G GTVL NPPYGERL + PALIAL+S+ G+ +K QFGGWN+S+FS+ LL CL++R+ Sbjct: 259 GEKGTVLCNPPYGERLGTTPALIALYSVFGQRLKQQFGGWNVSVFSSEQGLLDCLRMRSF 318 Query: 361 KQYKAKNGPLDCVQKNYHVAESTP---------------DSKPAMVAEDYTNRLRKNLKK 405 +Q+KAKNGPLDCVQKNY +++ + DS VA D+ NRL+KN+KK Sbjct: 319 RQFKAKNGPLDCVQKNYRISDRSSVQTDERAAENPAVSADSAHTDVATDFANRLQKNIKK 378 Query: 406 FEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAA 465 EKWA+Q+G++ YRLYDADLP+YN+AVDRY D +VVQEYA PK ID +K RQRL D + A Sbjct: 379 IEKWAQQQGLDAYRLYDADLPDYNLAVDRYGDHIVVQEYAAPKNIDENKTRQRLLDAVTA 438 Query: 466 TISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLD 525 T++V G+ +KL+LK R +QKG NQY+KL KGE+ VTEY A LWVNLTDYLDTGLFLD Sbjct: 439 TLAVTGVETSKLILKVRRKQKGSNQYEKLANKGEYFYVTEYGAKLWVNLTDYLDTGLFLD 498 Query: 526 HRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNG 585 HR+ R+MLG+M+K KDFLNLF+YTGSATVHA LGGA+STTTVDMS TYL WAE+NL LN Sbjct: 499 HRLTRKMLGEMAKDKDFLNLFAYTGSATVHAALGGAKSTTTVDMSNTYLNWAEQNLILND 558 Query: 586 LTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRL 645 + G+ H+LIQADCL WL ++QFDLIF+DPPTFSNSKRMED++DVQRDH+ LMK+LKR+ Sbjct: 559 VDGKRHKLIQADCLQWLMRCDKQFDLIFVDPPTFSNSKRMEDSWDVQRDHIKLMKNLKRI 618 Query: 646 LRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLIT 700 LR GTI+FSNNKRGF+MD DGLA+LGL A EI+ KTL DF RN+QIHNCWL+T Sbjct: 619 LRPNGTIVFSNNKRGFKMDFDGLAQLGLNALEISAKTLPLDFERNKQIHNCWLLT 673 >UniRef50_A4SME4 Ribosomal RNA large subunit methyltransferase L n=273 Tax=Gammaproteobacteria RepID=RLML_AERS4 Length = 719 Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust. Identities = 420/715 (58%), Positives = 513/715 (71%), Gaps = 15/715 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M FA+ +GLE LL EL LGA + + GVHFKG+ + Y++ +WSR ASRI+L Sbjct: 1 MKEFFATCPKGLENLLADELTTLGAEQVRETVAGVHFKGELAIGYKACLWSRFASRIVLV 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L E ++ DLDLYLG I W E F+ +T AV F+G N IRN+QYGA+K+KDAIVD F Sbjct: 61 LSEFQMNDDLDLYLGAHTIPWEEHFSGTSTIAVDFTGTNPAIRNTQYGALKIKDAIVDRF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 T++ RP+VD+ APDIR+ L K A+I LDLSG LH R YR G AP+KE LA A Sbjct: 121 TKRGHVRPDVDKKAPDIRIMAHLGKGKANITLDLSGPALHQRFYRQGTGEAPLKENLACA 180 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 ++ RSGW G P++DPMCGSGTLLIEAA +A D AP L R R+GF W QHD +WQ + Sbjct: 181 MIARSGW-AGEPMMDPMCGSGTLLIEAAFIAADMAPALRRERFGFDRWLQHDSELWQSLM 239 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 EAQ RA++G+ +G D+D RV+ +AR NA+ AG+ LITF+ DV QL NPLP Sbjct: 240 MEAQVRAKRGMQRCEVKLFGCDADPRVLMKARDNAKAAGVAHLITFKQADVTQLENPLPM 299 Query: 301 GPY-------------GTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSA 347 G ++SNPPYGERL PAL+ +H LG ++ F GW +S+ SA Sbjct: 300 PAVVEGEVSQEEARQVGMLISNPPYGERLGEFPALLEVHQALGDALRRGFQGWRVSILSA 359 Query: 348 SPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFE 407 SP+LLSCL+LRADKQY+ NG L+C +NY +A + S+ VA+D+ NRLRKNLK E Sbjct: 360 SPELLSCLRLRADKQYRLFNGALECQLRNYQIALDSVASQKE-VAQDFANRLRKNLKTLE 418 Query: 408 KWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATI 467 KWA +EGI+CYRLYDADLPEYN A+DRY D++VVQEYA PK I A K RQRL D++ A I Sbjct: 419 KWASKEGIDCYRLYDADLPEYNAAIDRYQDYLVVQEYAAPKDIPAQKTRQRLLDMVQAAI 478 Query: 468 SVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHR 527 V G+ K++LK RERQ+GK QYQKL + +EV EY A LWVNL DYLDTGLFLDHR Sbjct: 479 KVTGMDGEKVILKVRERQEGKQQYQKLAAEQHRMEVQEYGARLWVNLYDYLDTGLFLDHR 538 Query: 528 IARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT 587 RRMLGQM+KGK FLNLF+YTGSATVHAGLGGA TTTVDMS TYL WA+ N+RLN L Sbjct: 539 QTRRMLGQMAKGKRFLNLFAYTGSATVHAGLGGASETTTVDMSHTYLNWAQDNMRLNSLV 598 Query: 588 GRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLR 647 GR H+ +QADCL WL EA++Q+DLIFIDPPTFSNSKRM+++FDVQRDHL LM+ LKRLL Sbjct: 599 GRQHKFVQADCLKWLSEADDQYDLIFIDPPTFSNSKRMDESFDVQRDHLLLMQHLKRLLA 658 Query: 648 AGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITAA 702 A GT++FSNNKR F+MDL GL GLKAQ IT KT +DF RN+ IHNCW+IT A Sbjct: 659 ADGTLVFSNNKRHFKMDLAGLEAAGLKAQNITSKTRPKDFERNQHIHNCWIITHA 713 >UniRef50_A1SX09 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Psychromonas RepID=RLML_PSYIN Length = 749 Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/748 (49%), Positives = 491/748 (65%), Gaps = 51/748 (6%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M S F TA+GL LL+ EL+ +G Q + GGV F+G Y+ +WSR ASR++L Sbjct: 1 MLSYFIPTAKGLAPLLEVELKEMGIENPQQMNGGVKFEGTLEQGYKVCLWSRFASRVLLK 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L E KV +DLYLG I W F+ TF++ FSG ND IRN+Q+GA+K+KDAIVD F Sbjct: 61 LSEFKVLDSMDLYLGCSNIPWETHFDVDKTFSIDFSGTNDEIRNTQFGALKIKDAIVDRF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + RPNV + DIR N L K+ A+I LDLSG LHLRGYR AG AP++ETLAA Sbjct: 121 RKHFDERPNVQKRDADIRFNGRLWKDKATIYLDLSGSPLHLRGYRTIAGEAPLRETLAAG 180 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 I+ RSGWQ G LLDPMCGSGTL+IEAAM+A + APG R +GF W +HD+ WQ +K Sbjct: 181 IIKRSGWQ-GEALLDPMCGSGTLVIEAAMMALNIAPGSLRETFGFEKWKKHDQECWQTLK 239 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 AQ R+ + + + FYGSD +I+ AR NA+ AG+GE+I F V D ++ P + Sbjct: 240 TSAQVYGRRAVNQCETRFYGSDLSKDMIEIARKNAQRAGVGEVIEFSVTDAKKVLPP-EE 298 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G +++NPPYGERL S I L++ LG K+ F GWNLS+F+ +LLSCL +RA Sbjct: 299 LETGMLITNPPYGERLGSFSDTITLYTELGYHFKDAFAGWNLSMFAMDTELLSCLGMRAG 358 Query: 361 KQYKAKNGPLDCVQKNYHVA-----------------ESTPDS----------------- 386 K +K NGP++CV KNY ++ + TP+ Sbjct: 359 KSFKFFNGPIECVLKNYRISPKRPAVEVEPVAPKKTNKETPEPINPWTMGQNESVVEAAI 418 Query: 387 --------------KPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAV 432 KPA+ AE++ NRL KNLK+ EKWA++EG+ECYRLYDADLPEYNVA+ Sbjct: 419 ENESELVFKEVQQIKPAIYAEEFANRLLKNLKQLEKWAKREGVECYRLYDADLPEYNVAI 478 Query: 433 DRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQ 492 DRYA+++++QEY PK I+ K R+R D+++ VL + +KLV+K RERQKG+ QY+ Sbjct: 479 DRYAEYIIIQEYRAPKEIETQKVRRRFLDVVSTVRYVLNLPDDKLVIKVRERQKGRQQYE 538 Query: 493 KLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSA 552 KL K + L V E A + VNL DYLDTGLFLDHR R ++G M+KGKDFLNLF YT +A Sbjct: 539 KLDTKKQSLVVHEGQAKMLVNLQDYLDTGLFLDHRPTRLLIGNMAKGKDFLNLFCYTATA 598 Query: 553 TVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLI 612 +VHA LGGA+STT+VDMS+TYL W E N NG+ G+ H IQ DC+ WL+ A+E +DLI Sbjct: 599 SVHAALGGAKSTTSVDMSKTYLAWGEDNFAENGIKGK-HEFIQQDCIKWLQHAHEMYDLI 657 Query: 613 FIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLG 672 FIDPPTFSNSKRM D FDVQ DH+AL+ + L G I+FSNNKRGF++D+D + LG Sbjct: 658 FIDPPTFSNSKRMNDVFDVQEDHVALLTSASQRLNKQGEIIFSNNKRGFKLDVDAIKALG 717 Query: 673 LKAQEITQKTLSQDFARNRQIHNCWLIT 700 ++I+Q ++ +DF RN++IH CW++T Sbjct: 718 FYIKDISQSSIPEDFRRNKKIHQCWILT 745 >UniRef50_A1S601 Ribosomal RNA large subunit methyltransferase L n=7 Tax=Gammaproteobacteria RepID=RLML_SHEAM Length = 708 Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/713 (52%), Positives = 480/713 (67%), Gaps = 20/713 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M + FA+ +G E L ELE LGA + GV+F YQ +W+RLASRI+L Sbjct: 1 MFNFFAAAPKGFEYALAKELETLGAENVRESVAGVYFSASLAQGYQITLWTRLASRIVLI 60 Query: 61 L--GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVD 118 L GEC+ S LY I+W F+ +TF++ F G I NSQ+GA+K+KDA+VD Sbjct: 61 LFTGECQ--SAEQLYNAAYTIDWPSHFSNRSTFSIDFHGTGGFINNSQFGALKIKDAVVD 118 Query: 119 AFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLA 178 F +L RP+V + PD+R++ + +I ++ SG LH RGYR G AP+KE LA Sbjct: 119 RFRDDDLSRPDVVKGHPDMRIDAHYGRGKITIGINFSGAALHQRGYRGNTGEAPLKENLA 178 Query: 179 AAIVMRSGW--QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 A ++ RSGW P T LLDP CGSGT+LIEAA++A D APGL R R+GF W +HD+A+W Sbjct: 179 ANMLYRSGWADNPVT-LLDPFCGSGTVLIEAALMACDIAPGLMRERFGFEHWRRHDQALW 237 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 Q+V EA+ RA G FYGSD D+RV+ A+ NA AG+ + I F+V + L Sbjct: 238 QQVIEEAKARASLGKTRCQLKFYGSDIDSRVVALAKRNANSAGVFDFIDFKVANALNLEP 297 Query: 297 PLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQ 356 P+ +G VL+NPPYGERL + +L+ L+ LG K +GGW L L + +L+S L+ Sbjct: 298 PVAEG---MVLTNPPYGERLGNVTSLLQLYFQLGEKFKQSYGGWKLGLLCSDMELVSSLK 354 Query: 357 LRADKQYKAKNGPLDCVQKNYHV-AESTPDSKP-------AMVAEDYTNRLRKNLKKFEK 408 L+ADKQ K NG L+C Y + A ST P +A + NRL+KNLK+ EK Sbjct: 355 LKADKQMKMYNGALECAFNLYTLHATSTRRDIPVDTTGQGGEIAAPFANRLKKNLKQLEK 414 Query: 409 WARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATIS 468 WA++EGI+ YRLYDAD+PEYNVAVDRY D+VVVQEYA P I ++RL D++ A Sbjct: 415 WAKREGIDSYRLYDADIPEYNVAVDRYLDYVVVQEYAAPSAIPEAVTKRRLTDVLLALPR 474 Query: 469 VLGIAPNKLVLKTRERQKGKNQYQKL-GEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHR 527 LGI P+K+VLKTRERQKG NQYQKL GEK E L TEY +NLTDYLDTGLFLDHR Sbjct: 475 ALGIDPDKIVLKTRERQKGTNQYQKLDGEKLE-LVTTEYGCSFKLNLTDYLDTGLFLDHR 533 Query: 528 IARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT 587 + R+++G+ +K +D LNLF+YTGSA+VHAG GGA+S TTVDMS TYL WA+ N LNGL Sbjct: 534 LTRKLVGEKAKNRDVLNLFAYTGSASVHAGKGGAKSVTTVDMSNTYLNWAKDNFMLNGLI 593 Query: 588 GRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLR 647 GR ++ QADCL W+R+ QFDLIFIDPPTFSNSKRMED+FDVQRDH+ L+ LK+LLR Sbjct: 594 GRQYQFEQADCLQWIRDCERQFDLIFIDPPTFSNSKRMEDSFDVQRDHVDLLASLKKLLR 653 Query: 648 AGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLIT 700 GG I+FSNNKR F+MD++ LA GLKA I K L D+ARN QIHNCW++T Sbjct: 654 PGGEIVFSNNKRKFKMDMEALAAAGLKAVNIDDKVLPMDYARNPQIHNCWVVT 706 >UniRef50_Q0HJZ9 Ribosomal RNA large subunit methyltransferase L n=21 Tax=Alteromonadales RepID=RLML_SHESM Length = 713 Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/716 (49%), Positives = 470/716 (65%), Gaps = 17/716 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M + FA+ +G E L EL GA E + GV+F L Y+ +W+RLASRI+L Sbjct: 1 MLNFFAAAPKGFEYSLAQELTEFGATEIKESVAGVYFTAPLALAYRITLWTRLASRIVLV 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + + S LY I+W+ F+ TF++ F G I N+Q+GA+K+KDAIVD F Sbjct: 61 IYKGPCESAEQLYNAAYCIDWSSHFSNRNTFSIDFHGTGGFINNTQFGALKIKDAIVDRF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RPNV R DI+++ +IA++ SG LH RGYR G AP+KE LAA Sbjct: 121 RDDGDARPNVARIDADIKIDAHFRNGVITIAMNFSGPSLHQRGYRSTTGEAPLKENLAAN 180 Query: 181 IVMRSGWQPG-TPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 +++RSGW+ T LLDP CGSGT+LIEAA++A D APGL R R+GF W +HD+A W E+ Sbjct: 181 MLVRSGWKAAPTTLLDPFCGSGTVLIEAALMAADIAPGLQRSRFGFEHWRRHDKATWHEI 240 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 EA+ RA G+ FYGSD D+R++ A+ NA+ AG+ ELI F+V A N P Sbjct: 241 LEEAKARASLGVKRCDVKFYGSDIDSRLVALAKRNAQNAGVLELIDFKV---ANALNVEP 297 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 G +++NPPYGERL S L+ L+ LG K +FGGW +++ + +L+S L+L+A Sbjct: 298 PAGEGYLITNPPYGERLGSVSELLQLYYQLGDKFKKEFGGWKVAMLCSDIELISALKLKA 357 Query: 360 DKQYKAKNGPLDCVQKNYHV-AESTPDSKPAM--------VAEDYTNRLRKNLKKFEKWA 410 DKQ K NG L+C Y + A+ST P + +A + NR++KN K+ EKWA Sbjct: 358 DKQMKMFNGALECAFNLYTLHAQSTRRDTPVLPEGVDIADIAPAFANRIKKNAKQLEKWA 417 Query: 411 RQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVL 470 ++EGI+ YRLYDAD+PEYNVAVDRY D +VVQEY P +I ++RL D++ A + + Sbjct: 418 KKEGIDSYRLYDADIPEYNVAVDRYLDHIVVQEYMAPASIPEAVTKRRLSDVLLALPAAI 477 Query: 471 GIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIAR 530 G+ P+K+ +KTRERQKG NQYQKL E+ L TEY A +NLT YLDTGLFLDHR+ R Sbjct: 478 GVDPHKITMKTRERQKGTNQYQKLDERKLELITTEYGAKFKLNLTGYLDTGLFLDHRLTR 537 Query: 531 RMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRA 590 R++GQ SKG+ LNLFSYTGSA+VHA LGGA+S TTVDMS TYL WA+ N LN L+G+ Sbjct: 538 RLVGQKSKGRRVLNLFSYTGSASVHAALGGAKSVTTVDMSNTYLAWAKENFALNDLSGKQ 597 Query: 591 HRLIQADCLAWLREA----NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLL 646 + +QADCL W+R++ + Q+DLIFIDPPTFSNSKRMED+FDVQRDH+ L+ L +LL Sbjct: 598 YEFVQADCLQWIRDSALDKSAQYDLIFIDPPTFSNSKRMEDSFDVQRDHVNLLGMLIKLL 657 Query: 647 RAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITAA 702 G I+FSNNKR F+MD + LAK+ +K + I TL D+ RN IHN WLIT A Sbjct: 658 SPNGEIVFSNNKRKFKMDTETLAKMKIKVENIDDLTLPMDYKRNPHIHNTWLITHA 713 >UniRef50_P57444 Ribosomal RNA large subunit methyltransferase L n=4 Tax=Buchnera aphidicola RepID=RLML_BUCAI Length = 701 Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/701 (48%), Positives = 482/701 (68%), Gaps = 6/701 (0%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 MN LFAST G E+LL+ EL +LG + ++++GG+++K + L+Y+SLMWSR+ASRI L Sbjct: 1 MNDLFASTNFGTEKLLEKELLSLGVSDIKIIKGGIYYKSNDLLLYKSLMWSRIASRIYLC 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + + + DLY V +INWTE+F+ TF V+F G N+ IRNS +GA+ KDAI+D F Sbjct: 61 IKIFTINNIDDLYDHVYSINWTEIFHIHNTFLVNFKGTNNFIRNSLFGALVTKDAIIDQF 120 Query: 121 TRKNLPRPNVDRDAPDIRVN-VWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAA 179 K RPNV+ PDIR+ V L+ I LDLSG+ L+ RGYR PIKE LA Sbjct: 121 QNKYASRPNVNLIEPDIRIKLVLLNNNILHIMLDLSGEPLNKRGYRQFYNTTPIKENLAT 180 Query: 180 AIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 AIV+ SGW TP++DPMCGSGT LIEAAM+++DRAPGL R +WGF W ++++ +W++V Sbjct: 181 AIVLSSGWNENTPMIDPMCGSGTFLIEAAMISSDRAPGLKRLKWGFQFWKKYNKNLWKKV 240 Query: 240 KAEAQTRARKGLAE-YSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 EA+ + + G+ + + ++F G D D +I++A+ NA AG+ ++I F KDV L N Sbjct: 241 LEEAEEKFKIGIKKCFQNYFIGYDYDPEIIKKAKKNASNAGVLKIIQFLTKDVNNLKNVY 300 Query: 299 PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 K G +LSNPPYGER +E L+ L+ LG K F W LS+FSAS LL LQ++ Sbjct: 301 HKEQEGIILSNPPYGERYQTENKLVGLYVQLGITAKKYFKNWKLSIFSASTFLLDFLQMQ 360 Query: 359 ADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECY 418 + ++Y KNGPL+C+QKN+ + ++ ++ +RL KN KK +KW E +E + Sbjct: 361 SHEKYFFKNGPLNCIQKNFLIFFKNS----SITTNEFKDRLNKNFKKLKKWINSEKLESF 416 Query: 419 RLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLV 478 R+Y ADLP YN+ VD Y WVV+QEY PK+ID +KA +RL D I T VL I+ N +V Sbjct: 417 RVYHADLPNYNIIVDVYDKWVVIQEYQAPKSIDHNKAFKRLCDAIYYTKEVLSISINNIV 476 Query: 479 LKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSK 538 LKTR + K K QY+KL +F+ + EY+A VNLTDY+DTGLF D R+ R++LG ++K Sbjct: 477 LKTRIKNKNKTQYKKLFNSNDFITIKEYHAKFLVNLTDYVDTGLFSDKRLVRKLLGVLAK 536 Query: 539 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADC 598 GKDFLNLFSYTG+ATV+AGLG A STT+VD+S TY++W+ RN+ LN LT H IQ DC Sbjct: 537 GKDFLNLFSYTGTATVYAGLGHANSTTSVDISNTYIKWSARNMSLNNLTSSQHNFIQYDC 596 Query: 599 LAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 658 L W+++ N++FDLIFI+PPTFSNSK+M+ +FD++RD+L +M LK++LR GTI+FS++ Sbjct: 597 LKWIKKTNQKFDLIFINPPTFSNSKKMQQSFDLKRDYLDVMIHLKKILRHDGTIIFSSST 656 Query: 659 RGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 R F ++ + + K+ L A++IT K S+D +N I++ WLI Sbjct: 657 RNFEINFNCIKKMQLHAKKITNKIQSKDHLKNSNIYHSWLI 697 >UniRef50_Q47Z09 Ribosomal RNA large subunit methyltransferase L n=1 Tax=Colwellia psychrerythraea 34H RepID=RLML_COLP3 Length = 715 Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/705 (46%), Positives = 456/705 (64%), Gaps = 11/705 (1%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 A T+ G+E LL E+++LGA GV+F+ L Y+ +W+RLA+RIML LGE Sbjct: 8 FLALTSPGIEVLLFDEIKSLGAFNVIQKPEGVYFQASLALGYKISLWTRLATRIMLKLGE 67 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 + +L+ +INW ++F TFAV F G ++ IRNSQ+G + +KDAIVD F + Sbjct: 68 GEAKDKDELFKAASSINWPDIFKSTTTFAVDFVGYSEEIRNSQFGGLTIKDAIVDQFRDQ 127 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 RPNVD+ AP I L ++ +I LD SG GL RGYR+ +G AP+KE LAAA+++ Sbjct: 128 GFERPNVDKKAPQISFQARLLRDNVTIFLDFSGRGLFQRGYREHSGAAPLKENLAAALII 187 Query: 184 RSGWQPGT--PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 RSGW T PL+DPMCGSGT+LIEA +A +AP ++R WGF W HD A+WQ+ Sbjct: 188 RSGWLNDTSKPLVDPMCGSGTILIEAVSMAAKQAPAINRQSWGFEAWLSHDNAVWQKQLT 247 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 A + + ++ +G D D RV++ A+ NAR A + + I F K+ + N G Sbjct: 248 LAIDSSEENMSNLKVKVFGIDIDERVLRTAQQNARNAQLHQYIEFTCKNTNDMDNTF--G 305 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 GT+L NPPYGER+ P L+ L G+ +K QF W +++ +A+ DLLS L+L + K Sbjct: 306 QPGTILFNPPYGERIGELPELVENFVLFGQKLKMQFKDWRIAILTANVDLLSMLKLSSFK 365 Query: 362 QYKAKNGPLDCVQKNYHV-----AESTPDSKPAMVAED--YTNRLRKNLKKFEKWARQEG 414 +YK KNGPLDC Y++ A+ + + ED + NRL+KN K + W + Sbjct: 366 RYKFKNGPLDCQLALYNLDAKQGAKDAINPQSDFAEEDSAFANRLKKNRKNLKGWLKSNE 425 Query: 415 IECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAP 474 IE YRLYD D+PEYNVA+D Y +++V+QEYA PKTI+ KA++RL ++I VL I Sbjct: 426 IEAYRLYDGDIPEYNVAIDIYGEYLVIQEYAAPKTIEEDKAKKRLQEVIYWAPKVLNIPT 485 Query: 475 NKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLG 534 +K++LKTR +Q+G NQY++L + + L + E+ A +NL DYLDTGLFLDHR R+++ Sbjct: 486 DKVILKTRAKQRGANQYERLEKTKQSLTINEHGALFKINLWDYLDTGLFLDHRKTRQIVA 545 Query: 535 QMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLI 594 + S+GK LNLF+YTGS +V A + GA S TTVDMS TYL WAE N LN L G ++ I Sbjct: 546 KKSQGKSLLNLFAYTGSVSVQAAVQGAASITTVDMSNTYLNWAEDNFALNKLNGHKYQFI 605 Query: 595 QADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMF 654 QADCL WL++ +FD+IFIDPPTFSNSKRMED+FDVQRDH+ L+ D + L GG I F Sbjct: 606 QADCLDWLKKNVNKFDVIFIDPPTFSNSKRMEDSFDVQRDHVDLITDALKSLNRGGEIFF 665 Query: 655 SNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 +NNKR F++D + L +LGL A+ ++ T +DFARN+ IHN W I Sbjct: 666 TNNKRNFKIDFEALDELGLTAEAMSDVTRDKDFARNKHIHNSWSI 710 >UniRef50_B4RZ48 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Alteromonas macleodii RepID=RLML_ALTMD Length = 699 Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/704 (46%), Positives = 455/704 (64%), Gaps = 12/704 (1%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQG--GVHFKGDTRLVYQSLMWSRLASRIM 58 MN++ +T+RGL+ELLK E+ L + Q+ QG + F+G Y+ +WSRLA+R++ Sbjct: 1 MNTILVTTSRGLDELLKQEVLTL-CPDAQIKQGPGTIQFEGSKEDAYKLCLWSRLANRVI 59 Query: 59 LPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVD 118 L K LY I+W + T +V F G N I+N+Q+GA++VKDAIVD Sbjct: 60 WVLASGKAGDAEALYNTAMGIDWQMQMDSRHTLSVQFIGTNFAIKNTQFGAVRVKDAIVD 119 Query: 119 AFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLA 178 +F + LPRP+V+R PDI V LH++ + +DL+G LH R YR G AP+KE +A Sbjct: 120 SFVEQGLPRPSVERKTPDISVYARLHRDNVILGIDLAGASLHQRAYRQETGDAPLKEHIA 179 Query: 179 AAIVMRSGWQPGT--PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 +A++MRSGW T PL+D MCGSGT+ IEAA +A + APG+ R WGF+ W H+ +W Sbjct: 180 SAMLMRSGWTENTDAPLVDLMCGSGTIAIEAAYIARNIAPGIKRSYWGFTKWLGHEATLW 239 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 + +A + + Y D +++ A+ NA AG+ I+F +D + + Sbjct: 240 DSLLEDAISVQKPSCG---GGIYAGDFSRKMVAIAKANADFAGVFNDISFSQQDATKSSP 296 Query: 297 PLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQ 356 P+ Y V+SNPPYGERL +LI L S G+ K + GW++SL S++ DLL L+ Sbjct: 297 PVATPGY--VVSNPPYGERLGELTSLIPLFSDWGKRFKEAWKGWHVSLLSSNRDLLRVLK 354 Query: 357 LRADKQYKAKNGPLDCVQKNYHVAE-STPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGI 415 LRA K Y NG L+C NY + E +T ++ NRL+KNLK+ + W + Sbjct: 355 LRATKDYAMNNGKLECRLANYVLDEQNTVQFSEDAGNHEFANRLKKNLKRMKGWVKSANT 414 Query: 416 ECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPN 475 CYR+YDADLP+YNVAVDRY DW+VVQEYAPPKT+ KAR+RL +++ +V G++P Sbjct: 415 NCYRIYDADLPDYNVAVDRYGDWLVVQEYAPPKTVSEDKARKRLQEVLLHLPAVTGVSPK 474 Query: 476 KLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQ 535 + LK R +QKG QY+K+ + GE +EV E A VNLTDYLDTGLFLDHR R+ + Sbjct: 475 NIALKVRAQQKGSKQYEKINQSGEMMEVFENGARFLVNLTDYLDTGLFLDHRNTRQKVKA 534 Query: 536 MSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQ 595 +S+GKD LNLFSYTGS +V A +GGA+S TTVDMS TYL+WA++N+ LN L+G H IQ Sbjct: 535 LSQGKDVLNLFSYTGSVSVFAAMGGAKSVTTVDMSNTYLDWAKKNVALNKLSG-PHAFIQ 593 Query: 596 ADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFS 655 ADC WL ++DLIFIDPP+FSNSKRM++ +DVQRDH+ ++ D K L+ GTI+FS Sbjct: 594 ADCTTWLGTHKGKYDLIFIDPPSFSNSKRMQNTWDVQRDHVKMLTDAKACLKEQGTIIFS 653 Query: 656 NNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 NNKRGF++D + LGL+ + IT++T+ +DFAR +IH CW++ Sbjct: 654 NNKRGFKLDETAVTALGLQVENITKETIPEDFARKGKIHQCWVL 697 >UniRef50_A6V328 Ribosomal RNA large subunit methyltransferase L n=10 Tax=Gammaproteobacteria RepID=RLML_PSEA7 Length = 725 Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/720 (47%), Positives = 455/720 (63%), Gaps = 26/720 (3%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 LF + +GLE LL E + LG E + V +G + Y+ +WSRLA+R++L L Sbjct: 7 LFLTCPKGLESLLLEEAQGLGLSEARAQVSAVRGQGSLEVAYRLCLWSRLANRVLLVLAR 66 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 V + +YL V A+NW + + G T AV FSG I N+ +GA+KVKDAIVD + Sbjct: 67 FPVENAESMYLAVHAVNWEDHLDAGGTLAVEFSGKGSGIDNTHFGALKVKDAIVDNLRER 126 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 + RP+VD+ PD+RV++ L + A+++LDLSG LH RGYR + G AP+KE LAAA+++ Sbjct: 127 SGRRPSVDKVNPDVRVHLHLDRGQATLSLDLSGHSLHQRGYRLQQGAAPLKENLAAAVLI 186 Query: 184 RSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 R+GW G L DPMCG GT L+EAA++A D AP L R RWGFS W H A+W+++ Sbjct: 187 RAGWPKIAAEGGALADPMCGVGTFLVEAALMAADIAPNLRRERWGFSNWLGHVPALWRKL 246 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 EAQ RA GLA G ++D R+IQ AR N AG+ + + ++A Sbjct: 247 HEEAQQRAAAGLARAPLWIRGYEADPRLIQPARNNIERAGVADWVKIYQGELATFEPRPD 306 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 KG G V+ NPPYGERL E +L+ L+ LG ++ GW+ +F+ +P+L + +R+ Sbjct: 307 KGQAGLVICNPPYGERLGDEASLLYLYQNLGERLRQSCIGWSAGVFTGAPELGKRMGIRS 366 Query: 360 DKQYKAKNGPLDC------VQKNYHV----------AESTPDSKPAMVAED---YTNRLR 400 KQY NG L C V+ V ++ S+PA ++E + NRL+ Sbjct: 367 HKQYAFWNGALACKLLMIQVEPRQFVTGERGERNDDGQARAPSEPARLSEGGQMFANRLQ 426 Query: 401 KNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLF 460 KNL++ KWAR++ +ECYRLYDAD+PEY +AVD Y DWV VQEYA PK++D KA+ RLF Sbjct: 427 KNLRQLGKWARRDKVECYRLYDADMPEYALAVDIYGDWVHVQEYAAPKSVDPAKAQARLF 486 Query: 461 DIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDT 520 D +AA LG+A ++V+K RERQ GK QY++ +G+FLEV E L VNLTDYLDT Sbjct: 487 DALAAIPQALGVAQERVVVKRRERQAGKKQYERQSSEGKFLEVGEGGVRLLVNLTDYLDT 546 Query: 521 GLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERN 580 GLFLDHR R + + + GK FLNLF YT +ATVHA GGARSTT+VD+S+TYL+WA RN Sbjct: 547 GLFLDHRPMRLRIQKEAAGKRFLNLFCYTATATVHAARGGARSTTSVDLSKTYLDWARRN 606 Query: 581 LRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMK 640 L LNG + R RL+ +D + WLRE + Q++LIFIDPPTFSNSKRME FDVQRD + L+ Sbjct: 607 LSLNGFSDR-QRLVHSDVMEWLREDDGQYELIFIDPPTFSNSKRMEGVFDVQRDQVELLD 665 Query: 641 DLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLIT 700 L GG + FSNN R F +D A+ + +EIT +TL DFARN +IH W IT Sbjct: 666 LAMARLAPGGVLYFSNNFRKFELDESVQARYAV--EEITGETLDPDFARNPKIHRAWRIT 723 >UniRef50_A4XWP8 Ribosomal RNA large subunit methyltransferase L n=7 Tax=Proteobacteria RepID=RLML_PSEMY Length = 725 Score = 634 bits (1634), Expect = e-180, Method: Compositional matrix adjust. Identities = 333/718 (46%), Positives = 452/718 (62%), Gaps = 26/718 (3%) Query: 7 STARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKV 66 + +GLE LL E LG E + V + + + Y+ +WSRLA+R++L L + Sbjct: 10 TCPKGLEGLLLEEARALGLEEAREQTAAVRGQAELEVAYRLCLWSRLANRVLLVLSRFSM 69 Query: 67 YSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLP 126 + +LY GV+A++W + P + AV FSG I NS +GA+KVKDAIVD Sbjct: 70 NNAEELYEGVKAVDWRDHLEPAGSLAVEFSGHGSGIDNSHFGALKVKDAIVDRLRTAGGE 129 Query: 127 RPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSG 186 RP++D+ PD+RV++ L + A ++LDLSG LH RGYR + G AP+KE LAAA+++R+G Sbjct: 130 RPSIDKINPDLRVHLRLDRGEAVLSLDLSGHSLHQRGYRLQQGAAPLKENLAAAVLIRAG 189 Query: 187 W----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 W G L DPMCG GT LIEAA++A D AP L R RWGFS W H AIW+++ AE Sbjct: 190 WPRIAAEGGALADPMCGVGTFLIEAALMAADVAPNLKRERWGFSNWLGHVPAIWKKLHAE 249 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 A+ RA GLA G ++D R+IQ R N AG+ + + ++ + Sbjct: 250 AEQRAAAGLARPPLWIRGYEADPRLIQPGRNNVERAGLSDWVKIYQGELGSFEPRPDQNQ 309 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 G V+SNPPYGERL E +L+ L+ LG ++ GW ++F+ +P+L + LR+ KQ Sbjct: 310 KGLVISNPPYGERLGDEASLLYLYQNLGERLRQACLGWEAAVFTGAPELGKRMGLRSHKQ 369 Query: 363 YKAKNGPLDC------VQ-------------KNYHVAESTPDSKPAMVAEDYTNRLRKNL 403 Y NG L C VQ ++ VAE++ ++ + + + NRL+KNL Sbjct: 370 YSFWNGALACKLLLIKVQTEQFVTGERRTRTEDEPVAEASSQARLSEGGQMFANRLQKNL 429 Query: 404 KKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDII 463 K+ KWAR+EG+ECYRLYDAD+PEY +AVD Y DWV VQEYA P+++D KA+ RL D + Sbjct: 430 KQLGKWARREGVECYRLYDADMPEYALAVDLYRDWVHVQEYAAPRSVDPDKAQARLLDAL 489 Query: 464 AATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLF 523 AA LG+A +++ +K RERQ G QYQ+ +G+F+EV+E L VNLTDYLDTGLF Sbjct: 490 AAIPQALGVAQSRVAIKRRERQTGTKQYQRQAAQGQFMEVSEGGVKLLVNLTDYLDTGLF 549 Query: 524 LDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRL 583 LDHR R + + + GK FLNLF YT +ATVHA GGARSTT+VD+S+TYL+WA RNL L Sbjct: 550 LDHRPLRLRIQREAAGKRFLNLFCYTATATVHAAKGGARSTTSVDLSKTYLDWARRNLSL 609 Query: 584 NGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLK 643 NG + + HRL Q D +AWL E ++DLIFIDPPTFSNSKRME FDVQRDH+ L+ Sbjct: 610 NGFSDK-HRLEQGDVMAWLAEDRGEYDLIFIDPPTFSNSKRMEGVFDVQRDHVELLDLAM 668 Query: 644 RLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 L GG + FSNN R F++D +A+ + +EI+ +TL DFARN +IH W TA Sbjct: 669 ARLAGGGVLYFSNNFRKFQLDESLVAR--YQVEEISAQTLDPDFARNPKIHRAWRFTA 724 >UniRef50_Q1N650 Putative uncharacterized protein n=2 Tax=Oceanospirillaceae RepID=Q1N650_9GAMM Length = 738 Score = 622 bits (1604), Expect = e-176, Method: Compositional matrix adjust. Identities = 324/707 (45%), Positives = 444/707 (62%), Gaps = 30/707 (4%) Query: 22 NLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINW 81 +LGA E ++ V + D +L Y++ +WSRLASR++ P+ E + S LY +++INW Sbjct: 34 SLGASEVKLGVAFVACRADLQLAYKACIWSRLASRVLWPIAEGQGESAEALYDCIKSINW 93 Query: 82 TEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNV 141 E F+ +F +HF+G + IRN+ +GA+K KDAI D F RP+V D PDI ++V Sbjct: 94 IEHFSDRQSFKIHFTGKSPDIRNTHFGALKAKDAICDYFRELTGNRPDVS-DQPDIHIHV 152 Query: 142 WLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGW-----QPGTPLLDP 196 LHK ++D +G+ LH RGYR G AP+KE LAAAIVMRSGW Q LLDP Sbjct: 153 RLHKGVIKTSIDFAGEPLHKRGYRQSQGAAPLKENLAAAIVMRSGWPSMMKQTEAALLDP 212 Query: 197 MCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL-AEYS 255 MCGSGTLLIEAA++A + APGL R ++ W QH W+ VKA+AQ + + L E Sbjct: 213 MCGSGTLLIEAALIAANIAPGLLRSQYAVERWKQHQRDEWRVVKADAQEKKEQALQTETE 272 Query: 256 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGER 315 G D D RVIQ+A NA AG+ + F V+ +A G ++ NPPYGER Sbjct: 273 LTLLGYDMDERVIQKAIQNAIRAGVQHYVHFSVQALADWRREKGLPDEGLIVCNPPYGER 332 Query: 316 LDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQK 375 L E A+ AL++ +G K F GW +++F+ +P ++RADKQY+ NG + Sbjct: 333 LSDEVAIGALYAAMGNKAKQFFPGWKMAIFTGNPQQAYQFKMRADKQYQMFNGAIPSKLM 392 Query: 376 NY--------HVAESTP-------DSKPAMV---AEDYTNRLRKNLKKFEKWARQEGIEC 417 Y H EST DS + A+ NR++KNLKK ++A+++ C Sbjct: 393 VYGISKDSDKHFVESTEARSIESGDSANIKLNDGAQMVANRIKKNLKKIVRYAKKQKTNC 452 Query: 418 YRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKL 477 YR+YDAD+PEY VAVD Y DWV VQEYAPPK++D KA+ RL D++ A L + ++ Sbjct: 453 YRVYDADMPEYAVAVDVYGDWVHVQEYAPPKSVDPEKAQNRLRDVLDALPVALNVDRERI 512 Query: 478 VLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMS 537 LK R+ QKGK QYQK+ E+ F EV E + +VN+TDYLDTGLFLDHR R + ++ Sbjct: 513 ALKQRQVQKGKKQYQKVDEQASFFEVQEGSCRFYVNMTDYLDTGLFLDHRPIRTDIETLA 572 Query: 538 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQAD 597 KGKDFLNLFSYT +A+VHA +G ARSTT+VDMS+TYL W RNL LNG+ + H IQAD Sbjct: 573 KGKDFLNLFSYTCTASVHAAVGEARSTTSVDMSQTYLNWGRRNLTLNGIAEKYHHFIQAD 632 Query: 598 CLAWLREA---NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMF 654 C+ WL++ +++FDLIF+DPP+FSNSKRM DVQRDH+ L++ LL+ G ++F Sbjct: 633 CMQWLKDVQSESKRFDLIFMDPPSFSNSKRMIGVLDVQRDHVELIELAMGLLKPNGILIF 692 Query: 655 SNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 SNN + F++D D L K + +++ KT+ DF RN +IH C+ I+A Sbjct: 693 SNNLKRFKLDFDALNK--FEVIDVSAKTIPDDFTRNAKIHQCFQISA 737 >UniRef50_Q5QX63 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Idiomarina RepID=RLML_IDILO Length = 704 Score = 609 bits (1571), Expect = e-172, Method: Compositional matrix adjust. Identities = 307/709 (43%), Positives = 446/709 (62%), Gaps = 12/709 (1%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M F + ++GLE LL EL+ + G + + D + Y MWSRLASR++L Sbjct: 1 MYRFFIACSKGLEGLLFDELQEFNLSHVKQTLAGCYIEADLQQAYTVAMWSRLASRMLLQ 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 LGE +V S ++ L + +W+++F+ TF V FSG ND IR++Q+GA VKD IVD F Sbjct: 61 LGEKEVSSLDEIKLALTQFSWSKVFDANRTFVVDFSGGNDDIRHTQFGAQLVKDCIVDNF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RP++D+ PDIR+ V +HK+ + +LD +GDG+H RGYR + G AP++ETLAAA Sbjct: 121 RNSGFERPSIDKQDPDIRIAVRVHKDKLTWSLDFTGDGMHKRGYRLQQGEAPLRETLAAA 180 Query: 181 IVMRSG----WQPGTPLL-DPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAI 235 I++R+G + P++ DP CGSGTL+IEAAM+A D APGL R WGF W +H + Sbjct: 181 ILVRAGIKNELEKDEPVIFDPFCGSGTLVIEAAMMAMDHAPGLSRAHWGFLFWHEHSPQL 240 Query: 236 WQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLT 295 W +V +A+ R ++G + H GSD++ ++ +A+ NA+ + E+I FEV D Sbjct: 241 WHDVLEQAEQRFKEGKKNFKGHLKGSDNNPHLVAKAKDNAKRVLLHEVIEFEVADATNCE 300 Query: 296 NPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCL 355 P G ++ NPPYGERL + L+ GR +K+ F W++++ + LL L Sbjct: 301 AP---AESGLLVCNPPYGERLGEAVETLLLYRRFGRQLKDTFQNWHIAVLAGDEQLLKRL 357 Query: 356 QLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGI 415 +LR+ K+Y NG + Y + + PD + A+D NR++KN K KWA +EG+ Sbjct: 358 KLRSHKKYPLLNGAIPVNLALYDLTKEQPDFAESQ-ADDLVNRVKKNHAKLSKWANKEGL 416 Query: 416 ECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPN 475 +C+R+YDAD+PEYN A+D Y D+VVVQEYA PK I A RL+ ++ + S L ++ + Sbjct: 417 DCWRVYDADIPEYNAAIDIYQDYVVVQEYAAPKDIPEGVANDRLWFMLESLSSALPVSED 476 Query: 476 KLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQ 535 K++LK R+RQ GK QY++ + L V EY A VNLTDYLDTGLF+DHR+ R+ L Sbjct: 477 KIILKRRQRQSGKQQYERQSQDSTVLTVNEYGAKFEVNLTDYLDTGLFMDHRLVRKELLD 536 Query: 536 MSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQ 595 + D LNLF+YT +A+V A GA +VDMS+TYL+W ERN LN L G ++ IQ Sbjct: 537 KCEELDVLNLFAYTCTASVQAARAGAARVVSVDMSKTYLKWGERNFALNRLRG-DYQFIQ 595 Query: 596 ADCLAWLRE--ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIM 653 ADC W+RE + FD+IF+DPPTFSNSKRM D+QRDH+ L+K +L+ G I+ Sbjct: 596 ADCFIWMREQRGKQLFDVIFLDPPTFSNSKRMSGTLDIQRDHVGLIKTATGMLKEDGVIL 655 Query: 654 FSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITAA 702 FSNN++ FR+D +GL K GL+ + TQ ++ +DF R++ IH+ ++I+ A Sbjct: 656 FSNNRKKFRIDTEGLDKAGLEVNDQTQASIPEDFKRHKGIHHYYIISRA 704 >UniRef50_A6VW36 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Marinomonas RepID=RLML_MARMS Length = 721 Score = 608 bits (1567), Expect = e-172, Method: Compositional matrix adjust. Identities = 298/700 (42%), Positives = 441/700 (63%), Gaps = 16/700 (2%) Query: 11 GLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDL 70 GLE +L+ EL G + ++ + V D +Y++ +WSR+A+R+MLP+ K+ S Sbjct: 24 GLENVLEKELHGEGLTQTRLGEAQVKLTTDLEGMYKACLWSRVATRVMLPIANFKMESAD 83 Query: 71 DLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNV 130 DLY GV+AI W++ N T A+ G N IRN+Q+GA++ KDAI D F + RP+V Sbjct: 84 DLYDGVKAIQWSDHMNASNTIAIDCHGTNHHIRNTQFGAVRAKDAIADYFVALSGERPSV 143 Query: 131 DRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPG 190 +++ P++R+ + + +E ++++DLSG+ +H RGYR + G+AP+KE LAA +++R+GW Sbjct: 144 EKEQPEVRIALRIKREVVTVSIDLSGESMHRRGYRQQGGMAPLKENLAAGLLLRAGWGTD 203 Query: 191 ---TPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRA 247 T L+DPMCGSGT L+EAAM++ D APGL R WGF GW QHD +WQ++ A+ R Sbjct: 204 CGLTQLIDPMCGSGTFLVEAAMMSLDMAPGLRRPYWGFKGWKQHDHRMWQQLMDFAKNR- 262 Query: 248 RKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVL 307 +K A F G+D + + I AR N + AG+ ++I + + + G ++ Sbjct: 263 KKDPATLGIRFQGTDREQKAIAAARENIKRAGLTDVIDVTMSSFQEHEFDINPDAPGLLI 322 Query: 308 SNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKN 367 +NPPYGER+ E ALIAL+ LG + GW + +++ L + +R +K + N Sbjct: 323 TNPPYGERIGDEMALIALYRQLGEWVVTHVRGWQFMMLTSNDHLARQIPVRPEKSTRVIN 382 Query: 368 GPLDCVQKNYHVAESTPDSKPAMVAED--------YTNRLRKNLKKFEKWARQEGIECYR 419 G ++C + Y K +VA+ + NRL+KN KK +KW + I+CYR Sbjct: 383 GGIEC--RAYQFPLLAGSIKEDVVAQSVMTPGAQMFANRLQKNAKKLKKWVEKNKIQCYR 440 Query: 420 LYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVL 479 +YDAD+PEY+VA+D Y +W VQEY PK+ID KA+QRLF++++A + L I+ + ++L Sbjct: 441 VYDADMPEYSVAIDIYGNWAHVQEYQAPKSIDPEKAKQRLFEVMSAIPTALNISESNVIL 500 Query: 480 KTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKG 539 K R+RQ GK QY+K + + V EY VNL DYLDTGLFLDHR R+++ + G Sbjct: 501 KQRQRQTGKEQYEKFDQTKHEMIVEEYGCEFIVNLKDYLDTGLFLDHRPVRKLIQDKANG 560 Query: 540 KDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCL 599 FLNLF YT +A+VHAG GGARS+ +VDMS TY EWA RN+ LN + R H++ +ADC+ Sbjct: 561 VRFLNLFCYTATASVHAGQGGARSSLSVDMSNTYTEWARRNIELNEFSDRYHQVERADCI 620 Query: 600 AWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 659 WL+++ ++FDLIF+DPPTFSNSK+M D D+QRDH L++ L GG ++FSNN R Sbjct: 621 EWLKQSRDKFDLIFMDPPTFSNSKKMADILDIQRDHGELVRLAMARLARGGELIFSNNYR 680 Query: 660 GFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 R LD + + IT++TL DF RN +IH C++I Sbjct: 681 --RFVLDEALEQEYDVKNITRETLDPDFDRNDKIHQCYII 718 >UniRef50_Q60AX5 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Gammaproteobacteria RepID=RLML_METCA Length = 738 Score = 602 bits (1552), Expect = e-170, Method: Compositional matrix adjust. Identities = 336/733 (45%), Positives = 431/733 (58%), Gaps = 41/733 (5%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 FA+ +GLE LL EL+ LGA + + GV F+G Y+ +WSRLA+RI++ L Sbjct: 7 FFATAPKGLEPLLVRELDGLGAESIKETRAGVEFRGTLETAYRVCLWSRLANRILMSLDR 66 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 + LY GVQ +W F PGAT AV FS I ++ +GA KVKDAI D F Sbjct: 67 FAAATPEALYDGVQRTDWGRHFGPGATLAVDFSSRRSAITHTLFGAQKVKDAIADQFLEH 126 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 RP+V + PDIR+NV L + A I LDLSGD LH RGYR AG AP+KE LAAA+++ Sbjct: 127 CGRRPSVRLERPDIRINVHLDADQAVIGLDLSGDSLHRRGYRTEAGPAPLKENLAAAVLI 186 Query: 184 RSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 R+GW G L+DPMCGS TLLIE A+LA D APG R +GF W HD +W+++ Sbjct: 187 RAGWPDIAARGGSLIDPMCGSATLLIEGALLAADIAPGSFREYFGFLAWKGHDLELWRKL 246 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 EA+ RA GLA G D D R I A N AG+ I E K A + P Sbjct: 247 LTEARERAEAGLARLPP-ILGYDLDRRAIHLALDNIDRAGLRGRIHVERKVAADVR---P 302 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 KG G V+ NPPYGERL +LI ++ G ++ F GWN +L + + +L + +RA Sbjct: 303 KGRPGLVVVNPPYGERLGDVESLIPVYREFGETLQRHFRGWNAALLTGNFELAFQIGIRA 362 Query: 360 DKQYKAKNGPLDCVQKNYHVAES---TPDSK----------------------PAMVAED 394 + + NG L+C + +A TP S PA +E Sbjct: 363 GRYHTLYNGALECRLFLFDIAPERFFTPRSGVPETEGQKKLRQIVEKARRGAIPAEQSEM 422 Query: 395 YTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD---WVVVQEYAPPKTID 451 + NRLRKNL+ WAR+ G+ CYRLYDADLPE+ VAVD Y WV VQEY P ++D Sbjct: 423 FANRLRKNLRNLGTWARRNGVSCYRLYDADLPEFAVAVDIYQGEKLWVHVQEYEAPASVD 482 Query: 452 AHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLW 511 KA+ RL +A VL + ++ LK R RQKG QY K G+ F V E W Sbjct: 483 PAKAQSRLAGAVAMIPEVLEVPREQIFLKVRRRQKGDAQYVKQGQTAHFHVVEEGGWRFW 542 Query: 512 VNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSR 571 VN DYLDTGLFLDHRI R ++ Q+++ + FLNLF+YTG+ATV+A GGA STTTVDMS Sbjct: 543 VNFEDYLDTGLFLDHRITRGLIQQVARDRHFLNLFAYTGTATVYAAGGGAASTTTVDMSH 602 Query: 572 TYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA---NEQFDLIFIDPPTFSNSKRMEDA 628 TYL+WA RNL LNG R H IQADCL WL +A ++ LIF+DPPTFSNSKRM + Sbjct: 603 TYLDWAGRNLALNGFGERDHLRIQADCLDWLEQAVDRRRRYGLIFLDPPTFSNSKRMTGS 662 Query: 629 FDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFA 688 FD+QRD L+K + LL GG ++FS N+R FR+D LA G +++++ TL +DF Sbjct: 663 FDIQRDQGPLLKKVVSLLEPGGMLIFSTNRRRFRLDETALA--GCAVEDVSRVTLPKDFE 720 Query: 689 RNRQIHNCWLITA 701 RN +IH CW I A Sbjct: 721 RNPRIHACWRILA 733 >UniRef50_C0N217 Putative RNA methylase family UPF0020 n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N217_9GAMM Length = 734 Score = 596 bits (1537), Expect = e-169, Method: Compositional matrix adjust. Identities = 316/729 (43%), Positives = 434/729 (59%), Gaps = 38/729 (5%) Query: 7 STARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKV 66 + ARG+ LL EL+ LG + G + F G+ Y+ +WSR+A R+++P+ Sbjct: 10 TAARGMLPLLADELKQLGIKNSKQEAGNIRFTGELEDAYKVCLWSRVAIRVLMPIAHLNA 69 Query: 67 YSDLDLYLGVQAINWTEMFNP-GATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNL 125 + LY GV+A+ W E N +T AV F+ I++SQYGA KVKDAIVD F + Sbjct: 70 ETPEQLYDGVKALAWEEHINAEDSTLAVDFNSFRSKIKHSQYGAQKVKDAIVDRFREQTG 129 Query: 126 PRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRS 185 RP+VD PD+R+NV++ A +++DLSG+ LH RGYR AP+KE LAAAI++++ Sbjct: 130 LRPSVDLFQPDLRINVYVKHNQAIVSIDLSGESLHKRGYRTHNTAAPLKENLAAAILLKA 189 Query: 186 GW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 W + G L+DPMCGSGT LIEAAM+A D APG+ R +GFS W QHD W+ +KA Sbjct: 190 EWPRLAKQGWALVDPMCGSGTFLIEAAMIAADIAPGIARDYFGFSFWKQHDRECWKRLKA 249 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVK---DVAQLTNPL 298 +A+ R + GLA G D+D++ + AR N AG+ E I + D ++ L Sbjct: 250 DAERRRQAGLARLPV-MLGGDNDSKAVLAARENIAEAGLAERIQVHERSLLDWPSVSRDL 308 Query: 299 PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 P G ++ NPPYGER+ L L+ LG ++ GW +L + + L L Sbjct: 309 PN--VGLMVCNPPYGERIGQRDELHHLYESLGNVIHEFLPGWRTALITDNAQLGKFTGLT 366 Query: 359 ADKQYKAKNGPLDCVQKNYHV-------------------AESTPDSKPAMVAED---YT 396 NGP+ C Y +E+ D+ + E + Sbjct: 367 MFDTVPFDNGPIPCDVLFYRAPKPVRSTEMLHASSLTDEDSEAVADATKVTITEQGRMFA 426 Query: 397 NRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKAR 456 NRL KN+K KWAR+ + CYR+YDADLP+Y A+D Y ++V VQEYAPPK ID KA Sbjct: 427 NRLMKNIKHLAKWARKNELSCYRVYDADLPDYAFAIDLYGEYVHVQEYAPPKQIDPQKAV 486 Query: 457 QRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTD 516 +RL + + VL + N++VLK R++Q+G QY+ + EV E WVNLTD Sbjct: 487 ERLKEAMQLIPEVLDLPSNQVVLKVRQKQRGTQQYEVQSSHNQRFEVAENGLKFWVNLTD 546 Query: 517 YLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEW 576 YLDTGLFLDHR R++L Q + GKDFLNLFSYTGSATV+A G A+STT+VDMS TYL W Sbjct: 547 YLDTGLFLDHRDTRQLLLQKAAGKDFLNLFSYTGSATVYAAAGQAKSTTSVDMSNTYLAW 606 Query: 577 AERNLRLNGLTGRAHRLIQADCLAWLREANEQ---FDLIFIDPPTFSNSKRMEDAFDVQR 633 A+ N+RLN L G H ++A+CL WL+ A ++ F LIF+DPPTFSNS RME FD+QR Sbjct: 607 AQDNMRLNQLNGEQHHFVRANCLEWLQAAQQEQQRFGLIFLDPPTFSNSSRMEGVFDIQR 666 Query: 634 DHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQI 693 DH++L+K LL G ++FS N+R F++ +D L+ L + +ITQ TL +DF RN +I Sbjct: 667 DHVSLLKMTSHLLTDDGCLIFSTNRRDFKLAVDELSDLDIS--DITQSTLPKDFERNNKI 724 Query: 694 HNCWLITAA 702 H CW+I A Sbjct: 725 HYCWMIRRA 733 >UniRef50_Q3KFC5 Ribosomal RNA large subunit methyltransferase L n=23 Tax=Bacteria RepID=RLML_PSEPF Length = 756 Score = 596 bits (1537), Expect = e-169, Method: Compositional matrix adjust. Identities = 329/752 (43%), Positives = 437/752 (58%), Gaps = 57/752 (7%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 LF + +GLE LL E LG E + V Y+ +WSRLA+R++L L Sbjct: 7 LFLTCPKGLEGLLIEEAVGLGLEEAREHTSAVRGMATMETAYRLCLWSRLANRVLLVLKR 66 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 + + DLY GV ++W + T AV FSG I N+ +GA+KVKDAIVD Sbjct: 67 FPMKNAEDLYHGVLDVDWQDHMLADGTLAVEFSGHGSGIDNTHFGALKVKDAIVDKLRTP 126 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 RP++D+ PD+R+++ L + A ++LDLSG LH RGYR + G AP+KE LAAAI++ Sbjct: 127 QGDRPSIDKLNPDLRIHLRLDRGEAILSLDLSGHSLHQRGYRLQQGAAPLKENLAAAILI 186 Query: 184 RSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 RSGW G L DPMCG GT L+EA M+A D AP L R +WGF+ W H A+W+++ Sbjct: 187 RSGWPRIAAEGGALADPMCGVGTFLVEAGMIAADMAPNLRREQWGFTAWLGHVPALWKKL 246 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 EA RA GLA+ G ++D R+IQ R N AG+ E I +VA Sbjct: 247 HEEAVERAAAGLAKPPLWIRGYEADPRLIQPGRNNVERAGLSEWIKIYQGEVATFEPRPD 306 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 + G V+ NPPYGERL E +L+ L+ LG ++ W ++F+ +PDL + +R+ Sbjct: 307 QNQKGLVICNPPYGERLGDEASLLYLYQNLGERLRQACLNWEAAVFTGAPDLGKRMGIRS 366 Query: 360 DKQYKAKNGPLDC-------------------------------------------VQKN 376 KQY NG L C KN Sbjct: 367 HKQYSFWNGALPCKLLLIKVLPDQFVTGERRTPEQRQAEREQAAYDQTPNEPQERKFNKN 426 Query: 377 YHVAESTPDSKPAMV-------AEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYN 429 + + TP P + + + NRL+KNLK KW ++EGI+CYR+YDAD+PEY Sbjct: 427 GNPIKPTPAPAPVIEQPRLSEGGQMFANRLQKNLKAMSKWVKREGIDCYRVYDADMPEYA 486 Query: 430 VAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKN 489 +A+D Y DWV VQEYA PK+ID KA R+FD +AA L I +++V+K RERQ G Sbjct: 487 MAIDLYHDWVHVQEYAAPKSIDPEKASIRMFDALAAIPQALNIDKSRVVVKRRERQSGTK 546 Query: 490 QYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYT 549 QY++ +G+F EVTE L VNLTDYLDTGLFLDHR R + + + GK FLNLF YT Sbjct: 547 QYERQAAQGKFNEVTEGGVKLLVNLTDYLDTGLFLDHRPMRMRIQKEAAGKRFLNLFCYT 606 Query: 550 GSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQF 609 +A+VHA GGARSTT+VD+S+TYL+WA RNL LNG + + +RL Q D +AWL E++ Sbjct: 607 ATASVHAAKGGARSTTSVDLSKTYLDWARRNLSLNGFSDK-NRLEQGDVMAWLENCREEY 665 Query: 610 DLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLA 669 DLIFIDPPTFSNSKRME FDVQRD + L+ L +GG + FSNN R F+++ D LA Sbjct: 666 DLIFIDPPTFSNSKRMEGIFDVQRDQVQLIDLAMARLASGGVLYFSNNFRKFQLE-DNLA 724 Query: 670 KLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 + +EIT T+ DFARN +IH W ITA Sbjct: 725 ER-YAVEEITASTIDPDFARNGKIHRAWKITA 755 >UniRef50_Q3IGZ3 Ribosomal RNA large subunit methyltransferase L n=3 Tax=Alteromonadales RepID=RLML_PSEHT Length = 705 Score = 594 bits (1532), Expect = e-168, Method: Compositional matrix adjust. Identities = 321/707 (45%), Positives = 436/707 (61%), Gaps = 16/707 (2%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 A T+ G+E LL EL LGA + G V F+ D+ L + + +R A+R+++ + E Sbjct: 3 FIALTSIGIENLLVDELTELGATVSKQTVGSVRFEADSLLAQKVCLSTRFATRVLMLIEE 62 Query: 64 CKVYSDLD-LYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + D + LY ++ W E F P TFAV F+G ND+++N+Q+ + +KDAIVD F Sbjct: 63 KEGVDDKNSLYNFARSQPWQEWFGPTQTFAVDFNGTNDSLKNTQFSGLVIKDAIVDYFND 122 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 RPNVD+ ++RV L++ S+ +D SG L RGYR G APIKE LAAA++ Sbjct: 123 LFEQRPNVDKQDANVRVVARLNRYGVSMYIDYSGPRLSERGYRQGQGKAPIKEHLAAALI 182 Query: 183 MRSGW--QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 RSGW PL DP CG+GT+LIEAA +A + APGL R + F A ++E+K Sbjct: 183 KRSGWLENVNQPLFDPCCGAGTILIEAAGMARNEAPGLFREGFAFERLPSFRAAKFKELK 242 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 E + + G D DA+V+ +A NA+ A + ++I F+ D +LT + K Sbjct: 243 EELLG----NIIDPKLWLIGHDYDAQVLGKAIDNAKRAELDDIIKFKQSDATKLT-AVAK 297 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 P G V+SN PYGER+ S L+ LH LG K F W L+L L L+L Sbjct: 298 LP-GVVISNLPYGERIGSMAELVDLHRNLGVGFKKHFNHWKLALLGMDESLFKLLKLVRL 356 Query: 361 KQYKAKNGPLDCVQKNYHVAES----TPDSKPAMVAE---DYTNRLRKNLKKFEKWARQE 413 K+YK KNGPLD Y + + T D K A+ E + NRL+KN + + W +Q Sbjct: 357 KRYKFKNGPLDVELNLYQLDDKQVSLTTDDKKALNFEGSMSFANRLKKNKQGLKNWLKQN 416 Query: 414 GIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIA 473 I YR+Y+AD+PEYNVAVD Y D V+ EYA PK ID + +RL D+I+ T L IA Sbjct: 417 EITAYRVYEADIPEYNVAVDIYGDSAVIFEYAAPKEIDEKTSEKRLQDVISLTAEQLKIA 476 Query: 474 PNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRML 533 P + +K R++QKG+ QY + ++ + V E+ A VNL DYLDTGLFLDHR+ RR + Sbjct: 477 PENIAVKVRKKQKGEEQYTPMAKQNRTMVVEEFGAKFKVNLFDYLDTGLFLDHRLMRRYI 536 Query: 534 GQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRL 593 + +K K FLNLF+YTG+A+VHA LGGA++ TTVD+S+TYL+W + N LN ++ +R Sbjct: 537 QENAKDKRFLNLFAYTGTASVHAALGGAKAITTVDLSKTYLKWGQDNFDLNNISNTRYRF 596 Query: 594 IQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIM 653 QADCL WL A Q+DLIF+DPPTFSNSKRM+DAFDVQ DH+ L+ +K++L GT++ Sbjct: 597 EQADCLKWLEHATAQYDLIFLDPPTFSNSKRMKDAFDVQSDHIKLLTWVKKILSPSGTLI 656 Query: 654 FSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLIT 700 FSNNKRGF MD GL LGLKA I+ KTLS DF RN++IHN WLIT Sbjct: 657 FSNNKRGFVMDEVGLIGLGLKAVNISDKTLSPDFKRNKKIHNSWLIT 703 >UniRef50_Q5X0J6 Ribosomal RNA large subunit methyltransferase L n=6 Tax=Legionella RepID=RLML_LEGPL Length = 707 Score = 589 bits (1518), Expect = e-166, Method: Compositional matrix adjust. Identities = 308/709 (43%), Positives = 430/709 (60%), Gaps = 23/709 (3%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 SLF S A+GLE LL+ EL+ LG QV GV+ + ++Y +WSRLA+RI L L Sbjct: 4 SLFISCAKGLEYLLEDELKGLGLHVTQVSPQGVYGEASLPVIYNLCLWSRLANRIQLILF 63 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + ++ +W +F T A+ F G ++ IRN+ +GA VKD IVD F R Sbjct: 64 SGHAAKEQAVHQLCTDFHWQTVFTHDKTIAIEFHGASEQIRNTMFGAQIVKDGIVDHFRR 123 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 N RP+VD++ P I ++ L + +++ DL G LH RGYR +AG AP+KE +AAA++ Sbjct: 124 LNGSRPSVDKEKPQILIHAHLKNDILTVSFDLVGYSLHQRGYRKKAGKAPLKENVAAAML 183 Query: 183 MRSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 +R+ W G L DP CGSGTL+IEAAM+A APGL R WA+H ++W++ Sbjct: 184 LRAKWPELAAQGYGLHDPFCGSGTLVIEAAMMAAHIAPGLLRQDQSLQYWARHQSSLWEK 243 Query: 239 VKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 ++ T+A + + + G+D+D++V+ AR+NA AG+ L+ F + L Sbjct: 244 LR----TQALQQVKPLAVKLVGTDTDSKVVALARSNAERAGVLPLVEF---NTLSLNACR 296 Query: 299 PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 P G V+ NPPYGERL L+ L+ LG + + GW ++ ++SP L L LR Sbjct: 297 PGTKRGLVVCNPPYGERLGEVTQLVPLYQQLGTTLHTCYQGWQAAILTSSPVLAKALGLR 356 Query: 359 ADKQYKAKNGPLDCVQKNYHVA-------ESTPDSKPAMVAEDYTNRLRKNLKKFEKWAR 411 ADKQY NGPL+C K Y + ++TP++ + A+ NRL KN +KWAR Sbjct: 357 ADKQYTLYNGPLEC--KLYCLTLSAANKLKNTPNAPLSDNAQMLFNRLEKNRNHLQKWAR 414 Query: 412 QEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLG 471 + I CYR+YDADLPEY A+D Y D+ V+QEYAPP +I HKA +R +++ LG Sbjct: 415 KNQITCYRIYDADLPEYAYAIDIYNDYAVLQEYAPPASIPVHKAEKRSLEMLQVVPRALG 474 Query: 472 IAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARR 531 I P KL++K R++QKG QYQK+G+ + VTE A L VNL DYLDTGLFLDHR+ R Sbjct: 475 IHPEKLIVKQRKQQKGSEQYQKIGKTSQRQIVTEGKAKLIVNLYDYLDTGLFLDHRLMRL 534 Query: 532 MLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAH 591 Q+ +G FLN F YT SA+VHA L GA TT VD+S+TYL WAE N RLN + H Sbjct: 535 KFAQLEQGTRFLNCFCYTASASVHAALAGAL-TTNVDLSKTYLLWAEDNFRLNDINLSKH 593 Query: 592 RLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGT 651 + +Q DC W++ ++FD+IF+DPP+FSNSKRM D D+QRDH++L+ RLL G Sbjct: 594 QFLQYDCKEWMKTTRDKFDVIFLDPPSFSNSKRMSDILDIQRDHVSLINMAMRLLNPDGV 653 Query: 652 IMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLIT 700 + FS N R F+ L+ + K Q+IT +T+ QDF RN +IH+C+ I Sbjct: 654 LYFSTNLRQFK--LEPMLKEKYAVQDITPQTIDQDFKRNSKIHHCFKIV 700 >UniRef50_UPI0000E10BA2 23S rRNA m(2)G2445 methyltransferase n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E10BA2 Length = 722 Score = 587 bits (1512), Expect = e-166, Method: Compositional matrix adjust. Identities = 304/721 (42%), Positives = 449/721 (62%), Gaps = 23/721 (3%) Query: 1 MNSLFASTARGLEELLKTELENLG-AVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIML 59 M+ + +T+RGL+ LL+ E++ L V ++ G V G+ Y+ + SRLA+R++ Sbjct: 1 MHQILVTTSRGLDALLQDEIQQLCPGVSTKLAPGMVKVSGELSDAYRICLHSRLANRVLW 60 Query: 60 PLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDA 119 L ++ LY I+W F+ F V F+G +I N+Q+GA+++KDAIVD Sbjct: 61 VLVHAPCANEQALYSAANNIDWPSHFSHEDDFMVQFNGTTKSINNTQFGALRIKDAIVDR 120 Query: 120 FTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAA 179 F L RPNV + AP V+ LH++ +I +DLSG LH R YR G AP+KE +A+ Sbjct: 121 FVEDGLMRPNVSKLAPKFVVHARLHRDEVTICIDLSGKSLHQRHYRQTTGDAPLKEHVAS 180 Query: 180 AIVMRSGWQ-----------PGTPLL-DPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSG 227 A++ RSG+ P + +L DPMCGSGT+ IEAA++A + AP + R +WGF+ Sbjct: 181 AMLYRSGFVERVKQNQASDVPQSLVLADPMCGSGTIAIEAALIAQNIAPAIAREQWGFNH 240 Query: 228 WAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGI-GELITF 286 W H WQ+++ +A +A+ ++ Y +D D ++++ A+ NA AG+ G++I Sbjct: 241 WKHHSAQQWQQIR-DAALQAQTPASDTHVAIYANDLDRKLVRSAKANADEAGVFGDIIFS 299 Query: 287 EVKDVAQLTNPLPKGPYGT------VLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGW 340 + + + P+ T +++NPPYGERL L+ + G +K F W Sbjct: 300 QTDALKWSVDTQPQQAIETGELTHFIVTNPPYGERLGELATLLPMFVKWGEQLKAHFANW 359 Query: 341 NLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAE-DYTNRL 399 ++S+ +++ +LL L+LR++K+Y NG L+C NY + ES + + D+ NRL Sbjct: 360 HVSMLTSNRELLRQLRLRSNKEYAMMNGKLECKCVNYQLNESNCTAVEQHSGQQDFANRL 419 Query: 400 RKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRL 459 +KNLK+ + + + +CYR+YDADLPEYN A+DRYADW+VVQEYAPPK I A KAR+RL Sbjct: 420 KKNLKRLKGFIQSNVTDCYRIYDADLPEYNCAIDRYADWLVVQEYAPPKDIPAEKARRRL 479 Query: 460 FDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLD 519 D++ + G++ +K+VLK RE+QKGK QY K + E + V E+ A +VNL DYLD Sbjct: 480 HDVLLQLPMLTGVSTDKIVLKVREQQKGKAQYDKFNSQHERIIVQEHGAQFYVNLHDYLD 539 Query: 520 TGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAER 579 TGLFLDHRI R+ Q +G LNLFSYTGS +VHA LG A S TTVDMS TYL+WA+ Sbjct: 540 TGLFLDHRITRQRFAQDVQGMRVLNLFSYTGSVSVHAALGKAASVTTVDMSNTYLDWAKD 599 Query: 580 NLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALM 639 N RLN L G + Q DCL+W++ ++Q++ IFIDPP+FSNSKRM +DVQRDH++L+ Sbjct: 600 NFRLNQLRG-GYDFQQGDCLSWIKHHSKQYERIFIDPPSFSNSKRMSKTWDVQRDHVSLI 658 Query: 640 KDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 +D L GG I FSNN R F++D + L +G ++IT T+ +D+ RN +IH+CW++ Sbjct: 659 RDALGCLTRGGKIYFSNNLRSFKLDTEALQDMGFAVEDITAATIPEDYIRNPKIHHCWIL 718 Query: 700 T 700 T Sbjct: 719 T 719 >UniRef50_Q1QXV9 Ribosomal RNA large subunit methyltransferase L n=6 Tax=Proteobacteria RepID=RLML_CHRSD Length = 732 Score = 586 bits (1511), Expect = e-166, Method: Compositional matrix adjust. Identities = 330/724 (45%), Positives = 434/724 (59%), Gaps = 31/724 (4%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL- 61 +L+ + RGLE LL EL + GA GVH + DT + Y+ +WSRLA+R++L L Sbjct: 10 TLYIACPRGLEGLLADELADFGAEVTGTTVAGVHAQADTAMAYRICLWSRLANRVVLCLL 69 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 E + L + ++W G++ AV F G ++ IR++++GA VKD IVDA Sbjct: 70 REQGIERPEALVEAARRVDWGAHLRAGSSLAVDFHGQSEHIRHTRFGAQSVKDGIVDAMR 129 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 RP VD PD R+ LH+ + LDL G LH RGYR AG AP+KE LAAA+ Sbjct: 130 AAGRERPAVDLKTPDARIYAHLHRGRLLLGLDLVGGSLHQRGYRRDAGHAPLKENLAAAL 189 Query: 182 VMRSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 +MR+ W + G PL+DP+CG+GTLLIEAA++A D AP L R + F W HD W+ Sbjct: 190 LMRADWPARARRGEPLVDPLCGAGTLLIEAALMAADIAPQLSRDYFAFEAWVGHDPDAWR 249 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 E++ EAQ RA G S YG D I A+ NA AGI LI + +VAQLT P Sbjct: 250 ELQREAQARANVGRRRVKSKLYGRDQSPPAIAAAKANAMRAGIPALIDLQGAEVAQLTRP 309 Query: 298 LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 G V++NPPYGERL P ++ +++ LG ++ +F GW L+LF+ +PDL L Sbjct: 310 EGVDGPGLVITNPPYGERLGELPEVVPIYTALGERLRAEFEGWQLALFTGNPDLGHRTGL 369 Query: 358 RADKQYKAKNGPLDC--------VQKNYHVAESTPD---------SKPAMV---AEDYTN 397 RA+KQY KNGPLDC Q+ S D S+P A+ + N Sbjct: 370 RAEKQYAFKNGPLDCKLLLIPVVAQRTERETSSEGDEPQGASGATSRPGPRNDGAQMFAN 429 Query: 398 RLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQ 457 RL KN K+ +KW +Q G CYRLYDAD+PEY +AVD Y D V VQEYAPP+++D +A++ Sbjct: 430 RLEKNRKRLKKWLKQSGERCYRLYDADMPEYALAVDVYGDRVHVQEYAPPRSVDPRQAQR 489 Query: 458 RLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDY 517 RL D + VLG+ P + K R RQ GK QY K GE EV+E A LWVNL DY Sbjct: 490 RLLDALEVIPQVLGVRPESVHYKQRTRQAGKAQYAKQDASGERFEVSEGPARLWVNLRDY 549 Query: 518 LDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWA 577 LDTGLFLDHR RR L +M+ GK FLNLF YTG+ATV A LGGA + +VD+S TYL WA Sbjct: 550 LDTGLFLDHRPVRRRLREMADGKRFLNLFCYTGTATVQAALGGASDSVSVDLSNTYLAWA 609 Query: 578 ERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLA 637 N LN L HR+++ DCL WL A +FDLIF+DPPTFSNSK+M+ DVQRDH Sbjct: 610 RDNFALNRLDPSRHRVVRDDCLRWLETAGSEFDLIFMDPPTFSNSKKMDAVLDVQRDHAR 669 Query: 638 LMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLG--LKAQEITQKTLSQDFARNRQIHN 695 L++ L GGT++FSNN+R F +D A +G ++I+ +T DF+R +H+ Sbjct: 670 LIELAMARLAPGGTLVFSNNQRRFVLD----AAVGERFAVEDISARTFDPDFSRRPDLHH 725 Query: 696 CWLI 699 C+LI Sbjct: 726 CFLI 729 >UniRef50_Q6AQA5 Ribosomal RNA large subunit methyltransferase L n=1 Tax=Desulfotalea psychrophila RepID=RLML_DESPS Length = 722 Score = 584 bits (1506), Expect = e-165, Method: Compositional matrix adjust. Identities = 302/708 (42%), Positives = 432/708 (61%), Gaps = 18/708 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 + A+ A GLEEL++ E++ VE ++ +G V ++G Y++ +WSR +SRI+L L Sbjct: 15 TFLANCALGLEELIEAEIKGFSGVEVELGKGTVQWQGSLETGYRACLWSRFSSRILLKLS 74 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLND-TIRNSQYGAMKVKDAIVDAFT 121 + +V S+ DLY +W + + TFA+ + D T+ +SQ+ A+++KD IVD F Sbjct: 75 QFEVNSEDDLYQNSFTYDWHQHMSWKTTFAIDCTLSADATVGHSQFAALRIKDGIVDRFK 134 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 RP+V PD+R ++ + ++ LDLSG+ LH RGYR G+AP+KE LAA I Sbjct: 135 EDGDERPSVKTTQPDVRFHIHVSGNEGTLYLDLSGESLHKRGYRVAGGMAPLKENLAAGI 194 Query: 182 VMRSGW---QPGTP-LLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 V SGW Q P L+DPMCG+GTLLIEAAM+ D APGL R +GF W QHD +WQ Sbjct: 195 VALSGWPEKQEALPSLIDPMCGTGTLLIEAAMMFGDVAPGLARNYFGFLHWHQHDSQLWQ 254 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 + EA R GL + F G D+D V+ AR N AG+ E I + + L P Sbjct: 255 ALLDEAVAREDAGLDKTWPSFQGYDADPVVVSSARKNIIRAGLDEFIQVKCSPLVHLGAP 314 Query: 298 LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 +G ++ NPPYGERL + L++ GRI + F GW++++F ++PDL ++ Sbjct: 315 TDRG---MLICNPPYGERLSETEKVRQLYAAFGRIGRKHFAGWDVAVFISNPDLAESFRV 371 Query: 358 RADKQYKAKNGPLDCVQKNYHVAESTPDS-----KPAMVAED---YTNRLRKNLKKFEKW 409 +K+Y+ NG + C AE +S + V ED + NR +KNLKK+ KW Sbjct: 372 SWEKKYRLFNGTIACRLSTGVFAEEEENSFAWEIQQVEVQEDALQFANRFKKNLKKYLKW 431 Query: 410 ARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISV 469 A++E I C+R+YD DL E+N++VD Y W+ VQEY PPKTID A +R + A + Sbjct: 432 AKKENISCFRVYDRDLQEFNLSVDLYEKWIHVQEYLPPKTIDPDLASRRFNIALRAIREI 491 Query: 470 LGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIA 529 LG+ +++ +K R+RQKG QYQ+ G++ + +V E N + VN DYLDTGLFLDHR Sbjct: 492 LGLRSDRVFIKKRQRQKGAGQYQQQGDRKKMHQVREGNCYFLVNFRDYLDTGLFLDHRPI 551 Query: 530 RRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGR 589 R +G+ S GK FLNL+ YTG+A+VHA GGA STTTVD+S TYL+W E N LNG Sbjct: 552 RLRIGRESLGKKFLNLYGYTGTASVHAAQGGAASTTTVDLSSTYLQWTEMNFSLNGFAEN 611 Query: 590 AHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAG 649 HR ++ADC+ WL E E +D IF+DPPTFSN+++ FD+QRDH+ L+ R L G Sbjct: 612 NHRTVKADCIKWLAEETELYDTIFVDPPTFSNTQKANRVFDIQRDHIQLLTLAMRRLSPG 671 Query: 650 GTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCW 697 G ++FS N R F +D + LA+ ++IT++++ DF+RN +IH CW Sbjct: 672 GLLIFSTNFRRFILD-EKLAE-QFDVKDITRESIPLDFSRNEKIHFCW 717 >UniRef50_Q1YPL5 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YPL5_9GAMM Length = 705 Score = 584 bits (1505), Expect = e-165, Method: Compositional matrix adjust. Identities = 307/703 (43%), Positives = 415/703 (59%), Gaps = 21/703 (2%) Query: 15 LLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYL 74 +L EL LGA + VHF G L Y++ +WSRLA+R+++PL + + LY Sbjct: 1 MLAQELLALGAESTKETVAAVHFVGTRELAYRACLWSRLANRVLMPLHNFSLDEEDQLYQ 60 Query: 75 GVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDA 134 I W E F+ T A+ F G + + N+ YG+ +VKDA+VD R+ RPNVD Sbjct: 61 ECLDIPWEEHFSHEQTIAIDFIGTSRLVDNTMYGSQRVKDAVVDRIRREEGERPNVDTKN 120 Query: 135 PDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGW----QPG 190 PDIR+ V HK +++LD+SG+ LH RGYR G APIKE LAAA++MR W + G Sbjct: 121 PDIRIQVRQHKGQVTVSLDISGESLHRRGYRSGQGSAPIKENLAAALLMRCKWPEMMKNG 180 Query: 191 TPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKG 250 LLDPMCGS TL+IE AM+A D APGL R R+GF+ W QHD+ +WQ + EA+ R G Sbjct: 181 AALLDPMCGSATLIIEGAMMAADIAPGLLRERYGFTDWKQHDQELWQSILDEAEQRKGAG 240 Query: 251 LAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNP 310 L F G D++ RV++ A N AG+ E I K + Q YG +L+NP Sbjct: 241 LEALDLDFRGYDANPRVLEFATLNIEKAGLDEHIRLAHKPIDQFGKA--TADYGLLLTNP 298 Query: 311 PYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPL 370 PYGERL L+ ++ LG +++ F GW ++F+ + +L L KQY+ NG + Sbjct: 299 PYGERLGDLDGLVPVYQKLGAVLQKNFQGWKAAVFTGNVELGRETDLTPTKQYQLFNGTI 358 Query: 371 DC--------VQKNYHVAESTPDSKPAMV----AEDYTNRLRKNLKKFEKWARQEGIECY 418 C ++ + + PA A+ NRL KN +K W + G+ CY Sbjct: 359 PCKLLVFEDLTSRSEKIEQRLNKPAPAQELTEGAKMVFNRLVKNQRKLNGWLNKTGVSCY 418 Query: 419 RLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLV 478 R+YDAD+PEY+VAVD Y D V VQEY PP TID AR+R ++ A A + Sbjct: 419 RVYDADIPEYSVAVDIYEDSVHVQEYLPPNTIDDKVARERFAEVKQAVKEFAKDARGHIH 478 Query: 479 LKTRERQKGKNQYQKLGE-KGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMS 537 K R RQKG +QY++ E + + V E NA NL+DYLDTGLFLDHR RRM+ +++ Sbjct: 479 YKERRRQKGDSQYERFNEGPSDTITVFEGNAQFEANLSDYLDTGLFLDHRPVRRMVSELA 538 Query: 538 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQAD 597 KGK LNLF YT + +V A LGGA+ T ++DMS TYL+WA+RN LN ++ + H L++AD Sbjct: 539 KGKSLLNLFCYTAAVSVQAALGGAKRTLSIDMSNTYLDWAQRNYDLNNISAKNHHLLRAD 598 Query: 598 CLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 657 CL WL EQFD+IF+DPPTFSNSK+M+ DVQRDH L+++ L G ++FSNN Sbjct: 599 CLKWLETDGEQFDVIFLDPPTFSNSKKMDSILDVQRDHGDLIRNSMAKLAPDGVLIFSNN 658 Query: 658 KRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLIT 700 R F+M D L A+ IT +TL DF RN +IHN W IT Sbjct: 659 FRKFKM--DELVARQFNAENITPQTLDMDFERNPRIHNVWRIT 699 >UniRef50_A5EX48 Ribosomal RNA large subunit methyltransferase L n=1 Tax=Dichelobacter nodosus VCS1703A RepID=RLML_DICNV Length = 729 Score = 582 bits (1499), Expect = e-164, Method: Compositional matrix adjust. Identities = 321/718 (44%), Positives = 428/718 (59%), Gaps = 28/718 (3%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 S A+G E++L+ E E LG + V K Y+ +WSR ASR++L L Sbjct: 7 SCVLPCAKGSEQVLQQEAEQLGVQTLSIAPAVVRGKASLLTFYRLCLWSRTASRVLLVLA 66 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 V S +Y + I W + P TFAV F+GL IRN+Q+GA+K+KDA+VD Sbjct: 67 HENVDSAEAIYEVARNIAWEDHIAPDDTFAVRFNGLGCGIRNTQFGALKIKDAVVDRLRD 126 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 RP+VD PDI ++ LHK ++ALDLSG LH RGYR G AP+KETLAA ++ Sbjct: 127 IVKRRPDVDAKTPDILLDAHLHKNELTLALDLSGGSLHERGYRQAHGAAPMKETLAATLL 186 Query: 183 MRSGW-----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 R+ W QP T L+DP CG+GTL++EAAM+A D AP L R WGF+ W H A+W Sbjct: 187 YRARWHEFCAQPAT-LIDPTCGAGTLVLEAAMMAADYAPNLQRQHWGFTRWQNHRPALWN 245 Query: 238 EVKAEAQTRARKGLAEYSSH-FYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 +V EAQTR G+A S + FYG D + VI AR NA+ G+ + + F K + LT Sbjct: 246 KVIDEAQTRKNAGIAALSDYVFYGYDQNPVVIAAARANAKRLGLEDFVHFAPKRLEDLTA 305 Query: 297 PLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQ 356 G G V++NPPYGERL LI ++ LG K W +++ +++ LL ++ Sbjct: 306 DF--GARGFVVANPPYGERLGEVQELIPTYAALGHWFKTLPADWEMAVIASNDALLKRMR 363 Query: 357 LRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMV--------------AEDYTNRLRKN 402 LRA K Y+A NG + +Y +E P+S+ A+ + NRL+KN Sbjct: 364 LRAHKYYQAFNGTIAAQIVHYRRSEQ-PESQETAAQQKLAQASVGISEQAQMFANRLQKN 422 Query: 403 LKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDI 462 ++K A + + YR+YD D+PEY VA+D Y D VV+QEYAPPKTID KA+QRLFD+ Sbjct: 423 IQKIRPSAERAQTDAYRIYDQDMPEYAVAIDCYGDAVVIQEYAPPKTIDPQKAQQRLFDV 482 Query: 463 IAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEK-GEFLEVTEYNAHLWVNLTDYLDTG 521 + VL + + LKTR+RQ GK QY EK E V E A VNL+DYLDTG Sbjct: 483 LQVVPEVLALDERSVFLKTRQRQTGKTQYNPAAEKRNEERIVYEGAARFLVNLSDYLDTG 542 Query: 522 LFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNL 581 LFLDHR RR+L + + GK LNLF YT +A+V A LGGA TT+VD+S TYL+WA+RN Sbjct: 543 LFLDHRPMRRLLFEQAAGKRVLNLFCYTATASVQAALGGASYTTSVDLSPTYLDWAQRNF 602 Query: 582 RLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKD 641 LN L+ R HRL +AD +AWL QFD+IF DPPTFSN+K+ + FDVQRD +AL+ Sbjct: 603 DLNALSDR-HRLQRADVMAWLHSGKSQFDMIFCDPPTFSNTKKEQRVFDVQRDQIALIDG 661 Query: 642 LKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 + L AGG + FSNN RGFR++ A+ + QEI++ T+ DF R +IH W I Sbjct: 662 CMQRLAAGGILYFSNNYRGFRLEEALCARYCV--QEISENTIDFDFKRRPKIHRVWKI 717 >UniRef50_A0L8B5 Ribosomal RNA large subunit methyltransferase L n=1 Tax=Magnetococcus sp. MC-1 RepID=RLML_MAGSM Length = 722 Score = 573 bits (1478), Expect = e-162, Method: Compositional matrix adjust. Identities = 313/729 (42%), Positives = 429/729 (58%), Gaps = 34/729 (4%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M FA+TARGLE L EL+ +GA + GV F+GD + ++ +WSR+A+RI+L Sbjct: 1 MYRYFATTARGLEPALAAELKRMGAKSVRPASAGVGFEGDLEIGLRACLWSRVATRIILS 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L + V + LY V I W + + T +V G NDTIR++ +G K+KDA+VD Sbjct: 61 LKKIDVSTPEALYASVLEIPWEDHLDAEGTLSVDCIGTNDTIRHTNFGGQKLKDAVVDRI 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 K RP+V R+ PD+R+N+ + + +DLSG+GLH RGYR R G AP+KE LAAA Sbjct: 121 RDKKGSRPSVARERPDLRINLGIRGNEGRVGIDLSGEGLHRRGYRLRTGDAPLKENLAAA 180 Query: 181 IVMRSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGW--AQHDEA 234 ++ +GW+ G P +DPMCGSGTL IEAAM+A D APG R +GF W A Sbjct: 181 LLYFAGWEEQARLGAPFVDPMCGSGTLPIEAAMMAGDIAPGSLRRYFGFRRWRGASGIAE 240 Query: 235 IWQEVKAEA---QTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDV 291 +WQ + E+ Q +A+ + E DSDA ++ A+ N A + I +DV Sbjct: 241 LWQRLADESIERQNQAKMPIIE------AGDSDANMVHIAQANIEEAELEGHIRLHQRDV 294 Query: 292 A--QLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASP 349 A Q P P G +++NPPYGERL L L + LG ++ GW + Sbjct: 295 AAWQKGADWPDRP-GVLVTNPPYGERLGEVVELKGLFAKLGMLLNGPLLGWRSGVLMGDV 353 Query: 350 DLLSCLQLRADKQ-YKAKNGPLDC------VQKNYHVAESTPDSKPAMV--------AED 394 S + L Q NGP+ C + A+ P KP + A+ Sbjct: 354 LWQSAMGLPQQGQRMDLNNGPIPCAYILHGTEPKPQAAKGAPAPKPGLQQGVVSPENAQM 413 Query: 395 YTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHK 454 + NRL+KN K+ +KW +E + CYRLYDAD+PEY +AVDRY +WVVVQEY P +I Sbjct: 414 FANRLKKNQKRLKKWVTRENVRCYRLYDADMPEYALAVDRYEEWVVVQEYQAPSSIPDAD 473 Query: 455 ARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNL 514 A +RL D + VLG+ P ++V+K R+RQKG NQY K+ +G+ + V E + VNL Sbjct: 474 AHRRLQDACSVLPEVLGVPPERVVVKQRKRQKGYNQYDKMANRGQKVLVAEQGLNFEVNL 533 Query: 515 TDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYL 574 TDYLDTGLF DH RR + Q + + FLNLF YTG+ATVHA GGA +TT+VD+S TYL Sbjct: 534 TDYLDTGLFPDHAPMRRRIQQEAANRRFLNLFCYTGTATVHAAAGGALTTTSVDLSNTYL 593 Query: 575 EWAERNLRLNGLTGR-AHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQR 633 EWA+RN+ LNG G HR I+A+C+ W+ ++ FDLIF+DPPTFSNSK M ++FD+QR Sbjct: 594 EWAQRNMELNGFKGEHQHRFIKANCMQWIATTDQTFDLIFLDPPTFSNSKSMLESFDIQR 653 Query: 634 DHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQI 693 D + L+ + RLL G + FS N++ F+++ D L+ L +EITQ+TL DF R I Sbjct: 654 DQVTLIGGVARLLNPDGVLYFSTNRKKFKLEQDLLSAQNLHMEEITQQTLDPDFHREPPI 713 Query: 694 HNCWLITAA 702 H CW IT A Sbjct: 714 HRCWRITCA 722 >UniRef50_A3JG83 Predicted methyltransferase n=1 Tax=Marinobacter sp. ELB17 RepID=A3JG83_9ALTE Length = 719 Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust. Identities = 304/710 (42%), Positives = 421/710 (59%), Gaps = 31/710 (4%) Query: 15 LLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYL 74 +L EL+ G + GV +G Y++ +WSRLA+R++L + E SD +LY Sbjct: 1 MLADELDGFGLSLVRHAPAGVWVEGTLEGGYRACVWSRLANRVILHVAEVAATSDDELYD 60 Query: 75 GVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDA 134 GV ++W + +F V+F G N+ IRN+QYGA +VKD IVD FT RP V+ Sbjct: 61 GVVHLDWQQHIAVSGSFKVNFIGENEAIRNTQYGAQRVKDGIVDRFTANGGKRPAVEAKT 120 Query: 135 PDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGW----QPG 190 PD+ V+ LH+ ++ +DLSG LH RGYR G AP+KE LAAA+++RSGW G Sbjct: 121 PDVIVSARLHRGQLTLGIDLSGHSLHQRGYRAEQGQAPLKENLAAALLIRSGWPETVAAG 180 Query: 191 TPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKG 250 +DPMCGSGTLLIEAA++A D APG + +GF W HD +W ++ E + RA G Sbjct: 181 GDFIDPMCGSGTLLIEAALMALDIAPGRRQDGFGFEKWLGHDAELWMSLRQEVERRAHAG 240 Query: 251 LAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNP 310 G D D RV+ AR N + AG+ ++ + +L G V++NP Sbjct: 241 KQGRIPRIAGFDEDRRVLSTARNNLQRAGLDSIVELTEIPLQELELSGDWAEQGLVMTNP 300 Query: 311 PYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPL 370 PYGERL +L ++ LG +K W L +F+ +P+ + LR+ KQYK NG L Sbjct: 301 PYGERLSERKSLAEIYQALGAAVKRVTPNWRLGVFTGAPEFGKSIGLRSFKQYKLFNGKL 360 Query: 371 DCVQKNYHVAESTP------------------DSKPAMVAEDYTNRLRKNLKKFEKWARQ 412 + V E++ + + AM+A NRL+KN+K +WAR+ Sbjct: 361 PAQLLLFTVDEASARIPKDPAAPGEILPRIANEERAAMLA----NRLKKNVKSIGQWARK 416 Query: 413 EGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGI 472 + I CYRLYDAD+PEY +A+D Y DWV VQEY PKTID AR+RL + +A LGI Sbjct: 417 QNISCYRLYDADMPEYALAIDIYNDWVHVQEYMAPKTIDERAARERLSEALAVIPEALGI 476 Query: 473 APNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRM 532 A ++LV K R RQ G +QY+K GEF EV E+ L VNL DYLDTGLFLDHR R+ Sbjct: 477 ARDRLVCKQRLRQTGTSQYEKQAASGEFFEVQEHGCTLKVNLKDYLDTGLFLDHRPLRQW 536 Query: 533 LGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHR 592 + Q ++GK FLNLF YTG+ATVHA GGA + ++DMS TY+ WA+ NL LN R H+ Sbjct: 537 IQQNARGKRFLNLFCYTGAATVHAIAGGASRSLSLDMSHTYVSWAKDNLELNHADPRKHQ 596 Query: 593 LIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAG 649 + DCLAWL + +++FDLIF+DPPTFSNS +M D+Q+DH L++ + L Sbjct: 597 VDAVDCLAWLASKPKPDQRFDLIFMDPPTFSNSAKMIGVLDIQKDHAKLIRQAMQRLTND 656 Query: 650 GTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 G ++FSNN R F++D + A+ + +EI++ T+ +DF RN +IH CW I Sbjct: 657 GLLVFSNNFRRFKLDDEVSAEFAV--EEISKSTIDKDFQRNPRIHRCWNI 704 >UniRef50_C7RA96 Putative RNA methylase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RA96_KANKD Length = 718 Score = 565 bits (1456), Expect = e-159, Method: Compositional matrix adjust. Identities = 306/716 (42%), Positives = 422/716 (58%), Gaps = 24/716 (3%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 +AS +G+E LL EL +LGA + + F+GD L Y++ + SRLA+RI L L + Sbjct: 3 FYASCPKGVEALLIDELTSLGATNLKEHPSHIVFEGDLELAYKACLHSRLANRIYLCLLD 62 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVH-FSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + S D+Y V I W+ F+ TF V + ND +R+S + A KVKDA+VD + Sbjct: 63 EEFTSVDDMYQKVNGIEWSWHFDMQQTFVVDAIARKNDDVRHSGFAAQKVKDAVVDYYQE 122 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + RP++D+D PD R++ ++ I +DL+G LH RGYR +G APIKE LAAA++ Sbjct: 123 RFEQRPSIDKDNPDYRIHAIINGRQLKIGIDLAGRSLHQRGYRPISGRAPIKENLAAALL 182 Query: 183 MRSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 +R+GW + G DPMCG+GT+L+EA M+A D APGL + F W QHD +WQ Sbjct: 183 IRAGWPELSKQGYSFHDPMCGTGTILVEAVMIACDMAPGLFNPTYSFENWKQHDAELWQT 242 Query: 239 VKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 A A+ + K ++ F GSDS + ++ A+ AG ELI +D+ + Sbjct: 243 TIASARRQFNKNKLALNNRFIGSDSHRKSLELAKEVILNAGFDELIEVSQQDIRRPKLEA 302 Query: 299 PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 K P G +LSNPPY ERL E +I L+ G +K+ GW ++ + + +R Sbjct: 303 FKEP-GLLLSNPPYAERLGEEDEVIQLYRDFGDYIKSHCIGWQAAIITNEVSFAKAMGMR 361 Query: 359 ADKQYKAKNGPLDCVQKNYHVAEST--PDSKPAMVAEDY-----------TNRLRKNLKK 405 + KQYK KNG +DC + V E P +V D+ NR+ KN ++ Sbjct: 362 SHKQYKFKNGAIDCQLYLFDVKEENFYKPFDPTVVNPDWDKNLSEGAVMLKNRMIKNQQR 421 Query: 406 FEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAA 465 + + +Q + CYRLYDADLPEY+ A+D Y D V +QEYAPPK I A++RL +I+ Sbjct: 422 LKSYLKQNDVTCYRLYDADLPEYSAAIDVYDDMVHIQEYAPPKDIPPKVAQRRLNEIVRV 481 Query: 466 TISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLD 525 T +L I +++ LK R+RQKG +QYQK E+ +F V E +VNL YLDTGLFLD Sbjct: 482 TSGLLQIPESEIALKQRQRQKGDSQYQKHSEEEQFQVVHEQGLQFYVNLNRYLDTGLFLD 541 Query: 526 HRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNG 585 HR R+M+ + GK FLNLF+YTGS +V+A GGA+ TTTVDMSRTYL WA +N LN Sbjct: 542 HRKTRKMIMAEANGKRFLNLFAYTGSVSVYAAKGGAK-TTTVDMSRTYLNWAVKNFGLNS 600 Query: 586 LTGRAHRLIQADCLAWLREANEQ--FDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLK 643 + H +Q+DCL WL EA Q +DLIF+DPPTFSNSKRM+ FDVQRD + L+ Sbjct: 601 IPIYGHEFVQSDCLQWLDEAQGQRTYDLIFLDPPTFSNSKRMDVTFDVQRDQVELINQTM 660 Query: 644 RLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 LL G + FSNN + F M+ + K QEIT +TL DF ++R H CWLI Sbjct: 661 NLLDKKGKLYFSNNFKKFEMETE--LKEHFDVQEITARTLPSDFQKSRNHHRCWLI 714 >UniRef50_Q21JW7 Ribosomal RNA large subunit methyltransferase L n=3 Tax=cellular organisms RepID=RLML_SACD2 Length = 752 Score = 560 bits (1443), Expect = e-158, Method: Compositional matrix adjust. Identities = 307/739 (41%), Positives = 426/739 (57%), Gaps = 45/739 (6%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 LF S ++G E LL+TELE L + + GV+ +Y+ +W+RLA++++LPL Sbjct: 14 LFVSCSQGWEGLLQTELEQLAVGDVKPGHAGVYVSATLEQMYKICLWTRLATKVLLPLDS 73 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 + + D++ ++W + PGA+ V F G ND +RN+Q+GA +VKDA+VD+ Sbjct: 74 GPIETGDDVHTVASKVDWPSLMKPGASLKVDFIGTNDAVRNTQFGAQRVKDAVVDSIRHA 133 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 RPNV++ PD+R++ LH++ I++DLSGD LH RGYR + G AP+KE LAAA+++ Sbjct: 134 GGERPNVEKMQPDVRIHARLHRDELHISIDLSGDSLHRRGYRQKQGGAPLKENLAAALLL 193 Query: 184 RSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 R+GW + G LLDPMCGSGTLLIE A++A APGL R ++GF W H+ W +V Sbjct: 194 RAGWPTIAEQGGALLDPMCGSGTLLIEGALIAYSIAPGLSRDKFGFECWTGHNADTWAQV 253 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 +A+ K L E S +G DSD V + A N G+ +I K V +L P Sbjct: 254 VNDAKAIRDKNLQEKSFDIFGYDSDYYVTKAAEMNCEALGLQNVIHIANKPVEELKQPTH 313 Query: 300 KGPY-GTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 K G V+ NPPYGERL L + +L +K QF GW ++F+++P+L +LR Sbjct: 314 KVLVPGLVIVNPPYGERLGEVNELRTTYQILAHQVKQQFEGWTFAVFTSNPELAKETRLR 373 Query: 359 ADKQYKAKNGPL-----------------------DCVQKNYH----------VAESTPD 385 A+K+ K KNG L VQ + V ++ D Sbjct: 374 ANKKNKFKNGALPAELFVYSVLSADDAKLRKDKLTQAVQTDEDGQVENASGAWVRKNLCD 433 Query: 386 SKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYA 445 A NR++KNLK+ +K +Q YR+YDAD+PEY+ A+D Y D V +QEYA Sbjct: 434 KPLTEAATMVANRIKKNLKRLKKSVKQNDWHGYRVYDADMPEYSAAIDLYNDQVHIQEYA 493 Query: 446 PPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEF----- 500 PKTIDA KA R + L NKL +KTR+R KGK QY+K + F Sbjct: 494 APKTIDADKAEARFETLKHGAAVALQAPDNKLFVKTRKRNKGKAQYEKQTDTQGFDAERC 553 Query: 501 LEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGG 560 ++V E NA LWVNL DYLDTGLFLDHR R + + + GK FLNLF YT +A+V A LGG Sbjct: 554 IQVQEGNAKLWVNLQDYLDTGLFLDHRPLRMRIHKEATGKRFLNLFCYTATASVQAALGG 613 Query: 561 ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFS 620 A + +VDMS TYLEWA+ N RLN + HRL++ADC WL + E FDLI +DPPTFS Sbjct: 614 ATESVSVDMSNTYLEWADNNFRLNNVHLARHRLVRADCFDWLNKCREGFDLIMLDPPTFS 673 Query: 621 NSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQ 680 NSK+M D D+Q+D + L+ +L GGT+ FS N R F++D + + + I+ Sbjct: 674 NSKKMSDVLDIQKDQVRLISRCMDILNPGGTLYFSTNFRQFKLDEQISTRYVV--ENISA 731 Query: 681 KTLSQDFARNRQIHNCWLI 699 T+ +DF N +IH CW I Sbjct: 732 ATIDEDFKGNPKIHYCWKI 750 >UniRef50_B9ZLS0 Putative RNA methylase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZLS0_9GAMM Length = 734 Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust. Identities = 323/730 (44%), Positives = 440/730 (60%), Gaps = 46/730 (6%) Query: 6 ASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECK 65 A+ ARGL LL EL LGA + + G VHF D ++Y+ L+ SR+ASRI+LPL Sbjct: 16 ATVARGLGPLLAEELATLGATDAREEGGAVHFSADLEMLYRVLLGSRIASRILLPLARFD 75 Query: 66 VYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNL 125 Y +AI+W + +PGATFAV G + IR++ + +++KDA+ DAF Sbjct: 76 QPDGDGCYTAARAIDWPALLDPGATFAVEVGGKSHHIRHTHFAGVRIKDAVADAFREATG 135 Query: 126 PRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRS 185 RP+VD PD+R+ + L + A +++D+ GLH RGYR G AP++E LAAA++ R+ Sbjct: 136 ARPDVDPKHPDVRILLQLQGDHARLSVDIGNGGLHRRGYRGAGGAAPLRENLAAALLARA 195 Query: 186 GWQP---GTP----LLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 GW G P LLDP CGSGT++IEAA++AT APGL R + GWA HD A+WQ Sbjct: 196 GWPARVEGDPQQAQLLDPFCGSGTVVIEAALIATRTAPGLLRHDFRPQGWAGHDAALWQR 255 Query: 239 V--KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 A A R +G GSD D R +Q AR AR AG+ FEV DV LT Sbjct: 256 CVDTARAAVRPWQG-----PTLLGSDRDPRAVQAARQAARTAGVAACTRFEVADVLTLT- 309 Query: 297 PLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQ 356 P P G ++SNPPYGER+ +P LI L+SLLG +K FGGW ++L A L Sbjct: 310 --PPAPNGLLISNPPYGERIGDQPELIKLYSLLGEHLKQAFGGWQVALLVADTTDSRRLG 367 Query: 357 LRADKQYKAKNGPLDC--VQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEG 414 LRA ++Y+ NGP+DC ++ + H E ++ P A ++ NRLRKNLK ++WAR++G Sbjct: 368 LRATRKYRVHNGPIDCQLLEFDIHAREGQAEAAPP--APEFANRLRKNLKHLDRWARRQG 425 Query: 415 IECYRLYDADLPEYNVAVDRY--ADWVV---VQEYAPPKTIDAHKARQRLFDIIAATISV 469 + CYR+Y ADL EY + +DRY D V +QE+A P +++ +A RL +AAT+ V Sbjct: 426 VTCYRIYSADLDEYPLLIDRYQATDGSVHLHLQEFAAPASVEPARAEARLRGALAATLEV 485 Query: 470 LGIAPNKLVLKTRERQKGKNQYQK--LGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHR 527 G+AP L K R QKG++QYQ+ + F V E+ L V L YLD+GLFLDHR Sbjct: 486 TGVAPAHLHYKQRRAQKGRSQYQRAETAQPAPFW-VEEHGCRLKVELDAYLDSGLFLDHR 544 Query: 528 IARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT 587 RR L + +G LNLF YT + + HA +GGAR T +VD+S TYL+WA NL NG Sbjct: 545 PMRRRLQEECRGLRLLNLFCYTAAVSAHAAVGGARQTVSVDLSNTYLDWAADNLAANGFE 604 Query: 588 -----GRA------HRLIQADCLAWLREANE----QFDLIFIDPPTFSNSKRMEDAFDVQ 632 GR+ H L++ADC+ W+REA + +F+ IF+DPPTFSNSKR E F+VQ Sbjct: 605 ATVRDGRSRRRPDTHALLRADCITWVREAADDPALRFERIFLDPPTFSNSKRTEADFEVQ 664 Query: 633 RDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQ 692 RDH+ L++D RLL G + FS N+R F +D + LA GL+A++IT+ TL +DF R Sbjct: 665 RDHVELIRDAARLLTEDGILYFSTNRRRFELDTEALA--GLEARDITRDTLDEDFRRPPP 722 Query: 693 IHNCWLITAA 702 H CW I+ A Sbjct: 723 PHRCWAISNA 732 >UniRef50_B0VAL5 Ribosomal RNA large subunit methyltransferase L n=16 Tax=Acinetobacter RepID=RLML_ACIBY Length = 734 Score = 548 bits (1412), Expect = e-154, Method: Compositional matrix adjust. Identities = 302/726 (41%), Positives = 423/726 (58%), Gaps = 31/726 (4%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 +N + + A GLE LL+ E+E LG + G + +G Y+ MWSRLASR++LP Sbjct: 7 LNHYWITCADGLETLLQEEIEQLGTKVTERKAGRLIIEGTLEHAYRICMWSRLASRVLLP 66 Query: 61 LGECKVYSDLD-------LYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVK 113 + ++ D LY G + +W+ +F P +TFA+ + N+Q+ ++VK Sbjct: 67 IHTYELERTHDARDVAEELYEGAISFDWSLIFAPQSTFAIRLHAEREIKVNTQFATLRVK 126 Query: 114 DAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPI 173 D +VD+F RP++D P+I + V K + LDLSGD LH RGYR API Sbjct: 127 DGVVDSFMEAVGRRPSIDTKQPEITLYVLAGKTEHTYCLDLSGDSLHKRGYRRFMTDAPI 186 Query: 174 KETLAAAIVMRSGWQPGTP--LLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQH 231 KE LAAAI+ ++ Q P +LDPMCGSGT +IEA M+ TDRAPGL R R+GF+GW H Sbjct: 187 KENLAAAILQKAKLQERNPEIVLDPMCGSGTFIIEALMILTDRAPGLVR-RFGFNGWHGH 245 Query: 232 DEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGEL---ITFEV 288 D +W +KAEA R K L + FY D+D ++ R N AG +L I E Sbjct: 246 DRELWLSLKAEAAERHEKALEQPLPKFYAYDADWEAVKATRENIIAAGFEKLLGDIQIEE 305 Query: 289 KDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSAS 348 + +A + + +++NPPYGERL + + +L+ L +++ F ++ +A Sbjct: 306 RTLADWPDFGAENKTAFIVTNPPYGERLGDKASNRSLYLGLSALLQKNFPNQYAAIIAAQ 365 Query: 349 PDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMV-----------AEDYTN 397 + L A + + NG L + + + ++P + A+D+ N Sbjct: 366 IEQADVLAFEAPETLRLMNGKLPIYVR-FGTVKPEKVTQPFLANWQAQPVEMEEAQDFAN 424 Query: 398 RLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQ 457 RL+KN+ +KWA +E I C RLYDADLP++N+AVD Y D + VQEYAPPK ID KA++ Sbjct: 425 RLQKNMTALKKWATKENIYCLRLYDADLPDFNLAVDLYGDRLHVQEYAPPKKIDPEKAKK 484 Query: 458 RLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDY 517 R +AA +V G+ + + +KTR RQ G NQY K + V E A + VNLTDY Sbjct: 485 RFNLALAAIRAVTGLNRDAIFIKTRARQTGTNQYTKQSTANKRFIVQEGKAKILVNLTDY 544 Query: 518 LDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWA 577 LDTGLFLDHR R + Q ++GK FLNL+SYT +A++HA LGGA STT+VD+S TYL W+ Sbjct: 545 LDTGLFLDHRQMRLRIAQEARGKHFLNLYSYTSTASLHAALGGAASTTSVDLSNTYLSWS 604 Query: 578 ERNLRLNGLT----GRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQR 633 + N LNGLT H +DC WL+E +EQ+DLIFIDPPTFSNSK+ FDVQR Sbjct: 605 KENFVLNGLTVDHADEQHMFFASDCFEWLKEGHEQYDLIFIDPPTFSNSKKFHGTFDVQR 664 Query: 634 DHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQI 693 DH++L+K L + GT+ FSNN RGF MD + A + +EIT +T+ DF RN++I Sbjct: 665 DHVSLIKRAMNRLTSEGTLYFSNNYRGFEMDEEIEALYDV--EEITSETIGPDFKRNQKI 722 Query: 694 HNCWLI 699 H W I Sbjct: 723 HRAWKI 728 >UniRef50_D2U8T0 Putative rna methylase protein n=1 Tax=Xanthomonas albilineans RepID=D2U8T0_XANAL Length = 726 Score = 548 bits (1412), Expect = e-154, Method: Compositional matrix adjust. Identities = 315/728 (43%), Positives = 423/728 (58%), Gaps = 43/728 (5%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 F S A+GLE LL EL G + GV+ +G R ++++WSRLASR++ PL Sbjct: 3 FFVSCAKGLEYLLVDELLAFGVAQATATVSGVNVEGTLRDAQRAVLWSRLASRVLWPLHA 62 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAV--HFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 + + LY GV + W E P T AV H SG I +++Y A +VKDA+VD Sbjct: 63 FECPDEAALYAGVAVVPWCEHLTPEHTLAVDAHVSGAG--ITHARYAAQRVKDAVVDTLR 120 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 L RP+VD + PD+R+N+ L K A++++DL G LH RG+R AP+KE LAAA+ Sbjct: 121 NAGLERPSVDVEHPDLRLNLSLRKGRATVSVDLGGGSLHRRGWRQAQNEAPLKENLAAAL 180 Query: 182 VMRSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHR-----GRWG-------- 224 ++R W G LLDPMCGSGTLLIE A++A D APGL R R G Sbjct: 181 LLRGQWPALYAQGGCLLDPMCGSGTLLIEGALMAADVAPGLLRVALTAARRGDAVPTASS 240 Query: 225 --FSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGE 282 S W D W E+ AEA+ R G A YG D D I+ AR NA+ AG+ Sbjct: 241 AAPSRWLGFDLTAWDELLAEARQREAAGRAALRPVLYGGDIDPHAIRAARENAQAAGVAV 300 Query: 283 LITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNL 342 ITFEV+DVA L P+ G V+ NPPY ERL ++ AL+ LG +K W Sbjct: 301 AITFEVRDVADLRAPV--SALGAVVCNPPYDERLVAD---AALYRRLGEALKRAVPQWRA 355 Query: 343 SLFSASPDLLSCLQLRADKQYKAKNGPLDC---VQKNYHVA-ESTPDSKPAMV--AEDYT 396 S+ + DL LRA K+Y+ NG L+C V VA ++ ++ A+ A+ Sbjct: 356 SVLCGNADLAYATGLRAAKKYQMFNGALECPLIVCDPIAVAPRASAEASHALSDGAQMVA 415 Query: 397 NRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD-------WVVVQEYAPPKT 449 NRLRKNL+KF+ W +E + C+R YDADLPEY A+D Y + ++ VQEYA P+ Sbjct: 416 NRLRKNLRKFKNWRMREQVGCFRAYDADLPEYAAAIDVYQEDAGQARTFLHVQEYAAPEN 475 Query: 450 IDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAH 509 I R+R +++AA V + ++ LKTRER KG ++Y + ++GEFL V E++A Sbjct: 476 IPDADVRRRRNELLAAAREVFAVPAEQVALKTRERGKGGSKYGRFEQRGEFLVVREHDAL 535 Query: 510 LWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDM 569 L VNL DYLDTGLFLDHR R + Q ++GK FLNLF YTG A+V A + GA STT+VD+ Sbjct: 536 LRVNLFDYLDTGLFLDHRPLRGAMAQQARGKRFLNLFCYTGVASVQAAVAGADSTTSVDL 595 Query: 570 SRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAF 629 S TYL+W NL NG G HRL+QAD L WL ++D+IF DPPTFSNS R ED F Sbjct: 596 SGTYLQWCADNLAFNGKGGAQHRLVQADALTWLEAEKNRYDVIFCDPPTFSNSARAED-F 654 Query: 630 DVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFAR 689 D+QR+H+ L++ L G + FSNN R F+++ + LA QEI+ +T++ DF R Sbjct: 655 DIQREHVRLLRAAVTRLTPEGVLYFSNNFRRFKLEENALAAFA-SCQEISAQTIAPDFER 713 Query: 690 NRQIHNCW 697 N +IH W Sbjct: 714 NPRIHRAW 721 >UniRef50_Q31IC8 Ribosomal RNA large subunit methyltransferase L n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=RLML_THICR Length = 734 Score = 543 bits (1399), Expect = e-153, Method: Compositional matrix adjust. Identities = 289/735 (39%), Positives = 432/735 (58%), Gaps = 38/735 (5%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M FA+ +GL ELL+ EL GA + G F GD + Y+S +WSRLA+RI L Sbjct: 1 MCRFFATAPKGLNELLREELTTFGAENIKTQPTGATFDGDLEVGYRSCLWSRLANRIYLV 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L E ++ + L VQ+I+W++ + TFAV FSG I +S YGA+K+KD IVD F Sbjct: 61 LLETELPNQEALSSVVQSIDWSKHIDKEGTFAVSFSGQGLGITHSHYGALKIKDGIVDYF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGI-APIKETLAA 179 RP++D + PDIRV+ L++ +++LDLSG LH RGYR+ + AP+KE +AA Sbjct: 121 REHYQVRPSIDTEVPDIRVHGHLNRNQLTLSLDLSGYSLHQRGYREGIQVEAPLKENVAA 180 Query: 180 AIVMRSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHR-GRWGFSGWAQHDEA 234 AI+MR+ W Q G DPMCGSGT L+EAA++A+D APG+ + G + W HDE+ Sbjct: 181 AILMRANWPEIAQQGGAFYDPMCGSGTFLVEAALMASDTAPGVAKSGEMLLNYWLGHDES 240 Query: 235 IWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQL 294 +WQ++ EA+ R + GL ++ + YGSD + + AR + + AG ++I + V Q Sbjct: 241 LWQKLVEEAEQREQVGL-KHLPNIYGSDISHKSLDVARNSIQAAGYDDVIEIKQMAVEQG 299 Query: 295 TNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSC 354 P G ++ NPPYGERL E + ++ LG +K +F W ++ + +L Sbjct: 300 RKWGDWSP-GLIVCNPPYGERLGEEETVKQIYLKLGEYLKAEFIHWKAAILTCHTELGMF 358 Query: 355 LQLRADKQYKAKNGPLDC----------------VQKNYHVAESTPDSKPAMVAED---- 394 L ++A + + NG + C +Q +AE +P + D Sbjct: 359 LGIKAKRSHDFFNGAMSCRLFRFEIEEEWFRQPALQPKQDLAEQVLQLQPDLADTDNAKM 418 Query: 395 YTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD-----WVVVQEYAPPKT 449 +NR+RKN+K + W +Q I YR+YDAD+PEY +A+D Y WVVV EYAPPKT Sbjct: 419 VSNRIRKNMKGLKSWVKQNDISAYRVYDADIPEYALAIDLYDTLESGLWVVVAEYAPPKT 478 Query: 450 IDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAH 509 ++ KA++RL++ ++ SV ++P ++V K R +QKG++QY++L E+ F + E Sbjct: 479 VNPTKAKRRLYEAMSVLPSVFNVSPERIVFKVRSQQKGQDQYERLDEQKAFFTIVENQTR 538 Query: 510 LWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDM 569 L VN TDYLDTG+FLDHR R+ + +++ GK LNLF YT +AT A G +S+ ++DM Sbjct: 539 LRVNFTDYLDTGIFLDHRQVRQEVAKLAAGKRLLNLFCYTATATAEAVKAGCKSSLSLDM 598 Query: 570 SRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQ----FDLIFIDPPTFSNSKRM 625 S+TYL WA+ N N + + H L Q + L WL A + FD+IF+DPP+FS SKRM Sbjct: 599 SKTYLYWAKHNFMCNDINEKQHVLQQENVLEWLETATQNPKDLFDVIFLDPPSFSTSKRM 658 Query: 626 EDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQ 685 + D+QRDH+ L++ +LL G ++FS N R F++D + + ITQ+T+ + Sbjct: 659 DGTLDIQRDHVDLIQKTLKLLSKDGKLIFSTNLRKFKLDKASFEP-DYQIENITQRTMPK 717 Query: 686 DFARNRQIHNCWLIT 700 D+ARN +IH WL + Sbjct: 718 DYARNMKIHQAWLFS 732 >UniRef50_A4BHH9 Putative uncharacterized protein n=5 Tax=Proteobacteria RepID=A4BHH9_9GAMM Length = 713 Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust. Identities = 297/704 (42%), Positives = 410/704 (58%), Gaps = 12/704 (1%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 + + +G+ LLK E+ L GV F G + Y+ +WSRLA+R+ LGE Sbjct: 9 FWVTCPQGVHGLLKQEIATLTDASVGDWHKGVEFTGSLKDAYRVCLWSRLANRVYAALGE 68 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 S L V ++NW E P T V F+G IR++++GA KVKD +VD + Sbjct: 69 SHEVSFDALQALVSSVNWDEHLRPSGTLKVVFTGRLPEIRDTRFGAQKVKDWVVDQIRER 128 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 + RPNVD PD+ + + ++ + ++L+G+ LH RGYR G APIKE LAAAI++ Sbjct: 129 HGVRPNVDPQNPDLTIFAQVARKKLFLGIELTGESLHRRGYRQATGPAPIKENLAAAILL 188 Query: 184 RSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 S W + G LD MCGSGTL+ EAAM+A D APGL R ++GF W QH W+E+ Sbjct: 189 ASDWPARAKRGESFLDLMCGSGTLVTEAAMIAADYAPGLGRTQFGFERWLQHSVNDWREL 248 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 EA+ R G E G D+D VI A G+ + + +A+ T P Sbjct: 249 LGEARERREAG-RETMPVVLGYDADGGVIASANATLEKLGLEKQARCYHRSLAEWTLPTH 307 Query: 300 KG-PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 G +SNPPYGERL +P L+ + +G I + Q GW L + ++ L + + Sbjct: 308 WALTPGLWVSNPPYGERLGDKPTLLRTYRRIGEIAREQLNGWELGMLTSDDILAREIGFK 367 Query: 359 ADKQYKAKNGPLDCVQKNYHVAESTPDSKPA--MVAEDYTNRLRKNLKKFEKWARQEGIE 416 + + NGP++ +HV E+ S PA E + NRL KN K+ +KW +E +E Sbjct: 368 PHDKRRLFNGPIETTYYQFHVDEAQKASAPANNEQVEAFRNRLLKNRKQLKKWVNRENLE 427 Query: 417 CYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNK 476 YRLYDAD+PE+ +A+D Y + VQEYAPPKT+ HKA+QRL + A V+ + +K Sbjct: 428 AYRLYDADIPEFALAIDVYGQALHVQEYAPPKTVPEHKAQQRLLQAVDALSDVMELPVSK 487 Query: 477 LVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQM 536 + +K RERQKG QY+K + E VTEY L VNL DYLDTGLFLDHR R+ + + Sbjct: 488 IAVKRRERQKGTRQYEKNDARNESFTVTEYGVTLKVNLHDYLDTGLFLDHRNMRKKVQET 547 Query: 537 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLN-GLTGRAHRLIQ 595 ++GK LNLF YTG+ T HA GGA STT+VD+S+TYL WA+ NL+LN G G HR I Sbjct: 548 ARGKRVLNLFCYTGAFTAHAYAGGAASTTSVDLSKTYLAWAKDNLQLNGGKAGPNHRFIH 607 Query: 596 ADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFS 655 +DCL WL E+ + FDLI +DPPTFSNS RM+D DVQRDH L+ +LL G ++FS Sbjct: 608 SDCLQWLSESKDTFDLIIMDPPTFSNSARMKDTLDVQRDHEFLVDHAMKLLSPDGVLIFS 667 Query: 656 NNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 NN R F +D D L + Q++T +++ +DF R+R H C+ I Sbjct: 668 NNYRKFYLD-DRLYE-AYAVQDVTGQSVPKDFTRSRP-HRCFEI 708 >UniRef50_Q2SCH1 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Proteobacteria RepID=RLML_HAHCH Length = 717 Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust. Identities = 306/714 (42%), Positives = 426/714 (59%), Gaps = 22/714 (3%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 SLFAS +GLE +L EL+ LGA + GV K D Y+ + SRLA+R++ L Sbjct: 5 SLFASCPKGLEYVLADELKTLGAEVLRTNPAGVEAKVDLAGAYRICLGSRLANRVLRLLQ 64 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + + LY +NW+E PG ++ + G + IR+S++GA VKDAI D F Sbjct: 65 STRTATRDGLYQAASEVNWSEHLRPGESYWIAAFGSSGDIRHSRFGAQVVKDAINDHFRD 124 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 ++L P +D+ + V + L K T ++ LDL+G LH RGYR AP+KE LAAAI+ Sbjct: 125 RDLELPVIDKRSGVQTVQLNLAK-TITLGLDLAGRSLHQRGYRQEGAAAPLKENLAAAIL 183 Query: 183 MRSGW-----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 R+GW + G +DPMCGSGTL++EAAM+A + APGL + F HD +W+ Sbjct: 184 YRAGWPEICGEDGC-FVDPMCGSGTLVVEAAMIAMNIAPGLLNPHFLFEKAPWHDPEVWR 242 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 V EA +A G + +G D + I+ A+ N AG+ + E T Sbjct: 243 GVYEEAMEKAVLGKRRWRGAIFGCDLNPAAIRTAKRNLSRAGLDRWVKLETASAMDFTPD 302 Query: 298 LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 ++ NPPYGERL E L +L+ LGR +K +G W +F++S +L + L Sbjct: 303 TEGCGQRLLVCNPPYGERLGQELELRSLYRALGRRLKTAYGEWKAGIFTSSVNLAKEIGL 362 Query: 358 RADKQYKAKNGPLDCVQKNYHVAESTPDS----KP--------AMVAEDYTNRLRKNLKK 405 RADKQY NGPL + V + P++ KP + A+ + NRL KNL K Sbjct: 363 RADKQYHLYNGPLATTLYLFDVYGNRPEAETPRKPQNASLEGISEQAQMFRNRLSKNLAK 422 Query: 406 FEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAA 465 + KWA+++ + YR+YDAD+PEY VA+D Y ++VQEYAPPK++D KARQRL D++ Sbjct: 423 WSKWAKKQQLSAYRIYDADMPEYAVAIDWYDGGIIVQEYAPPKSVDEEKARQRLLDVLEV 482 Query: 466 TISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLD 525 T +VLGI +L LK R++QKG QY+K + V E+ WVNL+DYLD+GLFLD Sbjct: 483 TPAVLGIDGGQLFLKQRKKQKGMLQYEKTDSSRKERTVEEHGCRFWVNLSDYLDSGLFLD 542 Query: 526 HRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNG 585 HR R + + S GK FLNLF YTG+A+VHA GGA +TT+VDMS+TYL WAERN LN Sbjct: 543 HRPTRYWIQKHSSGKRFLNLFCYTGAASVHAAAGGAATTTSVDMSQTYLSWAERNFHLNK 602 Query: 586 LTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRL 645 L+G HR ++A+ L WL+ + +DLIF+DPPTFSNSK+MED D+QRDH L++D RL Sbjct: 603 LSG-PHRFVRANVLDWLKAEHNSYDLIFLDPPTFSNSKKMEDVLDIQRDHAGLIEDCMRL 661 Query: 646 LRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 L GG ++FS N R F++D G+ + + T ++ +DF RN +IH CW I Sbjct: 662 LAPGGVLIFSCNYRRFKLD-SGIEQR-FAVENHTAASIPEDFKRNERIHQCWHI 713 >UniRef50_B0U0U4 Ribosomal RNA large subunit methyltransferase L n=18 Tax=Francisella RepID=RLML_FRAP2 Length = 718 Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust. Identities = 292/724 (40%), Positives = 425/724 (58%), Gaps = 41/724 (5%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 + FAS A+G+E LLK EL+ LG + + GV F+G Y+ ++S LAS++ML + Sbjct: 5 TFFASCAKGIELLLKDELDALGISSSEKL-AGVEFEGSFEDAYKVCIYSHLASQVMLKIA 63 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 KV LY + +INW + F+ F + SG + N+ + + K KDAIVD F R Sbjct: 64 TQKVTDQQALYDFISSINWLDYFDVNTAFKIIISGKHYDFNNTMFVSQKTKDAIVDQFRR 123 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + RPN+D D PD + + LHK+ ++ L L+ + LH R YR G AP+KE+LAAAI+ Sbjct: 124 ETNERPNIDTDNPDNIIKLHLHKQYVNVFLCLNIESLHKRSYRQFQGQAPLKESLAAAIL 183 Query: 183 MRSGW-------QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAI 235 +++GW QP L+DPMCGSGT+LIEAA++A + AP L + HDE + Sbjct: 184 IKAGWLDELKKEQP--ILIDPMCGSGTILIEAALMAKNIAPVLLNKEFKLFNSKLHDEDL 241 Query: 236 WQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLT 295 W + E +A+K ++ G D D V+ +A N AG+ +++ + +D+ L Sbjct: 242 WNNL-LEIAKKAQKPT---NAIIQGYDIDNNVLDKADRNIYQAGVEDVVNIKRQDIRDLE 297 Query: 296 NPLPKGPYGTVLSNPPYGERL--DSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLS 353 N L G +++NPPYGERL D L+ + + G + F GW +++ ++ + + Sbjct: 298 NELESE--GLIVTNPPYGERLYGDQLDELLDIFNGFGDRLSQDFYGWKVAILTSFDESIK 355 Query: 354 CLQLRADKQYKAKNGPLDCV------------------QKNYHVAESTPDSKPAMVAEDY 395 +QLR K+ K NG ++ V +KN +AE++ + D+ Sbjct: 356 EMQLRTTKKNKFYNGAIETVLYQFDINEHARFKHESQLEKNIRLAEASALKSDEHI--DF 413 Query: 396 TNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKA 455 +N+L+KNLK + W +Q G+ECYRLYDAD+P + VAVD Y + V +QEY TID + A Sbjct: 414 SNKLKKNLKNLKPWLKQSGVECYRLYDADIPTFAVAVDIYGEHVFLQEYRADATIDQNIA 473 Query: 456 RQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLT 515 +QR + I L I + + R+RQKGK QYQK ++ F + E+NA +VN Sbjct: 474 KQRFYQAIYQIHKTLDIQYENIHTRVRQRQKGKEQYQKNNDRNNFHVINEFNAKFYVNFD 533 Query: 516 DYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLE 575 DYLDTG+FLDHR R+++ + SK K LNLFSYT +A+VHA L GA+ TT+VDMS TYLE Sbjct: 534 DYLDTGIFLDHRKIRQLVAKASKNKTLLNLFSYTCTASVHAALKGAK-TTSVDMSNTYLE 592 Query: 576 WAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDH 635 W + N LN L + H IQADC++WL+ +E+FD+IF+DPPTFSNSKRM+D D+QRDH Sbjct: 593 WGKNNFELNNLDIKKHNFIQADCISWLKSNSEKFDVIFLDPPTFSNSKRMDDILDIQRDH 652 Query: 636 LALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHN 695 L+ L+ G + FSNN R F+M + +AK + I + LS+DF N+ IHN Sbjct: 653 ELLINLAMDSLKKDGVLYFSNNYRRFKMSQEIIAKFN--CENIDKVCLSRDFLSNKNIHN 710 Query: 696 CWLI 699 CW I Sbjct: 711 CWEI 714 >UniRef50_A6GF98 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=A6GF98_9DELT Length = 783 Score = 517 bits (1331), Expect = e-145, Method: Compositional matrix adjust. Identities = 308/782 (39%), Positives = 426/782 (54%), Gaps = 86/782 (10%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M L+ + RG E+LL ELE LG + + +GGV +G Y++ +WSR+ SR++ Sbjct: 3 MLELYVTAPRGAEDLLAAELEALGLAKVRARKGGVEARGTLEQAYRACLWSRVGSRVLAA 62 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDT-------IRNSQYGAMKVK 113 + LY QAI+WT GA+ A+ G I NS + A++VK Sbjct: 63 VATLDAGDGDLLYASAQAIDWTTHLRRGASLAISSGGAVVGGEGGRARIDNSHFAALRVK 122 Query: 114 DAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPI 173 DAIVD + RPNVD D PD+R+++ L +++DLSG+GLH RGYR AP+ Sbjct: 123 DAIVDQLRERWGRRPNVDLDQPDLRLHLHLVGREGKLSVDLSGEGLHRRGYRVAPVAAPL 182 Query: 174 KETLAAAIVMRSGWQP----------GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRW 223 +E LAAA+++R+GW L+DPMCGS TL IEAA +A D APGL R RW Sbjct: 183 RENLAAAVLLRAGWPSYLENTRAAGRSIGLVDPMCGSATLAIEAAWMAGDVAPGLGRDRW 242 Query: 224 GFSGWAQHDEAIWQEVKAEAQTRARKGLAEYS---SHFYGSDSDARVIQRARTNARLAGI 280 GF+GWAQ + +W+ + AEA+ R GLA + + DS+ R + R AG+ Sbjct: 243 GFTGWAQDEPELWRGLVAEAEARREAGLAALTREKARLLAYDSEPRAVAAGIDCVRAAGL 302 Query: 281 GELITFEVKDVAQLTNPLPKGPY-------GTVLSNPPYGERLDSEPALIALHSLLGRIM 333 E + E + + + P P G V+ NPP+GERL L +L++ LG + Sbjct: 303 IEHVHVERRSLPAIEAPAPSEAEAALDSWRGLVVCNPPWGERLGERRELESLYAALGARL 362 Query: 334 KNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCV---------------QKNYH 378 ++ F GW ++ + P L L L A ++ ++GP++C K+ Sbjct: 363 RDHFAGWEAAILTGDPGLGRHLGLHARRRNALQDGPIECQILRIRLDPATLERARGKDGE 422 Query: 379 VAESTPDSKPAMVAED-----YTNRLRKNLKKFEKWAR-QEGIECYRLYDADLPEYNVAV 432 + ++P + + NRL KN KK KW R + CYRLYDAD+PEY AV Sbjct: 423 TRKVGTKARPEVRERSEGGRAFANRLSKNAKKLRKWLRAHPEVSCYRLYDADIPEYAFAV 482 Query: 433 DRYAD------WVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQK 486 D Y D VQEYA P T+D AR R + +A L + +++ LK R+RQK Sbjct: 483 DLYTDDGTGGIHAHVQEYAAPNTVDEKVARSRRGEALAVIREDLDLPRDRVHLKHRQRQK 542 Query: 487 GKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLG---QMSKGKDFL 543 G+ QY+++GE G V E A LWVNL DYLDTGLFLDHR R L + GK L Sbjct: 543 GRAQYERMGESGSTFCVAEGPARLWVNLEDYLDTGLFLDHRPLRLELSGEDSPAAGKRVL 602 Query: 544 NLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT---------GR----- 589 NLF YT + +VHA LGGA+ TT+VD+SRTYL+WA RN LNGLT GR Sbjct: 603 NLFCYTAAVSVHAALGGAKHTTSVDLSRTYLDWARRNFALNGLTVHGPEEGEEGRSANDR 662 Query: 590 -----------AHRLIQADCLAWL-REANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLA 637 AH+L++AD L WL R+ + ++DLI DPP+FSNSKRM+D+ D+QRDH+ Sbjct: 663 RGGRRGGTRRAAHQLVRADVLDWLRRQGSLRWDLIICDPPSFSNSKRMDDSLDIQRDHVE 722 Query: 638 LMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCW 697 L++ LL GG ++FS NKR FR+D DGL L + E ++ +DF R +IH W Sbjct: 723 LIRRCASLLSPGGALLFSTNKRRFRLDDDGLNGLSV---EPHAHSVPRDFERRAKIHQAW 779 Query: 698 LI 699 I Sbjct: 780 WI 781 >UniRef50_B2IA87 Ribosomal RNA large subunit methyltransferase L n=19 Tax=Xanthomonadaceae RepID=RLML_XYLF2 Length = 724 Score = 496 bits (1278), Expect = e-139, Method: Compositional matrix adjust. Identities = 312/737 (42%), Positives = 424/737 (57%), Gaps = 58/737 (7%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 F S A+GLE LL E+ LGA GV+ +G + ++WSRLASR++ PL Sbjct: 3 FFVSCAKGLEYLLVDEVLALGAAGATATVAGVNVEGGLCDAQRLVLWSRLASRVLWPLAA 62 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAV--HFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 + LY GV A+ W E PG T AV H SG + I +++Y A +VKDA+VD Sbjct: 63 FACADEDALYAGVAALPWVEHVLPGQTLAVDAHVSG--EAITHARYAAQRVKDAVVDTLR 120 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 + RP+VD + PD+R+N+ L K A++++DL G LH RG+R A +KE LAAA+ Sbjct: 121 DAGVVRPSVDVEHPDVRLNLSLRKGRATLSVDLGGRALHHRGWRQAPHAASLKEHLAAAV 180 Query: 182 VMRSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHR----------------- 220 ++R+GW G LLDPMCGSGTLLIE A++ D APGL R Sbjct: 181 LLRAGWAKVYAEGGGLLDPMCGSGTLLIEGALMVADVAPGLSRYADPDAMSHVSVAERPV 240 Query: 221 ---GRW-GFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNAR 276 RW GF D W+ + +AQ RAR+GLAE +GSD D R + A NAR Sbjct: 241 LLPSRWRGF------DVVAWEALVVDAQQRARRGLAELRPVLHGSDIDPRALGAAFANAR 294 Query: 277 LAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQ 336 AG+ + I F V + L P P+G V+ N PY RL ++P L + LG ++ Sbjct: 295 AAGVQDAIEFVVAGIDVL--PAVSEPHGVVVCNAPYDVRLAADPGL---YRHLGDALRRV 349 Query: 337 FGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYT 396 W +L S L LRADK+Y+ NG L+CV P ++ A A+ + Sbjct: 350 VPRWRAALVCGSSTLAFATGLRADKKYQFFNGALECVL--IVCDPVVPLAREAGGAQALS 407 Query: 397 -------NRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD-------WVVVQ 442 NRLRKN+++ +KW + G+ECYR+YDADLPEY A+D Y + ++ VQ Sbjct: 408 EGAQMAANRLRKNVQRLKKWRIRAGVECYRVYDADLPEYAAAIDVYQEVDGARRLFLHVQ 467 Query: 443 EYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLE 502 EYA P +I R+R +++AA +V ++ ++ LKTR+R KG +QY ++GEF Sbjct: 468 EYAAPASIPEGDVRRRRHELLAAVRAVFDVSVAQVALKTRQRGKGGSQYGCFAQRGEFFH 527 Query: 503 VTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGAR 562 V E+ A L VNL DYLDTGLFLDHR R + + + GK FLN+F YTG A+V A + GA Sbjct: 528 VCEHGALLRVNLFDYLDTGLFLDHRPLRGRMAREAVGKRFLNVFCYTGVASVEAAVAGAA 587 Query: 563 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNS 622 +TT+VD+S TYL W N LNG G HRL+QAD LAWL Q+D+IF DPPTFSNS Sbjct: 588 ATTSVDLSSTYLHWCTDNFALNGQGGVRHRLVQADALAWLEAERGQYDVIFCDPPTFSNS 647 Query: 623 KRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKT 682 R +D FDVQRDH+ L++ L GG + FSNN R FR+D+D +A + +EI+ T Sbjct: 648 ARADD-FDVQRDHVRLLRAAVARLTPGGVLYFSNNFRRFRLDVDAVAAFA-QCEEISPVT 705 Query: 683 LSQDFARNRQIHNCWLI 699 + DF+RN +IH WL+ Sbjct: 706 IDLDFSRNTRIHRTWLL 722 >UniRef50_C8WGP0 THUMP domain protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WGP0_EGGLE Length = 768 Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust. Identities = 295/768 (38%), Positives = 416/768 (54%), Gaps = 83/768 (10%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 LFAS GLE L EL+ LG + + GGV F D R + +WSRLASRI++ +G Sbjct: 8 LFASCLSGLEAPLAEELKRLGIKRVRPLGGGVAFFCDVRHALSACLWSRLASRILVVVGR 67 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 LY GV+ I W + PGA+ +V G+ND +RN+++ A+KVKDA+ D Sbjct: 68 VNAGDANLLYEGVRRIAWEGVIVPGASMSVQAHGMNDELRNTRFTALKVKDAVCDRLREM 127 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGY--RDRAGIAPIKETLAAAI 181 RP+VD D D+ V+V + + A+I+LDLSG+ L+ R Y D AP+ LAA + Sbjct: 128 RGERPDVDADHADVSVDVRVREGRATISLDLSGESLYHRSYLTPDDGPDAPLSCALAAGL 187 Query: 182 VMRSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 + +GW+ G L+DP CG G L++EAA A D APGL R RWGF GW D +W Sbjct: 188 LALAGWRTRGSRGEALVDPACGDGFLVVEAASAACDLAPGLTRERWGFFGWVPSDPDVWN 247 Query: 238 EVKAEAQTRARKGLAEYSS-----------------HFYGSDSDARVIQRARTNARLAGI 280 E+ EA R +GLA ++ F G+ + + I RAR +A+ AG+ Sbjct: 248 ELIDEADERFERGLASATAPGALDGPASAPPDPAHVRFAGASTSSPAIARARVHAKRAGL 307 Query: 281 GELITFEVKDVAQLTNPLPK------------GPYGTVLSNPPYGERLDSE--------- 319 + ++ E+ D + + + TV S P GER S+ Sbjct: 308 RQAVSIELADAQSVDELVSRVCAAAGRERGGEAASCTVASVLPTGERAQSDARSQADAAA 367 Query: 320 --------PALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLD 371 PA G I++ +FG D + L DK P++ Sbjct: 368 FVRAASVAPAGSTFAVAGGEIVEARFGVAPAVRAVLGRDRVETEALVFDKP------PME 421 Query: 372 CVQ--------KNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDA 423 V+ HV E + +E + RLRK K+ KWAR+EG+ CYR+YDA Sbjct: 422 AVKVVVPDPAGGAEHVVEVLEPT-----SEQFAARLRKTAKERRKWARREGVSCYRVYDA 476 Query: 424 DLPEYNVAVDRYAD--------WVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPN 475 DLP+Y VA+D Y ++ + EYA P TID KA++R D++A VLG+ P+ Sbjct: 477 DLPDYAVAIDVYPGAGDAEGNLYLHIAEYAAPSTIDPGKAQRRYDDVLALAPVVLGVRPD 536 Query: 476 KLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQ 535 + K R R KG +QY+ G + +V E V+L YLDTGLFLDHR+ R ++G+ Sbjct: 537 HVFSKVRRRDKGGSQYRDSGRRSYVTQVREDGYLFEVDLAGYLDTGLFLDHRLTRELVGK 596 Query: 536 MSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQ 595 ++GK FLNLF+YTGSA+VHA GGA+ST TVD+S+TYL+WA RN+ NG G H + Sbjct: 597 KAEGKRFLNLFAYTGSASVHAAGGGAKSTATVDLSQTYLDWAARNMAANGFEGEQHTFER 656 Query: 596 ADCLAWLREA---NEQFDLIFIDPPTFSNSKRM-EDAFDVQRDHLALMKDLKRLLRAGGT 651 D +AW+ EA +FDL+F+DPPTFSNSK M + +DVQRDH+ L+ + RLL G Sbjct: 657 GDTMAWVTEARRTGRRFDLVFVDPPTFSNSKAMGKRTWDVQRDHVELLIGVSRLLSEEGE 716 Query: 652 IMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 +FS N R F+ D + LAK G+ ++IT +T+ DF RN +IH C+L+ Sbjct: 717 AVFSCNLRSFKPDEEALAKYGVTLEDITAQTIPHDFERNPRIHKCYLV 764 >UniRef50_Q1QCP8 Ribosomal RNA large subunit methyltransferase L n=3 Tax=Moraxellaceae RepID=RLML_PSYCK Length = 776 Score = 473 bits (1218), Expect = e-132, Method: Compositional matrix adjust. Identities = 276/744 (37%), Positives = 406/744 (54%), Gaps = 50/744 (6%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 L + A GLE L+TEL + G G + G R +Y+ +WSR+ASR+++ + Sbjct: 29 LIITCADGLEAPLQTELTSFGIASEIKSTGRLAVTGTLRDLYKICLWSRVASRVLMLIKR 88 Query: 64 CKVYSDLD----LYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDA 119 + ++ D LY +++NWTE F+ TFA+ S + Q+ +++KDAI D Sbjct: 89 KNINAEYDVAEQLYGLAKSVNWTEQFSLEQTFAIRLSVDKRVAVSQQFAMLRIKDAIADT 148 Query: 120 FTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAA 179 F RPNVD PD V ++ + A + LDLSG LH RGYR AP+KE LAA Sbjct: 149 FNEVYESRPNVDSKNPDFSVFATVNDKQAELYLDLSGTSLHRRGYRVAMTEAPLKENLAA 208 Query: 180 AIVMRSGWQP-----GTP----LLDPMCGSGTLLIEAAMLATDRAPGLHRG--RWGFSGW 228 A++ +GW TP L+DPMCGSGT +IEA ++ D A G+ + ++GF W Sbjct: 209 ALLYSAGWHKKNEAGDTPFYNALIDPMCGSGTFIIEALLMHCDYAVGIDKAANQFGFYEW 268 Query: 229 AQHDEAIWQEVKAEAQTRARKGLAEYSSH------FYGSDSDARVIQRARTNARLAGIGE 282 HD A+WQE+ +AQTR R L + +G D+D I N AG+ + Sbjct: 269 QHHDAALWQEMIDDAQTRFRAALEIANEQPDTLPLIFGFDADNGAIIATEKNLIAAGLQD 328 Query: 283 LITF---EVKDVAQLTNPL-PKGPYG-----TVLSNPPYGERLDSEPALIALHSLLGRIM 333 L+ E + + QL+ L P G +++NPPYGERL E + L+ +G I+ Sbjct: 329 LLPLLDIETRALDQLSTLLKPLVADGRLSNPLIITNPPYGERLGDEEMIKPLYQSIGLIL 388 Query: 334 KNQFGGWN----LSLFSASPDLLSCLQLRADKQYKAKNGPLDCV---------QKNYHVA 380 ++ F G L + ++ + + L +R K + NG + Q V+ Sbjct: 389 QDSFAGSGIDPMLGILASHVEQVDILPIREPKTLRCHNGAITVYFRYGTLIAGQTGNLVS 448 Query: 381 ESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVV 440 +D+ NRL+KNL + +K A+++ + R+Y+ADLP++ VA+D Y D+ Sbjct: 449 RFEKREIEVEDGQDFINRLQKNLTRLKKLAKKDNVSNIRVYNADLPDFKVAIDLYGDYAH 508 Query: 441 VQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLG---EK 497 VQEYAPPKTI A++R + V GI ++ +KTR RQ G +QY K G ++ Sbjct: 509 VQEYAPPKTIPPETAKKRFNLALMGIREVFGINREQIFIKTRARQSGNDQYSKQGNTEKR 568 Query: 498 GEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAG 557 G+F E A+L+VN TDYLDTGLF+DHR R + S+ K LNLF+YT +A+VHA Sbjct: 569 GKFYIAREDGAYLYVNFTDYLDTGLFIDHRNMRARIKDNSRNKSVLNLFAYTCTASVHAA 628 Query: 558 LGGARSTTTVDMSRTYLEWAERNLRLNGL--TGRAHRLIQADCLAWLREANEQFDLIFID 615 L GA+ T+VD+S+ YL+W ++N LNGL + ++ + AD W+++ EQFD+IFID Sbjct: 629 LAGAKKVTSVDLSQNYLDWGKQNFALNGLNVSSNKYQFVAADIFEWIKDNTEQFDIIFID 688 Query: 616 PPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKA 675 PPTFSNSK+ + FDVQRDH AL+ L A G + FSNN F +D + + Sbjct: 689 PPTFSNSKKFQGTFDVQRDHAALINRAMNRLTADGILYFSNNFTRFELDEQLTERYDII- 747 Query: 676 QEITQKTLSQDFARNRQIHNCWLI 699 +ITQKT+ DF + IH + I Sbjct: 748 -DITQKTIGFDFDIKKPIHQSFEI 770 >UniRef50_Q0VQU5 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Alcanivorax RepID=RLML_ALCBS Length = 704 Score = 448 bits (1153), Expect = e-124, Method: Compositional matrix adjust. Identities = 276/710 (38%), Positives = 398/710 (56%), Gaps = 28/710 (3%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 A+ GL +LL EL +LG + + V F G + +WSRL+ R++L L Sbjct: 3 FVATCMPGLADLLSDELGSLGISVTETGRAHVSFSGGVADALKVCLWSRLSERVLLHLAT 62 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 V D+ + +W + A +H + +++ A + A+ + F Sbjct: 63 LGVTPDIAPEKLAASQDWLSLVGNNAPVHLHIEHGAEVRGDNRISAKRFIHALPEQFAIS 122 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 P+ + IR + L++ A + LDL+G+ LH RGYR G AP++ETLAAAI+ Sbjct: 123 REPKGSCC-----IRARLDLNE--AHLWLDLAGEPLHRRGYRLAGGRAPLRETLAAAILW 175 Query: 184 RSGWQP---GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 GW + L+DP CGSGTL+IEAA++A RA G R +GF W +W + + Sbjct: 176 AVGWGKEGRHSALIDPFCGSGTLVIEAALIAAGRAAGAQRQHYGFQQWRGCRRQLWLDAQ 235 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 EA ++ + S G DS+A +Q A NA AG+ I FE +++ L Sbjct: 236 KEAGESGKRPVPAVS--LKGFDSEASTLQLALQNAERAGVRNAIHFERRELGALRR-RDF 292 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G V+ NPP+GERL+ +P LH LGRI+ + G+ L A +++ + + Sbjct: 293 VDNGIVVGNPPWGERLEEKPQAGWLHYALGRILSVRAPGYQALLLGADAEVMDRSGMNLE 352 Query: 361 KQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYT-----------NRLRKNLKKFEKW 409 +Q++ KNGP + + Y + TP + VA+D NRLRKN K +W Sbjct: 353 QQWRLKNGPFNNFIRLYSPRKQTP-ANVVKVADDSAFNVPEGAQPLLNRLRKNGKHLRRW 411 Query: 410 ARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISV 469 +E I+CYRLYD DLPE+NVAVD YAD V+VQE+ PKTID KA++R + A + Sbjct: 412 LEREDIQCYRLYDRDLPEFNVAVDIYADQVLVQEFKAPKTIDPEKAKERRDWAVTAVRAA 471 Query: 470 LGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIA 529 LG+ ++ L+TRE+QKG QYQKL +G++ V E + L +NL DYLDTGLFLDHR Sbjct: 472 LGVHREQVHLRTREKQKGNQQYQKLDAQGQYRVVREGQSQLLINLQDYLDTGLFLDHRPT 531 Query: 530 RRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGR 589 R + + + GK FLNLF+YTGSATVHA +GGA+ T TVD S+ YL+WA NL NG + Sbjct: 532 RLRIAEEASGKRFLNLFAYTGSATVHAAVGGAKRTVTVDSSKRYLDWAACNLAANGFSTD 591 Query: 590 AHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAG 649 H L +AD + WL E EQFDL+F DPPTFSN+K D F V+ H L++ + R L G Sbjct: 592 QHELARADTMRWLDECKEQFDLVFCDPPTFSNNKSRSD-FVVEEHHGDLIRKIMRCLEPG 650 Query: 650 GTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 G + FS N R F+MD + ++K ++I++ ++ +DF RN +IH C+ I Sbjct: 651 GVLYFSCNYRRFQMD-ESISKW-YAVEDISRWSIPEDFRRNEKIHYCYAI 698 >UniRef50_A5WGC0 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Moraxellaceae RepID=RLML_PSYWF Length = 807 Score = 448 bits (1152), Expect = e-124, Method: Compositional matrix adjust. Identities = 271/778 (34%), Positives = 403/778 (51%), Gaps = 84/778 (10%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 + + A GLE L+TEL ++ G + +Y+ +WSR+ASR++LP+ + Sbjct: 28 IVVTCADGLEAPLQTELSHMDISHELKSTGRIAVNATLEQIYKICLWSRVASRVLLPIKK 87 Query: 64 CKVYSDLDLYLGV----QAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDA 119 + + D+ + + ++WTE F TFA+ S + Q+ +++KDAI D Sbjct: 88 RNINKEYDVAEQLNGLARTVDWTEWFELDNTFAIRMSVDKRVQVSQQFAMLRIKDAIADT 147 Query: 120 FTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAA 179 F+ K RP+VD + PD + ++++ A I LDLSG LH RGYR AP+KE LAA Sbjct: 148 FSEKLDARPDVDSNNPDFPIYATVNEKQAEIFLDLSGTSLHRRGYRVAMTDAPLKENLAA 207 Query: 180 AIVMRSGWQPG----TPLLDPMCGSGTLLIEAAMLATDRAPGLHRG--RWGFSGWAQHDE 233 ++ GW + L+DPMCGSGT +IEA ++ D G+ + ++GF W +HD Sbjct: 208 GLLYTVGWHKTKNSYSALIDPMCGSGTFIIEALLMHCDYPVGIDKAESQFGFYNWQEHDS 267 Query: 234 AIWQEVKAEAQTRARKGLAEYSS----HFYGSDSDARVIQRARTNARLAGIGELI---TF 286 +WQ+ +AQ R GL + ++ G D+DA I+ N AG+ ELI T Sbjct: 268 ELWQQCVVQAQERFHNGLQKAAAGKLPTILGFDADAGAIKAVHKNLIAAGLIELIPHLTL 327 Query: 287 EVKDVAQLTNPLPKG------PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGW 340 E + ++QL L K V++NPPYGERL + L+ LG ++ F Sbjct: 328 EQRPLSQLKIALAKPLLDRKLKRPLVITNPPYGERLGESDFIKPLYQGLGLTLQEIFAKQ 387 Query: 341 N----LSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMV----- 391 L L +A + L + + + NG + ++ + +S Sbjct: 388 KYQPMLGLLAAHVEQADVLPIEDPQTLRCHNGAITVYFRHGQLIRKEGESLITRFEKTEI 447 Query: 392 ----AEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPP 447 A+D+ NRL+KN+ +K A +E + R+YDADLP+Y VA+D Y D+V VQE+APP Sbjct: 448 KVDEAQDFVNRLQKNVNHLKKLAAKEDVTNLRVYDADLPDYKVAIDVYGDYVHVQEWAPP 507 Query: 448 KTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQY---------------- 491 K+I AR+R + V GI ++ +KTR RQ G QY Sbjct: 508 KSIPPETARKRFNLALMGIREVFGINREQIFIKTRARQVGNTQYGNPEASAQSKESKNAP 567 Query: 492 ---------------------------QKLGEKGEFLEVT-EYNAHLWVNLTDYLDTGLF 523 Q+L +K + V E A+ +VN TDYLDTGLF Sbjct: 568 EPKKDNRNRYKGNKFQQAREEAKRQEAQRLAQKKRKMHVVQEDGAYFYVNFTDYLDTGLF 627 Query: 524 LDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRL 583 +DHR R M+ S+G D LNLF+YT +A+VHA LGGA+S T+VD+S+ YL+W ++N L Sbjct: 628 IDHRNMRSMIRSASRGADVLNLFAYTCTASVHAALGGAKSVTSVDLSQNYLDWGKQNFAL 687 Query: 584 NGL--TGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKD 641 NGL T ++ I +D W+++ +QFD+IFIDPPTFSNSK+ + FDVQRDH AL+ Sbjct: 688 NGLDVTTSRYQFIASDIFDWIKDNTDQFDVIFIDPPTFSNSKKFQGTFDVQRDHTALINR 747 Query: 642 LKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 L GG I FSNN F +D + + + EIT +T+ DF + IH+ + I Sbjct: 748 AMNRLANGGVIYFSNNFTKFELDEELYDR--YEVTEITSETIGFDFNPKKPIHHSFEI 803 >UniRef50_B9CL66 Methyltransferase n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CL66_9ACTN Length = 747 Score = 427 bits (1098), Expect = e-118, Method: Compositional matrix adjust. Identities = 274/755 (36%), Positives = 403/755 (53%), Gaps = 70/755 (9%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + FA+ +G E+LL EL L + + + G V F+G Y+ +WSRLASR++L Sbjct: 5 IQEFFATCPKGFEQLLGCELSRLSISQIRPLSGQVSFRGTLADAYRVCLWSRLASRVVLV 64 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 LG +LY GV I+W +P ATFAV+ G N +RN+ + A++VKDAIVD Sbjct: 65 LGRMSATQADELYAGVSEIDWEAHISPHATFAVNAHGTNSELRNAHFTAVRVKDAIVDQL 124 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDR----AGIAPIKET 176 K RP V+ D PD+ V V + K AS+ +DL+GD L RG R +AP++ Sbjct: 125 IAKRGSRPMVNTDFPDVTVTVRITKTHASLGIDLAGDPLFKRGIISRRTLTQNLAPLRPD 184 Query: 177 LAAAIVM--------RSGWQPGTPLLDP------------MCGSGTLLIEAAMLATDRAP 216 AAA++ RS G L P G+G+L+ E + +D AP Sbjct: 185 YAAALLAAHGIYGGNRSEKHGGKSLETPAYEAAAATPSILFSGAGSLVHELVGIRSDCAP 244 Query: 217 GLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNAR 276 GL R RWG GW HD +W E+ EA RA E + SD+ + AR + R Sbjct: 245 GLLRTRWGMLGWVGHDSKVWSELIDEATYRANA--CEKNLEVCISDTRPKADVAARHSLR 302 Query: 277 LAGIGELITF-EVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSE-PALIALHSLLGR--- 331 +G+ + F K++A+ T G V +G L + AL AL +G Sbjct: 303 ASGLSASLRFLSPKELAEHTTD-----GGIVADMSWFGHNLAVQGSALSALAHFVGTKAT 357 Query: 332 -IMKNQFGGWNLSLFSAS-PDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAES-TPDSK- 387 + ++ L S+S ++L + Y A KN+ + + T +K Sbjct: 358 VLSLDETSDTTLGQQSSSVTNVLVGKTPAGIRTYAAT--------KNFELPPTVTVRAKQ 409 Query: 388 -PAMV--AEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD------W 438 P +V ++ ++ RL K K +WA++E I CYR+YDADLP+Y V++D Y W Sbjct: 410 LPVLVGASDQFSARLTKVAKLRARWAKREDISCYRIYDADLPDYAVSIDLYQGCTSSKRW 469 Query: 439 VVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKG 498 + + EYA P IDA A++RL D++ VL + P+ + L+ R R KG +QY GE Sbjct: 470 LQISEYAAPHDIDATLAKKRLLDVLTIAPEVLEVPPHHVNLRIRTRAKGGSQYVSEGEAP 529 Query: 499 EF-----LEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSK----GKDFLNLFSYT 549 + L + E V+ + +LD G+FLDHR R M+ +M K K FLNLF+YT Sbjct: 530 TYAHKQTLLIDEGGLTFEVDFSQHLDCGIFLDHRQTRAMIREMMKTAGTAKSFLNLFAYT 589 Query: 550 GSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL---REAN 606 G+AT +A GGA TTTVD+S+ LEWA RN+ NG G+ H +QAD L W+ R + Sbjct: 590 GTATCYAADGGALHTTTVDLSKPSLEWARRNMCQNGFDGQEHEFVQADALTWITEQRRSK 649 Query: 607 EQFDLIFIDPPTFSNSKRMEDA-FDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL 665 ++++IF D PTFSNS RM+ A FDVQRDH L+ + RLL GG +FS N R F+ D+ Sbjct: 650 NRWNVIFCDVPTFSNSSRMKKASFDVQRDHAELIIGISRLLTRGGVALFSCNLRSFKPDV 709 Query: 666 DGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLIT 700 + + + G+ ++IT++T+ +DFARN++IH+C+ +T Sbjct: 710 EKIERAGVSLEDITKETIPEDFARNQKIHHCYRVT 744 >UniRef50_D0KZE4 Putative RNA methylase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZE4_HALNC Length = 751 Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust. Identities = 271/732 (37%), Positives = 382/732 (52%), Gaps = 61/732 (8%) Query: 8 TARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVY 67 +A ++ L E+ +L + GV Y+ + S +A + L L + Sbjct: 17 SAPDMQAPLAEEIRSLVDAKVSDRPFGVLLDATPEQAYRIVCDSLIAGHVYLTLITGQAA 76 Query: 68 SDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPR 127 + +LY VQ I+W E F + +G D +R++ + A ++KDAIVD F + R Sbjct: 77 TADELYRLVQQIDWAEHLAAEGYFTISATGSTDALRHTGFVATRIKDAIVDQFRERTGTR 136 Query: 128 PNVDRDAPDIRVNVWLHKE-TASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSG 186 P +D + PDIR++ L +++L+LS LH RGYR G+AP++ETLAA ++ R+ Sbjct: 137 PTIDSEQPDIRLHCHLTASGHTTLSLELSNGSLHRRGYRTDGGLAPLRETLAAGMLWRAR 196 Query: 187 W--------QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 W + G L DPMCGSGTLLIEAA+ T L R G +GW H E + Sbjct: 197 WPQLVASETETGAALFDPMCGSGTLLIEAALRLTGLPQDLRVKRIGSTGWLGHREQAQKR 256 Query: 239 VKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP- 297 V A KG+ + + G D D I AR NA AG+ L+ F D + P Sbjct: 257 VLDNPPELA-KGVDKLT--LIGQDIDIEQITAARANAERAGVDHLMVFREADAWKAPCPP 313 Query: 298 -LPKGPYGTVLSNPPYGERLD------SEPALIALHSLLGRIMKNQFGGWNLS------- 343 +G V+SN PYG RLD EP AL R F GW+ + Sbjct: 314 EFEGKSHGLVVSNLPYGHRLDVGGDHEGEPDWSALTDQWQRC----FNGWHWAFLLPEGE 369 Query: 344 ----------LFSASPDLLSCLQLRADKQYKAKN---GPLDCVQKNYHVAESTPDSKPAM 390 +F ++ +R KA+ GP+ + AE ++ + Sbjct: 370 GQNWPLRYERVFPMDQSGIAIDMIRGSFDGKARREAPGPIGLANRLCAAAEQ---ARALV 426 Query: 391 VAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD-----WVVVQEYA 445 A + NRL+KN + +K A +EG C+R+YDADLP++N AVD Y D W +QEY Sbjct: 427 DAAPFANRLQKNYRHLKKLAEREGWCCFRVYDADLPDFNCAVDLYRDEAGETWADIQEYR 486 Query: 446 PPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTE 505 P ID AR RL I+ + L +A N V++ R+RQ G QYQK+ ++ V E Sbjct: 487 APNKIDPQLARARLSIIVEQVMENLSLAENHSVVRQRKRQTGTEQYQKITQERLERVVHE 546 Query: 506 YNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTT 565 + LWVNLTDYLDTGLFLDHR+ R + ++S+GK LNLF YT +A+V A GA T Sbjct: 547 GSTRLWVNLTDYLDTGLFLDHRLVRDRVAELSRGKKLLNLFCYTATASVRAAHQGASRTV 606 Query: 566 TVDMSRTYLEWAERNLRLNGL-TGRAHRLIQADCLAWLREAN------EQFDLIFIDPPT 618 ++D+S TYL+WAERN LN L G H LI+AD L WL + + E+FD+IF DPPT Sbjct: 607 SIDLSNTYLDWAERNFTLNNLKVGTEHSLIRADVLDWLEQRSNAIYQPERFDVIFCDPPT 666 Query: 619 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEI 678 FSNSK M+D D+QRDH L++ LL GT++FSNN +GF + L + + ++ Sbjct: 667 FSNSKAMQDTLDIQRDHEFLVRSCMHLLSDDGTLIFSNNLKGFTLSSKLLDE--FRINDL 724 Query: 679 TQKTLSQDFARN 690 ++KTL DFAR Sbjct: 725 SRKTLPGDFART 736 >UniRef50_C7N0P8 Predicted N6-adenine-specific DNA methylase n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N0P8_SLAHD Length = 729 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 254/728 (34%), Positives = 384/728 (52%), Gaps = 43/728 (5%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 FA A G E+ L EL + + + GGV F G ++ + SR+A+R+ L LG Sbjct: 10 FFARCASGFEDQLAAELTQIRCRRVRPLHGGVAFFGAYEDGLRACLHSRVATRVQLVLGR 69 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 + LY GV+A+ W + PGAT A+ +G N +RN+Q+ A+KVKDA+ D + Sbjct: 70 VSARNADALYDGVRALPWETLVAPGATIAMRATGQNSNLRNTQFTALKVKDAVCDRLAAE 129 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGI---APIKETLAAA 180 RP+VD PD V++ LH++ A+I+L+L+G LH RGYR+ G+ AP+KETLAA Sbjct: 130 RGARPDVDGSDPDFSVDILLHRDKATISLNLAGPVLHKRGYRE-PGVQTEAPLKETLAAG 188 Query: 181 IVMRSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 +++ +GW G DPMCGSGTL IEAA++AT APGL R RWGF+ + HD A W Sbjct: 189 MLLAAGWDSMVADGMGFADPMCGSGTLAIEAALIATRAAPGLLRNRWGFTAYMPHDPAAW 248 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 + + AEA+ AR E D + + AR NA AG+ ELI F V D A L Sbjct: 249 ERLVAEAEA-ARVPAWESGVRILAGDMNEEAVAVARANAERAGVAELIEFYVDDAANLGT 307 Query: 297 PLPKG---PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLS 353 L +G G V NPPYG RL S L +++ L GGW L++ S + + Sbjct: 308 HLKRGRRLSGGLVACNPPYGHRLLSGEDLSQVYAALDSATAKLGGGWQLAIISPDEGVDT 367 Query: 354 CLQLRADKQYKAKNGPLDCVQKNYHVAESTPD-SKPAM------------VAEDYTNRLR 400 L ++ NGPLD + Y + ++ S P++ +E + R R Sbjct: 368 GLGRMPERSIACHNGPLDTSLRIYDLGKAAARLSIPSLSGSDSVVPVAEGASEQFAARFR 427 Query: 401 KNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD------WVVVQEYAPPKTIDAHK 454 K K+ KWAR+ G+ YR+YDADLPEY +VD + V V+E+ +DA + Sbjct: 428 KVAKERAKWARKAGVHSYRVYDADLPEYAFSVDVFRSAEDDGLLVRVEEHRAGSNVDADR 487 Query: 455 ARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNL 514 A +R+FD +A +VL + ++ K ++K + + + +++V E + +++ Sbjct: 488 ANRRVFDGLAIVSAVLDVPRERVFCKRARQEKSRPAAEPV-----WVDVRESDFVFDMDI 542 Query: 515 TDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYL 574 + GL LD R R +L + K F L ++ G+ +V+A GGA ST TVD + +L Sbjct: 543 ASQRECGLPLDMRPVRELLRAHAASKRFACLLAHGGAPSVYAAAGGAVSTVTVDPADPFL 602 Query: 575 EWAERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAFDV 631 E A+ L +NG GR H L+ D L W R A +DL+F D F +S+ + D+ Sbjct: 603 EQADHALYVNGFRGREHDLVCDDPLDWARREARAGRTYDLVFCDLSAFPSSR----SHDL 658 Query: 632 QRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNR 691 DH+++++ + R+L G ++ + + R F + GL AQ+IT T+ DF R Sbjct: 659 IADHMSVIQQIVRILSPEGKLVLTCHDRRFNLSDKAFGGHGLTAQDITADTIGHDFTRTP 718 Query: 692 QIHNCWLI 699 +IH +LI Sbjct: 719 KIHRAFLI 726 >UniRef50_C8W7K3 THUMP domain protein n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W7K3_ATOPD Length = 760 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 268/766 (34%), Positives = 403/766 (52%), Gaps = 88/766 (11%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 FA+ +G E+LL ELE+L + + + G V F G Y+ +WSRLASR++L L Sbjct: 7 FFATCPKGFEKLLSQELESLHIKKVRPLGGQVAFYGLLADAYRVCLWSRLASRVILVLDR 66 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 + + LY + + W + P AT AV+ G ND +RN+ + A++ KDAIVD K Sbjct: 67 IEAATSDTLYEELSHLAWEDHIGPRATIAVNAHGTNDQLRNTNFIAVRTKDAIVDRLAAK 126 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAG----IAPIKETLAA 179 RP V+ APD+ + V + + A++ +DL+G+ L R G AP++ AA Sbjct: 127 RGSRPMVNTLAPDVTIVVRISRNRATVGIDLAGEALFKRSLTGGRGPAREFAPLRLDYAA 186 Query: 180 AIVM--------RSGWQPGT---PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGW 228 A++ SG+ P LL P G+G L EAA +A D APG+ R RWG +GW Sbjct: 187 ALLYLQAQTATSASGFSPDALLPALLFP--GAGALAQEAAGMALDVAPGILRARWGMTGW 244 Query: 229 AQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDAR----VIQRARTNARLAGIGELI 284 A H++ +WQ++ AEA RA KG E Y +DS + V+ R + A + L Sbjct: 245 AGHNDDVWQDLLAEADERAEKG-QERQITLYAADSRPKAKEAVLYTLRAGSLKADVQFLA 303 Query: 285 TFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALI-ALHSLLGRIMKNQFGGWNLS 343 E+ A+ + V+++ + + EP L + ++ LG F G + Sbjct: 304 ASELLKHAE--------HFTGVVADLSWTKE---EPTLQGSAYATLG-----LFAGQAST 347 Query: 344 LFSASPDLLSCLQ--------------LRADKQYKAKNGP-LDCVQKNYHVAESTPDSKP 388 L ++ + + L+ + + Y A N D N V+ S P S P Sbjct: 348 LLTSDTNTDTVLRATPTQTLSVYVGNSIATIRSYPAANAEGADSSATNAPVSSSKPTSVP 407 Query: 389 A----MV-----------AEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVD 433 A MV ++ + RL K K+ KWAR+ + CYR+YDADLP+Y V++D Sbjct: 408 AGPTVMVNNQPVSVLVPASDQFAARLTKVAKQRAKWARKNDVSCYRVYDADLPDYAVSID 467 Query: 434 RY------ADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKG 487 Y W+ + EYA K ID A++RL D++A +LG+ + + L+TR R KG Sbjct: 468 IYKGATKPTTWLQISEYAASKEIDPDLAKRRLLDVLALAPRILGVPSSNVNLRTRTRAKG 527 Query: 488 KNQYQKLGE-----KGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSK---- 538 +QY G + E L + E VN LD G+FLDHR R + ++ K Sbjct: 528 GSQYSNEGSATDNSRKEMLLIDEGGLLFEVNFASRLDCGIFLDHRDTRAEIRELMKRAGT 587 Query: 539 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADC 598 K FLNLF+YTG+AT +A G A TTTVD+S+ LEWA+RN++ NG G H +QAD Sbjct: 588 AKSFLNLFAYTGTATCYAADGDALHTTTVDLSKPSLEWAKRNMKRNGFGGEDHEFVQADV 647 Query: 599 LAW---LREANEQFDLIFIDPPTFSNSKRM-EDAFDVQRDHLALMKDLKRLLRAGGTIMF 654 L+W +R ++++IF D PTFSNS RM + +FDVQRDH L+ + RLL GG +F Sbjct: 648 LSWITEMRHTKNRWNVIFCDVPTFSNSSRMKQSSFDVQRDHAELIIGISRLLTHGGVAIF 707 Query: 655 SNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLIT 700 S N R F+ D++ + + G+ ++IT KT+ +DF+RN++IH+ + I+ Sbjct: 708 SCNLRTFKPDVEKIERAGVVIEDITSKTIPEDFSRNQKIHHAYKIS 753 >UniRef50_A4EBB5 Putative uncharacterized protein n=4 Tax=Bacteria RepID=A4EBB5_9ACTN Length = 852 Score = 295 bits (755), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 152/343 (44%), Positives = 214/343 (62%), Gaps = 28/343 (8%) Query: 385 DSKPAMV----AEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRY----- 435 D KP V +E + NRLRKN + KWA++EG+ CYR+YDADLP+Y+ A+D Y Sbjct: 436 DGKPLPVLIPESEQFANRLRKNARLRRKWAKREGVSCYRVYDADLPDYSAAIDLYEGCPQ 495 Query: 436 --ADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQK 493 W+V+ EYA PKTID A+ R+ DI+A +L + + K R R +G +QY K Sbjct: 496 TPGRWLVIAEYAAPKTIDPALAQARMLDILAIAPRILDVPAEHVHAKARMRSRGGSQYGK 555 Query: 494 LGE-KGEFLE-----------VTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSK-GK 540 G KG E + E VN DYLD G+FLDHR+ R ++ + +K + Sbjct: 556 QGAGKGASGERANIARRRLPLIEEGGLTFAVNFDDYLDVGIFLDHRVTRNLVREHAKQAR 615 Query: 541 DFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA 600 FLNLF+YTG+AT +A GG T TVD+S TYL WAERN+R NG G H ++ D LA Sbjct: 616 RFLNLFAYTGTATCYAADGGVEETVTVDLSNTYLNWAERNMRQNGFVGPQHHFVRDDVLA 675 Query: 601 WLREANE---QFDLIFIDPPTFSNSKRM-EDAFDVQRDHLALMKDLKRLLRAGGTIMFSN 656 W+R+ + ++DLIF+DPPTFSNS +M +DVQRDH+ L+ + RLL GG +FS Sbjct: 676 WIRDQRQTRNRWDLIFVDPPTFSNSSKMGRRTWDVQRDHVELLAGVSRLLAQGGHAIFSC 735 Query: 657 NKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 N RGFR + LA+ G+ ++IT +T+ +DFARN+++H+C+++ Sbjct: 736 NLRGFRPETRKLARAGVVLEDITAQTIPEDFARNQKVHHCYIV 778 Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 99/302 (32%), Positives = 147/302 (48%), Gaps = 20/302 (6%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 +AS G E L EL+ LG + ++G F+G+ Y++ +WSRLASR+ + LG Sbjct: 3 FYASCPEGFEPALADELKRLGLSHVRRLKGRATFEGELEEGYRACLWSRLASRVFVVLGR 62 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 + LY GV I W + PGAT A+ G+ + +RN+++ A++ KDA+ D Sbjct: 63 FEAQDADGLYDGVYDIAWETIIRPGATIAITARGVTEQLRNTRFSALRAKDALCDRLAET 122 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLR----GYRDRAGIAPIKETLAA 179 R +VD PD+ + + L + ASI+L LSGD L R R G ++ AA Sbjct: 123 TGRRADVDAADPDVHLLLSLRQRRASISLGLSGDPLFKRLPPAATRAGEGAHVLRPDYAA 182 Query: 180 AIVMRSGW---------------QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWG 224 ++ + GW + L+D C G LL+EA + TDRAPG R RWG Sbjct: 183 LVLAQVGWTTLCERELTADDYENEALPTLVDASCAGGGLLLEAVNILTDRAPGAARERWG 242 Query: 225 FSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELI 284 F GW HD A+W+++ AEA+ R E + D D + A + AG + Sbjct: 243 FEGWQLHDAALWEQLLAEARER-ETAARERQARIVAVDIDPAARKTAERMVKCAGYKRFV 301 Query: 285 TF 286 F Sbjct: 302 DF 303 >UniRef50_C7N3A2 Predicted SAM-dependent methyltransferase n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N3A2_SLAHD Length = 657 Score = 281 bits (720), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 145/322 (45%), Positives = 205/322 (63%), Gaps = 13/322 (4%) Query: 392 AEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRY--------ADWVVVQE 443 A+ + RL+K K+ KWA I CYR+YDADLP+++VA+DRY ++V+ E Sbjct: 313 ADQFAARLKKVAKERRKWAEDNQICCYRVYDADLPDFSVAIDRYDGVWKNEGESYLVIAE 372 Query: 444 YAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEV 503 Y PK + KA R D++ V+G+ + + KTR +KG QY + + Sbjct: 373 YQAPKEVSEEKAAARFADVMTLAPVVMGVPADHVFAKTRRHEKGGGQYTDQQKDSCVVYT 432 Query: 504 TEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARS 563 E V+L YLDTG+FLDHRI R ++G++++G +FLNLF+YTG+ATVHA LGGA + Sbjct: 433 DESGCIFEVDLGGYLDTGIFLDHRITRELVGRLAQGTNFLNLFAYTGTATVHAALGGALT 492 Query: 564 TTTVDMSRTYLEWAERNLRLNGLTGRA-HRLIQADCLAWL-RE--ANEQFDLIFIDPPTF 619 TTTVDMSRTYL WAERN+ LN ++ HR ++ D L W+ RE ++DLIF+DPPTF Sbjct: 493 TTTVDMSRTYLGWAERNMELNNISDPTRHRFVRYDALRWIEREIGTGNRYDLIFVDPPTF 552 Query: 620 SNSKRMED-AFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEI 678 SNSK M D + VQRDH+ L+ + LL GG +FS N R F D++ LAK G+ ++I Sbjct: 553 SNSKSMGDTTWSVQRDHVNLLIGVAALLTPGGKAIFSCNLRNFTPDVEALAKEGIVLKDI 612 Query: 679 TQKTLSQDFARNRQIHNCWLIT 700 T +T+ DF RN +IH C++++ Sbjct: 613 TAQTIPHDFERNPRIHKCYVVS 634 >UniRef50_C4FAV8 Putative uncharacterized protein (Fragment) n=2 Tax=Collinsella RepID=C4FAV8_9ACTN Length = 606 Score = 278 bits (711), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 185/572 (32%), Positives = 274/572 (47%), Gaps = 111/572 (19%) Query: 231 HDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKD 290 HD A W+E+ EA RA + +D + AR + AG+ + + F D Sbjct: 1 HDAATWRELLNEADRRAELAKGRVA-RIVATDPSGDAVACARRILKAAGLADRVIFAQPD 59 Query: 291 VAQLTNPLPKG------PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNL-- 342 + +++ L P G V + +E A+ + +L G Sbjct: 60 LDKISRKLMMSACCGGEPRGFVFLD-------TTETAISKMSRVLDLATSLHAGACGADP 112 Query: 343 --SLFSASP-------DLL--------SCLQLRADKQ------YKAKNGPLDCVQKNYHV 379 ++ S P DLL L++ + + + A NG + + N Sbjct: 113 VRAMLSTMPTVALTRDDLLIRALGEPARSLRVMPNNEEAELAVFSAANGAISAGEGNVAA 172 Query: 380 AESTP---------------------DSKPAMV----AEDYTNRLRKNLKKFEKWARQEG 414 +S P D KP V +E + RLRK K KWA++EG Sbjct: 173 EDSMPAEDAIESSVAPSPATTLIDLGDGKPCAVLIPESEQFARRLRKVAKLRRKWAQREG 232 Query: 415 IECYRLYDADLPEYNVAVDRY-------ADWVVVQEYAPPKTIDAHKARQRLFDIIAATI 467 + CYR+YDADLP+Y+ A+D Y W+V+ EYA P+ +D A RL DI+ Sbjct: 233 VTCYRVYDADLPDYSAAIDLYEGSATTPGRWLVIAEYAAPREVDPALAEARLLDILTLAP 292 Query: 468 SVLGIAPNKLVLKTRERQKGKNQYQKL-------------GEKG---------------- 498 +L + P+ + K R R +G +QY K G +G Sbjct: 293 RILQVDPDNVFAKARIRSRGGSQYGKQAGGPNPGKGGKPRGTRGGSASNRPSQGASSGTP 352 Query: 499 ------EFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDF-LNLFSYTGS 551 + E VN DYLDTG+FLDHRI R ++ + ++GK F LNLF+YTG+ Sbjct: 353 SDIRTRRLPLIEEGGLTFAVNFNDYLDTGIFLDHRITRGLVREHARGKRFFLNLFAYTGT 412 Query: 552 ATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANE---Q 608 AT +A G T TVD+S TYL+WAERN+ NG G H ++AD ++W+R+ + + Sbjct: 413 ATCYAADAGVEETVTVDLSNTYLDWAERNMEQNGFVGPDHHYVRADVMSWIRDMRQTRNR 472 Query: 609 FDLIFIDPPTFSNSKRM-EDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDG 667 +DLIF DPPTFSNS +M +DVQRDH+ L+ L RLL G +FS N R FR D++ Sbjct: 473 WDLIFCDPPTFSNSSKMGRRTWDVQRDHVELLVGLSRLLSREGEAIFSCNLRTFRPDIEE 532 Query: 668 LAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 LA+ G+ +IT +T+ +DFARN++IH+C+L+ Sbjct: 533 LARAGVVLTDITDETIPEDFARNKKIHHCYLV 564 >UniRef50_Q1DAR2 Putative uncharacterized protein n=2 Tax=Cystobacterineae RepID=Q1DAR2_MYXXD Length = 342 Score = 267 bits (683), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 140/311 (45%), Positives = 201/311 (64%), Gaps = 7/311 (2%) Query: 395 YTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHK 454 + NRLRK K+F KWAR +G+ +R+YD D+PEY A+D Y D V V EY + I + Sbjct: 34 FANRLRKGDKRFRKWARTQGLTAFRVYDRDIPEYPYAIDVYGDRVHVVEYPRRRAIASGA 93 Query: 455 ARQRLFDIIAATISVLGIAPNKLVLKTRERQK-GKNQYQKLGEKGEFLEVTEYNAHLWVN 513 A + +++AA VL + ++ +KT Q G++QY ++G+ + V E WVN Sbjct: 94 ADTQREEVLAAVTQVLAVPSERVFVKTHTPQPWGRSQYGRVGQDSGRIVVEEQGLKFWVN 153 Query: 514 LTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTY 573 L DYLDTGLF+DHR R + + ++GK FLNLF+YTG+ TV+A GGA ST TVD+S TY Sbjct: 154 LGDYLDTGLFMDHRNTRARVREEARGKRFLNLFAYTGAFTVYAAAGGAASTMTVDLSNTY 213 Query: 574 LEWAERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAFD 630 L+WAE NL LNGL H L++AD AW+ +A E++DL+ DPP+FS SK+M +F+ Sbjct: 214 LDWAEDNLDLNGLADARHTLVRADAKAWVEAQADAPERYDLVVCDPPSFSTSKKMSGSFN 273 Query: 631 VQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARN 690 VQRDH L+ ++ LL GG + FS N GF+ L+ A G++ +EIT +++ +DF R Sbjct: 274 VQRDHPRLLAAIRALLAPGGVLYFSTNFLGFQ--LEPKATRGMEVEEITPRSIPEDFQR- 330 Query: 691 RQIHNCWLITA 701 ++IH CW + A Sbjct: 331 KEIHRCWRMVA 341 >UniRef50_Q6MHD5 Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHD5_BDEBA Length = 305 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 144/307 (46%), Positives = 195/307 (63%), Gaps = 10/307 (3%) Query: 397 NRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKAR 456 NRL KN KK + WA + IE YRLYD D+PEY VD Y D ++ + + + ++ + Sbjct: 6 NRLEKNYKKLKNWAERAQIEAYRLYDRDIPEYPYIVDIYKDHFLIYDKSDLRDLE----K 61 Query: 457 QRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTD 516 L + A ++ +K+V+K RERQ+G QY+KL K E V E A L VNL D Sbjct: 62 NHLPHVQEALKALFKCDDSKIVIKKRERQEGLKQYEKLDAKEETFVVRESQALLKVNLYD 121 Query: 517 YLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEW 576 YLDTGLFLDHR R+ + + K K FLNLF YTGS +V A LGGA TT+VDMS+TYL W Sbjct: 122 YLDTGLFLDHRPMRQKVFKSVKDKKFLNLFCYTGSVSVFAALGGA-ITTSVDMSQTYLRW 180 Query: 577 AERNLRLNGLTGRAHRLIQADCLAWLR--EANEQFDLIFIDPPTFSNSKRMEDAFDVQRD 634 A+ N +LN L H I AD L WLR ++ FD+IF+DPPTFSNSK+M+D F+V+RD Sbjct: 181 AQENFQLNNLDPAKHNFINADVLEWLRNTKSPNTFDVIFLDPPTFSNSKKMDDTFEVERD 240 Query: 635 HLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIH 694 L++ +LR G + FSNNKR F++ L+K K +EIT +++ QDF +++IH Sbjct: 241 QEFLVESCMNMLRPEGILYFSNNKRKFKISPAVLSK--YKVKEITAESIPQDF-HDKKIH 297 Query: 695 NCWLITA 701 NC+ I + Sbjct: 298 NCFEIRS 304 >UniRef50_B8FHN3 Putative RNA methylase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHN3_DESAA Length = 382 Score = 265 bits (677), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 137/380 (36%), Positives = 213/380 (56%), Gaps = 5/380 (1%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 LF S +R +L EL+ L GV F D Y+ ++WSR ASR+++ + + Sbjct: 3 LFVSCSRKTAPILAEELKGLCIENISESAAGVRFDADLATAYKVILWSRTASRVLMTVAK 62 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 K + LY G++ I+WTE + + AV F+ + ++Q+GA +VKDA+VD F + Sbjct: 63 FKADNQQALYEGIREIDWTEHLDYRKSIAVDFTSTRSALSHTQFGAQRVKDAVVDQFKKD 122 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 R V+ + PD+R+NV + + A ++DLSGD LH RGYR G+AP++E LAAAI++ Sbjct: 123 VGDRLMVNTNRPDVRINVHVQNDEAVASIDLSGDSLHKRGYRLEGGVAPLRENLAAAILL 182 Query: 184 RSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 R+GW + G PL+DPMCGSGT +IE A++A + APGL R +GF GW HD+++W + Sbjct: 183 RAGWPEIARTGGPLIDPMCGSGTFVIEGALMAANIAPGLLRNYFGFVGWKGHDKSLWAGM 242 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 +A A +G GSD R ++ A+ N AG+ + E +++A+ P+ Sbjct: 243 VGDASRLAEEGKKRLPP-IVGSDHHPRAVEHAKANVTRAGMTGYVKIEHREMAKARPPMK 301 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 G V NPPYGER+ L AL+ LG ++ +F + ++L + P++ + L Sbjct: 302 AKMPGLVAVNPPYGERIGESEELAALYKELGSVLSKRFRRYKVALITGHPEVAKNIGLGK 361 Query: 360 DKQYKAKNGPLDCVQKNYHV 379 K NGP++C Y V Sbjct: 362 RKASTLFNGPIECKLYRYEV 381 >UniRef50_B8GQ82 Oxidoreductase n=26 Tax=Proteobacteria RepID=B8GQ82_THISH Length = 321 Score = 264 bits (674), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 145/320 (45%), Positives = 194/320 (60%), Gaps = 14/320 (4%) Query: 384 PDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQE 443 PD P + NRL KNL+ + KWAR++GIEC+R+YD DLPE+ VA+D YA VQ Sbjct: 2 PDPTP------FLNRLTKNLRHWSKWARRQGIECFRIYDRDLPEFPVAIDVYAGRPHVQA 55 Query: 444 YAPPKTIDAHKARQRLFDIIAATIS-VLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLE 502 + D + D + T++ + I P +L K R RQKG +QY+ G Sbjct: 56 FETRWEAD-EATYEAWVDAVRGTVAGLFEIPPAELAFKVRRRQKGTDQYEATGNPPAPFV 114 Query: 503 VTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGAR 562 V E V+L YLDTGLFLDHR+ R ++ + ++ K FLNLF+YTGS TVHA GGA Sbjct: 115 VHEDGLKFEVDLHRYLDTGLFLDHRVTRALVREQARDKRFLNLFAYTGSFTVHAAAGGAS 174 Query: 563 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREAN---EQFDLIFIDPPTF 619 S+ T+D+S TY +W RNLRLN L HRL + D + WL ++ E+FDLI +DPP+F Sbjct: 175 SSLTLDLSNTYQDWTRRNLRLNDLDRPEHRLERCDVMDWLEHSSKIEERFDLIVMDPPSF 234 Query: 620 SNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEIT 679 SNSK M+ DVQRDH ++ LL A G + FSNNKRGF++ D L L ++IT Sbjct: 235 SNSKAMDTTLDVQRDHPWMINRALSLLTADGVLYFSNNKRGFKLYEDELIPCEL--EDIT 292 Query: 680 QKTLSQDFARNRQIHNCWLI 699 +KT +DF R+ H CW+I Sbjct: 293 RKTTPEDFRRH-PPHRCWVI 311 >UniRef50_Q55156 Putative RNA methyltransferase slr0064 n=22 Tax=Cyanobacteria RepID=Y064_SYNY3 Length = 384 Score = 258 bits (660), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 135/375 (36%), Positives = 212/375 (56%), Gaps = 6/375 (1%) Query: 5 FASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGEC 64 FA+ ARGLE + EL LGA + + GV F GD L+Y+ +WSRL R+++P+ Sbjct: 15 FATVARGLEAIAAQELTELGAEQVKPEFAGVAFIGDRALLYRINLWSRLIYRVLMPMATV 74 Query: 65 KVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKN 124 K ++ DLY ++ I+W E F+P T ++ +G N + +S + A++VK+AIVD + Sbjct: 75 KAFNAQDLYRSIKKIDWDEYFSPEQTLQINCTGKNPQLNHSHFTALQVKNAIVDQQRDRY 134 Query: 125 LPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMR 184 R +VD + PDI +N +H+ ++LD +G LH RGYR G AP+KETLA+A++ Sbjct: 135 QRRSSVDLEQPDIVINAHIHQNHCQLSLDSTGFSLHRRGYRPALGNAPLKETLASALLTM 194 Query: 185 SGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQ 244 +GW P PL DP+CGSGT L+EA + + + APG + + F W D+ +W + A+ Sbjct: 195 AGWTPELPLYDPLCGSGTFLLEAGLQSLNIAPGKFQPGFCFQQWPDFDQDLWHSLLQTAK 254 Query: 245 TRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYG 304 R L + +GSD D VIQ A++NA+ +G I ++ + A + P + G Sbjct: 255 AGERDTL---QAPLWGSDGDREVIQAAKSNAQQCQLGGKIHWQKLNFADIEPPAAE---G 308 Query: 305 TVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYK 364 ++ NPPYG+R+ E AL + +G ++K +F GW +FS + L + LR ++ Sbjct: 309 VLICNPPYGKRIGQEEALGDFYQQIGDVLKQRFRGWTAFVFSGNKALTKRIGLRTSARFP 368 Query: 365 AKNGPLDCVQKNYHV 379 NG L C Y + Sbjct: 369 VNNGGLPCTLLKYEL 383 >UniRef50_C9Q0K8 THUMP domain/methyltransferase domain protein n=25 Tax=Bacteroidales RepID=C9Q0K8_9BACT Length = 513 Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 140/418 (33%), Positives = 222/418 (53%), Gaps = 26/418 (6%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 L A T GLE +L EL +GA Q+ + V F GD +Y++ A RI+ P+ + Sbjct: 5 LIAKTFMGLEPVLAKELTQMGANNVQIGRRMVSFTGDKETMYRANFQLHTAIRILKPIAK 64 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 K S D+Y +Q I+W++ G TF+V ++ RNS++ KVKDAIVD F + Sbjct: 65 FKAKSADDVYEEIQKIDWSQHIEDGKTFSVDSVVYSEEFRNSRFVTYKVKDAIVDQFRER 124 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 RPN+ PDIR+N+ + + +++LD SG+ LH RGYR + AP+ E LAA +++ Sbjct: 125 TGKRPNISVSNPDIRLNIHIAEYDCTLSLDSSGESLHRRGYRQESVEAPLNEVLAAGMIL 184 Query: 184 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEA 243 +GWQ T +DPMCGSGTL++EAA++A + +PG+ R + F W D+ ++ + + Sbjct: 185 MTGWQGETDFIDPMCGSGTLVVEAALIARNISPGVFRKNYAFEKWPDFDQELFDNIYNDD 244 Query: 244 QTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPY 303 E++ H YG D D + + AR N R +G+ + IT E D P K Sbjct: 245 SNE-----REFTHHIYGYDIDMKAVNTARLNVRASGLTKDITIEQADFKDFKKPENK--- 296 Query: 304 GTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQY 363 +++NPPYGER+ S P L+ + ++G +K+QF G + + S + + L+ + Sbjct: 297 SILVTNPPYGERI-STPNLLGTYKMIGERLKHQFMGNDAWVLSYREECFDQIGLKPSIKI 355 Query: 364 KAKNGPLDCVQKNYHVAE-------------STPDSKPAMVAEDYTNRLRKNLKKFEK 408 NG L+C + Y + + T D K M + NR +KN ++F+K Sbjct: 356 PVYNGSLECEFRKYAIFDGSLRDFRQEGGVVKTDDEKRQMAEK---NRFKKN-REFKK 409 >UniRef50_Q6MPB2 Putative N6-adenine-specific DNA methylase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPB2_BDEBA Length = 374 Score = 252 bits (643), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 146/372 (39%), Positives = 221/372 (59%), Gaps = 6/372 (1%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M FASTARGL E L+ EL+ LG GGV F+ + Y++ + SRLASRI+ P Sbjct: 1 MPQFFASTARGLVEPLELELKELGLKVTDRYIGGVFFESNWEGCYKANLHSRLASRILKP 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + + Y +LY + ++T+ P T ++ S +R+ ++ AMKVKDAIVD F Sbjct: 61 VLDFTAYQPEELYSQILRHDFTKYIKPTQTISIDASVNESKMRDQRFVAMKVKDAIVDQF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 K RP+VD PD+R++V K ++A+D SGD L RGYR G AP+KE LAA Sbjct: 121 REKFGVRPDVDNTNPDLRIHVRAIKNQFNVAIDTSGDSLFKRGYRKEVGEAPLKENLAAG 180 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 ++ S W +PL+D MCGSGT LIEAAM++ + APG++R +GF W ++E W++V Sbjct: 181 LLRLSEWDRQSPLVDFMCGSGTFLIEAAMMSMNIAPGINRKGFGFQNWLNYEEETWEKVI 240 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 EA ++ E FYG D D RV+ A+ NA+ AG+ E+I F+ + VA + P+ K Sbjct: 241 QEAMDAEKE---ELDFKFYGFDIDKRVLMNAKDNAKRAGVDEVIEFKKESVATVEPPVEK 297 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G ++ NPPYG R+ E L ++ L MK++F GW+ + S + +L++ L+L++ Sbjct: 298 ---GLIIVNPPYGARIGDEDNLRDVYRDLSFTMKHRFKGWDAWILSGNKELIADLKLKST 354 Query: 361 KQYKAKNGPLDC 372 +++ NG ++C Sbjct: 355 RKHFVFNGNIEC 366 >UniRef50_A1ARJ2 Putative RNA methylase n=9 Tax=Desulfuromonadales RepID=A1ARJ2_PELPD Length = 393 Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 144/375 (38%), Positives = 209/375 (55%), Gaps = 7/375 (1%) Query: 5 FASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGEC 64 FA+ RG E++ EL LG Q +GGV F+ + +Y++ +W R ASR+++ L Sbjct: 25 FAAVPRGSEDVTAAELRLLGIEGAQAGRGGVSFRTNRAGLYRANLWLRSASRVLVRLAGF 84 Query: 65 KVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKN 124 S +LY GV AI W EM P T AV S + + +S + A+K KDAIVD Sbjct: 85 PCSSPAELYDGVHAIPWQEMITPAMTLAVDCSLRDSALTHSGFVALKTKDAIVDRIREAC 144 Query: 125 LPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMR 184 RPNVD +PD+RVN+ L K +++LD SGD L RGYR AP++ETLAAAI+ Sbjct: 145 GSRPNVDTASPDVRVNIHLVKNVCTVSLDSSGDALDRRGYRLERNEAPLRETLAAAIIAL 204 Query: 185 SGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQ 244 +GW L DPMCGSGT+ IEAA++A PG +R +GF W D +W+ ++AEA+ Sbjct: 205 TGWDGNVALADPMCGSGTIPIEAALMAARVPPGRNRS-FGFQRWQDFDPRLWKGIQAEAE 263 Query: 245 TRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYG 304 + R+ S G DSD+R + AR NA AG + F + Q P+G G Sbjct: 264 SGIRQLPVGLVS---GYDSDSRALSIARRNAAAAGFEGQVHFFHSSLEQFR---PEGEGG 317 Query: 305 TVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYK 364 V+ NPPYG+R+ E L L+ +G I+K + GW + + + +L + L+A +++ Sbjct: 318 VVIINPPYGKRMGEEDELKELYCQIGDILKQRCQGWTGYVLTGNLELAKYIGLKASRRFV 377 Query: 365 AKNGPLDCVQKNYHV 379 NGP++C Y + Sbjct: 378 LYNGPIECRLLKYEL 392 >UniRef50_Q04XY1 SAM-dependent methyltransferase n=4 Tax=Leptospira RepID=Q04XY1_LEPBL Length = 335 Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 137/309 (44%), Positives = 192/309 (62%), Gaps = 9/309 (2%) Query: 395 YTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHK 454 + NRL + K ++KWAR+ GIEC+R+YD D+P+ V+VD Y + + Y I Sbjct: 22 FRNRLLRMSKHWKKWARKRGIECFRIYDRDIPQVPVSVDLYGPYCQISAYKNSYEISDET 81 Query: 455 ARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNL 514 + +I L + + K RE +KGK QY+K E+ + LEVTE ++NL Sbjct: 82 RERENVEIRQIVAETLNLDAGFIFWKKREPKKGKKQYEKQSEQSKLLEVTENGLRFYINL 141 Query: 515 TDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYL 574 +DY+DTGLFLDHRI R ++ + SKGK FLNLFSYTGS TV+A GGA + ++D+S TYL Sbjct: 142 SDYIDTGLFLDHRITRDLIRKESKGKKFLNLFSYTGSFTVYAASGGATQSLSIDLSNTYL 201 Query: 575 EWAERNLRLNGLTGRAHRLIQADCLAWL-----REANEQFDLIFIDPPTFSNSKRMEDAF 629 WAE NL+LNGL+ HRL++AD + WL + E++DLI +DPPTFSNSK+M F Sbjct: 202 AWAEENLKLNGLSLIKHRLLRADVVEWLYNERKKPDRERYDLIVLDPPTFSNSKKMTGIF 261 Query: 630 DVQRDHLALMKDLKR-LLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFA 688 D+Q+DH+ ++ L R G + FS N R F +L + L ++IT+ TL DF Sbjct: 262 DIQKDHVEILNILYRDFALPGAVLYFSTNFRKF--ELSQTSVLWNNPKDITKMTLPDDF- 318 Query: 689 RNRQIHNCW 697 RN++IH CW Sbjct: 319 RNQKIHFCW 327 >UniRef50_Q7NRS5 Probable oxidoreductase n=1 Tax=Chromobacterium violaceum RepID=Q7NRS5_CHRVO Length = 397 Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 145/371 (39%), Positives = 206/371 (55%), Gaps = 9/371 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 ++FA RGLE++L EL LGA + GGV F GD RL+ + SR ASR++L L Sbjct: 6 AMFAPCPRGLEQILADELLALGAGDIAPADGGVAFAGDARLMMAVNLHSRTASRVLLRLA 65 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 +++ D+Y +++W F T + G+ +++ Y + VKDAI D F + Sbjct: 66 HGGYHAEQDIYRLAMSVDWPRWFEVSRTIKLKADGIAARVKSLDYIGLTVKDAICDRFRQ 125 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 +L RP+VD PD+RVNV+L + A+I LD SG+ L RG+R+ G AP++E LAA I+ Sbjct: 126 AHLGRPSVDTRHPDVRVNVFLTADEATIYLDTSGEPLFKRGWREETGEAPLRENLAAGIL 185 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 + +G+ PLLDPMCGSGT L+EAA +A +RAPG R R+GF + D A W+++ Sbjct: 186 LLAGYDGSQPLLDPMCGSGTFLVEAADIALNRAPGRAR-RFGFEALSSFDSAAWEKL--- 241 Query: 243 AQTRARKGLAEYSS-HFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 Q ARK SS GSD ++ AR N AG+ EL+ DV T P Sbjct: 242 -QQDARKAEQPASSLAIRGSDRSQAMVNIARANLERAGLAELVEVSAADV---TASRPHA 297 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 +G ++SNPPYG RL+ + L A + LG +K F GW LFS L ++L + Sbjct: 298 EHGLIVSNPPYGVRLEEQDQLAAWYPELGDWLKAHFAGWTACLFSGDLRLGKLIRLAPKR 357 Query: 362 QYKAKNGPLDC 372 + NG L C Sbjct: 358 RTPLFNGSLQC 368 >UniRef50_C0DRY4 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DRY4_EIKCO Length = 420 Score = 248 bits (632), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 141/372 (37%), Positives = 210/372 (56%), Gaps = 7/372 (1%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 +++LFA+ RGLE +L EL+ G GGV +G Y++ + SR ASRI+L Sbjct: 38 IHTLFATCPRGLETILTQELDAQGCTHIAPTDGGVSCQGSLEAAYRANLHSRTASRILLQ 97 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L + S+ D+Y ++I W + F+ G TF + G +++ + A+K+KD + D F Sbjct: 98 LAKQPYRSEDDIYRAAKSIRWEDWFHAGQTFKIKVEGKRARVKSLDFTALKIKDGLCDRF 157 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RP+VD+ P IR++ ++ ++ A+I +D SG+ L RGYR G AP++E LAA Sbjct: 158 RSNQGQRPSVDKSNPHIRIHAFISEQHAAIFIDTSGEALFKRGYRQDTGAAPLRENLAAG 217 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +++ +G+ P DP CGSGTL IEAA++AT RAPGL R R+GF D +WQ ++ Sbjct: 218 LLLLAGYNGSQPFQDPFCGSGTLPIEAALIATRRAPGLER-RFGFEQLDNFDADLWQRLR 276 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 EAQ L + + GSD+D R+IQ A NAR A + I F+V DV + P Sbjct: 277 QEAQAAV---LPQAPAPIAGSDTDRRLIQTAAINAREAQVAGHIIFQVADV---RDTRPN 330 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G G +L+NPPYG RL+ L AL+ LG +K + GW L +A D+ ++L Sbjct: 331 GENGILLANPPYGVRLEEVQTLHALYPQLGSWLKQHYPGWLCGLLTADRDMPKLMRLSPK 390 Query: 361 KQYKAKNGPLDC 372 ++ NG LDC Sbjct: 391 RKIPLYNGNLDC 402 >UniRef50_C6WWA7 Putative RNA methylase n=2 Tax=Betaproteobacteria RepID=C6WWA7_METML Length = 421 Score = 246 bits (629), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 129/371 (34%), Positives = 206/371 (55%), Gaps = 7/371 (1%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 N FA+ RGLE+LL EL+ + A V GGV F GD + Y + + SRLA+RI+ + Sbjct: 39 NRYFATCPRGLEQLLADELKQISAKVVNVTDGGVSFDGDWSICYAANLHSRLATRILWQV 98 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 G K ++ DL+ +NW + F+ F V +G+ +++ ++ +K+KDA+ D F Sbjct: 99 GRGKYLNEEDLFNAAYKMNWPQWFDVKHDFMVKVTGVKCPLKSLEFATLKIKDAVCDKFR 158 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 + RP +D P +R++ +L + +D SG L+ RG R + AP++E LAA I Sbjct: 159 QAVGSRPYIDTKTPSVRIHAYLTTDEYQYYVDTSGAALYQRGNRGASIEAPLRENLAAGI 218 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + +GWQ G PLLDPMCGSGT L+EAAM+A D APG+ R +GF + W+++K Sbjct: 219 LKLTGWQVGQPLLDPMCGSGTFLLEAAMVALDMAPGIKR-EFGFEKLKTFESDTWKKIKN 277 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 +A ++ +K + YGSD D R ++ + N AG+ E + D + N +P Sbjct: 278 QALSKVKKVSFQ---KIYGSDMDLRAVRVTKQNLEAAGLLEAVQVSHVD---MLNVIPPV 331 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 +G +++NPPYG R+ + L L+ +G +K++F GWN + + ++L K Sbjct: 332 DHGVLVANPPYGVRIGEDEVLTLLYPKMGETLKHKFAGWNTYFLTNDLRMPKLMRLSPSK 391 Query: 362 QYKAKNGPLDC 372 + NGPL+C Sbjct: 392 KTPLFNGPLEC 402 >UniRef50_D0LH66 Oxidoreductase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LH66_HALO1 Length = 365 Score = 246 bits (628), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 136/319 (42%), Positives = 185/319 (57%), Gaps = 9/319 (2%) Query: 385 DSKPAMVA---EDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVV 441 +++PA++A E NRLRK + KWAR+ G+ CYRLYD D+PE +A+D Y + V + Sbjct: 51 EAEPALIASHAEMLGNRLRKRARHLRKWARRRGVSCYRLYDRDIPEIALAIDLYGERVHI 110 Query: 442 QEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFL 501 Y + D A + + AT LG+ + LK R RQ+G QY++L E Sbjct: 111 ASYR--RRRDYGPAWRAA--MAQATADALGVERELVYLKERRRQRGSAQYERLERSRERF 166 Query: 502 EVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGA 561 V E LWVNL DYLDTGLFLDHR R + ++G FLNLF YTG+ TVHA GA Sbjct: 167 AVREGACELWVNLRDYLDTGLFLDHRDTRARVAAEAEGTRFLNLFCYTGAFTVHAAAAGA 226 Query: 562 RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSN 621 R + +VD+S TYL+W NL LNGL AHR ++ D +L FDL +DPPTFSN Sbjct: 227 RQSVSVDLSHTYLDWTRDNLELNGLDTDAHRQVREDVFTYLHGERLAFDLAVLDPPTFSN 286 Query: 622 SKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQK 681 SK+M D D+QRDH+ L+ LL GG + FS R F+++ + L + + +IT + Sbjct: 287 SKKMRDVLDIQRDHVELIARTLDLLVPGGVLYFSTGYRRFKLEREAL-RGARRIDDITAE 345 Query: 682 TLSQDFARNRQIHNCWLIT 700 T +DF R + H CW + Sbjct: 346 TTPEDF-RGHRPHQCWRLV 363 >UniRef50_B0SEV3 SAM-dependent methyltransferase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SEV3_LEPBA Length = 327 Score = 245 bits (625), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 133/313 (42%), Positives = 192/313 (61%), Gaps = 9/313 (2%) Query: 395 YTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHK 454 + NRLRK K+ EKWA++E I CYR+Y D+P+ +DRY + +V+ + + + Sbjct: 12 FENRLRKLKKEREKWAKRENINCYRIYSEDIPQIPFILDRYPNGLVLYDKSSLRFQAETD 71 Query: 455 ARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNL 514 RL +I+ + V I NKL LK R++QKG +QY+K +G F TE N +NL Sbjct: 72 HDARLKEIVRIVMEVFQIPENKLFLKQRKKQKGLDQYEKFSIEGNFFWTTEANLEFRINL 131 Query: 515 TDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYL 574 +DYLDTGLFLDHRI R L + SK K LNLFSYTG+ +V+A GGA T ++D+S+TY Sbjct: 132 SDYLDTGLFLDHRITRSWLKEKSKNKSVLNLFSYTGAFSVYAASGGASKTKSIDLSKTYC 191 Query: 575 EWAERNLRLNGLTGRAHRLIQADCLAWLREAN-----EQFDLIFIDPPTFSNSKRMEDAF 629 +WA +NLR NG G H++I AD L W+ E + E++D IF+DPPTFSNSK+M + + Sbjct: 192 DWAVQNLRRNGFEGSNHKIINADILKWIEEESKNPNRERYDFIFLDPPTFSNSKKMYEEW 251 Query: 630 DVQRDHL-ALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKL--GLKAQEITQKTLSQD 686 +VQ H L+ L + L G I FS N R F+M+++ G + T++++ D Sbjct: 252 EVQTKHRNLLLLLLTKFLSDKGEIWFSTNFRKFKMEVEEEEWKERGYQCLNRTKESIPPD 311 Query: 687 FARNRQIHNCWLI 699 F R+ +IH + I Sbjct: 312 F-RDEKIHQLFCI 323 >UniRef50_UPI0000E87EDF Putative RNA methylase:THUMP n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87EDF Length = 378 Score = 243 bits (621), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 131/368 (35%), Positives = 205/368 (55%), Gaps = 9/368 (2%) Query: 5 FASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGEC 64 FAS RGLEE+L+ EL + A + + V GG+ F GD ++Y++ + SR+A+RI+ + + Sbjct: 6 FASCPRGLEEVLQQELMEIHANDIKRVDGGMLFSGDKEVLYKANLSSRIATRILCLVKQG 65 Query: 65 KVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKN 124 ++ D++ ++ WT F T V + + +++ + +++KDA+ D F K Sbjct: 66 SYENEDDIFNAALSVEWTTWFALEKTIKVSTTAIQCPLKSIDFMTLRIKDAVCDIFREKT 125 Query: 125 LPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMR 184 RP+V+ PDIR++++L K S+ +D SG LH RG+R + APIKE LAA I+ Sbjct: 126 GKRPDVEVRDPDIRIHLFLEKNNFSLYIDTSGAPLHQRGFRTASVEAPIKENLAAGIIKL 185 Query: 185 SGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQ 244 SGW PG P LDPMCGSGT LIEAAM+A+++APGL+R +GF W D ++ +K Sbjct: 186 SGWNPGEPFLDPMCGSGTFLIEAAMIASNQAPGLNRN-FGFMAWKSFDNILFSTIKKTYM 244 Query: 245 TRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYG 304 + K + YGSD D R I+ ++ N LAG + K +++T P + G Sbjct: 245 DQVTK---KDFLKIYGSDKDLRAIRVSKKNLTLAGFENSVQLVCKQFSEITPPYSE---G 298 Query: 305 TVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYK 364 +++NPPYGER+ E L + + +K F GW + + ++L K+ Sbjct: 299 VLVTNPPYGERIGEE--LDSAYPEWATSLKQSFAGWRTYFLTNDFRMPKLMRLSPSKKTP 356 Query: 365 AKNGPLDC 372 NG LDC Sbjct: 357 LYNGALDC 364 >UniRef50_UPI00016C3D60 hypothetical protein GobsU_18040 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3D60 Length = 375 Score = 241 bits (616), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 142/374 (37%), Positives = 217/374 (58%), Gaps = 9/374 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M FA+ ARGLE +L +EL+ LGA + +GGV F+G L+Y++ +W R A R++ P Sbjct: 1 MTRYFATCARGLEPVLASELDALGAEAVEPGRGGVTFQGPPALLYRACLWLRTAVRVLRP 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + E +V++ +LY V++INW + P T AV + + + +SQY A +VKDAI D F Sbjct: 61 VHEFEVHNSDELYDAVRSINWADWMTPDQTLAVDCNVRDSALTHSQYAARRVKDAICDQF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + RP+VD D P I +N+ + K A ++LD S LH RGYR IAP+ E LAA Sbjct: 121 RERVGRRPSVDPDQPMIGLNLHVSKNHAVLSLDSSWSSLHKRGYRPIQTIAPLNEALAAG 180 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +++R+ W TPL+DPMCGSGT +E A +A +R PGL R + F GW D +W ++ Sbjct: 181 LLLRAKWDKNTPLVDPMCGSGTFCVEGAWIALNRPPGLTRKWFAFQGWPDFDRTVWNAIR 240 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP--L 298 +A+ L E + GSD + I A+ NAR AG+G L+ + ++ + P + Sbjct: 241 DDARAAV---LKELPAPICGSDVRSDAISLAQMNARAAGVGHLLNLQKLELREARPPSDV 297 Query: 299 PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 P GT++ NPPYGER+ E LI L++ +G + K + GW L + +++ L ++L+ Sbjct: 298 P----GTLVCNPPYGERIGEEEELIPLYARIGAVAKEFWPGWRLLVLTSNTMLAKKIRLK 353 Query: 359 ADKQYKAKNGPLDC 372 + NG L+C Sbjct: 354 VVHKEPFFNGSLEC 367 >UniRef50_C7PR68 Methyltransferase type 11 n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PR68_CHIPD Length = 315 Score = 239 bits (610), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 128/307 (41%), Positives = 185/307 (60%), Gaps = 7/307 (2%) Query: 397 NRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKAR 456 NRL K K K AR++ I C+R+YD D+PE+ +++ Y D + V EY +D +A Sbjct: 12 NRLLKVYKHLRKTARRQNITCFRVYDDDIPEFPFSIELYEDHIYVAEYHRQHGMD-EEAH 70 Query: 457 QRLFDIIAATIS-VLGIAPNKLVLKTRERQKGKN-QYQKLGEKGEFLEVTEYNAHLWVNL 514 + D+ IS VL + K+ +K R+R+ + QY+KL + + E VNL Sbjct: 71 EEWLDLCLEVISKVLEVPLEKIFVKQRQRKASRQEQYEKLSFESHEMVANEAGLKFKVNL 130 Query: 515 TDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYL 574 +DYLDTGLFLDHRI R M+ + S GK LNLF YTGS +V+A G A T+VD+S+TYL Sbjct: 131 SDYLDTGLFLDHRITRGMVREQSAGKKVLNLFCYTGSFSVYAAAGNAAQVTSVDLSKTYL 190 Query: 575 EWAERNLRLNGLTGRAHRLIQADCLAWLRE-ANEQFDLIFIDPPTFSNSKRMEDAFDVQR 633 WAE N++LN H+ + AD L +L E FDL+ +DPPTFSNSKRM++ D+QR Sbjct: 191 AWAEENMKLNDFDVSKHQFVHADVLQYLDTLPAETFDLVVLDPPTFSNSKRMKEFLDIQR 250 Query: 634 DHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQI 693 DH++++ + R GG I FSNN R F ++ D + L + ++IT +T+ DF + + I Sbjct: 251 DHVSILNKVLAATRPGGVIYFSNNYRRFVLEADRI--LASEIKDITSQTIPFDF-QQKLI 307 Query: 694 HNCWLIT 700 C+ I Sbjct: 308 RKCYRIV 314 >UniRef50_B4RPC6 Tou5 n=34 Tax=Proteobacteria RepID=B4RPC6_NEIG2 Length = 380 Score = 239 bits (609), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 137/374 (36%), Positives = 209/374 (55%), Gaps = 12/374 (3%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + +LFA+ RGLE +L ELE+LG E + GGV +G Y + + SR A RI+L Sbjct: 4 LYTLFATCPRGLETVLSQELESLGCTEVRAFDGGVSCRGGLEQAYAANLHSRTAGRILLR 63 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L + ++ D+Y + INW F TF V +++ Q+ + VKDA+ DAF Sbjct: 64 LTKGTYRTERDIYKLAKNINWFNWFTLQQTFKVKIEAKRANVKSLQFAGLTVKDAVCDAF 123 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RP+VD+ APD+R++ +L + I +D SG+ L RGYR G AP++E LAA Sbjct: 124 RDIYDARPSVDKAAPDVRIHAFLDERNVEIFIDTSGEALFKRGYRLDTGEAPLRENLAAG 183 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV- 239 +++ +G+ P DP CGSGT+ IEAA +A RAPG+ R R+GF D+ +W ++ Sbjct: 184 LLLSAGYDGTQPFQDPFCGSGTIAIEAAWIAAGRAPGMMR-RFGFEKLQNFDKTLWADLR 242 Query: 240 -KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 +AEAQTR + + GSD+ R++Q A NA AG ++++F V D + Sbjct: 243 RRAEAQTRPVR------APIAGSDNGRRIVQTALDNAHNAGADDIVSFSVADAQSVR--- 293 Query: 299 PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 P G G ++SNPPYG RL+ AL AL+ LG +K + GW + +F+ ++ ++L Sbjct: 294 PNGENGIMVSNPPYGVRLEEVRALQALYPQLGTWLKKHYAGWRVGMFTGDREMPKFMRLL 353 Query: 359 ADKQYKAKNGPLDC 372 ++ NG +DC Sbjct: 354 PKRKIPLYNGNIDC 367 >UniRef50_B6BTD9 N6-adenine-specific DNA methylase n=1 Tax=beta proteobacterium KB13 RepID=B6BTD9_9PROT Length = 387 Score = 238 bits (606), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 132/370 (35%), Positives = 195/370 (52%), Gaps = 8/370 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 SLFA+ RGLE+ L E+ +L + +V GGV F G+ ++ + SR A+R++ L Sbjct: 7 SLFATCPRGLEKFLFNEIRSLDGQKIKVHDGGVSFNGNQDSMHSLNLTSRYATRVLKRLS 66 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + S+ DLY + W ++F T V + + ++++ + +K+KDAI D F + Sbjct: 67 YGQFKSENDLYQAAMKVKWDDIFPVNKTIKVSTTSIKTSLKSIDFVTLKIKDAICDVFNQ 126 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 K RPNVD PDI+V+++L K I +D SG L+ RGYR + AP+KE LAA I+ Sbjct: 127 KYKLRPNVDVRDPDIKVHLFLEKNNFIIYIDSSGKPLYQRGYRQKTIEAPLKENLAAGII 186 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 S W PLLDPMCGSGTL IEAAM+A + PG++R +GF W D+ ++ ++K + Sbjct: 187 TLSDWDFKEPLLDPMCGSGTLPIEAAMMALNIYPGMNRT-FGFHHWHDFDKEVFHKIKVQ 245 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 + + E H Y SD D + A TN G+ I + P Sbjct: 246 LKEKQ----IEKELHIYASDIDRQAFNAASTNIDQMGLKPYIRINNRRFETSNAP---ND 298 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 +G ++ NPPYG RLD L+ + L G ++K +F GW S L+L A K+ Sbjct: 299 HGVIVCNPPYGVRLDESEKLLESYQLWGSVLKKEFSGWRAYFISNDIAFPRGLRLSASKK 358 Query: 363 YKAKNGPLDC 372 NG LDC Sbjct: 359 TPLYNGALDC 368 >UniRef50_D1R8Y2 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R8Y2_9CHLA Length = 358 Score = 238 bits (606), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 121/309 (39%), Positives = 178/309 (57%), Gaps = 7/309 (2%) Query: 397 NRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKAR 456 NR+RKN + KWA++ +C+R+YD ++P+Y + +D Y V ++ + + A Sbjct: 53 NRIRKNYRHIRKWAKRTNTDCFRIYDREIPQYPLTIDFYDGRFCVHYFSRTREKEELPAE 112 Query: 457 QRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTD 516 + +++ + I P+K+ KTR + K QY+K + EF V EY +NL D Sbjct: 113 LEV-EVVQVLSKIFAINPDKVFWKTRAKHKETRQYEKEDDSREFFSVLEYGVKFRINLLD 171 Query: 517 YLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEW 576 YLDTGLFLDHR R+++ + GK LNLF+YT S +V A GA T +VDMS TY W Sbjct: 172 YLDTGLFLDHRETRQLVAATANGKRLLNLFAYTCSFSVQAAAAGASFTKSVDMSNTYTAW 231 Query: 577 AERNLRLNGLTGRAHRLIQADCLAWLRE---ANEQFDLIFIDPPTFSNSKRMEDAFDVQR 633 E+N LN + + + +++ADCL +L + + E++D+I IDPPT S SK+M+ FDVQ Sbjct: 232 GEKNFLLNKFSLKNNPVVRADCLKFLDQEIRSGEKYDIIVIDPPTISRSKKMDQLFDVQV 291 Query: 634 DHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQI 693 D++ L+ +LL G I FS N R F D A G K EI+ KTL DF + +I Sbjct: 292 DYIYLISKSLKLLSPEGVIYFSTNSRKFVFDESNFA--GCKIFEISSKTLPIDF-HDPKI 348 Query: 694 HNCWLITAA 702 H CW I + Sbjct: 349 HRCWKIVKS 357 >UniRef50_Q73LF1 Putative uncharacterized protein n=1 Tax=Treponema denticola RepID=Q73LF1_TREDE Length = 335 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 137/326 (42%), Positives = 195/326 (59%), Gaps = 18/326 (5%) Query: 392 AEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRY---------ADWVVVQ 442 AE + NRL+K K KWA++EG+ YRLYD D+PE +AVD Y ++++ Sbjct: 8 AELFKNRLQKRFKHLLKWAKREGVFAYRLYDKDIPEIPLAVDIYFAETEETEKRAFLLIY 67 Query: 443 EYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLE 502 Y P + R+ L I A S L I ++ +K RE+QKGK+QY+K G + Sbjct: 68 LYKRPYEKSQEEEREWLLVIEEAASSSLLIPKERIFIKLREKQKGKSQYEKAGSSKNLIR 127 Query: 503 VTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGAR 562 V E +VN+ DYLD+GLFLDHR AR M+ + +K K LNLFSYTGS +VHA GGA Sbjct: 128 VKEGECFFYVNVEDYLDSGLFLDHRPARSMVFKEAKNKKVLNLFSYTGSFSVHAAKGGAA 187 Query: 563 STTTVDMSRTYLEWAERNLRLNGLTGRAH-RLIQADCLAWLREANEQ---FDLIFIDPPT 618 S +VD+S TYL WA+ NL+LN L +LI++D + +L++A E+ +DLI DPPT Sbjct: 188 SVDSVDLSNTYLNWAKENLKLNKLFDEEKTQLIKSDVIVFLKKAIEEQKKWDLIICDPPT 247 Query: 619 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD---LDGLAKLGLKA 675 FSNSK D FDV RD L L ++L G + FS N + + D L ++ ++ Sbjct: 248 FSNSKSA-DIFDVNRDWLKLCLLCLKVLSKNGKLYFSTNSQKIKFDEAELINFSEQKIRV 306 Query: 676 QEITQKTLSQDFARNRQIHNCWLITA 701 ++IT+ ++ +DF RN++IH W+I A Sbjct: 307 KDITKASIPEDF-RNQKIHKMWMIEA 331 >UniRef50_Q2YA86 Putative RNA methylase n=3 Tax=Betaproteobacteria RepID=Q2YA86_NITMU Length = 399 Score = 234 bits (597), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 130/379 (34%), Positives = 204/379 (53%), Gaps = 7/379 (1%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 ++ FA RG+E L ELE LGA GGV F+GD Y++ + SR+ASRI+ Sbjct: 3 LHHFFAPCPRGVESGLVAELECLGASAINPQDGGVEFQGDWDTCYRTNLESRIASRILWR 62 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + +++D+Y + + W + F+P T V+ + + +++ + +K+KD + D F Sbjct: 63 VASEPYATEIDVYKVARQLPWHDWFSPALTIKVNVAAIRCPLQSLDFVTLKIKDGVCDRF 122 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RP+VD PDIR++ +L S+ LD SGD L RG R G AP++E LAA Sbjct: 123 REVAGNRPSVDTVQPDIRIHGFLDARRISLYLDTSGDALFKRGLRKNTGEAPLRENLAAG 182 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 I+ + W+PG PLLDPMCGSGT L+EAA +A + PGL R + F D+ W++++ Sbjct: 183 ILSLADWRPGIPLLDPMCGSGTFLLEAAQIALNIPPGLGRS-FAFEKLRIFDKKRWEQIR 241 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 A + + +GSD I A+ N AG+ E +T + +V +L+ P Sbjct: 242 KAAIAGQK---TKSQQPIFGSDLYGNAIAVAQANLSAAGLSEAVTLKQANVLELSAP--- 295 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G +++NPPYG RL + L+ + LG ++K +F GWN + +A P L ++L A Sbjct: 296 ASSGFLVTNPPYGVRLGEQKQLMEFYPKLGDVLKKKFSGWNAYILTADPQLPKLIRLTAS 355 Query: 361 KQYKAKNGPLDCVQKNYHV 379 ++ NG L+C Y + Sbjct: 356 RRIPLFNGALECRLLEYKI 374 >UniRef50_B2RJX4 Putative N6-adenine-specific DNA methylase n=2 Tax=Porphyromonas gingivalis RepID=B2RJX4_PORG3 Length = 484 Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 132/385 (34%), Positives = 214/385 (55%), Gaps = 11/385 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 ++ A T GLE++L TEL L A E V + V F+GD R++Y + + R A RI+ P+ Sbjct: 8 AMVAKTLYGLEDVLATELTALEAEEVTVGRRMVSFRGDKRMLYLANLRLRTALRILKPVI 67 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + ++Y ++ +WT + + TF++ +D+ +NSQY + + KDA+VD F Sbjct: 68 TFHAKTTDEIYERLRLFDWTTVISSDQTFSIDSVVYSDSFKNSQYISYRTKDALVDFFRD 127 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + RP+V PDI +N+ + E +++LD SG+ LH RGYR AP+ E LAA I+ Sbjct: 128 REGKRPSVRLSNPDILLNIHVSHEEVTLSLDSSGESLHKRGYRVAETTAPLNEVLAAGIL 187 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV-KA 241 +++GW T L+DPMCGSGT LIEAA++A + APG++R + F WA D ++ E+ Sbjct: 188 LKAGWDGNTDLIDPMCGSGTFLIEAALIACNIAPGIYRRGFAFQRWADFDPDLYDELFHD 247 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 ++ R + YGSD + + AR+N AG+G I+ V + Q P K Sbjct: 248 DSAERV------FDHIIYGSDILPQAVAAARSNVERAGLGRYISLSVLPMQQRPKPESK- 300 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 ++ NPPYGER+ E + L++++G +K+ + G + + + P+ + + LR Sbjct: 301 --AMLVMNPPYGERIKVE-DMQQLYTMIGERLKHNYAGCSAWILAFKPEHFNHIGLRQSH 357 Query: 362 QYKAKNGPLDCVQKNYHVAESTPDS 386 + K NG L+C + Y + E DS Sbjct: 358 REKLMNGALECELRGYELFEGRRDS 382 >UniRef50_Q6MCL8 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MCL8_PARUW Length = 333 Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 123/316 (38%), Positives = 179/316 (56%), Gaps = 23/316 (7%) Query: 396 TNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQ---------EYAP 446 TNR+RKN + KWA++ C+R+YD ++ +Y +A+D Y V +Y P Sbjct: 23 TNRIRKNYRHIRKWAKRTQTNCFRIYDKEIHQYPLAIDFYDGRFCVHYFSKAANDNDYDP 82 Query: 447 PKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEY 506 PK + I A ++ + + +TR ++K QY++ G EF + E+ Sbjct: 83 PKELKEA--------TIHALKTIFNVEEELIFWRTRSKRKETRQYERQGNAKEFFSIVEF 134 Query: 507 NAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTT 566 VNL DYLDTGLFLDHR R+M+ Q S K LNLF+YT S +VHA GA T + Sbjct: 135 GVQFKVNLIDYLDTGLFLDHRETRKMVTQASINKKLLNLFAYTCSFSVHAAASGAIFTKS 194 Query: 567 VDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE---ANEQFDLIFIDPPTFSNSK 623 VDMS TY EW + N RLN L+ + + +I+ADCL +L + N Q+D+I IDPPT S SK Sbjct: 195 VDMSNTYTEWGKDNFRLNSLSLQNNEVIRADCLKFLDDEIKKNLQYDVIVIDPPTISRSK 254 Query: 624 RMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTL 683 +M+ FD+Q D+++++ +LL+ G I FS N R F + L L Q+++ KT+ Sbjct: 255 KMDQLFDIQVDYVSMLSKALKLLQKDGVIFFSTNFRKFVFN-QTLFPFCL-IQDVSHKTI 312 Query: 684 SQDFARNRQIHNCWLI 699 DF + +IH CW I Sbjct: 313 PIDF-HDSKIHRCWKI 327 >UniRef50_B5CV55 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CV55_9BACE Length = 506 Score = 231 bits (588), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 123/377 (32%), Positives = 212/377 (56%), Gaps = 11/377 (2%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 L A T +GLEE+L EL LGA ++ + V F GD ++Y++ R A RI+ P+ Sbjct: 7 LIAKTFQGLEEVLAQELTELGASNIEIGRRMVSFTGDKAMMYKANFCLRTAIRILKPIKH 66 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 + ++Y V++I W + ++F+V ++ R+S++ A KVKDA+VD F K Sbjct: 67 FTAKTADEVYEAVKSIAWENYLDNMSSFSVDAVVFSNEFRHSKFVAYKVKDAVVDYFREK 126 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 RP++ PD+ +++ + +E ++ALD SG+ LH RGYR AP+ E LAA +++ Sbjct: 127 TGNRPSIRISNPDLAIHIHIAEEECTLALDSSGESLHRRGYRQEQVEAPLNEVLAAGMIL 186 Query: 184 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV-KAE 242 +GW+ L+DPMCGSGT+ IEAA++A + APG+ R +GF W D+ ++ + + Sbjct: 187 MTGWRGECDLIDPMCGSGTIPIEAALIARNIAPGVFRKEFGFEKWKDFDQDLFDAIYNDD 246 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 +Q R E++ YG D++ + + A+ N + AG+ + + +++ Q P K Sbjct: 247 SQER------EFTHKIYGYDNNPKANEIAQHNVKAAGVSKDVILKIQPFQQFEQPAQK-- 298 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 +++NPPYGER+ SE L+ L+ ++G +K+ F G + + S + + L+A + Sbjct: 299 -SIIITNPPYGERISSED-LLGLYQMIGERLKHAFTGNDAWILSYRDECFDQIGLKASIK 356 Query: 363 YKAKNGPLDCVQKNYHV 379 NG L+C + Y + Sbjct: 357 VPLFNGALECQFRKYQL 373 >UniRef50_C3JC56 RNA methylase family protein n=2 Tax=Bacteria RepID=C3JC56_9PORP Length = 493 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 144/401 (35%), Positives = 215/401 (53%), Gaps = 17/401 (4%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 ++S A T GLE++L ELE LGA + +V + V F+GD R++Y + R A RI+ P Sbjct: 22 LSSYVAKTLYGLEDVLADELEALGAYDIEVGRRMVRFRGDKRMLYLTNYRLRTALRILKP 81 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + E S DLY ++ W + TF + +D NS+Y + +VKDAI D F Sbjct: 82 IYEFNCESIEDLYETLRQFEWAQYIRCDQTFLIDPVVYSDRFSNSRYVSYRVKDAIADYF 141 Query: 121 TRKNLP---RPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETL 177 N P RP+V D PD+R N+ + + +++LD SGD LH RGY+ + AP+ E L Sbjct: 142 V-ANTPDGKRPSVRMDTPDVRFNIHIAQRHVTLSLDSSGDSLHKRGYKVKQTPAPLSEVL 200 Query: 178 AAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 AA I++++GWQ L+DPMCGSGT IEAA++A A G R ++ F WA D +W+ Sbjct: 201 AAGILLKAGWQGQCDLIDPMCGSGTFAIEAALIARGVAAGAWRTKYAFEEWADFDADLWR 260 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSD--SDARVIQRARTNARLAGIGELITFEVKDVAQLT 295 EV+ + + H Y SD +DA + A N + G+G IT V+ +A Sbjct: 261 EVQEDPNFE-----TPFEHHIYASDIANDAYTVTNA--NVQHMGLGHDIT--VEHMAMQR 311 Query: 296 NPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCL 355 P+ P VL NPPYGERL + L AL+S++G +K+++ G + + + L + Sbjct: 312 RNAPEAPVLMVL-NPPYGERL-TRFDLEALYSMIGSELKHKYTGSKVWIIAPKSKLFHAI 369 Query: 356 QLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYT 396 LR + NG L+C ++Y + E D +AE T Sbjct: 370 GLRHSSRLDLLNGDLECELRSYELFEGKRDDFKRDLAEGKT 410 >UniRef50_Q3SES4 N6-adenine-specific DNA methylase n=2 Tax=Betaproteobacteria RepID=Q3SES4_THIDA Length = 398 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 141/387 (36%), Positives = 209/387 (54%), Gaps = 8/387 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 S FA+ RGLEELL EL GA + + GV F D ++ + SR A+RI+ +G Sbjct: 13 SHFATCPRGLEELLVAELNAAGAQVVRQLPAGVLFIADAAAEMRANLTSRTATRILRKVG 72 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + + +Y + W E F+ T AV N +++ + +K+KDAI D F Sbjct: 73 YTRYKKEEHIYRAALDLPWPEWFDVTKTIAVKVGAQNAPLKSLNFITLKIKDAICDRFRE 132 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + RP+VD ++PD+ V + + + LD SG+ L RG++ A A IKE LAA ++ Sbjct: 133 ETRERPSVDTESPDVPVYAFFTPDAVTFYLDTSGEPLFKRGFKREASAASIKENLAAGLL 192 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 + SGW+PGTPLLDPMCG+GT+L+EAA LA +RAPG R + F + D A+WQ +K E Sbjct: 193 LLSGWEPGTPLLDPMCGAGTILLEAADLALNRAPGRAR-HFAFEHYRDFDAALWQRIKDE 251 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 + K L + +G+D D V+ +AR N +AG + I +V D+ L P P Sbjct: 252 TKA-LEKPLTKLP--IFGADQDRWVLDKARNNLAVAGYADAIELKVSDLLDLK---PPTP 305 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 GT+++NPPYGER+ L + LLG +K F GW+ + S P L + L+A ++ Sbjct: 306 VGTIVTNPPYGERIGEAEDLAEWYPLLGDWLKQNFAGWDAWIISGDPLLPKAIGLKASRR 365 Query: 363 YKAKNGPLDCVQKNYH-VAESTPDSKP 388 NG ++ Y +A S KP Sbjct: 366 IPLFNGQIETRFLQYKLIAGSMKVKKP 392 >UniRef50_A0M2L5 Protein belonging to UPF0020-possibly an RNA methylase n=20 Tax=Bacteroidetes RepID=A0M2L5_GRAFK Length = 386 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 125/380 (32%), Positives = 200/380 (52%), Gaps = 8/380 (2%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 + A T G E +L EL +LGA++ + V F GD +Y++ + R A +I+ P Sbjct: 6 MIAKTLYGFESILAKELLDLGALDIKEGNRMVSFAGDKGFMYKANLCLRTAIKILKPYES 65 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 +V S+ +LY ++ + W + + A+ + ++ +SQY A+K KDAIVD F K Sbjct: 66 FRVNSEQELYDNIKKLPWEKFLADDGSLAIDSAVHSEIFTHSQYVALKSKDAIVDRFREK 125 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 RP+VD D PD+R+N+ + +++ D SGD LH RGYR IAPI E LAA +++ Sbjct: 126 FGKRPDVDLDFPDLRINIHIENNFCNVSFDSSGDSLHKRGYRTATNIAPINEVLAAGMLL 185 Query: 184 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEA 243 SGW LDPMCGSGT+ IEAAM+A + P L+R + F W DE ++++++ A Sbjct: 186 MSGWDGQCDFLDPMCGSGTIPIEAAMIACNIPPNLNRKEFAFEKWNDWDEDLYEKIEESA 245 Query: 244 QTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPY 303 + R ++ G D I +A+ N + A + + I E + + K Y Sbjct: 246 MKKVR----DFHFKIKGYDKAPSAIMKAKDNVKNANLSDFIDIEQRSF--FESEKQKEGY 299 Query: 304 GTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQY 363 +L NPPYGERL E + + +G +K + G + + + + + + LRA ++ Sbjct: 300 LHMLFNPPYGERL--EIDIEDFYGKIGDTLKQNYPGTHAWFIATNFEAIKSVGLRASRKI 357 Query: 364 KAKNGPLDCVQKNYHVAEST 383 K NGPL+ Y + E + Sbjct: 358 KLYNGPLEARLLKYVLYEGS 377 >UniRef50_C8PND5 Putative uncharacterized protein n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PND5_9SPIO Length = 358 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 132/346 (38%), Positives = 192/346 (55%), Gaps = 31/346 (8%) Query: 383 TPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD----- 437 TP P A Y NRL K K +K+AR+ GI YRLYD D+PE VAVD Y + Sbjct: 2 TPSKSPQQAALFY-NRLVKRYKHLKKYARRLGIFAYRLYDRDIPEIPVAVDLYIEDVTGL 60 Query: 438 -WVVVQEYAPPK----TIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQ 492 + V+ EY T K L ++ A + L I+P ++ K R+RQ+G+ QY+ Sbjct: 61 IFAVLTEYERSTDHNYTTKEGKTAASLSELTEALCAALQISPAQVYEKCRKRQRGEAQYE 120 Query: 493 KLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSA 552 K+ + G+ + V E ++N++DYLDTGLFLDHR AR + + + GK LNLF YT S Sbjct: 121 KIADSGKRIIVREGKCRFFINVSDYLDTGLFLDHRPARIAVAESAAGKMVLNLFCYTASF 180 Query: 553 TVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAH-RLIQADCLAWLREA---NEQ 608 +VHA + GAR +VD+S+ YL+WA +N +LNG+ A +Q+D +L +A E+ Sbjct: 181 SVHALVSGARQVCSVDLSKNYLQWAYQNAQLNGVDDPARCTFVQSDVRLFLEQAAKRKER 240 Query: 609 FDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGL 668 +D+I DPPTFSNSKR FDV R L++ ++L A G + FS N R R + L Sbjct: 241 WDIIICDPPTFSNSKRTPQFFDVNRHWQDLIRSCCKVLSAEGVLYFSTNSRTLRFNAAEL 300 Query: 669 A---------------KLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 + + Q+I+ +++ +DF RN++IH W I Sbjct: 301 SDRPSGTAGKDRFVYQNMLFTVQDISAQSIPEDF-RNKKIHRLWKI 345 >UniRef50_A8ZX82 Putative uncharacterized protein n=2 Tax=Desulfobacteraceae RepID=A8ZX82_DESOH Length = 325 Score = 221 bits (564), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 124/310 (40%), Positives = 182/310 (58%), Gaps = 14/310 (4%) Query: 397 NRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKAR 456 NR +K + +K ++ IE +R+YD D+PE VD YA +VV EY ++ Sbjct: 21 NRAKKQYRHLKKRFARQNIEVFRIYDWDIPEIRAVVDWYAGHLVVGEYTRKQSTP----- 75 Query: 457 QRLFDIIAATISVLGIAPNKLVLKTRER-QKGKNQYQKLGEKGEFLEVTEYNAHLWVNLT 515 L + AA L + P K+ LKTR +G+ +Y++L + ++E + +VNL Sbjct: 76 DWLPMMGAAVAEALEVPPAKVHLKTRRTGTQGQKRYERLARTERKIVMSERDFKFYVNLD 135 Query: 516 DYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLE 575 DY+DTGLF DHR RRM+ +M+ GKDFLNLF Y+G+ T +A GGARSTT+VD SRT + Sbjct: 136 DYVDTGLFSDHRDTRRMVREMADGKDFLNLFCYSGTFTCYAARGGARSTTSVDRSRTAIR 195 Query: 576 WAERNLRLNGLTGRAHRLIQADCLAWLREA---NEQFDLIFIDPPTFSNSKRMEDAFDVQ 632 WA N+ LN + + H L+QA +L +A +FDL +DPP+F+ S+ D+ Sbjct: 196 WARENMALNSIPSKGHTLVQAHVFDFLEKAAADARRFDLAIVDPPSFATSRDGAHNMDIV 255 Query: 633 RDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQ 692 +DH L++ L++ GGTI+FS N + F ++ L G+ QEIT T +D+ RNR+ Sbjct: 256 KDHPRLLEMTVALMKPGGTILFSTNHQAFAPRMERLGVAGI--QEITSATTPEDY-RNRK 312 Query: 693 --IHNCWLIT 700 IH CW IT Sbjct: 313 TPIHRCWKIT 322 >UniRef50_C2MBZ0 THUMP domain protein n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MBZ0_9PORP Length = 475 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 130/384 (33%), Positives = 203/384 (52%), Gaps = 13/384 (3%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 + A T GLE +L+ EL LGA Q+ + V ++GD +++Y+S ++ R A +++ P+ E Sbjct: 7 MIAKTLPGLEPVLEQELIALGANNIQIGRRMVSYEGDLKMLYKSNLYLRTALKVLRPIYE 66 Query: 64 CKVYSDLD-LYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 D+D LY + +W++ TFAV + T ++S+Y K KDAIVD F Sbjct: 67 FDA-EDIDILYTTLLHFDWSQWLTADMTFAVDAVVYSSTFKHSRYVVYKTKDAIVDYFRE 125 Query: 123 KN--LPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + RP+V P + ++ + ++ ++ LD SG+ LH RGYR API E LAA Sbjct: 126 QTSGTKRPSVKLSNPQLIFHLHIAEQHVTLCLDSSGESLHKRGYRMEQDRAPINEVLAAG 185 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 I++++GW L+DP CGSGT L+EAA++AT PG++R + F W D + EV Sbjct: 186 ILLKAGWHGQCDLMDPFCGSGTFLVEAALIATGTPPGIYRESYPFERWPDFDSELCSEVY 245 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 + T + H YGSD + I +A+ N +G+ I V D A P P+ Sbjct: 246 NDDSTE-----RSFDYHIYGSDLSPQAIAKAKRNVTRSGMSRYIDLSVGDFADQHLPHPE 300 Query: 301 G---PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 P ++ NPPYGERL S+ L L+S++GR +K QF G + + + + L Sbjct: 301 AETEPKCLLVMNPPYGERL-SDYDLEQLYSMIGRTLKFQFAGAQAWIIAHQVEHFHAIGL 359 Query: 358 RADKQYKAKNGPLDCVQKNYHVAE 381 + D + + NG L C + Y + E Sbjct: 360 KHDLREELYNGSLPCELRGYTLFE 383 >UniRef50_C2D7E0 N6-adenine-specific DNA methytransferase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D7E0_9ACTN Length = 823 Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 125/366 (34%), Positives = 183/366 (50%), Gaps = 59/366 (16%) Query: 392 AEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRY---------------- 435 A + R +K LK+ WA++E + CYR+YDADLP++ ++D + Sbjct: 458 AAQFAARFKKTLKQRGSWAKREDVSCYRVYDADLPDFACSIDMFNAYQPRTTKTATQDGS 517 Query: 436 -ADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQ-- 492 W+ + EY PK ID KA+ RL+D + +L P + + TR + KG +QY Sbjct: 518 AQRWLNISEYKAPKVIDPVKAKLRLYDTLHIASLILQTKPEDVFVHTRMQAKGGSQYHMP 577 Query: 493 ------------------------------KLGEKGEFLEVTEYNAHLWVNLTDYLDTGL 522 + E +E E VN T D G+ Sbjct: 578 QTSNIRKTAHTRDASTTALRNASASPLRKSSMPEGSHLIE--EGGLIFEVNFTARHDCGI 635 Query: 523 FLDHRIARRMLGQMSKG----KDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAE 578 FLD R R + +M+K K FLNLF+YT ++T +A GGA TTTVDMS L+WA+ Sbjct: 636 FLDFREVRNRVREMAKAMKGSKRFLNLFAYTATSTCYAADGGANYTTTVDMSAPTLQWAQ 695 Query: 579 RNLRLNGLTGRAHRLIQADCLAW---LREANEQFDLIFIDPPTFSNSKRME-DAFDVQRD 634 RN+ NG G H I+AD L W +R + ++DLI D PTFSNS +M +DV RD Sbjct: 696 RNMERNGFKGNQHEYIRADVLTWIQDMRHSKNRWDLILCDVPTFSNSNKMHGKTWDVARD 755 Query: 635 HLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIH 694 H+ L+ L RLL G +F N + F ++ + L K G+ +IT T+ DFAR + +H Sbjct: 756 HVELIITLSRLLTRDGKALFCCNLKHFTLNKEALGKAGVVIHDITADTIPFDFARTQNVH 815 Query: 695 NCWLIT 700 + +++T Sbjct: 816 HAYIVT 821 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 95/338 (28%), Positives = 152/338 (44%), Gaps = 20/338 (5%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 FAS G E+LL EL ++ V+ + +QG V F + Y +++RLASRI+ + Sbjct: 12 FFASCPLGFEQLLSRELRSIAPVKTRPLQGRVQFFSTLKDAYTICLYTRLASRIVYVIKH 71 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 LY I W E + G T A+ G N+ + NS + A KVKDA+ DA + Sbjct: 72 IDATDAQTLYQQAAEIPWWEHIDRGTTCAIDAHGTNENLSNSIFSAQKVKDALCDACIKT 131 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAG----IAPIKETLAA 179 RP++D PD+ +++ + K A++ +DLSG+ L RG+ + +A ++ AA Sbjct: 132 QGWRPSIDTHHPDVMISLRIAKNRATLGIDLSGEPLFKRGWEAQKSTQHHLAFLRPDYAA 191 Query: 180 AIVMRSGW-----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEA 234 A++ +S W L+ SGTL IEA A A G +R WGF W H Sbjct: 192 ALLSQSSWYSCVRHEHATLVCAYPQSGTLCIEAVEQALHLACGRNRIHWGFLKWKGHQPD 251 Query: 235 IWQEVKAEAQTRARKGLAEYSSH------FYGSDSDARVIQRARTNARLAGI-GELITFE 287 IW+ + + ++K Y +H + + + + IQ R A + + FE Sbjct: 252 IWENIIEQ----SKKDEQRYQNHRCTLVLYDDTATQRKSIQTIRFMLSRAHVSASRVNFE 307 Query: 288 VKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIAL 325 D + K G ++N + S + A Sbjct: 308 TVDFDEFIQRYTKFSQGQSIANNSNAPHVASNASATAF 345 >UniRef50_Q1DCA8 THUMP domain/methyltransferase domain protein n=2 Tax=Cystobacterineae RepID=Q1DCA8_MYXXD Length = 433 Score = 214 bits (546), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 138/377 (36%), Positives = 199/377 (52%), Gaps = 8/377 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +LFA+ ARG E+LL EL+ LGA + +GGV F +WSR+A R++ PLG Sbjct: 21 ALFATAARGTEDLLADELKELGARRIRQDRGGVRFMATLDEALMVALWSRIAMRVLYPLG 80 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + LY +I W E P TFAV + + +S + A+KVKDAIVD Sbjct: 81 AFEARGAEGLYEAAASIPWEEHLTPEHTFAVDATLKDSEHSHSGFVALKVKDAIVDRMRD 140 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 RP+V+ PDIRV L +ET S++LDL G+ LH RGYR R AP+KETLAAA++ Sbjct: 141 TKGARPDVNTRDPDIRVVAHLARETLSLSLDLCGEPLHRRGYRVRPTPAPLKETLAAAVL 200 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 + + L+DPMCGSGTLLIEA ++A RAPGL+R + W + +E+ A+ Sbjct: 201 RAANYTGTEGLVDPMCGSGTLLIEAGLIARRRAPGLNRD-FAVERWPELGTRA-RELLAD 258 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 + AR+ + G D D ++ A N R A + E I D +L PLP+ Sbjct: 259 MRADARRNERKVEVPLLGFDKDPEALEAASRNVRAARLTEEIQLAEGDATRLP-PLPET- 316 Query: 303 YGTVLSNPPYGERLDS--EPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G +++NPPYG+RL + + + + + LG ++ GW + + +P S R Sbjct: 317 GGLIVTNPPYGDRLGTGGQKGMKSFYFKLGESLR--VPGWRVWVICGNPAFESAFHARPS 374 Query: 361 KQYKAKNGPLDCVQKNY 377 + NGP+ C Y Sbjct: 375 AKRDLWNGPIACSLLGY 391 >UniRef50_A6DTJ8 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTJ8_9BACT Length = 387 Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 132/356 (37%), Positives = 186/356 (52%), Gaps = 13/356 (3%) Query: 19 ELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQA 78 EL+ LGA E Q G+HF D +++ + SRL SR + PL S+ LY V+ Sbjct: 27 ELKELGAQEIQQDYRGMHFHADMVTLFKIVYCSRLFSRFLAPLHRFDALSEDMLYQRVKT 86 Query: 79 INWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIR 138 + W E+ PG TFA+ + N I +S++ A K+KDAI D K RP++D PDI Sbjct: 87 MKWEEIIKPGQTFAIFANVGNSKINHSKFAAQKMKDAICDRLREKRGERPDIDPKNPDIW 146 Query: 139 VNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMC 198 +N++++K A+IALDLSG H RGYR + AP+ E+LAAA + S W TPL DPMC Sbjct: 147 LNLFINKNKATIALDLSGGSHHKRGYRQDSVEAPLMESLAAAFIRASEWDGRTPLYDPMC 206 Query: 199 GSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRAR---KGLAEYS 255 GSGT+L EA M A G R R+GF D IW EVKA+A R + +GL Sbjct: 207 GSGTILAEALMHAARIPAGYLRKRFGFEHMPDFDADIWSEVKAKADARIKLPQEGLIS-- 264 Query: 256 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGER 315 GSD DA ++ + N G+ I L + P T+++NPPYG R Sbjct: 265 ----GSDMDADAVRASIVNLSYLPGGDKIKIIQSRFQDLDDLEP----CTIITNPPYGMR 316 Query: 316 LDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLD 371 L + + + +G +K + G N +F L+ + LR +++ NG LD Sbjct: 317 LMKDEDVESFTGEIGDFLKKKCAGSNAWVFFGERKLILKIGLRPSRKFPLSNGGLD 372 >UniRef50_Q2L074 Putative methylase n=4 Tax=Bordetella RepID=Q2L074_BORA1 Length = 535 Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 127/370 (34%), Positives = 198/370 (53%), Gaps = 11/370 (2%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 +A +GLE+ L E++ LG + Q + G F D + ++ ++SRLA+RI++ +G Sbjct: 156 CYAPCPQGLEDALTAEMQALGFDDAQAGRAGCGFTSDWSGIQRANLYSRLAARILVQVGA 215 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 + + +L ++ W F P T V S + + + QY ++VKD I D + Sbjct: 216 GNLNHEDELLDLAYSVPWENWFGPEDTLRVDTSAIKSPVHSLQYCNLRVKDGICDRLRDR 275 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 RP++D PD RV +++ A++ LD SG+ L RG+R G AP++E LAA ++ Sbjct: 276 EGARPSIDTVRPDARVQLFMEGTHATLYLDTSGESLFKRGWRLDKGEAPLRENLAAGMLA 335 Query: 184 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEA 243 +GW P PLLDP CGSGT+LIEAA +A PG+ R +GF QHD W+++K +A Sbjct: 336 LAGWDPSAPLLDPFCGSGTILIEAAWIALGVPPGISRP-FGFERMRQHDARRWRDLKDDA 394 Query: 244 QTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIG-ELITFEVKDVAQLTNPLPKGP 302 ++R R L + G D D R I+ AR NA A + E I FEV D + P + Sbjct: 395 RSRIRTQL---ETPLIGYDIDERAIEFARANAERAWLTEETIRFEVGDARHVKAPASQ-- 449 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 G +++NPPYGER++ S +K++F GW + S+ L ++L+ ++ Sbjct: 450 -GWIVTNPPYGERMEIADDFWREWSA---CLKHEFAGWQAHIISSDMKLPQRMRLKPVRR 505 Query: 363 YKAKNGPLDC 372 NG LDC Sbjct: 506 IPLHNGSLDC 515 >UniRef50_Q26FC8 N6-adenine-specific DNA methylase n=20 Tax=Bacteroidetes RepID=Q26FC8_9BACT Length = 388 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 123/380 (32%), Positives = 203/380 (53%), Gaps = 10/380 (2%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 + A T GLEE+L+ EL LGA + V F+GD +Y++ M R A RI++P+ Sbjct: 7 MIAKTLFGLEEVLEKELRQLGATRIEKGVRMVSFEGDLGFMYKANMMLRTAIRILVPIHS 66 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 + +++DLY G+ ++W++ T AVH + + +SQY A+K KDAIVD Sbjct: 67 FRARNEVDLYDGIYQMDWSQYLTAHDTLAVHGTVASQYFNHSQYVALKTKDAIVDQIRNN 126 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 RP+VD PD+R++V ++ + +++D SG+ L RGYR IAPI E LAA +++ Sbjct: 127 TGRRPDVDTKHPDLRISVHINDQKVDVSIDSSGEPLFKRGYRQETNIAPINEVLAAGLIL 186 Query: 184 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEA 243 S W + +DPMCGSGT+ IEAAM+A + AP L+R +GF W +D A+++ + Sbjct: 187 LSDWDQRSQFIDPMCGSGTIAIEAAMIAANIAPNLNRPEFGFEKWPNYDNALFEMI---- 242 Query: 244 QTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPY 303 Q K + E+ D+D +++A+ N + A + + I E D + + Sbjct: 243 QESCLKKMREFEGPIIARDADGYTLEKAKENVKNANLQDFIKLEKGDFFRDH----QSAQ 298 Query: 304 GTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQY 363 ++ NPPY ER++ + A + +G +K ++ G + + + D L + LR ++ Sbjct: 299 AFLMFNPPYDERIEIDTD--AFYKSIGDALKQRYTGSTAWMITGNLDALKSVGLRPSRKI 356 Query: 364 KAKNGPLDCVQKNYHVAEST 383 K NG L+ Y + T Sbjct: 357 KVYNGKLEARFVKYEMYRGT 376 >UniRef50_A0Q0L2 Nucleic acid methylase n=6 Tax=Clostridiales RepID=A0Q0L2_CLONN Length = 384 Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 126/376 (33%), Positives = 204/376 (54%), Gaps = 12/376 (3%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 L A++A G+E L+ EL+ LG +V G V + GD + +S +W R A R+ + L E Sbjct: 6 LVATSAFGIEGLVSKELKRLGYKNLKVENGKVTYNGDEECICKSNLWLRCADRVYIKLAE 65 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 K + DL+ G + I W+ A F V+ + T+ + K AIV+ + Sbjct: 66 FKATTFEDLFQGTKRIPWSNFLPEDANFIVNAKSVKSTLFSLSDIQSICKKAIVENLKEE 125 Query: 124 -NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 N+ + I +++ L+ E ++ LD SGD LH RGYR++ +AP+KETLAAA+V Sbjct: 126 YNVEWFSESGSVYPILISI-LNDEV-TVLLDTSGDALHKRGYREKGSLAPLKETLAAALV 183 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAI-WQEVKA 241 + S W+ +DP CGSGT+ IEAAM+A + APGL+R + W ++ W++V+ Sbjct: 184 ILSNWRYDRLFIDPFCGSGTIPIEAAMIARNIAPGLNR-TFACENWDFIISSLTWKKVRK 242 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 EA + + H +G D D+++I AR NA AG+ + I F+ + V +L+ Sbjct: 243 EAYEAI---MYDKEYHIFGYDKDSKIIPVARENAVKAGVDDCIHFQTQPVQELSTHY--- 296 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 YGT++ NPPYGERL+ + + AL+ +G++ ++F W+ + ++ D C ++DK Sbjct: 297 NYGTIVCNPPYGERLNEKDEVEALYRDMGKVF-SKFDTWSKFVITSYSDFEKCFGKKSDK 355 Query: 362 QYKAKNGPLDCVQKNY 377 K NG + C Y Sbjct: 356 NRKLYNGRIQCYYYQY 371 >UniRef50_Q898M5 Methyltransferase n=2 Tax=Bacteria RepID=Q898M5_CLOTE Length = 380 Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 125/390 (32%), Positives = 205/390 (52%), Gaps = 20/390 (5%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +L A+ GLE+++ EL LG + + G V F+G + MW R A R+++ + Sbjct: 4 TLIATATFGLEKVVADELRELGYEDLIIENGKVTFQGSEMDIVTCNMWLRTADRVLIKMA 63 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMK----VKDAIVD 118 E K S +L+ G + W ++ P F +H +G ++++ + K A+V+ Sbjct: 64 EFKAESFEELFQGTLKVEWGDII-PETGF-MHVTG--KSVKSKLFSVPDCQSITKKAVVE 119 Query: 119 AFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLA 178 + RK + D ++ V + K+ ++ LD +G GLH RGYR+ AG AP+KETLA Sbjct: 120 SMKRK-YNKEMFSEDGATYKIEVAILKDIVTLTLDTTGPGLHKRGYREFAGEAPLKETLA 178 Query: 179 AAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 AA+V+ S W+P L DP CGSGT+ IEAAM+ + APGL+R + W + +WQ+ Sbjct: 179 AALVLLSKWEPSRILADPFCGSGTIPIEAAMIGKNIAPGLNRN-FVSEDWDIIPKNLWQD 237 Query: 239 VKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 ++ AR + + SD + RV++ AR NA AG+ + I F+ D+ + N Sbjct: 238 MRK----YARNSINDKEFRILASDINGRVLKTARDNAEKAGVADYIAFQRMDMKEFRN-- 291 Query: 299 PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 K YG +++NPPYGER+ + + L+ +GR + + W+ + ++ D +C + Sbjct: 292 -KKRYGFIITNPPYGERIGNAKEVENLYEDMGRTFQ-ELKDWSYFVITSYEDFENCFGEK 349 Query: 359 ADKQYKAKNGPLDCVQKNYHVAESTPDSKP 388 +DK K NG + C Y AE P+ P Sbjct: 350 SDKNRKLYNGRIKCYYYQYFGAE--PEKNP 377 >UniRef50_A6GTU6 Probable oxidoreductase n=1 Tax=Limnobacter sp. MED105 RepID=A6GTU6_9BURK Length = 441 Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 132/387 (34%), Positives = 199/387 (51%), Gaps = 18/387 (4%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 + FAS RGLEE+L ELE++GA + + V GG F+ R + W+R A RI L L Sbjct: 31 NCFASCPRGLEEILVAELESMGAQKTRAVTGGCTFEASWRQATRMTYWTRFAGRIGLELA 90 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + S+ + Y ++++W F TF V + L I++ ++ +++KDA+ DAF Sbjct: 91 RGECTSEDEFYHIAKSVDWHNWFKLSNTFRVDLNNLGADIQSVRFTQLRLKDAVCDAFLE 150 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI- 181 + RPN+ +APD+R+ ++ A + +DL+G+ L RG+R+ AG+AP+KE LAA + Sbjct: 151 RFDERPNISVEAPDVRIFAAINPTEAMVYIDLAGENLFKRGWREEAGVAPLKENLAAGLW 210 Query: 182 -VMR--SGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 + R + LDP CGSGTL+IE+ DRAPGL R + F +E Sbjct: 211 HIARQSEAGKNADVFLDPFCGSGTLVIESLSQLCDRAPGLERA-FAFENLKPFTPEWGKE 269 Query: 239 VKAEAQTRARKGL--AEYSSHF--YGSDSDARVIQRARTNARLAGIGELITFEVKDVAQ- 293 ++ +A R GL A + +F Y SD +I A+ N AG EL+ + AQ Sbjct: 270 LQEDANRRFNAGLDKALTTPYFQWYASDITELLIDIAQENLARAGFEELLDAGIVQFAQR 329 Query: 294 -LTNPLPKGPYGTVLSNPPYGERLDSEPALIA-------LHSLLGRIMKNQFGGWNLSLF 345 P P G V SNPPYGER+ ++ A + L G +K F GW LF Sbjct: 330 DALTVEPPSPSGIVFSNPPYGERVRAKGADVPEDEAYERLFKAYGDHLKMNFSGWTAFLF 389 Query: 346 SASPDLLSCLQLRADKQYKAKNGPLDC 372 S ++ L L ++ NGP++C Sbjct: 390 SGDLEIKKTLGLSPKRKRPLFNGPIEC 416 >UniRef50_Q7P2H5 METHYLTRANSFERASE n=10 Tax=Fusobacterium RepID=Q7P2H5_FUSNV Length = 379 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 122/378 (32%), Positives = 195/378 (51%), Gaps = 15/378 (3%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 AST GLE ++K E LG +V G V F+GD + + ++ ++ R + RI + + E Sbjct: 3 FIASTTMGLESIVKDECLGLGFKNIKVFDGRVEFEGDFKDLVKANIYLRCSDRIFIKMAE 62 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKV----KDAIVDA 119 K + +L+ +++INW + + F + + ++++ Y + K AIV+ Sbjct: 63 FKALTYEELFQNIKSINWQDYIDEDGEFPISWVS---SVKSKLYSKSDIQRISKKAIVEK 119 Query: 120 FTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAA 179 K R + + + HK+ + LD SG+ L RGYR + +APIKETLAA Sbjct: 120 LKEK-YKREIFLENGALYSIKIQCHKDIFIVMLDSSGEPLTKRGYRAQKRVAPIKETLAA 178 Query: 180 AIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 A+V S W+ LLDPMCG+GT+ IEAAM+A + APG +R + W+ D+ +W ++ Sbjct: 179 ALVYLSKWKADEVLLDPMCGTGTITIEAAMMARNIAPGANRN-FAAEKWSIIDKNLWTDI 237 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 + EA + + L++ Y SD D R I+ A+ NA AG+ E I F+VKD + +P Sbjct: 238 RDEAFS--NEDLSK-ELKIYASDIDKRSIEIAKENAEKAGVEEDIIFDVKDFKDIESP-- 292 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 YG ++ NPPYGERL + + L+ G K + W+ + ++ D +A Sbjct: 293 -AKYGAMIVNPPYGERLMGDEDIEKLYRNFGDFCKKKLSKWSYYIITSYEDFEKAFDKKA 351 Query: 360 DKQYKAKNGPLDCVQKNY 377 K K NG + C Y Sbjct: 352 TKNRKLYNGGIKCYYYQY 369 >UniRef50_C1CIN4 Methyltransferase n=129 Tax=Bacilli RepID=C1CIN4_STRZP Length = 385 Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 125/371 (33%), Positives = 195/371 (52%), Gaps = 12/371 (3%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +L A+ A GLE ++ E+ LG +CQV G V F+GD R + ++ +W R A RI + +G Sbjct: 6 NLIATVAAGLEAVVGREVRELG-YDCQVENGRVRFQGDVRAIIETNLWLRAADRIKIIVG 64 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + +L+ GV A++W GA F + + + +++ + V + Sbjct: 65 TFPAKTFEELFQGVFALDWENYLPLGARFPISKAKCVKSKLHNEPSVQAISKKAVVKKLQ 124 Query: 123 KNLPRPN---VDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAA 179 K+ RP + + P+ ++ V + K+ A++ +D +G L RGYR G APIKE +AA Sbjct: 125 KHYARPEGVPLMENGPEFKIEVSILKDVATVMIDTTGSSLFKRGYRTEKGGAPIKENMAA 184 Query: 180 AIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 AI+ S W P PL+DP CGSGT IEA M+A APGL R + F W + + QEV Sbjct: 185 AILQLSNWYPDKPLIDPTCGSGTFCIEAVMIARKMAPGLRRS-FAFEEWNWISDRLIQEV 243 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 + EA A+K E G D DAR+++ A+ NA+ AG+ ITF+ V L + Sbjct: 244 RTEA---AKKVERELELDIMGCDIDARMVEIAKANAQAAGVAGDITFKQMRVQDLRSDKI 300 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 G ++SNPPYGERL + + L++ +G++ W+ + ++ S +A Sbjct: 301 N---GVIISNPPYGERLSDDAGVTKLYAEMGQVFA-PLKTWSKFILTSDEAFESKYGSQA 356 Query: 360 DKQYKAKNGPL 370 DK+ K NG L Sbjct: 357 DKKRKLYNGTL 367 >UniRef50_A8FEF3 Site-specific DNA-methyltransferase (Adenine-specific) n=14 Tax=Bacilli RepID=A8FEF3_BACP2 Length = 384 Score = 204 bits (520), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 122/367 (33%), Positives = 189/367 (51%), Gaps = 10/367 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +L A+ G+E ++ E+ +LG +C V G V F+GD + ++ +W R A RI + + Sbjct: 5 TLIATAPMGIEAIVAKEVRDLG-YDCTVDNGKVIFEGDALAICRANLWLRTADRIKVQVA 63 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF-T 121 E + +L+ +AI+W +TF V + + + VK AI + Sbjct: 64 EFSAKTFDELFERTKAIDWAAFLPKNSTFPVIGKSVKSQLASVPDCQRIVKKAIAQKLIS 123 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 N+ ++ P+ ++ V L K+ A + LD SG GLH RGYR G APIKETLAAA+ Sbjct: 124 SYNIQSEWLEETGPEYKIEVALLKDKAVLTLDTSGVGLHKRGYRMDQGGAPIKETLAAAL 183 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 V+ + W P P +DP CGSGT+ IEAAM+ + APG +R + W E +W + + Sbjct: 184 VLLTNWTPDRPFVDPFCGSGTIAIEAAMIGQNIAPGFNRD-FASESWEWIGEDVWNKARH 242 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 E + +A + H SD D R+I A+ NA AG+ ELI F+ V K Sbjct: 243 EVEEKAN---YDQPLHIIASDIDHRMIDIAKMNAEEAGLSELIEFKQMQVKDFQT---KV 296 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 YG ++ NPPYGERL +PA+ ++ +G K+ W++ + ++ C +A K Sbjct: 297 DYGVIVGNPPYGERLSDKPAVEKMYQGMGEAFKS-LDTWSIYILTSHEKFEECFGRKATK 355 Query: 362 QYKAKNG 368 + K NG Sbjct: 356 KRKLFNG 362 >UniRef50_Q9KC03 BH1771 protein n=3 Tax=Bacillales RepID=Q9KC03_BACHD Length = 385 Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 120/371 (32%), Positives = 195/371 (52%), Gaps = 18/371 (4%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +L A+ GLE L+ E+++LG + +V G V F D + ++ +W R A R+ L +G Sbjct: 5 TLIATATMGLEALVAREVKDLGYEDVKVENGKVTFTSDVAAIPRANLWLRTADRVKLKVG 64 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 E K + +L+ +++ W ++ A F V + + + VK A+V++ + Sbjct: 65 EFKALTFDELFEKTKSLPWADIIPVHAEFPVIGRSVKSKLFSVSDCQAIVKKAVVESM-K 123 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 K R D + P R+ V LHK+ A++ +D SG GLH RGYR AP+KETLAAAI+ Sbjct: 124 KRYKRGWFDENGPLYRIEVALHKDIATLTIDTSGTGLHKRGYRYLHSQAPLKETLAAAII 183 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 M S W+ P DP CGSGT+ IEAAM+ + APG +R + W + +E Sbjct: 184 MLSHWKSDRPFADPFCGSGTIPIEAAMIGQNIAPGFNR---------EFVSEQWHWIGSE 234 Query: 243 AQTRARKGLAEYSSH-----FYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 RAR+ + + +++ GSD D R+++ A+ NA AG G+LI+F+ Q+T+ Sbjct: 235 HWDRAREEVEDMANYDQPLDILGSDIDHRMVELAQNNAMEAGFGDLISFK---QMQVTDF 291 Query: 298 LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 K YG ++ NPPYGER+ + ++ +G + + W++ + ++ Sbjct: 292 RHKEEYGILIGNPPYGERIGEREEVEKMYQKMGEVFREHLETWSIYILTSHEGFEELYGK 351 Query: 358 RADKQYKAKNG 368 RA K+ K NG Sbjct: 352 RATKKRKLYNG 362 >UniRef50_C0QBT1 Putative RNA methylase family protein n=2 Tax=Deltaproteobacteria RepID=C0QBT1_DESAH Length = 403 Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 123/373 (32%), Positives = 186/373 (49%), Gaps = 15/373 (4%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 + F A L + EL+ LGA + G++FK + Y+ +RL SRI+ PL Sbjct: 33 TFFGQIAEDLINEGEAELKQLGATDVTPSFRGIYFKAEKETFYRINYQTRLFSRILAPLT 92 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + LY + I W +F +TFA+ + + I +SQY +++KDAI D F Sbjct: 93 SFACNNTDTLYKQAKKIKWENLFKKKSTFAITSNVSDSEITHSQYAGLRLKDAIADYFRE 152 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + RP+V+ PD+ +N+ + KETA I++D SG LH RGYR+ + AP++ET+AAAI+ Sbjct: 153 RTGKRPDVNTLDPDVMINLHIRKETADISIDASGGALHKRGYREESVTAPMQETIAAAII 212 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 SGW PL DPMCGSGTLL EA M G+ R R+GF + +W +VK E Sbjct: 213 RISGWDGTRPLYDPMCGSGTLLCEALMHQCHIPAGIFRQRFGFEILPDFNPDLWNQVKTE 272 Query: 243 AQTRARKGLAEYSSHFY-GSDSDARVIQRARTN---ARLAGIGELITFEVKDVAQLTNPL 298 A G+ + GSD + ARTN G ++ + + + L + + Sbjct: 273 ANA----GIIPIAQGLIAGSDIAESSVTAARTNLMGLHNGGQVSVLNMDFRQIQALEDTI 328 Query: 299 PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 +++NPPYG R+ E L H LG +K + G ++ P + + L+ Sbjct: 329 -------IVANPPYGIRMGKESDLKVFHRELGDFLKQRCKGSTAYIYFGDPQYVGHMGLK 381 Query: 359 ADKQYKAKNGPLD 371 A + K G LD Sbjct: 382 ATWKRPLKAGGLD 394 >UniRef50_A6T245 N6-adenine-specific DNA methylase n=9 Tax=Betaproteobacteria RepID=A6T245_JANMA Length = 406 Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 126/386 (32%), Positives = 191/386 (49%), Gaps = 24/386 (6%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQV-----VQGGVHFKGDTRLVYQSLMWSRLASR 56 +S F RGLE L EL + ++ + V GGVH G + Y+ + SR+ASR Sbjct: 5 HSYFCPCPRGLEIALAEELNEIALLDKTLKVHTQVPGGVHCSGTLQDAYRINLHSRIASR 64 Query: 57 IMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAI 116 +++ + ++ D+Y A W + F T + + + +R+ ++ +K+KDAI Sbjct: 65 VLMRMAHASYTTENDIYDLTLAQAWEDWFEVDHTIRIDVTAIKSPLRSLEFTTLKIKDAI 124 Query: 117 VDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKET 176 D F RP+VD PD+R+ +L T ++ LD SG+ L RG+R G AP++E Sbjct: 125 CDRFRDIYNRRPSVDTKMPDMRIVGFLDARTFTLYLDTSGEALFKRGWRMETGDAPLREN 184 Query: 177 LAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 LAA ++ SGW+PG L DPMCGSGT+L EAA + PGLHR + F +A +A W Sbjct: 185 LAAGLLRTSGWKPGMTLFDPMCGSGTILAEAAQMLAGIPPGLHRD-FAFEKFAGFSKAEW 243 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEV--KDVAQL 294 +KA + +GSD ++ R N AG I FEV K + Sbjct: 244 AAIKASVKPNPLPA----EPTIFGSDISGDMVAMTRNNLNKAG----IRFEVPLKQIEAQ 295 Query: 295 TNPLPKGPYGTVLSNPPYGERL--------DSEPALIALHSLLGRIMKNQFGGWNLSLFS 346 P G +L+NPPYGER+ +++ S G +K +F GW + LF+ Sbjct: 296 EVKAPSETPGVLLTNPPYGERIGVRGDSTVEADDMAKEFFSAFGTTLKQRFAGWKVFLFT 355 Query: 347 ASPDLLSCLQLRADKQYKAKNGPLDC 372 A L L+L+ ++ NG L+C Sbjct: 356 ADLGLPKLLRLKEARKTPFFNGALEC 381 >UniRef50_UPI000169A05C hypothetical protein Epers_10695 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI000169A05C Length = 302 Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 113/261 (43%), Positives = 156/261 (59%), Gaps = 12/261 (4%) Query: 387 KPAMVAEDYTNRLRKNLKKFEKWAR----QEGIECYRLYDADLPEYNVAVDRYADWVVVQ 442 +P + +TNRLRKN + + KWAR + P A+D Y + Q Sbjct: 24 QPVNNFDAFTNRLRKNQRHWRKWARPGAASAATASMIVTSRSFP---WAIDWYEGHLHAQ 80 Query: 443 EYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLE 502 +A + ++ +R I A SV+ + ++L KTR RQ+G QYQK G +G + Sbjct: 81 LFARKGIEEPSESEERA--IADALSSVMEVPADRLAFKTRRRQRGLTQYQKTGRQGRLMI 138 Query: 503 VTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGAR 562 V E V+L YLDTGLFLDHRI R M+ + + GK FLNLF+YTGS +V+A GGA Sbjct: 139 VQEAGLRFEVDLHSYLDTGLFLDHRITRSMVREQAAGKRFLNLFAYTGSFSVYAAAGGAE 198 Query: 563 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREAN---EQFDLIFIDPPTF 619 ++ TVD+S TY EW++RNL+LNG HRL +AD +L +A E+FDLI +DPP+F Sbjct: 199 ASLTVDLSNTYQEWSQRNLQLNGFGYPRHRLQRADVFEFLIQAERKRERFDLIVLDPPSF 258 Query: 620 SNSKRMEDAFDVQRDHLALMK 640 SNSKRM++ DVQRDH L++ Sbjct: 259 SNSKRMQEVLDVQRDHARLIE 279 >UniRef50_C5AB46 Predicted N6-adenine-specific DNA methylase n=3 Tax=Burkholderia RepID=C5AB46_BURGB Length = 435 Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 128/391 (32%), Positives = 191/391 (48%), Gaps = 32/391 (8%) Query: 31 VQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGAT 90 V GGVHF+G + + SR+ASR++L + + S+ D+Y W F T Sbjct: 43 VPGGVHFRGGWMAGMAANLHSRIASRVLLKIADRPYRSEQDVYALALEQQWERWFAATQT 102 Query: 91 FAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASI 150 V + + +++ ++ ++VKDAI D K RP++D PD+RV +L ++ Sbjct: 103 LRVDVTAIKSPLKSLEFATLRVKDAICDRLREKTGARPSIDTAQPDVRVFAFLTATHCTL 162 Query: 151 ALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAML 210 LD SG+ L RG+R G AP++E LAA I+ +GW P PL DPMCGSGT L EAA + Sbjct: 163 YLDTSGEPLFKRGWRLDKGAAPLRENLAAGILRVAGWTPAVPLYDPMCGSGTFLAEAAQI 222 Query: 211 ATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSS-HFYGSDSDARVIQ 269 A D APG+ R R+GF Q+D WQ +K A R +++ YGSD ++ Sbjct: 223 ALDVAPGVER-RFGFEKLKQYDITAWQTLKVAAMDAKRAARGRHAALPVYGSDISGDMLD 281 Query: 270 RARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLD------------ 317 +AR N AG+ + +V A+ P P G +++NPPYGER++ Sbjct: 282 KARANLERAGVPAISLKQVD--ARFMAP-PTDTPGLIVANPPYGERIEVRGRGPRGDARE 338 Query: 318 ------SEPALIALHS---------LLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 ++ A H+ LG +K +F GW L S+ L L+LR + Sbjct: 339 TGRNRGNDDAFRRTHTDAPDGEFFIALGNALKQRFAGWQAFLLSSDRSLPGQLRLRESAK 398 Query: 363 YKAKNGPLDCVQKNYHVAESTPDSKPAMVAE 393 NG L+C + V + +PA AE Sbjct: 399 TPLFNGALECRLFRFDVVAGSVRQRPAQGAE 429 >UniRef50_Q11Q19 RNA methylase family protein n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11Q19_CYTH3 Length = 392 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 118/382 (30%), Positives = 190/382 (49%), Gaps = 5/382 (1%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 + + + A L EL E+ NL Q++ G+ +G + M R A++++ L Sbjct: 8 SDILITCAPDLSELTGREINNLAIPIKQILPHGIVVEGTAQTAMYLCMHLRTANKVLFLL 67 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 E K + DLY + I W F+ + F++ N TIR++++ +K KDAI D F Sbjct: 68 KEAKAATPDDLYRVAKNIPWDNFFDNTSYFSIDSFVQNSTIRDTRFANVKCKDAIADYFV 127 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 K RP+ + + ++ + SI LDLSG+ + GYR AP+ ETLAA + Sbjct: 128 EKTTKRPDSGPLRDKVVIFIYWRENDLSIYLDLSGEPISRHGYRLNPWKAPMAETLAAGV 187 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 ++ S W P TP ++PMCGSGTL IEAA++ T + PGL R + F + W+ ++ Sbjct: 188 IITSEWNPTTPFINPMCGSGTLAIEAALIGTHKIPGLVREDYAFQHIHGYVAETWKTMRE 247 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 AQ +K L SD D R + A+ NA AG+ LI F + D P+ + Sbjct: 248 MAQ---QKVLPALPFKIIASDHDQRALDAAKVNAEKAGVDHLIDFVLSDFQD--TPVEEN 302 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 G V+ NP YGERL E +L+ + +G K + GG+ +F+ + +L + L+ + Sbjct: 303 QAGVVILNPEYGERLGDEESLVLTYKEIGDFFKQKCGGYKGFVFTGNLELAKRIGLKPKR 362 Query: 362 QYKAKNGPLDCVQKNYHVAEST 383 + K + ++C Y + T Sbjct: 363 KIKFFSAKIECRLMQYELYSGT 384 >UniRef50_C6X0X4 Methyltransferase n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X0X4_FLAB3 Length = 389 Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 116/376 (30%), Positives = 193/376 (51%), Gaps = 9/376 (2%) Query: 8 TARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVY 67 T GLEE+L E+ LG ++ V+ +GD +Y+ +R A +I++P+ K + Sbjct: 12 TFFGLEEILAEEIRKLGGANVEIKNRAVNCEGDLGFLYKINYSARTALKILIPVLTFKAW 71 Query: 68 SDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPR 127 + Y + W + + TFA+ + ++ ++SQ+ + K+KDAIVD F K+ R Sbjct: 72 DESRFYDKLFDFPWDDYMSVDQTFAIDATVYSERFKHSQFMSQKMKDAIVDYFKFKHRKR 131 Query: 128 PNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGW 187 P+V+ PDI+ ++ + +E +I++D +GD L RGYR G API E LA+ ++ +GW Sbjct: 132 PDVNTIDPDIKFHLHIDRELVTISMDSAGDALFKRGYRKEQGEAPINEVLASGMLQLAGW 191 Query: 188 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRA 247 LDPMCGSGTLLIEAAM+A D + R ++ F W +DE ++Q++K R Sbjct: 192 DGKGNFLDPMCGSGTLLIEAAMIAMDLPAQIFRKKFAFQNWKNYDEELFQKIKEVRINRV 251 Query: 248 RKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVL 307 + E++ G D D++++ N A + ++I + +D + L P V Sbjct: 252 K----EFTGKIVGYDVDSQMLNAVHLNIEAAEMEDVIEVKNQDFFESKKEL--FPLLMVF 305 Query: 308 SNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKN 367 NPPY ER++ E + +G K + S+ D + LR ++ K N Sbjct: 306 -NPPYDERIEIEDD--EFYKKIGDTFKKNYPNTLAWFISSDLDAAKKVGLRPSRRIKLYN 362 Query: 368 GPLDCVQKNYHVAEST 383 G L+C + + E T Sbjct: 363 GKLECRFLQFEMYEGT 378 >UniRef50_D1RAW3 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RAW3_9CHLA Length = 383 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 129/370 (34%), Positives = 194/370 (52%), Gaps = 14/370 (3%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFK-GDTRLVYQSLMWSRLASRIMLPLG 62 LF + ++GLE LL EL+ L GV K D +Y+ SR+ASR++ PL Sbjct: 11 LFVTCSQGLEPLLIEELQELSFENAHPGFRGVFVKIKDLSDIYRINYNSRIASRVLFPLT 70 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 Y LY G NW F G TFA+ + + IRNS + A VKDAI D Sbjct: 71 TFNCYDQKALYRGASQFNWIPFFRKGMTFAIDSNVNHRLIRNSLFAAQVVKDAICDQLRE 130 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 K RPN+D PDI++N+++ TA ++LD SG LH RGYR + AP++E LAAAI+ Sbjct: 131 KFGERPNIDVKNPDIQLNLFIQGNTAILSLDTSGAPLHKRGYRLDSVEAPMQENLAAAIL 190 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 + ++ + DP CGSGTLLIEAA++A+ PG R WGF + + + W +VK E Sbjct: 191 RLANYKKEEIMCDPCCGSGTLLIEAALMASQTPPGFLRKDWGFMRFPEFSASDWLKVKME 250 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 A + R+ + + H +G + + ++ ++TN R AG I D + T P Sbjct: 251 ADQK-RQPIPK--GHLFGVEINKNAVRVSKTNIRAAGFLSEIEVVQGDFREWT---PSVL 304 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFG----GWNLSLFSASPDLLSCLQLR 358 +++NPP+G+RLD L L+ +G MK + G+ +F+ + DL + L Sbjct: 305 PTLLVTNPPHGKRLDFAEDLRPLYRSIGDFMKQKMAKPARGF---VFTGNLDLTKEVGLA 361 Query: 359 ADKQYKAKNG 368 A +++ +G Sbjct: 362 AKRRHVLHSG 371 >UniRef50_C0YIG9 Probable methylase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YIG9_9FLAO Length = 388 Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 119/376 (31%), Positives = 191/376 (50%), Gaps = 9/376 (2%) Query: 8 TARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVY 67 T GLE++L E++ LG ++ V+ +GD +Y+ +R A +I++P+ E K + Sbjct: 12 TFFGLEQILAEEIKKLGGRNVEIKNRAVNCEGDLGFLYKINYSARTALKILVPIHEFKAF 71 Query: 68 SDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPR 127 + Y + W + +F++ + ++T ++SQ+ +K+KDAIVD F K R Sbjct: 72 NQHQFYDRLFKFEWDNFMDVDQSFSIDATVNSETFKHSQFVTLKMKDAIVDYFQEKFKRR 131 Query: 128 PNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGW 187 PNV+ PDI+ ++ + +E I++D SGD L RGYR G API E LA+ ++ +GW Sbjct: 132 PNVETRNPDIKFHLHIDRELVMISMDSSGDPLFKRGYRREQGEAPINEVLASGMLQLAGW 191 Query: 188 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRA 247 LDPMCGSGTLLIEAAM+A D + R R+GF W +D ++ ++K R Sbjct: 192 DGKGNFLDPMCGSGTLLIEAAMIAMDLPAQIFRKRFGFQNWNNYDADLFAKIKEFRINRV 251 Query: 248 RKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVL 307 + ++ G D DAR++ AR N A + ++I E+K + P V Sbjct: 252 K----QFDGKIVGYDIDARMLNAARMNVEAAEMEDVI--EIKKQNFFDSKKELFPLLMVF 305 Query: 308 SNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKN 367 NPPY ER+ + +G K + L S+ + + + LR ++ K N Sbjct: 306 -NPPYDERISINDD--DFYKKIGDTFKTNYPNTLAWLISSDLEAVKKIGLRPSRKIKLFN 362 Query: 368 GPLDCVQKNYHVAEST 383 G L+ Y + E T Sbjct: 363 GKLETRFLQYEMYEGT 378 >UniRef50_A6EAV4 Predicted N6-adenine-specific DNA methylase n=5 Tax=Sphingobacteriales RepID=A6EAV4_9SPHI Length = 393 Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 116/332 (34%), Positives = 175/332 (52%), Gaps = 5/332 (1%) Query: 52 RLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMK 111 R AS+I+ L K + +LY + + W E+ + F+V + N TI + +K Sbjct: 58 RCASQILYCLKSFKANNPEELYQELVQMPWEELIDFAGYFSVTSNVDNPTITTPLFANLK 117 Query: 112 VKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIA 171 VKDAIVD K RPN DA V+++ A I LD SG+ L GYR G A Sbjct: 118 VKDAIVDRIKDKKGIRPNSGSDANKAVVHLYWKDSEADIFLDTSGETLAKHGYRKIPGKA 177 Query: 172 PIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQH 231 P+ E LA++++ +GW +P ++PMCGSGTL IEAA++AT+R PGL+R +GF + Sbjct: 178 PMLEALASSVIFSTGWDQKSPFVNPMCGSGTLAIEAALIATNRRPGLYRMNYGFMHILGY 237 Query: 232 DEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDV 291 DE ++ AE + + + +D + +R NA+ AG+ LI+FEV D Sbjct: 238 DEEVFF---AERRILKEQVVKNTDIQIIATDISEDAVDVSRKNAKTAGVDGLISFEVCDF 294 Query: 292 AQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDL 351 A +P+G G V+ NP YGERL L + +G MK G++ +F+ +PDL Sbjct: 295 ADTV--VPEGGRGVVIFNPEYGERLGVHSKLELTYKRMGDFMKQHCKGYSGYIFTGNPDL 352 Query: 352 LSCLQLRADKQYKAKNGPLDCVQKNYHVAEST 383 + L+A ++ + NG LDC Y + + T Sbjct: 353 AKKIGLKAARKIEFYNGKLDCRMLEYELYDGT 384 >UniRef50_B1CAN9 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CAN9_9FIRM Length = 375 Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 127/382 (33%), Positives = 204/382 (53%), Gaps = 15/382 (3%) Query: 1 MNSL--FASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIM 58 MN+L A+ GLE++LK E+ +LG +V G V+FKG+ + V + + R A R++ Sbjct: 1 MNNLTIVATCTFGLEKVLKREVTDLGYEIDKVEDGKVYFKGNKKDVMNANLHLRTAGRVL 60 Query: 59 LPLGECKVYSDLDLYLGVQAINWTEMFNPGATF-AVHFSGLNDTIRNSQYGAMKVKDAIV 117 + + YS DL+ V++ W ++F A F A S + + + + VK AIV Sbjct: 61 IFITTFDAYSFDDLFDNVESYPWEDIFEKNAGFNATKISSVKSKLFSKRDIQKIVKKAIV 120 Query: 118 DAFTRK-NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKET 176 + RK L + + ++ VN+ K+ SI ++ SG GLH RGYR+ A AP+KET Sbjct: 121 ERLKRKYKLNKLSESGSYYELIVNI--KKDKVSIFINTSGKGLHKRGYRENALKAPLKET 178 Query: 177 LAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 LA+ I++ SG++ P D MCGSGT++IEAAM A + APGL+RG + F W ++ + Sbjct: 179 LASGIILLSGYRGDRPFSDVMCGSGTIVIEAAMKAKNIAPGLNRG-FAFEKWKEYSSKDF 237 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 + +K EA+ + G+D D R I+ A NAR AG+ + + F+ D+ + + Sbjct: 238 ELLKEEARAEIKPA----EVRLLGNDIDYRAIKLANENARKAGVEDAVAFQKMDMKEFRS 293 Query: 297 PLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQ 356 + G ++ NPPY ER+ +E +I L+ G++ +N W L + A P Sbjct: 294 ---RKKNGLMIVNPPYAERIGNEAEVIQLYKDFGKMYEN-LEDWKLFVLCAHPMFQKYFG 349 Query: 357 LRADKQYKAKNGPLDCVQKNYH 378 +AD+ K NG + C Y+ Sbjct: 350 EKADRNRKLFNGNMLCYLYQYY 371 >UniRef50_B7GKR8 Predicted N6-adenine-specific DNA methylase n=8 Tax=Bacteria RepID=B7GKR8_ANOFW Length = 379 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 121/369 (32%), Positives = 192/369 (52%), Gaps = 10/369 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +L A+ A GLE ++ E+ LG +CQV G V F D R + ++ +W R A R+ + +G Sbjct: 7 TLIATAAMGLESIVADEVRALG-YDCQVDNGKVMFVADERAICRTNLWLRTADRVKVKVG 65 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 E + + +L+ +A+ W + A F V + T+ + VK AIV+ + Sbjct: 66 EFRATTFDELFEQTKALPWAQFLPVDAQFPVVGKSVKSTLFSVSDCQAIVKKAIVEHL-K 124 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 ++ + R+ V LHK+ A++ +D SG GLH RGYR + G AP+KETLAAA+V Sbjct: 125 QHYGVSWFEETGALFRIEVALHKDVATLTIDTSGAGLHKRGYRVKQGEAPLKETLAAALV 184 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 + W P P +DP CGSGT+ IEAA++ + APG +R + W+ +W E + E Sbjct: 185 RLTNWTPDRPFVDPFCGSGTIAIEAALIGQNIAPGFNRD-FVSEQWSWIPSHLWDEAREE 243 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 A+ AR + H G D D R++ A+TNA+ AG+ +LITF+ V K Sbjct: 244 AEDVARY---DQPLHIVGFDIDHRMVDIAKTNAQEAGLADLITFKQMQVKDFRT---KEE 297 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 YG ++ NPPY ERL + + L+ +G W++ + ++ +A K+ Sbjct: 298 YGVIVGNPPYSERLGEKEEVEQLYREMGETFA-ALDTWSIYILTSHRHFEQLYGKQATKR 356 Query: 363 YKAKNGPLD 371 K NG ++ Sbjct: 357 RKLFNGFIE 365 >UniRef50_C8QZA7 Putative RNA methylase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZA7_9DELT Length = 383 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 118/346 (34%), Positives = 180/346 (52%), Gaps = 7/346 (2%) Query: 34 GVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAV 93 GV+F + ++Y+ + +RL SR++ PL +S LY A+ W ++ +F + Sbjct: 44 GVYFTAEPPVLYRIVYQTRLCSRVLAPLLHFNCHSTKYLYKTALALPWEKLLGVAQSFMI 103 Query: 94 HFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALD 153 + + + +S+Y A+ +KDAIVD F ++ RP+VDR PD+ ++ + + A I+LD Sbjct: 104 NARVSDSRVGHSRYAALCLKDAIVDRFQQQFGGRPDVDRQQPDLVFDLHIRRNRAVISLD 163 Query: 154 LSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATD 213 L+G+ LH RGYR +G API+ETLAAA+V SGW PL+DP CGSGT+L EA + Sbjct: 164 LAGESLHRRGYRRESGEAPIQETLAAALVDFSGWDGTRPLVDPFCGSGTILAEALLRRAA 223 Query: 214 RAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRART 273 PG R R+G + A+WQ V+ EA + + A GSD I+ AR Sbjct: 224 IPPGRLRRRFGPANLPDFSPALWQRVQKEADGKMQSLPA---GLLAGSDQSKSAIRMARR 280 Query: 274 NARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIM 333 N L G+ + V LP +++NPPYG RL + AL LG + Sbjct: 281 NLALLPQGDRVELRVSPF----QALPPINNAVIVTNPPYGIRLGDQQEAAALIRELGSFL 336 Query: 334 KNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHV 379 K+ G ++ P LL + L+ ++ K NG L+ V Y + Sbjct: 337 KHHCTGSTACIYFGDPQLLKAIGLKPSRRKKLNNGGLEGVAACYEL 382 >UniRef50_B0TF24 Thump domain protein n=33 Tax=Firmicutes RepID=B0TF24_HELMI Length = 388 Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 121/375 (32%), Positives = 195/375 (52%), Gaps = 12/375 (3%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 L A+ A GLE ++ EL LG + V G V F+GD R + ++ +W R A R+++ +G Sbjct: 6 LIATAAFGLEAVVARELRELGYDDQSVEDGRVIFRGDERAICRANLWLRSAERVLVKVGS 65 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 + +L+ G +A+ W + A F V + + + K AIV+ ++ Sbjct: 66 FPATTFEELFQGTKALPWPDWLPEKAEFPVEGKSVRSKLFSVSDCQAIAKKAIVEKM-KE 124 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 R D P + V L K+ A++ +D SG GLH RGYRD G AP+KETLAAA++ Sbjct: 125 RYRRSWFDEKGPRYTIEVSLLKDVATLTIDTSGAGLHKRGYRDLVGQAPLKETLAAAMIQ 184 Query: 184 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEA 243 S W+ LLDP CG+GT+ IEAAM+ + APG +R + W Q ++WQ+V+ EA Sbjct: 185 LSFWRHDRVLLDPFCGTGTIPIEAAMIGRNLAPGRNRT-FAAEQWGQIPASLWQQVREEA 243 Query: 244 QTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPY 303 + A + G+D D + AR +AR AG+ I + + +++ + + Y Sbjct: 244 HSLA---ALDRELRITGTDIDEAALSLARRHARKAGVDNAIHLQRQPMSESRS---RFKY 297 Query: 304 GTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQY 363 G ++ NPPYGERL + L+ +G++ + W+ + ++ P + +ADK+ Sbjct: 298 GHLICNPPYGERLGERQEVERLYREMGKVF-SALDTWSFYVLTSHPGFEALFGRKADKKR 356 Query: 364 KAKNGPLDCVQKNYH 378 K NG + C NY+ Sbjct: 357 KLYNGRIQC---NYY 368 >UniRef50_A8ZTQ6 Putative RNA methylase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZTQ6_DESOH Length = 395 Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 125/360 (34%), Positives = 184/360 (51%), Gaps = 20/360 (5%) Query: 19 ELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQA 78 EL +L A + + G+ F D +Y+ SRL SR + PL DLY +A Sbjct: 40 ELADLSAADIEPTPRGIRFSADRATLYKINYTSRLLSRCLAPLAVFPCRHTDDLYSAGKA 99 Query: 79 INWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKN-LPRPNVDRDAPDI 137 + W + F G TFA+ +N I +++Y +++KDAI D FT RP+VD PD+ Sbjct: 100 LPWKDFFIKGRTFAITADVVNSDITDARYTTLRLKDAIADYFTENTGRQRPDVDTRNPDV 159 Query: 138 RVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPM 197 RV+V + A I+LD SG+ LH RGYR+ + AP++ET+AAAI+ S W TPL DPM Sbjct: 160 RVDVTILDNRAIISLDTSGEALHKRGYRELSVSAPMQETVAAAILHFSRWDKKTPLYDPM 219 Query: 198 CGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQ---TRARKGLAEY 254 CGSGTLL EA M A + G+ RG +GF D +WQ+V+ EA T +GL Sbjct: 220 CGSGTLLCEALMAACNIPAGILRGAFGFQILPDFDPVLWQQVRKEADAEITEIPEGL--- 276 Query: 255 SSHFYGSDSDARVIQRARTNARLAGIGELITFEVK---DVAQLTNPLPKGPYGTVLSNPP 311 GSD + + A+TN G ++ + D+ +L N L +++NPP Sbjct: 277 ---IAGSDVNPAAVTAAKTNLMGLHYGGRVSITQQAFLDIPELENRL-------IITNPP 326 Query: 312 YGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLD 371 YG R+ + L + LG +K + G ++ D + L L+ + + G LD Sbjct: 327 YGIRMGRDRDLRFFYKCLGDFLKQKCRGSTAWIYFGDRDYIKNLGLKTAWKLPLRAGGLD 386 >UniRef50_P50840 Putative RNA methyltransferase ypsC n=152 Tax=Firmicutes RepID=YPSC_BACSU Length = 385 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 118/367 (32%), Positives = 192/367 (52%), Gaps = 10/367 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +L A+ G+E ++ E+ +LG EC+V G V F+GD + ++ +W R A RI + + Sbjct: 5 TLIATAPMGIEAVVAKEVRDLG-YECKVDNGKVIFEGDALAICRANLWLRTADRIKVQVA 63 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 K + +L+ +AINW F V + T+ + VK AIV+ Sbjct: 64 SFKAKTFDELFEKTKAINWRSFIPENGKFPVIGKSVKSTLASVPDCQRIVKKAIVEKLKL 123 Query: 123 KNLPRPN-VDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 ++ + ++ + +V + L K+ A I LD SG GLH RGYR G APIKETLAAA+ Sbjct: 124 QSGKANDWIEETGAEYKVEISLLKDQALITLDSSGTGLHKRGYRVDQGGAPIKETLAAAL 183 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 V + W P P +DP CGSGT+ IEAA++ + APG +R + W + +W + + Sbjct: 184 VQLTNWTPDRPFVDPFCGSGTIAIEAALIGQNIAPGFNRD-FVSEDWEWIGKDLWNKARL 242 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 E + +A + + SD D R++Q A+ NA AG+G+LI F+ V T L Sbjct: 243 EVEEKAN---YDQPLTIFASDIDHRMVQIAKENAEEAGLGDLIQFKQMQVKDFTTNL--- 296 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 +G ++ NPPYGERL + A+ ++ +G+ + W++ + +++ + +A K Sbjct: 297 EFGVIVGNPPYGERLGEKKAVEQMYKEMGQAFE-PLDTWSVYMLTSNENFEEAYGRKATK 355 Query: 362 QYKAKNG 368 + K NG Sbjct: 356 KRKLFNG 362 >UniRef50_Q1NS64 Putative RNA methylase:THUMP n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NS64_9DELT Length = 382 Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 120/347 (34%), Positives = 181/347 (52%), Gaps = 8/347 (2%) Query: 34 GVHFKG-DTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFA 92 GV+F + + +Y+ + +RL SRI+ PL +S LY I W + NP +F Sbjct: 42 GVYFSAAEHQTLYRIVYQTRLCSRILAPLLHFDCHSSKYLYRTAGTIPWERLLNPEQSFM 101 Query: 93 VHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIAL 152 ++ I +SQY A+++KDAIVD F +++ RP +D+ PD+ +++ + + A I+L Sbjct: 102 INARVSGSRISHSQYAALRLKDAIVDYFQQRSGRRPGIDKHQPDLVIDLHIRRNRAVISL 161 Query: 153 DLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLAT 212 DL+G LH RGYR + API+ETLAAA++ +GW L+DP CGSGTLL EA M + Sbjct: 162 DLAGGSLHRRGYRQESVEAPIQETLAAAMIDFAGWDGAKKLVDPCCGSGTLLAEALMRQS 221 Query: 213 DRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRAR 272 G R +G + WQ+ K EA+ R +A GSD + I+ AR Sbjct: 222 MIPAGYLRNHFGLQQLPDFEPESWQQSKEEAK---RGIIAPPPGLLAGSDLSKKAIRAAR 278 Query: 273 TNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRI 332 N L G+ +T +V + +L PL K +++NPPYG RL + A AL LG Sbjct: 279 RNLALLPHGDRVTLKVCPLQELA-PLNK---AVIVANPPYGVRLGDKAAAAALIGELGSF 334 Query: 333 MKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHV 379 +K+ G L+ LL + L+ + NG L+ V Y + Sbjct: 335 LKHHCTGSTACLYFGDRQLLKAIGLKPSAKKNLNNGGLEGVLARYEL 381 >UniRef50_A1V086 THUMP domain protein n=52 Tax=Burkholderia RepID=A1V086_BURMS Length = 430 Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 122/387 (31%), Positives = 187/387 (48%), Gaps = 32/387 (8%) Query: 31 VQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGAT 90 V GGVHF+G + + SR+ASR++L + ++ D+Y W F T Sbjct: 43 VPGGVHFRGAWAAGMAANLHSRIASRVLLKIAHRPYRNEQDVYALALEQPWERWFASTQT 102 Query: 91 FAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASI 150 V + + +++ ++ ++VKDAI D K RP++D PD+RV +L ++ Sbjct: 103 LRVDITAIKSPLKSLEFATLRVKDAICDRLREKTGARPSIDTAQPDVRVFAFLTAGDCTL 162 Query: 151 ALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAML 210 LD SG+ L RG+R G AP++E LAA I+ +GW PGTPL DPMCGSGT + EAA + Sbjct: 163 YLDTSGEPLFKRGWRLDKGAAPLRENLAAGILRLAGWTPGTPLYDPMCGSGTFVAEAAQI 222 Query: 211 ATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHF-YGSDSDARVIQ 269 A APG+ R R+GF Q+D WQ +K A R + +GSD +++ Sbjct: 223 ALGVAPGVER-RFGFEKLKQYDITAWQTLKVAAMDAKRAARGKRDDLLIFGSDISGDMLE 281 Query: 270 RARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLD------------ 317 +AR N AG+ L ++ D +T P G +++NPPYGER++ Sbjct: 282 KARANLERAGVPSLWLKQI-DARNMTPP--AAAPGVIVTNPPYGERIEVRGRGPRGDVRE 338 Query: 318 ------SEPALIALHS---------LLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 + A H+ LG +K +F GW + S+ L L+LR + Sbjct: 339 TGKNRGGDEAFRRTHADSPDSEFFRALGDALKQRFAGWQAFMLSSDRTLPGQLRLRESAK 398 Query: 363 YKAKNGPLDCVQKNYHVAESTPDSKPA 389 NG L+C + + + +PA Sbjct: 399 TPLFNGALECRLFRFDLIAGSIRQRPA 425 >UniRef50_B2V4U2 Methyltransferase n=7 Tax=Clostridium RepID=B2V4U2_CLOBA Length = 386 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 113/377 (29%), Positives = 195/377 (51%), Gaps = 10/377 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M +L A++ G+E + EL LG + ++ G V F+GD + + + R A R+++ Sbjct: 1 MYNLIATSTFGIESITAKELRALGYEDLEIENGKVTFEGDEMDIAIANVHLRTADRVLIK 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + E + S +L+ G +++ W E+ V + T+ + VK A++D+ Sbjct: 61 MAEFEATSFEELFQGTKSVKWHEIIPKDGIMHVVGKSVKSTLHSVPDCQSIVKKAVIDSM 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + ++ ++ V + K+ ++ +D +G GLH RGYR+ AGIAP+KETLAA+ Sbjct: 121 S-EHYGINQFSESGSTYKIEVAILKDKVTLTIDTTGPGLHKRGYRELAGIAPLKETLAAS 179 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +++ S W L+DP CGSGT+LIEAAM+A + APG +R F DE + Sbjct: 180 MLLLSRWNDNFELVDPFCGSGTILIEAAMIALNIAPGCNR---NFVAEEWSDEI--RNTF 234 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 A + A+K + + + G D D RV++ A NA AG+ + I F+ +D ++ Sbjct: 235 AMVKDGAKKAVKDKEINLIGYDIDYRVLKVAMDNAEKAGVSKYIKFQKRDFMDFSSS--- 291 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 +G ++SNPPYGER+ L L+ +G+ MK + W+ ++ ++ L +++ Sbjct: 292 KKHGFMISNPPYGERIGERETLEPLYKYMGQ-MKKKLSEWDFNILTSIEGFEKLLGVKST 350 Query: 361 KQYKAKNGPLDCVQKNY 377 K K NG + C Y Sbjct: 351 KNRKLYNGTIRCYYYQY 367 >UniRef50_C5WIH5 Methyltransferase n=45 Tax=Firmicutes RepID=C5WIH5_STRDG Length = 384 Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 122/371 (32%), Positives = 196/371 (52%), Gaps = 14/371 (3%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 L A+ A GLE ++ E+ LG +CQV G V+F+GD + ++ +W R A R+ + +G+ Sbjct: 7 LVATAAAGLEAVVGKEVRALG-FDCQVENGKVYFEGDLEAIAKTNLWLRAADRVKIIVGQ 65 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSG-LNDTIRNSQYGAMKVKDAIVDAFTR 122 + +L+ GV A++W GA F + + + + N K A+V + Sbjct: 66 FPARTFEELFQGVFALDWENYIPLGAKFPISKAKCVKSKLHNEPSVQAITKKAVVKKL-Q 124 Query: 123 KNLPRPN---VDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAA 179 K RP + + + V + K+ A++ +D +G L RGYR + G APIKE +AA Sbjct: 125 KYFHRPEGVPLQEVGSTVNIEVSILKDQATVMIDTTGSSLFKRGYRVQKGGAPIKENMAA 184 Query: 180 AIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 AI+ S W P PL+DP CGSGT IEAA++ + APG +R + F W+ D+ I Q+V Sbjct: 185 AILALSNWFPDKPLVDPTCGSGTFCIEAALIGMNIAPGFNRS-FAFEEWSWVDKEIIQKV 243 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 + EA+ AR + G D D+R+I+ A++NA AG+ ++ITF+ +L + Sbjct: 244 RDEAEQEAR---YDAELDISGFDIDSRMIEIAKSNAEEAGLSDVITFK---QMRLQDFRT 297 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 G ++SNPPYGERL + A+ L++ +G+ W+ + ++ A Sbjct: 298 DKVNGVIISNPPYGERLLDDKAVDILYNEMGQTFA-PLKTWSKFILTSDEQFEKKYGQTA 356 Query: 360 DKQYKAKNGPL 370 DK+ K NG L Sbjct: 357 DKKRKLYNGTL 367 >UniRef50_A6NQS7 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NQS7_9BACE Length = 399 Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 130/385 (33%), Positives = 190/385 (49%), Gaps = 21/385 (5%) Query: 1 MNSL--FASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIM 58 MN L F T GLE L EL L + + G V G + + + R R++ Sbjct: 27 MNQLQFFVPTLFGLEGLAADELRRLNLADVRAENGHVLCTGRPGDIPRLNLNLRTGERVL 86 Query: 59 LPLGECKVYSDLD-LYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIV 117 L LG D D L+ GV+AI W E A F V LN + + VK A+ Sbjct: 87 LVLGSFHT-PDFDALFEGVKAIPWEEYLPRTAAFPVKGHSLNSALHSVPACQSIVKKAVA 145 Query: 118 D----AFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPI 173 A+ + LP + P ++ + ++TA I LD SG GLH RGYR +AP+ Sbjct: 146 ARLGRAYGLETLPE-----NGPLFQIQFSIMRDTAMIMLDTSGAGLHKRGYRAVGVVAPL 200 Query: 174 KETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDE 233 +ETLAAA+VM S ++ P DP CGSGT+ IEAA++A +RAPGL R + W Sbjct: 201 RETLAAAMVMLSQYRGKDPFCDPFCGSGTIAIEAALIARNRAPGLDRS-FSAQKWPWLSS 259 Query: 234 AIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQ 293 W + +EA + G +Y +G D D + ++ AR+NA AG+ +++ FEV D + Sbjct: 260 QAWMDAASEAMDKEFDG--QYD--IWGGDIDPKAVEIARSNAEKAGVDDVVRFEVADATR 315 Query: 294 LTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLS 353 PYG V++NPPYGER+ + L++ G+ ++ GW +S+ S+ + Sbjct: 316 FHR---SEPYGRVVTNPPYGERIMEKKEAEGLYASFGQAVRGLPAGWRVSVLSSHTEFER 372 Query: 354 CLQLRADKQYKAKNGPLDCVQKNYH 378 ADK+ K NG + C YH Sbjct: 373 TFGRTADKKRKLYNGMIKCDLFQYH 397 >UniRef50_Q0K713 Predicted N6-adenine-specific DNA methylase n=11 Tax=Burkholderiaceae RepID=Q0K713_RALEH Length = 417 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 129/402 (32%), Positives = 191/402 (47%), Gaps = 36/402 (8%) Query: 2 NSLFASTARGLEELLKTELENLGAVEC----------QVVQGGVHFKGDTRLVYQSLMWS 51 + FA RGLE L EL + A+ Q V GGV+F G+ Y + S Sbjct: 3 QAFFAPCPRGLESALAEELREIAAMPGMAALAPFTVHQEVPGGVNFSGEMAAAYAVNLHS 62 Query: 52 RLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMK 111 R+ASR+++ + + D+Y + + W + F+P + V + +R+ + A++ Sbjct: 63 RIASRVLMRVAARGYRHEDDIYTLARGVRWEQWFSPDESLRVDITSHKSPLRSLNFTALR 122 Query: 112 VKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIA 171 VKD + DA + RP+VD +PD+R+ L + ++ LD +G+ L RG+R G A Sbjct: 123 VKDGVCDALRERVGVRPSVDTASPDVRIYAHLTERDCTLYLDTTGEPLFKRGWRTEKGEA 182 Query: 172 PIKETLAAAIVMRSGWQPGT---PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGW 228 P+KE LAA I+ +GW PG P DPMCGSGT LIEAA +A APG R + F Sbjct: 183 PLKENLAAGILRLAGWVPGQTFRPFYDPMCGSGTFLIEAAQVALGIAPGGSRS-FAFEWL 241 Query: 229 AQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGI-GELITFE 287 D WQ++K++AQ RAR + GSD ++ R N AG+ GE T + Sbjct: 242 KGMDTKAWQKLKSDAQ-RARMLASADELQVVGSDISTDMLAITRANWERAGLPGEARTKQ 300 Query: 288 VKDVAQLTNPLPKGPYGTVLSNPPYGERLD-----------------SEPALIALHSLLG 330 V A+ P P G +L NPPYGER+ E A S Sbjct: 301 VD--ARFVQP-PFDEPGLLLMNPPYGERIAVRGQRRLPEEAMPRDEVEEAAANQFASAFA 357 Query: 331 RIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDC 372 +K F GW +F+ L+L+ ++ NG ++C Sbjct: 358 TTLKQHFAGWQAWVFTGDMGFPRRLRLKESRRTPLYNGNIEC 399 >UniRef50_C4ZFU5 Nucleic acid methylase n=25 Tax=Firmicutes RepID=C4ZFU5_EUBR3 Length = 423 Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 120/361 (33%), Positives = 187/361 (51%), Gaps = 13/361 (3%) Query: 11 GLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDL 70 GLE ++K E+ +LG +V G V F+GD + ++ ++ R A R++L +G K + Sbjct: 53 GLEAVVKREIYDLGYEITRVEDGRVSFEGDAEAICRANIFLRGAERVLLQVGRFKAATFD 112 Query: 71 DLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNV 130 +L+ V+A+ W F V + +I++ + ++ + A + ++ Sbjct: 113 ELFENVKALPWENYIPKDGRFWVKKAS---SIKSKLFSPSDIQSIVKKAMVERMKRSYHI 169 Query: 131 D---RDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGW 187 D D V V+L+K+ + LD SGD LH RGYR AP+ ETLAA+++M + W Sbjct: 170 DWFPEDGAQYPVRVFLYKDEVMVTLDTSGDSLHKRGYRLATSKAPLTETLAASLIMLTPW 229 Query: 188 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRA 247 L+DP CGSGT IEAAM+A + APG++R S +W E EA+ Sbjct: 230 HADRILVDPFCGSGTFPIEAAMMAANIAPGMNREFTAESWTNIIPRKLWYEAVQEAEDMI 289 Query: 248 RKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVL 307 K + G D D V+ AR NA+ AG+ +I F+ + VA L +P YG ++ Sbjct: 290 DKDV---QVDIQGYDIDPDVVAAARENAKRAGVEHMIHFQQRAVADLHHP---KKYGFII 343 Query: 308 SNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKN 367 SNPPYGERL+ + AL AL+S +G K + W++ L ++ D + +ADK K N Sbjct: 344 SNPPYGERLEEKSALPALYSQIGEAYK-RLDAWSMYLITSYEDTERYIGRKADKNRKIYN 402 Query: 368 G 368 G Sbjct: 403 G 403 >UniRef50_A8G252 Putative RNA methylase family UPF0020 n=7 Tax=Prochlorococcus marinus RepID=A8G252_PROM2 Length = 374 Score = 187 bits (476), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 113/371 (30%), Positives = 182/371 (49%), Gaps = 7/371 (1%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 ++ AS GLE+ L E+ NLG + ++F+ D Y+ +SRLA R + Sbjct: 2 NVVASAPEGLEKSLAEEISNLGGFNINTYKRFINFECDIETFYRVHFYSRLAFRFYREIA 61 Query: 63 ECKVYSDLDLYLGVQ-AINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 Y LY GV+ + +W + TF V +G ++ ++ + A++VK++I D Sbjct: 62 TFSCYDKQSLYEGVRDSFDWLNWLHFEKTFNVKVTGRTSSLSHTHFTALEVKNSITDLQQ 121 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 R N+ D PD +++ L+ A I+L S + LH RGYR G AP+KE LA+ + Sbjct: 122 AVWNKRSNISLDNPDFIIHLHLNNNKAIISLQSSLESLHKRGYRPAVGNAPLKENLASGL 181 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + + W PL+D MCGSGT LIEA + + + + F W + I+ K Sbjct: 182 INMTKWNGKVPLIDFMCGSGTFLIEAVNQILEVPINIDQ-VYLFENWLDFRKDIYLSEKN 240 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 +A+ + E G + + +V ++A N LAG+ I D +L L Sbjct: 241 KAKYKIIN--YEKLPTIIGCEINKKVFEQANINISLAGLESYIEIINNDFLELQ--LSCK 296 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 P G ++ NPPYG++L + LI L+ +G +KN F GW L S +P L L++++ Sbjct: 297 P-GIIICNPPYGKKLGDQNELICLYEQMGIFLKNNFSGWEFWLLSGNPKLTKYLKMKSSV 355 Query: 362 QYKAKNGPLDC 372 + NG +DC Sbjct: 356 KIPVSNGGIDC 366 >UniRef50_C3WCN4 Methyltransferase n=6 Tax=Fusobacterium RepID=C3WCN4_FUSMR Length = 384 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 121/378 (32%), Positives = 190/378 (50%), Gaps = 10/378 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +L AST G+E +++ E LG + G V F+G R + ++ + R A R+ + +G Sbjct: 6 TLIASTTMGVESVVRDECVALGFENVKAFNGRVEFEGTLRDIAKANIHLRCADRVFIKMG 65 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKV-KDAIVDAFT 121 E K + +L+ V+ + W ++ F V + + S+ K+ K AIV+ Sbjct: 66 EFKALTFDELFNNVKRLPWGDIIEENGEFPVSWVSSVKSKLFSKSDIQKITKKAIVEKMK 125 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 K + D + + H + + +D SG+ LH RGYR APIKET+AAA+ Sbjct: 126 EK-YGKSYFYEDGAKFAIKIQAHNDVFLVMIDTSGEPLHKRGYRAIKNEAPIKETMAAAL 184 Query: 182 VMRSGWQPGT-PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 V+ S W+ G PL+DPMCG+GTLLIEAAM+A + APG +R + W E W +V+ Sbjct: 185 VLLSRWKGGDLPLVDPMCGTGTLLIEAAMIARNIAPGANRN-FVSEDWKLIPENDWIDVR 243 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 EA + E YGSD DA ++ AR N AG+ + I E ++ + Sbjct: 244 DEAFSMED---YEKEVKIYGSDIDADTVEIARKNIAKAGVEDDIHLECQNFLDMER---D 297 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 YG +++NPPYG+RL E A+ L+ LLG I + + W+ + ++ +A Sbjct: 298 EKYGALITNPPYGDRLLDEEAVERLYGLLGDICRMRIPKWSYYIITSHKGFEKAFGKKAT 357 Query: 361 KQYKAKNGPLDCVQKNYH 378 K K NG ++C Y+ Sbjct: 358 KNRKLYNGGIECHYYQYY 375 >UniRef50_Q6MD72 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MD72_PARUW Length = 380 Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 111/332 (33%), Positives = 173/332 (52%), Gaps = 13/332 (3%) Query: 44 VYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIR 103 +Y+ SRLA+R++LPL + + LY + I+W+ G TFA+ + + +R Sbjct: 49 IYKINYASRLATRVLLPLSRFRCFDRKSLYRHIYDIDWSLYLKEGNTFAIDANVHHRELR 108 Query: 104 NSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRG 163 NS + A VKDAI D K RP+VD P +++N+++ A I+ D SG LH RG Sbjct: 109 NSLFAAQVVKDAICDQLRHKVGRRPSVDVQQPHVQLNLYIQHSLAIISFDTSGTPLHKRG 168 Query: 164 YRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRW 223 YR AP++ETLAAAI+ + + LDP CGSGTLLIEAA++A+ PG R +W Sbjct: 169 YRQETVEAPLQETLAAAILRLAKYSADKVFLDPCCGSGTLLIEAALMASQTPPGYLRQKW 228 Query: 224 GFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGEL 283 GF + W +V+ RK + H +G D + + +TN + AG G+ Sbjct: 229 GFMNHPDYQANEWLKVRNRLDEH-RKTIQ--PGHLFGIDINKSAVWATKTNLKAAGFGQA 285 Query: 284 ITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFG----G 339 + D + + P P +++NPP+G+RL+ E L + LG MK + G Sbjct: 286 VEVLQADFREFS---PTVPPDLIVTNPPHGKRLEEEDQLRPFYRSLGDFMKKKTARPAQG 342 Query: 340 WNLSLFSASPDLLSCLQLRADKQYKAKNGPLD 371 + +F+ + +L + L A K++ NG +D Sbjct: 343 F---VFTGNLELAKEVGLAASKRHVLNNGGID 371 >UniRef50_B0S9B9 N6-adenine-specific DNA methylase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0S9B9_LEPBA Length = 358 Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 115/350 (32%), Positives = 181/350 (51%), Gaps = 14/350 (4%) Query: 32 QGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATF 91 +GGV F G V Q + ++ ASR+ L L + + Y + W + PG +F Sbjct: 17 RGGVFFSGKKEDVIQFAIHTKFASRVNLQLLHENAQNYDEFYSKAIELPWEKYIGPGVSF 76 Query: 92 AVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIA 151 ++ + D ++NS++ ++KDAI+D + + P + + D+ + V H + SI Sbjct: 77 SID-AETKDKLKNSEFSMHRMKDAILDRLRSQKVALPEIQKRMADVTIVVRSHTDRFSIE 135 Query: 152 LDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLA 211 L LSGD + RGYR AG AP++E +A A++ S W+ G LLDPMCGSGT+LIEAA+ Sbjct: 136 LSLSGDPVGRRGYRLHAGNAPVREPIAQAMLELSEWKEGDTLLDPMCGSGTILIEAAL-- 193 Query: 212 TDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRA 271 +R G R+ F+ + I+Q + RK + H +G D D I+ A Sbjct: 194 RERLYG-EINRFLFA-----ESPIFQILFPTYVFSERKKENPTTPHLFGFDIDPEAIRIA 247 Query: 272 RTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPA--LIALHSLL 329 + NA AG+ + I FEV D L N G G +++NPPYG+R+ +P L ++ Sbjct: 248 KENAYEAGVEDFIKFEVGDCLALKNAF--GSKGHLVTNPPYGDRI-GKPMEDLREMYFQF 304 Query: 330 GRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHV 379 GR++KN+FGGW ++ A L L+ +K K+ L +Y + Sbjct: 305 GRVLKNEFGGWKFTVLCADFSLFGKFGLKENKHISLKHANLKAKIVDYEL 354 >UniRef50_A5GQS8 Predicted N6-adenine-specific DNA methylase n=21 Tax=cellular organisms RepID=A5GQS8_SYNR3 Length = 398 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 122/374 (32%), Positives = 184/374 (49%), Gaps = 20/374 (5%) Query: 23 LGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQ-AINW 81 GA Q ++ V + D Y++ + +RL +++ L S LY GVQ A +W Sbjct: 27 FGAQSLQTLRRAVRCRLDRAGFYRAHLQARLPFQLLRLLASFPCSSRAQLYGGVQQAADW 86 Query: 82 TEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNV 141 P +F V SG + +S + A++VK+A+VD + + R +VD + PD ++ Sbjct: 87 QGWLPPQLSFRVEASGRAGELNHSHFTALEVKNALVDWQRQHSGQRSDVDLEDPDRVFHL 146 Query: 142 WLHK----ETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPM 197 L + AS+ + S LH RGYR G+AP+KE LAA ++ +GW PL+DP Sbjct: 147 HLGQGRQGPMASLYVAGSSSSLHRRGYRAAMGLAPLKENLAAGLMAITGWDGSVPLVDPF 206 Query: 198 CGSGTLLIEAAMLATDRAPGLHRG------------RWGFSGWAQHDEAIWQEVKAEAQT 245 CGS TLLIEA R PGL G R+ W D +W+ + Sbjct: 207 CGSATLLIEAVSRVLQRPPGLLPGAALEPAHHAQARRFSCLQWPDADLGLWRSEVVASAE 266 Query: 246 RARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGT 305 +A G + + G + D V+++AR+N AG+ I D +L P GP G Sbjct: 267 QALAGSQQPLAPVIGLEKDPEVLEQARSNVAAAGLEAWIDLRPGDGCELMP--PPGP-GV 323 Query: 306 VLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKA 365 ++ NPPYGERL E AL AL+ GR +K+ GW+L L S + L L ++A ++ Sbjct: 324 LVCNPPYGERLGDEQALDALYHRFGRQLKDHCSGWSLWLLSGNAKLTRALGMKASRRVPV 383 Query: 366 KNGPLDCVQKNYHV 379 NG +DC +Y + Sbjct: 384 SNGGIDCRWLHYEI 397 >UniRef50_B8JAH2 Putative RNA methylase n=5 Tax=Myxococcales RepID=B8JAH2_ANAD2 Length = 387 Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 129/391 (32%), Positives = 189/391 (48%), Gaps = 22/391 (5%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 FA+ A+G E L+ EL L + +GGV F+G ++ + +R A R++L L Sbjct: 3 FFATCAKGTEGALRRELSGLRLPAVRGDRGGVSFEGALEAGMRACLHARTAMRVLLELAR 62 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 LY G +A+ W + + T AV + + TI +S + A+KVKDA VD + Sbjct: 63 FPAPDAAALYEGARAVAWQDWLDVRTTLAVEATVSSTTITHSGFAALKVKDAAVDVLRER 122 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 RP+VD PD+R+ + L ++ A+++LDL+G LH RGYR AP+KETLAAA+++ Sbjct: 123 LGARPDVDPKDPDVRIVLHLARDEATLSLDLAGAPLHRRGYRAVTTEAPLKETLAAAVLL 182 Query: 184 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQH---DEAIWQEVK 240 G P P DPM GSGTL IE A+ A APGL R +GF W + ++ W +K Sbjct: 183 LGGVDPALPFADPMAGSGTLAIEHALRARRIAPGLDRA-FGFQRWPSYRGGPQSAWDRMK 241 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 A A+ L + D + IQ R NA AG+ + D L P Sbjct: 242 AAARAEI---LPRAPAPIVARDGHPKAIQALRLNAAAAGVEADLEISQADARDLQ---PS 295 Query: 301 GPYGTVLSNPPYGERLDSEPAL-------IALHSLLGRI-----MKNQFGGWNLSLFSAS 348 G +++NPPYGERL +A L G M + GW + S + Sbjct: 296 ADAGAIVTNPPYGERLGGGGEGASAAEARVAGKKLQGFYRGLAEMLVRHHGWTAVVLSGN 355 Query: 349 PDLLSCLQLRADKQYKAKNGPLDCVQKNYHV 379 P L + +R ++ NGPL+ Y + Sbjct: 356 PLLERAIPIRPAVDHRLWNGPLEAHLLKYEL 386 >UniRef50_C7PKB2 Putative RNA methylase n=2 Tax=Sphingobacteriales RepID=C7PKB2_CHIPD Length = 398 Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 114/370 (30%), Positives = 183/370 (49%), Gaps = 9/370 (2%) Query: 16 LKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLG 75 L+ E++ LG + + GV K + + R AS+++ L + + D+Y Sbjct: 22 LEQEIKELGFEQTETFVTGVRLKATVNECIRLNLNLRCASQVLYSLQSFEAGNADDVYNN 81 Query: 76 VQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAP 135 + W ++ G F++ + N++I NS Y ++VKDAI+D K RP+ Sbjct: 82 IHQYPWEDILPDGGYFSITSNVSNESINNSMYANLRVKDAIIDRIREKTGKRPSTGAALT 141 Query: 136 DIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLD 195 ++++ E A I +D SGD L GYR +G A + E+LAAA + S W +P ++ Sbjct: 142 GAVIHLFWKDEHAEIFVDTSGDSLARHGYRAISGPAQMLESLAAATIYASRWDRVSPFVN 201 Query: 196 PMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA--EAQTRARKGLAE 253 MCGSGT+ IEAAM+AT+R PGL + F +D ++Q+ A E Q + GL Sbjct: 202 VMCGSGTVAIEAAMIATNRRPGLFITNYAFMHLKGYDIQVYQQEDARLEEQIKEIPGL-- 259 Query: 254 YSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYG 313 +D A+ I+ AR NA AG+G+LI F V D +P G G NP Y Sbjct: 260 ---RIIATDHSAKAIESARKNAIAAGVGKLIEFAVCDFT--ATKVPPGVPGVFYVNPEYD 314 Query: 314 ERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCV 373 ER + L +S +G MK + GG+ +F+ + +L + L+A ++ + + +DC Sbjct: 315 ERANEIMVLEETYSRIGDFMKQKCGGYFGYVFTGNLELAKKIGLKAKRRIEFYSSTIDCR 374 Query: 374 QKNYHVAEST 383 Y + T Sbjct: 375 LLEYELYSGT 384 >UniRef50_C9YEX1 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YEX1_9BURK Length = 448 Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 121/399 (30%), Positives = 187/399 (46%), Gaps = 30/399 (7%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVV---QGGVHFKGDTRLVYQSLMWSRLASRIML 59 +LF A G+EE L E+ + + + +GGV + ++SRLA R+++ Sbjct: 29 TLFLPCAAGVEEYLAPEILQITGLPPGCITKQRGGVAVRTGFEHAMLLNLYSRLAQRVLV 88 Query: 60 PLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDA 119 + + S+ DLY + W F P + V + + + + + A+KVKDA+ D Sbjct: 89 LVSYTEYRSEQDLYRAAMQVAWERWFTPRESIKVEVTAQHSPLTSLNFAALKVKDAVCDR 148 Query: 120 FTR-KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLA 178 F RP+V+ PD+R+ L + S+ +D SG+ L RG+R+ G AP+KETLA Sbjct: 149 FREVAGGVRPDVNTQWPDVRIYAHLTTDACSLYIDTSGEPLFKRGWREDKGDAPLKETLA 208 Query: 179 AAIVMRSGWQPGT----PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEA 234 AA++ SGW G PL DP CGSGT++IEAA +A + A G R R+ F + Sbjct: 209 AAMIAASGWASGDDDLLPLYDPCCGSGTVVIEAAQIACNIAAGSLR-RFAFEKYKPFRSE 267 Query: 235 IWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQL 294 W +K EA K + YGSD R++ A NA+ AG+ ++I F D Q Sbjct: 268 EWAAMKKEAADAVVKPEPGQKALIYGSDVSFRMVDFAERNAQRAGVADVIEFRGGDALQR 327 Query: 295 TNPLPKGPY--GTVLSNPPYGER-------------------LDSEPALIALHSLLGRIM 333 P+ G ++ NPPYGER L + + L Sbjct: 328 MPPIDVSETGGGVMVINPPYGERIGIGGVAGEGEGARFGARELAEADDGVDFFNQLASHW 387 Query: 334 KNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDC 372 K + GW + + L S ++L+ ++ NGPL+C Sbjct: 388 KKNYSGWTAWMLTPDLKLPSKMRLKESRRVPMWNGPLEC 426 >UniRef50_B9P9P2 Predicted protein n=14 Tax=cellular organisms RepID=B9P9P2_POPTR Length = 433 Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 111/320 (34%), Positives = 168/320 (52%), Gaps = 13/320 (4%) Query: 4 LFASTARGLEELLKTELE---NLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 LF A G+E L E+ L + V +GGV +G R + SRLA R+++ Sbjct: 82 LFLPCAAGVEGFLADEVHAITGLSGHDLMVGRGGVMVRGLWRDALLLNLHSRLAQRVLVQ 141 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L + ++ DLY + W F+P +F + + + + + + A++VKDAI D F Sbjct: 142 LSQTLYRNENDLYRAASEVAWEIWFSPRESFKIEVTAQHSPLTSLNFAALRVKDAIADRF 201 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + RP+V+ PD+RV++ L + A+I +D SG+ L RG+R+ G AP+KETLAAA Sbjct: 202 RDRKGVRPDVETRHPDVRVHLHLTTDEATIYIDTSGEALFKRGWREDKGDAPLKETLAAA 261 Query: 181 IVMRSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 ++ +GW P PL DP CGSGT+LIEAA +A G+ R R+ F +W Sbjct: 262 MIAATGWDPHGDDPQPLYDPCCGSGTVLIEAAQIARRIPAGILR-RFAFEKLVPFQRHVW 320 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 + + EA+ L + YGSD R++ A+ NA AG+G+ + D Q Sbjct: 321 EAMLDEAEAAI---LPDSPVAIYGSDVSHRMVDFAQRNAERAGVGQTVQLRGGDALQRMP 377 Query: 297 PLPKGPYGTVLSNPPYGERL 316 P + G +L NPPYGER+ Sbjct: 378 PCEQ--PGLMLLNPPYGERI 395 >UniRef50_C2KWZ1 Site-specific DNA-methyltransferase (Adenine-specific) n=6 Tax=Firmicutes RepID=C2KWZ1_9FIRM Length = 387 Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 124/367 (33%), Positives = 184/367 (50%), Gaps = 16/367 (4%) Query: 11 GLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDL 70 GLE + K E+++LG V G VHF GD + ++ ++ R R++L LG S Sbjct: 13 GLEAVCKKEIQDLGYDVHTVSDGKVHFIGDAEAIVRANIFLRTGERVLLKLGSFHAESYE 72 Query: 71 DLYLGVQAINWTEMFNPGATFAV-HFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPN 129 DL+ G +A+ E A+F V S + + + + +K A+VD + Sbjct: 73 DLFQGTKALPLEEYLPKDASFWVTKASSVKSKLFSPRDIQSVMKKAMVDRMA-SYYHQSF 131 Query: 130 VDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQP 189 + V L+K+ + LD SGD LH RGYR + G APIKETLAA++++ S W+ Sbjct: 132 FEEHGAKYPFRVSLYKDEVLLCLDTSGDSLHKRGYRLKMGKAPIKETLAASLILLSKWRE 191 Query: 190 GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQH-DEAIWQEVKAEAQTRAR 248 P +DPMCG+GT IEAAM+A APG+HR + W + W EA Sbjct: 192 DAPFVDPMCGAGTFPIEAAMIAAKIAPGMHR-HFTAEAWENLIPKKEWDYALEEAGDEID 250 Query: 249 KGLAEYSSHFYGS-------DSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 + L E + YG D D +I R NA AG+G+LI F+ ++V ++++ +G Sbjct: 251 RSLLETKKNSYGKMVDIQGYDIDPAMIPVCRENAERAGVGKLIHFQEREVGKMSHS-KRG 309 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 G +L+NPPYGER++ + L L++ L R W L L +A L +ADK Sbjct: 310 --GLILTNPPYGERIEDKRNLPLLYTEL-REAYEDLDDWRLCLITAYEQAEKYLG-KADK 365 Query: 362 QYKAKNG 368 K NG Sbjct: 366 NRKLYNG 372 >UniRef50_D2BKU1 RNA methyltransferase n=24 Tax=Lactobacillales RepID=D2BKU1_LACLK Length = 384 Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 118/375 (31%), Positives = 191/375 (50%), Gaps = 18/375 (4%) Query: 4 LFASTARGLEELLKTELENLGAVECQVV-QGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 L A+++ GLE L+ EL NL + + V F+G+ + ++ +W R A R+ + +G Sbjct: 7 LLATSSSGLESLVARELRNLEIENVSIDDRSRVFFEGNLATIAKANLWLRTADRVKIVVG 66 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFS-GLNDTIRNSQYGAMKVKDAIVDAFT 121 E K + +L+ V A+ W E+ G+ F V + + T+ N K AIV Sbjct: 67 EFKARTFDELFENVYALPWAELIPFGSQFPVSKAKAVKSTLHNEPSIQSITKKAIVKKL- 125 Query: 122 RKNLPRPN---VDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLA 178 + RP + + + + LHK+ A++ +D +GD L RGYR G AP+KE +A Sbjct: 126 QTTYHRPEGVPIPENGAKFSIEIALHKDMATVLIDTTGDSLFKRGYRSEKGEAPLKENMA 185 Query: 179 AAIVMRSGW--QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 A+I++ + W P +DP CGSGT IEAAMLA + APG++R + F+ W DE I Sbjct: 186 ASIILLTNWLANPRRAFVDPTCGSGTFTIEAAMLALNMAPGMNRP-FAFTAWPWFDEEIL 244 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQL-T 295 ++ KA A+ + R L G D D ++I A+ NA AG+ ++I ++ + T Sbjct: 245 KQEKALAKKQIRTDL---ELDIQGFDIDGKMIDIAKHNALAAGLSDVIKYKQMRLQDFRT 301 Query: 296 NPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCL 355 + G ++SNPPYG RL+ E A+ AL+ +G+ W+ + ++ Sbjct: 302 DKFD----GVLVSNPPYGVRLEDEEAVAALYGEMGKTFA-PLETWSKYILTSDVAFEKHY 356 Query: 356 QLRADKQYKAKNGPL 370 +A K+ K NG L Sbjct: 357 GAKATKKRKLYNGTL 371 >UniRef50_Q2LXZ8 Predicted N6-adenine-specific DNA methylase n=3 Tax=Bacteria RepID=Q2LXZ8_SYNAS Length = 406 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 114/383 (29%), Positives = 189/383 (49%), Gaps = 6/383 (1%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + + + +G+ LK E+E+L + + +G + + R R++ Sbjct: 12 FSRILVTCPKGIAPYLKNEIESLDFPVDYEREAAILTEGTLEDSLRLNLHLRTGHRVLYL 71 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L E V +LY + ++W + + V + + +IR++++ K KDAIVD Sbjct: 72 LAEGAVNDPNELYRWIAGLSWESILHEDGYLCVTSTVDHPSIRDTRFANQKCKDAIVDRL 131 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 R RP+ V+++ A + LD SG+ L RGYR AP++ETLAAA Sbjct: 132 QRICGRRPDSGPARDRAVVHLFWKGTRAQLYLDTSGEPLSRRGYRKIPVQAPMQETLAAA 191 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 IV+ +GW P ++PMCGSGT+ IEAA++A +RAPGL R +GF A+W+E++ Sbjct: 192 IVLATGWNGKGPFVNPMCGSGTIAIEAALIALNRAPGLLRSNFGFRHIKGFPAALWKELR 251 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 +AQ +A + + +D D R I A NA AG+ I V D + P P+ Sbjct: 252 RKAQEKAAR---RFPGQIIATDMDRRAIAAAEQNAVNAGVQNWIRLAVCDYTETDIP-PE 307 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G V+ NPPYGERL + L ++ +G +KN G+ +F+ + +L + L+ Sbjct: 308 A--GIVIMNPPYGERLGNVQKLEKTYAGMGNFLKNACPGYRGFIFTGNIELARKVGLKTR 365 Query: 361 KQYKAKNGPLDCVQKNYHVAEST 383 ++ N ++C Y + E + Sbjct: 366 RRLVFFNSGIECRLLEYELYEGS 388 >UniRef50_Q1JY11 Putative RNA methylase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY11_DESAC Length = 369 Score = 171 bits (433), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 116/347 (33%), Positives = 164/347 (47%), Gaps = 14/347 (4%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 +A A G E + EL++ V + GGV F G R +Y + +WSR ASRI++ LG+ Sbjct: 8 FYAIVAPGFESVCADELKSRLQVPVSIEHGGVTFHGKLRELYLANLWSRCASRIVVRLGD 67 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 LY + W PG V + + +S + +AI K Sbjct: 68 FNCRDFPTLYRKAVRLPWGRFLKPGTAIDVRTTCRQSRLNHSGRIGQTISEAI-----GK 122 Query: 124 NLPRPNVDRDAP-DIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 L P +D P ++ V L + I++D S + LH RGYR + AP++ETLAA + Sbjct: 123 ALGTPVSQQDTPFRQQILVRLDNDHCQISIDSSAERLHRRGYRQQMTPAPLRETLAAGCL 182 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 ++ W + LD +CGSGTL IEAAM+A + APG R + F W + +WQ + E Sbjct: 183 LQCHWNGDSDFLDALCGSGTLAIEAAMIAGELAPGRQR-VFAFQHWPGYRGNLWQSLLHE 241 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 A+ + R S SD D + I ARTNA+ AG+ + I FE Q + GP Sbjct: 242 AKHQQRTP----SITITASDQDEQAIHAARTNAKAAGVDQWIHFEQCPYQQQHS---SGP 294 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASP 349 G LSNPPYGERL L L F GW+ ++ P Sbjct: 295 QGLWLSNPPYGERLQQSQTTPQLLQALHAHFDANFSGWHGAMILPHP 341 >UniRef50_B0PDR5 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=B0PDR5_9FIRM Length = 406 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 119/373 (31%), Positives = 183/373 (49%), Gaps = 12/373 (3%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +L GLE +L E++ LG V G V F GD +V ++ +W R A R+ + +G Sbjct: 27 TLMCPCLFGLESVLSFEVKKLGGENIVVTDGRVTFDGDLSMVAKANIWLRTAERVGIVIG 86 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + + +L+ + W + F V +N + + +K A+V F Sbjct: 87 SFRAETFTELFDQTAELPWEQFIGEDDCFPVKGWSVNSKLFSMSDCQRIIKRAVVRRF-- 144 Query: 123 KNLPRPNVDRDAPDI-RVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 +N+ + + + ++ +HK+ ++ LD SG GLH RGYR A APIKETLAA I Sbjct: 145 ENVYHKTLFAETGALYQIQYSIHKDQVTLVLDTSGPGLHKRGYRANANDAPIKETLAAGI 204 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 V + + + + DPMCGSGTL+IE+A+ A + APG+ R R+ GW ++ E + Sbjct: 205 VDLARVRGDSLVFDPMCGSGTLVIESALRALNIAPGIRR-RFAAQGWRCFQNGLFDEARR 263 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 +A ++ R+ A + + + SD D ++ R NA AG+ I DVA LP+G Sbjct: 264 DAASQVRRD-APFEA--FASDIDPEAVRLTRENAAKAGVAGRIHVVQADVADFAPQLPEG 320 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPD--LLSCLQLRA 359 G VL+NPPYGER+ E AL LG + G S + SPD A Sbjct: 321 RSGIVLANPPYGERMLGEQEAQALSRTLGASFPKRDG---FSYYIISPDDGFEDLFGRPA 377 Query: 360 DKQYKAKNGPLDC 372 ++ K NG + C Sbjct: 378 ARRRKLYNGMIKC 390 >UniRef50_B5JRH4 Putative RNA methylase family UPF0020 n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JRH4_9BACT Length = 390 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 113/387 (29%), Positives = 186/387 (48%), Gaps = 9/387 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 ++ + + E+L EL++LG +V GV +GD + R R++ + Sbjct: 5 TILVTCPKACSEILAEELDSLGYKPSSLVSNGVFIEGDYEDCIHLNLTLRTGLRVLWEVD 64 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNP-GATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 DLY + W + A ++ S NDT+ N+ + +++KDAIVD Sbjct: 65 NFTARDGEDLYHQAVRMPWEDWIPAEDAYISIVSSVRNDTVVNTNFPNLRLKDAIVDRMR 124 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 RPN + + ++ H+E I LD SG + R YR G AP++E LAA++ Sbjct: 125 EVTGDRPNSGNERDRGVIFLYWHEEEVCIYLDTSGIPISNRNYRAMPGAAPMRENLAASV 184 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLH-RGRWGFSGWAQHDEAIWQEVK 240 + + W +P L+PMCGSGTL IEAA++A+ PG R + F + + + E++ Sbjct: 185 ISATRWDKASPFLNPMCGSGTLAIEAALMASG-VPGQQLRHEFAFQHFKPFNPKRYDEIR 243 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 E + R L SD D + I+ A TNA+ AG+ LI F V D P+P+ Sbjct: 244 KEVRKRVPDSLP---FPIIASDIDRQAIRAAETNAKKAGVAHLIEFRVCDFRDA--PIPE 298 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 P G ++ NP YGERL + L + +G + K + G+ +F+ + L + L+ Sbjct: 299 EP-GVIVLNPEYGERLGEQRQLEDTYKAIGDLFKKRCPGYWGYIFTGNKTLGKRVGLKTK 357 Query: 361 KQYKAKNGPLDCVQKNYHVAESTPDSK 387 ++ + NGP++C Y + T + K Sbjct: 358 RKIEFYNGPIECRLLEYELYGGTRNPK 384 >UniRef50_D1VVQ9 Protein YpsC n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVQ9_9FIRM Length = 378 Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 122/382 (31%), Positives = 190/382 (49%), Gaps = 24/382 (6%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 + A+T GLE L K EL ++G + +V G + G + V + R A RI + + Sbjct: 6 IIATTNFGLEALCKRELLDMGYNDLKVQDGRIELTGTYKDVCALNLNLRTAERIFMVVAS 65 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAV----HFS---GLNDTIRNSQYGAMKVKDAI 116 + S +L+ V I+WT N + F + H S L+D R S+ +K + Sbjct: 66 FEALSFEELFDKVYNIDWTYFLNEDSNFILLAKSHKSKLFSLSDIQRISEKAIIK---KL 122 Query: 117 VDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKET 176 + + + + N I++ V L + A+IA+D SGDGLH RGYR API ET Sbjct: 123 QNKYKKDWFSKSN-----ERIKIEVSLLDDIATIAIDTSGDGLHKRGYRQINYKAPISET 177 Query: 177 LAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 +AA++VM S W P PL DP CGSGT++IEAAM+ + APGL R ++ + + I+ Sbjct: 178 IAASMVMLSFWNPERPLADPFCGSGTIVIEAAMIGKNIAPGLMR-KFDLENFIFIPQEIF 236 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 +E K + + + + SD + I+ A+ N+ + G+ E I F KD+ L Sbjct: 237 KEEKRKCYEKID---YDKKLNINASDVSYKAIEVAKNNSAILGLDEDINFFQKDIRNLD- 292 Query: 297 PLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQ 356 + YG +++NPPYGERL + A L+ LGR+ K W+L + S Sbjct: 293 --LEDNYGVLITNPPYGERLAVKEAP-ELNRELGRLYKT-IPTWSLYAITGSETFQKDFG 348 Query: 357 LRADKQYKAKNGPLDCVQKNYH 378 +AD++ K NG + Y+ Sbjct: 349 KKADRKRKLYNGKIKTYYFQYY 370 >UniRef50_A9KSV9 Putative RNA methylase n=26 Tax=Bacteria RepID=A9KSV9_CLOPH Length = 380 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 112/370 (30%), Positives = 180/370 (48%), Gaps = 13/370 (3%) Query: 11 GLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDL 70 GLE +LK E+ +LG V G V F GD + ++ M+ R RI++ + + K + Sbjct: 13 GLEAVLKREITDLGYEIVSVEDGRVIFAGDETAICRANMFLRTTERILIKVAKFKAETFE 72 Query: 71 DLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNV 130 +L+ + + W + F V +I++ + ++ + A + V Sbjct: 73 ELFQNTKEVPWEQYIPKDGKFWV---AKATSIKSKLFSPTDIQSIMKKAMVERLKGVYKV 129 Query: 131 D---RDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGW 187 + + V V K+ +I +D SG LH RGYR API ETLAAA++M + W Sbjct: 130 EWFEESGNEYPVRVTFMKDEITIGIDTSGVSLHKRGYRKLISKAPITETLAAALIMLTPW 189 Query: 188 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRA 247 L+DP CGSGT IEAAM+ APGL+R + + W E EA Sbjct: 190 NKDCVLIDPFCGSGTFPIEAAMIGARIAPGLNRSFLAENWTDLIPKKAWYEAAEEANGMI 249 Query: 248 RKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVL 307 L + + G D D VI+ A+ NA +AG+ + I F+ + V++L++P YG ++ Sbjct: 250 ---LHDIEMNIQGYDIDGEVIKAAKQNAEVAGVDQYIHFQKRSVSELSSP---KKYGFII 303 Query: 308 SNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKN 367 +NPPYGERL+ + A+ ++ +G+ MK + W+ L ++ D + +AD+ K N Sbjct: 304 TNPPYGERLEDKSAMPPIYHEIGQAMK-RLDTWSSYLITSYEDAEKHIGRQADRNRKIYN 362 Query: 368 GPLDCVQKNY 377 G L Y Sbjct: 363 GMLKTYFYQY 372 >UniRef50_Q3A2B2 Predicted N6-adenine-specific DNA methylase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2B2_PELCD Length = 369 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 119/370 (32%), Positives = 173/370 (46%), Gaps = 18/370 (4%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 LFA TA GLE + EL++LG ++ QV +GGV F G +Y++ +W R ASR+++ LG Sbjct: 8 LFAVTALGLESVCARELKDLG-IKSQVCKGGVAFYGGLEQLYKANLWLRTASRVLVRLGS 66 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 DLY + W P + S ++++ V+ A A R Sbjct: 67 FGCKDFPDLYQKALRLPWGRFVKPDTDLQIKASSSRSRLQHTGRIVETVESAAHRALGRA 126 Query: 124 NLPRPNVDRDAPDIR--VNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 D A +R + V +++D SG LH RGYR G AP++ETLAA I Sbjct: 127 T------DSGA-GLRQLILVRFEDNRCVVSVDSSGPLLHRRGYRHMVGAAPLRETLAAGI 179 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 +M W TPL+DPMCGSGT ++E A++ RAPG R + F W ++ +W + Sbjct: 180 LMLLDWDARTPLVDPMCGSGTFVVEGALMGMRRAPGTAR-EFAFMQWPRYRPGLWHVL-- 236 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 QT+AR G D D VI A NA AG+ + F ++ + P+ Sbjct: 237 --QTQARSAEQSCLPPLLGYDRDPDVIDAAAGNASRAGVAAVTQFGKAELGE--GRFPER 292 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 P G ++ NPPYG RL + L L+ LG ++ G W ++ L L D Sbjct: 293 P-GFIMCNPPYGGRLGRDVRLTGLYRRLGEFYRSSGGVWQGAVLCPVGPLAKSLGEGFDC 351 Query: 362 QYKAKNGPLD 371 NG +D Sbjct: 352 IGLLNNGGID 361 >UniRef50_Q04TW7 N6-adenine-specific DNA methylase n=4 Tax=Leptospira RepID=Q04TW7_LEPBJ Length = 414 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 110/358 (30%), Positives = 176/358 (49%), Gaps = 15/358 (4%) Query: 6 ASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECK 65 AS GL LLK E+ G +GGV F+G + + + + ++S I + L K Sbjct: 52 ASCPDGLSGLLKEEILEAGLKIISENRGGVFFQGSVSALKEFALSTGISSGISISLKYWK 111 Query: 66 VYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNL 125 V S DLY + ++F P +F + S D++++S+Y K+KDAI D F K Sbjct: 112 VESPEDLYNQAVQFPFEKIFGPEYSFRID-STTKDSLKDSRYATYKLKDAIFDRFRSKGK 170 Query: 126 PRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRS 185 P V RD PD+ + H + A ++L L+ L RG+ G AP++E LA+A+V S Sbjct: 171 EPPKVSRDEPDLLFYLRSHSDHAKLSLGLNTRPLQQRGHGRSGGPAPMREILASALVRYS 230 Query: 186 GWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQT 245 GW + L DP CGSGT+++EAA+ + + G+ + + Sbjct: 231 GWNTRSVLYDPFCGSGTIVVEAAL------------KLLYGGYTNYRSLSSSLSFKKLFG 278 Query: 246 RARKGLAEYSS-HFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYG 304 + YS + SD + ++ AR NA+ AG+ LITF D A ++ K G Sbjct: 279 EPILNVKNYSEMKIFASDKNETILNLARQNAKNAGVDHLITFFESD-ATISENEKKISDG 337 Query: 305 TVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 +++NPPYG R+ ++ ++ G+ +K+ F G L+L LL L+L+ DK+ Sbjct: 338 FIVTNPPYGVRIGTKEEAKEIYVAWGKKLKDHFTGNILALACGDTSLLGFLKLKKDKE 395 >UniRef50_C7I387 Putative RNA methylase n=1 Tax=Thiomonas intermedia K12 RepID=C7I387_THIIN Length = 416 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 118/380 (31%), Positives = 183/380 (48%), Gaps = 15/380 (3%) Query: 4 LFASTARGLEELLKTELENLGAVECQV-----VQGGVHFKGDTRLVYQSLMWSRLASRIM 58 F RG+E L E++ L + GG+ +G + + RL SR++ Sbjct: 27 FFLPCPRGVEAALADEVKALAEHSPTLRAGTPTPGGLPVQGSLTDAMRLNLHCRLPSRVL 86 Query: 59 LPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVD 118 L G C D+Y + + W + F+ V + + + ++ A++VKD I D Sbjct: 87 LLGGSCSYADAEDIYHLARDLAWEKWFDVTQALRVDVTAERSPLASIKFAALRVKDGICD 146 Query: 119 AFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLA 178 F RP+VD PD+R+++ L + A + LD SG+ L RG+R G AP+KE LA Sbjct: 147 RFRALTGERPDVDTAHPDVRIHLHLREADALLYLDTSGEPLFKRGWRSEHGAAPLKEHLA 206 Query: 179 AAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 A ++ SGW PG L DP+CGSGTL+IEAA +A +RA GL R +GF D W Sbjct: 207 AGLLKLSGWTPGDVLFDPLCGSGTLVIEAAQMAANRAAGLARS-FGFEALQGFDMDAWNA 265 Query: 239 VKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 ++ +A+ R F+ +D D ++ NAR AG+ I + DV P+ Sbjct: 266 MREQARQAVRP---LTPGQFFAADIDPANVRMTLDNARRAGVDGAIAAQAGDVIAAVPPV 322 Query: 299 PKGPYGT-----VLSNPPYGERLDSE-PALIALHSLLGRIMKNQFGGWNLSLFSASPDLL 352 ++SNPPY ER+ E A L R +K +F GW+++L +A Sbjct: 323 DAAALPAGQAAWLISNPPYNERIAPEGQAADDFAPQLARTLKQRFAGWHVALLAADLHWD 382 Query: 353 SCLQLRADKQYKAKNGPLDC 372 L+L+ ++ NG ++C Sbjct: 383 KALRLKPRRRIVLFNGTIEC 402 >UniRef50_A4XLV3 Putative RNA methylase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XLV3_CALS8 Length = 370 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 112/371 (30%), Positives = 184/371 (49%), Gaps = 17/371 (4%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 LF +TA G+E + K EL LG + +V G + +GD + + + R A+R+ L + Sbjct: 3 LFIATAFGVESVTKEELVRLGYKDLKVENGRIFVQGDIEDIPRLNINLRTANRVFAILKK 62 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 K + +L+ G+ W E+ A + + + K AI++ +K Sbjct: 63 FKAETFDELFSGIYDFEWQEILPKDANILITGRSEKSKLFSISSCQSITKKAIIEKL-KK 121 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 + ++ + L +TA + D +G+ LH RGYR +AP+KE +AA +V+ Sbjct: 122 KYSVSWFEETGNLYKIEIALLNDTAYVLFDTTGESLHKRGYRKLQSLAPLKENIAATLVI 181 Query: 184 RSGWQPGTPLL-DPMCGSGTLLIEAAMLATDRAPGLHRGRWGF-SGWAQHDEAIWQEVKA 241 S W+P +L DP CGSGT+ IEAAM+A + APGL+R +G+ D +W + + Sbjct: 182 LSRWRPQQEVLWDPFCGSGTIPIEAAMIAKNIAPGLNRTFLAEQNGFVSQD--LWNKARL 239 Query: 242 EAQTRARKGLAEYSSHF--YGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 E G +Y+S F SD D ++I A+TNA+ AG+ + I F D ++ Sbjct: 240 EVI-----GKIDYNSKFNILASDIDEKMIYIAKTNAKAAGVEKDIRFFKADGRKIKKSSD 294 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 K G +++NPPYGER+D+ + L+ G+ +++ F GW + S +A Sbjct: 295 K---GIIITNPPYGERIDNSD-IFNLYRDFGKCLRD-FSGWRFFILSGYDKFEKAFGKKA 349 Query: 360 DKQYKAKNGPL 370 DK K NG + Sbjct: 350 DKNRKLYNGKI 360 >UniRef50_Q311V9 Putative uncharacterized protein n=2 Tax=Desulfovibrio RepID=Q311V9_DESDG Length = 393 Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 106/367 (28%), Positives = 172/367 (46%), Gaps = 7/367 (1%) Query: 15 LLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYL 74 LL TEL+ LG + GV + D + + R A+R++ + + LY Sbjct: 21 LLATELKALGFTPRNELPAGVEVQADLNDCMRMNLHLRTANRVLYQVAAFRARDADALYR 80 Query: 75 GVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDA 134 I+W P ++ S N TIR+S++ ++KDA+VD + RP+ Sbjct: 81 AASRIHWELFIAPEGYVSIASSVDNPTIRDSRFANQRLKDAVVDRIRSRTGRRPDSGPLQ 140 Query: 135 PDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLL 194 + + + H + + +D SG+ L RGYR AP++ETLAAA++M +GW G L+ Sbjct: 141 TGVVLFLHWHDDWCRLYVDTSGEPLSRRGYRKNPWKAPMQETLAAAVLMAAGWPGGGHLI 200 Query: 195 DPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV--KAEAQTRARKGLA 252 +PMCGSGTL +EA ++A + APGL R + F + IW + +AEAQ Sbjct: 201 NPMCGSGTLAVEAVLMAMNSAPGLLRDSFCFMHLPGYKPEIWDALLDRAEAQE-----TG 255 Query: 253 EYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPY 312 E +D ++ ++ NA AG+ I F V D Q P P ++ NP Y Sbjct: 256 EIPGRVIATDIVPEAVKASQENAVRAGVAGFIEFGVCDFTQTDIPQPSEGRDVIIMNPEY 315 Query: 313 GERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDC 372 G RL L ++ +G K + GG+ +F+ + L + LR ++ + ++C Sbjct: 316 GARLGDAAQLEGVYRAVGDFFKQRCGGYTGYVFTGNMKLAGNVGLRTSRRIPFHSAKIEC 375 Query: 373 VQKNYHV 379 Y + Sbjct: 376 RLLEYEL 382 >UniRef50_A3UEM0 Putative uncharacterized protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UEM0_9RHOB Length = 387 Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 111/368 (30%), Positives = 176/368 (47%), Gaps = 20/368 (5%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 +F + GLE L +EL G +C+ QGGV KG V+++ + R A+R++ L Sbjct: 25 IFLACPPGLESALASELAENGFAKCRPEQGGVTIKGGWAEVWRANLQIRGATRVLAVLDR 84 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 K L + W E+F+ G V S I + A +V +AI R Sbjct: 85 FKCQHLNQLEQLARQTPWPELFHAGTPVKVEASCRKSRIYHDGAAAERVANAIA----RT 140 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 L RD +I V V + + ++++D SG+ LH RGY+ AP++ET+AA ++ Sbjct: 141 AL---VAIRDDAEITVRVRIDHDVVTLSVDSSGEPLHKRGYKQAVAKAPLRETMAALLLR 197 Query: 184 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEA 243 G+ PLLDP+CGSGT +IEAA LA APG RG + F +A D + + Sbjct: 198 EMGYDGRAPLLDPVCGSGTFVIEAAQLAAGLAPGRARG-FAFERFASFDRDAFMAL---- 252 Query: 244 QTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPY 303 R R A + +G D D ++ A+ NA A + + +TF + L P Sbjct: 253 --RNRAPHARSDAPCFGFDRDPGAVRMAKENAERAEVSDRVTFSEGGLKDLKR--PDCAP 308 Query: 304 GTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQY 363 G V++NPPYG R+ + A+ ++ G +M++QF GW + + + L + Sbjct: 309 GWVVANPPYGARVGDKSAVFGVYKTFGAVMRDQFSGWRAAFITTDEKMAKATGL----AF 364 Query: 364 KAKNGPLD 371 + + P+D Sbjct: 365 ERTSAPID 372 >UniRef50_B1XYJ5 Putative RNA methylase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XYJ5_LEPCP Length = 440 Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 120/414 (28%), Positives = 191/414 (46%), Gaps = 51/414 (12%) Query: 2 NSLFASTARGLEELLKTELENL--------GAVECQVVQGGVHFKGDTRLVYQSLMWSRL 53 L+ A G+E LL E+ + A Q + GV G + + RL Sbjct: 9 TPLYLPCAAGVEPLLADEVRAILRAAGAEKAAESVQPGRAGVSLIGSPASAMRLHLECRL 68 Query: 54 ASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVK 113 A R++ + E + + DLY +++ W + P + V + + + + + ++++K Sbjct: 69 AQRVLWQVAEGPYHDEHDLYDLARSVAWGDWITPRQSLRVDTTAVRSPLHSLHFASLRIK 128 Query: 114 DAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPI 173 DA+ DA + RP+VD PD+ + + L A++++DLSG+ L RG+R+ G AP+ Sbjct: 129 DAVCDAMRDSHGERPDVDPRHPDLPLVLHLSDTHATLSIDLSGEALFKRGWREVQGEAPL 188 Query: 174 KETLAAAIVMRSGWQ---PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWA- 229 KETLAAA++ +GWQ PLLDP CG+GT+ IEAA +A APGL R + F A Sbjct: 189 KETLAAAMLAAAGWQGREADGPLLDPCCGAGTIAIEAAQIACGIAPGLQR-TFAFERLAP 247 Query: 230 -QHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEV 288 + + WQ++KAEA+ R + + Y D R+ A NA AG+ I F Sbjct: 248 FRAEAQAWQQMKAEARAR----VHAPAVRIYAGDVSFRMTDFATRNAERAGVLHAIDFRT 303 Query: 289 KDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALI------------------------- 323 D Q P G ++ NPPYGER+D++ + Sbjct: 304 GDALQRPAPTES---GVLMLNPPYGERIDAKGSGAARARDEAGDRLGPRADAGAREGFEG 360 Query: 324 -----ALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDC 372 A S L K + GW + S L ++L+ ++ NGP++C Sbjct: 361 GGTSGAFFSALAAHWKRNYSGWTAWVLSPDAKLPQAMRLKESRRVPMWNGPIEC 414 >UniRef50_B0S0R6 Methyltransferase n=2 Tax=Finegoldia magna RepID=B0S0R6_FINM2 Length = 373 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 117/380 (30%), Positives = 183/380 (48%), Gaps = 21/380 (5%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 + + A GLE L+K +L ++G V G + +GD + + + + R A R+++ LG Sbjct: 3 IIVTCAFGLESLVKRQLLDMGYENLNVNDGRIILEGDEKDIAKLNINLRCADRVLIELGN 62 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 K S L+ GV+ INW E+ + F V + + + + AI+ + +K Sbjct: 63 FKAVSFEQLFKGVEKINWLEILEADSNFIVEGRSYKSKLFSIKDCQSITEKAIIKSLQKK 122 Query: 124 NLPRPNVD---RDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 VD + R+ V L K+ SI LD SGDGLH RGYR+ + +API+E LAA Sbjct: 123 ----YKVDWFSKSKGRFRIEVSLVKDICSITLDTSGDGLHKRGYREESVLAPIRENLAAG 178 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWA-QHDEAIWQEV 239 I+ S PL+D CGSGT IEAA + APG+ R ++ F + + ++A QE Sbjct: 179 IIDLSFANSDRPLVDLFCGSGTFAIEAARKFRNIAPGIDR-KFDFINFNDKFNDAYKQE- 236 Query: 240 KAEAQTRARKGLAEYSSH--FYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 +T+A + + +Y + SD D I++A NA AG+ E I F +D N Sbjct: 237 ----RTKALESI-DYDKKIDIFASDVDGSAIEKAIANAENAGVREDIRFVTRD---FRNV 288 Query: 298 LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 + Y ++SNPPYG+RL ++ LG I +F + + + D Sbjct: 289 VLNDNYFVLISNPPYGKRLGERQEAEKIYKDLG-IKMAKFKTASQYIITDCEDFEKFYGK 347 Query: 358 RADKQYKAKNGPLDCVQKNY 377 ++ K K NG + C Y Sbjct: 348 KSSKNRKMYNGNMKCYLYQY 367 >UniRef50_Q1CZM0 RNA methylase family protein n=2 Tax=Cystobacterineae RepID=Q1CZM0_MYXXD Length = 383 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 128/375 (34%), Positives = 188/375 (50%), Gaps = 21/375 (5%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 LF ST GLE L+ E LG + + V GGV +G L + + R ASR++L LG Sbjct: 14 LFVSTLPGLEPALEAEASALG-WKPRRVDGGVELEGPAGLHQDANLRLRCASRVLLRLGH 72 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 + L + ++ + +++ + + S LN R+ G V A A+ Sbjct: 73 FRAGDSDTLSDRLAELDLSHVWDGRSPPKLSVS-LN---RSPVPGPDVVFSAAAYAWNVP 128 Query: 124 NLPRPN-VDRDA--PDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 ++ R +D + P + + V + + +++ D SGD LH RGYR AP++ETLAA Sbjct: 129 SVERAGPLDEEGGGPGLTLLVRVDGDAFTVSADTSGDALHRRGYRQEVSRAPLRETLAAG 188 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 I+ +G+ PL+DPMCGSGT L+EAA +A RAPGL R + F + D W K Sbjct: 189 ILRLAGYDGTQPLVDPMCGSGTFLVEAAWMAMRRAPGLLRA-FAFESFPSFDAQAWAGRK 247 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 A A+ A L + +G D +A + AR NAR AG+ + E +D L P+ K Sbjct: 248 ARAEADA---LPAPGAAIHGYDINAGSLGTARRNARRAGV--TLALERQDARTLKAPV-K 301 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPD---LLSCLQL 357 GP G V+ NPPYG+R+ L AL+ LG ++ F GW ++ PD L+ L L Sbjct: 302 GP-GLVVVNPPYGKRVGEAEDLPALYRALGNTLRQGFAGWRAAVI--LPDEAALVKALGL 358 Query: 358 RADKQYKAKNGPLDC 372 + KNG L C Sbjct: 359 TGARSLPVKNGGLKC 373 >UniRef50_C2BEE4 Site-specific DNA-methyltransferase (Adenine-specific) n=2 Tax=Anaerococcus RepID=C2BEE4_9FIRM Length = 373 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 103/321 (32%), Positives = 167/321 (52%), Gaps = 18/321 (5%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M + ST+ GLE L+K +L++LG + +V G + +GD + + + R A R+ L Sbjct: 1 MEKILISTSFGLESLVKFQLKDLGYKDFKVSDGLISLEGDLSDLAKLNINLRHADRVYLE 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVH---FSGLNDTIRNSQYGAMKVKDAIV 117 L K +L+ V+ I+W ++ N + F V+ + ++R+ Q + K AI+ Sbjct: 61 LASFKAMDFEELFENVKKISWQDILNEDSNFIVNARTYKSKLFSLRSIQSISEK---AII 117 Query: 118 DAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETL 177 D + + ++ A + + + + + LD SG+GLH RGYR+ + AP++E L Sbjct: 118 DKL-KVYYKKSFFEKKAERVNIEIMIENNLVRVCLDTSGEGLHKRGYRENSVKAPLRENL 176 Query: 178 AAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 AAA+V S + P L D CGSGT+LIEAA +A + APG+ R + F+ + + ++ Sbjct: 177 AAALVDLSFYNPDRFLFDGFCGSGTILIEAARIARNIAPGIDRD-FDFTSFKFINPKFFK 235 Query: 238 EVKAEAQTRARKGLAEYSS--HFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLT 295 + K EA + +YS + GSD R I A+ NA AG+ E I+F +D + Sbjct: 236 DAKKEAMDK-----IDYSKKLNILGSDISGRAISLAKQNAINAGVEEDISFITRDFGSVA 290 Query: 296 NPLPKGPYGTVLSNPPYGERL 316 YG +SNPPYG RL Sbjct: 291 ---ISNDYGVFISNPPYGLRL 308 >UniRef50_Q0F3C8 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3C8_9PROT Length = 376 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 116/367 (31%), Positives = 186/367 (50%), Gaps = 14/367 (3%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 N FA T G+E + EL L A E + GGV F + + + +R +R++L L Sbjct: 12 NHFFAITPPGMEAIAAAELAALSAHEINPIAGGVEFTASMDTMMRINLRARCITRVLLRL 71 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 K S +LY + I+W G+ A+ S + +S +V+ A+ DA Sbjct: 72 ASFKALSFPELYNKSKRIDWQRYLAEGSAVALRASCHGSRLLHSG----RVEQAVFDAI- 126 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 R + D ++ V + K+ +I++D SG+ L RGYR +G+AP++ET+AAAI Sbjct: 127 RDGSIQVTAGEDEGGQQILVRVDKDQCTISIDCSGERLDRRGYRLHSGMAPLRETIAAAI 186 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + WQP LL PMCGSGT IEAA++A +A G + F W E WQ VK Sbjct: 187 LQWIDWQPEEVLLTPMCGSGTFAIEAALMAAKKAAGSTHD-FAFLHWPCLKEKRWQRVKE 245 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 +++ + + SD D R++ +AR NA AG+ LI + V D+A+L +P Sbjct: 246 KSEAMV---VGQPKVQILASDLDGRMLAQARQNANDAGVAGLIDYSVLDIAKL---MPTA 299 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 G +L NPPYG R++++ A+++ LG++ + +F GW + + L + + Sbjct: 300 ANGLILVNPPYGGRIEADAR--AVYAQLGKLFRERFSGWRMVVVVPDQGCERALAMPVKR 357 Query: 362 QYKAKNG 368 + K K+G Sbjct: 358 RLKVKHG 364 >UniRef50_A8SGD5 Putative uncharacterized protein n=3 Tax=Ruminococcaceae RepID=A8SGD5_9FIRM Length = 439 Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 130/386 (33%), Positives = 179/386 (46%), Gaps = 22/386 (5%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 L A G E K EL +GA +V G + F G ++ + + R R+ML L Sbjct: 48 LIAPCFFGCESTAKFELTRIGAENIRVEDGRLSFCGGAEMIAAANLNLRTVERVMLLLAR 107 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 K + +L+ GV +I W E A F V S LN + + +K A+V + Sbjct: 108 YKATTFDELFDGVYSIPWEEFLPADAAFPVTGSSLNSQLTSIPACQSVIKKAVVKRLMKG 167 Query: 124 N----LPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAA 179 + LP V + +V L K I LD +G+GLH RGYR A AP++ETLAA Sbjct: 168 HRTTVLPESGV-----EYKVRFMLRKNVCEIMLDTTGEGLHKRGYRRNAMEAPLRETLAA 222 Query: 180 AIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW--Q 237 I + + + DP CGSGTLLIEAA A + APGL R R+ ++ A+W Q Sbjct: 223 TIADLGRVRRDSLVEDPFCGSGTLLIEAAQKAMNIAPGLKR-RFAAERYSFVPAALWAEQ 281 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 KA A+++ G +G D D + +A NA+LAG+ FEV DVA Sbjct: 282 RQKALAESKLDVGF-----EAFGYDIDPAAVAQANVNAKLAGVENRCHFEVADVATFA-- 334 Query: 298 LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 P VL+NPPYGERL + L LG+ M+ L +A D Sbjct: 335 --AKPEAIVLTNPPYGERLGTIEGAAKLARTLGQQMEAS-PCAGLYAITADMDFELHYGK 391 Query: 358 RADKQYKAKNGPLDCVQKNYHVAEST 383 RA+K+ K NG + C Y+ A T Sbjct: 392 RANKRRKMYNGMIPCQLYMYYNAPKT 417 >UniRef50_C7HSK3 Methylase n=3 Tax=Anaerococcus RepID=C7HSK3_9FIRM Length = 376 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 100/318 (31%), Positives = 159/318 (50%), Gaps = 12/318 (3%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M + +T+ G+E L+K +LE +V+ G + G+ + + R A RI L Sbjct: 1 MEKIIITTSFGMESLIKRQLEEENYKNFEVLNGKIILNGNLDDIGYLNLNLREADRIFLE 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + + +L+ ++ I+W + F V+ + + + AI+D+ Sbjct: 61 IEYFTAKTFEELFENIKKIDWFDYLKIDDNFIVNARTYKSKLFSIPSIQSISEKAIIDSL 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RK + ++V + + K+ S+ LD SGDGLH RGYR + API+E LAA Sbjct: 121 KRK-YKISTFKKSGSRVQVEIMIEKDKVSVCLDTSGDGLHKRGYRQGSVKAPIRENLAAG 179 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +V S ++ L D CGSGT+LIEAA + APGL R + F+ + +D+ ++++K Sbjct: 180 LVDLSFYKDDRFLFDGFCGSGTILIEAARKERNIAPGLDRD-FDFTSFKFYDKKRFEKIK 238 Query: 241 AEAQTRA--RKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 EA + RK + + GSD + I+ A+ NA AG+ E ITF KD + Sbjct: 239 KEAYEKIDYRKKI-----NILGSDISKKAIELAKNNALNAGVYEDITFLNKDFKDIN--- 290 Query: 299 PKGPYGTVLSNPPYGERL 316 K +G +SNPPYGERL Sbjct: 291 LKNNFGIFISNPPYGERL 308 >UniRef50_B8LLK7 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LLK7_PICSI Length = 532 Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 122/427 (28%), Positives = 190/427 (44%), Gaps = 56/427 (13%) Query: 4 LFASTARGLEELLKTELEN--LGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 FA+ A GLE+++ EL + +GA + GGV+F+G Y + +W R R++L L Sbjct: 95 FFATCAPGLEQVVAAELGSPLIGATGIKEGSGGVYFQGTLSTGYSANLWLRCGIRVLLEL 154 Query: 62 GECKV-YSDLDLYLGV--QAINWTEMFNPGA------------TFAVHFSGLNDT-IRNS 105 ++ D D A++W + TFAV + T + NS Sbjct: 155 SYAEMPKKDRDCVYNFVRNAVDWPQYLASSTLKKSGYKRWKFRTFAVQSRVWDCTQVTNS 214 Query: 106 QYGAMKVKDAIVDAFTRK-NLPRPNVDRDA---PDIRVNVWLHKETASIALDLSGDGLHL 161 +++ KDAI D+ N RP+ + D+ + + L+++ A + D+SG LH Sbjct: 215 MSASIRTKDAICDSIRDACNNKRPDPPEEGGAKADVPLFLSLYRDKAVLYKDMSGVSLHR 274 Query: 162 RGYRDRAGIAPIKETLAAAIVMRSGWQP------------------GTPLLDPMCGSGTL 203 RGYRD A + E +AA I+ +GW LLDPMCGSGT Sbjct: 275 RGYRDVMHRASLSEAVAAGILTLAGWNTRVQGLGVANKNGGLESLENMVLLDPMCGSGTF 334 Query: 204 LIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV---KAEAQTRARKGLAEYSSHFYG 260 LIEAA++A +RAPGL R W F W D W+E + A T GL G Sbjct: 335 LIEAALMAANRAPGLTRKTWPFKSWHDFDSVSWKECWQNASSAATPIPPGL-----RLLG 389 Query: 261 SDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSE- 319 +D + +A AG+ E++ KD + P V+ NPP+G RL +E Sbjct: 390 NDKHEGALSLCARDAEAAGVKEVLELSCKDCRDYS---PSVTPTLVVVNPPWGFRLGNEG 446 Query: 320 ----PALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQK 375 + + LG+ K ++ + S L+++ADK++ G ++C Sbjct: 447 ENDHEGVESTWEALGQFSKQHCNNADMYILSGKSTATRELRMKADKKWPITMGGVECRLL 506 Query: 376 NYHVAES 382 +Y+V S Sbjct: 507 HYYVLPS 513 >UniRef50_A3VSE9 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSE9_9PROT Length = 431 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 112/359 (31%), Positives = 187/359 (52%), Gaps = 12/359 (3%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 +F ++ G E++L+ E +LG + V GGV F G V+++ + S +ASR+++ L + Sbjct: 55 IFLASVPGGEDILRQEALSLGFAHPRAVPGGVRFTGGWSHVWRANLASAVASRVLVRLAQ 114 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAI----VDA 119 + L + A +E+ +P V I +S A ++ +A+ V+A Sbjct: 115 FEAPDLKRLAHQLAAFPLSEVRSPLGPVRVEAQCAKSKIFHSGAAAQRLIEALDQHGVEA 174 Query: 120 FTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAA 179 P + P R+ + L + A+++LD +G LH RG + G AP++ETLA+ Sbjct: 175 VEGGE---PQSPDEVPVPRLMLRLDHDRATLSLDTTGTPLHRRGLKRDVGRAPMRETLAS 231 Query: 180 AIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 + ++ WQP LLDP CGSGT L+EAA AT + G R R+ F G ++EV Sbjct: 232 HFLHQAAWQPEEALLDPFCGSGTFLLEAAGRATGKLAGRGR-RFAFEGLQSFAPDSFEEV 290 Query: 240 -KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 KA A+ A + + +GSD D I A+ NA A + + + FEV+ ++ + P Sbjct: 291 AKATAERLAPQKTPALA--LWGSDLDPTTIAAAKANAARAALADQLHFEVRGISDVAPP- 347 Query: 299 PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 P G +L+NPPYGERL AL L++ G++++ +FGGW + + ++ L + +L Sbjct: 348 PGLAAGLILTNPPYGERLGDPQALRHLYATFGKVLRERFGGWRVGVITSDERLAAATRL 406 >UniRef50_B7QQX4 RNA methylase family protein n=35 Tax=Rhodobacterales RepID=B7QQX4_9RHOB Length = 376 Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 102/357 (28%), Positives = 175/357 (49%), Gaps = 17/357 (4%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 +F + GLE+ L E + LG E + V GGV +G V+++ + R A+R++ +G Sbjct: 9 IFLTAPPGLEQTLLHEAKELGFAEPKTVPGGVTVQGGWPDVWRANLCLRGAARVLARIGS 68 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFS-GLNDTIRNSQYGAMKVKDAIVDAFTR 122 + + L + W+E+ V + I ++ +++ AI + Sbjct: 69 FRAFHLAQLDKRARKFPWSEVLRADVPVRVETTTNKKSKIYHAGAATQRIERAITEELGA 128 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + + +A I + + + + ++D SG+GLH RG++ G AP++E LAA + Sbjct: 129 E------ISAEA-GITIKLRIEDNLCTFSVDTSGEGLHKRGHKTAVGKAPMRENLAALFL 181 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 G+ P++DPMCGSGT +IEAA +A PG R + F A D W ++ Sbjct: 182 RDCGYTGTEPVVDPMCGSGTFMIEAAEIARGLLPGRSR-NFAFEQLATFDADAWAAMRDV 240 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP-LPKG 301 T+ + YGSD +A ++ A NA AG+ +L+ + V+ LT P L +G Sbjct: 241 TTTQ------DTDVWCYGSDRNAGAVEMAAANAERAGVADLVQITQQAVSDLTPPDLGEG 294 Query: 302 PY-GTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 G V+ NPPYG R+ ++ L AL++ LG +K++F GW + + ++ L L Sbjct: 295 EQPGLVIVNPPYGARIGNKKLLYALYAALGETLKSRFSGWRVGIVTSETSLAKATDL 351 >UniRef50_A4SVE4 Putative RNA methylase n=2 Tax=Polynucleobacter necessarius RepID=A4SVE4_POLSQ Length = 485 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 117/426 (27%), Positives = 169/426 (39%), Gaps = 91/426 (21%) Query: 33 GGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFA 92 GGV G + SR+ASR++L + + + DLY + W + F T Sbjct: 45 GGVGLAGPLSAAMALNLHSRIASRVLLQMAQAPYRQEEDLYKLASGLAWEDWFTSKQTLR 104 Query: 93 VHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIAL 152 V + +++ + +K+KDAIVD RP++D PD+RV L +I L Sbjct: 105 VDVTAHRSPLKSLNFATLKIKDAIVDRLRDVTGDRPSIDTAFPDVRVQAHLTATQVTIYL 164 Query: 153 DLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLAT 212 D SG+ L RG+RD G AP+KE LAA I+ +GW+ G L DPMCGSGT LIEAA Sbjct: 165 DTSGEALFKRGWRDEKGDAPLKENLAAGILSITGWKSGEILFDPMCGSGTFLIEAAQKTL 224 Query: 213 DRAPGLHRGR----------------------WGFSG------------WAQHDEAIWQE 238 PG R +GF WA E E Sbjct: 225 AIPPGAIRAGMYGDDAKPSRLAYRPLVTSVHGFGFQRLKPFNEVAEQKRWAALKEGSLNE 284 Query: 239 VKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 + A+ R + AE S G D + +++ + N + A + E D A + P Sbjct: 285 ILAQ---RKQYPSAE-SLRISGGDINEKLVAMFKGNWQRAQLPEQPVVRQID-ALASRPP 339 Query: 299 PKGPYGTVLSNPPYGERL------------------------------------------ 316 G +L NPPYGERL Sbjct: 340 VNSDSGVMLLNPPYGERLVIKGGRGQDRNAQESYDESEEPENRFELNLETGRQSAKRSSR 399 Query: 317 ----------DSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAK 366 + +P + G+ +K FGGWN+ + +A L L+++ K+ Sbjct: 400 ESLKKLQAQEEQDPKFVEFLRQFGQHLKEAFGGWNIFVLTADMALPGQLRIKESKRTPLF 459 Query: 367 NGPLDC 372 NGPL+C Sbjct: 460 NGPLEC 465 >UniRef50_B9MKJ8 Putative RNA methylase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MKJ8_ANATD Length = 371 Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 111/380 (29%), Positives = 176/380 (46%), Gaps = 29/380 (7%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M LF +T G E + K EL LG +V G + + + + + R +RI Sbjct: 1 MIELFVATPLGTESVAKEELVRLGYKNLKVENGRIFVSAELEDIPKLNINLRTPNRIFAI 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L + K + +L+ GV + +W E+ A V + + + K AIV+ Sbjct: 61 LNKFKAKTFDELFDGVYSYSWHEILPKDAKILVTGRTEKSKLVSIRACQSITKKAIVEKL 120 Query: 121 TRK---NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETL 177 K NL + ++ + + + A + D +GD LH RGYR AP+KE + Sbjct: 121 KSKYSVNL----LGETGQLFKIEIAMINDIAYLLFDTTGDSLHKRGYRKLISKAPLKENI 176 Query: 178 AAAIVMRSGWQPGTPLL-DPMCGSGTLLIEAAMLATDRAPGLHRGRW----GFSGWAQHD 232 AA +++ + W+ + DP CGSGT+ IEAAM+A + APG++R GF Sbjct: 177 AATLILLAKWKDDEEVFWDPFCGSGTIAIEAAMIARNIAPGINRTFLAEENGFIS----- 231 Query: 233 EAIWQEVKAEAQTRARKGLAEYSSHF--YGSDSDARVIQRARTNARLAGIGELITFEVKD 290 IW++ + EA R +Y F SD D +I A+ NA+ G+ + I F D Sbjct: 232 PQIWKKSRLEAIER-----IDYQKKFEILSSDIDENMIHIAKVNAKEIGVDKDIRFFRAD 286 Query: 291 VAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPD 350 ++ P K G +++NPPYGER+D + + L+ GR +K F W+ + SA Sbjct: 287 ARKIKKPSEK---GIIVTNPPYGERID-DINIFELYRDFGRCLKT-FDNWHFFVLSAYSK 341 Query: 351 LLSCLQLRADKQYKAKNGPL 370 + +ADK K NG + Sbjct: 342 IEKAFGRKADKNRKLYNGKI 361 >UniRef50_A0LJ49 Putative RNA methylase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LJ49_SYNFM Length = 411 Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 112/380 (29%), Positives = 172/380 (45%), Gaps = 19/380 (5%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 ++ A T L L + E E G + GV F G+ Y++ +W R ASRI+ Sbjct: 27 VHRFAAVTPPELAALCRQEAEMAGFDVTGLSDAGVEFTGNFGACYEANLWLRTASRILCR 86 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L + +L+ V I W N V + I + V D + F Sbjct: 87 LPAFRAGVREELFGKVSGIPWELWLNRSVPVRVETHVEHSRINHEGMVLETVLDGLRRRF 146 Query: 121 TRKNL-PRPNVDR-----------DAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRA 168 K + P P DR ++ R+ V L + ++LD +GD LH RGYR R Sbjct: 147 REKGIVPPPEWDRSRGQPGSESDENSRKQRILVRLVRNHCELSLDTTGDHLHRRGYRMRH 206 Query: 169 GIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGW 228 API+ETLAAAI+M++GW TPL+D MCG+GT +EAA+LA PGL R + F W Sbjct: 207 AGAPIRETLAAAILMKAGWNGNTPLVDGMCGAGTAAVEAALLARRMPPGLGRS-FLFQSW 265 Query: 229 AQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEV 288 + E W+ + +A+ K A ++ D D R + AR NAR A + I + Sbjct: 266 PSYREKTWEFLLRKARE---KMSAHPAAPIVALDRDPRALAVARENARKAHTEKEIIWRE 322 Query: 289 KDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSAS 348 +D G ++ +PPYG+RL H LG ++ + GW +++ Sbjct: 323 EDFFDFQPARMGLSEGLLILDPPYGKRLPGPDR--GFHERLGAHLRRLYTGWRIAVLCPE 380 Query: 349 PDLLSCLQLRADKQYKAKNG 368 ++ +RA + ++ +G Sbjct: 381 RG-IAVTGIRAVRYWRIVHG 399 >UniRef50_B8FK67 Putative RNA methylase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FK67_DESAA Length = 392 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 98/360 (27%), Positives = 170/360 (47%), Gaps = 7/360 (1%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 ++ F T+ GLE++ ++ +LG +GGV F+G +Y++ + LA+R+++ + Sbjct: 15 HTFFIPTSLGLEKICAKQVRSLGLEASASGEGGVTFQGKLTDMYKACLHLSLANRVLMRI 74 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNP-GATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 E K L V+ I W E++ P + + +SQ A +V+ AI+ Sbjct: 75 HEFKAAHFAALENAVEGIPW-ELYLPLSCPINFRVTARKSKLYHSQAIAERVEKAILQHL 133 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + + AP + V + ++++D G+ LH RG+++ G API+ETLAAA Sbjct: 134 EKYGERVEGAEEPAPQ-EIFVRAVSDRFTLSIDACGELLHKRGFKESEGRAPIRETLAAA 192 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 I+ +G+ PL+DPMCGSG EAA++A + PG +R + F W + W ++ Sbjct: 193 ILEFAGYDGTLPLMDPMCGSGAFSTEAALIAANIPPGWNRD-FAFFSWPAFKKQQWLYLR 251 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 ++A+ + + + SD D G+ ++ +D+ +LT P Sbjct: 252 SQAEKQFKNITQPL---VFASDIDQNACSLLLETLESQGLDRIVKVSNEDILRLTPPKQV 308 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G ++ NPPYG RL + P L + L + +QF GW L+ D L A Sbjct: 309 SNPGLIVVNPPYGLRLGTVPQARELFASLCNRLADQFQGWTLAALVPHKDWTPLLPFSAQ 368 >UniRef50_A2SC20 N6-adenine-specific DNA methylase-like protein n=2 Tax=Burkholderiales RepID=A2SC20_METPP Length = 779 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 110/322 (34%), Positives = 164/322 (50%), Gaps = 8/322 (2%) Query: 2 NSLFASTARGLEELLKTELENL-GAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 +SLF A G+E LL E+ L Q +GGV +G R + SRLA R++ Sbjct: 27 SSLFLPCAAGVEALLADEVARLLPGAAAQTQRGGVMVRGGPREAMALNLGSRLAQRVLWQ 86 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + + S+ DLY ++ W + P T V + +++ + A+++KD + DA Sbjct: 87 VADAPYRSEDDLYALARSPRWPDWITPTQTLKVDVTAQRAPLKSLNFAALRIKDGVCDAM 146 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RP+VD PD+ + + L E A++ +D SG+ L RG+R+ G AP+KETLAAA Sbjct: 147 RDALGARPSVDTRRPDLPLLLHLAPEHATLYVDTSGEALFKRGWREDQGEAPLKETLAAA 206 Query: 181 IVMRSGWQ---PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 ++ +GWQ PLLDP+CGSGT+ IEAA +A APG R R+ F +A Q Sbjct: 207 MLAAAGWQGREADGPLLDPVCGSGTIAIEAAQIACGIAPGSLR-RFAFERLGPFRDAGTQ 265 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 E + AR + + + D R+ A NA AG+ I + D Q P Sbjct: 266 RAWRELREAARAAVHASAVPIFAGDVAFRMTDFAARNAARAGVAAAIELKTVDALQRAAP 325 Query: 298 LPKGPYGTVLSNPPYGERLDSE 319 + GT++ NPPYGER+D + Sbjct: 326 AER---GTLMLNPPYGERIDPK 344 >UniRef50_C1A5B5 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5B5_GEMAT Length = 406 Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 110/378 (29%), Positives = 165/378 (43%), Gaps = 17/378 (4%) Query: 5 FASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGEC 64 F A GL L+ E LG +V GV + R ++ WSRLASR+++ L Sbjct: 22 FLIAAPGLAPLIAAECTTLGITPVEVTAAGVAVQVTPRELFTINCWSRLASRVIVRLAHF 81 Query: 65 KVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKN 124 L + WT + +P + + + +S A +V IV+A Sbjct: 82 DARDFATLEKQAARVPWTRVISPAVPVQLRVTCRKSRLYHSDAVAERVARGIVNAVPNAQ 141 Query: 125 LP-----------RPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPI 173 + + DAP + V ++ I+ D SG LH RG+R AP+ Sbjct: 142 ILGAAAKDEDDELSETLAPDAPTQLIVVRFERDHCVISADSSGTLLHRRGWRQAIAKAPL 201 Query: 174 KETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDE 233 +ETLAA ++ W PL+DP GSGT+ IEAA+ APGL R + W D Sbjct: 202 RETLAAVMLAAMPWDGEIPLVDPFAGSGTIGIEAALRVRRIAPGLTRS-FAMEHWPDADA 260 Query: 234 AIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQ 293 ++ V+ AQ + R + D DA I AR NA AG+ +T E +++ Sbjct: 261 SMHAGVRESAQQQVRPSI---GVPIVLRDRDAGAIVAARANAERAGVLADVTIEQGALSE 317 Query: 294 LTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASP-DLL 352 T G G +L+NPPYG R+ L L++ LG +++ GW L++ + LL Sbjct: 318 -TELAQYGARGLLLTNPPYGHRIGDGADLRGLYARLGDVLRVGGRGWRLAMLMPNDRALL 376 Query: 353 SCLQLRADKQYKAKNGPL 370 L+L + NG L Sbjct: 377 GQLRLSVSPLLRTSNGGL 394 >UniRef50_C0QIM2 Putative N6-adenine-specific DNA methylase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QIM2_DESAH Length = 391 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 95/357 (26%), Positives = 160/357 (44%), Gaps = 19/357 (5%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQ---VVQGGVHFKGDTRLVYQSLMWSRLASRIM 58 + FAST GL+++L E L +E + + +GGV F G + Y + ++ ASRI Sbjct: 19 QTFFASTTPGLKQILAAEFAAL-PLETEHFTMAEGGVVFTGPMKSCYLANLYLGTASRIT 77 Query: 59 LPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAV----HFSGLNDTIRNSQYGAMKVKD 114 + + E K + L + + W + V H S L T + ++D Sbjct: 78 MEVAEFKAENFRTLEKKLAQVEWELFLKKRSHIHVEATTHHSRLYHTRAIEERAVQIIQD 137 Query: 115 AIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIK 174 + ++ P ++ + + + I+LD SGD LH RG G+AP++ Sbjct: 138 HL-------DMAAPESPGAPASYKILIRVRDDRFFISLDTSGDLLHKRGLTSAVGMAPLR 190 Query: 175 ETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEA 234 TLA +I++R+G+ PL+DPMCGSG+ L+E AM+A+ PG +R ++ F + +A Sbjct: 191 STLARSILIRTGFSGREPLMDPMCGSGSFLVEGAMMASQIPPGFYR-QFAFEHFPCFSQA 249 Query: 235 IWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQL 294 W +K A+ R + +G D +I G L+ + +D L Sbjct: 250 QWNHLKKTAEKNFRN---VETPLIFGFDQAGNLIAGLEQTLSDHGFSGLVQVDKQDFFDL 306 Query: 295 TNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDL 351 G V+ NPPYG+RL + + +G + F GW + + P+L Sbjct: 307 GPKDFTDQAGVVVLNPPYGKRLGEKGETAEFYKRIGDKLARNFQGWRVGILLPEPEL 363 >UniRef50_D2EHY6 N6-adenine-specific DNA methylase (Fragment) n=6 Tax=Bacteria RepID=D2EHY6_PEDAC Length = 228 Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 79/217 (36%), Positives = 114/217 (52%), Gaps = 1/217 (0%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 L A+ A GLE L K EL++LG + Q G V F+G V ++ +W R A RI + +GE Sbjct: 6 LLATMASGLESLTKNELKDLG-YDVQTENGRVRFEGTFEDVIRTNLWLRTADRIKIIVGE 64 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 K + +L+ V+A+ W E+ F V+ + + K AIV+ Sbjct: 65 FKAVTFDELFEQVKALPWDELIPINGAFPVNGKSKKSQLHSVPDVQAITKKAIVEKLREV 124 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 R + + V + K+ I LD +GD L RGYR G AP+KET+AAA+VM Sbjct: 125 YHWRNQLPETGAKYGLEVSIDKDHVLITLDTTGDSLFKRGYRLYKGSAPLKETMAAALVM 184 Query: 184 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHR 220 + W PL+DP CGSGT+ IEAA++ + APG +R Sbjct: 185 LTNWHADKPLVDPFCGSGTIPIEAALIGQNIAPGFNR 221 >UniRef50_A4SA02 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4SA02_OSTLU Length = 419 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 117/427 (27%), Positives = 198/427 (46%), Gaps = 60/427 (14%) Query: 4 LFASTARGLEELLKTELEN--LGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 +A+ GLE+++ EL + + A + + + GV F G R+ Y + +W R A R+++ L Sbjct: 2 FYATCHPGLEDVVARELASPMINASDIVIGKSGVSFTGTQRVGYDANVWLRSAVRVLVEL 61 Query: 62 GECKVYSDLDLYL-GVQ--------AINWTEMF-----NPGATFAVHFSGLNDT--IRNS 105 LD Y+ G Q A+ W E+ G F V + L D I +S Sbjct: 62 KR----GYLDPYVSGTQSVYEFVKHAVPWEEVIPGGERGDGLKFGVE-TRLWDCSQITSS 116 Query: 106 QYGAMKVKDAIVDAFTRKNLPRPNVDRD--APDIRVNVWLHKETASIALDLSGDGLHLRG 163 ++VKDA+ DA RP+ + A D+ + V L+++ + D+SG+ LH RG Sbjct: 117 HAAKIRVKDAVCDALVDATGTRPSPPDNYAAADVPLYVTLYRDEIIMYRDMSGESLHRRG 176 Query: 164 YRDRAGIAPIKETLAAAIVMRSGW-------------QPGTPLLDPMCGSGTLLIEAAML 210 YR+ A + E+ AA ++ +GW P L+DPMCGSGT LIE A++ Sbjct: 177 YRNAMHRASLSESAAAGMLSLAGWPDMLEEWQRDPAGSPPPVLIDPMCGSGTFLIEGALM 236 Query: 211 ATDRAPGLHRGR---WGFSGWAQHDEAIWQEV-----KAEAQTRARKGLAEYSSHFYGSD 262 A + APGL R + F W H+ ++E + A+TR G+D Sbjct: 237 AANVAPGLIRSETIGYAFERWPDHNPRTFEECLENARRIGAETRT---AVPTPPVIIGND 293 Query: 263 SDARVIQRA---RTNARLAGIGELI-----TFEVKDVAQLTNPLPKGPYGTVLSNPPYGE 314 + A AR+AG+ ++ F + + P P V++NPP+G+ Sbjct: 294 IHPGAVTLAGQGSETARVAGMIDVFRNDCEMFNITASSAGAKIAPNAPK-LVVTNPPWGK 352 Query: 315 RLDS-EPA-LIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDC 372 R+ + EPA + + LG +K + + + S +P++ +++RA +++ G +DC Sbjct: 353 RIGAGEPAGRRRVWNSLGVFLKRECPDSSAFVLSGNPEVSRAIRMRASRKHVVGIGGVDC 412 Query: 373 VQKNYHV 379 Y + Sbjct: 413 RLLRYDI 419 >UniRef50_UPI0001621339 predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=UPI0001621339 Length = 698 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 107/417 (25%), Positives = 176/417 (42%), Gaps = 59/417 (14%) Query: 1 MNSLFASTARGLEELLKTELEN--LGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIM 58 + S +A+ +GLE++L EL + + A + + GGV F+G Y + +W R R++ Sbjct: 90 LQSFYATCEKGLEQILAAELSSPLINASQVETDSGGVFFRGTQSTGYNANLWLRTGDRVL 149 Query: 59 LPLGEC-----KVYSDLDLYLGVQAINWTEMFNPGAT----------------------F 91 L C K DL +A +W + + F Sbjct: 150 CELARCLLPQGKSRFDLLYEFVREAADWPLLLVDDSAPLARTLQSETAERLPNRYKFKKF 209 Query: 92 AVHFSGLN-DTIRNSQYGAMKVKDAIVDAFTRKNL---PRPNVDRDAPDIRVNVWLHKET 147 V N + ++ Y + V +AI DA + P P D + + + ++++T Sbjct: 210 IVQIRLSNWKSTKDQNYVSASVSNAIWDALRDSCVGQWPAPAEREDLTAVPLFLDVNEDT 269 Query: 148 ASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTP--------------- 192 A + D+SG LH RGYRD E LAAAI+ +GW Sbjct: 270 AFLYRDMSGVSLHRRGYRDVIDKTKPNEGLAAAILTLAGWNHNVHGFGAANKNDSGKDRV 329 Query: 193 LLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLA 252 LLDP CG+GT+LIEAA++A + APGL R W F W +D W E + A + + L Sbjct: 330 LLDPFCGTGTILIEAALMAYEIAPGLFRPHWPFQTWHDYDPRAWTECRDAAAS--VQALP 387 Query: 253 EYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPP- 311 + G+D + I R + AR AG+ L+ + P+ V++NP Sbjct: 388 VSGARLIGNDMNDGAITRCKRAARAAGVLHLLELSSETSRHYKPPVIP---SLVVTNPSC 444 Query: 312 -----YGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQY 363 Y + L+ L G+++K+Q G ++ + S + L + + D ++ Sbjct: 445 SAPLTYSSLRGEDERLLTLWLGFGQLLKSQCRGADVYVLSENDWLAHAMHMVPDSKW 501 >UniRef50_A9GP63 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GP63_SORC5 Length = 666 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 82/245 (33%), Positives = 126/245 (51%), Gaps = 18/245 (7%) Query: 429 NVAVDRYADWVVVQEY--------APPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLK 480 +V+VD Y + +VV + APP+ + A + + A + + + V+ Sbjct: 309 SVSVDLYGEHLVVSLFGAGEGEPGAPPRDLVLDAAHR----LGAKGVYLKARPKHASVIV 364 Query: 481 TRERQKGKNQYQKLGEKG-EFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKG 539 R++ ++ GE E L V E+ V L D L TG+FLD R RR + ++++G Sbjct: 365 DARREEFAPRHAVRGEDAPEELTVLEHGLPFKVRLGDGLSTGIFLDQRENRRRVRELARG 424 Query: 540 KDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCL 599 LNLF+YTG+ TV A GGAR + TVD+SR + WA NL G AH +++AD Sbjct: 425 ARVLNLFAYTGAFTVAAVAGGARESVTVDVSRGVVAWARDNLAAIGADPAAHVVVEADVF 484 Query: 600 AWLREA---NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSN 656 WL+ A + +FDL+ +DPP+F+ +K+ F D AL R+L GG ++ Sbjct: 485 PWLKAAAQSDRRFDLVVLDPPSFATTKKSR--FSAASDFGALAALAFRVLAPGGRLLACT 542 Query: 657 NKRGF 661 N RG Sbjct: 543 NHRGI 547 >UniRef50_B6GEK4 Putative uncharacterized protein (Fragment) n=2 Tax=Collinsella RepID=B6GEK4_9ACTN Length = 326 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/190 (38%), Positives = 102/190 (53%), Gaps = 3/190 (1%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 + FAS G E L EL LG + + ++G V F G Y++ +WSRLASRI + L Sbjct: 14 HEFFASCPEGFEVALADELRALGLRQVRRLKGRVTFVGPVADAYRACLWSRLASRIFVTL 73 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 +LY AI W + PGAT AV G +D +RNS + A++VKDA+ D Sbjct: 74 ARFDARDADELYENAAAIAWEHVLRPGATLAVAARGTSDELRNSHFSALRVKDAVCDRLA 133 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRD--RAGIAPI-KETLA 178 R RP+VD D PD R+++ + + AS+ LDLSGD L R R+ R G A + + A Sbjct: 134 RVLGERPSVDTDCPDCRLSLTIRDDRASLHLDLSGDPLFKRLPREATRPGAAHVLRPDYA 193 Query: 179 AAIVMRSGWQ 188 A + + WQ Sbjct: 194 ALALAQINWQ 203 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 27/51 (52%), Positives = 36/51 (70%) Query: 193 LLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEA 243 L+D C G + +EAA + RAPG+ R RWGF GWA+HDEA W E++A+A Sbjct: 275 LIDLCCAGGGITLEAASVLAGRAPGIDRERWGFFGWAEHDEAAWAELRADA 325 >UniRef50_B5Y5B8 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y5B8_PHATR Length = 547 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 113/366 (30%), Positives = 165/366 (45%), Gaps = 55/366 (15%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQ----GGVHFKGDTRLVYQSLMWSRLASR 56 + S A+ GL + L EL LG CQ V+ V F +T+ ++L+W+R + + Sbjct: 58 IGSYIATCIPGLSDALSDELRTLG---CQDVERSASSAVRFNANTQTALKALLWTRTSHK 114 Query: 57 IMLPLGEC----KVYSDLDLYLGVQAINWTEMFNPG---------ATFAVHFSGLNDTIR 103 +M L E K DL ++ + A+ E+ G + S + I Sbjct: 115 VMEFLCESPPTLKSREDLHRFI-LDAVPVKELLGDGRGGLLTLSVGVILNNPSKIPKDIN 173 Query: 104 NSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWL----HKETASIALDLSGDGL 159 +S Y A+ VK+A+ DA RPNVD D PD+ + L S+ L L Sbjct: 174 HSHYSALTVKNALCDAVRELRDDRPNVDLDDPDVPLTAVLLGTDSGARVSLYRQLHNGSL 233 Query: 160 HLRGYRDRA-GIAPIKETLAAAIVMRSGWQP----------GTPLLDPMCGSGTLLIEAA 208 H RGYR A A +KE+LAA +++ +GW LLDPM GSG+LL+E A Sbjct: 234 HKRGYRSGAIHKAAMKESLAAGLLLTAGWDQKCRDARREDDAVVLLDPMAGSGSLLLEGA 293 Query: 209 MLATDRAPGLHRGRWGFSGWA-------QHDEAI-----WQEVKAEAQTRARKGLAEYSS 256 M+A D APGL R + G G + +HD + W+ + +A +RA+ GL S Sbjct: 294 MMAVDLAPGLMRIKCGLPGHSMPPVVRWKHDGDMRVVDEWKALLLDATSRAKSGLRWMQS 353 Query: 257 ----HFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK--GPYGTVLSNP 310 G+D + AG+ L+ E D + P PK G V+SNP Sbjct: 354 TDTVEILGNDIHDGALNLFENALDAAGLRRLVQLEEGDCSDW-KPKPKREGTPFIVVSNP 412 Query: 311 PYGERL 316 P+G RL Sbjct: 413 PWGVRL 418 >UniRef50_C8PM90 RNA methylase family protein n=2 Tax=Treponema RepID=C8PM90_9SPIO Length = 396 Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 116/405 (28%), Positives = 177/405 (43%), Gaps = 39/405 (9%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTR-----LVYQSLMWSRLAS 55 M A A G E +L EL+ L + G V F T V ++ + R A Sbjct: 1 MLEFLALCAVGAEPILSNELKLLNFKPVNRLPGRVFFTPATADPEVVSVMRANFYLRTAD 60 Query: 56 RIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMK---- 111 R+ L L E + LY V A++W F+ + V + S++ + Sbjct: 61 RMYLVLKEFTADNFDTLYDTVAAVDWQRFFSKDSKITVDKVRTFKSKLASEHAVQRAVHK 120 Query: 112 -VKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGI 170 V ++ A+ LP + + +++ + LDLSG+ LH RGYR G Sbjct: 121 AVCSSLCSAWKMDVLPE-----TGREYTIRIYIEHNRVYLLLDLSGEPLHRRGYRLSGGA 175 Query: 171 APIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQ 230 AP++ETLAA ++ W+ PL D CGSGT+ IEA A + PG+ R + F +A Sbjct: 176 APMRETLAAVLLQCMQWKRKLPLHDAFCGSGTIPIEAVWYAYNIPPGIGRS-FAFETFAC 234 Query: 231 HDEAIWQEVKAEAQTRARKGL-AEYSSHFYGSDSDARVIQRARTNAR----LAG-----I 280 + +++ E + R + + GSD+D ++ A+TNA LAG I Sbjct: 235 YSSKKDRQLIEEERRRGALNIRTDCLVRVSGSDNDPEAVRLAQTNAERACMLAGKALQRI 294 Query: 281 GE-----LITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKN 335 G+ F D ++L+ P P+ G +LSNPPYG+RL E I L+ + I ++ Sbjct: 295 GKDNRIPRPEFIQADFSELSAPYPE---GVLLSNPPYGDRLGDEQDAIELYEKMTAIPQD 351 Query: 336 QFGGWNLSLFSASPDLLSCLQLRAD---KQYKAKNGPLDCVQKNY 377 F W L + P LRA K+ K+G LD Y Sbjct: 352 -FQNWRLGFITDKPAFADIF-LRAGITLKKRPLKSGNLDTCLYYY 394 >UniRef50_B5IEU1 Putative RNA methylase n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IEU1_9EURY Length = 356 Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 94/343 (27%), Positives = 156/343 (45%), Gaps = 24/343 (6%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 ++T GLE++ E+E GA ++ G V ++G+ L+Y+ ++ RI + L Sbjct: 3 FLSTTVHGLEDIAAREIEKFGARILELKTGKVIYEGNEELIYRLNYGAKRIFRIAVILSM 62 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQ--YGAMKVKDAIVDAFT 121 K+ D VQ + F TFAV T R + + +M V +A+V Sbjct: 63 GKIKELEDTRKFVQEAD----FCINTTFAVR------TKRRGEHDFTSMDV-NAVVGEEI 111 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 K P+ V+ D P++ W+ E +D +G+ LH RGYR API LA+ + Sbjct: 112 LKKCPKAKVNLDNPNLTFLCWVDNENFIFTIDTTGESLHRRGYRIYQHPAPINPVLASLM 171 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + +GW G ++DP CGSGT+ IEA +R P R + F DEA+W +K Sbjct: 172 LKFAGWN-GEKMVDPFCGSGTIPIEAYH-NYNRVPNKFRT-FNFPKLPFFDEALWNGIKE 228 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 E R E Y + + + + NA+ AG + D + + Sbjct: 229 EMDKSERNKRLE----LYCVEKFKKHVNGCKLNAKNAGAR--FSCLQGDAENMHKFVDYA 282 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSL 344 P+ +++NPP+G R+ S+ + L+ + ++ F G L+L Sbjct: 283 PF--IITNPPFGLRIGSKKKIFKLYEEFAKELEEHFSGAILTL 323 >UniRef50_B7IFP0 Methyltransferase n=1 Tax=Thermosipho africanus TCF52B RepID=B7IFP0_THEAB Length = 344 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 101/321 (31%), Positives = 155/321 (48%), Gaps = 35/321 (10%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 L + GLE EL+NLG G ++ +GD + + + ++ R A R+ + L + Sbjct: 3 LMITCTAGLEGATALELKNLGYKIVDSQSGRIYIEGDLKDIPRLNLFLRTAERVYIVLVQ 62 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVD----A 119 +V + +LY + ++NW E F G S +RNS+ A K AIV A Sbjct: 63 DRVETFDELYNVIYSVNWEE-FVDGKVLISDVS-----VRNSKLSA---KGAIVSVCYAA 113 Query: 120 FTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSG-DGLHLRGYRDRAGIAPIKETLA 178 +K L + N + IR+ + + LD +G D L RGYR + AP++ET+A Sbjct: 114 INKKILRKTN---NIYPIRLII--KNNILQVLLDTTGKDALSKRGYRLKTSKAPLRETIA 168 Query: 179 AAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 AA+V+ S W + L+DP CGSGT+LIEAA+ + P R + W+ + W E Sbjct: 169 AALVLLSRWDKKSSLIDPFCGSGTILIEAALYKENVPPSFLR-YFVSEKWSILKDY-WPE 226 Query: 239 VKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 RK + +G D D V++ A+ N + A I +I +E D N L Sbjct: 227 ---------RKKYKVNVDNLFGFDIDKEVLKVAQENEKRANINGII-YENIDF----NNL 272 Query: 299 PKGPYGTVLSNPPYGERLDSE 319 K V++NPPYGERL ++ Sbjct: 273 KKFENCWVVTNPPYGERLKND 293 >UniRef50_A8F4G2 Putative RNA methylase n=1 Tax=Thermotoga lettingae TMO RepID=A8F4G2_THELT Length = 355 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 98/372 (26%), Positives = 174/372 (46%), Gaps = 31/372 (8%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 L + GLE+ EL+ LG G VHF G + + ++ + A R+M+ + + Sbjct: 3 LVVLCSAGLEKAPCIELKKLGFKIKTTTSGHVHFDGHLIDIPKLNLYLKSADRVMINVTD 62 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMK--VKDAIVDAFT 121 + +L+ G + NW E+ + T V + ++ + S GA+ VK AI Sbjct: 63 FPSETFDELFEGTFSANWNELVHKRGTIVVEKVKITNS-KLSAKGAVASIVKKAIYSKIK 121 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSG-DGLHLRGYRDRAGIAPIKETLAAA 180 N P D + +++ S+ LD +G + L RGYR + AP++ET+AAA Sbjct: 122 SDNQP------DGIIYPMYIYIKNNFVSLMLDTTGKNSLSKRGYRMKTSSAPLRETIAAA 175 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +++ SGW PL+DP CGSGT+ IEAA +A ++ + F W +++++K Sbjct: 176 LILISGWDQEVPLIDPFCGSGTIAIEAARIALQMQN--NKRSFSFENW-----PLFKDLK 228 Query: 241 AEA--QTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 Q ++ +A G D + ++Q A NA AG+ + + F D +L P+ Sbjct: 229 PSIVNQHECKRTVA------IGYDKNPDILQVANENAIRAGVKKYVRFHCSDFEKL--PI 280 Query: 299 PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 +++NPP+G R+ A + + L ++ K F L L + DL + + Sbjct: 281 FHEKLH-IVTNPPFGLRMREGNA--SFYRKLSKLRK-IFPDARLCLITPREDLQKMISIE 336 Query: 359 ADKQYKAKNGPL 370 ++++ +N L Sbjct: 337 LQRKFRFQNSGL 348 >UniRef50_Q57880 Putative RNA methyltransferase MJ0438 n=5 Tax=Methanocaldococcus RepID=Y438_METJA Length = 381 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 90/334 (26%), Positives = 157/334 (47%), Gaps = 26/334 (7%) Query: 5 FASTARGLEELLKTELENLGAV--ECQVVQGGVHFKGDTRLVYQSLMWSRLASR--IMLP 60 + + + GLE++ K E+E+ G E + +G + F GD +L+ + SR R I+L Sbjct: 4 YVTLSPGLEKISKNEIESFGGKIKEIRENKGRIFFSGDLKLIPKINYLSRTIERMNILLH 63 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVK------D 114 E + D+Y V I+WTE +FA+ +R ++ + + Sbjct: 64 REEIPNIALDDIYKRVYNIDWTEWIKENQSFAIR------PLRAGEHNFTSIDIGRVAGE 117 Query: 115 AIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGD-GLHLRGYRDRAGIAPI 173 A++ ++ R R V+ D PD+ V V + + + +D +GD L RGYR A + Sbjct: 118 AVIKSYQRDKNIRLKVNLDEPDVIVRVEVIFDELIVGIDTTGDIALDKRGYRVFNHPAHL 177 Query: 174 KETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHR-GRWGFSGWAQHD 232 T+A+++V S W+ LLDPMCGSGT+ IE A++ + PG R ++GF Sbjct: 178 NATIASSLVYLSDWKDDEMLLDPMCGSGTIPIEGALMKRNIPPGKFRENKYGFKFIDIFG 237 Query: 233 EAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVA 292 + ++K E G D + + + A+ NA+ A + + I F D Sbjct: 238 YELLDKIKKEIVENKN------IYKIIGLDKNQKYLDGAKDNAKNAEVLDTIEFICGDAT 291 Query: 293 QLTNPLPKGPYGTVLSNPPYGERLDSEPALIALH 326 +L + +++NPPYG R+ S+ ++ L+ Sbjct: 292 KLHEKFNES--DVIIANPPYGIRIGSKRSVKKLY 323 >UniRef50_A6LJF6 Putative RNA methylase n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LJF6_THEM4 Length = 340 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 92/326 (28%), Positives = 150/326 (46%), Gaps = 53/326 (16%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 ++ + GLE E++N+G + V G ++ KGD + + + R A R+ + L Sbjct: 2 TIVLTCTSGLEAATALEVKNMGYKVLESVSGKIYIKGDLKDIPLLNIHLRSAERVFILLK 61 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + V + + Y + I+W E F G + S +RNS+ A ++ A R Sbjct: 62 KTVVKTFDEFYKAIYEIDW-EDFVHGKVYISDVS-----VRNSKLSAKGAIISVAYAAIR 115 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGD-GLHLRGYRDRAGIAPIKETLAAAI 181 K + + + P V + L + + LD +G+ L RGYR + AP++ET+AA++ Sbjct: 116 KKV-KSESNVKFP---VRIILKNDVLYVLLDTTGEKALSKRGYRLKTSKAPLRETIAASL 171 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRG----RWGFSGWAQHDEAIWQ 237 ++ S W+ T +DP CGSGT+ IEAA++ ++ PG+ R W F W + + Sbjct: 172 ILLSRWKNAT-FIDPFCGSGTIPIEAALIKSNTPPGIFRSFVSENWNFLNWPDRGKRLIN 230 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 YG D D +I+ A+ NA+ GI LI FE Sbjct: 231 -----------------VDEIYGFDLDEEIIKIAKENAKRIGIKGLI-FE---------- 262 Query: 298 LPKGPYGT-------VLSNPPYGERL 316 K +GT +++NPPYGERL Sbjct: 263 --KRLFGTYNMNNVWIVTNPPYGERL 286 >UniRef50_C1E310 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E310_9CHLO Length = 1009 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 105/352 (29%), Positives = 162/352 (46%), Gaps = 60/352 (17%) Query: 1 MNSLFASTARGLEELLKTELEN--LGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIM 58 + +A+ GLE+++ ELE+ +GA + +V GV F+GD R+ Y++ +W R A R++ Sbjct: 479 LGDYYATCHPGLEDVVAKELESELIGASDVRVGASGVSFRGDARVGYRANVWLRCAIRVL 538 Query: 59 LPLGECKVYSDLDLYLGV-------QAINWTEMF--NPGATFAVHFSGLNDT-IRNSQYG 108 L + Y D ++ G A W E+ + G TF+V + T + +++ Sbjct: 539 CELD--RGYIDPNVPGGAAIYDFVRDAAPWHEVIPADDGLTFSVESRVRSCTDVTSTRLA 596 Query: 109 AMKVKDAIVDAFTRKN---LPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYR 165 + + KDAI DA N P P + D+ + + L ++ A + D+SG+ LH RGYR Sbjct: 597 STRAKDAICDALVDVNGWRPPPPQFGHSSADVPLYLSLFRDEAKLYRDMSGESLHRRGYR 656 Query: 166 DRA-GIAPIKETLAAAIVMRSGWQPGT-----------PLLDPMCGSGTLLIEAAMLA-- 211 D A A + E AA ++ +GW L+DPMCGSGTLLIE AM+A Sbjct: 657 DAAIHRAALNEAAAAGVLSLAGWSAACDRARERGLVLPALVDPMCGSGTLLIEGAMMAGR 716 Query: 212 ---------------------TDRAPGLHRGRWGFSGWAQHDEA-----IWQEVKAEAQT 245 D +PG+ R + F W HD + + + A Sbjct: 717 VAPGLIRVDAAGGFGKGGDGGRDPSPGVQRPAFAFERWPDHDPTLLEEVLEEAAEIGAAA 776 Query: 246 RARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 R + G A G+D A + AR A AG+ +I F D A LT+P Sbjct: 777 RKKMGGAPV---IIGNDVHAGALSLARRAAMAAGVDGVIDFVQGDAADLTHP 825 >UniRef50_A8AXZ7 Methyltransferase n=5 Tax=Streptococcus RepID=A8AXZ7_STRGC Length = 387 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 81/295 (27%), Positives = 143/295 (48%), Gaps = 22/295 (7%) Query: 409 WARQEGIECYRLYDADLPEY-NVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATI 467 + + E I YRL++ + + + VD+Y D+ + Y P ++ + Sbjct: 88 YCQAEDITAYRLFNQEGDGFAGLTVDQYGDYALFSWYNPF----VFSLKEEILQAFQEVF 143 Query: 468 SVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLD-H 526 L A K+ K + + + E E V E V L D L TG+FLD H Sbjct: 144 PELMGAYEKIRFKGLDYESA---HVYGAEAPEVFTVLENGVSYQVFLNDGLMTGIFLDQH 200 Query: 527 RIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGL 586 + ++ +++GK LN+FSYT + +V A +GGA TT+VD+++ E +E + + NGL Sbjct: 201 EVRASLIDGLARGKSLLNMFSYTAAFSVAAAMGGASQTTSVDLAKRSRELSEAHFQANGL 260 Query: 587 TGRAHRLIQADCLAWLREANEQ---FDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLK 643 T HR + D + + A +D+I +DPP+F+ +K+ F V +D+ L+K+ Sbjct: 261 TLDNHRFVVMDVFDYFKYAKRHGLSYDVIVLDPPSFARNKKQ--TFSVAKDYHKLIKESL 318 Query: 644 RLLRAGGTIMFSNN-----KRGFRMDLD-GLAKLGLKAQEITQKTLSQDFARNRQ 692 +L G ++ S N + F+ +++ G A G + I + L DF+ N++ Sbjct: 319 EILNPKGVLIASTNASNVTRAKFKKEIEKGFA--GKYHRYIKEYGLPADFSYNKK 371 >UniRef50_A7HLT5 Putative RNA methylase n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HLT5_FERNB Length = 377 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 101/373 (27%), Positives = 161/373 (43%), Gaps = 34/373 (9%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 + A GLE L EL G + F D + + A RI + + Sbjct: 22 TFVAFCTSGLEGALANELRKNNYKITYSSSGRIFFTADLKDTPSINTKLKAADRIAILIS 81 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMK--VKDAIVDAF 120 + + +LY + + P A + + ++ + S GA+ VK AI+D Sbjct: 82 QFFAETFDELYDNILKSGVKDYVEPNAKITIEKIKVTNS-KLSATGAIASVVKKAILDNI 140 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGD-GLHLRGYRDRAGIAPIKETLAA 179 N P+ + L +T + LD +G+ GLH RGYR +A API+ET+A Sbjct: 141 KGSN-------ETGPEYPFIIILKDDTVYLLLDTTGNIGLHKRGYRIKASKAPIRETIAT 193 Query: 180 AIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 +++ S W PL DP CGSGT+ IEAA+L P + R ++ W + W+ + Sbjct: 194 GVIILSHWNSEIPLFDPFCGSGTIPIEAAIL---EVPNISR-KYVSENWKILKKE-WEII 248 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTN----ARLAGIGELITFEVKDVAQLT 295 K K + + Y SD D +VI A+ N +L I I F+ D +L Sbjct: 249 KKNNG----KNIKTENKKIYASDVDCQVINIAKENYNRAKKLFNINTNIDFKCTDFRKL- 303 Query: 296 NPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCL 355 P+ P V+SN PYG+R++ + L + +I++ +F L S D Sbjct: 304 -PVFNEP-AYVISNLPYGQRIEVD----ILKEI--KILREKFPKGKFYLIHPSEDFEKYF 355 Query: 356 QLRADKQYKAKNG 368 +A K++K +N Sbjct: 356 G-KATKKFKFQNS 367 >UniRef50_D0LIJ5 Putative RNA methylase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIJ5_HALO1 Length = 398 Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 89/274 (32%), Positives = 133/274 (48%), Gaps = 25/274 (9%) Query: 112 VKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIA 171 VK+A++D + + R VD PDI V+V + +++DL+G L RGYR G A Sbjct: 126 VKNALLDGAEARGI-RLEVDPQHPDIHVSVRQIDDELLVSVDLAGASLSQRGYRADRGAA 184 Query: 172 PIKETLAAAIVMRSGWQPGT-PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQ 230 P++E LAA ++M + P + PLLDPMCG+GT+ IEAA++A G H + + Sbjct: 185 PLREHLAAVLLMLARHDPRSEPLLDPMCGAGTIAIEAALMARAAPLGEHIHTAAYRVLPR 244 Query: 231 HDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIG--------- 281 E + EA A+ + G++ D R + AR NA AG+G Sbjct: 245 FSE------RGEAPPLDAPLFADTRATVLGNELDGRTLDAARHNAHAAGLGGDDACTWLR 298 Query: 282 ----ELITFEVKD-VAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQ 336 L V++ +A++++ P+ P G +L NPPYG RL+ P L L+ LG + Q Sbjct: 299 GDFRRLTRKRVEERIARISDADPQRP-GLILCNPPYGHRLEP-PELHRLYRDLGEWCR-Q 355 Query: 337 FGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPL 370 F GW F + D R + NG L Sbjct: 356 FRGWRAGFFVGNRDFEPTFGGRPRVRKPLNNGSL 389 >UniRef50_Q1Q2N3 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q2N3_9BACT Length = 317 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 76/249 (30%), Positives = 124/249 (49%), Gaps = 24/249 (9%) Query: 418 YRL---YDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAP 474 YRL Y +LPE +D Y + V+VQ + + + ++ +++ + IS P Sbjct: 29 YRLLNSYGDNLPE--ATIDIYDNTVLVQYFKTHE----DRTKKEIYEAVQKLIS-----P 77 Query: 475 NKLVLKTRERQKGKNQYQKLGEKGEFLE---VTEYNAHLWVNLTDYLDTGLFLDHRIARR 531 ++ K ER KG++ +L E + V E + D TGL+LD R R+ Sbjct: 78 ECIIEK--ERLKGRDVVTRLISGKEIPDNYVVIENGIQFCTSFNDGGGTGLYLDQRDNRK 135 Query: 532 MLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAH 591 + ++GK+ LN F YT S +V+A GGA TT +D+S + W++ N LN + H Sbjct: 136 KVQSFARGKEILNCFCYTSSFSVYACAGGAAKTTNIDLSGKAIAWSKNNYVLNQIDVNNH 195 Query: 592 RLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRA 648 I D + + + ++FD+I +DPP+FS SK F V++D L+ +LR Sbjct: 196 DFIAGDVWEYFKIFQKRGKEFDVIILDPPSFSTSKSR--TFTVEKDFPELVGLGLNILRE 253 Query: 649 GGTIMFSNN 657 G ++FS N Sbjct: 254 NGILVFSTN 262 >UniRef50_B1ICH9 Methyltransferase n=65 Tax=Streptococcaceae RepID=B1ICH9_STRPI Length = 387 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 87/306 (28%), Positives = 148/306 (48%), Gaps = 24/306 (7%) Query: 399 LRKNLKKFEKWARQEGIECYRLYDADLPEYN-VAVDRYADWVVVQEYAPPKTIDAHKARQ 457 RK +K + + + +RL++ + + + VD Y D+ V Y ++ RQ Sbjct: 78 FRKAKEKRNAYYQDDLTTAFRLFNQEGDGFGGLTVDLYGDYAVFSWYNSY----VYQIRQ 133 Query: 458 RLFDIIAATI-SVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTD 516 + + VLG A K+ K + + Q E +F V E V + D Sbjct: 134 TISEAFRQVFPEVLG-AYEKIRFKGFDYESAHVYGQ---EAPDFFTVLENGVLYQVFMND 189 Query: 517 YLDTGLFLD-HRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLE 575 L TG+FLD H + ++ ++ GK LN+FSYT + +V A +GGA TT+VD+++ E Sbjct: 190 GLMTGIFLDQHEVRGSLVDGLAMGKSLLNMFSYTAAFSVAAAMGGASQTTSVDLAKRSRE 249 Query: 576 WAERNLRLNGLTGRAHRLIQADCLAWLREANEQ---FDLIFIDPPTFSNSKRMEDAFDVQ 632 ++ + + NGL+ HR I D + + A + +D+I +DPP+F+ +K+ F V Sbjct: 250 LSQAHFQANGLSTDEHRFIVMDVFEYFKYAKRKDLTYDVIVLDPPSFARNKKQ--TFSVA 307 Query: 633 RDHLALMKDLKRLLRAGGTIMFSNN-----KRGFRMDLD-GLAKLGLKAQEITQKTLSQD 686 +D+ L+ +L GG I+ S N ++ F +D G A G Q + + L D Sbjct: 308 KDYHKLISQSLEILNPGGIIIASTNAANVSRQKFTEQIDKGFA--GRSYQILNKYGLPAD 365 Query: 687 FARNRQ 692 FA N++ Sbjct: 366 FAYNKK 371 >UniRef50_A1AUW2 SAM-dependent methyltransferase n=10 Tax=Desulfuromonadales RepID=A1AUW2_PELPD Length = 409 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 79/220 (35%), Positives = 114/220 (51%), Gaps = 18/220 (8%) Query: 416 ECYRLYDAD---LPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGI 472 + +RL +A+ LP + VD Y +++VQ Y L +++ GI Sbjct: 100 DAFRLVNAEGDGLP--GLTVDCYGQFLMVQLYCAGWRPHLKTLSGELMELLQPR----GI 153 Query: 473 APNKLVLKTRERQKGKN--QYQKL--GEKG-EFLEVTEYNAHLWVNLTDYLDTGLFLDHR 527 KTRE + ++ +Y +L GE + L+V E V+L L+TGLFLD R Sbjct: 154 YEKSRPQKTRELEAARDDKRYGRLLSGESAPQRLQVRENGLSFLVSLEQGLNTGLFLDQR 213 Query: 528 IARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT 587 RR L +GK LNLF+YTG+ +V A GAR T+VD+S YLEWA N +N L Sbjct: 214 RNRRDLMNRVEGKRVLNLFAYTGAFSVAAASAGAR-VTSVDVSAGYLEWARDNFGINRLN 272 Query: 588 GRAHRLIQADCLA---WLREANEQFDLIFIDPPTFSNSKR 624 + H I DCLA L + + FD+I +DPP+FS + + Sbjct: 273 PKRHEFITGDCLAVLCQLAQKGQGFDVILMDPPSFSTTSK 312 >UniRef50_O28105 Putative RNA methyltransferase AF_2178 n=4 Tax=Archaea RepID=Y2178_ARCFU Length = 392 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 87/338 (25%), Positives = 153/338 (45%), Gaps = 35/338 (10%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQ-----GGVHFKGDTRLVYQSLMWSRLASRIM 58 +A+ GLE++ E+E+ G C+V + G + F G+ + +SR R+ Sbjct: 33 FYATLTPGLEDVAAKEVESFG---CKVEEIRERRGRIFFSGEKSAIPLLNHFSRTLERLN 89 Query: 59 LPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVD 118 + L C+V D+Y V+ ++++ F G +FA+ + + S A A++D Sbjct: 90 VLLLRCEVEGLDDIYAAVKGLDFS--FVKGKSFAIRSLRVGEHDFTSMDIARVAGQAVID 147 Query: 119 AFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGD-GLHLRGYRDRAGIAPIKETL 177 +F R V+ + PD+ + V L + +D +GD +H R +R A + + Sbjct: 148 SFMESYGERLKVNLNQPDVIIRVELVDSELFVGVDTTGDDAMHKRWWRVYNHPAHLNAAI 207 Query: 178 AAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 A ++ + W+ L+DPMCGSGT+ IEAA++ + P L +A W+ Sbjct: 208 ACGMLRIADWKVDESLIDPMCGSGTIPIEAALMVRN-VPNLR-------DFAYKKLCEWE 259 Query: 238 EVKAEAQTRAR-KGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 + R + G+ ++ H G A NA AG+ + I F D ++T Sbjct: 260 LAFEPNEVRLKLYGMEKFRKHLVG----------AIRNAVNAGVADTIEFRQGDATEMT- 308 Query: 297 PLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMK 334 G Y +++NPPYG R+ + A+ L+ R K Sbjct: 309 ----GEYDVIITNPPYGLRIHRKGAIERLYHSFARAAK 342 >UniRef50_A6GJE9 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJE9_9DELT Length = 399 Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 110/390 (28%), Positives = 176/390 (45%), Gaps = 28/390 (7%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 +F + A GLEELL E+E LG E + V GGV GD VY+ + L R+++ +GE Sbjct: 1 MFVAAAPGLEELLLEEVEALGIEEARAVPGGVSCFGDFADVYRLNLGCGLGLRVLIRVGE 60 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 V L + I W + G V + ++ A +V+ I + Sbjct: 61 FFVRDFRKLERVARDIEWERWLDWGMGVRVRAHAKRSRLYHTGGIAERVERGIFARSRGE 120 Query: 124 NLPRPNVDRDAPD-----------IRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAP 172 + + + + P + V V + ++ +I++D +G L RG+R AP Sbjct: 121 AVFCVDGEAEGPGGGDHGPSGFEPVLVQVRIIRDRCTISIDTTGSLLPKRGWRPEGAKAP 180 Query: 173 IKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHD 232 ++E LA A++ S W+PG L+DPM GSGTLLIEAA + P H R+GF G +D Sbjct: 181 LREDLACALLKVSSWRPGVALVDPMVGSGTLLIEAATRSRG-WPANHARRFGFVGAPYYD 239 Query: 233 EAIWQEVKAEAQTRA-RKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDV 291 + EA+ RA G + F G D DA I+ AR NA A +G+ + + Sbjct: 240 SR-----RFEAERRALSAGEDPVAGAFVGFDRDAGAIEIARRNAARAQLGDALELAQGSI 294 Query: 292 AQLTNPLPKGPYGT-----VLSNPPYGERLDSEPALIALHSLLGRI---MKNQFGG--WN 341 L G +++NPP+G R+ L L++ LG+ + + G Sbjct: 295 GSLDGSAVATAVGGAESVLIVANPPWGRRVGDPSRLRNLYASLGQFAARLNDALDGRELG 354 Query: 342 LSLFSASPDLLSCLQLRADKQYKAKNGPLD 371 L++ + P L L +++ K G ++ Sbjct: 355 LAMVTPEPKLAHATGLALERRATVKMGSVE 384 >UniRef50_A9E6J8 Putative uncharacterized protein n=5 Tax=Bacteroidetes RepID=A9E6J8_9FLAO Length = 430 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 83/251 (33%), Positives = 135/251 (53%), Gaps = 26/251 (10%) Query: 386 SKPAMV-AEDYTNRLRKNLKKFEKWARQEGIECYRLY---DADLPEYNVAVDRYADWVVV 441 +KPA + +E +++++R+ K + + YRL + +LP ++ D Y + +VV Sbjct: 105 NKPANINSEWFSDKVREAYNKRIPLLKTD-TNSYRLIYGENDNLP--SLVADVYDNVLVV 161 Query: 442 QEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQY-----QKL-G 495 + YA L DI+ I++ A L L +R QK N++ Q L G Sbjct: 162 KLYASF-------WFYHLKDILPEIINISKAATTVLRL-SRNVQKDTNEFGFYDGQILTG 213 Query: 496 E-KGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATV 554 E + E + E++ + N+ TG FLDHR RR +G++SK K L++FSY G +V Sbjct: 214 ELQSEVIIFKEHSVNFSANVIHGHKTGYFLDHRENRRKVGKLSKNKTVLDVFSYAGGFSV 273 Query: 555 HAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADC---LAWLREANEQFDL 611 HA +GGA T++D+S LE A+ N +LN +G+ H +I D L L +A ++FD+ Sbjct: 274 HALVGGATEVTSLDISAPALEIAKSNAKLNEFSGK-HNIIVGDAFEELNHLAKAKQKFDI 332 Query: 612 IFIDPPTFSNS 622 + IDPP+F+ S Sbjct: 333 VVIDPPSFAKS 343 >UniRef50_D0LV46 Putative RNA methylase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LV46_HALO1 Length = 412 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 55/159 (34%), Positives = 92/159 (57%), Gaps = 5/159 (3%) Query: 501 LEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGG 560 + + E A V++ TG FLD R R ++G+++ G + LNL++YTG +VHA LGG Sbjct: 199 IPIHEGEARFEVDVRAGQKTGFFLDQRRNRMLVGELAAGAEVLNLYAYTGGFSVHAALGG 258 Query: 561 ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANE---QFDLIFIDPP 617 A+ ++VD++R + A N LNGL AH D LA+L + +FDL+ +DPP Sbjct: 259 AQRVSSVDIARPAIASARDNFALNGLDPDAHEFAAEDALAFLERVQQRGRRFDLVIVDPP 318 Query: 618 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSN 656 +F+ S+R + R + + + R++ AGGT++ ++ Sbjct: 319 SFAPSERAKP--KALRAYGKVNELALRVVAAGGTLVSAS 355 >UniRef50_Q2LSE2 SAM-dependent methyltransferase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSE2_SYNAS Length = 401 Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 24/204 (11%) Query: 432 VDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQY 491 VDRY D +V T K R + D + S GI ER +G+ + Sbjct: 122 VDRYDDVLVCS----IATAGMEKNRTAVLDALTGVCSPRGIY---------ERSEGRARR 168 Query: 492 -----QKLG------EKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGK 540 ++ G E+G+ + V E + V++ TG FLD R R+ + +S+G Sbjct: 169 LEGLEERSGWIYGSCEEGKRIPVRENGLYFEVDIVGGQKTGFFLDQRSNRKGVAGLSRGM 228 Query: 541 DFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA 600 LN FSY+G+ +V+A GGA +VD+S + A +L+ NG + H +I+AD + Sbjct: 229 TLLNCFSYSGAFSVYAARGGAERVVSVDVSEGANDMARFHLKKNGFSTERHPVIRADVFS 288 Query: 601 WLREANEQFDLIFIDPPTFSNSKR 624 WLRE E FD I +DPP F+ S++ Sbjct: 289 WLRETEEVFDGIILDPPAFAKSRK 312 >UniRef50_Q1D252 Putative uncharacterized protein n=3 Tax=Cystobacterineae RepID=Q1D252_MYXXD Length = 328 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/230 (30%), Positives = 102/230 (44%), Gaps = 21/230 (9%) Query: 468 SVLGIAPNKLVLKTRERQKG----------KNQYQKLGEKGEFLEVTEYNAHLWVNLTDY 517 +V AP L LK R R+ + GE E E + Sbjct: 73 AVAAWAPRSLYLKRRPREARVLANVAKESLAPEAPARGEAVESFTALENGLTFLIRPAQG 132 Query: 518 LDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWA 577 L GL+LD R R L ++G LNLFSYT + V A GGA+ +D SR LEW Sbjct: 133 LSVGLYLDMRDTRAWLLSQARGLTVLNLFSYTCAFGVVAMAGGAKRALNLDASRRVLEWG 192 Query: 578 ERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAFDVQRD 634 E N RLNG T + + D WL+ + E FD++ DPP+FS ++ F RD Sbjct: 193 EENARLNGQTVDRYDYVAGDVFDWLKRLAKKGESFDIVISDPPSFSTTR--SGRFSAARD 250 Query: 635 HLALMKDLKRLLRAGGTIMFSNNKRGF------RMDLDGLAKLGLKAQEI 678 + L + R++ GG ++ N G M L+G+++ G + + + Sbjct: 251 YARLAEAAARVVSPGGQLVACCNHAGLAARRFEAMVLEGVSQAGRQGKSL 300 >UniRef50_C4FU68 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FU68_9FIRM Length = 396 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 65/196 (33%), Positives = 99/196 (50%), Gaps = 11/196 (5%) Query: 503 VTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGAR 562 + E H ++L TGLFLD R R + Q + GK LNLFSYTG +V A +GGA Sbjct: 185 IRENGIHYAIHLGQEWMTGLFLDQRQVRDYVMQGAAGKKILNLFSYTGGFSVAAAMGGAS 244 Query: 563 STTTVDMSRTYLEWAERNLRLNGLTG--RAHRLIQADCLAWLREANEQ---FDLIFIDPP 617 T +VD++ L + N LNG+ +AH + D ++R A + FD + DPP Sbjct: 245 QTVSVDVANRSLAKTQENFALNGIEAPSQAHEIRVMDVFDYIRYAKRKGLTFDQVVCDPP 304 Query: 618 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD---LDGLAKLGLK 674 +F+ +K+ F +D+ L DL L+ GG ++ S N + ++ D LA Sbjct: 305 SFARTKKY--TFSALKDYGRLAADLWCLVAPGGQLVLSTNHSAYSLEDFKADCLAACP-D 361 Query: 675 AQEITQKTLSQDFARN 690 A+ + L +DF R+ Sbjct: 362 AELLAHFGLGEDFPRS 377 >UniRef50_C9RL63 SAM-dependent methyltransferase-like protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RL63_FIBSS Length = 323 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 76/253 (30%), Positives = 115/253 (45%), Gaps = 35/253 (13%) Query: 430 VAVDRYADWVVVQEYAP---PKTIDAHKARQRLFDII--------AATISVLGIAPNKLV 478 + +D++ D +Q + P + +A LF+ + +++ L AP +V Sbjct: 39 LTIDKFGDRYQMQFFGPELLTSKTEIVEALAALFNPVCVVSKERLSSSGKSLENAPMDVV 98 Query: 479 LKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIAR-----RML 533 + TRE G V E NA V+L D ++ GLFLD R R R Sbjct: 99 IGTREDAVGT--------------VREGNAQFHVDLLDTINPGLFLDMRHVRLEVEERFR 144 Query: 534 GQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRL 593 + FLNLFSYT S +VHA LGGA T D+S L+ N LNGL R Sbjct: 145 AMSGESLRFLNLFSYTCSFSVHARLGGAAVATNADISGKILDKGRENYALNGLDLRPGEF 204 Query: 594 IQADCLA---WLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGG 650 + + + W ++ +FD I +DPP+F+ K F+V+ + L+ D +L +GG Sbjct: 205 FRGNAIEYVHWAQKKGLRFDGIVLDPPSFARFKGFN--FNVREHLMPLVADCATILNSGG 262 Query: 651 TIMFSNNKRGFRM 663 M S+N F + Sbjct: 263 FFMVSSNYSEFNL 275 >UniRef50_Q3ITL0 Putative uncharacterized protein n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3ITL0_NATPD Length = 360 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/214 (34%), Positives = 107/214 (50%), Gaps = 2/214 (0%) Query: 4 LFASTARGLEELLKTELENL-GAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 L A+T GLE + EL L GA + +G V F+G VY+ +R RIM L Sbjct: 3 LLATTNGGLESVAAAELRELTGAEATRHHRGVVAFEGTVEDVYELHYRARSLHRIMAVLV 62 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + V D+Y + + P ATF V + S A +V A++DA+ Sbjct: 63 DTPVAGLDDIYATTADMPVADRL-PEATFGVVGTRHGTHEFTSMDVADRVGQAVIDAYRE 121 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 R VD D P +R+ +L+ E ++A+DL+G+ LH R YR AP++ TLA ++ Sbjct: 122 ATGTRLPVDLDDPTVRLEAYLYDERFTLAVDLTGESLHRRPYRVCEHDAPLRGTLAYQLL 181 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAP 216 + + L+DPM GS T+ IEAA+ ATD P Sbjct: 182 RLADYSADDRLVDPMAGSATIPIEAALDATDAVP 215 >UniRef50_C2HC77 S-adenosyl-L-methionine-dependent methyltransferase n=37 Tax=Bacilli RepID=C2HC77_ENTFC Length = 392 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 6/166 (3%) Query: 496 EKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQ-MSKGKDFLNLFSYTGSATV 554 E E L V E V L + L TG+FLD + R L + + GK LN+FSYTG+ +V Sbjct: 170 EAPEPLIVKENGIKFAVYLNEGLMTGIFLDQKEVRGSLAEGFASGKTVLNMFSYTGAFSV 229 Query: 555 HAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQ---FDL 611 A +GGA TT+VD+++ L+ + +NGL ++I D + + A + +D+ Sbjct: 230 AAAMGGAIETTSVDLAKRSLKKTQEQFEVNGLDVDQQKIIVMDVFQYFKYAKRKQFLYDM 289 Query: 612 IFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 657 I +DPP+F+ +K+ F V +D+ L+KD +L G ++ S N Sbjct: 290 IVLDPPSFARNKK--KVFRVAKDYGELVKDSLDILAENGILIASTN 333 >UniRef50_P39587 Putative ribosomal RNA large subunit methyltransferase ywbD n=112 Tax=Bacteria RepID=YWBD_BACSU Length = 396 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 80/273 (29%), Positives = 129/273 (47%), Gaps = 26/273 (9%) Query: 430 VAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGK- 488 V +D Y ++++Q Y+ K I K D++ + + + + + K R G+ Sbjct: 115 VTIDYYDGYLLIQWYS--KGIYTFK------DMLISALDEMDLDYKAIYEKKRFDTAGQY 166 Query: 489 ---NQYQKLGEKGEF-LEVTEYNAHLWVNLTDYLDTGLFLDHRIARRML-GQMSKGKDFL 543 + + K G +GEF + + E V+L + TG+FLD R R+ + + +KGK L Sbjct: 167 VEDDDFVK-GRRGEFPIIIQENGIQYAVDLNEGAMTGIFLDQRHVRKAIRDRYAKGKTVL 225 Query: 544 NLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR 603 N FSYTG+ +V A LGGA TT+VD++ L +N L AH + D + Sbjct: 226 NTFSYTGAFSVAAALGGAEKTTSVDVANRSLAKTIEQFSVNKLDYEAHDIKVMDVFNYFS 285 Query: 604 EANEQ---FDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRG 660 A ++ FDLI +DPP+F+ +K+ F +D+ L+K+ + G I+ S N Sbjct: 286 YAAKKDLRFDLIILDPPSFARTKKR--TFSAAKDYKNLLKETIAITADKGVIVASTNSSA 343 Query: 661 FRM-DLDGLAKLGLKAQE-----ITQKTLSQDF 687 F M G K I + TL +DF Sbjct: 344 FGMKKFKGFIDAAFKETNERYTIIEEFTLPEDF 376 >UniRef50_A7NRA9 SAM-dependent methyltransferase n=7 Tax=Bacteria RepID=A7NRA9_ROSCS Length = 402 Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 55/153 (35%), Positives = 81/153 (52%), Gaps = 5/153 (3%) Query: 503 VTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGAR 562 V E+ V L TGLFLD R RR + ++ G+ LN F+YTG +++A GGAR Sbjct: 188 VVEHGIRFAVALHTAQKTGLFLDQRENRRFVEGLAAGRTVLNCFAYTGGFSLYALRGGAR 247 Query: 563 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE---ANEQFDLIFIDPPTF 619 +VD+ + RNL LN L HR ADC L + A ++FDL+ +DPP+F Sbjct: 248 QVVSVDVGKGLASATARNLALNRLDDGRHRFETADCFELLEQYAAAGQRFDLVILDPPSF 307 Query: 620 SNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTI 652 ++R E + QR ++ L R ++ GG + Sbjct: 308 --ARRKESRYAAQRAYVRLNALGMRCVKPGGLL 338 >UniRef50_Q6MPD1 Putative methyltransferase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPD1_BDEBA Length = 405 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 83/149 (55%), Gaps = 10/149 (6%) Query: 485 QKGKNQYQKLGEKGEFLEVTEYNAHLWV-NLTDYLDTGLFLDHRIARRMLGQMSKGKDFL 543 +KG N L + +FLE N L+ N+ D TG FLD R R+M+ +K K L Sbjct: 180 EKGVNIVGTLAPEVQFLE----NGVLFASNIRDAAKTGFFLDQRDNRKMIQHFAKDKTVL 235 Query: 544 NLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR 603 NLFSYTG ++ A GGA+ T+VD+++ ++ RN +N L H + D A+L Sbjct: 236 NLFSYTGGFSIFAAKGGAKEVTSVDIAKVAIQAVARNFEINDLKT-VHHDVATDAFAYLE 294 Query: 604 EAN---EQFDLIFIDPPTFS-NSKRMEDA 628 + N +++D++ DPP+F+ N K +E A Sbjct: 295 QLNTEKKKYDIVITDPPSFAPNEKSVEQA 323 >UniRef50_D2BML1 SAM-dependent methyltransferase n=5 Tax=Lactobacillales RepID=D2BML1_LACLK Length = 389 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 14/203 (6%) Query: 496 EKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRML-GQMSKGKDFLNLFSYTGSATV 554 E E L V E L + L TG+FLD + R L G +S GK LN+FSYTG+ +V Sbjct: 169 EAAEPLLVMENGVTYATYLNEGLMTGIFLDQKNVRGALAGGLSTGKTLLNMFSYTGAFSV 228 Query: 555 HAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQ---FDL 611 A GG+ TT+VD+++ L+ +NG+ + ++ D + A ++ +D+ Sbjct: 229 AAAFGGSSQTTSVDLAKRSLDKTREQFLVNGIEPESQKIYVMDVFGYFNYAKKKELTYDM 288 Query: 612 IFIDPPTFS-NSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN------KRGFRMD 664 I +DPP+F+ N K+ F V +++ L+K+ +L GT++ S N K+ +M Sbjct: 289 IVLDPPSFARNGKK---TFSVAKNYGELVKEAVEILENNGTLIASTNAANVSDKKFRQMI 345 Query: 665 LDGLAKLGLKAQEITQKTLSQDF 687 + L G+K ++ L DF Sbjct: 346 EEALKNKGVKFTVFQEEKLPADF 368 >UniRef50_Q1N6E7 Predicted SAM-dependent methyltransferase n=1 Tax=Bermanella marisrubri RepID=Q1N6E7_9GAMM Length = 309 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 82/161 (50%), Gaps = 8/161 (4%) Query: 499 EFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGL 558 EF+ VTE N WV L +TGLFLD R+ + + + K LNLF+YT S V A Sbjct: 106 EFV-VTEQNLKYWVTLGRNQNTGLFLDMAHGRKWVRENCQNKSVLNLFAYTCSLGVAAAA 164 Query: 559 GGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQ--FDLIFIDP 616 G AR VDM++ ++ ++N LN +G + D +++ ++ +DL+ DP Sbjct: 165 GSARQVVNVDMAKAAIKRGQQNFALNEFSGAGTAFMAQDVFKMIKKIGQKGPYDLVICDP 224 Query: 617 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 657 P+F AFDV++D+ +K + + G +M N Sbjct: 225 PSFQTK-----AFDVKKDYAKTLKKIAPFIAEKGKLMLCLN 260 >UniRef50_Q2IGQ5 Putative RNA methylase n=4 Tax=Anaeromyxobacter RepID=Q2IGQ5_ANADE Length = 317 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 71/172 (41%), Positives = 100/172 (58%), Gaps = 8/172 (4%) Query: 148 ASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEA 207 A++++D +G L RG+R R G AP++E+LAA I++ GW P LDPMCGSGTL IEA Sbjct: 97 ATVSVDAAGAPLFRRGWRARVGAAPLRESLAAGILLACGWSGDRPFLDPMCGSGTLAIEA 156 Query: 208 AMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 267 A++A RAPGL R + F HD A ++A+ + R R + + SD +A Sbjct: 157 ALIAAGRAPGLGR-TFAFERLPGHDPARTARLRAQLEARVRP----VTVPIHASDRNAGA 211 Query: 268 IQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSE 319 ++ A+ NA AG+ I F +D A++ P GP G NPPYG RLD + Sbjct: 212 LRLAQKNAAAAGMAGAIAFAREDAARVVP--PPGP-GLCAVNPPYGVRLDED 260 >UniRef50_C1SIB7 Predicted SAM-dependent methyltransferase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SIB7_9BACT Length = 398 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 4/123 (3%) Query: 501 LEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGG 560 + TE N + + + TG FLD R R + G++SKG + LN+F+YTG +++A GG Sbjct: 188 ITFTENNIQFYTDPAEGQKTGFFLDQRNNRLIAGKLSKGLNVLNVFAYTGGFSLYAAAGG 247 Query: 561 ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADC---LAWLREANEQFDLIFIDPP 617 A+S ++D+S+ LE N RLNG HRLI D + LR+ E+F ++ +DPP Sbjct: 248 AKSVASLDISKPALEACGDNFRLNGFR-TPHRLICGDAFEEMEKLRKNGEKFGMVIVDPP 306 Query: 618 TFS 620 +F+ Sbjct: 307 SFA 309 >UniRef50_Q6MNN8 Pseudouridine synthase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MNN8_BDEBA Length = 521 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 7/145 (4%) Query: 518 LDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWA 577 L GLFLD R R + ++G+ LNLFSYT +V + L GAR TVD+S+ ++EW+ Sbjct: 328 LSPGLFLDQRENRLWVKNHAEGRSVLNLFSYTSGFSVVSALAGAREVCTVDVSQNFIEWS 387 Query: 578 ERNLRLNGLTGRA--HRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAFDVQ 632 + N +NGL A H DC+ +L+ +F +I DPP+F SK F + Sbjct: 388 KHNFTINGLDPEAENHEFWVQDCILFLKGTIRRKRKFGMIVCDPPSFGRSKN--GVFSIS 445 Query: 633 RDHLALMKDLKRLLRAGGTIMFSNN 657 ++ L+ + L+ G ++F N Sbjct: 446 KNFDELLINCMYCLQKDGLLLFCTN 470 >UniRef50_Q12JE5 Ribosomal RNA large subunit methyltransferase I n=24 Tax=Bacteria RepID=RLMI_SHEDO Length = 397 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 115/248 (46%), Gaps = 13/248 (5%) Query: 383 TPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDAD---LPEYNVAVDRYADWV 439 T D + A+ A+ + R+++ E R++G+ YRL A+ LP + +DRYAD + Sbjct: 68 TFDKEEAIDADFFARRIQRAQAGREDLIREQGLTGYRLIAAESDGLP--GITIDRYADVL 125 Query: 440 VVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGE 499 V Q A K R L + +A I V ++ Q GE Sbjct: 126 VCQLL----NTGAEKWRDTLVEQLALQFPGCAIYERSDVDSRKKEGLAPVQGLLHGELPA 181 Query: 500 FLEVTEYNA-HLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGL 558 + E N + V++ TG +LD R R + + KGK LN F YTG+ ++A Sbjct: 182 MPIIIEENGIKIAVDVVKGHKTGFYLDQRDNRAIAARFVKGKSVLNCFCYTGTFGLYAAK 241 Query: 559 GGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQ---FDLIFID 615 GA S VD+S L+ A N+ +NGL +AD LR+ ++ FD+I +D Sbjct: 242 AGAASIENVDVSALALQTARDNMAINGLDDSHVNYHEADVFKLLRQYRDEGKTFDVIVLD 301 Query: 616 PPTFSNSK 623 PP F+++K Sbjct: 302 PPKFADNK 309 >UniRef50_A6GJS5 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJS5_9DELT Length = 357 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 87/310 (28%), Positives = 135/310 (43%), Gaps = 31/310 (10%) Query: 397 NRLRKNLKKFEKWARQEGIECYRLYDADLPEY-NVAVDRYADWVVVQEYAPPKTIDAHKA 455 +RLR + E++ RL AD + +AVDRY ++++V +YA + +D++ Sbjct: 40 DRLRWAKEHRERYVEDSFSGACRLVHADADGFPGLAVDRYGEFLLVYKYA--QAVDSYL- 96 Query: 456 RQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQK------LGEKG---EFLEVTEY 506 RL ++ AP + L+ R R + L K EF EV E Sbjct: 97 -DRLVPLLEQEF-----APKGIYLQDRTRSVTAEDSSRRPPAALLAGKAAPPEF-EVEED 149 Query: 507 NAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTT 566 V++T + GLFLD R RR+L +SKG+ LNLFS+TG+ + A GGA T Sbjct: 150 GLKFIVDVTAPVSPGLFLDLRAGRRLLEGISKGRRVLNLFSFTGALALRAVRGGATDVTN 209 Query: 567 VDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL---REANEQFDLIFIDPPTFSNSK 623 VD + +NL + + A + D +L R+ FDL+ +DPP FS K Sbjct: 210 VDAAARSHARCRQNLAASEMDPEACEALSGDVFKFLERFRQRERVFDLVVVDPPPFSTVK 269 Query: 624 RMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL------DGLAKLGLKAQE 677 F L + + R++ GG ++ N G + +G G + Sbjct: 270 GT--TFSALEHWNQLAEAVARVVAPGGEVLAVANAAGLTEEEFLGAVGEGCQNAGRSPRV 327 Query: 678 ITQKTLSQDF 687 I + L DF Sbjct: 328 IDECGLPPDF 337 >UniRef50_Q2IKG3 SAM-dependent methyltransferase n=6 Tax=Cystobacterineae RepID=Q2IKG3_ANADE Length = 400 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 71/133 (53%), Gaps = 4/133 (3%) Query: 496 EKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGK-DFLNLFSYTGSATV 554 E E + + E+ + V++ TG FLD R RRM+ +++G+ + LNLF YTG +V Sbjct: 180 EPPERIAIDEHGMKVLVDVRRGQKTGHFLDQRENRRMVRDLARGRAEALNLFGYTGGFSV 239 Query: 555 HAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADC---LAWLREANEQFDL 611 A LGGA TVD+ R + A N R NGL H DC LA + +FDL Sbjct: 240 AAALGGAGHVVTVDVDRDAIALARENFRANGLDAADHAFAAEDCFELLARYKREGRRFDL 299 Query: 612 IFIDPPTFSNSKR 624 + DPP F+ S++ Sbjct: 300 VVCDPPAFAKSQK 312 >UniRef50_A0KKF0 Ribosomal RNA large subunit methyltransferase I n=34 Tax=Bacteria RepID=RLMI_AERHH Length = 397 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 26/255 (10%) Query: 383 TPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDAD---LPEYNVAVDRYADWV 439 T D + + + + RL+ + + +++G+ YRL A+ LP + +DRYAD++ Sbjct: 67 TFDKEETVDLDFFIRRLKYAQESRDGLIKRQGLTGYRLCAAESDGLP--GLTIDRYADFL 124 Query: 440 VVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLV-----LKTRERQKGKNQYQKL 494 V Q + A QR D+I + L P + + R+++ K + + Sbjct: 125 VCQ------ILSAGAEFQR--DLITQALRTL--YPECSIYERSDVAVRKKEGLKERTGVI 174 Query: 495 -GEKGEFLEVTEYNA--HLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGS 551 GE V E N + V++ + TG +LD R R+ + ++GK LN F YTG Sbjct: 175 YGETPTEPVVIEENGGVKILVDIRNGHKTGFYLDQRDNRQAAAKYTEGKRVLNCFCYTGG 234 Query: 552 ATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANE---Q 608 V+A GGA+ VD+S+ L+ A +N LNGL + ++ D LRE E + Sbjct: 235 FGVYALKGGAKEVVNVDLSQNALDIARQNAELNGLDTSNTQFVRHDVFKLLREYREKGDK 294 Query: 609 FDLIFIDPPTFSNSK 623 FD+I +DPP F+ SK Sbjct: 295 FDVIVLDPPKFAESK 309 >UniRef50_Q7MSX4 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MSX4_WOLSU Length = 391 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 73/250 (29%), Positives = 121/250 (48%), Gaps = 21/250 (8%) Query: 386 SKPAMVAEDYTNRLRKNLKKFEKWA-RQEGIECYRLYDADLPEYNVAVDRYADWVVVQEY 444 ++ + E+ RL+K + K E + G +LP + VD YA+ + +Q Sbjct: 68 TQKSFTPEELKKRLQKAILKRESLLLKTNGARLIHSESDELP--GLIVDSYANHLSLQ-- 123 Query: 445 APPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQK-----LGEKGE 499 I+ +R +I ++ L ++P ++ K+ E+ + + GE + Sbjct: 124 -----INT-AGMERFRPLILESLKEL-LSPLSIIDKSDEKSRQLEGLESSNGVIFGEVPQ 176 Query: 500 FLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLG 559 + + E A +NL + TG +LD R R +L +M+KGK L+LF G +HA L Sbjct: 177 EILLQEEGARFGINLLEGQKTGYYLDQRQNRLLLAEMAKGKRVLDLFCNGGGFGIHALLK 236 Query: 560 GARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQA---DCLAWLREANEQFDLIFIDP 616 GA+ +D S E ++NL LN L + R+I A D L LRE E+FDLI +DP Sbjct: 237 GAKEALFIDSSEMACEQVKKNLSLNQLENKG-RIISANVFDELKGLREREEKFDLIILDP 295 Query: 617 PTFSNSKRME 626 P+F+ +K + Sbjct: 296 PSFAKTKEQQ 305 >UniRef50_B2UNS4 Putative uncharacterized protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UNS4_AKKM8 Length = 297 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 7/199 (3%) Query: 505 EYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMS-KGKDFLNLFSYTGSATVHAGLGGARS 563 E ++++ G+FLD R RR + + S G LN F+YTG+ +V+A LGGA+ Sbjct: 98 EQGVRFKIDMSAGYSQGIFLDQRDHRRRVREKSAPGMRVLNTFAYTGAFSVYAALGGAQ- 156 Query: 564 TTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQ---FDLIFIDPPTFS 620 TTT+D+++ L+WA N LNG+ A + D WL Q F I +DPPTFS Sbjct: 157 TTTLDLAQPCLDWARENFMLNGIEPSAQYFCKGDARRWLERFARQGRTFHGIILDPPTFS 216 Query: 621 NSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGF-RMDLDGLAKLGLKAQEIT 679 R + F V+ + L+ + L GG ++ ++N R D + + +T Sbjct: 217 RDDRGK-VFRVESHYGELVALARECLEPGGWMLCTSNCRKLGHEDFRRMVARAVPGFRLT 275 Query: 680 QKTLSQDFARNRQIHNCWL 698 + DF+ + W+ Sbjct: 276 HDPMPPDFSGEDYLKRLWV 294 >UniRef50_Q1J0R3 SAM-dependent methyltransferase containing PUA domain n=4 Tax=Bacteria RepID=Q1J0R3_DEIGD Length = 403 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 78/135 (57%), Gaps = 4/135 (2%) Query: 520 TGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAER 579 TG FLD R RR + +++G+ LN FS++G +++A GGAR ++D+S L A+R Sbjct: 214 TGFFLDQRENRRRVEALARGRRVLNAFSFSGGFSLYASRGGAREVVSLDISAHALASAQR 273 Query: 580 NLRLN-GLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLAL 638 N LN GL R H +QAD WL + + +FDL+ +DPP+ ++R + R + L Sbjct: 274 NFTLNPGLPAR-HETVQADVFRWLSQTDREFDLVILDPPSL--ARREAERAGAMRAYGKL 330 Query: 639 MKDLKRLLRAGGTIM 653 D R L +GG ++ Sbjct: 331 AADGLRRLVSGGVLV 345 >UniRef50_A3J3C9 Putative uncharacterized protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J3C9_9FLAO Length = 388 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 45/120 (37%), Positives = 69/120 (57%), Gaps = 1/120 (0%) Query: 505 EYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARST 564 E N VN + TG FLD R R++LG+ SKGK LN F YTG +++A GA Sbjct: 183 ENNILFSVNWVEGQKTGFFLDQRENRKLLGEFSKGKKVLNTFCYTGGFSIYAMSSGAELV 242 Query: 565 TTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKR 624 T+VD+S+ ++ A N+ LN H+ + D +++E +Q+D+I +DPP F+ S + Sbjct: 243 TSVDISQKAVDLAASNMELN-FPNANHKAVADDVFNFMKEHTQQYDVIILDPPAFAKSIK 301 >UniRef50_B5XY38 Ribosomal RNA large subunit methyltransferase I n=122 Tax=Gammaproteobacteria RepID=RLMI_KLEP3 Length = 400 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 74/243 (30%), Positives = 116/243 (47%), Gaps = 31/243 (12%) Query: 399 LRKNLKKFEKW----ARQEGIECYRLYDAD---LPEYNVAVDRYADWVVVQEYAPPKTID 451 + L++ + W A ++G++ YRL + LP V +DR+ ++ V+Q + Sbjct: 83 FERRLQQAQTWRAWLAERDGLDSYRLIAGESDGLP--GVTIDRFGNFFVLQ------LLS 134 Query: 452 AHKARQRLFDIIAATISVL-GIAPNKLVLKTRERQKGKNQYQKLGEK---GEF----LEV 503 A QR AA IS L + P+ + + K + +L + GE L + Sbjct: 135 AGAEYQR-----AAIISALQNLFPDCAIYDRSDVAVRKKEGLELAQGPVVGELPPALLPI 189 Query: 504 TEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARS 563 TE+ L V++ TG +LD R +R + K LN FSYTG V A +GG R Sbjct: 190 TEHGMKLLVDIQGGHKTGYYLDQRDSRLATRRYVADKRVLNCFSYTGGFAVSALMGGCRQ 249 Query: 564 TTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL---REANEQFDLIFIDPPTFS 620 T+VD S+ L+ A +N+ LNGL ++ D L R+ E+FD+I +DPP F Sbjct: 250 VTSVDTSQEALDVARQNVELNGLDLSKAEFVRDDVFKLLRKYRDQGEKFDVIVMDPPKFV 309 Query: 621 NSK 623 +K Sbjct: 310 ENK 312 >UniRef50_B9XS18 Pseudouridine synthase n=1 Tax=bacterium Ellin514 RepID=B9XS18_9BACT Length = 536 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/242 (28%), Positives = 115/242 (47%), Gaps = 22/242 (9%) Query: 432 VDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQY 491 V+R D+++ Q P + + QRL ++ +A V NK V +T +Q Sbjct: 247 VERLGDFLLSQS-EQPVSAEQKAELQRLMNLYSAR-GVFHKILNKQVRRTNVQQASPQLV 304 Query: 492 QKLGEK-GEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARR------------MLGQMSK 538 LG+ + + E ++ + GLFLD R RR + ++ Sbjct: 305 --LGDAVPDVFTMQENGLRYELSFNEGYSVGLFLDQRDNRRRIVANHIAAGFPLFPNGAE 362 Query: 539 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADC 598 K+ LN F+YT +V A GA+ T++D+S+ YLEW +RN LN + H I D Sbjct: 363 RKEVLNTFAYTCGFSVCAAKVGAK-VTSLDLSKKYLEWGKRNFELNQIDPTQHDFIYGDT 421 Query: 599 LAWLREANEQ---FDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFS 655 W++ ++ +DLI +DPPTFS SK AF ++D+ L+ +L++ G ++ S Sbjct: 422 FDWMKRLGKKGRAYDLIVLDPPTFSQSKE-HGAFQAEKDYGELVSAALPILKSQGVLLAS 480 Query: 656 NN 657 N Sbjct: 481 TN 482 >UniRef50_D0LSU7 Putative RNA methylase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LSU7_HALO1 Length = 417 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 89/331 (26%), Positives = 146/331 (44%), Gaps = 38/331 (11%) Query: 378 HVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDAD---LPEYNVAVDR 434 V PD + + AE R+R+ + + + E RL + + LP + V+R Sbjct: 84 RVFTRNPDQR--VDAELMRARVREAVAVRRRLLDWDAYESMRLINGEADGLP--GIVVER 139 Query: 435 YADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKL 494 Y D++V Q Y P + + ++D + A ++ I E+++ + Q ++ Sbjct: 140 YGDFLVSQIYTPA----LEELSKHIYDALEAELAPAAIY---------EQRRFRPQSGQM 186 Query: 495 GEKGEFL---------EVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNL 545 E + EV E WV++T L TGLF D R RR + SK + LNL Sbjct: 187 PRAAELIRGVVAPVEFEVREGPLKFWVDVTAPLSTGLFADLRDGRRAVADWSKDRRVLNL 246 Query: 546 FSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQAD---CLAWL 602 FSYTG+ +V+A GGA VD++ A +N LNG I D LA Sbjct: 247 FSYTGAISVYAAHGGATEVAAVDVAAKAHARARKNFALNGFDPETPDHIVGDTFKVLARF 306 Query: 603 REANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFR 662 + +FD++ IDPP F + R A+ +D+ L+ +L GG +M +++ R Sbjct: 307 ADRGRRFDMVVIDPPAFGSPSRGGKAWSAVKDYGELVAASLDVLEPGGLLMAASSTRKIG 366 Query: 663 MD------LDGLAKLGLKAQEITQKTLSQDF 687 + DG + + I +++L DF Sbjct: 367 QEEFEDALADGATRAHTDLRIIDRRSLPADF 397 >UniRef50_B2UZQ1 Methyltransferase n=3 Tax=Clostridium botulinum RepID=B2UZQ1_CLOBA Length = 407 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 57/175 (32%), Positives = 93/175 (53%), Gaps = 8/175 (4%) Query: 495 GEKG-EFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRML-GQMSKGKDFLNLFSYTGSA 552 G+K E L V E N + + L D G+FLD + R+ + S GK LN FSYTG+ Sbjct: 175 GQKAPEPLVVKENNVNFAIYLNDGAMVGVFLDQKDVRKSIKNTYSNGKRVLNTFSYTGAF 234 Query: 553 TVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA---NEQF 609 ++ A +GGA TT+VD++ L+ N +N + H +I D + +EA N++F Sbjct: 235 SMAAAMGGA-ITTSVDLAGRSLKKTIENFEINKIDSNNHEIIVEDIFHYFKEAKKDNKKF 293 Query: 610 DLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD 664 D++ +DPP+++ SK ++ F ++ L+K + G I+ S N F M+ Sbjct: 294 DVVILDPPSYATSK--DNTFSAASNYKDLVKSAIDVTEDEGVIVCSTNCSTFNMN 346 >UniRef50_A5IRW8 SAM-dependent methyltransferase-like protein n=66 Tax=Staphylococcaceae RepID=A5IRW8_STAA9 Length = 390 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 73/251 (29%), Positives = 122/251 (48%), Gaps = 18/251 (7%) Query: 413 EGIECYRLYDADLPEYN-VAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLG 471 +G +RL++A+ + +D Y +++Q Y+ +K + + + + Sbjct: 95 DGTNAFRLFNAEGDGVGGLTIDNYDGHLLIQWYSKG----IYKFKYAILEAVRKVFDYKS 150 Query: 472 IAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLW-VNLTDYLDTGLFLDHRIAR 530 I K+ K E G + G+ EF V E N + V+L D L TG+FLD + R Sbjct: 151 IY-EKVRFKDSEYSGGFVE----GDAPEFPIVIEENFTFYNVDLEDGLMTGIFLDQKEVR 205 Query: 531 RML-GQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGR 589 + L GQ +K + LNLFSYTG+ +V A A STT+VD++ E N LN + + Sbjct: 206 KKLRGQYAKERHVLNLFSYTGAFSVIAA-SEASSTTSVDLANRSRSLTEENFGLNAIDPK 264 Query: 590 AHRLIQADCLAWLREA---NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLL 646 + + D + + A +D I IDPP+F+ +K+ F VQ+D+ L+ +L Sbjct: 265 SQYIYVMDTFDFYKYAARHGHSYDTIVIDPPSFARNKKR--TFSVQKDYDKLINGALNIL 322 Query: 647 RAGGTIMFSNN 657 + GT++ N Sbjct: 323 SSEGTLLLCTN 333 >UniRef50_C1ZF95 Predicted SAM-dependent methyltransferase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZF95_PLALI Length = 425 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 51/146 (34%), Positives = 81/146 (55%), Gaps = 4/146 (2%) Query: 482 RERQKGKNQYQKLGEKGEF-LEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGK 540 RER +GK GE E + EY ++ TG FLD R R ++ ++S + Sbjct: 192 RERDRGKEARVIAGELTEAAVPFLEYGLKFTADVLHGQKTGFFLDQRENRALIRKLSYNR 251 Query: 541 DFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA 600 LNLFSYTG ++ AG+GGA+ T+VD++ +E A ++ LN L H I AD Sbjct: 252 RVLNLFSYTGGFSIAAGVGGAQHVTSVDVAEPAIEVARQHWELNELPASQHEAIAADVFD 311 Query: 601 WLREANE---QFDLIFIDPPTFSNSK 623 +L EA + +++++ +DPP+F+ S+ Sbjct: 312 FLAEAKKAGHRWEVMVVDPPSFAPSQ 337 >UniRef50_UPI00017455E0 hypothetical protein VspiD_12680 n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017455E0 Length = 308 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 16/204 (7%) Query: 512 VNLTDYLDTGLFLDHR-----IARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTT 566 ++ T G+FLD R I R+ + LNLF+YT + +V A G T+ Sbjct: 107 ISFTSGYSQGIFLDQRDNRLAIKERLAQTEPGSQRVLNLFAYTCAFSVAAAAG-GGIATS 165 Query: 567 VDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSK 623 VD+S TYL+W +RNL+LNG+ H ++ D WL+ + ++ + +DPPTFS + Sbjct: 166 VDLSPTYLDWGKRNLQLNGMDPAGHYFVKGDAFDWLQAFAKKGRKWQGVILDPPTFSRGQ 225 Query: 624 RMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR---GFRMD---LDGLAKLGLKAQE 677 ++ F V+ D+ L+K ++L GG ++ N R F M+ G+A+ + + Sbjct: 226 -VKKVFRVEEDYAELVKLATQVLEPGGWMLCCANTRKVSSFEMEEQVRSGVAQARRRLNK 284 Query: 678 ITQKTLSQDFARNRQIHNCWLITA 701 ++ DF + + + WL A Sbjct: 285 FQSASMPADFTGDAYLKSFWLDVA 308 >UniRef50_C8NHK6 SAM (And some other nucleotide) binding motif, PUA domain protein n=2 Tax=Granulicatella RepID=C8NHK6_9LACT Length = 397 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 6/166 (3%) Query: 496 EKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQ-MSKGKDFLNLFSYTGSATV 554 E E L V E + + L TG+FLD R R + Q S G+ LN FSYTG+ +V Sbjct: 175 EAPEPLIVLENGVKYATYMNEGLMTGIFLDQREVRETIRQRYSAGRTVLNTFSYTGAFSV 234 Query: 555 HAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQ---FDL 611 A +GGA TT VD++ LE + +NG+ ++ D + + A ++ FD Sbjct: 235 AAAMGGATKTTCVDVANRSLEKTKEQFAVNGIDPETQQIYVMDVFDYFKYALKKQLTFDT 294 Query: 612 IFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 657 + +DPP+F+ +K+ F V +D+ L+ + L+ GT++ S N Sbjct: 295 VVVDPPSFARTKKR--TFSVVKDYGTLVAQITPLVAPKGTLVLSTN 338 >UniRef50_Q7ND71 Glr4365 protein n=1 Tax=Gloeobacter violaceus RepID=Q7ND71_GLOVI Length = 407 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 77/247 (31%), Positives = 121/247 (48%), Gaps = 23/247 (9%) Query: 429 NVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGI-----APNKLVLKTRE 483 + VDRY D+VVVQ A + R+ + + +A S LGI AP + + +E Sbjct: 126 GLTVDRYGDFVVVQLLA----LGLEPWREVIVECLAQLGSPLGIFERSDAPVRRLEGLKE 181 Query: 484 RQKGKNQYQKLGEKGEFL-EVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDF 542 R GE L E+ E +A L V++ TGLFLD R R+ + ++G++ Sbjct: 182 RVGCL-----WGEAPPTLVEIEEGSARLLVDIQQGQKTGLFLDQRFNRQHAARFAEGRNV 236 Query: 543 LNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL 602 LN F YTG+ V L GA S VD++ AE+N +LNG+ G R + A+ L Sbjct: 237 LNAFGYTGAFGVQCALAGASSVLNVDIAEAATAIAEQNAQLNGV-GEQCRALTANAFDVL 295 Query: 603 REANEQ---FDLIFIDPPTFSNSKR-MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 658 RE + + F++I +DPP F+ S+ +E A R + + +LL GG ++ + Sbjct: 296 REFDREGRRFEMIILDPPAFAKSRSVLEGAL---RGYKEINLRAMKLLTPGGILVTCSCS 352 Query: 659 RGFRMDL 665 M++ Sbjct: 353 SHLSMEM 359 >UniRef50_Q6AKZ6 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AKZ6_DESPS Length = 544 Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 14/161 (8%) Query: 512 VNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSR 571 VN+ + GLFLD R +RR + Q+++G+ NLFS+T S + A GGA +VD++ Sbjct: 343 VNINESQHVGLFLDQRDSRRRVWQIAEGRRVANLFSFTCSFSAAALAGGAEVVFSVDLAG 402 Query: 572 TYLEWAERNLRLNGL--TGRAHRLIQADCLAWLREANEQF----------DLIFIDPPTF 619 + L + N LN L +GR + I+ D WL+ ++ DLI DPP F Sbjct: 403 STLARGKGNFALNHLDESGRG-KFIKEDVCKWLQRQERKYARNPEEFTPWDLIICDPPVF 461 Query: 620 SNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRG 660 +++ + + AF V++ L + ++ LL G +F+NN RG Sbjct: 462 ASAGKGQ-AFHVEKQWPELARQIRMLLSVRGVALFANNHRG 501 >UniRef50_B0S9E6 SAM-dependent methyltransferase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0S9E6_LEPBA Length = 393 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 23/215 (10%) Query: 418 YRLYDAD---LPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAP 474 +RL+ ++ +P + VD Y D V+Q P RL + + + G Sbjct: 100 FRLFHSEGDGVP--GIVVDVYDDTAVLQLKTPGAI--------RLKENLVTFLEKFGFVT 149 Query: 475 NKLVLKTRERQKGKNQYQKLGEKGEFLEVT--EYNAHLWVNLTDYLDTGLFLDHRIARRM 532 +L+ RE+ K+ + KG+ E E + T TG FLD R R + Sbjct: 150 ---ILEKREKTDSKHGDEISFYKGDKAETVFKENGIQFISDTTKGQKTGFFLDQRENRSL 206 Query: 533 LGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNG----LTG 588 LG+ +K K LN F+Y+G+ +V+A L GA+ ++D+S+ LE E+NL LNG L Sbjct: 207 LGRYAKNKIILNTFAYSGAFSVYALLNGAKMVHSLDISKQALELCEKNLELNGFSQELLA 266 Query: 589 RAHRLIQADCLAWLREANEQ-FDLIFIDPPTFSNS 622 H+ + DC +L++ + +D I +DPP F+ + Sbjct: 267 VKHKSLVMDCFDYLKKMDSGIYDCIILDPPAFTKN 301 >UniRef50_Q6MCD2 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MCD2_PARUW Length = 390 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 10/216 (4%) Query: 430 VAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKN 489 + +D Y D V+Q + K ID + + + + + I ++ +E Sbjct: 113 LTIDVYQDVFVLQ--SSTKGID--ELKPWIIETLNELFQPRSIFEKSILPSRKEEGLADV 168 Query: 490 QYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYT 549 Q GE+ + E NL TG FLDHR R+ + +S K LN FSYT Sbjct: 169 QKHLSGEEVGDISFFENGLKFTTNLHKSQKTGFFLDHREMRQWIKTLSFNKKVLNAFSYT 228 Query: 550 GSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQF 609 G +V+A GGA+ +VD+S+ + +++ LN L+ R I AD +LRE + Sbjct: 229 GGFSVYAMAGGAKRVDSVDISQEAVNACQKHFVLNELSEFGSRFICADVFNFLREDVLDY 288 Query: 610 DLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRL 645 DL+ +DPP F +K+ +D R + KD+ RL Sbjct: 289 DLVILDPPAF--AKKQKDVIAACRGY----KDINRL 318 >UniRef50_B5F1W3 Ribosomal RNA large subunit methyltransferase I n=98 Tax=Gammaproteobacteria RepID=RLMI_SALA4 Length = 403 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 74/244 (30%), Positives = 115/244 (47%), Gaps = 29/244 (11%) Query: 395 YTNRLRKNLKKFEKW-ARQEGIECYRLYDAD---LPEYNVAVDRYADWVVVQEYAPPKTI 450 +T RLR+ +++ W A+++G++ YRL + LP V +DR+ ++V+Q + Sbjct: 86 FTRRLRQA-QQWRDWLAKKDGLDSYRLIAGESDGLP--GVTIDRFGHFLVLQ------LL 136 Query: 451 DAHKARQRLFDIIAATISVLGIAPNKLVLKTRE----RQKGKNQYQKLGEKGEF----LE 502 A QR AA IS L + R R+K + GE L Sbjct: 137 SAGAEYQR-----AALISALQTCYPDCAIYDRSDVAVRKKEGMALTQGPVTGELPPALLP 191 Query: 503 VTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGAR 562 + E+ L V++ TG +LD R +R + + + LN FSYTG V A +GG R Sbjct: 192 IEEHGMKLLVDIQGGHKTGYYLDQRDSRLATRRYVENQRVLNCFSYTGGFAVSALMGGCR 251 Query: 563 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL---REANEQFDLIFIDPPTF 619 +VD S+ L+ A +N+ LN L ++ D L RE E+FD+I +DPP F Sbjct: 252 QVVSVDTSQDALDIARQNVELNQLDLSKAEFVRDDVFKLLRAYREHGEKFDVIIMDPPKF 311 Query: 620 SNSK 623 +K Sbjct: 312 VENK 315 >UniRef50_UPI00016C4550 methyltransferase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4550 Length = 395 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 98/202 (48%), Gaps = 18/202 (8%) Query: 430 VAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKN 489 + VDRY DW+ VQ A R I++A +L P + L+T E+ GK Sbjct: 116 MVVDRYGDWLTVQ-------FTALGIASRRETIVSALRELLN--PKGIYLRT-EKGVGKL 165 Query: 490 QYQKLGEK---GEF----LEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDF 542 + +L ++ GE L + E VNLT+ TG +LD R R + +++ GK F Sbjct: 166 EGVELHDQLLWGEPPPPDLSILENGMRFLVNLTEGQKTGYYLDQRDNRAAVARLAPGKRF 225 Query: 543 LNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQA-DCLAW 601 L+ F Y+G +HA GA +D S LE A RN LNGL A + + L Sbjct: 226 LDAFCYSGGFGLHAARAGAAEVLCLDGSEPALELARRNAALNGLENVAFERVNVFNHLGT 285 Query: 602 LREANEQFDLIFIDPPTFSNSK 623 L + +FD++ +DPP F+ ++ Sbjct: 286 LATSGRKFDVVVLDPPKFARNR 307 >UniRef50_Q2BMG3 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMG3_9GAMM Length = 301 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 107/233 (45%), Gaps = 20/233 (8%) Query: 429 NVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGK 488 ++ VD + + V + Y P + D + A + P L ++R +G+ Sbjct: 35 HLVVDWFPPYAVARLYKPVEA-----------DWLEALSETIKSVPEVEGLVIQQRSRGQ 83 Query: 489 NQYQKL--GEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLF 546 + Q + G+ + + E V ++GLFLD R RR + Q + GK LNLF Sbjct: 84 DSLQDVVWGDVPDQMNTMELGLFYQVKPQRNQNSGLFLDMREGRRWVMQNAGGKRVLNLF 143 Query: 547 SYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT-GRAHRLIQADCLAWLR-E 604 SYT + +V A GGA VDMSR + + N RLNGL GR L +W R Sbjct: 144 SYTCAFSVAALAGGADHVVNVDMSRGAINTGKENHRLNGLQDGRVKFLAYDLFRSWKRVR 203 Query: 605 ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 657 +DLI IDPP+F +F ++D+ +++ L L AG ++ +N Sbjct: 204 QYGPYDLIVIDPPSFQPG-----SFVAEKDYRRVIRRLNELTEAGSQVLACHN 251 >UniRef50_B8CIJ5 SAM-dependent methyltransferase, putative n=27 Tax=Proteobacteria RepID=B8CIJ5_SHEPW Length = 345 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 76/284 (26%), Positives = 121/284 (42%), Gaps = 42/284 (14%) Query: 402 NLKKFEKWARQEGIECYRLYDADLPEYN-VAVDRYADWVVVQEYAPPKTIDAHKARQRLF 460 N KF A+Q +CYR++ + N + +DRY + ++Q + Q L Sbjct: 23 NRTKFFAAAQQNDTDCYRIFHGTVEGVNGLNIDRYGEAWLIQSF-----------HQSLT 71 Query: 461 DIIAATISVLGIAPNKLVLKTRER-QKGKNQYQKLGEKGEFLEVTEYNAH----LWVNLT 515 + A +S L I +L + +R K +L ++ E + H L+ + Sbjct: 72 EDELAQVSELLIQQAQLPIIYNDRSNKNSRVLNRLSDETEAFATSSQTMHENGILFSSKL 131 Query: 516 DY--LDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTY 573 + D LFLD R+ R + S+ + LNLFSYT A +GGA +D S Sbjct: 132 RHEGQDPLLFLDMRVGREYVKAHSQNRSVLNLFSYTCGIGTAAAVGGASRVVNIDFSSFA 191 Query: 574 LEWAERNLRLNGLTGRAHRLIQADCLAWLRE--------------------ANEQFDLIF 613 L ++N +LN + G +Q+D LR+ A QFDL+F Sbjct: 192 LAAGKKNAQLNHVEGVC-EFVQSDAFPALRQLAGLKVGGRRNQKLPAYPKLAATQFDLVF 250 Query: 614 IDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 657 +DPP ++ S D+ D+ +L K +A GTI+ NN Sbjct: 251 LDPPRYAKSPF--GIVDLINDYQSLFKPALLTTKAKGTIVCCNN 292 >UniRef50_Q11NR8 SAM-dependent methyltransferase n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11NR8_CYTH3 Length = 393 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 2/123 (1%) Query: 503 VTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGAR 562 V E + V+ D TG F+D R R +L SKGK LN F YTG +V+A GGA Sbjct: 185 VKENDVLFEVDFIDGQKTGFFVDQRENRELLRSYSKGKKVLNTFCYTGGFSVYAASGGAE 244 Query: 563 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA-NEQFDLIFIDPPTFSN 621 +VD+S+ + A +N+ LN G H I ADC +L + + +D+I +DPP F+ Sbjct: 245 VVDSVDISKEAVALAGKNMELN-YPGYKHGTIAADCFDFLGDIEKDYYDIIVLDPPAFAK 303 Query: 622 SKR 624 S + Sbjct: 304 SAK 306 >UniRef50_A8VSD5 Oligopeptide/dipeptide ABC transporter, ATPase subunit n=2 Tax=Bacillus RepID=A8VSD5_9BACI Length = 398 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 71/275 (25%), Positives = 125/275 (45%), Gaps = 15/275 (5%) Query: 393 EDYTNRL-RKNLKKFEKWARQEGIECYRLYDADLPEYN-VAVDRYADWVVVQEYAPPKTI 450 +D+ +RL K + + + +R+++ + + V +D Y + V+ Y+ Sbjct: 77 QDFIDRLILKAIGVRQGYYEDASTTAFRVFNGEGDGFGGVIIDYYERYYVIHWYSEG--- 133 Query: 451 DAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEF-LEVTEYNAH 509 A++ +++ D + +GI K K + + + GE+ L V E N Sbjct: 134 -AYQFKEQFVDSLLRNSDAIGIYEKKRFAKAGQYVEDDDFV--TGEQAPSPLVVFENNVS 190 Query: 510 LWVNLTDYLDTGLFLDHRIARR-MLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVD 568 + V+L D G F D R RR +L + +KG+ LN FSYTG +V A LGG+ T VD Sbjct: 191 IAVDLNDGAMVGFFHDQREVRRAILEKHAKGRTVLNTFSYTGVFSVFAALGGSLKTVNVD 250 Query: 569 MSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQ---FDLIFIDPPTFSNSKRM 625 + E +N L H +I D +L+ + F ++ +DPP+F+ +K+ Sbjct: 251 AANRSKEKTAEQFAMNQLDAEDHDIIVDDAFQFLKRTERRGRTFGMVILDPPSFARTKKT 310 Query: 626 EDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRG 660 F ++D+ L+ D + G I+ S N G Sbjct: 311 --TFSAKKDYKKLLLDAIAVTEENGIIVASMNHAG 343 >UniRef50_A8J6H0 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8J6H0_CHLRE Length = 472 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 99/376 (26%), Positives = 156/376 (41%), Gaps = 48/376 (12%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLV--YQSLMWSRLASRIMLP 60 S FA+ GLE+++ EL +LG + + GV F RL Y + + R A R+M Sbjct: 61 SFFATCHPGLEQVVANELLSLGFRGVEPGRAGVSFVA-RRLSDGYAANLHLRAAIRVMAL 119 Query: 61 LGECKVYSDLD--------LY-LGVQAINWTEMFNPGATFAVHFSGLNDT-IRNSQYGAM 110 L E ++ +D LY + +A W ++ GA+F+V + T I +Q Sbjct: 120 LAEGELGADPQAGKRGGQALYDMVYEAAPWHDIIPRGASFSVEPRLWSCTDISTTQLVWS 179 Query: 111 KVKDAIVDAFT--RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRA 168 +VKDA+ D R + P P D+ + V +K+ + D+SG+ LH RGYRD Sbjct: 180 RVKDAVCDNIRQHRSDKPAPPEKGKVADVPLYVTCYKDHIKVYRDMSGESLHRRGYRDVM 239 Query: 169 GIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGW 228 A + E AA +++ SGW+ L + G G +L + R L G W F W Sbjct: 240 HRAALNEAAAAGVLLMSGWR--QALEEAGDGEGLVLADPM-----REAPLAEGAWPFQHW 292 Query: 229 AQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEV 288 +D A W E A+ R R + G D + A AR AG+ ++ + Sbjct: 293 GDYDSAAWTEQVEAARARVRP---PWRGRLVGIDVHEGALGLAERQARKAGVYNMLELSL 349 Query: 289 KDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSAS 348 D Q + L A L + Q G + S+ S + Sbjct: 350 ADCGQGEDAF-----------------------LAAAWKSLDGFLYRQCPGASASVISGN 386 Query: 349 PDLLSCLQLRADKQYK 364 PD L+L+ +++ Sbjct: 387 PDPFKYLKLKPQSKHR 402 >UniRef50_B4CUH2 SAM-dependent methyltransferase-like protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUH2_9BACT Length = 326 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 78/252 (30%), Positives = 115/252 (45%), Gaps = 18/252 (7%) Query: 432 VDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQY 491 V+R+ + V++ + + AR+ L +AA + P ++ K RQ + Sbjct: 54 VERFGEDVLI-------SYKSDAAREELRSGLAAWCNDNKYPPQRVFGKFLPRQNAERIS 106 Query: 492 QKLGEKGEFLEVT----EYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFS 547 L + L +T E + ++ GLF+D R A R L + K LN F+ Sbjct: 107 PVLLDGDATLPLTTVVEENSMRFGLDFGAGYSAGLFIDQR-ANRALVHREEPKRLLNTFA 165 Query: 548 YTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQ---ADCLAWLRE 604 YT S +V A L GA T +VD+S+ L+ N LNGL HR D L L Sbjct: 166 YTCSFSVTAALVGA-ETVSVDLSKKSLDRGRENFALNGLDDSKHRFFADDVLDVLPRLAR 224 Query: 605 ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN-KRGFRM 663 NE+FD+I +DPPTFS + F V++D AL+ L I+ S N R R Sbjct: 225 KNEKFDIIILDPPTFSRGNKGRR-FQVEQDLEALLLAAFELTAPCARILVSTNCTRLNRR 283 Query: 664 DLDGLAKLGLKA 675 L+ +A+ LKA Sbjct: 284 ALESIARFALKA 295 >UniRef50_B3QNQ6 PUA domain containing protein n=12 Tax=Chlorobiaceae RepID=B3QNQ6_CHLP8 Length = 394 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 74/257 (28%), Positives = 126/257 (49%), Gaps = 33/257 (12%) Query: 381 ESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDAD---LPEYNVAVDRYAD 437 E+ PD E + N++R+ LK EK + +RL + LP + +DR+ Sbjct: 69 ETQPDR------EFFRNKIREALKLREKIYPESETNAWRLVHGESDGLP--GLVIDRFDK 120 Query: 438 WVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRE---RQKGKNQYQK- 493 V+Q ++ + II + L P +VL+ +G Y++ Sbjct: 121 AFVLQSFS--------AGMENHLPIITEVLREL-FDPKAIVLRNESPLRELEGLPLYKEM 171 Query: 494 -LGEKGEFLEVTEYNAHLW-VNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGS 551 LG++ + +V + + VN+ + TG FLD R RR + + + D L++++ G Sbjct: 172 LLGDENDAWQVINDDGISYRVNILEGQKTGFFLDQRENRRHIRKYAADADVLDVYTNDGG 231 Query: 552 ATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQAD----CLAWLREANE 607 ++A GARSTT VD+S+ L+ AE+N R+NGL + I AD L LR+ N Sbjct: 232 FALNAMHAGARSTTMVDISQDALQRAEQNARMNGLEKFS---IVADDAFATLGRLRQENR 288 Query: 608 QFDLIFIDPPTFSNSKR 624 +DL+ +DPP+F+ S++ Sbjct: 289 SYDLVILDPPSFTKSRK 305 >UniRef50_B7FV41 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FV41_PHATR Length = 710 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 90/358 (25%), Positives = 152/358 (42%), Gaps = 65/358 (18%) Query: 11 GLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDL 70 GLE +L EL+ LG V + + ++ AS+++L G L Sbjct: 268 GLETVLSQELDALGIAHKIERNCAVLTNANLDTILSCHLYLGSASQVLLQCGTPFTARGL 327 Query: 71 -DLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF--------- 120 +L V+ + W + A V + T ++ + ++D I+D Sbjct: 328 PELQRKVEKLPWKNLIKTDAEVQVK---VQATFKSKLLHSTAIRDRIIDGIKLSLGVLKK 384 Query: 121 -----TRKNL-------------PRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLR 162 + K+L P+ P + + V + ++ ++L S LH R Sbjct: 385 NPESDSSKSLERVPLKVPQESKGPKNEDGSQGPAVALTVRVMRDQVYLSLATSLTPLHQR 444 Query: 163 GYRDRAGIAPIKETLAAAIVMRSGWQPGT------------PLLDPMCGSGTLLIEAAML 210 GYR +G AP++E LA A++ SGW+P + L+DP CGSGT+ IEAA + Sbjct: 445 GYRLESGKAPLREDLAYAMLYNSGWKPPSAARGESDTIAYDALVDPFCGSGTIAIEAACM 504 Query: 211 ATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSH-----FYGSDSDA 265 A PG R G +D A W ++ K L E SS SD +A Sbjct: 505 AAGLPPGRLRS-APLEGTLFYDPAKWSKI-------VMKSLRESSSQTNETKIVCSDRNA 556 Query: 266 RVIQRARTNARLAGIGELITFEVKDVAQLTNP----LPKG--PYGTVLS-NPPYGERL 316 ++ A+ NA+ AGI +++ ++++ A +P KG P +++ N P+G+R+ Sbjct: 557 GAVKIAKANAKRAGIPDML--DIQECAFTKHPWLDVYQKGVKPRSLLIAGNLPFGQRI 612 >UniRef50_A6FZT8 SAM-dependent methyltransferase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZT8_9DELT Length = 426 Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 16/209 (7%) Query: 429 NVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGK 488 V DRYAD V++ + I+ +A + D +A + G++ E+++ + Sbjct: 139 GVVCDRYADHAVLRLDG--EAIEGWRAV--IEDRLAQRLRARGVSAFLRRQGKGEQKRVE 194 Query: 489 NQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARR--------MLGQMSKGK 540 Y +L + + E+ L V+L TG+FLDHR RR ++ Sbjct: 195 PIYGRLPRAP--IVMREHGMDLLVDLVHGQKTGMFLDHRPNRRSVRARVASLVAAGVAAP 252 Query: 541 DFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA 600 +NLF YTG ++ AGLGGA TVD++ L+ A R+ +LN L HR + Sbjct: 253 RVVNLFGYTGGFSIAAGLGGAAEVVTVDVAAPALDLATRSWQLNALEPHRHRAAPVEVER 312 Query: 601 WLREANEQ--FDLIFIDPPTFSNSKRMED 627 WL E E+ FDL+ DPP+F+ K D Sbjct: 313 WLAEQRERAPFDLVIADPPSFAPRKSARD 341 >UniRef50_B2V9T0 Methyltransferase small n=4 Tax=Bacteria RepID=B2V9T0_SULSY Length = 388 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 65/233 (27%), Positives = 112/233 (48%), Gaps = 20/233 (8%) Query: 430 VAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKN 489 + VD Y ++ +Q I+ + + +I+ + I + I P ++ K+ E+ + K Sbjct: 112 LIVDYYDGYLSLQ-------INTYGMERLRENILKSLIDI--IKPKGIIEKSDEKAREKE 162 Query: 490 QYQK-----LGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSK-GKDFL 543 Q GE E + + EY+ V+L + TG +LD R R++ + K G L Sbjct: 163 GLQTEKKVLFGEVLEKILIFEYDVKFLVSLQESQKTGFYLDQRANRKLTSEYVKEGFKVL 222 Query: 544 NLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR 603 +LF G +H G GA VD+S L E N RLN L + + +++ D +L+ Sbjct: 223 DLFCNAGGFGIHGGKKGAEFIKFVDISSFALSQVEENARLNNL--KNYEIVKDDVFDFLK 280 Query: 604 EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTI-MFS 655 + +++DLI +DPP F+ SK + D R L+ + +LL G + +FS Sbjct: 281 KEKDKYDLIILDPPPFAKSKN--EKHDALRGFKYLILNSLKLLNQNGYLAIFS 331 >UniRef50_Q4U8N8 Methylase, putative n=1 Tax=Theileria annulata RepID=Q4U8N8_THEAN Length = 540 Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 76/326 (23%), Positives = 141/326 (43%), Gaps = 49/326 (15%) Query: 10 RGLEELLKTELENLGAVECQVVQGGVHFKGDT---RLVYQSLMWSRLASRIMLPLGECKV 66 RGLE L EL++ G Q+++ ++ + +Y +SRLAS I +G+ + Sbjct: 17 RGLEHNLFNELQSFGFDRDQLIKANSKITVNSCNLKQLYFLSYFSRLASSIYFEVGKLPL 76 Query: 67 YSDLDLYLGVQAINWTEMFNPGATFAVHFSGL--NDTIRNSQYGAMKVKDAIVDAFTRK- 123 + L+ Q+I W++ ++ ++ L N I++ +Y VKD I + F+ Sbjct: 77 FEKGALFNSCQSITWSDFLGSNNSYMINCDSLITNSYIKSKKYACQLVKDGINNHFSNNL 136 Query: 124 NLPRPNVDRDAPDIRVNVWLHKET-ASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 NL P V+ P++++ + + K+ A++ +D SG + RGYR + I I T+A +I+ Sbjct: 137 NLEPPRVNFSQPEVKLEIDVDKDCIATLLVDSSGSRISSRGYRFKPNIGDIDPTMACSIL 196 Query: 183 MRSGW------QPGTPLLDPMC--------------------------------GSGTLL 204 G+ Q P + +C GSG L Sbjct: 197 YDVGYSSFSNPQFSFPEYEQVCNSDGSHKLNKLDTNSLSESESLNRNSIVDLFSGSGVFL 256 Query: 205 IEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAE----YSSHFYG 260 IE+A+ + PG R R+ F + D ++ +K ++ +E F G Sbjct: 257 IESALYSARIPPGYFRRRFSFQNFPVFDNESFEILKKYTDSKRIPTTSEEWKSLKGKFIG 316 Query: 261 SDSDARVIQRARTNARLAGIGELITF 286 + D + + ++ AGI +L++F Sbjct: 317 IERDWEKLDASLRSSEKAGILDLMSF 342 >UniRef50_C6XXB0 PUA domain containing protein n=4 Tax=Sphingobacteriaceae RepID=C6XXB0_PEDHD Length = 394 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 13/161 (8%) Query: 499 EFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGL 558 EF+EV E +N+ D +G + D R R++L ++GK L+ F Y+G T+++ Sbjct: 179 EFIEVKENGILYHINIADGQKSGFYCDQRDNRKILADYTRGKSVLDCFCYSGGFTLNSLK 238 Query: 559 GGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADC---LAWLREANEQFDLIFID 615 GA S T+VD S +E + NL LNG G IQ+D L ++ + FD++ +D Sbjct: 239 SGAASVTSVDSSALAIETLQHNLELNGFKGSNQHSIQSDVNKQLRIFKDEGKTFDVLVLD 298 Query: 616 PPTFSNSKRMEDAFDVQRDHLALMKDLKR----LLRAGGTI 652 PP ++ S+ D R + KDL R LL+ GG + Sbjct: 299 PPKYAPSRSALDR--AARAY----KDLNRLGMLLLKKGGIL 333 >UniRef50_A5K8W7 Putative uncharacterized protein n=1 Tax=Plasmodium vivax RepID=A5K8W7_PLAVI Length = 480 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 10/207 (4%) Query: 417 CYRLYDAD---LPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIA 473 CYRL + + LP + +DRY D+V +Q + A + L +++ ++L Sbjct: 188 CYRLINGEGDNLP--GLIIDRYHDYVAIQHLTLGMELLAATINEALLEVLNPK-AILFRN 244 Query: 474 PNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRML 533 NK L R + K + KL E+ + +TE + ++++ + +TG F + R R++L Sbjct: 245 DNKERLNERLQIYKKIAHGKLPEQ---VMLTENDCFFFIDMINSPNTGWFHNRRHLRQLL 301 Query: 534 GQMSKGKDFLNLFSYTGSATVH-AGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHR 592 + K L+LFSY GS + A G A+ V+ + + A+++ LN LT Sbjct: 302 SDYAYDKKILDLFSYVGSFGIQCAKKGKAKKVLCVEKDSKFTQLAKKSAYLNNLTSSDIE 361 Query: 593 LIQADCLAWLREANEQFDLIFIDPPTF 619 + +D +A+L E FD+I +DPP Sbjct: 362 FVCSDAIAFLENCKELFDIIILDPPNL 388 >UniRef50_B5YLZ7 Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B5YLZ7_THAPS Length = 604 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 72/268 (26%), Positives = 116/268 (43%), Gaps = 54/268 (20%) Query: 93 VHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIAL 152 +H + + +R + + V D N ++ P +R+ V + ++ ++L Sbjct: 308 MHTKAVAERVRQTMGEVLGVDLVEEDTSNTPNDKAKATEQQRPIVRILVRIERDLVQLSL 367 Query: 153 DLSGD----GLHLRGYRDRAGIAPIKETLAAAIVMRSGWQP------------------- 189 D+S +H+RGYR AP++E LA A++M G +P Sbjct: 368 DVSSSCKAIPMHMRGYRLNPHKAPLREDLAFALLMAGGLEPCWDLNPQKALLGGDFERID 427 Query: 190 --------GTPLL---DPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 P+L DP CGSGT+ IE A + PG R G D +W+E Sbjct: 428 EVDTLAISAEPILQLFDPCCGSGTIAIEGAGMLAGYPPGKKRDA-PLQGTKLCDVELWEE 486 Query: 239 VKAEAQTRARKGLAEYSSH----FYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQL 294 +K+ A +A SS+ +D D R I+ + NA+ AG+ +L++F Sbjct: 487 LKSNA-------MAASSSNQNILVTANDVDMRAIEATKANAKRAGVNDLLSFTRGSFQ-- 537 Query: 295 TNPLPKG------PYGTVLSNPPYGERL 316 T+PL K P V++NPPYG+RL Sbjct: 538 THPLFKQSPSNSHPPLYVVTNPPYGKRL 565 >UniRef50_Q1IYC7 SAM dependent methyltransferase n=3 Tax=Deinococcus RepID=Q1IYC7_DEIGD Length = 318 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 12/180 (6%) Query: 518 LDTGLFLDHRIARRML-GQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEW 576 L GLF D R AR + Q G LN F+YT ++A LGGA VD+SR L W Sbjct: 127 LSIGLFPDARPARAWVREQTPAGSRVLNTFAYTCGFGLNATLGGAAVVKNVDLSRKVLAW 186 Query: 577 AERNLRLNGLTGRAHRLIQADCLAWLREANEQ---FDLIFIDPPTFSNSKRMEDAFDVQR 633 + N L+GL H + D WL+ ++ FDL+ +DPP+F+ K + +R Sbjct: 187 GQANYALSGLPAPDHDFLYGDVFEWLKRLAKRGDLFDLVILDPPSFARGK--SGVWRAER 244 Query: 634 DHLALMKDLKRLLRAGGTIMFSNNKRGF------RMDLDGLAKLGLKAQEITQKTLSQDF 687 D+ L+ + GG ++ +N G R+ GL + G + + T+ +D+ Sbjct: 245 DYGRLVALATAVTAPGGKLLTLSNHAGMTNTLFERLIQAGLGEAGRRGRVATRLNAGKDY 304 >UniRef50_C7GB40 Methyltransferase n=13 Tax=Bacteria RepID=C7GB40_9FIRM Length = 403 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 73/266 (27%), Positives = 131/266 (49%), Gaps = 21/266 (7%) Query: 430 VAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKN 489 + VD+Y D +VV+ A + + ++ + ++ ++ GI + ++ ++ K Sbjct: 112 LVVDKYEDVLVVECLA----LGMEQFKETIVSLLKEELAKDGIKVRGVYERSDANERTKE 167 Query: 490 QYQK----LGEKGEF---LEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDF 542 K +GE EF +E+ E V++ + TG FLD + R + ++ KGK Sbjct: 168 GLPKVKGFIGE--EFDTNVEIKENGVRYLVDVVNGQKTGFFLDQKYNRLAMQRICKGKKV 225 Query: 543 LNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAH-RLIQA-DCLA 600 L+ F++ G+ ++AG+ GA T +D+S ++ A N R NGL H R D L Sbjct: 226 LDCFTHMGTFALNAGIAGAADVTGLDISEYAVQQANENARRNGLEDTVHFRCANVLDELP 285 Query: 601 WLREANEQFDLIFIDPPTFSNSKR-MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 659 L ++ EQ+D++ +DPP F+ S++ ++A R+ MK LK L++ GG + + Sbjct: 286 KLAQSGEQYDVVILDPPAFTKSRQATKNAIKGYRE--INMKGLK-LVKDGGYLATCSCSH 342 Query: 660 GFRMDLDGLAKLGLKAQEITQKTLSQ 685 +L LAK +A + K L Q Sbjct: 343 FMTQEL--LAKTVKEAAKAAHKRLRQ 366 >UniRef50_A3DM75 Putative RNA methylase n=1 Tax=Staphylothermus marinus F1 RepID=A3DM75_STAMF Length = 348 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 87/317 (27%), Positives = 133/317 (41%), Gaps = 61/317 (19%) Query: 18 TELENLGAVECQVVQGGVHFKGDTRL-----VYQSLMWSRLASRI--MLPLGECKVYSDL 70 T EN+ VV V F+ RL + L SR+ SR ++ L E Sbjct: 27 TSFENMSGHVYHVVDN-VSFEAIYRLRSINRAFILLFKSRIGSRTNDLIKLRE------- 78 Query: 71 DLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNV 130 +L+ ++ I++ P +FAV L S + V + I+ K +P V Sbjct: 79 ELFSSLETIHY--YITPYTSFAVDTERLGSHEYTSMDISRIVGEIIIKKVEEKTGIKPVV 136 Query: 131 DRDAPDIRVNVWLHKETASIALDLSGD-GLHLRGYRDRAGIAPIKETLAAAIVMRSGWQP 189 + P I V+V++ E + + L+G LH RGYR A +K TLA A++ SG + Sbjct: 137 NLRTPHIIVHVFVKDENFFLGVSLTGSRSLHRRGYRIYDHPAALKPTLAYAMLTLSGTRD 196 Query: 190 GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARK 249 ++DPMCG GT+ IEAA+L H+EA Sbjct: 197 KQVIVDPMCGGGTIPIEAALL--------------------HEEA--------------- 221 Query: 250 GLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSN 309 + YG D + R I+ A+ NA +G+ + F V D +L + ++SN Sbjct: 222 -------YIYGYDRNPRHIRGAKLNAYASGVYGKVVFGVWDARRLHEIFDE-QVDHIVSN 273 Query: 310 PPYGERLDSEPALIALH 326 PPYG R A+ L+ Sbjct: 274 PPYGIRYGDPVAIRKLY 290 >UniRef50_A8DJY9 SAM-dependent methyltransferase n=2 Tax=Bacteria RepID=A8DJY9_9BACT Length = 425 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 11/161 (6%) Query: 501 LEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGG 560 L VTEY V++ TGLFLD R R ++ ++ G+ LN F+YTG +++A G Sbjct: 214 LVVTEYGLRFHVDIKHGQKTGLFLDQREMRALVERLCTGRRVLNGFAYTGGFSLYAHRGR 273 Query: 561 ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREAN-EQFDLIFIDPPTF 619 A+ +VD S + L+ A+ N LNG + ++AD +LR FD I +DPP Sbjct: 274 AQRVVSVDSSGSALKLAQSNHALNGFSVTDDDFVEADMFTYLRRLEAAAFDFIILDPPAL 333 Query: 620 SNSKRMEDAFDVQRDHLALMKDLKRLLRA----GGTIMFSN 656 +++ ED R + KDL RL A GG ++ S+ Sbjct: 334 --ARKREDVLRAGRAY----KDLNRLAIAKVAPGGLVLTSS 368 >UniRef50_B0N335 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N335_9FIRM Length = 400 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 76/275 (27%), Positives = 130/275 (47%), Gaps = 19/275 (6%) Query: 406 FEKWARQEGIECYRLYDADLPEY-NVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIA 464 F K +E + RL + E + VDRY D +V Q + K + +++I+ Sbjct: 92 FRKTVEKENLTNCRLVFGEADELPGLTVDRYNDILVCQ----ISSYGLDKIKDMIYEILL 147 Query: 465 ATIS-----VLGIAP-NKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYL 518 ++ V GI N + ++ +E + Y + + E +L V++ + Sbjct: 148 EVLTEDGQDVKGIYERNDIKVRAKEGLPLEKGYWRNINLPTTTIINENGINLSVDVENGQ 207 Query: 519 DTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAE 578 TG FLD + R +L ++ GK L+ FS+TG ++A G A+ VD+S+T L+ Sbjct: 208 KTGYFLDQKANRVLLRNIAYGKKVLDCFSHTGGFALNAAYGKAKEVVAVDVSQTALDQGY 267 Query: 579 RNLRLNGLTGRAHRLIQADCLAWLREANE-QFDLIFIDPPTFSNSKRMED-AFDVQRDHL 636 N +LN L G ++ D +L + + QFD+I +DPP F+ S+R D A++ + Sbjct: 268 ANAKLNNLQG-CISFVKDDVFDYLDKCKKGQFDIIVLDPPAFTKSRRTVDHAYNGYKK-- 324 Query: 637 ALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKL 671 MK +K L R G I S ++ M+ D K+ Sbjct: 325 INMKAMKLLGRGGYLITCSCSR---FMETDNFEKM 356 >UniRef50_C7N186 SAM-dependent methyltransferase n=13 Tax=Bacteria RepID=C7N186_SLAHD Length = 416 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 70/292 (23%), Positives = 131/292 (44%), Gaps = 26/292 (8%) Query: 415 IECYRLYDADLPEY-NVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIA 473 + C R+ + + + VDR+ D +V Q T + + +F ++A +S G+A Sbjct: 110 VSCCRVVFGEADGFPGLVVDRFNDVLVTQTL----TFGMEQLKPVVFPVLAKVLSEDGVA 165 Query: 474 PNKLV---------LKTRERQKGKNQYQKLGEKGEFL-EVTEYNAHLWVNLTDYLDTGLF 523 + L+T ++ G + G+ E+ E V+ + TG F Sbjct: 166 LRGIYERNDVATRKLETLDQSCGWFDLGGVSAGGDTTTEICENGVRYQVDFENGQKTGFF 225 Query: 524 LDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRL 583 LD + RR + ++ GK L+ F++TGS ++A +GGA VD+S+ ++ A N RL Sbjct: 226 LDQKYNRRAVAALASGKRVLDCFTHTGSFALNAAVGGAEFVNAVDVSQLAIDQARANARL 285 Query: 584 NGLTGRAHRLIQA--DCLAWLREANEQ-FDLIFIDPPTFSNSKRMEDAFDVQRDHLALMK 640 NG R D L + E + +D I +DPP F+ S++ + R + + Sbjct: 286 NGCEDRMAFTCTNVFDLLPQMEEDRDHSYDFIILDPPAFTKSRKTIGS--ASRGYKEINY 343 Query: 641 DLKRLLRAGGTIM------FSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQD 686 +LL GG + F + +R RM ++ G++ +++ ++ + D Sbjct: 344 RAMKLLPRGGYLATASCSHFMDTERFRRMLVEAAHDAGVQLKQVEERQQAPD 395 >UniRef50_Q0ABR6 SAM-dependent methyltransferase n=15 Tax=Gammaproteobacteria RepID=Q0ABR6_ALHEH Length = 403 Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 103/216 (47%), Gaps = 19/216 (8%) Query: 418 YRLYDAD---LPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAP 474 YRL + LP + +DR+ D VVQ T + R I+ A VLG P Sbjct: 105 YRLVHGEADGLP--GLVIDRFGDACVVQV----NTAGMERVRD---SIVTALGRVLGEGP 155 Query: 475 NKLVLKTRERQ-KGKNQYQKLGE--KGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARR 531 L + R+ +G +YQ G + + LEV E V T TG + DHR+ R+ Sbjct: 156 VLLRCDSAVRELEGLTRYQAWGSGPEAQTLEVVENGVRFQVPATTGQKTGWYYDHRMNRQ 215 Query: 532 MLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAH 591 L G+ L++FSY G+ V A + GA VD S L+ N LNG++ + Sbjct: 216 ALRPWVPGRRVLDVFSYMGAWGVQAAVAGAAEVFCVDSSEQALDGVAENAALNGVSDQVA 275 Query: 592 RLIQA---DCLAWLREANEQFDLIFIDPPTFSNSKR 624 +Q D LA LR+ANE+FD++ +DPP F K+ Sbjct: 276 G-VQGDAFDALAELRQANERFDVVVVDPPAFIKRKK 310 >UniRef50_A8F4H7 Putative uncharacterized protein n=1 Tax=Thermotoga lettingae TMO RepID=A8F4H7_THELT Length = 382 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/140 (33%), Positives = 81/140 (57%), Gaps = 6/140 (4%) Query: 520 TGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAER 579 TG FLD R+ R L ++GK +++FSYTG+ +H GA+ +D S+ L+ A++ Sbjct: 186 TGAFLDQRLNARALFPYAEGKKCVDVFSYTGNFALHLLKYGAKHVKLIDYSQRSLQIADQ 245 Query: 580 NLRLNGLTGRAHRLIQADCLAWLREA---NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHL 636 ++LNG GR + LI A+ WL+ EQ+DLI +DPP+F+ + +++ +R H Sbjct: 246 LMKLNGFEGR-YDLICANAFDWLKRETSLTEQYDLIVLDPPSFAKTSSAKES--AERGHK 302 Query: 637 ALMKDLKRLLRAGGTIMFSN 656 + +LL+ G ++ S+ Sbjct: 303 EVNLRAIKLLKKPGLLVSSS 322 >UniRef50_A6Q436 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q436_NITSB Length = 387 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 73/278 (26%), Positives = 134/278 (48%), Gaps = 33/278 (11%) Query: 417 CYRLYDAD---LPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIA 473 YRL ++ LP + VD+Y +++ + + + + LF+I A + + A Sbjct: 94 AYRLIHSEADMLP--GLIVDKYEEYLSIHFVTAGILLFQEEIVKTLFEITAPKGAYI-TA 150 Query: 474 PNKLVLKTRERQKGKNQYQKL-GEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRM 532 P ++ R++G+ ++K+ G E +E+ E V++ + TG +LD R R + Sbjct: 151 P-----ESAMRKEGEEPFEKMIGALPEHIEIEENGIRFVVDIKNSQKTGFYLDQRANRAI 205 Query: 533 LGQMSKGKD-FLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAH 591 + + K K+ L+ FS +G ++A VD+S L A+ N RLNG+ G+ Sbjct: 206 VTKFMKQKERMLDCFSNSGGFGLYAASKKGADVEIVDISSQALALAKSNFRLNGVVGK-- 263 Query: 592 RLIQADCLAWLREANEQ---FDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLK----R 644 ++A+ +LRE ++ FD + +DPP+F+ S+ + L KD+ + Sbjct: 264 -FVEANVFDYLRELRKKKAKFDTVVLDPPSFAKSRHQKGG------ALKGFKDISVNAMK 316 Query: 645 LLRAGGTI-MFSNNKRGFRMDLDGLAKLGLKAQEITQK 681 LL GG + +FS + +D+D L + LKA + K Sbjct: 317 LLDEGGKLALFSCSH---YVDMDDLVHIVLKAAKDNHK 351 >UniRef50_C6NWD6 LSU m5C1962 methyltransferase RlmI n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NWD6_9GAMM Length = 432 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 76/248 (30%), Positives = 108/248 (43%), Gaps = 22/248 (8%) Query: 418 YRLYDAD---LPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAP 474 YRL + LP + VDRY D++V+Q ++ D+I A + L I P Sbjct: 105 YRLVHGEGDGLP--GLVVDRYGDYLVLQT--------GSAGMEQDLDLIVAALVEL-IRP 153 Query: 475 NKLVLK----TRERQKGKNQYQKL-GEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIA 529 ++LK R + + + L G E LEV E ++ TG F DHR Sbjct: 154 LGILLKGSGVARSIEGLPERIEVLAGAVPEHLEVLENGCSFLIDPRQGQKTGWFYDHRRN 213 Query: 530 RRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTG- 588 R L + + G+ L+LFSY G + GA VD S + L E N R NGL+ Sbjct: 214 RHELTKFATGRRVLDLFSYLGGFALPLARAGAVEVLAVDRSASALALLEENARRNGLSQV 273 Query: 589 RAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRA 648 H + L LR+ E FDLI +DPP S++ D D + L RLLR Sbjct: 274 HGHEGEALETLRQLRDRAESFDLILLDPPALIKSRK--DVRDGTAAYARLNDLALRLLRP 331 Query: 649 GGTIMFSN 656 G + ++ Sbjct: 332 DGLLFTAS 339 >UniRef50_O67850 Putative uncharacterized protein n=2 Tax=Aquificaceae RepID=O67850_AQUAE Length = 391 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/236 (27%), Positives = 123/236 (52%), Gaps = 21/236 (8%) Query: 399 LRKNLKKFEKWARQEGIE--CYRLYDAD---LPEYNVAVDRYADWVVVQEYAPPKTIDAH 453 +RK +K+ ++ ++ I YRL ++ LP + VD Y ++ V+ T + Sbjct: 78 IRKRIKQAYEYRKRLYINSNAYRLVHSEGDLLP--GLIVDVYGSYLAVEF----TTYGMN 131 Query: 454 KARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKL--GEKGEFLEVTEYNAHLW 511 + R+ + D + + GI V + +R +G + +++ GE E + + E++ + Sbjct: 132 QFREVILDTLVELLRPKGIYEK--VNEIAKRVEGLDVEERVIYGEVPEEVIIWEHDLKYY 189 Query: 512 VNLTDYLDTGLFLDHRIARRMLGQMSK-GKDFLNLFSYTGSATVHAGLGGARSTTTVDMS 570 +N+ TG FLD R AR+ + + + G L++F +TG ++ GA VD+S Sbjct: 190 INIPQGQKTGFFLDQRNARKFVRNLVEPGDRCLDVFCHTGGFALNMKRAGAGEVIGVDIS 249 Query: 571 RTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREAN---EQFDLIFIDPPTFSNSK 623 L+ AE+N RLNG T + ++A+ +LRE + E+FD+I IDPP+F+ ++ Sbjct: 250 ELALKEAEKNARLNGFTD--IKWVKANAFDYLRELDKKGEKFDVIIIDPPSFAKNR 303 >UniRef50_D2QYD2 Putative uncharacterized protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QYD2_9PLAN Length = 428 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 69/264 (26%), Positives = 119/264 (45%), Gaps = 26/264 (9%) Query: 398 RLRKNLKKFEKWARQEGIECYRLYDAD---LPEYNVAVDRYADWVVVQEYAPPKTIDAHK 454 +LR+++ K + E YR+ A+ LP + VDR+ + + ++ A + Sbjct: 107 QLRRDVLKLD-----EVTNSYRVIHAEADGLP--GLVVDRHGSVLSAEAFSLAMYQRAPE 159 Query: 455 ARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNL 514 +RL ++ ++L +P L + E + G + + E+ V+ Sbjct: 160 ILERLSKLLGTEQTILRTSPASLAQEGFEAEPVIT-----GTMPSRVVIEEFGTRFKVDF 214 Query: 515 TDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHA-GLGGARSTTTVDMSRTY 573 + TG F D R R+ L K K L+L YTG V A LGGA VD+ Sbjct: 215 AEGHKTGFFCDQRENRKQLASFCKDKTVLDLCCYTGGFAVQAKKLGGASEVIGVDLDEEP 274 Query: 574 LEWAERNLRLNGLTGRAHRLIQADCLAWLRE---ANEQFDLIFIDPPTFSNSK-RMEDAF 629 L+ A+ N LN + R +QAD A++R+ + +FD++ +DPP S+ +E+ Sbjct: 275 LKLAKENANLNQVRC---RFVQADAFAYMRDMQSSGRKFDVVVLDPPKLIRSRAEIEEG- 330 Query: 630 DVQRDHLALMKDLKRLLRAGGTIM 653 R H AL + +L+ GG ++ Sbjct: 331 --TRKHFALNRLAMQLVAPGGVML 352 >UniRef50_B3DWI3 SAM-dependent methyltransferase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DWI3_METI4 Length = 399 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 77/269 (28%), Positives = 121/269 (44%), Gaps = 35/269 (13%) Query: 399 LRKNLKKFEKWARQEGIECYRLYDAD---LPEYNVAVDRYADWVVVQEYAPPKTIDAHKA 455 L K K EK + YRL+ ++ LP + +D+YADW VVQ T A + Sbjct: 89 LSKAFKYREKLFSGKDSNAYRLFWSESDGLP--GLIIDKYADWYVVQFL----TSGADRK 142 Query: 456 RQRLFDIIAATISVLGI-----APNKLVLK---TRERQKGKNQYQKLGEKGEFLEVTEYN 507 R + +++ I AP +L+ T+E K + L V Sbjct: 143 RNEILEVLKGITQSTNIILRNDAPVRLLEGLSLTKESLKEDFPCRHL--------VCMEG 194 Query: 508 AHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTV 567 + V+L + TGL+LD + + Q++KGK L+ FSY G ++ GGA+ V Sbjct: 195 IPILVDLYNGQKTGLYLDQAANYKFISQIAKGKRVLDCFSYQGLFSIFCARGGAQCCVAV 254 Query: 568 DMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA---NEQFDLIFIDPPTFSNSK- 623 D S ++ + N GL + + WLR+ E+FDLI +DPP+F+ +K Sbjct: 255 DQSAAAIDIGKENASQLGLQ---IEWVCENAFDWLRKKEREKEKFDLIILDPPSFTKTKV 311 Query: 624 RMEDAFDVQRDHLALMKDLKRLLRAGGTI 652 + E AF R + + RLL +GG + Sbjct: 312 QKESAF---RGYHEIHLRALRLLDSGGFL 337 >UniRef50_C9L1Z6 PUA domain protein n=33 Tax=Bacteria RepID=C9L1Z6_9BACE Length = 330 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 8/210 (3%) Query: 417 CYRLYDAD---LPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIA 473 YRL + LP + +D YA V+Q ++ +D + L +++ I + Sbjct: 38 TYRLVHGEGDNLP--GLVIDVYAKTAVMQAHSAGMHVDRMVIAEALSEVMGDQIENI-YY 94 Query: 474 PNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRML 533 ++ L + +N + K G + EY V+ TG F+D R R +L Sbjct: 95 KSETTLPFKADLFPENGFLKGGSNDNIAQ--EYGLKFHVDWLKGQKTGFFVDQRENRSLL 152 Query: 534 GQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRL 593 + +KG+ LN+F YTG + +A GGA+ +VD S ++ +N+ LN H Sbjct: 153 ERYAKGRSVLNMFCYTGGFSFYAMRGGAKLVHSVDSSAKAIDLTNKNVELNFPGDLRHEA 212 Query: 594 IQADCLAWLREANEQFDLIFIDPPTFSNSK 623 D +L +Q+DLI +DPP F+ K Sbjct: 213 FAEDAFKYLDRMGDQYDLIILDPPAFAKHK 242 >UniRef50_A9GQV8 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GQV8_SORC5 Length = 421 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 95/200 (47%), Gaps = 16/200 (8%) Query: 501 LEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKD-FLNLFSYTGSATVHAGLG 559 L V E + V+L TG FLD R R + ++ G+ LNLFSY G +V A LG Sbjct: 210 LFVRETGIAMEVDLARGQKTGAFLDQRDNRARVRALAAGRRRVLNLFSYAGGFSVAAALG 269 Query: 560 GARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA---NEQFDLIFIDP 616 GA T+VD + A+R R NG+ AH + AD +L +A +++DLI DP Sbjct: 270 GAGRVTSVDSASAAHASAQRTFRENGVDPAAHEFVTADAFDFLEKARARGDRYDLIICDP 329 Query: 617 PTFSNSKRMED-AFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKA 675 P+F+ S+R + A R L + R+L GG + ++ + D LA L Sbjct: 330 PSFAPSERAKPRALGAYR---RLHAAVARVLDRGGVLCAASCSSHITAE-DFLATL---- 381 Query: 676 QEITQKTLSQDFARNRQIHN 695 TL +D R R IH Sbjct: 382 ---DDATLERDDLRIRAIHG 398 >UniRef50_B3PK12 Predicted SAM-dependent methyltransferase n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PK12_CELJU Length = 307 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 66/230 (28%), Positives = 100/230 (43%), Gaps = 15/230 (6%) Query: 430 VAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKN 489 V +D ++ +++ Y P D D +A+ L LV++ R Q G Sbjct: 35 VTLDYFSPVLLLTLYETPPAPD-------WVDRVASAARPLAPGVQALVVQHR-YQVGAP 86 Query: 490 QYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYT 549 G+ E L V+L + G FLD R+ L Q + K LNLF+YT Sbjct: 87 SQVFWGDLPEPLYARRGRLCFHVHLARQQNAGFFLDMEPGRQWLEQQAINKRVLNLFAYT 146 Query: 550 GSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCL-AWLR-EANE 607 + +V A GA VDMS L N +LN L R + D L +W R + Sbjct: 147 CAFSVVALAAGAEKVVNVDMSSAALNLGRANHQLNNLDKRGAEFLAEDILKSWGRIKRRG 206 Query: 608 QFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 657 FDL+ +DPP++ +F Q+D+ L++ L L+ AGG ++ N Sbjct: 207 PFDLVILDPPSYQKG-----SFIAQKDYAKLVRRLPELMPAGGLVLACLN 251 >UniRef50_B5EPR2 Methyltransferase small n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EPR2_ACIF5 Length = 407 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 82/274 (29%), Positives = 121/274 (44%), Gaps = 34/274 (12%) Query: 395 YTNRLRKNLKKFEKWARQEGIECYRLYDAD---LPEYNVAVDRYADWVVVQEYAPPKTID 451 Y +RL++ L+ E+ G YRL + LP + +DRY D +V+Q Sbjct: 87 YRSRLQQALRMRERLF---GAPFYRLVHGEGDGLP--GLVIDRYEDHLVLQA-------- 133 Query: 452 AHKARQRLFDIIAATISVLGIAPNKLVLKT----RERQKGKNQYQKL-GEKGEFLEVTEY 506 R +I A + L + P ++LK R + +++ + L G E LEV E Sbjct: 134 GSLGMDRDLPLITAALQGL-LRPAGILLKASGAARRLEGLEDRVEVLFGHIPERLEVWEN 192 Query: 507 NAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTT 566 + V+ TG F DHR RR L ++G+ L+ F+Y G + GA + T Sbjct: 193 DCLFQVDPRGGQKTGWFYDHRANRRRLRDFAQGRRVLDCFAYLGGFAIPLAKAGASAVTA 252 Query: 567 VDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW---LREANEQFDLIFIDPPTFSNSK 623 VD S L E N R N + G I D + LR+ EQFDLI +DPP SK Sbjct: 253 VDSSAPALAILEENARRNEVEGLHS--IHGDAMETLHNLRDRGEQFDLIVLDPPALIKSK 310 Query: 624 RMEDAFDVQRDHLALMK--DLKRLLRAGGTIMFS 655 + D + +A + D+ L G I+FS Sbjct: 311 K-----DFKEGSIAYRRFNDMAMRLLTPGGILFS 339 >UniRef50_Q3JX99 Predicted SAM-dependent methyltransferases n=55 Tax=Proteobacteria RepID=Q3JX99_BURP1 Length = 425 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 82/174 (47%), Gaps = 16/174 (9%) Query: 496 EKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVH 555 E G V N H TG ++D R R ++ Q ++ +D LN F YTG ++ Sbjct: 216 ENGVLYHVDVRNGH---------KTGFYVDQRENRALVAQYARDRDVLNCFCYTGGFSLA 266 Query: 556 AGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLI 612 A GGA+ ++D S L A+RN+ NG + + AD LR + E+FDLI Sbjct: 267 ALKGGAKRVVSIDSSGDALALAQRNVAANGFDAARAQWLDADAFKTLRRLVDEGERFDLI 326 Query: 613 FIDPPTFSNSKRMEDAFD-VQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL 665 +DPP F+ ++ D+ D R + + +LLR GG + + MDL Sbjct: 327 VLDPPKFAPTR---DSVDRAARAYKDINLSGLKLLRPGGLLFTYSCSGAIDMDL 377 >UniRef50_C0QT70 Methyltransferase n=2 Tax=Hydrogenothermaceae RepID=C0QT70_PERMH Length = 394 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 59/220 (26%), Positives = 113/220 (51%), Gaps = 19/220 (8%) Query: 461 DIIAATISVLGIAPNKLVLKTRERQKGKNQYQK-----LGEKGEFLEVTEYNAHLWVNLT 515 +II A I + P +V K+ E+ + K + G+ E + + E ++ L Sbjct: 137 NIIKALIDIF--EPEGIVEKSDEKSREKEGLKTENKVVYGKVPESIVIHENGVKFYIQLE 194 Query: 516 DYLDTGLFLDHRIARRMLGQ-MSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYL 574 TG +LD RI R ++ + + +G L+LFS G ++AG+ GA+ T VD+S+ + Sbjct: 195 KGQKTGFYLDQRINRFIVSEYIKEGDSVLDLFSNAGGFGIYAGIKGAKDITFVDISKNAV 254 Query: 575 EWAERNLRLNGLTGRAHRLIQADCLAWLREA---NEQFDLIFIDPPTFS-NSKRMEDAFD 630 ++N LNG+ G + + + + +L ++ ++++DLI +DPP+F+ N ++DA Sbjct: 255 SLIDKNCELNGIKG--YTVYRENVFKFLTDSGSMDKRYDLIILDPPSFAKNRYEVKDA-- 310 Query: 631 VQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAK 670 ++ + + L+ L G +FS + + + LD L K Sbjct: 311 IRGFKFLISRSLEILNDGGFLAVFSCS---YHVSLDDLKK 347 >UniRef50_B7G017 Predicted protein n=2 Tax=Bacillariophyta RepID=B7G017_PHATR Length = 839 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 22/236 (9%) Query: 432 VDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGI-----APNKLVLKTRERQK 486 VDRY W++VQ D + R L I + LGI +P++ + + Sbjct: 563 VDRYDKWLLVQH-------DPKEPRGPLPSIHDG--NTLGIYYIESSPDRSSMGASTNAR 613 Query: 487 GKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQ-MSKGKDFLNL 545 + K EF + E VNL L TG+FLD R R L + LN Sbjct: 614 ARLLEGKPAP--EFFPIVENGVKYVVNLDRDLSTGIFLDQRPQRAWLSRNCCVDTQVLNC 671 Query: 546 FSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT-GRAHRLIQADCLAWLR- 603 F++TG+ +V A GA ST ++D+S+ +L+ +L N + H I DC WL Sbjct: 672 FAHTGAFSVAAASTGA-STVSIDLSKKWLDRLSTHLEANDIEFDERHDAIYGDCFDWLSR 730 Query: 604 --EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 657 + E++D++ +DPP+ S R + + ++ D L+ L++ GG + + N Sbjct: 731 LAKRGEKYDIVILDPPSSSVGGRKKKRWSIKNDMDELVALAANLVKKGGLLWTTTN 786 >UniRef50_Q5SIT4 Putative uncharacterized protein TTHA1280 n=2 Tax=Thermus thermophilus RepID=Q5SIT4_THET8 Length = 382 Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 91/276 (32%), Positives = 129/276 (46%), Gaps = 34/276 (12%) Query: 392 AEDYTNRLRKNLK----KFEKWARQEGIECYRLYDAD---LPEYNVAVDRYADWVVVQEY 444 AED L +NL + E RQ+ YRL A+ LP + VD YA VVQ Sbjct: 65 AEDPVAALLENLAQALARREAVLRQDPEGGYRLVHAEGDLLP--GLVVDYYAGHAVVQ-- 120 Query: 445 APPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQK--LGEKGEFLE 502 AH L + A + K +TRE + G Y + LGE E ++ Sbjct: 121 -----ATAHAWEGLLPQVAEALRPHVQSVLAKNDARTRELE-GLPLYVRPLLGEVPERVQ 174 Query: 503 VTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGAR 562 V E V+L TG +LD R R+ + +G+ L++FSY G +H LG R Sbjct: 175 VQEGRVRYLVDLRAGQKTGAYLDQR-ENRLYMERFRGERALDVFSYAGGFALHLALG-FR 232 Query: 563 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQA---DCLAWLREANEQFDLIFIDPPTF 619 VD S L AE N RLNGL R+++A D L L + E+FDL+ +DPP F Sbjct: 233 EVVAVDSSAEALRRAEENARLNGLGNV--RVLEANAFDLLRRLEKEGERFDLVVLDPPAF 290 Query: 620 SNSKRMEDAFDVQRDHLALMK-DLK--RLLRAGGTI 652 + K+ DV+R + A + +L+ +LL+ GG + Sbjct: 291 AKGKK-----DVERAYRAYKEVNLRAIKLLKEGGIL 321 >UniRef50_Q30R89 Putative uncharacterized protein n=2 Tax=Campylobacterales RepID=Q30R89_SULDN Length = 309 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 16/226 (7%) Query: 430 VAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKN 489 +++D + V YA K+ D L + IA++I K ++ R KG Sbjct: 38 LSIDSIDKVLSVAFYA--KSEDEDSVLLMLREFIASSIY-------KTLVVQRRYIKGSI 88 Query: 490 QYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYT 549 +GE E L E +NL ++ F D + R + + SK K LNLFSYT Sbjct: 89 SEVLVGELDENLYAVENGMKFKLNLLSNQNSYYFADMKNGRTFVRENSKDKRVLNLFSYT 148 Query: 550 GSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR--EANE 607 + +V A LGGA S + +DMS+ L + N LN + + + + L + N Sbjct: 149 CAFSVAAKLGGALSVSNIDMSKGSLSIGKANHHLNNIEPKGVSFLPYNILKSFSRIKQNS 208 Query: 608 QFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIM 653 +DLI IDPPTF +F+ +D+ ++K L ++ G ++ Sbjct: 209 PYDLIIIDPPTFQRG-----SFEAGKDYEKIVKKLSQIASDGAMVL 249 >UniRef50_Q3A0J1 Predicted SAM-dependent methyltransferases n=2 Tax=Desulfuromonadales RepID=Q3A0J1_PELCD Length = 305 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 73/242 (30%), Positives = 111/242 (45%), Gaps = 18/242 (7%) Query: 435 YADWVVVQEYAPPKTIDAHKARQR----LFDIIAATISVLGIAPNKLVLKTRERQKGKNQ 490 Y D V+ +Y PP + RQR L ++ + L P ++L+ R G ++ Sbjct: 32 YDDLVI--DYFPP-VVMVVLYRQRSQAWLEELTQLLTAALPDKPAAVLLQERFLLNGPSR 88 Query: 491 YQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTG 550 + G E LE E + L + + G F D + R+++ + + GK LNLF+YT Sbjct: 89 VLQ-GALPESLEALEAGLSFRLRLGEARNVGFFPDMAVGRKLVRERAAGKRVLNLFAYTC 147 Query: 551 SATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQAD---CLAWLREANE 607 S +V A GGAR +DM+R LE N R+N + R + + + LR+ Sbjct: 148 SFSVAALAGGARQVVNLDMNRGALELGRLNHRVNDIDLRQASFLSLEFFRSIGKLRKLGP 207 Query: 608 QFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD-LD 666 FDL+ DPP S K +F +R L++ L L+ GG I+ N D LD Sbjct: 208 -FDLVICDPPA-SQGK----SFTAERHWPKLVRRLPELVAPGGEIVACLNAPDLGPDFLD 261 Query: 667 GL 668 GL Sbjct: 262 GL 263 >UniRef50_Q59047 Putative ribosomal RNA large subunit methyltransferase MJ1653 n=9 Tax=Euryarchaeota RepID=Y1653_METJA Length = 385 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 30/208 (14%) Query: 430 VAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKN 489 + +D+Y D VQ + + +++ D++ T+ LGI E+ G+N Sbjct: 110 LVIDKYNDIATVQIF--------NYGIEKMKDVVVETLLDLGIDS------IYEKSSGRN 155 Query: 490 QYQK---------LGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSK-G 539 + + GEK E + + E A V D TG FLD R R L + K G Sbjct: 156 RKRAGLPEVEGILAGEKTETI-IQEGEAKFKVTF-DGQKTGFFLDQRENRLELEKFIKEG 213 Query: 540 KDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCL 599 L++ YTG +VHA + GA VD+S+ L+ AE N+ LN + + I+ + Sbjct: 214 DRVLDICCYTGGFSVHAAIRGA-EVVGVDLSKKALKLAEENMELNNIPKDRYEFIEGNAF 272 Query: 600 AWLRE---ANEQFDLIFIDPPTFSNSKR 624 + E E+FD++ +DPP F+ SK+ Sbjct: 273 KVMEEFIEDGEKFDVVILDPPAFAQSKK 300 >UniRef50_C9MRP3 Methyltransferase n=7 Tax=Prevotella RepID=C9MRP3_9BACT Length = 410 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 22/217 (10%) Query: 418 YRLYDAD---LPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAP 474 YRL + LP + +D Y V+Q + ++ H R+ I A + V+G Sbjct: 119 YRLVHGEGDNLP--GLVIDVYGTTAVMQAH----SVGMHVCREV---IARALVKVMGDQL 169 Query: 475 NKLVLKTRERQKGKNQYQKLGEKGEFLE-VTEYNAHLWVNLTDYLD------TGLFLDHR 527 + + K+ K LG++ F+ T+ N + L ++D TG F+D R Sbjct: 170 DSIYYKSETTLPFK---ADLGQENGFIYGQTDNNIAIENGLKFHIDWLKGQKTGFFIDQR 226 Query: 528 IARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT 587 R +L ++G+ LN+F YTG +V+A GGA+ +VD S +E +N+ +N Sbjct: 227 ENRSLLEYYAQGRSVLNMFCYTGGFSVYAMRGGAKCVHSVDSSAKAIELTNKNIEINFPD 286 Query: 588 GRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKR 624 + H D +L + ++DLI +DPP F+ ++ Sbjct: 287 DKRHAAFCEDAFKYLDDNEGKYDLIILDPPAFAKHRQ 323 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A4SME4 Ribosomal RNA large subunit methyltransferase L ... 926 0.0 UniRef50_A1S601 Ribosomal RNA large subunit methyltransferase L ... 891 0.0 UniRef50_A1SX09 Ribosomal RNA large subunit methyltransferase L ... 889 0.0 UniRef50_Q0HJZ9 Ribosomal RNA large subunit methyltransferase L ... 878 0.0 UniRef50_A6V328 Ribosomal RNA large subunit methyltransferase L ... 871 0.0 UniRef50_A6VMR3 Ribosomal RNA large subunit methyltransferase L ... 862 0.0 UniRef50_B4RZ48 Ribosomal RNA large subunit methyltransferase L ... 861 0.0 UniRef50_A4XWP8 Ribosomal RNA large subunit methyltransferase L ... 860 0.0 UniRef50_Q3KFC5 Ribosomal RNA large subunit methyltransferase L ... 845 0.0 UniRef50_A6VW36 Ribosomal RNA large subunit methyltransferase L ... 843 0.0 UniRef50_Q60AX5 Ribosomal RNA large subunit methyltransferase L ... 835 0.0 UniRef50_Q47Z09 Ribosomal RNA large subunit methyltransferase L ... 833 0.0 UniRef50_Q1N650 Putative uncharacterized protein n=2 Tax=Oceanos... 830 0.0 UniRef50_C0N217 Putative RNA methylase family UPF0020 n=1 Tax=Me... 828 0.0 UniRef50_Q5X0J6 Ribosomal RNA large subunit methyltransferase L ... 827 0.0 UniRef50_UPI0000E10BA2 23S rRNA m(2)G2445 methyltransferase n=1 ... 822 0.0 UniRef50_Q6AQA5 Ribosomal RNA large subunit methyltransferase L ... 816 0.0 UniRef50_A3JG83 Predicted methyltransferase n=1 Tax=Marinobacter... 816 0.0 UniRef50_Q1YPL5 Putative uncharacterized protein n=1 Tax=gamma p... 814 0.0 UniRef50_C7RA96 Putative RNA methylase n=1 Tax=Kangiella koreens... 812 0.0 UniRef50_A0L8B5 Ribosomal RNA large subunit methyltransferase L ... 812 0.0 UniRef50_Q2SCH1 Ribosomal RNA large subunit methyltransferase L ... 795 0.0 UniRef50_Q31IC8 Ribosomal RNA large subunit methyltransferase L ... 794 0.0 UniRef50_Q21JW7 Ribosomal RNA large subunit methyltransferase L ... 787 0.0 UniRef50_A5EX48 Ribosomal RNA large subunit methyltransferase L ... 786 0.0 UniRef50_A4BHH9 Putative uncharacterized protein n=5 Tax=Proteob... 784 0.0 UniRef50_Q5QX63 Ribosomal RNA large subunit methyltransferase L ... 782 0.0 UniRef50_Q3IGZ3 Ribosomal RNA large subunit methyltransferase L ... 778 0.0 UniRef50_Q1QXV9 Ribosomal RNA large subunit methyltransferase L ... 772 0.0 UniRef50_B0VAL5 Ribosomal RNA large subunit methyltransferase L ... 767 0.0 UniRef50_D2U8T0 Putative rna methylase protein n=1 Tax=Xanthomon... 764 0.0 UniRef50_B0U0U4 Ribosomal RNA large subunit methyltransferase L ... 748 0.0 UniRef50_P57444 Ribosomal RNA large subunit methyltransferase L ... 745 0.0 UniRef50_B9ZLS0 Putative RNA methylase n=1 Tax=Thioalkalivibrio ... 738 0.0 UniRef50_A6GF98 Putative uncharacterized protein n=2 Tax=Proteob... 734 0.0 UniRef50_Q1QCP8 Ribosomal RNA large subunit methyltransferase L ... 720 0.0 UniRef50_A5WGC0 Ribosomal RNA large subunit methyltransferase L ... 698 0.0 UniRef50_B2IA87 Ribosomal RNA large subunit methyltransferase L ... 689 0.0 UniRef50_Q0VQU5 Ribosomal RNA large subunit methyltransferase L ... 672 0.0 UniRef50_C7N0P8 Predicted N6-adenine-specific DNA methylase n=1 ... 660 0.0 UniRef50_B9CL66 Methyltransferase n=1 Tax=Atopobium rimae ATCC 4... 656 0.0 UniRef50_C8WGP0 THUMP domain protein n=1 Tax=Eggerthella lenta D... 641 0.0 UniRef50_D0KZE4 Putative RNA methylase n=1 Tax=Halothiobacillus ... 635 e-180 UniRef50_C8W7K3 THUMP domain protein n=1 Tax=Atopobium parvulum ... 631 e-179 UniRef50_A1ARJ2 Putative RNA methylase n=9 Tax=Desulfuromonadale... 466 e-129 UniRef50_Q55156 Putative RNA methyltransferase slr0064 n=22 Tax=... 465 e-129 UniRef50_C6WWA7 Putative RNA methylase n=2 Tax=Betaproteobacteri... 460 e-128 UniRef50_Q2YA86 Putative RNA methylase n=3 Tax=Betaproteobacteri... 458 e-127 UniRef50_C9Q0K8 THUMP domain/methyltransferase domain protein n=... 454 e-126 UniRef50_B8FHN3 Putative RNA methylase n=1 Tax=Desulfatibacillum... 453 e-126 UniRef50_B5CV55 Putative uncharacterized protein n=1 Tax=Bactero... 445 e-123 UniRef50_Q7NRS5 Probable oxidoreductase n=1 Tax=Chromobacterium ... 440 e-121 UniRef50_UPI0000E87EDF Putative RNA methylase:THUMP n=1 Tax=Meth... 440 e-121 UniRef50_C0DRY4 Putative uncharacterized protein n=1 Tax=Eikenel... 439 e-121 UniRef50_UPI00016C3D60 hypothetical protein GobsU_18040 n=1 Tax=... 438 e-121 UniRef50_A0M2L5 Protein belonging to UPF0020-possibly an RNA met... 438 e-121 UniRef50_B6BTD9 N6-adenine-specific DNA methylase n=1 Tax=beta p... 438 e-121 UniRef50_Q9KC03 BH1771 protein n=3 Tax=Bacillales RepID=Q9KC03_B... 433 e-120 UniRef50_B4RPC6 Tou5 n=34 Tax=Proteobacteria RepID=B4RPC6_NEIG2 430 e-119 UniRef50_A6T245 N6-adenine-specific DNA methylase n=9 Tax=Betapr... 428 e-118 UniRef50_Q2L074 Putative methylase n=4 Tax=Bordetella RepID=Q2L0... 427 e-118 UniRef50_A0Q0L2 Nucleic acid methylase n=6 Tax=Clostridiales Rep... 427 e-118 UniRef50_C2MBZ0 THUMP domain protein n=1 Tax=Porphyromonas uenon... 425 e-117 UniRef50_Q6MPB2 Putative N6-adenine-specific DNA methylase n=1 T... 424 e-117 UniRef50_C0YIG9 Probable methylase n=1 Tax=Chryseobacterium gleu... 424 e-117 UniRef50_Q0K713 Predicted N6-adenine-specific DNA methylase n=11... 424 e-117 UniRef50_A8FEF3 Site-specific DNA-methyltransferase (Adenine-spe... 423 e-117 UniRef50_B7GKR8 Predicted N6-adenine-specific DNA methylase n=8 ... 423 e-116 UniRef50_B0TF24 Thump domain protein n=33 Tax=Firmicutes RepID=B... 422 e-116 UniRef50_Q3SES4 N6-adenine-specific DNA methylase n=2 Tax=Betapr... 421 e-116 UniRef50_P50840 Putative RNA methyltransferase ypsC n=152 Tax=Fi... 421 e-116 UniRef50_C6X0X4 Methyltransferase n=1 Tax=Flavobacteriaceae bact... 421 e-116 UniRef50_Q7P2H5 METHYLTRANSFERASE n=10 Tax=Fusobacterium RepID=Q... 418 e-115 UniRef50_Q898M5 Methyltransferase n=2 Tax=Bacteria RepID=Q898M5_... 418 e-115 UniRef50_B2RJX4 Putative N6-adenine-specific DNA methylase n=2 T... 417 e-115 UniRef50_C4ZFU5 Nucleic acid methylase n=25 Tax=Firmicutes RepID... 416 e-114 UniRef50_Q11Q19 RNA methylase family protein n=1 Tax=Cytophaga h... 415 e-114 UniRef50_B2V4U2 Methyltransferase n=7 Tax=Clostridium RepID=B2V4... 415 e-114 UniRef50_B5JRH4 Putative RNA methylase family UPF0020 n=1 Tax=Ve... 415 e-114 UniRef50_C3WCN4 Methyltransferase n=6 Tax=Fusobacterium RepID=C3... 414 e-114 UniRef50_C9YEX1 Putative uncharacterized protein n=1 Tax=Curviba... 413 e-113 UniRef50_A6NQS7 Putative uncharacterized protein n=1 Tax=Bactero... 413 e-113 UniRef50_Q26FC8 N6-adenine-specific DNA methylase n=20 Tax=Bacte... 411 e-113 UniRef50_Q1DCA8 THUMP domain/methyltransferase domain protein n=... 411 e-113 UniRef50_D1RAW3 Putative uncharacterized protein n=1 Tax=Parachl... 411 e-113 UniRef50_Q311V9 Putative uncharacterized protein n=2 Tax=Desulfo... 410 e-112 UniRef50_A9KSV9 Putative RNA methylase n=26 Tax=Bacteria RepID=A... 406 e-111 UniRef50_Q2LXZ8 Predicted N6-adenine-specific DNA methylase n=3 ... 406 e-111 UniRef50_A6EAV4 Predicted N6-adenine-specific DNA methylase n=5 ... 405 e-111 UniRef50_C3JC56 RNA methylase family protein n=2 Tax=Bacteria Re... 403 e-110 UniRef50_B1CAN9 Putative uncharacterized protein n=1 Tax=Anaerof... 401 e-110 UniRef50_C0QBT1 Putative RNA methylase family protein n=2 Tax=De... 400 e-110 UniRef50_C5WIH5 Methyltransferase n=45 Tax=Firmicutes RepID=C5WI... 400 e-109 UniRef50_C1CIN4 Methyltransferase n=129 Tax=Bacilli RepID=C1CIN4... 398 e-109 UniRef50_A1V086 THUMP domain protein n=52 Tax=Burkholderia RepID... 398 e-109 UniRef50_C5AB46 Predicted N6-adenine-specific DNA methylase n=3 ... 397 e-109 UniRef50_A6DTJ8 Putative uncharacterized protein n=1 Tax=Lentisp... 397 e-109 UniRef50_D2BKU1 RNA methyltransferase n=24 Tax=Lactobacillales R... 392 e-107 UniRef50_A8G252 Putative RNA methylase family UPF0020 n=7 Tax=Pr... 389 e-106 UniRef50_C2KWZ1 Site-specific DNA-methyltransferase (Adenine-spe... 388 e-106 UniRef50_Q6MD72 Putative uncharacterized protein n=1 Tax=Candida... 385 e-105 UniRef50_A8ZTQ6 Putative RNA methylase n=1 Tax=Desulfococcus ole... 384 e-105 UniRef50_A6GTU6 Probable oxidoreductase n=1 Tax=Limnobacter sp. ... 383 e-104 UniRef50_A4XLV3 Putative RNA methylase n=1 Tax=Caldicellulosirup... 382 e-104 UniRef50_B8JAH2 Putative RNA methylase n=5 Tax=Myxococcales RepI... 381 e-104 UniRef50_B0PDR5 Putative uncharacterized protein n=5 Tax=Clostri... 381 e-104 UniRef50_C4FAV8 Putative uncharacterized protein (Fragment) n=2 ... 379 e-103 UniRef50_C7PKB2 Putative RNA methylase n=2 Tax=Sphingobacteriale... 379 e-103 UniRef50_C7I387 Putative RNA methylase n=1 Tax=Thiomonas interme... 375 e-102 UniRef50_B1XYJ5 Putative RNA methylase n=1 Tax=Leptothrix cholod... 374 e-102 UniRef50_C8QZA7 Putative RNA methylase n=1 Tax=Desulfurivibrio a... 373 e-101 UniRef50_B9MKJ8 Putative RNA methylase n=1 Tax=Anaerocellum ther... 369 e-100 UniRef50_Q1NS64 Putative RNA methylase:THUMP n=2 Tax=delta prote... 368 e-100 UniRef50_A5GQS8 Predicted N6-adenine-specific DNA methylase n=21... 366 1e-99 UniRef50_A4SVE4 Putative RNA methylase n=2 Tax=Polynucleobacter ... 366 2e-99 UniRef50_B8LLK7 Putative uncharacterized protein n=1 Tax=Picea s... 364 6e-99 UniRef50_D1VVQ9 Protein YpsC n=1 Tax=Peptoniphilus lacrimalis 31... 363 1e-98 UniRef50_B0S0R6 Methyltransferase n=2 Tax=Finegoldia magna RepID... 362 3e-98 UniRef50_Q1JY11 Putative RNA methylase n=1 Tax=Desulfuromonas ac... 361 7e-98 UniRef50_C7N3A2 Predicted SAM-dependent methyltransferase n=1 Ta... 359 3e-97 UniRef50_Q3A2B2 Predicted N6-adenine-specific DNA methylase n=1 ... 359 3e-97 UniRef50_A4EBB5 Putative uncharacterized protein n=4 Tax=Bacteri... 357 9e-97 UniRef50_B9P9P2 Predicted protein n=14 Tax=cellular organisms Re... 356 1e-96 UniRef50_B8GQ82 Oxidoreductase n=26 Tax=Proteobacteria RepID=B8G... 355 3e-96 UniRef50_B8FK67 Putative RNA methylase n=1 Tax=Desulfatibacillum... 353 1e-95 UniRef50_D1R8Y2 Putative uncharacterized protein n=1 Tax=Parachl... 353 2e-95 UniRef50_Q1DAR2 Putative uncharacterized protein n=2 Tax=Cystoba... 352 2e-95 UniRef50_A8SGD5 Putative uncharacterized protein n=3 Tax=Ruminoc... 350 1e-94 UniRef50_C2BEE4 Site-specific DNA-methyltransferase (Adenine-spe... 348 3e-94 UniRef50_Q6MHD5 Putative uncharacterized protein n=1 Tax=Bdellov... 347 7e-94 UniRef50_A3UEM0 Putative uncharacterized protein n=1 Tax=Oceanic... 346 2e-93 UniRef50_B7QQX4 RNA methylase family protein n=35 Tax=Rhodobacte... 345 4e-93 UniRef50_C7PR68 Methyltransferase type 11 n=1 Tax=Chitinophaga p... 343 1e-92 UniRef50_A4SA02 Predicted protein (Fragment) n=1 Tax=Ostreococcu... 341 5e-92 UniRef50_D0LH66 Oxidoreductase n=1 Tax=Haliangium ochraceum DSM ... 337 7e-91 UniRef50_A0LJ49 Putative RNA methylase n=1 Tax=Syntrophobacter f... 334 1e-89 UniRef50_Q04XY1 SAM-dependent methyltransferase n=4 Tax=Leptospi... 333 1e-89 UniRef50_C0QIM2 Putative N6-adenine-specific DNA methylase n=1 T... 333 2e-89 UniRef50_Q1CZM0 RNA methylase family protein n=2 Tax=Cystobacter... 332 2e-89 UniRef50_B0S9B9 N6-adenine-specific DNA methylase n=2 Tax=Leptos... 332 3e-89 UniRef50_C8PND5 Putative uncharacterized protein n=1 Tax=Trepone... 331 5e-89 UniRef50_Q6MCL8 Putative uncharacterized protein n=1 Tax=Candida... 330 1e-88 UniRef50_Q73LF1 Putative uncharacterized protein n=1 Tax=Trepone... 329 3e-88 UniRef50_C8PM90 RNA methylase family protein n=2 Tax=Treponema R... 327 8e-88 UniRef50_Q0F3C8 Putative uncharacterized protein n=1 Tax=Maripro... 326 2e-87 UniRef50_C1A5B5 Putative uncharacterized protein n=1 Tax=Gemmati... 324 1e-86 UniRef50_B0SEV3 SAM-dependent methyltransferase n=2 Tax=Leptospi... 323 1e-86 UniRef50_C2D7E0 N6-adenine-specific DNA methytransferase n=1 Tax... 323 2e-86 UniRef50_C7HSK3 Methylase n=3 Tax=Anaerococcus RepID=C7HSK3_9FIRM 320 1e-85 UniRef50_Q04TW7 N6-adenine-specific DNA methylase n=4 Tax=Leptos... 314 6e-84 UniRef50_A8ZX82 Putative uncharacterized protein n=2 Tax=Desulfo... 313 1e-83 UniRef50_A3VSE9 Putative uncharacterized protein n=1 Tax=Parvula... 311 7e-83 UniRef50_A8F4G2 Putative RNA methylase n=1 Tax=Thermotoga lettin... 308 5e-82 UniRef50_UPI0001621339 predicted protein n=1 Tax=Physcomitrella ... 297 8e-79 UniRef50_Q57880 Putative RNA methyltransferase MJ0438 n=5 Tax=Me... 294 1e-77 UniRef50_B7IFP0 Methyltransferase n=1 Tax=Thermosipho africanus ... 292 3e-77 UniRef50_A7HLT5 Putative RNA methylase n=1 Tax=Fervidobacterium ... 290 1e-76 UniRef50_A2SC20 N6-adenine-specific DNA methylase-like protein n... 287 1e-75 UniRef50_C1E310 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 286 2e-75 UniRef50_A6LJF6 Putative RNA methylase n=1 Tax=Thermosipho melan... 282 4e-74 UniRef50_D2EHY6 N6-adenine-specific DNA methylase (Fragment) n=6... 279 3e-73 UniRef50_B5Y5B8 Predicted protein n=1 Tax=Phaeodactylum tricornu... 277 7e-73 UniRef50_A6GJE9 Putative uncharacterized protein n=1 Tax=Plesioc... 275 3e-72 UniRef50_O28105 Putative RNA methyltransferase AF_2178 n=4 Tax=A... 272 3e-71 UniRef50_A0KKF0 Ribosomal RNA large subunit methyltransferase I ... 270 1e-70 UniRef50_UPI000169A05C hypothetical protein Epers_10695 n=1 Tax=... 268 6e-70 UniRef50_B5IEU1 Putative RNA methylase n=2 Tax=Aciduliprofundum ... 268 7e-70 UniRef50_B1ICH9 Methyltransferase n=65 Tax=Streptococcaceae RepI... 265 5e-69 UniRef50_A8AXZ7 Methyltransferase n=5 Tax=Streptococcus RepID=A8... 264 6e-69 UniRef50_A8J6H0 Predicted protein (Fragment) n=1 Tax=Chlamydomon... 264 7e-69 UniRef50_B5XY38 Ribosomal RNA large subunit methyltransferase I ... 260 1e-67 UniRef50_B0N335 Putative uncharacterized protein n=3 Tax=Bacteri... 259 3e-67 UniRef50_B5F1W3 Ribosomal RNA large subunit methyltransferase I ... 258 6e-67 UniRef50_Q12JE5 Ribosomal RNA large subunit methyltransferase I ... 257 8e-67 UniRef50_P39587 Putative ribosomal RNA large subunit methyltrans... 257 1e-66 UniRef50_C2HC77 S-adenosyl-L-methionine-dependent methyltransfer... 256 2e-66 UniRef50_C4FU68 Putative uncharacterized protein n=1 Tax=Catonel... 252 2e-65 UniRef50_Q6MCD2 Putative uncharacterized protein n=1 Tax=Candida... 251 7e-65 UniRef50_B7FV41 Predicted protein n=1 Tax=Phaeodactylum tricornu... 249 4e-64 UniRef50_C8NHK6 SAM (And some other nucleotide) binding motif, P... 247 1e-63 UniRef50_UPI00016C4550 methyltransferase n=1 Tax=Gemmata obscuri... 247 1e-63 UniRef50_C8W8S0 SAM-dependent methyltransferase n=2 Tax=Atopobiu... 246 2e-63 UniRef50_A8VSD5 Oligopeptide/dipeptide ABC transporter, ATPase s... 246 2e-63 UniRef50_O67850 Putative uncharacterized protein n=2 Tax=Aquific... 244 9e-63 UniRef50_D0LIJ5 Putative RNA methylase n=1 Tax=Haliangium ochrac... 244 1e-62 UniRef50_A5IRW8 SAM-dependent methyltransferase-like protein n=6... 244 1e-62 UniRef50_Q2LSE2 SAM-dependent methyltransferase n=1 Tax=Syntroph... 244 1e-62 UniRef50_Q1Q2N3 Putative uncharacterized protein n=1 Tax=Candida... 243 2e-62 UniRef50_A4J674 SAM-dependent methyltransferase n=33 Tax=Bacteri... 243 2e-62 UniRef50_C7N186 SAM-dependent methyltransferase n=13 Tax=Bacteri... 242 5e-62 UniRef50_A3J3C9 Putative uncharacterized protein n=1 Tax=Flavoba... 241 6e-62 UniRef50_B2UZQ1 Methyltransferase n=3 Tax=Clostridium botulinum ... 241 8e-62 UniRef50_A8DJY9 SAM-dependent methyltransferase n=2 Tax=Bacteria... 241 8e-62 UniRef50_Q3ITL0 Putative uncharacterized protein n=1 Tax=Natrono... 240 1e-61 UniRef50_C7GB40 Methyltransferase n=13 Tax=Bacteria RepID=C7GB40... 240 1e-61 UniRef50_C6XXB0 PUA domain containing protein n=4 Tax=Sphingobac... 240 1e-61 UniRef50_C9L1Z6 PUA domain protein n=33 Tax=Bacteria RepID=C9L1Z... 239 4e-61 UniRef50_D2R1D4 Methyltransferase small n=1 Tax=Pirellula staley... 239 4e-61 UniRef50_Q7ND71 Glr4365 protein n=1 Tax=Gloeobacter violaceus Re... 238 6e-61 UniRef50_C7H850 Methyltransferase n=8 Tax=Bacteria RepID=C7H850_... 238 6e-61 UniRef50_C0QT70 Methyltransferase n=2 Tax=Hydrogenothermaceae Re... 236 2e-60 UniRef50_A9GP63 Putative uncharacterized protein n=1 Tax=Sorangi... 236 2e-60 UniRef50_A1AUW2 SAM-dependent methyltransferase n=10 Tax=Desulfu... 236 3e-60 UniRef50_B5EPR2 Methyltransferase small n=2 Tax=Acidithiobacillu... 236 3e-60 UniRef50_A6Q436 Putative uncharacterized protein n=1 Tax=Nitrati... 235 5e-60 UniRef50_C1ZEX7 Predicted SAM-dependent methyltransferase n=1 Ta... 235 5e-60 UniRef50_A0LJE8 SAM-dependent methyltransferase n=1 Tax=Syntroph... 235 5e-60 UniRef50_C9MRP3 Methyltransferase n=7 Tax=Prevotella RepID=C9MRP... 234 7e-60 UniRef50_Q2IKG3 SAM-dependent methyltransferase n=6 Tax=Cystobac... 234 8e-60 UniRef50_C6IZE3 PUA domain-containing protein n=2 Tax=Bacillales... 234 1e-59 UniRef50_A7HKL6 PUA domain containing protein n=9 Tax=Thermotoga... 234 1e-59 UniRef50_C7RKQ3 PUA domain containing protein n=3 Tax=Proteobact... 233 1e-59 UniRef50_D2QFB5 Methyltransferase n=14 Tax=Bacteria RepID=D2QFB5... 233 2e-59 UniRef50_Q7MSX4 Putative uncharacterized protein n=1 Tax=Wolinel... 233 2e-59 UniRef50_B2V9T0 Methyltransferase small n=4 Tax=Bacteria RepID=B... 233 2e-59 UniRef50_Q025J5 SAM-dependent methyltransferase n=1 Tax=Candidat... 233 2e-59 UniRef50_B5YL48 Methyltransferase small domain family n=1 Tax=Th... 233 2e-59 UniRef50_B3DWI3 SAM-dependent methyltransferase n=1 Tax=Methylac... 233 2e-59 UniRef50_B2UN28 Putative SAM-dependent methyltransferase n=3 Tax... 232 3e-59 UniRef50_C6NWD6 LSU m5C1962 methyltransferase RlmI n=1 Tax=Acidi... 232 5e-59 UniRef50_D2QYD2 Putative uncharacterized protein n=1 Tax=Pirellu... 229 3e-58 UniRef50_A4S9U5 Predicted protein n=1 Tax=Ostreococcus lucimarin... 229 3e-58 UniRef50_Q11NR8 SAM-dependent methyltransferase n=1 Tax=Cytophag... 228 5e-58 UniRef50_Q2VZ09 Predicted SAM-dependent methyltransferase n=6 Ta... 228 6e-58 UniRef50_Q31EI2 SAM-dependent methyltransferase n=17 Tax=Gammapr... 228 7e-58 UniRef50_Q39XD7 SAM-dependent methyltransferase n=4 Tax=Desulfur... 227 9e-58 UniRef50_Q1D252 Putative uncharacterized protein n=3 Tax=Cystoba... 227 9e-58 UniRef50_A9E6J8 Putative uncharacterized protein n=5 Tax=Bactero... 227 9e-58 UniRef50_B3QNQ6 PUA domain containing protein n=12 Tax=Chlorobia... 227 1e-57 UniRef50_C0ZB58 Putative uncharacterized protein n=2 Tax=Firmicu... 226 2e-57 UniRef50_C6LAG7 Hydrogenase-4, F subunit n=4 Tax=Clostridiales R... 226 3e-57 UniRef50_A3DM75 Putative RNA methylase n=1 Tax=Staphylothermus m... 226 3e-57 UniRef50_A6CDL6 Putative uncharacterized protein n=1 Tax=Plancto... 226 3e-57 UniRef50_UPI00017455E0 hypothetical protein VspiD_12680 n=1 Tax=... 225 5e-57 UniRef50_D2BML1 SAM-dependent methyltransferase n=5 Tax=Lactobac... 225 5e-57 UniRef50_Q3JX99 Predicted SAM-dependent methyltransferases n=55 ... 225 6e-57 UniRef50_C9RKQ5 Putative RNA methylase n=1 Tax=Fibrobacter succi... 225 7e-57 UniRef50_B3PIV2 Putative lipoprotein n=12 Tax=Gammaproteobacteri... 225 7e-57 UniRef50_Q5SIT4 Putative uncharacterized protein TTHA1280 n=2 Ta... 224 7e-57 UniRef50_A7NRA9 SAM-dependent methyltransferase n=7 Tax=Bacteria... 224 1e-56 UniRef50_D0MIF2 Putative RNA methylase n=1 Tax=Rhodothermus mari... 223 1e-56 UniRef50_D0LV46 Putative RNA methylase n=1 Tax=Haliangium ochrac... 223 2e-56 UniRef50_B8BYT7 Predicted protein n=1 Tax=Thalassiosira pseudona... 223 2e-56 UniRef50_Q1AXR5 SAM-dependent methyltransferase n=5 Tax=Bacteria... 222 3e-56 UniRef50_Q1Q0N9 Similar to SAM-dependent methyltransferase n=1 T... 222 5e-56 UniRef50_B0S9E6 SAM-dependent methyltransferase n=2 Tax=Leptospi... 220 1e-55 UniRef50_B6GEK4 Putative uncharacterized protein (Fragment) n=2 ... 220 2e-55 UniRef50_B9XS18 Pseudouridine synthase n=1 Tax=bacterium Ellin51... 220 2e-55 UniRef50_B7DS77 Methyltransferase small n=2 Tax=Alicyclobacillus... 219 3e-55 UniRef50_A9GQV8 Putative uncharacterized protein n=1 Tax=Sorangi... 219 3e-55 Sequences not found previously or not previously below threshold: >UniRef50_A4SME4 Ribosomal RNA large subunit methyltransferase L n=273 Tax=Gammaproteobacteria RepID=RLML_AERS4 Length = 719 Score = 926 bits (2395), Expect = 0.0, Method: Composition-based stats. Identities = 420/715 (58%), Positives = 513/715 (71%), Gaps = 15/715 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M FA+ +GLE LL EL LGA + + GVHFKG+ + Y++ +WSR ASRI+L Sbjct: 1 MKEFFATCPKGLENLLADELTTLGAEQVRETVAGVHFKGELAIGYKACLWSRFASRIVLV 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L E ++ DLDLYLG I W E F+ +T AV F+G N IRN+QYGA+K+KDAIVD F Sbjct: 61 LSEFQMNDDLDLYLGAHTIPWEEHFSGTSTIAVDFTGTNPAIRNTQYGALKIKDAIVDRF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 T++ RP+VD+ APDIR+ L K A+I LDLSG LH R YR G AP+KE LA A Sbjct: 121 TKRGHVRPDVDKKAPDIRIMAHLGKGKANITLDLSGPALHQRFYRQGTGEAPLKENLACA 180 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 ++ RSGW G P++DPMCGSGTLLIEAA +A D AP L R R+GF W QHD +WQ + Sbjct: 181 MIARSGW-AGEPMMDPMCGSGTLLIEAAFIAADMAPALRRERFGFDRWLQHDSELWQSLM 239 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 EAQ RA++G+ +G D+D RV+ +AR NA+ AG+ LITF+ DV QL NPLP Sbjct: 240 MEAQVRAKRGMQRCEVKLFGCDADPRVLMKARDNAKAAGVAHLITFKQADVTQLENPLPM 299 Query: 301 GPY-------------GTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSA 347 G ++SNPPYGERL PAL+ +H LG ++ F GW +S+ SA Sbjct: 300 PAVVEGEVSQEEARQVGMLISNPPYGERLGEFPALLEVHQALGDALRRGFQGWRVSILSA 359 Query: 348 SPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFE 407 SP+LLSCL+LRADKQY+ NG L+C +NY +A + S+ VA+D+ NRLRKNLK E Sbjct: 360 SPELLSCLRLRADKQYRLFNGALECQLRNYQIALDSVASQK-EVAQDFANRLRKNLKTLE 418 Query: 408 KWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATI 467 KWA +EGI+CYRLYDADLPEYN A+DRY D++VVQEYA PK I A K RQRL D++ A I Sbjct: 419 KWASKEGIDCYRLYDADLPEYNAAIDRYQDYLVVQEYAAPKDIPAQKTRQRLLDMVQAAI 478 Query: 468 SVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHR 527 V G+ K++LK RERQ+GK QYQKL + +EV EY A LWVNL DYLDTGLFLDHR Sbjct: 479 KVTGMDGEKVILKVRERQEGKQQYQKLAAEQHRMEVQEYGARLWVNLYDYLDTGLFLDHR 538 Query: 528 IARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT 587 RRMLGQM+KGK FLNLF+YTGSATVHAGLGGA TTTVDMS TYL WA+ N+RLN L Sbjct: 539 QTRRMLGQMAKGKRFLNLFAYTGSATVHAGLGGASETTTVDMSHTYLNWAQDNMRLNSLV 598 Query: 588 GRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLR 647 GR H+ +QADCL WL EA++Q+DLIFIDPPTFSNSKRM+++FDVQRDHL LM+ LKRLL Sbjct: 599 GRQHKFVQADCLKWLSEADDQYDLIFIDPPTFSNSKRMDESFDVQRDHLLLMQHLKRLLA 658 Query: 648 AGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITAA 702 A GT++FSNNKR F+MDL GL GLKAQ IT KT +DF RN+ IHNCW+IT A Sbjct: 659 ADGTLVFSNNKRHFKMDLAGLEAAGLKAQNITSKTRPKDFERNQHIHNCWIITHA 713 >UniRef50_A1S601 Ribosomal RNA large subunit methyltransferase L n=7 Tax=Gammaproteobacteria RepID=RLML_SHEAM Length = 708 Score = 891 bits (2302), Expect = 0.0, Method: Composition-based stats. Identities = 363/710 (51%), Positives = 469/710 (66%), Gaps = 12/710 (1%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M + FA+ +G E L ELE LGA + GV+F YQ +W+RLASRI+L Sbjct: 1 MFNFFAAAPKGFEYALAKELETLGAENVRESVAGVYFSASLAQGYQITLWTRLASRIVLI 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L + S LY I+W F+ +TF++ F G I NSQ+GA+K+KDA+VD F Sbjct: 61 LFTGECQSAEQLYNAAYTIDWPSHFSNRSTFSIDFHGTGGFINNSQFGALKIKDAVVDRF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 +L RP+V + PD+R++ + +I ++ SG LH RGYR G AP+KE LAA Sbjct: 121 RDDDLSRPDVVKGHPDMRIDAHYGRGKITIGINFSGAALHQRGYRGNTGEAPLKENLAAN 180 Query: 181 IVMRSGW-QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 ++ RSGW LLDP CGSGT+LIEAA++A D APGL R R+GF W +HD+A+WQ+V Sbjct: 181 MLYRSGWADNPVTLLDPFCGSGTVLIEAALMACDIAPGLMRERFGFEHWRRHDQALWQQV 240 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 EA+ RA G FYGSD D+RV+ A+ NA AG+ + I F+V + L P+ Sbjct: 241 IEEAKARASLGKTRCQLKFYGSDIDSRVVALAKRNANSAGVFDFIDFKVANALNLEPPV- 299 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 G VL+NPPYGERL + +L+ L+ LG K +GGW L L + +L+S L+L+A Sbjct: 300 --AEGMVLTNPPYGERLGNVTSLLQLYFQLGEKFKQSYGGWKLGLLCSDMELVSSLKLKA 357 Query: 360 DKQYKAKNGPLDCVQKNYHVAESTPDSKPAMV--------AEDYTNRLRKNLKKFEKWAR 411 DKQ K NG L+C Y + ++ + A + NRL+KNLK+ EKWA+ Sbjct: 358 DKQMKMYNGALECAFNLYTLHATSTRRDIPVDTTGQGGEIAAPFANRLKKNLKQLEKWAK 417 Query: 412 QEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLG 471 +EGI+ YRLYDAD+PEYNVAVDRY D+VVVQEYA P I ++RL D++ A LG Sbjct: 418 REGIDSYRLYDADIPEYNVAVDRYLDYVVVQEYAAPSAIPEAVTKRRLTDVLLALPRALG 477 Query: 472 IAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARR 531 I P+K+VLKTRERQKG NQYQKL + L TEY +NLTDYLDTGLFLDHR+ R+ Sbjct: 478 IDPDKIVLKTRERQKGTNQYQKLDGEKLELVTTEYGCSFKLNLTDYLDTGLFLDHRLTRK 537 Query: 532 MLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAH 591 ++G+ +K +D LNLF+YTGSA+VHAG GGA+S TTVDMS TYL WA+ N LNGL GR + Sbjct: 538 LVGEKAKNRDVLNLFAYTGSASVHAGKGGAKSVTTVDMSNTYLNWAKDNFMLNGLIGRQY 597 Query: 592 RLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGT 651 + QADCL W+R+ QFDLIFIDPPTFSNSKRMED+FDVQRDH+ L+ LK+LLR GG Sbjct: 598 QFEQADCLQWIRDCERQFDLIFIDPPTFSNSKRMEDSFDVQRDHVDLLASLKKLLRPGGE 657 Query: 652 IMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 I+FSNNKR F+MD++ LA GLKA I K L D+ARN QIHNCW++T Sbjct: 658 IVFSNNKRKFKMDMEALAAAGLKAVNIDDKVLPMDYARNPQIHNCWVVTH 707 >UniRef50_A1SX09 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Psychromonas RepID=RLML_PSYIN Length = 749 Score = 889 bits (2298), Expect = 0.0, Method: Composition-based stats. Identities = 372/749 (49%), Positives = 488/749 (65%), Gaps = 51/749 (6%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M S F TA+GL LL+ EL+ +G Q + GGV F+G Y+ +WSR ASR++L Sbjct: 1 MLSYFIPTAKGLAPLLEVELKEMGIENPQQMNGGVKFEGTLEQGYKVCLWSRFASRVLLK 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L E KV +DLYLG I W F+ TF++ FSG ND IRN+Q+GA+K+KDAIVD F Sbjct: 61 LSEFKVLDSMDLYLGCSNIPWETHFDVDKTFSIDFSGTNDEIRNTQFGALKIKDAIVDRF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + RPNV + DIR N L K+ A+I LDLSG LHLRGYR AG AP++ETLAA Sbjct: 121 RKHFDERPNVQKRDADIRFNGRLWKDKATIYLDLSGSPLHLRGYRTIAGEAPLRETLAAG 180 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 I+ RSGWQ G LLDPMCGSGTL+IEAAM+A + APG R +GF W +HD+ WQ +K Sbjct: 181 IIKRSGWQ-GEALLDPMCGSGTLVIEAAMMALNIAPGSLRETFGFEKWKKHDQECWQTLK 239 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 AQ R+ + + + FYGSD +I+ AR NA+ AG+GE+I F V D ++ P + Sbjct: 240 TSAQVYGRRAVNQCETRFYGSDLSKDMIEIARKNAQRAGVGEVIEFSVTDAKKVLPP-EE 298 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G +++NPPYGERL S I L++ LG K+ F GWNLS+F+ +LLSCL +RA Sbjct: 299 LETGMLITNPPYGERLGSFSDTITLYTELGYHFKDAFAGWNLSMFAMDTELLSCLGMRAG 358 Query: 361 KQYKAKNGPLDCVQKNYHVAESTP------------------------------------ 384 K +K NGP++CV KNY ++ P Sbjct: 359 KSFKFFNGPIECVLKNYRISPKRPAVEVEPVAPKKTNKETPEPINPWTMGQNESVVEAAI 418 Query: 385 ------------DSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAV 432 KPA+ AE++ NRL KNLK+ EKWA++EG+ECYRLYDADLPEYNVA+ Sbjct: 419 ENESELVFKEVQQIKPAIYAEEFANRLLKNLKQLEKWAKREGVECYRLYDADLPEYNVAI 478 Query: 433 DRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQ 492 DRYA+++++QEY PK I+ K R+R D+++ VL + +KLV+K RERQKG+ QY+ Sbjct: 479 DRYAEYIIIQEYRAPKEIETQKVRRRFLDVVSTVRYVLNLPDDKLVIKVRERQKGRQQYE 538 Query: 493 KLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSA 552 KL K + L V E A + VNL DYLDTGLFLDHR R ++G M+KGKDFLNLF YT +A Sbjct: 539 KLDTKKQSLVVHEGQAKMLVNLQDYLDTGLFLDHRPTRLLIGNMAKGKDFLNLFCYTATA 598 Query: 553 TVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLI 612 +VHA LGGA+STT+VDMS+TYL W E N NG+ G+ H IQ DC+ WL+ A+E +DLI Sbjct: 599 SVHAALGGAKSTTSVDMSKTYLAWGEDNFAENGIKGK-HEFIQQDCIKWLQHAHEMYDLI 657 Query: 613 FIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLG 672 FIDPPTFSNSKRM D FDVQ DH+AL+ + L G I+FSNNKRGF++D+D + LG Sbjct: 658 FIDPPTFSNSKRMNDVFDVQEDHVALLTSASQRLNKQGEIIFSNNKRGFKLDVDAIKALG 717 Query: 673 LKAQEITQKTLSQDFARNRQIHNCWLITA 701 ++I+Q ++ +DF RN++IH CW++T Sbjct: 718 FYIKDISQSSIPEDFRRNKKIHQCWILTK 746 >UniRef50_Q0HJZ9 Ribosomal RNA large subunit methyltransferase L n=21 Tax=Alteromonadales RepID=RLML_SHESM Length = 713 Score = 878 bits (2269), Expect = 0.0, Method: Composition-based stats. Identities = 353/716 (49%), Positives = 470/716 (65%), Gaps = 17/716 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M + FA+ +G E L EL GA E + GV+F L Y+ +W+RLASRI+L Sbjct: 1 MLNFFAAAPKGFEYSLAQELTEFGATEIKESVAGVYFTAPLALAYRITLWTRLASRIVLV 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + + S LY I+W+ F+ TF++ F G I N+Q+GA+K+KDAIVD F Sbjct: 61 IYKGPCESAEQLYNAAYCIDWSSHFSNRNTFSIDFHGTGGFINNTQFGALKIKDAIVDRF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RPNV R DI+++ +IA++ SG LH RGYR G AP+KE LAA Sbjct: 121 RDDGDARPNVARIDADIKIDAHFRNGVITIAMNFSGPSLHQRGYRSTTGEAPLKENLAAN 180 Query: 181 IVMRSGWQPG-TPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 +++RSGW+ T LLDP CGSGT+LIEAA++A D APGL R R+GF W +HD+A W E+ Sbjct: 181 MLVRSGWKAAPTTLLDPFCGSGTVLIEAALMAADIAPGLQRSRFGFEHWRRHDKATWHEI 240 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 EA+ RA G+ FYGSD D+R++ A+ NA+ AG+ ELI F+V + + P Sbjct: 241 LEEAKARASLGVKRCDVKFYGSDIDSRLVALAKRNAQNAGVLELIDFKVANALNVEPPAG 300 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 + G +++NPPYGERL S L+ L+ LG K +FGGW +++ + +L+S L+L+A Sbjct: 301 E---GYLITNPPYGERLGSVSELLQLYYQLGDKFKKEFGGWKVAMLCSDIELISALKLKA 357 Query: 360 DKQYKAKNGPLDCVQKNYHV-AESTPDSKPAM--------VAEDYTNRLRKNLKKFEKWA 410 DKQ K NG L+C Y + A+ST P + +A + NR++KN K+ EKWA Sbjct: 358 DKQMKMFNGALECAFNLYTLHAQSTRRDTPVLPEGVDIADIAPAFANRIKKNAKQLEKWA 417 Query: 411 RQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVL 470 ++EGI+ YRLYDAD+PEYNVAVDRY D +VVQEY P +I ++RL D++ A + + Sbjct: 418 KKEGIDSYRLYDADIPEYNVAVDRYLDHIVVQEYMAPASIPEAVTKRRLSDVLLALPAAI 477 Query: 471 GIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIAR 530 G+ P+K+ +KTRERQKG NQYQKL E+ L TEY A +NLT YLDTGLFLDHR+ R Sbjct: 478 GVDPHKITMKTRERQKGTNQYQKLDERKLELITTEYGAKFKLNLTGYLDTGLFLDHRLTR 537 Query: 531 RMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRA 590 R++GQ SKG+ LNLFSYTGSA+VHA LGGA+S TTVDMS TYL WA+ N LN L+G+ Sbjct: 538 RLVGQKSKGRRVLNLFSYTGSASVHAALGGAKSVTTVDMSNTYLAWAKENFALNDLSGKQ 597 Query: 591 HRLIQADCLAWLR----EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLL 646 + +QADCL W+R + + Q+DLIFIDPPTFSNSKRMED+FDVQRDH+ L+ L +LL Sbjct: 598 YEFVQADCLQWIRDSALDKSAQYDLIFIDPPTFSNSKRMEDSFDVQRDHVNLLGMLIKLL 657 Query: 647 RAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITAA 702 G I+FSNNKR F+MD + LAK+ +K + I TL D+ RN IHN WLIT A Sbjct: 658 SPNGEIVFSNNKRKFKMDTETLAKMKIKVENIDDLTLPMDYKRNPHIHNTWLITHA 713 >UniRef50_A6V328 Ribosomal RNA large subunit methyltransferase L n=10 Tax=Gammaproteobacteria RepID=RLML_PSEA7 Length = 725 Score = 871 bits (2251), Expect = 0.0, Method: Composition-based stats. Identities = 334/723 (46%), Positives = 448/723 (61%), Gaps = 26/723 (3%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + LF + +GLE LL E + LG E + V +G + Y+ +WSRLA+R++L Sbjct: 4 VYELFLTCPKGLESLLLEEAQGLGLSEARAQVSAVRGQGSLEVAYRLCLWSRLANRVLLV 63 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L V + +YL V A+NW + + G T AV FSG I N+ +GA+KVKDAIVD Sbjct: 64 LARFPVENAESMYLAVHAVNWEDHLDAGGTLAVEFSGKGSGIDNTHFGALKVKDAIVDNL 123 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 ++ RP+VD+ PD+RV++ L + A+++LDLSG LH RGYR + G AP+KE LAAA Sbjct: 124 RERSGRRPSVDKVNPDVRVHLHLDRGQATLSLDLSGHSLHQRGYRLQQGAAPLKENLAAA 183 Query: 181 IVMRSGWQ----PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 +++R+GW G L DPMCG GT L+EAA++A D AP L R RWGFS W H A+W Sbjct: 184 VLIRAGWPKIAAEGGALADPMCGVGTFLVEAALMAADIAPNLRRERWGFSNWLGHVPALW 243 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 +++ EAQ RA GLA G ++D R+IQ AR N AG+ + + ++A Sbjct: 244 RKLHEEAQQRAAAGLARAPLWIRGYEADPRLIQPARNNIERAGVADWVKIYQGELATFEP 303 Query: 297 PLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQ 356 KG G V+ NPPYGERL E +L+ L+ LG ++ GW+ +F+ +P+L + Sbjct: 304 RPDKGQAGLVICNPPYGERLGDEASLLYLYQNLGERLRQSCIGWSAGVFTGAPELGKRMG 363 Query: 357 LRADKQYKAKNGPLDCVQKNYHVAEST-------------------PDSKPAMVAEDYTN 397 +R+ KQY NG L C V ++ + + + N Sbjct: 364 IRSHKQYAFWNGALACKLLMIQVEPRQFVTGERGERNDDGQARAPSEPARLSEGGQMFAN 423 Query: 398 RLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQ 457 RL+KNL++ KWAR++ +ECYRLYDAD+PEY +AVD Y DWV VQEYA PK++D KA+ Sbjct: 424 RLQKNLRQLGKWARRDKVECYRLYDADMPEYALAVDIYGDWVHVQEYAAPKSVDPAKAQA 483 Query: 458 RLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDY 517 RLFD +AA LG+A ++V+K RERQ GK QY++ +G+FLEV E L VNLTDY Sbjct: 484 RLFDALAAIPQALGVAQERVVVKRRERQAGKKQYERQSSEGKFLEVGEGGVRLLVNLTDY 543 Query: 518 LDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWA 577 LDTGLFLDHR R + + + GK FLNLF YT +ATVHA GGARSTT+VD+S+TYL+WA Sbjct: 544 LDTGLFLDHRPMRLRIQKEAAGKRFLNLFCYTATATVHAARGGARSTTSVDLSKTYLDWA 603 Query: 578 ERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLA 637 RNL LNG + R RL+ +D + WLRE + Q++LIFIDPPTFSNSKRME FDVQRD + Sbjct: 604 RRNLSLNGFSDR-QRLVHSDVMEWLREDDGQYELIFIDPPTFSNSKRMEGVFDVQRDQVE 662 Query: 638 LMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCW 697 L+ L GG + FSNN R F +D A+ +EIT +TL DFARN +IH W Sbjct: 663 LLDLAMARLAPGGVLYFSNNFRKFELDESVQARYA--VEEITGETLDPDFARNPKIHRAW 720 Query: 698 LIT 700 IT Sbjct: 721 RIT 723 >UniRef50_A6VMR3 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Gammaproteobacteria RepID=RLML_ACTSZ Length = 676 Score = 862 bits (2227), Expect = 0.0, Method: Composition-based stats. Identities = 414/716 (57%), Positives = 520/716 (72%), Gaps = 57/716 (7%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M LFA+ ARG EELLKTEL LGA + ++ QGGVHF D Y++L+WSRLASRI+LP Sbjct: 1 MKPLFATCARGFEELLKTELTELGAQDVRIAQGGVHFGADDETQYKTLLWSRLASRILLP 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + + K+YSDLDLY V + W E F+ F V F+G N IR+SQ+GAM+VKD IVD F Sbjct: 61 IAQSKIYSDLDLYSTVVSQAWLEHFDERTHFFVDFNGTNREIRHSQFGAMRVKDGIVDYF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 R RPNVD++ PD+R++ +L+++ ++LDLSG+ LH+RGYR+ +G AP++ETLAAA Sbjct: 121 ERHGKARPNVDKENPDVRIHAYLNRDDLILSLDLSGEALHMRGYREDSGQAPLRETLAAA 180 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +V+RSGWQ GTPL+DPMCGSGTLLIEAA + AP LHR WGF W H++A+W++VK Sbjct: 181 LVLRSGWQKGTPLVDPMCGSGTLLIEAAQMEAQIAPQLHRSHWGFDFWKGHNQAVWEKVK 240 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 AEA A + + NPL Sbjct: 241 AEAVALAEAQMEK------------------------------------------NPLRN 258 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G GTVL NPPYGERL + PALIAL+S+ G+ +K QFGGWN+S+FS+ LL CL++R+ Sbjct: 259 GEKGTVLCNPPYGERLGTTPALIALYSVFGQRLKQQFGGWNVSVFSSEQGLLDCLRMRSF 318 Query: 361 KQYKAKNGPLDCVQKNYHVAESTP---------------DSKPAMVAEDYTNRLRKNLKK 405 +Q+KAKNGPLDCVQKNY +++ + DS VA D+ NRL+KN+KK Sbjct: 319 RQFKAKNGPLDCVQKNYRISDRSSVQTDERAAENPAVSADSAHTDVATDFANRLQKNIKK 378 Query: 406 FEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAA 465 EKWA+Q+G++ YRLYDADLP+YN+AVDRY D +VVQEYA PK ID +K RQRL D + A Sbjct: 379 IEKWAQQQGLDAYRLYDADLPDYNLAVDRYGDHIVVQEYAAPKNIDENKTRQRLLDAVTA 438 Query: 466 TISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLD 525 T++V G+ +KL+LK R +QKG NQY+KL KGE+ VTEY A LWVNLTDYLDTGLFLD Sbjct: 439 TLAVTGVETSKLILKVRRKQKGSNQYEKLANKGEYFYVTEYGAKLWVNLTDYLDTGLFLD 498 Query: 526 HRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNG 585 HR+ R+MLG+M+K KDFLNLF+YTGSATVHA LGGA+STTTVDMS TYL WAE+NL LN Sbjct: 499 HRLTRKMLGEMAKDKDFLNLFAYTGSATVHAALGGAKSTTTVDMSNTYLNWAEQNLILND 558 Query: 586 LTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRL 645 + G+ H+LIQADCL WL ++QFDLIF+DPPTFSNSKRMED++DVQRDH+ LMK+LKR+ Sbjct: 559 VDGKRHKLIQADCLQWLMRCDKQFDLIFVDPPTFSNSKRMEDSWDVQRDHIKLMKNLKRI 618 Query: 646 LRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 LR GTI+FSNNKRGF+MD DGLA+LGL A EI+ KTL DF RN+QIHNCWL+T Sbjct: 619 LRPNGTIVFSNNKRGFKMDFDGLAQLGLNALEISAKTLPLDFERNKQIHNCWLLTR 674 >UniRef50_B4RZ48 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Alteromonas macleodii RepID=RLML_ALTMD Length = 699 Score = 861 bits (2226), Expect = 0.0, Method: Composition-based stats. Identities = 322/705 (45%), Positives = 453/705 (64%), Gaps = 10/705 (1%) Query: 1 MNSLFASTARGLEELLKTELENLGA-VECQVVQGGVHFKGDTRLVYQSLMWSRLASRIML 59 MN++ +T+RGL+ELLK E+ L + + G + F+G Y+ +WSRLA+R++ Sbjct: 1 MNTILVTTSRGLDELLKQEVLTLCPDAQIKQGPGTIQFEGSKEDAYKLCLWSRLANRVIW 60 Query: 60 PLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDA 119 L K LY I+W + T +V F G N I+N+Q+GA++VKDAIVD+ Sbjct: 61 VLASGKAGDAEALYNTAMGIDWQMQMDSRHTLSVQFIGTNFAIKNTQFGAVRVKDAIVDS 120 Query: 120 FTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAA 179 F + LPRP+V+R PDI V LH++ + +DL+G LH R YR G AP+KE +A+ Sbjct: 121 FVEQGLPRPSVERKTPDISVYARLHRDNVILGIDLAGASLHQRAYRQETGDAPLKEHIAS 180 Query: 180 AIVMRSGW--QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 A++MRSGW PL+D MCGSGT+ IEAA +A + APG+ R WGF+ W H+ +W Sbjct: 181 AMLMRSGWTENTDAPLVDLMCGSGTIAIEAAYIARNIAPGIKRSYWGFTKWLGHEATLWD 240 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 + +A + + Y D +++ A+ NA AG+ I+F +D + + P Sbjct: 241 SLLEDAISVQKPS---CGGGIYAGDFSRKMVAIAKANADFAGVFNDISFSQQDATKSSPP 297 Query: 298 LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 + G V+SNPPYGERL +LI L S G+ K + GW++SL S++ DLL L+L Sbjct: 298 V--ATPGYVVSNPPYGERLGELTSLIPLFSDWGKRFKEAWKGWHVSLLSSNRDLLRVLKL 355 Query: 358 RADKQYKAKNGPLDCVQKNYHVA-ESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIE 416 RA K Y NG L+C NY + ++T ++ NRL+KNLK+ + W + Sbjct: 356 RATKDYAMNNGKLECRLANYVLDEQNTVQFSEDAGNHEFANRLKKNLKRMKGWVKSANTN 415 Query: 417 CYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNK 476 CYR+YDADLP+YNVAVDRY DW+VVQEYAPPKT+ KAR+RL +++ +V G++P Sbjct: 416 CYRIYDADLPDYNVAVDRYGDWLVVQEYAPPKTVSEDKARKRLQEVLLHLPAVTGVSPKN 475 Query: 477 LVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQM 536 + LK R +QKG QY+K+ + GE +EV E A VNLTDYLDTGLFLDHR R+ + + Sbjct: 476 IALKVRAQQKGSKQYEKINQSGEMMEVFENGARFLVNLTDYLDTGLFLDHRNTRQKVKAL 535 Query: 537 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQA 596 S+GKD LNLFSYTGS +V A +GGA+S TTVDMS TYL+WA++N+ LN L+G H IQA Sbjct: 536 SQGKDVLNLFSYTGSVSVFAAMGGAKSVTTVDMSNTYLDWAKKNVALNKLSG-PHAFIQA 594 Query: 597 DCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSN 656 DC WL ++DLIFIDPP+FSNSKRM++ +DVQRDH+ ++ D K L+ GTI+FSN Sbjct: 595 DCTTWLGTHKGKYDLIFIDPPSFSNSKRMQNTWDVQRDHVKMLTDAKACLKEQGTIIFSN 654 Query: 657 NKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 NKRGF++D + LGL+ + IT++T+ +DFAR +IH CW++ + Sbjct: 655 NKRGFKLDETAVTALGLQVENITKETIPEDFARKGKIHQCWVLRS 699 >UniRef50_A4XWP8 Ribosomal RNA large subunit methyltransferase L n=7 Tax=Proteobacteria RepID=RLML_PSEMY Length = 725 Score = 860 bits (2223), Expect = 0.0, Method: Composition-based stats. Identities = 331/723 (45%), Positives = 450/723 (62%), Gaps = 26/723 (3%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 + + +GLE LL E LG E + V + + + Y+ +WSRLA+R++L L Sbjct: 5 YEIVLTCPKGLEGLLLEEARALGLEEAREQTAAVRGQAELEVAYRLCLWSRLANRVLLVL 64 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 + + +LY GV+A++W + P + AV FSG I NS +GA+KVKDAIVD Sbjct: 65 SRFSMNNAEELYEGVKAVDWRDHLEPAGSLAVEFSGHGSGIDNSHFGALKVKDAIVDRLR 124 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 RP++D+ PD+RV++ L + A ++LDLSG LH RGYR + G AP+KE LAAA+ Sbjct: 125 TAGGERPSIDKINPDLRVHLRLDRGEAVLSLDLSGHSLHQRGYRLQQGAAPLKENLAAAV 184 Query: 182 VMRSGWQ----PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 ++R+GW G L DPMCG GT LIEAA++A D AP L R RWGFS W H AIW+ Sbjct: 185 LIRAGWPRIAAEGGALADPMCGVGTFLIEAALMAADVAPNLKRERWGFSNWLGHVPAIWK 244 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 ++ AEA+ RA GLA G ++D R+IQ R N AG+ + + ++ Sbjct: 245 KLHAEAEQRAAAGLARPPLWIRGYEADPRLIQPGRNNVERAGLSDWVKIYQGELGSFEPR 304 Query: 298 LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 + G V+SNPPYGERL E +L+ L+ LG ++ GW ++F+ +P+L + L Sbjct: 305 PDQNQKGLVISNPPYGERLGDEASLLYLYQNLGERLRQACLGWEAAVFTGAPELGKRMGL 364 Query: 358 RADKQYKAKNGPLDCVQK-------------------NYHVAESTPDSKPAMVAEDYTNR 398 R+ KQY NG L C + VAE++ ++ + + + NR Sbjct: 365 RSHKQYSFWNGALACKLLLIKVQTEQFVTGERRTRTEDEPVAEASSQARLSEGGQMFANR 424 Query: 399 LRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQR 458 L+KNLK+ KWAR+EG+ECYRLYDAD+PEY +AVD Y DWV VQEYA P+++D KA+ R Sbjct: 425 LQKNLKQLGKWARREGVECYRLYDADMPEYALAVDLYRDWVHVQEYAAPRSVDPDKAQAR 484 Query: 459 LFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYL 518 L D +AA LG+A +++ +K RERQ G QYQ+ +G+F+EV+E L VNLTDYL Sbjct: 485 LLDALAAIPQALGVAQSRVAIKRRERQTGTKQYQRQAAQGQFMEVSEGGVKLLVNLTDYL 544 Query: 519 DTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAE 578 DTGLFLDHR R + + + GK FLNLF YT +ATVHA GGARSTT+VD+S+TYL+WA Sbjct: 545 DTGLFLDHRPLRLRIQREAAGKRFLNLFCYTATATVHAAKGGARSTTSVDLSKTYLDWAR 604 Query: 579 RNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLAL 638 RNL LNG + + HRL Q D +AWL E ++DLIFIDPPTFSNSKRME FDVQRDH+ L Sbjct: 605 RNLSLNGFSDK-HRLEQGDVMAWLAEDRGEYDLIFIDPPTFSNSKRMEGVFDVQRDHVEL 663 Query: 639 MKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWL 698 + L GG + FSNN R F++D +A+ + +EI+ +TL DFARN +IH W Sbjct: 664 LDLAMARLAGGGVLYFSNNFRKFQLDESLVAR--YQVEEISAQTLDPDFARNPKIHRAWR 721 Query: 699 ITA 701 TA Sbjct: 722 FTA 724 >UniRef50_Q3KFC5 Ribosomal RNA large subunit methyltransferase L n=23 Tax=Bacteria RepID=RLML_PSEPF Length = 756 Score = 845 bits (2184), Expect = 0.0, Method: Composition-based stats. Identities = 325/753 (43%), Positives = 431/753 (57%), Gaps = 57/753 (7%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 LF + +GLE LL E LG E + V Y+ +WSRLA+R++L L Sbjct: 6 ELFLTCPKGLEGLLIEEAVGLGLEEAREHTSAVRGMATMETAYRLCLWSRLANRVLLVLK 65 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + + DLY GV ++W + T AV FSG I N+ +GA+KVKDAIVD Sbjct: 66 RFPMKNAEDLYHGVLDVDWQDHMLADGTLAVEFSGHGSGIDNTHFGALKVKDAIVDKLRT 125 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 RP++D+ PD+R+++ L + A ++LDLSG LH RGYR + G AP+KE LAAAI+ Sbjct: 126 PQGDRPSIDKLNPDLRIHLRLDRGEAILSLDLSGHSLHQRGYRLQQGAAPLKENLAAAIL 185 Query: 183 MRSGWQ----PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 +RSGW G L DPMCG GT L+EA M+A D AP L R +WGF+ W H A+W++ Sbjct: 186 IRSGWPRIAAEGGALADPMCGVGTFLVEAGMIAADMAPNLRREQWGFTAWLGHVPALWKK 245 Query: 239 VKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 + EA RA GLA+ G ++D R+IQ R N AG+ E I +VA Sbjct: 246 LHEEAVERAAAGLAKPPLWIRGYEADPRLIQPGRNNVERAGLSEWIKIYQGEVATFEPRP 305 Query: 299 PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 + G V+ NPPYGERL E +L+ L+ LG ++ W ++F+ +PDL + +R Sbjct: 306 DQNQKGLVICNPPYGERLGDEASLLYLYQNLGERLRQACLNWEAAVFTGAPDLGKRMGIR 365 Query: 359 ADKQYKAKNGPLDCVQKNYHVAEST----------------------------------- 383 + KQY NG L C V Sbjct: 366 SHKQYSFWNGALPCKLLLIKVLPDQFVTGERRTPEQRQAEREQAAYDQTPNEPQERKFNK 425 Query: 384 ---------------PDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEY 428 + + + + NRL+KNLK KW ++EGI+CYR+YDAD+PEY Sbjct: 426 NGNPIKPTPAPAPVIEQPRLSEGGQMFANRLQKNLKAMSKWVKREGIDCYRVYDADMPEY 485 Query: 429 NVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGK 488 +A+D Y DWV VQEYA PK+ID KA R+FD +AA L I +++V+K RERQ G Sbjct: 486 AMAIDLYHDWVHVQEYAAPKSIDPEKASIRMFDALAAIPQALNIDKSRVVVKRRERQSGT 545 Query: 489 NQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSY 548 QY++ +G+F EVTE L VNLTDYLDTGLFLDHR R + + + GK FLNLF Y Sbjct: 546 KQYERQAAQGKFNEVTEGGVKLLVNLTDYLDTGLFLDHRPMRMRIQKEAAGKRFLNLFCY 605 Query: 549 TGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQ 608 T +A+VHA GGARSTT+VD+S+TYL+WA RNL LNG + + RL Q D +AWL E+ Sbjct: 606 TATASVHAAKGGARSTTSVDLSKTYLDWARRNLSLNGFSDKN-RLEQGDVMAWLENCREE 664 Query: 609 FDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGL 668 +DLIFIDPPTFSNSKRME FDVQRD + L+ L +GG + FSNN R F+++ D L Sbjct: 665 YDLIFIDPPTFSNSKRMEGIFDVQRDQVQLIDLAMARLASGGVLYFSNNFRKFQLE-DNL 723 Query: 669 AKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 A+ +EIT T+ DFARN +IH W ITA Sbjct: 724 AER-YAVEEITASTIDPDFARNGKIHRAWKITA 755 >UniRef50_A6VW36 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Marinomonas RepID=RLML_MARMS Length = 721 Score = 843 bits (2178), Expect = 0.0, Method: Composition-based stats. Identities = 294/703 (41%), Positives = 440/703 (62%), Gaps = 12/703 (1%) Query: 6 ASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECK 65 + GLE +L+ EL G + ++ + V D +Y++ +WSR+A+R+MLP+ K Sbjct: 19 ITCPLGLENVLEKELHGEGLTQTRLGEAQVKLTTDLEGMYKACLWSRVATRVMLPIANFK 78 Query: 66 VYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNL 125 + S DLY GV+AI W++ N T A+ G N IRN+Q+GA++ KDAI D F + Sbjct: 79 MESADDLYDGVKAIQWSDHMNASNTIAIDCHGTNHHIRNTQFGAVRAKDAIADYFVALSG 138 Query: 126 PRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRS 185 RP+V+++ P++R+ + + +E ++++DLSG+ +H RGYR + G+AP+KE LAA +++R+ Sbjct: 139 ERPSVEKEQPEVRIALRIKREVVTVSIDLSGESMHRRGYRQQGGMAPLKENLAAGLLLRA 198 Query: 186 GWQPG---TPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 GW T L+DPMCGSGT L+EAAM++ D APGL R WGF GW QHD +WQ++ Sbjct: 199 GWGTDCGLTQLIDPMCGSGTFLVEAAMMSLDMAPGLRRPYWGFKGWKQHDHRMWQQLMDF 258 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 A+ R +K A F G+D + + I AR N + AG+ ++I + + + Sbjct: 259 AKNR-KKDPATLGIRFQGTDREQKAIAAARENIKRAGLTDVIDVTMSSFQEHEFDINPDA 317 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 G +++NPPYGER+ E ALIAL+ LG + GW + +++ L + +R +K Sbjct: 318 PGLLITNPPYGERIGDEMALIALYRQLGEWVVTHVRGWQFMMLTSNDHLARQIPVRPEKS 377 Query: 363 YKAKNGPLDCVQKNYHVAESTPDSKPAMV------AEDYTNRLRKNLKKFEKWARQEGIE 416 + NG ++C + + + A+ + NRL+KN KK +KW + I+ Sbjct: 378 TRVINGGIECRAYQFPLLAGSIKEDVVAQSVMTPGAQMFANRLQKNAKKLKKWVEKNKIQ 437 Query: 417 CYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNK 476 CYR+YDAD+PEY+VA+D Y +W VQEY PK+ID KA+QRLF++++A + L I+ + Sbjct: 438 CYRVYDADMPEYSVAIDIYGNWAHVQEYQAPKSIDPEKAKQRLFEVMSAIPTALNISESN 497 Query: 477 LVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQM 536 ++LK R+RQ GK QY+K + + V EY VNL DYLDTGLFLDHR R+++ Sbjct: 498 VILKQRQRQTGKEQYEKFDQTKHEMIVEEYGCEFIVNLKDYLDTGLFLDHRPVRKLIQDK 557 Query: 537 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQA 596 + G FLNLF YT +A+VHAG GGARS+ +VDMS TY EWA RN+ LN + R H++ +A Sbjct: 558 ANGVRFLNLFCYTATASVHAGQGGARSSLSVDMSNTYTEWARRNIELNEFSDRYHQVERA 617 Query: 597 DCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSN 656 DC+ WL+++ ++FDLIF+DPPTFSNSK+M D D+QRDH L++ L GG ++FSN Sbjct: 618 DCIEWLKQSRDKFDLIFMDPPTFSNSKKMADILDIQRDHGELVRLAMARLARGGELIFSN 677 Query: 657 NKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 N R F +D + + IT++TL DF RN +IH C++I Sbjct: 678 NYRRFVLDE--ALEQEYDVKNITRETLDPDFDRNDKIHQCYII 718 >UniRef50_Q60AX5 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Gammaproteobacteria RepID=RLML_METCA Length = 738 Score = 835 bits (2157), Expect = 0.0, Method: Composition-based stats. Identities = 333/734 (45%), Positives = 429/734 (58%), Gaps = 41/734 (5%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 FA+ +GLE LL EL+ LGA + + GV F+G Y+ +WSRLA+RI++ L Sbjct: 6 DFFATAPKGLEPLLVRELDGLGAESIKETRAGVEFRGTLETAYRVCLWSRLANRILMSLD 65 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + LY GVQ +W F PGAT AV FS I ++ +GA KVKDAI D F Sbjct: 66 RFAAATPEALYDGVQRTDWGRHFGPGATLAVDFSSRRSAITHTLFGAQKVKDAIADQFLE 125 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 RP+V + PDIR+NV L + A I LDLSGD LH RGYR AG AP+KE LAAA++ Sbjct: 126 HCGRRPSVRLERPDIRINVHLDADQAVIGLDLSGDSLHRRGYRTEAGPAPLKENLAAAVL 185 Query: 183 MRSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 +R+GW G L+DPMCGS TLLIE A+LA D APG R +GF W HD +W++ Sbjct: 186 IRAGWPDIAARGGSLIDPMCGSATLLIEGALLAADIAPGSFREYFGFLAWKGHDLELWRK 245 Query: 239 VKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 + EA+ RA GLA G D D R I A N AG+ I E K A + Sbjct: 246 LLTEARERAEAGLARLPP-ILGYDLDRRAIHLALDNIDRAGLRGRIHVERKVAADVR--- 301 Query: 299 PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 PKG G V+ NPPYGERL +LI ++ G ++ F GWN +L + + +L + +R Sbjct: 302 PKGRPGLVVVNPPYGERLGDVESLIPVYREFGETLQRHFRGWNAALLTGNFELAFQIGIR 361 Query: 359 ADKQYKAKNGPLDCVQKNYHVAES-------------------------TPDSKPAMVAE 393 A + + NG L+C + +A + PA +E Sbjct: 362 AGRYHTLYNGALECRLFLFDIAPERFFTPRSGVPETEGQKKLRQIVEKARRGAIPAEQSE 421 Query: 394 DYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD---WVVVQEYAPPKTI 450 + NRLRKNL+ WAR+ G+ CYRLYDADLPE+ VAVD Y WV VQEY P ++ Sbjct: 422 MFANRLRKNLRNLGTWARRNGVSCYRLYDADLPEFAVAVDIYQGEKLWVHVQEYEAPASV 481 Query: 451 DAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHL 510 D KA+ RL +A VL + ++ LK R RQKG QY K G+ F V E Sbjct: 482 DPAKAQSRLAGAVAMIPEVLEVPREQIFLKVRRRQKGDAQYVKQGQTAHFHVVEEGGWRF 541 Query: 511 WVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMS 570 WVN DYLDTGLFLDHRI R ++ Q+++ + FLNLF+YTG+ATV+A GGA STTTVDMS Sbjct: 542 WVNFEDYLDTGLFLDHRITRGLIQQVARDRHFLNLFAYTGTATVYAAGGGAASTTTVDMS 601 Query: 571 RTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA---NEQFDLIFIDPPTFSNSKRMED 627 TYL+WA RNL LNG R H IQADCL WL +A ++ LIF+DPPTFSNSKRM Sbjct: 602 HTYLDWAGRNLALNGFGERDHLRIQADCLDWLEQAVDRRRRYGLIFLDPPTFSNSKRMTG 661 Query: 628 AFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDF 687 +FD+QRD L+K + LL GG ++FS N+R FR+D LA G +++++ TL +DF Sbjct: 662 SFDIQRDQGPLLKKVVSLLEPGGMLIFSTNRRRFRLDETALA--GCAVEDVSRVTLPKDF 719 Query: 688 ARNRQIHNCWLITA 701 RN +IH CW I A Sbjct: 720 ERNPRIHACWRILA 733 >UniRef50_Q47Z09 Ribosomal RNA large subunit methyltransferase L n=1 Tax=Colwellia psychrerythraea 34H RepID=RLML_COLP3 Length = 715 Score = 833 bits (2153), Expect = 0.0, Method: Composition-based stats. Identities = 329/707 (46%), Positives = 452/707 (63%), Gaps = 11/707 (1%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 A T+ G+E LL E+++LGA GV+F+ L Y+ +W+RLA+RIML L Sbjct: 6 QQFLALTSPGIEVLLFDEIKSLGAFNVIQKPEGVYFQASLALGYKISLWTRLATRIMLKL 65 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 GE + +L+ +INW ++F TFAV F G ++ IRNSQ+G + +KDAIVD F Sbjct: 66 GEGEAKDKDELFKAASSINWPDIFKSTTTFAVDFVGYSEEIRNSQFGGLTIKDAIVDQFR 125 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 + RPNVD+ AP I L ++ +I LD SG GL RGYR+ +G AP+KE LAAA+ Sbjct: 126 DQGFERPNVDKKAPQISFQARLLRDNVTIFLDFSGRGLFQRGYREHSGAAPLKENLAAAL 185 Query: 182 VMRSGW--QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 ++RSGW PL+DPMCGSGT+LIEA +A +AP ++R WGF W HD A+WQ+ Sbjct: 186 IIRSGWLNDTSKPLVDPMCGSGTILIEAVSMAAKQAPAINRQSWGFEAWLSHDNAVWQKQ 245 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 A + + ++ +G D D RV++ A+ NAR A + + I F K+ + N Sbjct: 246 LTLAIDSSEENMSNLKVKVFGIDIDERVLRTAQQNARNAQLHQYIEFTCKNTNDMDNTF- 304 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 G GT+L NPPYGER+ P L+ L G+ +K QF W +++ +A+ DLLS L+L + Sbjct: 305 -GQPGTILFNPPYGERIGELPELVENFVLFGQKLKMQFKDWRIAILTANVDLLSMLKLSS 363 Query: 360 DKQYKAKNGPLDCVQKNYHVAEST-------PDSKPAMVAEDYTNRLRKNLKKFEKWARQ 412 K+YK KNGPLDC Y++ P S A + NRL+KN K + W + Sbjct: 364 FKRYKFKNGPLDCQLALYNLDAKQGAKDAINPQSDFAEEDSAFANRLKKNRKNLKGWLKS 423 Query: 413 EGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGI 472 IE YRLYD D+PEYNVA+D Y +++V+QEYA PKTI+ KA++RL ++I VL I Sbjct: 424 NEIEAYRLYDGDIPEYNVAIDIYGEYLVIQEYAAPKTIEEDKAKKRLQEVIYWAPKVLNI 483 Query: 473 APNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRM 532 +K++LKTR +Q+G NQY++L + + L + E+ A +NL DYLDTGLFLDHR R++ Sbjct: 484 PTDKVILKTRAKQRGANQYERLEKTKQSLTINEHGALFKINLWDYLDTGLFLDHRKTRQI 543 Query: 533 LGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHR 592 + + S+GK LNLF+YTGS +V A + GA S TTVDMS TYL WAE N LN L G ++ Sbjct: 544 VAKKSQGKSLLNLFAYTGSVSVQAAVQGAASITTVDMSNTYLNWAEDNFALNKLNGHKYQ 603 Query: 593 LIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTI 652 IQADCL WL++ +FD+IFIDPPTFSNSKRMED+FDVQRDH+ L+ D + L GG I Sbjct: 604 FIQADCLDWLKKNVNKFDVIFIDPPTFSNSKRMEDSFDVQRDHVDLITDALKSLNRGGEI 663 Query: 653 MFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 F+NNKR F++D + L +LGL A+ ++ T +DFARN+ IHN W I Sbjct: 664 FFTNNKRNFKIDFEALDELGLTAEAMSDVTRDKDFARNKHIHNSWSI 710 >UniRef50_Q1N650 Putative uncharacterized protein n=2 Tax=Oceanospirillaceae RepID=Q1N650_9GAMM Length = 738 Score = 830 bits (2145), Expect = 0.0, Method: Composition-based stats. Identities = 319/708 (45%), Positives = 443/708 (62%), Gaps = 30/708 (4%) Query: 21 ENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAIN 80 +LGA E ++ V + D +L Y++ +WSRLASR++ P+ E + S LY +++IN Sbjct: 33 TSLGASEVKLGVAFVACRADLQLAYKACIWSRLASRVLWPIAEGQGESAEALYDCIKSIN 92 Query: 81 WTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVN 140 W E F+ +F +HF+G + IRN+ +GA+K KDAI D F RP+V D PDI ++ Sbjct: 93 WIEHFSDRQSFKIHFTGKSPDIRNTHFGALKAKDAICDYFRELTGNRPDVS-DQPDIHIH 151 Query: 141 VWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGW-----QPGTPLLD 195 V LHK ++D +G+ LH RGYR G AP+KE LAAAIVMRSGW Q LLD Sbjct: 152 VRLHKGVIKTSIDFAGEPLHKRGYRQSQGAAPLKENLAAAIVMRSGWPSMMKQTEAALLD 211 Query: 196 PMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLA-EY 254 PMCGSGTLLIEAA++A + APGL R ++ W QH W+ VKA+AQ + + L E Sbjct: 212 PMCGSGTLLIEAALIAANIAPGLLRSQYAVERWKQHQRDEWRVVKADAQEKKEQALQTET 271 Query: 255 SSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGE 314 G D D RVIQ+A NA AG+ + F V+ +A G ++ NPPYGE Sbjct: 272 ELTLLGYDMDERVIQKAIQNAIRAGVQHYVHFSVQALADWRREKGLPDEGLIVCNPPYGE 331 Query: 315 RLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQ 374 RL E A+ AL++ +G K F GW +++F+ +P ++RADKQY+ NG + Sbjct: 332 RLSDEVAIGALYAAMGNKAKQFFPGWKMAIFTGNPQQAYQFKMRADKQYQMFNGAIPSKL 391 Query: 375 KNYHVAEST------------------PDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIE 416 Y +++ + + K A+ NR++KNLKK ++A+++ Sbjct: 392 MVYGISKDSDKHFVESTEARSIESGDSANIKLNDGAQMVANRIKKNLKKIVRYAKKQKTN 451 Query: 417 CYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNK 476 CYR+YDAD+PEY VAVD Y DWV VQEYAPPK++D KA+ RL D++ A L + + Sbjct: 452 CYRVYDADMPEYAVAVDVYGDWVHVQEYAPPKSVDPEKAQNRLRDVLDALPVALNVDRER 511 Query: 477 LVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQM 536 + LK R+ QKGK QYQK+ E+ F EV E + +VN+TDYLDTGLFLDHR R + + Sbjct: 512 IALKQRQVQKGKKQYQKVDEQASFFEVQEGSCRFYVNMTDYLDTGLFLDHRPIRTDIETL 571 Query: 537 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQA 596 +KGKDFLNLFSYT +A+VHA +G ARSTT+VDMS+TYL W RNL LNG+ + H IQA Sbjct: 572 AKGKDFLNLFSYTCTASVHAAVGEARSTTSVDMSQTYLNWGRRNLTLNGIAEKYHHFIQA 631 Query: 597 DCLAWLRE---ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIM 653 DC+ WL++ +++FDLIF+DPP+FSNSKRM DVQRDH+ L++ LL+ G ++ Sbjct: 632 DCMQWLKDVQSESKRFDLIFMDPPSFSNSKRMIGVLDVQRDHVELIELAMGLLKPNGILI 691 Query: 654 FSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 FSNN + F++D D L K + +++ KT+ DF RN +IH C+ I+A Sbjct: 692 FSNNLKRFKLDFDALNK--FEVIDVSAKTIPDDFTRNAKIHQCFQISA 737 >UniRef50_C0N217 Putative RNA methylase family UPF0020 n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N217_9GAMM Length = 734 Score = 828 bits (2140), Expect = 0.0, Method: Composition-based stats. Identities = 310/732 (42%), Positives = 427/732 (58%), Gaps = 34/732 (4%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 + ARG+ LL EL+ LG + G + F G+ Y+ +WSR+A R+++P+ Sbjct: 5 YKFTVTAARGMLPLLADELKQLGIKNSKQEAGNIRFTGELEDAYKVCLWSRVAIRVLMPI 64 Query: 62 GECKVYSDLDLYLGVQAINWTEMFN-PGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + LY GV+A+ W E N +T AV F+ I++SQYGA KVKDAIVD F Sbjct: 65 AHLNAETPEQLYDGVKALAWEEHINAEDSTLAVDFNSFRSKIKHSQYGAQKVKDAIVDRF 124 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + RP+VD PD+R+NV++ A +++DLSG+ LH RGYR AP+KE LAAA Sbjct: 125 REQTGLRPSVDLFQPDLRINVYVKHNQAIVSIDLSGESLHKRGYRTHNTAAPLKENLAAA 184 Query: 181 IVMRSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 I++++ W + G L+DPMCGSGT LIEAAM+A D APG+ R +GFS W QHD W Sbjct: 185 ILLKAEWPRLAKQGWALVDPMCGSGTFLIEAAMIAADIAPGIARDYFGFSFWKQHDRECW 244 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 + +KA+A+ R + GLA G D+D++ + AR N AG+ E I + + + Sbjct: 245 KRLKADAERRRQAGLARLPV-MLGGDNDSKAVLAARENIAEAGLAERIQVHERSLLDWPS 303 Query: 297 PLPKGPY-GTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCL 355 P G ++ NPPYGER+ L L+ LG ++ GW +L + + L Sbjct: 304 VSRDLPNVGLMVCNPPYGERIGQRDELHHLYESLGNVIHEFLPGWRTALITDNAQLGKFT 363 Query: 356 QLRADKQYKAKNGPLDCVQKNYHVAESTPDSK----------------------PAMVAE 393 L NGP+ C Y + ++ Sbjct: 364 GLTMFDTVPFDNGPIPCDVLFYRAPKPVRSTEMLHASSLTDEDSEAVADATKVTITEQGR 423 Query: 394 DYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAH 453 + NRL KN+K KWAR+ + CYR+YDADLP+Y A+D Y ++V VQEYAPPK ID Sbjct: 424 MFANRLMKNIKHLAKWARKNELSCYRVYDADLPDYAFAIDLYGEYVHVQEYAPPKQIDPQ 483 Query: 454 KARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVN 513 KA +RL + + VL + N++VLK R++Q+G QY+ + EV E WVN Sbjct: 484 KAVERLKEAMQLIPEVLDLPSNQVVLKVRQKQRGTQQYEVQSSHNQRFEVAENGLKFWVN 543 Query: 514 LTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTY 573 LTDYLDTGLFLDHR R++L Q + GKDFLNLFSYTGSATV+A G A+STT+VDMS TY Sbjct: 544 LTDYLDTGLFLDHRDTRQLLLQKAAGKDFLNLFSYTGSATVYAAAGQAKSTTSVDMSNTY 603 Query: 574 LEWAERNLRLNGLTGRAHRLIQADCLAWL---REANEQFDLIFIDPPTFSNSKRMEDAFD 630 L WA+ N+RLN L G H ++A+CL WL ++ ++F LIF+DPPTFSNS RME FD Sbjct: 604 LAWAQDNMRLNQLNGEQHHFVRANCLEWLQAAQQEQQRFGLIFLDPPTFSNSSRMEGVFD 663 Query: 631 VQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARN 690 +QRDH++L+K LL G ++FS N+R F++ +D L+ L +ITQ TL +DF RN Sbjct: 664 IQRDHVSLLKMTSHLLTDDGCLIFSTNRRDFKLAVDELS--DLDISDITQSTLPKDFERN 721 Query: 691 RQIHNCWLITAA 702 +IH CW+I A Sbjct: 722 NKIHYCWMIRRA 733 >UniRef50_Q5X0J6 Ribosomal RNA large subunit methyltransferase L n=6 Tax=Legionella RepID=RLML_LEGPL Length = 707 Score = 827 bits (2136), Expect = 0.0, Method: Composition-based stats. Identities = 305/708 (43%), Positives = 427/708 (60%), Gaps = 19/708 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 SLF S A+GLE LL+ EL+ LG QV GV+ + ++Y +WSRLA+RI L L Sbjct: 3 YSLFISCAKGLEYLLEDELKGLGLHVTQVSPQGVYGEASLPVIYNLCLWSRLANRIQLIL 62 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 + ++ +W +F T A+ F G ++ IRN+ +GA VKD IVD F Sbjct: 63 FSGHAAKEQAVHQLCTDFHWQTVFTHDKTIAIEFHGASEQIRNTMFGAQIVKDGIVDHFR 122 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 R N RP+VD++ P I ++ L + +++ DL G LH RGYR +AG AP+KE +AAA+ Sbjct: 123 RLNGSRPSVDKEKPQILIHAHLKNDILTVSFDLVGYSLHQRGYRKKAGKAPLKENVAAAM 182 Query: 182 VMRSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 ++R+ W G L DP CGSGTL+IEAAM+A APGL R WA+H ++W+ Sbjct: 183 LLRAKWPELAAQGYGLHDPFCGSGTLVIEAAMMAAHIAPGLLRQDQSLQYWARHQSSLWE 242 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 +++ +A + + + G+D+D++V+ AR+NA AG+ L+ F L Sbjct: 243 KLRTQALQQVKP----LAVKLVGTDTDSKVVALARSNAERAGVLPLVEFNT---LSLNAC 295 Query: 298 LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 P G V+ NPPYGERL L+ L+ LG + + GW ++ ++SP L L L Sbjct: 296 RPGTKRGLVVCNPPYGERLGEVTQLVPLYQQLGTTLHTCYQGWQAAILTSSPVLAKALGL 355 Query: 358 RADKQYKAKNGPLDCVQKNYHVA-----ESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQ 412 RADKQY NGPL+C ++ ++TP++ + A+ NRL KN +KWAR+ Sbjct: 356 RADKQYTLYNGPLECKLYCLTLSAANKLKNTPNAPLSDNAQMLFNRLEKNRNHLQKWARK 415 Query: 413 EGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGI 472 I CYR+YDADLPEY A+D Y D+ V+QEYAPP +I HKA +R +++ LGI Sbjct: 416 NQITCYRIYDADLPEYAYAIDIYNDYAVLQEYAPPASIPVHKAEKRSLEMLQVVPRALGI 475 Query: 473 APNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRM 532 P KL++K R++QKG QYQK+G+ + VTE A L VNL DYLDTGLFLDHR+ R Sbjct: 476 HPEKLIVKQRKQQKGSEQYQKIGKTSQRQIVTEGKAKLIVNLYDYLDTGLFLDHRLMRLK 535 Query: 533 LGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHR 592 Q+ +G FLN F YT SA+VHA L GA TT VD+S+TYL WAE N RLN + H+ Sbjct: 536 FAQLEQGTRFLNCFCYTASASVHAALAGAL-TTNVDLSKTYLLWAEDNFRLNDINLSKHQ 594 Query: 593 LIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTI 652 +Q DC W++ ++FD+IF+DPP+FSNSKRM D D+QRDH++L+ RLL G + Sbjct: 595 FLQYDCKEWMKTTRDKFDVIFLDPPSFSNSKRMSDILDIQRDHVSLINMAMRLLNPDGVL 654 Query: 653 MFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLIT 700 FS N R F+ L+ + K Q+IT +T+ QDF RN +IH+C+ I Sbjct: 655 YFSTNLRQFK--LEPMLKEKYAVQDITPQTIDQDFKRNSKIHHCFKIV 700 >UniRef50_UPI0000E10BA2 23S rRNA m(2)G2445 methyltransferase n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E10BA2 Length = 722 Score = 822 bits (2123), Expect = 0.0, Method: Composition-based stats. Identities = 305/721 (42%), Positives = 443/721 (61%), Gaps = 23/721 (3%) Query: 1 MNSLFASTARGLEELLKTELENLG-AVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIML 59 M+ + +T+RGL+ LL+ E++ L V ++ G V G+ Y+ + SRLA+R++ Sbjct: 1 MHQILVTTSRGLDALLQDEIQQLCPGVSTKLAPGMVKVSGELSDAYRICLHSRLANRVLW 60 Query: 60 PLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDA 119 L ++ LY I+W F+ F V F+G +I N+Q+GA+++KDAIVD Sbjct: 61 VLVHAPCANEQALYSAANNIDWPSHFSHEDDFMVQFNGTTKSINNTQFGALRIKDAIVDR 120 Query: 120 FTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAA 179 F L RPNV + AP V+ LH++ +I +DLSG LH R YR G AP+KE +A+ Sbjct: 121 FVEDGLMRPNVSKLAPKFVVHARLHRDEVTICIDLSGKSLHQRHYRQTTGDAPLKEHVAS 180 Query: 180 AIVMRSGW------------QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSG 227 A++ RSG+ L DPMCGSGT+ IEAA++A + AP + R +WGF+ Sbjct: 181 AMLYRSGFVERVKQNQASDVPQSLVLADPMCGSGTIAIEAALIAQNIAPAIAREQWGFNH 240 Query: 228 WAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFE 287 W H WQ+++ +A +A+ ++ Y +D D ++++ A+ NA AG+ I F Sbjct: 241 WKHHSAQQWQQIR-DAALQAQTPASDTHVAIYANDLDRKLVRSAKANADEAGVFGDIIFS 299 Query: 288 VKDVAQL---TNPLPKGPYG----TVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGW 340 D + T P G +++NPPYGERL L+ + G +K F W Sbjct: 300 QTDALKWSVDTQPQQAIETGELTHFIVTNPPYGERLGELATLLPMFVKWGEQLKAHFANW 359 Query: 341 NLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAM-VAEDYTNRL 399 ++S+ +++ +LL L+LR++K+Y NG L+C NY + ES + +D+ NRL Sbjct: 360 HVSMLTSNRELLRQLRLRSNKEYAMMNGKLECKCVNYQLNESNCTAVEQHSGQQDFANRL 419 Query: 400 RKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRL 459 +KNLK+ + + + +CYR+YDADLPEYN A+DRYADW+VVQEYAPPK I A KAR+RL Sbjct: 420 KKNLKRLKGFIQSNVTDCYRIYDADLPEYNCAIDRYADWLVVQEYAPPKDIPAEKARRRL 479 Query: 460 FDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLD 519 D++ + G++ +K+VLK RE+QKGK QY K + E + V E+ A +VNL DYLD Sbjct: 480 HDVLLQLPMLTGVSTDKIVLKVREQQKGKAQYDKFNSQHERIIVQEHGAQFYVNLHDYLD 539 Query: 520 TGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAER 579 TGLFLDHRI R+ Q +G LNLFSYTGS +VHA LG A S TTVDMS TYL+WA+ Sbjct: 540 TGLFLDHRITRQRFAQDVQGMRVLNLFSYTGSVSVHAALGKAASVTTVDMSNTYLDWAKD 599 Query: 580 NLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALM 639 N RLN L G + Q DCL+W++ ++Q++ IFIDPP+FSNSKRM +DVQRDH++L+ Sbjct: 600 NFRLNQLRG-GYDFQQGDCLSWIKHHSKQYERIFIDPPSFSNSKRMSKTWDVQRDHVSLI 658 Query: 640 KDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 +D L GG I FSNN R F++D + L +G ++IT T+ +D+ RN +IH+CW++ Sbjct: 659 RDALGCLTRGGKIYFSNNLRSFKLDTEALQDMGFAVEDITAATIPEDYIRNPKIHHCWIL 718 Query: 700 T 700 T Sbjct: 719 T 719 >UniRef50_Q6AQA5 Ribosomal RNA large subunit methyltransferase L n=1 Tax=Desulfotalea psychrophila RepID=RLML_DESPS Length = 722 Score = 816 bits (2108), Expect = 0.0, Method: Composition-based stats. Identities = 295/710 (41%), Positives = 424/710 (59%), Gaps = 18/710 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 + A+ A GLEEL++ E++ VE ++ +G V ++G Y++ +WSR +SRI+L L Sbjct: 14 YTFLANCALGLEELIEAEIKGFSGVEVELGKGTVQWQGSLETGYRACLWSRFSSRILLKL 73 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFS-GLNDTIRNSQYGAMKVKDAIVDAF 120 + +V S+ DLY +W + + TFA+ + + T+ +SQ+ A+++KD IVD F Sbjct: 74 SQFEVNSEDDLYQNSFTYDWHQHMSWKTTFAIDCTLSADATVGHSQFAALRIKDGIVDRF 133 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RP+V PD+R ++ + ++ LDLSG+ LH RGYR G+AP+KE LAA Sbjct: 134 KEDGDERPSVKTTQPDVRFHIHVSGNEGTLYLDLSGESLHKRGYRVAGGMAPLKENLAAG 193 Query: 181 IVMRSGWQPGT----PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 IV SGW L+DPMCG+GTLLIEAAM+ D APGL R +GF W QHD +W Sbjct: 194 IVALSGWPEKQEALPSLIDPMCGTGTLLIEAAMMFGDVAPGLARNYFGFLHWHQHDSQLW 253 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 Q + EA R GL + F G D+D V+ AR N AG+ E I + + L Sbjct: 254 QALLDEAVAREDAGLDKTWPSFQGYDADPVVVSSARKNIIRAGLDEFIQVKCSPLVHLGA 313 Query: 297 PLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQ 356 P + G ++ NPPYGERL + L++ GRI + F GW++++F ++PDL + Sbjct: 314 PTDR---GMLICNPPYGERLSETEKVRQLYAAFGRIGRKHFAGWDVAVFISNPDLAESFR 370 Query: 357 LRADKQYKAKNGPLDCVQKNYHVAESTPDS--------KPAMVAEDYTNRLRKNLKKFEK 408 + +K+Y+ NG + C AE +S + A + NR +KNLKK+ K Sbjct: 371 VSWEKKYRLFNGTIACRLSTGVFAEEEENSFAWEIQQVEVQEDALQFANRFKKNLKKYLK 430 Query: 409 WARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATIS 468 WA++E I C+R+YD DL E+N++VD Y W+ VQEY PPKTID A +R + A Sbjct: 431 WAKKENISCFRVYDRDLQEFNLSVDLYEKWIHVQEYLPPKTIDPDLASRRFNIALRAIRE 490 Query: 469 VLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRI 528 +LG+ +++ +K R+RQKG QYQ+ G++ + +V E N + VN DYLDTGLFLDHR Sbjct: 491 ILGLRSDRVFIKKRQRQKGAGQYQQQGDRKKMHQVREGNCYFLVNFRDYLDTGLFLDHRP 550 Query: 529 ARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTG 588 R +G+ S GK FLNL+ YTG+A+VHA GGA STTTVD+S TYL+W E N LNG Sbjct: 551 IRLRIGRESLGKKFLNLYGYTGTASVHAAQGGAASTTTVDLSSTYLQWTEMNFSLNGFAE 610 Query: 589 RAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRA 648 HR ++ADC+ WL E E +D IF+DPPTFSN+++ FD+QRDH+ L+ R L Sbjct: 611 NNHRTVKADCIKWLAEETELYDTIFVDPPTFSNTQKANRVFDIQRDHIQLLTLAMRRLSP 670 Query: 649 GGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWL 698 GG ++FS N R F +D ++IT++++ DF+RN +IH CW Sbjct: 671 GGLLIFSTNFRRFILDEK--LAEQFDVKDITRESIPLDFSRNEKIHFCWE 718 >UniRef50_A3JG83 Predicted methyltransferase n=1 Tax=Marinobacter sp. ELB17 RepID=A3JG83_9ALTE Length = 719 Score = 816 bits (2107), Expect = 0.0, Method: Composition-based stats. Identities = 303/707 (42%), Positives = 415/707 (58%), Gaps = 23/707 (3%) Query: 16 LKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLG 75 L EL+ G + GV +G Y++ +WSRLA+R++L + E SD +LY G Sbjct: 2 LADELDGFGLSLVRHAPAGVWVEGTLEGGYRACVWSRLANRVILHVAEVAATSDDELYDG 61 Query: 76 VQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAP 135 V ++W + +F V+F G N+ IRN+QYGA +VKD IVD FT RP V+ P Sbjct: 62 VVHLDWQQHIAVSGSFKVNFIGENEAIRNTQYGAQRVKDGIVDRFTANGGKRPAVEAKTP 121 Query: 136 DIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQP----GT 191 D+ V+ LH+ ++ +DLSG LH RGYR G AP+KE LAAA+++RSGW G Sbjct: 122 DVIVSARLHRGQLTLGIDLSGHSLHQRGYRAEQGQAPLKENLAAALLIRSGWPETVAAGG 181 Query: 192 PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 251 +DPMCGSGTLLIEAA++A D APG + +GF W HD +W ++ E + RA G Sbjct: 182 DFIDPMCGSGTLLIEAALMALDIAPGRRQDGFGFEKWLGHDAELWMSLRQEVERRAHAGK 241 Query: 252 AEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPP 311 G D D RV+ AR N + AG+ ++ + +L G V++NPP Sbjct: 242 QGRIPRIAGFDEDRRVLSTARNNLQRAGLDSIVELTEIPLQELELSGDWAEQGLVMTNPP 301 Query: 312 YGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLD 371 YGERL +L ++ LG +K W L +F+ +P+ + LR+ KQYK NG L Sbjct: 302 YGERLSERKSLAEIYQALGAAVKRVTPNWRLGVFTGAPEFGKSIGLRSFKQYKLFNGKLP 361 Query: 372 CVQKNYHVAEST--------------PDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIEC 417 + V E++ P A NRL+KN+K +WAR++ I C Sbjct: 362 AQLLLFTVDEASARIPKDPAAPGEILPRIANEERAAMLANRLKKNVKSIGQWARKQNISC 421 Query: 418 YRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKL 477 YRLYDAD+PEY +A+D Y DWV VQEY PKTID AR+RL + +A LGIA ++L Sbjct: 422 YRLYDADMPEYALAIDIYNDWVHVQEYMAPKTIDERAARERLSEALAVIPEALGIARDRL 481 Query: 478 VLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMS 537 V K R RQ G +QY+K GEF EV E+ L VNL DYLDTGLFLDHR R+ + Q + Sbjct: 482 VCKQRLRQTGTSQYEKQAASGEFFEVQEHGCTLKVNLKDYLDTGLFLDHRPLRQWIQQNA 541 Query: 538 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQAD 597 +GK FLNLF YTG+ATVHA GGA + ++DMS TY+ WA+ NL LN R H++ D Sbjct: 542 RGKRFLNLFCYTGAATVHAIAGGASRSLSLDMSHTYVSWAKDNLELNHADPRKHQVDAVD 601 Query: 598 CLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMF 654 CLAWL + +++FDLIF+DPPTFSNS +M D+Q+DH L++ + L G ++F Sbjct: 602 CLAWLASKPKPDQRFDLIFMDPPTFSNSAKMIGVLDIQKDHAKLIRQAMQRLTNDGLLVF 661 Query: 655 SNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 SNN R F++D + A+ +EI++ T+ +DF RN +IH CW I Sbjct: 662 SNNFRRFKLDDEVSAEFA--VEEISKSTIDKDFQRNPRIHRCWNIRH 706 >UniRef50_Q1YPL5 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YPL5_9GAMM Length = 705 Score = 814 bits (2104), Expect = 0.0, Method: Composition-based stats. Identities = 306/703 (43%), Positives = 413/703 (58%), Gaps = 21/703 (2%) Query: 16 LKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLG 75 L EL LGA + VHF G L Y++ +WSRLA+R+++PL + + LY Sbjct: 2 LAQELLALGAESTKETVAAVHFVGTRELAYRACLWSRLANRVLMPLHNFSLDEEDQLYQE 61 Query: 76 VQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAP 135 I W E F+ T A+ F G + + N+ YG+ +VKDA+VD R+ RPNVD P Sbjct: 62 CLDIPWEEHFSHEQTIAIDFIGTSRLVDNTMYGSQRVKDAVVDRIRREEGERPNVDTKNP 121 Query: 136 DIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGW----QPGT 191 DIR+ V HK +++LD+SG+ LH RGYR G APIKE LAAA++MR W + G Sbjct: 122 DIRIQVRQHKGQVTVSLDISGESLHRRGYRSGQGSAPIKENLAAALLMRCKWPEMMKNGA 181 Query: 192 PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 251 LLDPMCGS TL+IE AM+A D APGL R R+GF+ W QHD+ +WQ + EA+ R GL Sbjct: 182 ALLDPMCGSATLIIEGAMMAADIAPGLLRERYGFTDWKQHDQELWQSILDEAEQRKGAGL 241 Query: 252 AEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPP 311 F G D++ RV++ A N AG+ E I K + Q YG +L+NPP Sbjct: 242 EALDLDFRGYDANPRVLEFATLNIEKAGLDEHIRLAHKPIDQFGKA--TADYGLLLTNPP 299 Query: 312 YGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLD 371 YGERL L+ ++ LG +++ F GW ++F+ + +L L KQY+ NG + Sbjct: 300 YGERLGDLDGLVPVYQKLGAVLQKNFQGWKAAVFTGNVELGRETDLTPTKQYQLFNGTIP 359 Query: 372 CVQKNY------------HVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYR 419 C + + + P + A+ NRL KN +K W + G+ CYR Sbjct: 360 CKLLVFEDLTSRSEKIEQRLNKPAPAQELTEGAKMVFNRLVKNQRKLNGWLNKTGVSCYR 419 Query: 420 LYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVL 479 +YDAD+PEY+VAVD Y D V VQEY PP TID AR+R ++ A A + Sbjct: 420 VYDADIPEYSVAVDIYEDSVHVQEYLPPNTIDDKVARERFAEVKQAVKEFAKDARGHIHY 479 Query: 480 KTRERQKGKNQYQKLGEKG-EFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSK 538 K R RQKG +QY++ E + + V E NA NL+DYLDTGLFLDHR RRM+ +++K Sbjct: 480 KERRRQKGDSQYERFNEGPSDTITVFEGNAQFEANLSDYLDTGLFLDHRPVRRMVSELAK 539 Query: 539 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADC 598 GK LNLF YT + +V A LGGA+ T ++DMS TYL+WA+RN LN ++ + H L++ADC Sbjct: 540 GKSLLNLFCYTAAVSVQAALGGAKRTLSIDMSNTYLDWAQRNYDLNNISAKNHHLLRADC 599 Query: 599 LAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 658 L WL EQFD+IF+DPPTFSNSK+M+ DVQRDH L+++ L G ++FSNN Sbjct: 600 LKWLETDGEQFDVIFLDPPTFSNSKKMDSILDVQRDHGDLIRNSMAKLAPDGVLIFSNNF 659 Query: 659 RGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 R F+MD L A+ IT +TL DF RN +IHN W IT Sbjct: 660 RKFKMDE--LVARQFNAENITPQTLDMDFERNPRIHNVWRITR 700 >UniRef50_C7RA96 Putative RNA methylase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RA96_KANKD Length = 718 Score = 812 bits (2098), Expect = 0.0, Method: Composition-based stats. Identities = 305/719 (42%), Positives = 421/719 (58%), Gaps = 24/719 (3%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +AS +G+E LL EL +LGA + + F+GD L Y++ + SRLA+RI L L Sbjct: 2 QFYASCPKGVEALLIDELTSLGATNLKEHPSHIVFEGDLELAYKACLHSRLANRIYLCLL 61 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHF-SGLNDTIRNSQYGAMKVKDAIVDAFT 121 + + S D+Y V I W+ F+ TF V + ND +R+S + A KVKDA+VD + Sbjct: 62 DEEFTSVDDMYQKVNGIEWSWHFDMQQTFVVDAIARKNDDVRHSGFAAQKVKDAVVDYYQ 121 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 + RP++D+D PD R++ ++ I +DL+G LH RGYR +G APIKE LAAA+ Sbjct: 122 ERFEQRPSIDKDNPDYRIHAIINGRQLKIGIDLAGRSLHQRGYRPISGRAPIKENLAAAL 181 Query: 182 VMRSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 ++R+GW + G DPMCG+GT+L+EA M+A D APGL + F W QHD +WQ Sbjct: 182 LIRAGWPELSKQGYSFHDPMCGTGTILVEAVMIACDMAPGLFNPTYSFENWKQHDAELWQ 241 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 A A+ + K ++ F GSDS + ++ A+ AG ELI +D+ + Sbjct: 242 TTIASARRQFNKNKLALNNRFIGSDSHRKSLELAKEVILNAGFDELIEVSQQDIRRPKLE 301 Query: 298 LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 K P G +LSNPPY ERL E +I L+ G +K+ GW ++ + + + Sbjct: 302 AFKEP-GLLLSNPPYAERLGEEDEVIQLYRDFGDYIKSHCIGWQAAIITNEVSFAKAMGM 360 Query: 358 RADKQYKAKNGPLDCVQKNYHVAEST--PDSKPAMVAEDY-----------TNRLRKNLK 404 R+ KQYK KNG +DC + V E P +V D+ NR+ KN + Sbjct: 361 RSHKQYKFKNGAIDCQLYLFDVKEENFYKPFDPTVVNPDWDKNLSEGAVMLKNRMIKNQQ 420 Query: 405 KFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIA 464 + + + +Q + CYRLYDADLPEY+ A+D Y D V +QEYAPPK I A++RL +I+ Sbjct: 421 RLKSYLKQNDVTCYRLYDADLPEYSAAIDVYDDMVHIQEYAPPKDIPPKVAQRRLNEIVR 480 Query: 465 ATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFL 524 T +L I +++ LK R+RQKG +QYQK E+ +F V E +VNL YLDTGLFL Sbjct: 481 VTSGLLQIPESEIALKQRQRQKGDSQYQKHSEEEQFQVVHEQGLQFYVNLNRYLDTGLFL 540 Query: 525 DHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLN 584 DHR R+M+ + GK FLNLF+YTGS +V+A GGA+ TTTVDMSRTYL WA +N LN Sbjct: 541 DHRKTRKMIMAEANGKRFLNLFAYTGSVSVYAAKGGAK-TTTVDMSRTYLNWAVKNFGLN 599 Query: 585 GLTGRAHRLIQADCLAWLREA--NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDL 642 + H +Q+DCL WL EA +DLIF+DPPTFSNSKRM+ FDVQRD + L+ Sbjct: 600 SIPIYGHEFVQSDCLQWLDEAQGQRTYDLIFLDPPTFSNSKRMDVTFDVQRDQVELINQT 659 Query: 643 KRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 LL G + FSNN + F M+ + K QEIT +TL DF ++R H CWLI Sbjct: 660 MNLLDKKGKLYFSNNFKKFEMETE--LKEHFDVQEITARTLPSDFQKSRNHHRCWLIQH 716 >UniRef50_A0L8B5 Ribosomal RNA large subunit methyltransferase L n=1 Tax=Magnetococcus sp. MC-1 RepID=RLML_MAGSM Length = 722 Score = 812 bits (2098), Expect = 0.0, Method: Composition-based stats. Identities = 306/725 (42%), Positives = 420/725 (57%), Gaps = 26/725 (3%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M FA+TARGLE L EL+ +GA + GV F+GD + ++ +WSR+A+RI+L Sbjct: 1 MYRYFATTARGLEPALAAELKRMGAKSVRPASAGVGFEGDLEIGLRACLWSRVATRIILS 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L + V + LY V I W + + T +V G NDTIR++ +G K+KDA+VD Sbjct: 61 LKKIDVSTPEALYASVLEIPWEDHLDAEGTLSVDCIGTNDTIRHTNFGGQKLKDAVVDRI 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 K RP+V R+ PD+R+N+ + + +DLSG+GLH RGYR R G AP+KE LAAA Sbjct: 121 RDKKGSRPSVARERPDLRINLGIRGNEGRVGIDLSGEGLHRRGYRLRTGDAPLKENLAAA 180 Query: 181 IVMRSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHD--EA 234 ++ +GW+ G P +DPMCGSGTL IEAAM+A D APG R +GF W Sbjct: 181 LLYFAGWEEQARLGAPFVDPMCGSGTLPIEAAMMAGDIAPGSLRRYFGFRRWRGASGIAE 240 Query: 235 IWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQL 294 +WQ + E+ R + DSDA ++ A+ N A + I +DVA Sbjct: 241 LWQRLADESIERQNQAKMPI---IEAGDSDANMVHIAQANIEEAELEGHIRLHQRDVAAW 297 Query: 295 TNPLPKGP-YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLS 353 G +++NPPYGERL L L + LG ++ GW + S Sbjct: 298 QKGADWPDRPGVLVTNPPYGERLGEVVELKGLFAKLGMLLNGPLLGWRSGVLMGDVLWQS 357 Query: 354 CLQLRAD-KQYKAKNGPLDCVQ------KNYHVAESTPDSKP--------AMVAEDYTNR 398 + L ++ NGP+ C A+ P KP A+ + NR Sbjct: 358 AMGLPQQGQRMDLNNGPIPCAYILHGTEPKPQAAKGAPAPKPGLQQGVVSPENAQMFANR 417 Query: 399 LRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQR 458 L+KN K+ +KW +E + CYRLYDAD+PEY +AVDRY +WVVVQEY P +I A +R Sbjct: 418 LKKNQKRLKKWVTRENVRCYRLYDADMPEYALAVDRYEEWVVVQEYQAPSSIPDADAHRR 477 Query: 459 LFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYL 518 L D + VLG+ P ++V+K R+RQKG NQY K+ +G+ + V E + VNLTDYL Sbjct: 478 LQDACSVLPEVLGVPPERVVVKQRKRQKGYNQYDKMANRGQKVLVAEQGLNFEVNLTDYL 537 Query: 519 DTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAE 578 DTGLF DH RR + Q + + FLNLF YTG+ATVHA GGA +TT+VD+S TYLEWA+ Sbjct: 538 DTGLFPDHAPMRRRIQQEAANRRFLNLFCYTGTATVHAAAGGALTTTSVDLSNTYLEWAQ 597 Query: 579 RNLRLNGLTGR-AHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLA 637 RN+ LNG G HR I+A+C+ W+ ++ FDLIF+DPPTFSNSK M ++FD+QRD + Sbjct: 598 RNMELNGFKGEHQHRFIKANCMQWIATTDQTFDLIFLDPPTFSNSKSMLESFDIQRDQVT 657 Query: 638 LMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCW 697 L+ + RLL G + FS N++ F+++ D L+ L +EITQ+TL DF R IH CW Sbjct: 658 LIGGVARLLNPDGVLYFSTNRKKFKLEQDLLSAQNLHMEEITQQTLDPDFHREPPIHRCW 717 Query: 698 LITAA 702 IT A Sbjct: 718 RITCA 722 >UniRef50_Q2SCH1 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Proteobacteria RepID=RLML_HAHCH Length = 717 Score = 795 bits (2053), Expect = 0.0, Method: Composition-based stats. Identities = 303/720 (42%), Positives = 422/720 (58%), Gaps = 22/720 (3%) Query: 1 MNSL--FASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIM 58 MN FAS +GLE +L EL+ LGA + GV K D Y+ + SRLA+R++ Sbjct: 1 MNEFSLFASCPKGLEYVLADELKTLGAEVLRTNPAGVEAKVDLAGAYRICLGSRLANRVL 60 Query: 59 LPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVD 118 L + + LY +NW+E PG ++ + G + IR+S++GA VKDAI D Sbjct: 61 RLLQSTRTATRDGLYQAASEVNWSEHLRPGESYWIAAFGSSGDIRHSRFGAQVVKDAIND 120 Query: 119 AFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLA 178 F ++L P +D+ + V + L K T ++ LDL+G LH RGYR AP+KE LA Sbjct: 121 HFRDRDLELPVIDKRSGVQTVQLNLAK-TITLGLDLAGRSLHQRGYRQEGAAAPLKENLA 179 Query: 179 AAIVMRSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEA 234 AAI+ R+GW +DPMCGSGTL++EAAM+A + APGL + F HD Sbjct: 180 AAILYRAGWPEICGEDGCFVDPMCGSGTLVVEAAMIAMNIAPGLLNPHFLFEKAPWHDPE 239 Query: 235 IWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQL 294 +W+ V EA +A G + +G D + I+ A+ N AG+ + E Sbjct: 240 VWRGVYEEAMEKAVLGKRRWRGAIFGCDLNPAAIRTAKRNLSRAGLDRWVKLETASAMDF 299 Query: 295 TNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSC 354 T ++ NPPYGERL E L +L+ LGR +K +G W +F++S +L Sbjct: 300 TPDTEGCGQRLLVCNPPYGERLGQELELRSLYRALGRRLKTAYGEWKAGIFTSSVNLAKE 359 Query: 355 LQLRADKQYKAKNGPLDCVQKNYHVAESTPD------------SKPAMVAEDYTNRLRKN 402 + LRADKQY NGPL + V + P+ + A+ + NRL KN Sbjct: 360 IGLRADKQYHLYNGPLATTLYLFDVYGNRPEAETPRKPQNASLEGISEQAQMFRNRLSKN 419 Query: 403 LKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDI 462 L K+ KWA+++ + YR+YDAD+PEY VA+D Y ++VQEYAPPK++D KARQRL D+ Sbjct: 420 LAKWSKWAKKQQLSAYRIYDADMPEYAVAIDWYDGGIIVQEYAPPKSVDEEKARQRLLDV 479 Query: 463 IAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGL 522 + T +VLGI +L LK R++QKG QY+K + V E+ WVNL+DYLD+GL Sbjct: 480 LEVTPAVLGIDGGQLFLKQRKKQKGMLQYEKTDSSRKERTVEEHGCRFWVNLSDYLDSGL 539 Query: 523 FLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLR 582 FLDHR R + + S GK FLNLF YTG+A+VHA GGA +TT+VDMS+TYL WAERN Sbjct: 540 FLDHRPTRYWIQKHSSGKRFLNLFCYTGAASVHAAAGGAATTTSVDMSQTYLSWAERNFH 599 Query: 583 LNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDL 642 LN L+G HR ++A+ L WL+ + +DLIF+DPPTFSNSK+MED D+QRDH L++D Sbjct: 600 LNKLSG-PHRFVRANVLDWLKAEHNSYDLIFLDPPTFSNSKKMEDVLDIQRDHAGLIEDC 658 Query: 643 KRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITAA 702 RLL GG ++FS N R F++D G+ + + T ++ +DF RN +IH CW I + Sbjct: 659 MRLLAPGGVLIFSCNYRRFKLD-SGIEQR-FAVENHTAASIPEDFKRNERIHQCWHIRHS 716 >UniRef50_Q31IC8 Ribosomal RNA large subunit methyltransferase L n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=RLML_THICR Length = 734 Score = 794 bits (2051), Expect = 0.0, Method: Composition-based stats. Identities = 287/736 (38%), Positives = 428/736 (58%), Gaps = 38/736 (5%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M FA+ +GL ELL+ EL GA + G F GD + Y+S +WSRLA+RI L Sbjct: 1 MCRFFATAPKGLNELLREELTTFGAENIKTQPTGATFDGDLEVGYRSCLWSRLANRIYLV 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L E ++ + L VQ+I+W++ + TFAV FSG I +S YGA+K+KD IVD F Sbjct: 61 LLETELPNQEALSSVVQSIDWSKHIDKEGTFAVSFSGQGLGITHSHYGALKIKDGIVDYF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDR-AGIAPIKETLAA 179 RP++D + PDIRV+ L++ +++LDLSG LH RGYR+ AP+KE +AA Sbjct: 121 REHYQVRPSIDTEVPDIRVHGHLNRNQLTLSLDLSGYSLHQRGYREGIQVEAPLKENVAA 180 Query: 180 AIVMRSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRG-RWGFSGWAQHDEA 234 AI+MR+ W Q G DPMCGSGT L+EAA++A+D APG+ + + W HDE+ Sbjct: 181 AILMRANWPEIAQQGGAFYDPMCGSGTFLVEAALMASDTAPGVAKSGEMLLNYWLGHDES 240 Query: 235 IWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQL 294 +WQ++ EA+ R + GL ++ + YGSD + + AR + + AG ++I + V Q Sbjct: 241 LWQKLVEEAEQREQVGL-KHLPNIYGSDISHKSLDVARNSIQAAGYDDVIEIKQMAVEQG 299 Query: 295 TNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSC 354 P G ++ NPPYGERL E + ++ LG +K +F W ++ + +L Sbjct: 300 RKWGDWSP-GLIVCNPPYGERLGEEETVKQIYLKLGEYLKAEFIHWKAAILTCHTELGMF 358 Query: 355 LQLRADKQYKAKNGPLDCVQKNYHVAES--------------------TPDSKPAMVAED 394 L ++A + + NG + C + + E PD A+ Sbjct: 359 LGIKAKRSHDFFNGAMSCRLFRFEIEEEWFRQPALQPKQDLAEQVLQLQPDLADTDNAKM 418 Query: 395 YTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD-----WVVVQEYAPPKT 449 +NR+RKN+K + W +Q I YR+YDAD+PEY +A+D Y WVVV EYAPPKT Sbjct: 419 VSNRIRKNMKGLKSWVKQNDISAYRVYDADIPEYALAIDLYDTLESGLWVVVAEYAPPKT 478 Query: 450 IDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAH 509 ++ KA++RL++ ++ SV ++P ++V K R +QKG++QY++L E+ F + E Sbjct: 479 VNPTKAKRRLYEAMSVLPSVFNVSPERIVFKVRSQQKGQDQYERLDEQKAFFTIVENQTR 538 Query: 510 LWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDM 569 L VN TDYLDTG+FLDHR R+ + +++ GK LNLF YT +AT A G +S+ ++DM Sbjct: 539 LRVNFTDYLDTGIFLDHRQVRQEVAKLAAGKRLLNLFCYTATATAEAVKAGCKSSLSLDM 598 Query: 570 SRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA----NEQFDLIFIDPPTFSNSKRM 625 S+TYL WA+ N N + + H L Q + L WL A + FD+IF+DPP+FS SKRM Sbjct: 599 SKTYLYWAKHNFMCNDINEKQHVLQQENVLEWLETATQNPKDLFDVIFLDPPSFSTSKRM 658 Query: 626 EDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQ 685 + D+QRDH+ L++ +LL G ++FS N R F++D + + ITQ+T+ + Sbjct: 659 DGTLDIQRDHVDLIQKTLKLLSKDGKLIFSTNLRKFKLDKASFEP-DYQIENITQRTMPK 717 Query: 686 DFARNRQIHNCWLITA 701 D+ARN +IH WL + Sbjct: 718 DYARNMKIHQAWLFSR 733 >UniRef50_Q21JW7 Ribosomal RNA large subunit methyltransferase L n=3 Tax=cellular organisms RepID=RLML_SACD2 Length = 752 Score = 787 bits (2034), Expect = 0.0, Method: Composition-based stats. Identities = 306/743 (41%), Positives = 423/743 (56%), Gaps = 45/743 (6%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 LF S ++G E LL+TELE L + + GV+ +Y+ +W+RLA++++LPL Sbjct: 12 YDLFVSCSQGWEGLLQTELEQLAVGDVKPGHAGVYVSATLEQMYKICLWTRLATKVLLPL 71 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 + + D++ ++W + PGA+ V F G ND +RN+Q+GA +VKDA+VD+ Sbjct: 72 DSGPIETGDDVHTVASKVDWPSLMKPGASLKVDFIGTNDAVRNTQFGAQRVKDAVVDSIR 131 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 RPNV++ PD+R++ LH++ I++DLSGD LH RGYR + G AP+KE LAAA+ Sbjct: 132 HAGGERPNVEKMQPDVRIHARLHRDELHISIDLSGDSLHRRGYRQKQGGAPLKENLAAAL 191 Query: 182 VMRSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 ++R+GW + G LLDPMCGSGTLLIE A++A APGL R ++GF W H+ W Sbjct: 192 LLRAGWPTIAEQGGALLDPMCGSGTLLIEGALIAYSIAPGLSRDKFGFECWTGHNADTWA 251 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 +V +A+ K L E S +G DSD V + A N G+ +I K V +L P Sbjct: 252 QVVNDAKAIRDKNLQEKSFDIFGYDSDYYVTKAAEMNCEALGLQNVIHIANKPVEELKQP 311 Query: 298 LPKG-PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQ 356 K G V+ NPPYGERL L + +L +K QF GW ++F+++P+L + Sbjct: 312 THKVLVPGLVIVNPPYGERLGEVNELRTTYQILAHQVKQQFEGWTFAVFTSNPELAKETR 371 Query: 357 LRADKQYKAKNGPLDCVQKNYH---------------------------------VAEST 383 LRA+K+ K KNG L Y V ++ Sbjct: 372 LRANKKNKFKNGALPAELFVYSVLSADDAKLRKDKLTQAVQTDEDGQVENASGAWVRKNL 431 Query: 384 PDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQE 443 D A NR++KNLK+ +K +Q YR+YDAD+PEY+ A+D Y D V +QE Sbjct: 432 CDKPLTEAATMVANRIKKNLKRLKKSVKQNDWHGYRVYDADMPEYSAAIDLYNDQVHIQE 491 Query: 444 YAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEF--- 500 YA PKTIDA KA R + L NKL +KTR+R KGK QY+K + F Sbjct: 492 YAAPKTIDADKAEARFETLKHGAAVALQAPDNKLFVKTRKRNKGKAQYEKQTDTQGFDAE 551 Query: 501 --LEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGL 558 ++V E NA LWVNL DYLDTGLFLDHR R + + + GK FLNLF YT +A+V A L Sbjct: 552 RCIQVQEGNAKLWVNLQDYLDTGLFLDHRPLRMRIHKEATGKRFLNLFCYTATASVQAAL 611 Query: 559 GGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPT 618 GGA + +VDMS TYLEWA+ N RLN + HRL++ADC WL + E FDLI +DPPT Sbjct: 612 GGATESVSVDMSNTYLEWADNNFRLNNVHLARHRLVRADCFDWLNKCREGFDLIMLDPPT 671 Query: 619 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEI 678 FSNSK+M D D+Q+D + L+ +L GGT+ FS N R F++D + + I Sbjct: 672 FSNSKKMSDVLDIQKDQVRLISRCMDILNPGGTLYFSTNFRQFKLDEQISTR--YVVENI 729 Query: 679 TQKTLSQDFARNRQIHNCWLITA 701 + T+ +DF N +IH CW I Sbjct: 730 SAATIDEDFKGNPKIHYCWKIQH 752 >UniRef50_A5EX48 Ribosomal RNA large subunit methyltransferase L n=1 Tax=Dichelobacter nodosus VCS1703A RepID=RLML_DICNV Length = 729 Score = 786 bits (2030), Expect = 0.0, Method: Composition-based stats. Identities = 316/720 (43%), Positives = 422/720 (58%), Gaps = 24/720 (3%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + S A+G E++L+ E E LG + V K Y+ +WSR ASR++L Sbjct: 5 LFSCVLPCAKGSEQVLQQEAEQLGVQTLSIAPAVVRGKASLLTFYRLCLWSRTASRVLLV 64 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L V S +Y + I W + P TFAV F+GL IRN+Q+GA+K+KDA+VD Sbjct: 65 LAHENVDSAEAIYEVARNIAWEDHIAPDDTFAVRFNGLGCGIRNTQFGALKIKDAVVDRL 124 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RP+VD PDI ++ LHK ++ALDLSG LH RGYR G AP+KETLAA Sbjct: 125 RDIVKRRPDVDAKTPDILLDAHLHKNELTLALDLSGGSLHERGYRQAHGAAPMKETLAAT 184 Query: 181 IVMRSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 ++ R+ W L+DP CG+GTL++EAAM+A D AP L R WGF+ W H A+W Sbjct: 185 LLYRARWHEFCAQPATLIDPTCGAGTLVLEAAMMAADYAPNLQRQHWGFTRWQNHRPALW 244 Query: 237 QEVKAEAQTRARKGLAEYSSH-FYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLT 295 +V EAQTR G+A S + FYG D + VI AR NA+ G+ + + F K + LT Sbjct: 245 NKVIDEAQTRKNAGIAALSDYVFYGYDQNPVVIAAARANAKRLGLEDFVHFAPKRLEDLT 304 Query: 296 NPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCL 355 G G V++NPPYGERL LI ++ LG K W +++ +++ LL + Sbjct: 305 ADF--GARGFVVANPPYGERLGEVQELIPTYAALGHWFKTLPADWEMAVIASNDALLKRM 362 Query: 356 QLRADKQYKAKNGPLDCVQKNYHVAES-------------TPDSKPAMVAEDYTNRLRKN 402 +LRA K Y+A NG + +Y +E + A+ + NRL+KN Sbjct: 363 RLRAHKYYQAFNGTIAAQIVHYRRSEQPESQETAAQQKLAQASVGISEQAQMFANRLQKN 422 Query: 403 LKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDI 462 ++K A + + YR+YD D+PEY VA+D Y D VV+QEYAPPKTID KA+QRLFD+ Sbjct: 423 IQKIRPSAERAQTDAYRIYDQDMPEYAVAIDCYGDAVVIQEYAPPKTIDPQKAQQRLFDV 482 Query: 463 IAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEK-GEFLEVTEYNAHLWVNLTDYLDTG 521 + VL + + LKTR+RQ GK QY EK E V E A VNL+DYLDTG Sbjct: 483 LQVVPEVLALDERSVFLKTRQRQTGKTQYNPAAEKRNEERIVYEGAARFLVNLSDYLDTG 542 Query: 522 LFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNL 581 LFLDHR RR+L + + GK LNLF YT +A+V A LGGA TT+VD+S TYL+WA+RN Sbjct: 543 LFLDHRPMRRLLFEQAAGKRVLNLFCYTATASVQAALGGASYTTSVDLSPTYLDWAQRNF 602 Query: 582 RLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKD 641 LN L+ R HRL +AD +AWL QFD+IF DPPTFSN+K+ + FDVQRD +AL+ Sbjct: 603 DLNALSDR-HRLQRADVMAWLHSGKSQFDMIFCDPPTFSNTKKEQRVFDVQRDQIALIDG 661 Query: 642 LKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 + L AGG + FSNN RGFR++ A+ QEI++ T+ DF R +IH W I Sbjct: 662 CMQRLAAGGILYFSNNYRGFRLEEALCAR--YCVQEISENTIDFDFKRRPKIHRVWKIMH 719 >UniRef50_A4BHH9 Putative uncharacterized protein n=5 Tax=Proteobacteria RepID=A4BHH9_9GAMM Length = 713 Score = 784 bits (2025), Expect = 0.0, Method: Composition-based stats. Identities = 296/707 (41%), Positives = 410/707 (57%), Gaps = 12/707 (1%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 + + +G+ LLK E+ L GV F G + Y+ +WSRLA+R+ LG Sbjct: 8 RFWVTCPQGVHGLLKQEIATLTDASVGDWHKGVEFTGSLKDAYRVCLWSRLANRVYAALG 67 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 E S L V ++NW E P T V F+G IR++++GA KVKD +VD Sbjct: 68 ESHEVSFDALQALVSSVNWDEHLRPSGTLKVVFTGRLPEIRDTRFGAQKVKDWVVDQIRE 127 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 ++ RPNVD PD+ + + ++ + ++L+G+ LH RGYR G APIKE LAAAI+ Sbjct: 128 RHGVRPNVDPQNPDLTIFAQVARKKLFLGIELTGESLHRRGYRQATGPAPIKENLAAAIL 187 Query: 183 MRSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 + S W + G LD MCGSGTL+ EAAM+A D APGL R ++GF W QH W+E Sbjct: 188 LASDWPARAKRGESFLDLMCGSGTLVTEAAMIAADYAPGLGRTQFGFERWLQHSVNDWRE 247 Query: 239 VKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 + EA+ R G E G D+D VI A G+ + + +A+ T P Sbjct: 248 LLGEARERREAG-RETMPVVLGYDADGGVIASANATLEKLGLEKQARCYHRSLAEWTLPT 306 Query: 299 PKG-PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 G +SNPPYGERL +P L+ + +G I + Q GW L + ++ L + Sbjct: 307 HWALTPGLWVSNPPYGERLGDKPTLLRTYRRIGEIAREQLNGWELGMLTSDDILAREIGF 366 Query: 358 RADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAE--DYTNRLRKNLKKFEKWARQEGI 415 + + + NGP++ +HV E+ S PA + + NRL KN K+ +KW +E + Sbjct: 367 KPHDKRRLFNGPIETTYYQFHVDEAQKASAPANNEQVEAFRNRLLKNRKQLKKWVNRENL 426 Query: 416 ECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPN 475 E YRLYDAD+PE+ +A+D Y + VQEYAPPKT+ HKA+QRL + A V+ + + Sbjct: 427 EAYRLYDADIPEFALAIDVYGQALHVQEYAPPKTVPEHKAQQRLLQAVDALSDVMELPVS 486 Query: 476 KLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQ 535 K+ +K RERQKG QY+K + E VTEY L VNL DYLDTGLFLDHR R+ + + Sbjct: 487 KIAVKRRERQKGTRQYEKNDARNESFTVTEYGVTLKVNLHDYLDTGLFLDHRNMRKKVQE 546 Query: 536 MSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLN-GLTGRAHRLI 594 ++GK LNLF YTG+ T HA GGA STT+VD+S+TYL WA+ NL+LN G G HR I Sbjct: 547 TARGKRVLNLFCYTGAFTAHAYAGGAASTTSVDLSKTYLAWAKDNLQLNGGKAGPNHRFI 606 Query: 595 QADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMF 654 +DCL WL E+ + FDLI +DPPTFSNS RM+D DVQRDH L+ +LL G ++F Sbjct: 607 HSDCLQWLSESKDTFDLIIMDPPTFSNSARMKDTLDVQRDHEFLVDHAMKLLSPDGVLIF 666 Query: 655 SNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 SNN R F +D D L + Q++T +++ +DF R+R H C+ I Sbjct: 667 SNNYRKFYLD-DRLYE-AYAVQDVTGQSVPKDFTRSRP-HRCFEIRH 710 >UniRef50_Q5QX63 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Idiomarina RepID=RLML_IDILO Length = 704 Score = 782 bits (2020), Expect = 0.0, Method: Composition-based stats. Identities = 306/709 (43%), Positives = 444/709 (62%), Gaps = 12/709 (1%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M F + ++GLE LL EL+ + G + + D + Y MWSRLASR++L Sbjct: 1 MYRFFIACSKGLEGLLFDELQEFNLSHVKQTLAGCYIEADLQQAYTVAMWSRLASRMLLQ 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 LGE +V S ++ L + +W+++F+ TF V FSG ND IR++Q+GA VKD IVD F Sbjct: 61 LGEKEVSSLDEIKLALTQFSWSKVFDANRTFVVDFSGGNDDIRHTQFGAQLVKDCIVDNF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RP++D+ PDIR+ V +HK+ + +LD +GDG+H RGYR + G AP++ETLAAA Sbjct: 121 RNSGFERPSIDKQDPDIRIAVRVHKDKLTWSLDFTGDGMHKRGYRLQQGEAPLRETLAAA 180 Query: 181 IVMRSGWQPG-----TPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAI 235 I++R+G + + DP CGSGTL+IEAAM+A D APGL R WGF W +H + Sbjct: 181 ILVRAGIKNELEKDEPVIFDPFCGSGTLVIEAAMMAMDHAPGLSRAHWGFLFWHEHSPQL 240 Query: 236 WQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLT 295 W +V +A+ R ++G + H GSD++ ++ +A+ NA+ + E+I FEV D Sbjct: 241 WHDVLEQAEQRFKEGKKNFKGHLKGSDNNPHLVAKAKDNAKRVLLHEVIEFEVADATNCE 300 Query: 296 NPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCL 355 P G ++ NPPYGERL + L+ GR +K+ F W++++ + LL L Sbjct: 301 AP---AESGLLVCNPPYGERLGEAVETLLLYRRFGRQLKDTFQNWHIAVLAGDEQLLKRL 357 Query: 356 QLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGI 415 +LR+ K+Y NG + Y + + PD + A+D NR++KN K KWA +EG+ Sbjct: 358 KLRSHKKYPLLNGAIPVNLALYDLTKEQPDFAESQ-ADDLVNRVKKNHAKLSKWANKEGL 416 Query: 416 ECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPN 475 +C+R+YDAD+PEYN A+D Y D+VVVQEYA PK I A RL+ ++ + S L ++ + Sbjct: 417 DCWRVYDADIPEYNAAIDIYQDYVVVQEYAAPKDIPEGVANDRLWFMLESLSSALPVSED 476 Query: 476 KLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQ 535 K++LK R+RQ GK QY++ + L V EY A VNLTDYLDTGLF+DHR+ R+ L Sbjct: 477 KIILKRRQRQSGKQQYERQSQDSTVLTVNEYGAKFEVNLTDYLDTGLFMDHRLVRKELLD 536 Query: 536 MSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQ 595 + D LNLF+YT +A+V A GA +VDMS+TYL+W ERN LN L G ++ IQ Sbjct: 537 KCEELDVLNLFAYTCTASVQAARAGAARVVSVDMSKTYLKWGERNFALNRLRGD-YQFIQ 595 Query: 596 ADCLAWLREANEQ--FDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIM 653 ADC W+RE + FD+IF+DPPTFSNSKRM D+QRDH+ L+K +L+ G I+ Sbjct: 596 ADCFIWMREQRGKQLFDVIFLDPPTFSNSKRMSGTLDIQRDHVGLIKTATGMLKEDGVIL 655 Query: 654 FSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITAA 702 FSNN++ FR+D +GL K GL+ + TQ ++ +DF R++ IH+ ++I+ A Sbjct: 656 FSNNRKKFRIDTEGLDKAGLEVNDQTQASIPEDFKRHKGIHHYYIISRA 704 >UniRef50_Q3IGZ3 Ribosomal RNA large subunit methyltransferase L n=3 Tax=Alteromonadales RepID=RLML_PSEHT Length = 705 Score = 778 bits (2009), Expect = 0.0, Method: Composition-based stats. Identities = 314/709 (44%), Positives = 428/709 (60%), Gaps = 16/709 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 A T+ G+E LL EL LGA + G V F+ D+ L + + +R A+R+++ + Sbjct: 2 QFIALTSIGIENLLVDELTELGATVSKQTVGSVRFEADSLLAQKVCLSTRFATRVLMLIE 61 Query: 63 ECK-VYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 E + V LY ++ W E F P TFAV F+G ND+++N+Q+ + +KDAIVD F Sbjct: 62 EKEGVDDKNSLYNFARSQPWQEWFGPTQTFAVDFNGTNDSLKNTQFSGLVIKDAIVDYFN 121 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 RPNVD+ ++RV L++ S+ +D SG L RGYR G APIKE LAAA+ Sbjct: 122 DLFEQRPNVDKQDANVRVVARLNRYGVSMYIDYSGPRLSERGYRQGQGKAPIKEHLAAAL 181 Query: 182 VMRSGW--QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 + RSGW PL DP CG+GT+LIEAA +A + APGL R + F A ++E+ Sbjct: 182 IKRSGWLENVNQPLFDPCCGAGTILIEAAGMARNEAPGLFREGFAFERLPSFRAAKFKEL 241 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 K E + + G D DA+V+ +A NA+ A + ++I F+ D +LT Sbjct: 242 KEEL----LGNIIDPKLWLIGHDYDAQVLGKAIDNAKRAELDDIIKFKQSDATKLTAVA- 296 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 G V+SN PYGER+ S L+ LH LG K F W L+L L L+L Sbjct: 297 -KLPGVVISNLPYGERIGSMAELVDLHRNLGVGFKKHFNHWKLALLGMDESLFKLLKLVR 355 Query: 360 DKQYKAKNGPLDCVQKNYHVAEST-------PDSKPAMVAEDYTNRLRKNLKKFEKWARQ 412 K+YK KNGPLD Y + + + + + NRL+KN + + W +Q Sbjct: 356 LKRYKFKNGPLDVELNLYQLDDKQVSLTTDDKKALNFEGSMSFANRLKKNKQGLKNWLKQ 415 Query: 413 EGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGI 472 I YR+Y+AD+PEYNVAVD Y D V+ EYA PK ID + +RL D+I+ T L I Sbjct: 416 NEITAYRVYEADIPEYNVAVDIYGDSAVIFEYAAPKEIDEKTSEKRLQDVISLTAEQLKI 475 Query: 473 APNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRM 532 AP + +K R++QKG+ QY + ++ + V E+ A VNL DYLDTGLFLDHR+ RR Sbjct: 476 APENIAVKVRKKQKGEEQYTPMAKQNRTMVVEEFGAKFKVNLFDYLDTGLFLDHRLMRRY 535 Query: 533 LGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHR 592 + + +K K FLNLF+YTG+A+VHA LGGA++ TTVD+S+TYL+W + N LN ++ +R Sbjct: 536 IQENAKDKRFLNLFAYTGTASVHAALGGAKAITTVDLSKTYLKWGQDNFDLNNISNTRYR 595 Query: 593 LIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTI 652 QADCL WL A Q+DLIF+DPPTFSNSKRM+DAFDVQ DH+ L+ +K++L GT+ Sbjct: 596 FEQADCLKWLEHATAQYDLIFLDPPTFSNSKRMKDAFDVQSDHIKLLTWVKKILSPSGTL 655 Query: 653 MFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 +FSNNKRGF MD GL LGLKA I+ KTLS DF RN++IHN WLIT Sbjct: 656 IFSNNKRGFVMDEVGLIGLGLKAVNISDKTLSPDFKRNKKIHNSWLITH 704 >UniRef50_Q1QXV9 Ribosomal RNA large subunit methyltransferase L n=6 Tax=Proteobacteria RepID=RLML_CHRSD Length = 732 Score = 772 bits (1994), Expect = 0.0, Method: Composition-based stats. Identities = 323/724 (44%), Positives = 424/724 (58%), Gaps = 27/724 (3%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRI-MLPL 61 +L+ + RGLE LL EL + GA GVH + DT + Y+ +WSRLA+R+ + L Sbjct: 10 TLYIACPRGLEGLLADELADFGAEVTGTTVAGVHAQADTAMAYRICLWSRLANRVVLCLL 69 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 E + L + ++W G++ AV F G ++ IR++++GA VKD IVDA Sbjct: 70 REQGIERPEALVEAARRVDWGAHLRAGSSLAVDFHGQSEHIRHTRFGAQSVKDGIVDAMR 129 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 RP VD PD R+ LH+ + LDL G LH RGYR AG AP+KE LAAA+ Sbjct: 130 AAGRERPAVDLKTPDARIYAHLHRGRLLLGLDLVGGSLHQRGYRRDAGHAPLKENLAAAL 189 Query: 182 VMRSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 +MR+ W + G PL+DP+CG+GTLLIEAA++A D AP L R + F W HD W+ Sbjct: 190 LMRADWPARARRGEPLVDPLCGAGTLLIEAALMAADIAPQLSRDYFAFEAWVGHDPDAWR 249 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 E++ EAQ RA G S YG D I A+ NA AGI LI + +VAQLT P Sbjct: 250 ELQREAQARANVGRRRVKSKLYGRDQSPPAIAAAKANAMRAGIPALIDLQGAEVAQLTRP 309 Query: 298 LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 G V++NPPYGERL P ++ +++ LG ++ +F GW L+LF+ +PDL L Sbjct: 310 EGVDGPGLVITNPPYGERLGELPEVVPIYTALGERLRAEFEGWQLALFTGNPDLGHRTGL 369 Query: 358 RADKQYKAKNGPLDCVQKNYHVAEST--------------------PDSKPAMVAEDYTN 397 RA+KQY KNGPLDC V A+ + N Sbjct: 370 RAEKQYAFKNGPLDCKLLLIPVVAQRTERETSSEGDEPQGASGATSRPGPRNDGAQMFAN 429 Query: 398 RLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQ 457 RL KN K+ +KW +Q G CYRLYDAD+PEY +AVD Y D V VQEYAPP+++D +A++ Sbjct: 430 RLEKNRKRLKKWLKQSGERCYRLYDADMPEYALAVDVYGDRVHVQEYAPPRSVDPRQAQR 489 Query: 458 RLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDY 517 RL D + VLG+ P + K R RQ GK QY K GE EV+E A LWVNL DY Sbjct: 490 RLLDALEVIPQVLGVRPESVHYKQRTRQAGKAQYAKQDASGERFEVSEGPARLWVNLRDY 549 Query: 518 LDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWA 577 LDTGLFLDHR RR L +M+ GK FLNLF YTG+ATV A LGGA + +VD+S TYL WA Sbjct: 550 LDTGLFLDHRPVRRRLREMADGKRFLNLFCYTGTATVQAALGGASDSVSVDLSNTYLAWA 609 Query: 578 ERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLA 637 N LN L HR+++ DCL WL A +FDLIF+DPPTFSNSK+M+ DVQRDH Sbjct: 610 RDNFALNRLDPSRHRVVRDDCLRWLETAGSEFDLIFMDPPTFSNSKKMDAVLDVQRDHAR 669 Query: 638 LMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCW 697 L++ L GGT++FSNN+R F +D ++I+ +T DF+R +H+C+ Sbjct: 670 LIELAMARLAPGGTLVFSNNQRRFVLD--AAVGERFAVEDISARTFDPDFSRRPDLHHCF 727 Query: 698 LITA 701 LI Sbjct: 728 LIRH 731 >UniRef50_B0VAL5 Ribosomal RNA large subunit methyltransferase L n=16 Tax=Acinetobacter RepID=RLML_ACIBY Length = 734 Score = 767 bits (1981), Expect = 0.0, Method: Composition-based stats. Identities = 300/727 (41%), Positives = 418/727 (57%), Gaps = 29/727 (3%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 +N + + A GLE LL+ E+E LG + G + +G Y+ MWSRLASR++LP Sbjct: 7 LNHYWITCADGLETLLQEEIEQLGTKVTERKAGRLIIEGTLEHAYRICMWSRLASRVLLP 66 Query: 61 LGECKVYS-------DLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVK 113 + ++ +LY G + +W+ +F P +TFA+ + N+Q+ ++VK Sbjct: 67 IHTYELERTHDARDVAEELYEGAISFDWSLIFAPQSTFAIRLHAEREIKVNTQFATLRVK 126 Query: 114 DAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPI 173 D +VD+F RP++D P+I + V K + LDLSGD LH RGYR API Sbjct: 127 DGVVDSFMEAVGRRPSIDTKQPEITLYVLAGKTEHTYCLDLSGDSLHKRGYRRFMTDAPI 186 Query: 174 KETLAAAIVMRSGWQPGTP--LLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQH 231 KE LAAAI+ ++ Q P +LDPMCGSGT +IEA M+ TDRAPGL R R+GF+GW H Sbjct: 187 KENLAAAILQKAKLQERNPEIVLDPMCGSGTFIIEALMILTDRAPGLVR-RFGFNGWHGH 245 Query: 232 DEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGEL---ITFEV 288 D +W +KAEA R K L + FY D+D ++ R N AG +L I E Sbjct: 246 DRELWLSLKAEAAERHEKALEQPLPKFYAYDADWEAVKATRENIIAAGFEKLLGDIQIEE 305 Query: 289 KDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSAS 348 + +A + + +++NPPYGERL + + +L+ L +++ F ++ +A Sbjct: 306 RTLADWPDFGAENKTAFIVTNPPYGERLGDKASNRSLYLGLSALLQKNFPNQYAAIIAAQ 365 Query: 349 PDLLSCLQLRADKQYKAKNGPLDCVQK----------NYHVAESTPDSKPAMVAEDYTNR 398 + L A + + NG L + +A A+D+ NR Sbjct: 366 IEQADVLAFEAPETLRLMNGKLPIYVRFGTVKPEKVTQPFLANWQAQPVEMEEAQDFANR 425 Query: 399 LRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQR 458 L+KN+ +KWA +E I C RLYDADLP++N+AVD Y D + VQEYAPPK ID KA++R Sbjct: 426 LQKNMTALKKWATKENIYCLRLYDADLPDFNLAVDLYGDRLHVQEYAPPKKIDPEKAKKR 485 Query: 459 LFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYL 518 +AA +V G+ + + +KTR RQ G NQY K + V E A + VNLTDYL Sbjct: 486 FNLALAAIRAVTGLNRDAIFIKTRARQTGTNQYTKQSTANKRFIVQEGKAKILVNLTDYL 545 Query: 519 DTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAE 578 DTGLFLDHR R + Q ++GK FLNL+SYT +A++HA LGGA STT+VD+S TYL W++ Sbjct: 546 DTGLFLDHRQMRLRIAQEARGKHFLNLYSYTSTASLHAALGGAASTTSVDLSNTYLSWSK 605 Query: 579 RNLRLNGLT----GRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRD 634 N LNGLT H +DC WL+E +EQ+DLIFIDPPTFSNSK+ FDVQRD Sbjct: 606 ENFVLNGLTVDHADEQHMFFASDCFEWLKEGHEQYDLIFIDPPTFSNSKKFHGTFDVQRD 665 Query: 635 HLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIH 694 H++L+K L + GT+ FSNN RGF MD + + +EIT +T+ DF RN++IH Sbjct: 666 HVSLIKRAMNRLTSEGTLYFSNNYRGFEMDEE--IEALYDVEEITSETIGPDFKRNQKIH 723 Query: 695 NCWLITA 701 W I Sbjct: 724 RAWKIQH 730 >UniRef50_D2U8T0 Putative rna methylase protein n=1 Tax=Xanthomonas albilineans RepID=D2U8T0_XANAL Length = 726 Score = 764 bits (1973), Expect = 0.0, Method: Composition-based stats. Identities = 307/728 (42%), Positives = 412/728 (56%), Gaps = 39/728 (5%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 F S A+GLE LL EL G + GV+ +G R ++++WSRLASR++ PL Sbjct: 3 FFVSCAKGLEYLLVDELLAFGVAQATATVSGVNVEGTLRDAQRAVLWSRLASRVLWPLHA 62 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 + + LY GV + W E P T AV I +++Y A +VKDA+VD Sbjct: 63 FECPDEAALYAGVAVVPWCEHLTPEHTLAVDAHVSGAGITHARYAAQRVKDAVVDTLRNA 122 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 L RP+VD + PD+R+N+ L K A++++DL G LH RG+R AP+KE LAAA+++ Sbjct: 123 GLERPSVDVEHPDLRLNLSLRKGRATVSVDLGGGSLHRRGWRQAQNEAPLKENLAAALLL 182 Query: 184 RSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHR---------------GRWG 224 R W G LLDPMCGSGTLLIE A++A D APGL R Sbjct: 183 RGQWPALYAQGGCLLDPMCGSGTLLIEGALMAADVAPGLLRVALTAARRGDAVPTASSAA 242 Query: 225 FSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELI 284 S W D W E+ AEA+ R G A YG D D I+ AR NA+ AG+ I Sbjct: 243 PSRWLGFDLTAWDELLAEARQREAAGRAALRPVLYGGDIDPHAIRAARENAQAAGVAVAI 302 Query: 285 TFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSL 344 TFEV+DVA L P+ G V+ NPPY ERL ++ A L+ LG +K W S+ Sbjct: 303 TFEVRDVADLRAPV--SALGAVVCNPPYDERLVADAA---LYRRLGEALKRAVPQWRASV 357 Query: 345 FSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPA------MVAEDYTNR 398 + DL LRA K+Y+ NG L+C P + A+ NR Sbjct: 358 LCGNADLAYATGLRAAKKYQMFNGALECPLIVCDPIAVAPRASAEASHALSDGAQMVANR 417 Query: 399 LRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD-------WVVVQEYAPPKTID 451 LRKNL+KF+ W +E + C+R YDADLPEY A+D Y + ++ VQEYA P+ I Sbjct: 418 LRKNLRKFKNWRMREQVGCFRAYDADLPEYAAAIDVYQEDAGQARTFLHVQEYAAPENIP 477 Query: 452 AHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLW 511 R+R +++AA V + ++ LKTRER KG ++Y + ++GEFL V E++A L Sbjct: 478 DADVRRRRNELLAAAREVFAVPAEQVALKTRERGKGGSKYGRFEQRGEFLVVREHDALLR 537 Query: 512 VNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSR 571 VNL DYLDTGLFLDHR R + Q ++GK FLNLF YTG A+V A + GA STT+VD+S Sbjct: 538 VNLFDYLDTGLFLDHRPLRGAMAQQARGKRFLNLFCYTGVASVQAAVAGADSTTSVDLSG 597 Query: 572 TYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDV 631 TYL+W NL NG G HRL+QAD L WL ++D+IF DPPTFSNS R ED FD+ Sbjct: 598 TYLQWCADNLAFNGKGGAQHRLVQADALTWLEAEKNRYDVIFCDPPTFSNSARAED-FDI 656 Query: 632 QRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNR 691 QR+H+ L++ L G + FSNN R F+++ + LA QEI+ +T++ DF RN Sbjct: 657 QREHVRLLRAAVTRLTPEGVLYFSNNFRRFKLEENALAAFA-SCQEISAQTIAPDFERNP 715 Query: 692 QIHNCWLI 699 +IH W + Sbjct: 716 RIHRAWRL 723 >UniRef50_B0U0U4 Ribosomal RNA large subunit methyltransferase L n=18 Tax=Francisella RepID=RLML_FRAP2 Length = 718 Score = 748 bits (1932), Expect = 0.0, Method: Composition-based stats. Identities = 286/720 (39%), Positives = 419/720 (58%), Gaps = 33/720 (4%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 + FAS A+G+E LLK EL+ LG + + GV F+G Y+ ++S LAS++ML + Sbjct: 5 TFFASCAKGIELLLKDELDALGISSSEKL-AGVEFEGSFEDAYKVCIYSHLASQVMLKIA 63 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 KV LY + +INW + F+ F + SG + N+ + + K KDAIVD F R Sbjct: 64 TQKVTDQQALYDFISSINWLDYFDVNTAFKIIISGKHYDFNNTMFVSQKTKDAIVDQFRR 123 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + RPN+D D PD + + LHK+ ++ L L+ + LH R YR G AP+KE+LAAAI+ Sbjct: 124 ETNERPNIDTDNPDNIIKLHLHKQYVNVFLCLNIESLHKRSYRQFQGQAPLKESLAAAIL 183 Query: 183 MRSGW-----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 +++GW + L+DPMCGSGT+LIEAA++A + AP L + HDE +W Sbjct: 184 IKAGWLDELKKEQPILIDPMCGSGTILIEAALMAKNIAPVLLNKEFKLFNSKLHDEDLWN 243 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 + A +K ++ G D D V+ +A N AG+ +++ + +D+ L N Sbjct: 244 NLLEIA----KKAQKPTNAIIQGYDIDNNVLDKADRNIYQAGVEDVVNIKRQDIRDLENE 299 Query: 298 LPKGPYGTVLSNPPYGERL--DSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCL 355 L G +++NPPYGERL D L+ + + G + F GW +++ ++ + + + Sbjct: 300 LESE--GLIVTNPPYGERLYGDQLDELLDIFNGFGDRLSQDFYGWKVAILTSFDESIKEM 357 Query: 356 QLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAE----------------DYTNRL 399 QLR K+ K NG ++ V + + E + + + D++N+L Sbjct: 358 QLRTTKKNKFYNGAIETVLYQFDINEHARFKHESQLEKNIRLAEASALKSDEHIDFSNKL 417 Query: 400 RKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRL 459 +KNLK + W +Q G+ECYRLYDAD+P + VAVD Y + V +QEY TID + A+QR Sbjct: 418 KKNLKNLKPWLKQSGVECYRLYDADIPTFAVAVDIYGEHVFLQEYRADATIDQNIAKQRF 477 Query: 460 FDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLD 519 + I L I + + R+RQKGK QYQK ++ F + E+NA +VN DYLD Sbjct: 478 YQAIYQIHKTLDIQYENIHTRVRQRQKGKEQYQKNNDRNNFHVINEFNAKFYVNFDDYLD 537 Query: 520 TGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAER 579 TG+FLDHR R+++ + SK K LNLFSYT +A+VHA L GA+ TT+VDMS TYLEW + Sbjct: 538 TGIFLDHRKIRQLVAKASKNKTLLNLFSYTCTASVHAALKGAK-TTSVDMSNTYLEWGKN 596 Query: 580 NLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALM 639 N LN L + H IQADC++WL+ +E+FD+IF+DPPTFSNSKRM+D D+QRDH L+ Sbjct: 597 NFELNNLDIKKHNFIQADCISWLKSNSEKFDVIFLDPPTFSNSKRMDDILDIQRDHELLI 656 Query: 640 KDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 L+ G + FSNN R F+M + +AK + I + LS+DF N+ IHNCW I Sbjct: 657 NLAMDSLKKDGVLYFSNNYRRFKMSQEIIAK--FNCENIDKVCLSRDFLSNKNIHNCWEI 714 >UniRef50_P57444 Ribosomal RNA large subunit methyltransferase L n=4 Tax=Buchnera aphidicola RepID=RLML_BUCAI Length = 701 Score = 745 bits (1923), Expect = 0.0, Method: Composition-based stats. Identities = 343/703 (48%), Positives = 481/703 (68%), Gaps = 6/703 (0%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 MN LFAST G E+LL+ EL +LG + ++++GG+++K + L+Y+SLMWSR+ASRI L Sbjct: 1 MNDLFASTNFGTEKLLEKELLSLGVSDIKIIKGGIYYKSNDLLLYKSLMWSRIASRIYLC 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + + + DLY V +INWTE+F+ TF V+F G N+ IRNS +GA+ KDAI+D F Sbjct: 61 IKIFTINNIDDLYDHVYSINWTEIFHIHNTFLVNFKGTNNFIRNSLFGALVTKDAIIDQF 120 Query: 121 TRKNLPRPNVDRDAPDIRVN-VWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAA 179 K RPNV+ PDIR+ V L+ I LDLSG+ L+ RGYR PIKE LA Sbjct: 121 QNKYASRPNVNLIEPDIRIKLVLLNNNILHIMLDLSGEPLNKRGYRQFYNTTPIKENLAT 180 Query: 180 AIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 AIV+ SGW TP++DPMCGSGT LIEAAM+++DRAPGL R +WGF W ++++ +W++V Sbjct: 181 AIVLSSGWNENTPMIDPMCGSGTFLIEAAMISSDRAPGLKRLKWGFQFWKKYNKNLWKKV 240 Query: 240 KAEAQTRARKGLAE-YSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 EA+ + + G+ + + ++F G D D +I++A+ NA AG+ ++I F KDV L N Sbjct: 241 LEEAEEKFKIGIKKCFQNYFIGYDYDPEIIKKAKKNASNAGVLKIIQFLTKDVNNLKNVY 300 Query: 299 PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 K G +LSNPPYGER +E L+ L+ LG K F W LS+FSAS LL LQ++ Sbjct: 301 HKEQEGIILSNPPYGERYQTENKLVGLYVQLGITAKKYFKNWKLSIFSASTFLLDFLQMQ 360 Query: 359 ADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECY 418 + ++Y KNGPL+C+QKN+ + + ++ +RL KN KK +KW E +E + Sbjct: 361 SHEKYFFKNGPLNCIQKNFLIFFKNSS----ITTNEFKDRLNKNFKKLKKWINSEKLESF 416 Query: 419 RLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLV 478 R+Y ADLP YN+ VD Y WVV+QEY PK+ID +KA +RL D I T VL I+ N +V Sbjct: 417 RVYHADLPNYNIIVDVYDKWVVIQEYQAPKSIDHNKAFKRLCDAIYYTKEVLSISINNIV 476 Query: 479 LKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSK 538 LKTR + K K QY+KL +F+ + EY+A VNLTDY+DTGLF D R+ R++LG ++K Sbjct: 477 LKTRIKNKNKTQYKKLFNSNDFITIKEYHAKFLVNLTDYVDTGLFSDKRLVRKLLGVLAK 536 Query: 539 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADC 598 GKDFLNLFSYTG+ATV+AGLG A STT+VD+S TY++W+ RN+ LN LT H IQ DC Sbjct: 537 GKDFLNLFSYTGTATVYAGLGHANSTTSVDISNTYIKWSARNMSLNNLTSSQHNFIQYDC 596 Query: 599 LAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 658 L W+++ N++FDLIFI+PPTFSNSK+M+ +FD++RD+L +M LK++LR GTI+FS++ Sbjct: 597 LKWIKKTNQKFDLIFINPPTFSNSKKMQQSFDLKRDYLDVMIHLKKILRHDGTIIFSSST 656 Query: 659 RGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 R F ++ + + K+ L A++IT K S+D +N I++ WLI Sbjct: 657 RNFEINFNCIKKMQLHAKKITNKIQSKDHLKNSNIYHSWLIKH 699 >UniRef50_B9ZLS0 Putative RNA methylase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZLS0_9GAMM Length = 734 Score = 738 bits (1906), Expect = 0.0, Method: Composition-based stats. Identities = 313/725 (43%), Positives = 429/725 (59%), Gaps = 36/725 (4%) Query: 6 ASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECK 65 A+ ARGL LL EL LGA + + G VHF D ++Y+ L+ SR+ASRI+LPL Sbjct: 16 ATVARGLGPLLAEELATLGATDAREEGGAVHFSADLEMLYRVLLGSRIASRILLPLARFD 75 Query: 66 VYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNL 125 Y +AI+W + +PGATFAV G + IR++ + +++KDA+ DAF Sbjct: 76 QPDGDGCYTAARAIDWPALLDPGATFAVEVGGKSHHIRHTHFAGVRIKDAVADAFREATG 135 Query: 126 PRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRS 185 RP+VD PD+R+ + L + A +++D+ GLH RGYR G AP++E LAAA++ R+ Sbjct: 136 ARPDVDPKHPDVRILLQLQGDHARLSVDIGNGGLHRRGYRGAGGAAPLRENLAAALLARA 195 Query: 186 GW------QPGTP-LLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 GW P LLDP CGSGT++IEAA++AT APGL R + GWA HD A+WQ Sbjct: 196 GWPARVEGDPQQAQLLDPFCGSGTVVIEAALIATRTAPGLLRHDFRPQGWAGHDAALWQR 255 Query: 239 VKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 A+ R GSD D R +Q AR AR AG+ FEV DV LT P Sbjct: 256 CVDTARAAVRP---WQGPTLLGSDRDPRAVQAARQAARTAGVAACTRFEVADVLTLTPPA 312 Query: 299 PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 P G ++SNPPYGER+ +P LI L+SLLG +K FGGW ++L A L LR Sbjct: 313 PN---GLLISNPPYGERIGDQPELIKLYSLLGEHLKQAFGGWQVALLVADTTDSRRLGLR 369 Query: 359 ADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECY 418 A ++Y+ NGP+DC + + ++ A A ++ NRLRKNLK ++WAR++G+ CY Sbjct: 370 ATRKYRVHNGPIDCQLLEFDIHAREGQAEAAPPAPEFANRLRKNLKHLDRWARRQGVTCY 429 Query: 419 RLYDADLPEYNVAVDRYAD-----WVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIA 473 R+Y ADL EY + +DRY + +QE+A P +++ +A RL +AAT+ V G+A Sbjct: 430 RIYSADLDEYPLLIDRYQATDGSVHLHLQEFAAPASVEPARAEARLRGALAATLEVTGVA 489 Query: 474 PNKLVLKTRERQKGKNQYQKLGE-KGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRM 532 P L K R QKG++QYQ+ + V E+ L V L YLD+GLFLDHR RR Sbjct: 490 PAHLHYKQRRAQKGRSQYQRAETAQPAPFWVEEHGCRLKVELDAYLDSGLFLDHRPMRRR 549 Query: 533 LGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT----- 587 L + +G LNLF YT + + HA +GGAR T +VD+S TYL+WA NL NG Sbjct: 550 LQEECRGLRLLNLFCYTAAVSAHAAVGGARQTVSVDLSNTYLDWAADNLAANGFEATVRD 609 Query: 588 ------GRAHRLIQADCLAWLREANE----QFDLIFIDPPTFSNSKRMEDAFDVQRDHLA 637 H L++ADC+ W+REA + +F+ IF+DPPTFSNSKR E F+VQRDH+ Sbjct: 610 GRSRRRPDTHALLRADCITWVREAADDPALRFERIFLDPPTFSNSKRTEADFEVQRDHVE 669 Query: 638 LMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCW 697 L++D RLL G + FS N+R F +D + LA GL+A++IT+ TL +DF R H CW Sbjct: 670 LIRDAARLLTEDGILYFSTNRRRFELDTEALA--GLEARDITRDTLDEDFRRPPPPHRCW 727 Query: 698 LITAA 702 I+ A Sbjct: 728 AISNA 732 >UniRef50_A6GF98 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=A6GF98_9DELT Length = 783 Score = 734 bits (1896), Expect = 0.0, Method: Composition-based stats. Identities = 304/782 (38%), Positives = 421/782 (53%), Gaps = 86/782 (10%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M L+ + RG E+LL ELE LG + + +GGV +G Y++ +WSR+ SR++ Sbjct: 3 MLELYVTAPRGAEDLLAAELEALGLAKVRARKGGVEARGTLEQAYRACLWSRVGSRVLAA 62 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGL-------NDTIRNSQYGAMKVK 113 + LY QAI+WT GA+ A+ G I NS + A++VK Sbjct: 63 VATLDAGDGDLLYASAQAIDWTTHLRRGASLAISSGGAVVGGEGGRARIDNSHFAALRVK 122 Query: 114 DAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPI 173 DAIVD + RPNVD D PD+R+++ L +++DLSG+GLH RGYR AP+ Sbjct: 123 DAIVDQLRERWGRRPNVDLDQPDLRLHLHLVGREGKLSVDLSGEGLHRRGYRVAPVAAPL 182 Query: 174 KETLAAAIVMRSGWQ----------PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRW 223 +E LAAA+++R+GW L+DPMCGS TL IEAA +A D APGL R RW Sbjct: 183 RENLAAAVLLRAGWPSYLENTRAAGRSIGLVDPMCGSATLAIEAAWMAGDVAPGLGRDRW 242 Query: 224 GFSGWAQHDEAIWQEVKAEAQTRARKGLAEYS---SHFYGSDSDARVIQRARTNARLAGI 280 GF+GWAQ + +W+ + AEA+ R GLA + + DS+ R + R AG+ Sbjct: 243 GFTGWAQDEPELWRGLVAEAEARREAGLAALTREKARLLAYDSEPRAVAAGIDCVRAAGL 302 Query: 281 GELITFEVKDVAQLTNPLPKGP-------YGTVLSNPPYGERLDSEPALIALHSLLGRIM 333 E + E + + + P P G V+ NPP+GERL L +L++ LG + Sbjct: 303 IEHVHVERRSLPAIEAPAPSEAEAALDSWRGLVVCNPPWGERLGERRELESLYAALGARL 362 Query: 334 KNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPD-------- 385 ++ F GW ++ + P L L L A ++ ++GP++C + +T + Sbjct: 363 RDHFAGWEAAILTGDPGLGRHLGLHARRRNALQDGPIECQILRIRLDPATLERARGKDGE 422 Query: 386 ------------SKPAMVAEDYTNRLRKNLKKFEKWAR-QEGIECYRLYDADLPEYNVAV 432 + + + NRL KN KK KW R + CYRLYDAD+PEY AV Sbjct: 423 TRKVGTKARPEVRERSEGGRAFANRLSKNAKKLRKWLRAHPEVSCYRLYDADIPEYAFAV 482 Query: 433 DRYAD------WVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQK 486 D Y D VQEYA P T+D AR R + +A L + +++ LK R+RQK Sbjct: 483 DLYTDDGTGGIHAHVQEYAAPNTVDEKVARSRRGEALAVIREDLDLPRDRVHLKHRQRQK 542 Query: 487 GKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQM---SKGKDFL 543 G+ QY+++GE G V E A LWVNL DYLDTGLFLDHR R L + GK L Sbjct: 543 GRAQYERMGESGSTFCVAEGPARLWVNLEDYLDTGLFLDHRPLRLELSGEDSPAAGKRVL 602 Query: 544 NLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT---------------- 587 NLF YT + +VHA LGGA+ TT+VD+SRTYL+WA RN LNGLT Sbjct: 603 NLFCYTAAVSVHAALGGAKHTTSVDLSRTYLDWARRNFALNGLTVHGPEEGEEGRSANDR 662 Query: 588 ---------GRAHRLIQADCLAWLREANE-QFDLIFIDPPTFSNSKRMEDAFDVQRDHLA 637 AH+L++AD L WLR ++DLI DPP+FSNSKRM+D+ D+QRDH+ Sbjct: 663 RGGRRGGTRRAAHQLVRADVLDWLRRQGSLRWDLIICDPPSFSNSKRMDDSLDIQRDHVE 722 Query: 638 LMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCW 697 L++ LL GG ++FS NKR FR+D DGL L ++ ++ +DF R +IH W Sbjct: 723 LIRRCASLLSPGGALLFSTNKRRFRLDDDGLNGLSVEPH---AHSVPRDFERRAKIHQAW 779 Query: 698 LI 699 I Sbjct: 780 WI 781 >UniRef50_Q1QCP8 Ribosomal RNA large subunit methyltransferase L n=3 Tax=Moraxellaceae RepID=RLML_PSYCK Length = 776 Score = 720 bits (1860), Expect = 0.0, Method: Composition-based stats. Identities = 269/747 (36%), Positives = 399/747 (53%), Gaps = 50/747 (6%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 L + A GLE L+TEL + G G + G R +Y+ +WSR+ASR+++ + Sbjct: 28 DLIITCADGLEAPLQTELTSFGIASEIKSTGRLAVTGTLRDLYKICLWSRVASRVLMLIK 87 Query: 63 ECKVYSD----LDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVD 118 + ++ LY +++NWTE F+ TFA+ S + Q+ +++KDAI D Sbjct: 88 RKNINAEYDVAEQLYGLAKSVNWTEQFSLEQTFAIRLSVDKRVAVSQQFAMLRIKDAIAD 147 Query: 119 AFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLA 178 F RPNVD PD V ++ + A + LDLSG LH RGYR AP+KE LA Sbjct: 148 TFNEVYESRPNVDSKNPDFSVFATVNDKQAELYLDLSGTSLHRRGYRVAMTEAPLKENLA 207 Query: 179 AAIVMRSGWQPG---------TPLLDPMCGSGTLLIEAAMLATDRAPGLHR--GRWGFSG 227 AA++ +GW L+DPMCGSGT +IEA ++ D A G+ + ++GF Sbjct: 208 AALLYSAGWHKKNEAGDTPFYNALIDPMCGSGTFIIEALLMHCDYAVGIDKAANQFGFYE 267 Query: 228 WAQHDEAIWQEVKAEAQTRARKGL------AEYSSHFYGSDSDARVIQRARTNARLAGIG 281 W HD A+WQE+ +AQTR R L + +G D+D I N AG+ Sbjct: 268 WQHHDAALWQEMIDDAQTRFRAALEIANEQPDTLPLIFGFDADNGAIIATEKNLIAAGLQ 327 Query: 282 E---LITFEVKDVAQLTNPLPK------GPYGTVLSNPPYGERLDSEPALIALHSLLGRI 332 + L+ E + + QL+ L +++NPPYGERL E + L+ +G I Sbjct: 328 DLLPLLDIETRALDQLSTLLKPLVADGRLSNPLIITNPPYGERLGDEEMIKPLYQSIGLI 387 Query: 333 MKNQFGGWN----LSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAEST----- 383 +++ F G L + ++ + + L +R K + NG + + + Sbjct: 388 LQDSFAGSGIDPMLGILASHVEQVDILPIREPKTLRCHNGAITVYFRYGTLIAGQTGNLV 447 Query: 384 ----PDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWV 439 +D+ NRL+KNL + +K A+++ + R+Y+ADLP++ VA+D Y D+ Sbjct: 448 SRFEKREIEVEDGQDFINRLQKNLTRLKKLAKKDNVSNIRVYNADLPDFKVAIDLYGDYA 507 Query: 440 VVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLG---E 496 VQEYAPPKTI A++R + V GI ++ +KTR RQ G +QY K G + Sbjct: 508 HVQEYAPPKTIPPETAKKRFNLALMGIREVFGINREQIFIKTRARQSGNDQYSKQGNTEK 567 Query: 497 KGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHA 556 +G+F E A+L+VN TDYLDTGLF+DHR R + S+ K LNLF+YT +A+VHA Sbjct: 568 RGKFYIAREDGAYLYVNFTDYLDTGLFIDHRNMRARIKDNSRNKSVLNLFAYTCTASVHA 627 Query: 557 GLGGARSTTTVDMSRTYLEWAERNLRLNGL--TGRAHRLIQADCLAWLREANEQFDLIFI 614 L GA+ T+VD+S+ YL+W ++N LNGL + ++ + AD W+++ EQFD+IFI Sbjct: 628 ALAGAKKVTSVDLSQNYLDWGKQNFALNGLNVSSNKYQFVAADIFEWIKDNTEQFDIIFI 687 Query: 615 DPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLK 674 DPPTFSNSK+ + FDVQRDH AL+ L A G + FSNN F +D + Sbjct: 688 DPPTFSNSKKFQGTFDVQRDHAALINRAMNRLTADGILYFSNNFTRFELDEQLTER--YD 745 Query: 675 AQEITQKTLSQDFARNRQIHNCWLITA 701 +ITQKT+ DF + IH + I Sbjct: 746 IIDITQKTIGFDFDIKKPIHQSFEIRH 772 >UniRef50_A5WGC0 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Moraxellaceae RepID=RLML_PSYWF Length = 807 Score = 698 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 269/782 (34%), Positives = 398/782 (50%), Gaps = 84/782 (10%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 + + A GLE L+TEL ++ G + +Y+ +WSR+ASR++LP+ Sbjct: 26 YDIVVTCADGLEAPLQTELSHMDISHELKSTGRIAVNATLEQIYKICLWSRVASRVLLPI 85 Query: 62 GECKVYSD----LDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIV 117 + + + L + ++WTE F TFA+ S + Q+ +++KDAI Sbjct: 86 KKRNINKEYDVAEQLNGLARTVDWTEWFELDNTFAIRMSVDKRVQVSQQFAMLRIKDAIA 145 Query: 118 DAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETL 177 D F+ K RP+VD + PD + ++++ A I LDLSG LH RGYR AP+KE L Sbjct: 146 DTFSEKLDARPDVDSNNPDFPIYATVNEKQAEIFLDLSGTSLHRRGYRVAMTDAPLKENL 205 Query: 178 AAAIVMRSGWQPG----TPLLDPMCGSGTLLIEAAMLATDRAPGLHR--GRWGFSGWAQH 231 AA ++ GW + L+DPMCGSGT +IEA ++ D G+ + ++GF W +H Sbjct: 206 AAGLLYTVGWHKTKNSYSALIDPMCGSGTFIIEALLMHCDYPVGIDKAESQFGFYNWQEH 265 Query: 232 DEAIWQEVKAEAQTRARKGLAEYS----SHFYGSDSDARVIQRARTNARLAGIGELI--- 284 D +WQ+ +AQ R GL + + G D+DA I+ N AG+ ELI Sbjct: 266 DSELWQQCVVQAQERFHNGLQKAAAGKLPTILGFDADAGAIKAVHKNLIAAGLIELIPHL 325 Query: 285 TFEVKDVAQLTNPLPKG------PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFG 338 T E + ++QL L K V++NPPYGERL + L+ LG ++ F Sbjct: 326 TLEQRPLSQLKIALAKPLLDRKLKRPLVITNPPYGERLGESDFIKPLYQGLGLTLQEIFA 385 Query: 339 GWN----LSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPD--------- 385 L L +A + L + + + NG + ++ + + Sbjct: 386 KQKYQPMLGLLAAHVEQADVLPIEDPQTLRCHNGAITVYFRHGQLIRKEGESLITRFEKT 445 Query: 386 SKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYA 445 A+D+ NRL+KN+ +K A +E + R+YDADLP+Y VA+D Y D+V VQE+A Sbjct: 446 EIKVDEAQDFVNRLQKNVNHLKKLAAKEDVTNLRVYDADLPDYKVAIDVYGDYVHVQEWA 505 Query: 446 PPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQY-------------- 491 PPK+I AR+R + V GI ++ +KTR RQ G QY Sbjct: 506 PPKSIPPETARKRFNLALMGIREVFGINREQIFIKTRARQVGNTQYGNPEASAQSKESKN 565 Query: 492 -----------------------------QKLGEKGEFL-EVTEYNAHLWVNLTDYLDTG 521 Q+L +K + V E A+ +VN TDYLDTG Sbjct: 566 APEPKKDNRNRYKGNKFQQAREEAKRQEAQRLAQKKRKMHVVQEDGAYFYVNFTDYLDTG 625 Query: 522 LFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNL 581 LF+DHR R M+ S+G D LNLF+YT +A+VHA LGGA+S T+VD+S+ YL+W ++N Sbjct: 626 LFIDHRNMRSMIRSASRGADVLNLFAYTCTASVHAALGGAKSVTSVDLSQNYLDWGKQNF 685 Query: 582 RLNGLT--GRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALM 639 LNGL ++ I +D W+++ +QFD+IFIDPPTFSNSK+ + FDVQRDH AL+ Sbjct: 686 ALNGLDVTTSRYQFIASDIFDWIKDNTDQFDVIFIDPPTFSNSKKFQGTFDVQRDHTALI 745 Query: 640 KDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 L GG I FSNN F +D + + + EIT +T+ DF + IH+ + I Sbjct: 746 NRAMNRLANGGVIYFSNNFTKFELDEELYDR--YEVTEITSETIGFDFNPKKPIHHSFEI 803 Query: 700 TA 701 Sbjct: 804 RH 805 >UniRef50_B2IA87 Ribosomal RNA large subunit methyltransferase L n=19 Tax=Xanthomonadaceae RepID=RLML_XYLF2 Length = 724 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 306/728 (42%), Positives = 417/728 (57%), Gaps = 38/728 (5%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 F S A+GLE LL E+ LGA GV+ +G + ++WSRLASR++ PL Sbjct: 2 RFFVSCAKGLEYLLVDEVLALGAAGATATVAGVNVEGGLCDAQRLVLWSRLASRVLWPLA 61 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + LY GV A+ W E PG T AV + I +++Y A +VKDA+VD Sbjct: 62 AFACADEDALYAGVAALPWVEHVLPGQTLAVDAHVSGEAITHARYAAQRVKDAVVDTLRD 121 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + RP+VD + PD+R+N+ L K A++++DL G LH RG+R A +KE LAAA++ Sbjct: 122 AGVVRPSVDVEHPDVRLNLSLRKGRATLSVDLGGRALHHRGWRQAPHAASLKEHLAAAVL 181 Query: 183 MRSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGL---------------HRGRW 223 +R+GW G LLDPMCGSGTLLIE A++ D APGL R Sbjct: 182 LRAGWAKVYAEGGGLLDPMCGSGTLLIEGALMVADVAPGLSRYADPDAMSHVSVAERPVL 241 Query: 224 GFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGEL 283 S W D W+ + +AQ RAR+GLAE +GSD D R + A NAR AG+ + Sbjct: 242 LPSRWRGFDVVAWEALVVDAQQRARRGLAELRPVLHGSDIDPRALGAAFANARAAGVQDA 301 Query: 284 ITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLS 343 I F V + L P P+G V+ N PY RL ++P L+ LG ++ W + Sbjct: 302 IEFVVAGIDVL--PAVSEPHGVVVCNAPYDVRLAADP---GLYRHLGDALRRVVPRWRAA 356 Query: 344 LFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHV-----AESTPDSKPAMVAEDYTNR 398 L S L LRADK+Y+ NG L+CV E+ + A+ NR Sbjct: 357 LVCGSSTLAFATGLRADKKYQFFNGALECVLIVCDPVVPLAREAGGAQALSEGAQMAANR 416 Query: 399 LRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD-------WVVVQEYAPPKTID 451 LRKN+++ +KW + G+ECYR+YDADLPEY A+D Y + ++ VQEYA P +I Sbjct: 417 LRKNVQRLKKWRIRAGVECYRVYDADLPEYAAAIDVYQEVDGARRLFLHVQEYAAPASIP 476 Query: 452 AHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLW 511 R+R +++AA +V ++ ++ LKTR+R KG +QY ++GEF V E+ A L Sbjct: 477 EGDVRRRRHELLAAVRAVFDVSVAQVALKTRQRGKGGSQYGCFAQRGEFFHVCEHGALLR 536 Query: 512 VNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSR 571 VNL DYLDTGLFLDHR R + + + GK FLN+F YTG A+V A + GA +TT+VD+S Sbjct: 537 VNLFDYLDTGLFLDHRPLRGRMAREAVGKRFLNVFCYTGVASVEAAVAGAAATTSVDLSS 596 Query: 572 TYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDV 631 TYL W N LNG G HRL+QAD LAWL Q+D+IF DPPTFSNS R +D FDV Sbjct: 597 TYLHWCTDNFALNGQGGVRHRLVQADALAWLEAERGQYDVIFCDPPTFSNSARADD-FDV 655 Query: 632 QRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNR 691 QRDH+ L++ L GG + FSNN R FR+D+D +A + +EI+ T+ DF+RN Sbjct: 656 QRDHVRLLRAAVARLTPGGVLYFSNNFRRFRLDVDAVAAFA-QCEEISPVTIDLDFSRNT 714 Query: 692 QIHNCWLI 699 +IH WL+ Sbjct: 715 RIHRTWLL 722 >UniRef50_Q0VQU5 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Alcanivorax RepID=RLML_ALCBS Length = 704 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 271/712 (38%), Positives = 388/712 (54%), Gaps = 26/712 (3%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 A+ GL +LL EL +LG + + V F G + +WSRL+ R++L L Sbjct: 2 EFVATCMPGLADLLSDELGSLGISVTETGRAHVSFSGGVADALKVCLWSRLSERVLLHLA 61 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 V D+ + +W + A +H + +++ A + A+ + F Sbjct: 62 TLGVTPDIAPEKLAASQDWLSLVGNNAPVHLHIEHGAEVRGDNRISAKRFIHALPEQFAI 121 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 P+ + + L A + LDL+G+ LH RGYR G AP++ETLAAAI+ Sbjct: 122 SREPKGSCC-------IRARLDLNEAHLWLDLAGEPLHRRGYRLAGGRAPLRETLAAAIL 174 Query: 183 MRSGWQPG---TPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 GW + L+DP CGSGTL+IEAA++A RA G R +GF W +W + Sbjct: 175 WAVGWGKEGRHSALIDPFCGSGTLVIEAALIAAGRAAGAQRQHYGFQQWRGCRRQLWLDA 234 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 + EA ++ + S G DS+A +Q A NA AG+ I FE +++ L Sbjct: 235 QKEAGESGKRPVPAVSLK--GFDSEASTLQLALQNAERAGVRNAIHFERRELGALRRR-D 291 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 G V+ NPP+GERL+ +P LH LGRI+ + G+ L A +++ + Sbjct: 292 FVDNGIVVGNPPWGERLEEKPQAGWLHYALGRILSVRAPGYQALLLGADAEVMDRSGMNL 351 Query: 360 DKQYKAKNGPLDCVQKNYHVAESTPDS----------KPAMVAEDYTNRLRKNLKKFEKW 409 ++Q++ KNGP + + Y + TP + A+ NRLRKN K +W Sbjct: 352 EQQWRLKNGPFNNFIRLYSPRKQTPANVVKVADDSAFNVPEGAQPLLNRLRKNGKHLRRW 411 Query: 410 ARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISV 469 +E I+CYRLYD DLPE+NVAVD YAD V+VQE+ PKTID KA++R + A + Sbjct: 412 LEREDIQCYRLYDRDLPEFNVAVDIYADQVLVQEFKAPKTIDPEKAKERRDWAVTAVRAA 471 Query: 470 LGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIA 529 LG+ ++ L+TRE+QKG QYQKL +G++ V E + L +NL DYLDTGLFLDHR Sbjct: 472 LGVHREQVHLRTREKQKGNQQYQKLDAQGQYRVVREGQSQLLINLQDYLDTGLFLDHRPT 531 Query: 530 RRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGR 589 R + + + GK FLNLF+YTGSATVHA +GGA+ T TVD S+ YL+WA NL NG + Sbjct: 532 RLRIAEEASGKRFLNLFAYTGSATVHAAVGGAKRTVTVDSSKRYLDWAACNLAANGFSTD 591 Query: 590 AHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAG 649 H L +AD + WL E EQFDL+F DPPTFSN+K D F V+ H L++ + R L G Sbjct: 592 QHELARADTMRWLDECKEQFDLVFCDPPTFSNNKSRSD-FVVEEHHGDLIRKIMRCLEPG 650 Query: 650 GTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 G + FS N R F+MD ++I++ ++ +DF RN +IH C+ I Sbjct: 651 GVLYFSCNYRRFQMDES--ISKWYAVEDISRWSIPEDFRRNEKIHYCYAIRH 700 >UniRef50_C7N0P8 Predicted N6-adenine-specific DNA methylase n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N0P8_SLAHD Length = 729 Score = 660 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 251/728 (34%), Positives = 378/728 (51%), Gaps = 41/728 (5%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 FA A G E+ L EL + + + GGV F G ++ + SR+A+R+ L LG Sbjct: 9 EFFARCASGFEDQLAAELTQIRCRRVRPLHGGVAFFGAYEDGLRACLHSRVATRVQLVLG 68 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + LY GV+A+ W + PGAT A+ +G N +RN+Q+ A+KVKDA+ D Sbjct: 69 RVSARNADALYDGVRALPWETLVAPGATIAMRATGQNSNLRNTQFTALKVKDAVCDRLAA 128 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDR--AGIAPIKETLAAA 180 + RP+VD PD V++ LH++ A+I+L+L+G LH RGYR+ AP+KETLAA Sbjct: 129 ERGARPDVDGSDPDFSVDILLHRDKATISLNLAGPVLHKRGYREPGVQTEAPLKETLAAG 188 Query: 181 IVMRSGWQ----PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 +++ +GW G DPMCGSGTL IEAA++AT APGL R RWGF+ + HD A W Sbjct: 189 MLLAAGWDSMVADGMGFADPMCGSGTLAIEAALIATRAAPGLLRNRWGFTAYMPHDPAAW 248 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 + + AEA+ AR E D + + AR NA AG+ ELI F V D A L Sbjct: 249 ERLVAEAEA-ARVPAWESGVRILAGDMNEEAVAVARANAERAGVAELIEFYVDDAANLGT 307 Query: 297 PLPKG---PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLS 353 L +G G V NPPYG RL S L +++ L GGW L++ S + + Sbjct: 308 HLKRGRRLSGGLVACNPPYGHRLLSGEDLSQVYAALDSATAKLGGGWQLAIISPDEGVDT 367 Query: 354 CLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAM-------------VAEDYTNRLR 400 L ++ NGPLD + Y + ++ +E + R R Sbjct: 368 GLGRMPERSIACHNGPLDTSLRIYDLGKAAARLSIPSLSGSDSVVPVAEGASEQFAARFR 427 Query: 401 KNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRY-----ADWVV-VQEYAPPKTIDAHK 454 K K+ KWAR+ G+ YR+YDADLPEY +VD + +V V+E+ +DA + Sbjct: 428 KVAKERAKWARKAGVHSYRVYDADLPEYAFSVDVFRSAEDDGLLVRVEEHRAGSNVDADR 487 Query: 455 ARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNL 514 A +R+FD +A +VL + ++ K ++K + + +++V E + +++ Sbjct: 488 ANRRVFDGLAIVSAVLDVPRERVFCKRARQEKSRPAAE-----PVWVDVRESDFVFDMDI 542 Query: 515 TDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYL 574 + GL LD R R +L + K F L ++ G+ +V+A GGA ST TVD + +L Sbjct: 543 ASQRECGLPLDMRPVRELLRAHAASKRFACLLAHGGAPSVYAAAGGAVSTVTVDPADPFL 602 Query: 575 EWAERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAFDV 631 E A+ L +NG GR H L+ D L W R A +DL+F D F +S+ + D+ Sbjct: 603 EQADHALYVNGFRGREHDLVCDDPLDWARREARAGRTYDLVFCDLSAFPSSR----SHDL 658 Query: 632 QRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNR 691 DH+++++ + R+L G ++ + + R F + GL AQ+IT T+ DF R Sbjct: 659 IADHMSVIQQIVRILSPEGKLVLTCHDRRFNLSDKAFGGHGLTAQDITADTIGHDFTRTP 718 Query: 692 QIHNCWLI 699 +IH +LI Sbjct: 719 KIHRAFLI 726 >UniRef50_B9CL66 Methyltransferase n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CL66_9ACTN Length = 747 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 265/757 (35%), Positives = 387/757 (51%), Gaps = 72/757 (9%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + FA+ +G E+LL EL L + + + G V F+G Y+ +WSRLASR++L Sbjct: 5 IQEFFATCPKGFEQLLGCELSRLSISQIRPLSGQVSFRGTLADAYRVCLWSRLASRVVLV 64 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 LG +LY GV I+W +P ATFAV+ G N +RN+ + A++VKDAIVD Sbjct: 65 LGRMSATQADELYAGVSEIDWEAHISPHATFAVNAHGTNSELRNAHFTAVRVKDAIVDQL 124 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDR----AGIAPIKET 176 K RP V+ D PD+ V V + K AS+ +DL+GD L RG R +AP++ Sbjct: 125 IAKRGSRPMVNTDFPDVTVTVRITKTHASLGIDLAGDPLFKRGIISRRTLTQNLAPLRPD 184 Query: 177 LAAAIVMRSGW--------QPGTPLLDP------------MCGSGTLLIEAAMLATDRAP 216 AAA++ G G L P G+G+L+ E + +D AP Sbjct: 185 YAAALLAAHGIYGGNRSEKHGGKSLETPAYEAAAATPSILFSGAGSLVHELVGIRSDCAP 244 Query: 217 GLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNAR 276 GL R RWG GW HD +W E+ EA RA SD+ + AR + R Sbjct: 245 GLLRTRWGMLGWVGHDSKVWSELIDEATYRANACEKNLEVCI--SDTRPKADVAARHSLR 302 Query: 277 LAGIGELITF-EVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSE-PALIALHSLLGRIMK 334 +G+ + F K++A+ T G V +G L + AL AL Sbjct: 303 ASGLSASLRFLSPKELAEHTT-----DGGIVADMSWFGHNLAVQGSALSAL--------- 348 Query: 335 NQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYH-----------VAEST 383 F G ++ S + L ++ G + Y + Sbjct: 349 AHFVGTKATVLSLDETSDTTLGQQSSSVTNVLVGKTPAGIRTYAATKNFELPPTVTVRAK 408 Query: 384 PDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD------ 437 ++ ++ RL K K +WA++E I CYR+YDADLP+Y V++D Y Sbjct: 409 QLPVLVGASDQFSARLTKVAKLRARWAKREDISCYRIYDADLPDYAVSIDLYQGCTSSKR 468 Query: 438 WVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEK 497 W+ + EYA P IDA A++RL D++ VL + P+ + L+ R R KG +QY GE Sbjct: 469 WLQISEYAAPHDIDATLAKKRLLDVLTIAPEVLEVPPHHVNLRIRTRAKGGSQYVSEGEA 528 Query: 498 G-----EFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSK----GKDFLNLFSY 548 + L + E V+ + +LD G+FLDHR R M+ +M K K FLNLF+Y Sbjct: 529 PTYAHKQTLLIDEGGLTFEVDFSQHLDCGIFLDHRQTRAMIREMMKTAGTAKSFLNLFAY 588 Query: 549 TGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL---REA 605 TG+AT +A GGA TTTVD+S+ LEWA RN+ NG G+ H +QAD L W+ R + Sbjct: 589 TGTATCYAADGGALHTTTVDLSKPSLEWARRNMCQNGFDGQEHEFVQADALTWITEQRRS 648 Query: 606 NEQFDLIFIDPPTFSNSKRMEDA-FDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD 664 ++++IF D PTFSNS RM+ A FDVQRDH L+ + RLL GG +FS N R F+ D Sbjct: 649 KNRWNVIFCDVPTFSNSSRMKKASFDVQRDHAELIIGISRLLTRGGVALFSCNLRSFKPD 708 Query: 665 LDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 ++ + + G+ ++IT++T+ +DFARN++IH+C+ +T Sbjct: 709 VEKIERAGVSLEDITKETIPEDFARNQKIHHCYRVTR 745 >UniRef50_C8WGP0 THUMP domain protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WGP0_EGGLE Length = 768 Score = 641 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 292/764 (38%), Positives = 411/764 (53%), Gaps = 73/764 (9%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 LFAS GLE L EL+ LG + + GGV F D R + +WSRLASRI++ +G Sbjct: 7 ELFASCLSGLEAPLAEELKRLGIKRVRPLGGGVAFFCDVRHALSACLWSRLASRILVVVG 66 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 LY GV+ I W + PGA+ +V G+ND +RN+++ A+KVKDA+ D Sbjct: 67 RVNAGDANLLYEGVRRIAWEGVIVPGASMSVQAHGMNDELRNTRFTALKVKDAVCDRLRE 126 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGY--RDRAGIAPIKETLAAA 180 RP+VD D D+ V+V + + A+I+LDLSG+ L+ R Y D AP+ LAA Sbjct: 127 MRGERPDVDADHADVSVDVRVREGRATISLDLSGESLYHRSYLTPDDGPDAPLSCALAAG 186 Query: 181 IVMRSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 ++ +GW+ G L+DP CG G L++EAA A D APGL R RWGF GW D +W Sbjct: 187 LLALAGWRTRGSRGEALVDPACGDGFLVVEAASAACDLAPGLTRERWGFFGWVPSDPDVW 246 Query: 237 QEVKAEAQTRARKGLA-----------------EYSSHFYGSDSDARVIQRARTNARLAG 279 E+ EA R +GLA F G+ + + I RAR +A+ AG Sbjct: 247 NELIDEADERFERGLASATAPGALDGPASAPPDPAHVRFAGASTSSPAIARARVHAKRAG 306 Query: 280 IGELITFEVKDVAQLTNPLP------------KGPYGTVLSNPPYGERLDSE-------- 319 + + ++ E+ D + + + TV S P GER S+ Sbjct: 307 LRQAVSIELADAQSVDELVSRVCAAAGRERGGEAASCTVASVLPTGERAQSDARSQADAA 366 Query: 320 ---------PALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPL 370 PA G I++ +FG D + L DK P+ Sbjct: 367 AFVRAASVAPAGSTFAVAGGEIVEARFGVAPAVRAVLGRDRVETEALVFDKP------PM 420 Query: 371 DCVQKNYHVAESTPD---SKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE 427 + V+ + +E + RLRK K+ KWAR+EG+ CYR+YDADLP+ Sbjct: 421 EAVKVVVPDPAGGAEHVVEVLEPTSEQFAARLRKTAKERRKWARREGVSCYRVYDADLPD 480 Query: 428 YNVAVDRY---AD-----WVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVL 479 Y VA+D Y D ++ + EYA P TID KA++R D++A VLG+ P+ + Sbjct: 481 YAVAIDVYPGAGDAEGNLYLHIAEYAAPSTIDPGKAQRRYDDVLALAPVVLGVRPDHVFS 540 Query: 480 KTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKG 539 K R R KG +QY+ G + +V E V+L YLDTGLFLDHR+ R ++G+ ++G Sbjct: 541 KVRRRDKGGSQYRDSGRRSYVTQVREDGYLFEVDLAGYLDTGLFLDHRLTRELVGKKAEG 600 Query: 540 KDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCL 599 K FLNLF+YTGSA+VHA GGA+ST TVD+S+TYL+WA RN+ NG G H + D + Sbjct: 601 KRFLNLFAYTGSASVHAAGGGAKSTATVDLSQTYLDWAARNMAANGFEGEQHTFERGDTM 660 Query: 600 AWL---REANEQFDLIFIDPPTFSNSKRM-EDAFDVQRDHLALMKDLKRLLRAGGTIMFS 655 AW+ R +FDL+F+DPPTFSNSK M + +DVQRDH+ L+ + RLL G +FS Sbjct: 661 AWVTEARRTGRRFDLVFVDPPTFSNSKAMGKRTWDVQRDHVELLIGVSRLLSEEGEAVFS 720 Query: 656 NNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 N R F+ D + LAK G+ ++IT +T+ DF RN +IH C+L+ Sbjct: 721 CNLRSFKPDEEALAKYGVTLEDITAQTIPHDFERNPRIHKCYLV 764 >UniRef50_D0KZE4 Putative RNA methylase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZE4_HALNC Length = 751 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 261/739 (35%), Positives = 370/739 (50%), Gaps = 49/739 (6%) Query: 6 ASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECK 65 +A ++ L E+ +L + GV Y+ + S +A + L L + Sbjct: 15 VVSAPDMQAPLAEEIRSLVDAKVSDRPFGVLLDATPEQAYRIVCDSLIAGHVYLTLITGQ 74 Query: 66 VYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNL 125 + +LY VQ I+W E F + +G D +R++ + A ++KDAIVD F + Sbjct: 75 AATADELYRLVQQIDWAEHLAAEGYFTISATGSTDALRHTGFVATRIKDAIVDQFRERTG 134 Query: 126 PRPNVDRDAPDIRVNVWLH-KETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMR 184 RP +D + PDIR++ L +++L+LS LH RGYR G+AP++ETLAA ++ R Sbjct: 135 TRPTIDSEQPDIRLHCHLTASGHTTLSLELSNGSLHRRGYRTDGGLAPLRETLAAGMLWR 194 Query: 185 SGW--------QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 + W + G L DPMCGSGTLLIEAA+ T L R G +GW H E Sbjct: 195 ARWPQLVASETETGAALFDPMCGSGTLLIEAALRLTGLPQDLRVKRIGSTGWLGHREQAQ 254 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 + V A+ G D D I AR NA AG+ L+ F D + Sbjct: 255 KRVLDNPPELAK---GVDKLTLIGQDIDIEQITAARANAERAGVDHLMVFREADAWKAPC 311 Query: 297 P--LPKGPYGTVLSNPPYGERL--DSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLL 352 P +G V+SN PYG RL + S L + F GW+ + + Sbjct: 312 PPEFEGKSHGLVVSNLPYGHRLDVGGDHEGEPDWSALTDQWQRCFNGWHWAFLLPEGE-G 370 Query: 353 SCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPA------------------MVAED 394 LR ++ + + P + A Sbjct: 371 QNWPLRYERVFPMDQSGIAIDMIRGSFDGKARREAPGPIGLANRLCAAAEQARALVDAAP 430 Query: 395 YTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD-----WVVVQEYAPPKT 449 + NRL+KN + +K A +EG C+R+YDADLP++N AVD Y D W +QEY P Sbjct: 431 FANRLQKNYRHLKKLAEREGWCCFRVYDADLPDFNCAVDLYRDEAGETWADIQEYRAPNK 490 Query: 450 IDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAH 509 ID AR RL I+ + L +A N V++ R+RQ G QYQK+ ++ V E + Sbjct: 491 IDPQLARARLSIIVEQVMENLSLAENHSVVRQRKRQTGTEQYQKITQERLERVVHEGSTR 550 Query: 510 LWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDM 569 LWVNLTDYLDTGLFLDHR+ R + ++S+GK LNLF YT +A+V A GA T ++D+ Sbjct: 551 LWVNLTDYLDTGLFLDHRLVRDRVAELSRGKKLLNLFCYTATASVRAAHQGASRTVSIDL 610 Query: 570 SRTYLEWAERNLRLNGLT-GRAHRLIQADCLAWLREAN------EQFDLIFIDPPTFSNS 622 S TYL+WAERN LN L G H LI+AD L WL + + E+FD+IF DPPTFSNS Sbjct: 611 SNTYLDWAERNFTLNNLKVGTEHSLIRADVLDWLEQRSNAIYQPERFDVIFCDPPTFSNS 670 Query: 623 KRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKT 682 K M+D D+QRDH L++ LL GT++FSNN +GF + L + + ++++KT Sbjct: 671 KAMQDTLDIQRDHEFLVRSCMHLLSDDGTLIFSNNLKGFTLSSKLLDE--FRINDLSRKT 728 Query: 683 LSQDFARNRQIHNCWLITA 701 L DFAR + + I Sbjct: 729 LPGDFARTPNRRSVFEIRH 747 >UniRef50_C8W7K3 THUMP domain protein n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W7K3_ATOPD Length = 760 Score = 631 bits (1627), Expect = e-179, Method: Composition-based stats. Identities = 261/762 (34%), Positives = 394/762 (51%), Gaps = 76/762 (9%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 FA+ +G E+LL ELE+L + + + G V F G Y+ +WSRLASR++L L Sbjct: 6 EFFATCPKGFEKLLSQELESLHIKKVRPLGGQVAFYGLLADAYRVCLWSRLASRVILVLD 65 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + + LY + + W + P AT AV+ G ND +RN+ + A++ KDAIVD Sbjct: 66 RIEAATSDTLYEELSHLAWEDHIGPRATIAVNAHGTNDQLRNTNFIAVRTKDAIVDRLAA 125 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGI----APIKETLA 178 K RP V+ APD+ + V + + A++ +DL+G+ L R G AP++ A Sbjct: 126 KRGSRPMVNTLAPDVTIVVRISRNRATVGIDLAGEALFKRSLTGGRGPAREFAPLRLDYA 185 Query: 179 AAIVMR--------SGWQPGTPL-LDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWA 229 AA++ SG+ P L G+G L EAA +A D APG+ R RWG +GWA Sbjct: 186 AALLYLQAQTATSASGFSPDALLPALLFPGAGALAQEAAGMALDVAPGILRARWGMTGWA 245 Query: 230 QHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVK 289 H++ +WQ++ AEA RA KG E Y +DS + + R + + F Sbjct: 246 GHNDDVWQDLLAEADERAEKG-QERQITLYAADSRPKAKEAVLYTLRAGSLKADVQF--- 301 Query: 290 DVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALI-ALHSLLGRIMKNQFGGWNLSLFSAS 348 +A + V+++ + + EP L + ++ LG F G +L ++ Sbjct: 302 -LAASELLKHAEHFTGVVADLSWTK---EEPTLQGSAYATLG-----LFAGQASTLLTSD 352 Query: 349 PDLLSCLQLRAD--------------KQYKAKNG-PLDCVQKNYHVAESTPDSKPA---- 389 + + L+ + Y A N D N V+ S P S PA Sbjct: 353 TNTDTVLRATPTQTLSVYVGNSIATIRSYPAANAEGADSSATNAPVSSSKPTSVPAGPTV 412 Query: 390 -----------MVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD- 437 ++ + RL K K+ KWAR+ + CYR+YDADLP+Y V++D Y Sbjct: 413 MVNNQPVSVLVPASDQFAARLTKVAKQRAKWARKNDVSCYRVYDADLPDYAVSIDIYKGA 472 Query: 438 -----WVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQ 492 W+ + EYA K ID A++RL D++A +LG+ + + L+TR R KG +QY Sbjct: 473 TKPTTWLQISEYAASKEIDPDLAKRRLLDVLALAPRILGVPSSNVNLRTRTRAKGGSQYS 532 Query: 493 KLG-----EKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSK----GKDFL 543 G + E L + E VN LD G+FLDHR R + ++ K K FL Sbjct: 533 NEGSATDNSRKEMLLIDEGGLLFEVNFASRLDCGIFLDHRDTRAEIRELMKRAGTAKSFL 592 Query: 544 NLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW-- 601 NLF+YTG+AT +A G A TTTVD+S+ LEWA+RN++ NG G H +QAD L+W Sbjct: 593 NLFAYTGTATCYAADGDALHTTTVDLSKPSLEWAKRNMKRNGFGGEDHEFVQADVLSWIT 652 Query: 602 -LREANEQFDLIFIDPPTFSNSKRMED-AFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 659 +R ++++IF D PTFSNS RM+ +FDVQRDH L+ + RLL GG +FS N R Sbjct: 653 EMRHTKNRWNVIFCDVPTFSNSSRMKQSSFDVQRDHAELIIGISRLLTHGGVAIFSCNLR 712 Query: 660 GFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 F+ D++ + + G+ ++IT KT+ +DF+RN++IH+ + I+ Sbjct: 713 TFKPDVEKIERAGVVIEDITSKTIPEDFSRNQKIHHAYKISR 754 >UniRef50_A1ARJ2 Putative RNA methylase n=9 Tax=Desulfuromonadales RepID=A1ARJ2_PELPD Length = 393 Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats. Identities = 143/378 (37%), Positives = 208/378 (55%), Gaps = 7/378 (1%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 FA+ RG E++ EL LG Q +GGV F+ + +Y++ +W R ASR+++ L Sbjct: 23 ECFAAVPRGSEDVTAAELRLLGIEGAQAGRGGVSFRTNRAGLYRANLWLRSASRVLVRLA 82 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 S +LY GV AI W EM P T AV S + + +S + A+K KDAIVD Sbjct: 83 GFPCSSPAELYDGVHAIPWQEMITPAMTLAVDCSLRDSALTHSGFVALKTKDAIVDRIRE 142 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 RPNVD +PD+RVN+ L K +++LD SGD L RGYR AP++ETLAAAI+ Sbjct: 143 ACGSRPNVDTASPDVRVNIHLVKNVCTVSLDSSGDALDRRGYRLERNEAPLRETLAAAII 202 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 +GW L DPMCGSGT+ IEAA++A PG +R +GF W D +W+ ++AE Sbjct: 203 ALTGWDGNVALADPMCGSGTIPIEAALMAARVPPGRNRS-FGFQRWQDFDPRLWKGIQAE 261 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 A++ R+ G DSD+R + AR NA AG + F + Q P+G Sbjct: 262 AESGIRQL---PVGLVSGYDSDSRALSIARRNAAAAGFEGQVHFFHSSLEQFR---PEGE 315 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 G V+ NPPYG+R+ E L L+ +G I+K + GW + + + +L + L+A ++ Sbjct: 316 GGVVIINPPYGKRMGEEDELKELYCQIGDILKQRCQGWTGYVLTGNLELAKYIGLKASRR 375 Query: 363 YKAKNGPLDCVQKNYHVA 380 + NGP++C Y + Sbjct: 376 FVLYNGPIECRLLKYELY 393 >UniRef50_Q55156 Putative RNA methyltransferase slr0064 n=22 Tax=Cyanobacteria RepID=Y064_SYNY3 Length = 384 Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 135/378 (35%), Positives = 211/378 (55%), Gaps = 6/378 (1%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 FA+ ARGLE + EL LGA + + GV F GD L+Y+ +WSRL R+++P+ Sbjct: 13 PYFATVARGLEAIAAQELTELGAEQVKPEFAGVAFIGDRALLYRINLWSRLIYRVLMPMA 72 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 K ++ DLY ++ I+W E F+P T ++ +G N + +S + A++VK+AIVD Sbjct: 73 TVKAFNAQDLYRSIKKIDWDEYFSPEQTLQINCTGKNPQLNHSHFTALQVKNAIVDQQRD 132 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + R +VD + PDI +N +H+ ++LD +G LH RGYR G AP+KETLA+A++ Sbjct: 133 RYQRRSSVDLEQPDIVINAHIHQNHCQLSLDSTGFSLHRRGYRPALGNAPLKETLASALL 192 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 +GW P PL DP+CGSGT L+EA + + + APG + + F W D+ +W + Sbjct: 193 TMAGWTPELPLYDPLCGSGTFLLEAGLQSLNIAPGKFQPGFCFQQWPDFDQDLWHSLLQT 252 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 A+ R L + +GSD D VIQ A++NA+ +G I ++ + A + P Sbjct: 253 AKAGERDTL---QAPLWGSDGDREVIQAAKSNAQQCQLGGKIHWQKLNFADIEPP---AA 306 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 G ++ NPPYG+R+ E AL + +G ++K +F GW +FS + L + LR + Sbjct: 307 EGVLICNPPYGKRIGQEEALGDFYQQIGDVLKQRFRGWTAFVFSGNKALTKRIGLRTSAR 366 Query: 363 YKAKNGPLDCVQKNYHVA 380 + NG L C Y + Sbjct: 367 FPVNNGGLPCTLLKYELY 384 >UniRef50_C6WWA7 Putative RNA methylase n=2 Tax=Betaproteobacteria RepID=C6WWA7_METML Length = 421 Score = 460 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 129/390 (33%), Positives = 209/390 (53%), Gaps = 7/390 (1%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 N FA+ RGLE+LL EL+ + A V GGV F GD + Y + + SRLA+RI+ + Sbjct: 39 NRYFATCPRGLEQLLADELKQISAKVVNVTDGGVSFDGDWSICYAANLHSRLATRILWQV 98 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 G K ++ DL+ +NW + F+ F V +G+ +++ ++ +K+KDA+ D F Sbjct: 99 GRGKYLNEEDLFNAAYKMNWPQWFDVKHDFMVKVTGVKCPLKSLEFATLKIKDAVCDKFR 158 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 + RP +D P +R++ +L + +D SG L+ RG R + AP++E LAA I Sbjct: 159 QAVGSRPYIDTKTPSVRIHAYLTTDEYQYYVDTSGAALYQRGNRGASIEAPLRENLAAGI 218 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + +GWQ G PLLDPMCGSGT L+EAAM+A D APG+ R +GF + W+++K Sbjct: 219 LKLTGWQVGQPLLDPMCGSGTFLLEAAMVALDMAPGIKRE-FGFEKLKTFESDTWKKIKN 277 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 +A ++ +K + YGSD D R ++ + N AG+ E + D+ + P+ Sbjct: 278 QALSKVKKVSFQ---KIYGSDMDLRAVRVTKQNLEAAGLLEAVQVSHVDMLNVIPPVD-- 332 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 +G +++NPPYG R+ + L L+ +G +K++F GWN + + ++L K Sbjct: 333 -HGVLVANPPYGVRIGEDEVLTLLYPKMGETLKHKFAGWNTYFLTNDLRMPKLMRLSPSK 391 Query: 362 QYKAKNGPLDCVQKNYHVAESTPDSKPAMV 391 + NGPL+C + + V Sbjct: 392 KTPLFNGPLECRLFEIKMVAGSNRKDKPEV 421 >UniRef50_Q2YA86 Putative RNA methylase n=3 Tax=Betaproteobacteria RepID=Q2YA86_NITMU Length = 399 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 130/397 (32%), Positives = 205/397 (51%), Gaps = 7/397 (1%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 ++ FA RG+E L ELE LGA GGV F+GD Y++ + SR+ASRI+ Sbjct: 3 LHHFFAPCPRGVESGLVAELECLGASAINPQDGGVEFQGDWDTCYRTNLESRIASRILWR 62 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + +++D+Y + + W + F+P T V+ + + +++ + +K+KD + D F Sbjct: 63 VASEPYATEIDVYKVARQLPWHDWFSPALTIKVNVAAIRCPLQSLDFVTLKIKDGVCDRF 122 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RP+VD PDIR++ +L S+ LD SGD L RG R G AP++E LAA Sbjct: 123 REVAGNRPSVDTVQPDIRIHGFLDARRISLYLDTSGDALFKRGLRKNTGEAPLRENLAAG 182 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 I+ + W+PG PLLDPMCGSGT L+EAA +A + PGL R + F D+ W++++ Sbjct: 183 ILSLADWRPGIPLLDPMCGSGTFLLEAAQIALNIPPGLGRS-FAFEKLRIFDKKRWEQIR 241 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 A + + +GSD I A+ N AG+ E +T + +V +L+ P Sbjct: 242 KAAIAGQK---TKSQQPIFGSDLYGNAIAVAQANLSAAGLSEAVTLKQANVLELSAP--- 295 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G +++NPPYG RL + L+ + LG ++K +F GWN + +A P L ++L A Sbjct: 296 ASSGFLVTNPPYGVRLGEQKQLMEFYPKLGDVLKKKFSGWNAYILTADPQLPKLIRLTAS 355 Query: 361 KQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTN 397 ++ NG L+C Y + + Sbjct: 356 RRIPLFNGALECRLLEYKIVSGGMRKTKKTATGEPGR 392 >UniRef50_C9Q0K8 THUMP domain/methyltransferase domain protein n=25 Tax=Bacteroidales RepID=C9Q0K8_9BACT Length = 513 Score = 454 bits (1168), Expect = e-126, Method: Composition-based stats. Identities = 133/412 (32%), Positives = 214/412 (51%), Gaps = 19/412 (4%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 L A T GLE +L EL +GA Q+ + V F GD +Y++ A RI+ P+ Sbjct: 4 ELIAKTFMGLEPVLAKELTQMGANNVQIGRRMVSFTGDKETMYRANFQLHTAIRILKPIA 63 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + K S D+Y +Q I+W++ G TF+V ++ RNS++ KVKDAIVD F Sbjct: 64 KFKAKSADDVYEEIQKIDWSQHIEDGKTFSVDSVVYSEEFRNSRFVTYKVKDAIVDQFRE 123 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + RPN+ PDIR+N+ + + +++LD SG+ LH RGYR + AP+ E LAA ++ Sbjct: 124 RTGKRPNISVSNPDIRLNIHIAEYDCTLSLDSSGESLHRRGYRQESVEAPLNEVLAAGMI 183 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 + +GWQ T +DPMCGSGTL++EAA++A + +PG+ R + F W D+ ++ + + Sbjct: 184 LMTGWQGETDFIDPMCGSGTLVVEAALIARNISPGVFRKNYAFEKWPDFDQELFDNIYND 243 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 E++ H YG D D + + AR N R +G+ + IT E D P K Sbjct: 244 -----DSNEREFTHHIYGYDIDMKAVNTARLNVRASGLTKDITIEQADFKDFKKPENKS- 297 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 +++NPPYGER+ + P L+ + ++G +K+QF G + + S + + L+ + Sbjct: 298 --ILVTNPPYGERIST-PNLLGTYKMIGERLKHQFMGNDAWVLSYREECFDQIGLKPSIK 354 Query: 363 YKAKNGPLDCVQKNYHVAESTPDSKPAMV----------AEDYTNRLRKNLK 404 NG L+C + Y + + + NR +KN + Sbjct: 355 IPVYNGSLECEFRKYAIFDGSLRDFRQEGGVVKTDDEKRQMAEKNRFKKNRE 406 >UniRef50_B8FHN3 Putative RNA methylase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHN3_DESAA Length = 382 Score = 453 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 137/382 (35%), Positives = 213/382 (55%), Gaps = 5/382 (1%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 LF S +R +L EL+ L GV F D Y+ ++WSR ASR+++ + Sbjct: 2 ELFVSCSRKTAPILAEELKGLCIENISESAAGVRFDADLATAYKVILWSRTASRVLMTVA 61 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + K + LY G++ I+WTE + + AV F+ + ++Q+GA +VKDA+VD F + Sbjct: 62 KFKADNQQALYEGIREIDWTEHLDYRKSIAVDFTSTRSALSHTQFGAQRVKDAVVDQFKK 121 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 R V+ + PD+R+NV + + A ++DLSGD LH RGYR G+AP++E LAAAI+ Sbjct: 122 DVGDRLMVNTNRPDVRINVHVQNDEAVASIDLSGDSLHKRGYRLEGGVAPLRENLAAAIL 181 Query: 183 MRSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 +R+GW + G PL+DPMCGSGT +IE A++A + APGL R +GF GW HD+++W Sbjct: 182 LRAGWPEIARTGGPLIDPMCGSGTFVIEGALMAANIAPGLLRNYFGFVGWKGHDKSLWAG 241 Query: 239 VKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 + +A A +G GSD R ++ A+ N AG+ + E +++A+ P+ Sbjct: 242 MVGDASRLAEEGKKRLPP-IVGSDHHPRAVEHAKANVTRAGMTGYVKIEHREMAKARPPM 300 Query: 299 PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 G V NPPYGER+ L AL+ LG ++ +F + ++L + P++ + L Sbjct: 301 KAKMPGLVAVNPPYGERIGESEELAALYKELGSVLSKRFRRYKVALITGHPEVAKNIGLG 360 Query: 359 ADKQYKAKNGPLDCVQKNYHVA 380 K NGP++C Y V Sbjct: 361 KRKASTLFNGPIECKLYRYEVD 382 >UniRef50_B5CV55 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CV55_9BACE Length = 506 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 121/391 (30%), Positives = 213/391 (54%), Gaps = 9/391 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 L A T +GLEE+L EL LGA ++ + V F GD ++Y++ R A RI+ P+ Sbjct: 6 ELIAKTFQGLEEVLAQELTELGASNIEIGRRMVSFTGDKAMMYKANFCLRTAIRILKPIK 65 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + ++Y V++I W + ++F+V ++ R+S++ A KVKDA+VD F Sbjct: 66 HFTAKTADEVYEAVKSIAWENYLDNMSSFSVDAVVFSNEFRHSKFVAYKVKDAVVDYFRE 125 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 K RP++ PD+ +++ + +E ++ALD SG+ LH RGYR AP+ E LAA ++ Sbjct: 126 KTGNRPSIRISNPDLAIHIHIAEEECTLALDSSGESLHRRGYRQEQVEAPLNEVLAAGMI 185 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 + +GW+ L+DPMCGSGT+ IEAA++A + APG+ R +GF W D+ ++ + + Sbjct: 186 LMTGWRGECDLIDPMCGSGTIPIEAALIARNIAPGVFRKEFGFEKWKDFDQDLFDAIYND 245 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 E++ YG D++ + + A+ N + AG+ + + +++ Q P K Sbjct: 246 -----DSQEREFTHKIYGYDNNPKANEIAQHNVKAAGVSKDVILKIQPFQQFEQPAQKS- 299 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 +++NPPYGER+ SE L+ L+ ++G +K+ F G + + S + + L+A + Sbjct: 300 --IIITNPPYGERISSE-DLLGLYQMIGERLKHAFTGNDAWILSYRDECFDQIGLKASIK 356 Query: 363 YKAKNGPLDCVQKNYHVAESTPDSKPAMVAE 393 NG L+C + Y + + + ++ Sbjct: 357 VPLFNGALECQFRKYQLFDGKYKEFRSDNSD 387 >UniRef50_Q7NRS5 Probable oxidoreductase n=1 Tax=Chromobacterium violaceum RepID=Q7NRS5_CHRVO Length = 397 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 141/391 (36%), Positives = 210/391 (53%), Gaps = 7/391 (1%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 +FA RGLE++L EL LGA + GGV F GD RL+ + SR ASR++L L Sbjct: 7 MFAPCPRGLEQILADELLALGAGDIAPADGGVAFAGDARLMMAVNLHSRTASRVLLRLAH 66 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 +++ D+Y +++W F T + G+ +++ Y + VKDAI D F + Sbjct: 67 GGYHAEQDIYRLAMSVDWPRWFEVSRTIKLKADGIAARVKSLDYIGLTVKDAICDRFRQA 126 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 +L RP+VD PD+RVNV+L + A+I LD SG+ L RG+R+ G AP++E LAA I++ Sbjct: 127 HLGRPSVDTRHPDVRVNVFLTADEATIYLDTSGEPLFKRGWREETGEAPLRENLAAGILL 186 Query: 184 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEA 243 +G+ PLLDPMCGSGT L+EAA +A +RAPG R R+GF + D A W++++ +A Sbjct: 187 LAGYDGSQPLLDPMCGSGTFLVEAADIALNRAPGRAR-RFGFEALSSFDSAAWEKLQQDA 245 Query: 244 QTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPY 303 + + S GSD ++ AR N AG+ EL+ DV P + Sbjct: 246 RKAEQPA---SSLAIRGSDRSQAMVNIARANLERAGLAELVEVSAADVTASR---PHAEH 299 Query: 304 GTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQY 363 G ++SNPPYG RL+ + L A + LG +K F GW LFS L ++L ++ Sbjct: 300 GLIVSNPPYGVRLEEQDQLAAWYPELGDWLKAHFAGWTACLFSGDLRLGKLIRLAPKRRT 359 Query: 364 KAKNGPLDCVQKNYHVAESTPDSKPAMVAED 394 NG L C ++ E + + + Sbjct: 360 PLFNGSLQCRLFVINMVEGSARKQKDGDEAE 390 >UniRef50_UPI0000E87EDF Putative RNA methylase:THUMP n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87EDF Length = 378 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 131/385 (34%), Positives = 208/385 (54%), Gaps = 9/385 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 + FAS RGLEE+L+ EL + A + + V GG+ F GD ++Y++ + SR+A+RI+ + Sbjct: 3 HHYFASCPRGLEEVLQQELMEIHANDIKRVDGGMLFSGDKEVLYKANLSSRIATRILCLV 62 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 + ++ D++ ++ WT F T V + + +++ + +++KDA+ D F Sbjct: 63 KQGSYENEDDIFNAALSVEWTTWFALEKTIKVSTTAIQCPLKSIDFMTLRIKDAVCDIFR 122 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 K RP+V+ PDIR++++L K S+ +D SG LH RG+R + APIKE LAA I Sbjct: 123 EKTGKRPDVEVRDPDIRIHLFLEKNNFSLYIDTSGAPLHQRGFRTASVEAPIKENLAAGI 182 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + SGW PG P LDPMCGSGT LIEAAM+A+++APGL+R +GF W D ++ +K Sbjct: 183 IKLSGWNPGEPFLDPMCGSGTFLIEAAMIASNQAPGLNRN-FGFMAWKSFDNILFSTIKK 241 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 + K + YGSD D R I+ ++ N LAG + K +++T P + Sbjct: 242 TYMDQVTK---KDFLKIYGSDKDLRAIRVSKKNLTLAGFENSVQLVCKQFSEITPPYSE- 297 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 G +++NPPYGER+ E L + + +K F GW + + ++L K Sbjct: 298 --GVLVTNPPYGERIGEE--LDSAYPEWATSLKQSFAGWRTYFLTNDFRMPKLMRLSPSK 353 Query: 362 QYKAKNGPLDCVQKNYHVAESTPDS 386 + NG LDC + + Sbjct: 354 KTPLYNGALDCRLFEIKMVAGSNRK 378 >UniRef50_C0DRY4 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DRY4_EIKCO Length = 420 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 141/390 (36%), Positives = 212/390 (54%), Gaps = 7/390 (1%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 +++LFA+ RGLE +L EL+ G GGV +G Y++ + SR ASRI+L Sbjct: 38 IHTLFATCPRGLETILTQELDAQGCTHIAPTDGGVSCQGSLEAAYRANLHSRTASRILLQ 97 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L + S+ D+Y ++I W + F+ G TF + G +++ + A+K+KD + D F Sbjct: 98 LAKQPYRSEDDIYRAAKSIRWEDWFHAGQTFKIKVEGKRARVKSLDFTALKIKDGLCDRF 157 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RP+VD+ P IR++ ++ ++ A+I +D SG+ L RGYR G AP++E LAA Sbjct: 158 RSNQGQRPSVDKSNPHIRIHAFISEQHAAIFIDTSGEALFKRGYRQDTGAAPLRENLAAG 217 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +++ +G+ P DP CGSGTL IEAA++AT RAPGL R R+GF D +WQ ++ Sbjct: 218 LLLLAGYNGSQPFQDPFCGSGTLPIEAALIATRRAPGLER-RFGFEQLDNFDADLWQRLR 276 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 EAQ L + + GSD+D R+IQ A NAR A + I F+V DV P Sbjct: 277 QEAQAAV---LPQAPAPIAGSDTDRRLIQTAAINAREAQVAGHIIFQVADVRDTR---PN 330 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G G +L+NPPYG RL+ L AL+ LG +K + GW L +A D+ ++L Sbjct: 331 GENGILLANPPYGVRLEEVQTLHALYPQLGSWLKQHYPGWLCGLLTADRDMPKLMRLSPK 390 Query: 361 KQYKAKNGPLDCVQKNYHVAESTPDSKPAM 390 ++ NG LDC + + + Sbjct: 391 RKIPLYNGNLDCRLFLLDMVRGSHRTPKVE 420 >UniRef50_UPI00016C3D60 hypothetical protein GobsU_18040 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3D60 Length = 375 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 141/380 (37%), Positives = 217/380 (57%), Gaps = 5/380 (1%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M FA+ ARGLE +L +EL+ LGA + +GGV F+G L+Y++ +W R A R++ P Sbjct: 1 MTRYFATCARGLEPVLASELDALGAEAVEPGRGGVTFQGPPALLYRACLWLRTAVRVLRP 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + E +V++ +LY V++INW + P T AV + + + +SQY A +VKDAI D F Sbjct: 61 VHEFEVHNSDELYDAVRSINWADWMTPDQTLAVDCNVRDSALTHSQYAARRVKDAICDQF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + RP+VD D P I +N+ + K A ++LD S LH RGYR IAP+ E LAA Sbjct: 121 RERVGRRPSVDPDQPMIGLNLHVSKNHAVLSLDSSWSSLHKRGYRPIQTIAPLNEALAAG 180 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +++R+ W TPL+DPMCGSGT +E A +A +R PGL R + F GW D +W ++ Sbjct: 181 LLLRAKWDKNTPLVDPMCGSGTFCVEGAWIALNRPPGLTRKWFAFQGWPDFDRTVWNAIR 240 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 +A+ L E + GSD + I A+ NAR AG+G L+ + ++ + P Sbjct: 241 DDARAAV---LKELPAPICGSDVRSDAISLAQMNARAAGVGHLLNLQKLELREARPP--S 295 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 GT++ NPPYGER+ E LI L++ +G + K + GW L + +++ L ++L+ Sbjct: 296 DVPGTLVCNPPYGERIGEEEELIPLYARIGAVAKEFWPGWRLLVLTSNTMLAKKIRLKVV 355 Query: 361 KQYKAKNGPLDCVQKNYHVA 380 + NG L+C + + Sbjct: 356 HKEPFFNGSLECFLWEFKTS 375 >UniRef50_A0M2L5 Protein belonging to UPF0020-possibly an RNA methylase n=20 Tax=Bacteroidetes RepID=A0M2L5_GRAFK Length = 386 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 125/391 (31%), Positives = 200/391 (51%), Gaps = 8/391 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 + A T G E +L EL +LGA++ + V F GD +Y++ + R A +I+ P Sbjct: 4 YRMIAKTLYGFESILAKELLDLGALDIKEGNRMVSFAGDKGFMYKANLCLRTAIKILKPY 63 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 +V S+ +LY ++ + W + + A+ + ++ +SQY A+K KDAIVD F Sbjct: 64 ESFRVNSEQELYDNIKKLPWEKFLADDGSLAIDSAVHSEIFTHSQYVALKSKDAIVDRFR 123 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 K RP+VD D PD+R+N+ + +++ D SGD LH RGYR IAPI E LAA + Sbjct: 124 EKFGKRPDVDLDFPDLRINIHIENNFCNVSFDSSGDSLHKRGYRTATNIAPINEVLAAGM 183 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 ++ SGW LDPMCGSGT+ IEAAM+A + P L+R + F W DE ++++++ Sbjct: 184 LLMSGWDGQCDFLDPMCGSGTIPIEAAMIACNIPPNLNRKEFAFEKWNDWDEDLYEKIEE 243 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 A + R ++ G D I +A+ N + A + + I E + + K Sbjct: 244 SAMKKVR----DFHFKIKGYDKAPSAIMKAKDNVKNANLSDFIDIEQRSFFESEK--QKE 297 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 Y +L NPPYGERL E + + +G +K + G + + + + + + LRA + Sbjct: 298 GYLHMLFNPPYGERL--EIDIEDFYGKIGDTLKQNYPGTHAWFIATNFEAIKSVGLRASR 355 Query: 362 QYKAKNGPLDCVQKNYHVAESTPDSKPAMVA 392 + K NGPL+ Y + E + Sbjct: 356 KIKLYNGPLEARLLKYVLYEGSKKKSKQENN 386 >UniRef50_B6BTD9 N6-adenine-specific DNA methylase n=1 Tax=beta proteobacterium KB13 RepID=B6BTD9_9PROT Length = 387 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 132/389 (33%), Positives = 198/389 (50%), Gaps = 8/389 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 SLFA+ RGLE+ L E+ +L + +V GGV F G+ ++ + SR A+R++ L Sbjct: 7 SLFATCPRGLEKFLFNEIRSLDGQKIKVHDGGVSFNGNQDSMHSLNLTSRYATRVLKRLS 66 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + S+ DLY + W ++F T V + + ++++ + +K+KDAI D F + Sbjct: 67 YGQFKSENDLYQAAMKVKWDDIFPVNKTIKVSTTSIKTSLKSIDFVTLKIKDAICDVFNQ 126 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 K RPNVD PDI+V+++L K I +D SG L+ RGYR + AP+KE LAA I+ Sbjct: 127 KYKLRPNVDVRDPDIKVHLFLEKNNFIIYIDSSGKPLYQRGYRQKTIEAPLKENLAAGII 186 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 S W PLLDPMCGSGTL IEAAM+A + PG++R +GF W D+ ++ ++K + Sbjct: 187 TLSDWDFKEPLLDPMCGSGTLPIEAAMMALNIYPGMNRT-FGFHHWHDFDKEVFHKIKVQ 245 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 + + E H Y SD D + A TN G+ I + P Sbjct: 246 LKEKQ----IEKELHIYASDIDRQAFNAASTNIDQMGLKPYIRINNRRFETSNAP---ND 298 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 +G ++ NPPYG RLD L+ + L G ++K +F GW S L+L A K+ Sbjct: 299 HGVIVCNPPYGVRLDESEKLLESYQLWGSVLKKEFSGWRAYFISNDIAFPRGLRLSASKK 358 Query: 363 YKAKNGPLDCVQKNYHVAESTPDSKPAMV 391 NG LDC + + + Sbjct: 359 TPLYNGALDCRLFEFVMVTGSNRKLKQEN 387 >UniRef50_Q9KC03 BH1771 protein n=3 Tax=Bacillales RepID=Q9KC03_BACHD Length = 385 Score = 433 bits (1115), Expect = e-120, Method: Composition-based stats. Identities = 117/380 (30%), Positives = 189/380 (49%), Gaps = 8/380 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +L A+ GLE L+ E+++LG + +V G V F D + ++ +W R A R+ L +G Sbjct: 5 TLIATATMGLEALVAREVKDLGYEDVKVENGKVTFTSDVAAIPRANLWLRTADRVKLKVG 64 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 E K + +L+ +++ W ++ A F V + + + VK A+V++ + Sbjct: 65 EFKALTFDELFEKTKSLPWADIIPVHAEFPVIGRSVKSKLFSVSDCQAIVKKAVVESMKK 124 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + R D + P R+ V LHK+ A++ +D SG GLH RGYR AP+KETLAAAI+ Sbjct: 125 RY-KRGWFDENGPLYRIEVALHKDIATLTIDTSGTGLHKRGYRYLHSQAPLKETLAAAII 183 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 M S W+ P DP CGSGT+ IEAAM+ + APG +R + W W + E Sbjct: 184 MLSHWKSDRPFADPFCGSGTIPIEAAMIGQNIAPGFNRE-FVSEQWHWIGSEHWDRAREE 242 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 + A + GSD D R+++ A+ NA AG G+LI+F+ V + K Sbjct: 243 VEDMAN---YDQPLDILGSDIDHRMVELAQNNAMEAGFGDLISFKQMQVTDFRH---KEE 296 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 YG ++ NPPYGER+ + ++ +G + + W++ + ++ RA K+ Sbjct: 297 YGILIGNPPYGERIGEREEVEKMYQKMGEVFREHLETWSIYILTSHEGFEELYGKRATKK 356 Query: 363 YKAKNGPLDCVQKNYHVAES 382 K NG + + Sbjct: 357 RKLYNGNIKTDYYQFFGPRP 376 >UniRef50_B4RPC6 Tou5 n=34 Tax=Proteobacteria RepID=B4RPC6_NEIG2 Length = 380 Score = 430 bits (1107), Expect = e-119, Method: Composition-based stats. Identities = 133/385 (34%), Positives = 209/385 (54%), Gaps = 8/385 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + +LFA+ RGLE +L ELE+LG E + GGV +G Y + + SR A RI+L Sbjct: 4 LYTLFATCPRGLETVLSQELESLGCTEVRAFDGGVSCRGGLEQAYAANLHSRTAGRILLR 63 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L + ++ D+Y + INW F TF V +++ Q+ + VKDA+ DAF Sbjct: 64 LTKGTYRTERDIYKLAKNINWFNWFTLQQTFKVKIEAKRANVKSLQFAGLTVKDAVCDAF 123 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RP+VD+ APD+R++ +L + I +D SG+ L RGYR G AP++E LAA Sbjct: 124 RDIYDARPSVDKAAPDVRIHAFLDERNVEIFIDTSGEALFKRGYRLDTGEAPLRENLAAG 183 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +++ +G+ P DP CGSGT+ IEAA +A RAPG+ R R+GF D+ +W +++ Sbjct: 184 LLLSAGYDGTQPFQDPFCGSGTIAIEAAWIAAGRAPGMMR-RFGFEKLQNFDKTLWADLR 242 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 A+ + R + GSD+ R++Q A NA AG ++++F V D + P Sbjct: 243 RRAEAQTRP----VRAPIAGSDNGRRIVQTALDNAHNAGADDIVSFSVADAQSVR---PN 295 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G G ++SNPPYG RL+ AL AL+ LG +K + GW + +F+ ++ ++L Sbjct: 296 GENGIMVSNPPYGVRLEEVRALQALYPQLGTWLKKHYAGWRVGMFTGDREMPKFMRLLPK 355 Query: 361 KQYKAKNGPLDCVQKNYHVAESTPD 385 ++ NG +DC + + + Sbjct: 356 RKIPLYNGNIDCRLFLIDMVQGSNR 380 >UniRef50_A6T245 N6-adenine-specific DNA methylase n=9 Tax=Betaproteobacteria RepID=A6T245_JANMA Length = 406 Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 123/402 (30%), Positives = 194/402 (48%), Gaps = 20/402 (4%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQ-----VVQGGVHFKGDTRLVYQSLMWSRLASR 56 +S F RGLE L EL + ++ V GGVH G + Y+ + SR+ASR Sbjct: 5 HSYFCPCPRGLEIALAEELNEIALLDKTLKVHTQVPGGVHCSGTLQDAYRINLHSRIASR 64 Query: 57 IMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAI 116 +++ + ++ D+Y A W + F T + + + +R+ ++ +K+KDAI Sbjct: 65 VLMRMAHASYTTENDIYDLTLAQAWEDWFEVDHTIRIDVTAIKSPLRSLEFTTLKIKDAI 124 Query: 117 VDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKET 176 D F RP+VD PD+R+ +L T ++ LD SG+ L RG+R G AP++E Sbjct: 125 CDRFRDIYNRRPSVDTKMPDMRIVGFLDARTFTLYLDTSGEALFKRGWRMETGDAPLREN 184 Query: 177 LAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 LAA ++ SGW+PG L DPMCGSGT+L EAA + PGLHR + F +A +A W Sbjct: 185 LAAGLLRTSGWKPGMTLFDPMCGSGTILAEAAQMLAGIPPGLHRD-FAFEKFAGFSKAEW 243 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 +KA + +GSD ++ R N AGI + + + ++ Sbjct: 244 AAIKAS----VKPNPLPAEPTIFGSDISGDMVAMTRNNLNKAGIRFEVPLKQIEAQEVKA 299 Query: 297 PLPKGPYGTVLSNPPYGERLD--------SEPALIALHSLLGRIMKNQFGGWNLSLFSAS 348 P G +L+NPPYGER+ ++ S G +K +F GW + LF+A Sbjct: 300 P--SETPGVLLTNPPYGERIGVRGDSTVEADDMAKEFFSAFGTTLKQRFAGWKVFLFTAD 357 Query: 349 PDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAM 390 L L+L+ ++ NG L+C + + + A+ Sbjct: 358 LGLPKLLRLKEARKTPFFNGALECRLFRFDMVAGFNRREQAI 399 >UniRef50_Q2L074 Putative methylase n=4 Tax=Bordetella RepID=Q2L074_BORA1 Length = 535 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 127/390 (32%), Positives = 203/390 (52%), Gaps = 11/390 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + +A +GLE+ L E++ LG + Q + G F D + ++ ++SRLA+RI++ Sbjct: 153 IFRCYAPCPQGLEDALTAEMQALGFDDAQAGRAGCGFTSDWSGIQRANLYSRLAARILVQ 212 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 +G + + +L ++ W F P T V S + + + QY ++VKD I D Sbjct: 213 VGAGNLNHEDELLDLAYSVPWENWFGPEDTLRVDTSAIKSPVHSLQYCNLRVKDGICDRL 272 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + RP++D PD RV +++ A++ LD SG+ L RG+R G AP++E LAA Sbjct: 273 RDREGARPSIDTVRPDARVQLFMEGTHATLYLDTSGESLFKRGWRLDKGEAPLRENLAAG 332 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 ++ +GW P PLLDP CGSGT+LIEAA +A PG+ R +GF QHD W+++K Sbjct: 333 MLALAGWDPSAPLLDPFCGSGTILIEAAWIALGVPPGISRP-FGFERMRQHDARRWRDLK 391 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGI-GELITFEVKDVAQLTNPLP 299 +A++R R L + G D D R I+ AR NA A + E I FEV D + P Sbjct: 392 DDARSRIRTQL---ETPLIGYDIDERAIEFARANAERAWLTEETIRFEVGDARHVKAP-- 446 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 G +++NPPYGER++ +K++F GW + S+ L ++L+ Sbjct: 447 -ASQGWIVTNPPYGERMEIADD---FWREWSACLKHEFAGWQAHIISSDMKLPQRMRLKP 502 Query: 360 DKQYKAKNGPLDCVQKNYHVAESTPDSKPA 389 ++ NG LDC + + ++ P+ Sbjct: 503 VRRIPLHNGSLDCRLFAFELVQAGYRDGPS 532 >UniRef50_A0Q0L2 Nucleic acid methylase n=6 Tax=Clostridiales RepID=A0Q0L2_CLONN Length = 384 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 124/391 (31%), Positives = 201/391 (51%), Gaps = 11/391 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 L A++A G+E L+ EL+ LG +V G V + GD + +S +W R A R+ + L Sbjct: 4 YELVATSAFGIEGLVSKELKRLGYKNLKVENGKVTYNGDEECICKSNLWLRCADRVYIKL 63 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 E K + DL+ G + I W+ A F V+ + T+ + K AIV+ Sbjct: 64 AEFKATTFEDLFQGTKRIPWSNFLPEDANFIVNAKSVKSTLFSLSDIQSICKKAIVENLK 123 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 + + + + + ++ LD SGD LH RGYR++ +AP+KETLAAA+ Sbjct: 124 EEYNV-EWFSESGSVYPILISILNDEVTVLLDTSGDALHKRGYREKGSLAPLKETLAAAL 182 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAI-WQEVK 240 V+ S W+ +DP CGSGT+ IEAAM+A + APGL+R + W ++ W++V+ Sbjct: 183 VILSNWRYDRLFIDPFCGSGTIPIEAAMIARNIAPGLNRT-FACENWDFIISSLTWKKVR 241 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 EA + + H +G D D+++I AR NA AG+ + I F+ + V +L+ Sbjct: 242 KEAYEAI---MYDKEYHIFGYDKDSKIIPVARENAVKAGVDDCIHFQTQPVQELSTHY-- 296 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 YGT++ NPPYGERL+ + + AL+ +G++ ++F W+ + ++ D C ++D Sbjct: 297 -NYGTIVCNPPYGERLNEKDEVEALYRDMGKVF-SKFDTWSKFVITSYSDFEKCFGKKSD 354 Query: 361 KQYKAKNGPLDCVQKNYHVAESTPDSKPAMV 391 K K NG + C Y + P M Sbjct: 355 KNRKLYNGRIQCYYYQY-IGPKPPRRNKDMD 384 >UniRef50_C2MBZ0 THUMP domain protein n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MBZ0_9PORP Length = 475 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 128/398 (32%), Positives = 203/398 (51%), Gaps = 11/398 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + + A T GLE +L+ EL LGA Q+ + V ++GD +++Y+S ++ R A +++ P Sbjct: 4 IFPMIAKTLPGLEPVLEQELIALGANNIQIGRRMVSYEGDLKMLYKSNLYLRTALKVLRP 63 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + E LY + +W++ TFAV + T ++S+Y K KDAIVD F Sbjct: 64 IYEFDAEDIDILYTTLLHFDWSQWLTADMTFAVDAVVYSSTFKHSRYVVYKTKDAIVDYF 123 Query: 121 TRKN--LPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLA 178 + RP+V P + ++ + ++ ++ LD SG+ LH RGYR API E LA Sbjct: 124 REQTSGTKRPSVKLSNPQLIFHLHIAEQHVTLCLDSSGESLHKRGYRMEQDRAPINEVLA 183 Query: 179 AAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 A I++++GW L+DP CGSGT L+EAA++AT PG++R + F W D + E Sbjct: 184 AGILLKAGWHGQCDLMDPFCGSGTFLVEAALIATGTPPGIYRESYPFERWPDFDSELCSE 243 Query: 239 VKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 V + + H YGSD + I +A+ N +G+ I V D A P Sbjct: 244 VYND-----DSTERSFDYHIYGSDLSPQAIAKAKRNVTRSGMSRYIDLSVGDFADQHLPH 298 Query: 299 PKG---PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCL 355 P+ P ++ NPPYGERL S+ L L+S++GR +K QF G + + + + Sbjct: 299 PEAETEPKCLLVMNPPYGERL-SDYDLEQLYSMIGRTLKFQFAGAQAWIIAHQVEHFHAI 357 Query: 356 QLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAE 393 L+ D + + NG L C + Y + E +A+ Sbjct: 358 GLKHDLREELYNGSLPCELRGYTLFEGKHKEYKEQIAQ 395 >UniRef50_Q6MPB2 Putative N6-adenine-specific DNA methylase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPB2_BDEBA Length = 374 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 147/380 (38%), Positives = 222/380 (58%), Gaps = 6/380 (1%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M FASTARGL E L+ EL+ LG GGV F+ + Y++ + SRLASRI+ P Sbjct: 1 MPQFFASTARGLVEPLELELKELGLKVTDRYIGGVFFESNWEGCYKANLHSRLASRILKP 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + + Y +LY + ++T+ P T ++ S +R+ ++ AMKVKDAIVD F Sbjct: 61 VLDFTAYQPEELYSQILRHDFTKYIKPTQTISIDASVNESKMRDQRFVAMKVKDAIVDQF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 K RP+VD PD+R++V K ++A+D SGD L RGYR G AP+KE LAA Sbjct: 121 REKFGVRPDVDNTNPDLRIHVRAIKNQFNVAIDTSGDSLFKRGYRKEVGEAPLKENLAAG 180 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 ++ S W +PL+D MCGSGT LIEAAM++ + APG++R +GF W ++E W++V Sbjct: 181 LLRLSEWDRQSPLVDFMCGSGTFLIEAAMMSMNIAPGINRKGFGFQNWLNYEEETWEKVI 240 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 EA + E FYG D D RV+ A+ NA+ AG+ E+I F+ + VA + P+ K Sbjct: 241 QEAMDAEK---EELDFKFYGFDIDKRVLMNAKDNAKRAGVDEVIEFKKESVATVEPPVEK 297 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G ++ NPPYG R+ E L ++ L MK++F GW+ + S + +L++ L+L++ Sbjct: 298 ---GLIIVNPPYGARIGDEDNLRDVYRDLSFTMKHRFKGWDAWILSGNKELIADLKLKST 354 Query: 361 KQYKAKNGPLDCVQKNYHVA 380 +++ NG ++C Y + Sbjct: 355 RKHFVFNGNIECRFLKYSMF 374 >UniRef50_C0YIG9 Probable methylase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YIG9_9FLAO Length = 388 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 116/388 (29%), Positives = 191/388 (49%), Gaps = 9/388 (2%) Query: 6 ASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECK 65 T GLE++L E++ LG ++ V+ +GD +Y+ +R A +I++P+ E K Sbjct: 10 IKTFFGLEQILAEEIKKLGGRNVEIKNRAVNCEGDLGFLYKINYSARTALKILVPIHEFK 69 Query: 66 VYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNL 125 ++ Y + W + +F++ + ++T ++SQ+ +K+KDAIVD F K Sbjct: 70 AFNQHQFYDRLFKFEWDNFMDVDQSFSIDATVNSETFKHSQFVTLKMKDAIVDYFQEKFK 129 Query: 126 PRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRS 185 RPNV+ PDI+ ++ + +E I++D SGD L RGYR G API E LA+ ++ + Sbjct: 130 RRPNVETRNPDIKFHLHIDRELVMISMDSSGDPLFKRGYRREQGEAPINEVLASGMLQLA 189 Query: 186 GWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQT 245 GW LDPMCGSGTLLIEAAM+A D + R R+GF W +D ++ ++K Sbjct: 190 GWDGKGNFLDPMCGSGTLLIEAAMIAMDLPAQIFRKRFGFQNWNNYDADLFAKIKEFRIN 249 Query: 246 RARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGT 305 R + ++ G D DAR++ AR N A + ++I + ++ L Sbjct: 250 RVK----QFDGKIVGYDIDARMLNAARMNVEAAEMEDVIEIKKQNFFDSKKELF---PLL 302 Query: 306 VLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKA 365 ++ NPPY ER+ + +G K + L S+ + + + LR ++ K Sbjct: 303 MVFNPPYDERISINDD--DFYKKIGDTFKTNYPNTLAWLISSDLEAVKKIGLRPSRKIKL 360 Query: 366 KNGPLDCVQKNYHVAESTPDSKPAMVAE 393 NG L+ Y + E T Sbjct: 361 FNGKLETRFLQYEMYEGTKKIHKLEGNN 388 >UniRef50_Q0K713 Predicted N6-adenine-specific DNA methylase n=11 Tax=Burkholderiaceae RepID=Q0K713_RALEH Length = 417 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 125/418 (29%), Positives = 190/418 (45%), Gaps = 34/418 (8%) Query: 2 NSLFASTARGLEELLKTELENLGA----------VECQVVQGGVHFKGDTRLVYQSLMWS 51 + FA RGLE L EL + A Q V GGV+F G+ Y + S Sbjct: 3 QAFFAPCPRGLESALAEELREIAAMPGMAALAPFTVHQEVPGGVNFSGEMAAAYAVNLHS 62 Query: 52 RLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMK 111 R+ASR+++ + + D+Y + + W + F+P + V + +R+ + A++ Sbjct: 63 RIASRVLMRVAARGYRHEDDIYTLARGVRWEQWFSPDESLRVDITSHKSPLRSLNFTALR 122 Query: 112 VKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIA 171 VKD + DA + RP+VD +PD+R+ L + ++ LD +G+ L RG+R G A Sbjct: 123 VKDGVCDALRERVGVRPSVDTASPDVRIYAHLTERDCTLYLDTTGEPLFKRGWRTEKGEA 182 Query: 172 PIKETLAAAIVMRSGWQPGT---PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGW 228 P+KE LAA I+ +GW PG P DPMCGSGT LIEAA +A APG R + F Sbjct: 183 PLKENLAAGILRLAGWVPGQTFRPFYDPMCGSGTFLIEAAQVALGIAPGGSRS-FAFEWL 241 Query: 229 AQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEV 288 D WQ++K++AQ RAR + GSD ++ R N AG+ + Sbjct: 242 KGMDTKAWQKLKSDAQ-RARMLASADELQVVGSDISTDMLAITRANWERAGLPGEARTKQ 300 Query: 289 KDVAQLTNPLPKGPYGTVLSNPPYGERLD-----------------SEPALIALHSLLGR 331 D + P + G +L NPPYGER+ E A S Sbjct: 301 VDARFVQPPFDE--PGLLLMNPPYGERIAVRGQRRLPEEAMPRDEVEEAAANQFASAFAT 358 Query: 332 IMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPA 389 +K F GW +F+ L+L+ ++ NG ++C + + + A Sbjct: 359 TLKQHFAGWQAWVFTGDMGFPRRLRLKESRRTPLYNGNIECRLFRFDMVRGANRAPQA 416 >UniRef50_A8FEF3 Site-specific DNA-methyltransferase (Adenine-specific) n=14 Tax=Bacilli RepID=A8FEF3_BACP2 Length = 384 Score = 423 bits (1089), Expect = e-117, Method: Composition-based stats. Identities = 121/377 (32%), Positives = 188/377 (49%), Gaps = 10/377 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 +L A+ G+E ++ E+ +LG +C V G V F+GD + ++ +W R A RI + + Sbjct: 4 YTLIATAPMGIEAIVAKEVRDLGY-DCTVDNGKVIFEGDALAICRANLWLRTADRIKVQV 62 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 E + +L+ +AI+W +TF V + + + VK AI Sbjct: 63 AEFSAKTFDELFERTKAIDWAAFLPKNSTFPVIGKSVKSQLASVPDCQRIVKKAIAQKLI 122 Query: 122 RKNLPRPNV-DRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + + P+ ++ V L K+ A + LD SG GLH RGYR G APIKETLAAA Sbjct: 123 SSYNIQSEWLEETGPEYKIEVALLKDKAVLTLDTSGVGLHKRGYRMDQGGAPIKETLAAA 182 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +V+ + W P P +DP CGSGT+ IEAAM+ + APG +R + W E +W + + Sbjct: 183 LVLLTNWTPDRPFVDPFCGSGTIAIEAAMIGQNIAPGFNRD-FASESWEWIGEDVWNKAR 241 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 E + +A + H SD D R+I A+ NA AG+ ELI F+ V + Sbjct: 242 HEVEEKAN---YDQPLHIIASDIDHRMIDIAKMNAEEAGLSELIEFKQMQVKDFQTKVD- 297 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 YG ++ NPPYGERL +PA+ ++ +G K+ W++ + ++ C +A Sbjct: 298 --YGVIVGNPPYGERLSDKPAVEKMYQGMGEAFKS-LDTWSIYILTSHEKFEECFGRKAT 354 Query: 361 KQYKAKNGPLDCVQKNY 377 K+ K NG + Y Sbjct: 355 KKRKLFNGFIKTDYYQY 371 >UniRef50_B7GKR8 Predicted N6-adenine-specific DNA methylase n=8 Tax=Bacteria RepID=B7GKR8_ANOFW Length = 379 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 121/375 (32%), Positives = 191/375 (50%), Gaps = 10/375 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +L A+ A GLE ++ E+ LG +CQV G V F D R + ++ +W R A R+ + +G Sbjct: 7 TLIATAAMGLESIVADEVRALGY-DCQVDNGKVMFVADERAICRTNLWLRTADRVKVKVG 65 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 E + + +L+ +A+ W + A F V + T+ + VK AIV+ + Sbjct: 66 EFRATTFDELFEQTKALPWAQFLPVDAQFPVVGKSVKSTLFSVSDCQAIVKKAIVEHLKQ 125 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + R+ V LHK+ A++ +D SG GLH RGYR + G AP+KETLAAA+V Sbjct: 126 HYGV-SWFEETGALFRIEVALHKDVATLTIDTSGAGLHKRGYRVKQGEAPLKETLAAALV 184 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 + W P P +DP CGSGT+ IEAA++ + APG +R + W+ +W E + E Sbjct: 185 RLTNWTPDRPFVDPFCGSGTIAIEAALIGQNIAPGFNRD-FVSEQWSWIPSHLWDEAREE 243 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 A+ AR + H G D D R++ A+TNA+ AG+ +LITF+ V K Sbjct: 244 AEDVAR---YDQPLHIVGFDIDHRMVDIAKTNAQEAGLADLITFKQMQVKDFRT---KEE 297 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 YG ++ NPPY ERL + + L+ +G W++ + ++ +A K+ Sbjct: 298 YGVIVGNPPYSERLGEKEEVEQLYREMGETF-AALDTWSIYILTSHRHFEQLYGKQATKR 356 Query: 363 YKAKNGPLDCVQKNY 377 K NG ++ + Sbjct: 357 RKLFNGFIETQYYQF 371 >UniRef50_B0TF24 Thump domain protein n=33 Tax=Firmicutes RepID=B0TF24_HELMI Length = 388 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 121/391 (30%), Positives = 197/391 (50%), Gaps = 9/391 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 L A+ A GLE ++ EL LG + V G V F+GD R + ++ +W R A R+++ +G Sbjct: 5 ELIATAAFGLEAVVARELRELGYDDQSVEDGRVIFRGDERAICRANLWLRSAERVLVKVG 64 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + +L+ G +A+ W + A F V + + + K AIV+ Sbjct: 65 SFPATTFEELFQGTKALPWPDWLPEKAEFPVEGKSVRSKLFSVSDCQAIAKKAIVEKMKE 124 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + R D P + V L K+ A++ +D SG GLH RGYRD G AP+KETLAAA++ Sbjct: 125 RY-RRSWFDEKGPRYTIEVSLLKDVATLTIDTSGAGLHKRGYRDLVGQAPLKETLAAAMI 183 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 S W+ LLDP CG+GT+ IEAAM+ + APG +R + W Q ++WQ+V+ E Sbjct: 184 QLSFWRHDRVLLDPFCGTGTIPIEAAMIGRNLAPGRNRT-FAAEQWGQIPASLWQQVREE 242 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 A + A + G+D D + AR +AR AG+ I + + +++ + Sbjct: 243 AHSLA---ALDRELRITGTDIDEAALSLARRHARKAGVDNAIHLQRQPMSESRSRF---K 296 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 YG ++ NPPYGERL + L+ +G++ + W+ + ++ P + +ADK+ Sbjct: 297 YGHLICNPPYGERLGERQEVERLYREMGKVF-SALDTWSFYVLTSHPGFEALFGRKADKK 355 Query: 363 YKAKNGPLDCVQKNYHVAESTPDSKPAMVAE 393 K NG + C ++ + + A +E Sbjct: 356 RKLYNGRIQCNYYQFYGPKPPRREEAAETSE 386 >UniRef50_Q3SES4 N6-adenine-specific DNA methylase n=2 Tax=Betaproteobacteria RepID=Q3SES4_THIDA Length = 398 Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 136/388 (35%), Positives = 205/388 (52%), Gaps = 7/388 (1%) Query: 5 FASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGEC 64 FA+ RGLEELL EL GA + + GV F D ++ + SR A+RI+ +G Sbjct: 15 FATCPRGLEELLVAELNAAGAQVVRQLPAGVLFIADAAAEMRANLTSRTATRILRKVGYT 74 Query: 65 KVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKN 124 + + +Y + W E F+ T AV N +++ + +K+KDAI D F + Sbjct: 75 RYKKEEHIYRAALDLPWPEWFDVTKTIAVKVGAQNAPLKSLNFITLKIKDAICDRFREET 134 Query: 125 LPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMR 184 RP+VD ++PD+ V + + + LD SG+ L RG++ A A IKE LAA +++ Sbjct: 135 RERPSVDTESPDVPVYAFFTPDAVTFYLDTSGEPLFKRGFKREASAASIKENLAAGLLLL 194 Query: 185 SGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQ 244 SGW+PGTPLLDPMCG+GT+L+EAA LA +RAPG R + F + D A+WQ +K E + Sbjct: 195 SGWEPGTPLLDPMCGAGTILLEAADLALNRAPGRAR-HFAFEHYRDFDAALWQRIKDETK 253 Query: 245 TRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYG 304 + +G+D D V+ +AR N +AG + I +V D+ L P P G Sbjct: 254 ALEKPL---TKLPIFGADQDRWVLDKARNNLAVAGYADAIELKVSDLLDLKPPTP---VG 307 Query: 305 TVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYK 364 T+++NPPYGER+ L + LLG +K F GW+ + S P L + L+A ++ Sbjct: 308 TIVTNPPYGERIGEAEDLAEWYPLLGDWLKQNFAGWDAWIISGDPLLPKAIGLKASRRIP 367 Query: 365 AKNGPLDCVQKNYHVAESTPDSKPAMVA 392 NG ++ Y + + K A Sbjct: 368 LFNGQIETRFLQYKLIAGSMKVKKPEAA 395 >UniRef50_P50840 Putative RNA methyltransferase ypsC n=152 Tax=Firmicutes RepID=YPSC_BACSU Length = 385 Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats. Identities = 118/377 (31%), Positives = 192/377 (50%), Gaps = 10/377 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 +L A+ G+E ++ E+ +LG C+V G V F+GD + ++ +W R A RI + + Sbjct: 4 YTLIATAPMGIEAVVAKEVRDLGYE-CKVDNGKVIFEGDALAICRANLWLRTADRIKVQV 62 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 K + +L+ +AINW F V + T+ + VK AIV+ Sbjct: 63 ASFKAKTFDELFEKTKAINWRSFIPENGKFPVIGKSVKSTLASVPDCQRIVKKAIVEKLK 122 Query: 122 RKNLPRPN-VDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 ++ + ++ + +V + L K+ A I LD SG GLH RGYR G APIKETLAAA Sbjct: 123 LQSGKANDWIEETGAEYKVEISLLKDQALITLDSSGTGLHKRGYRVDQGGAPIKETLAAA 182 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +V + W P P +DP CGSGT+ IEAA++ + APG +R + W + +W + + Sbjct: 183 LVQLTNWTPDRPFVDPFCGSGTIAIEAALIGQNIAPGFNRD-FVSEDWEWIGKDLWNKAR 241 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 E + +A + + SD D R++Q A+ NA AG+G+LI F+ V T L Sbjct: 242 LEVEEKAN---YDQPLTIFASDIDHRMVQIAKENAEEAGLGDLIQFKQMQVKDFTTNL-- 296 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 +G ++ NPPYGERL + A+ ++ +G+ W++ + +++ + +A Sbjct: 297 -EFGVIVGNPPYGERLGEKKAVEQMYKEMGQAF-EPLDTWSVYMLTSNENFEEAYGRKAT 354 Query: 361 KQYKAKNGPLDCVQKNY 377 K+ K NG + Y Sbjct: 355 KKRKLFNGFIKTDYYQY 371 >UniRef50_C6X0X4 Methyltransferase n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X0X4_FLAB3 Length = 389 Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats. Identities = 114/388 (29%), Positives = 194/388 (50%), Gaps = 9/388 (2%) Query: 6 ASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECK 65 T GLEE+L E+ LG ++ V+ +GD +Y+ +R A +I++P+ K Sbjct: 10 IKTFFGLEEILAEEIRKLGGANVEIKNRAVNCEGDLGFLYKINYSARTALKILIPVLTFK 69 Query: 66 VYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNL 125 + + Y + W + + TFA+ + ++ ++SQ+ + K+KDAIVD F K+ Sbjct: 70 AWDESRFYDKLFDFPWDDYMSVDQTFAIDATVYSERFKHSQFMSQKMKDAIVDYFKFKHR 129 Query: 126 PRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRS 185 RP+V+ PDI+ ++ + +E +I++D +GD L RGYR G API E LA+ ++ + Sbjct: 130 KRPDVNTIDPDIKFHLHIDRELVTISMDSAGDALFKRGYRKEQGEAPINEVLASGMLQLA 189 Query: 186 GWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQT 245 GW LDPMCGSGTLLIEAAM+A D + R ++ F W +DE ++Q++K Sbjct: 190 GWDGKGNFLDPMCGSGTLLIEAAMIAMDLPAQIFRKKFAFQNWKNYDEELFQKIKEVRIN 249 Query: 246 RARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGT 305 R + E++ G D D++++ N A + ++I + +D + L Sbjct: 250 RVK----EFTGKIVGYDVDSQMLNAVHLNIEAAEMEDVIEVKNQDFFESKKELF---PLL 302 Query: 306 VLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKA 365 ++ NPPY ER++ E + +G K + S+ D + LR ++ K Sbjct: 303 MVFNPPYDERIEIEDD--EFYKKIGDTFKKNYPNTLAWFISSDLDAAKKVGLRPSRRIKL 360 Query: 366 KNGPLDCVQKNYHVAESTPDSKPAMVAE 393 NG L+C + + E T + Sbjct: 361 YNGKLECRFLQFEMYEGTKKTHKLTNEP 388 >UniRef50_Q7P2H5 METHYLTRANSFERASE n=10 Tax=Fusobacterium RepID=Q7P2H5_FUSNV Length = 379 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 121/381 (31%), Positives = 188/381 (49%), Gaps = 9/381 (2%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 AST GLE ++K E LG +V G V F+GD + + ++ ++ R + RI + + E Sbjct: 3 FIASTTMGLESIVKDECLGLGFKNIKVFDGRVEFEGDFKDLVKANIYLRCSDRIFIKMAE 62 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVH-FSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 K + +L+ +++INW + + F + S + + + K AIV+ Sbjct: 63 FKALTYEELFQNIKSINWQDYIDEDGEFPISWVSSVKSKLYSKSDIQRISKKAIVEKLKE 122 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 K R + + + HK+ + LD SG+ L RGYR + +APIKETLAAA+V Sbjct: 123 KY-KREIFLENGALYSIKIQCHKDIFIVMLDSSGEPLTKRGYRAQKRVAPIKETLAAALV 181 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 S W+ LLDPMCG+GT+ IEAAM+A + APG +R + W+ D+ +W +++ E Sbjct: 182 YLSKWKADEVLLDPMCGTGTITIEAAMMARNIAPGANRN-FAAEKWSIIDKNLWTDIRDE 240 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 A + Y SD D R I+ A+ NA AG+ E I F+VKD + +P Sbjct: 241 AFSNEDLS---KELKIYASDIDKRSIEIAKENAEKAGVEEDIIFDVKDFKDIESP---AK 294 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 YG ++ NPPYGERL + + L+ G K + W+ + ++ D +A K Sbjct: 295 YGAMIVNPPYGERLMGDEDIEKLYRNFGDFCKKKLSKWSYYIITSYEDFEKAFDKKATKN 354 Query: 363 YKAKNGPLDCVQKNYHVAEST 383 K NG + C Y Sbjct: 355 RKLYNGGIKCYYYQYFGDRKN 375 >UniRef50_Q898M5 Methyltransferase n=2 Tax=Bacteria RepID=Q898M5_CLOTE Length = 380 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 120/385 (31%), Positives = 195/385 (50%), Gaps = 10/385 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 +L A+ GLE+++ EL LG + + G V F+G + MW R A R+++ + Sbjct: 3 YTLIATATFGLEKVVADELRELGYEDLIIENGKVTFQGSEMDIVTCNMWLRTADRVLIKM 62 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 E K S +L+ G + W ++ V + + + K A+V++ Sbjct: 63 AEFKAESFEELFQGTLKVEWGDIIPETGFMHVTGKSVKSKLFSVPDCQSITKKAVVESMK 122 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 RK + D ++ V + K+ ++ LD +G GLH RGYR+ AG AP+KETLAAA+ Sbjct: 123 RKYN-KEMFSEDGATYKIEVAILKDIVTLTLDTTGPGLHKRGYREFAGEAPLKETLAAAL 181 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 V+ S W+P L DP CGSGT+ IEAAM+ + APGL+R + W + +WQ+++ Sbjct: 182 VLLSKWEPSRILADPFCGSGTIPIEAAMIGKNIAPGLNRN-FVSEDWDIIPKNLWQDMRK 240 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 A R + + SD + RV++ AR NA AG+ + I F+ D+ + N K Sbjct: 241 YA----RNSINDKEFRILASDINGRVLKTARDNAEKAGVADYIAFQRMDMKEFRN---KK 293 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 YG +++NPPYGER+ + + L+ +GR + W+ + ++ D +C ++DK Sbjct: 294 RYGFIITNPPYGERIGNAKEVENLYEDMGRTF-QELKDWSYFVITSYEDFENCFGEKSDK 352 Query: 362 QYKAKNGPLDCVQKNYHVAESTPDS 386 K NG + C Y AE + Sbjct: 353 NRKLYNGRIKCYYYQYFGAEPEKNP 377 >UniRef50_B2RJX4 Putative N6-adenine-specific DNA methylase n=2 Tax=Porphyromonas gingivalis RepID=B2RJX4_PORG3 Length = 484 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 136/427 (31%), Positives = 222/427 (51%), Gaps = 20/427 (4%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 + A T GLE++L TEL L A E V + V F+GD R++Y + + R A RI+ P+ Sbjct: 9 MVAKTLYGLEDVLATELTALEAEEVTVGRRMVSFRGDKRMLYLANLRLRTALRILKPVIT 68 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 + ++Y ++ +WT + + TF++ +D+ +NSQY + + KDA+VD F + Sbjct: 69 FHAKTTDEIYERLRLFDWTTVISSDQTFSIDSVVYSDSFKNSQYISYRTKDALVDFFRDR 128 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 RP+V PDI +N+ + E +++LD SG+ LH RGYR AP+ E LAA I++ Sbjct: 129 EGKRPSVRLSNPDILLNIHVSHEEVTLSLDSSGESLHKRGYRVAETTAPLNEVLAAGILL 188 Query: 184 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEA 243 ++GW T L+DPMCGSGT LIEAA++A + APG++R + F WA D ++ E+ + Sbjct: 189 KAGWDGNTDLIDPMCGSGTFLIEAALIACNIAPGIYRRGFAFQRWADFDPDLYDELFHD- 247 Query: 244 QTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPY 303 + YGSD + + AR+N AG+G I+ V + Q P K Sbjct: 248 ----DSAERVFDHIIYGSDILPQAVAAARSNVERAGLGRYISLSVLPMQQRPKPESKA-- 301 Query: 304 GTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQY 363 ++ NPPYGER+ + L++++G +K+ + G + + + P+ + + LR + Sbjct: 302 -MLVMNPPYGERI-KVEDMQQLYTMIGERLKHNYAGCSAWILAFKPEHFNHIGLRQSHRE 359 Query: 364 KAKNGPLDCVQKNYHVAESTPD------SKPAMVAEDYTNRLRKN-----LKKFEKWARQ 412 K NG L+C + Y + E D S+ A + R+ + +K + Sbjct: 360 KLMNGALECELRGYELFEGRRDSFAERKSRRAEGEQGVGRRIDRRDVSAGREKRSNSMDR 419 Query: 413 EGIECYR 419 E YR Sbjct: 420 ENKPPYR 426 >UniRef50_C4ZFU5 Nucleic acid methylase n=25 Tax=Firmicutes RepID=C4ZFU5_EUBR3 Length = 423 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 125/380 (32%), Positives = 188/380 (49%), Gaps = 11/380 (2%) Query: 1 MNSL--FASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIM 58 MN GLE ++K E+ +LG +V G V F+GD + ++ ++ R A R++ Sbjct: 41 MNRFELVVPCHFGLEAVVKREIYDLGYEITRVEDGRVSFEGDAEAICRANIFLRGAERVL 100 Query: 59 LPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVH-FSGLNDTIRNSQYGAMKVKDAIV 117 L +G K + +L+ V+A+ W F V S + + + VK A+V Sbjct: 101 LQVGRFKAATFDELFENVKALPWENYIPKDGRFWVKKASSIKSKLFSPSDIQSIVKKAMV 160 Query: 118 DAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETL 177 + R D V V+L+K+ + LD SGD LH RGYR AP+ ETL Sbjct: 161 ERMKRSYHI-DWFPEDGAQYPVRVFLYKDEVMVTLDTSGDSLHKRGYRLATSKAPLTETL 219 Query: 178 AAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 AA+++M + W L+DP CGSGT IEAAM+A + APG++R S +W Sbjct: 220 AASLIMLTPWHADRILVDPFCGSGTFPIEAAMMAANIAPGMNREFTAESWTNIIPRKLWY 279 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 E EA+ K + G D D V+ AR NA+ AG+ +I F+ + VA L +P Sbjct: 280 EAVQEAEDMIDK---DVQVDIQGYDIDPDVVAAARENAKRAGVEHMIHFQQRAVADLHHP 336 Query: 298 LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 YG ++SNPPYGERL+ + AL AL+S +G K + W++ L ++ D + Sbjct: 337 ---KKYGFIISNPPYGERLEEKSALPALYSQIGEAYK-RLDAWSMYLITSYEDTERYIGR 392 Query: 358 RADKQYKAKNGPLDCVQKNY 377 +ADK K NG + + Sbjct: 393 KADKNRKIYNGMIKTYFYQF 412 >UniRef50_Q11Q19 RNA methylase family protein n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11Q19_CYTH3 Length = 392 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 117/384 (30%), Positives = 189/384 (49%), Gaps = 5/384 (1%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 + + + A L EL E+ NL Q++ G+ +G + M R A++++ L Sbjct: 8 SDILITCAPDLSELTGREINNLAIPIKQILPHGIVVEGTAQTAMYLCMHLRTANKVLFLL 67 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 E K + DLY + I W F+ + F++ N TIR++++ +K KDAI D F Sbjct: 68 KEAKAATPDDLYRVAKNIPWDNFFDNTSYFSIDSFVQNSTIRDTRFANVKCKDAIADYFV 127 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 K RP+ + + ++ + SI LDLSG+ + GYR AP+ ETLAA + Sbjct: 128 EKTTKRPDSGPLRDKVVIFIYWRENDLSIYLDLSGEPISRHGYRLNPWKAPMAETLAAGV 187 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 ++ S W P TP ++PMCGSGTL IEAA++ T + PGL R + F + W+ ++ Sbjct: 188 IITSEWNPTTPFINPMCGSGTLAIEAALIGTHKIPGLVREDYAFQHIHGYVAETWKTMRE 247 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 AQ + L SD D R + A+ NA AG+ LI F + D P+ + Sbjct: 248 MAQQKV---LPALPFKIIASDHDQRALDAAKVNAEKAGVDHLIDFVLSDFQD--TPVEEN 302 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 G V+ NP YGERL E +L+ + +G K + GG+ +F+ + +L + L+ + Sbjct: 303 QAGVVILNPEYGERLGDEESLVLTYKEIGDFFKQKCGGYKGFVFTGNLELAKRIGLKPKR 362 Query: 362 QYKAKNGPLDCVQKNYHVAESTPD 385 + K + ++C Y + T Sbjct: 363 KIKFFSAKIECRLMQYELYSGTKR 386 >UniRef50_B2V4U2 Methyltransferase n=7 Tax=Clostridium RepID=B2V4U2_CLOBA Length = 386 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 113/395 (28%), Positives = 197/395 (49%), Gaps = 10/395 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M +L A++ G+E + EL LG + ++ G V F+GD + + + R A R+++ Sbjct: 1 MYNLIATSTFGIESITAKELRALGYEDLEIENGKVTFEGDEMDIAIANVHLRTADRVLIK 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + E + S +L+ G +++ W E+ V + T+ + VK A++D+ Sbjct: 61 MAEFEATSFEELFQGTKSVKWHEIIPKDGIMHVVGKSVKSTLHSVPDCQSIVKKAVIDSM 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + ++ V + K+ ++ +D +G GLH RGYR+ AGIAP+KETLAA+ Sbjct: 121 SEHYGI-NQFSESGSTYKIEVAILKDKVTLTIDTTGPGLHKRGYRELAGIAPLKETLAAS 179 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +++ S W L+DP CGSGT+LIEAAM+A + APG +R + W+ + VK Sbjct: 180 MLLLSRWNDNFELVDPFCGSGTILIEAAMIALNIAPGCNRN-FVAEEWSDEIRNTFAMVK 238 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 A +K + + + G D D RV++ A NA AG+ + I F+ +D ++ Sbjct: 239 DGA----KKAVKDKEINLIGYDIDYRVLKVAMDNAEKAGVSKYIKFQKRDFMDFSS---S 291 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 +G ++SNPPYGER+ L L+ +G+ MK + W+ ++ ++ L +++ Sbjct: 292 KKHGFMISNPPYGERIGERETLEPLYKYMGQ-MKKKLSEWDFNILTSIEGFEKLLGVKST 350 Query: 361 KQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDY 395 K K NG + C Y + ++ E Sbjct: 351 KNRKLYNGTIRCYYYQYFDNIKIKNPGDTLINELM 385 >UniRef50_B5JRH4 Putative RNA methylase family UPF0020 n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JRH4_9BACT Length = 390 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 109/386 (28%), Positives = 180/386 (46%), Gaps = 7/386 (1%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 ++ + + E+L EL++LG +V GV +GD + R R++ + Sbjct: 5 TILVTCPKACSEILAEELDSLGYKPSSLVSNGVFIEGDYEDCIHLNLTLRTGLRVLWEVD 64 Query: 63 ECKVYSDLDLYLGVQAINWTEMFN-PGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 DLY + W + A ++ S NDT+ N+ + +++KDAIVD Sbjct: 65 NFTARDGEDLYHQAVRMPWEDWIPAEDAYISIVSSVRNDTVVNTNFPNLRLKDAIVDRMR 124 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 RPN + + ++ H+E I LD SG + R YR G AP++E LAA++ Sbjct: 125 EVTGDRPNSGNERDRGVIFLYWHEEEVCIYLDTSGIPISNRNYRAMPGAAPMRENLAASV 184 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + + W +P L+PMCGSGTL IEAA++A+ R + F + + + E++ Sbjct: 185 ISATRWDKASPFLNPMCGSGTLAIEAALMASGVPGQQLRHEFAFQHFKPFNPKRYDEIRK 244 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 E + R L SD D + I+ A TNA+ AG+ LI F V D P Sbjct: 245 EVRKRVPDSL---PFPIIASDIDRQAIRAAETNAKKAGVAHLIEFRVCDFRDAPIP---E 298 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 G ++ NP YGERL + L + +G + K + G+ +F+ + L + L+ + Sbjct: 299 EPGVIVLNPEYGERLGEQRQLEDTYKAIGDLFKKRCPGYWGYIFTGNKTLGKRVGLKTKR 358 Query: 362 QYKAKNGPLDCVQKNYHVAESTPDSK 387 + + NGP++C Y + T + K Sbjct: 359 KIEFYNGPIECRLLEYELYGGTRNPK 384 >UniRef50_C3WCN4 Methyltransferase n=6 Tax=Fusobacterium RepID=C3WCN4_FUSMR Length = 384 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 120/386 (31%), Positives = 189/386 (48%), Gaps = 10/386 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +L AST G+E +++ E LG + G V F+G R + ++ + R A R+ + +G Sbjct: 6 TLIASTTMGVESVVRDECVALGFENVKAFNGRVEFEGTLRDIAKANIHLRCADRVFIKMG 65 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVH-FSGLNDTIRNSQYGAMKVKDAIVDAFT 121 E K + +L+ V+ + W ++ F V S + + + K AIV+ Sbjct: 66 EFKALTFDELFNNVKRLPWGDIIEENGEFPVSWVSSVKSKLFSKSDIQKITKKAIVEKMK 125 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 K + D + + H + + +D SG+ LH RGYR APIKET+AAA+ Sbjct: 126 EKYG-KSYFYEDGAKFAIKIQAHNDVFLVMIDTSGEPLHKRGYRAIKNEAPIKETMAAAL 184 Query: 182 VMRSGWQPGT-PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 V+ S W+ G PL+DPMCG+GTLLIEAAM+A + APG +R + W E W +V+ Sbjct: 185 VLLSRWKGGDLPLVDPMCGTGTLLIEAAMIARNIAPGANRN-FVSEDWKLIPENDWIDVR 243 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 EA + E YGSD DA ++ AR N AG+ + I E ++ + Sbjct: 244 DEAFSMED---YEKEVKIYGSDIDADTVEIARKNIAKAGVEDDIHLECQNFLDMERD--- 297 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 YG +++NPPYG+RL E A+ L+ LLG I + + W+ + ++ +A Sbjct: 298 EKYGALITNPPYGDRLLDEEAVERLYGLLGDICRMRIPKWSYYIITSHKGFEKAFGKKAT 357 Query: 361 KQYKAKNGPLDCVQKNYHVAESTPDS 386 K K NG ++C Y+ + Sbjct: 358 KNRKLYNGGIECHYYQYYGEKDGKKR 383 >UniRef50_C9YEX1 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YEX1_9BURK Length = 448 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 124/421 (29%), Positives = 192/421 (45%), Gaps = 30/421 (7%) Query: 3 SLFASTARGLEELLKTELENLGAVE---CQVVQGGVHFKGDTRLVYQSLMWSRLASRIML 59 +LF A G+EE L E+ + + +GGV + ++SRLA R+++ Sbjct: 29 TLFLPCAAGVEEYLAPEILQITGLPPGCITKQRGGVAVRTGFEHAMLLNLYSRLAQRVLV 88 Query: 60 PLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDA 119 + + S+ DLY + W F P + V + + + + + A+KVKDA+ D Sbjct: 89 LVSYTEYRSEQDLYRAAMQVAWERWFTPRESIKVEVTAQHSPLTSLNFAALKVKDAVCDR 148 Query: 120 FTR-KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLA 178 F RP+V+ PD+R+ L + S+ +D SG+ L RG+R+ G AP+KETLA Sbjct: 149 FREVAGGVRPDVNTQWPDVRIYAHLTTDACSLYIDTSGEPLFKRGWREDKGDAPLKETLA 208 Query: 179 AAIVMRSGWQPGT----PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEA 234 AA++ SGW G PL DP CGSGT++IEAA +A + A G R R+ F + Sbjct: 209 AAMIAASGWASGDDDLLPLYDPCCGSGTVVIEAAQIACNIAAGSLR-RFAFEKYKPFRSE 267 Query: 235 IWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQL 294 W +K EA K + YGSD R++ A NA+ AG+ ++I F D Q Sbjct: 268 EWAAMKKEAADAVVKPEPGQKALIYGSDVSFRMVDFAERNAQRAGVADVIEFRGGDALQR 327 Query: 295 TNPLPKGPY--GTVLSNPPYGER-------------------LDSEPALIALHSLLGRIM 333 P+ G ++ NPPYGER L + + L Sbjct: 328 MPPIDVSETGGGVMVINPPYGERIGIGGVAGEGEGARFGARELAEADDGVDFFNQLASHW 387 Query: 334 KNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAE 393 K + GW + + L S ++L+ ++ NGPL+C + + + A A Sbjct: 388 KKNYSGWTAWMLTPDLKLPSKMRLKESRRVPMWNGPLECRLFKFDMVKGRLAKPAAPEAH 447 Query: 394 D 394 D Sbjct: 448 D 448 >UniRef50_A6NQS7 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NQS7_9BACE Length = 399 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 122/376 (32%), Positives = 181/376 (48%), Gaps = 9/376 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 F T GLE L EL L + + G V G + + + R R++L LG Sbjct: 31 QFFVPTLFGLEGLAADELRRLNLADVRAENGHVLCTGRPGDIPRLNLNLRTGERVLLVLG 90 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 L+ GV+AI W E A F V LN + + VK A+ R Sbjct: 91 SFHTPDFDALFEGVKAIPWEEYLPRTAAFPVKGHSLNSALHSVPACQSIVKKAVAARLGR 150 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + + P ++ + ++TA I LD SG GLH RGYR +AP++ETLAAA+V Sbjct: 151 AYGL-ETLPENGPLFQIQFSIMRDTAMIMLDTSGAGLHKRGYRAVGVVAPLRETLAAAMV 209 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 M S ++ P DP CGSGT+ IEAA++A +RAPGL R + W W + +E Sbjct: 210 MLSQYRGKDPFCDPFCGSGTIAIEAALIARNRAPGLDRS-FSAQKWPWLSSQAWMDAASE 268 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 A + G + +G D D + ++ AR+NA AG+ +++ FEV D + P Sbjct: 269 AMDKEFDGQYD----IWGGDIDPKAVEIARSNAEKAGVDDVVRFEVADATRFHR---SEP 321 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 YG V++NPPYGER+ + L++ G+ ++ GW +S+ S+ + ADK+ Sbjct: 322 YGRVVTNPPYGERIMEKKEAEGLYASFGQAVRGLPAGWRVSVLSSHTEFERTFGRTADKK 381 Query: 363 YKAKNGPLDCVQKNYH 378 K NG + C YH Sbjct: 382 RKLYNGMIKCDLFQYH 397 >UniRef50_Q26FC8 N6-adenine-specific DNA methylase n=20 Tax=Bacteroidetes RepID=Q26FC8_9BACT Length = 388 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 123/390 (31%), Positives = 205/390 (52%), Gaps = 10/390 (2%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 + A T GLEE+L+ EL LGA + V F+GD +Y++ M R A RI++P+ Sbjct: 7 MIAKTLFGLEEVLEKELRQLGATRIEKGVRMVSFEGDLGFMYKANMMLRTAIRILVPIHS 66 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 + +++DLY G+ ++W++ T AVH + + +SQY A+K KDAIVD Sbjct: 67 FRARNEVDLYDGIYQMDWSQYLTAHDTLAVHGTVASQYFNHSQYVALKTKDAIVDQIRNN 126 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 RP+VD PD+R++V ++ + +++D SG+ L RGYR IAPI E LAA +++ Sbjct: 127 TGRRPDVDTKHPDLRISVHINDQKVDVSIDSSGEPLFKRGYRQETNIAPINEVLAAGLIL 186 Query: 184 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEA 243 S W + +DPMCGSGT+ IEAAM+A + AP L+R +GF W +D A+++ + Sbjct: 187 LSDWDQRSQFIDPMCGSGTIAIEAAMIAANIAPNLNRPEFGFEKWPNYDNALFEMI---- 242 Query: 244 QTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPY 303 Q K + E+ D+D +++A+ N + A + + I E D + Sbjct: 243 QESCLKKMREFEGPIIARDADGYTLEKAKENVKNANLQDFIKLEKGDFFRDHQ----SAQ 298 Query: 304 GTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQY 363 ++ NPPY ER++ + A + +G +K ++ G + + + D L + LR ++ Sbjct: 299 AFLMFNPPYDERIEIDTD--AFYKSIGDALKQRYTGSTAWMITGNLDALKSVGLRPSRKI 356 Query: 364 KAKNGPLDCVQKNYHVAESTPDSKPAMVAE 393 K NG L+ Y + T + ++ Sbjct: 357 KVYNGKLEARFVKYEMYRGTKKLHKLVDSD 386 >UniRef50_Q1DCA8 THUMP domain/methyltransferase domain protein n=2 Tax=Cystobacterineae RepID=Q1DCA8_MYXXD Length = 433 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 136/388 (35%), Positives = 196/388 (50%), Gaps = 8/388 (2%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 LFA+ ARG E+LL EL+ LGA + +GGV F +WSR+A R++ PLG Sbjct: 22 LFATAARGTEDLLADELKELGARRIRQDRGGVRFMATLDEALMVALWSRIAMRVLYPLGA 81 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 + LY +I W E P TFAV + + +S + A+KVKDAIVD Sbjct: 82 FEARGAEGLYEAAASIPWEEHLTPEHTFAVDATLKDSEHSHSGFVALKVKDAIVDRMRDT 141 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 RP+V+ PDIRV L +ET S++LDL G+ LH RGYR R AP+KETLAAA++ Sbjct: 142 KGARPDVNTRDPDIRVVAHLARETLSLSLDLCGEPLHRRGYRVRPTPAPLKETLAAAVLR 201 Query: 184 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEA 243 + + L+DPMCGSGTLLIEA ++A RAPGL+R + W + +E+ A+ Sbjct: 202 AANYTGTEGLVDPMCGSGTLLIEAGLIARRRAPGLNRD-FAVERWPELGTRA-RELLADM 259 Query: 244 QTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPY 303 + AR+ + G D D ++ A N R A + E I D +L P Sbjct: 260 RADARRNERKVEVPLLGFDKDPEALEAASRNVRAARLTEEIQLAEGDATRL--PPLPETG 317 Query: 304 GTVLSNPPYGERLDS--EPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 G +++NPPYG+RL + + + + + LG ++ GW + + +P S R Sbjct: 318 GLIVTNPPYGDRLGTGGQKGMKSFYFKLGESLR--VPGWRVWVICGNPAFESAFHARPSA 375 Query: 362 QYKAKNGPLDCVQKNYHVAESTPDSKPA 389 + NGP+ C Y + Sbjct: 376 KRDLWNGPIACSLLGYRPPDGGSARGDT 403 >UniRef50_D1RAW3 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RAW3_9CHLA Length = 383 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 128/380 (33%), Positives = 193/380 (50%), Gaps = 8/380 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFK-GDTRLVYQSLMWSRLASRIMLPL 61 LF + ++GLE LL EL+ L GV K D +Y+ SR+ASR++ PL Sbjct: 10 ELFVTCSQGLEPLLIEELQELSFENAHPGFRGVFVKIKDLSDIYRINYNSRIASRVLFPL 69 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 Y LY G NW F G TFA+ + + IRNS + A VKDAI D Sbjct: 70 TTFNCYDQKALYRGASQFNWIPFFRKGMTFAIDSNVNHRLIRNSLFAAQVVKDAICDQLR 129 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 K RPN+D PDI++N+++ TA ++LD SG LH RGYR + AP++E LAAAI Sbjct: 130 EKFGERPNIDVKNPDIQLNLFIQGNTAILSLDTSGAPLHKRGYRLDSVEAPMQENLAAAI 189 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + + ++ + DP CGSGTLLIEAA++A+ PG R WGF + + + W +VK Sbjct: 190 LRLANYKKEEIMCDPCCGSGTLLIEAALMASQTPPGFLRKDWGFMRFPEFSASDWLKVKM 249 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 EA + + H +G + + ++ ++TN R AG I D + T P Sbjct: 250 EADQKRQPI---PKGHLFGVEINKNAVRVSKTNIRAAGFLSEIEVVQGDFREWT---PSV 303 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGG-WNLSLFSASPDLLSCLQLRAD 360 +++NPP+G+RLD L L+ +G MK + +F+ + DL + L A Sbjct: 304 LPTLLVTNPPHGKRLDFAEDLRPLYRSIGDFMKQKMAKPARGFVFTGNLDLTKEVGLAAK 363 Query: 361 KQYKAKNGPLDCVQKNYHVA 380 +++ +G ++ + V Sbjct: 364 RRHVLHSGGVESRLLEFDVY 383 >UniRef50_Q311V9 Putative uncharacterized protein n=2 Tax=Desulfovibrio RepID=Q311V9_DESDG Length = 393 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 103/384 (26%), Positives = 175/384 (45%), Gaps = 3/384 (0%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 +++ + LL TEL+ LG + GV + D + + R A+R++ + Sbjct: 8 STVLVTCPLAASALLATELKALGFTPRNELPAGVEVQADLNDCMRMNLHLRTANRVLYQV 67 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 + LY I+W P ++ S N TIR+S++ ++KDA+VD Sbjct: 68 AAFRARDADALYRAASRIHWELFIAPEGYVSIASSVDNPTIRDSRFANQRLKDAVVDRIR 127 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 + RP+ + + + H + + +D SG+ L RGYR AP++ETLAAA+ Sbjct: 128 SRTGRRPDSGPLQTGVVLFLHWHDDWCRLYVDTSGEPLSRRGYRKNPWKAPMQETLAAAV 187 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 +M +GW G L++PMCGSGTL +EA ++A + APGL R + F + IW + Sbjct: 188 LMAAGWPGGGHLINPMCGSGTLAVEAVLMAMNSAPGLLRDSFCFMHLPGYKPEIWDALLD 247 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 A+ + E +D ++ ++ NA AG+ I F V D Q P P Sbjct: 248 RAEAQE---TGEIPGRVIATDIVPEAVKASQENAVRAGVAGFIEFGVCDFTQTDIPQPSE 304 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 ++ NP YG RL L ++ +G K + GG+ +F+ + L + LR + Sbjct: 305 GRDVIIMNPEYGARLGDAAQLEGVYRAVGDFFKQRCGGYTGYVFTGNMKLAGNVGLRTSR 364 Query: 362 QYKAKNGPLDCVQKNYHVAESTPD 385 + + ++C Y + + Sbjct: 365 RIPFHSAKIECRLLEYELYSGSRK 388 >UniRef50_A9KSV9 Putative RNA methylase n=26 Tax=Bacteria RepID=A9KSV9_CLOPH Length = 380 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 114/378 (30%), Positives = 181/378 (47%), Gaps = 11/378 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 A GLE +LK E+ +LG V G V F GD + ++ M+ R RI++ + Sbjct: 4 YEYIAPCHFGLEAVLKREITDLGYEIVSVEDGRVIFAGDETAICRANMFLRTTERILIKV 63 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAV-HFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + K + +L+ + + W + F V + + + + +K A+V+ Sbjct: 64 AKFKAETFEELFQNTKEVPWEQYIPKDGKFWVAKATSIKSKLFSPTDIQSIMKKAMVERL 123 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + + V V K+ +I +D SG LH RGYR API ETLAAA Sbjct: 124 KGVY-KVEWFEESGNEYPVRVTFMKDEITIGIDTSGVSLHKRGYRKLISKAPITETLAAA 182 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQ-HDEAIWQEV 239 ++M + W L+DP CGSGT IEAAM+ APGL+R + W + W E Sbjct: 183 LIMLTPWNKDCVLIDPFCGSGTFPIEAAMIGARIAPGLNRS-FLAENWTDLIPKKAWYEA 241 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 EA L + + G D D VI+ A+ NA +AG+ + I F+ + V++L++P Sbjct: 242 AEEANGMI---LHDIEMNIQGYDIDGEVIKAAKQNAEVAGVDQYIHFQKRSVSELSSP-- 296 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 YG +++NPPYGERL+ + A+ ++ +G+ MK + W+ L ++ D + +A Sbjct: 297 -KKYGFIITNPPYGERLEDKSAMPPIYHEIGQAMK-RLDTWSSYLITSYEDAEKHIGRQA 354 Query: 360 DKQYKAKNGPLDCVQKNY 377 D+ K NG L Y Sbjct: 355 DRNRKIYNGMLKTYFYQY 372 >UniRef50_Q2LXZ8 Predicted N6-adenine-specific DNA methylase n=3 Tax=Bacteria RepID=Q2LXZ8_SYNAS Length = 406 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 114/396 (28%), Positives = 189/396 (47%), Gaps = 6/396 (1%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + + + +G+ LK E+E+L + + +G + + R R++ Sbjct: 12 FSRILVTCPKGIAPYLKNEIESLDFPVDYEREAAILTEGTLEDSLRLNLHLRTGHRVLYL 71 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L E V +LY + ++W + + V + + +IR++++ K KDAIVD Sbjct: 72 LAEGAVNDPNELYRWIAGLSWESILHEDGYLCVTSTVDHPSIRDTRFANQKCKDAIVDRL 131 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 R RP+ V+++ A + LD SG+ L RGYR AP++ETLAAA Sbjct: 132 QRICGRRPDSGPARDRAVVHLFWKGTRAQLYLDTSGEPLSRRGYRKIPVQAPMQETLAAA 191 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 IV+ +GW P ++PMCGSGT+ IEAA++A +RAPGL R +GF A+W+E++ Sbjct: 192 IVLATGWNGKGPFVNPMCGSGTIAIEAALIALNRAPGLLRSNFGFRHIKGFPAALWKELR 251 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 +AQ +A + +D D R I A NA AG+ I V D + P Sbjct: 252 RKAQEKA---ARRFPGQIIATDMDRRAIAAAEQNAVNAGVQNWIRLAVCDYTETDIPP-- 306 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G V+ NPPYGERL + L ++ +G +KN G+ +F+ + +L + L+ Sbjct: 307 -EAGIVIMNPPYGERLGNVQKLEKTYAGMGNFLKNACPGYRGFIFTGNIELARKVGLKTR 365 Query: 361 KQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYT 396 ++ N ++C Y + E + + E+ Sbjct: 366 RRLVFFNSGIECRLLEYELYEGSYRDRMPPKEEELR 401 >UniRef50_A6EAV4 Predicted N6-adenine-specific DNA methylase n=5 Tax=Sphingobacteriales RepID=A6EAV4_9SPHI Length = 393 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 123/387 (31%), Positives = 191/387 (49%), Gaps = 5/387 (1%) Query: 5 FASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGEC 64 + + L L+ E++ LG + GV + + R AS+I+ L Sbjct: 11 ILTCNKRLSSYLQEEVKALGYSIVRDFPTGVELNITLTECIKLNLNLRCASQILYCLKSF 70 Query: 65 KVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKN 124 K + +LY + + W E+ + F+V + N TI + +KVKDAIVD K Sbjct: 71 KANNPEELYQELVQMPWEELIDFAGYFSVTSNVDNPTITTPLFANLKVKDAIVDRIKDKK 130 Query: 125 LPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMR 184 RPN DA V+++ A I LD SG+ L GYR G AP+ E LA++++ Sbjct: 131 GIRPNSGSDANKAVVHLYWKDSEADIFLDTSGETLAKHGYRKIPGKAPMLEALASSVIFS 190 Query: 185 SGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQ 244 +GW +P ++PMCGSGTL IEAA++AT+R PGL+R +GF +DE ++ AE + Sbjct: 191 TGWDQKSPFVNPMCGSGTLAIEAALIATNRRPGLYRMNYGFMHILGYDEEVF---FAERR 247 Query: 245 TRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYG 304 + + +D + +R NA+ AG+ LI+FEV D A +P+G G Sbjct: 248 ILKEQVVKNTDIQIIATDISEDAVDVSRKNAKTAGVDGLISFEVCDFAD--TVVPEGGRG 305 Query: 305 TVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYK 364 V+ NP YGERL L + +G MK G++ +F+ +PDL + L+A ++ + Sbjct: 306 VVIFNPEYGERLGVHSKLELTYKRMGDFMKQHCKGYSGYIFTGNPDLAKKIGLKAARKIE 365 Query: 365 AKNGPLDCVQKNYHVAESTPDSKPAMV 391 NG LDC Y + + T + Sbjct: 366 FYNGKLDCRMLEYELYDGTRRTDTRED 392 >UniRef50_C3JC56 RNA methylase family protein n=2 Tax=Bacteria RepID=C3JC56_9PORP Length = 493 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 135/399 (33%), Positives = 205/399 (51%), Gaps = 11/399 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 ++S A T GLE++L ELE LGA + +V + V F+GD R++Y + R A RI+ P Sbjct: 22 LSSYVAKTLYGLEDVLADELEALGAYDIEVGRRMVRFRGDKRMLYLTNYRLRTALRILKP 81 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + E S DLY ++ W + TF + +D NS+Y + +VKDAI D F Sbjct: 82 IYEFNCESIEDLYETLRQFEWAQYIRCDQTFLIDPVVYSDRFSNSRYVSYRVKDAIADYF 141 Query: 121 TRKN--LPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLA 178 RP+V D PD+R N+ + + +++LD SGD LH RGY+ + AP+ E LA Sbjct: 142 VANTPDGKRPSVRMDTPDVRFNIHIAQRHVTLSLDSSGDSLHKRGYKVKQTPAPLSEVLA 201 Query: 179 AAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 A I++++GWQ L+DPMCGSGT IEAA++A A G R ++ F WA D +W+E Sbjct: 202 AGILLKAGWQGQCDLIDPMCGSGTFAIEAALIARGVAAGAWRTKYAFEEWADFDADLWRE 261 Query: 239 VKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 V+ + + H Y SD N + G+G IT E + + P Sbjct: 262 VQEDPNFE-----TPFEHHIYASDIANDAYTVTNANVQHMGLGHDITVEHMAMQRRNAP- 315 Query: 299 PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 ++ NPPYGERL + L AL+S++G +K+++ G + + + L + LR Sbjct: 316 --EAPVLMVLNPPYGERL-TRFDLEALYSMIGSELKHKYTGSKVWIIAPKSKLFHAIGLR 372 Query: 359 ADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTN 397 + NG L+C ++Y + E D +AE T Sbjct: 373 HSSRLDLLNGDLECELRSYELFEGKRDDFKRDLAEGKTR 411 >UniRef50_B1CAN9 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CAN9_9FIRM Length = 375 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 122/381 (32%), Positives = 196/381 (51%), Gaps = 11/381 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 ++ A+ GLE++LK E+ +LG +V G V+FKG+ + V + + R A R+++ + Sbjct: 5 TIVATCTFGLEKVLKREVTDLGYEIDKVEDGKVYFKGNKKDVMNANLHLRTAGRVLIFIT 64 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATF-AVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 YS DL+ V++ W ++F A F A S + + + + VK AIV+ Sbjct: 65 TFDAYSFDDLFDNVESYPWEDIFEKNAGFNATKISSVKSKLFSKRDIQKIVKKAIVERLK 124 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 RK + + V + K+ SI ++ SG GLH RGYR+ A AP+KETLA+ I Sbjct: 125 RKY-KLNKLSESGSYYELIVNIKKDKVSIFINTSGKGLHKRGYRENALKAPLKETLASGI 183 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 ++ SG++ P D MCGSGT++IEAAM A + APGL+RG + F W ++ ++ +K Sbjct: 184 ILLSGYRGDRPFSDVMCGSGTIVIEAAMKAKNIAPGLNRG-FAFEKWKEYSSKDFELLKE 242 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 EA+ + G+D D R I+ A NAR AG+ + + F+ D+ + + + Sbjct: 243 EARAEIKPA----EVRLLGNDIDYRAIKLANENARKAGVEDAVAFQKMDMKEFRS---RK 295 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 G ++ NPPY ER+ +E +I L+ G+ M W L + A P +AD+ Sbjct: 296 KNGLMIVNPPYAERIGNEAEVIQLYKDFGK-MYENLEDWKLFVLCAHPMFQKYFGEKADR 354 Query: 362 QYKAKNGPLDCVQKNYHVAES 382 K NG + C Y+ Sbjct: 355 NRKLFNGNMLCYLYQYYPKRK 375 >UniRef50_C0QBT1 Putative RNA methylase family protein n=2 Tax=Deltaproteobacteria RepID=C0QBT1_DESAH Length = 403 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 124/378 (32%), Positives = 183/378 (48%), Gaps = 7/378 (1%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 + F A L + EL+ LGA + G++FK + Y+ +RL SRI+ PL Sbjct: 33 TFFGQIAEDLINEGEAELKQLGATDVTPSFRGIYFKAEKETFYRINYQTRLFSRILAPLT 92 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + LY + I W +F +TFA+ + + I +SQY +++KDAI D F Sbjct: 93 SFACNNTDTLYKQAKKIKWENLFKKKSTFAITSNVSDSEITHSQYAGLRLKDAIADYFRE 152 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + RP+V+ PD+ +N+ + KETA I++D SG LH RGYR+ + AP++ET+AAAI+ Sbjct: 153 RTGKRPDVNTLDPDVMINLHIRKETADISIDASGGALHKRGYREESVTAPMQETIAAAII 212 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 SGW PL DPMCGSGTLL EA M G+ R R+GF + +W +VK E Sbjct: 213 RISGWDGTRPLYDPMCGSGTLLCEALMHQCHIPAGIFRQRFGFEILPDFNPDLWNQVKTE 272 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 A + GSD + ARTN G ++ D Q+ Sbjct: 273 ANAGI---IPIAQGLIAGSDIAESSVTAARTNLMGLHNGGQVSVLNMDFRQIQALEDT-- 327 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 +++NPPYG R+ E L H LG +K + G ++ P + + L+A + Sbjct: 328 --IIVANPPYGIRMGKESDLKVFHRELGDFLKQRCKGSTAYIYFGDPQYVGHMGLKATWK 385 Query: 363 YKAKNGPLDCVQKNYHVA 380 K G LD Y + Sbjct: 386 RPLKAGGLDGRLVKYEMY 403 >UniRef50_C5WIH5 Methyltransferase n=45 Tax=Firmicutes RepID=C5WIH5_STRDG Length = 384 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 119/378 (31%), Positives = 192/378 (50%), Gaps = 12/378 (3%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 L A+ A GLE ++ E+ LG +CQV G V+F+GD + ++ +W R A R+ + +G+ Sbjct: 7 LVATAAAGLEAVVGKEVRALGF-DCQVENGKVYFEGDLEAIAKTNLWLRAADRVKIIVGQ 65 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAV-HFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + +L+ GV A++W GA F + + + N K A+V + Sbjct: 66 FPARTFEELFQGVFALDWENYIPLGAKFPISKAKCVKSKLHNEPSVQAITKKAVVKKLQK 125 Query: 123 KNLPRPNVDRD--APDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 V + + V + K+ A++ +D +G L RGYR + G APIKE +AAA Sbjct: 126 YFHRPEGVPLQEVGSTVNIEVSILKDQATVMIDTTGSSLFKRGYRVQKGGAPIKENMAAA 185 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 I+ S W P PL+DP CGSGT IEAA++ + APG +R + F W+ D+ I Q+V+ Sbjct: 186 ILALSNWFPDKPLVDPTCGSGTFCIEAALIGMNIAPGFNRS-FAFEEWSWVDKEIIQKVR 244 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 EA+ AR + G D D+R+I+ A++NA AG+ ++ITF+ + Sbjct: 245 DEAEQEAR---YDAELDISGFDIDSRMIEIAKSNAEEAGLSDVITFKQMRLQDFRTDKVN 301 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G ++SNPPYGERL + A+ L++ +G+ W+ + ++ AD Sbjct: 302 ---GVIISNPPYGERLLDDKAVDILYNEMGQTF-APLKTWSKFILTSDEQFEKKYGQTAD 357 Query: 361 KQYKAKNGPLDCVQKNYH 378 K+ K NG L ++ Sbjct: 358 KKRKLYNGTLRVDLYQFY 375 >UniRef50_C1CIN4 Methyltransferase n=129 Tax=Bacilli RepID=C1CIN4_STRZP Length = 385 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 127/389 (32%), Positives = 192/389 (49%), Gaps = 12/389 (3%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +L A+ A GLE ++ E+ LG +CQV G V F+GD R + ++ +W R A RI + +G Sbjct: 6 NLIATVAAGLEAVVGREVRELGY-DCQVENGRVRFQGDVRAIIETNLWLRAADRIKIIVG 64 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAV-HFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 + +L+ GV A++W GA F + + + N K A+V Sbjct: 65 TFPAKTFEELFQGVFALDWENYLPLGARFPISKAKCVKSKLHNEPSVQAISKKAVVKKLQ 124 Query: 122 RKNLPRPNVD--RDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAA 179 + V + P+ ++ V + K+ A++ +D +G L RGYR G APIKE +AA Sbjct: 125 KHYARPEGVPLMENGPEFKIEVSILKDVATVMIDTTGSSLFKRGYRTEKGGAPIKENMAA 184 Query: 180 AIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 AI+ S W P PL+DP CGSGT IEA M+A APGL R + F W + + QEV Sbjct: 185 AILQLSNWYPDKPLIDPTCGSGTFCIEAVMIARKMAPGLRRS-FAFEEWNWISDRLIQEV 243 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 + EA A+K E G D DAR+++ A+ NA+ AG+ ITF+ V L + Sbjct: 244 RTEA---AKKVERELELDIMGCDIDARMVEIAKANAQAAGVAGDITFKQMRVQDLRSDKI 300 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 G ++SNPPYGERL + + L++ +G++ W+ + ++ S +A Sbjct: 301 N---GVIISNPPYGERLSDDAGVTKLYAEMGQVF-APLKTWSKFILTSDEAFESKYGSQA 356 Query: 360 DKQYKAKNGPLDCVQKNYHVAESTPDSKP 388 DK+ K NG L Y Sbjct: 357 DKKRKLYNGTLKVDLYQYFGQRVKRQEVK 385 >UniRef50_A1V086 THUMP domain protein n=52 Tax=Burkholderia RepID=A1V086_BURMS Length = 430 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 131/427 (30%), Positives = 195/427 (45%), Gaps = 39/427 (9%) Query: 1 MNSLFASTARGLEELLKTELENLGAVEC-------QVVQGGVHFKGDTRLVYQSLMWSRL 53 + FA RGLE L EL + A V GGVHF+G + + SR+ Sbjct: 6 LFDFFAPCPRGLEAALAAELAQIAARHAIAPYDAGAQVPGGVHFRGAWAAGMAANLHSRI 65 Query: 54 ASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVK 113 ASR++L + ++ D+Y W F T V + + +++ ++ ++VK Sbjct: 66 ASRVLLKIAHRPYRNEQDVYALALEQPWERWFASTQTLRVDITAIKSPLKSLEFATLRVK 125 Query: 114 DAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPI 173 DAI D K RP++D PD+RV +L ++ LD SG+ L RG+R G AP+ Sbjct: 126 DAICDRLREKTGARPSIDTAQPDVRVFAFLTAGDCTLYLDTSGEPLFKRGWRLDKGAAPL 185 Query: 174 KETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDE 233 +E LAA I+ +GW PGTPL DPMCGSGT + EAA +A APG+ R R+GF Q+D Sbjct: 186 RENLAAGILRLAGWTPGTPLYDPMCGSGTFVAEAAQIALGVAPGVER-RFGFEKLKQYDI 244 Query: 234 AIWQEVKAEAQTRARKGLAEY-SSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVA 292 WQ +K A R + +GSD ++++AR N AG+ L + D Sbjct: 245 TAWQTLKVAAMDAKRAARGKRDDLLIFGSDISGDMLEKARANLERAGVPSLW-LKQIDAR 303 Query: 293 QLTNPLPKGPYGTVLSNPPYGERL------------------DSEPALI---------AL 325 +T P G +++NPPYGER+ + A Sbjct: 304 NMTPPA--AAPGVIVTNPPYGERIEVRGRGPRGDVRETGKNRGGDEAFRRTHADSPDSEF 361 Query: 326 HSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPD 385 LG +K +F GW + S+ L L+LR + NG L+C + + + Sbjct: 362 FRALGDALKQRFAGWQAFMLSSDRTLPGQLRLRESAKTPLFNGALECRLFRFDLIAGSIR 421 Query: 386 SKPAMVA 392 +PA Sbjct: 422 QRPAAAD 428 >UniRef50_C5AB46 Predicted N6-adenine-specific DNA methylase n=3 Tax=Burkholderia RepID=C5AB46_BURGB Length = 435 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 137/429 (31%), Positives = 200/429 (46%), Gaps = 40/429 (9%) Query: 1 MNSLFASTARGLEELLKTELENLGAVEC--------QVVQGGVHFKGDTRLVYQSLMWSR 52 + FA RGLE L EL +GA V GGVHF+G + + SR Sbjct: 5 LFDFFAPCPRGLEAALAAELAEIGARRIAGAPFEAGTQVPGGVHFRGGWMAGMAANLHSR 64 Query: 53 LASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKV 112 +ASR++L + + S+ D+Y W F T V + + +++ ++ ++V Sbjct: 65 IASRVLLKIADRPYRSEQDVYALALEQQWERWFAATQTLRVDVTAIKSPLKSLEFATLRV 124 Query: 113 KDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAP 172 KDAI D K RP++D PD+RV +L ++ LD SG+ L RG+R G AP Sbjct: 125 KDAICDRLREKTGARPSIDTAQPDVRVFAFLTATHCTLYLDTSGEPLFKRGWRLDKGAAP 184 Query: 173 IKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHD 232 ++E LAA I+ +GW P PL DPMCGSGT L EAA +A D APG+ R R+GF Q+D Sbjct: 185 LRENLAAGILRVAGWTPAVPLYDPMCGSGTFLAEAAQIALDVAPGVER-RFGFEKLKQYD 243 Query: 233 EAIWQEVKAEAQTRARKGLAEYSS-HFYGSDSDARVIQRARTNARLAGIGELITFEVKDV 291 WQ +K A R +++ YGSD ++ +AR N AG+ I+ + D Sbjct: 244 ITAWQTLKVAAMDAKRAARGRHAALPVYGSDISGDMLDKARANLERAGVP-AISLKQVDA 302 Query: 292 AQLTNPLPKGPYGTVLSNPPYGERL------------------DSEPALI---------A 324 + P G +++NPPYGER+ ++ A Sbjct: 303 RFMAPPTDT--PGLIVANPPYGERIEVRGRGPRGDARETGRNRGNDDAFRRTHTDAPDGE 360 Query: 325 LHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTP 384 LG +K +F GW L S+ L L+LR + NG L+C + V + Sbjct: 361 FFIALGNALKQRFAGWQAFLLSSDRSLPGQLRLRESAKTPLFNGALECRLFRFDVVAGSV 420 Query: 385 DSKPAMVAE 393 +PA AE Sbjct: 421 RQRPAQGAE 429 >UniRef50_A6DTJ8 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTJ8_9BACT Length = 387 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 130/367 (35%), Positives = 185/367 (50%), Gaps = 7/367 (1%) Query: 18 TELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQ 77 EL+ LGA E Q G+HF D +++ + SRL SR + PL S+ LY V+ Sbjct: 26 DELKELGAQEIQQDYRGMHFHADMVTLFKIVYCSRLFSRFLAPLHRFDALSEDMLYQRVK 85 Query: 78 AINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDI 137 + W E+ PG TFA+ + N I +S++ A K+KDAI D K RP++D PDI Sbjct: 86 TMKWEEIIKPGQTFAIFANVGNSKINHSKFAAQKMKDAICDRLREKRGERPDIDPKNPDI 145 Query: 138 RVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPM 197 +N++++K A+IALDLSG H RGYR + AP+ E+LAAA + S W TPL DPM Sbjct: 146 WLNLFINKNKATIALDLSGGSHHKRGYRQDSVEAPLMESLAAAFIRASEWDGRTPLYDPM 205 Query: 198 CGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSH 257 CGSGT+L EA M A G R R+GF D IW EVKA+A R + Sbjct: 206 CGSGTILAEALMHAARIPAGYLRKRFGFEHMPDFDADIWSEVKAKADARIKL---PQEGL 262 Query: 258 FYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLD 317 GSD DA ++ + N G+ I L + P T+++NPPYG RL Sbjct: 263 ISGSDMDADAVRASIVNLSYLPGGDKIKIIQSRFQDLDDLEP----CTIITNPPYGMRLM 318 Query: 318 SEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNY 377 + + + +G +K + G N +F L+ + LR +++ NG LD + Sbjct: 319 KDEDVESFTGEIGDFLKKKCAGSNAWVFFGERKLILKIGLRPSRKFPLSNGGLDGRLCKF 378 Query: 378 HVAESTP 384 + Sbjct: 379 EMYRGNK 385 >UniRef50_D2BKU1 RNA methyltransferase n=24 Tax=Lactobacillales RepID=D2BKU1_LACLK Length = 384 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 117/382 (30%), Positives = 187/382 (48%), Gaps = 16/382 (4%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQG-GVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 L A+++ GLE L+ EL NL + V F+G+ + ++ +W R A R+ + +G Sbjct: 7 LLATSSSGLESLVARELRNLEIENVSIDDRSRVFFEGNLATIAKANLWLRTADRVKIVVG 66 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAV-HFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 E K + +L+ V A+ W E+ G+ F V + T+ N K AIV Sbjct: 67 EFKARTFDELFENVYALPWAELIPFGSQFPVSKAKAVKSTLHNEPSIQSITKKAIVKKLQ 126 Query: 122 RKNLPRPN---VDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLA 178 RP + + + + LHK+ A++ +D +GD L RGYR G AP+KE +A Sbjct: 127 -TTYHRPEGVPIPENGAKFSIEIALHKDMATVLIDTTGDSLFKRGYRSEKGEAPLKENMA 185 Query: 179 AAIVMRSGW--QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 A+I++ + W P +DP CGSGT IEAAMLA + APG++R + F+ W DE I Sbjct: 186 ASIILLTNWLANPRRAFVDPTCGSGTFTIEAAMLALNMAPGMNRP-FAFTAWPWFDEEIL 244 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 ++ KA A+ + R + G D D ++I A+ NA AG+ ++I ++ + Sbjct: 245 KQEKALAKKQIR---TDLELDIQGFDIDGKMIDIAKHNALAAGLSDVIKYKQMRLQDFRT 301 Query: 297 PLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQ 356 G ++SNPPYG RL+ E A+ AL+ +G+ W+ + ++ Sbjct: 302 DKFD---GVLVSNPPYGVRLEDEEAVAALYGEMGKTF-APLETWSKYILTSDVAFEKHYG 357 Query: 357 LRADKQYKAKNGPLDCVQKNYH 378 +A K+ K NG L Y Sbjct: 358 AKATKKRKLYNGTLRTDLYMYF 379 >UniRef50_A8G252 Putative RNA methylase family UPF0020 n=7 Tax=Prochlorococcus marinus RepID=A8G252_PROM2 Length = 374 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 112/379 (29%), Positives = 182/379 (48%), Gaps = 7/379 (1%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 ++ AS GLE+ L E+ NLG + ++F+ D Y+ +SRLA R + Sbjct: 2 NVVASAPEGLEKSLAEEISNLGGFNINTYKRFINFECDIETFYRVHFYSRLAFRFYREIA 61 Query: 63 ECKVYSDLDLYLGVQ-AINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 Y LY GV+ + +W + TF V +G ++ ++ + A++VK++I D Sbjct: 62 TFSCYDKQSLYEGVRDSFDWLNWLHFEKTFNVKVTGRTSSLSHTHFTALEVKNSITDLQQ 121 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 R N+ D PD +++ L+ A I+L S + LH RGYR G AP+KE LA+ + Sbjct: 122 AVWNKRSNISLDNPDFIIHLHLNNNKAIISLQSSLESLHKRGYRPAVGNAPLKENLASGL 181 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + + W PL+D MCGSGT LIEA + + + + F W + I+ K Sbjct: 182 INMTKWNGKVPLIDFMCGSGTFLIEAVNQILEVPINIDQ-VYLFENWLDFRKDIYLSEKN 240 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 +A+ + E G + + +V ++A N LAG+ I D +L Sbjct: 241 KAKYKIIN--YEKLPTIIGCEINKKVFEQANINISLAGLESYIEIINNDFLELQL---SC 295 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 G ++ NPPYG++L + LI L+ +G +KN F GW L S +P L L++++ Sbjct: 296 KPGIIICNPPYGKKLGDQNELICLYEQMGIFLKNNFSGWEFWLLSGNPKLTKYLKMKSSV 355 Query: 362 QYKAKNGPLDCVQKNYHVA 380 + NG +DC Y + Sbjct: 356 KIPVSNGGIDCRWIQYLIR 374 >UniRef50_C2KWZ1 Site-specific DNA-methyltransferase (Adenine-specific) n=6 Tax=Firmicutes RepID=C2KWZ1_9FIRM Length = 387 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 123/390 (31%), Positives = 186/390 (47%), Gaps = 16/390 (4%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 L GLE + K E+++LG V G VHF GD + ++ ++ R R++L LG Sbjct: 5 ELVVPCHFGLEAVCKKEIQDLGYDVHTVSDGKVHFIGDAEAIVRANIFLRTGERVLLKLG 64 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAV-HFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 S DL+ G +A+ E A+F V S + + + + +K A+VD Sbjct: 65 SFHAESYEDLFQGTKALPLEEYLPKDASFWVTKASSVKSKLFSPRDIQSVMKKAMVDRM- 123 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 + + V L+K+ + LD SGD LH RGYR + G APIKETLAA++ Sbjct: 124 ASYYHQSFFEEHGAKYPFRVSLYKDEVLLCLDTSGDSLHKRGYRLKMGKAPIKETLAASL 183 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQ-HDEAIWQEVK 240 ++ S W+ P +DPMCG+GT IEAAM+A APG+HR + W + W Sbjct: 184 ILLSKWREDAPFVDPMCGAGTFPIEAAMIAAKIAPGMHR-HFTAEAWENLIPKKEWDYAL 242 Query: 241 AEAQTRARKGLAEYSSH-------FYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQ 293 EA + L E + G D D +I R NA AG+G+LI F+ ++V + Sbjct: 243 EEAGDEIDRSLLETKKNSYGKMVDIQGYDIDPAMIPVCRENAERAGVGKLIHFQEREVGK 302 Query: 294 LTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLS 353 +++ G +L+NPPYGER++ + L L++ L ++ W L L +A Sbjct: 303 MSH---SKRGGLILTNPPYGERIEDKRNLPLLYTELREAYED-LDDWRLCLITAYEQAEK 358 Query: 354 CLQLRADKQYKAKNGPLDCVQKNYHVAEST 383 L +ADK K NG + Y+ Sbjct: 359 YLG-KADKNRKLYNGMMKTYFYQYNGKGRK 387 >UniRef50_Q6MD72 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MD72_PARUW Length = 380 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 112/357 (31%), Positives = 177/357 (49%), Gaps = 8/357 (2%) Query: 26 VECQVVQGGVHF-KGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEM 84 + Q GV + + +Y+ SRLA+R++LPL + + LY + I+W+ Sbjct: 30 TDLQTGYRGVFINQWNWADIYKINYASRLATRVLLPLSRFRCFDRKSLYRHIYDIDWSLY 89 Query: 85 FNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLH 144 G TFA+ + + +RNS + A VKDAI D K RP+VD P +++N+++ Sbjct: 90 LKEGNTFAIDANVHHRELRNSLFAAQVVKDAICDQLRHKVGRRPSVDVQQPHVQLNLYIQ 149 Query: 145 KETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLL 204 A I+ D SG LH RGYR AP++ETLAAAI+ + + LDP CGSGTLL Sbjct: 150 HSLAIISFDTSGTPLHKRGYRQETVEAPLQETLAAAILRLAKYSADKVFLDPCCGSGTLL 209 Query: 205 IEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSD 264 IEAA++A+ PG R +WGF + W +V+ + H +G D + Sbjct: 210 IEAALMASQTPPGYLRQKWGFMNHPDYQANEWLKVRNRLDEHRKTI---QPGHLFGIDIN 266 Query: 265 ARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIA 324 + +TN + AG G+ + D + + P P +++NPP+G+RL+ E L Sbjct: 267 KSAVWATKTNLKAAGFGQAVEVLQADFREFS---PTVPPDLIVTNPPHGKRLEEEDQLRP 323 Query: 325 LHSLLGRIMKNQFGG-WNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVA 380 + LG MK + +F+ + +L + L A K++ NG +D Y + Sbjct: 324 FYRSLGDFMKKKTARPAQGFVFTGNLELAKEVGLAASKRHVLNNGGIDSRLLAYELY 380 >UniRef50_A8ZTQ6 Putative RNA methylase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZTQ6_DESOH Length = 395 Score = 384 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 120/364 (32%), Positives = 179/364 (49%), Gaps = 8/364 (2%) Query: 18 TELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQ 77 EL +L A + + G+ F D +Y+ SRL SR + PL DLY + Sbjct: 39 QELADLSAADIEPTPRGIRFSADRATLYKINYTSRLLSRCLAPLAVFPCRHTDDLYSAGK 98 Query: 78 AINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLP-RPNVDRDAPD 136 A+ W + F G TFA+ +N I +++Y +++KDAI D FT RP+VD PD Sbjct: 99 ALPWKDFFIKGRTFAITADVVNSDITDARYTTLRLKDAIADYFTENTGRQRPDVDTRNPD 158 Query: 137 IRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDP 196 +RV+V + A I+LD SG+ LH RGYR+ + AP++ET+AAAI+ S W TPL DP Sbjct: 159 VRVDVTILDNRAIISLDTSGEALHKRGYRELSVSAPMQETVAAAILHFSRWDKKTPLYDP 218 Query: 197 MCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSS 256 MCGSGTLL EA M A + G+ RG +GF D +WQ+V+ EA Sbjct: 219 MCGSGTLLCEALMAACNIPAGILRGAFGFQILPDFDPVLWQQVRKEADAEI---TEIPEG 275 Query: 257 HFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERL 316 GSD + + A+TN G ++ + + P+ +++NPPYG R+ Sbjct: 276 LIAGSDVNPAAVTAAKTNLMGLHYGGRVSITQQAFLDI----PELENRLIITNPPYGIRM 331 Query: 317 DSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKN 376 + L + LG +K + G ++ D + L L+ + + G LD Sbjct: 332 GRDRDLRFFYKCLGDFLKQKCRGSTAWIYFGDRDYIKNLGLKTAWKLPLRAGGLDGRLVR 391 Query: 377 YHVA 380 Y + Sbjct: 392 YELY 395 >UniRef50_A6GTU6 Probable oxidoreductase n=1 Tax=Limnobacter sp. MED105 RepID=A6GTU6_9BURK Length = 441 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 130/411 (31%), Positives = 199/411 (48%), Gaps = 24/411 (5%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 + FAS RGLEE+L ELE++GA + + V GG F+ R + W+R A RI L L Sbjct: 31 NCFASCPRGLEEILVAELESMGAQKTRAVTGGCTFEASWRQATRMTYWTRFAGRIGLELA 90 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + S+ + Y ++++W F TF V + L I++ ++ +++KDA+ DAF Sbjct: 91 RGECTSEDEFYHIAKSVDWHNWFKLSNTFRVDLNNLGADIQSVRFTQLRLKDAVCDAFLE 150 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + RPN+ +APD+R+ ++ A + +DL+G+ L RG+R+ AG+AP+KE LAA + Sbjct: 151 RFDERPNISVEAPDVRIFAAINPTEAMVYIDLAGENLFKRGWREEAGVAPLKENLAAGLW 210 Query: 183 MRSG----WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 + + LDP CGSGTL+IE+ DRAPGL R + F +E Sbjct: 211 HIARQSEAGKNADVFLDPFCGSGTLVIESLSQLCDRAPGLERA-FAFENLKPFTPEWGKE 269 Query: 239 VKAEAQTRARKGLAE--YSSHF--YGSDSDARVIQRARTNARLAGIGEL-----ITFEVK 289 ++ +A R GL + + +F Y SD +I A+ N AG EL + F + Sbjct: 270 LQEDANRRFNAGLDKALTTPYFQWYASDITELLIDIAQENLARAGFEELLDAGIVQFAQR 329 Query: 290 DVAQLTNPLPKGPYGTVLSNPPYGER-------LDSEPALIALHSLLGRIMKNQFGGWNL 342 D + P P G V SNPPYGER + + A L G +K F GW Sbjct: 330 DALTVEPP---SPSGIVFSNPPYGERVRAKGADVPEDEAYERLFKAYGDHLKMNFSGWTA 386 Query: 343 SLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAE 393 LFS ++ L L ++ NGP++C + + Sbjct: 387 FLFSGDLEIKKTLGLSPKRKRPLFNGPIECRLFEIPLTRGVYRPRATSEQP 437 >UniRef50_A4XLV3 Putative RNA methylase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XLV3_CALS8 Length = 370 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 105/376 (27%), Positives = 174/376 (46%), Gaps = 11/376 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 LF +TA G+E + K EL LG + +V G + +GD + + + R A+R+ L Sbjct: 2 ELFIATAFGVESVTKEELVRLGYKDLKVENGRIFVQGDIEDIPRLNINLRTANRVFAILK 61 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + K + +L+ G+ W E+ A + + + K AI++ + Sbjct: 62 KFKAETFDELFSGIYDFEWQEILPKDANILITGRSEKSKLFSISSCQSITKKAIIEKLKK 121 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 K + ++ + L +TA + D +G+ LH RGYR +AP+KE +AA +V Sbjct: 122 KY-SVSWFEETGNLYKIEIALLNDTAYVLFDTTGESLHKRGYRKLQSLAPLKENIAATLV 180 Query: 183 MRSGWQP-GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + S W+P L DP CGSGT+ IEAAM+A + APGL+R + +W + + Sbjct: 181 ILSRWRPQQEVLWDPFCGSGTIPIEAAMIAKNIAPGLNRTFLAEQN-GFVSQDLWNKARL 239 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 E + + SD D ++I A+TNA+ AG+ + I F D ++ Sbjct: 240 EVIGKIDYN---SKFNILASDIDEKMIYIAKTNAKAAGVEKDIRFFKADGRKIKK---SS 293 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 G +++NPPYGER+ + L+ G+ +++ F GW + S +ADK Sbjct: 294 DKGIIITNPPYGERI-DNSDIFNLYRDFGKCLRD-FSGWRFFILSGYDKFEKAFGKKADK 351 Query: 362 QYKAKNGPLDCVQKNY 377 K NG + Y Sbjct: 352 NRKLYNGKIKTYLYFY 367 >UniRef50_B8JAH2 Putative RNA methylase n=5 Tax=Myxococcales RepID=B8JAH2_ANAD2 Length = 387 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 124/394 (31%), Positives = 187/394 (47%), Gaps = 26/394 (6%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 FA+ A+G E L+ EL L + +GGV F+G ++ + +R A R++L L Sbjct: 2 RFFATCAKGTEGALRRELSGLRLPAVRGDRGGVSFEGALEAGMRACLHARTAMRVLLELA 61 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 LY G +A+ W + + T AV + + TI +S + A+KVKDA VD Sbjct: 62 RFPAPDAAALYEGARAVAWQDWLDVRTTLAVEATVSSTTITHSGFAALKVKDAAVDVLRE 121 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + RP+VD PD+R+ + L ++ A+++LDL+G LH RGYR AP+KETLAAA++ Sbjct: 122 RLGARPDVDPKDPDVRIVLHLARDEATLSLDLAGAPLHRRGYRAVTTEAPLKETLAAAVL 181 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQH---DEAIWQEV 239 + G P P DPM GSGTL IE A+ A APGL R +GF W + ++ W + Sbjct: 182 LLGGVDPALPFADPMAGSGTLAIEHALRARRIAPGLDRA-FGFQRWPSYRGGPQSAWDRM 240 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 KA A+ L + D + IQ R NA AG+ + D L P Sbjct: 241 KAAARAEI---LPRAPAPIVARDGHPKAIQALRLNAAAAGVEADLEISQADARDLQ---P 294 Query: 300 KGPYGTVLSNPPY--------------GERLDSEPALIALHSLLGRIMKNQFGGWNLSLF 345 G +++NPPY R+ + L + L ++ GW + Sbjct: 295 SADAGAIVTNPPYGERLGGGGEGASAAEARVAGK-KLQGFYRGLAEMLVRH-HGWTAVVL 352 Query: 346 SASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHV 379 S +P L + +R ++ NGPL+ Y + Sbjct: 353 SGNPLLERAIPIRPAVDHRLWNGPLEAHLLKYEL 386 >UniRef50_B0PDR5 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=B0PDR5_9FIRM Length = 406 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 115/376 (30%), Positives = 176/376 (46%), Gaps = 6/376 (1%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +L GLE +L E++ LG V G V F GD +V ++ +W R A R+ + +G Sbjct: 27 TLMCPCLFGLESVLSFEVKKLGGENIVVTDGRVTFDGDLSMVAKANIWLRTAERVGIVIG 86 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + + +L+ + W + F V +N + + +K A+V F Sbjct: 87 SFRAETFTELFDQTAELPWEQFIGEDDCFPVKGWSVNSKLFSMSDCQRIIKRAVVRRF-E 145 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + ++ +HK+ ++ LD SG GLH RGYR A APIKETLAA IV Sbjct: 146 NVYHKTLFAETGALYQIQYSIHKDQVTLVLDTSGPGLHKRGYRANANDAPIKETLAAGIV 205 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 + + + + DPMCGSGTL+IE+A+ A + APG+ R R+ GW ++ E + + Sbjct: 206 DLARVRGDSLVFDPMCGSGTLVIESALRALNIAPGIRR-RFAAQGWRCFQNGLFDEARRD 264 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 A ++ R+ + + SD D ++ R NA AG+ I DVA LP+G Sbjct: 265 AASQVRR---DAPFEAFASDIDPEAVRLTRENAAKAGVAGRIHVVQADVADFAPQLPEGR 321 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 G VL+NPPYGER+ E AL LG + G++ + S A ++ Sbjct: 322 SGIVLANPPYGERMLGEQEAQALSRTLGASFPKR-DGFSYYIISPDDGFEDLFGRPAARR 380 Query: 363 YKAKNGPLDCVQKNYH 378 K NG + C Y Sbjct: 381 RKLYNGMIKCQVYMYF 396 >UniRef50_C4FAV8 Putative uncharacterized protein (Fragment) n=2 Tax=Collinsella RepID=C4FAV8_9ACTN Length = 606 Score = 379 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 176/572 (30%), Positives = 264/572 (46%), Gaps = 111/572 (19%) Query: 231 HDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKD 290 HD A W+E+ EA RA + +D + AR + AG+ + + F D Sbjct: 1 HDAATWRELLNEADRRAELAKGRV-ARIVATDPSGDAVACARRILKAAGLADRVIFAQPD 59 Query: 291 VAQLTNPLPK------GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNL-- 342 + +++ L P G V + +E A+ + +L G Sbjct: 60 LDKISRKLMMSACCGGEPRGFVFLD-------TTETAISKMSRVLDLATSLHAGACGADP 112 Query: 343 --SLFSASP---------------DLLSCLQLRADKQ------YKAKNGPLDCVQKNYHV 379 ++ S P + L++ + + + A NG + + N Sbjct: 113 VRAMLSTMPTVALTRDDLLIRALGEPARSLRVMPNNEEAELAVFSAANGAISAGEGNVAA 172 Query: 380 AESTPDSKPAM-------------------------VAEDYTNRLRKNLKKFEKWARQEG 414 +S P +E + RLRK K KWA++EG Sbjct: 173 EDSMPAEDAIESSVAPSPATTLIDLGDGKPCAVLIPESEQFARRLRKVAKLRRKWAQREG 232 Query: 415 IECYRLYDADLPEYNVAVDRY-------ADWVVVQEYAPPKTIDAHKARQRLFDIIAATI 467 + CYR+YDADLP+Y+ A+D Y W+V+ EYA P+ +D A RL DI+ Sbjct: 233 VTCYRVYDADLPDYSAAIDLYEGSATTPGRWLVIAEYAAPREVDPALAEARLLDILTLAP 292 Query: 468 SVLGIAPNKLVLKTRERQKGKNQYQKLGEKG----------------------------- 498 +L + P+ + K R R +G +QY K Sbjct: 293 RILQVDPDNVFAKARIRSRGGSQYGKQAGGPNPGKGGKPRGTRGGSASNRPSQGASSGTP 352 Query: 499 ------EFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDF-LNLFSYTGS 551 + E VN DYLDTG+FLDHRI R ++ + ++GK F LNLF+YTG+ Sbjct: 353 SDIRTRRLPLIEEGGLTFAVNFNDYLDTGIFLDHRITRGLVREHARGKRFFLNLFAYTGT 412 Query: 552 ATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW---LREANEQ 608 AT +A G T TVD+S TYL+WAERN+ NG G H ++AD ++W +R+ + Sbjct: 413 ATCYAADAGVEETVTVDLSNTYLDWAERNMEQNGFVGPDHHYVRADVMSWIRDMRQTRNR 472 Query: 609 FDLIFIDPPTFSNSKRM-EDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDG 667 +DLIF DPPTFSNS +M +DVQRDH+ L+ L RLL G +FS N R FR D++ Sbjct: 473 WDLIFCDPPTFSNSSKMGRRTWDVQRDHVELLVGLSRLLSREGEAIFSCNLRTFRPDIEE 532 Query: 668 LAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 LA+ G+ +IT +T+ +DFARN++IH+C+L+ Sbjct: 533 LARAGVVLTDITDETIPEDFARNKKIHHCYLV 564 >UniRef50_C7PKB2 Putative RNA methylase n=2 Tax=Sphingobacteriales RepID=C7PKB2_CHIPD Length = 398 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 111/382 (29%), Positives = 183/382 (47%), Gaps = 5/382 (1%) Query: 16 LKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLG 75 L+ E++ LG + + GV K + + R AS+++ L + + D+Y Sbjct: 22 LEQEIKELGFEQTETFVTGVRLKATVNECIRLNLNLRCASQVLYSLQSFEAGNADDVYNN 81 Query: 76 VQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAP 135 + W ++ G F++ + N++I NS Y ++VKDAI+D K RP+ Sbjct: 82 IHQYPWEDILPDGGYFSITSNVSNESINNSMYANLRVKDAIIDRIREKTGKRPSTGAALT 141 Query: 136 DIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLD 195 ++++ E A I +D SGD L GYR +G A + E+LAAA + S W +P ++ Sbjct: 142 GAVIHLFWKDEHAEIFVDTSGDSLARHGYRAISGPAQMLESLAAATIYASRWDRVSPFVN 201 Query: 196 PMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYS 255 MCGSGT+ IEAAM+AT+R PGL + F +D ++Q+ A + + ++ Sbjct: 202 VMCGSGTVAIEAAMIATNRRPGLFITNYAFMHLKGYDIQVYQQEDARLEEQIKEI---PG 258 Query: 256 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGER 315 +D A+ I+ AR NA AG+G+LI F V D +P G G NP Y ER Sbjct: 259 LRIIATDHSAKAIESARKNAIAAGVGKLIEFAVCDFTA--TKVPPGVPGVFYVNPEYDER 316 Query: 316 LDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQK 375 + L +S +G MK + GG+ +F+ + +L + L+A ++ + + +DC Sbjct: 317 ANEIMVLEETYSRIGDFMKQKCGGYFGYVFTGNLELAKKIGLKAKRRIEFYSSTIDCRLL 376 Query: 376 NYHVAESTPDSKPAMVAEDYTN 397 Y + T T Sbjct: 377 EYELYSGTRTEPKVTETPPTTA 398 >UniRef50_C7I387 Putative RNA methylase n=1 Tax=Thiomonas intermedia K12 RepID=C7I387_THIIN Length = 416 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 120/395 (30%), Positives = 185/395 (46%), Gaps = 15/395 (3%) Query: 3 SLFASTARGLEELLKTELENLGAVECQ-----VVQGGVHFKGDTRLVYQSLMWSRLASRI 57 F RG+E L E++ L GG+ +G + + RL SR+ Sbjct: 26 DFFLPCPRGVEAALADEVKALAEHSPTLRAGTPTPGGLPVQGSLTDAMRLNLHCRLPSRV 85 Query: 58 MLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIV 117 +L G C D+Y + + W + F+ V + + + ++ A++VKD I Sbjct: 86 LLLGGSCSYADAEDIYHLARDLAWEKWFDVTQALRVDVTAERSPLASIKFAALRVKDGIC 145 Query: 118 DAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETL 177 D F RP+VD PD+R+++ L + A + LD SG+ L RG+R G AP+KE L Sbjct: 146 DRFRALTGERPDVDTAHPDVRIHLHLREADALLYLDTSGEPLFKRGWRSEHGAAPLKEHL 205 Query: 178 AAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 AA ++ SGW PG L DP+CGSGTL+IEAA +A +RA GL R +GF D W Sbjct: 206 AAGLLKLSGWTPGDVLFDPLCGSGTLVIEAAQMAANRAAGLARS-FGFEALQGFDMDAWN 264 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDV-----A 292 ++ +A+ R F+ +D D ++ NAR AG+ I + DV Sbjct: 265 AMREQARQAVRPL---TPGQFFAADIDPANVRMTLDNARRAGVDGAIAAQAGDVIAAVPP 321 Query: 293 QLTNPLPKGPYGTVLSNPPYGERLDSE-PALIALHSLLGRIMKNQFGGWNLSLFSASPDL 351 LP G ++SNPPY ER+ E A L R +K +F GW+++L +A Sbjct: 322 VDAAALPAGQAAWLISNPPYNERIAPEGQAADDFAPQLARTLKQRFAGWHVALLAADLHW 381 Query: 352 LSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDS 386 L+L+ ++ NG ++C + + Sbjct: 382 DKALRLKPRRRIVLFNGTIECRLMLIDMVAGSARG 416 >UniRef50_B1XYJ5 Putative RNA methylase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XYJ5_LEPCP Length = 440 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 122/439 (27%), Positives = 195/439 (44%), Gaps = 51/439 (11%) Query: 3 SLFASTARGLEELLKTELENL--------GAVECQVVQGGVHFKGDTRLVYQSLMWSRLA 54 L+ A G+E LL E+ + A Q + GV G + + RLA Sbjct: 10 PLYLPCAAGVEPLLADEVRAILRAAGAEKAAESVQPGRAGVSLIGSPASAMRLHLECRLA 69 Query: 55 SRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKD 114 R++ + E + + DLY +++ W + P + V + + + + + ++++KD Sbjct: 70 QRVLWQVAEGPYHDEHDLYDLARSVAWGDWITPRQSLRVDTTAVRSPLHSLHFASLRIKD 129 Query: 115 AIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIK 174 A+ DA + RP+VD PD+ + + L A++++DLSG+ L RG+R+ G AP+K Sbjct: 130 AVCDAMRDSHGERPDVDPRHPDLPLVLHLSDTHATLSIDLSGEALFKRGWREVQGEAPLK 189 Query: 175 ETLAAAIVMRSGWQP---GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQH 231 ETLAAA++ +GWQ PLLDP CG+GT+ IEAA +A APGL R + F A Sbjct: 190 ETLAAAMLAAAGWQGREADGPLLDPCCGAGTIAIEAAQIACGIAPGLQRT-FAFERLAPF 248 Query: 232 DEA--IWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVK 289 WQ++KAEA+ R + + Y D R+ A NA AG+ I F Sbjct: 249 RAEAQAWQQMKAEARAR----VHAPAVRIYAGDVSFRMTDFATRNAERAGVLHAIDFRTG 304 Query: 290 DVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALI-------------------------- 323 D Q P G ++ NPPYGER+D++ + Sbjct: 305 DALQRPAPTES---GVLMLNPPYGERIDAKGSGAARARDEAGDRLGPRADAGAREGFEGG 361 Query: 324 ----ALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHV 379 A S L K + GW + S L ++L+ ++ NGP++C + + Sbjct: 362 GTSGAFFSALAAHWKRNYSGWTAWVLSPDAKLPQAMRLKESRRVPMWNGPIECRLFRFDL 421 Query: 380 AESTPDSKPAMVAEDYTNR 398 + A +R Sbjct: 422 VAGSMRGPRNDAAGADLSR 440 >UniRef50_C8QZA7 Putative RNA methylase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZA7_9DELT Length = 383 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 117/355 (32%), Positives = 181/355 (50%), Gaps = 7/355 (1%) Query: 26 VECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMF 85 + GV+F + ++Y+ + +RL SR++ PL +S LY A+ W ++ Sbjct: 36 TRLNPIPRGVYFTAEPPVLYRIVYQTRLCSRVLAPLLHFNCHSTKYLYKTALALPWEKLL 95 Query: 86 NPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHK 145 +F ++ + + +S+Y A+ +KDAIVD F ++ RP+VDR PD+ ++ + + Sbjct: 96 GVAQSFMINARVSDSRVGHSRYAALCLKDAIVDRFQQQFGGRPDVDRQQPDLVFDLHIRR 155 Query: 146 ETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLI 205 A I+LDL+G+ LH RGYR +G API+ETLAAA+V SGW PL+DP CGSGT+L Sbjct: 156 NRAVISLDLAGESLHRRGYRRESGEAPIQETLAAALVDFSGWDGTRPLVDPFCGSGTILA 215 Query: 206 EAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDA 265 EA + PG R R+G + A+WQ V+ EA + + + GSD Sbjct: 216 EALLRRAAIPPGRLRRRFGPANLPDFSPALWQRVQKEADGKMQSL---PAGLLAGSDQSK 272 Query: 266 RVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIAL 325 I+ AR N L G+ + V L P +++NPPYG RL + AL Sbjct: 273 SAIRMARRNLALLPQGDRVELRVSPFQAL----PPINNAVIVTNPPYGIRLGDQQEAAAL 328 Query: 326 HSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVA 380 LG +K+ G ++ P LL + L+ ++ K NG L+ V Y + Sbjct: 329 IRELGSFLKHHCTGSTACIYFGDPQLLKAIGLKPSRRKKLNNGGLEGVAACYELY 383 >UniRef50_B9MKJ8 Putative RNA methylase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MKJ8_ANATD Length = 371 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 105/379 (27%), Positives = 169/379 (44%), Gaps = 11/379 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M LF +T G E + K EL LG +V G + + + + + R +RI Sbjct: 1 MIELFVATPLGTESVAKEELVRLGYKNLKVENGRIFVSAELEDIPKLNINLRTPNRIFAI 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L + K + +L+ GV + +W E+ A V + + + K AIV+ Sbjct: 61 LNKFKAKTFDELFDGVYSYSWHEILPKDAKILVTGRTEKSKLVSIRACQSITKKAIVEKL 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 K + ++ + + + A + D +GD LH RGYR AP+KE +AA Sbjct: 121 KSKY-SVNLLGETGQLFKIEIAMINDIAYLLFDTTGDSLHKRGYRKLISKAPLKENIAAT 179 Query: 181 IVMRSGWQPG-TPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 +++ + W+ DP CGSGT+ IEAAM+A + APG++R IW++ Sbjct: 180 LILLAKWKDDEEVFWDPFCGSGTIAIEAAMIARNIAPGINRTFLAEEN-GFISPQIWKKS 238 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 + EA R + SD D +I A+ NA+ G+ + I F D ++ P Sbjct: 239 RLEAIERID---YQKKFEILSSDIDENMIHIAKVNAKEIGVDKDIRFFRADARKIKKPSE 295 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 K G +++NPPYGER+ + + L+ GR +K F W+ + SA + +A Sbjct: 296 K---GIIVTNPPYGERI-DDINIFELYRDFGRCLKT-FDNWHFFVLSAYSKIEKAFGRKA 350 Query: 360 DKQYKAKNGPLDCVQKNYH 378 DK K NG + Y Sbjct: 351 DKNRKLYNGKIKTYLYFYF 369 >UniRef50_Q1NS64 Putative RNA methylase:THUMP n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NS64_9DELT Length = 382 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 117/356 (32%), Positives = 178/356 (50%), Gaps = 8/356 (2%) Query: 26 VECQVVQGGVHFKG-DTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEM 84 GV+F + + +Y+ + +RL SRI+ PL +S LY I W + Sbjct: 34 TRLNQTHRGVYFSAAEHQTLYRIVYQTRLCSRILAPLLHFDCHSSKYLYRTAGTIPWERL 93 Query: 85 FNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLH 144 NP +F ++ I +SQY A+++KDAIVD F +++ RP +D+ PD+ +++ + Sbjct: 94 LNPEQSFMINARVSGSRISHSQYAALRLKDAIVDYFQQRSGRRPGIDKHQPDLVIDLHIR 153 Query: 145 KETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLL 204 + A I+LDL+G LH RGYR + API+ETLAAA++ +GW L+DP CGSGTLL Sbjct: 154 RNRAVISLDLAGGSLHRRGYRQESVEAPIQETLAAAMIDFAGWDGAKKLVDPCCGSGTLL 213 Query: 205 IEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSD 264 EA M + G R +G + WQ+ K EA+ R +A GSD Sbjct: 214 AEALMRQSMIPAGYLRNHFGLQQLPDFEPESWQQSKEEAK---RGIIAPPPGLLAGSDLS 270 Query: 265 ARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIA 324 + I+ AR N L G+ +T +V + +L +++NPPYG RL + A A Sbjct: 271 KKAIRAARRNLALLPHGDRVTLKVCPLQELAPL----NKAVIVANPPYGVRLGDKAAAAA 326 Query: 325 LHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVA 380 L LG +K+ G L+ LL + L+ + NG L+ V Y + Sbjct: 327 LIGELGSFLKHHCTGSTACLYFGDRQLLKAIGLKPSAKKNLNNGGLEGVLARYELY 382 >UniRef50_A5GQS8 Predicted N6-adenine-specific DNA methylase n=21 Tax=cellular organisms RepID=A5GQS8_SYNR3 Length = 398 Score = 366 bits (941), Expect = 1e-99, Method: Composition-based stats. Identities = 119/375 (31%), Positives = 181/375 (48%), Gaps = 20/375 (5%) Query: 23 LGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQ-AINW 81 GA Q ++ V + D Y++ + +RL +++ L S LY GVQ A +W Sbjct: 27 FGAQSLQTLRRAVRCRLDRAGFYRAHLQARLPFQLLRLLASFPCSSRAQLYGGVQQAADW 86 Query: 82 TEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNV 141 P +F V SG + +S + A++VK+A+VD + + R +VD + PD ++ Sbjct: 87 QGWLPPQLSFRVEASGRAGELNHSHFTALEVKNALVDWQRQHSGQRSDVDLEDPDRVFHL 146 Query: 142 WLHKET----ASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPM 197 L + AS+ + S LH RGYR G+AP+KE LAA ++ +GW PL+DP Sbjct: 147 HLGQGRQGPMASLYVAGSSSSLHRRGYRAAMGLAPLKENLAAGLMAITGWDGSVPLVDPF 206 Query: 198 CGSGTLLIEAAMLATDRAPGLH------------RGRWGFSGWAQHDEAIWQEVKAEAQT 245 CGS TLLIEA R PGL R+ W D +W+ + Sbjct: 207 CGSATLLIEAVSRVLQRPPGLLPGAALEPAHHAQARRFSCLQWPDADLGLWRSEVVASAE 266 Query: 246 RARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGT 305 +A G + + G + D V+++AR+N AG+ I D +L P G Sbjct: 267 QALAGSQQPLAPVIGLEKDPEVLEQARSNVAAAGLEAWIDLRPGDGCELMPPP---GPGV 323 Query: 306 VLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKA 365 ++ NPPYGERL E AL AL+ GR +K+ GW+L L S + L L ++A ++ Sbjct: 324 LVCNPPYGERLGDEQALDALYHRFGRQLKDHCSGWSLWLLSGNAKLTRALGMKASRRVPV 383 Query: 366 KNGPLDCVQKNYHVA 380 NG +DC +Y + Sbjct: 384 SNGGIDCRWLHYEIR 398 >UniRef50_A4SVE4 Putative RNA methylase n=2 Tax=Polynucleobacter necessarius RepID=A4SVE4_POLSQ Length = 485 Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats. Identities = 122/485 (25%), Positives = 182/485 (37%), Gaps = 96/485 (19%) Query: 3 SLFASTARGLEELLKTEL---------ENLGAVECQVVQ----GGVHFKGDTRLVYQSLM 49 F GLE L EL + LGA GGV G + Sbjct: 2 RFFVVCPGGLEVPLAQELAEIAQRPDSKALGAWVIDPTPTSPTGGVGLAGPLSAAMALNL 61 Query: 50 WSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGA 109 SR+ASR++L + + + DLY + W + F T V + +++ + Sbjct: 62 HSRIASRVLLQMAQAPYRQEEDLYKLASGLAWEDWFTSKQTLRVDVTAHRSPLKSLNFAT 121 Query: 110 MKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAG 169 +K+KDAIVD RP++D PD+RV L +I LD SG+ L RG+RD G Sbjct: 122 LKIKDAIVDRLRDVTGDRPSIDTAFPDVRVQAHLTATQVTIYLDTSGEALFKRGWRDEKG 181 Query: 170 IAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHR--------- 220 AP+KE LAA I+ +GW+ G L DPMCGSGT LIEAA PG R Sbjct: 182 DAPLKENLAAGILSITGWKSGEILFDPMCGSGTFLIEAAQKTLAIPPGAIRAGMYGDDAK 241 Query: 221 -------------GRWGFSGWAQHDE----AIWQEVKA----EAQTRARKGLAEYSSHFY 259 +GF +E W +K E + ++ + S Sbjct: 242 PSRLAYRPLVTSVHGFGFQRLKPFNEVAEQKRWAALKEGSLNEILAQRKQYPSAESLRIS 301 Query: 260 GSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERL--- 316 G D + +++ + N + A + E D P+ G +L NPPYGERL Sbjct: 302 GGDINEKLVAMFKGNWQRAQLPEQPVVRQIDALASRPPV-NSDSGVMLLNPPYGERLVIK 360 Query: 317 -------------------------------------------------DSEPALIALHS 327 + +P + Sbjct: 361 GGRGQDRNAQESYDESEEPENRFELNLETGRQSAKRSSRESLKKLQAQEEQDPKFVEFLR 420 Query: 328 LLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSK 387 G+ +K FGGWN+ + +A L L+++ K+ NGPL+C + + + Sbjct: 421 QFGQHLKEAFGGWNIFVLTADMALPGQLRIKESKRTPLFNGPLECRLFKFEMHAKRSVAN 480 Query: 388 PAMVA 392 + Sbjct: 481 DSEKE 485 >UniRef50_B8LLK7 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LLK7_PICSI Length = 532 Score = 364 bits (935), Expect = 6e-99, Method: Composition-based stats. Identities = 121/425 (28%), Positives = 189/425 (44%), Gaps = 50/425 (11%) Query: 4 LFASTARGLEELLKTELEN--LGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 FA+ A GLE+++ EL + +GA + GGV+F+G Y + +W R R++L L Sbjct: 95 FFATCAPGLEQVVAAELGSPLIGATGIKEGSGGVYFQGTLSTGYSANLWLRCGIRVLLEL 154 Query: 62 --GECKVYSDLDLYLGVQ-AINWTEMFNPGA------------TFAVHFSGLNDT-IRNS 105 E +Y V+ A++W + TFAV + T + NS Sbjct: 155 SYAEMPKKDRDCVYNFVRNAVDWPQYLASSTLKKSGYKRWKFRTFAVQSRVWDCTQVTNS 214 Query: 106 QYGAMKVKDAIVDAFTRK-NLPRPNVDRDA---PDIRVNVWLHKETASIALDLSGDGLHL 161 +++ KDAI D+ N RP+ + D+ + + L+++ A + D+SG LH Sbjct: 215 MSASIRTKDAICDSIRDACNNKRPDPPEEGGAKADVPLFLSLYRDKAVLYKDMSGVSLHR 274 Query: 162 RGYRDRAGIAPIKETLAAAIVMRSGWQ------------------PGTPLLDPMCGSGTL 203 RGYRD A + E +AA I+ +GW LLDPMCGSGT Sbjct: 275 RGYRDVMHRASLSEAVAAGILTLAGWNTRVQGLGVANKNGGLESLENMVLLDPMCGSGTF 334 Query: 204 LIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDS 263 LIEAA++A +RAPGL R W F W D W+E A + A G+D Sbjct: 335 LIEAALMAANRAPGLTRKTWPFKSWHDFDSVSWKECWQNASSAATP--IPPGLRLLGNDK 392 Query: 264 DARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSE---- 319 + +A AG+ E++ KD + P V+ NPP+G RL +E Sbjct: 393 HEGALSLCARDAEAAGVKEVLELSCKDCRDYS---PSVTPTLVVVNPPWGFRLGNEGEND 449 Query: 320 -PALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYH 378 + + LG+ K ++ + S L+++ADK++ G ++C +Y+ Sbjct: 450 HEGVESTWEALGQFSKQHCNNADMYILSGKSTATRELRMKADKKWPITMGGVECRLLHYY 509 Query: 379 VAEST 383 V S Sbjct: 510 VLPSK 514 >UniRef50_D1VVQ9 Protein YpsC n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVQ9_9FIRM Length = 378 Score = 363 bits (933), Expect = 1e-98, Method: Composition-based stats. Identities = 117/379 (30%), Positives = 183/379 (48%), Gaps = 10/379 (2%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 + A+T GLE L K EL ++G + +V G + G + V + R A RI + + Sbjct: 6 IIATTNFGLEALCKRELLDMGYNDLKVQDGRIELTGTYKDVCALNLNLRTAERIFMVVAS 65 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 + S +L+ V I+WT N + F + + + + AI+ K Sbjct: 66 FEALSFEELFDKVYNIDWTYFLNEDSNFILLAKSHKSKLFSLSDIQRISEKAIIKKLQNK 125 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 + + I++ V L + A+IA+D SGDGLH RGYR API ET+AA++VM Sbjct: 126 Y-KKDWFSKSNERIKIEVSLLDDIATIAIDTSGDGLHKRGYRQINYKAPISETIAASMVM 184 Query: 184 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEA 243 S W P PL DP CGSGT++IEAAM+ + APGL R ++ + + I++E K + Sbjct: 185 LSFWNPERPLADPFCGSGTIVIEAAMIGKNIAPGLMR-KFDLENFIFIPQEIFKEEKRKC 243 Query: 244 QTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPY 303 + + + SD + I+ A+ N+ + G+ E I F KD+ L + Y Sbjct: 244 YEKID---YDKKLNINASDVSYKAIEVAKNNSAILGLDEDINFFQKDIRNLDL---EDNY 297 Query: 304 GTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQY 363 G +++NPPYGERL + A L+ LGR+ K W+L + S +AD++ Sbjct: 298 GVLITNPPYGERLAVKEA-PELNRELGRLYKT-IPTWSLYAITGSETFQKDFGKKADRKR 355 Query: 364 KAKNGPLDCVQKNYHVAES 382 K NG + Y+ Sbjct: 356 KLYNGKIKTYYFQYYGPRP 374 >UniRef50_B0S0R6 Methyltransferase n=2 Tax=Finegoldia magna RepID=B0S0R6_FINM2 Length = 373 Score = 362 bits (929), Expect = 3e-98, Method: Composition-based stats. Identities = 109/380 (28%), Positives = 174/380 (45%), Gaps = 9/380 (2%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 + + A GLE L+K +L ++G V G + +GD + + + + R A R+++ LG Sbjct: 3 IIVTCAFGLESLVKRQLLDMGYENLNVNDGRIILEGDEKDIAKLNINLRCADRVLIELGN 62 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 K S L+ GV+ INW E+ + F V + + + + AI+ + +K Sbjct: 63 FKAVSFEQLFKGVEKINWLEILEADSNFIVEGRSYKSKLFSIKDCQSITEKAIIKSLQKK 122 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 + R+ V L K+ SI LD SGDGLH RGYR+ + +API+E LAA I+ Sbjct: 123 Y-KVDWFSKSKGRFRIEVSLVKDICSITLDTSGDGLHKRGYREESVLAPIRENLAAGIID 181 Query: 184 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEA 243 S PL+D CGSGT IEAA + APG+ R ++ F + +++ + +A Sbjct: 182 LSFANSDRPLVDLFCGSGTFAIEAARKFRNIAPGIDR-KFDFINFNDKFNDAYKQERTKA 240 Query: 244 QTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPY 303 + + SD D I++A NA AG+ E I F +D + + Y Sbjct: 241 LESID---YDKKIDIFASDVDGSAIEKAIANAENAGVREDIRFVTRDFRNV---VLNDNY 294 Query: 304 GTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQY 363 ++SNPPYG+RL ++ LG M +F + + + D ++ K Sbjct: 295 FVLISNPPYGKRLGERQEAEKIYKDLGIKM-AKFKTASQYIITDCEDFEKFYGKKSSKNR 353 Query: 364 KAKNGPLDCVQKNYHVAEST 383 K NG + C Y Sbjct: 354 KMYNGNMKCYLYQYFGPRPK 373 >UniRef50_Q1JY11 Putative RNA methylase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY11_DESAC Length = 369 Score = 361 bits (926), Expect = 7e-98, Method: Composition-based stats. Identities = 120/374 (32%), Positives = 171/374 (45%), Gaps = 19/374 (5%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +A A G E + EL++ V + GGV F G R +Y + +WSR ASRI++ LG Sbjct: 7 QFYAIVAPGFESVCADELKSRLQVPVSIEHGGVTFHGKLRELYLANLWSRCASRIVVRLG 66 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + LY + W PG V + + +S + +AI A Sbjct: 67 DFNCRDFPTLYRKAVRLPWGRFLKPGTAIDVRTTCRQSRLNHSGRIGQTISEAIGKALGT 126 Query: 123 KNLPRPNVDRDAP-DIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 P +D P ++ V L + I++D S + LH RGYR + AP++ETLAA Sbjct: 127 -----PVSQQDTPFRQQILVRLDNDHCQISIDSSAERLHRRGYRQQMTPAPLRETLAAGC 181 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 +++ W + LD +CGSGTL IEAAM+A + APG R + F W + +WQ + Sbjct: 182 LLQCHWNGDSDFLDALCGSGTLAIEAAMIAGELAPGRQR-VFAFQHWPGYRGNLWQSLLH 240 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 EA+ + R S SD D + I ARTNA+ AG+ + I FE Q + G Sbjct: 241 EAKHQQRTP----SITITASDQDEQAIHAARTNAKAAGVDQWIHFEQCPYQQQHS---SG 293 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 P G LSNPPYGERL L L F GW+ ++ P L+ Sbjct: 294 PQGLWLSNPPYGERLQQSQTTPQLLQALHAHFDANFSGWHGAMILPHP-----LRGVPAP 348 Query: 362 QYKAKNGPLDCVQK 375 Q + +NG L Sbjct: 349 QLQFRNGGLPVALY 362 >UniRef50_C7N3A2 Predicted SAM-dependent methyltransferase n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N3A2_SLAHD Length = 657 Score = 359 bits (921), Expect = 3e-97, Method: Composition-based stats. Identities = 143/324 (44%), Positives = 202/324 (62%), Gaps = 13/324 (4%) Query: 391 VAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD--------WVVVQ 442 A+ + RL+K K+ KWA I CYR+YDADLP+++VA+DRY ++V+ Sbjct: 312 GADQFAARLKKVAKERRKWAEDNQICCYRVYDADLPDFSVAIDRYDGVWKNEGESYLVIA 371 Query: 443 EYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLE 502 EY PK + KA R D++ V+G+ + + KTR +KG QY + + Sbjct: 372 EYQAPKEVSEEKAAARFADVMTLAPVVMGVPADHVFAKTRRHEKGGGQYTDQQKDSCVVY 431 Query: 503 VTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGAR 562 E V+L YLDTG+FLDHRI R ++G++++G +FLNLF+YTG+ATVHA LGGA Sbjct: 432 TDESGCIFEVDLGGYLDTGIFLDHRITRELVGRLAQGTNFLNLFAYTGTATVHAALGGAL 491 Query: 563 STTTVDMSRTYLEWAERNLRLNGL-TGRAHRLIQADCLAWLREA---NEQFDLIFIDPPT 618 +TTTVDMSRTYL WAERN+ LN + HR ++ D L W+ ++DLIF+DPPT Sbjct: 492 TTTTVDMSRTYLGWAERNMELNNISDPTRHRFVRYDALRWIEREIGTGNRYDLIFVDPPT 551 Query: 619 FSNSKRMED-AFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQE 677 FSNSK M D + VQRDH+ L+ + LL GG +FS N R F D++ LAK G+ ++ Sbjct: 552 FSNSKSMGDTTWSVQRDHVNLLIGVAALLTPGGKAIFSCNLRNFTPDVEALAKEGIVLKD 611 Query: 678 ITQKTLSQDFARNRQIHNCWLITA 701 IT +T+ DF RN +IH C++++ Sbjct: 612 ITAQTIPHDFERNPRIHKCYVVSK 635 >UniRef50_Q3A2B2 Predicted N6-adenine-specific DNA methylase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2B2_PELCD Length = 369 Score = 359 bits (921), Expect = 3e-97, Method: Composition-based stats. Identities = 115/376 (30%), Positives = 166/376 (44%), Gaps = 14/376 (3%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + LFA TA GLE + EL++LG QV +GGV F G +Y++ +W R ASR+++ Sbjct: 5 IFELFAVTALGLESVCARELKDLGIKS-QVCKGGVAFYGGLEQLYKANLWLRTASRVLVR 63 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 LG DLY + W P + S ++++ V+ A A Sbjct: 64 LGSFGCKDFPDLYQKALRLPWGRFVKPDTDLQIKASSSRSRLQHTGRIVETVESAAHRAL 123 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 R + V +++D SG LH RGYR G AP++ETLAA Sbjct: 124 GRATD-----SGAGLRQLILVRFEDNRCVVSVDSSGPLLHRRGYRHMVGAAPLRETLAAG 178 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 I+M W TPL+DPMCGSGT ++E A++ RAPG R + F W ++ +W + Sbjct: 179 ILMLLDWDARTPLVDPMCGSGTFVVEGALMGMRRAPGTARE-FAFMQWPRYRPGLWHVL- 236 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 QT+AR G D D VI A NA AG+ + F ++ + P Sbjct: 237 ---QTQARSAEQSCLPPLLGYDRDPDVIDAAAGNASRAGVAAVTQFGKAELGEGRFP--- 290 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G ++ NPPYG RL + L L+ LG ++ G W ++ L L D Sbjct: 291 ERPGFIMCNPPYGGRLGRDVRLTGLYRRLGEFYRSSGGVWQGAVLCPVGPLAKSLGEGFD 350 Query: 361 KQYKAKNGPLDCVQKN 376 NG +D Sbjct: 351 CIGLLNNGGIDVGLYK 366 >UniRef50_A4EBB5 Putative uncharacterized protein n=4 Tax=Bacteria RepID=A4EBB5_9ACTN Length = 852 Score = 357 bits (917), Expect = 9e-97, Method: Composition-based stats. Identities = 146/348 (41%), Positives = 211/348 (60%), Gaps = 24/348 (6%) Query: 378 HVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRY-- 435 + + P +E + NRLRKN + KWA++EG+ CYR+YDADLP+Y+ A+D Y Sbjct: 433 DLGDGKPLPVLIPESEQFANRLRKNARLRRKWAKREGVSCYRVYDADLPDYSAAIDLYEG 492 Query: 436 -----ADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQ 490 W+V+ EYA PKTID A+ R+ DI+A +L + + K R R +G +Q Sbjct: 493 CPQTPGRWLVIAEYAAPKTIDPALAQARMLDILAIAPRILDVPAEHVHAKARMRSRGGSQ 552 Query: 491 YQKLGE------------KGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSK 538 Y K G + + E VN DYLD G+FLDHR+ R ++ + +K Sbjct: 553 YGKQGAGKGASGERANIARRRLPLIEEGGLTFAVNFDDYLDVGIFLDHRVTRNLVREHAK 612 Query: 539 G-KDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQAD 597 + FLNLF+YTG+AT +A GG T TVD+S TYL WAERN+R NG G H ++ D Sbjct: 613 QARRFLNLFAYTGTATCYAADGGVEETVTVDLSNTYLNWAERNMRQNGFVGPQHHFVRDD 672 Query: 598 CLAWLREANE---QFDLIFIDPPTFSNSKRM-EDAFDVQRDHLALMKDLKRLLRAGGTIM 653 LAW+R+ + ++DLIF+DPPTFSNS +M +DVQRDH+ L+ + RLL GG + Sbjct: 673 VLAWIRDQRQTRNRWDLIFVDPPTFSNSSKMGRRTWDVQRDHVELLAGVSRLLAQGGHAI 732 Query: 654 FSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 FS N RGFR + LA+ G+ ++IT +T+ +DFARN+++H+C+++ Sbjct: 733 FSCNLRGFRPETRKLARAGVVLEDITAQTIPEDFARNQKVHHCYIVRR 780 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 99/303 (32%), Positives = 147/303 (48%), Gaps = 20/303 (6%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +AS G E L EL+ LG + ++G F+G+ Y++ +WSRLASR+ + LG Sbjct: 2 EFYASCPEGFEPALADELKRLGLSHVRRLKGRATFEGELEEGYRACLWSRLASRVFVVLG 61 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + LY GV I W + PGAT A+ G+ + +RN+++ A++ KDA+ D Sbjct: 62 RFEAQDADGLYDGVYDIAWETIIRPGATIAITARGVTEQLRNTRFSALRAKDALCDRLAE 121 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLR----GYRDRAGIAPIKETLA 178 R +VD PD+ + + L + ASI+L LSGD L R R G ++ A Sbjct: 122 TTGRRADVDAADPDVHLLLSLRQRRASISLGLSGDPLFKRLPPAATRAGEGAHVLRPDYA 181 Query: 179 AAIVMRSGW---------------QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRW 223 A ++ + GW + L+D C G LL+EA + TDRAPG R RW Sbjct: 182 ALVLAQVGWTTLCERELTADDYENEALPTLVDASCAGGGLLLEAVNILTDRAPGAARERW 241 Query: 224 GFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGEL 283 GF GW HD A+W+++ AEA+ R E + D D + A + AG Sbjct: 242 GFEGWQLHDAALWEQLLAEARER-ETAARERQARIVAVDIDPAARKTAERMVKCAGYKRF 300 Query: 284 ITF 286 + F Sbjct: 301 VDF 303 >UniRef50_B9P9P2 Predicted protein n=14 Tax=cellular organisms RepID=B9P9P2_POPTR Length = 433 Score = 356 bits (915), Expect = 1e-96, Method: Composition-based stats. Identities = 111/322 (34%), Positives = 168/322 (52%), Gaps = 13/322 (4%) Query: 3 SLFASTARGLEELLKTE---LENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIML 59 LF A G+E L E + L + V +GGV +G R + SRLA R+++ Sbjct: 81 HLFLPCAAGVEGFLADEVHAITGLSGHDLMVGRGGVMVRGLWRDALLLNLHSRLAQRVLV 140 Query: 60 PLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDA 119 L + ++ DLY + W F+P +F + + + + + + A++VKDAI D Sbjct: 141 QLSQTLYRNENDLYRAASEVAWEIWFSPRESFKIEVTAQHSPLTSLNFAALRVKDAIADR 200 Query: 120 FTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAA 179 F + RP+V+ PD+RV++ L + A+I +D SG+ L RG+R+ G AP+KETLAA Sbjct: 201 FRDRKGVRPDVETRHPDVRVHLHLTTDEATIYIDTSGEALFKRGWREDKGDAPLKETLAA 260 Query: 180 AIVMRSGWQPG----TPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAI 235 A++ +GW P PL DP CGSGT+LIEAA +A G+ R R+ F + Sbjct: 261 AMIAATGWDPHGDDPQPLYDPCCGSGTVLIEAAQIARRIPAGILR-RFAFEKLVPFQRHV 319 Query: 236 WQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLT 295 W+ + EA+ L + YGSD R++ A+ NA AG+G+ + D Q Sbjct: 320 WEAMLDEAEAAI---LPDSPVAIYGSDVSHRMVDFAQRNAERAGVGQTVQLRGGDALQRM 376 Query: 296 NPLPKGPYGTVLSNPPYGERLD 317 P + G +L NPPYGER+ Sbjct: 377 PPCEQ--PGLMLLNPPYGERIA 396 >UniRef50_B8GQ82 Oxidoreductase n=26 Tax=Proteobacteria RepID=B8GQ82_THISH Length = 321 Score = 355 bits (911), Expect = 3e-96, Method: Composition-based stats. Identities = 140/315 (44%), Positives = 187/315 (59%), Gaps = 6/315 (1%) Query: 391 VAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTI 450 + NRL KNL+ + KWAR++GIEC+R+YD DLPE+ VA+D YA VQ + Sbjct: 3 DPTPFLNRLTKNLRHWSKWARRQGIECFRIYDRDLPEFPVAIDVYAGRPHVQAFETRWEA 62 Query: 451 DAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHL 510 D + + + I P +L K R RQKG +QY+ G V E Sbjct: 63 DEATYEAWVDAVRGTVAGLFEIPPAELAFKVRRRQKGTDQYEATGNPPAPFVVHEDGLKF 122 Query: 511 WVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMS 570 V+L YLDTGLFLDHR+ R ++ + ++ K FLNLF+YTGS TVHA GGA S+ T+D+S Sbjct: 123 EVDLHRYLDTGLFLDHRVTRALVREQARDKRFLNLFAYTGSFTVHAAAGGASSSLTLDLS 182 Query: 571 RTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRMED 627 TY +W RNLRLN L HRL + D + WL + E+FDLI +DPP+FSNSK M+ Sbjct: 183 NTYQDWTRRNLRLNDLDRPEHRLERCDVMDWLEHSSKIEERFDLIVMDPPSFSNSKAMDT 242 Query: 628 AFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDF 687 DVQRDH ++ LL A G + FSNNKRGF++ D L L ++IT+KT +DF Sbjct: 243 TLDVQRDHPWMINRALSLLTADGVLYFSNNKRGFKLYEDELIPCEL--EDITRKTTPEDF 300 Query: 688 ARNRQIHNCWLITAA 702 R+ H CW+I + Sbjct: 301 RRHPP-HRCWVIRRS 314 >UniRef50_B8FK67 Putative RNA methylase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FK67_DESAA Length = 392 Score = 353 bits (907), Expect = 1e-95, Method: Composition-based stats. Identities = 99/371 (26%), Positives = 169/371 (45%), Gaps = 6/371 (1%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 ++ F T+ GLE++ ++ +LG +GGV F+G +Y++ + LA+R+++ + Sbjct: 15 HTFFIPTSLGLEKICAKQVRSLGLEASASGEGGVTFQGKLTDMYKACLHLSLANRVLMRI 74 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 E K L V+ I W + + +SQ A +V+ AI+ Sbjct: 75 HEFKAAHFAALENAVEGIPWELYLPLSCPINFRVTARKSKLYHSQAIAERVEKAILQHL- 133 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 K R + + V + ++++D G+ LH RG+++ G API+ETLAAAI Sbjct: 134 EKYGERVEGAEEPAPQEIFVRAVSDRFTLSIDACGELLHKRGFKESEGRAPIRETLAAAI 193 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + +G+ PL+DPMCGSG EAA++A + PG +R + F W + W +++ Sbjct: 194 LEFAGYDGTLPLMDPMCGSGAFSTEAALIAANIPPGWNRD-FAFFSWPAFKKQQWLYLRS 252 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 +A+ + + + SD D G+ ++ +D+ +LT P Sbjct: 253 QAEKQFKNI---TQPLVFASDIDQNACSLLLETLESQGLDRIVKVSNEDILRLTPPKQVS 309 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD- 360 G ++ NPPYG RL + P L + L + +QF GW L+ D L A Sbjct: 310 NPGLIVVNPPYGLRLGTVPQARELFASLCNRLADQFQGWTLAALVPHKDWTPLLPFSAQP 369 Query: 361 KQYKAKNGPLD 371 Q +G L Sbjct: 370 FQKILHHGGLK 380 >UniRef50_D1R8Y2 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R8Y2_9CHLA Length = 358 Score = 353 bits (905), Expect = 2e-95, Method: Composition-based stats. Identities = 121/311 (38%), Positives = 176/311 (56%), Gaps = 7/311 (2%) Query: 395 YTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHK 454 NR+RKN + KWA++ +C+R+YD ++P+Y + +D Y V ++ + + Sbjct: 51 LGNRIRKNYRHIRKWAKRTNTDCFRIYDREIPQYPLTIDFYDGRFCVHYFSRTREKEELP 110 Query: 455 ARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNL 514 A +++ + I P+K+ KTR + K QY+K + EF V EY +NL Sbjct: 111 AELE-VEVVQVLSKIFAINPDKVFWKTRAKHKETRQYEKEDDSREFFSVLEYGVKFRINL 169 Query: 515 TDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYL 574 DYLDTGLFLDHR R+++ + GK LNLF+YT S +V A GA T +VDMS TY Sbjct: 170 LDYLDTGLFLDHRETRQLVAATANGKRLLNLFAYTCSFSVQAAAAGASFTKSVDMSNTYT 229 Query: 575 EWAERNLRLNGLTGRAHRLIQADCLAWLREA---NEQFDLIFIDPPTFSNSKRMEDAFDV 631 W E+N LN + + + +++ADCL +L + E++D+I IDPPT S SK+M+ FDV Sbjct: 230 AWGEKNFLLNKFSLKNNPVVRADCLKFLDQEIRSGEKYDIIVIDPPTISRSKKMDQLFDV 289 Query: 632 QRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNR 691 Q D++ L+ +LL G I FS N R F D A G K EI+ KTL DF + Sbjct: 290 QVDYIYLISKSLKLLSPEGVIYFSTNSRKFVFDESNFA--GCKIFEISSKTLPIDF-HDP 346 Query: 692 QIHNCWLITAA 702 +IH CW I + Sbjct: 347 KIHRCWKIVKS 357 >UniRef50_Q1DAR2 Putative uncharacterized protein n=2 Tax=Cystobacterineae RepID=Q1DAR2_MYXXD Length = 342 Score = 352 bits (904), Expect = 2e-95, Method: Composition-based stats. Identities = 139/312 (44%), Positives = 201/312 (64%), Gaps = 7/312 (2%) Query: 394 DYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAH 453 + NRLRK K+F KWAR +G+ +R+YD D+PEY A+D Y D V V EY + I + Sbjct: 33 MFANRLRKGDKRFRKWARTQGLTAFRVYDRDIPEYPYAIDVYGDRVHVVEYPRRRAIASG 92 Query: 454 KARQRLFDIIAATISVLGIAPNKLVLKTRERQK-GKNQYQKLGEKGEFLEVTEYNAHLWV 512 A + +++AA VL + ++ +KT Q G++QY ++G+ + V E WV Sbjct: 93 AADTQREEVLAAVTQVLAVPSERVFVKTHTPQPWGRSQYGRVGQDSGRIVVEEQGLKFWV 152 Query: 513 NLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRT 572 NL DYLDTGLF+DHR R + + ++GK FLNLF+YTG+ TV+A GGA ST TVD+S T Sbjct: 153 NLGDYLDTGLFMDHRNTRARVREEARGKRFLNLFAYTGAFTVYAAAGGAASTMTVDLSNT 212 Query: 573 YLEWAERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAF 629 YL+WAE NL LNGL H L++AD AW+ +A E++DL+ DPP+FS SK+M +F Sbjct: 213 YLDWAEDNLDLNGLADARHTLVRADAKAWVEAQADAPERYDLVVCDPPSFSTSKKMSGSF 272 Query: 630 DVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFAR 689 +VQRDH L+ ++ LL GG + FS N GF+++ A G++ +EIT +++ +DF R Sbjct: 273 NVQRDHPRLLAAIRALLAPGGVLYFSTNFLGFQLEPK--ATRGMEVEEITPRSIPEDFQR 330 Query: 690 NRQIHNCWLITA 701 ++IH CW + A Sbjct: 331 -KEIHRCWRMVA 341 >UniRef50_A8SGD5 Putative uncharacterized protein n=3 Tax=Ruminococcaceae RepID=A8SGD5_9FIRM Length = 439 Score = 350 bits (898), Expect = 1e-94, Method: Composition-based stats. Identities = 127/394 (32%), Positives = 178/394 (45%), Gaps = 12/394 (3%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 L A G E K EL +GA +V G + F G ++ + + R R+ML L Sbjct: 47 ELIAPCFFGCESTAKFELTRIGAENIRVEDGRLSFCGGAEMIAAANLNLRTVERVMLLLA 106 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 K + +L+ GV +I W E A F V S LN + + +K A+V + Sbjct: 107 RYKATTFDELFDGVYSIPWEEFLPADAAFPVTGSSLNSQLTSIPACQSVIKKAVVKRLMK 166 Query: 123 KNLPRPNV-DRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 R V + +V L K I LD +G+GLH RGYR A AP++ETLAA I Sbjct: 167 --GHRTTVLPESGVEYKVRFMLRKNVCEIMLDTTGEGLHKRGYRRNAMEAPLRETLAATI 224 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + + + DP CGSGTLLIEAA A + APGL R R+ ++ A+W E + Sbjct: 225 ADLGRVRRDSLVEDPFCGSGTLLIEAAQKAMNIAPGLKR-RFAAERYSFVPAALWAEQRQ 283 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 +A ++ + +G D D + +A NA+LAG+ FEV DVA Sbjct: 284 KALAESKL---DVGFEAFGYDIDPAAVAQANVNAKLAGVENRCHFEVADVATFAA----K 336 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 P VL+NPPYGERL + L LG+ M+ L +A D RA+K Sbjct: 337 PEAIVLTNPPYGERLGTIEGAAKLARTLGQQMEAS-PCAGLYAITADMDFELHYGKRANK 395 Query: 362 QYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDY 395 + K NG + C Y+ A T M + Sbjct: 396 RRKMYNGMIPCQLYMYYNAPKTEKMAKPMPKSGF 429 >UniRef50_C2BEE4 Site-specific DNA-methyltransferase (Adenine-specific) n=2 Tax=Anaerococcus RepID=C2BEE4_9FIRM Length = 373 Score = 348 bits (894), Expect = 3e-94, Method: Composition-based stats. Identities = 108/378 (28%), Positives = 178/378 (47%), Gaps = 10/378 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M + ST+ GLE L+K +L++LG + +V G + +GD + + + R A R+ L Sbjct: 1 MEKILISTSFGLESLVKFQLKDLGYKDFKVSDGLISLEGDLSDLAKLNINLRHADRVYLE 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L K +L+ V+ I+W ++ N + F V+ + + + + AI+D Sbjct: 61 LASFKAMDFEELFENVKKISWQDILNEDSNFIVNARTYKSKLFSLRSIQSISEKAIIDKL 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + ++ A + + + + + LD SG+GLH RGYR+ + AP++E LAAA Sbjct: 121 K-VYYKKSFFEKKAERVNIEIMIENNLVRVCLDTSGEGLHKRGYRENSVKAPLRENLAAA 179 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +V S + P L D CGSGT+LIEAA +A + APG+ R + F+ + + +++ K Sbjct: 180 LVDLSFYNPDRFLFDGFCGSGTILIEAARIARNIAPGIDRD-FDFTSFKFINPKFFKDAK 238 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 EA + + GSD R I A+ NA AG+ E I+F +D + Sbjct: 239 KEAMDKID---YSKKLNILGSDISGRAISLAKQNAINAGVEEDISFITRDFGSV---AIS 292 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 YG +SNPPYG RL S+ L ++ + + W+L +A + Sbjct: 293 NDYGVFISNPPYGLRL-SDTDLSEIYKKINHKL-AGLDTWSLYFITADDKFDRQFKRVLS 350 Query: 361 KQYKAKNGPLDCVQKNYH 378 K+ K NG Y Sbjct: 351 KKRKLYNGGQKVDFYQYF 368 >UniRef50_Q6MHD5 Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHD5_BDEBA Length = 305 Score = 347 bits (891), Expect = 7e-94, Method: Composition-based stats. Identities = 144/311 (46%), Positives = 196/311 (63%), Gaps = 10/311 (3%) Query: 393 EDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDA 452 + NRL KN KK + WA + IE YRLYD D+PEY VD Y D ++ + + + ++ Sbjct: 2 DMIKNRLEKNYKKLKNWAERAQIEAYRLYDRDIPEYPYIVDIYKDHFLIYDKSDLRDLE- 60 Query: 453 HKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWV 512 + L + A ++ +K+V+K RERQ+G QY+KL K E V E A L V Sbjct: 61 ---KNHLPHVQEALKALFKCDDSKIVIKKRERQEGLKQYEKLDAKEETFVVRESQALLKV 117 Query: 513 NLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRT 572 NL DYLDTGLFLDHR R+ + + K K FLNLF YTGS +V A LGGA TT+VDMS+T Sbjct: 118 NLYDYLDTGLFLDHRPMRQKVFKSVKDKKFLNLFCYTGSVSVFAALGGAI-TTSVDMSQT 176 Query: 573 YLEWAERNLRLNGLTGRAHRLIQADCLAWLR--EANEQFDLIFIDPPTFSNSKRMEDAFD 630 YL WA+ N +LN L H I AD L WLR ++ FD+IF+DPPTFSNSK+M+D F+ Sbjct: 177 YLRWAQENFQLNNLDPAKHNFINADVLEWLRNTKSPNTFDVIFLDPPTFSNSKKMDDTFE 236 Query: 631 VQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARN 690 V+RD L++ +LR G + FSNNKR F++ L+K K +EIT +++ QDF + Sbjct: 237 VERDQEFLVESCMNMLRPEGILYFSNNKRKFKISPAVLSK--YKVKEITAESIPQDF-HD 293 Query: 691 RQIHNCWLITA 701 ++IHNC+ I + Sbjct: 294 KKIHNCFEIRS 304 >UniRef50_A3UEM0 Putative uncharacterized protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UEM0_9RHOB Length = 387 Score = 346 bits (888), Expect = 2e-93, Method: Composition-based stats. Identities = 108/373 (28%), Positives = 173/373 (46%), Gaps = 17/373 (4%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +F + GLE L +EL G +C+ QGGV KG V+++ + R A+R++ L Sbjct: 24 DIFLACPPGLESALASELAENGFAKCRPEQGGVTIKGGWAEVWRANLQIRGATRVLAVLD 83 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 K L + W E+F+ G V S I + A +V +AI Sbjct: 84 RFKCQHLNQLEQLARQTPWPELFHAGTPVKVEASCRKSRIYHDGAAAERVANAIARTALV 143 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 RD +I V V + + ++++D SG+ LH RGY+ AP++ET+AA ++ Sbjct: 144 AI-------RDDAEITVRVRIDHDVVTLSVDSSGEPLHKRGYKQAVAKAPLRETMAALLL 196 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 G+ PLLDP+CGSGT +IEAA LA APG RG + F +A D + ++ Sbjct: 197 REMGYDGRAPLLDPVCGSGTFVIEAAQLAAGLAPGRARG-FAFERFASFDRDAFMALRN- 254 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 R A + +G D D ++ A+ NA A + + +TF + L P Sbjct: 255 -----RAPHARSDAPCFGFDRDPGAVRMAKENAERAEVSDRVTFSEGGLKDLKRP--DCA 307 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 G V++NPPYG R+ + A+ ++ G +M++QF GW + + + L ++ Sbjct: 308 PGWVVANPPYGARVGDKSAVFGVYKTFGAVMRDQFSGWRAAFITTDEKMAKATGLAFERT 367 Query: 363 Y-KAKNGPLDCVQ 374 +G L Sbjct: 368 SAPIDHGGLKIRL 380 >UniRef50_B7QQX4 RNA methylase family protein n=35 Tax=Rhodobacterales RepID=B7QQX4_9RHOB Length = 376 Score = 345 bits (885), Expect = 4e-93, Method: Composition-based stats. Identities = 101/379 (26%), Positives = 171/379 (45%), Gaps = 20/379 (5%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +F + GLE+ L E + LG E + V GGV +G V+++ + R A+R++ +G Sbjct: 8 EIFLTAPPGLEQTLLHEAKELGFAEPKTVPGGVTVQGGWPDVWRANLCLRGAARVLARIG 67 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSG-LNDTIRNSQYGAMKVKDAIVDAFT 121 + + L + W+E+ V + I ++ +++ AI + Sbjct: 68 SFRAFHLAQLDKRARKFPWSEVLRADVPVRVETTTNKKSKIYHAGAATQRIERAITEELG 127 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 + I + + + + ++D SG+GLH RG++ G AP++E LAA Sbjct: 128 AEI-------SAEAGITIKLRIEDNLCTFSVDTSGEGLHKRGHKTAVGKAPMRENLAALF 180 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + G+ P++DPMCGSGT +IEAA +A PG R + F A D W ++ Sbjct: 181 LRDCGYTGTEPVVDPMCGSGTFMIEAAEIARGLLPGRSRN-FAFEQLATFDADAWAAMRD 239 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL--P 299 + YGSD +A ++ A NA AG+ +L+ + V+ LT P Sbjct: 240 ------VTTTQDTDVWCYGSDRNAGAVEMAAANAERAGVADLVQITQQAVSDLTPPDLGE 293 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 G V+ NPPYG R+ ++ L AL++ LG +K++F GW + + ++ L L Sbjct: 294 GEQPGLVIVNPPYGARIGNKKLLYALYAALGETLKSRFSGWRVGIVTSETSLAKATDL-P 352 Query: 360 DKQY--KAKNGPLDCVQKN 376 Y +G L Sbjct: 353 FLPYGPPVAHGGLKIRLFK 371 >UniRef50_C7PR68 Methyltransferase type 11 n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PR68_CHIPD Length = 315 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 125/311 (40%), Positives = 182/311 (58%), Gaps = 5/311 (1%) Query: 393 EDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDA 452 + NRL K K K AR++ I C+R+YD D+PE+ +++ Y D + V EY +D Sbjct: 8 QMLENRLLKVYKHLRKTARRQNITCFRVYDDDIPEFPFSIELYEDHIYVAEYHRQHGMDE 67 Query: 453 HKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGK-NQYQKLGEKGEFLEVTEYNAHLW 511 + L + VL + K+ +K R+R+ + QY+KL + + E Sbjct: 68 EAHEEWLDLCLEVISKVLEVPLEKIFVKQRQRKASRQEQYEKLSFESHEMVANEAGLKFK 127 Query: 512 VNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSR 571 VNL+DYLDTGLFLDHRI R M+ + S GK LNLF YTGS +V+A G A T+VD+S+ Sbjct: 128 VNLSDYLDTGLFLDHRITRGMVREQSAGKKVLNLFCYTGSFSVYAAAGNAAQVTSVDLSK 187 Query: 572 TYLEWAERNLRLNGLTGRAHRLIQADCLAWLREAN-EQFDLIFIDPPTFSNSKRMEDAFD 630 TYL WAE N++LN H+ + AD L +L E FDL+ +DPPTFSNSKRM++ D Sbjct: 188 TYLAWAEENMKLNDFDVSKHQFVHADVLQYLDTLPAETFDLVVLDPPTFSNSKRMKEFLD 247 Query: 631 VQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARN 690 +QRDH++++ + R GG I FSNN R F ++ D + L + ++IT +T+ DF + Sbjct: 248 IQRDHVSILNKVLAATRPGGVIYFSNNYRRFVLEADRI--LASEIKDITSQTIPFDFQQ- 304 Query: 691 RQIHNCWLITA 701 + I C+ I Sbjct: 305 KLIRKCYRIVR 315 >UniRef50_A4SA02 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4SA02_OSTLU Length = 419 Score = 341 bits (875), Expect = 5e-92, Method: Composition-based stats. Identities = 104/419 (24%), Positives = 183/419 (43%), Gaps = 42/419 (10%) Query: 3 SLFASTARGLEELLKTELEN--LGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 +A+ GLE+++ EL + + A + + + GV F G R+ Y + +W R A R+++ Sbjct: 1 RFYATCHPGLEDVVARELASPMINASDIVIGKSGVSFTGTQRVGYDANVWLRSAVRVLVE 60 Query: 61 LGECK----VYSDLDLYLGVQ-AINWTEMFN-----PGATFAVHFSGLN-DTIRNSQYGA 109 L V +Y V+ A+ W E+ G F V + I +S Sbjct: 61 LKRGYLDPYVSGTQSVYEFVKHAVPWEEVIPGGERGDGLKFGVETRLWDCSQITSSHAAK 120 Query: 110 MKVKDAIVDAFTRKNLPRPNVDRD--APDIRVNVWLHKETASIALDLSGDGLHLRGYRDR 167 ++VKDA+ DA RP+ + A D+ + V L+++ + D+SG+ LH RGYR+ Sbjct: 121 IRVKDAVCDALVDATGTRPSPPDNYAAADVPLYVTLYRDEIIMYRDMSGESLHRRGYRNA 180 Query: 168 AGIAPIKETLAAAIVMRSGW-------------QPGTPLLDPMCGSGTLLIEAAMLATDR 214 A + E+ AA ++ +GW P L+DPMCGSGT LIE A++A + Sbjct: 181 MHRASLSESAAAGMLSLAGWPDMLEEWQRDPAGSPPPVLIDPMCGSGTFLIEGALMAANV 240 Query: 215 APGLHRGR---WGFSGWAQHDEAIWQEVKAEAQT--RARKGLAEYSSHFYGSDSDARVIQ 269 APGL R + F W H+ ++E A+ + G+D + Sbjct: 241 APGLIRSETIGYAFERWPDHNPRTFEECLENARRIGAETRTAVPTPPVIIGNDIHPGAVT 300 Query: 270 RARTNARLAGIGELITFEVKDVAQLT-------NPLPKGPYGTVLSNPPYGERL--DSEP 320 A + A + +I D + V++NPP+G+R+ Sbjct: 301 LAGQGSETARVAGMIDVFRNDCEMFNITASSAGAKIAPNAPKLVVTNPPWGKRIGAGEPA 360 Query: 321 ALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHV 379 + + LG +K + + + S +P++ +++RA +++ G +DC Y + Sbjct: 361 GRRRVWNSLGVFLKRECPDSSAFVLSGNPEVSRAIRMRASRKHVVGIGGVDCRLLRYDI 419 >UniRef50_D0LH66 Oxidoreductase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LH66_HALO1 Length = 365 Score = 337 bits (866), Expect = 7e-91, Method: Composition-based stats. Identities = 132/310 (42%), Positives = 175/310 (56%), Gaps = 6/310 (1%) Query: 392 AEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTID 451 AE NRLRK + KWAR+ G+ CYRLYD D+PE +A+D Y + V + Y + Sbjct: 61 AEMLGNRLRKRARHLRKWARRRGVSCYRLYDRDIPEIALAIDLYGERVHIASYRRRRDYG 120 Query: 452 AHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLW 511 + AT LG+ + LK R RQ+G QY++L E V E LW Sbjct: 121 PA----WRAAMAQATADALGVERELVYLKERRRQRGSAQYERLERSRERFAVREGACELW 176 Query: 512 VNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSR 571 VNL DYLDTGLFLDHR R + ++G FLNLF YTG+ TVHA GAR + +VD+S Sbjct: 177 VNLRDYLDTGLFLDHRDTRARVAAEAEGTRFLNLFCYTGAFTVHAAAAGARQSVSVDLSH 236 Query: 572 TYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDV 631 TYL+W NL LNGL AHR ++ D +L FDL +DPPTFSNSK+M D D+ Sbjct: 237 TYLDWTRDNLELNGLDTDAHRQVREDVFTYLHGERLAFDLAVLDPPTFSNSKKMRDVLDI 296 Query: 632 QRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNR 691 QRDH+ L+ LL GG + FS R F+++ + L + + +IT +T +DF R Sbjct: 297 QRDHVELIARTLDLLVPGGVLYFSTGYRRFKLEREAL-RGARRIDDITAETTPEDF-RGH 354 Query: 692 QIHNCWLITA 701 + H CW + Sbjct: 355 RPHQCWRLVR 364 >UniRef50_A0LJ49 Putative RNA methylase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LJ49_SYNFM Length = 411 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 109/381 (28%), Positives = 169/381 (44%), Gaps = 19/381 (4%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 ++ A T L L + E E G + GV F G+ Y++ +W R ASRI+ Sbjct: 27 VHRFAAVTPPELAALCRQEAEMAGFDVTGLSDAGVEFTGNFGACYEANLWLRTASRILCR 86 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L + +L+ V I W N V + I + V D + F Sbjct: 87 LPAFRAGVREELFGKVSGIPWELWLNRSVPVRVETHVEHSRINHEGMVLETVLDGLRRRF 146 Query: 121 TRKNLPRP------------NVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRA 168 K + P D ++ R+ V L + ++LD +GD LH RGYR R Sbjct: 147 REKGIVPPPEWDRSRGQPGSESDENSRKQRILVRLVRNHCELSLDTTGDHLHRRGYRMRH 206 Query: 169 GIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGW 228 API+ETLAAAI+M++GW TPL+D MCG+GT +EAA+LA PGL R + F W Sbjct: 207 AGAPIRETLAAAILMKAGWNGNTPLVDGMCGAGTAAVEAALLARRMPPGLGRS-FLFQSW 265 Query: 229 AQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEV 288 + E W+ + +A+ + A ++ D D R + AR NAR A + I + Sbjct: 266 PSYREKTWEFLLRKAREKM---SAHPAAPIVALDRDPRALAVARENARKAHTEKEIIWRE 322 Query: 289 KDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSAS 348 +D G ++ +PPYG+RL H LG ++ + GW +++ Sbjct: 323 EDFFDFQPARMGLSEGLLILDPPYGKRLPGPD--RGFHERLGAHLRRLYTGWRIAVLCPE 380 Query: 349 PDLLSCLQLRADKQYKAKNGP 369 + +RA + ++ +G Sbjct: 381 RGIA-VTGIRAVRYWRIVHGG 400 >UniRef50_Q04XY1 SAM-dependent methyltransferase n=4 Tax=Leptospira RepID=Q04XY1_LEPBL Length = 335 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 137/313 (43%), Positives = 193/313 (61%), Gaps = 9/313 (2%) Query: 393 EDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDA 452 + NRL + K ++KWAR+ GIEC+R+YD D+P+ V+VD Y + + Y I Sbjct: 20 AMFRNRLLRMSKHWKKWARKRGIECFRIYDRDIPQVPVSVDLYGPYCQISAYKNSYEISD 79 Query: 453 HKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWV 512 + +I L + + K RE +KGK QY+K E+ + LEVTE ++ Sbjct: 80 ETRERENVEIRQIVAETLNLDAGFIFWKKREPKKGKKQYEKQSEQSKLLEVTENGLRFYI 139 Query: 513 NLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRT 572 NL+DY+DTGLFLDHRI R ++ + SKGK FLNLFSYTGS TV+A GGA + ++D+S T Sbjct: 140 NLSDYIDTGLFLDHRITRDLIRKESKGKKFLNLFSYTGSFTVYAASGGATQSLSIDLSNT 199 Query: 573 YLEWAERNLRLNGLTGRAHRLIQADCLAWL-----REANEQFDLIFIDPPTFSNSKRMED 627 YL WAE NL+LNGL+ HRL++AD + WL + E++DLI +DPPTFSNSK+M Sbjct: 200 YLAWAEENLKLNGLSLIKHRLLRADVVEWLYNERKKPDRERYDLIVLDPPTFSNSKKMTG 259 Query: 628 AFDVQRDHLALMKDLKR-LLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQD 686 FD+Q+DH+ ++ L R G + FS N R F +L + L ++IT+ TL D Sbjct: 260 IFDIQKDHVEILNILYRDFALPGAVLYFSTNFRKF--ELSQTSVLWNNPKDITKMTLPDD 317 Query: 687 FARNRQIHNCWLI 699 F RN++IH CW + Sbjct: 318 F-RNQKIHFCWKM 329 >UniRef50_C0QIM2 Putative N6-adenine-specific DNA methylase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QIM2_DESAH Length = 391 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 95/372 (25%), Positives = 165/372 (44%), Gaps = 10/372 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAV--ECQVVQGGVHFKGDTRLVYQSLMWSRLASRIML 59 + FAST GL+++L E L + +GGV F G + Y + ++ ASRI + Sbjct: 19 QTFFASTTPGLKQILAAEFAALPLETEHFTMAEGGVVFTGPMKSCYLANLYLGTASRITM 78 Query: 60 PLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDA 119 + E K + L + + W + V + + + +++ + I D Sbjct: 79 EVAEFKAENFRTLEKKLAQVEWELFLKKRSHIHVEATTHHSRLYHTRAIEERAVQIIQDH 138 Query: 120 FTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAA 179 ++ P ++ + + + I+LD SGD LH RG G+AP++ TLA Sbjct: 139 L---DMAAPESPGAPASYKILIRVRDDRFFISLDTSGDLLHKRGLTSAVGMAPLRSTLAR 195 Query: 180 AIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 +I++R+G+ PL+DPMCGSG+ L+E AM+A+ PG +R ++ F + +A W + Sbjct: 196 SILIRTGFSGREPLMDPMCGSGSFLVEGAMMASQIPPGFYR-QFAFEHFPCFSQAQWNHL 254 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 K A+ R + +G D +I G L+ + +D L Sbjct: 255 KKTAEKNFRNVE---TPLIFGFDQAGNLIAGLEQTLSDHGFSGLVQVDKQDFFDLGPKDF 311 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 G V+ NPPYG+RL + + +G + F GW + + P+L L A Sbjct: 312 TDQAGVVVLNPPYGKRLGEKGETAEFYKRIGDKLARNFQGWRVGILLPEPELARELPF-A 370 Query: 360 DKQYKAKNGPLD 371 + + +G L+ Sbjct: 371 VELHPLFHGGLE 382 >UniRef50_Q1CZM0 RNA methylase family protein n=2 Tax=Cystobacterineae RepID=Q1CZM0_MYXXD Length = 383 Score = 332 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 119/378 (31%), Positives = 179/378 (47%), Gaps = 17/378 (4%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 LF ST GLE L+ E LG + + V GGV +G L + + R ASR++L LG Sbjct: 13 QLFVSTLPGLEPALEAEASALG-WKPRRVDGGVELEGPAGLHQDANLRLRCASRVLLRLG 71 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + L + ++ + +++ + + S + G V A A+ Sbjct: 72 HFRAGDSDTLSDRLAELDLSHVWDGRSPPKLSVSLNRSPV----PGPDVVFSAAAYAWNV 127 Query: 123 KNLPRP---NVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAA 179 ++ R + + P + + V + + +++ D SGD LH RGYR AP++ETLAA Sbjct: 128 PSVERAGPLDEEGGGPGLTLLVRVDGDAFTVSADTSGDALHRRGYRQEVSRAPLRETLAA 187 Query: 180 AIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 I+ +G+ PL+DPMCGSGT L+EAA +A RAPGL R + F + D W Sbjct: 188 GILRLAGYDGTQPLVDPMCGSGTFLVEAAWMAMRRAPGLLRA-FAFESFPSFDAQAWAGR 246 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 KA A+ A L + +G D +A + AR NAR AG+ + E +D L P+ Sbjct: 247 KARAEADA---LPAPGAAIHGYDINAGSLGTARRNARRAGV--TLALERQDARTLKAPV- 300 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASP-DLLSCLQLR 358 G V+ NPPYG+R+ L AL+ LG ++ F GW ++ L+ L L Sbjct: 301 -KGPGLVVVNPPYGKRVGEAEDLPALYRALGNTLRQGFAGWRAAVILPDEAALVKALGLT 359 Query: 359 ADKQYKAKNGPLDCVQKN 376 + KNG L C Sbjct: 360 GARSLPVKNGGLKCRLLL 377 >UniRef50_B0S9B9 N6-adenine-specific DNA methylase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0S9B9_LEPBA Length = 358 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 115/368 (31%), Positives = 181/368 (49%), Gaps = 12/368 (3%) Query: 17 KTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGV 76 + E+ + +GGV F G V Q + ++ ASR+ L L + + Y Sbjct: 2 EQEILSFHLKINNSNRGGVFFSGKKEDVIQFAIHTKFASRVNLQLLHENAQNYDEFYSKA 61 Query: 77 QAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPD 136 + W + PG +F++ D ++NS++ ++KDAI+D + + P + + D Sbjct: 62 IELPWEKYIGPGVSFSIDAE-TKDKLKNSEFSMHRMKDAILDRLRSQKVALPEIQKRMAD 120 Query: 137 IRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDP 196 + + V H + SI L LSGD + RGYR AG AP++E +A A++ S W+ G LLDP Sbjct: 121 VTIVVRSHTDRFSIELSLSGDPVGRRGYRLHAGNAPVREPIAQAMLELSEWKEGDTLLDP 180 Query: 197 MCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSS 256 MCGSGT+LIEAA+ +R G R+ F+ I+Q + RK + Sbjct: 181 MCGSGTILIEAAL--RERLYG-EINRFLFAESP-----IFQILFPTYVFSERKKENPTTP 232 Query: 257 HFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERL 316 H +G D D I+ A+ NA AG+ + I FEV D L N G G +++NPPYG+R+ Sbjct: 233 HLFGFDIDPEAIRIAKENAYEAGVEDFIKFEVGDCLALKNAF--GSKGHLVTNPPYGDRI 290 Query: 317 DSE-PALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQK 375 L ++ GR++KN+FGGW ++ A L L+ +K K+ L Sbjct: 291 GKPMEDLREMYFQFGRVLKNEFGGWKFTVLCADFSLFGKFGLKENKHISLKHANLKAKIV 350 Query: 376 NYHVAEST 383 +Y + Sbjct: 351 DYELRGGK 358 >UniRef50_C8PND5 Putative uncharacterized protein n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PND5_9SPIO Length = 358 Score = 331 bits (849), Expect = 5e-89, Method: Composition-based stats. Identities = 129/346 (37%), Positives = 189/346 (54%), Gaps = 30/346 (8%) Query: 383 TPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD----- 437 SK A + NRL K K +K+AR+ GI YRLYD D+PE VAVD Y + Sbjct: 1 MTPSKSPQQAALFYNRLVKRYKHLKKYARRLGIFAYRLYDRDIPEIPVAVDLYIEDVTGL 60 Query: 438 -WVVVQEYAPPK----TIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQ 492 + V+ EY T K L ++ A + L I+P ++ K R+RQ+G+ QY+ Sbjct: 61 IFAVLTEYERSTDHNYTTKEGKTAASLSELTEALCAALQISPAQVYEKCRKRQRGEAQYE 120 Query: 493 KLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSA 552 K+ + G+ + V E ++N++DYLDTGLFLDHR AR + + + GK LNLF YT S Sbjct: 121 KIADSGKRIIVREGKCRFFINVSDYLDTGLFLDHRPARIAVAESAAGKMVLNLFCYTASF 180 Query: 553 TVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAH-RLIQADCLAWLR---EANEQ 608 +VHA + GAR +VD+S+ YL+WA +N +LNG+ A +Q+D +L + E+ Sbjct: 181 SVHALVSGARQVCSVDLSKNYLQWAYQNAQLNGVDDPARCTFVQSDVRLFLEQAAKRKER 240 Query: 609 FDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGL 668 +D+I DPPTFSNSKR FDV R L++ ++L A G + FS N R R + L Sbjct: 241 WDIIICDPPTFSNSKRTPQFFDVNRHWQDLIRSCCKVLSAEGVLYFSTNSRTLRFNAAEL 300 Query: 669 AKLG---------------LKAQEITQKTLSQDFARNRQIHNCWLI 699 + Q+I+ +++ +DF RN++IH W I Sbjct: 301 SDRPSGTAGKDRFVYQNMLFTVQDISAQSIPEDF-RNKKIHRLWKI 345 >UniRef50_Q6MCL8 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MCL8_PARUW Length = 333 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 119/311 (38%), Positives = 180/311 (57%), Gaps = 7/311 (2%) Query: 395 YTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHK 454 TNR+RKN + KWA++ C+R+YD ++ +Y +A+D Y V ++ + + Sbjct: 22 LTNRIRKNYRHIRKWAKRTQTNCFRIYDKEIHQYPLAIDFYDGRFCVHYFSKAANDNDYD 81 Query: 455 ARQRLFDI-IAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVN 513 + L + I A ++ + + +TR ++K QY++ G EF + E+ VN Sbjct: 82 PPKELKEATIHALKTIFNVEEELIFWRTRSKRKETRQYERQGNAKEFFSIVEFGVQFKVN 141 Query: 514 LTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTY 573 L DYLDTGLFLDHR R+M+ Q S K LNLF+YT S +VHA GA T +VDMS TY Sbjct: 142 LIDYLDTGLFLDHRETRKMVTQASINKKLLNLFAYTCSFSVHAAASGAIFTKSVDMSNTY 201 Query: 574 LEWAERNLRLNGLTGRAHRLIQADCLAWLREANE---QFDLIFIDPPTFSNSKRMEDAFD 630 EW + N RLN L+ + + +I+ADCL +L + + Q+D+I IDPPT S SK+M+ FD Sbjct: 202 TEWGKDNFRLNSLSLQNNEVIRADCLKFLDDEIKKNLQYDVIVIDPPTISRSKKMDQLFD 261 Query: 631 VQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARN 690 +Q D+++++ +LL+ G I FS N R F + L L Q+++ KT+ DF + Sbjct: 262 IQVDYVSMLSKALKLLQKDGVIFFSTNFRKFVFN-QTLFPFCL-IQDVSHKTIPIDF-HD 318 Query: 691 RQIHNCWLITA 701 +IH CW I Sbjct: 319 SKIHRCWKIIK 329 >UniRef50_Q73LF1 Putative uncharacterized protein n=1 Tax=Treponema denticola RepID=Q73LF1_TREDE Length = 335 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 137/332 (41%), Positives = 196/332 (59%), Gaps = 18/332 (5%) Query: 386 SKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRY---------A 436 K AE + NRL+K K KWA++EG+ YRLYD D+PE +AVD Y Sbjct: 2 QKNQYQAELFKNRLQKRFKHLLKWAKREGVFAYRLYDKDIPEIPLAVDIYFAETEETEKR 61 Query: 437 DWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGE 496 ++++ Y P + R+ L I A S L I ++ +K RE+QKGK+QY+K G Sbjct: 62 AFLLIYLYKRPYEKSQEEEREWLLVIEEAASSSLLIPKERIFIKLREKQKGKSQYEKAGS 121 Query: 497 KGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHA 556 + V E +VN+ DYLD+GLFLDHR AR M+ + +K K LNLFSYTGS +VHA Sbjct: 122 SKNLIRVKEGECFFYVNVEDYLDSGLFLDHRPARSMVFKEAKNKKVLNLFSYTGSFSVHA 181 Query: 557 GLGGARSTTTVDMSRTYLEWAERNLRLNGL-TGRAHRLIQADCLAWLREA---NEQFDLI 612 GGA S +VD+S TYL WA+ NL+LN L +LI++D + +L++A +++DLI Sbjct: 182 AKGGAASVDSVDLSNTYLNWAKENLKLNKLFDEEKTQLIKSDVIVFLKKAIEEQKKWDLI 241 Query: 613 FIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGL---A 669 DPPTFSNSK D FDV RD L L ++L G + FS N + + D L + Sbjct: 242 ICDPPTFSNSKS-ADIFDVNRDWLKLCLLCLKVLSKNGKLYFSTNSQKIKFDEAELINFS 300 Query: 670 KLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 + ++ ++IT+ ++ +DF RN++IH W+I A Sbjct: 301 EQKIRVKDITKASIPEDF-RNQKIHKMWMIEA 331 >UniRef50_C8PM90 RNA methylase family protein n=2 Tax=Treponema RepID=C8PM90_9SPIO Length = 396 Score = 327 bits (839), Expect = 8e-88, Method: Composition-based stats. Identities = 110/403 (27%), Positives = 168/403 (41%), Gaps = 31/403 (7%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRL-----VYQSLMWSRLAS 55 M A A G E +L EL+ L + G V F T V ++ + R A Sbjct: 1 MLEFLALCAVGAEPILSNELKLLNFKPVNRLPGRVFFTPATADPEVVSVMRANFYLRTAD 60 Query: 56 RIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGL-NDTIRNSQYGAMKVKD 114 R+ L L E + LY V A++W F+ + V + + V Sbjct: 61 RMYLVLKEFTADNFDTLYDTVAAVDWQRFFSKDSKITVDKVRTFKSKLASEHAVQRAVHK 120 Query: 115 AIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIK 174 A+ + + + + +++ + LDLSG+ LH RGYR G AP++ Sbjct: 121 AVCSSLCSAWKMDV-LPETGREYTIRIYIEHNRVYLLLDLSGEPLHRRGYRLSGGAAPMR 179 Query: 175 ETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEA 234 ETLAA ++ W+ PL D CGSGT+ IEA A + PG+ R + F +A + Sbjct: 180 ETLAAVLLQCMQWKRKLPLHDAFCGSGTIPIEAVWYAYNIPPGIGRS-FAFETFACYSSK 238 Query: 235 IWQEVKAEAQTRARKGLA-EYSSHFYGSDSDARVIQRARTNARLA-----------GIGE 282 +++ E + R + + GSD+D ++ A+TNA A G Sbjct: 239 KDRQLIEEERRRGALNIRTDCLVRVSGSDNDPEAVRLAQTNAERACMLAGKALQRIGKDN 298 Query: 283 LI---TFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGG 339 I F D ++L+ P P+ G +LSNPPYG+RL E I L+ + + F Sbjct: 299 RIPRPEFIQADFSELSAPYPE---GVLLSNPPYGDRLGDEQDAIELYEKM-TAIPQDFQN 354 Query: 340 WNLSLFSASPDLLSCLQLRAD---KQYKAKNGPLDCVQKNYHV 379 W L + P LRA K+ K+G LD Y + Sbjct: 355 WRLGFITDKPAFADIF-LRAGITLKKRPLKSGNLDTCLYYYGL 396 >UniRef50_Q0F3C8 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3C8_9PROT Length = 376 Score = 326 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 117/368 (31%), Positives = 181/368 (49%), Gaps = 14/368 (3%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 N FA T G+E + EL L A E + GGV F + + + +R +R++L L Sbjct: 12 NHFFAITPPGMEAIAAAELAALSAHEINPIAGGVEFTASMDTMMRINLRARCITRVLLRL 71 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 K S +LY + I+W G+ A+ S + +S V DAI D Sbjct: 72 ASFKALSFPELYNKSKRIDWQRYLAEGSAVALRASCHGSRLLHSGRVEQAVFDAIRDGSI 131 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 + D ++ V + K+ +I++D SG+ L RGYR +G+AP++ET+AAAI Sbjct: 132 QVT-----AGEDEGGQQILVRVDKDQCTISIDCSGERLDRRGYRLHSGMAPLRETIAAAI 186 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + WQP LL PMCGSGT IEAA++A +A G + F W E WQ VK Sbjct: 187 LQWIDWQPEEVLLTPMCGSGTFAIEAALMAAKKAAG-STHDFAFLHWPCLKEKRWQRVKE 245 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 +++ + + SD D R++ +AR NA AG+ LI + V D+A+L +P Sbjct: 246 KSEAMV---VGQPKVQILASDLDGRMLAQARQNANDAGVAGLIDYSVLDIAKL---MPTA 299 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 G +L NPPYG R+ E A+++ LG++ + +F GW + + L + + Sbjct: 300 ANGLILVNPPYGGRI--EADARAVYAQLGKLFRERFSGWRMVVVVPDQGCERALAMPVKR 357 Query: 362 QYKAKNGP 369 + K K+G Sbjct: 358 RLKVKHGG 365 >UniRef50_C1A5B5 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5B5_GEMAT Length = 406 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 110/383 (28%), Positives = 165/383 (43%), Gaps = 17/383 (4%) Query: 5 FASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGEC 64 F A GL L+ E LG +V GV + R ++ WSRLASR+++ L Sbjct: 22 FLIAAPGLAPLIAAECTTLGITPVEVTAAGVAVQVTPRELFTINCWSRLASRVIVRLAHF 81 Query: 65 KVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT--- 121 L + WT + +P + + + +S A +V IV+A Sbjct: 82 DARDFATLEKQAARVPWTRVISPAVPVQLRVTCRKSRLYHSDAVAERVARGIVNAVPNAQ 141 Query: 122 --------RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPI 173 + + DAP + V ++ I+ D SG LH RG+R AP+ Sbjct: 142 ILGAAAKDEDDELSETLAPDAPTQLIVVRFERDHCVISADSSGTLLHRRGWRQAIAKAPL 201 Query: 174 KETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDE 233 +ETLAA ++ W PL+DP GSGT+ IEAA+ APGL R + W D Sbjct: 202 RETLAAVMLAAMPWDGEIPLVDPFAGSGTIGIEAALRVRRIAPGLTRS-FAMEHWPDADA 260 Query: 234 AIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQ 293 ++ V+ AQ + R + D DA I AR NA AG+ +T E +++ Sbjct: 261 SMHAGVRESAQQQVRPSIG---VPIVLRDRDAGAIVAARANAERAGVLADVTIEQGALSE 317 Query: 294 LTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSAS-PDLL 352 T G G +L+NPPYG R+ L L++ LG +++ GW L++ + LL Sbjct: 318 -TELAQYGARGLLLTNPPYGHRIGDGADLRGLYARLGDVLRVGGRGWRLAMLMPNDRALL 376 Query: 353 SCLQLRADKQYKAKNGPLDCVQK 375 L+L + NG L Sbjct: 377 GQLRLSVSPLLRTSNGGLPVALL 399 >UniRef50_B0SEV3 SAM-dependent methyltransferase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SEV3_LEPBA Length = 327 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 133/315 (42%), Positives = 191/315 (60%), Gaps = 9/315 (2%) Query: 393 EDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDA 452 + NRLRK K+ EKWA++E I CYR+Y D+P+ +DRY + +V+ + + + Sbjct: 10 TMFENRLRKLKKEREKWAKRENINCYRIYSEDIPQIPFILDRYPNGLVLYDKSSLRFQAE 69 Query: 453 HKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWV 512 RL +I+ + V I NKL LK R++QKG +QY+K +G F TE N + Sbjct: 70 TDHDARLKEIVRIVMEVFQIPENKLFLKQRKKQKGLDQYEKFSIEGNFFWTTEANLEFRI 129 Query: 513 NLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRT 572 NL+DYLDTGLFLDHRI R L + SK K LNLFSYTG+ +V+A GGA T ++D+S+T Sbjct: 130 NLSDYLDTGLFLDHRITRSWLKEKSKNKSVLNLFSYTGAFSVYAASGGASKTKSIDLSKT 189 Query: 573 YLEWAERNLRLNGLTGRAHRLIQADCLAWLREA-----NEQFDLIFIDPPTFSNSKRMED 627 Y +WA +NLR NG G H++I AD L W+ E E++D IF+DPPTFSNSK+M + Sbjct: 190 YCDWAVQNLRRNGFEGSNHKIINADILKWIEEESKNPNRERYDFIFLDPPTFSNSKKMYE 249 Query: 628 AFDVQRDHLA-LMKDLKRLLRAGGTIMFSNNKRGFRM--DLDGLAKLGLKAQEITQKTLS 684 ++VQ H L+ L + L G I FS N R F+M + + + G + T++++ Sbjct: 250 EWEVQTKHRNLLLLLLTKFLSDKGEIWFSTNFRKFKMEVEEEEWKERGYQCLNRTKESIP 309 Query: 685 QDFARNRQIHNCWLI 699 DF R+ +IH + I Sbjct: 310 PDF-RDEKIHQLFCI 323 >UniRef50_C2D7E0 N6-adenine-specific DNA methytransferase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D7E0_9ACTN Length = 823 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 124/366 (33%), Positives = 182/366 (49%), Gaps = 55/366 (15%) Query: 391 VAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYA-------------- 436 A + R +K LK+ WA++E + CYR+YDADLP++ ++D + Sbjct: 457 GAAQFAARFKKTLKQRGSWAKREDVSCYRVYDADLPDFACSIDMFNAYQPRTTKTATQDG 516 Query: 437 ---DWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQ- 492 W+ + EY PK ID KA+ RL+D + +L P + + TR + KG +QY Sbjct: 517 SAQRWLNISEYKAPKVIDPVKAKLRLYDTLHIASLILQTKPEDVFVHTRMQAKGGSQYHM 576 Query: 493 ----------------------------KLGEKGE-FLEVTEYNAHLWVNLTDYLDTGLF 523 + E + E VN T D G+F Sbjct: 577 PQTSNIRKTAHTRDASTTALRNASASPLRKSSMPEGSHLIEEGGLIFEVNFTARHDCGIF 636 Query: 524 LDHRIARRMLGQMSK----GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAER 579 LD R R + +M+K K FLNLF+YT ++T +A GGA TTTVDMS L+WA+R Sbjct: 637 LDFREVRNRVREMAKAMKGSKRFLNLFAYTATSTCYAADGGANYTTTVDMSAPTLQWAQR 696 Query: 580 NLRLNGLTGRAHRLIQADCLAW---LREANEQFDLIFIDPPTFSNSKRMED-AFDVQRDH 635 N+ NG G H I+AD L W +R + ++DLI D PTFSNS +M +DV RDH Sbjct: 697 NMERNGFKGNQHEYIRADVLTWIQDMRHSKNRWDLILCDVPTFSNSNKMHGKTWDVARDH 756 Query: 636 LALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHN 695 + L+ L RLL G +F N + F ++ + L K G+ +IT T+ DFAR + +H+ Sbjct: 757 VELIITLSRLLTRDGKALFCCNLKHFTLNKEALGKAGVVIHDITADTIPFDFARTQNVHH 816 Query: 696 CWLITA 701 +++T Sbjct: 817 AYIVTR 822 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 93/336 (27%), Positives = 150/336 (44%), Gaps = 14/336 (4%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 FAS G E+LL EL ++ V+ + +QG V F + Y +++RLASRI+ + Sbjct: 11 EFFASCPLGFEQLLSRELRSIAPVKTRPLQGRVQFFSTLKDAYTICLYTRLASRIVYVIK 70 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 LY I W E + G T A+ G N+ + NS + A KVKDA+ DA + Sbjct: 71 HIDATDAQTLYQQAAEIPWWEHIDRGTTCAIDAHGTNENLSNSIFSAQKVKDALCDACIK 130 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRD----RAGIAPIKETLA 178 RP++D PD+ +++ + K A++ +DLSG+ L RG+ + +A ++ A Sbjct: 131 TQGWRPSIDTHHPDVMISLRIAKNRATLGIDLSGEPLFKRGWEAQKSTQHHLAFLRPDYA 190 Query: 179 AAIVMRSGW-----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDE 233 AA++ +S W L+ SGTL IEA A A G +R WGF W H Sbjct: 191 AALLSQSSWYSCVRHEHATLVCAYPQSGTLCIEAVEQALHLACGRNRIHWGFLKWKGHQP 250 Query: 234 AIWQEVKAEAQTRARKGLAEYSSHFYGSD---SDARVIQRARTNARLAGI-GELITFEVK 289 IW+ + +++ + + + D + + IQ R A + + FE Sbjct: 251 DIWENIIEQSK-KDEQRYQNHRCTLVLYDDTATQRKSIQTIRFMLSRAHVSASRVNFETV 309 Query: 290 DVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIAL 325 D + K G ++N + S + A Sbjct: 310 DFDEFIQRYTKFSQGQSIANNSNAPHVASNASATAF 345 >UniRef50_C7HSK3 Methylase n=3 Tax=Anaerococcus RepID=C7HSK3_9FIRM Length = 376 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 105/386 (27%), Positives = 178/386 (46%), Gaps = 10/386 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M + +T+ G+E L+K +LE +V+ G + G+ + + R A RI L Sbjct: 1 MEKIIITTSFGMESLIKRQLEEENYKNFEVLNGKIILNGNLDDIGYLNLNLREADRIFLE 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + + +L+ ++ I+W + F V+ + + + AI+D+ Sbjct: 61 IEYFTAKTFEELFENIKKIDWFDYLKIDDNFIVNARTYKSKLFSIPSIQSISEKAIIDSL 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RK + ++V + + K+ S+ LD SGDGLH RGYR + API+E LAA Sbjct: 121 KRKY-KISTFKKSGSRVQVEIMIEKDKVSVCLDTSGDGLHKRGYRQGSVKAPIRENLAAG 179 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +V S ++ L D CGSGT+LIEAA + APGL R + F+ + +D+ ++++K Sbjct: 180 LVDLSFYKDDRFLFDGFCGSGTILIEAARKERNIAPGLDRD-FDFTSFKFYDKKRFEKIK 238 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 EA + + GSD + I+ A+ NA AG+ E ITF KD + K Sbjct: 239 KEAYEKID---YRKKINILGSDISKKAIELAKNNALNAGVYEDITFLNKDFKDINL---K 292 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 +G +SNPPYGERL + ++ W++ + S+ ++ ++ + Sbjct: 293 NNFGIFISNPPYGERLSRFDKA-KISKMINEKF-ENLNTWSMFIISSDENIDKNIKRKLS 350 Query: 361 KQYKAKNGPLDCVQKNYHVAESTPDS 386 K+ K NG + + D Sbjct: 351 KKRKLYNGGQKVDLYQFFGKKPKKDR 376 >UniRef50_Q04TW7 N6-adenine-specific DNA methylase n=4 Tax=Leptospira RepID=Q04TW7_LEPBJ Length = 414 Score = 314 bits (806), Expect = 6e-84, Method: Composition-based stats. Identities = 110/375 (29%), Positives = 177/375 (47%), Gaps = 15/375 (4%) Query: 6 ASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECK 65 AS GL LLK E+ G +GGV F+G + + + + ++S I + L K Sbjct: 52 ASCPDGLSGLLKEEILEAGLKIISENRGGVFFQGSVSALKEFALSTGISSGISISLKYWK 111 Query: 66 VYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNL 125 V S DLY + ++F P +F + + D++++S+Y K+KDAI D F K Sbjct: 112 VESPEDLYNQAVQFPFEKIFGPEYSFRIDST-TKDSLKDSRYATYKLKDAIFDRFRSKGK 170 Query: 126 PRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRS 185 P V RD PD+ + H + A ++L L+ L RG+ G AP++E LA+A+V S Sbjct: 171 EPPKVSRDEPDLLFYLRSHSDHAKLSLGLNTRPLQQRGHGRSGGPAPMREILASALVRYS 230 Query: 186 GWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQT 245 GW + L DP CGSGT+++EAA+ + G+ + + Sbjct: 231 GWNTRSVLYDPFCGSGTIVVEAALKLL------------YGGYTNYRSLSSSLSFKKLFG 278 Query: 246 RARKGLAEY-SSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYG 304 + Y + SD + ++ AR NA+ AG+ LITF D ++ K G Sbjct: 279 EPILNVKNYSEMKIFASDKNETILNLARQNAKNAGVDHLITFFESDAT-ISENEKKISDG 337 Query: 305 TVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYK 364 +++NPPYG R+ ++ ++ G+ +K+ F G L+L LL L+L+ DK+ Sbjct: 338 FIVTNPPYGVRIGTKEEAKEIYVAWGKKLKDHFTGNILALACGDTSLLGFLKLKKDKEQS 397 Query: 365 AKNGPLDCVQKNYHV 379 G L Y + Sbjct: 398 LTIGKLKGKLVAYTL 412 >UniRef50_A8ZX82 Putative uncharacterized protein n=2 Tax=Desulfobacteraceae RepID=A8ZX82_DESOH Length = 325 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 123/317 (38%), Positives = 178/317 (56%), Gaps = 12/317 (3%) Query: 389 AMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPK 448 A NR +K + +K ++ IE +R+YD D+PE VD YA +VV EY + Sbjct: 13 RHQAHMLANRAKKQYRHLKKRFARQNIEVFRIYDWDIPEIRAVVDWYAGHLVVGEYTRKQ 72 Query: 449 TIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQK-GKNQYQKLGEKGEFLEVTEYN 507 + L + AA L + P K+ LKTR G+ +Y++L + ++E + Sbjct: 73 STP-----DWLPMMGAAVAEALEVPPAKVHLKTRRTGTQGQKRYERLARTERKIVMSERD 127 Query: 508 AHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTV 567 +VNL DY+DTGLF DHR RRM+ +M+ GKDFLNLF Y+G+ T +A GGARSTT+V Sbjct: 128 FKFYVNLDDYVDTGLFSDHRDTRRMVREMADGKDFLNLFCYSGTFTCYAARGGARSTTSV 187 Query: 568 DMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA---NEQFDLIFIDPPTFSNSKR 624 D SRT + WA N+ LN + + H L+QA +L +A +FDL +DPP+F+ S+ Sbjct: 188 DRSRTAIRWARENMALNSIPSKGHTLVQAHVFDFLEKAAADARRFDLAIVDPPSFATSRD 247 Query: 625 MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLS 684 D+ +DH L++ L++ GGTI+FS N + F ++ L G QEIT T Sbjct: 248 GAHNMDIVKDHPRLLEMTVALMKPGGTILFSTNHQAFAPRMERLGVAG--IQEITSATTP 305 Query: 685 QDFA-RNRQIHNCWLIT 700 +D+ R IH CW IT Sbjct: 306 EDYRNRKTPIHRCWKIT 322 >UniRef50_A3VSE9 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSE9_9PROT Length = 431 Score = 311 bits (797), Expect = 7e-83, Method: Composition-based stats. Identities = 109/357 (30%), Positives = 182/357 (50%), Gaps = 6/357 (1%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +F ++ G E++L+ E +LG + V GGV F G V+++ + S +ASR+++ L Sbjct: 54 EIFLASVPGGEDILRQEALSLGFAHPRAVPGGVRFTGGWSHVWRANLASAVASRVLVRLA 113 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDA--F 120 + + L + A +E+ +P V I +S A ++ +A+ D Sbjct: 114 QFEAPDLKRLAHQLAAFPLSEVRSPLGPVRVEAQCAKSKIFHSGAAAQRLIEAL-DQHGV 172 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 P + P R+ + L + A+++LD +G LH RG + G AP++ETLA+ Sbjct: 173 EAVEGGEPQSPDEVPVPRLMLRLDHDRATLSLDTTGTPLHRRGLKRDVGRAPMRETLASH 232 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 + ++ WQP LLDP CGSGT L+EAA AT + G R R+ F G ++EV Sbjct: 233 FLHQAAWQPEEALLDPFCGSGTFLLEAAGRATGKLAGRGR-RFAFEGLQSFAPDSFEEV- 290 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 A+A + +GSD D I A+ NA A + + + FEV+ ++ + P P Sbjct: 291 AKATAERLAPQKTPALALWGSDLDPTTIAAAKANAARAALADQLHFEVRGISDVAPP-PG 349 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 G +L+NPPYGERL AL L++ G++++ +FGGW + + ++ L + +L Sbjct: 350 LAAGLILTNPPYGERLGDPQALRHLYATFGKVLRERFGGWRVGVITSDERLAAATRL 406 >UniRef50_A8F4G2 Putative RNA methylase n=1 Tax=Thermotoga lettingae TMO RepID=A8F4G2_THELT Length = 355 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 93/370 (25%), Positives = 162/370 (43%), Gaps = 25/370 (6%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 L + GLE+ EL+ LG G VHF G + + ++ + A R+M+ + Sbjct: 2 ELVVLCSAGLEKAPCIELKKLGFKIKTTTSGHVHFDGHLIDIPKLNLYLKSADRVMINVT 61 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSG-LNDTIRNSQYGAMKVKDAIVDAFT 121 + + +L+ G + NW E+ + T V N + A VK AI Sbjct: 62 DFPSETFDELFEGTFSANWNELVHKRGTIVVEKVKITNSKLSAKGAVASIVKKAIYSKIK 121 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSG-DGLHLRGYRDRAGIAPIKETLAAA 180 N P D + +++ S+ LD +G + L RGYR + AP++ET+AAA Sbjct: 122 SDNQP------DGIIYPMYIYIKNNFVSLMLDTTGKNSLSKRGYRMKTSSAPLRETIAAA 175 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +++ SGW PL+DP CGSGT+ IEAA +A ++ + F W + + + Sbjct: 176 LILISGWDQEVPLIDPFCGSGTIAIEAARIALQMQN--NKRSFSFENWPLF-KDLKPSIV 232 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 + + + G D + ++Q A NA AG+ + + F D +L K Sbjct: 233 NQHECKRTVA--------IGYDKNPDILQVANENAIRAGVKKYVRFHCSDFEKLPIFHEK 284 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 +++NPP+G R+ A + + L ++ F L L + DL + + Sbjct: 285 LH---IVTNPPFGLRMREGNA--SFYRKL-SKLRKIFPDARLCLITPREDLQKMISIELQ 338 Query: 361 KQYKAKNGPL 370 ++++ +N L Sbjct: 339 RKFRFQNSGL 348 >UniRef50_UPI0001621339 predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=UPI0001621339 Length = 698 Score = 297 bits (762), Expect = 8e-79, Method: Composition-based stats. Identities = 107/419 (25%), Positives = 177/419 (42%), Gaps = 59/419 (14%) Query: 1 MNSLFASTARGLEELLKTELEN--LGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIM 58 + S +A+ +GLE++L EL + + A + + GGV F+G Y + +W R R++ Sbjct: 90 LQSFYATCEKGLEQILAAELSSPLINASQVETDSGGVFFRGTQSTGYNANLWLRTGDRVL 149 Query: 59 LPLGECKVYS----DLDLYLGVQ-AINWTEMFNPGAT----------------------F 91 L C + LY V+ A +W + + F Sbjct: 150 CELARCLLPQGKSRFDLLYEFVREAADWPLLLVDDSAPLARTLQSETAERLPNRYKFKKF 209 Query: 92 AVHFSGLN-DTIRNSQYGAMKVKDAIVDAFTRKNL---PRPNVDRDAPDIRVNVWLHKET 147 V N + ++ Y + V +AI DA + P P D + + + ++++T Sbjct: 210 IVQIRLSNWKSTKDQNYVSASVSNAIWDALRDSCVGQWPAPAEREDLTAVPLFLDVNEDT 269 Query: 148 ASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQ---------------PGTP 192 A + D+SG LH RGYRD E LAAAI+ +GW Sbjct: 270 AFLYRDMSGVSLHRRGYRDVIDKTKPNEGLAAAILTLAGWNHNVHGFGAANKNDSGKDRV 329 Query: 193 LLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLA 252 LLDP CG+GT+LIEAA++A + APGL R W F W +D W E + A + + L Sbjct: 330 LLDPFCGTGTILIEAALMAYEIAPGLFRPHWPFQTWHDYDPRAWTECRDAAASV--QALP 387 Query: 253 EYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPP- 311 + G+D + I R + AR AG+ L+ + P+ V++NP Sbjct: 388 VSGARLIGNDMNDGAITRCKRAARAAGVLHLLELSSETSRHYKPPVIPS---LVVTNPSC 444 Query: 312 -----YGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKA 365 Y + L+ L G+++K+Q G ++ + S + L + + D ++ Sbjct: 445 SAPLTYSSLRGEDERLLTLWLGFGQLLKSQCRGADVYVLSENDWLAHAMHMVPDSKWDL 503 >UniRef50_Q57880 Putative RNA methyltransferase MJ0438 n=5 Tax=Methanocaldococcus RepID=Y438_METJA Length = 381 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 92/358 (25%), Positives = 162/358 (45%), Gaps = 15/358 (4%) Query: 3 SLFASTARGLEELLKTELENLG--AVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + + + GLE++ K E+E+ G E + +G + F GD +L+ + SR R+ + Sbjct: 2 DYYVTLSPGLEKISKNEIESFGGKIKEIRENKGRIFFSGDLKLIPKINYLSRTIERMNIL 61 Query: 61 LGECKVYS--DLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVD 118 L ++ + D+Y V I+WTE +FA+ + S +A++ Sbjct: 62 LHREEIPNIALDDIYKRVYNIDWTEWIKENQSFAIRPLRAGEHNFTSIDIGRVAGEAVIK 121 Query: 119 AFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGD-GLHLRGYRDRAGIAPIKETL 177 ++ R R V+ D PD+ V V + + + +D +GD L RGYR A + T+ Sbjct: 122 SYQRDKNIRLKVNLDEPDVIVRVEVIFDELIVGIDTTGDIALDKRGYRVFNHPAHLNATI 181 Query: 178 AAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHR-GRWGFSGWAQHDEAIW 236 A+++V S W+ LLDPMCGSGT+ IE A++ + PG R ++GF + Sbjct: 182 ASSLVYLSDWKDDEMLLDPMCGSGTIPIEGALMKRNIPPGKFRENKYGFKFIDIFGYELL 241 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 ++K E + G D + + + A+ NA+ A + + I F D +L Sbjct: 242 DKIKKEIVE------NKNIYKIIGLDKNQKYLDGAKDNAKNAEVLDTIEFICGDATKLHE 295 Query: 297 PLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGG-WNLSLFSASPDLLS 353 +++NPPYG R+ S+ ++ L+ K G L + +A + Sbjct: 296 KF--NESDVIIANPPYGIRIGSKRSVKKLYDEFLSSAKEIMHGSSRLIVITAEDKMFK 351 Score = 45.2 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 44/115 (38%), Gaps = 7/115 (6%) Query: 563 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNS 622 +D ++ YL+ A+ N + N I D + NE D+I +PP Sbjct: 256 KIIGLDKNQKYLDGAKDNAK-NAEVLDTIEFICGDATKLHEKFNES-DVIIANPPY---G 310 Query: 623 KRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQE 677 R+ V++ + + K ++ ++ +M D +AK + +E Sbjct: 311 IRIGSKRSVKKLYDEFLSSAKEIMHGSSRLIVIT--AEDKMFKDAIAKNNFEVKE 363 >UniRef50_B7IFP0 Methyltransferase n=1 Tax=Thermosipho africanus TCF52B RepID=B7IFP0_THEAB Length = 344 Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats. Identities = 97/376 (25%), Positives = 161/376 (42%), Gaps = 35/376 (9%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 L + GLE EL+NLG G ++ +GD + + + ++ R A R+ + L + Sbjct: 3 LMITCTAGLEGATALELKNLGYKIVDSQSGRIYIEGDLKDIPRLNLFLRTAERVYIVLVQ 62 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 +V + +LY + ++NW E + G S N + AI RK Sbjct: 63 DRVETFDELYNVIYSVNWEEFVD-GKVLISDVSVRNSKLSAKGAIVSVCYAAINKKILRK 121 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSG-DGLHLRGYRDRAGIAPIKETLAAAIV 182 + + + + LD +G D L RGYR + AP++ET+AAA+V Sbjct: 122 T---------NNIYPIRLIIKNNILQVLLDTTGKDALSKRGYRLKTSKAPLRETIAAALV 172 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 + S W + L+DP CGSGT+LIEAA+ + P R + W+ + W E Sbjct: 173 LLSRWDKKSSLIDPFCGSGTILIEAALYKENVPPSFLR-YFVSEKWSIL-KDYWPE---- 226 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 RK + +G D D V++ A+ N + A I +I +E D L K Sbjct: 227 -----RKKYKVNVDNLFGFDIDKEVLKVAQENEKRANINGII-YENIDFNNLK----KFE 276 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 V++NPPYGERL ++ L + F + + S + +Q +A K+ Sbjct: 277 NCWVVTNPPYGERLKNDINFSKLW--------DIFVDSKIYILSPDSNFERLVQKKARKK 328 Query: 363 YKAKNGPLDCVQKNYH 378 + +N + ++ Sbjct: 329 IRFQNSGIWVWLYMFY 344 >UniRef50_A7HLT5 Putative RNA methylase n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HLT5_FERNB Length = 377 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 100/382 (26%), Positives = 157/382 (41%), Gaps = 32/382 (8%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 + A GLE L EL G + F D + + A RI + + Sbjct: 22 TFVAFCTSGLEGALANELRKNNYKITYSSSGRIFFTADLKDTPSINTKLKAADRIAILIS 81 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHF-SGLNDTIRNSQYGAMKVKDAIVDAFT 121 + + +LY + + P A + N + + A VK AI+D Sbjct: 82 QFFAETFDELYDNILKSGVKDYVEPNAKITIEKIKVTNSKLSATGAIASVVKKAILDNIK 141 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGD-GLHLRGYRDRAGIAPIKETLAAA 180 + P+ + L +T + LD +G+ GLH RGYR +A API+ET+A Sbjct: 142 -------GSNETGPEYPFIIILKDDTVYLLLDTTGNIGLHKRGYRIKASKAPIRETIATG 194 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +++ S W PL DP CGSGT+ IEAA+L P + R ++ W + W+ +K Sbjct: 195 VIILSHWNSEIPLFDPFCGSGTIPIEAAIL---EVPNISR-KYVSENWKILKKE-WEIIK 249 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLA----GIGELITFEVKDVAQLTN 296 K + + Y SD D +VI A+ N A I I F+ D +L Sbjct: 250 KNNG----KNIKTENKKIYASDVDCQVINIAKENYNRAKKLFNINTNIDFKCTDFRKL-- 303 Query: 297 PLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQ 356 P+ P V+SN PYG+R+ L + +I++ +F L S D Sbjct: 304 PVFNEP-AYVISNLPYGQRI-EVDILKEI-----KILREKFPKGKFYLIHPSEDFEKYFG 356 Query: 357 LRADKQYKAKNGPLDCVQKNYH 378 +A K++K +N + Y+ Sbjct: 357 -KATKKFKFQNSGIWTYLYMYY 377 >UniRef50_A2SC20 N6-adenine-specific DNA methylase-like protein n=2 Tax=Burkholderiales RepID=A2SC20_METPP Length = 779 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 110/322 (34%), Positives = 163/322 (50%), Gaps = 8/322 (2%) Query: 2 NSLFASTARGLEELLKTELENL-GAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 +SLF A G+E LL E+ L Q +GGV +G R + SRLA R++ Sbjct: 27 SSLFLPCAAGVEALLADEVARLLPGAAAQTQRGGVMVRGGPREAMALNLGSRLAQRVLWQ 86 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + + S+ DLY ++ W + P T V + +++ + A+++KD + DA Sbjct: 87 VADAPYRSEDDLYALARSPRWPDWITPTQTLKVDVTAQRAPLKSLNFAALRIKDGVCDAM 146 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RP+VD PD+ + + L E A++ +D SG+ L RG+R+ G AP+KETLAAA Sbjct: 147 RDALGARPSVDTRRPDLPLLLHLAPEHATLYVDTSGEALFKRGWREDQGEAPLKETLAAA 206 Query: 181 IVMRSGWQP---GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 ++ +GWQ PLLDP+CGSGT+ IEAA +A APG R R+ F +A Q Sbjct: 207 MLAAAGWQGREADGPLLDPVCGSGTIAIEAAQIACGIAPGSLR-RFAFERLGPFRDAGTQ 265 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 E + AR + + + D R+ A NA AG+ I + D Q P Sbjct: 266 RAWRELREAARAAVHASAVPIFAGDVAFRMTDFAARNAARAGVAAAIELKTVDALQRAAP 325 Query: 298 LPKGPYGTVLSNPPYGERLDSE 319 GT++ NPPYGER+D + Sbjct: 326 ---AERGTLMLNPPYGERIDPK 344 >UniRef50_C1E310 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E310_9CHLO Length = 1009 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 128/524 (24%), Positives = 199/524 (37%), Gaps = 131/524 (25%) Query: 1 MNSLFASTARGLEELLKTELEN--LGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIM 58 + +A+ GLE+++ ELE+ +GA + +V GV F+GD R+ Y++ +W R A R++ Sbjct: 479 LGDYYATCHPGLEDVVAKELESELIGASDVRVGASGVSFRGDARVGYRANVWLRCAIRVL 538 Query: 59 LPLGEC----KVYSDLDLYLGVQ-AINWTEMFNPGA--TFAVHFSGLNDT-IRNSQYGAM 110 L V +Y V+ A W E+ TF+V + T + +++ + Sbjct: 539 CELDRGYIDPNVPGGAAIYDFVRDAAPWHEVIPADDGLTFSVESRVRSCTDVTSTRLAST 598 Query: 111 KVKDAIVDAFTRKNLPRP---NVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDR 167 + KDAI DA N RP + D+ + + L ++ A + D+SG+ LH RGYRD Sbjct: 599 RAKDAICDALVDVNGWRPPPPQFGHSSADVPLYLSLFRDEAKLYRDMSGESLHRRGYRDA 658 Query: 168 A-GIAPIKETLAAAIVMRSGWQPG-----------TPLLDPMCGSGTLLIEAAMLATDRA 215 A A + E AA ++ +GW L+DPMCGSGTLLIE AM+A A Sbjct: 659 AIHRAALNEAAAAGVLSLAGWSAACDRARERGLVLPALVDPMCGSGTLLIEGAMMAGRVA 718 Query: 216 PGL-----------------------HRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLA 252 PGL R + F W HD + +EV EA Sbjct: 719 PGLIRVDAAGGFGKGGDGGRDPSPGVQRPAFAFERWPDHDPTLLEEVLEEAAEIGAAARK 778 Query: 253 EY--SSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP------------- 297 + + G+D A + AR A AG+ +I F D A LT+P Sbjct: 779 KMGGAPVIIGNDVHAGALSLARRAAMAAGVDGVIDFVQGDAADLTHPKLTEFTAAALERD 838 Query: 298 --------------------LPKGPYGTVLSNPPYGERLDSE------------------ 319 +G V+SNPP+G R+ + Sbjct: 839 GLQRDVDEPVDLDDLGPTALRAEGGGVLVVSNPPWGMRIGARDDGYDGDDAGDGYGDGNW 898 Query: 320 ------------------------------PALIALHSLLGRIMKNQFGGWNLSLFSASP 349 P + LG + + GG L S Sbjct: 899 DDAASDAGSVRGGDSVRGGESVPSAGTLRAPDVEEAWQSLGAFFRRECGGATAHLLSGDA 958 Query: 350 DLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAE 393 + L++RA ++ G +DC Y + + +A+ Sbjct: 959 NATRPLRMRARRKRVLGIGGVDCRLLEYRILPPRRRASLEELAD 1002 >UniRef50_A6LJF6 Putative RNA methylase n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LJF6_THEM4 Length = 340 Score = 282 bits (721), Expect = 4e-74, Method: Composition-based stats. Identities = 90/381 (23%), Positives = 156/381 (40%), Gaps = 47/381 (12%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 ++ + GLE E++N+G + V G ++ KGD + + + R A R+ + L Sbjct: 2 TIVLTCTSGLEAATALEVKNMGYKVLESVSGKIYIKGDLKDIPLLNIHLRSAERVFILLK 61 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + V + + Y + I+W + + G + S N + AI + Sbjct: 62 KTVVKTFDEFYKAIYEIDWEDFVH-GKVYISDVSVRNSKLSAKGAIISVAYAAI----RK 116 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGD-GLHLRGYRDRAGIAPIKETLAAAI 181 K NV V + L + + LD +G+ L RGYR + AP++ET+AA++ Sbjct: 117 KVKSESNV-----KFPVRIILKNDVLYVLLDTTGEKALSKRGYRLKTSKAPLRETIAASL 171 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRG----RWGFSGWAQHDEAIWQ 237 ++ S W+ +DP CGSGT+ IEAA++ ++ PG+ R W F W + + Sbjct: 172 ILLSRWK-NATFIDPFCGSGTIPIEAALIKSNTPPGIFRSFVSENWNFLNWPDRGKRLIN 230 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 YG D D +I+ A+ NA+ GI LI FE + Sbjct: 231 -----------------VDEIYGFDLDEEIIKIAKENAKRIGIKGLI-FEKRLFGTY--- 269 Query: 298 LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 +++NPPYGERL + +K F + + + Sbjct: 270 --NMNNVWIVTNPPYGERLSYNID-------FSKFLK-NFEDSKFYILFPNRNFEKMFGK 319 Query: 358 RADKQYKAKNGPLDCVQKNYH 378 +A K+ + +N + Y+ Sbjct: 320 KATKKIRFQNSGIWVWFYMYY 340 >UniRef50_D2EHY6 N6-adenine-specific DNA methylase (Fragment) n=6 Tax=Bacteria RepID=D2EHY6_PEDAC Length = 228 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 80/227 (35%), Positives = 116/227 (51%), Gaps = 2/227 (0%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 L A+ A GLE L K EL++LG + Q G V F+G V ++ +W R A RI + + Sbjct: 4 YKLLATMASGLESLTKNELKDLGY-DVQTENGRVRFEGTFEDVIRTNLWLRTADRIKIIV 62 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 GE K + +L+ V+A+ W E+ F V+ + + K AIV+ Sbjct: 63 GEFKAVTFDELFEQVKALPWDELIPINGAFPVNGKSKKSQLHSVPDVQAITKKAIVEKLR 122 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 R + + V + K+ I LD +GD L RGYR G AP+KET+AAA+ Sbjct: 123 EVYHWRNQLPETGAKYGLEVSIDKDHVLITLDTTGDSLFKRGYRLYKGSAPLKETMAAAL 182 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGW 228 VM + W PL+DP CGSGT+ IEAA++ + APG +R + W Sbjct: 183 VMLTNWHADKPLVDPFCGSGTIPIEAALIGQNIAPGFNRS-FACESW 228 >UniRef50_B5Y5B8 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y5B8_PHATR Length = 547 Score = 277 bits (710), Expect = 7e-73, Method: Composition-based stats. Identities = 116/430 (26%), Positives = 180/430 (41%), Gaps = 50/430 (11%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVV-QGGVHFKGDTRLVYQSLMWSRLASRIML 59 + S A+ GL + L EL LG + + V F +T+ ++L+W+R + ++M Sbjct: 58 IGSYIATCIPGLSDALSDELRTLGCQDVERSASSAVRFNANTQTALKALLWTRTSHKVME 117 Query: 60 PLGECK--VYSDLDLYLGVQ-AINWTEMFNPG---------ATFAVHFSGLNDTIRNSQY 107 L E + S DL+ + A+ E+ G + S + I +S Y Sbjct: 118 FLCESPPTLKSREDLHRFILDAVPVKELLGDGRGGLLTLSVGVILNNPSKIPKDINHSHY 177 Query: 108 GAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKE----TASIALDLSGDGLHLRG 163 A+ VK+A+ DA RPNVD D PD+ + L S+ L LH RG Sbjct: 178 SALTVKNALCDAVRELRDDRPNVDLDDPDVPLTAVLLGTDSGARVSLYRQLHNGSLHKRG 237 Query: 164 YRDRA-GIAPIKETLAAAIVMRSGWQPGT----------PLLDPMCGSGTLLIEAAMLAT 212 YR A A +KE+LAA +++ +GW LLDPM GSG+LL+E AM+A Sbjct: 238 YRSGAIHKAAMKESLAAGLLLTAGWDQKCRDARREDDAVVLLDPMAGSGSLLLEGAMMAV 297 Query: 213 DRAPGLHRGRWGF--------SGWAQHDEAI-----WQEVKAEAQTRARKGLAEYS---- 255 D APGL R + G W HD + W+ + +A +RA+ GL Sbjct: 298 DLAPGLMRIKCGLPGHSMPPVVRWK-HDGDMRVVDEWKALLLDATSRAKSGLRWMQSTDT 356 Query: 256 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN-PLPKGPYGTVLSNPPYGE 314 G+D + AG+ L+ E D + P +G V+SNPP+G Sbjct: 357 VEILGNDIHDGALNLFENALDAAGLRRLVQLEEGDCSDWKPKPKREGTPFIVVSNPPWGV 416 Query: 315 RLDSEPALIALHSLLGRIMKNQFG-GWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCV 373 RL + + + ++ G + S + + L LR + K G D Sbjct: 417 RLTED--MSESWESMRIFLRECCPSGTEAWVLSGNAEATKHLGLRRSQSLALKTGDQDLR 474 Query: 374 QKNYHVAEST 383 Y + + + Sbjct: 475 WLQYILRDRS 484 >UniRef50_A6GJE9 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJE9_9DELT Length = 399 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 110/393 (27%), Positives = 176/393 (44%), Gaps = 28/393 (7%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 +F + A GLEELL E+E LG E + V GGV GD VY+ + L R+++ +GE Sbjct: 1 MFVAAAPGLEELLLEEVEALGIEEARAVPGGVSCFGDFADVYRLNLGCGLGLRVLIRVGE 60 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 V L + I W + G V + ++ A +V+ I + Sbjct: 61 FFVRDFRKLERVARDIEWERWLDWGMGVRVRAHAKRSRLYHTGGIAERVERGIFARSRGE 120 Query: 124 NLPRPNVDRDAPD-----------IRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAP 172 + + + + P + V V + ++ +I++D +G L RG+R AP Sbjct: 121 AVFCVDGEAEGPGGGDHGPSGFEPVLVQVRIIRDRCTISIDTTGSLLPKRGWRPEGAKAP 180 Query: 173 IKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHD 232 ++E LA A++ S W+PG L+DPM GSGTLLIEAA + P H R+GF G +D Sbjct: 181 LREDLACALLKVSSWRPGVALVDPMVGSGTLLIEAATRSRG-WPANHARRFGFVGAPYYD 239 Query: 233 EAIWQEVKAEAQTRAR-KGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDV 291 + EA+ RA G + F G D DA I+ AR NA A +G+ + + Sbjct: 240 SRRF-----EAERRALSAGEDPVAGAFVGFDRDAGAIEIARRNAARAQLGDALELAQGSI 294 Query: 292 AQLTNPLPKGPYG-----TVLSNPPYGERLDSEPALIALHSLLGRI---MKNQFGG--WN 341 L G +++NPP+G R+ L L++ LG+ + + G Sbjct: 295 GSLDGSAVATAVGGAESVLIVANPPWGRRVGDPSRLRNLYASLGQFAARLNDALDGRELG 354 Query: 342 LSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQ 374 L++ + P L L +++ K G ++ Sbjct: 355 LAMVTPEPKLAHATGLALERRATVKMGSVEVGL 387 >UniRef50_O28105 Putative RNA methyltransferase AF_2178 n=4 Tax=Archaea RepID=Y2178_ARCFU Length = 392 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 153/350 (43%), Gaps = 28/350 (8%) Query: 3 SLFASTARGLEELLKTELENLGA--VECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 +A+ GLE++ E+E+ G E + +G + F G+ + +SR R+ + Sbjct: 32 RFYATLTPGLEDVAAKEVESFGCKVEEIRERRGRIFFSGEKSAIPLLNHFSRTLERLNVL 91 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L C+V D+Y V+ ++++ F G +FA+ + + S A A++D+F Sbjct: 92 LLRCEVEGLDDIYAAVKGLDFS--FVKGKSFAIRSLRVGEHDFTSMDIARVAGQAVIDSF 149 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGD-GLHLRGYRDRAGIAPIKETLAA 179 R V+ + PD+ + V L + +D +GD +H R +R A + +A Sbjct: 150 MESYGERLKVNLNQPDVIIRVELVDSELFVGVDTTGDDAMHKRWWRVYNHPAHLNAAIAC 209 Query: 180 AIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 ++ + W+ L+DPMCGSGT+ IEAA++ + + + + W+ Sbjct: 210 GMLRIADWKVDESLIDPMCGSGTIPIEAALMVRNVP---NLRDFAYKKL-----CEWELA 261 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 + R YG + + + A NA AG+ + I F D ++T Sbjct: 262 FEPNEVR---------LKLYGMEKFRKHLVGAIRNAVNAGVADTIEFRQGDATEMT---- 308 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQF-GGWNLSLFSAS 348 G Y +++NPPYG R+ + A+ L+ R K L + +A Sbjct: 309 -GEYDVIITNPPYGLRIHRKGAIERLYHSFARAAKRCMNQNSRLVIITAE 357 >UniRef50_A0KKF0 Ribosomal RNA large subunit methyltransferase I n=34 Tax=Bacteria RepID=RLMI_AERHH Length = 397 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 77/316 (24%), Positives = 133/316 (42%), Gaps = 18/316 (5%) Query: 385 DSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQE 443 D + + + + RL+ + + +++G+ YRL A+ + +DRYAD++V Q Sbjct: 69 DKEETVDLDFFIRRLKYAQESRDGLIKRQGLTGYRLCAAESDGLPGLTIDRYADFLVCQI 128 Query: 444 YAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKG-EFLE 502 + A R + + I V ++ + GE E + Sbjct: 129 LSA----GAEFQRDLITQALRTLYPECSIYERSDVAVRKKEGLKERTGVIYGETPTEPVV 184 Query: 503 VTEYN-AHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGA 561 + E + V++ + TG +LD R R+ + ++GK LN F YTG V+A GGA Sbjct: 185 IEENGGVKILVDIRNGHKTGFYLDQRDNRQAAAKYTEGKRVLNCFCYTGGFGVYALKGGA 244 Query: 562 RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL---REANEQFDLIFIDPPT 618 + VD+S+ L+ A +N LNGL + ++ D L RE ++FD+I +DPP Sbjct: 245 KEVVNVDLSQNALDIARQNAELNGLDTSNTQFVRHDVFKLLREYREKGDKFDVIVLDPPK 304 Query: 619 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL------DGLAKLG 672 F+ SK R + + +LL GG ++ + L D G Sbjct: 305 FAESKA--QLLGACRGYKDINMLAFQLLAPGGVLLTYSCSGLMEQSLFQKIVADAALDAG 362 Query: 673 LKAQEITQKTLSQDFA 688 AQ + + + D Sbjct: 363 RDAQILELLSQASDHP 378 >UniRef50_UPI000169A05C hypothetical protein Epers_10695 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI000169A05C Length = 302 Score = 268 bits (685), Expect = 6e-70, Method: Composition-based stats. Identities = 113/277 (40%), Positives = 157/277 (56%), Gaps = 12/277 (4%) Query: 379 VAESTPDSKPAMVAEDYTNRLRKNLKKFEKWAR----QEGIECYRLYDADLPEYNVAVDR 434 + +P + +TNRLRKN + + KWAR + P A+D Sbjct: 16 PRDGGQRHQPVNNFDAFTNRLRKNQRHWRKWARPGAASAATASMIVTSRSFP---WAIDW 72 Query: 435 YADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKL 494 Y + Q +A + ++ +R I A SV+ + ++L KTR RQ+G QYQK Sbjct: 73 YEGHLHAQLFARKGIEEPSESEER--AIADALSSVMEVPADRLAFKTRRRQRGLTQYQKT 130 Query: 495 GEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATV 554 G +G + V E V+L YLDTGLFLDHRI R M+ + + GK FLNLF+YTGS +V Sbjct: 131 GRQGRLMIVQEAGLRFEVDLHSYLDTGLFLDHRITRSMVREQAAGKRFLNLFAYTGSFSV 190 Query: 555 HAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL---REANEQFDL 611 +A GGA ++ TVD+S TY EW++RNL+LNG HRL +AD +L E+FDL Sbjct: 191 YAAAGGAEASLTVDLSNTYQEWSQRNLQLNGFGYPRHRLQRADVFEFLIQAERKRERFDL 250 Query: 612 IFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRA 648 I +DPP+FSNSKRM++ DVQRDH L++ L + Sbjct: 251 IVLDPPSFSNSKRMQEVLDVQRDHARLIEGCMALAQP 287 >UniRef50_B5IEU1 Putative RNA methylase n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IEU1_9EURY Length = 356 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 93/376 (24%), Positives = 158/376 (42%), Gaps = 22/376 (5%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 ++T GLE++ E+E GA ++ G V ++G+ L+Y+ ++ RI + L Sbjct: 3 FLSTTVHGLEDIAAREIEKFGARILELKTGKVIYEGNEELIYRLNYGAKRIFRIAVILSM 62 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 K+ D VQ + F TFAV + S +A+V K Sbjct: 63 GKIKELEDTRKFVQEAD----FCINTTFAVRTKRRGEHDFTSMDV-----NAVVGEEILK 113 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 P+ V+ D P++ W+ E +D +G+ LH RGYR API LA+ ++ Sbjct: 114 KCPKAKVNLDNPNLTFLCWVDNENFIFTIDTTGESLHRRGYRIYQHPAPINPVLASLMLK 173 Query: 184 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEA 243 +GW G ++DP CGSGT+ IEA +R P R + F DEA+W +K E Sbjct: 174 FAGWN-GEKMVDPFCGSGTIPIEA-YHNYNRVPNKFRT-FNFPKLPFFDEALWNGIKEEM 230 Query: 244 QTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPY 303 R E Y + + + + NA+ AG + D + + P Sbjct: 231 DKSERNKRLE----LYCVEKFKKHVNGCKLNAKNAG--ARFSCLQGDAENMHKFVDYAP- 283 Query: 304 GTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQY 363 +++NPP+G R+ S+ + L+ + ++ F G L+L + ++ + Sbjct: 284 -FIITNPPFGLRIGSKKKIFKLYEEFAKELEEHFSGAILTLIIPYKKFENYFEVLEKRDI 342 Query: 364 KAKNGPLDCVQKNYHV 379 G L + + Sbjct: 343 -MY-GELQTKIYRFKI 356 >UniRef50_B1ICH9 Methyltransferase n=65 Tax=Streptococcaceae RepID=B1ICH9_STRPI Length = 387 Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats. Identities = 84/319 (26%), Positives = 146/319 (45%), Gaps = 20/319 (6%) Query: 384 PDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYN-VAVDRYADWVVVQ 442 K A + RK +K + + + +RL++ + + + VD Y D+ V Sbjct: 63 SKDKVAFNQTFFETLFRKAKEKRNAYYQDDLTTAFRLFNQEGDGFGGLTVDLYGDYAVFS 122 Query: 443 EYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLE 502 Y ++ RQ + + + A K+ K + + Q E +F Sbjct: 123 WYNSY----VYQIRQTISEAFRQVFPEVLGAYEKIRFKGFDYESAHVYGQ---EAPDFFT 175 Query: 503 VTEYNAHLWVNLTDYLDTGLFLDHRIAR-RMLGQMSKGKDFLNLFSYTGSATVHAGLGGA 561 V E V + D L TG+FLD R ++ ++ GK LN+FSYT + +V A +GGA Sbjct: 176 VLENGVLYQVFMNDGLMTGIFLDQHEVRGSLVDGLAMGKSLLNMFSYTAAFSVAAAMGGA 235 Query: 562 RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQ---FDLIFIDPPT 618 TT+VD+++ E ++ + + NGL+ HR I D + + A + +D+I +DPP+ Sbjct: 236 SQTTSVDLAKRSRELSQAHFQANGLSTDEHRFIVMDVFEYFKYAKRKDLTYDVIVLDPPS 295 Query: 619 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN-----KRGFRMDLDGLAKLGL 673 F+ +K+ F V +D+ L+ +L GG I+ S N ++ F +D G Sbjct: 296 FARNKK--QTFSVAKDYHKLISQSLEILNPGGIIIASTNAANVSRQKFTEQIDK-GFAGR 352 Query: 674 KAQEITQKTLSQDFARNRQ 692 Q + + L DFA N++ Sbjct: 353 SYQILNKYGLPADFAYNKK 371 >UniRef50_A8AXZ7 Methyltransferase n=5 Tax=Streptococcus RepID=A8AXZ7_STRGC Length = 387 Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 82/319 (25%), Positives = 147/319 (46%), Gaps = 20/319 (6%) Query: 384 PDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEY-NVAVDRYADWVVVQ 442 K + + + K +K + + E I YRL++ + + + VD+Y D+ + Sbjct: 63 SKQKVDFDRDFFISLFEKAKEKRRFYCQAEDITAYRLFNQEGDGFAGLTVDQYGDYALFS 122 Query: 443 EYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLE 502 Y P ++ + L A K+ K + + + + E E Sbjct: 123 WYNPF----VFSLKEEILQAFQEVFPELMGAYEKIRFKGLDYE---SAHVYGAEAPEVFT 175 Query: 503 VTEYNAHLWVNLTDYLDTGLFLDHRIARR-MLGQMSKGKDFLNLFSYTGSATVHAGLGGA 561 V E V L D L TG+FLD R ++ +++GK LN+FSYT + +V A +GGA Sbjct: 176 VLENGVSYQVFLNDGLMTGIFLDQHEVRASLIDGLARGKSLLNMFSYTAAFSVAAAMGGA 235 Query: 562 RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQ---FDLIFIDPPT 618 TT+VD+++ E +E + + NGLT HR + D + + A +D+I +DPP+ Sbjct: 236 SQTTSVDLAKRSRELSEAHFQANGLTLDNHRFVVMDVFDYFKYAKRHGLSYDVIVLDPPS 295 Query: 619 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR-----GFRMDLDGLAKLGL 673 F+ +K+ F V +D+ L+K+ +L G ++ S N F+ +++ G Sbjct: 296 FARNKK--QTFSVAKDYHKLIKESLEILNPKGVLIASTNASNVTRAKFKKEIEK-GFAGK 352 Query: 674 KAQEITQKTLSQDFARNRQ 692 + I + L DF+ N++ Sbjct: 353 YHRYIKEYGLPADFSYNKK 371 >UniRef50_A8J6H0 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8J6H0_CHLRE Length = 472 Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 97/392 (24%), Positives = 157/392 (40%), Gaps = 46/392 (11%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGD-TRLVYQSLMWSRLASRIMLPL 61 S FA+ GLE+++ EL +LG + + GV F Y + + R A R+M L Sbjct: 61 SFFATCHPGLEQVVANELLSLGFRGVEPGRAGVSFVARRLSDGYAANLHLRAAIRVMALL 120 Query: 62 GECKVYSD--------LDLYLGVQ-AINWTEMFNPGATFAVHFSGLNDT-IRNSQYGAMK 111 E ++ +D LY V A W ++ GA+F+V + T I +Q + Sbjct: 121 AEGELGADPQAGKRGGQALYDMVYEAAPWHDIIPRGASFSVEPRLWSCTDISTTQLVWSR 180 Query: 112 VKDAIVDAFTRKNLPRPNVDRDA--PDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAG 169 VKDA+ D + +P D+ + V +K+ + D+SG+ LH RGYRD Sbjct: 181 VKDAVCDNIRQHRSDKPAPPEKGKVADVPLYVTCYKDHIKVYRDMSGESLHRRGYRDVMH 240 Query: 170 IAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWA 229 A + E AA +++ SGW+ L + G G +L + R L G W F W Sbjct: 241 RAALNEAAAAGVLLMSGWR--QALEEAGDGEGLVLADPM-----REAPLAEGAWPFQHWG 293 Query: 230 QHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVK 289 +D A W E A+ R R + G D + A AR AG+ ++ + Sbjct: 294 DYDSAAWTEQVEAARARVRP---PWRGRLVGIDVHEGALGLAERQARKAGVYNMLELSLA 350 Query: 290 DVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASP 349 D Q + L A L + Q G + S+ S +P Sbjct: 351 DCGQ-----------------------GEDAFLAAAWKSLDGFLYRQCPGASASVISGNP 387 Query: 350 DLLSCLQLRADKQYKAKNGPLDCVQKNYHVAE 381 D L+L+ +++ ++ Y + + Sbjct: 388 DPFKYLKLKPQSKHRLTLSGMEVQVAGYQIRD 419 >UniRef50_B5XY38 Ribosomal RNA large subunit methyltransferase I n=122 Tax=Gammaproteobacteria RepID=RLMI_KLEP3 Length = 400 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 81/315 (25%), Positives = 129/315 (40%), Gaps = 17/315 (5%) Query: 385 DSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQE 443 D A+ + + RL++ A ++G++ YRL + V +DR+ ++ V+Q Sbjct: 73 DRNEAIDSAFFERRLQQAQTWRAWLAERDGLDSYRLIAGESDGLPGVTIDRFGNFFVLQL 132 Query: 444 YAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGE-KGEFLE 502 + A R + + I V ++ Q +GE L Sbjct: 133 LSA----GAEYQRAAIISALQNLFPDCAIYDRSDVAVRKKEGLELAQGPVVGELPPALLP 188 Query: 503 VTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGAR 562 +TE+ L V++ TG +LD R +R + K LN FSYTG V A +GG R Sbjct: 189 ITEHGMKLLVDIQGGHKTGYYLDQRDSRLATRRYVADKRVLNCFSYTGGFAVSALMGGCR 248 Query: 563 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE---ANEQFDLIFIDPPTF 619 T+VD S+ L+ A +N+ LNGL ++ D LR+ E+FD+I +DPP F Sbjct: 249 QVTSVDTSQEALDVARQNVELNGLDLSKAEFVRDDVFKLLRKYRDQGEKFDVIVMDPPKF 308 Query: 620 SNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL------DGLAKLGL 673 +K R + + +LL GG ++ + DL D G Sbjct: 309 VENKS--QLMGACRGYKDINMLAIQLLNPGGVLLTFSCSGLMTTDLFQKIIADAAIDAGR 366 Query: 674 KAQEITQKTLSQDFA 688 Q I Q + D Sbjct: 367 DVQFIEQFRQAADHP 381 >UniRef50_B0N335 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N335_9FIRM Length = 400 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 134/320 (41%), Gaps = 22/320 (6%) Query: 383 TPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVV 441 + D + R++ F K +E + RL + E + VDRY D +V Sbjct: 70 SKDINEIFDRNFFKRRIQFAY-DFRKTVEKENLTNCRLVFGEADELPGLTVDRYNDILVC 128 Query: 442 QEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQ------YQKLG 495 Q + K + +++I+ ++ G + + + + K Y + Sbjct: 129 QI----SSYGLDKIKDMIYEILLEVLTEDGQDVKGIYERNDIKVRAKEGLPLEKGYWRNI 184 Query: 496 EKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVH 555 + E +L V++ + TG FLD + R +L ++ GK L+ FS+TG ++ Sbjct: 185 NLPTTTIINENGINLSVDVENGQKTGYFLDQKANRVLLRNIAYGKKVLDCFSHTGGFALN 244 Query: 556 AGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANE-QFDLIFI 614 A G A+ VD+S+T L+ N +LN L G ++ D +L + + QFD+I + Sbjct: 245 AAYGKAKEVVAVDVSQTALDQGYANAKLNNLQG-CISFVKDDVFDYLDKCKKGQFDIIVL 303 Query: 615 DPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD------LDGL 668 DPP F+ S+R D + + +LL GG ++ + R D + Sbjct: 304 DPPAFTKSRRTVDH--AYNGYKKINMKAMKLLGRGGYLITCSCSRFMETDNFEKMLRESA 361 Query: 669 AKLGLKAQEITQKTLSQDFA 688 + G+ ++++ + D Sbjct: 362 HEAGVTLKQVSVTQQNPDHP 381 >UniRef50_B5F1W3 Ribosomal RNA large subunit methyltransferase I n=98 Tax=Gammaproteobacteria RepID=RLMI_SALA4 Length = 403 Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats. Identities = 80/315 (25%), Positives = 129/315 (40%), Gaps = 17/315 (5%) Query: 385 DSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQE 443 D ++ +T RLR+ + + A+++G++ YRL + V +DR+ ++V+Q Sbjct: 76 DKAESIDIAFFTRRLRQAQQWRDWLAKKDGLDSYRLIAGESDGLPGVTIDRFGHFLVLQL 135 Query: 444 YAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGE-KGEFLE 502 + A R L + I V ++ Q GE L Sbjct: 136 LSA----GAEYQRAALISALQTCYPDCAIYDRSDVAVRKKEGMALTQGPVTGELPPALLP 191 Query: 503 VTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGAR 562 + E+ L V++ TG +LD R +R + + + LN FSYTG V A +GG R Sbjct: 192 IEEHGMKLLVDIQGGHKTGYYLDQRDSRLATRRYVENQRVLNCFSYTGGFAVSALMGGCR 251 Query: 563 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL---REANEQFDLIFIDPPTF 619 +VD S+ L+ A +N+ LN L ++ D L RE E+FD+I +DPP F Sbjct: 252 QVVSVDTSQDALDIARQNVELNQLDLSKAEFVRDDVFKLLRAYREHGEKFDVIIMDPPKF 311 Query: 620 SNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL------DGLAKLGL 673 +K R + + +LL GG ++ + DL D G Sbjct: 312 VENKS--QLMGACRGYKDINMLAIQLLNPGGILLTFSCSGLMTSDLFQKIIADAAIDAGR 369 Query: 674 KAQEITQKTLSQDFA 688 Q I Q + D Sbjct: 370 DVQFIEQFRQAADHP 384 >UniRef50_Q12JE5 Ribosomal RNA large subunit methyltransferase I n=24 Tax=Bacteria RepID=RLMI_SHEDO Length = 397 Score = 257 bits (658), Expect = 8e-67, Method: Composition-based stats. Identities = 80/315 (25%), Positives = 132/315 (41%), Gaps = 17/315 (5%) Query: 385 DSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQE 443 D + A+ A+ + R+++ E R++G+ YRL A+ + +DRYAD +V Q Sbjct: 70 DKEEAIDADFFARRIQRAQAGREDLIREQGLTGYRLIAAESDGLPGITIDRYADVLVCQL 129 Query: 444 YAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGE-FLE 502 A K R L + +A I V ++ Q GE + Sbjct: 130 LNT----GAEKWRDTLVEQLALQFPGCAIYERSDVDSRKKEGLAPVQGLLHGELPAMPII 185 Query: 503 VTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGAR 562 + E + V++ TG +LD R R + + KGK LN F YTG+ ++A GA Sbjct: 186 IEENGIKIAVDVVKGHKTGFYLDQRDNRAIAARFVKGKSVLNCFCYTGTFGLYAAKAGAA 245 Query: 563 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE---ANEQFDLIFIDPPTF 619 S VD+S L+ A N+ +NGL +AD LR+ + FD+I +DPP F Sbjct: 246 SIENVDVSALALQTARDNMAINGLDDSHVNYHEADVFKLLRQYRDEGKTFDVIVLDPPKF 305 Query: 620 SNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL------DGLAKLGL 673 +++K + R + + +LL GG ++ + DL D Sbjct: 306 ADNKSQLNG--ACRGYKDINMIAMQLLNPGGILLTFSCSGLMESDLFQKVVADAALDAKR 363 Query: 674 KAQEITQKTLSQDFA 688 + Q + + + D Sbjct: 364 EVQFVERMHQASDHP 378 >UniRef50_P39587 Putative ribosomal RNA large subunit methyltransferase ywbD n=112 Tax=Bacteria RepID=YWBD_BACSU Length = 396 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 29/323 (8%) Query: 383 TPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYN-VAVDRYADWVVV 441 T + + + ++L K + K + +RL++ + V +D Y ++++ Sbjct: 67 TRNKHEQIDQAFFLSKLTKAAQARAKLFEAQDTTAFRLFNGEGDGVGGVTIDYYDGYLLI 126 Query: 442 QEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQK-----LGE 496 Q Y+ K D++ + + + + + K R G QY + G Sbjct: 127 QWYS--------KGIYTFKDMLISALDEMDLDYKAIYEKKRFDTAG--QYVEDDDFVKGR 176 Query: 497 KGEF-LEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLG-QMSKGKDFLNLFSYTGSATV 554 +GEF + + E V+L + TG+FLD R R+ + + +KGK LN FSYTG+ +V Sbjct: 177 RGEFPIIIQENGIQYAVDLNEGAMTGIFLDQRHVRKAIRDRYAKGKTVLNTFSYTGAFSV 236 Query: 555 HAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANE---QFDL 611 A LGGA TT+VD++ L +N L AH + D + A + +FDL Sbjct: 237 AAALGGAEKTTSVDVANRSLAKTIEQFSVNKLDYEAHDIKVMDVFNYFSYAAKKDLRFDL 296 Query: 612 IFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRM-DLDGLAK 670 I +DPP+F+ +K+ F +D+ L+K+ + G I+ S N F M G Sbjct: 297 IILDPPSFARTKKR--TFSAAKDYKNLLKETIAITADKGVIVASTNSSAFGMKKFKGFID 354 Query: 671 LGLKAQE-----ITQKTLSQDFA 688 K I + TL +DF Sbjct: 355 AAFKETNERYTIIEEFTLPEDFK 377 >UniRef50_C2HC77 S-adenosyl-L-methionine-dependent methyltransferase n=37 Tax=Bacilli RepID=C2HC77_ENTFC Length = 392 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 73/316 (23%), Positives = 136/316 (43%), Gaps = 19/316 (6%) Query: 384 PDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYN-VAVDRYADWVVVQ 442 + K+ +K + + +R+++ + + +D YA + V Sbjct: 63 SQQDIPFDHSFFEELFVKSKEKRTFFFSDDSTTAFRIFNGEGDGIGGLIIDYYAGYAVFS 122 Query: 443 EYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLE 502 Y + R+ L + K+ ++ + + Y K E E L Sbjct: 123 WYNET----LYTHRELLIQAFREIYPEIIGGYEKIRFESVNLPESQFIYGK--EAPEPLI 176 Query: 503 VTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQ-MSKGKDFLNLFSYTGSATVHAGLGGA 561 V E V L + L TG+FLD + R L + + GK LN+FSYTG+ +V A +GGA Sbjct: 177 VKENGIKFAVYLNEGLMTGIFLDQKEVRGSLAEGFASGKTVLNMFSYTGAFSVAAAMGGA 236 Query: 562 RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQ---FDLIFIDPPT 618 TT+VD+++ L+ + +NGL ++I D + + A + +D+I +DPP+ Sbjct: 237 IETTSVDLAKRSLKKTQEQFEVNGLDVDQQKIIVMDVFQYFKYAKRKQFLYDMIVLDPPS 296 Query: 619 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD------LDGLAKLG 672 F+ +K+ F V +D+ L+KD +L G ++ S N ++ + Sbjct: 297 FARNKK--KVFRVAKDYGELVKDSLDILAENGILIASTNAANVSIEQFQTMIEEEFHAKN 354 Query: 673 LKAQEITQKTLSQDFA 688 + +++ L +DF Sbjct: 355 VSFEQLALYRLPKDFQ 370 >UniRef50_C4FU68 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FU68_9FIRM Length = 396 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 80/315 (25%), Positives = 136/315 (43%), Gaps = 17/315 (5%) Query: 386 SKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYN-VAVDRYADWVVVQEY 444 + R++ L + + + + +RL + + V VD YA ++ + Y Sbjct: 72 RDSQLDDNWVEKRVQAALSQRHSYFNRSDLTAFRLVNGEGDGLGGVTVDWYAGFIQLNWY 131 Query: 445 APPKTIDAHKARQRLFDIIAA-TISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEV 503 + + R L + A +LGI + + Q + +L + + Sbjct: 132 SQ----GIYHYRDELVSALKAHVSDILGIYETQRFDQQVAEQAINHLEGQL--APAPVII 185 Query: 504 TEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARS 563 E H ++L TGLFLD R R + Q + GK LNLFSYTG +V A +GGA Sbjct: 186 RENGIHYAIHLGQEWMTGLFLDQRQVRDYVMQGAAGKKILNLFSYTGGFSVAAAMGGASQ 245 Query: 564 TTTVDMSRTYLEWAERNLRLNGLTG--RAHRLIQADCLAWLREANEQ---FDLIFIDPPT 618 T +VD++ L + N LNG+ +AH + D ++R A + FD + DPP+ Sbjct: 246 TVSVDVANRSLAKTQENFALNGIEAPSQAHEIRVMDVFDYIRYAKRKGLTFDQVVCDPPS 305 Query: 619 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD--LDGLAKLGLKAQ 676 F+ +K+ F +D+ L DL L+ GG ++ S N + ++ A+ Sbjct: 306 FARTKKY--TFSALKDYGRLAADLWCLVAPGGQLVLSTNHSAYSLEDFKADCLAACPDAE 363 Query: 677 EITQKTLSQDFARNR 691 + L +DF R+ Sbjct: 364 LLAHFGLGEDFPRSE 378 >UniRef50_Q6MCD2 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MCD2_PARUW Length = 390 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 69/319 (21%), Positives = 121/319 (37%), Gaps = 13/319 (4%) Query: 379 VAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEY-NVAVDRYAD 437 + E RL K ++ YR + + +D Y D Sbjct: 61 IVGRMVSFNNVPPLETLKKRLISAWKFRQQLFDFRQTNAYRFVHGEGDAIPGLTIDVYQD 120 Query: 438 WVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEK 497 V+Q T + + + + + I ++ +E Q GE+ Sbjct: 121 VFVLQS----STKGIDELKPWIIETLNELFQPRSIFEKSILPSRKEEGLADVQKHLSGEE 176 Query: 498 GEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAG 557 + E NL TG FLDHR R+ + +S K LN FSYTG +V+A Sbjct: 177 VGDISFFENGLKFTTNLHKSQKTGFFLDHREMRQWIKTLSFNKKVLNAFSYTGGFSVYAM 236 Query: 558 LGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 617 GGA+ +VD+S+ + +++ LN L+ R I AD +LRE +DL+ +DPP Sbjct: 237 AGGAKRVDSVDISQEAVNACQKHFVLNELSEFGSRFICADVFNFLREDVLDYDLVILDPP 296 Query: 618 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGF------RMDLDGLAKL 671 F+ K+ +D R + + + + + ++ + ++ A+ Sbjct: 297 AFA--KKQKDVIAACRGYKDINRLAMQKMPRRSLLLTCSCSHHVNELLFQKVVFQAAAEA 354 Query: 672 GLKAQEITQKTLSQDFARN 690 + I + L+ D N Sbjct: 355 NRNVRLIGRHQLACDHPIN 373 >UniRef50_B7FV41 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FV41_PHATR Length = 710 Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 90/442 (20%), Positives = 164/442 (37%), Gaps = 62/442 (14%) Query: 6 ASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE-C 64 + GLE +L EL+ LG V + + ++ AS+++L G Sbjct: 263 VTCHPGLETVLSQELDALGIAHKIERNCAVLTNANLDTILSCHLYLGSASQVLLQCGTPF 322 Query: 65 KVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGL-NDTIRNSQYGAMKVKDAI------- 116 +L V+ + W + A V + +S ++ D I Sbjct: 323 TARGLPELQRKVEKLPWKNLIKTDAEVQVKVQATFKSKLLHSTAIRDRIIDGIKLSLGVL 382 Query: 117 -----------VDAF-----TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLH 160 ++ P+ P + + V + ++ ++L S LH Sbjct: 383 KKNPESDSSKSLERVPLKVPQESKGPKNEDGSQGPAVALTVRVMRDQVYLSLATSLTPLH 442 Query: 161 LRGYRDRAGIAPIKETLAAAIVMRSGWQPGT------------PLLDPMCGSGTLLIEAA 208 RGYR +G AP++E LA A++ SGW+P + L+DP CGSGT+ IEAA Sbjct: 443 QRGYRLESGKAPLREDLAYAMLYNSGWKPPSAARGESDTIAYDALVDPFCGSGTIAIEAA 502 Query: 209 MLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 268 +A PG R G +D A W ++ ++ + SD +A + Sbjct: 503 CMAAGLPPGRLRSA-PLEGTLFYDPAKWSKIV--MKSLRESSSQTNETKIVCSDRNAGAV 559 Query: 269 QRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYG------TVLSNPPYGERL------ 316 + A+ NA+ AGI +++ + + L G + N P+G+R+ Sbjct: 560 KIAKANAKRAGIPDMLDIQECAFTK-HPWLDVYQKGVKPRSLLIAGNLPFGQRISPSKSS 618 Query: 317 --DSEPALIALHSLLGRIMK-----NQFGGWNLSLFSASPDLLSCLQLRADKQ--YKAKN 367 +P + L+ L I+K + G N+ L + +L+ + K+ Sbjct: 619 SSKKKPQFLPLYQSLSTIVKSYGDQSNGGTCNIVLLTNDWNLVQRGAFPGSVKQGLGFKH 678 Query: 368 GPLDCVQKNYHVAESTPDSKPA 389 G +D + + + + Sbjct: 679 GGIDVSTALINSSSGETEDNES 700 >UniRef50_C8NHK6 SAM (And some other nucleotide) binding motif, PUA domain protein n=2 Tax=Granulicatella RepID=C8NHK6_9LACT Length = 397 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 73/319 (22%), Positives = 136/319 (42%), Gaps = 20/319 (6%) Query: 383 TPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYN-VAVDRYADWVVV 441 + + A+ ++ + + +RL++ + + V +D Y ++VV Sbjct: 66 SREEDEALDDAFFSGIFKTAFWNRRALLHSDDTTAFRLFNGEGDGFGGVTIDWYDGFIVV 125 Query: 442 QEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFL 501 Y+ + R + + K+ K E ++++ E E L Sbjct: 126 SWYSE----GVYHYRDLILTQALGAFEGVKGVYEKIRFKN-EADLPESRFVGGTEAPEPL 180 Query: 502 EVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQ-MSKGKDFLNLFSYTGSATVHAGLGG 560 V E + + L TG+FLD R R + Q S G+ LN FSYTG+ +V A +GG Sbjct: 181 IVLENGVKYATYMNEGLMTGIFLDQREVRETIRQRYSAGRTVLNTFSYTGAFSVAAAMGG 240 Query: 561 ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQ---FDLIFIDPP 617 A TT VD++ LE + +NG+ ++ D + + A ++ FD + +DPP Sbjct: 241 ATKTTCVDVANRSLEKTKEQFAVNGIDPETQQIYVMDVFDYFKYALKKQLTFDTVVVDPP 300 Query: 618 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRM-DLDGLAKLGLKAQ 676 +F+ +K+ F V +D+ L+ + L+ GT++ S N + + G++ Sbjct: 301 SFARTKKR--TFSVVKDYGTLVAQITPLVAPKGTLVLSTNAANVTESQFQQMIEQGIREA 358 Query: 677 E-------ITQKTLSQDFA 688 + + +K L DFA Sbjct: 359 DGNRRYRIVLKKGLPSDFA 377 >UniRef50_UPI00016C4550 methyltransferase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4550 Length = 395 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 72/316 (22%), Positives = 126/316 (39%), Gaps = 20/316 (6%) Query: 385 DSKPAMVAEDYTNRLRKNLKKFEKWARQEGIEC-YRLYDADLP-EYNVAVDRYADWVVVQ 442 + + + NRL L+ + G + YR+ ++ + VDRY DW+ VQ Sbjct: 69 EENVPLDEAFFRNRLATALRLRHDVLKLNGPDAGYRVCFSESDYLSGMVVDRYGDWLTVQ 128 Query: 443 EYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEF-L 501 A + R+ + + ++ GI + + GE L Sbjct: 129 FTA----LGIASRRETIVSALRELLNPKGIYLRTEKGVGKLEGVELHDQLLWGEPPPPDL 184 Query: 502 EVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGA 561 + E VNLT+ TG +LD R R + +++ GK FL+ F Y+G +HA GA Sbjct: 185 SILENGMRFLVNLTEGQKTGYYLDQRDNRAAVARLAPGKRFLDAFCYSGGFGLHAARAGA 244 Query: 562 RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW---LREANEQFDLIFIDPPT 618 +D S LE A RN LNGL A + + L + +FD++ +DPP Sbjct: 245 AEVLCLDGSEPALELARRNAALNGLENVA--FERVNVFNHLGTLATSGRKFDVVVLDPPK 302 Query: 619 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRM-DLDGL-----AKLG 672 F+ ++ + + + L + +LL G ++ M DL+ + + Sbjct: 303 FARNRGAIP--EALKGYRRLHQLALKLLAPDGVLVSCCCTGLITMLDLEEMLAQVAVEAK 360 Query: 673 LKAQEITQKTLSQDFA 688 Q + ++ + D Sbjct: 361 RDVQIVERRGPAPDHP 376 >UniRef50_C8W8S0 SAM-dependent methyltransferase n=2 Tax=Atopobium RepID=C8W8S0_ATOPD Length = 439 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 68/350 (19%), Positives = 137/350 (39%), Gaps = 51/350 (14%) Query: 383 TPDSKPAMVAEDYTNRLRKNLKKFEKW-------ARQEGIECYRLYDADLPEY-NVAVDR 434 T ++ + ++ ++ K + + C R+ ++ + + VDR Sbjct: 78 TRNANDRLNEAFWSRKISWAWKHRKTIMGNRALPGTESDTNCCRVIFSEADGFPGLIVDR 137 Query: 435 YADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTR---ERQKGKNQY 491 Y + +V Q T+ + R ++ ++ +S G + + + ++G QY Sbjct: 138 YENVLVAQ----VGTVGMERLRNVIYPLLLEVLSSDGQVIDGIYERNDSPSRLKEGLPQY 193 Query: 492 QKL--GEKGE---------------FLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLG 534 + G + + TE ++L + TG FLD + RR + Sbjct: 194 KGWWTGTSPDENGLIAESSLTSPSTHVLATENGLKFNLDLENSQKTGFFLDQKYNRRAVR 253 Query: 535 QMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLI 594 Q+++G L+ F + G ++A GGA VD+S+T ++ A +N LNGL R Sbjct: 254 QLAQGHRVLDCFCHVGPFGLNATAGGADFVRCVDVSQTAIDLARQNAELNGLADR-IDFT 312 Query: 595 QADCLAW----------LREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKR 644 A+ L + L+ FDLI +DPP F+ ++ + R + + + Sbjct: 313 CANVLEYLPELARDRTQLKAEGGPFDLIILDPPAFTKTR--DKVRSAMRGYKEINATAMK 370 Query: 645 LLRAGGTIMFSNNKRGFRMDL------DGLAKLGLKAQEITQKTLSQDFA 688 LL GG + + DL + ++ ++I ++ + D Sbjct: 371 LLPRGGYLATCSCSHFMTRDLLAQAIAEAAHHTNVQLKQIEERQQAPDHP 420 >UniRef50_A8VSD5 Oligopeptide/dipeptide ABC transporter, ATPase subunit n=2 Tax=Bacillus RepID=A8VSD5_9BACI Length = 398 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 73/312 (23%), Positives = 132/312 (42%), Gaps = 19/312 (6%) Query: 392 AEDYTNRL-RKNLKKFEKWARQEGIECYRLYDADLPEYN-VAVDRYADWVVVQEYAPPKT 449 +D+ +RL K + + + +R+++ + + V +D Y + V+ Y+ Sbjct: 76 NQDFIDRLILKAIGVRQGYYEDASTTAFRVFNGEGDGFGGVIIDYYERYYVIHWYSE--- 132 Query: 450 IDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAH 509 A++ +++ D + +GI K K + + + + + L V E N Sbjct: 133 -GAYQFKEQFVDSLLRNSDAIGIYEKKRFAKAGQYVE-DDDFVTGEQAPSPLVVFENNVS 190 Query: 510 LWVNLTDYLDTGLFLDHRIARRM-LGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVD 568 + V+L D G F D R RR L + +KG+ LN FSYTG +V A LGG+ T VD Sbjct: 191 IAVDLNDGAMVGFFHDQREVRRAILEKHAKGRTVLNTFSYTGVFSVFAALGGSLKTVNVD 250 Query: 569 MSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRM 625 + E +N L H +I D +L+ F ++ +DPP+F+ +K+ Sbjct: 251 AANRSKEKTAEQFAMNQLDAEDHDIIVDDAFQFLKRTERRGRTFGMVILDPPSFARTKKT 310 Query: 626 EDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL------DGLAKLGLKAQEIT 679 F ++D+ L+ D + G I+ S N G + + G+ + + Sbjct: 311 --TFSAKKDYKKLLLDAIAVTEENGIIVASMNHAGVAPQRFRKTVGEAFQEAGVPFRVLE 368 Query: 680 QKTLSQDFARNR 691 L DF + Sbjct: 369 SFGLPSDFKTDP 380 >UniRef50_O67850 Putative uncharacterized protein n=2 Tax=Aquificaceae RepID=O67850_AQUAE Length = 391 Score = 244 bits (623), Expect = 9e-63, Method: Composition-based stats. Identities = 66/269 (24%), Positives = 127/269 (47%), Gaps = 16/269 (5%) Query: 399 LRKNLKKFEKWARQE--GIECYRLYDADLPE-YNVAVDRYADWVVVQEYAPPKTIDAHKA 455 +RK +K+ ++ ++ YRL ++ + VD Y ++ V+ T ++ Sbjct: 78 IRKRIKQAYEYRKRLYINSNAYRLVHSEGDLLPGLIVDVYGSYLAVEF----TTYGMNQF 133 Query: 456 RQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLT 515 R+ + D + + GI + R + GE E + + E++ ++N+ Sbjct: 134 REVILDTLVELLRPKGIYEKVNEIAKRVEGLDVEERVIYGEVPEEVIIWEHDLKYYINIP 193 Query: 516 DYLDTGLFLDHRIARRMLGQMSK-GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYL 574 TG FLD R AR+ + + + G L++F +TG ++ GA VD+S L Sbjct: 194 QGQKTGFFLDQRNARKFVRNLVEPGDRCLDVFCHTGGFALNMKRAGAGEVIGVDISELAL 253 Query: 575 EWAERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAFDV 631 + AE+N RLNG T + ++A+ +LR + E+FD+I IDPP+F+ ++ + Sbjct: 254 KEAEKNARLNGFTD--IKWVKANAFDYLRELDKKGEKFDVIIIDPPSFAKNRAA--VPNA 309 Query: 632 QRDHLALMKDLKRLLRAGGTI-MFSNNKR 659 R + L ++ ++GG + +FS + Sbjct: 310 LRGYKELCVRGLKIAKSGGYLAIFSCSFH 338 >UniRef50_D0LIJ5 Putative RNA methylase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIJ5_HALO1 Length = 398 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 101/396 (25%), Positives = 156/396 (39%), Gaps = 34/396 (8%) Query: 9 ARGLEELLKTELENLGAVEC--------QVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + G +++ E L +V G + + + ++ + R A+R Sbjct: 12 SPGTNKVMAAEFIRLCQRAISQRPPAPRKVGSGMLVYPFEPEQARVAVHYLRTATRAQWD 71 Query: 61 LGECKVYSDLDLYLGVQ---AINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIV 117 + LY + A + + GA +V + + VK+A++ Sbjct: 72 IFRSDAPRLEPLYDELVDDVAADRRDWLWDGARISVRARNVAGFAAGERQIVGTVKNALL 131 Query: 118 DAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETL 177 D R VD PDI V+V + +++DL+G L RGYR G AP++E L Sbjct: 132 DG-AEARGIRLEVDPQHPDIHVSVRQIDDELLVSVDLAGASLSQRGYRADRGAAPLREHL 190 Query: 178 AAAIVMRSGWQP-GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 AA ++M + P PLLDPMCG+GT+ IEAA++A G H + + E Sbjct: 191 AAVLLMLARHDPRSEPLLDPMCGAGTIAIEAALMARAAPLGEHIHTAAYRVLPRFSE--- 247 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGI--GELITFEVKDVAQL 294 + EA A+ + G++ D R + AR NA AG+ + T+ D +L Sbjct: 248 ---RGEAPPLDAPLFADTRATVLGNELDGRTLDAARHNAHAAGLGGDDACTWLRGDFRRL 304 Query: 295 TNP-----------LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLS 343 T G +L NPPYG RL P L L+ LG + F GW Sbjct: 305 TRKRVEERIARISDADPQRPGLILCNPPYGHRL-EPPELHRLYRDLGEWCRQ-FRGWRAG 362 Query: 344 LFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHV 379 F + D R + NG L Y + Sbjct: 363 FFVGNRDFEPTFGGRPRVRKPLNNGSLAACFYLYDL 398 >UniRef50_A5IRW8 SAM-dependent methyltransferase-like protein n=66 Tax=Staphylococcaceae RepID=A5IRW8_STAA9 Length = 390 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 79/320 (24%), Positives = 140/320 (43%), Gaps = 24/320 (7%) Query: 385 DSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYN-VAVDRYADWVVVQE 443 D + + L + + + +G +RL++A+ + +D Y +++Q Sbjct: 67 DKAQEINTAFFVKLFNTALAERDYYFNIDGTNAFRLFNAEGDGVGGLTIDNYDGHLLIQW 126 Query: 444 YAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEV 503 Y+ +K + + + + I K+ K E G + G+ EF V Sbjct: 127 YSK----GIYKFKYAILEAVRKVFDYKSIY-EKVRFKDSEYSGGFVE----GDAPEFPIV 177 Query: 504 TEYNAHLW-VNLTDYLDTGLFLDHRIARRMLG-QMSKGKDFLNLFSYTGSATVHAGLGGA 561 E N + V+L D L TG+FLD + R+ L Q +K + LNLFSYTG+ +V A A Sbjct: 178 IEENFTFYNVDLEDGLMTGIFLDQKEVRKKLRGQYAKERHVLNLFSYTGAFSVIAASE-A 236 Query: 562 RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQ---FDLIFIDPPT 618 STT+VD++ E N LN + ++ + D + + A +D I IDPP+ Sbjct: 237 SSTTSVDLANRSRSLTEENFGLNAIDPKSQYIYVMDTFDFYKYAARHGHSYDTIVIDPPS 296 Query: 619 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD------LDGLAKLG 672 F+ +K+ F VQ+D+ L+ +L + GT++ N + + L + G Sbjct: 297 FARNKKR--TFSVQKDYDKLINGALNILSSEGTLLLCTNASVYPLKQFKNTIKKTLEESG 354 Query: 673 LKAQEITQKTLSQDFARNRQ 692 + + L +DF + Sbjct: 355 VDYELTEVMGLPKDFKTHPH 374 >UniRef50_Q2LSE2 SAM-dependent methyltransferase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSE2_SYNAS Length = 401 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 84/298 (28%), Positives = 130/298 (43%), Gaps = 14/298 (4%) Query: 391 VAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQEYAPPKT 449 A + R+R + RL +A+ + VDRY D +V T Sbjct: 81 DAHFWRERVRFAEALRRRILP-PDTTACRLINAEGDGLPGLIVDRYDDVLVC----SIAT 135 Query: 450 IDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLG--EKGEFLEVTEYN 507 K R + D + S GI R + G E+G+ + V E Sbjct: 136 AGMEKNRTAVLDALTGVCSPRGIYERSEGRARRLEGLEERSGWIYGSCEEGKRIPVRENG 195 Query: 508 AHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTV 567 + V++ TG FLD R R+ + +S+G LN FSY+G+ +V+A GGA +V Sbjct: 196 LYFEVDIVGGQKTGFFLDQRSNRKGVAGLSRGMTLLNCFSYSGAFSVYAARGGAERVVSV 255 Query: 568 DMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMED 627 D+S + A +L+ NG + H +I+AD +WLRE E FD I +DPP F+ S++ D Sbjct: 256 DVSEGANDMARFHLKKNGFSTERHPVIRADVFSWLRETEEVFDGIILDPPAFAKSRK--D 313 Query: 628 AFDVQRDHLALMKDLKRLLRAGGTIM-FSNNKRGFRMDLDGLAKLGLKAQEITQKTLS 684 R + + + L+ GG + FS + MD K+ L A T K++ Sbjct: 314 IARSARGYKDINLQAMKHLQNGGLLWTFSCSS---FMDEALFQKVVLGAACDTGKSVQ 368 >UniRef50_Q1Q2N3 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q2N3_9BACT Length = 317 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 83/292 (28%), Positives = 138/292 (47%), Gaps = 26/292 (8%) Query: 399 LRKNLKKFEKWARQEGIECYRL---YDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKA 455 + K L + + YRL Y +LPE +D Y + V+VQ + + Sbjct: 10 IEKALSFRKGYIDNAHTNVYRLLNSYGDNLPE--ATIDIYDNTVLVQYFKTH----EDRT 63 Query: 456 RQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLG---EKGEFLEVTEYNAHLWV 512 ++ +++ + I+P ++ K ER KG++ +L E + V E Sbjct: 64 KKEIYEAVQKL-----ISPECIIEK--ERLKGRDVVTRLISGKEIPDNYVVIENGIQFCT 116 Query: 513 NLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRT 572 + D TGL+LD R R+ + ++GK+ LN F YT S +V+A GGA TT +D+S Sbjct: 117 SFNDGGGTGLYLDQRDNRKKVQSFARGKEILNCFCYTSSFSVYACAGGAAKTTNIDLSGK 176 Query: 573 YLEWAERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAF 629 + W++ N LN + H I D + + + ++FD+I +DPP+FS SK F Sbjct: 177 AIAWSKNNYVLNQIDVNNHDFIAGDVWEYFKIFQKRGKEFDVIILDPPSFSTSKSR--TF 234 Query: 630 DVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQK 681 V++D L+ +LR G ++FS N +M L L + K + T+K Sbjct: 235 TVEKDFPELVGLGLNILRENGILVFSTNIA--KMTLSRLFQSLPKIKSHTKK 284 >UniRef50_A4J674 SAM-dependent methyltransferase n=33 Tax=Bacteria RepID=A4J674_DESRM Length = 418 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 70/324 (21%), Positives = 135/324 (41%), Gaps = 21/324 (6%) Query: 376 NYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLP-EYNVAVDR 434 V T +S+ + E + R++ + +K R+ R+ + + VD+ Sbjct: 86 QITVRIMTRNSEEEINEEFFRKRIQGAWEYRQKVVRESN--ACRVIFGEADFLPALIVDK 143 Query: 435 YADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKL 494 + D++ VQ A + ++ +F ++ + G+ V R+ + + Sbjct: 144 FGDYLSVQTLA----LGIDVHKETIFKLLQEIVQPKGMYERNDV-SVRKLEGLPLITGFI 198 Query: 495 GEKGEF-LEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSAT 553 GE + + + E V+L TG FLD R R L + KG L+ F +TG+ + Sbjct: 199 GEPFDPKVVIKENGIQFVVDLEGGQKTGYFLDQRENRMALQGLVKGSRVLDCFCHTGTFS 258 Query: 554 VHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFD 610 ++A GA+ +D++ LE A N +LNG R + + LR A E+FD Sbjct: 259 MYATKYGAKEVLGLDIAAPALEVARVNAQLNGYGDRC-TFKECNSFDELRAMERAEEKFD 317 Query: 611 LIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD------ 664 ++ +DPP F+ S++ + R + + +LL GG ++ + D Sbjct: 318 VVILDPPAFTKSRKAIEG--AIRGYKEINLRGMKLLPPGGYLITCSCSYHMHEDMFLDVI 375 Query: 665 LDGLAKLGLKAQEITQKTLSQDFA 688 LD G + + + + ++D Sbjct: 376 LDAARDAGRQLRLVELRRQAKDHP 399 >UniRef50_C7N186 SAM-dependent methyltransferase n=13 Tax=Bacteria RepID=C7N186_SLAHD Length = 416 Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 69/327 (21%), Positives = 138/327 (42%), Gaps = 29/327 (8%) Query: 383 TPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEY-NVAVDRYADWVVV 441 T ++ + ++R + + + + C R+ + + + VDR+ D +V Sbjct: 79 TRNANDRFDQAFWERKVRWSWEYRKS-VMGADVSCCRVVFGEADGFPGLVVDRFNDVLVT 137 Query: 442 QEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLK---------TRERQKGKNQYQ 492 Q T + + +F ++A +S G+A + + T ++ G Sbjct: 138 QTL----TFGMEQLKPVVFPVLAKVLSEDGVALRGIYERNDVATRKLETLDQSCGWFDLG 193 Query: 493 KLGEKGEFL-EVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGS 551 + G+ E+ E V+ + TG FLD + RR + ++ GK L+ F++TGS Sbjct: 194 GVSAGGDTTTEICENGVRYQVDFENGQKTGFFLDQKYNRRAVAALASGKRVLDCFTHTGS 253 Query: 552 ATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANE---- 607 ++A +GGA VD+S+ ++ A N RLNG R + L + E Sbjct: 254 FALNAAVGGAEFVNAVDVSQLAIDQARANARLNGCEDRMA-FTCTNVFDLLPQMEEDRDH 312 Query: 608 QFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK------RGF 661 +D I +DPP F+ S++ + R + + +LL GG + ++ R Sbjct: 313 SYDFIILDPPAFTKSRKTIGS--ASRGYKEINYRAMKLLPRGGYLATASCSHFMDTERFR 370 Query: 662 RMDLDGLAKLGLKAQEITQKTLSQDFA 688 RM ++ G++ +++ ++ + D Sbjct: 371 RMLVEAAHDAGVQLKQVEERQQAPDHP 397 >UniRef50_A3J3C9 Putative uncharacterized protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J3C9_9FLAO Length = 388 Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats. Identities = 66/313 (21%), Positives = 122/313 (38%), Gaps = 19/313 (6%) Query: 386 SKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEY-NVAVDRYADWVVVQEY 444 + + ++L+ + K E +R+ + + +D Y V+Q + Sbjct: 70 GDESFSENFWASKLQSAWELRWKLLDLEVTNAFRVIHGEGDGIPGLIIDYYDKNWVIQAH 129 Query: 445 APPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKG-KNQYQKLGEKGEFLEV 503 + + + I A S + K+ Y G + E + Sbjct: 130 STGIFLQMEQ-------IAEAIKSNFSTYCETIYCKSSGTLPNIGTDYFLFGNRAEAV-A 181 Query: 504 TEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARS 563 E N VN + TG FLD R R++LG+ SKGK LN F YTG +++A GA Sbjct: 182 KENNILFSVNWVEGQKTGFFLDQRENRKLLGEFSKGKKVLNTFCYTGGFSIYAMSSGAEL 241 Query: 564 TTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSK 623 T+VD+S+ ++ A N+ LN H+ + D +++E +Q+D+I +DPP F+ S Sbjct: 242 VTSVDISQKAVDLAASNMELN-FPNANHKAVADDVFNFMKEHTQQYDVIILDPPAFAKSI 300 Query: 624 RMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR------GFRMDLDGLAKLGLKAQE 677 + + + + L + L G + + + + + G + Sbjct: 301 KSKHT--ATQAYKRLNIAGLKALAPNGILFTFSCSQVIDDVLFYNTVAAAAIETGRNIRV 358 Query: 678 ITQKTLSQDFARN 690 + + D N Sbjct: 359 LHKLEQGPDHPTN 371 >UniRef50_B2UZQ1 Methyltransferase n=3 Tax=Clostridium botulinum RepID=B2UZQ1_CLOBA Length = 407 Score = 241 bits (615), Expect = 8e-62, Method: Composition-based stats. Identities = 73/314 (23%), Positives = 138/314 (43%), Gaps = 19/314 (6%) Query: 390 MVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYN-VAVDRYADWVVVQEYAPPK 448 + + ++LR K K + +R+++ + +D + ++ ++ Y+ Sbjct: 75 FDNKFFYDKLRNAFSKRMKLYHSKDTNAFRVFNGSGDGIGGLTIDYFDEYYLITWYSK-- 132 Query: 449 TIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNA 508 + ++ + I + +S GI K + Y + E L V E N Sbjct: 133 --GMYAFKEYIIKSIKSLVSFEGIYEKKRFEDNGMVVDEDSYYCGQ-KAPEPLVVKENNV 189 Query: 509 HLWVNLTDYLDTGLFLDHRIARRMLGQ-MSKGKDFLNLFSYTGSATVHAGLGGARSTTTV 567 + + L D G+FLD + R+ + S GK LN FSYTG+ ++ A +GGA TT+V Sbjct: 190 NFAIYLNDGAMVGVFLDQKDVRKSIKNTYSNGKRVLNTFSYTGAFSMAAAMGGAI-TTSV 248 Query: 568 DMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREAN---EQFDLIFIDPPTFSNSKR 624 D++ L+ N +N + H +I D + +EA ++FD++ +DPP+++ SK Sbjct: 249 DLAGRSLKKTIENFEINKIDSNNHEIIVEDIFHYFKEAKKDNKKFDVVILDPPSYATSK- 307 Query: 625 MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL------DGLAKLGLKAQEI 678 ++ F ++ L+K + G I+ S N F M+ + K + Sbjct: 308 -DNTFSAASNYKDLVKSAIDVTEDEGVIVCSTNCSTFNMNKFKKFIDKAFLESNKKYFIL 366 Query: 679 TQKTLSQDFARNRQ 692 + TL DFA + + Sbjct: 367 EEHTLPDDFAVSDK 380 >UniRef50_A8DJY9 SAM-dependent methyltransferase n=2 Tax=Bacteria RepID=A8DJY9_9BACT Length = 425 Score = 241 bits (615), Expect = 8e-62, Method: Composition-based stats. Identities = 73/314 (23%), Positives = 127/314 (40%), Gaps = 18/314 (5%) Query: 389 AMVAEDYTNRLRKNLKKFEKWARQ----EGIECYRLYDADLP-EYNVAVDRYADWVVVQE 443 A D +R+NL + R+ RL + + + VD+YAD +V+Q Sbjct: 101 AFGDTDPYTAIRQNLTHAVAFRRKHFDPAQTNAVRLVNGEGDMLPGLIVDQYADVLVMQI 160 Query: 444 YAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEV 503 T+ + + + + + I + E G L V Sbjct: 161 ----STLGMERLKPFVLETLVELTQPRAIYEKSDIAARYEEGLTDFAGLIYGRDFGPLVV 216 Query: 504 TEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARS 563 TEY V++ TGLFLD R R ++ ++ G+ LN F+YTG +++A G A+ Sbjct: 217 TEYGLRFHVDIKHGQKTGLFLDQREMRALVERLCTGRRVLNGFAYTGGFSLYAHRGRAQR 276 Query: 564 TTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREAN-EQFDLIFIDPPTFSNS 622 +VD S + L+ A+ N LNG + ++AD +LR FD I +DPP + Sbjct: 277 VVSVDSSGSALKLAQSNHALNGFSVTDDDFVEADMFTYLRRLEAAAFDFIILDPPALA-- 334 Query: 623 KRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGF------RMDLDGLAKLGLKAQ 676 ++ ED R + L + + GG ++ S+ ++ + G + + Sbjct: 335 RKREDVLRAGRAYKDLNRLAIAKVAPGGLVLTSSCSHFVDEKLFGQIVFQAACEAGRQVR 394 Query: 677 EITQKTLSQDFARN 690 I + + D N Sbjct: 395 IIHRHRQAFDHPVN 408 >UniRef50_Q3ITL0 Putative uncharacterized protein n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3ITL0_NATPD Length = 360 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 158/373 (42%), Gaps = 24/373 (6%) Query: 3 SLFASTARGLEELLKTELENL-GAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 L A+T GLE + EL L GA + +G V F+G VY+ +R RIM L Sbjct: 2 QLLATTNGGLESVAAAELRELTGAEATRHHRGVVAFEGTVEDVYELHYRARSLHRIMAVL 61 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 + V D+Y + + P ATF V + S A +V A++DA+ Sbjct: 62 VDTPVAGLDDIYATTADMPVADRL-PEATFGVVGTRHGTHEFTSMDVADRVGQAVIDAYR 120 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 R VD D P +R+ +L+ E ++A+DL+G+ LH R YR AP++ TLA + Sbjct: 121 EATGTRLPVDLDDPTVRLEAYLYDERFTLAVDLTGESLHRRPYRVCEHDAPLRGTLAYQL 180 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + + + L+DPM GS T+ IEAA+ ATD P F+ + D Sbjct: 181 LRLADYSADDRLVDPMAGSATIPIEAALDATDAVPRPDLDP-AFTVLPRFDGD------R 233 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 + RA E + D+ + + AR N AG + + D + + Sbjct: 234 FRRRRAAHTRREAAVDITARDNQTQWRECARENREAAGFEDEVDIVAADAREASLDADC- 292 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGW--NLSLFSASPDLLSCLQLRA 359 V++N P+G R+ L L+S + G L + P L L L Sbjct: 293 ----VVTNLPFGIRV--TGDLRRLYSEFAERV---TDGSVDRLVALTTKPGL---LPLSP 340 Query: 360 DKQYKAKNGPLDC 372 D+Q+ G +D Sbjct: 341 DEQHDIPYGRIDA 353 >UniRef50_C7GB40 Methyltransferase n=13 Tax=Bacteria RepID=C7GB40_9FIRM Length = 403 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 68/307 (22%), Positives = 137/307 (44%), Gaps = 20/307 (6%) Query: 399 LRKNLKKFEKWARQE-GIECYRLYDADLP-EYNVAVDRYADWVVVQEYAPPKTIDAHKAR 456 L+ +K ++ + R+ + + VD+Y D +VV+ A + + + Sbjct: 79 LQMRVKNAWEYRKTTVDTSSCRVIFGEADFLPGLVVDKYEDVLVVECLA----LGMEQFK 134 Query: 457 QRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKL-----GEKGEFLEVTEYNAHLW 511 + + ++ ++ GI + ++ ++ K K+ E +E+ E Sbjct: 135 ETIVSLLKEELAKDGIKVRGVYERSDANERTKEGLPKVKGFIGEEFDTNVEIKENGVRYL 194 Query: 512 VNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSR 571 V++ + TG FLD + R + ++ KGK L+ F++ G+ ++AG+ GA T +D+S Sbjct: 195 VDVVNGQKTGFFLDQKYNRLAMQRICKGKKVLDCFTHMGTFALNAGIAGAADVTGLDISE 254 Query: 572 TYLEWAERNLRLNGLTGRAHRLIQADCLA---WLREANEQFDLIFIDPPTFSNSKRMEDA 628 ++ A N R NGL H A+ L L ++ EQ+D++ +DPP F+ S+ + Sbjct: 255 YAVQQANENARRNGLEDTVH-FRCANVLDELPKLAQSGEQYDVVILDPPAFTKSR--QAT 311 Query: 629 FDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQ-DF 687 + + + + +L++ GG + + +L LAK +A + K L Q +F Sbjct: 312 KNAIKGYREINMKGLKLVKDGGYLATCSCSHFMTQEL--LAKTVKEAAKAAHKRLRQVEF 369 Query: 688 ARNRQIH 694 H Sbjct: 370 RTQAPDH 376 Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Query: 260 GSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK--GPYGTVLSNPP 311 G D +Q+A NAR G+ + + F +V L + Y V+ +PP Sbjct: 249 GLDISEYAVQQANENARRNGLEDTVHFRCANVLDELPKLAQSGEQYDVVILDPP 302 >UniRef50_C6XXB0 PUA domain containing protein n=4 Tax=Sphingobacteriaceae RepID=C6XXB0_PEDHD Length = 394 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 82/368 (22%), Positives = 143/368 (38%), Gaps = 34/368 (9%) Query: 343 SLFSA-------SPDLLSCLQLRADKQ----YKAKNGPLDCVQKNYHVAESTPDSKPAMV 391 +FS +P+ + LR+ + Y N Q + D + Sbjct: 20 WIFSGAIDKIKGNPENGEVVTLRSAAKEFLAYAYYN-----DQSRVALRLLEWDENTTIN 74 Query: 392 AEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLP-EYNVAVDRYADWVVVQEYAPPKTI 450 Y +L+ + + E RL ++ + VD+YA ++ +Q + Sbjct: 75 KSWYREKLKAAIASRDHVL-NENTNTCRLVFSEADFLPGLIVDKYAGFLSLQILSA---- 129 Query: 451 DAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGE-KGEFLEVTEYNAH 509 + L +++ ++ GI + Q GE EF+EV E Sbjct: 130 GMESIKATLIELLRELLNPTGIFDKSDAGARKHENLEATQGLLWGETPPEFIEVKENGIL 189 Query: 510 LWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDM 569 +N+ D +G + D R R++L ++GK L+ F Y+G T+++ GA S T+VD Sbjct: 190 YHINIADGQKSGFYCDQRDNRKILADYTRGKSVLDCFCYSGGFTLNSLKSGAASVTSVDS 249 Query: 570 SRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRME 626 S +E + NL LNG G IQ+D LR + + FD++ +DPP ++ S+ Sbjct: 250 SALAIETLQHNLELNGFKGSNQHSIQSDVNKQLRIFKDEGKTFDVLVLDPPKYAPSRSAL 309 Query: 627 DAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLD------GLAKLGLKAQEITQ 680 D R + L + LL+ GG + + M+ G + Q I Q Sbjct: 310 D--RAARAYKDLNRLGMLLLKKGGILATFSCSGAVDMETFKQIIAWAALDAGREVQIIRQ 367 Query: 681 KTLSQDFA 688 +D Sbjct: 368 FCQPEDHP 375 >UniRef50_C9L1Z6 PUA domain protein n=33 Tax=Bacteria RepID=C9L1Z6_9BACE Length = 330 Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 69/320 (21%), Positives = 121/320 (37%), Gaps = 26/320 (8%) Query: 386 SKPAMVAEDYTNRLR--KNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQ 442 + + + + +L ++++ A YRL + + +D YA V+Q Sbjct: 5 QQEPINHDFWKRKLEIAYDMRRSIGIATNPANNTYRLVHGEGDNLPGLVIDVYAKTAVMQ 64 Query: 443 EYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKT------RERQKGKNQYQKLGE 496 ++ +D I A V+G + K+ + +N + K G Sbjct: 65 AHSAGMHVD-------RMVIAEALSEVMGDQIENIYYKSETTLPFKADLFPENGFLKGGS 117 Query: 497 KGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHA 556 EY V+ TG F+D R R +L + +KG+ LN+F YTG + +A Sbjct: 118 NDN--IAQEYGLKFHVDWLKGQKTGFFVDQRENRSLLERYAKGRSVLNMFCYTGGFSFYA 175 Query: 557 GLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 616 GGA+ +VD S ++ +N+ LN H D +L +Q+DLI +DP Sbjct: 176 MRGGAKLVHSVDSSAKAIDLTNKNVELNFPGDLRHEAFAEDAFKYLDRMGDQYDLIILDP 235 Query: 617 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD------LDGLAK 670 P F+ K + + + L ++ GG + + + D A Sbjct: 236 PAFAKHKDALR--NALQGYRKLNAKAFEKIKPGGILFTFSCSQVVSKDNFRTAVFTAAAM 293 Query: 671 LGLKAQEITQKTLSQDFARN 690 G + + Q T D N Sbjct: 294 SGRSVRILHQLTQPADHPVN 313 >UniRef50_D2R1D4 Methyltransferase small n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R1D4_9PLAN Length = 434 Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 77/343 (22%), Positives = 134/343 (39%), Gaps = 32/343 (9%) Query: 365 AKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEG-------IEC 417 NG Q V T + + A+ + R+ ++ + + Sbjct: 72 FYNG-----QSRIRVRLFTWREEEQLNADFFERRIADAIESRVQLGLEPAAGSPARSTSA 126 Query: 418 YRLYDADLPE-YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNK 476 RL ++ + VDRY D++VVQ + + + +I+ ++ G+ Sbjct: 127 ARLIFSEADGLSGLVVDRYGDYLVVQATSAA----MQQRLHGIAEILQKLLAPKGMVLRG 182 Query: 477 LVLKTRERQKGKNQYQKLGE-KGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQ 535 + ++LGE E + + E+ V+LTD TG +LD R R + + Sbjct: 183 DAASAKLEGIEPIAPERLGEWTDEPIRIVEHGISYEVDLTDSQKTGFYLDQRDNRLAVAK 242 Query: 536 MSKGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLI 594 G+ L++F YTG ++A G A VD S+ + A++N +NGLT Sbjct: 243 YFAGRKVLDMFCYTGGFAMNASRHGQAAEVLGVDTSKRAVAQAQKNAEINGLTN--VTFE 300 Query: 595 QADCLAWLRE---ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGT 651 D L + +FD I +DPP F+ S+ D + + L + LL GG Sbjct: 301 AGDGFQSLEKFATEGRKFDAIVLDPPKFARSRSQVD--QAIQAYHRLNRAAVALLPPGGI 358 Query: 652 IMFSNNK-----RGFRMDLDGLA-KLGLKAQEITQKTLSQDFA 688 ++ + F + L G+A K G Q I + + D Sbjct: 359 LVTHSCSGSVSREDFLLMLSGVAQKTGRDIQIIELRGAAADHP 401 >UniRef50_Q7ND71 Glr4365 protein n=1 Tax=Gloeobacter violaceus RepID=Q7ND71_GLOVI Length = 407 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 82/327 (25%), Positives = 138/327 (42%), Gaps = 19/327 (5%) Query: 373 VQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVA 431 Q V + + + R K L+ ++ ++ +R + + Sbjct: 70 RQSQIAVRYLERGADVVIDRAWWIERFGKALEHRHRFL-GPQVKTFRWIHGEADGLPGLT 128 Query: 432 VDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQY 491 VDRY D+VVVQ A + R+ + + +A S LGI R + Sbjct: 129 VDRYGDFVVVQLLA----LGLEPWREVIVECLAQLGSPLGIFERSDAPVRRLEGLKERVG 184 Query: 492 QKLGE-KGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTG 550 GE +E+ E +A L V++ TGLFLD R R+ + ++G++ LN F YTG Sbjct: 185 CLWGEAPPTLVEIEEGSARLLVDIQQGQKTGLFLDQRFNRQHAARFAEGRNVLNAFGYTG 244 Query: 551 SATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE---ANE 607 + V L GA S VD++ AE+N +LNG+ G R + A+ LRE Sbjct: 245 AFGVQCALAGASSVLNVDIAEAATAIAEQNAQLNGV-GEQCRALTANAFDVLREFDREGR 303 Query: 608 QFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL-- 665 +F++I +DPP F+ S+ + + R + + +LL GG ++ + M++ Sbjct: 304 RFEMIILDPPAFAKSRSVLEG--ALRGYKEINLRAMKLLTPGGILVTCSCSSHLSMEMFR 361 Query: 666 ----DGLAKLGLKAQEITQKTLSQDFA 688 D G A + Q+ + D Sbjct: 362 DVIRDAAQDTGRTACLVEQRGQAPDHP 388 >UniRef50_C7H850 Methyltransferase n=8 Tax=Bacteria RepID=C7H850_9FIRM Length = 409 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 63/333 (18%), Positives = 126/333 (37%), Gaps = 28/333 (8%) Query: 376 NYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEY-NVAVDR 434 V + ++ A + R+ + + R+ + ++ + VDR Sbjct: 66 KIRVRLISRNANDTFDAAFWKRRVEYAWAYRKTVLEPADLTACRVIFGEADQFPGLTVDR 125 Query: 435 YADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQY--- 491 + + +V Q ++ K + LF ++A + G + + + E + K Sbjct: 126 FNNILVTQTL----SVGMEKLKPILFPLLAEVLRADGQTIDGIYERNDEALRAKEGLAQN 181 Query: 492 -------QKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLN 544 + E+ E V+ + TG FLD + RR + +++ G L+ Sbjct: 182 KGWFDLPGETHPDSTKTEICENGVFYHVDFENGQKTGFFLDQKYNRRAVARIAAGHTVLD 241 Query: 545 LFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW--- 601 F++TGS ++A GGA T D+S + A+RN + N LT + D Sbjct: 242 CFTHTGSFALNAAKGGAARVTAADISAEAIAMAQRNAQRNNLTN--MDFLCEDTFELLPR 299 Query: 602 LREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR-- 659 L + +D I +DPP F+ ++R + + R + + +LL GG + ++ Sbjct: 300 LEKEGHPYDFIILDPPAFTKARRTVE--NAMRGYKEINYRAMKLLPRGGYLATASCSHFA 357 Query: 660 ----GFRMDLDGLAKLGLKAQEITQKTLSQDFA 688 +M + ++I K + D Sbjct: 358 TEELFIKMLHAAAKDAHRQLRQIEVKQQAPDHP 390 >UniRef50_C0QT70 Methyltransferase n=2 Tax=Hydrogenothermaceae RepID=C0QT70_PERMH Length = 394 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 70/299 (23%), Positives = 134/299 (44%), Gaps = 21/299 (7%) Query: 386 SKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQEY 444 K + + R+ K +K + + + R+ ++ + VD Y ++ VQ Sbjct: 70 KKKDIDFDFIKERILKAYRKRYRLLEK--TDAVRVVHSEADGLPGLIVDLYDRYLSVQI- 126 Query: 445 APPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQ-YQKLGEKGEFLEV 503 T + R+ + + GI K+RE++ K + G+ E + + Sbjct: 127 ---NTAGMERFRENIIKALIDIFEPEGIVEKSD-EKSREKEGLKTENKVVYGKVPESIVI 182 Query: 504 TEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSK-GKDFLNLFSYTGSATVHAGLGGAR 562 E ++ L TG +LD RI R ++ + K G L+LFS G ++AG+ GA+ Sbjct: 183 HENGVKFYIQLEKGQKTGFYLDQRINRFIVSEYIKEGDSVLDLFSNAGGFGIYAGIKGAK 242 Query: 563 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREAN---EQFDLIFIDPPTF 619 T VD+S+ + ++N LNG+ G + + + + +L ++ +++DLI +DPP+F Sbjct: 243 DITFVDISKNAVSLIDKNCELNGIKG--YTVYRENVFKFLTDSGSMDKRYDLIILDPPSF 300 Query: 620 SNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTI-MFSNNKRGFRMDLDGLAKLGLKAQE 677 + ++ + D R L+ +L GG + +FS + + LD L K L + Sbjct: 301 AKNR--YEVKDAIRGFKFLISRSLEILNDGGFLAVFSCSYH---VSLDDLKKTVLDVSK 354 >UniRef50_A9GP63 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GP63_SORC5 Length = 666 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 86/308 (27%), Positives = 136/308 (44%), Gaps = 17/308 (5%) Query: 399 LRKNLKKFEKWARQEGIECYRLYDADLPEYN-VAVDRYADWVVVQEYAPPKTIDAHKARQ 457 +R+ ++ AR RL V+VD Y + +VV + + R Sbjct: 278 MREAAERRYGIARAGDTTALRLVHGAGDGLPSVSVDLYGEHLVVSLFGAGEGEPGAPPRD 337 Query: 458 RLFDI---IAATISVLGIAPN--KLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWV 512 + D + A L P +++ R + + + E L V E+ V Sbjct: 338 LVLDAAHRLGAKGVYLKARPKHASVIVDARREEFAPRHAVRGEDAPEELTVLEHGLPFKV 397 Query: 513 NLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRT 572 L D L TG+FLD R RR + ++++G LNLF+YTG+ TV A GGAR + TVD+SR Sbjct: 398 RLGDGLSTGIFLDQRENRRRVRELARGARVLNLFAYTGAFTVAAVAGGARESVTVDVSRG 457 Query: 573 YLEWAERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAF 629 + WA NL G AH +++AD WL+ +++ +FDL+ +DPP+F+ +K+ F Sbjct: 458 VVAWARDNLAAIGADPAAHVVVEADVFPWLKAAAQSDRRFDLVVLDPPSFATTKKSR--F 515 Query: 630 DVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD------LDGLAKLGLKAQEITQKTL 683 D AL R+L GG ++ N RG + + G ++ Sbjct: 516 SAASDFGALAALAFRVLAPGGRLLACTNHRGIARARFRRHLHEAAREAGCDVVQMKDLPD 575 Query: 684 SQDFARNR 691 DF Sbjct: 576 PVDFPSEP 583 >UniRef50_A1AUW2 SAM-dependent methyltransferase n=10 Tax=Desulfuromonadales RepID=A1AUW2_PELPD Length = 409 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 95/326 (29%), Positives = 145/326 (44%), Gaps = 22/326 (6%) Query: 379 VAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYAD 437 VA + + A RL +L A + +RL +A+ + VD Y Sbjct: 63 VARVLSHERIRLDAAWIRRRLEASLTLRRDHADLGESDAFRLVNAEGDGLPGLTVDCYGQ 122 Query: 438 WVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKN--QYQKL- 494 +++VQ Y L +++ GI KTRE + ++ +Y +L Sbjct: 123 FLMVQLYCAGWRPHLKTLSGELMELLQ----PRGIYEKSRPQKTRELEAARDDKRYGRLL 178 Query: 495 --GEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSA 552 + L+V E V+L L+TGLFLD R RR L +GK LNLF+YTG+ Sbjct: 179 SGESAPQRLQVRENGLSFLVSLEQGLNTGLFLDQRRNRRDLMNRVEGKRVLNLFAYTGAF 238 Query: 553 TVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW---LREANEQF 609 +V A GAR T+VD+S YLEWA N +N L + H I DCLA L + + F Sbjct: 239 SVAAASAGAR-VTSVDVSAGYLEWARDNFGINRLNPKRHEFITGDCLAVLCQLAQKGQGF 297 Query: 610 DLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL---- 665 D+I +DPP+FS + + F + L+ LL GG ++ S+N + ++ Sbjct: 298 DVILMDPPSFSTTSKSR--FTTRGGTAELVAAALPLLADGGLLIASSNHQKLEVNDYLKE 355 Query: 666 --DGLAKLGLKAQEITQKTLSQDFAR 689 G G + + I+ +DF Sbjct: 356 LRRGALMAGCELRVISLSGQPEDFPY 381 >UniRef50_B5EPR2 Methyltransferase small n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EPR2_ACIF5 Length = 407 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 75/312 (24%), Positives = 119/312 (38%), Gaps = 16/312 (5%) Query: 378 HVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYA 436 + D + Y +RL++ L+ E+ G YRL + + +DRY Sbjct: 70 CARLLSRDPHVRIDEGFYRSRLQQALRMRERLF---GAPFYRLVHGEGDGLPGLVIDRYE 126 Query: 437 DWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGE 496 D +V+Q ++ + + + + GI R G Sbjct: 127 DHLVLQ----AGSLGMDRDLPLITAALQGLLRPAGILLKASGAARRLEGLEDRVEVLFGH 182 Query: 497 KGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHA 556 E LEV E + V+ TG F DHR RR L ++G+ L+ F+Y G + Sbjct: 183 IPERLEVWENDCLFQVDPRGGQKTGWFYDHRANRRRLRDFAQGRRVLDCFAYLGGFAIPL 242 Query: 557 GLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW---LREANEQFDLIF 613 GA + T VD S L E N R N + G I D + LR+ EQFDLI Sbjct: 243 AKAGASAVTAVDSSAPALAILEENARRNEVEGLHS--IHGDAMETLHNLRDRGEQFDLIV 300 Query: 614 IDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGL 673 +DPP SK+ + + RLL GG + ++ + L+++ Sbjct: 301 LDPPALIKSKKDFKEGSIA--YRRFNDMAMRLLTPGGILFSASCSHHLSRET-LLSQIAF 357 Query: 674 KAQEITQKTLSQ 685 AQ + + + Sbjct: 358 AAQRGDYQIIGE 369 >UniRef50_A6Q436 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q436_NITSB Length = 387 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 71/303 (23%), Positives = 137/303 (45%), Gaps = 25/303 (8%) Query: 386 SKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLP-EYNVAVDRYADWVVVQEY 444 S + A + R+++ L K YRL ++ + VD+Y +++ + Sbjct: 67 SNEPIDANFFKKRVQEALYKRLDI----PSNAYRLIHSEADMLPGLIVDKYEEYLSIHFV 122 Query: 445 APPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKL-GEKGEFLEV 503 + + + LF+I A + + + R++G+ ++K+ G E +E+ Sbjct: 123 TAGILLFQEEIVKTLFEITAPKGAYITAPESA------MRKEGEEPFEKMIGALPEHIEI 176 Query: 504 TEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGK-DFLNLFSYTGSATVHAGLGGAR 562 E V++ + TG +LD R R ++ + K K L+ FS +G ++A Sbjct: 177 EENGIRFVVDIKNSQKTGFYLDQRANRAIVTKFMKQKERMLDCFSNSGGFGLYAASKKGA 236 Query: 563 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQ---FDLIFIDPPTF 619 VD+S L A+ N RLNG+ G+ ++A+ +LRE ++ FD + +DPP+F Sbjct: 237 DVEIVDISSQALALAKSNFRLNGVVGK---FVEANVFDYLRELRKKKAKFDTVVLDPPSF 293 Query: 620 SNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTI-MFSNNKRGFRMDLDGLAKLGLKAQEI 678 + S+ + + + + +LL GG + +FS + +D+D L + LKA + Sbjct: 294 AKSRHQKGG--ALKGFKDISVNAMKLLDEGGKLALFSCSH---YVDMDDLVHIVLKAAKD 348 Query: 679 TQK 681 K Sbjct: 349 NHK 351 >UniRef50_C1ZEX7 Predicted SAM-dependent methyltransferase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZEX7_PLALI Length = 552 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 67/317 (21%), Positives = 124/317 (39%), Gaps = 25/317 (7%) Query: 385 DSKPAMVAEDYTNRLRKNLKKF-EKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQ 442 + ++L +K E ++ YRL A+ + VDRY D + V+ Sbjct: 199 RGDQIPDEAWWKSKLEAAVKFRTETLGLEQQGNVYRLVHAEGDGLPGLMVDRYGDVLSVE 258 Query: 443 EYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEK--GEF 500 + + ++ + + D++AA G L Q G + E Sbjct: 259 AF----NLGMYQRAESILDLLAAC---TGAKHGILRPGAYAAQLEGFDADPFGSENAPES 311 Query: 501 LEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGG 560 ++V E V D TG F D R R + +++ G+ L+L Y+G + A + G Sbjct: 312 VQVVENGVKYEVQFEDGHKTGFFCDQRQNRARVAELAAGQRVLDLCCYSGGFALSAAVSG 371 Query: 561 ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA---NEQFDLIFIDPP 617 A+S VD+ + A++N +LN + AD AW+REA +Q+D++ +DPP Sbjct: 372 AKSVHGVDLDEAAIAVAKKNAKLNKV---QIEWAHADIFAWMREAQKQGQQWDIVVLDPP 428 Query: 618 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL------DGLAKL 671 ++ +D D ++ + + + L+ GG ++ + + Sbjct: 429 KLIRTR--DDYEDGRKKYFDMNRLAASLVSPGGMLITCSCSGLLSSADFTRVTGYAIDNA 486 Query: 672 GLKAQEITQKTLSQDFA 688 G A+ Q D Sbjct: 487 GRSARLCEQTGAGPDHP 503 >UniRef50_A0LJE8 SAM-dependent methyltransferase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LJE8_SYNFM Length = 389 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 70/309 (22%), Positives = 121/309 (39%), Gaps = 12/309 (3%) Query: 359 ADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECY 418 + K+ G ++ +A ++ + L + ++ G C+ Sbjct: 43 SSKRVPLGRGYINPRSL---IAVRLVTGPGQEPTREFFSELLRRAEEKRTLLYYPGSTCH 99 Query: 419 RLYDADLPEY-NVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKL 477 R+ + + VDRY D +V+Q T+ + + + +++ I Sbjct: 100 RVVFGESDGIPGLIVDRYGDVLVIQ----VTTLGMARMQSLIQELMVELFRPAAIVCRND 155 Query: 478 VLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMS 537 R + GE E + V L V+ TGLFLD R RR L + Sbjct: 156 TSVRRLEGLPLEKGLAFGELPEDIRVNIDGLELRVDPLGGQKTGLFLDQRDNRRALLRWI 215 Query: 538 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQAD 597 GK L+LF YTG+ + A GGA VD S ++ A N N + R I+++ Sbjct: 216 GGKRVLDLFCYTGAWGLAAARGGASRVVGVDASAEAVDQARSNAAANNVADRC-EFIRSE 274 Query: 598 CLAWLREANE-QFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSN 656 L +LR + FD+I +DPP F+ +K + Q+ + L + L GG ++ + Sbjct: 275 ALQYLRTLRKGDFDVIVLDPPAFAKTKSALP--EAQKGYTDLNRRALLALAPGGLLVTCS 332 Query: 657 NKRGFRMDL 665 +L Sbjct: 333 CSYHMSEEL 341 Score = 44.1 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 25/55 (45%) Query: 257 HFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPP 311 G D+ A + +AR+NA + + F + Q L KG + ++ +PP Sbjct: 241 RVVGVDASAEAVDQARSNAAANNVADRCEFIRSEALQYLRTLRKGDFDVIVLDPP 295 >UniRef50_C9MRP3 Methyltransferase n=7 Tax=Prevotella RepID=C9MRP3_9BACT Length = 410 Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats. Identities = 72/344 (20%), Positives = 132/344 (38%), Gaps = 39/344 (11%) Query: 368 GPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFE--KWARQEGI-------ECY 418 G + ++H + E + +RL L+ RQ G Y Sbjct: 68 GSISVRVLSFH--------DIEIDDEFWESRLSAALQVRNAIGVIRQSGDVKEGYPNTTY 119 Query: 419 RLYDADLPE-YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKL 477 RL + + +D Y V+Q + ++ H R+ + A + V+G + + Sbjct: 120 RLVHGEGDNLPGLVIDVYGTTAVMQAH----SVGMHVCREVI---ARALVKVMGDQLDSI 172 Query: 478 VLKTRERQKGKNQYQK-----LGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRM 532 K+ K + G+ + + E ++ TG F+D R R + Sbjct: 173 YYKSETTLPFKADLGQENGFIYGQTDNNIAI-ENGLKFHIDWLKGQKTGFFIDQRENRSL 231 Query: 533 LGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHR 592 L ++G+ LN+F YTG +V+A GGA+ +VD S +E +N+ +N + H Sbjct: 232 LEYYAQGRSVLNMFCYTGGFSVYAMRGGAKCVHSVDSSAKAIELTNKNIEINFPDDKRHA 291 Query: 593 LIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTI 652 D +L + ++DLI +DPP F+ ++ + R + L +R+GG + Sbjct: 292 AFCEDAFKYLDDNEGKYDLIILDPPAFAKHRQALK--NGLRGYTRLNVKGFEKIRSGGIL 349 Query: 653 MFSNNKRGFRMD------LDGLAKLGLKAQEITQKTLSQDFARN 690 + + D A+ G K + + Q D N Sbjct: 350 FTFSCSQVVTKDNFRQAVFTAAAQAGRKVRILHQLHQPADHPIN 393 >UniRef50_Q2IKG3 SAM-dependent methyltransferase n=6 Tax=Cystobacterineae RepID=Q2IKG3_ANADE Length = 400 Score = 234 bits (598), Expect = 8e-60, Method: Composition-based stats. Identities = 74/317 (23%), Positives = 125/317 (39%), Gaps = 15/317 (4%) Query: 383 TPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVV 441 T + A+ A + R+ + + + R YR+ + V DRY VV+ Sbjct: 68 TREPAEAIDAAFWRRRVARAVALRRELVR--DTTGYRVVHGEGDALPGVVADRYDRHVVL 125 Query: 442 QEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFL 501 + Y+ T + + L V G + G + E E + Sbjct: 126 KLYSAGLTPHRAEIVEALHAEQEGVAGVFGRDEIPRDDQDEGEGGGSGRVLWGAEPPERI 185 Query: 502 EVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGK-DFLNLFSYTGSATVHAGLGG 560 + E+ + V++ TG FLD R RRM+ +++G+ + LNLF YTG +V A LGG Sbjct: 186 AIDEHGMKVLVDVRRGQKTGHFLDQRENRRMVRDLARGRAEALNLFGYTGGFSVAAALGG 245 Query: 561 ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL---REANEQFDLIFIDPP 617 A TVD+ R + A N R NGL H DC L + +FDL+ DPP Sbjct: 246 AGHVVTVDVDRDAIALARENFRANGLDAADHAFAAEDCFELLARYKREGRRFDLVVCDPP 305 Query: 618 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD------LDGLAKL 671 F+ S++ + + +L + +L GG ++ ++ + + K Sbjct: 306 AFAKSQKAVEG--ALAGYASLNRAALAVLAPGGLLVTASCSARVSAEQFADAVKEAAYKA 363 Query: 672 GLKAQEITQKTLSQDFA 688 + + + D Sbjct: 364 RVDLALVAETRQPPDHP 380 >UniRef50_C6IZE3 PUA domain-containing protein n=2 Tax=Bacillales RepID=C6IZE3_9BACL Length = 457 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 72/375 (19%), Positives = 134/375 (35%), Gaps = 82/375 (21%) Query: 386 SKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLP-EYNVAVDRYADWVVVQEY 444 AM + R ++ LK E++ ++ + YR + + VD++ D +VVQ Sbjct: 69 PLEAMDTAFFVRRFQECLKHRERFVKE---DAYRFVYGEADFLPGLIVDKFGDVLVVQLL 125 Query: 445 APPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVT 504 T+ + R+++ + ++ + +GI V + + G+ + V+ Sbjct: 126 ----TLGMDRCREQIVEALSEVLHPVGIYERSDVAVREMEGLEQVKGPIFGQPPRHVIVS 181 Query: 505 EYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKG------------------------- 539 E + V++ TG F D R R + + G Sbjct: 182 ENGLKIEVDIEQGQKTGYFFDQRENRASIKPLMTGWGGRSGITLQELPTEDGGVRLAPVN 241 Query: 540 -------------KDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGL 586 L FS+TGS T+HA GA+ T +D+S +E A+RN+ LNG Sbjct: 242 RNGKEVTFPYWDGATVLECFSHTGSFTLHACKYGAKKVTCLDISEHAIESAKRNVELNGF 301 Query: 587 TGRAHRLIQADCLAWLREA---------------------------NEQFDLIFIDPPTF 619 T R + AD +LR +D++ +DPP F Sbjct: 302 TDRV-EFVVADAFDYLRSQVKGLEERARRAAQDAKVDTSVPLTAGGGRTWDVVILDPPAF 360 Query: 620 SNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD------LDGLAKLGL 673 + +K R + + +L+ GG ++ ++ R D L+ G Sbjct: 361 AKTKAA--VKGAVRGYKDINLHGMKLVNEGGYLVTASCSYHMRPDLFLETILEAAEDAGK 418 Query: 674 KAQEITQKTLSQDFA 688 + + + +D Sbjct: 419 VLRLVEWRAAGKDHP 433 >UniRef50_A7HKL6 PUA domain containing protein n=9 Tax=Thermotogaceae RepID=A7HKL6_FERNB Length = 394 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 64/301 (21%), Positives = 126/301 (41%), Gaps = 18/301 (5%) Query: 384 PDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQ 442 + E +R+ LK ++ + YR+ + + VD++ D++ VQ Sbjct: 68 SRKPIEINKEFIKSRINDALKNRYNIVKE---DAYRVVFGEADGLPGLIVDKFGDYLSVQ 124 Query: 443 EYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLE 502 T+ +K + + D++ + GI ++ + G E + Sbjct: 125 F----NTLGINKLKNHIIDVLLENFNPKGIFERTEGSAVKKEGLEEKTEWIYGNGPELIP 180 Query: 503 VTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGAR 562 + T TG FLD R + L + ++GK+ L+ FSYTG+ +H GGA+ Sbjct: 181 FEINGLKFLAD-TKGQKTGAFLDQRENAKKLMEFAEGKECLDCFSYTGNFGMHLLKGGAK 239 Query: 563 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQ---FDLIFIDPPTF 619 T VD S ++ A+ +LN + + I A+ +L+E E +D++ +DPP+F Sbjct: 240 HVTFVDYSERAIDVAKEIAKLNNF--QNCKFIVANAFDFLKEEFENSHLYDIVVLDPPSF 297 Query: 620 SNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD--LDGLAKLGLKAQE 677 + S DA + + + ++L+ G + ++ + D + G+ A+ Sbjct: 298 AKSASSRDA--AFKGYKEINYRSMKILKNNGILATASCTQVVSQKEFEDIIVDAGIDAKV 355 Query: 678 I 678 I Sbjct: 356 I 356 >UniRef50_C7RKQ3 PUA domain containing protein n=3 Tax=Proteobacteria RepID=C7RKQ3_9PROT Length = 396 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 76/316 (24%), Positives = 118/316 (37%), Gaps = 18/316 (5%) Query: 385 DSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQE 443 D + + + + + + G + RL + + VDRY D +VVQ Sbjct: 68 DPDEIIDDVFFKRHVHAAVARRQAMPDLRGQDGLRLIHGESDGLPGLIVDRYGDTLVVQL 127 Query: 444 YAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKG-EFLE 502 A K R+ + + I R GE E L Sbjct: 128 TAT----GPEKWRRAILAALREASGCARIYERSDSDVRRLEGLEPVTGWVFGEAPAEPLV 183 Query: 503 VTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGAR 562 + E + V++ TG +LD R R + +++ G+ LN F YTG ++ A GGA Sbjct: 184 IVENGVRIGVDVVAGHKTGFYLDQRDNRLLTRELAGGRTVLNCFCYTGGFSLQALAGGAT 243 Query: 563 STTTVDMSRTYLEWAERNLRLN-GLTGRAHRLIQADCLA---WLREANEQFDLIFIDPPT 618 S ++D S L A NL N L QAD + L+ A +FDLI +DPP Sbjct: 244 SVLSIDSSGPALSTAVDNLARNPELAADRAEWRQADVFSELRVLKSAGHRFDLIILDPPK 303 Query: 619 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL------DGLAKLG 672 F+ S + A R + + RLL GG +M + G R + D G Sbjct: 304 FAPS--AQHAERAARAYRDINVCAFRLLNPGGLLMTYSCSGGIRSEHFQQIVTDAAIDAG 361 Query: 673 LKAQEITQKTLSQDFA 688 + + + + D Sbjct: 362 QQTRLLHRLAAPADHP 377 >UniRef50_D2QFB5 Methyltransferase n=14 Tax=Bacteria RepID=D2QFB5_9SPHI Length = 398 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 65/336 (19%), Positives = 127/336 (37%), Gaps = 26/336 (7%) Query: 366 KNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADL 425 +G + +++ P + +R K CYRL + Sbjct: 57 HDGSIAVRIFSFNATAGGPVTPDLPYWTKKLAHIR----SIRKVIVTGETNCYRLVHGEG 112 Query: 426 PE-YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRER 484 + +D Y +V+Q + +I H+ R+ + D + V G + K+ E Sbjct: 113 DGCTGLILDMYNGVIVLQAH----SIGMHREREIITDALKV---VFGDELKAVYDKSAET 165 Query: 485 QKGKNQYQK-----LGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKG 539 + G V E ++ TG FLD R R +L Q ++G Sbjct: 166 LPDEYGATVTNGYLYGRTPVPHPVLENGNTFMIDWITGQKTGFFLDQRDNRALLAQYAEG 225 Query: 540 KDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLN-GLTGRAHRLIQADC 598 K LN F Y+G +V+ GA +VD+S+ + E+N+ N G + H+ D Sbjct: 226 KKVLNAFCYSGGFSVYGLKAGATLVHSVDVSQKAITLTEQNITANFGESDDRHQAFAEDV 285 Query: 599 LAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 658 + +L+ ++Q+D++ +DPP F+ S+ + + L + + + GG + + Sbjct: 286 MHYLKNHDQQYDVVVLDPPAFAKSQSAR--HRAVQGYKRLNAEGFKRVAKGGLLFTFSCS 343 Query: 659 RGFRMDL------DGLAKLGLKAQEITQKTLSQDFA 688 + +L + G + + + + D Sbjct: 344 QVVDRELFYNTIVAAAIEAGRQVRVLHHLSQPADHP 379 >UniRef50_Q7MSX4 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MSX4_WOLSU Length = 391 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 77/294 (26%), Positives = 130/294 (44%), Gaps = 15/294 (5%) Query: 386 SKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQEY 444 ++ + E+ RL+K + K E + RL ++ E + VD YA+ + +Q Sbjct: 68 TQKSFTPEELKKRLQKAILKRESLLLK--TNGARLIHSESDELPGLIVDSYANHLSLQI- 124 Query: 445 APPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVT 504 T + R + + + +S L I + + GE + + + Sbjct: 125 ---NTAGMERFRPLILESLKELLSPLSIIDKSDEKSRQLEGLESSNGVIFGEVPQEILLQ 181 Query: 505 EYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARST 564 E A +NL + TG +LD R R +L +M+KGK L+LF G +HA L GA+ Sbjct: 182 EEGARFGINLLEGQKTGYYLDQRQNRLLLAEMAKGKRVLDLFCNGGGFGIHALLKGAKEA 241 Query: 565 TTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA---WLREANEQFDLIFIDPPTFSN 621 +D S E ++NL LN L + R+I A+ LRE E+FDLI +DPP+F+ Sbjct: 242 LFIDSSEMACEQVKKNLSLNQLENKG-RIISANVFDELKGLREREEKFDLIILDPPSFAK 300 Query: 622 SKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKA 675 +K + L+ ++ I + + M L+ LA++ L+A Sbjct: 301 TKEQQKG--AMNGWKYLIIGAIKVAAPKARIALYSCS--YHMGLNELAQVALEA 350 >UniRef50_B2V9T0 Methyltransferase small n=4 Tax=Bacteria RepID=B2V9T0_SULSY Length = 388 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 74/317 (23%), Positives = 131/317 (41%), Gaps = 20/317 (6%) Query: 386 SKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQEY 444 + + ++ K K ++ + RL A+ + VD Y ++ +Q Sbjct: 69 EDVQVNEDFIKEKIEKAFDKRKELLK--ITNAIRLIHAEADGLPGLIVDYYDGYLSLQI- 125 Query: 445 APPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKL-GEKGEFLEV 503 T + R+ + + I GI K RE++ + + + L GE E + + Sbjct: 126 ---NTYGMERLRENILKSLIDIIKPKGIIEKSD-EKAREKEGLQTEKKVLFGEVLEKILI 181 Query: 504 TEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSK-GKDFLNLFSYTGSATVHAGLGGAR 562 EY+ V+L + TG +LD R R++ + K G L+LF G +H G GA Sbjct: 182 FEYDVKFLVSLQESQKTGFYLDQRANRKLTSEYVKEGFKVLDLFCNAGGFGIHGGKKGAE 241 Query: 563 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNS 622 VD+S L E N RLN L + + +++ D +L++ +++DLI +DPP F+ S Sbjct: 242 FIKFVDISSFALSQVEENARLNNL--KNYEIVKDDVFDFLKKEKDKYDLIILDPPPFAKS 299 Query: 623 KRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL------DGLAKLGLKAQ 676 K + D R L+ + +LL G + + + ++ D L A+ Sbjct: 300 KNEK--HDALRGFKYLILNSLKLLNQNGYLAIFSCSQNITLEDLINTTYDSLKDTKNMAE 357 Query: 677 EITQKTLSQDFARNRQI 693 T +D I Sbjct: 358 FALFFTQDKDHPYILNI 374 >UniRef50_Q025J5 SAM-dependent methyltransferase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q025J5_SOLUE Length = 387 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 70/306 (22%), Positives = 111/306 (36%), Gaps = 21/306 (6%) Query: 384 PDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQ 442 + + Y +RLR + + YR+ + + VDRY D++V+Q Sbjct: 65 SRQIEEIGRDFYLHRLRAAEQHRRTVVH--DSDAYRVVHGEADLLPALVVDRYGDYLVMQ 122 Query: 443 EYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLE 502 A+ + + GI V + + G+ E + Sbjct: 123 TL----DQGMDAAKAEIASCLEEIFRPKGIVARNDVSVRTKEELPLESGIVAGDVPESVT 178 Query: 503 VTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGAR 562 V L +L TG+FLD R R Q ++G L+ F+ TG +H Sbjct: 179 VRMNGLTLRADLLHGQKTGIFLDQRQNYRAAAQYARGGRALDCFTSTGGFALHLAPK-CE 237 Query: 563 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL---REANEQFDLIFIDPPTF 619 VD S LE A N NG+ +AD L A QF ++ +DPP F Sbjct: 238 HVEAVDSSGPALEAARANSTANGIDN--IDWNEADVFDLLSGYANARRQFSMVVLDPPAF 295 Query: 620 SNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD--LDGLAKLGLKAQE 677 + +KR D + + RLL+ GG ++ + L+ +A GL Sbjct: 296 AKNKRSLD--PAISAYKEINLRAMRLLQPGGILVTCSCSHHLSEASLLELVAGAGLD--- 350 Query: 678 ITQKTL 683 T +TL Sbjct: 351 -THRTL 355 >UniRef50_B5YL48 Methyltransferase small domain family n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YL48_THEYD Length = 386 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 74/304 (24%), Positives = 131/304 (43%), Gaps = 25/304 (8%) Query: 386 SKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLP-EYNVAVDRYADWVVVQEY 444 + R++K+ K E + + E YRL ++ + VD+Y +V+Q Sbjct: 65 GDEQINKNFLRERIQKSHKYREDFLGLK--ESYRLIFSESDFLPGLIVDKYGKCLVIQIL 122 Query: 445 APPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRE--RQKGKNQYQKL---GEKGE 499 +RL D+I + L + P ++L+ R K + +K+ G Sbjct: 123 TAG--------MERLKDLIVEILDKL-LVPEVIILRNDAQPRVKEGLKVEKMVIKGCVDN 173 Query: 500 FLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLG 559 + E + + + TG FLD R R L + + L+LF Y G+ ++H Sbjct: 174 LIMTKEDDLKFYFDPLHGQKTGFFLDQRENRLYLKSLISSGEGLDLFCYVGAWSIHLAKR 233 Query: 560 GARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDP 616 GA T +D S +E A++N LN + + R I+AD +LR + +++D I +DP Sbjct: 234 GAN-ITGIDSSEKAIEIAKQNAMLNNVQDKC-RFIKADVFDYLRWEAKKGKKYDFIVVDP 291 Query: 617 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRM-DLDGLAKLGLKA 675 P F S++ + D ++ L + +LLR G + S+ + D + K KA Sbjct: 292 PAFVKSRQEKK--DAIEGYVNLNRMALKLLRKNGILATSSCSQHISETDFLEIIKKTFKA 349 Query: 676 QEIT 679 + T Sbjct: 350 SKKT 353 Score = 42.2 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Query: 251 LAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK--GPYGTVLS 308 LA+ ++ G DS + I+ A+ NA L + + F DV K Y ++ Sbjct: 230 LAKRGANITGIDSSEKAIEIAKQNAMLNNVQDKCRFIKADVFDYLRWEAKKGKKYDFIVV 289 Query: 309 NPP 311 +PP Sbjct: 290 DPP 292 >UniRef50_B3DWI3 SAM-dependent methyltransferase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DWI3_METI4 Length = 399 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 65/271 (23%), Positives = 110/271 (40%), Gaps = 13/271 (4%) Query: 399 LRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQEYAPPKTIDAHKARQ 457 L K K EK + YRL+ ++ + +D+YADW VVQ A + R Sbjct: 89 LSKAFKYREKLFSGKDSNAYRLFWSESDGLPGLIIDKYADWYVVQFLTS----GADRKRN 144 Query: 458 RLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDY 517 + +++ I + + V + V+L + Sbjct: 145 EILEVLKGITQSTNIILRNDAPVRLLEGLSLTKESLKEDFPCRHLVCMEGIPILVDLYNG 204 Query: 518 LDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWA 577 TGL+LD + + Q++KGK L+ FSY G ++ GGA+ VD S ++ Sbjct: 205 QKTGLYLDQAANYKFISQIAKGKRVLDCFSYQGLFSIFCARGGAQCCVAVDQSAAAIDIG 264 Query: 578 ERNLRLNGLTGRAHRLIQADCLAWLRE---ANEQFDLIFIDPPTFSNSKRMEDAFDVQRD 634 + N GL + + WLR+ E+FDLI +DPP+F+ +K +++ R Sbjct: 265 KENASQLGL---QIEWVCENAFDWLRKKEREKEKFDLIILDPPSFTKTKVQKES--AFRG 319 Query: 635 HLALMKDLKRLLRAGGTIMFSNNKRGFRMDL 665 + + RLL +GG + M+ Sbjct: 320 YHEIHLRALRLLDSGGFLASFCCSHHITMEE 350 >UniRef50_B2UN28 Putative SAM-dependent methyltransferase n=3 Tax=Verrucomicrobia RepID=B2UN28_AKKM8 Length = 394 Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 66/342 (19%), Positives = 136/342 (39%), Gaps = 24/342 (7%) Query: 345 FSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLK 404 +P + L+ K + + + VA K + + ++ R+ + ++ Sbjct: 27 IFGNPQPGDVVALKDFKDRFLGSAMFNPH--SQIVARRFSRRKQELNGDFFSRRISQAVE 84 Query: 405 KFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDII 463 + +E + RL ++ + VDRYAD++VVQ TI + +++ Sbjct: 85 LRRRRLPEETLT--RLVWSESDGLPGLIVDRYADYLVVQTL----TIAMECRLPIILNVL 138 Query: 464 AATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLF 523 +S GI + G++ E + ++L TGL+ Sbjct: 139 EDLLSPRGIIVRNDSPMLAAEGISPSVRVARGQQPEPFAARSGSVQFMIDLQTGQKTGLY 198 Query: 524 LDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRL 583 LD + + ++G+ L+ F G + L GA T VD+S+ ++ RN RL Sbjct: 199 LDQLDNYAAVARFARGRRVLDCFCNQGGFALACALAGASEVTAVDVSQDAMDAVARNARL 258 Query: 584 NGLTGRAHRLIQADCLAWLREA--------NEQFDLIFIDPPTFSNSKRMEDAFDVQRDH 635 NG++ + + + +L++ ++DLI +DPP+F+ +K+ D R + Sbjct: 259 NGVSVQC---VTDNAFDFLKKEAALVRDGGEHKWDLIILDPPSFTRNKK--SVHDAMRGY 313 Query: 636 LALMKDLKRLLRAGGTI--MFSNNKRGFRMDLDGLAKLGLKA 675 + +LL GG + ++ G + + + + A Sbjct: 314 KEIHLRAMKLLAPGGILSTFCCSHHAGADLFRESVLDAAIDA 355 >UniRef50_C6NWD6 LSU m5C1962 methyltransferase RlmI n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NWD6_9GAMM Length = 432 Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats. Identities = 81/317 (25%), Positives = 118/317 (37%), Gaps = 15/317 (4%) Query: 383 TPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVV 441 T D + + Y RLR L YRL + + VDRY D++V+ Sbjct: 73 TRDPDTQIDVDFYLRRLRDALGLRMALFSGPY---YRLVHGEGDGLPGLVVDRYGDYLVL 129 Query: 442 QEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFL 501 Q + D + + I LGI + + G E L Sbjct: 130 QTGSAGMEQDLDL----IVAALVELIRPLGILLKGSGVARSIEGLPERIEVLAGAVPEHL 185 Query: 502 EVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGA 561 EV E ++ TG F DHR R L + + G+ L+LFSY G + GA Sbjct: 186 EVLENGCSFLIDPRQGQKTGWFYDHRRNRHELTKFATGRRVLDLFSYLGGFALPLARAGA 245 Query: 562 RSTTTVDMSRTYLEWAERNLRLNGLTG-RAHRLIQADCLAWLREANEQFDLIFIDPPTFS 620 VD S + L E N R NGL+ H + L LR+ E FDLI +DPP Sbjct: 246 VEVLAVDRSASALALLEENARRNGLSQVHGHEGEALETLRQLRDRAESFDLILLDPPALI 305 Query: 621 NSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD--LDGLAKLGLKA--Q 676 S++ D D + L RLLR G + ++ D L +A+ + + Sbjct: 306 KSRK--DVRDGTAAYARLNDLALRLLRPDGLLFTASCSYHLSRDALLQAVARGASRGSYR 363 Query: 677 EITQKTLSQDFARNRQI 693 +T+ D + Sbjct: 364 VLTEAGQDLDHPYPPAV 380 >UniRef50_D2QYD2 Putative uncharacterized protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QYD2_9PLAN Length = 428 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 63/276 (22%), Positives = 116/276 (42%), Gaps = 16/276 (5%) Query: 388 PAMVAEDYTNRLRKNLKKFEKWAR-QEGIECYRLYDADLPE-YNVAVDRYADWVVVQEYA 445 + + L+ ++ + E YR+ A+ + VDR+ + + ++ Sbjct: 91 ELPDDQFWDELLKSAVQLRRDVLKLDEVTNSYRVIHAEADGLPGLVVDRHGSVLSAEAFS 150 Query: 446 PPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTE 505 A + +RL ++ ++L +P L ++ + + G + + E Sbjct: 151 LAMYQRAPEILERLSKLLGTEQTILRTSPASL-----AQEGFEAEPVITGTMPSRVVIEE 205 Query: 506 YNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHA-GLGGARST 564 + V+ + TG F D R R+ L K K L+L YTG V A LGGA Sbjct: 206 FGTRFKVDFAEGHKTGFFCDQRENRKQLASFCKDKTVLDLCCYTGGFAVQAKKLGGASEV 265 Query: 565 TTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE---ANEQFDLIFIDPPTFSN 621 VD+ L+ A+ N LN + R +QAD A++R+ + +FD++ +DPP Sbjct: 266 IGVDLDEEPLKLAKENANLNQV---RCRFVQADAFAYMRDMQSSGRKFDVVVLDPPKLIR 322 Query: 622 SKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 657 S+ + + R H AL + +L+ GG ++ Sbjct: 323 SRAEIE--EGTRKHFALNRLAMQLVAPGGVMLSCTC 356 >UniRef50_A4S9U5 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S9U5_OSTLU Length = 493 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 64/284 (22%), Positives = 122/284 (42%), Gaps = 20/284 (7%) Query: 398 RLRKNLKKFEKW--ARQEGIECYRLYDADLPEY-NVAVDRYADWVVVQEYAPPKTIDAHK 454 R+R+ + E CYRL +++ + + D Y + VV A Sbjct: 163 RIREAYELRRDLGLVGNERTTCYRLLNSEGDKISGLNADVYGEIVVASSTAAWVEQRRDV 222 Query: 455 ARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQ--------KLGEK-GEFLEVTE 505 + D++ A V+ K+ +G+N K+GE ++V E Sbjct: 223 ILRAFADVLGANTKVVWRRDEKMYEVEGTPWEGENLIDYYDAATGAKVGEAVPSDVKVLE 282 Query: 506 YNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTT 565 +++ TG ++D R R+++ ++++GK L++ YTG ++A LGGA Sbjct: 283 DGVQYAIDIAGGHKTGFYVDQRDNRKVMREIARGKRVLDVCCYTGGFALNAALGGASDVV 342 Query: 566 TVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANE-----QFDLIFIDPPTFS 620 VD S + L+ A++N LNGL + ++AD +++ + +D++ +DPP F+ Sbjct: 343 AVDSSESALDMAKKNAELNGLQDKV-NFVRADAFDFMQAEIDAGRAGSYDVVVLDPPKFA 401 Query: 621 NSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD 664 +K ++ L K LLR GG ++ + + Sbjct: 402 PTKPALK--KAIPKYVGLNKRAMTLLRPGGILITCSCSGAVTQE 443 >UniRef50_Q11NR8 SAM-dependent methyltransferase n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11NR8_CYTH3 Length = 393 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 76/313 (24%), Positives = 125/313 (39%), Gaps = 16/313 (5%) Query: 386 SKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEY-NVAVDRYADWVVVQEY 444 ++ + + +L+ + + YRL A+ + + D YAD VV+Q Sbjct: 72 TEEVLTENYWAVKLKNAFALRQTVIQFGKTNVYRLLHAEGDFFPGIIADVYADVVVLQVL 131 Query: 445 APPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVT 504 ++ L +I I + + ++ R G E + V Sbjct: 132 IRGVEKIVPAIQKALVEIGFKHIYIKAKTSSTVLEDIRT---GSGWLLGGVEVP--VIVK 186 Query: 505 EYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARST 564 E + V+ D TG F+D R R +L SKGK LN F YTG +V+A GGA Sbjct: 187 ENDVLFEVDFIDGQKTGFFVDQRENRELLRSYSKGKKVLNTFCYTGGFSVYAASGGAEVV 246 Query: 565 TTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE-ANEQFDLIFIDPPTFSNSK 623 +VD+S+ + A +N+ LN G H I ADC +L + + +D+I +DPP F+ S Sbjct: 247 DSVDISKEAVALAGKNMELN-YPGYKHGTIAADCFDFLGDIEKDYYDIIVLDPPAFAKSA 305 Query: 624 RMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL------DGLAKLGLKAQE 677 + + R + + R ++ GG + + + DL A + Sbjct: 306 KA--VANACRGYKQINLKAFRKIKKGGLLFTYSCSQNIDKDLFQKIVFGAAADSYRNVRI 363 Query: 678 ITQKTLSQDFARN 690 I Q D N Sbjct: 364 IHQMHQPADHPIN 376 >UniRef50_Q2VZ09 Predicted SAM-dependent methyltransferase n=6 Tax=Alphaproteobacteria RepID=Q2VZ09_MAGSA Length = 820 Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 63/283 (22%), Positives = 111/283 (39%), Gaps = 10/283 (3%) Query: 383 TPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLP-EYNVAVDRYADWVVV 441 + + + + RLR L + YRL ++ + VDRY D + V Sbjct: 498 SRRAADTVDVDFLAERLRAALALRDTLFPTPH---YRLVHSEADRLPGLIVDRYGDVLAV 554 Query: 442 QEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFL 501 Q T + L D + ++ + + + G+ + Sbjct: 555 QT----NTAGMERLLPVLLDALQMVLAPRAVVLVNDSPVRKLEGLEPHHDVAFGQVDGPV 610 Query: 502 EVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGA 561 E+ E +LT TG F D R R + +++KG+ L+L++Y G V A GA Sbjct: 611 ELEENGCRFVADLTGGQKTGWFFDQRDNRAFVARLAKGRRVLDLYTYAGGFAVQAAKAGA 670 Query: 562 RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSN 621 T VD S L A++ RLNG+ + R + L A E+F L+ DPP F Sbjct: 671 TQTIAVDRSEHSLALADQAARLNGVEVQTVRAEAFAEMERLALAGERFGLVVADPPAFVK 730 Query: 622 SKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD 664 S++ A + + + + L+ GG ++ ++ ++ Sbjct: 731 SRKDLGA--GAKGYRKMARLAAALVEPGGFLLCASCSHHMPVE 771 >UniRef50_Q31EI2 SAM-dependent methyltransferase n=17 Tax=Gammaproteobacteria RepID=Q31EI2_THICR Length = 398 Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats. Identities = 69/308 (22%), Positives = 119/308 (38%), Gaps = 23/308 (7%) Query: 397 NRLRKNLKKFEKWARQEGIEC--YRLYDADLPE-YNVAVDRYADWVVVQEYAPPKTIDAH 453 L+K ++ + R+ + YRL + + +DR+ D V Q Sbjct: 81 AFLKKRIQAAQA-LREANFDAPFYRLVFGESDGLPGLVIDRFGDVFVAQITTAGMETLKE 139 Query: 454 KARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQY-----QKLGEKGEFLEVTEYNA 508 + Q + ++ P LVL+ + +G E + + E A Sbjct: 140 ELVQTIENL---------YHPQALVLRNDSPSRELEGLSLYTEVAIGPLPEEIVIEENGA 190 Query: 509 HLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVD 568 + + TG F DHR+AR L K K L++FSY G + A + GA+ T VD Sbjct: 191 KFAIPTENGQKTGWFYDHRMARGRLQDFVKDKTVLDVFSYLGGWGIEAAVAGAKEVTCVD 250 Query: 569 MSRTYLEWAERNLRLNGLTGRAHRLI--QADCLAWLREANEQFDLIFIDPPTFSNSKRME 626 S L+ +RN LNG+ + + D L L ++D++ +DPP F K+ Sbjct: 251 ASTFALDGVDRNAELNGVAEKVITIEGNAFDVLKALATEAHKYDVVIVDPPAFVKRKK-- 308 Query: 627 DAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQD 686 D + + + RLL G ++ ++ D L ++ L ++ I + D Sbjct: 309 DFKAGADGYRRINELAMRLLNPDGILVSASCSHHMSRD-ALLQQIQLASRHIDRNIQMFD 367 Query: 687 FARNRQIH 694 H Sbjct: 368 QGHQGPDH 375 >UniRef50_Q39XD7 SAM-dependent methyltransferase n=4 Tax=Desulfuromonadales RepID=Q39XD7_GEOMG Length = 397 Score = 227 bits (580), Expect = 9e-58, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 122/319 (38%), Gaps = 17/319 (5%) Query: 379 VAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLP-EYNVAVDRYAD 437 V + + + + R+ + LK +R+ + + VD+Y D Sbjct: 68 VRLLSREREEIDSPAFFKERINQALKLRRSLYPDMAT--FRVVHGEGDFLPGLVVDKYGD 125 Query: 438 WVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEK 497 + VQ R + + + + GI V + E Sbjct: 126 RLSVQILTA----GIEARRGAIVEALVELFAPKGIIARNDVAVRSLEGLAETVEILYREI 181 Query: 498 GEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAG 557 E +E E+ V+L TG FLD + +L M+ GK L+ FSY+GS VHA Sbjct: 182 PETVEAEEHGLRFRVDLAGGQKTGHFLDQKENHLVLKGMAAGKRVLDCFSYSGSWGVHAA 241 Query: 558 LGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQA--DCLAWLREANEQFDLIFID 615 GA T +D+S A N LNGL G + D L LR +FD++ +D Sbjct: 242 AFGAAEVTCLDISERAAALARENAALNGLEGVVSVEVCDAFDRLRSLRHEGRRFDVVVLD 301 Query: 616 PPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL------DGLA 669 PP F +K+ + ++ +L + + LL AGG ++ + +L Sbjct: 302 PPAFVKNKKALK--EAEKGYLTINRRGLELLDAGGYLITCSCSYHMGRELFRDLLAQAAR 359 Query: 670 KLGLKAQEITQKTLSQDFA 688 + G + + + ++ + D Sbjct: 360 QAGRQVRIVETRSQAPDHP 378 >UniRef50_Q1D252 Putative uncharacterized protein n=3 Tax=Cystobacterineae RepID=Q1D252_MYXXD Length = 328 Score = 227 bits (580), Expect = 9e-58, Method: Composition-based stats. Identities = 80/319 (25%), Positives = 126/319 (39%), Gaps = 28/319 (8%) Query: 399 LRKNLKKFEKWARQEGIECYRLYDADLPEYN-VAVDRYADWVVVQEYAPPKTIDAHKARQ 457 LR + + +R+ +A+ V D + D V+ Y + Sbjct: 12 LRASRGRRGPLLGDARTTAWRVVNAEADGVPDVTADVFGDVYVISLYRDFTP----DEEE 67 Query: 458 RLFDIIAATISVLGI-----APNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWV 512 L D A + + VL ++ + GE E E + Sbjct: 68 TLLDAAVAAWAPRSLYLKRRPREARVLANVAKESLAPEAPARGEAVESFTALENGLTFLI 127 Query: 513 NLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRT 572 L GL+LD R R L ++G LNLFSYT + V A GGA+ +D SR Sbjct: 128 RPAQGLSVGLYLDMRDTRAWLLSQARGLTVLNLFSYTCAFGVVAMAGGAKRALNLDASRR 187 Query: 573 YLEWAERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAF 629 LEW E N RLNG T + + D WL+ + E FD++ DPP+FS ++ F Sbjct: 188 VLEWGEENARLNGQTVDRYDYVAGDVFDWLKRLAKKGESFDIVISDPPSFSTTRS--GRF 245 Query: 630 DVQRDHLALMKDLKRLLRAGGTIMFSNNK-----RGFR-MDLDGLAKLGLKAQEITQ-KT 682 RD+ L + R++ GG ++ N R F M L+G+++ G + + + Sbjct: 246 SAARDYARLAEAAARVVSPGGQLVACCNHAGLAARRFEAMVLEGVSQAGRQGKSLGSLAP 305 Query: 683 LSQDFARNR------QIHN 695 + DF ++H Sbjct: 306 SALDFPPPPGQEPALKVHR 324 >UniRef50_A9E6J8 Putative uncharacterized protein n=5 Tax=Bacteroidetes RepID=A9E6J8_9FLAO Length = 430 Score = 227 bits (580), Expect = 9e-58, Method: Composition-based stats. Identities = 79/316 (25%), Positives = 144/316 (45%), Gaps = 21/316 (6%) Query: 360 DKQYKAKNGPLDCVQKN----YHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGI 415 +++ K L C + + + + +E +++++R+ K + + Sbjct: 80 NRKNKF----LACGFYDPTSPIRIKILQANKPANINSEWFSDKVREAYNKRIPLLKTD-T 134 Query: 416 ECYRLYDAD---LPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGI 472 YRL + LP ++ D Y + +VV+ YA + +I A +VL + Sbjct: 135 NSYRLIYGENDNLP--SLVADVYDNVLVVKLYASFWFYHLKDILPEIINISKAATTVLRL 192 Query: 473 APNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRM 532 + + T E Q + E + E++ + N+ TG FLDHR RR Sbjct: 193 S-RNVQKDTNEFGFYDGQILTGELQSEVIIFKEHSVNFSANVIHGHKTGYFLDHRENRRK 251 Query: 533 LGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHR 592 +G++SK K L++FSY G +VHA +GGA T++D+S LE A+ N +LN +G+ H Sbjct: 252 VGKLSKNKTVLDVFSYAGGFSVHALVGGATEVTSLDISAPALEIAKSNAKLNEFSGK-HN 310 Query: 593 LIQADCLA---WLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAG 649 +I D L +A ++FD++ IDPP+F+ S D + L + +L+ Sbjct: 311 IIVGDAFEELNHLAKAKQKFDIVVIDPPSFAKSATEVD--RALASYKKLTQLGLQLVERK 368 Query: 650 GTIMFSNNKRGFRMDL 665 G ++ ++ D+ Sbjct: 369 GILVLASCSSRVTSDV 384 >UniRef50_B3QNQ6 PUA domain containing protein n=12 Tax=Chlorobiaceae RepID=B3QNQ6_CHLP8 Length = 394 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 69/325 (21%), Positives = 135/325 (41%), Gaps = 29/325 (8%) Query: 380 AESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADW 438 + E + N++R+ LK EK + +RL + + +DR+ Sbjct: 62 FRLLTRDETQPDREFFRNKIREALKLREKIYPESETNAWRLVHGESDGLPGLVIDRFDKA 121 Query: 439 VVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTR---ERQKGKNQYQKL- 494 V+Q ++ + +++ P +VL+ +G Y+++ Sbjct: 122 FVLQSFSA----GMENHLPIITEVLRELFD-----PKAIVLRNESPLRELEGLPLYKEML 172 Query: 495 --GEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSA 552 E + + + VN+ + TG FLD R RR + + + D L++++ G Sbjct: 173 LGDENDAWQVINDDGISYRVNILEGQKTGFFLDQRENRRHIRKYAADADVLDVYTNDGGF 232 Query: 553 TVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA---WLREANEQF 609 ++A GARSTT VD+S+ L+ AE+N R+NGL ++ D A LR+ N + Sbjct: 233 ALNAMHAGARSTTMVDISQDALQRAEQNARMNGLE--KFSIVADDAFATLGRLRQENRSY 290 Query: 610 DLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL---- 665 DL+ +DPP+F+ S++ + + L + +L++ G + ++ + Sbjct: 291 DLVILDPPSFTKSRKTVPT--ALKAYTKLNRLGLQLVKNEGFLATASCSHHVSEEDFLAA 348 Query: 666 --DGLAKLGLKAQEITQKTLSQDFA 688 G G + I++ D Sbjct: 349 VQLGALHAGKHLRLISRNAQPPDHP 373 >UniRef50_C0ZB58 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=C0ZB58_BREBN Length = 431 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 67/337 (19%), Positives = 133/337 (39%), Gaps = 52/337 (15%) Query: 385 DSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLP-EYNVAVDRYADWVVVQE 443 D K + + + ++++ + ++ + R+ + + VDRY D +VVQ Sbjct: 68 DQKEEIDYDFFLRKIKEAAEFRTRFV--DNPRACRVIYGEADFLPGLIVDRYEDTLVVQV 125 Query: 444 YAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEV 503 ++ K + D + + GI V + + GE + + Sbjct: 126 L----SLGMEKRIDWIRDALVEVFAPTGIYLRNDVPVRELEGLTQGKEVLYGECPREVLI 181 Query: 504 TEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKG------------------------ 539 E +V++ + TG F D R R + + KG Sbjct: 182 EENGLKYYVDIVEGQKTGFFYDQRENRASIAPLMKGWGEKHGISLTSMEVDGETKQVPVD 241 Query: 540 -------------KDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGL 586 + L F++TGS T++A GA+ T +D+S +E A+RN+ LNG Sbjct: 242 KRGKAVKNPFWDGAEVLECFTHTGSFTLNACKHGAKKVTALDISEHAIETAKRNITLNGF 301 Query: 587 TGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLK 643 R + A+ +LR EA + +D++ +DPP F+ S+ R + + + Sbjct: 302 LHRV-DFVVANAFDYLRENVEAGKSWDVVILDPPAFAKSRGA--VKGACRGYKDINLNGM 358 Query: 644 RLLRAGGTIMFSNNKRGFRMD--LDGLAKLGLKAQEI 678 +L+R GG ++ ++ + L + + + A++I Sbjct: 359 KLVRQGGFLVTASCSYHMSPELFLQTIQEAAVDAKKI 395 >UniRef50_C6LAG7 Hydrogenase-4, F subunit n=4 Tax=Clostridiales RepID=C6LAG7_9FIRM Length = 380 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 70/306 (22%), Positives = 133/306 (43%), Gaps = 12/306 (3%) Query: 396 TNRLRKNLKKFEKWARQE-GIECYRLYDADLP-EYNVAVDRYADWVVVQEYAPPKTIDAH 453 + +R ++ + ++ RL + + +D+++D +VV+ A Sbjct: 57 RDFIRMRVQNAWNYRKKTVDTGSCRLIFGEADFLPGIVIDKFSDVLVVESLALGIDRLKE 116 Query: 454 KARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEF-LEVTEYNAHLWV 512 + L +++A ++ + K RE++ + LGE + + + E V Sbjct: 117 TIVEALKEVLAEDGVIIRGVYERSDAKVREQEGMERCKGFLGEPFDTNVLIEENGVKYMV 176 Query: 513 NLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRT 572 ++ + TG FLD + R+ + ++ G L+ F++TGS ++AG GA VD S+T Sbjct: 177 DVVNGQKTGFFLDQKYNRQSIRRLCPGARVLDCFTHTGSFALNAGAAGAAEVLGVDASQT 236 Query: 573 YLEWAERNLRLNGLTGRAHRLIQADCLAW---LREANEQFDLIFIDPPTFSNSKRMEDAF 629 +E AE N RLNGL R + + D L E E FDL+ +DPP F+ S+ Sbjct: 237 GVEQAELNARLNGLEDRV-KFVCRDVFELLPELEEKGETFDLVILDPPAFTKSRS--SVK 293 Query: 630 DVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQ-DFA 688 + + + + +L++ GG + + +L + +A + K L Q +F Sbjct: 294 NAVKGYREINLRAMKLVKDGGFLATCSCSHFMTYEL--FTQTIRQAAQNVHKRLRQVEFR 351 Query: 689 RNRQIH 694 H Sbjct: 352 TQAPDH 357 >UniRef50_A3DM75 Putative RNA methylase n=1 Tax=Staphylothermus marinus F1 RepID=A3DM75_STAMF Length = 348 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 90/387 (23%), Positives = 155/387 (40%), Gaps = 68/387 (17%) Query: 3 SLFASTARGLEELLKTELE-NLGA-VECQVVQGGVHFKGD---TRLVYQSLMWSRLASRI 57 L + G+E++ E+ LG + + G V+ D +Y+ R +R Sbjct: 2 ELLYTVNPGIEDIASEEIRAELGGVTSFENMSGHVYHVVDNVSFEAIYR----LRSINRA 57 Query: 58 MLPLGECKVYSD--------LDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGA 109 + L + ++ S +L+ ++ I++ P +FAV L S + Sbjct: 58 FILLFKSRIGSRTNDLIKLREELFSSLETIHY--YITPYTSFAVDTERLGSHEYTSMDIS 115 Query: 110 MKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSG-DGLHLRGYRDRA 168 V + I+ K +P V+ P I V+V++ E + + L+G LH RGYR Sbjct: 116 RIVGEIIIKKVEEKTGIKPVVNLRTPHIIVHVFVKDENFFLGVSLTGSRSLHRRGYRIYD 175 Query: 169 GIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGW 228 A +K TLA A++ SG + ++DPMCG GT+ IEAA+ Sbjct: 176 HPAALKPTLAYAMLTLSGTRDKQVIVDPMCGGGTIPIEAAL------------------- 216 Query: 229 AQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEV 288 + EA + YG D + R I+ A+ NA +G+ + F V Sbjct: 217 ----------LHEEA-------------YIYGYDRNPRHIRGAKLNAYASGVYGKVVFGV 253 Query: 289 KDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSL-LGRIMKNQFGGWNLSLFSA 347 D +L + ++SNPPYG R A+ L+ L K+ G L++ + Sbjct: 254 WDARRLHEIFDE-QVDHIVSNPPYGIRYGDPVAIRKLYRDFLDSTYKSLKPGGRLTIITT 312 Query: 348 SPDL----LSCLQLRADKQYKAKNGPL 370 + + + R + ++G L Sbjct: 313 EYNYVLNKANYIGFRVVHKRTVQHGGL 339 >UniRef50_A6CDL6 Putative uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CDL6_9PLAN Length = 416 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 69/330 (20%), Positives = 128/330 (38%), Gaps = 21/330 (6%) Query: 376 NYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIE---CYRLYDADLPEYNVAV 432 N V + D + +TNRL + + E+ E E C ++ + + Sbjct: 78 NIRVRLFSWDESEVLDNSFWTNRLEQAVTLREQVGLLENFETSGCRLVFSESDQLSGLTI 137 Query: 433 DRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLV-LKTRERQKGKNQY 491 DRY W +VQ ++ + + + + A GI ++ E + +Q Sbjct: 138 DRYGAWFLVQF----SSLALSQKQDLIIQFLKARFPAKGIWLRTEKGMREAEGLEISDQL 193 Query: 492 QKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGS 551 E + E +++ TG +LD R R + K L L YTG+ Sbjct: 194 LDGEEPPAHFFLEENGIRYGMSMVTGQKTGFYLDQRENRLAAARYLKNHRTLELHCYTGA 253 Query: 552 ATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE---ANE 607 ++A + G A+S + D S++ ++ A N LNG+ R H A L + E Sbjct: 254 FALNAIIHGQAQSVVSYDSSQSAIDQATANAELNGIGNRIH-FQTGKAYAVLEQFKAEGE 312 Query: 608 QFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR-----GFR 662 QFD I +DPP + + + + +L + +L+ GG ++ + F+ Sbjct: 313 QFDSIILDPPKMARHRS--GVKQALKGYFSLNRLAFDVLKPGGILITCSCSGLISQVEFQ 370 Query: 663 MDLDGLAKL-GLKAQEITQKTLSQDFARNR 691 L +++ G Q + Q++ D + Sbjct: 371 QMLASVSQHTGRHMQILEQRSQPADHPVSP 400 >UniRef50_UPI00017455E0 hypothetical protein VspiD_12680 n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017455E0 Length = 308 Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats. Identities = 79/314 (25%), Positives = 138/314 (43%), Gaps = 34/314 (10%) Query: 408 KWARQE-----GIECYRLYDADLPEYN-VAVDRYADWVVVQEYAPPKTIDAHKARQRLFD 461 W R++ CYRL DA+ + + V+ + +++Q T + Sbjct: 9 AWNRRQSIITPDTTCYRLLDAEGDGFPDLWVEWFDGRLLLQTQRHQPTD--------VRP 60 Query: 462 IIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTG 521 ++ A V I +L +R K + E V E ++ T G Sbjct: 61 LVKAFPGVRSIYWKRL----DQRDKESPTWLWGETVEEPFTVLENGVTYEISFTSGYSQG 116 Query: 522 LFLDHRIARRMLGQMSKG-----KDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEW 576 +FLD R R + + + LNLF+YT + +V A G T+VD+S TYL+W Sbjct: 117 IFLDQRDNRLAIKERLAQTEPGSQRVLNLFAYTCAFSVAAAAG-GGIATSVDLSPTYLDW 175 Query: 577 AERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAFDVQR 633 +RNL+LNG+ H ++ D WL+ + ++ + +DPPTFS + ++ F V+ Sbjct: 176 GKRNLQLNGMDPAGHYFVKGDAFDWLQAFAKKGRKWQGVILDPPTFSRGQ-VKKVFRVEE 234 Query: 634 DHLALMKDLKRLLRAGGTIMFSNNKRG---FRMDL---DGLAKLGLKAQEITQKTLSQDF 687 D+ L+K ++L GG ++ N R F M+ G+A+ + + ++ DF Sbjct: 235 DYAELVKLATQVLEPGGWMLCCANTRKVSSFEMEEQVRSGVAQARRRLNKFQSASMPADF 294 Query: 688 ARNRQIHNCWLITA 701 + + + WL A Sbjct: 295 TGDAYLKSFWLDVA 308 >UniRef50_D2BML1 SAM-dependent methyltransferase n=5 Tax=Lactobacillales RepID=D2BML1_LACLK Length = 389 Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats. Identities = 73/309 (23%), Positives = 133/309 (43%), Gaps = 20/309 (6%) Query: 390 MVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYN-VAVDRYADWVVVQEYAPPK 448 + Y + + + E +RL++ + + +D Y + V Y Sbjct: 69 IDHHFYVEKFVNARALRANFYQDELTNAFRLFNGEGDGLGGLTIDFYNGFAVFSWYNQF- 127 Query: 449 TIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNA 508 + ++ + + A KL ++Q+ E E L V E Sbjct: 128 ---IYSQKKAIVKAFQVVFPDIKGAYEKLRF---SEAALESQHIFGQEAAEPLLVMENGV 181 Query: 509 HLWVNLTDYLDTGLFLDHRIARRMLGQ-MSKGKDFLNLFSYTGSATVHAGLGGARSTTTV 567 L + L TG+FLD + R L +S GK LN+FSYTG+ +V A GG+ TT+V Sbjct: 182 TYATYLNEGLMTGIFLDQKNVRGALAGGLSTGKTLLNMFSYTGAFSVAAAFGGSSQTTSV 241 Query: 568 DMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQ---FDLIFIDPPTFSNSKR 624 D+++ L+ +NG+ + ++ D + A ++ +D+I +DPP+F+ + Sbjct: 242 DLAKRSLDKTREQFLVNGIEPESQKIYVMDVFGYFNYAKKKELTYDMIVLDPPSFA--RN 299 Query: 625 MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK-----RGFR-MDLDGLAKLGLKAQEI 678 + F V +++ L+K+ +L GT++ S N + FR M + L G+K Sbjct: 300 GKKTFSVAKNYGELVKEAVEILENNGTLIASTNAANVSDKKFRQMIEEALKNKGVKFTVF 359 Query: 679 TQKTLSQDF 687 ++ L DF Sbjct: 360 QEEKLPADF 368 >UniRef50_Q3JX99 Predicted SAM-dependent methyltransferases n=55 Tax=Proteobacteria RepID=Q3JX99_BURP1 Length = 425 Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats. Identities = 67/318 (21%), Positives = 115/318 (36%), Gaps = 45/318 (14%) Query: 385 DSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRY-------- 435 D + + R+++ L A G + RL + + VD Y Sbjct: 68 DENEPIDHAFFKRRVQRALAHRR--AMISGTDAVRLVFGEADGLPGLIVDYYVAARGAAH 125 Query: 436 -------------------AD-----WVVVQEYAPPKTIDAHKARQRLFDIIAATISVLG 471 D +V Q A + + + A Sbjct: 126 TGDAAARAAEGGAAAPVAPGDGEGRGQLVCQFMAA----GVEHWKGAIVAALVAATGCPN 181 Query: 472 IAPNK-LVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIAR 530 + + ++ +E + + L E V++ + TG ++D R R Sbjct: 182 VYERSDVSIREKEGLEQTTGVLAGDAPPDTLIANENGVLYHVDVRNGHKTGFYVDQRENR 241 Query: 531 RMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRA 590 ++ Q ++ +D LN F YTG ++ A GGA+ ++D S L A+RN+ NG Sbjct: 242 ALVAQYARDRDVLNCFCYTGGFSLAALKGGAKRVVSIDSSGDALALAQRNVAANGFDAAR 301 Query: 591 HRLIQADCLAWLRE---ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLR 647 + + AD LR E+FDLI +DPP F+ ++ D R + + +LLR Sbjct: 302 AQWLDADAFKTLRRLVDEGERFDLIVLDPPKFAPTRDSVD--RAARAYKDINLSGLKLLR 359 Query: 648 AGGTIMFSNNKRGFRMDL 665 GG + + MDL Sbjct: 360 PGGLLFTYSCSGAIDMDL 377 >UniRef50_C9RKQ5 Putative RNA methylase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKQ5_FIBSS Length = 504 Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats. Identities = 95/443 (21%), Positives = 160/443 (36%), Gaps = 97/443 (21%) Query: 2 NSLFASTARGLEELLKTELEN-LGAVECQ----VVQGGVHFKGDTRLVYQSLMWSRLASR 56 + A + G E+ L ELE LG + G V F ++ + SR A+R Sbjct: 18 HRFLAVSPLGFEQTLSRELEIILGESATEQPHATGDGKVEFTTKLTEAWKVVAVSRTANR 77 Query: 57 IMLPLGECKVYSDLDLYLGVQAINWTEMFNP---------GATF-------------AVH 94 +++ + K + DL I W F+ + +H Sbjct: 78 VLMEIANFKAENFRDLEKKASEIPWELYFDKKTGNALQTRDESIIPSNSKLVTSNLPHIH 137 Query: 95 FSGLNDTIRNSQYGAMKVKDAI-------VDAFTRKNLPRPNVDRDAP--------DIRV 139 + + + +S A ++ I A T P R+AP + Sbjct: 138 VTCKHSRLYHSDAIAERLYKIIEGVSLPLASADTASATPSAGTPRNAPAQNENRSIQQNL 197 Query: 140 NVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGW--------QPGT 191 V + +I LDL+G+ L+ RG+ AP+KET+A+A++ + + QP T Sbjct: 198 YVNFLDDRCTIWLDLAGEELYKRGFERFVNDAPLKETIASAMIFEAFYTASLTTNHQPQT 257 Query: 192 PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW-----QEVKAE--AQ 244 L+DPM GSGT +EAA +A PG R + EA W QE + + Sbjct: 258 TLIDPMSGSGTFSLEAACIANKIIPGTCRD-FALKHQPAFKEATWNFLIRQETRDDKCVG 316 Query: 245 TRARKGLAEYS----------------------SHFYGSDSDARVIQRARTNARLAGIGE 282 +R L E+ + SD R + + N + Sbjct: 317 RVSRPCLHEHDRVQHLGLERSDNPKTNSETAAIAKIITSDISERAVSIIKHNIECCPLAS 376 Query: 283 L----ITFEVKDVAQLTNPLPKGPYG----TVLSNPPYGERLDSEPALIALHSLLGRIM- 333 + I + KD T G ++ NPPYG+RL + L++ +G+ + Sbjct: 377 ISPAPIAPQQKDFFSYTAKEIVDACGDTSPILVLNPPYGKRL--DFDAPKLYTQIGKKLT 434 Query: 334 -----KNQFGGW-NLSLFSASPD 350 + FG +++ + D Sbjct: 435 ELARDLHNFGKTLTVAILAPKDD 457 >UniRef50_B3PIV2 Putative lipoprotein n=12 Tax=Gammaproteobacteria RepID=B3PIV2_CELJU Length = 436 Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats. Identities = 72/320 (22%), Positives = 120/320 (37%), Gaps = 18/320 (5%) Query: 383 TPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVV 441 D + +R+++ L E + YRL D + VDR+ D++VV Sbjct: 110 NRDPSHPLDKSLLVHRIKQALSLRELAFAEPY---YRLIYGDSDLLPGLVVDRFGDYLVV 166 Query: 442 QEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFL 501 Q + + + + + + I G+ + + GE E + Sbjct: 167 QI----ASAGMEQVKDAIVEALVQVIKPAGVLLSNEHSARVLENLPEYTEVAYGEMPEVV 222 Query: 502 EVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGA 561 + E + TG F DHR+ R L Q GK L++FSY G V A + GA Sbjct: 223 ALVENGVRFMAPVQGGQKTGWFYDHRVNRAQLQQYVAGKRVLDVFSYIGGWGVQAAVAGA 282 Query: 562 RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLI--QADCLAWLREANEQFDLIFIDPPTF 619 + VD S + N +NG+ + + D L L E+FD++ +DPP F Sbjct: 283 QEVFCVDASTAATDAVLENASVNGVADKVAAIQGKAIDVLKQLIADQERFDVVVLDPPAF 342 Query: 620 SNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD--LDGLAKLG----L 673 ++ + A + H + + RLL G ++ ++ D LD + G Sbjct: 343 IKKRKDQKAGEAAYRH--INELGMRLLGRDGLLVSASCSMHLAKDTLLDIVRASGRHLDR 400 Query: 674 KAQEITQKTLSQDFARNRQI 693 Q I Q D + I Sbjct: 401 HVQIIGQGGQGPDHPIHPAI 420 >UniRef50_Q5SIT4 Putative uncharacterized protein TTHA1280 n=2 Tax=Thermus thermophilus RepID=Q5SIT4_THET8 Length = 382 Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats. Identities = 87/336 (25%), Positives = 133/336 (39%), Gaps = 32/336 (9%) Query: 365 AKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDAD 424 N D + Y A + + L + L + E RQ+ YRL A+ Sbjct: 48 LYNPHTDLAVRAYRFAPAEDPVAALLEN------LAQALARREAVLRQDPEGGYRLVHAE 101 Query: 425 LPE-YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRE 483 + VD YA VVQ AH L + A + K +TRE Sbjct: 102 GDLLPGLVVDYYAGHAVVQ-------ATAHAWEGLLPQVAEALRPHVQSVLAKNDARTRE 154 Query: 484 RQKGKNQYQK--LGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKD 541 +G Y + LGE E ++V E V+L TG +LD R R + + +G+ Sbjct: 155 -LEGLPLYVRPLLGEVPERVQVQEGRVRYLVDLRAGQKTGAYLDQRENRLYMERF-RGER 212 Query: 542 FLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW 601 L++FSY G +H L G R VD S L AE N RLNGL R+++A+ Sbjct: 213 ALDVFSYAGGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGN--VRVLEANAFDL 269 Query: 602 LR---EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 658 LR + E+FDL+ +DPP F+ K+ D R + + +LL+ GG + ++ Sbjct: 270 LRRLEKEGERFDLVVLDPPAFAKGKK--DVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 Query: 659 RGFR------MDLDGLAKLGLKAQEITQKTLSQDFA 688 M + + + ++ D Sbjct: 328 HHMTEPLFYAMVAEAAQDAHRLLRVVEKRGQPFDHP 363 >UniRef50_A7NRA9 SAM-dependent methyltransferase n=7 Tax=Bacteria RepID=A7NRA9_ROSCS Length = 402 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 17/325 (5%) Query: 378 HVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYA 436 +A ++ RL R GI YR + + VDRY Sbjct: 59 PIALRIFSTRTVPDIAWLRERLTAAWNLRAP-LRAAGITAYRWVFGEGDGVPGIVVDRYN 117 Query: 437 DWVVVQEYAPPKTIDAHKARQRLF--DIIAATISVLGIAPNKLVLKTRERQKGKNQYQKL 494 D V+Q + + D +++ ++ + + G + + L Sbjct: 118 DIAVLQASSAGTLTLIEDVATAILKVDPTVRRVALRMATESRSAIDEGDEGDGDARLRSL 177 Query: 495 --GEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSA 552 + V E+ V L TGLFLD R RR + ++ G+ LN F+YTG Sbjct: 178 YGESPPREIVVVEHGIRFAVALHTAQKTGLFLDQRENRRFVEGLAAGRTVLNCFAYTGGF 237 Query: 553 TVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE---ANEQF 609 +++A GGAR +VD+ + RNL LN L HR ADC L + A ++F Sbjct: 238 SLYALRGGARQVVSVDVGKGLASATARNLALNRLDDGRHRFETADCFELLEQYAAAGQRF 297 Query: 610 DLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL--DG 667 DL+ +DPP+F+ K E + QR ++ L R ++ GG + ++ + + Sbjct: 298 DLVILDPPSFARRK--ESRYAAQRAYVRLNALGMRCVKPGGLLATASCTTQVGPEAFREA 355 Query: 668 LAKLG----LKAQEITQKTLSQDFA 688 LA G + + I + D Sbjct: 356 LASAGALAERRLRIIHEAGQPLDHP 380 >UniRef50_D0MIF2 Putative RNA methylase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MIF2_RHOM4 Length = 408 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 88/341 (25%), Positives = 138/341 (40%), Gaps = 10/341 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGG-VHFKGDTRLVYQSLMWSRLASRIMLP 60 N S A G E ++ EL LG C + V + + R R+ L Sbjct: 25 NPPVVSCAAGFEPVVAEELRELGHTACYLKPAKLVLPEAGPDASLPLNFFGRTLHRVYLL 84 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 LG + + D+ Q + + +P FAV S A +V A+V+ Sbjct: 85 LGLGRAPTLQDVRALAQTVPFHAYLHPEQRFAVRAQRHGSHDFTSMDVAREVGSAVVERV 144 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 R D D PD+ + L + + L+ SG LH R +R AP+ TLAAA Sbjct: 145 QAHTGRRIRADLDTPDVEIMAELSDDQLLLLLNTSGPPLHRRHHRAFQHFAPLLPTLAAA 204 Query: 181 IVMRSGW-QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLH--RGRWGFSGWAQHDEAIWQ 237 ++ S + L+DPM G GT+ IEAA+LA + APGL G+ + D W+ Sbjct: 205 LLRLSSFPNNVDLLIDPMAGGGTIPIEAALLARNVAPGLLLPEGQLALFRLSFLDHTAWR 264 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 ++ A+ + R +D AR ++ + N G+ +T ++ Sbjct: 265 RLRHRAERQVRP---RSPVPILAADRYARNVRGMKANLEAMGVAADVTVCAGRAERM-AY 320 Query: 298 LPKGPYGT--VLSNPPYGERLDSEPALIALHSLLGRIMKNQ 336 L + P G +++NPPYG RL + L+ R Sbjct: 321 LERQPTGRRSIVTNPPYGLRLGDPRRIDRLYHDFARACARH 361 >UniRef50_D0LV46 Putative RNA methylase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LV46_HALO1 Length = 412 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 79/290 (27%), Positives = 135/290 (46%), Gaps = 18/290 (6%) Query: 411 RQEGIECYRLYDADLP-EYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISV 469 R G++ RL + + +DRYAD VV P A + D + + Sbjct: 110 RLAGLDGMRLVHGENDYMPGLVIDRYADTGVVMFDGP----GAAGFWEPRIDGVCEGLRR 165 Query: 470 LGIAPNKLVLKTRERQK--GKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHR 527 G+ +L + R + G + + + + E A V++ TG FLD R Sbjct: 166 GGVELARLWARPLPRVERGGAGRVLRGDAPPARIPIHEGEARFEVDVRAGQKTGFFLDQR 225 Query: 528 IARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT 587 R ++G+++ G + LNL++YTG +VHA LGGA+ ++VD++R + A N LNGL Sbjct: 226 RNRMLVGELAAGAEVLNLYAYTGGFSVHAALGGAQRVSSVDIARPAIASARDNFALNGLD 285 Query: 588 GRAHRLIQADCLAWLRE---ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKR 644 AH D LA+L +FDL+ +DPP+F+ S+R + R + + + R Sbjct: 286 PDAHEFAAEDALAFLERVQQRGRRFDLVIVDPPSFAPSERAKP--KALRAYGKVNELALR 343 Query: 645 LLRAGGTIM-FSNNKRGFRMDLDGL-----AKLGLKAQEITQKTLSQDFA 688 ++ AGGT++ S + D+ + A+ G + + Q+ +D Sbjct: 344 VVAAGGTLVSASCSSHVGGADMSEMLAQAAARAGRVVRIVEQRGADRDHP 393 >UniRef50_B8BYT7 Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8BYT7_THAPS Length = 636 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 106/536 (19%), Positives = 184/536 (34%), Gaps = 156/536 (29%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQV-VQGGVHFKGDTRLVYQSLMWSRLASRIML 59 + S FA+ GL+ +L +EL +LGA + GV F G ++ ++W R A +IM Sbjct: 100 IRSYFATCIPGLQYILASELTSLGATYVETQGLSGVAFTGSPKVGLNCILWCRTAHKIME 159 Query: 60 PLGE----------------------CKVYSDLDLYLGVQ-AINWTEMFNPGA----TFA 92 + + + DLY + A++ + G T + Sbjct: 160 LIASSADSSLGFGYDDYSHENGYGFSQGLRNADDLYQFAKIAVHTPTLLGDGQGGLSTIS 219 Query: 93 VHF---SGLNDTIRNSQYGAMKVKDAIVDAFTR----------------------KNLPR 127 V+ S + + + + A+ VK+A+VD+ R Sbjct: 220 VNTIYTSRVPKDLCHGHFTALTVKNALVDSVRELREEGDRPDVDVDDADVPLVCVVRGRR 279 Query: 128 -PNVDRDAPD-----------------IRVNVWLHKETASIALDL-SGDGLHLRGYR--- 165 + D I + L + I L SG LH RGYR Sbjct: 280 IESFRGRGRDARFRGGRGSGRGGKSEGIYEELELVAD-VDIYRCLHSGGSLHRRGYRSGN 338 Query: 166 ------------------------------------DRAGIAPIKETLAAAIVMRSGWQP 189 A +KE+LA+ +++ +GW Sbjct: 339 NLDLDWSEGVENDDYGDDSDWEISSNRRHSRDDNNKAPIHRAAMKESLASGLLLEAGWDK 398 Query: 190 ----------GTPLLDPMCGSGTLLIEAAMLATDRAPGLHR------------GRWGFSG 227 G L+DPM GSGTL EAA++A D APGL R + Sbjct: 399 LIEAARSDGQGAVLIDPMTGSGTLPTEAALIACDMAPGLLRIASLRGEGRNPHRYPPATR 458 Query: 228 WAQH-DEAIWQEVKAEAQTRARKGLAEYSSH----------FYGSDSDARVIQRARTNAR 276 W D A W + AEA RA+ G+ + G++ + R + +RT+ Sbjct: 459 WKDFSDLATWNRMLAEAAQRAKDGMKWAQATSETTQMKNVVILGNELNPRAVGLSRTSVA 518 Query: 277 LAGIGELITFEVKDV---------AQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHS 327 +G+G +++ + + ++ NPP+G RL + + Sbjct: 519 NSGVGAIVSINEGNCNCWKLGGGEGDTSKRAVVNGRTIIVCNPPWGVRLTED--IDESWV 576 Query: 328 LLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAEST 383 L ++ + G + S + DL L+++ + + D YH+ + + Sbjct: 577 SLREFLRREGHGAEAWVLSGNKDLTKILRMKKSRSVVVRTAEEDLRWLQYHIFQKS 632 >UniRef50_Q1AXR5 SAM-dependent methyltransferase n=5 Tax=Bacteria RepID=Q1AXR5_RUBXD Length = 391 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 74/322 (22%), Positives = 122/322 (37%), Gaps = 22/322 (6%) Query: 382 STPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVV 440 + + + +RLR L+ + YRL A+ + D Y + VV Sbjct: 67 AERREGVGIDGAWFGSRLRAALEYRAGLGI--DGDAYRLLHAEADGVPGLVADVYGEHVV 124 Query: 441 VQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEF 500 +Q + + + + +A +S G+ R + G+ E Sbjct: 125 LQVGSAA----VERRLELVVRALAELLSPAGVLLRGDAGSRRREGLRRTVAVLHGKVPEA 180 Query: 501 LEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGG 560 + V E V L TG FLD R R G+ ++G L++FSY G +HA Sbjct: 181 VVVREGPVRYRVPLWRGQKTGAFLDQRENRLAAGRHARG-RVLDVFSYGGGFALHAARR- 238 Query: 561 ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPP 617 A S VD S LE A N RLNGL + ++A+ LR +A E +D + +DPP Sbjct: 239 AASVEAVDSSAAALEQARENARLNGLGNLS--FVEANAFDLLRARSDAGEAYDTVILDPP 296 Query: 618 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL------DGLAKL 671 F+ ++R D R + + +LL GG ++ + + A Sbjct: 297 AFARTRR--DLPRAARAYKEINLRAMKLLAPGGVLVTCSCSYHLSREAMEGVLRSAAADA 354 Query: 672 GLKAQEITQKTLSQDFARNRQI 693 G + + + + D I Sbjct: 355 GRSLRVLEWRGQAADHPEVLNI 376 >UniRef50_Q1Q0N9 Similar to SAM-dependent methyltransferase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q0N9_9BACT Length = 408 Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 132/317 (41%), Gaps = 32/317 (10%) Query: 379 VAESTPDSKPAMVAEDYTNRLRKN--LKKFEKW-ARQEGI-------ECYRLYDADLPE- 427 + + ++ E+ T L K LKK E A +E + +CYRL + Sbjct: 51 IYNRKSNIGIRLLTENVTEHLCKEFILKKLEYAKALREEVLGIHKTSDCYRLVHGEADGL 110 Query: 428 YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNK-LVLKTRERQK 486 + +D++A +VV+ Y+ + D I +++ L N + R +K Sbjct: 111 SGLIIDKFAHVIVVEPYSAGYI--------GIMDWIVSSLKTLYPDSNVTVRPDARNAEK 162 Query: 487 GKNQYQKLGEK---GEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFL 543 + K+ + + + E N + +N TG FLD R R L + + K+ L Sbjct: 163 EGVDFSKVSRIYPCPDSVIICENNMRMMINFKSGHKTGFFLDQRENRLALSLLCRDKEVL 222 Query: 544 NLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR 603 + F YTG + A GARS T VD+ LE A+ N RLN A + D +LR Sbjct: 223 DCFCYTGGFGISAMRAGARSATGVDLDEKALETAKENARLN---SAAISYVHIDVFDFLR 279 Query: 604 E---ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRG 660 + + Q D++ +DP + + R + + + +++R GG ++ + G Sbjct: 280 KMYNSGTQTDVVILDPAKLAGC--TGEIKRAMRTYGDINRLGMQVVRPGGILLTCSCS-G 336 Query: 661 FRMDLDGLAKLGLKAQE 677 + D L+ L A E Sbjct: 337 LISEKDFLSILTRSAAE 353 >UniRef50_B0S9E6 SAM-dependent methyltransferase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0S9E6_LEPBA Length = 393 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 73/293 (24%), Positives = 125/293 (42%), Gaps = 29/293 (9%) Query: 413 EGIECYRLYDADLPE-YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLG 471 +RL+ ++ + VD Y D V+Q P RL + + + G Sbjct: 95 NDTNGFRLFHSEGDGVPGIVVDVYDDTAVLQLKTPGAI--------RLKENLVTFLEKFG 146 Query: 472 IAPNKLVLKTRERQKGKNQYQKL---GEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRI 528 +L+ RE+ K+ + G+K E + E + T TG FLD R Sbjct: 147 FV---TILEKREKTDSKHGDEISFYKGDKAETV-FKENGIQFISDTTKGQKTGFFLDQRE 202 Query: 529 ARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTG 588 R +LG+ +K K LN F+Y+G+ +V+A L GA+ ++D+S+ LE E+NL LNG + Sbjct: 203 NRSLLGRYAKNKIILNTFAYSGAFSVYALLNGAKMVHSLDISKQALELCEKNLELNGFSQ 262 Query: 589 R----AHRLIQADCLAWLREANEQ-FDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLK 643 H+ + DC +L++ + +D I +DPP F +K + R + + Sbjct: 263 ELLAVKHKSLVMDCFDYLKKMDSGIYDCIILDPPAF--TKNIATVIQASRGYKDINMRAI 320 Query: 644 RLLRAGGTIMFSNNKRGFRMDL------DGLAKLGLKAQEITQKTLSQDFARN 690 ++ GG I + + DL K + + T S D + + Sbjct: 321 SKIQDGGLIFTFSCSQHISFDLFKKIVFGAAKDAKKKVRILHHLTQSPDHSYS 373 >UniRef50_B6GEK4 Putative uncharacterized protein (Fragment) n=2 Tax=Collinsella RepID=B6GEK4_9ACTN Length = 326 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 72/194 (37%), Positives = 101/194 (52%), Gaps = 3/194 (1%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 + FAS G E L EL LG + + ++G V F G Y++ +WSRLASRI + L Sbjct: 14 HEFFASCPEGFEVALADELRALGLRQVRRLKGRVTFVGPVADAYRACLWSRLASRIFVTL 73 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 +LY AI W + PGAT AV G +D +RNS + A++VKDA+ D Sbjct: 74 ARFDARDADELYENAAAIAWEHVLRPGATLAVAARGTSDELRNSHFSALRVKDAVCDRLA 133 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDR--AGIAP-IKETLA 178 R RP+VD D PD R+++ + + AS+ LDLSGD L R R+ G A ++ A Sbjct: 134 RVLGERPSVDTDCPDCRLSLTIRDDRASLHLDLSGDPLFKRLPREATRPGAAHVLRPDYA 193 Query: 179 AAIVMRSGWQPGTP 192 A + + WQ Sbjct: 194 ALALAQINWQQTCA 207 Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 40/66 (60%) Query: 178 AAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 A +I S L+D C G + +EAA + RAPG+ R RWGF GWA+HDEA W Sbjct: 260 AQSIARDSAPTTFPVLIDLCCAGGGITLEAASVLAGRAPGIDRERWGFFGWAEHDEAAWA 319 Query: 238 EVKAEA 243 E++A+A Sbjct: 320 ELRADA 325 >UniRef50_B9XS18 Pseudouridine synthase n=1 Tax=bacterium Ellin514 RepID=B9XS18_9BACT Length = 536 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 78/305 (25%), Positives = 132/305 (43%), Gaps = 27/305 (8%) Query: 406 FEKWARQEGIECYRLYDADLPEY-NVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIA 464 E Q+ +RL + V+R D+++ Q P + + QRL + + Sbjct: 220 REAVVDQKETNAWRLIHGASDGWAGWYVERLGDFLLSQS-EQPVSAEQKAELQRLMN-LY 277 Query: 465 ATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFL 524 + V NK V +T +Q Q + + E ++ + GLFL Sbjct: 278 SARGVFHKILNKQVRRTNVQQ-ASPQLVLGDAVPDVFTMQENGLRYELSFNEGYSVGLFL 336 Query: 525 DHRIARRMLGQM------------SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRT 572 D R RR + ++ K+ LN F+YT +V A GA+ T++D+S+ Sbjct: 337 DQRDNRRRIVANHIAAGFPLFPNGAERKEVLNTFAYTCGFSVCAAKVGAK-VTSLDLSKK 395 Query: 573 YLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQ---FDLIFIDPPTFSNSKRMEDAF 629 YLEW +RN LN + H I D W++ ++ +DLI +DPPTFS SK AF Sbjct: 396 YLEWGKRNFELNQIDPTQHDFIYGDTFDWMKRLGKKGRAYDLIVLDPPTFSQSKE-HGAF 454 Query: 630 DVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD--LDGLAKLGLKA-QEITQK---TL 683 ++D+ L+ +L++ G ++ S N + L+ ++ L ++I Q+ Sbjct: 455 QAEKDYGELVSAALPILKSQGVLLASTNAARLEPEKFLEMVSAAVLATRRKILQQHYVPQ 514 Query: 684 SQDFA 688 DF Sbjct: 515 PPDFP 519 >UniRef50_B7DS77 Methyltransferase small n=2 Tax=Alicyclobacillus acidocaldarius RepID=B7DS77_9BACL Length = 413 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 64/318 (20%), Positives = 120/318 (37%), Gaps = 33/318 (10%) Query: 385 DSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECY-RLYDADLP-EYNVAVDRYADWVVVQ 442 + + + R ++ L+ ++A Q Y R + + VDR+ + +V Q Sbjct: 69 RPDEHIDVDFFIRRFQQALEYRRRFAPQAL--AYGRAVYGEADFVPGLVVDRFGEVLVAQ 126 Query: 443 EYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLE 502 + + + + GI V GE + ++ Sbjct: 127 VLTA----GMQRLWGQALEALVEVYKPAGILARNDVPVRALEGLPLVVETAYGEVPDVVD 182 Query: 503 VTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKG-----------------KDFLNL 545 V + V+L + TG F D R + + G L+ Sbjct: 183 VIDNGLTFSVDLREGQKTGYFWDQSENRAAIRPLMTGWTARRALFGEAPGDLDGAHVLDC 242 Query: 546 FSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE- 604 F +TG+ VHA GA T VD+S +E A +N R NG+ RA A+ +LRE Sbjct: 243 FCHTGAFAVHALHYGAAHVTAVDISADAVELARQNARRNGVLDRA-DFAVANAFDYLREQ 301 Query: 605 --ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFR 662 ++D++ +DPP F+ S++ ++ R + + R+LR GG ++ ++ Sbjct: 302 DARGARYDVVILDPPAFAKSRQSIES--ATRGYKEINLRAMRILREGGFLVTASCSYHMS 359 Query: 663 MD--LDGLAKLGLKAQEI 678 + D + + A ++ Sbjct: 360 PERFRDTVLDAAVDAHKV 377 Score = 42.6 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 2/59 (3%) Query: 255 SSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQL--TNPLPKGPYGTVLSNPP 311 ++H D A ++ AR NAR G+ + F V + Y V+ +PP Sbjct: 258 AAHVTAVDISADAVELARQNARRNGVLDRADFAVANAFDYLREQDARGARYDVVILDPP 316 >UniRef50_A9GQV8 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GQV8_SORC5 Length = 421 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 84/322 (26%), Positives = 128/322 (39%), Gaps = 23/322 (7%) Query: 383 TPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYN-VAVDRYADWVVV 441 P + RL + + W YRL + + + +DRY V+ Sbjct: 91 QRTQAPPLDERAIAERLERAFALRDGWFDGRDTTAYRLCNGEGDRVPSLVIDRYDRAAVI 150 Query: 442 QEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTR---ERQKGKNQYQKLGEK- 497 + RL +A + G+ L + E GK G Sbjct: 151 RLDGDM----LAPWLDRLLPHLARALGARGVRSIGLRARASAAGEDADGKKLAHLHGPPL 206 Query: 498 GEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKD-FLNLFSYTGSATVHA 556 + L V E + V+L TG FLD R R + ++ G+ LNLFSY G +V A Sbjct: 207 PDRLFVRETGIAMEVDLARGQKTGAFLDQRDNRARVRALAAGRRRVLNLFSYAGGFSVAA 266 Query: 557 GLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA---NEQFDLIF 613 LGGA T+VD + A+R R NG+ AH + AD +L +A +++DLI Sbjct: 267 ALGGAGRVTSVDSASAAHASAQRTFRENGVDPAAHEFVTADAFDFLEKARARGDRYDLII 326 Query: 614 IDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGL 673 DPP+F+ S+R + + L + R+L GG + ++ + D LA Sbjct: 327 CDPPSFAPSERAKP--RALGAYRRLHAAVARVLDRGGVLCAASCSSHITAE-DFLAT--- 380 Query: 674 KAQEITQKTLSQDFARNRQIHN 695 + TL +D R R IH Sbjct: 381 ----LDDATLERDDLRIRAIHG 398 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A4SME4 Ribosomal RNA large subunit methyltransferase L ... 826 0.0 UniRef50_A1S601 Ribosomal RNA large subunit methyltransferase L ... 819 0.0 UniRef50_Q0HJZ9 Ribosomal RNA large subunit methyltransferase L ... 805 0.0 UniRef50_A6V328 Ribosomal RNA large subunit methyltransferase L ... 802 0.0 UniRef50_A1SX09 Ribosomal RNA large subunit methyltransferase L ... 799 0.0 UniRef50_A4XWP8 Ribosomal RNA large subunit methyltransferase L ... 788 0.0 UniRef50_B4RZ48 Ribosomal RNA large subunit methyltransferase L ... 786 0.0 UniRef50_A6VW36 Ribosomal RNA large subunit methyltransferase L ... 778 0.0 UniRef50_C0N217 Putative RNA methylase family UPF0020 n=1 Tax=Me... 770 0.0 UniRef50_Q3KFC5 Ribosomal RNA large subunit methyltransferase L ... 768 0.0 UniRef50_Q47Z09 Ribosomal RNA large subunit methyltransferase L ... 766 0.0 UniRef50_A6VMR3 Ribosomal RNA large subunit methyltransferase L ... 765 0.0 UniRef50_Q1N650 Putative uncharacterized protein n=2 Tax=Oceanos... 762 0.0 UniRef50_Q60AX5 Ribosomal RNA large subunit methyltransferase L ... 761 0.0 UniRef50_UPI0000E10BA2 23S rRNA m(2)G2445 methyltransferase n=1 ... 760 0.0 UniRef50_Q5X0J6 Ribosomal RNA large subunit methyltransferase L ... 757 0.0 UniRef50_A0L8B5 Ribosomal RNA large subunit methyltransferase L ... 756 0.0 UniRef50_Q6AQA5 Ribosomal RNA large subunit methyltransferase L ... 756 0.0 UniRef50_C7RA96 Putative RNA methylase n=1 Tax=Kangiella koreens... 753 0.0 UniRef50_Q1YPL5 Putative uncharacterized protein n=1 Tax=gamma p... 747 0.0 UniRef50_A3JG83 Predicted methyltransferase n=1 Tax=Marinobacter... 745 0.0 UniRef50_Q2SCH1 Ribosomal RNA large subunit methyltransferase L ... 737 0.0 UniRef50_Q21JW7 Ribosomal RNA large subunit methyltransferase L ... 730 0.0 UniRef50_Q31IC8 Ribosomal RNA large subunit methyltransferase L ... 729 0.0 UniRef50_B0VAL5 Ribosomal RNA large subunit methyltransferase L ... 726 0.0 UniRef50_A4BHH9 Putative uncharacterized protein n=5 Tax=Proteob... 726 0.0 UniRef50_A5EX48 Ribosomal RNA large subunit methyltransferase L ... 724 0.0 UniRef50_Q5QX63 Ribosomal RNA large subunit methyltransferase L ... 720 0.0 UniRef50_Q3IGZ3 Ribosomal RNA large subunit methyltransferase L ... 718 0.0 UniRef50_D2U8T0 Putative rna methylase protein n=1 Tax=Xanthomon... 708 0.0 UniRef50_Q1QXV9 Ribosomal RNA large subunit methyltransferase L ... 705 0.0 UniRef50_B0U0U4 Ribosomal RNA large subunit methyltransferase L ... 702 0.0 UniRef50_P57444 Ribosomal RNA large subunit methyltransferase L ... 687 0.0 UniRef50_Q1QCP8 Ribosomal RNA large subunit methyltransferase L ... 682 0.0 UniRef50_B9ZLS0 Putative RNA methylase n=1 Tax=Thioalkalivibrio ... 673 0.0 UniRef50_A6GF98 Putative uncharacterized protein n=2 Tax=Proteob... 660 0.0 UniRef50_A5WGC0 Ribosomal RNA large subunit methyltransferase L ... 660 0.0 UniRef50_B2IA87 Ribosomal RNA large subunit methyltransferase L ... 625 e-177 UniRef50_C7N0P8 Predicted N6-adenine-specific DNA methylase n=1 ... 617 e-175 UniRef50_Q0VQU5 Ribosomal RNA large subunit methyltransferase L ... 613 e-174 UniRef50_D0KZE4 Putative RNA methylase n=1 Tax=Halothiobacillus ... 602 e-170 UniRef50_B9CL66 Methyltransferase n=1 Tax=Atopobium rimae ATCC 4... 601 e-170 UniRef50_C8WGP0 THUMP domain protein n=1 Tax=Eggerthella lenta D... 588 e-166 UniRef50_C8W7K3 THUMP domain protein n=1 Tax=Atopobium parvulum ... 574 e-162 UniRef50_C2D7E0 N6-adenine-specific DNA methytransferase n=1 Tax... 515 e-144 UniRef50_Q55156 Putative RNA methyltransferase slr0064 n=22 Tax=... 455 e-126 UniRef50_B8FHN3 Putative RNA methylase n=1 Tax=Desulfatibacillum... 450 e-125 UniRef50_A1ARJ2 Putative RNA methylase n=9 Tax=Desulfuromonadale... 450 e-124 UniRef50_C9Q0K8 THUMP domain/methyltransferase domain protein n=... 446 e-123 UniRef50_B5CV55 Putative uncharacterized protein n=1 Tax=Bactero... 443 e-123 UniRef50_Q2YA86 Putative RNA methylase n=3 Tax=Betaproteobacteri... 443 e-122 UniRef50_C6WWA7 Putative RNA methylase n=2 Tax=Betaproteobacteri... 442 e-122 UniRef50_Q9KC03 BH1771 protein n=3 Tax=Bacillales RepID=Q9KC03_B... 439 e-121 UniRef50_A0M2L5 Protein belonging to UPF0020-possibly an RNA met... 434 e-120 UniRef50_UPI0000E87EDF Putative RNA methylase:THUMP n=1 Tax=Meth... 433 e-120 UniRef50_A0Q0L2 Nucleic acid methylase n=6 Tax=Clostridiales Rep... 427 e-118 UniRef50_B6BTD9 N6-adenine-specific DNA methylase n=1 Tax=beta p... 427 e-118 UniRef50_C2MBZ0 THUMP domain protein n=1 Tax=Porphyromonas uenon... 427 e-118 UniRef50_A8FEF3 Site-specific DNA-methyltransferase (Adenine-spe... 426 e-117 UniRef50_UPI00016C3D60 hypothetical protein GobsU_18040 n=1 Tax=... 425 e-117 UniRef50_A6T245 N6-adenine-specific DNA methylase n=9 Tax=Betapr... 425 e-117 UniRef50_B7GKR8 Predicted N6-adenine-specific DNA methylase n=8 ... 424 e-117 UniRef50_Q7NRS5 Probable oxidoreductase n=1 Tax=Chromobacterium ... 423 e-116 UniRef50_C0DRY4 Putative uncharacterized protein n=1 Tax=Eikenel... 423 e-116 UniRef50_P50840 Putative RNA methyltransferase ypsC n=152 Tax=Fi... 423 e-116 UniRef50_C4ZFU5 Nucleic acid methylase n=25 Tax=Firmicutes RepID... 423 e-116 UniRef50_Q6MPB2 Putative N6-adenine-specific DNA methylase n=1 T... 420 e-116 UniRef50_Q2L074 Putative methylase n=4 Tax=Bordetella RepID=Q2L0... 420 e-116 UniRef50_Q7P2H5 METHYLTRANSFERASE n=10 Tax=Fusobacterium RepID=Q... 419 e-115 UniRef50_C0YIG9 Probable methylase n=1 Tax=Chryseobacterium gleu... 418 e-115 UniRef50_B4RPC6 Tou5 n=34 Tax=Proteobacteria RepID=B4RPC6_NEIG2 417 e-115 UniRef50_Q898M5 Methyltransferase n=2 Tax=Bacteria RepID=Q898M5_... 417 e-115 UniRef50_Q0K713 Predicted N6-adenine-specific DNA methylase n=11... 416 e-114 UniRef50_A9KSV9 Putative RNA methylase n=26 Tax=Bacteria RepID=A... 416 e-114 UniRef50_B0TF24 Thump domain protein n=33 Tax=Firmicutes RepID=B... 416 e-114 UniRef50_D1RAW3 Putative uncharacterized protein n=1 Tax=Parachl... 415 e-114 UniRef50_C3WCN4 Methyltransferase n=6 Tax=Fusobacterium RepID=C3... 412 e-113 UniRef50_C6X0X4 Methyltransferase n=1 Tax=Flavobacteriaceae bact... 412 e-113 UniRef50_A6NQS7 Putative uncharacterized protein n=1 Tax=Bactero... 411 e-113 UniRef50_B2V4U2 Methyltransferase n=7 Tax=Clostridium RepID=B2V4... 411 e-113 UniRef50_B2RJX4 Putative N6-adenine-specific DNA methylase n=2 T... 411 e-113 UniRef50_Q3SES4 N6-adenine-specific DNA methylase n=2 Tax=Betapr... 410 e-112 UniRef50_Q1DCA8 THUMP domain/methyltransferase domain protein n=... 408 e-112 UniRef50_C5WIH5 Methyltransferase n=45 Tax=Firmicutes RepID=C5WI... 406 e-111 UniRef50_B1CAN9 Putative uncharacterized protein n=1 Tax=Anaerof... 403 e-110 UniRef50_C0QBT1 Putative RNA methylase family protein n=2 Tax=De... 403 e-110 UniRef50_C1CIN4 Methyltransferase n=129 Tax=Bacilli RepID=C1CIN4... 402 e-110 UniRef50_C3JC56 RNA methylase family protein n=2 Tax=Bacteria Re... 402 e-110 UniRef50_Q2LXZ8 Predicted N6-adenine-specific DNA methylase n=3 ... 401 e-110 UniRef50_C9YEX1 Putative uncharacterized protein n=1 Tax=Curviba... 399 e-109 UniRef50_Q26FC8 N6-adenine-specific DNA methylase n=20 Tax=Bacte... 398 e-109 UniRef50_A6DTJ8 Putative uncharacterized protein n=1 Tax=Lentisp... 397 e-109 UniRef50_B5JRH4 Putative RNA methylase family UPF0020 n=1 Tax=Ve... 396 e-108 UniRef50_D2BKU1 RNA methyltransferase n=24 Tax=Lactobacillales R... 396 e-108 UniRef50_Q11Q19 RNA methylase family protein n=1 Tax=Cytophaga h... 396 e-108 UniRef50_Q311V9 Putative uncharacterized protein n=2 Tax=Desulfo... 396 e-108 UniRef50_A8ZTQ6 Putative RNA methylase n=1 Tax=Desulfococcus ole... 393 e-107 UniRef50_A4XLV3 Putative RNA methylase n=1 Tax=Caldicellulosirup... 393 e-107 UniRef50_C2KWZ1 Site-specific DNA-methyltransferase (Adenine-spe... 390 e-107 UniRef50_A1V086 THUMP domain protein n=52 Tax=Burkholderia RepID... 387 e-106 UniRef50_A6EAV4 Predicted N6-adenine-specific DNA methylase n=5 ... 386 e-105 UniRef50_Q6MD72 Putative uncharacterized protein n=1 Tax=Candida... 386 e-105 UniRef50_C5AB46 Predicted N6-adenine-specific DNA methylase n=3 ... 382 e-104 UniRef50_B0PDR5 Putative uncharacterized protein n=5 Tax=Clostri... 382 e-104 UniRef50_B9MKJ8 Putative RNA methylase n=1 Tax=Anaerocellum ther... 381 e-104 UniRef50_C8QZA7 Putative RNA methylase n=1 Tax=Desulfurivibrio a... 380 e-104 UniRef50_A6GTU6 Probable oxidoreductase n=1 Tax=Limnobacter sp. ... 379 e-103 UniRef50_A8G252 Putative RNA methylase family UPF0020 n=7 Tax=Pr... 378 e-103 UniRef50_D1VVQ9 Protein YpsC n=1 Tax=Peptoniphilus lacrimalis 31... 378 e-103 UniRef50_Q1NS64 Putative RNA methylase:THUMP n=2 Tax=delta prote... 373 e-101 UniRef50_B8JAH2 Putative RNA methylase n=5 Tax=Myxococcales RepI... 372 e-101 UniRef50_B0S0R6 Methyltransferase n=2 Tax=Finegoldia magna RepID... 372 e-101 UniRef50_B8FK67 Putative RNA methylase n=1 Tax=Desulfatibacillum... 369 e-100 UniRef50_C2BEE4 Site-specific DNA-methyltransferase (Adenine-spe... 368 e-100 UniRef50_B8LLK7 Putative uncharacterized protein n=1 Tax=Picea s... 368 e-100 UniRef50_Q3A2B2 Predicted N6-adenine-specific DNA methylase n=1 ... 366 1e-99 UniRef50_A4SVE4 Putative RNA methylase n=2 Tax=Polynucleobacter ... 363 1e-98 UniRef50_C7I387 Putative RNA methylase n=1 Tax=Thiomonas interme... 363 2e-98 UniRef50_B9P9P2 Predicted protein n=14 Tax=cellular organisms Re... 361 6e-98 UniRef50_Q1JY11 Putative RNA methylase n=1 Tax=Desulfuromonas ac... 359 2e-97 UniRef50_B1XYJ5 Putative RNA methylase n=1 Tax=Leptothrix cholod... 358 5e-97 UniRef50_C7PKB2 Putative RNA methylase n=2 Tax=Sphingobacteriale... 357 9e-97 UniRef50_A3UEM0 Putative uncharacterized protein n=1 Tax=Oceanic... 357 1e-96 UniRef50_A4SA02 Predicted protein (Fragment) n=1 Tax=Ostreococcu... 356 1e-96 UniRef50_B7QQX4 RNA methylase family protein n=35 Tax=Rhodobacte... 355 3e-96 UniRef50_C7HSK3 Methylase n=3 Tax=Anaerococcus RepID=C7HSK3_9FIRM 351 7e-95 UniRef50_C0QIM2 Putative N6-adenine-specific DNA methylase n=1 T... 350 1e-94 UniRef50_A8SGD5 Putative uncharacterized protein n=3 Tax=Ruminoc... 348 6e-94 UniRef50_A5GQS8 Predicted N6-adenine-specific DNA methylase n=21... 347 1e-93 UniRef50_A0LJ49 Putative RNA methylase n=1 Tax=Syntrophobacter f... 338 3e-91 UniRef50_Q1CZM0 RNA methylase family protein n=2 Tax=Cystobacter... 337 1e-90 UniRef50_B0S9B9 N6-adenine-specific DNA methylase n=2 Tax=Leptos... 333 1e-89 UniRef50_C8PM90 RNA methylase family protein n=2 Tax=Treponema R... 332 2e-89 UniRef50_C1A5B5 Putative uncharacterized protein n=1 Tax=Gemmati... 330 9e-89 UniRef50_Q57880 Putative RNA methyltransferase MJ0438 n=5 Tax=Me... 329 2e-88 UniRef50_Q0F3C8 Putative uncharacterized protein n=1 Tax=Maripro... 329 2e-88 UniRef50_C4FAV8 Putative uncharacterized protein (Fragment) n=2 ... 324 8e-87 UniRef50_A8F4G2 Putative RNA methylase n=1 Tax=Thermotoga lettin... 324 9e-87 UniRef50_A3VSE9 Putative uncharacterized protein n=1 Tax=Parvula... 318 7e-85 UniRef50_B7IFP0 Methyltransferase n=1 Tax=Thermosipho africanus ... 315 3e-84 UniRef50_C7N3A2 Predicted SAM-dependent methyltransferase n=1 Ta... 312 3e-83 UniRef50_Q04TW7 N6-adenine-specific DNA methylase n=4 Tax=Leptos... 311 6e-83 UniRef50_D1R8Y2 Putative uncharacterized protein n=1 Tax=Parachl... 310 1e-82 UniRef50_B8GQ82 Oxidoreductase n=26 Tax=Proteobacteria RepID=B8G... 307 1e-81 UniRef50_A6LJF6 Putative RNA methylase n=1 Tax=Thermosipho melan... 306 2e-81 UniRef50_O28105 Putative RNA methyltransferase AF_2178 n=4 Tax=A... 305 3e-81 UniRef50_A4EBB5 Putative uncharacterized protein n=4 Tax=Bacteri... 301 4e-80 UniRef50_UPI0001621339 predicted protein n=1 Tax=Physcomitrella ... 301 4e-80 UniRef50_A7HLT5 Putative RNA methylase n=1 Tax=Fervidobacterium ... 301 8e-80 UniRef50_A0KKF0 Ribosomal RNA large subunit methyltransferase I ... 299 2e-79 UniRef50_C7PR68 Methyltransferase type 11 n=1 Tax=Chitinophaga p... 299 2e-79 UniRef50_Q1DAR2 Putative uncharacterized protein n=2 Tax=Cystoba... 299 3e-79 UniRef50_Q6MHD5 Putative uncharacterized protein n=1 Tax=Bdellov... 298 6e-79 UniRef50_D2EHY6 N6-adenine-specific DNA methylase (Fragment) n=6... 296 2e-78 UniRef50_B5IEU1 Putative RNA methylase n=2 Tax=Aciduliprofundum ... 296 3e-78 UniRef50_A2SC20 N6-adenine-specific DNA methylase-like protein n... 293 1e-77 UniRef50_B5XY38 Ribosomal RNA large subunit methyltransferase I ... 292 4e-77 UniRef50_B5F1W3 Ribosomal RNA large subunit methyltransferase I ... 290 1e-76 UniRef50_D0LH66 Oxidoreductase n=1 Tax=Haliangium ochraceum DSM ... 289 2e-76 UniRef50_B5Y5B8 Predicted protein n=1 Tax=Phaeodactylum tricornu... 289 3e-76 UniRef50_Q12JE5 Ribosomal RNA large subunit methyltransferase I ... 289 4e-76 UniRef50_C6XXB0 PUA domain containing protein n=4 Tax=Sphingobac... 288 5e-76 UniRef50_A4J674 SAM-dependent methyltransferase n=33 Tax=Bacteri... 287 1e-75 UniRef50_A8DJY9 SAM-dependent methyltransferase n=2 Tax=Bacteria... 286 2e-75 UniRef50_Q6MCL8 Putative uncharacterized protein n=1 Tax=Candida... 284 6e-75 UniRef50_C8PND5 Putative uncharacterized protein n=1 Tax=Trepone... 283 1e-74 UniRef50_B0N335 Putative uncharacterized protein n=3 Tax=Bacteri... 282 3e-74 UniRef50_C1E310 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 282 3e-74 UniRef50_Q04XY1 SAM-dependent methyltransferase n=4 Tax=Leptospi... 282 3e-74 UniRef50_Q6MCD2 Putative uncharacterized protein n=1 Tax=Candida... 281 5e-74 UniRef50_Q73LF1 Putative uncharacterized protein n=1 Tax=Trepone... 280 1e-73 UniRef50_A6GJE9 Putative uncharacterized protein n=1 Tax=Plesioc... 279 2e-73 UniRef50_Q7ND71 Glr4365 protein n=1 Tax=Gloeobacter violaceus Re... 279 3e-73 UniRef50_C7GB40 Methyltransferase n=13 Tax=Bacteria RepID=C7GB40... 278 5e-73 UniRef50_Q2LSE2 SAM-dependent methyltransferase n=1 Tax=Syntroph... 276 2e-72 UniRef50_A8ZX82 Putative uncharacterized protein n=2 Tax=Desulfo... 275 4e-72 UniRef50_C8W8S0 SAM-dependent methyltransferase n=2 Tax=Atopobiu... 275 4e-72 UniRef50_UPI00016C4550 methyltransferase n=1 Tax=Gemmata obscuri... 275 5e-72 UniRef50_A3J3C9 Putative uncharacterized protein n=1 Tax=Flavoba... 275 5e-72 UniRef50_C7RKQ3 PUA domain containing protein n=3 Tax=Proteobact... 274 6e-72 UniRef50_A0LJE8 SAM-dependent methyltransferase n=1 Tax=Syntroph... 274 6e-72 UniRef50_C0ZB58 Putative uncharacterized protein n=2 Tax=Firmicu... 274 9e-72 UniRef50_B0SEV3 SAM-dependent methyltransferase n=2 Tax=Leptospi... 274 9e-72 UniRef50_Q3ITL0 Putative uncharacterized protein n=1 Tax=Natrono... 273 2e-71 UniRef50_C9L1Z6 PUA domain protein n=33 Tax=Bacteria RepID=C9L1Z... 272 2e-71 UniRef50_Q39XD7 SAM-dependent methyltransferase n=4 Tax=Desulfur... 272 3e-71 UniRef50_C0QT70 Methyltransferase n=2 Tax=Hydrogenothermaceae Re... 272 4e-71 UniRef50_B7FV41 Predicted protein n=1 Tax=Phaeodactylum tricornu... 271 6e-71 UniRef50_B5EPR2 Methyltransferase small n=2 Tax=Acidithiobacillu... 271 9e-71 UniRef50_Q31EI2 SAM-dependent methyltransferase n=17 Tax=Gammapr... 270 1e-70 UniRef50_D2R1D4 Methyltransferase small n=1 Tax=Pirellula staley... 269 3e-70 UniRef50_O67850 Putative uncharacterized protein n=2 Tax=Aquific... 269 3e-70 UniRef50_Q025J5 SAM-dependent methyltransferase n=1 Tax=Candidat... 269 3e-70 UniRef50_D0LIJ5 Putative RNA methylase n=1 Tax=Haliangium ochrac... 268 7e-70 UniRef50_C6NWD6 LSU m5C1962 methyltransferase RlmI n=1 Tax=Acidi... 267 9e-70 UniRef50_C6IZE3 PUA domain-containing protein n=2 Tax=Bacillales... 267 9e-70 UniRef50_Q11NR8 SAM-dependent methyltransferase n=1 Tax=Cytophag... 267 9e-70 UniRef50_B3QNQ6 PUA domain containing protein n=12 Tax=Chlorobia... 267 1e-69 UniRef50_C7N186 SAM-dependent methyltransferase n=13 Tax=Bacteri... 266 3e-69 UniRef50_B2V9T0 Methyltransferase small n=4 Tax=Bacteria RepID=B... 265 4e-69 UniRef50_A7HKL6 PUA domain containing protein n=9 Tax=Thermotoga... 265 4e-69 UniRef50_B3PIV2 Putative lipoprotein n=12 Tax=Gammaproteobacteri... 265 6e-69 UniRef50_A3DM75 Putative RNA methylase n=1 Tax=Staphylothermus m... 264 7e-69 UniRef50_B2UN28 Putative SAM-dependent methyltransferase n=3 Tax... 264 1e-68 UniRef50_D2QFB5 Methyltransferase n=14 Tax=Bacteria RepID=D2QFB5... 264 1e-68 UniRef50_Q2VZ09 Predicted SAM-dependent methyltransferase n=6 Ta... 263 1e-68 UniRef50_Q7MSX4 Putative uncharacterized protein n=1 Tax=Wolinel... 263 2e-68 UniRef50_B3DWI3 SAM-dependent methyltransferase n=1 Tax=Methylac... 263 2e-68 UniRef50_Q1AXR5 SAM-dependent methyltransferase n=5 Tax=Bacteria... 262 3e-68 UniRef50_C6LAG7 Hydrogenase-4, F subunit n=4 Tax=Clostridiales R... 262 3e-68 UniRef50_C1ZEX7 Predicted SAM-dependent methyltransferase n=1 Ta... 262 3e-68 UniRef50_C7H850 Methyltransferase n=8 Tax=Bacteria RepID=C7H850_... 262 4e-68 UniRef50_C9MRP3 Methyltransferase n=7 Tax=Prevotella RepID=C9MRP... 261 5e-68 UniRef50_B7DS77 Methyltransferase small n=2 Tax=Alicyclobacillus... 261 6e-68 UniRef50_C6CTT3 PUA domain containing protein n=2 Tax=Paenibacil... 261 8e-68 UniRef50_B1ICH9 Methyltransferase n=65 Tax=Streptococcaceae RepI... 260 1e-67 UniRef50_A4IKQ9 Predicted SAM-dependent methyltransferase n=8 Ta... 260 2e-67 UniRef50_Q3JX99 Predicted SAM-dependent methyltransferases n=55 ... 259 2e-67 UniRef50_Q2IKG3 SAM-dependent methyltransferase n=6 Tax=Cystobac... 258 7e-67 UniRef50_B5YL48 Methyltransferase small domain family n=1 Tax=Th... 257 8e-67 UniRef50_C4FU68 Putative uncharacterized protein n=1 Tax=Catonel... 257 1e-66 UniRef50_Q5SIT4 Putative uncharacterized protein TTHA1280 n=2 Ta... 257 1e-66 UniRef50_P39587 Putative ribosomal RNA large subunit methyltrans... 256 2e-66 UniRef50_A6CDL6 Putative uncharacterized protein n=1 Tax=Plancto... 256 3e-66 UniRef50_C2HC77 S-adenosyl-L-methionine-dependent methyltransfer... 254 8e-66 UniRef50_A8AXZ7 Methyltransferase n=5 Tax=Streptococcus RepID=A8... 254 1e-65 UniRef50_A3ZNP5 Putative uncharacterized protein n=1 Tax=Blastop... 252 3e-65 UniRef50_C5A4F2 SAM-dependent methyltransferase, putative n=5 Ta... 252 4e-65 UniRef50_C8NHK6 SAM (And some other nucleotide) binding motif, P... 251 6e-65 UniRef50_B1ZV13 Putative SAM-dependent methyltransferase n=2 Tax... 250 9e-65 UniRef50_A1AUW2 SAM-dependent methyltransferase n=10 Tax=Desulfu... 250 2e-64 UniRef50_A8VSD5 Oligopeptide/dipeptide ABC transporter, ATPase s... 249 2e-64 UniRef50_A4S9U5 Predicted protein n=1 Tax=Ostreococcus lucimarin... 249 3e-64 UniRef50_A8J6H0 Predicted protein (Fragment) n=1 Tax=Chlamydomon... 249 4e-64 UniRef50_D0MIF2 Putative RNA methylase n=1 Tax=Rhodothermus mari... 248 5e-64 UniRef50_A7NRA9 SAM-dependent methyltransferase n=7 Tax=Bacteria... 248 6e-64 UniRef50_A8F4H7 Putative uncharacterized protein n=1 Tax=Thermot... 248 7e-64 UniRef50_D0LV46 Putative RNA methylase n=1 Tax=Haliangium ochrac... 246 2e-63 UniRef50_Q12EM8 SAM-dependent methyltransferase n=4 Tax=Comamona... 245 4e-63 UniRef50_B0S9E6 SAM-dependent methyltransferase n=2 Tax=Leptospi... 245 5e-63 UniRef50_Q0ABR6 SAM-dependent methyltransferase n=15 Tax=Gammapr... 245 5e-63 UniRef50_B9HYB4 Predicted protein n=11 Tax=Embryophyta RepID=B9H... 245 5e-63 UniRef50_Q30VQ2 SAM-dependent methyltransferase n=5 Tax=Desulfov... 245 5e-63 UniRef50_C3WGE6 SAM-dependent methyltransferase n=1 Tax=Fusobact... 245 6e-63 UniRef50_C9RKQ5 Putative RNA methylase n=1 Tax=Fibrobacter succi... 244 1e-62 UniRef50_B2UZQ1 Methyltransferase n=3 Tax=Clostridium botulinum ... 244 1e-62 UniRef50_C1ZEN9 Predicted SAM-dependent methyltransferase n=1 Ta... 243 1e-62 UniRef50_Q1Q0N9 Similar to SAM-dependent methyltransferase n=1 T... 243 2e-62 UniRef50_A9GP63 Putative uncharacterized protein n=1 Tax=Sorangi... 243 2e-62 UniRef50_D2QYD2 Putative uncharacterized protein n=1 Tax=Pirellu... 242 3e-62 Sequences not found previously or not previously below threshold: >UniRef50_A4SME4 Ribosomal RNA large subunit methyltransferase L n=273 Tax=Gammaproteobacteria RepID=RLML_AERS4 Length = 719 Score = 826 bits (2133), Expect = 0.0, Method: Composition-based stats. Identities = 418/715 (58%), Positives = 512/715 (71%), Gaps = 15/715 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M FA+ +GLE LL EL LGA + + GVHFKG+ + Y++ +WSR ASRI+L Sbjct: 1 MKEFFATCPKGLENLLADELTTLGAEQVRETVAGVHFKGELAIGYKACLWSRFASRIVLV 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L E ++ DLDLYLG I W E F+ +T AV F+G N IRN+QYGA+K+KDAIVD F Sbjct: 61 LSEFQMNDDLDLYLGAHTIPWEEHFSGTSTIAVDFTGTNPAIRNTQYGALKIKDAIVDRF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 T++ RP+VD+ APDIR+ L K A+I LDLSG LH R YR G AP+KE LA A Sbjct: 121 TKRGHVRPDVDKKAPDIRIMAHLGKGKANITLDLSGPALHQRFYRQGTGEAPLKENLACA 180 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 ++ RSGW G P++DPMCGSGTLLIEAA +A D AP L R R+GF W QHD +WQ + Sbjct: 181 MIARSGW-AGEPMMDPMCGSGTLLIEAAFIAADMAPALRRERFGFDRWLQHDSELWQSLM 239 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP- 299 EAQ RA++G+ +G D+D RV+ +AR NA+ AG+ LITF+ DV QL NPLP Sbjct: 240 MEAQVRAKRGMQRCEVKLFGCDADPRVLMKARDNAKAAGVAHLITFKQADVTQLENPLPM 299 Query: 300 ------------KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSA 347 G ++SNPPYGERL PAL+ +H LG ++ F GW +S+ SA Sbjct: 300 PAVVEGEVSQEEARQVGMLISNPPYGERLGEFPALLEVHQALGDALRRGFQGWRVSILSA 359 Query: 348 SPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFE 407 SP+LLSCL+LRADKQY+ NG L+C +NY +A + S+ + +D+ NRLRKNLK E Sbjct: 360 SPELLSCLRLRADKQYRLFNGALECQLRNYQIALDSVASQKEVA-QDFANRLRKNLKTLE 418 Query: 408 KWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATI 467 KWA +EGI+CYRLYDADLPEYN A+DRY D++VVQEYA PK I A K RQRL D++ A I Sbjct: 419 KWASKEGIDCYRLYDADLPEYNAAIDRYQDYLVVQEYAAPKDIPAQKTRQRLLDMVQAAI 478 Query: 468 SVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHR 527 V G+ K++LK RERQ+GK QYQKL + +EV EY A LWVNL DYLDTGLFLDHR Sbjct: 479 KVTGMDGEKVILKVRERQEGKQQYQKLAAEQHRMEVQEYGARLWVNLYDYLDTGLFLDHR 538 Query: 528 IARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT 587 RRMLGQM+KGK FLNLF+YTGSATVHAGLGGA TTTVDMS TYL WA+ N+RLN L Sbjct: 539 QTRRMLGQMAKGKRFLNLFAYTGSATVHAGLGGASETTTVDMSHTYLNWAQDNMRLNSLV 598 Query: 588 GRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLR 647 GR H+ +QADCL WL EA++Q+DLIFIDPPTFSNSKRM+++FDVQRDHL LM+ LKRLL Sbjct: 599 GRQHKFVQADCLKWLSEADDQYDLIFIDPPTFSNSKRMDESFDVQRDHLLLMQHLKRLLA 658 Query: 648 AGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITAA 702 A GT++FSNNKR F+MDL GL GLKAQ IT KT +DF RN+ IHNCW+IT A Sbjct: 659 ADGTLVFSNNKRHFKMDLAGLEAAGLKAQNITSKTRPKDFERNQHIHNCWIITHA 713 >UniRef50_A1S601 Ribosomal RNA large subunit methyltransferase L n=7 Tax=Gammaproteobacteria RepID=RLML_SHEAM Length = 708 Score = 819 bits (2115), Expect = 0.0, Method: Composition-based stats. Identities = 362/710 (50%), Positives = 469/710 (66%), Gaps = 12/710 (1%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M + FA+ +G E L ELE LGA + GV+F YQ +W+RLASRI+L Sbjct: 1 MFNFFAAAPKGFEYALAKELETLGAENVRESVAGVYFSASLAQGYQITLWTRLASRIVLI 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L + S LY I+W F+ +TF++ F G I NSQ+GA+K+KDA+VD F Sbjct: 61 LFTGECQSAEQLYNAAYTIDWPSHFSNRSTFSIDFHGTGGFINNSQFGALKIKDAVVDRF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 +L RP+V + PD+R++ + +I ++ SG LH RGYR G AP+KE LAA Sbjct: 121 RDDDLSRPDVVKGHPDMRIDAHYGRGKITIGINFSGAALHQRGYRGNTGEAPLKENLAAN 180 Query: 181 IVMRSGWQPGT-PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 ++ RSGW LLDP CGSGT+LIEAA++A D APGL R R+GF W +HD+A+WQ+V Sbjct: 181 MLYRSGWADNPVTLLDPFCGSGTVLIEAALMACDIAPGLMRERFGFEHWRRHDQALWQQV 240 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 EA+ RA G FYGSD D+RV+ A+ NA AG+ + I F+V + L P+ Sbjct: 241 IEEAKARASLGKTRCQLKFYGSDIDSRVVALAKRNANSAGVFDFIDFKVANALNLEPPVA 300 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 + G VL+NPPYGERL + +L+ L+ LG K +GGW L L + +L+S L+L+A Sbjct: 301 E---GMVLTNPPYGERLGNVTSLLQLYFQLGEKFKQSYGGWKLGLLCSDMELVSSLKLKA 357 Query: 360 DKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAE--------DYTNRLRKNLKKFEKWAR 411 DKQ K NG L+C Y + ++ + + NRL+KNLK+ EKWA+ Sbjct: 358 DKQMKMYNGALECAFNLYTLHATSTRRDIPVDTTGQGGEIAAPFANRLKKNLKQLEKWAK 417 Query: 412 QEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLG 471 +EGI+ YRLYDAD+PEYNVAVDRY D+VVVQEYA P I ++RL D++ A LG Sbjct: 418 REGIDSYRLYDADIPEYNVAVDRYLDYVVVQEYAAPSAIPEAVTKRRLTDVLLALPRALG 477 Query: 472 IAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARR 531 I P+K+VLKTRERQKG NQYQKL + L TEY +NLTDYLDTGLFLDHR+ R+ Sbjct: 478 IDPDKIVLKTRERQKGTNQYQKLDGEKLELVTTEYGCSFKLNLTDYLDTGLFLDHRLTRK 537 Query: 532 MLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAH 591 ++G+ +K +D LNLF+YTGSA+VHAG GGA+S TTVDMS TYL WA+ N LNGL GR + Sbjct: 538 LVGEKAKNRDVLNLFAYTGSASVHAGKGGAKSVTTVDMSNTYLNWAKDNFMLNGLIGRQY 597 Query: 592 RLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGT 651 + QADCL W+R+ QFDLIFIDPPTFSNSKRMED+FDVQRDH+ L+ LK+LLR GG Sbjct: 598 QFEQADCLQWIRDCERQFDLIFIDPPTFSNSKRMEDSFDVQRDHVDLLASLKKLLRPGGE 657 Query: 652 IMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 I+FSNNKR F+MD++ LA GLKA I K L D+ARN QIHNCW++T Sbjct: 658 IVFSNNKRKFKMDMEALAAAGLKAVNIDDKVLPMDYARNPQIHNCWVVTH 707 >UniRef50_Q0HJZ9 Ribosomal RNA large subunit methyltransferase L n=21 Tax=Alteromonadales RepID=RLML_SHESM Length = 713 Score = 805 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 348/716 (48%), Positives = 465/716 (64%), Gaps = 17/716 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M + FA+ +G E L EL GA E + GV+F L Y+ +W+RLASRI+L Sbjct: 1 MLNFFAAAPKGFEYSLAQELTEFGATEIKESVAGVYFTAPLALAYRITLWTRLASRIVLV 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + + S LY I+W+ F+ TF++ F G I N+Q+GA+K+KDAIVD F Sbjct: 61 IYKGPCESAEQLYNAAYCIDWSSHFSNRNTFSIDFHGTGGFINNTQFGALKIKDAIVDRF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RPNV R DI+++ +IA++ SG LH RGYR G AP+KE LAA Sbjct: 121 RDDGDARPNVARIDADIKIDAHFRNGVITIAMNFSGPSLHQRGYRSTTGEAPLKENLAAN 180 Query: 181 IVMRSGWQP-GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 +++RSGW+ T LLDP CGSGT+LIEAA++A D APGL R R+GF W +HD+A W E+ Sbjct: 181 MLVRSGWKAAPTTLLDPFCGSGTVLIEAALMAADIAPGLQRSRFGFEHWRRHDKATWHEI 240 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 EA+ RA G+ FYGSD D+R++ A+ NA+ AG+ ELI F+V + + P Sbjct: 241 LEEAKARASLGVKRCDVKFYGSDIDSRLVALAKRNAQNAGVLELIDFKVANALNVEPPAG 300 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 + G +++NPPYGERL S L+ L+ LG K +FGGW +++ + +L+S L+L+A Sbjct: 301 E---GYLITNPPYGERLGSVSELLQLYYQLGDKFKKEFGGWKVAMLCSDIELISALKLKA 357 Query: 360 DKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVA---------EDYTNRLRKNLKKFEKWA 410 DKQ K NG L+C Y + + ++ + NR++KN K+ EKWA Sbjct: 358 DKQMKMFNGALECAFNLYTLHAQSTRRDTPVLPEGVDIADIAPAFANRIKKNAKQLEKWA 417 Query: 411 RQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVL 470 ++EGI+ YRLYDAD+PEYNVAVDRY D +VVQEY P +I ++RL D++ A + + Sbjct: 418 KKEGIDSYRLYDADIPEYNVAVDRYLDHIVVQEYMAPASIPEAVTKRRLSDVLLALPAAI 477 Query: 471 GIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIAR 530 G+ P+K+ +KTRERQKG NQYQKL E+ L TEY A +NLT YLDTGLFLDHR+ R Sbjct: 478 GVDPHKITMKTRERQKGTNQYQKLDERKLELITTEYGAKFKLNLTGYLDTGLFLDHRLTR 537 Query: 531 RMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRA 590 R++GQ SKG+ LNLFSYTGSA+VHA LGGA+S TTVDMS TYL WA+ N LN L+G+ Sbjct: 538 RLVGQKSKGRRVLNLFSYTGSASVHAALGGAKSVTTVDMSNTYLAWAKENFALNDLSGKQ 597 Query: 591 HRLIQADCLAWLR----EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLL 646 + +QADCL W+R + + Q+DLIFIDPPTFSNSKRMED+FDVQRDH+ L+ L +LL Sbjct: 598 YEFVQADCLQWIRDSALDKSAQYDLIFIDPPTFSNSKRMEDSFDVQRDHVNLLGMLIKLL 657 Query: 647 RAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITAA 702 G I+FSNNKR F+MD + LAK+ +K + I TL D+ RN IHN WLIT A Sbjct: 658 SPNGEIVFSNNKRKFKMDTETLAKMKIKVENIDDLTLPMDYKRNPHIHNTWLITHA 713 >UniRef50_A6V328 Ribosomal RNA large subunit methyltransferase L n=10 Tax=Gammaproteobacteria RepID=RLML_PSEA7 Length = 725 Score = 802 bits (2072), Expect = 0.0, Method: Composition-based stats. Identities = 333/723 (46%), Positives = 447/723 (61%), Gaps = 26/723 (3%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + LF + +GLE LL E + LG E + V +G + Y+ +WSRLA+R++L Sbjct: 4 VYELFLTCPKGLESLLLEEAQGLGLSEARAQVSAVRGQGSLEVAYRLCLWSRLANRVLLV 63 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L V + +YL V A+NW + + G T AV FSG I N+ +GA+KVKDAIVD Sbjct: 64 LARFPVENAESMYLAVHAVNWEDHLDAGGTLAVEFSGKGSGIDNTHFGALKVKDAIVDNL 123 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 ++ RP+VD+ PD+RV++ L + A+++LDLSG LH RGYR + G AP+KE LAAA Sbjct: 124 RERSGRRPSVDKVNPDVRVHLHLDRGQATLSLDLSGHSLHQRGYRLQQGAAPLKENLAAA 183 Query: 181 IVMRSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 +++R+GW G L DPMCG GT L+EAA++A D AP L R RWGFS W H A+W Sbjct: 184 VLIRAGWPKIAAEGGALADPMCGVGTFLVEAALMAADIAPNLRRERWGFSNWLGHVPALW 243 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 +++ EAQ RA GLA G ++D R+IQ AR N AG+ + + ++A Sbjct: 244 RKLHEEAQQRAAAGLARAPLWIRGYEADPRLIQPARNNIERAGVADWVKIYQGELATFEP 303 Query: 297 PLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQ 356 KG G V+ NPPYGERL E +L+ L+ LG ++ GW+ +F+ +P+L + Sbjct: 304 RPDKGQAGLVICNPPYGERLGDEASLLYLYQNLGERLRQSCIGWSAGVFTGAPELGKRMG 363 Query: 357 LRADKQYKAKNGPLDCVQKNYHVAESTP-------------------DSKPAMVAEDYTN 397 +R+ KQY NG L C V ++ + + + N Sbjct: 364 IRSHKQYAFWNGALACKLLMIQVEPRQFVTGERGERNDDGQARAPSEPARLSEGGQMFAN 423 Query: 398 RLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQ 457 RL+KNL++ KWAR++ +ECYRLYDAD+PEY +AVD Y DWV VQEYA PK++D KA+ Sbjct: 424 RLQKNLRQLGKWARRDKVECYRLYDADMPEYALAVDIYGDWVHVQEYAAPKSVDPAKAQA 483 Query: 458 RLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDY 517 RLFD +AA LG+A ++V+K RERQ GK QY++ +G+FLEV E L VNLTDY Sbjct: 484 RLFDALAAIPQALGVAQERVVVKRRERQAGKKQYERQSSEGKFLEVGEGGVRLLVNLTDY 543 Query: 518 LDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWA 577 LDTGLFLDHR R + + + GK FLNLF YT +ATVHA GGARSTT+VD+S+TYL+WA Sbjct: 544 LDTGLFLDHRPMRLRIQKEAAGKRFLNLFCYTATATVHAARGGARSTTSVDLSKTYLDWA 603 Query: 578 ERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLA 637 RNL LNG + R RL+ +D + WLRE + Q++LIFIDPPTFSNSKRME FDVQRD + Sbjct: 604 RRNLSLNGFSDRQ-RLVHSDVMEWLREDDGQYELIFIDPPTFSNSKRMEGVFDVQRDQVE 662 Query: 638 LMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCW 697 L+ L GG + FSNN R F +D + +EIT +TL DFARN +IH W Sbjct: 663 LLDLAMARLAPGGVLYFSNNFRKFELDES--VQARYAVEEITGETLDPDFARNPKIHRAW 720 Query: 698 LIT 700 IT Sbjct: 721 RIT 723 >UniRef50_A1SX09 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Psychromonas RepID=RLML_PSYIN Length = 749 Score = 799 bits (2064), Expect = 0.0, Method: Composition-based stats. Identities = 371/749 (49%), Positives = 487/749 (65%), Gaps = 51/749 (6%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M S F TA+GL LL+ EL+ +G Q + GGV F+G Y+ +WSR ASR++L Sbjct: 1 MLSYFIPTAKGLAPLLEVELKEMGIENPQQMNGGVKFEGTLEQGYKVCLWSRFASRVLLK 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L E KV +DLYLG I W F+ TF++ FSG ND IRN+Q+GA+K+KDAIVD F Sbjct: 61 LSEFKVLDSMDLYLGCSNIPWETHFDVDKTFSIDFSGTNDEIRNTQFGALKIKDAIVDRF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + RPNV + DIR N L K+ A+I LDLSG LHLRGYR AG AP++ETLAA Sbjct: 121 RKHFDERPNVQKRDADIRFNGRLWKDKATIYLDLSGSPLHLRGYRTIAGEAPLRETLAAG 180 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 I+ RSGWQ G LLDPMCGSGTL+IEAAM+A + APG R +GF W +HD+ WQ +K Sbjct: 181 IIKRSGWQ-GEALLDPMCGSGTLVIEAAMMALNIAPGSLRETFGFEKWKKHDQECWQTLK 239 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 AQ R+ + + + FYGSD +I+ AR NA+ AG+GE+I F V D ++ P + Sbjct: 240 TSAQVYGRRAVNQCETRFYGSDLSKDMIEIARKNAQRAGVGEVIEFSVTDAKKVLPP-EE 298 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G +++NPPYGERL S I L++ LG K+ F GWNLS+F+ +LLSCL +RA Sbjct: 299 LETGMLITNPPYGERLGSFSDTITLYTELGYHFKDAFAGWNLSMFAMDTELLSCLGMRAG 358 Query: 361 KQYKAKNGPLDCVQKNYHVAEST------------------------------------- 383 K +K NGP++CV KNY ++ Sbjct: 359 KSFKFFNGPIECVLKNYRISPKRPAVEVEPVAPKKTNKETPEPINPWTMGQNESVVEAAI 418 Query: 384 -----------PDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAV 432 KPA+ AE++ NRL KNLK+ EKWA++EG+ECYRLYDADLPEYNVA+ Sbjct: 419 ENESELVFKEVQQIKPAIYAEEFANRLLKNLKQLEKWAKREGVECYRLYDADLPEYNVAI 478 Query: 433 DRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQ 492 DRYA+++++QEY PK I+ K R+R D+++ VL + +KLV+K RERQKG+ QY+ Sbjct: 479 DRYAEYIIIQEYRAPKEIETQKVRRRFLDVVSTVRYVLNLPDDKLVIKVRERQKGRQQYE 538 Query: 493 KLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSA 552 KL K + L V E A + VNL DYLDTGLFLDHR R ++G M+KGKDFLNLF YT +A Sbjct: 539 KLDTKKQSLVVHEGQAKMLVNLQDYLDTGLFLDHRPTRLLIGNMAKGKDFLNLFCYTATA 598 Query: 553 TVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLI 612 +VHA LGGA+STT+VDMS+TYL W E N NG+ G+ H IQ DC+ WL+ A+E +DLI Sbjct: 599 SVHAALGGAKSTTSVDMSKTYLAWGEDNFAENGIKGK-HEFIQQDCIKWLQHAHEMYDLI 657 Query: 613 FIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLG 672 FIDPPTFSNSKRM D FDVQ DH+AL+ + L G I+FSNNKRGF++D+D + LG Sbjct: 658 FIDPPTFSNSKRMNDVFDVQEDHVALLTSASQRLNKQGEIIFSNNKRGFKLDVDAIKALG 717 Query: 673 LKAQEITQKTLSQDFARNRQIHNCWLITA 701 ++I+Q ++ +DF RN++IH CW++T Sbjct: 718 FYIKDISQSSIPEDFRRNKKIHQCWILTK 746 >UniRef50_A4XWP8 Ribosomal RNA large subunit methyltransferase L n=7 Tax=Proteobacteria RepID=RLML_PSEMY Length = 725 Score = 788 bits (2035), Expect = 0.0, Method: Composition-based stats. Identities = 329/723 (45%), Positives = 443/723 (61%), Gaps = 26/723 (3%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 + + +GLE LL E LG E + V + + + Y+ +WSRLA+R++L L Sbjct: 5 YEIVLTCPKGLEGLLLEEARALGLEEAREQTAAVRGQAELEVAYRLCLWSRLANRVLLVL 64 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 + + +LY GV+A++W + P + AV FSG I NS +GA+KVKDAIVD Sbjct: 65 SRFSMNNAEELYEGVKAVDWRDHLEPAGSLAVEFSGHGSGIDNSHFGALKVKDAIVDRLR 124 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 RP++D+ PD+RV++ L + A ++LDLSG LH RGYR + G AP+KE LAAA+ Sbjct: 125 TAGGERPSIDKINPDLRVHLRLDRGEAVLSLDLSGHSLHQRGYRLQQGAAPLKENLAAAV 184 Query: 182 VMRSGWQ----PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 ++R+GW G L DPMCG GT LIEAA++A D AP L R RWGFS W H AIW+ Sbjct: 185 LIRAGWPRIAAEGGALADPMCGVGTFLIEAALMAADVAPNLKRERWGFSNWLGHVPAIWK 244 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 ++ AEA+ RA GLA G ++D R+IQ R N AG+ + + ++ Sbjct: 245 KLHAEAEQRAAAGLARPPLWIRGYEADPRLIQPGRNNVERAGLSDWVKIYQGELGSFEPR 304 Query: 298 LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 + G V+SNPPYGERL E +L+ L+ LG ++ GW ++F+ +P+L + L Sbjct: 305 PDQNQKGLVISNPPYGERLGDEASLLYLYQNLGERLRQACLGWEAAVFTGAPELGKRMGL 364 Query: 358 RADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVA-------------------EDYTNR 398 R+ KQY NG L C V + + + NR Sbjct: 365 RSHKQYSFWNGALACKLLLIKVQTEQFVTGERRTRTEDEPVAEASSQARLSEGGQMFANR 424 Query: 399 LRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQR 458 L+KNLK+ KWAR+EG+ECYRLYDAD+PEY +AVD Y DWV VQEYA P+++D KA+ R Sbjct: 425 LQKNLKQLGKWARREGVECYRLYDADMPEYALAVDLYRDWVHVQEYAAPRSVDPDKAQAR 484 Query: 459 LFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYL 518 L D +AA LG+A +++ +K RERQ G QYQ+ +G+F+EV+E L VNLTDYL Sbjct: 485 LLDALAAIPQALGVAQSRVAIKRRERQTGTKQYQRQAAQGQFMEVSEGGVKLLVNLTDYL 544 Query: 519 DTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAE 578 DTGLFLDHR R + + + GK FLNLF YT +ATVHA GGARSTT+VD+S+TYL+WA Sbjct: 545 DTGLFLDHRPLRLRIQREAAGKRFLNLFCYTATATVHAAKGGARSTTSVDLSKTYLDWAR 604 Query: 579 RNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLAL 638 RNL LNG + + HRL Q D +AWL E ++DLIFIDPPTFSNSKRME FDVQRDH+ L Sbjct: 605 RNLSLNGFSDK-HRLEQGDVMAWLAEDRGEYDLIFIDPPTFSNSKRMEGVFDVQRDHVEL 663 Query: 639 MKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWL 698 + L GG + FSNN R F++D +A+ + +EI+ +TL DFARN +IH W Sbjct: 664 LDLAMARLAGGGVLYFSNNFRKFQLDESLVAR--YQVEEISAQTLDPDFARNPKIHRAWR 721 Query: 699 ITA 701 TA Sbjct: 722 FTA 724 >UniRef50_B4RZ48 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Alteromonas macleodii RepID=RLML_ALTMD Length = 699 Score = 786 bits (2029), Expect = 0.0, Method: Composition-based stats. Identities = 322/704 (45%), Positives = 451/704 (64%), Gaps = 10/704 (1%) Query: 1 MNSLFASTARGLEELLKTELENLG-AVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIML 59 MN++ +T+RGL+ELLK E+ L + + G + F+G Y+ +WSRLA+R++ Sbjct: 1 MNTILVTTSRGLDELLKQEVLTLCPDAQIKQGPGTIQFEGSKEDAYKLCLWSRLANRVIW 60 Query: 60 PLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDA 119 L K LY I+W + T +V F G N I+N+Q+GA++VKDAIVD+ Sbjct: 61 VLASGKAGDAEALYNTAMGIDWQMQMDSRHTLSVQFIGTNFAIKNTQFGAVRVKDAIVDS 120 Query: 120 FTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAA 179 F + LPRP+V+R PDI V LH++ + +DL+G LH R YR G AP+KE +A+ Sbjct: 121 FVEQGLPRPSVERKTPDISVYARLHRDNVILGIDLAGASLHQRAYRQETGDAPLKEHIAS 180 Query: 180 AIVMRSGW--QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 A++MRSGW PL+D MCGSGT+ IEAA +A + APG+ R WGF+ W H+ +W Sbjct: 181 AMLMRSGWTENTDAPLVDLMCGSGTIAIEAAYIARNIAPGIKRSYWGFTKWLGHEATLWD 240 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 + +A + + Y D +++ A+ NA AG+ I+F +D + + P Sbjct: 241 SLLEDAISVQKPS---CGGGIYAGDFSRKMVAIAKANADFAGVFNDISFSQQDATKSSPP 297 Query: 298 LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 + G V+SNPPYGERL +LI L S G+ K + GW++SL S++ DLL L+L Sbjct: 298 V--ATPGYVVSNPPYGERLGELTSLIPLFSDWGKRFKEAWKGWHVSLLSSNRDLLRVLKL 355 Query: 358 RADKQYKAKNGPLDCVQKNYH-VAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIE 416 RA K Y NG L+C NY ++T ++ NRL+KNLK+ + W + Sbjct: 356 RATKDYAMNNGKLECRLANYVLDEQNTVQFSEDAGNHEFANRLKKNLKRMKGWVKSANTN 415 Query: 417 CYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNK 476 CYR+YDADLP+YNVAVDRY DW+VVQEYAPPKT+ KAR+RL +++ +V G++P Sbjct: 416 CYRIYDADLPDYNVAVDRYGDWLVVQEYAPPKTVSEDKARKRLQEVLLHLPAVTGVSPKN 475 Query: 477 LVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQM 536 + LK R +QKG QY+K+ + GE +EV E A VNLTDYLDTGLFLDHR R+ + + Sbjct: 476 IALKVRAQQKGSKQYEKINQSGEMMEVFENGARFLVNLTDYLDTGLFLDHRNTRQKVKAL 535 Query: 537 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQA 596 S+GKD LNLFSYTGS +V A +GGA+S TTVDMS TYL+WA++N+ LN L+G H IQA Sbjct: 536 SQGKDVLNLFSYTGSVSVFAAMGGAKSVTTVDMSNTYLDWAKKNVALNKLSG-PHAFIQA 594 Query: 597 DCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSN 656 DC WL ++DLIFIDPP+FSNSKRM++ +DVQRDH+ ++ D K L+ GTI+FSN Sbjct: 595 DCTTWLGTHKGKYDLIFIDPPSFSNSKRMQNTWDVQRDHVKMLTDAKACLKEQGTIIFSN 654 Query: 657 NKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLIT 700 NKRGF++D + LGL+ + IT++T+ +DFAR +IH CW++ Sbjct: 655 NKRGFKLDETAVTALGLQVENITKETIPEDFARKGKIHQCWVLR 698 >UniRef50_A6VW36 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Marinomonas RepID=RLML_MARMS Length = 721 Score = 778 bits (2009), Expect = 0.0, Method: Composition-based stats. Identities = 296/709 (41%), Positives = 444/709 (62%), Gaps = 12/709 (1%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + +L + GLE +L+ EL G + ++ + V D +Y++ +WSR+A+R+MLP Sbjct: 14 VYALEITCPLGLENVLEKELHGEGLTQTRLGEAQVKLTTDLEGMYKACLWSRVATRVMLP 73 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + K+ S DLY GV+AI W++ N T A+ G N IRN+Q+GA++ KDAI D F Sbjct: 74 IANFKMESADDLYDGVKAIQWSDHMNASNTIAIDCHGTNHHIRNTQFGAVRAKDAIADYF 133 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + RP+V+++ P++R+ + + +E ++++DLSG+ +H RGYR + G+AP+KE LAA Sbjct: 134 VALSGERPSVEKEQPEVRIALRIKREVVTVSIDLSGESMHRRGYRQQGGMAPLKENLAAG 193 Query: 181 IVMRSGWQPG---TPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 +++R+GW T L+DPMCGSGT L+EAAM++ D APGL R WGF GW QHD +WQ Sbjct: 194 LLLRAGWGTDCGLTQLIDPMCGSGTFLVEAAMMSLDMAPGLRRPYWGFKGWKQHDHRMWQ 253 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 ++ A+ R +K A F G+D + + I AR N + AG+ ++I + + Sbjct: 254 QLMDFAKNR-KKDPATLGIRFQGTDREQKAIAAARENIKRAGLTDVIDVTMSSFQEHEFD 312 Query: 298 LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 + G +++NPPYGER+ E ALIAL+ LG + GW + +++ L + + Sbjct: 313 INPDAPGLLITNPPYGERIGDEMALIALYRQLGEWVVTHVRGWQFMMLTSNDHLARQIPV 372 Query: 358 RADKQYKAKNGPLDCVQKNYHV------AESTPDSKPAMVAEDYTNRLRKNLKKFEKWAR 411 R +K + NG ++C + + + S A+ + NRL+KN KK +KW Sbjct: 373 RPEKSTRVINGGIECRAYQFPLLAGSIKEDVVAQSVMTPGAQMFANRLQKNAKKLKKWVE 432 Query: 412 QEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLG 471 + I+CYR+YDAD+PEY+VA+D Y +W VQEY PK+ID KA+QRLF++++A + L Sbjct: 433 KNKIQCYRVYDADMPEYSVAIDIYGNWAHVQEYQAPKSIDPEKAKQRLFEVMSAIPTALN 492 Query: 472 IAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARR 531 I+ + ++LK R+RQ GK QY+K + + V EY VNL DYLDTGLFLDHR R+ Sbjct: 493 ISESNVILKQRQRQTGKEQYEKFDQTKHEMIVEEYGCEFIVNLKDYLDTGLFLDHRPVRK 552 Query: 532 MLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAH 591 ++ + G FLNLF YT +A+VHAG GGARS+ +VDMS TY EWA RN+ LN + R H Sbjct: 553 LIQDKANGVRFLNLFCYTATASVHAGQGGARSSLSVDMSNTYTEWARRNIELNEFSDRYH 612 Query: 592 RLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGT 651 ++ +ADC+ WL+++ ++FDLIF+DPPTFSNSK+M D D+QRDH L++ L GG Sbjct: 613 QVERADCIEWLKQSRDKFDLIFMDPPTFSNSKKMADILDIQRDHGELVRLAMARLARGGE 672 Query: 652 IMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLIT 700 ++FSNN R F +D + + IT++TL DF RN +IH C++I Sbjct: 673 LIFSNNYRRFVLDE--ALEQEYDVKNITRETLDPDFDRNDKIHQCYIIK 719 >UniRef50_C0N217 Putative RNA methylase family UPF0020 n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N217_9GAMM Length = 734 Score = 770 bits (1990), Expect = 0.0, Method: Composition-based stats. Identities = 309/732 (42%), Positives = 426/732 (58%), Gaps = 34/732 (4%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 + ARG+ LL EL+ LG + G + F G+ Y+ +WSR+A R+++P+ Sbjct: 5 YKFTVTAARGMLPLLADELKQLGIKNSKQEAGNIRFTGELEDAYKVCLWSRVAIRVLMPI 64 Query: 62 GECKVYSDLDLYLGVQAINWTEMF-NPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + LY GV+A+ W E +T AV F+ I++SQYGA KVKDAIVD F Sbjct: 65 AHLNAETPEQLYDGVKALAWEEHINAEDSTLAVDFNSFRSKIKHSQYGAQKVKDAIVDRF 124 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + RP+VD PD+R+NV++ A +++DLSG+ LH RGYR AP+KE LAAA Sbjct: 125 REQTGLRPSVDLFQPDLRINVYVKHNQAIVSIDLSGESLHKRGYRTHNTAAPLKENLAAA 184 Query: 181 IVMRSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 I++++ W + G L+DPMCGSGT LIEAAM+A D APG+ R +GFS W QHD W Sbjct: 185 ILLKAEWPRLAKQGWALVDPMCGSGTFLIEAAMIAADIAPGIARDYFGFSFWKQHDRECW 244 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 + +KA+A+ R + GLA G D+D++ + AR N AG+ E I + + + Sbjct: 245 KRLKADAERRRQAGLARLPV-MLGGDNDSKAVLAARENIAEAGLAERIQVHERSLLDWPS 303 Query: 297 PLPKGP-YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCL 355 P G ++ NPPYGER+ L L+ LG ++ GW +L + + L Sbjct: 304 VSRDLPNVGLMVCNPPYGERIGQRDELHHLYESLGNVIHEFLPGWRTALITDNAQLGKFT 363 Query: 356 QLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAM----------------------VAE 393 L NGP+ C Y + ++ Sbjct: 364 GLTMFDTVPFDNGPIPCDVLFYRAPKPVRSTEMLHASSLTDEDSEAVADATKVTITEQGR 423 Query: 394 DYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAH 453 + NRL KN+K KWAR+ + CYR+YDADLP+Y A+D Y ++V VQEYAPPK ID Sbjct: 424 MFANRLMKNIKHLAKWARKNELSCYRVYDADLPDYAFAIDLYGEYVHVQEYAPPKQIDPQ 483 Query: 454 KARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVN 513 KA +RL + + VL + N++VLK R++Q+G QY+ + EV E WVN Sbjct: 484 KAVERLKEAMQLIPEVLDLPSNQVVLKVRQKQRGTQQYEVQSSHNQRFEVAENGLKFWVN 543 Query: 514 LTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTY 573 LTDYLDTGLFLDHR R++L Q + GKDFLNLFSYTGSATV+A G A+STT+VDMS TY Sbjct: 544 LTDYLDTGLFLDHRDTRQLLLQKAAGKDFLNLFSYTGSATVYAAAGQAKSTTSVDMSNTY 603 Query: 574 LEWAERNLRLNGLTGRAHRLIQADCLAWL---REANEQFDLIFIDPPTFSNSKRMEDAFD 630 L WA+ N+RLN L G H ++A+CL WL ++ ++F LIF+DPPTFSNS RME FD Sbjct: 604 LAWAQDNMRLNQLNGEQHHFVRANCLEWLQAAQQEQQRFGLIFLDPPTFSNSSRMEGVFD 663 Query: 631 VQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARN 690 +QRDH++L+K LL G ++FS N+R F++ +D L+ L +ITQ TL +DF RN Sbjct: 664 IQRDHVSLLKMTSHLLTDDGCLIFSTNRRDFKLAVDELSD--LDISDITQSTLPKDFERN 721 Query: 691 RQIHNCWLITAA 702 +IH CW+I A Sbjct: 722 NKIHYCWMIRRA 733 >UniRef50_Q3KFC5 Ribosomal RNA large subunit methyltransferase L n=23 Tax=Bacteria RepID=RLML_PSEPF Length = 756 Score = 768 bits (1984), Expect = 0.0, Method: Composition-based stats. Identities = 322/754 (42%), Positives = 429/754 (56%), Gaps = 57/754 (7%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 LF + +GLE LL E LG E + V Y+ +WSRLA+R++L L Sbjct: 5 FELFLTCPKGLEGLLIEEAVGLGLEEAREHTSAVRGMATMETAYRLCLWSRLANRVLLVL 64 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 + + DLY GV ++W + T AV FSG I N+ +GA+KVKDAIVD Sbjct: 65 KRFPMKNAEDLYHGVLDVDWQDHMLADGTLAVEFSGHGSGIDNTHFGALKVKDAIVDKLR 124 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 RP++D+ PD+R+++ L + A ++LDLSG LH RGYR + G AP+KE LAAAI Sbjct: 125 TPQGDRPSIDKLNPDLRIHLRLDRGEAILSLDLSGHSLHQRGYRLQQGAAPLKENLAAAI 184 Query: 182 VMRSGWQ----PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 ++RSGW G L DPMCG GT L+EA M+A D AP L R +WGF+ W H A+W+ Sbjct: 185 LIRSGWPRIAAEGGALADPMCGVGTFLVEAGMIAADMAPNLRREQWGFTAWLGHVPALWK 244 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 ++ EA RA GLA+ G ++D R+IQ R N AG+ E I +VA Sbjct: 245 KLHEEAVERAAAGLAKPPLWIRGYEADPRLIQPGRNNVERAGLSEWIKIYQGEVATFEPR 304 Query: 298 LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 + G V+ NPPYGERL E +L+ L+ LG ++ W ++F+ +PDL + + Sbjct: 305 PDQNQKGLVICNPPYGERLGDEASLLYLYQNLGERLRQACLNWEAAVFTGAPDLGKRMGI 364 Query: 358 RADKQYKAKNGPLDCVQK------------------------------------------ 375 R+ KQY NG L C Sbjct: 365 RSHKQYSFWNGALPCKLLLIKVLPDQFVTGERRTPEQRQAEREQAAYDQTPNEPQERKFN 424 Query: 376 --------NYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE 427 A + + + + NRL+KNLK KW ++EGI+CYR+YDAD+PE Sbjct: 425 KNGNPIKPTPAPAPVIEQPRLSEGGQMFANRLQKNLKAMSKWVKREGIDCYRVYDADMPE 484 Query: 428 YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKG 487 Y +A+D Y DWV VQEYA PK+ID KA R+FD +AA L I +++V+K RERQ G Sbjct: 485 YAMAIDLYHDWVHVQEYAAPKSIDPEKASIRMFDALAAIPQALNIDKSRVVVKRRERQSG 544 Query: 488 KNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFS 547 QY++ +G+F EVTE L VNLTDYLDTGLFLDHR R + + + GK FLNLF Sbjct: 545 TKQYERQAAQGKFNEVTEGGVKLLVNLTDYLDTGLFLDHRPMRMRIQKEAAGKRFLNLFC 604 Query: 548 YTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANE 607 YT +A+VHA GGARSTT+VD+S+TYL+WA RNL LNG + + RL Q D +AWL E Sbjct: 605 YTATASVHAAKGGARSTTSVDLSKTYLDWARRNLSLNGFSDKN-RLEQGDVMAWLENCRE 663 Query: 608 QFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDG 667 ++DLIFIDPPTFSNSKRME FDVQRD + L+ L +GG + FSNN R F+++ + Sbjct: 664 EYDLIFIDPPTFSNSKRMEGIFDVQRDQVQLIDLAMARLASGGVLYFSNNFRKFQLEDNL 723 Query: 668 LAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 + +EIT T+ DFARN +IH W ITA Sbjct: 724 AER--YAVEEITASTIDPDFARNGKIHRAWKITA 755 >UniRef50_Q47Z09 Ribosomal RNA large subunit methyltransferase L n=1 Tax=Colwellia psychrerythraea 34H RepID=RLML_COLP3 Length = 715 Score = 766 bits (1979), Expect = 0.0, Method: Composition-based stats. Identities = 329/710 (46%), Positives = 452/710 (63%), Gaps = 11/710 (1%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 A T+ G+E LL E+++LGA GV+F+ L Y+ +W+RLA+RIML L Sbjct: 6 QQFLALTSPGIEVLLFDEIKSLGAFNVIQKPEGVYFQASLALGYKISLWTRLATRIMLKL 65 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 GE + +L+ +INW ++F TFAV F G ++ IRNSQ+G + +KDAIVD F Sbjct: 66 GEGEAKDKDELFKAASSINWPDIFKSTTTFAVDFVGYSEEIRNSQFGGLTIKDAIVDQFR 125 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 + RPNVD+ AP I L ++ +I LD SG GL RGYR+ +G AP+KE LAAA+ Sbjct: 126 DQGFERPNVDKKAPQISFQARLLRDNVTIFLDFSGRGLFQRGYREHSGAAPLKENLAAAL 185 Query: 182 VMRSGW--QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 ++RSGW PL+DPMCGSGT+LIEA +A +AP ++R WGF W HD A+WQ+ Sbjct: 186 IIRSGWLNDTSKPLVDPMCGSGTILIEAVSMAAKQAPAINRQSWGFEAWLSHDNAVWQKQ 245 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 A + + ++ +G D D RV++ A+ NAR A + + I F K+ + N Sbjct: 246 LTLAIDSSEENMSNLKVKVFGIDIDERVLRTAQQNARNAQLHQYIEFTCKNTNDMDNTF- 304 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 G GT+L NPPYGER+ P L+ L G+ +K QF W +++ +A+ DLLS L+L + Sbjct: 305 -GQPGTILFNPPYGERIGELPELVENFVLFGQKLKMQFKDWRIAILTANVDLLSMLKLSS 363 Query: 360 DKQYKAKNGPLDCVQKNYHVAEST-------PDSKPAMVAEDYTNRLRKNLKKFEKWARQ 412 K+YK KNGPLDC Y++ P S A + NRL+KN K + W + Sbjct: 364 FKRYKFKNGPLDCQLALYNLDAKQGAKDAINPQSDFAEEDSAFANRLKKNRKNLKGWLKS 423 Query: 413 EGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGI 472 IE YRLYD D+PEYNVA+D Y +++V+QEYA PKTI+ KA++RL ++I VL I Sbjct: 424 NEIEAYRLYDGDIPEYNVAIDIYGEYLVIQEYAAPKTIEEDKAKKRLQEVIYWAPKVLNI 483 Query: 473 APNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRM 532 +K++LKTR +Q+G NQY++L + + L + E+ A +NL DYLDTGLFLDHR R++ Sbjct: 484 PTDKVILKTRAKQRGANQYERLEKTKQSLTINEHGALFKINLWDYLDTGLFLDHRKTRQI 543 Query: 533 LGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHR 592 + + S+GK LNLF+YTGS +V A + GA S TTVDMS TYL WAE N LN L G ++ Sbjct: 544 VAKKSQGKSLLNLFAYTGSVSVQAAVQGAASITTVDMSNTYLNWAEDNFALNKLNGHKYQ 603 Query: 593 LIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTI 652 IQADCL WL++ +FD+IFIDPPTFSNSKRMED+FDVQRDH+ L+ D + L GG I Sbjct: 604 FIQADCLDWLKKNVNKFDVIFIDPPTFSNSKRMEDSFDVQRDHVDLITDALKSLNRGGEI 663 Query: 653 MFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITAA 702 F+NNKR F++D + L +LGL A+ ++ T +DFARN+ IHN W I Sbjct: 664 FFTNNKRNFKIDFEALDELGLTAEAMSDVTRDKDFARNKHIHNSWSIKRT 713 >UniRef50_A6VMR3 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Gammaproteobacteria RepID=RLML_ACTSZ Length = 676 Score = 765 bits (1977), Expect = 0.0, Method: Composition-based stats. Identities = 414/716 (57%), Positives = 520/716 (72%), Gaps = 57/716 (7%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M LFA+ ARG EELLKTEL LGA + ++ QGGVHF D Y++L+WSRLASRI+LP Sbjct: 1 MKPLFATCARGFEELLKTELTELGAQDVRIAQGGVHFGADDETQYKTLLWSRLASRILLP 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + + K+YSDLDLY V + W E F+ F V F+G N IR+SQ+GAM+VKD IVD F Sbjct: 61 IAQSKIYSDLDLYSTVVSQAWLEHFDERTHFFVDFNGTNREIRHSQFGAMRVKDGIVDYF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 R RPNVD++ PD+R++ +L+++ ++LDLSG+ LH+RGYR+ +G AP++ETLAAA Sbjct: 121 ERHGKARPNVDKENPDVRIHAYLNRDDLILSLDLSGEALHMRGYREDSGQAPLRETLAAA 180 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +V+RSGWQ GTPL+DPMCGSGTLLIEAA + AP LHR WGF W H++A+W++VK Sbjct: 181 LVLRSGWQKGTPLVDPMCGSGTLLIEAAQMEAQIAPQLHRSHWGFDFWKGHNQAVWEKVK 240 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 AEA A + + NPL Sbjct: 241 AEAVALAEAQMEK------------------------------------------NPLRN 258 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G GTVL NPPYGERL + PALIAL+S+ G+ +K QFGGWN+S+FS+ LL CL++R+ Sbjct: 259 GEKGTVLCNPPYGERLGTTPALIALYSVFGQRLKQQFGGWNVSVFSSEQGLLDCLRMRSF 318 Query: 361 KQYKAKNGPLDCVQKNYHVAESTP---------------DSKPAMVAEDYTNRLRKNLKK 405 +Q+KAKNGPLDCVQKNY +++ + DS VA D+ NRL+KN+KK Sbjct: 319 RQFKAKNGPLDCVQKNYRISDRSSVQTDERAAENPAVSADSAHTDVATDFANRLQKNIKK 378 Query: 406 FEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAA 465 EKWA+Q+G++ YRLYDADLP+YN+AVDRY D +VVQEYA PK ID +K RQRL D + A Sbjct: 379 IEKWAQQQGLDAYRLYDADLPDYNLAVDRYGDHIVVQEYAAPKNIDENKTRQRLLDAVTA 438 Query: 466 TISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLD 525 T++V G+ +KL+LK R +QKG NQY+KL KGE+ VTEY A LWVNLTDYLDTGLFLD Sbjct: 439 TLAVTGVETSKLILKVRRKQKGSNQYEKLANKGEYFYVTEYGAKLWVNLTDYLDTGLFLD 498 Query: 526 HRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNG 585 HR+ R+MLG+M+K KDFLNLF+YTGSATVHA LGGA+STTTVDMS TYL WAE+NL LN Sbjct: 499 HRLTRKMLGEMAKDKDFLNLFAYTGSATVHAALGGAKSTTTVDMSNTYLNWAEQNLILND 558 Query: 586 LTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRL 645 + G+ H+LIQADCL WL ++QFDLIF+DPPTFSNSKRMED++DVQRDH+ LMK+LKR+ Sbjct: 559 VDGKRHKLIQADCLQWLMRCDKQFDLIFVDPPTFSNSKRMEDSWDVQRDHIKLMKNLKRI 618 Query: 646 LRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 LR GTI+FSNNKRGF+MD DGLA+LGL A EI+ KTL DF RN+QIHNCWL+T Sbjct: 619 LRPNGTIVFSNNKRGFKMDFDGLAQLGLNALEISAKTLPLDFERNKQIHNCWLLTR 674 >UniRef50_Q1N650 Putative uncharacterized protein n=2 Tax=Oceanospirillaceae RepID=Q1N650_9GAMM Length = 738 Score = 762 bits (1969), Expect = 0.0, Method: Composition-based stats. Identities = 317/708 (44%), Positives = 440/708 (62%), Gaps = 30/708 (4%) Query: 21 ENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAIN 80 +LGA E ++ V + D +L Y++ +WSRLASR++ P+ E + S LY +++IN Sbjct: 33 TSLGASEVKLGVAFVACRADLQLAYKACIWSRLASRVLWPIAEGQGESAEALYDCIKSIN 92 Query: 81 WTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVN 140 W E F+ +F +HF+G + IRN+ +GA+K KDAI D F RP+V D PDI ++ Sbjct: 93 WIEHFSDRQSFKIHFTGKSPDIRNTHFGALKAKDAICDYFRELTGNRPDVS-DQPDIHIH 151 Query: 141 VWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGW-----QPGTPLLD 195 V LHK ++D +G+ LH RGYR G AP+KE LAAAIVMRSGW Q LLD Sbjct: 152 VRLHKGVIKTSIDFAGEPLHKRGYRQSQGAAPLKENLAAAIVMRSGWPSMMKQTEAALLD 211 Query: 196 PMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLA-EY 254 PMCGSGTLLIEAA++A + APGL R ++ W QH W+ VKA+AQ + + L E Sbjct: 212 PMCGSGTLLIEAALIAANIAPGLLRSQYAVERWKQHQRDEWRVVKADAQEKKEQALQTET 271 Query: 255 SSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGE 314 G D D RVIQ+A NA AG+ + F V+ +A G ++ NPPYGE Sbjct: 272 ELTLLGYDMDERVIQKAIQNAIRAGVQHYVHFSVQALADWRREKGLPDEGLIVCNPPYGE 331 Query: 315 RLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQ 374 RL E A+ AL++ +G K F GW +++F+ +P ++RADKQY+ NG + Sbjct: 332 RLSDEVAIGALYAAMGNKAKQFFPGWKMAIFTGNPQQAYQFKMRADKQYQMFNGAIPSKL 391 Query: 375 KNYHVAESTPDSKPAMVA------------------EDYTNRLRKNLKKFEKWARQEGIE 416 Y +++ + + NR++KNLKK ++A+++ Sbjct: 392 MVYGISKDSDKHFVESTEARSIESGDSANIKLNDGAQMVANRIKKNLKKIVRYAKKQKTN 451 Query: 417 CYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNK 476 CYR+YDAD+PEY VAVD Y DWV VQEYAPPK++D KA+ RL D++ A L + + Sbjct: 452 CYRVYDADMPEYAVAVDVYGDWVHVQEYAPPKSVDPEKAQNRLRDVLDALPVALNVDRER 511 Query: 477 LVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQM 536 + LK R+ QKGK QYQK+ E+ F EV E + +VN+TDYLDTGLFLDHR R + + Sbjct: 512 IALKQRQVQKGKKQYQKVDEQASFFEVQEGSCRFYVNMTDYLDTGLFLDHRPIRTDIETL 571 Query: 537 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQA 596 +KGKDFLNLFSYT +A+VHA +G ARSTT+VDMS+TYL W RNL LNG+ + H IQA Sbjct: 572 AKGKDFLNLFSYTCTASVHAAVGEARSTTSVDMSQTYLNWGRRNLTLNGIAEKYHHFIQA 631 Query: 597 DCLAWLRE---ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIM 653 DC+ WL++ +++FDLIF+DPP+FSNSKRM DVQRDH+ L++ LL+ G ++ Sbjct: 632 DCMQWLKDVQSESKRFDLIFMDPPSFSNSKRMIGVLDVQRDHVELIELAMGLLKPNGILI 691 Query: 654 FSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 FSNN + F++D D L K + +++ KT+ DF RN +IH C+ I+A Sbjct: 692 FSNNLKRFKLDFDALNK--FEVIDVSAKTIPDDFTRNAKIHQCFQISA 737 >UniRef50_Q60AX5 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Gammaproteobacteria RepID=RLML_METCA Length = 738 Score = 761 bits (1966), Expect = 0.0, Method: Composition-based stats. Identities = 331/734 (45%), Positives = 427/734 (58%), Gaps = 41/734 (5%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 FA+ +GLE LL EL+ LGA + + GV F+G Y+ +WSRLA+RI++ L Sbjct: 6 DFFATAPKGLEPLLVRELDGLGAESIKETRAGVEFRGTLETAYRVCLWSRLANRILMSLD 65 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + LY GVQ +W F PGAT AV FS I ++ +GA KVKDAI D F Sbjct: 66 RFAAATPEALYDGVQRTDWGRHFGPGATLAVDFSSRRSAITHTLFGAQKVKDAIADQFLE 125 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 RP+V + PDIR+NV L + A I LDLSGD LH RGYR AG AP+KE LAAA++ Sbjct: 126 HCGRRPSVRLERPDIRINVHLDADQAVIGLDLSGDSLHRRGYRTEAGPAPLKENLAAAVL 185 Query: 183 MRSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 +R+GW G L+DPMCGS TLLIE A+LA D APG R +GF W HD +W++ Sbjct: 186 IRAGWPDIAARGGSLIDPMCGSATLLIEGALLAADIAPGSFREYFGFLAWKGHDLELWRK 245 Query: 239 VKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 + EA+ RA GLA G D D R I A N AG+ I E K A + Sbjct: 246 LLTEARERAEAGLARLPP-ILGYDLDRRAIHLALDNIDRAGLRGRIHVERKVAADVRP-- 302 Query: 299 PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 KG G V+ NPPYGERL +LI ++ G ++ F GWN +L + + +L + +R Sbjct: 303 -KGRPGLVVVNPPYGERLGDVESLIPVYREFGETLQRHFRGWNAALLTGNFELAFQIGIR 361 Query: 359 ADKQYKAKNGPLDCVQKNYHVAESTPDSK-------------------------PAMVAE 393 A + + NG L+C + +A + PA +E Sbjct: 362 AGRYHTLYNGALECRLFLFDIAPERFFTPRSGVPETEGQKKLRQIVEKARRGAIPAEQSE 421 Query: 394 DYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD---WVVVQEYAPPKTI 450 + NRLRKNL+ WAR+ G+ CYRLYDADLPE+ VAVD Y WV VQEY P ++ Sbjct: 422 MFANRLRKNLRNLGTWARRNGVSCYRLYDADLPEFAVAVDIYQGEKLWVHVQEYEAPASV 481 Query: 451 DAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHL 510 D KA+ RL +A VL + ++ LK R RQKG QY K G+ F V E Sbjct: 482 DPAKAQSRLAGAVAMIPEVLEVPREQIFLKVRRRQKGDAQYVKQGQTAHFHVVEEGGWRF 541 Query: 511 WVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMS 570 WVN DYLDTGLFLDHRI R ++ Q+++ + FLNLF+YTG+ATV+A GGA STTTVDMS Sbjct: 542 WVNFEDYLDTGLFLDHRITRGLIQQVARDRHFLNLFAYTGTATVYAAGGGAASTTTVDMS 601 Query: 571 RTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA---NEQFDLIFIDPPTFSNSKRMED 627 TYL+WA RNL LNG R H IQADCL WL +A ++ LIF+DPPTFSNSKRM Sbjct: 602 HTYLDWAGRNLALNGFGERDHLRIQADCLDWLEQAVDRRRRYGLIFLDPPTFSNSKRMTG 661 Query: 628 AFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDF 687 +FD+QRD L+K + LL GG ++FS N+R FR+D L G +++++ TL +DF Sbjct: 662 SFDIQRDQGPLLKKVVSLLEPGGMLIFSTNRRRFRLDETAL--AGCAVEDVSRVTLPKDF 719 Query: 688 ARNRQIHNCWLITA 701 RN +IH CW I A Sbjct: 720 ERNPRIHACWRILA 733 >UniRef50_UPI0000E10BA2 23S rRNA m(2)G2445 methyltransferase n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E10BA2 Length = 722 Score = 760 bits (1962), Expect = 0.0, Method: Composition-based stats. Identities = 305/721 (42%), Positives = 443/721 (61%), Gaps = 23/721 (3%) Query: 1 MNSLFASTARGLEELLKTELENLG-AVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIML 59 M+ + +T+RGL+ LL+ E++ L V ++ G V G+ Y+ + SRLA+R++ Sbjct: 1 MHQILVTTSRGLDALLQDEIQQLCPGVSTKLAPGMVKVSGELSDAYRICLHSRLANRVLW 60 Query: 60 PLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDA 119 L ++ LY I+W F+ F V F+G +I N+Q+GA+++KDAIVD Sbjct: 61 VLVHAPCANEQALYSAANNIDWPSHFSHEDDFMVQFNGTTKSINNTQFGALRIKDAIVDR 120 Query: 120 FTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAA 179 F L RPNV + AP V+ LH++ +I +DLSG LH R YR G AP+KE +A+ Sbjct: 121 FVEDGLMRPNVSKLAPKFVVHARLHRDEVTICIDLSGKSLHQRHYRQTTGDAPLKEHVAS 180 Query: 180 AIVMRSGWQPGT------------PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSG 227 A++ RSG+ L DPMCGSGT+ IEAA++A + AP + R +WGF+ Sbjct: 181 AMLYRSGFVERVKQNQASDVPQSLVLADPMCGSGTIAIEAALIAQNIAPAIAREQWGFNH 240 Query: 228 WAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFE 287 W H WQ+++ +A +A+ ++ Y +D D ++++ A+ NA AG+ I F Sbjct: 241 WKHHSAQQWQQIR-DAALQAQTPASDTHVAIYANDLDRKLVRSAKANADEAGVFGDIIFS 299 Query: 288 VKDVAQL---TNPLPKGPYG----TVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGW 340 D + T P G +++NPPYGERL L+ + G +K F W Sbjct: 300 QTDALKWSVDTQPQQAIETGELTHFIVTNPPYGERLGELATLLPMFVKWGEQLKAHFANW 359 Query: 341 NLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMV-AEDYTNRL 399 ++S+ +++ +LL L+LR++K+Y NG L+C NY + ES + +D+ NRL Sbjct: 360 HVSMLTSNRELLRQLRLRSNKEYAMMNGKLECKCVNYQLNESNCTAVEQHSGQQDFANRL 419 Query: 400 RKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRL 459 +KNLK+ + + + +CYR+YDADLPEYN A+DRYADW+VVQEYAPPK I A KAR+RL Sbjct: 420 KKNLKRLKGFIQSNVTDCYRIYDADLPEYNCAIDRYADWLVVQEYAPPKDIPAEKARRRL 479 Query: 460 FDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLD 519 D++ + G++ +K+VLK RE+QKGK QY K + E + V E+ A +VNL DYLD Sbjct: 480 HDVLLQLPMLTGVSTDKIVLKVREQQKGKAQYDKFNSQHERIIVQEHGAQFYVNLHDYLD 539 Query: 520 TGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAER 579 TGLFLDHRI R+ Q +G LNLFSYTGS +VHA LG A S TTVDMS TYL+WA+ Sbjct: 540 TGLFLDHRITRQRFAQDVQGMRVLNLFSYTGSVSVHAALGKAASVTTVDMSNTYLDWAKD 599 Query: 580 NLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALM 639 N RLN L G + Q DCL+W++ ++Q++ IFIDPP+FSNSKRM +DVQRDH++L+ Sbjct: 600 NFRLNQLRG-GYDFQQGDCLSWIKHHSKQYERIFIDPPSFSNSKRMSKTWDVQRDHVSLI 658 Query: 640 KDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 +D L GG I FSNN R F++D + L +G ++IT T+ +D+ RN +IH+CW++ Sbjct: 659 RDALGCLTRGGKIYFSNNLRSFKLDTEALQDMGFAVEDITAATIPEDYIRNPKIHHCWIL 718 Query: 700 T 700 T Sbjct: 719 T 719 >UniRef50_Q5X0J6 Ribosomal RNA large subunit methyltransferase L n=6 Tax=Legionella RepID=RLML_LEGPL Length = 707 Score = 757 bits (1955), Expect = 0.0, Method: Composition-based stats. Identities = 305/708 (43%), Positives = 427/708 (60%), Gaps = 19/708 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 SLF S A+GLE LL+ EL+ LG QV GV+ + ++Y +WSRLA+RI L L Sbjct: 3 YSLFISCAKGLEYLLEDELKGLGLHVTQVSPQGVYGEASLPVIYNLCLWSRLANRIQLIL 62 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 + ++ +W +F T A+ F G ++ IRN+ +GA VKD IVD F Sbjct: 63 FSGHAAKEQAVHQLCTDFHWQTVFTHDKTIAIEFHGASEQIRNTMFGAQIVKDGIVDHFR 122 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 R N RP+VD++ P I ++ L + +++ DL G LH RGYR +AG AP+KE +AAA+ Sbjct: 123 RLNGSRPSVDKEKPQILIHAHLKNDILTVSFDLVGYSLHQRGYRKKAGKAPLKENVAAAM 182 Query: 182 VMRSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 ++R+ W G L DP CGSGTL+IEAAM+A APGL R WA+H ++W+ Sbjct: 183 LLRAKWPELAAQGYGLHDPFCGSGTLVIEAAMMAAHIAPGLLRQDQSLQYWARHQSSLWE 242 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 +++ +A + + + G+D+D++V+ AR+NA AG+ L+ F L Sbjct: 243 KLRTQALQQVKP----LAVKLVGTDTDSKVVALARSNAERAGVLPLVEFNT---LSLNAC 295 Query: 298 LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 P G V+ NPPYGERL L+ L+ LG + + GW ++ ++SP L L L Sbjct: 296 RPGTKRGLVVCNPPYGERLGEVTQLVPLYQQLGTTLHTCYQGWQAAILTSSPVLAKALGL 355 Query: 358 RADKQYKAKNGPLDCVQKNYHVA-----ESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQ 412 RADKQY NGPL+C ++ ++TP++ + A+ NRL KN +KWAR+ Sbjct: 356 RADKQYTLYNGPLECKLYCLTLSAANKLKNTPNAPLSDNAQMLFNRLEKNRNHLQKWARK 415 Query: 413 EGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGI 472 I CYR+YDADLPEY A+D Y D+ V+QEYAPP +I HKA +R +++ LGI Sbjct: 416 NQITCYRIYDADLPEYAYAIDIYNDYAVLQEYAPPASIPVHKAEKRSLEMLQVVPRALGI 475 Query: 473 APNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRM 532 P KL++K R++QKG QYQK+G+ + VTE A L VNL DYLDTGLFLDHR+ R Sbjct: 476 HPEKLIVKQRKQQKGSEQYQKIGKTSQRQIVTEGKAKLIVNLYDYLDTGLFLDHRLMRLK 535 Query: 533 LGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHR 592 Q+ +G FLN F YT SA+VHA L GA TT VD+S+TYL WAE N RLN + H+ Sbjct: 536 FAQLEQGTRFLNCFCYTASASVHAALAGAL-TTNVDLSKTYLLWAEDNFRLNDINLSKHQ 594 Query: 593 LIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTI 652 +Q DC W++ ++FD+IF+DPP+FSNSKRM D D+QRDH++L+ RLL G + Sbjct: 595 FLQYDCKEWMKTTRDKFDVIFLDPPSFSNSKRMSDILDIQRDHVSLINMAMRLLNPDGVL 654 Query: 653 MFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLIT 700 FS N R F+ L+ + K Q+IT +T+ QDF RN +IH+C+ I Sbjct: 655 YFSTNLRQFK--LEPMLKEKYAVQDITPQTIDQDFKRNSKIHHCFKIV 700 >UniRef50_A0L8B5 Ribosomal RNA large subunit methyltransferase L n=1 Tax=Magnetococcus sp. MC-1 RepID=RLML_MAGSM Length = 722 Score = 756 bits (1953), Expect = 0.0, Method: Composition-based stats. Identities = 303/725 (41%), Positives = 418/725 (57%), Gaps = 26/725 (3%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M FA+TARGLE L EL+ +GA + GV F+GD + ++ +WSR+A+RI+L Sbjct: 1 MYRYFATTARGLEPALAAELKRMGAKSVRPASAGVGFEGDLEIGLRACLWSRVATRIILS 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L + V + LY V I W + + T +V G NDTIR++ +G K+KDA+VD Sbjct: 61 LKKIDVSTPEALYASVLEIPWEDHLDAEGTLSVDCIGTNDTIRHTNFGGQKLKDAVVDRI 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 K RP+V R+ PD+R+N+ + + +DLSG+GLH RGYR R G AP+KE LAAA Sbjct: 121 RDKKGSRPSVARERPDLRINLGIRGNEGRVGIDLSGEGLHRRGYRLRTGDAPLKENLAAA 180 Query: 181 IVMRSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHD--EA 234 ++ +GW+ G P +DPMCGSGTL IEAAM+A D APG R +GF W Sbjct: 181 LLYFAGWEEQARLGAPFVDPMCGSGTLPIEAAMMAGDIAPGSLRRYFGFRRWRGASGIAE 240 Query: 235 IWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQL 294 +WQ + E+ R + DSDA ++ A+ N A + I +DVA Sbjct: 241 LWQRLADESIERQNQAKMPI---IEAGDSDANMVHIAQANIEEAELEGHIRLHQRDVAAW 297 Query: 295 TNPLPK-GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLS 353 G +++NPPYGERL L L + LG ++ GW + S Sbjct: 298 QKGADWPDRPGVLVTNPPYGERLGEVVELKGLFAKLGMLLNGPLLGWRSGVLMGDVLWQS 357 Query: 354 CLQLRAD-KQYKAKNGPLDCVQKNYHVAESTPDSK--------------PAMVAEDYTNR 398 + L ++ NGP+ C + +K A+ + NR Sbjct: 358 AMGLPQQGQRMDLNNGPIPCAYILHGTEPKPQAAKGAPAPKPGLQQGVVSPENAQMFANR 417 Query: 399 LRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQR 458 L+KN K+ +KW +E + CYRLYDAD+PEY +AVDRY +WVVVQEY P +I A +R Sbjct: 418 LKKNQKRLKKWVTRENVRCYRLYDADMPEYALAVDRYEEWVVVQEYQAPSSIPDADAHRR 477 Query: 459 LFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYL 518 L D + VLG+ P ++V+K R+RQKG NQY K+ +G+ + V E + VNLTDYL Sbjct: 478 LQDACSVLPEVLGVPPERVVVKQRKRQKGYNQYDKMANRGQKVLVAEQGLNFEVNLTDYL 537 Query: 519 DTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAE 578 DTGLF DH RR + Q + + FLNLF YTG+ATVHA GGA +TT+VD+S TYLEWA+ Sbjct: 538 DTGLFPDHAPMRRRIQQEAANRRFLNLFCYTGTATVHAAAGGALTTTSVDLSNTYLEWAQ 597 Query: 579 RNLRLNGLTGR-AHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLA 637 RN+ LNG G HR I+A+C+ W+ ++ FDLIF+DPPTFSNSK M ++FD+QRD + Sbjct: 598 RNMELNGFKGEHQHRFIKANCMQWIATTDQTFDLIFLDPPTFSNSKSMLESFDIQRDQVT 657 Query: 638 LMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCW 697 L+ + RLL G + FS N++ F+++ D L+ L +EITQ+TL DF R IH CW Sbjct: 658 LIGGVARLLNPDGVLYFSTNRKKFKLEQDLLSAQNLHMEEITQQTLDPDFHREPPIHRCW 717 Query: 698 LITAA 702 IT A Sbjct: 718 RITCA 722 >UniRef50_Q6AQA5 Ribosomal RNA large subunit methyltransferase L n=1 Tax=Desulfotalea psychrophila RepID=RLML_DESPS Length = 722 Score = 756 bits (1952), Expect = 0.0, Method: Composition-based stats. Identities = 294/712 (41%), Positives = 422/712 (59%), Gaps = 18/712 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 + A+ A GLEEL++ E++ VE ++ +G V ++G Y++ +WSR +SRI+L L Sbjct: 14 YTFLANCALGLEELIEAEIKGFSGVEVELGKGTVQWQGSLETGYRACLWSRFSSRILLKL 73 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFS-GLNDTIRNSQYGAMKVKDAIVDAF 120 + +V S+ DLY +W + + TFA+ + + T+ +SQ+ A+++KD IVD F Sbjct: 74 SQFEVNSEDDLYQNSFTYDWHQHMSWKTTFAIDCTLSADATVGHSQFAALRIKDGIVDRF 133 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RP+V PD+R ++ + ++ LDLSG+ LH RGYR G+AP+KE LAA Sbjct: 134 KEDGDERPSVKTTQPDVRFHIHVSGNEGTLYLDLSGESLHKRGYRVAGGMAPLKENLAAG 193 Query: 181 IVMRSGWQPGT----PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 IV SGW L+DPMCG+GTLLIEAAM+ D APGL R +GF W QHD +W Sbjct: 194 IVALSGWPEKQEALPSLIDPMCGTGTLLIEAAMMFGDVAPGLARNYFGFLHWHQHDSQLW 253 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 Q + EA R GL + F G D+D V+ AR N AG+ E I + + L Sbjct: 254 QALLDEAVAREDAGLDKTWPSFQGYDADPVVVSSARKNIIRAGLDEFIQVKCSPLVHLGA 313 Query: 297 PLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQ 356 P G ++ NPPYGERL + L++ GRI + F GW++++F ++PDL + Sbjct: 314 PTD---RGMLICNPPYGERLSETEKVRQLYAAFGRIGRKHFAGWDVAVFISNPDLAESFR 370 Query: 357 LRADKQYKAKNGPLDCVQKNYHVAEST--------PDSKPAMVAEDYTNRLRKNLKKFEK 408 + +K+Y+ NG + C AE + A + NR +KNLKK+ K Sbjct: 371 VSWEKKYRLFNGTIACRLSTGVFAEEEENSFAWEIQQVEVQEDALQFANRFKKNLKKYLK 430 Query: 409 WARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATIS 468 WA++E I C+R+YD DL E+N++VD Y W+ VQEY PPKTID A +R + A Sbjct: 431 WAKKENISCFRVYDRDLQEFNLSVDLYEKWIHVQEYLPPKTIDPDLASRRFNIALRAIRE 490 Query: 469 VLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRI 528 +LG+ +++ +K R+RQKG QYQ+ G++ + +V E N + VN DYLDTGLFLDHR Sbjct: 491 ILGLRSDRVFIKKRQRQKGAGQYQQQGDRKKMHQVREGNCYFLVNFRDYLDTGLFLDHRP 550 Query: 529 ARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTG 588 R +G+ S GK FLNL+ YTG+A+VHA GGA STTTVD+S TYL+W E N LNG Sbjct: 551 IRLRIGRESLGKKFLNLYGYTGTASVHAAQGGAASTTTVDLSSTYLQWTEMNFSLNGFAE 610 Query: 589 RAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRA 648 HR ++ADC+ WL E E +D IF+DPPTFSN+++ FD+QRDH+ L+ R L Sbjct: 611 NNHRTVKADCIKWLAEETELYDTIFVDPPTFSNTQKANRVFDIQRDHIQLLTLAMRRLSP 670 Query: 649 GGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLIT 700 GG ++FS N R F +D + ++IT++++ DF+RN +IH CW Sbjct: 671 GGLLIFSTNFRRFILDEKLAEQ--FDVKDITRESIPLDFSRNEKIHFCWEFR 720 >UniRef50_C7RA96 Putative RNA methylase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RA96_KANKD Length = 718 Score = 753 bits (1945), Expect = 0.0, Method: Composition-based stats. Identities = 303/719 (42%), Positives = 418/719 (58%), Gaps = 24/719 (3%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +AS +G+E LL EL +LGA + + F+GD L Y++ + SRLA+RI L L Sbjct: 2 QFYASCPKGVEALLIDELTSLGATNLKEHPSHIVFEGDLELAYKACLHSRLANRIYLCLL 61 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHF-SGLNDTIRNSQYGAMKVKDAIVDAFT 121 + + S D+Y V I W+ F+ TF V + ND +R+S + A KVKDA+VD + Sbjct: 62 DEEFTSVDDMYQKVNGIEWSWHFDMQQTFVVDAIARKNDDVRHSGFAAQKVKDAVVDYYQ 121 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 + RP++D+D PD R++ ++ I +DL+G LH RGYR +G APIKE LAAA+ Sbjct: 122 ERFEQRPSIDKDNPDYRIHAIINGRQLKIGIDLAGRSLHQRGYRPISGRAPIKENLAAAL 181 Query: 182 VMRSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 ++R+GW + G DPMCG+GT+L+EA M+A D APGL + F W QHD +WQ Sbjct: 182 LIRAGWPELSKQGYSFHDPMCGTGTILVEAVMIACDMAPGLFNPTYSFENWKQHDAELWQ 241 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 A A+ + K ++ F GSDS + ++ A+ AG ELI +D+ + Sbjct: 242 TTIASARRQFNKNKLALNNRFIGSDSHRKSLELAKEVILNAGFDELIEVSQQDIRRPKLE 301 Query: 298 LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 K G +LSNPPY ERL E +I L+ G +K+ GW ++ + + + Sbjct: 302 AFKE-PGLLLSNPPYAERLGEEDEVIQLYRDFGDYIKSHCIGWQAAIITNEVSFAKAMGM 360 Query: 358 RADKQYKAKNGPLDCVQKNYHVAEST-------------PDSKPAMVAEDYTNRLRKNLK 404 R+ KQYK KNG +DC + V E D + A NR+ KN + Sbjct: 361 RSHKQYKFKNGAIDCQLYLFDVKEENFYKPFDPTVVNPDWDKNLSEGAVMLKNRMIKNQQ 420 Query: 405 KFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIA 464 + + + +Q + CYRLYDADLPEY+ A+D Y D V +QEYAPPK I A++RL +I+ Sbjct: 421 RLKSYLKQNDVTCYRLYDADLPEYSAAIDVYDDMVHIQEYAPPKDIPPKVAQRRLNEIVR 480 Query: 465 ATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFL 524 T +L I +++ LK R+RQKG +QYQK E+ +F V E +VNL YLDTGLFL Sbjct: 481 VTSGLLQIPESEIALKQRQRQKGDSQYQKHSEEEQFQVVHEQGLQFYVNLNRYLDTGLFL 540 Query: 525 DHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLN 584 DHR R+M+ + GK FLNLF+YTGS +V+A GGA+ TTTVDMSRTYL WA +N LN Sbjct: 541 DHRKTRKMIMAEANGKRFLNLFAYTGSVSVYAAKGGAK-TTTVDMSRTYLNWAVKNFGLN 599 Query: 585 GLTGRAHRLIQADCLAWLREA--NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDL 642 + H +Q+DCL WL EA +DLIF+DPPTFSNSKRM+ FDVQRD + L+ Sbjct: 600 SIPIYGHEFVQSDCLQWLDEAQGQRTYDLIFLDPPTFSNSKRMDVTFDVQRDQVELINQT 659 Query: 643 KRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 LL G + FSNN + F M+ + K QEIT +TL DF ++R H CWLI Sbjct: 660 MNLLDKKGKLYFSNNFKKFEMETE--LKEHFDVQEITARTLPSDFQKSRNHHRCWLIQH 716 >UniRef50_Q1YPL5 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YPL5_9GAMM Length = 705 Score = 747 bits (1929), Expect = 0.0, Method: Composition-based stats. Identities = 306/703 (43%), Positives = 412/703 (58%), Gaps = 21/703 (2%) Query: 16 LKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLG 75 L EL LGA + VHF G L Y++ +WSRLA+R+++PL + + LY Sbjct: 2 LAQELLALGAESTKETVAAVHFVGTRELAYRACLWSRLANRVLMPLHNFSLDEEDQLYQE 61 Query: 76 VQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAP 135 I W E F+ T A+ F G + + N+ YG+ +VKDA+VD R+ RPNVD P Sbjct: 62 CLDIPWEEHFSHEQTIAIDFIGTSRLVDNTMYGSQRVKDAVVDRIRREEGERPNVDTKNP 121 Query: 136 DIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGW----QPGT 191 DIR+ V HK +++LD+SG+ LH RGYR G APIKE LAAA++MR W + G Sbjct: 122 DIRIQVRQHKGQVTVSLDISGESLHRRGYRSGQGSAPIKENLAAALLMRCKWPEMMKNGA 181 Query: 192 PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 251 LLDPMCGS TL+IE AM+A D APGL R R+GF+ W QHD+ +WQ + EA+ R GL Sbjct: 182 ALLDPMCGSATLIIEGAMMAADIAPGLLRERYGFTDWKQHDQELWQSILDEAEQRKGAGL 241 Query: 252 AEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPP 311 F G D++ RV++ A N AG+ E I K + Q YG +L+NPP Sbjct: 242 EALDLDFRGYDANPRVLEFATLNIEKAGLDEHIRLAHKPIDQFGK--ATADYGLLLTNPP 299 Query: 312 YGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLD 371 YGERL L+ ++ LG +++ F GW ++F+ + +L L KQY+ NG + Sbjct: 300 YGERLGDLDGLVPVYQKLGAVLQKNFQGWKAAVFTGNVELGRETDLTPTKQYQLFNGTIP 359 Query: 372 CVQKNYHV------------AESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYR 419 C + + P + A+ NRL KN +K W + G+ CYR Sbjct: 360 CKLLVFEDLTSRSEKIEQRLNKPAPAQELTEGAKMVFNRLVKNQRKLNGWLNKTGVSCYR 419 Query: 420 LYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVL 479 +YDAD+PEY+VAVD Y D V VQEY PP TID AR+R ++ A A + Sbjct: 420 VYDADIPEYSVAVDIYEDSVHVQEYLPPNTIDDKVARERFAEVKQAVKEFAKDARGHIHY 479 Query: 480 KTRERQKGKNQYQKLGEKG-EFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSK 538 K R RQKG +QY++ E + + V E NA NL+DYLDTGLFLDHR RRM+ +++K Sbjct: 480 KERRRQKGDSQYERFNEGPSDTITVFEGNAQFEANLSDYLDTGLFLDHRPVRRMVSELAK 539 Query: 539 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADC 598 GK LNLF YT + +V A LGGA+ T ++DMS TYL+WA+RN LN ++ + H L++ADC Sbjct: 540 GKSLLNLFCYTAAVSVQAALGGAKRTLSIDMSNTYLDWAQRNYDLNNISAKNHHLLRADC 599 Query: 599 LAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 658 L WL EQFD+IF+DPPTFSNSK+M+ DVQRDH L+++ L G ++FSNN Sbjct: 600 LKWLETDGEQFDVIFLDPPTFSNSKKMDSILDVQRDHGDLIRNSMAKLAPDGVLIFSNNF 659 Query: 659 RGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 R F+MD L A+ IT +TL DF RN +IHN W IT Sbjct: 660 RKFKMDE--LVARQFNAENITPQTLDMDFERNPRIHNVWRITR 700 >UniRef50_A3JG83 Predicted methyltransferase n=1 Tax=Marinobacter sp. ELB17 RepID=A3JG83_9ALTE Length = 719 Score = 745 bits (1924), Expect = 0.0, Method: Composition-based stats. Identities = 302/707 (42%), Positives = 414/707 (58%), Gaps = 23/707 (3%) Query: 16 LKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLG 75 L EL+ G + GV +G Y++ +WSRLA+R++L + E SD +LY G Sbjct: 2 LADELDGFGLSLVRHAPAGVWVEGTLEGGYRACVWSRLANRVILHVAEVAATSDDELYDG 61 Query: 76 VQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAP 135 V ++W + +F V+F G N+ IRN+QYGA +VKD IVD FT RP V+ P Sbjct: 62 VVHLDWQQHIAVSGSFKVNFIGENEAIRNTQYGAQRVKDGIVDRFTANGGKRPAVEAKTP 121 Query: 136 DIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQP----GT 191 D+ V+ LH+ ++ +DLSG LH RGYR G AP+KE LAAA+++RSGW G Sbjct: 122 DVIVSARLHRGQLTLGIDLSGHSLHQRGYRAEQGQAPLKENLAAALLIRSGWPETVAAGG 181 Query: 192 PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 251 +DPMCGSGTLLIEAA++A D APG + +GF W HD +W ++ E + RA G Sbjct: 182 DFIDPMCGSGTLLIEAALMALDIAPGRRQDGFGFEKWLGHDAELWMSLRQEVERRAHAGK 241 Query: 252 AEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPP 311 G D D RV+ AR N + AG+ ++ + +L G V++NPP Sbjct: 242 QGRIPRIAGFDEDRRVLSTARNNLQRAGLDSIVELTEIPLQELELSGDWAEQGLVMTNPP 301 Query: 312 YGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLD 371 YGERL +L ++ LG +K W L +F+ +P+ + LR+ KQYK NG L Sbjct: 302 YGERLSERKSLAEIYQALGAAVKRVTPNWRLGVFTGAPEFGKSIGLRSFKQYKLFNGKLP 361 Query: 372 CVQKNYHVAESTPDSKPAMVAE--------------DYTNRLRKNLKKFEKWARQEGIEC 417 + V E++ A NRL+KN+K +WAR++ I C Sbjct: 362 AQLLLFTVDEASARIPKDPAAPGEILPRIANEERAAMLANRLKKNVKSIGQWARKQNISC 421 Query: 418 YRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKL 477 YRLYDAD+PEY +A+D Y DWV VQEY PKTID AR+RL + +A LGIA ++L Sbjct: 422 YRLYDADMPEYALAIDIYNDWVHVQEYMAPKTIDERAARERLSEALAVIPEALGIARDRL 481 Query: 478 VLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMS 537 V K R RQ G +QY+K GEF EV E+ L VNL DYLDTGLFLDHR R+ + Q + Sbjct: 482 VCKQRLRQTGTSQYEKQAASGEFFEVQEHGCTLKVNLKDYLDTGLFLDHRPLRQWIQQNA 541 Query: 538 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQAD 597 +GK FLNLF YTG+ATVHA GGA + ++DMS TY+ WA+ NL LN R H++ D Sbjct: 542 RGKRFLNLFCYTGAATVHAIAGGASRSLSLDMSHTYVSWAKDNLELNHADPRKHQVDAVD 601 Query: 598 CLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMF 654 CLAWL + +++FDLIF+DPPTFSNS +M D+Q+DH L++ + L G ++F Sbjct: 602 CLAWLASKPKPDQRFDLIFMDPPTFSNSAKMIGVLDIQKDHAKLIRQAMQRLTNDGLLVF 661 Query: 655 SNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 SNN R F++D + A+ +EI++ T+ +DF RN +IH CW I Sbjct: 662 SNNFRRFKLDDEVSAE--FAVEEISKSTIDKDFQRNPRIHRCWNIRH 706 >UniRef50_Q2SCH1 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Proteobacteria RepID=RLML_HAHCH Length = 717 Score = 737 bits (1904), Expect = 0.0, Method: Composition-based stats. Identities = 301/720 (41%), Positives = 420/720 (58%), Gaps = 22/720 (3%) Query: 1 MNSL--FASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIM 58 MN FAS +GLE +L EL+ LGA + GV K D Y+ + SRLA+R++ Sbjct: 1 MNEFSLFASCPKGLEYVLADELKTLGAEVLRTNPAGVEAKVDLAGAYRICLGSRLANRVL 60 Query: 59 LPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVD 118 L + + LY +NW+E PG ++ + G + IR+S++GA VKDAI D Sbjct: 61 RLLQSTRTATRDGLYQAASEVNWSEHLRPGESYWIAAFGSSGDIRHSRFGAQVVKDAIND 120 Query: 119 AFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLA 178 F ++L P +D+ + V + L K T ++ LDL+G LH RGYR AP+KE LA Sbjct: 121 HFRDRDLELPVIDKRSGVQTVQLNLAK-TITLGLDLAGRSLHQRGYRQEGAAAPLKENLA 179 Query: 179 AAIVMRSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEA 234 AAI+ R+GW +DPMCGSGTL++EAAM+A + APGL + F HD Sbjct: 180 AAILYRAGWPEICGEDGCFVDPMCGSGTLVVEAAMIAMNIAPGLLNPHFLFEKAPWHDPE 239 Query: 235 IWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQL 294 +W+ V EA +A G + +G D + I+ A+ N AG+ + E Sbjct: 240 VWRGVYEEAMEKAVLGKRRWRGAIFGCDLNPAAIRTAKRNLSRAGLDRWVKLETASAMDF 299 Query: 295 TNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSC 354 T ++ NPPYGERL E L +L+ LGR +K +G W +F++S +L Sbjct: 300 TPDTEGCGQRLLVCNPPYGERLGQELELRSLYRALGRRLKTAYGEWKAGIFTSSVNLAKE 359 Query: 355 LQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAE------------DYTNRLRKN 402 + LRADKQY NGPL + V + P+++ + + NRL KN Sbjct: 360 IGLRADKQYHLYNGPLATTLYLFDVYGNRPEAETPRKPQNASLEGISEQAQMFRNRLSKN 419 Query: 403 LKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDI 462 L K+ KWA+++ + YR+YDAD+PEY VA+D Y ++VQEYAPPK++D KARQRL D+ Sbjct: 420 LAKWSKWAKKQQLSAYRIYDADMPEYAVAIDWYDGGIIVQEYAPPKSVDEEKARQRLLDV 479 Query: 463 IAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGL 522 + T +VLGI +L LK R++QKG QY+K + V E+ WVNL+DYLD+GL Sbjct: 480 LEVTPAVLGIDGGQLFLKQRKKQKGMLQYEKTDSSRKERTVEEHGCRFWVNLSDYLDSGL 539 Query: 523 FLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLR 582 FLDHR R + + S GK FLNLF YTG+A+VHA GGA +TT+VDMS+TYL WAERN Sbjct: 540 FLDHRPTRYWIQKHSSGKRFLNLFCYTGAASVHAAAGGAATTTSVDMSQTYLSWAERNFH 599 Query: 583 LNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDL 642 LN L+G HR ++A+ L WL+ + +DLIF+DPPTFSNSK+MED D+QRDH L++D Sbjct: 600 LNKLSG-PHRFVRANVLDWLKAEHNSYDLIFLDPPTFSNSKKMEDVLDIQRDHAGLIEDC 658 Query: 643 KRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITAA 702 RLL GG ++FS N R F++D + + T ++ +DF RN +IH CW I + Sbjct: 659 MRLLAPGGVLIFSCNYRRFKLD--SGIEQRFAVENHTAASIPEDFKRNERIHQCWHIRHS 716 >UniRef50_Q21JW7 Ribosomal RNA large subunit methyltransferase L n=3 Tax=cellular organisms RepID=RLML_SACD2 Length = 752 Score = 730 bits (1884), Expect = 0.0, Method: Composition-based stats. Identities = 305/743 (41%), Positives = 422/743 (56%), Gaps = 45/743 (6%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 LF S ++G E LL+TELE L + + GV+ +Y+ +W+RLA++++LPL Sbjct: 12 YDLFVSCSQGWEGLLQTELEQLAVGDVKPGHAGVYVSATLEQMYKICLWTRLATKVLLPL 71 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 + + D++ ++W + PGA+ V F G ND +RN+Q+GA +VKDA+VD+ Sbjct: 72 DSGPIETGDDVHTVASKVDWPSLMKPGASLKVDFIGTNDAVRNTQFGAQRVKDAVVDSIR 131 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 RPNV++ PD+R++ LH++ I++DLSGD LH RGYR + G AP+KE LAAA+ Sbjct: 132 HAGGERPNVEKMQPDVRIHARLHRDELHISIDLSGDSLHRRGYRQKQGGAPLKENLAAAL 191 Query: 182 VMRSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 ++R+GW + G LLDPMCGSGTLLIE A++A APGL R ++GF W H+ W Sbjct: 192 LLRAGWPTIAEQGGALLDPMCGSGTLLIEGALIAYSIAPGLSRDKFGFECWTGHNADTWA 251 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 +V +A+ K L E S +G DSD V + A N G+ +I K V +L P Sbjct: 252 QVVNDAKAIRDKNLQEKSFDIFGYDSDYYVTKAAEMNCEALGLQNVIHIANKPVEELKQP 311 Query: 298 LPKG-PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQ 356 K G V+ NPPYGERL L + +L +K QF GW ++F+++P+L + Sbjct: 312 THKVLVPGLVIVNPPYGERLGEVNELRTTYQILAHQVKQQFEGWTFAVFTSNPELAKETR 371 Query: 357 LRADKQYKAKNGPLDCVQKNYH---------------------------------VAEST 383 LRA+K+ K KNG L Y V ++ Sbjct: 372 LRANKKNKFKNGALPAELFVYSVLSADDAKLRKDKLTQAVQTDEDGQVENASGAWVRKNL 431 Query: 384 PDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQE 443 D A NR++KNLK+ +K +Q YR+YDAD+PEY+ A+D Y D V +QE Sbjct: 432 CDKPLTEAATMVANRIKKNLKRLKKSVKQNDWHGYRVYDADMPEYSAAIDLYNDQVHIQE 491 Query: 444 YAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLG-----EKG 498 YA PKTIDA KA R + L NKL +KTR+R KGK QY+K + Sbjct: 492 YAAPKTIDADKAEARFETLKHGAAVALQAPDNKLFVKTRKRNKGKAQYEKQTDTQGFDAE 551 Query: 499 EFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGL 558 ++V E NA LWVNL DYLDTGLFLDHR R + + + GK FLNLF YT +A+V A L Sbjct: 552 RCIQVQEGNAKLWVNLQDYLDTGLFLDHRPLRMRIHKEATGKRFLNLFCYTATASVQAAL 611 Query: 559 GGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPT 618 GGA + +VDMS TYLEWA+ N RLN + HRL++ADC WL + E FDLI +DPPT Sbjct: 612 GGATESVSVDMSNTYLEWADNNFRLNNVHLARHRLVRADCFDWLNKCREGFDLIMLDPPT 671 Query: 619 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEI 678 FSNSK+M D D+Q+D + L+ +L GGT+ FS N R F++D + + I Sbjct: 672 FSNSKKMSDVLDIQKDQVRLISRCMDILNPGGTLYFSTNFRQFKLDEQISTR--YVVENI 729 Query: 679 TQKTLSQDFARNRQIHNCWLITA 701 + T+ +DF N +IH CW I Sbjct: 730 SAATIDEDFKGNPKIHYCWKIQH 752 >UniRef50_Q31IC8 Ribosomal RNA large subunit methyltransferase L n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=RLML_THICR Length = 734 Score = 729 bits (1883), Expect = 0.0, Method: Composition-based stats. Identities = 285/736 (38%), Positives = 424/736 (57%), Gaps = 38/736 (5%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M FA+ +GL ELL+ EL GA + G F GD + Y+S +WSRLA+RI L Sbjct: 1 MCRFFATAPKGLNELLREELTTFGAENIKTQPTGATFDGDLEVGYRSCLWSRLANRIYLV 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L E ++ + L VQ+I+W++ + TFAV FSG I +S YGA+K+KD IVD F Sbjct: 61 LLETELPNQEALSSVVQSIDWSKHIDKEGTFAVSFSGQGLGITHSHYGALKIKDGIVDYF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDR-AGIAPIKETLAA 179 RP++D + PDIRV+ L++ +++LDLSG LH RGYR+ AP+KE +AA Sbjct: 121 REHYQVRPSIDTEVPDIRVHGHLNRNQLTLSLDLSGYSLHQRGYREGIQVEAPLKENVAA 180 Query: 180 AIVMRSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRG-RWGFSGWAQHDEA 234 AI+MR+ W Q G DPMCGSGT L+EAA++A+D APG+ + + W HDE+ Sbjct: 181 AILMRANWPEIAQQGGAFYDPMCGSGTFLVEAALMASDTAPGVAKSGEMLLNYWLGHDES 240 Query: 235 IWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQL 294 +WQ++ EA+ R + GL + YGSD + + AR + + AG ++I + V Q Sbjct: 241 LWQKLVEEAEQREQVGLKHLP-NIYGSDISHKSLDVARNSIQAAGYDDVIEIKQMAVEQG 299 Query: 295 TNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSC 354 G ++ NPPYGERL E + ++ LG +K +F W ++ + +L Sbjct: 300 RKWGDW-SPGLIVCNPPYGERLGEEETVKQIYLKLGEYLKAEFIHWKAAILTCHTELGMF 358 Query: 355 LQLRADKQYKAKNGPLDCVQKNYHVAES--------------------TPDSKPAMVAED 394 L ++A + + NG + C + + E PD A+ Sbjct: 359 LGIKAKRSHDFFNGAMSCRLFRFEIEEEWFRQPALQPKQDLAEQVLQLQPDLADTDNAKM 418 Query: 395 YTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD-----WVVVQEYAPPKT 449 +NR+RKN+K + W +Q I YR+YDAD+PEY +A+D Y WVVV EYAPPKT Sbjct: 419 VSNRIRKNMKGLKSWVKQNDISAYRVYDADIPEYALAIDLYDTLESGLWVVVAEYAPPKT 478 Query: 450 IDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAH 509 ++ KA++RL++ ++ SV ++P ++V K R +QKG++QY++L E+ F + E Sbjct: 479 VNPTKAKRRLYEAMSVLPSVFNVSPERIVFKVRSQQKGQDQYERLDEQKAFFTIVENQTR 538 Query: 510 LWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDM 569 L VN TDYLDTG+FLDHR R+ + +++ GK LNLF YT +AT A G +S+ ++DM Sbjct: 539 LRVNFTDYLDTGIFLDHRQVRQEVAKLAAGKRLLNLFCYTATATAEAVKAGCKSSLSLDM 598 Query: 570 SRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR----EANEQFDLIFIDPPTFSNSKRM 625 S+TYL WA+ N N + + H L Q + L WL + FD+IF+DPP+FS SKRM Sbjct: 599 SKTYLYWAKHNFMCNDINEKQHVLQQENVLEWLETATQNPKDLFDVIFLDPPSFSTSKRM 658 Query: 626 EDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQ 685 + D+QRDH+ L++ +LL G ++FS N R F++D + + ITQ+T+ + Sbjct: 659 DGTLDIQRDHVDLIQKTLKLLSKDGKLIFSTNLRKFKLDKASFEP-DYQIENITQRTMPK 717 Query: 686 DFARNRQIHNCWLITA 701 D+ARN +IH WL + Sbjct: 718 DYARNMKIHQAWLFSR 733 >UniRef50_B0VAL5 Ribosomal RNA large subunit methyltransferase L n=16 Tax=Acinetobacter RepID=RLML_ACIBY Length = 734 Score = 726 bits (1875), Expect = 0.0, Method: Composition-based stats. Identities = 298/727 (40%), Positives = 415/727 (57%), Gaps = 29/727 (3%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 +N + + A GLE LL+ E+E LG + G + +G Y+ MWSRLASR++LP Sbjct: 7 LNHYWITCADGLETLLQEEIEQLGTKVTERKAGRLIIEGTLEHAYRICMWSRLASRVLLP 66 Query: 61 LGECKVYS-------DLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVK 113 + ++ +LY G + +W+ +F P +TFA+ + N+Q+ ++VK Sbjct: 67 IHTYELERTHDARDVAEELYEGAISFDWSLIFAPQSTFAIRLHAEREIKVNTQFATLRVK 126 Query: 114 DAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPI 173 D +VD+F RP++D P+I + V K + LDLSGD LH RGYR API Sbjct: 127 DGVVDSFMEAVGRRPSIDTKQPEITLYVLAGKTEHTYCLDLSGDSLHKRGYRRFMTDAPI 186 Query: 174 KETLAAAIVMRSGWQPGTP--LLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQH 231 KE LAAAI+ ++ Q P +LDPMCGSGT +IEA M+ TDRAPGL R R+GF+GW H Sbjct: 187 KENLAAAILQKAKLQERNPEIVLDPMCGSGTFIIEALMILTDRAPGLVR-RFGFNGWHGH 245 Query: 232 DEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIG---ELITFEV 288 D +W +KAEA R K L + FY D+D ++ R N AG I E Sbjct: 246 DRELWLSLKAEAAERHEKALEQPLPKFYAYDADWEAVKATRENIIAAGFEKLLGDIQIEE 305 Query: 289 KDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSAS 348 + +A + + +++NPPYGERL + + +L+ L +++ F ++ +A Sbjct: 306 RTLADWPDFGAENKTAFIVTNPPYGERLGDKASNRSLYLGLSALLQKNFPNQYAAIIAAQ 365 Query: 349 PDLLSCLQLRADKQYKAKNGPLDCVQK----------NYHVAESTPDSKPAMVAEDYTNR 398 + L A + + NG L + +A A+D+ NR Sbjct: 366 IEQADVLAFEAPETLRLMNGKLPIYVRFGTVKPEKVTQPFLANWQAQPVEMEEAQDFANR 425 Query: 399 LRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQR 458 L+KN+ +KWA +E I C RLYDADLP++N+AVD Y D + VQEYAPPK ID KA++R Sbjct: 426 LQKNMTALKKWATKENIYCLRLYDADLPDFNLAVDLYGDRLHVQEYAPPKKIDPEKAKKR 485 Query: 459 LFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYL 518 +AA +V G+ + + +KTR RQ G NQY K + V E A + VNLTDYL Sbjct: 486 FNLALAAIRAVTGLNRDAIFIKTRARQTGTNQYTKQSTANKRFIVQEGKAKILVNLTDYL 545 Query: 519 DTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAE 578 DTGLFLDHR R + Q ++GK FLNL+SYT +A++HA LGGA STT+VD+S TYL W++ Sbjct: 546 DTGLFLDHRQMRLRIAQEARGKHFLNLYSYTSTASLHAALGGAASTTSVDLSNTYLSWSK 605 Query: 579 RNLRLNGL----TGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRD 634 N LNGL H +DC WL+E +EQ+DLIFIDPPTFSNSK+ FDVQRD Sbjct: 606 ENFVLNGLTVDHADEQHMFFASDCFEWLKEGHEQYDLIFIDPPTFSNSKKFHGTFDVQRD 665 Query: 635 HLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIH 694 H++L+K L + GT+ FSNN RGF MD + + +EIT +T+ DF RN++IH Sbjct: 666 HVSLIKRAMNRLTSEGTLYFSNNYRGFEMDEE--IEALYDVEEITSETIGPDFKRNQKIH 723 Query: 695 NCWLITA 701 W I Sbjct: 724 RAWKIQH 730 >UniRef50_A4BHH9 Putative uncharacterized protein n=5 Tax=Proteobacteria RepID=A4BHH9_9GAMM Length = 713 Score = 726 bits (1874), Expect = 0.0, Method: Composition-based stats. Identities = 294/707 (41%), Positives = 409/707 (57%), Gaps = 12/707 (1%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 + + +G+ LLK E+ L GV F G + Y+ +WSRLA+R+ LG Sbjct: 8 RFWVTCPQGVHGLLKQEIATLTDASVGDWHKGVEFTGSLKDAYRVCLWSRLANRVYAALG 67 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 E S L V ++NW E P T V F+G IR++++GA KVKD +VD Sbjct: 68 ESHEVSFDALQALVSSVNWDEHLRPSGTLKVVFTGRLPEIRDTRFGAQKVKDWVVDQIRE 127 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 ++ RPNVD PD+ + + ++ + ++L+G+ LH RGYR G APIKE LAAAI+ Sbjct: 128 RHGVRPNVDPQNPDLTIFAQVARKKLFLGIELTGESLHRRGYRQATGPAPIKENLAAAIL 187 Query: 183 MRSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 + S W + G LD MCGSGTL+ EAAM+A D APGL R ++GF W QH W+E Sbjct: 188 LASDWPARAKRGESFLDLMCGSGTLVTEAAMIAADYAPGLGRTQFGFERWLQHSVNDWRE 247 Query: 239 VKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 + EA+ R G G D+D VI A G+ + + +A+ T P Sbjct: 248 LLGEARERREAGRETMPV-VLGYDADGGVIASANATLEKLGLEKQARCYHRSLAEWTLPT 306 Query: 299 PKG-PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 G +SNPPYGERL +P L+ + +G I + Q GW L + ++ L + Sbjct: 307 HWALTPGLWVSNPPYGERLGDKPTLLRTYRRIGEIAREQLNGWELGMLTSDDILAREIGF 366 Query: 358 RADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAE--DYTNRLRKNLKKFEKWARQEGI 415 + + + NGP++ +HV E+ S PA + + NRL KN K+ +KW +E + Sbjct: 367 KPHDKRRLFNGPIETTYYQFHVDEAQKASAPANNEQVEAFRNRLLKNRKQLKKWVNRENL 426 Query: 416 ECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPN 475 E YRLYDAD+PE+ +A+D Y + VQEYAPPKT+ HKA+QRL + A V+ + + Sbjct: 427 EAYRLYDADIPEFALAIDVYGQALHVQEYAPPKTVPEHKAQQRLLQAVDALSDVMELPVS 486 Query: 476 KLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQ 535 K+ +K RERQKG QY+K + E VTEY L VNL DYLDTGLFLDHR R+ + + Sbjct: 487 KIAVKRRERQKGTRQYEKNDARNESFTVTEYGVTLKVNLHDYLDTGLFLDHRNMRKKVQE 546 Query: 536 MSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLN-GLTGRAHRLI 594 ++GK LNLF YTG+ T HA GGA STT+VD+S+TYL WA+ NL+LN G G HR I Sbjct: 547 TARGKRVLNLFCYTGAFTAHAYAGGAASTTSVDLSKTYLAWAKDNLQLNGGKAGPNHRFI 606 Query: 595 QADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMF 654 +DCL WL E+ + FDLI +DPPTFSNS RM+D DVQRDH L+ +LL G ++F Sbjct: 607 HSDCLQWLSESKDTFDLIIMDPPTFSNSARMKDTLDVQRDHEFLVDHAMKLLSPDGVLIF 666 Query: 655 SNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 SNN R F +D D L + Q++T +++ +DF R+ + H C+ I Sbjct: 667 SNNYRKFYLD-DRLYEA-YAVQDVTGQSVPKDFTRS-RPHRCFEIRH 710 >UniRef50_A5EX48 Ribosomal RNA large subunit methyltransferase L n=1 Tax=Dichelobacter nodosus VCS1703A RepID=RLML_DICNV Length = 729 Score = 724 bits (1869), Expect = 0.0, Method: Composition-based stats. Identities = 314/720 (43%), Positives = 422/720 (58%), Gaps = 24/720 (3%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + S A+G E++L+ E E LG + V K Y+ +WSR ASR++L Sbjct: 5 LFSCVLPCAKGSEQVLQQEAEQLGVQTLSIAPAVVRGKASLLTFYRLCLWSRTASRVLLV 64 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L V S +Y + I W + P TFAV F+GL IRN+Q+GA+K+KDA+VD Sbjct: 65 LAHENVDSAEAIYEVARNIAWEDHIAPDDTFAVRFNGLGCGIRNTQFGALKIKDAVVDRL 124 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RP+VD PDI ++ LHK ++ALDLSG LH RGYR G AP+KETLAA Sbjct: 125 RDIVKRRPDVDAKTPDILLDAHLHKNELTLALDLSGGSLHERGYRQAHGAAPMKETLAAT 184 Query: 181 IVMRSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 ++ R+ W L+DP CG+GTL++EAAM+A D AP L R WGF+ W H A+W Sbjct: 185 LLYRARWHEFCAQPATLIDPTCGAGTLVLEAAMMAADYAPNLQRQHWGFTRWQNHRPALW 244 Query: 237 QEVKAEAQTRARKGLAEYSSH-FYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLT 295 +V EAQTR G+A S + FYG D + VI AR NA+ G+ + + F K + LT Sbjct: 245 NKVIDEAQTRKNAGIAALSDYVFYGYDQNPVVIAAARANAKRLGLEDFVHFAPKRLEDLT 304 Query: 296 NPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCL 355 G G V++NPPYGERL LI ++ LG K W +++ +++ LL + Sbjct: 305 ADF--GARGFVVANPPYGERLGEVQELIPTYAALGHWFKTLPADWEMAVIASNDALLKRM 362 Query: 356 QLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVA-------------EDYTNRLRKN 402 +LRA K Y+A NG + +Y +E + A + + NRL+KN Sbjct: 363 RLRAHKYYQAFNGTIAAQIVHYRRSEQPESQETAAQQKLAQASVGISEQAQMFANRLQKN 422 Query: 403 LKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDI 462 ++K A + + YR+YD D+PEY VA+D Y D VV+QEYAPPKTID KA+QRLFD+ Sbjct: 423 IQKIRPSAERAQTDAYRIYDQDMPEYAVAIDCYGDAVVIQEYAPPKTIDPQKAQQRLFDV 482 Query: 463 IAATISVLGIAPNKLVLKTRERQKGKNQY-QKLGEKGEFLEVTEYNAHLWVNLTDYLDTG 521 + VL + + LKTR+RQ GK QY ++ E V E A VNL+DYLDTG Sbjct: 483 LQVVPEVLALDERSVFLKTRQRQTGKTQYNPAAEKRNEERIVYEGAARFLVNLSDYLDTG 542 Query: 522 LFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNL 581 LFLDHR RR+L + + GK LNLF YT +A+V A LGGA TT+VD+S TYL+WA+RN Sbjct: 543 LFLDHRPMRRLLFEQAAGKRVLNLFCYTATASVQAALGGASYTTSVDLSPTYLDWAQRNF 602 Query: 582 RLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKD 641 LN L+ R HRL +AD +AWL QFD+IF DPPTFSN+K+ + FDVQRD +AL+ Sbjct: 603 DLNALSDR-HRLQRADVMAWLHSGKSQFDMIFCDPPTFSNTKKEQRVFDVQRDQIALIDG 661 Query: 642 LKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 + L AGG + FSNN RGFR++ A+ QEI++ T+ DF R +IH W I Sbjct: 662 CMQRLAAGGILYFSNNYRGFRLEEALCAR--YCVQEISENTIDFDFKRRPKIHRVWKIMH 719 >UniRef50_Q5QX63 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Idiomarina RepID=RLML_IDILO Length = 704 Score = 720 bits (1858), Expect = 0.0, Method: Composition-based stats. Identities = 304/709 (42%), Positives = 441/709 (62%), Gaps = 12/709 (1%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M F + ++GLE LL EL+ + G + + D + Y MWSRLASR++L Sbjct: 1 MYRFFIACSKGLEGLLFDELQEFNLSHVKQTLAGCYIEADLQQAYTVAMWSRLASRMLLQ 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 LGE +V S ++ L + +W+++F+ TF V FSG ND IR++Q+GA VKD IVD F Sbjct: 61 LGEKEVSSLDEIKLALTQFSWSKVFDANRTFVVDFSGGNDDIRHTQFGAQLVKDCIVDNF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RP++D+ PDIR+ V +HK+ + +LD +GDG+H RGYR + G AP++ETLAAA Sbjct: 121 RNSGFERPSIDKQDPDIRIAVRVHKDKLTWSLDFTGDGMHKRGYRLQQGEAPLRETLAAA 180 Query: 181 IVMRSGW-----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAI 235 I++R+G + + DP CGSGTL+IEAAM+A D APGL R WGF W +H + Sbjct: 181 ILVRAGIKNELEKDEPVIFDPFCGSGTLVIEAAMMAMDHAPGLSRAHWGFLFWHEHSPQL 240 Query: 236 WQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLT 295 W +V +A+ R ++G + H GSD++ ++ +A+ NA+ + E+I FEV D Sbjct: 241 WHDVLEQAEQRFKEGKKNFKGHLKGSDNNPHLVAKAKDNAKRVLLHEVIEFEVADATNCE 300 Query: 296 NPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCL 355 P G ++ NPPYGERL + L+ GR +K+ F W++++ + LL L Sbjct: 301 APAES---GLLVCNPPYGERLGEAVETLLLYRRFGRQLKDTFQNWHIAVLAGDEQLLKRL 357 Query: 356 QLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGI 415 +LR+ K+Y NG + Y + + A+D NR++KN K KWA +EG+ Sbjct: 358 KLRSHKKYPLLNGAIPVNLALYDLTKEQ-PDFAESQADDLVNRVKKNHAKLSKWANKEGL 416 Query: 416 ECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPN 475 +C+R+YDAD+PEYN A+D Y D+VVVQEYA PK I A RL+ ++ + S L ++ + Sbjct: 417 DCWRVYDADIPEYNAAIDIYQDYVVVQEYAAPKDIPEGVANDRLWFMLESLSSALPVSED 476 Query: 476 KLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQ 535 K++LK R+RQ GK QY++ + L V EY A VNLTDYLDTGLF+DHR+ R+ L Sbjct: 477 KIILKRRQRQSGKQQYERQSQDSTVLTVNEYGAKFEVNLTDYLDTGLFMDHRLVRKELLD 536 Query: 536 MSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQ 595 + D LNLF+YT +A+V A GA +VDMS+TYL+W ERN LN L G ++ IQ Sbjct: 537 KCEELDVLNLFAYTCTASVQAARAGAARVVSVDMSKTYLKWGERNFALNRLRGD-YQFIQ 595 Query: 596 ADCLAWLREANEQ--FDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIM 653 ADC W+RE + FD+IF+DPPTFSNSKRM D+QRDH+ L+K +L+ G I+ Sbjct: 596 ADCFIWMREQRGKQLFDVIFLDPPTFSNSKRMSGTLDIQRDHVGLIKTATGMLKEDGVIL 655 Query: 654 FSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITAA 702 FSNN++ FR+D +GL K GL+ + TQ ++ +DF R++ IH+ ++I+ A Sbjct: 656 FSNNRKKFRIDTEGLDKAGLEVNDQTQASIPEDFKRHKGIHHYYIISRA 704 >UniRef50_Q3IGZ3 Ribosomal RNA large subunit methyltransferase L n=3 Tax=Alteromonadales RepID=RLML_PSEHT Length = 705 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 314/709 (44%), Positives = 426/709 (60%), Gaps = 16/709 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 A T+ G+E LL EL LGA + G V F+ D+ L + + +R A+R+++ + Sbjct: 2 QFIALTSIGIENLLVDELTELGATVSKQTVGSVRFEADSLLAQKVCLSTRFATRVLMLIE 61 Query: 63 ECK-VYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 E + V LY ++ W E F P TFAV F+G ND+++N+Q+ + +KDAIVD F Sbjct: 62 EKEGVDDKNSLYNFARSQPWQEWFGPTQTFAVDFNGTNDSLKNTQFSGLVIKDAIVDYFN 121 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 RPNVD+ ++RV L++ S+ +D SG L RGYR G APIKE LAAA+ Sbjct: 122 DLFEQRPNVDKQDANVRVVARLNRYGVSMYIDYSGPRLSERGYRQGQGKAPIKEHLAAAL 181 Query: 182 VMRSGW--QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 + RSGW PL DP CG+GT+LIEAA +A + APGL R + F A ++E+ Sbjct: 182 IKRSGWLENVNQPLFDPCCGAGTILIEAAGMARNEAPGLFREGFAFERLPSFRAAKFKEL 241 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 K E + + G D DA+V+ +A NA+ A + ++I F+ D +LT Sbjct: 242 KEELLG----NIIDPKLWLIGHDYDAQVLGKAIDNAKRAELDDIIKFKQSDATKLTA--V 295 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 G V+SN PYGER+ S L+ LH LG K F W L+L L L+L Sbjct: 296 AKLPGVVISNLPYGERIGSMAELVDLHRNLGVGFKKHFNHWKLALLGMDESLFKLLKLVR 355 Query: 360 DKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVA-------EDYTNRLRKNLKKFEKWARQ 412 K+YK KNGPLD Y + + + NRL+KN + + W +Q Sbjct: 356 LKRYKFKNGPLDVELNLYQLDDKQVSLTTDDKKALNFEGSMSFANRLKKNKQGLKNWLKQ 415 Query: 413 EGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGI 472 I YR+Y+AD+PEYNVAVD Y D V+ EYA PK ID + +RL D+I+ T L I Sbjct: 416 NEITAYRVYEADIPEYNVAVDIYGDSAVIFEYAAPKEIDEKTSEKRLQDVISLTAEQLKI 475 Query: 473 APNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRM 532 AP + +K R++QKG+ QY + ++ + V E+ A VNL DYLDTGLFLDHR+ RR Sbjct: 476 APENIAVKVRKKQKGEEQYTPMAKQNRTMVVEEFGAKFKVNLFDYLDTGLFLDHRLMRRY 535 Query: 533 LGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHR 592 + + +K K FLNLF+YTG+A+VHA LGGA++ TTVD+S+TYL+W + N LN ++ +R Sbjct: 536 IQENAKDKRFLNLFAYTGTASVHAALGGAKAITTVDLSKTYLKWGQDNFDLNNISNTRYR 595 Query: 593 LIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTI 652 QADCL WL A Q+DLIF+DPPTFSNSKRM+DAFDVQ DH+ L+ +K++L GT+ Sbjct: 596 FEQADCLKWLEHATAQYDLIFLDPPTFSNSKRMKDAFDVQSDHIKLLTWVKKILSPSGTL 655 Query: 653 MFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 +FSNNKRGF MD GL LGLKA I+ KTLS DF RN++IHN WLIT Sbjct: 656 IFSNNKRGFVMDEVGLIGLGLKAVNISDKTLSPDFKRNKKIHNSWLITH 704 >UniRef50_D2U8T0 Putative rna methylase protein n=1 Tax=Xanthomonas albilineans RepID=D2U8T0_XANAL Length = 726 Score = 708 bits (1829), Expect = 0.0, Method: Composition-based stats. Identities = 306/731 (41%), Positives = 411/731 (56%), Gaps = 39/731 (5%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 F S A+GLE LL EL G + GV+ +G R ++++WSRLASR++ PL Sbjct: 2 KFFVSCAKGLEYLLVDELLAFGVAQATATVSGVNVEGTLRDAQRAVLWSRLASRVLWPLH 61 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + + LY GV + W E P T AV I +++Y A +VKDA+VD Sbjct: 62 AFECPDEAALYAGVAVVPWCEHLTPEHTLAVDAHVSGAGITHARYAAQRVKDAVVDTLRN 121 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 L RP+VD + PD+R+N+ L K A++++DL G LH RG+R AP+KE LAAA++ Sbjct: 122 AGLERPSVDVEHPDLRLNLSLRKGRATVSVDLGGGSLHRRGWRQAQNEAPLKENLAAALL 181 Query: 183 MRSGWQ----PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHR---------------GRW 223 +R W G LLDPMCGSGTLLIE A++A D APGL R Sbjct: 182 LRGQWPALYAQGGCLLDPMCGSGTLLIEGALMAADVAPGLLRVALTAARRGDAVPTASSA 241 Query: 224 GFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGEL 283 S W D W E+ AEA+ R G A YG D D I+ AR NA+ AG+ Sbjct: 242 APSRWLGFDLTAWDELLAEARQREAAGRAALRPVLYGGDIDPHAIRAARENAQAAGVAVA 301 Query: 284 ITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLS 343 ITFEV+DVA L P+ G V+ NPPY ERL ++ A L+ LG +K W S Sbjct: 302 ITFEVRDVADLRAPV--SALGAVVCNPPYDERLVADAA---LYRRLGEALKRAVPQWRAS 356 Query: 344 LFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVA------EDYTN 397 + + DL LRA K+Y+ NG L+C P + + N Sbjct: 357 VLCGNADLAYATGLRAAKKYQMFNGALECPLIVCDPIAVAPRASAEASHALSDGAQMVAN 416 Query: 398 RLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD-------WVVVQEYAPPKTI 450 RLRKNL+KF+ W +E + C+R YDADLPEY A+D Y + ++ VQEYA P+ I Sbjct: 417 RLRKNLRKFKNWRMREQVGCFRAYDADLPEYAAAIDVYQEDAGQARTFLHVQEYAAPENI 476 Query: 451 DAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHL 510 R+R +++AA V + ++ LKTRER KG ++Y + ++GEFL V E++A L Sbjct: 477 PDADVRRRRNELLAAAREVFAVPAEQVALKTRERGKGGSKYGRFEQRGEFLVVREHDALL 536 Query: 511 WVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMS 570 VNL DYLDTGLFLDHR R + Q ++GK FLNLF YTG A+V A + GA STT+VD+S Sbjct: 537 RVNLFDYLDTGLFLDHRPLRGAMAQQARGKRFLNLFCYTGVASVQAAVAGADSTTSVDLS 596 Query: 571 RTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFD 630 TYL+W NL NG G HRL+QAD L WL ++D+IF DPPTFSNS R ED FD Sbjct: 597 GTYLQWCADNLAFNGKGGAQHRLVQADALTWLEAEKNRYDVIFCDPPTFSNSARAED-FD 655 Query: 631 VQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARN 690 +QR+H+ L++ L G + FSNN R F+++ + LA QEI+ +T++ DF RN Sbjct: 656 IQREHVRLLRAAVTRLTPEGVLYFSNNFRRFKLEENALAAFA-SCQEISAQTIAPDFERN 714 Query: 691 RQIHNCWLITA 701 +IH W + Sbjct: 715 PRIHRAWRLQR 725 >UniRef50_Q1QXV9 Ribosomal RNA large subunit methyltransferase L n=6 Tax=Proteobacteria RepID=RLML_CHRSD Length = 732 Score = 705 bits (1819), Expect = 0.0, Method: Composition-based stats. Identities = 323/724 (44%), Positives = 424/724 (58%), Gaps = 27/724 (3%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRI-MLPL 61 +L+ + RGLE LL EL + GA GVH + DT + Y+ +WSRLA+R+ + L Sbjct: 10 TLYIACPRGLEGLLADELADFGAEVTGTTVAGVHAQADTAMAYRICLWSRLANRVVLCLL 69 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 E + L + ++W G++ AV F G ++ IR++++GA VKD IVDA Sbjct: 70 REQGIERPEALVEAARRVDWGAHLRAGSSLAVDFHGQSEHIRHTRFGAQSVKDGIVDAMR 129 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 RP VD PD R+ LH+ + LDL G LH RGYR AG AP+KE LAAA+ Sbjct: 130 AAGRERPAVDLKTPDARIYAHLHRGRLLLGLDLVGGSLHQRGYRRDAGHAPLKENLAAAL 189 Query: 182 VMRSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237 +MR+ W + G PL+DP+CG+GTLLIEAA++A D AP L R + F W HD W+ Sbjct: 190 LMRADWPARARRGEPLVDPLCGAGTLLIEAALMAADIAPQLSRDYFAFEAWVGHDPDAWR 249 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 E++ EAQ RA G S YG D I A+ NA AGI LI + +VAQLT P Sbjct: 250 ELQREAQARANVGRRRVKSKLYGRDQSPPAIAAAKANAMRAGIPALIDLQGAEVAQLTRP 309 Query: 298 LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 G V++NPPYGERL P ++ +++ LG ++ +F GW L+LF+ +PDL L Sbjct: 310 EGVDGPGLVITNPPYGERLGELPEVVPIYTALGERLRAEFEGWQLALFTGNPDLGHRTGL 369 Query: 358 RADKQYKAKNGPLDCVQKNYHVAEST--------------------PDSKPAMVAEDYTN 397 RA+KQY KNGPLDC V A+ + N Sbjct: 370 RAEKQYAFKNGPLDCKLLLIPVVAQRTERETSSEGDEPQGASGATSRPGPRNDGAQMFAN 429 Query: 398 RLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQ 457 RL KN K+ +KW +Q G CYRLYDAD+PEY +AVD Y D V VQEYAPP+++D +A++ Sbjct: 430 RLEKNRKRLKKWLKQSGERCYRLYDADMPEYALAVDVYGDRVHVQEYAPPRSVDPRQAQR 489 Query: 458 RLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDY 517 RL D + VLG+ P + K R RQ GK QY K GE EV+E A LWVNL DY Sbjct: 490 RLLDALEVIPQVLGVRPESVHYKQRTRQAGKAQYAKQDASGERFEVSEGPARLWVNLRDY 549 Query: 518 LDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWA 577 LDTGLFLDHR RR L +M+ GK FLNLF YTG+ATV A LGGA + +VD+S TYL WA Sbjct: 550 LDTGLFLDHRPVRRRLREMADGKRFLNLFCYTGTATVQAALGGASDSVSVDLSNTYLAWA 609 Query: 578 ERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLA 637 N LN L HR+++ DCL WL A +FDLIF+DPPTFSNSK+M+ DVQRDH Sbjct: 610 RDNFALNRLDPSRHRVVRDDCLRWLETAGSEFDLIFMDPPTFSNSKKMDAVLDVQRDHAR 669 Query: 638 LMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCW 697 L++ L GGT++FSNN+R F +D ++I+ +T DF+R +H+C+ Sbjct: 670 LIELAMARLAPGGTLVFSNNQRRFVLD--AAVGERFAVEDISARTFDPDFSRRPDLHHCF 727 Query: 698 LITA 701 LI Sbjct: 728 LIRH 731 >UniRef50_B0U0U4 Ribosomal RNA large subunit methyltransferase L n=18 Tax=Francisella RepID=RLML_FRAP2 Length = 718 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 280/722 (38%), Positives = 411/722 (56%), Gaps = 33/722 (4%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 + FAS A+G+E LLK EL+ LG + + GV F+G Y+ ++S LAS++ML + Sbjct: 4 FTFFASCAKGIELLLKDELDALGISSSEKL-AGVEFEGSFEDAYKVCIYSHLASQVMLKI 62 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 KV LY + +INW + F+ F + SG + N+ + + K KDAIVD F Sbjct: 63 ATQKVTDQQALYDFISSINWLDYFDVNTAFKIIISGKHYDFNNTMFVSQKTKDAIVDQFR 122 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 R+ RPN+D D PD + + LHK+ ++ L L+ + LH R YR G AP+KE+LAAAI Sbjct: 123 RETNERPNIDTDNPDNIIKLHLHKQYVNVFLCLNIESLHKRSYRQFQGQAPLKESLAAAI 182 Query: 182 VMRSGW-----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 ++++GW + L+DPMCGSGT+LIEAA++A + AP L + HDE +W Sbjct: 183 LIKAGWLDELKKEQPILIDPMCGSGTILIEAALMAKNIAPVLLNKEFKLFNSKLHDEDLW 242 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 + A +K ++ G D D V+ +A N AG+ +++ + +D+ L N Sbjct: 243 NNLLEIA----KKAQKPTNAIIQGYDIDNNVLDKADRNIYQAGVEDVVNIKRQDIRDLEN 298 Query: 297 PLPKGPYGTVLSNPPYGERLDSE--PALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSC 354 L G +++NPPYGERL + L+ + + G + F GW +++ ++ + + Sbjct: 299 ELESE--GLIVTNPPYGERLYGDQLDELLDIFNGFGDRLSQDFYGWKVAILTSFDESIKE 356 Query: 355 LQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLK---------- 404 +QLR K+ K NG ++ V + + E + + ++ LK Sbjct: 357 MQLRTTKKNKFYNGAIETVLYQFDINEHARFKHESQLEKNIRLAEASALKSDEHIDFSNK 416 Query: 405 ------KFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQR 458 + W +Q G+ECYRLYDAD+P + VAVD Y + V +QEY TID + A+QR Sbjct: 417 LKKNLKNLKPWLKQSGVECYRLYDADIPTFAVAVDIYGEHVFLQEYRADATIDQNIAKQR 476 Query: 459 LFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYL 518 + I L I + + R+RQKGK QYQK ++ F + E+NA +VN DYL Sbjct: 477 FYQAIYQIHKTLDIQYENIHTRVRQRQKGKEQYQKNNDRNNFHVINEFNAKFYVNFDDYL 536 Query: 519 DTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAE 578 DTG+FLDHR R+++ + SK K LNLFSYT +A+VHA L GA+ TT+VDMS TYLEW + Sbjct: 537 DTGIFLDHRKIRQLVAKASKNKTLLNLFSYTCTASVHAALKGAK-TTSVDMSNTYLEWGK 595 Query: 579 RNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLAL 638 N LN L + H IQADC++WL+ +E+FD+IF+DPPTFSNSKRM+D D+QRDH L Sbjct: 596 NNFELNNLDIKKHNFIQADCISWLKSNSEKFDVIFLDPPTFSNSKRMDDILDIQRDHELL 655 Query: 639 MKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWL 698 + L+ G + FSNN R F+M + +AK + I + LS+DF N+ IHNCW Sbjct: 656 INLAMDSLKKDGVLYFSNNYRRFKMSQEIIAK--FNCENIDKVCLSRDFLSNKNIHNCWE 713 Query: 699 IT 700 I Sbjct: 714 IK 715 >UniRef50_P57444 Ribosomal RNA large subunit methyltransferase L n=4 Tax=Buchnera aphidicola RepID=RLML_BUCAI Length = 701 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 343/703 (48%), Positives = 482/703 (68%), Gaps = 6/703 (0%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 MN LFAST G E+LL+ EL +LG + ++++GG+++K + L+Y+SLMWSR+ASRI L Sbjct: 1 MNDLFASTNFGTEKLLEKELLSLGVSDIKIIKGGIYYKSNDLLLYKSLMWSRIASRIYLC 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + + + DLY V +INWTE+F+ TF V+F G N+ IRNS +GA+ KDAI+D F Sbjct: 61 IKIFTINNIDDLYDHVYSINWTEIFHIHNTFLVNFKGTNNFIRNSLFGALVTKDAIIDQF 120 Query: 121 TRKNLPRPNVDRDAPDIRVN-VWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAA 179 K RPNV+ PDIR+ V L+ I LDLSG+ L+ RGYR PIKE LA Sbjct: 121 QNKYASRPNVNLIEPDIRIKLVLLNNNILHIMLDLSGEPLNKRGYRQFYNTTPIKENLAT 180 Query: 180 AIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 AIV+ SGW TP++DPMCGSGT LIEAAM+++DRAPGL R +WGF W ++++ +W++V Sbjct: 181 AIVLSSGWNENTPMIDPMCGSGTFLIEAAMISSDRAPGLKRLKWGFQFWKKYNKNLWKKV 240 Query: 240 KAEAQTRARKGLAE-YSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 EA+ + + G+ + + ++F G D D +I++A+ NA AG+ ++I F KDV L N Sbjct: 241 LEEAEEKFKIGIKKCFQNYFIGYDYDPEIIKKAKKNASNAGVLKIIQFLTKDVNNLKNVY 300 Query: 299 PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 K G +LSNPPYGER +E L+ L+ LG K F W LS+FSAS LL LQ++ Sbjct: 301 HKEQEGIILSNPPYGERYQTENKLVGLYVQLGITAKKYFKNWKLSIFSASTFLLDFLQMQ 360 Query: 359 ADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECY 418 + ++Y KNGPL+C+QKN+ + ++ ++ +RL KN KK +KW E +E + Sbjct: 361 SHEKYFFKNGPLNCIQKNFLIFFKN----SSITTNEFKDRLNKNFKKLKKWINSEKLESF 416 Query: 419 RLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLV 478 R+Y ADLP YN+ VD Y WVV+QEY PK+ID +KA +RL D I T VL I+ N +V Sbjct: 417 RVYHADLPNYNIIVDVYDKWVVIQEYQAPKSIDHNKAFKRLCDAIYYTKEVLSISINNIV 476 Query: 479 LKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSK 538 LKTR + K K QY+KL +F+ + EY+A VNLTDY+DTGLF D R+ R++LG ++K Sbjct: 477 LKTRIKNKNKTQYKKLFNSNDFITIKEYHAKFLVNLTDYVDTGLFSDKRLVRKLLGVLAK 536 Query: 539 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADC 598 GKDFLNLFSYTG+ATV+AGLG A STT+VD+S TY++W+ RN+ LN LT H IQ DC Sbjct: 537 GKDFLNLFSYTGTATVYAGLGHANSTTSVDISNTYIKWSARNMSLNNLTSSQHNFIQYDC 596 Query: 599 LAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 658 L W+++ N++FDLIFI+PPTFSNSK+M+ +FD++RD+L +M LK++LR GTI+FS++ Sbjct: 597 LKWIKKTNQKFDLIFINPPTFSNSKKMQQSFDLKRDYLDVMIHLKKILRHDGTIIFSSST 656 Query: 659 RGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 R F ++ + + K+ L A++IT K S+D +N I++ WLI Sbjct: 657 RNFEINFNCIKKMQLHAKKITNKIQSKDHLKNSNIYHSWLIKH 699 >UniRef50_Q1QCP8 Ribosomal RNA large subunit methyltransferase L n=3 Tax=Moraxellaceae RepID=RLML_PSYCK Length = 776 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 270/747 (36%), Positives = 399/747 (53%), Gaps = 50/747 (6%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 L + A GLE L+TEL + G G + G R +Y+ +WSR+ASR+++ + Sbjct: 28 DLIITCADGLEAPLQTELTSFGIASEIKSTGRLAVTGTLRDLYKICLWSRVASRVLMLIK 87 Query: 63 ECKVYSD----LDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVD 118 + ++ LY +++NWTE F+ TFA+ S + Q+ +++KDAI D Sbjct: 88 RKNINAEYDVAEQLYGLAKSVNWTEQFSLEQTFAIRLSVDKRVAVSQQFAMLRIKDAIAD 147 Query: 119 AFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLA 178 F RPNVD PD V ++ + A + LDLSG LH RGYR AP+KE LA Sbjct: 148 TFNEVYESRPNVDSKNPDFSVFATVNDKQAELYLDLSGTSLHRRGYRVAMTEAPLKENLA 207 Query: 179 AAIVMRSGWQPG---------TPLLDPMCGSGTLLIEAAMLATDRAPGLHR--GRWGFSG 227 AA++ +GW L+DPMCGSGT +IEA ++ D A G+ + ++GF Sbjct: 208 AALLYSAGWHKKNEAGDTPFYNALIDPMCGSGTFIIEALLMHCDYAVGIDKAANQFGFYE 267 Query: 228 WAQHDEAIWQEVKAEAQTRARKGL------AEYSSHFYGSDSDARVIQRARTNARLAGIG 281 W HD A+WQE+ +AQTR R L + +G D+D I N AG+ Sbjct: 268 WQHHDAALWQEMIDDAQTRFRAALEIANEQPDTLPLIFGFDADNGAIIATEKNLIAAGLQ 327 Query: 282 E---LITFEVKDVAQLTNPLPKGPYG------TVLSNPPYGERLDSEPALIALHSLLGRI 332 + L+ E + + QL+ L +++NPPYGERL E + L+ +G I Sbjct: 328 DLLPLLDIETRALDQLSTLLKPLVADGRLSNPLIITNPPYGERLGDEEMIKPLYQSIGLI 387 Query: 333 MKNQFGGWN----LSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYH---------V 379 +++ F G L + ++ + + L +R K + NG + + V Sbjct: 388 LQDSFAGSGIDPMLGILASHVEQVDILPIREPKTLRCHNGAITVYFRYGTLIAGQTGNLV 447 Query: 380 AESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWV 439 + +D+ NRL+KNL + +K A+++ + R+Y+ADLP++ VA+D Y D+ Sbjct: 448 SRFEKREIEVEDGQDFINRLQKNLTRLKKLAKKDNVSNIRVYNADLPDFKVAIDLYGDYA 507 Query: 440 VVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLG---E 496 VQEYAPPKTI A++R + V GI ++ +KTR RQ G +QY K G + Sbjct: 508 HVQEYAPPKTIPPETAKKRFNLALMGIREVFGINREQIFIKTRARQSGNDQYSKQGNTEK 567 Query: 497 KGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHA 556 +G+F E A+L+VN TDYLDTGLF+DHR R + S+ K LNLF+YT +A+VHA Sbjct: 568 RGKFYIAREDGAYLYVNFTDYLDTGLFIDHRNMRARIKDNSRNKSVLNLFAYTCTASVHA 627 Query: 557 GLGGARSTTTVDMSRTYLEWAERNLRLNGLT--GRAHRLIQADCLAWLREANEQFDLIFI 614 L GA+ T+VD+S+ YL+W ++N LNGL ++ + AD W+++ EQFD+IFI Sbjct: 628 ALAGAKKVTSVDLSQNYLDWGKQNFALNGLNVSSNKYQFVAADIFEWIKDNTEQFDIIFI 687 Query: 615 DPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLK 674 DPPTFSNSK+ + FDVQRDH AL+ L A G + FSNN F +D + Sbjct: 688 DPPTFSNSKKFQGTFDVQRDHAALINRAMNRLTADGILYFSNNFTRFELDEQLTER--YD 745 Query: 675 AQEITQKTLSQDFARNRQIHNCWLITA 701 +ITQKT+ DF + IH + I Sbjct: 746 IIDITQKTIGFDFDIKKPIHQSFEIRH 772 >UniRef50_B9ZLS0 Putative RNA methylase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZLS0_9GAMM Length = 734 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 313/729 (42%), Positives = 428/729 (58%), Gaps = 36/729 (4%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 A+ ARGL LL EL LGA + + G VHF D ++Y+ L+ SR+ASRI+LPL Sbjct: 12 QEYRATVARGLGPLLAEELATLGATDAREEGGAVHFSADLEMLYRVLLGSRIASRILLPL 71 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 Y +AI+W + +PGATFAV G + IR++ + +++KDA+ DAF Sbjct: 72 ARFDQPDGDGCYTAARAIDWPALLDPGATFAVEVGGKSHHIRHTHFAGVRIKDAVADAFR 131 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 RP+VD PD+R+ + L + A +++D+ GLH RGYR G AP++E LAAA+ Sbjct: 132 EATGARPDVDPKHPDVRILLQLQGDHARLSVDIGNGGLHRRGYRGAGGAAPLRENLAAAL 191 Query: 182 VMRSGWQ---PGTP----LLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEA 234 + R+GW G P LLDP CGSGT++IEAA++AT APGL R + GWA HD A Sbjct: 192 LARAGWPARVEGDPQQAQLLDPFCGSGTVVIEAALIATRTAPGLLRHDFRPQGWAGHDAA 251 Query: 235 IWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQL 294 +WQ A+ R GSD D R +Q AR AR AG+ FEV DV L Sbjct: 252 LWQRCVDTARAAVRP---WQGPTLLGSDRDPRAVQAARQAARTAGVAACTRFEVADVLTL 308 Query: 295 TNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSC 354 T P P G ++SNPPYGER+ +P LI L+SLLG +K FGGW ++L A Sbjct: 309 TPPAPN---GLLISNPPYGERIGDQPELIKLYSLLGEHLKQAFGGWQVALLVADTTDSRR 365 Query: 355 LQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEG 414 L LRA ++Y+ NGP+DC + + ++ A A ++ NRLRKNLK ++WAR++G Sbjct: 366 LGLRATRKYRVHNGPIDCQLLEFDIHAREGQAEAAPPAPEFANRLRKNLKHLDRWARRQG 425 Query: 415 IECYRLYDADLPEYNVAVDRYAD-----WVVVQEYAPPKTIDAHKARQRLFDIIAATISV 469 + CYR+Y ADL EY + +DRY + +QE+A P +++ +A RL +AAT+ V Sbjct: 426 VTCYRIYSADLDEYPLLIDRYQATDGSVHLHLQEFAAPASVEPARAEARLRGALAATLEV 485 Query: 470 LGIAPNKLVLKTRERQKGKNQYQKLGEK-GEFLEVTEYNAHLWVNLTDYLDTGLFLDHRI 528 G+AP L K R QKG++QYQ+ V E+ L V L YLD+GLFLDHR Sbjct: 486 TGVAPAHLHYKQRRAQKGRSQYQRAETAQPAPFWVEEHGCRLKVELDAYLDSGLFLDHRP 545 Query: 529 ARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT- 587 RR L + +G LNLF YT + + HA +GGAR T +VD+S TYL+WA NL NG Sbjct: 546 MRRRLQEECRGLRLLNLFCYTAAVSAHAAVGGARQTVSVDLSNTYLDWAADNLAANGFEA 605 Query: 588 ----------GRAHRLIQADCLAWLREANE----QFDLIFIDPPTFSNSKRMEDAFDVQR 633 H L++ADC+ W+REA + +F+ IF+DPPTFSNSKR E F+VQR Sbjct: 606 TVRDGRSRRRPDTHALLRADCITWVREAADDPALRFERIFLDPPTFSNSKRTEADFEVQR 665 Query: 634 DHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQI 693 DH+ L++D RLL G + FS N+R F +D + L GL+A++IT+ TL +DF R Sbjct: 666 DHVELIRDAARLLTEDGILYFSTNRRRFELDTEAL--AGLEARDITRDTLDEDFRRPPPP 723 Query: 694 HNCWLITAA 702 H CW I+ A Sbjct: 724 HRCWAISNA 732 >UniRef50_A6GF98 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=A6GF98_9DELT Length = 783 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 304/784 (38%), Positives = 417/784 (53%), Gaps = 86/784 (10%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M L+ + RG E+LL ELE LG + + +GGV +G Y++ +WSR+ SR++ Sbjct: 3 MLELYVTAPRGAEDLLAAELEALGLAKVRARKGGVEARGTLEQAYRACLWSRVGSRVLAA 62 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGL-------NDTIRNSQYGAMKVK 113 + LY QAI+WT GA+ A+ G I NS + A++VK Sbjct: 63 VATLDAGDGDLLYASAQAIDWTTHLRRGASLAISSGGAVVGGEGGRARIDNSHFAALRVK 122 Query: 114 DAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPI 173 DAIVD + RPNVD D PD+R+++ L +++DLSG+GLH RGYR AP+ Sbjct: 123 DAIVDQLRERWGRRPNVDLDQPDLRLHLHLVGREGKLSVDLSGEGLHRRGYRVAPVAAPL 182 Query: 174 KETLAAAIVMRSGWQP----------GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRW 223 +E LAAA+++R+GW L+DPMCGS TL IEAA +A D APGL R RW Sbjct: 183 RENLAAAVLLRAGWPSYLENTRAAGRSIGLVDPMCGSATLAIEAAWMAGDVAPGLGRDRW 242 Query: 224 GFSGWAQHDEAIWQEVKAEAQTRARKGLA---EYSSHFYGSDSDARVIQRARTNARLAGI 280 GF+GWAQ + +W+ + AEA+ R GLA + DS+ R + R AG+ Sbjct: 243 GFTGWAQDEPELWRGLVAEAEARREAGLAALTREKARLLAYDSEPRAVAAGIDCVRAAGL 302 Query: 281 GELITFEVKDVAQLTNPLPKGP-------YGTVLSNPPYGERLDSEPALIALHSLLGRIM 333 E + E + + + P P G V+ NPP+GERL L +L++ LG + Sbjct: 303 IEHVHVERRSLPAIEAPAPSEAEAALDSWRGLVVCNPPWGERLGERRELESLYAALGARL 362 Query: 334 KNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAE------------ 381 ++ F GW ++ + P L L L A ++ ++GP++C + Sbjct: 363 RDHFAGWEAAILTGDPGLGRHLGLHARRRNALQDGPIECQILRIRLDPATLERARGKDGE 422 Query: 382 --------STPDSKPAMVAEDYTNRLRKNLKKFEKWARQ-EGIECYRLYDADLPEYNVAV 432 + + + NRL KN KK KW R + CYRLYDAD+PEY AV Sbjct: 423 TRKVGTKARPEVRERSEGGRAFANRLSKNAKKLRKWLRAHPEVSCYRLYDADIPEYAFAV 482 Query: 433 DRYAD------WVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQK 486 D Y D VQEYA P T+D AR R + +A L + +++ LK R+RQK Sbjct: 483 DLYTDDGTGGIHAHVQEYAAPNTVDEKVARSRRGEALAVIREDLDLPRDRVHLKHRQRQK 542 Query: 487 GKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQM---SKGKDFL 543 G+ QY+++GE G V E A LWVNL DYLDTGLFLDHR R L + GK L Sbjct: 543 GRAQYERMGESGSTFCVAEGPARLWVNLEDYLDTGLFLDHRPLRLELSGEDSPAAGKRVL 602 Query: 544 NLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT---------------- 587 NLF YT + +VHA LGGA+ TT+VD+SRTYL+WA RN LNGLT Sbjct: 603 NLFCYTAAVSVHAALGGAKHTTSVDLSRTYLDWARRNFALNGLTVHGPEEGEEGRSANDR 662 Query: 588 ---------GRAHRLIQADCLAWLREANE-QFDLIFIDPPTFSNSKRMEDAFDVQRDHLA 637 AH+L++AD L WLR ++DLI DPP+FSNSKRM+D+ D+QRDH+ Sbjct: 663 RGGRRGGTRRAAHQLVRADVLDWLRRQGSLRWDLIICDPPSFSNSKRMDDSLDIQRDHVE 722 Query: 638 LMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCW 697 L++ LL GG ++FS NKR FR+D DGL GL + ++ +DF R +IH W Sbjct: 723 LIRRCASLLSPGGALLFSTNKRRFRLDDDGL--NGLSVEPHAH-SVPRDFERRAKIHQAW 779 Query: 698 LITA 701 I Sbjct: 780 WIQR 783 >UniRef50_A5WGC0 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Moraxellaceae RepID=RLML_PSYWF Length = 807 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 267/782 (34%), Positives = 392/782 (50%), Gaps = 84/782 (10%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 + + A GLE L+TEL ++ G + +Y+ +WSR+ASR++LP+ Sbjct: 26 YDIVVTCADGLEAPLQTELSHMDISHELKSTGRIAVNATLEQIYKICLWSRVASRVLLPI 85 Query: 62 GECKVYSD----LDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIV 117 + + + L + ++WTE F TFA+ S + Q+ +++KDAI Sbjct: 86 KKRNINKEYDVAEQLNGLARTVDWTEWFELDNTFAIRMSVDKRVQVSQQFAMLRIKDAIA 145 Query: 118 DAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETL 177 D F+ K RP+VD + PD + ++++ A I LDLSG LH RGYR AP+KE L Sbjct: 146 DTFSEKLDARPDVDSNNPDFPIYATVNEKQAEIFLDLSGTSLHRRGYRVAMTDAPLKENL 205 Query: 178 AAAIVMRSGWQPG----TPLLDPMCGSGTLLIEAAMLATDRAPGLHR--GRWGFSGWAQH 231 AA ++ GW + L+DPMCGSGT +IEA ++ D G+ + ++GF W +H Sbjct: 206 AAGLLYTVGWHKTKNSYSALIDPMCGSGTFIIEALLMHCDYPVGIDKAESQFGFYNWQEH 265 Query: 232 DEAIWQEVKAEAQTRARKGLAEYS----SHFYGSDSDARVIQRARTNARLAGIGELI--- 284 D +WQ+ +AQ R GL + + G D+DA I+ N AG+ ELI Sbjct: 266 DSELWQQCVVQAQERFHNGLQKAAAGKLPTILGFDADAGAIKAVHKNLIAAGLIELIPHL 325 Query: 285 TFEVKDVAQLTNPL------PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFG 338 T E + ++QL L K V++NPPYGERL + L+ LG ++ F Sbjct: 326 TLEQRPLSQLKIALAKPLLDRKLKRPLVITNPPYGERLGESDFIKPLYQGLGLTLQEIFA 385 Query: 339 GWN----LSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYH---------VAESTPD 385 L L +A + L + + + NG + ++ + Sbjct: 386 KQKYQPMLGLLAAHVEQADVLPIEDPQTLRCHNGAITVYFRHGQLIRKEGESLITRFEKT 445 Query: 386 SKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYA 445 A+D+ NRL+KN+ +K A +E + R+YDADLP+Y VA+D Y D+V VQE+A Sbjct: 446 EIKVDEAQDFVNRLQKNVNHLKKLAAKEDVTNLRVYDADLPDYKVAIDVYGDYVHVQEWA 505 Query: 446 PPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLG---------E 496 PPK+I AR+R + V GI ++ +KTR RQ G QY Sbjct: 506 PPKSIPPETARKRFNLALMGIREVFGINREQIFIKTRARQVGNTQYGNPEASAQSKESKN 565 Query: 497 KGEF-----------------------------------LEVTEYNAHLWVNLTDYLDTG 521 E V E A+ +VN TDYLDTG Sbjct: 566 APEPKKDNRNRYKGNKFQQAREEAKRQEAQRLAQKKRKMHVVQEDGAYFYVNFTDYLDTG 625 Query: 522 LFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNL 581 LF+DHR R M+ S+G D LNLF+YT +A+VHA LGGA+S T+VD+S+ YL+W ++N Sbjct: 626 LFIDHRNMRSMIRSASRGADVLNLFAYTCTASVHAALGGAKSVTSVDLSQNYLDWGKQNF 685 Query: 582 RLNGLTG--RAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALM 639 LNGL ++ I +D W+++ +QFD+IFIDPPTFSNSK+ + FDVQRDH AL+ Sbjct: 686 ALNGLDVTTSRYQFIASDIFDWIKDNTDQFDVIFIDPPTFSNSKKFQGTFDVQRDHTALI 745 Query: 640 KDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLI 699 L GG I FSNN F +D + + + EIT +T+ DF + IH+ + I Sbjct: 746 NRAMNRLANGGVIYFSNNFTKFELDEELYDR--YEVTEITSETIGFDFNPKKPIHHSFEI 803 Query: 700 TA 701 Sbjct: 804 RH 805 >UniRef50_B2IA87 Ribosomal RNA large subunit methyltransferase L n=19 Tax=Xanthomonadaceae RepID=RLML_XYLF2 Length = 724 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 305/730 (41%), Positives = 414/730 (56%), Gaps = 38/730 (5%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 F S A+GLE LL E+ LGA GV+ +G + ++WSRLASR++ PL Sbjct: 2 RFFVSCAKGLEYLLVDEVLALGAAGATATVAGVNVEGGLCDAQRLVLWSRLASRVLWPLA 61 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + LY GV A+ W E PG T AV + I +++Y A +VKDA+VD Sbjct: 62 AFACADEDALYAGVAALPWVEHVLPGQTLAVDAHVSGEAITHARYAAQRVKDAVVDTLRD 121 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + RP+VD + PD+R+N+ L K A++++DL G LH RG+R A +KE LAAA++ Sbjct: 122 AGVVRPSVDVEHPDVRLNLSLRKGRATLSVDLGGRALHHRGWRQAPHAASLKEHLAAAVL 181 Query: 183 MRSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLH---------------RGRW 223 +R+GW G LLDPMCGSGTLLIE A++ D APGL R Sbjct: 182 LRAGWAKVYAEGGGLLDPMCGSGTLLIEGALMVADVAPGLSRYADPDAMSHVSVAERPVL 241 Query: 224 GFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGEL 283 S W D W+ + +AQ RAR+GLAE +GSD D R + A NAR AG+ + Sbjct: 242 LPSRWRGFDVVAWEALVVDAQQRARRGLAELRPVLHGSDIDPRALGAAFANARAAGVQDA 301 Query: 284 ITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLS 343 I F V + L P P+G V+ N PY RL ++P L+ LG ++ W + Sbjct: 302 IEFVVAGIDVL--PAVSEPHGVVVCNAPYDVRLAADP---GLYRHLGDALRRVVPRWRAA 356 Query: 344 LFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPD-----SKPAMVAEDYTNR 398 L S L LRADK+Y+ NG L+CV + A+ NR Sbjct: 357 LVCGSSTLAFATGLRADKKYQFFNGALECVLIVCDPVVPLAREAGGAQALSEGAQMAANR 416 Query: 399 LRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADW-------VVVQEYAPPKTID 451 LRKN+++ +KW + G+ECYR+YDADLPEY A+D Y + + VQEYA P +I Sbjct: 417 LRKNVQRLKKWRIRAGVECYRVYDADLPEYAAAIDVYQEVDGARRLFLHVQEYAAPASIP 476 Query: 452 AHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLW 511 R+R +++AA +V ++ ++ LKTR+R KG +QY ++GEF V E+ A L Sbjct: 477 EGDVRRRRHELLAAVRAVFDVSVAQVALKTRQRGKGGSQYGCFAQRGEFFHVCEHGALLR 536 Query: 512 VNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSR 571 VNL DYLDTGLFLDHR R + + + GK FLN+F YTG A+V A + GA +TT+VD+S Sbjct: 537 VNLFDYLDTGLFLDHRPLRGRMAREAVGKRFLNVFCYTGVASVEAAVAGAAATTSVDLSS 596 Query: 572 TYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDV 631 TYL W N LNG G HRL+QAD LAWL Q+D+IF DPPTFSNS R +D FDV Sbjct: 597 TYLHWCTDNFALNGQGGVRHRLVQADALAWLEAERGQYDVIFCDPPTFSNSARADD-FDV 655 Query: 632 QRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNR 691 QRDH+ L++ L GG + FSNN R FR+D+D +A + +EI+ T+ DF+RN Sbjct: 656 QRDHVRLLRAAVARLTPGGVLYFSNNFRRFRLDVDAVAAFA-QCEEISPVTIDLDFSRNT 714 Query: 692 QIHNCWLITA 701 +IH WL+ Sbjct: 715 RIHRTWLLWR 724 >UniRef50_C7N0P8 Predicted N6-adenine-specific DNA methylase n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N0P8_SLAHD Length = 729 Score = 617 bits (1591), Expect = e-175, Method: Composition-based stats. Identities = 251/730 (34%), Positives = 378/730 (51%), Gaps = 41/730 (5%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 FA A G E+ L EL + + + GGV F G ++ + SR+A+R+ L LG Sbjct: 9 EFFARCASGFEDQLAAELTQIRCRRVRPLHGGVAFFGAYEDGLRACLHSRVATRVQLVLG 68 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + LY GV+A+ W + PGAT A+ +G N +RN+Q+ A+KVKDA+ D Sbjct: 69 RVSARNADALYDGVRALPWETLVAPGATIAMRATGQNSNLRNTQFTALKVKDAVCDRLAA 128 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRD--RAGIAPIKETLAAA 180 + RP+VD PD V++ LH++ A+I+L+L+G LH RGYR+ AP+KETLAA Sbjct: 129 ERGARPDVDGSDPDFSVDILLHRDKATISLNLAGPVLHKRGYREPGVQTEAPLKETLAAG 188 Query: 181 IVMRSGWQ----PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 +++ +GW G DPMCGSGTL IEAA++AT APGL R RWGF+ + HD A W Sbjct: 189 MLLAAGWDSMVADGMGFADPMCGSGTLAIEAALIATRAAPGLLRNRWGFTAYMPHDPAAW 248 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 + + AEA+ AR E D + + AR NA AG+ ELI F V D A L Sbjct: 249 ERLVAEAEA-ARVPAWESGVRILAGDMNEEAVAVARANAERAGVAELIEFYVDDAANLGT 307 Query: 297 PLPKG---PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLS 353 L +G G V NPPYG RL S L +++ L GGW L++ S + + Sbjct: 308 HLKRGRRLSGGLVACNPPYGHRLLSGEDLSQVYAALDSATAKLGGGWQLAIISPDEGVDT 367 Query: 354 CLQLRADKQYKAKNGPLDCVQKNYHVAESTPD-------------SKPAMVAEDYTNRLR 400 L ++ NGPLD + Y + ++ +E + R R Sbjct: 368 GLGRMPERSIACHNGPLDTSLRIYDLGKAAARLSIPSLSGSDSVVPVAEGASEQFAARFR 427 Query: 401 KNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRY-----ADWVV-VQEYAPPKTIDAHK 454 K K+ KWAR+ G+ YR+YDADLPEY +VD + +V V+E+ +DA + Sbjct: 428 KVAKERAKWARKAGVHSYRVYDADLPEYAFSVDVFRSAEDDGLLVRVEEHRAGSNVDADR 487 Query: 455 ARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNL 514 A +R+FD +A +VL + ++ K ++K + + +++V E + +++ Sbjct: 488 ANRRVFDGLAIVSAVLDVPRERVFCKRARQEKSRP-----AAEPVWVDVRESDFVFDMDI 542 Query: 515 TDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYL 574 + GL LD R R +L + K F L ++ G+ +V+A GGA ST TVD + +L Sbjct: 543 ASQRECGLPLDMRPVRELLRAHAASKRFACLLAHGGAPSVYAAAGGAVSTVTVDPADPFL 602 Query: 575 EWAERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAFDV 631 E A+ L +NG GR H L+ D L W R A +DL+F D F +S+ + D+ Sbjct: 603 EQADHALYVNGFRGREHDLVCDDPLDWARREARAGRTYDLVFCDLSAFPSSR----SHDL 658 Query: 632 QRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNR 691 DH+++++ + R+L G ++ + + R F + GL AQ+IT T+ DF R Sbjct: 659 IADHMSVIQQIVRILSPEGKLVLTCHDRRFNLSDKAFGGHGLTAQDITADTIGHDFTRTP 718 Query: 692 QIHNCWLITA 701 +IH +LI Sbjct: 719 KIHRAFLIGH 728 >UniRef50_Q0VQU5 Ribosomal RNA large subunit methyltransferase L n=2 Tax=Alcanivorax RepID=RLML_ALCBS Length = 704 Score = 613 bits (1581), Expect = e-174, Method: Composition-based stats. Identities = 271/712 (38%), Positives = 388/712 (54%), Gaps = 26/712 (3%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 A+ GL +LL EL +LG + + V F G + +WSRL+ R++L L Sbjct: 2 EFVATCMPGLADLLSDELGSLGISVTETGRAHVSFSGGVADALKVCLWSRLSERVLLHLA 61 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 V D+ + +W + A +H + +++ A + A+ + F Sbjct: 62 TLGVTPDIAPEKLAASQDWLSLVGNNAPVHLHIEHGAEVRGDNRISAKRFIHALPEQFAI 121 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 P+ + + L A + LDL+G+ LH RGYR G AP++ETLAAAI+ Sbjct: 122 SREPKGSCC-------IRARLDLNEAHLWLDLAGEPLHRRGYRLAGGRAPLRETLAAAIL 174 Query: 183 MRSGWQPG---TPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 GW + L+DP CGSGTL+IEAA++A RA G R +GF W +W + Sbjct: 175 WAVGWGKEGRHSALIDPFCGSGTLVIEAALIAAGRAAGAQRQHYGFQQWRGCRRQLWLDA 234 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 + EA ++ + S G DS+A +Q A NA AG+ I FE +++ L Sbjct: 235 QKEAGESGKRPVPAVSLK--GFDSEASTLQLALQNAERAGVRNAIHFERRELGALRRR-D 291 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 G V+ NPP+GERL+ +P LH LGRI+ + G+ L A +++ + Sbjct: 292 FVDNGIVVGNPPWGERLEEKPQAGWLHYALGRILSVRAPGYQALLLGADAEVMDRSGMNL 351 Query: 360 DKQYKAKNGPLDCVQKNYHVAESTPDS----------KPAMVAEDYTNRLRKNLKKFEKW 409 ++Q++ KNGP + + Y + TP + A+ NRLRKN K +W Sbjct: 352 EQQWRLKNGPFNNFIRLYSPRKQTPANVVKVADDSAFNVPEGAQPLLNRLRKNGKHLRRW 411 Query: 410 ARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISV 469 +E I+CYRLYD DLPE+NVAVD YAD V+VQE+ PKTID KA++R + A + Sbjct: 412 LEREDIQCYRLYDRDLPEFNVAVDIYADQVLVQEFKAPKTIDPEKAKERRDWAVTAVRAA 471 Query: 470 LGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIA 529 LG+ ++ L+TRE+QKG QYQKL +G++ V E + L +NL DYLDTGLFLDHR Sbjct: 472 LGVHREQVHLRTREKQKGNQQYQKLDAQGQYRVVREGQSQLLINLQDYLDTGLFLDHRPT 531 Query: 530 RRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGR 589 R + + + GK FLNLF+YTGSATVHA +GGA+ T TVD S+ YL+WA NL NG + Sbjct: 532 RLRIAEEASGKRFLNLFAYTGSATVHAAVGGAKRTVTVDSSKRYLDWAACNLAANGFSTD 591 Query: 590 AHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAG 649 H L +AD + WL E EQFDL+F DPPTFSN+K D F V+ H L++ + R L G Sbjct: 592 QHELARADTMRWLDECKEQFDLVFCDPPTFSNNKSRSD-FVVEEHHGDLIRKIMRCLEPG 650 Query: 650 GTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 G + FS N R F+MD ++I++ ++ +DF RN +IH C+ I Sbjct: 651 GVLYFSCNYRRFQMDESISKW--YAVEDISRWSIPEDFRRNEKIHYCYAIRH 700 >UniRef50_D0KZE4 Putative RNA methylase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZE4_HALNC Length = 751 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 261/739 (35%), Positives = 368/739 (49%), Gaps = 49/739 (6%) Query: 6 ASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECK 65 +A ++ L E+ +L + GV Y+ + S +A + L L + Sbjct: 15 VVSAPDMQAPLAEEIRSLVDAKVSDRPFGVLLDATPEQAYRIVCDSLIAGHVYLTLITGQ 74 Query: 66 VYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNL 125 + +LY VQ I+W E F + +G D +R++ + A ++KDAIVD F + Sbjct: 75 AATADELYRLVQQIDWAEHLAAEGYFTISATGSTDALRHTGFVATRIKDAIVDQFRERTG 134 Query: 126 PRPNVDRDAPDIRVNVWLH-KETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMR 184 RP +D + PDIR++ L +++L+LS LH RGYR G+AP++ETLAA ++ R Sbjct: 135 TRPTIDSEQPDIRLHCHLTASGHTTLSLELSNGSLHRRGYRTDGGLAPLRETLAAGMLWR 194 Query: 185 SGWQP--------GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 + W G L DPMCGSGTLLIEAA+ T L R G +GW H E Sbjct: 195 ARWPQLVASETETGAALFDPMCGSGTLLIEAALRLTGLPQDLRVKRIGSTGWLGHREQAQ 254 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 + V A+ G D D I AR NA AG+ L+ F D + Sbjct: 255 KRVLDNPPELAK---GVDKLTLIGQDIDIEQITAARANAERAGVDHLMVFREADAWKAPC 311 Query: 297 P--LPKGPYGTVLSNPPYGERL--DSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLL 352 P +G V+SN PYG RL + S L + F GW+ + + Sbjct: 312 PPEFEGKSHGLVVSNLPYGHRLDVGGDHEGEPDWSALTDQWQRCFNGWHWAFLLPEGE-G 370 Query: 353 SCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAM------------------VAED 394 LR ++ + + P A Sbjct: 371 QNWPLRYERVFPMDQSGIAIDMIRGSFDGKARREAPGPIGLANRLCAAAEQARALVDAAP 430 Query: 395 YTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD-----WVVVQEYAPPKT 449 + NRL+KN + +K A +EG C+R+YDADLP++N AVD Y D W +QEY P Sbjct: 431 FANRLQKNYRHLKKLAEREGWCCFRVYDADLPDFNCAVDLYRDEAGETWADIQEYRAPNK 490 Query: 450 IDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAH 509 ID AR RL I+ + L +A N V++ R+RQ G QYQK+ ++ V E + Sbjct: 491 IDPQLARARLSIIVEQVMENLSLAENHSVVRQRKRQTGTEQYQKITQERLERVVHEGSTR 550 Query: 510 LWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDM 569 LWVNLTDYLDTGLFLDHR+ R + ++S+GK LNLF YT +A+V A GA T ++D+ Sbjct: 551 LWVNLTDYLDTGLFLDHRLVRDRVAELSRGKKLLNLFCYTATASVRAAHQGASRTVSIDL 610 Query: 570 SRTYLEWAERNLRLNGLT-GRAHRLIQADCLAWLREAN------EQFDLIFIDPPTFSNS 622 S TYL+WAERN LN L G H LI+AD L WL + + E+FD+IF DPPTFSNS Sbjct: 611 SNTYLDWAERNFTLNNLKVGTEHSLIRADVLDWLEQRSNAIYQPERFDVIFCDPPTFSNS 670 Query: 623 KRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKT 682 K M+D D+QRDH L++ LL GT++FSNN +GF + L + + ++++KT Sbjct: 671 KAMQDTLDIQRDHEFLVRSCMHLLSDDGTLIFSNNLKGFTLSSKLLDE--FRINDLSRKT 728 Query: 683 LSQDFARNRQIHNCWLITA 701 L DFAR + + I Sbjct: 729 LPGDFARTPNRRSVFEIRH 747 >UniRef50_B9CL66 Methyltransferase n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CL66_9ACTN Length = 747 Score = 601 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 262/756 (34%), Positives = 382/756 (50%), Gaps = 70/756 (9%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + FA+ +G E+LL EL L + + + G V F+G Y+ +WSRLASR++L Sbjct: 5 IQEFFATCPKGFEQLLGCELSRLSISQIRPLSGQVSFRGTLADAYRVCLWSRLASRVVLV 64 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 LG +LY GV I+W +P ATFAV+ G N +RN+ + A++VKDAIVD Sbjct: 65 LGRMSATQADELYAGVSEIDWEAHISPHATFAVNAHGTNSELRNAHFTAVRVKDAIVDQL 124 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDR----AGIAPIKET 176 K RP V+ D PD+ V V + K AS+ +DL+GD L RG R +AP++ Sbjct: 125 IAKRGSRPMVNTDFPDVTVTVRITKTHASLGIDLAGDPLFKRGIISRRTLTQNLAPLRPD 184 Query: 177 LAAAIVMRSGW--------QPGTPLLDP------------MCGSGTLLIEAAMLATDRAP 216 AAA++ G G L P G+G+L+ E + +D AP Sbjct: 185 YAAALLAAHGIYGGNRSEKHGGKSLETPAYEAAAATPSILFSGAGSLVHELVGIRSDCAP 244 Query: 217 GLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNAR 276 GL R RWG GW HD +W E+ EA RA SD+ + AR + R Sbjct: 245 GLLRTRWGMLGWVGHDSKVWSELIDEATYRANACEKNLEVCI--SDTRPKADVAARHSLR 302 Query: 277 LAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSE-PALIALHSLLGRIMKN 335 +G+ + F G V +G L + AL AL Sbjct: 303 ASGLSASLRFLSPK----ELAEHTTDGGIVADMSWFGHNLAVQGSALSAL---------A 349 Query: 336 QFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVA--- 392 F G ++ S + L ++ G + Y ++ V Sbjct: 350 HFVGTKATVLSLDETSDTTLGQQSSSVTNVLVGKTPAGIRTYAATKNFELPPTVTVRAKQ 409 Query: 393 --------EDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD------W 438 + ++ RL K K +WA++E I CYR+YDADLP+Y V++D Y W Sbjct: 410 LPVLVGASDQFSARLTKVAKLRARWAKREDISCYRIYDADLPDYAVSIDLYQGCTSSKRW 469 Query: 439 VVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKG 498 + + EYA P IDA A++RL D++ VL + P+ + L+ R R KG +QY GE Sbjct: 470 LQISEYAAPHDIDATLAKKRLLDVLTIAPEVLEVPPHHVNLRIRTRAKGGSQYVSEGEAP 529 Query: 499 -----EFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSK----GKDFLNLFSYT 549 + L + E V+ + +LD G+FLDHR R M+ +M K K FLNLF+YT Sbjct: 530 TYAHKQTLLIDEGGLTFEVDFSQHLDCGIFLDHRQTRAMIREMMKTAGTAKSFLNLFAYT 589 Query: 550 GSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL---REAN 606 G+AT +A GGA TTTVD+S+ LEWA RN+ NG G+ H +QAD L W+ R + Sbjct: 590 GTATCYAADGGALHTTTVDLSKPSLEWARRNMCQNGFDGQEHEFVQADALTWITEQRRSK 649 Query: 607 EQFDLIFIDPPTFSNSKRMED-AFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL 665 ++++IF D PTFSNS RM+ +FDVQRDH L+ + RLL GG +FS N R F+ D+ Sbjct: 650 NRWNVIFCDVPTFSNSSRMKKASFDVQRDHAELIIGISRLLTRGGVALFSCNLRSFKPDV 709 Query: 666 DGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 + + + G+ ++IT++T+ +DFARN++IH+C+ +T Sbjct: 710 EKIERAGVSLEDITKETIPEDFARNQKIHHCYRVTR 745 >UniRef50_C8WGP0 THUMP domain protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WGP0_EGGLE Length = 768 Score = 588 bits (1515), Expect = e-166, Method: Composition-based stats. Identities = 291/764 (38%), Positives = 408/764 (53%), Gaps = 67/764 (8%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 LFAS GLE L EL+ LG + + GGV F D R + +WSRLASRI++ +G Sbjct: 7 ELFASCLSGLEAPLAEELKRLGIKRVRPLGGGVAFFCDVRHALSACLWSRLASRILVVVG 66 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 LY GV+ I W + PGA+ +V G+ND +RN+++ A+KVKDA+ D Sbjct: 67 RVNAGDANLLYEGVRRIAWEGVIVPGASMSVQAHGMNDELRNTRFTALKVKDAVCDRLRE 126 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGY--RDRAGIAPIKETLAAA 180 RP+VD D D+ V+V + + A+I+LDLSG+ L+ R Y D AP+ LAA Sbjct: 127 MRGERPDVDADHADVSVDVRVREGRATISLDLSGESLYHRSYLTPDDGPDAPLSCALAAG 186 Query: 181 IVMRSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 ++ +GW+ G L+DP CG G L++EAA A D APGL R RWGF GW D +W Sbjct: 187 LLALAGWRTRGSRGEALVDPACGDGFLVVEAASAACDLAPGLTRERWGFFGWVPSDPDVW 246 Query: 237 QEVKAEAQTRARKGLA-----------------EYSSHFYGSDSDARVIQRARTNARLAG 279 E+ EA R +GLA F G+ + + I RAR +A+ AG Sbjct: 247 NELIDEADERFERGLASATAPGALDGPASAPPDPAHVRFAGASTSSPAIARARVHAKRAG 306 Query: 280 IGELITFEVKDVAQLTNPLP------------KGPYGTVLSNPPYGERLDSE-------- 319 + + ++ E+ D + + + TV S P GER S+ Sbjct: 307 LRQAVSIELADAQSVDELVSRVCAAAGRERGGEAASCTVASVLPTGERAQSDARSQADAA 366 Query: 320 ---------PALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPL 370 PA G I++ +FG D + L DK + Sbjct: 367 AFVRAASVAPAGSTFAVAGGEIVEARFGVAPAVRAVLGRDRVETEALVFDKP---PMEAV 423 Query: 371 DCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNV 430 V + +E + RLRK K+ KWAR+EG+ CYR+YDADLP+Y V Sbjct: 424 KVVVPDPAGGAEHVVEVLEPTSEQFAARLRKTAKERRKWARREGVSCYRVYDADLPDYAV 483 Query: 431 AVDRY---AD-----WVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTR 482 A+D Y D ++ + EYA P TID KA++R D++A VLG+ P+ + K R Sbjct: 484 AIDVYPGAGDAEGNLYLHIAEYAAPSTIDPGKAQRRYDDVLALAPVVLGVRPDHVFSKVR 543 Query: 483 ERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDF 542 R KG +QY+ G + +V E V+L YLDTGLFLDHR+ R ++G+ ++GK F Sbjct: 544 RRDKGGSQYRDSGRRSYVTQVREDGYLFEVDLAGYLDTGLFLDHRLTRELVGKKAEGKRF 603 Query: 543 LNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL 602 LNLF+YTGSA+VHA GGA+ST TVD+S+TYL+WA RN+ NG G H + D +AW+ Sbjct: 604 LNLFAYTGSASVHAAGGGAKSTATVDLSQTYLDWAARNMAANGFEGEQHTFERGDTMAWV 663 Query: 603 ---REANEQFDLIFIDPPTFSNSKRM-EDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 658 R +FDL+F+DPPTFSNSK M + +DVQRDH+ L+ + RLL G +FS N Sbjct: 664 TEARRTGRRFDLVFVDPPTFSNSKAMGKRTWDVQRDHVELLIGVSRLLSEEGEAVFSCNL 723 Query: 659 RGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITAA 702 R F+ D + LAK G+ ++IT +T+ DF RN +IH C+L+ Sbjct: 724 RSFKPDEEALAKYGVTLEDITAQTIPHDFERNPRIHKCYLVKRT 767 >UniRef50_C8W7K3 THUMP domain protein n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W7K3_ATOPD Length = 760 Score = 574 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 255/764 (33%), Positives = 391/764 (51%), Gaps = 80/764 (10%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 FA+ +G E+LL ELE+L + + + G V F G Y+ +WSRLASR++L L Sbjct: 6 EFFATCPKGFEKLLSQELESLHIKKVRPLGGQVAFYGLLADAYRVCLWSRLASRVILVLD 65 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + + LY + + W + P AT AV+ G ND +RN+ + A++ KDAIVD Sbjct: 66 RIEAATSDTLYEELSHLAWEDHIGPRATIAVNAHGTNDQLRNTNFIAVRTKDAIVDRLAA 125 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIA----PIKETLA 178 K RP V+ APD+ + V + + A++ +DL+G+ L R G A P++ A Sbjct: 126 KRGSRPMVNTLAPDVTIVVRISRNRATVGIDLAGEALFKRSLTGGRGPAREFAPLRLDYA 185 Query: 179 AAIVMR--------SGWQPGTPLLDP---MCGSGTLLIEAAMLATDRAPGLHRGRWGFSG 227 AA++ SG+ P L P G+G L EAA +A D APG+ R RWG +G Sbjct: 186 AALLYLQAQTATSASGFSPDALL--PALLFPGAGALAQEAAGMALDVAPGILRARWGMTG 243 Query: 228 WAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFE 287 WA H++ +WQ++ AEA RA KG E Y +DS + + R + + F Sbjct: 244 WAGHNDDVWQDLLAEADERAEKG-QERQITLYAADSRPKAKEAVLYTLRAGSLKADVQF- 301 Query: 288 VKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALI-ALHSLLGRIMKNQFGGWNLSLFS 346 +A + V+++ + + EP L + ++ LG F G +L + Sbjct: 302 ---LAASELLKHAEHFTGVVADLSWTK---EEPTLQGSAYATLG-----LFAGQASTLLT 350 Query: 347 ASPDLLSCLQLRADKQYKAKNGPLDCVQKNYH---------------------------- 378 + + + L+ + G ++Y Sbjct: 351 SDTNTDTVLRATPTQTLSVYVGNSIATIRSYPAANAEGADSSATNAPVSSSKPTSVPAGP 410 Query: 379 --VAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYA 436 + + P S ++ + RL K K+ KWAR+ + CYR+YDADLP+Y V++D Y Sbjct: 411 TVMVNNQPVSVLVPASDQFAARLTKVAKQRAKWARKNDVSCYRVYDADLPDYAVSIDIYK 470 Query: 437 D------WVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQ 490 W+ + EYA K ID A++RL D++A +LG+ + + L+TR R KG +Q Sbjct: 471 GATKPTTWLQISEYAASKEIDPDLAKRRLLDVLALAPRILGVPSSNVNLRTRTRAKGGSQ 530 Query: 491 YQKLGE-----KGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKG----KD 541 Y G + E L + E VN LD G+FLDHR R + ++ K K Sbjct: 531 YSNEGSATDNSRKEMLLIDEGGLLFEVNFASRLDCGIFLDHRDTRAEIRELMKRAGTAKS 590 Query: 542 FLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW 601 FLNLF+YTG+AT +A G A TTTVD+S+ LEWA+RN++ NG G H +QAD L+W Sbjct: 591 FLNLFAYTGTATCYAADGDALHTTTVDLSKPSLEWAKRNMKRNGFGGEDHEFVQADVLSW 650 Query: 602 ---LREANEQFDLIFIDPPTFSNSKRMED-AFDVQRDHLALMKDLKRLLRAGGTIMFSNN 657 +R ++++IF D PTFSNS RM+ +FDVQRDH L+ + RLL GG +FS N Sbjct: 651 ITEMRHTKNRWNVIFCDVPTFSNSSRMKQSSFDVQRDHAELIIGISRLLTHGGVAIFSCN 710 Query: 658 KRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 R F+ D++ + + G+ ++IT KT+ +DF+RN++IH+ + I+ Sbjct: 711 LRTFKPDVEKIERAGVVIEDITSKTIPEDFSRNQKIHHAYKISR 754 >UniRef50_C2D7E0 N6-adenine-specific DNA methytransferase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D7E0_9ACTN Length = 823 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 218/814 (26%), Positives = 344/814 (42%), Gaps = 117/814 (14%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 FAS G E+LL EL ++ V+ + +QG V F + Y +++RLASRI+ + Sbjct: 11 EFFASCPLGFEQLLSRELRSIAPVKTRPLQGRVQFFSTLKDAYTICLYTRLASRIVYVIK 70 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 LY I W E + G T A+ G N+ + NS + A KVKDA+ DA + Sbjct: 71 HIDATDAQTLYQQAAEIPWWEHIDRGTTCAIDAHGTNENLSNSIFSAQKVKDALCDACIK 130 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRD----RAGIAPIKETLA 178 RP++D PD+ +++ + K A++ +DLSG+ L RG+ + +A ++ A Sbjct: 131 TQGWRPSIDTHHPDVMISLRIAKNRATLGIDLSGEPLFKRGWEAQKSTQHHLAFLRPDYA 190 Query: 179 AAIVMRSGW-----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDE 233 AA++ +S W L+ SGTL IEA A A G +R WGF W H Sbjct: 191 AALLSQSSWYSCVRHEHATLVCAYPQSGTLCIEAVEQALHLACGRNRIHWGFLKWKGHQP 250 Query: 234 AIWQEVKAEAQTRARKGLAEYSSHFYGSD---SDARVIQRARTNARLAGI-GELITFEVK 289 IW+ + +++ + + + D + + IQ R A + + FE Sbjct: 251 DIWENIIEQSK-KDEQRYQNHRCTLVLYDDTATQRKSIQTIRFMLSRAHVSASRVNFETV 309 Query: 290 DVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALH------------------SLLGR 331 D + K G ++N + S + A S L R Sbjct: 310 DFDEFIQRYTKFSQGQSIANNSNAPHVASNASATAFIFNASQTDVSSTAVCADRVSKLIR 369 Query: 332 IMKNQFG------------GWNLSLFSASPDLLSCLQ---LRADKQYKAKN-----GPLD 371 + +L++ +L L + G L Sbjct: 370 AAQATCKEDEPTKNSSETLKRSLTVSIPD-ELAHEAGDALLAQTCTTRLGTQTVLFGNLR 428 Query: 372 C---VQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQ------EGIECYRLYD 422 + + + + + + + + ++ E + CYR+YD Sbjct: 429 PAARELYSCELGGTWSQGRIQDITIFDKGAAQFAARFKKTLKQRGSWAKREDVSCYRVYD 488 Query: 423 ADLPEYNVAVDRYA-----------------DWVVVQEYAPPKTIDAHKARQRLFDIIAA 465 ADLP++ ++D + W+ + EY PK ID KA+ RL+D + Sbjct: 489 ADLPDFACSIDMFNAYQPRTTKTATQDGSAQRWLNISEYKAPKVIDPVKAKLRLYDTLHI 548 Query: 466 TISVLGIAPNKLVLKTRERQKGKNQYQ-----------------------------KLGE 496 +L P + + TR + KG +QY + Sbjct: 549 ASLILQTKPEDVFVHTRMQAKGGSQYHMPQTSNIRKTAHTRDASTTALRNASASPLRKSS 608 Query: 497 KGE-FLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSK----GKDFLNLFSYTGS 551 E + E VN T D G+FLD R R + +M+K K FLNLF+YT + Sbjct: 609 MPEGSHLIEEGGLIFEVNFTARHDCGIFLDFREVRNRVREMAKAMKGSKRFLNLFAYTAT 668 Query: 552 ATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW---LREANEQ 608 +T +A GGA TTTVDMS L+WA+RN+ NG G H I+AD L W +R + + Sbjct: 669 STCYAADGGANYTTTVDMSAPTLQWAQRNMERNGFKGNQHEYIRADVLTWIQDMRHSKNR 728 Query: 609 FDLIFIDPPTFSNSKRMED-AFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDG 667 +DLI D PTFSNS +M +DV RDH+ L+ L RLL G +F N + F ++ + Sbjct: 729 WDLILCDVPTFSNSNKMHGKTWDVARDHVELIITLSRLLTRDGKALFCCNLKHFTLNKEA 788 Query: 668 LAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 L K G+ +IT T+ DFAR + +H+ +++T Sbjct: 789 LGKAGVVIHDITADTIPFDFARTQNVHHAYIVTR 822 >UniRef50_Q55156 Putative RNA methyltransferase slr0064 n=22 Tax=Cyanobacteria RepID=Y064_SYNY3 Length = 384 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 135/378 (35%), Positives = 211/378 (55%), Gaps = 6/378 (1%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 FA+ ARGLE + EL LGA + + GV F GD L+Y+ +WSRL R+++P+ Sbjct: 13 PYFATVARGLEAIAAQELTELGAEQVKPEFAGVAFIGDRALLYRINLWSRLIYRVLMPMA 72 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 K ++ DLY ++ I+W E F+P T ++ +G N + +S + A++VK+AIVD Sbjct: 73 TVKAFNAQDLYRSIKKIDWDEYFSPEQTLQINCTGKNPQLNHSHFTALQVKNAIVDQQRD 132 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + R +VD + PDI +N +H+ ++LD +G LH RGYR G AP+KETLA+A++ Sbjct: 133 RYQRRSSVDLEQPDIVINAHIHQNHCQLSLDSTGFSLHRRGYRPALGNAPLKETLASALL 192 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 +GW P PL DP+CGSGT L+EA + + + APG + + F W D+ +W + Sbjct: 193 TMAGWTPELPLYDPLCGSGTFLLEAGLQSLNIAPGKFQPGFCFQQWPDFDQDLWHSLLQT 252 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 A+ R L + +GSD D VIQ A++NA+ +G I ++ + A + P Sbjct: 253 AKAGERDTL---QAPLWGSDGDREVIQAAKSNAQQCQLGGKIHWQKLNFADIEPP---AA 306 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 G ++ NPPYG+R+ E AL + +G ++K +F GW +FS + L + LR + Sbjct: 307 EGVLICNPPYGKRIGQEEALGDFYQQIGDVLKQRFRGWTAFVFSGNKALTKRIGLRTSAR 366 Query: 363 YKAKNGPLDCVQKNYHVA 380 + NG L C Y + Sbjct: 367 FPVNNGGLPCTLLKYELY 384 >UniRef50_B8FHN3 Putative RNA methylase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHN3_DESAA Length = 382 Score = 450 bits (1159), Expect = e-125, Method: Composition-based stats. Identities = 137/382 (35%), Positives = 213/382 (55%), Gaps = 5/382 (1%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 LF S +R +L EL+ L GV F D Y+ ++WSR ASR+++ + Sbjct: 2 ELFVSCSRKTAPILAEELKGLCIENISESAAGVRFDADLATAYKVILWSRTASRVLMTVA 61 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + K + LY G++ I+WTE + + AV F+ + ++Q+GA +VKDA+VD F + Sbjct: 62 KFKADNQQALYEGIREIDWTEHLDYRKSIAVDFTSTRSALSHTQFGAQRVKDAVVDQFKK 121 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 R V+ + PD+R+NV + + A ++DLSGD LH RGYR G+AP++E LAAAI+ Sbjct: 122 DVGDRLMVNTNRPDVRINVHVQNDEAVASIDLSGDSLHKRGYRLEGGVAPLRENLAAAIL 181 Query: 183 MRSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 +R+GW + G PL+DPMCGSGT +IE A++A + APGL R +GF GW HD+++W Sbjct: 182 LRAGWPEIARTGGPLIDPMCGSGTFVIEGALMAANIAPGLLRNYFGFVGWKGHDKSLWAG 241 Query: 239 VKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 + +A A +G GSD R ++ A+ N AG+ + E +++A+ P+ Sbjct: 242 MVGDASRLAEEGKKRLPP-IVGSDHHPRAVEHAKANVTRAGMTGYVKIEHREMAKARPPM 300 Query: 299 PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 G V NPPYGER+ L AL+ LG ++ +F + ++L + P++ + L Sbjct: 301 KAKMPGLVAVNPPYGERIGESEELAALYKELGSVLSKRFRRYKVALITGHPEVAKNIGLG 360 Query: 359 ADKQYKAKNGPLDCVQKNYHVA 380 K NGP++C Y V Sbjct: 361 KRKASTLFNGPIECKLYRYEVD 382 >UniRef50_A1ARJ2 Putative RNA methylase n=9 Tax=Desulfuromonadales RepID=A1ARJ2_PELPD Length = 393 Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 142/378 (37%), Positives = 207/378 (54%), Gaps = 7/378 (1%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 FA+ RG E++ EL LG Q +GGV F+ + +Y++ +W R ASR+++ L Sbjct: 23 ECFAAVPRGSEDVTAAELRLLGIEGAQAGRGGVSFRTNRAGLYRANLWLRSASRVLVRLA 82 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 S +LY GV AI W EM P T AV S + + +S + A+K KDAIVD Sbjct: 83 GFPCSSPAELYDGVHAIPWQEMITPAMTLAVDCSLRDSALTHSGFVALKTKDAIVDRIRE 142 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 RPNVD +PD+RVN+ L K +++LD SGD L RGYR AP++ETLAAAI+ Sbjct: 143 ACGSRPNVDTASPDVRVNIHLVKNVCTVSLDSSGDALDRRGYRLERNEAPLRETLAAAII 202 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 +GW L DPMCGSGT+ IEAA++A PG +R +GF W D +W+ ++AE Sbjct: 203 ALTGWDGNVALADPMCGSGTIPIEAALMAARVPPGRNRS-FGFQRWQDFDPRLWKGIQAE 261 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 A++ R+ G DSD+R + AR NA AG + F + Q +G Sbjct: 262 AESGIRQL---PVGLVSGYDSDSRALSIARRNAAAAGFEGQVHFFHSSLEQFRP---EGE 315 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 G V+ NPPYG+R+ E L L+ +G I+K + GW + + + +L + L+A ++ Sbjct: 316 GGVVIINPPYGKRMGEEDELKELYCQIGDILKQRCQGWTGYVLTGNLELAKYIGLKASRR 375 Query: 363 YKAKNGPLDCVQKNYHVA 380 + NGP++C Y + Sbjct: 376 FVLYNGPIECRLLKYELY 393 Score = 42.2 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 27/78 (34%), Gaps = 3/78 (3%) Query: 564 TTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSK 623 + D L A RN G G+ H + L R E ++ I+PP Sbjct: 274 VSGYDSDSRALSIARRNAAAAGFEGQVHFFHSS--LEQFRPEGEG-GVVIINPPYGKRMG 330 Query: 624 RMEDAFDVQRDHLALMKD 641 ++ ++ ++K Sbjct: 331 EEDELKELYCQIGDILKQ 348 >UniRef50_C9Q0K8 THUMP domain/methyltransferase domain protein n=25 Tax=Bacteroidales RepID=C9Q0K8_9BACT Length = 513 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 130/418 (31%), Positives = 218/418 (52%), Gaps = 9/418 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 L A T GLE +L EL +GA Q+ + V F GD +Y++ A RI+ P+ Sbjct: 3 FELIAKTFMGLEPVLAKELTQMGANNVQIGRRMVSFTGDKETMYRANFQLHTAIRILKPI 62 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 + K S D+Y +Q I+W++ G TF+V ++ RNS++ KVKDAIVD F Sbjct: 63 AKFKAKSADDVYEEIQKIDWSQHIEDGKTFSVDSVVYSEEFRNSRFVTYKVKDAIVDQFR 122 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 + RPN+ PDIR+N+ + + +++LD SG+ LH RGYR + AP+ E LAA + Sbjct: 123 ERTGKRPNISVSNPDIRLNIHIAEYDCTLSLDSSGESLHRRGYRQESVEAPLNEVLAAGM 182 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 ++ +GWQ T +DPMCGSGTL++EAA++A + +PG+ R + F W D+ ++ + Sbjct: 183 ILMTGWQGETDFIDPMCGSGTLVVEAALIARNISPGVFRKNYAFEKWPDFDQELFDNIYN 242 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 + E++ H YG D D + + AR N R +G+ + IT E D P K Sbjct: 243 D-----DSNEREFTHHIYGYDIDMKAVNTARLNVRASGLTKDITIEQADFKDFKKPENKS 297 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 +++NPPYGER+ + P L+ + ++G +K+QF G + + S + + L+ Sbjct: 298 ---ILVTNPPYGERIST-PNLLGTYKMIGERLKHQFMGNDAWVLSYREECFDQIGLKPSI 353 Query: 362 QYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYR 419 + NG L+C + Y + + + T+ ++ + + ++ + + Sbjct: 354 KIPVYNGSLECEFRKYAIFDGSLRDFRQEGGVVKTDDEKRQMAEKNRFKKNREFKKRL 411 >UniRef50_B5CV55 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CV55_9BACE Length = 506 Score = 443 bits (1141), Expect = e-123, Method: Composition-based stats. Identities = 121/396 (30%), Positives = 213/396 (53%), Gaps = 9/396 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 L A T +GLEE+L EL LGA ++ + V F GD ++Y++ R A RI+ P+ Sbjct: 5 FELIAKTFQGLEEVLAQELTELGASNIEIGRRMVSFTGDKAMMYKANFCLRTAIRILKPI 64 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 + ++Y V++I W + ++F+V ++ R+S++ A KVKDA+VD F Sbjct: 65 KHFTAKTADEVYEAVKSIAWENYLDNMSSFSVDAVVFSNEFRHSKFVAYKVKDAVVDYFR 124 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 K RP++ PD+ +++ + +E ++ALD SG+ LH RGYR AP+ E LAA + Sbjct: 125 EKTGNRPSIRISNPDLAIHIHIAEEECTLALDSSGESLHRRGYRQEQVEAPLNEVLAAGM 184 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 ++ +GW+ L+DPMCGSGT+ IEAA++A + APG+ R +GF W D+ ++ + Sbjct: 185 ILMTGWRGECDLIDPMCGSGTIPIEAALIARNIAPGVFRKEFGFEKWKDFDQDLFDAIYN 244 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 + E++ YG D++ + + A+ N + AG+ + + +++ Q P K Sbjct: 245 D-----DSQEREFTHKIYGYDNNPKANEIAQHNVKAAGVSKDVILKIQPFQQFEQPAQKS 299 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 +++NPPYGER+ SE L+ L+ ++G +K+ F G + + S + + L+A Sbjct: 300 ---IIITNPPYGERISSE-DLLGLYQMIGERLKHAFTGNDAWILSYRDECFDQIGLKASI 355 Query: 362 QYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTN 397 + NG L+C + Y + + + ++ Sbjct: 356 KVPLFNGALECQFRKYQLFDGKYKEFRSDNSDKEFK 391 >UniRef50_Q2YA86 Putative RNA methylase n=3 Tax=Betaproteobacteria RepID=Q2YA86_NITMU Length = 399 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 130/397 (32%), Positives = 205/397 (51%), Gaps = 7/397 (1%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 ++ FA RG+E L ELE LGA GGV F+GD Y++ + SR+ASRI+ Sbjct: 3 LHHFFAPCPRGVESGLVAELECLGASAINPQDGGVEFQGDWDTCYRTNLESRIASRILWR 62 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + +++D+Y + + W + F+P T V+ + + +++ + +K+KD + D F Sbjct: 63 VASEPYATEIDVYKVARQLPWHDWFSPALTIKVNVAAIRCPLQSLDFVTLKIKDGVCDRF 122 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RP+VD PDIR++ +L S+ LD SGD L RG R G AP++E LAA Sbjct: 123 REVAGNRPSVDTVQPDIRIHGFLDARRISLYLDTSGDALFKRGLRKNTGEAPLRENLAAG 182 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 I+ + W+PG PLLDPMCGSGT L+EAA +A + PGL R + F D+ W++++ Sbjct: 183 ILSLADWRPGIPLLDPMCGSGTFLLEAAQIALNIPPGLGRS-FAFEKLRIFDKKRWEQIR 241 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 A + + +GSD I A+ N AG+ E +T + +V +L+ P Sbjct: 242 KAAIAGQKT---KSQQPIFGSDLYGNAIAVAQANLSAAGLSEAVTLKQANVLELSAP--- 295 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G +++NPPYG RL + L+ + LG ++K +F GWN + +A P L ++L A Sbjct: 296 ASSGFLVTNPPYGVRLGEQKQLMEFYPKLGDVLKKKFSGWNAYILTADPQLPKLIRLTAS 355 Query: 361 KQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTN 397 ++ NG L+C Y + + Sbjct: 356 RRIPLFNGALECRLLEYKIVSGGMRKTKKTATGEPGR 392 >UniRef50_C6WWA7 Putative RNA methylase n=2 Tax=Betaproteobacteria RepID=C6WWA7_METML Length = 421 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 128/389 (32%), Positives = 208/389 (53%), Gaps = 7/389 (1%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 N FA+ RGLE+LL EL+ + A V GGV F GD + Y + + SRLA+RI+ + Sbjct: 39 NRYFATCPRGLEQLLADELKQISAKVVNVTDGGVSFDGDWSICYAANLHSRLATRILWQV 98 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 G K ++ DL+ +NW + F+ F V +G+ +++ ++ +K+KDA+ D F Sbjct: 99 GRGKYLNEEDLFNAAYKMNWPQWFDVKHDFMVKVTGVKCPLKSLEFATLKIKDAVCDKFR 158 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 + RP +D P +R++ +L + +D SG L+ RG R + AP++E LAA I Sbjct: 159 QAVGSRPYIDTKTPSVRIHAYLTTDEYQYYVDTSGAALYQRGNRGASIEAPLRENLAAGI 218 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + +GWQ G PLLDPMCGSGT L+EAAM+A D APG+ R +GF + W+++K Sbjct: 219 LKLTGWQVGQPLLDPMCGSGTFLLEAAMVALDMAPGIKR-EFGFEKLKTFESDTWKKIKN 277 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 +A ++ +K + YGSD D R ++ + N AG+ E + D+ + P+ Sbjct: 278 QALSKVKKVSFQ---KIYGSDMDLRAVRVTKQNLEAAGLLEAVQVSHVDMLNVIPPVD-- 332 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 +G +++NPPYG R+ + L L+ +G +K++F GWN + + ++L K Sbjct: 333 -HGVLVANPPYGVRIGEDEVLTLLYPKMGETLKHKFAGWNTYFLTNDLRMPKLMRLSPSK 391 Query: 362 QYKAKNGPLDCVQKNYHVAESTPDSKPAM 390 + NGPL+C + + Sbjct: 392 KTPLFNGPLECRLFEIKMVAGSNRKDKPE 420 >UniRef50_Q9KC03 BH1771 protein n=3 Tax=Bacillales RepID=Q9KC03_BACHD Length = 385 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 117/389 (30%), Positives = 190/389 (48%), Gaps = 8/389 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +L A+ GLE L+ E+++LG + +V G V F D + ++ +W R A R+ L +G Sbjct: 5 TLIATATMGLEALVAREVKDLGYEDVKVENGKVTFTSDVAAIPRANLWLRTADRVKLKVG 64 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 E K + +L+ +++ W ++ A F V + + + VK A+V++ + Sbjct: 65 EFKALTFDELFEKTKSLPWADIIPVHAEFPVIGRSVKSKLFSVSDCQAIVKKAVVESMKK 124 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + R D + P R+ V LHK+ A++ +D SG GLH RGYR AP+KETLAAAI+ Sbjct: 125 RY-KRGWFDENGPLYRIEVALHKDIATLTIDTSGTGLHKRGYRYLHSQAPLKETLAAAII 183 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 M S W+ P DP CGSGT+ IEAAM+ + APG +R + W W + E Sbjct: 184 MLSHWKSDRPFADPFCGSGTIPIEAAMIGQNIAPGFNR-EFVSEQWHWIGSEHWDRAREE 242 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 + A + GSD D R+++ A+ NA AG G+LI+F+ V K Sbjct: 243 VEDMAN---YDQPLDILGSDIDHRMVELAQNNAMEAGFGDLISFKQMQVTDFR---HKEE 296 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 YG ++ NPPYGER+ + ++ +G + + W++ + ++ RA K+ Sbjct: 297 YGILIGNPPYGERIGEREEVEKMYQKMGEVFREHLETWSIYILTSHEGFEELYGKRATKK 356 Query: 363 YKAKNGPLDCVQKNYHVAESTPDSKPAMV 391 K NG + + + + Sbjct: 357 RKLYNGNIKTDYYQFFGPRPPRHPEGSQQ 385 >UniRef50_A0M2L5 Protein belonging to UPF0020-possibly an RNA methylase n=20 Tax=Bacteroidetes RepID=A0M2L5_GRAFK Length = 386 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 125/391 (31%), Positives = 200/391 (51%), Gaps = 8/391 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 + A T G E +L EL +LGA++ + V F GD +Y++ + R A +I+ P Sbjct: 4 YRMIAKTLYGFESILAKELLDLGALDIKEGNRMVSFAGDKGFMYKANLCLRTAIKILKPY 63 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 +V S+ +LY ++ + W + + A+ + ++ +SQY A+K KDAIVD F Sbjct: 64 ESFRVNSEQELYDNIKKLPWEKFLADDGSLAIDSAVHSEIFTHSQYVALKSKDAIVDRFR 123 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 K RP+VD D PD+R+N+ + +++ D SGD LH RGYR IAPI E LAA + Sbjct: 124 EKFGKRPDVDLDFPDLRINIHIENNFCNVSFDSSGDSLHKRGYRTATNIAPINEVLAAGM 183 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 ++ SGW LDPMCGSGT+ IEAAM+A + P L+R + F W DE ++++++ Sbjct: 184 LLMSGWDGQCDFLDPMCGSGTIPIEAAMIACNIPPNLNRKEFAFEKWNDWDEDLYEKIEE 243 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 A + R ++ G D I +A+ N + A + + I E + + K Sbjct: 244 SAMKKVR----DFHFKIKGYDKAPSAIMKAKDNVKNANLSDFIDIEQRSFFESEK--QKE 297 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 Y +L NPPYGERL E + + +G +K + G + + + + + + LRA + Sbjct: 298 GYLHMLFNPPYGERL--EIDIEDFYGKIGDTLKQNYPGTHAWFIATNFEAIKSVGLRASR 355 Query: 362 QYKAKNGPLDCVQKNYHVAESTPDSKPAMVA 392 + K NGPL+ Y + E + Sbjct: 356 KIKLYNGPLEARLLKYVLYEGSKKKSKQENN 386 >UniRef50_UPI0000E87EDF Putative RNA methylase:THUMP n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87EDF Length = 378 Score = 433 bits (1115), Expect = e-120, Method: Composition-based stats. Identities = 130/378 (34%), Positives = 205/378 (54%), Gaps = 9/378 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 + FAS RGLEE+L+ EL + A + + V GG+ F GD ++Y++ + SR+A+RI+ + Sbjct: 3 HHYFASCPRGLEEVLQQELMEIHANDIKRVDGGMLFSGDKEVLYKANLSSRIATRILCLV 62 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 + ++ D++ ++ WT F T V + + +++ + +++KDA+ D F Sbjct: 63 KQGSYENEDDIFNAALSVEWTTWFALEKTIKVSTTAIQCPLKSIDFMTLRIKDAVCDIFR 122 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 K RP+V+ PDIR++++L K S+ +D SG LH RG+R + APIKE LAA I Sbjct: 123 EKTGKRPDVEVRDPDIRIHLFLEKNNFSLYIDTSGAPLHQRGFRTASVEAPIKENLAAGI 182 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + SGW PG P LDPMCGSGT LIEAAM+A+++APGL+R +GF W D ++ +K Sbjct: 183 IKLSGWNPGEPFLDPMCGSGTFLIEAAMIASNQAPGLNRN-FGFMAWKSFDNILFSTIKK 241 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 + + YGSD D R I+ ++ N LAG + K +++T P Sbjct: 242 TYMDQV---TKKDFLKIYGSDKDLRAIRVSKKNLTLAGFENSVQLVCKQFSEITPPY--- 295 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 G +++NPPYGER+ E L + + +K F GW + + ++L K Sbjct: 296 SEGVLVTNPPYGERIGEE--LDSAYPEWATSLKQSFAGWRTYFLTNDFRMPKLMRLSPSK 353 Query: 362 QYKAKNGPLDCVQKNYHV 379 + NG LDC + Sbjct: 354 KTPLYNGALDCRLFEIKM 371 >UniRef50_A0Q0L2 Nucleic acid methylase n=6 Tax=Clostridiales RepID=A0Q0L2_CLONN Length = 384 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 123/390 (31%), Positives = 199/390 (51%), Gaps = 10/390 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 L A++A G+E L+ EL+ LG +V G V + GD + +S +W R A R+ + L Sbjct: 4 YELVATSAFGIEGLVSKELKRLGYKNLKVENGKVTYNGDEECICKSNLWLRCADRVYIKL 63 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 E K + DL+ G + I W+ A F V+ + T+ + K AIV+ Sbjct: 64 AEFKATTFEDLFQGTKRIPWSNFLPEDANFIVNAKSVKSTLFSLSDIQSICKKAIVENLK 123 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 + + + + + ++ LD SGD LH RGYR++ +AP+KETLAAA+ Sbjct: 124 EEYNV-EWFSESGSVYPILISILNDEVTVLLDTSGDALHKRGYREKGSLAPLKETLAAAL 182 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAI-WQEVK 240 V+ S W+ +DP CGSGT+ IEAAM+A + APGL+R + W ++ W++V+ Sbjct: 183 VILSNWRYDRLFIDPFCGSGTIPIEAAMIARNIAPGLNRT-FACENWDFIISSLTWKKVR 241 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 EA + + H +G D D+++I AR NA AG+ + I F+ + V +L+ Sbjct: 242 KEAYEAI---MYDKEYHIFGYDKDSKIIPVARENAVKAGVDDCIHFQTQPVQELSTHY-- 296 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 YGT++ NPPYGERL+ + + AL+ +G++ F W+ + ++ D C ++D Sbjct: 297 -NYGTIVCNPPYGERLNEKDEVEALYRDMGKVFSK-FDTWSKFVITSYSDFEKCFGKKSD 354 Query: 361 KQYKAKNGPLDCVQKNYHVAESTPDSKPAM 390 K K NG + C Y + +K Sbjct: 355 KNRKLYNGRIQCYYYQYIGPKPPRRNKDMD 384 >UniRef50_B6BTD9 N6-adenine-specific DNA methylase n=1 Tax=beta proteobacterium KB13 RepID=B6BTD9_9PROT Length = 387 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 132/389 (33%), Positives = 198/389 (50%), Gaps = 8/389 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 SLFA+ RGLE+ L E+ +L + +V GGV F G+ ++ + SR A+R++ L Sbjct: 7 SLFATCPRGLEKFLFNEIRSLDGQKIKVHDGGVSFNGNQDSMHSLNLTSRYATRVLKRLS 66 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + S+ DLY + W ++F T V + + ++++ + +K+KDAI D F + Sbjct: 67 YGQFKSENDLYQAAMKVKWDDIFPVNKTIKVSTTSIKTSLKSIDFVTLKIKDAICDVFNQ 126 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 K RPNVD PDI+V+++L K I +D SG L+ RGYR + AP+KE LAA I+ Sbjct: 127 KYKLRPNVDVRDPDIKVHLFLEKNNFIIYIDSSGKPLYQRGYRQKTIEAPLKENLAAGII 186 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 S W PLLDPMCGSGTL IEAAM+A + PG++R +GF W D+ ++ ++K + Sbjct: 187 TLSDWDFKEPLLDPMCGSGTLPIEAAMMALNIYPGMNRT-FGFHHWHDFDKEVFHKIKVQ 245 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 + + E H Y SD D + A TN G+ I + P Sbjct: 246 LKEK----QIEKELHIYASDIDRQAFNAASTNIDQMGLKPYIRINNRRFETSNAP---ND 298 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 +G ++ NPPYG RLD L+ + L G ++K +F GW S L+L A K+ Sbjct: 299 HGVIVCNPPYGVRLDESEKLLESYQLWGSVLKKEFSGWRAYFISNDIAFPRGLRLSASKK 358 Query: 363 YKAKNGPLDCVQKNYHVAESTPDSKPAMV 391 NG LDC + + + Sbjct: 359 TPLYNGALDCRLFEFVMVTGSNRKLKQEN 387 >UniRef50_C2MBZ0 THUMP domain protein n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MBZ0_9PORP Length = 475 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 130/413 (31%), Positives = 207/413 (50%), Gaps = 15/413 (3%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + + A T GLE +L+ EL LGA Q+ + V ++GD +++Y+S ++ R A +++ P Sbjct: 4 IFPMIAKTLPGLEPVLEQELIALGANNIQIGRRMVSYEGDLKMLYKSNLYLRTALKVLRP 63 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + E LY + +W++ TFAV + T ++S+Y K KDAIVD F Sbjct: 64 IYEFDAEDIDILYTTLLHFDWSQWLTADMTFAVDAVVYSSTFKHSRYVVYKTKDAIVDYF 123 Query: 121 TRK--NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLA 178 + RP+V P + ++ + ++ ++ LD SG+ LH RGYR API E LA Sbjct: 124 REQTSGTKRPSVKLSNPQLIFHLHIAEQHVTLCLDSSGESLHKRGYRMEQDRAPINEVLA 183 Query: 179 AAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 A I++++GW L+DP CGSGT L+EAA++AT PG++R + F W D + E Sbjct: 184 AGILLKAGWHGQCDLMDPFCGSGTFLVEAALIATGTPPGIYRESYPFERWPDFDSELCSE 243 Query: 239 VKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 V + + H YGSD + I +A+ N +G+ I V D A P Sbjct: 244 VYND-----DSTERSFDYHIYGSDLSPQAIAKAKRNVTRSGMSRYIDLSVGDFADQHLPH 298 Query: 299 PK---GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCL 355 P+ P ++ NPPYGERL S+ L L+S++GR +K QF G + + + + Sbjct: 299 PEAETEPKCLLVMNPPYGERL-SDYDLEQLYSMIGRTLKFQFAGAQAWIIAHQVEHFHAI 357 Query: 356 QLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEK 408 L+ D + + NG L C + Y + E E R + ++ E+ Sbjct: 358 GLKHDLREELYNGSLPCELRGYTLFEGKHKEYK----EQIAQRGEEAPQRRER 406 >UniRef50_A8FEF3 Site-specific DNA-methyltransferase (Adenine-specific) n=14 Tax=Bacilli RepID=A8FEF3_BACP2 Length = 384 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 121/389 (31%), Positives = 189/389 (48%), Gaps = 10/389 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 +L A+ G+E ++ E+ +LG +C V G V F+GD + ++ +W R A RI + + Sbjct: 4 YTLIATAPMGIEAIVAKEVRDLGY-DCTVDNGKVIFEGDALAICRANLWLRTADRIKVQV 62 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 E + +L+ +AI+W +TF V + + + VK AI Sbjct: 63 AEFSAKTFDELFERTKAIDWAAFLPKNSTFPVIGKSVKSQLASVPDCQRIVKKAIAQKLI 122 Query: 122 RKNLPRP-NVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + ++ P+ ++ V L K+ A + LD SG GLH RGYR G APIKETLAAA Sbjct: 123 SSYNIQSEWLEETGPEYKIEVALLKDKAVLTLDTSGVGLHKRGYRMDQGGAPIKETLAAA 182 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +V+ + W P P +DP CGSGT+ IEAAM+ + APG +R + W E +W + + Sbjct: 183 LVLLTNWTPDRPFVDPFCGSGTIAIEAAMIGQNIAPGFNRD-FASESWEWIGEDVWNKAR 241 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 E + +A + H SD D R+I A+ NA AG+ ELI F+ V + Sbjct: 242 HEVEEKAN---YDQPLHIIASDIDHRMIDIAKMNAEEAGLSELIEFKQMQVKDFQTKVD- 297 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 YG ++ NPPYGERL +PA+ ++ +G K+ W++ + ++ C +A Sbjct: 298 --YGVIVGNPPYGERLSDKPAVEKMYQGMGEAFKS-LDTWSIYILTSHEKFEECFGRKAT 354 Query: 361 KQYKAKNGPLDCVQKNYHVAESTPDSKPA 389 K+ K NG + Y Sbjct: 355 KKRKLFNGFIKTDYYQYWGKRPPRKQTTE 383 >UniRef50_UPI00016C3D60 hypothetical protein GobsU_18040 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3D60 Length = 375 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 141/380 (37%), Positives = 217/380 (57%), Gaps = 5/380 (1%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M FA+ ARGLE +L +EL+ LGA + +GGV F+G L+Y++ +W R A R++ P Sbjct: 1 MTRYFATCARGLEPVLASELDALGAEAVEPGRGGVTFQGPPALLYRACLWLRTAVRVLRP 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + E +V++ +LY V++INW + P T AV + + + +SQY A +VKDAI D F Sbjct: 61 VHEFEVHNSDELYDAVRSINWADWMTPDQTLAVDCNVRDSALTHSQYAARRVKDAICDQF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + RP+VD D P I +N+ + K A ++LD S LH RGYR IAP+ E LAA Sbjct: 121 RERVGRRPSVDPDQPMIGLNLHVSKNHAVLSLDSSWSSLHKRGYRPIQTIAPLNEALAAG 180 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +++R+ W TPL+DPMCGSGT +E A +A +R PGL R + F GW D +W ++ Sbjct: 181 LLLRAKWDKNTPLVDPMCGSGTFCVEGAWIALNRPPGLTRKWFAFQGWPDFDRTVWNAIR 240 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 +A+ L E + GSD + I A+ NAR AG+G L+ + ++ + P Sbjct: 241 DDARA---AVLKELPAPICGSDVRSDAISLAQMNARAAGVGHLLNLQKLELREARPPSDV 297 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 GT++ NPPYGER+ E LI L++ +G + K + GW L + +++ L ++L+ Sbjct: 298 --PGTLVCNPPYGERIGEEEELIPLYARIGAVAKEFWPGWRLLVLTSNTMLAKKIRLKVV 355 Query: 361 KQYKAKNGPLDCVQKNYHVA 380 + NG L+C + + Sbjct: 356 HKEPFFNGSLECFLWEFKTS 375 >UniRef50_A6T245 N6-adenine-specific DNA methylase n=9 Tax=Betaproteobacteria RepID=A6T245_JANMA Length = 406 Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 122/409 (29%), Positives = 192/409 (46%), Gaps = 20/409 (4%) Query: 2 NSLFASTARGLEELLKTELENLGA-----VECQVVQGGVHFKGDTRLVYQSLMWSRLASR 56 +S F RGLE L EL + V GGVH G + Y+ + SR+ASR Sbjct: 5 HSYFCPCPRGLEIALAEELNEIALLDKTLKVHTQVPGGVHCSGTLQDAYRINLHSRIASR 64 Query: 57 IMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAI 116 +++ + ++ D+Y A W + F T + + + +R+ ++ +K+KDAI Sbjct: 65 VLMRMAHASYTTENDIYDLTLAQAWEDWFEVDHTIRIDVTAIKSPLRSLEFTTLKIKDAI 124 Query: 117 VDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKET 176 D F RP+VD PD+R+ +L T ++ LD SG+ L RG+R G AP++E Sbjct: 125 CDRFRDIYNRRPSVDTKMPDMRIVGFLDARTFTLYLDTSGEALFKRGWRMETGDAPLREN 184 Query: 177 LAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 LAA ++ SGW+PG L DPMCGSGT+L EAA + PGLHR + F +A +A W Sbjct: 185 LAAGLLRTSGWKPGMTLFDPMCGSGTILAEAAQMLAGIPPGLHRD-FAFEKFAGFSKAEW 243 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 +K + +GSD ++ R N AGI + + + ++ Sbjct: 244 AAIK----ASVKPNPLPAEPTIFGSDISGDMVAMTRNNLNKAGIRFEVPLKQIEAQEVKA 299 Query: 297 PLPKGPYGTVLSNPPYGERLD--------SEPALIALHSLLGRIMKNQFGGWNLSLFSAS 348 P G +L+NPPYGER+ ++ S G +K +F GW + LF+A Sbjct: 300 P--SETPGVLLTNPPYGERIGVRGDSTVEADDMAKEFFSAFGTTLKQRFAGWKVFLFTAD 357 Query: 349 PDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTN 397 L L+L+ ++ NG L+C + + + A+ + Sbjct: 358 LGLPKLLRLKEARKTPFFNGALECRLFRFDMVAGFNRREQAIPKTEPKQ 406 >UniRef50_B7GKR8 Predicted N6-adenine-specific DNA methylase n=8 Tax=Bacteria RepID=B7GKR8_ANOFW Length = 379 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 121/383 (31%), Positives = 191/383 (49%), Gaps = 10/383 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +L A+ A GLE ++ E+ LG +CQV G V F D R + ++ +W R A R+ + +G Sbjct: 7 TLIATAAMGLESIVADEVRALGY-DCQVDNGKVMFVADERAICRTNLWLRTADRVKVKVG 65 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 E + + +L+ +A+ W + A F V + T+ + VK AIV+ + Sbjct: 66 EFRATTFDELFEQTKALPWAQFLPVDAQFPVVGKSVKSTLFSVSDCQAIVKKAIVEHLKQ 125 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + R+ V LHK+ A++ +D SG GLH RGYR + G AP+KETLAAA+V Sbjct: 126 HYGV-SWFEETGALFRIEVALHKDVATLTIDTSGAGLHKRGYRVKQGEAPLKETLAAALV 184 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 + W P P +DP CGSGT+ IEAA++ + APG +R + W+ +W E + E Sbjct: 185 RLTNWTPDRPFVDPFCGSGTIAIEAALIGQNIAPGFNRD-FVSEQWSWIPSHLWDEAREE 243 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 A+ AR + H G D D R++ A+TNA+ AG+ +LITF+ V K Sbjct: 244 AEDVAR---YDQPLHIVGFDIDHRMVDIAKTNAQEAGLADLITFKQMQVKDFRT---KEE 297 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 YG ++ NPPY ERL + + L+ +G W++ + ++ +A K+ Sbjct: 298 YGVIVGNPPYSERLGEKEEVEQLYREMGETF-AALDTWSIYILTSHRHFEQLYGKQATKR 356 Query: 363 YKAKNGPLDCVQKNYHVAESTPD 385 K NG ++ + Sbjct: 357 RKLFNGFIETQYYQFWGPRPPRS 379 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 47/171 (27%), Gaps = 47/171 (27%) Query: 532 MLGQMSKGKDFLNLFSYTGSATVHAGLGG------------------------------- 560 L + + F++ F +G+ + A L G Sbjct: 185 RLTNWTPDRPFVDPFCGSGTIAIEAALIGQNIAPGFNRDFVSEQWSWIPSHLWDEAREEA 244 Query: 561 ---AR-----STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLI 612 AR D+ ++ A+ N + GL Q + E++ +I Sbjct: 245 EDVARYDQPLHIVGFDIDHRMVDIAKTNAQEAGLAD-LITFKQMQVKDF--RTKEEYGVI 301 Query: 613 FIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRM 663 +PP E+ + R+ L +I + R F Sbjct: 302 VGNPPYSERLGEKEEVEQLYREMGETFAALDTW-----SIYILTSHRHFEQ 347 >UniRef50_Q7NRS5 Probable oxidoreductase n=1 Tax=Chromobacterium violaceum RepID=Q7NRS5_CHRVO Length = 397 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 140/394 (35%), Positives = 209/394 (53%), Gaps = 7/394 (1%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 +FA RGLE++L EL LGA + GGV F GD RL+ + SR ASR++L L Sbjct: 7 MFAPCPRGLEQILADELLALGAGDIAPADGGVAFAGDARLMMAVNLHSRTASRVLLRLAH 66 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 +++ D+Y +++W F T + G+ +++ Y + VKDAI D F + Sbjct: 67 GGYHAEQDIYRLAMSVDWPRWFEVSRTIKLKADGIAARVKSLDYIGLTVKDAICDRFRQA 126 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 +L RP+VD PD+RVNV+L + A+I LD SG+ L RG+R+ G AP++E LAA I++ Sbjct: 127 HLGRPSVDTRHPDVRVNVFLTADEATIYLDTSGEPLFKRGWREETGEAPLRENLAAGILL 186 Query: 184 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEA 243 +G+ PLLDPMCGSGT L+EAA +A +RAPG R R+GF + D A W++++ +A Sbjct: 187 LAGYDGSQPLLDPMCGSGTFLVEAADIALNRAPGRAR-RFGFEALSSFDSAAWEKLQQDA 245 Query: 244 QTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPY 303 + + S GSD ++ AR N AG+ EL+ DV + Sbjct: 246 RKAEQPA---SSLAIRGSDRSQAMVNIARANLERAGLAELVEVSAADVTASRP---HAEH 299 Query: 304 GTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQY 363 G ++SNPPYG RL+ + L A + LG +K F GW LFS L ++L ++ Sbjct: 300 GLIVSNPPYGVRLEEQDQLAAWYPELGDWLKAHFAGWTACLFSGDLRLGKLIRLAPKRRT 359 Query: 364 KAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTN 397 NG L C ++ E + + + Sbjct: 360 PLFNGSLQCRLFVINMVEGSARKQKDGDEAEIET 393 >UniRef50_C0DRY4 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DRY4_EIKCO Length = 420 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 140/388 (36%), Positives = 211/388 (54%), Gaps = 7/388 (1%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 +++LFA+ RGLE +L EL+ G GGV +G Y++ + SR ASRI+L Sbjct: 38 IHTLFATCPRGLETILTQELDAQGCTHIAPTDGGVSCQGSLEAAYRANLHSRTASRILLQ 97 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L + S+ D+Y ++I W + F+ G TF + G +++ + A+K+KD + D F Sbjct: 98 LAKQPYRSEDDIYRAAKSIRWEDWFHAGQTFKIKVEGKRARVKSLDFTALKIKDGLCDRF 157 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RP+VD+ P IR++ ++ ++ A+I +D SG+ L RGYR G AP++E LAA Sbjct: 158 RSNQGQRPSVDKSNPHIRIHAFISEQHAAIFIDTSGEALFKRGYRQDTGAAPLRENLAAG 217 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +++ +G+ P DP CGSGTL IEAA++AT RAPGL R R+GF D +WQ ++ Sbjct: 218 LLLLAGYNGSQPFQDPFCGSGTLPIEAALIATRRAPGLER-RFGFEQLDNFDADLWQRLR 276 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 EAQ L + + GSD+D R+IQ A NAR A + I F+V DV Sbjct: 277 QEAQA---AVLPQAPAPIAGSDTDRRLIQTAAINAREAQVAGHIIFQVADVRDTRP---N 330 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G G +L+NPPYG RL+ L AL+ LG +K + GW L +A D+ ++L Sbjct: 331 GENGILLANPPYGVRLEEVQTLHALYPQLGSWLKQHYPGWLCGLLTADRDMPKLMRLSPK 390 Query: 361 KQYKAKNGPLDCVQKNYHVAESTPDSKP 388 ++ NG LDC + + + Sbjct: 391 RKIPLYNGNLDCRLFLLDMVRGSHRTPK 418 >UniRef50_P50840 Putative RNA methyltransferase ypsC n=152 Tax=Firmicutes RepID=YPSC_BACSU Length = 385 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 118/390 (30%), Positives = 192/390 (49%), Gaps = 10/390 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 +L A+ G+E ++ E+ +LG C+V G V F+GD + ++ +W R A RI + + Sbjct: 4 YTLIATAPMGIEAVVAKEVRDLGYE-CKVDNGKVIFEGDALAICRANLWLRTADRIKVQV 62 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 K + +L+ +AINW F V + T+ + VK AIV+ Sbjct: 63 ASFKAKTFDELFEKTKAINWRSFIPENGKFPVIGKSVKSTLASVPDCQRIVKKAIVEKLK 122 Query: 122 RKNLPRPN-VDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 ++ + ++ + +V + L K+ A I LD SG GLH RGYR G APIKETLAAA Sbjct: 123 LQSGKANDWIEETGAEYKVEISLLKDQALITLDSSGTGLHKRGYRVDQGGAPIKETLAAA 182 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +V + W P P +DP CGSGT+ IEAA++ + APG +R + W + +W + + Sbjct: 183 LVQLTNWTPDRPFVDPFCGSGTIAIEAALIGQNIAPGFNRD-FVSEDWEWIGKDLWNKAR 241 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 E + +A + + SD D R++Q A+ NA AG+G+LI F+ V T Sbjct: 242 LEVEEKAN---YDQPLTIFASDIDHRMVQIAKENAEEAGLGDLIQFKQMQVKDFTT---N 295 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 +G ++ NPPYGERL + A+ ++ +G+ W++ + +++ + +A Sbjct: 296 LEFGVIVGNPPYGERLGEKKAVEQMYKEMGQAF-EPLDTWSVYMLTSNENFEEAYGRKAT 354 Query: 361 KQYKAKNGPLDCVQKNYHVAESTPDSKPAM 390 K+ K NG + Y K Sbjct: 355 KKRKLFNGFIKTDYYQYWSKVRPQRKKTEN 384 >UniRef50_C4ZFU5 Nucleic acid methylase n=25 Tax=Firmicutes RepID=C4ZFU5_EUBR3 Length = 423 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 125/388 (32%), Positives = 188/388 (48%), Gaps = 9/388 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 L GLE ++K E+ +LG +V G V F+GD + ++ ++ R A R++L + Sbjct: 44 FELVVPCHFGLEAVVKREIYDLGYEITRVEDGRVSFEGDAEAICRANIFLRGAERVLLQV 103 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVH-FSGLNDTIRNSQYGAMKVKDAIVDAF 120 G K + +L+ V+A+ W F V S + + + VK A+V+ Sbjct: 104 GRFKAATFDELFENVKALPWENYIPKDGRFWVKKASSIKSKLFSPSDIQSIVKKAMVERM 163 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 R D V V+L+K+ + LD SGD LH RGYR AP+ ETLAA+ Sbjct: 164 KRSYHI-DWFPEDGAQYPVRVFLYKDEVMVTLDTSGDSLHKRGYRLATSKAPLTETLAAS 222 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 ++M + W L+DP CGSGT IEAAM+A + APG++R S +W E Sbjct: 223 LIMLTPWHADRILVDPFCGSGTFPIEAAMMAANIAPGMNREFTAESWTNIIPRKLWYEAV 282 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 EA+ K + G D D V+ AR NA+ AG+ +I F+ + VA L +P Sbjct: 283 QEAEDMIDK---DVQVDIQGYDIDPDVVAAARENAKRAGVEHMIHFQQRAVADLHHP--- 336 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 YG ++SNPPYGERL+ + AL AL+S +G K W++ L ++ D + +AD Sbjct: 337 KKYGFIISNPPYGERLEEKSALPALYSQIGEAYKR-LDAWSMYLITSYEDTERYIGRKAD 395 Query: 361 KQYKAKNGPLDCVQKNYHVAESTPDSKP 388 K K NG + + + K Sbjct: 396 KNRKIYNGMIKTYFYQFMGPKPPRRKKD 423 >UniRef50_Q6MPB2 Putative N6-adenine-specific DNA methylase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPB2_BDEBA Length = 374 Score = 420 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 147/380 (38%), Positives = 222/380 (58%), Gaps = 6/380 (1%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M FASTARGL E L+ EL+ LG GGV F+ + Y++ + SRLASRI+ P Sbjct: 1 MPQFFASTARGLVEPLELELKELGLKVTDRYIGGVFFESNWEGCYKANLHSRLASRILKP 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + + Y +LY + ++T+ P T ++ S +R+ ++ AMKVKDAIVD F Sbjct: 61 VLDFTAYQPEELYSQILRHDFTKYIKPTQTISIDASVNESKMRDQRFVAMKVKDAIVDQF 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 K RP+VD PD+R++V K ++A+D SGD L RGYR G AP+KE LAA Sbjct: 121 REKFGVRPDVDNTNPDLRIHVRAIKNQFNVAIDTSGDSLFKRGYRKEVGEAPLKENLAAG 180 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 ++ S W +PL+D MCGSGT LIEAAM++ + APG++R +GF W ++E W++V Sbjct: 181 LLRLSEWDRQSPLVDFMCGSGTFLIEAAMMSMNIAPGINRKGFGFQNWLNYEEETWEKVI 240 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 EA + E FYG D D RV+ A+ NA+ AG+ E+I F+ + VA + P+ K Sbjct: 241 QEAMDAEK---EELDFKFYGFDIDKRVLMNAKDNAKRAGVDEVIEFKKESVATVEPPVEK 297 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G ++ NPPYG R+ E L ++ L MK++F GW+ + S + +L++ L+L++ Sbjct: 298 ---GLIIVNPPYGARIGDEDNLRDVYRDLSFTMKHRFKGWDAWILSGNKELIADLKLKST 354 Query: 361 KQYKAKNGPLDCVQKNYHVA 380 +++ NG ++C Y + Sbjct: 355 RKHFVFNGNIECRFLKYSMF 374 >UniRef50_Q2L074 Putative methylase n=4 Tax=Bordetella RepID=Q2L074_BORA1 Length = 535 Score = 420 bits (1080), Expect = e-116, Method: Composition-based stats. Identities = 127/389 (32%), Positives = 202/389 (51%), Gaps = 11/389 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + +A +GLE+ L E++ LG + Q + G F D + ++ ++SRLA+RI++ Sbjct: 153 IFRCYAPCPQGLEDALTAEMQALGFDDAQAGRAGCGFTSDWSGIQRANLYSRLAARILVQ 212 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 +G + + +L ++ W F P T V S + + + QY ++VKD I D Sbjct: 213 VGAGNLNHEDELLDLAYSVPWENWFGPEDTLRVDTSAIKSPVHSLQYCNLRVKDGICDRL 272 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + RP++D PD RV +++ A++ LD SG+ L RG+R G AP++E LAA Sbjct: 273 RDREGARPSIDTVRPDARVQLFMEGTHATLYLDTSGESLFKRGWRLDKGEAPLRENLAAG 332 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 ++ +GW P PLLDP CGSGT+LIEAA +A PG+ R +GF QHD W+++K Sbjct: 333 MLALAGWDPSAPLLDPFCGSGTILIEAAWIALGVPPGISRP-FGFERMRQHDARRWRDLK 391 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGI-GELITFEVKDVAQLTNPLP 299 +A++R R L + G D D R I+ AR NA A + E I FEV D + P Sbjct: 392 DDARSRIRTQL---ETPLIGYDIDERAIEFARANAERAWLTEETIRFEVGDARHVKAP-- 446 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 G +++NPPYGER++ +K++F GW + S+ L ++L+ Sbjct: 447 -ASQGWIVTNPPYGERMEIADD---FWREWSACLKHEFAGWQAHIISSDMKLPQRMRLKP 502 Query: 360 DKQYKAKNGPLDCVQKNYHVAESTPDSKP 388 ++ NG LDC + + ++ P Sbjct: 503 VRRIPLHNGSLDCRLFAFELVQAGYRDGP 531 >UniRef50_Q7P2H5 METHYLTRANSFERASE n=10 Tax=Fusobacterium RepID=Q7P2H5_FUSNV Length = 379 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 121/381 (31%), Positives = 188/381 (49%), Gaps = 9/381 (2%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 AST GLE ++K E LG +V G V F+GD + + ++ ++ R + RI + + E Sbjct: 3 FIASTTMGLESIVKDECLGLGFKNIKVFDGRVEFEGDFKDLVKANIYLRCSDRIFIKMAE 62 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVH-FSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 K + +L+ +++INW + + F + S + + + K AIV+ Sbjct: 63 FKALTYEELFQNIKSINWQDYIDEDGEFPISWVSSVKSKLYSKSDIQRISKKAIVEKLKE 122 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 K R + + + HK+ + LD SG+ L RGYR + +APIKETLAAA+V Sbjct: 123 KY-KREIFLENGALYSIKIQCHKDIFIVMLDSSGEPLTKRGYRAQKRVAPIKETLAAALV 181 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 S W+ LLDPMCG+GT+ IEAAM+A + APG +R + W+ D+ +W +++ E Sbjct: 182 YLSKWKADEVLLDPMCGTGTITIEAAMMARNIAPGANRN-FAAEKWSIIDKNLWTDIRDE 240 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 A + Y SD D R I+ A+ NA AG+ E I F+VKD + +P Sbjct: 241 AFSNEDLSK---ELKIYASDIDKRSIEIAKENAEKAGVEEDIIFDVKDFKDIESP---AK 294 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 YG ++ NPPYGERL + + L+ G K + W+ + ++ D +A K Sbjct: 295 YGAMIVNPPYGERLMGDEDIEKLYRNFGDFCKKKLSKWSYYIITSYEDFEKAFDKKATKN 354 Query: 363 YKAKNGPLDCVQKNYHVAEST 383 K NG + C Y Sbjct: 355 RKLYNGGIKCYYYQYFGDRKN 375 Score = 49.9 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 20/149 (13%), Positives = 38/149 (25%), Gaps = 42/149 (28%) Query: 532 MLGQMSKGKDFLNLFSYTGSATVHAG------LGGARS---------------------- 563 L + + L+ TG+ T+ A GA Sbjct: 182 YLSKWKADEVLLDPMCGTGTITIEAAMMARNIAPGANRNFAAEKWSIIDKNLWTDIRDEA 241 Query: 564 -----------TTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLI 612 D+ + +E A+ N G+ D + ++ + Sbjct: 242 FSNEDLSKELKIYASDIDKRSIEIAKENAEKAGVEEDII-FDVKD-FKDIESP-AKYGAM 298 Query: 613 FIDPPTFSNSKRMEDAFDVQRDHLALMKD 641 ++PP ED + R+ K Sbjct: 299 IVNPPYGERLMGDEDIEKLYRNFGDFCKK 327 >UniRef50_C0YIG9 Probable methylase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YIG9_9FLAO Length = 388 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 116/388 (29%), Positives = 191/388 (49%), Gaps = 9/388 (2%) Query: 6 ASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECK 65 T GLE++L E++ LG ++ V+ +GD +Y+ +R A +I++P+ E K Sbjct: 10 IKTFFGLEQILAEEIKKLGGRNVEIKNRAVNCEGDLGFLYKINYSARTALKILVPIHEFK 69 Query: 66 VYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNL 125 ++ Y + W + +F++ + ++T ++SQ+ +K+KDAIVD F K Sbjct: 70 AFNQHQFYDRLFKFEWDNFMDVDQSFSIDATVNSETFKHSQFVTLKMKDAIVDYFQEKFK 129 Query: 126 PRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRS 185 RPNV+ PDI+ ++ + +E I++D SGD L RGYR G API E LA+ ++ + Sbjct: 130 RRPNVETRNPDIKFHLHIDRELVMISMDSSGDPLFKRGYRREQGEAPINEVLASGMLQLA 189 Query: 186 GWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQT 245 GW LDPMCGSGTLLIEAAM+A D + R R+GF W +D ++ ++K Sbjct: 190 GWDGKGNFLDPMCGSGTLLIEAAMIAMDLPAQIFRKRFGFQNWNNYDADLFAKIKEFRIN 249 Query: 246 RARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGT 305 R ++ + G D DAR++ AR N A + ++I + ++ L Sbjct: 250 RVKQ----FDGKIVGYDIDARMLNAARMNVEAAEMEDVIEIKKQNFFDSKKELF---PLL 302 Query: 306 VLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKA 365 ++ NPPY ER+ + +G K + L S+ + + + LR ++ K Sbjct: 303 MVFNPPYDERISINDD--DFYKKIGDTFKTNYPNTLAWLISSDLEAVKKIGLRPSRKIKL 360 Query: 366 KNGPLDCVQKNYHVAESTPDSKPAMVAE 393 NG L+ Y + E T Sbjct: 361 FNGKLETRFLQYEMYEGTKKIHKLEGNN 388 >UniRef50_B4RPC6 Tou5 n=34 Tax=Proteobacteria RepID=B4RPC6_NEIG2 Length = 380 Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 132/385 (34%), Positives = 208/385 (54%), Gaps = 8/385 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + +LFA+ RGLE +L ELE+LG E + GGV +G Y + + SR A RI+L Sbjct: 4 LYTLFATCPRGLETVLSQELESLGCTEVRAFDGGVSCRGGLEQAYAANLHSRTAGRILLR 63 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L + ++ D+Y + INW F TF V +++ Q+ + VKDA+ DAF Sbjct: 64 LTKGTYRTERDIYKLAKNINWFNWFTLQQTFKVKIEAKRANVKSLQFAGLTVKDAVCDAF 123 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RP+VD+ APD+R++ +L + I +D SG+ L RGYR G AP++E LAA Sbjct: 124 RDIYDARPSVDKAAPDVRIHAFLDERNVEIFIDTSGEALFKRGYRLDTGEAPLRENLAAG 183 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +++ +G+ P DP CGSGT+ IEAA +A RAPG+ R R+GF D+ +W +++ Sbjct: 184 LLLSAGYDGTQPFQDPFCGSGTIAIEAAWIAAGRAPGMMR-RFGFEKLQNFDKTLWADLR 242 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 A+ + R + GSD+ R++Q A NA AG ++++F V D + Sbjct: 243 RRAEAQTRP----VRAPIAGSDNGRRIVQTALDNAHNAGADDIVSFSVADAQSVRP---N 295 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G G ++SNPPYG RL+ AL AL+ LG +K + GW + +F+ ++ ++L Sbjct: 296 GENGIMVSNPPYGVRLEEVRALQALYPQLGTWLKKHYAGWRVGMFTGDREMPKFMRLLPK 355 Query: 361 KQYKAKNGPLDCVQKNYHVAESTPD 385 ++ NG +DC + + + Sbjct: 356 RKIPLYNGNIDCRLFLIDMVQGSNR 380 >UniRef50_Q898M5 Methyltransferase n=2 Tax=Bacteria RepID=Q898M5_CLOTE Length = 380 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 120/385 (31%), Positives = 195/385 (50%), Gaps = 10/385 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 +L A+ GLE+++ EL LG + + G V F+G + MW R A R+++ + Sbjct: 3 YTLIATATFGLEKVVADELRELGYEDLIIENGKVTFQGSEMDIVTCNMWLRTADRVLIKM 62 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 E K S +L+ G + W ++ V + + + K A+V++ Sbjct: 63 AEFKAESFEELFQGTLKVEWGDIIPETGFMHVTGKSVKSKLFSVPDCQSITKKAVVESMK 122 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 RK + D ++ V + K+ ++ LD +G GLH RGYR+ AG AP+KETLAAA+ Sbjct: 123 RKYN-KEMFSEDGATYKIEVAILKDIVTLTLDTTGPGLHKRGYREFAGEAPLKETLAAAL 181 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 V+ S W+P L DP CGSGT+ IEAAM+ + APGL+R + W + +WQ+++ Sbjct: 182 VLLSKWEPSRILADPFCGSGTIPIEAAMIGKNIAPGLNRN-FVSEDWDIIPKNLWQDMRK 240 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 A R + + SD + RV++ AR NA AG+ + I F+ D+ + N K Sbjct: 241 YA----RNSINDKEFRILASDINGRVLKTARDNAEKAGVADYIAFQRMDMKEFRN---KK 293 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 YG +++NPPYGER+ + + L+ +GR + W+ + ++ D +C ++DK Sbjct: 294 RYGFIITNPPYGERIGNAKEVENLYEDMGRTF-QELKDWSYFVITSYEDFENCFGEKSDK 352 Query: 362 QYKAKNGPLDCVQKNYHVAESTPDS 386 K NG + C Y AE + Sbjct: 353 NRKLYNGRIKCYYYQYFGAEPEKNP 377 Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 19/152 (12%), Positives = 43/152 (28%), Gaps = 41/152 (26%) Query: 532 MLGQMSKGKDFLNLFSYTGSATVHAGLGG------------------------------A 561 +L + + + F +G+ + A + G A Sbjct: 183 LLSKWEPSRILADPFCGSGTIPIEAAMIGKNIAPGLNRNFVSEDWDIIPKNLWQDMRKYA 242 Query: 562 R--------STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIF 613 R D++ L+ A N G+ + D + +++ I Sbjct: 243 RNSINDKEFRILASDINGRVLKTARDNAEKAGVAD-YIAFQRMDMKEF--RNKKRYGFII 299 Query: 614 IDPPTFSNSKRMEDAFDVQRDHLALMKDLKRL 645 +PP ++ ++ D ++LK Sbjct: 300 TNPPYGERIGNAKEVENLYEDMGRTFQELKDW 331 >UniRef50_Q0K713 Predicted N6-adenine-specific DNA methylase n=11 Tax=Burkholderiaceae RepID=Q0K713_RALEH Length = 417 Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 124/415 (29%), Positives = 187/415 (45%), Gaps = 34/415 (8%) Query: 4 LFASTARGLEELLKTELENLGA----------VECQVVQGGVHFKGDTRLVYQSLMWSRL 53 FA RGLE L EL + A Q V GGV+F G+ Y + SR+ Sbjct: 5 FFAPCPRGLESALAEELREIAAMPGMAALAPFTVHQEVPGGVNFSGEMAAAYAVNLHSRI 64 Query: 54 ASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVK 113 ASR+++ + + D+Y + + W + F+P + V + +R+ + A++VK Sbjct: 65 ASRVLMRVAARGYRHEDDIYTLARGVRWEQWFSPDESLRVDITSHKSPLRSLNFTALRVK 124 Query: 114 DAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPI 173 D + DA + RP+VD +PD+R+ L + ++ LD +G+ L RG+R G AP+ Sbjct: 125 DGVCDALRERVGVRPSVDTASPDVRIYAHLTERDCTLYLDTTGEPLFKRGWRTEKGEAPL 184 Query: 174 KETLAAAIVMRSGWQPGT---PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQ 230 KE LAA I+ +GW PG P DPMCGSGT LIEAA +A APG R + F Sbjct: 185 KENLAAGILRLAGWVPGQTFRPFYDPMCGSGTFLIEAAQVALGIAPGGSRS-FAFEWLKG 243 Query: 231 HDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKD 290 D WQ++K++AQ RAR + GSD ++ R N AG+ + D Sbjct: 244 MDTKAWQKLKSDAQ-RARMLASADELQVVGSDISTDMLAITRANWERAGLPGEARTKQVD 302 Query: 291 VAQLTNPLPKGPYGTVLSNPPYGERLD-----------------SEPALIALHSLLGRIM 333 + P G +L NPPYGER+ E A S + Sbjct: 303 ARFVQPPFD--EPGLLLMNPPYGERIAVRGQRRLPEEAMPRDEVEEAAANQFASAFATTL 360 Query: 334 KNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKP 388 K F GW +F+ L+L+ ++ NG ++C + + + Sbjct: 361 KQHFAGWQAWVFTGDMGFPRRLRLKESRRTPLYNGNIECRLFRFDMVRGANRAPQ 415 >UniRef50_A9KSV9 Putative RNA methylase n=26 Tax=Bacteria RepID=A9KSV9_CLOPH Length = 380 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 114/386 (29%), Positives = 181/386 (46%), Gaps = 11/386 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 A GLE +LK E+ +LG V G V F GD + ++ M+ R RI++ + Sbjct: 4 YEYIAPCHFGLEAVLKREITDLGYEIVSVEDGRVIFAGDETAICRANMFLRTTERILIKV 63 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAV-HFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + K + +L+ + + W + F V + + + + +K A+V+ Sbjct: 64 AKFKAETFEELFQNTKEVPWEQYIPKDGKFWVAKATSIKSKLFSPTDIQSIMKKAMVERL 123 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + + V V K+ +I +D SG LH RGYR API ETLAAA Sbjct: 124 KGVY-KVEWFEESGNEYPVRVTFMKDEITIGIDTSGVSLHKRGYRKLISKAPITETLAAA 182 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQ-HDEAIWQEV 239 ++M + W L+DP CGSGT IEAAM+ APGL+R + W + W E Sbjct: 183 LIMLTPWNKDCVLIDPFCGSGTFPIEAAMIGARIAPGLNRS-FLAENWTDLIPKKAWYEA 241 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 EA L + + G D D VI+ A+ NA +AG+ + I F+ + V++L++P Sbjct: 242 AEEANGMI---LHDIEMNIQGYDIDGEVIKAAKQNAEVAGVDQYIHFQKRSVSELSSP-- 296 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 YG +++NPPYGERL+ + A+ ++ +G+ MK W+ L ++ D + +A Sbjct: 297 -KKYGFIITNPPYGERLEDKSAMPPIYHEIGQAMKR-LDTWSSYLITSYEDAEKHIGRQA 354 Query: 360 DKQYKAKNGPLDCVQKNYHVAESTPD 385 D+ K NG L Y + Sbjct: 355 DRNRKIYNGMLKTYFYQYMGPKPPKR 380 >UniRef50_B0TF24 Thump domain protein n=33 Tax=Firmicutes RepID=B0TF24_HELMI Length = 388 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 119/385 (30%), Positives = 193/385 (50%), Gaps = 9/385 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 L A+ A GLE ++ EL LG + V G V F+GD R + ++ +W R A R+++ +G Sbjct: 5 ELIATAAFGLEAVVARELRELGYDDQSVEDGRVIFRGDERAICRANLWLRSAERVLVKVG 64 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + +L+ G +A+ W + A F V + + + K AIV+ Sbjct: 65 SFPATTFEELFQGTKALPWPDWLPEKAEFPVEGKSVRSKLFSVSDCQAIAKKAIVEKMKE 124 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + R D P + V L K+ A++ +D SG GLH RGYRD G AP+KETLAAA++ Sbjct: 125 RY-RRSWFDEKGPRYTIEVSLLKDVATLTIDTSGAGLHKRGYRDLVGQAPLKETLAAAMI 183 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 S W+ LLDP CG+GT+ IEAAM+ + APG +R + W Q ++WQ+V+ E Sbjct: 184 QLSFWRHDRVLLDPFCGTGTIPIEAAMIGRNLAPGRNR-TFAAEQWGQIPASLWQQVREE 242 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 A + A + G+D D + AR +AR AG+ I + + +++ + Sbjct: 243 AHSLA---ALDRELRITGTDIDEAALSLARRHARKAGVDNAIHLQRQPMSESRSRF---K 296 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 YG ++ NPPYGERL + L+ +G++ W+ + ++ P + +ADK+ Sbjct: 297 YGHLICNPPYGERLGERQEVERLYREMGKVFSA-LDTWSFYVLTSHPGFEALFGRKADKK 355 Query: 363 YKAKNGPLDCVQKNYHVAESTPDSK 387 K NG + C ++ + + Sbjct: 356 RKLYNGRIQCNYYQFYGPKPPRREE 380 >UniRef50_D1RAW3 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RAW3_9CHLA Length = 383 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 127/380 (33%), Positives = 192/380 (50%), Gaps = 8/380 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFK-GDTRLVYQSLMWSRLASRIMLPL 61 LF + ++GLE LL EL+ L GV K D +Y+ SR+ASR++ PL Sbjct: 10 ELFVTCSQGLEPLLIEELQELSFENAHPGFRGVFVKIKDLSDIYRINYNSRIASRVLFPL 69 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 Y LY G NW F G TFA+ + + IRNS + A VKDAI D Sbjct: 70 TTFNCYDQKALYRGASQFNWIPFFRKGMTFAIDSNVNHRLIRNSLFAAQVVKDAICDQLR 129 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 K RPN+D PDI++N+++ TA ++LD SG LH RGYR + AP++E LAAAI Sbjct: 130 EKFGERPNIDVKNPDIQLNLFIQGNTAILSLDTSGAPLHKRGYRLDSVEAPMQENLAAAI 189 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + + ++ + DP CGSGTLLIEAA++A+ PG R WGF + + + W +VK Sbjct: 190 LRLANYKKEEIMCDPCCGSGTLLIEAALMASQTPPGFLRKDWGFMRFPEFSASDWLKVKM 249 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 EA + + H +G + + ++ ++TN R AG I D + T Sbjct: 250 EADQKRQPI---PKGHLFGVEINKNAVRVSKTNIRAAGFLSEIEVVQGDFREWTP---SV 303 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGG-WNLSLFSASPDLLSCLQLRAD 360 +++NPP+G+RLD L L+ +G MK + +F+ + DL + L A Sbjct: 304 LPTLLVTNPPHGKRLDFAEDLRPLYRSIGDFMKQKMAKPARGFVFTGNLDLTKEVGLAAK 363 Query: 361 KQYKAKNGPLDCVQKNYHVA 380 +++ +G ++ + V Sbjct: 364 RRHVLHSGGVESRLLEFDVY 383 >UniRef50_C3WCN4 Methyltransferase n=6 Tax=Fusobacterium RepID=C3WCN4_FUSMR Length = 384 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 120/386 (31%), Positives = 189/386 (48%), Gaps = 10/386 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +L AST G+E +++ E LG + G V F+G R + ++ + R A R+ + +G Sbjct: 6 TLIASTTMGVESVVRDECVALGFENVKAFNGRVEFEGTLRDIAKANIHLRCADRVFIKMG 65 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVH-FSGLNDTIRNSQYGAMKVKDAIVDAFT 121 E K + +L+ V+ + W ++ F V S + + + K AIV+ Sbjct: 66 EFKALTFDELFNNVKRLPWGDIIEENGEFPVSWVSSVKSKLFSKSDIQKITKKAIVEKMK 125 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 K + D + + H + + +D SG+ LH RGYR APIKET+AAA+ Sbjct: 126 EKYG-KSYFYEDGAKFAIKIQAHNDVFLVMIDTSGEPLHKRGYRAIKNEAPIKETMAAAL 184 Query: 182 VMRSGWQPGT-PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 V+ S W+ G PL+DPMCG+GTLLIEAAM+A + APG +R + W E W +V+ Sbjct: 185 VLLSRWKGGDLPLVDPMCGTGTLLIEAAMIARNIAPGANRN-FVSEDWKLIPENDWIDVR 243 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 EA + E YGSD DA ++ AR N AG+ + I E ++ + Sbjct: 244 DEAFSMED---YEKEVKIYGSDIDADTVEIARKNIAKAGVEDDIHLECQNFLDMER---D 297 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 YG +++NPPYG+RL E A+ L+ LLG I + + W+ + ++ +A Sbjct: 298 EKYGALITNPPYGDRLLDEEAVERLYGLLGDICRMRIPKWSYYIITSHKGFEKAFGKKAT 357 Query: 361 KQYKAKNGPLDCVQKNYHVAESTPDS 386 K K NG ++C Y+ + Sbjct: 358 KNRKLYNGGIECHYYQYYGEKDGKKR 383 >UniRef50_C6X0X4 Methyltransferase n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X0X4_FLAB3 Length = 389 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 114/388 (29%), Positives = 194/388 (50%), Gaps = 9/388 (2%) Query: 6 ASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECK 65 T GLEE+L E+ LG ++ V+ +GD +Y+ +R A +I++P+ K Sbjct: 10 IKTFFGLEEILAEEIRKLGGANVEIKNRAVNCEGDLGFLYKINYSARTALKILIPVLTFK 69 Query: 66 VYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNL 125 + + Y + W + + TFA+ + ++ ++SQ+ + K+KDAIVD F K+ Sbjct: 70 AWDESRFYDKLFDFPWDDYMSVDQTFAIDATVYSERFKHSQFMSQKMKDAIVDYFKFKHR 129 Query: 126 PRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRS 185 RP+V+ PDI+ ++ + +E +I++D +GD L RGYR G API E LA+ ++ + Sbjct: 130 KRPDVNTIDPDIKFHLHIDRELVTISMDSAGDALFKRGYRKEQGEAPINEVLASGMLQLA 189 Query: 186 GWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQT 245 GW LDPMCGSGTLLIEAAM+A D + R ++ F W +DE ++Q++K Sbjct: 190 GWDGKGNFLDPMCGSGTLLIEAAMIAMDLPAQIFRKKFAFQNWKNYDEELFQKIKEVRIN 249 Query: 246 RARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGT 305 R + E++ G D D++++ N A + ++I + +D + L Sbjct: 250 RVK----EFTGKIVGYDVDSQMLNAVHLNIEAAEMEDVIEVKNQDFFESKKELF---PLL 302 Query: 306 VLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKA 365 ++ NPPY ER++ E + +G K + S+ D + LR ++ K Sbjct: 303 MVFNPPYDERIEIEDD--EFYKKIGDTFKKNYPNTLAWFISSDLDAAKKVGLRPSRRIKL 360 Query: 366 KNGPLDCVQKNYHVAESTPDSKPAMVAE 393 NG L+C + + E T + Sbjct: 361 YNGKLECRFLQFEMYEGTKKTHKLTNEP 388 >UniRef50_A6NQS7 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NQS7_9BACE Length = 399 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 122/376 (32%), Positives = 181/376 (48%), Gaps = 9/376 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 F T GLE L EL L + + G V G + + + R R++L LG Sbjct: 31 QFFVPTLFGLEGLAADELRRLNLADVRAENGHVLCTGRPGDIPRLNLNLRTGERVLLVLG 90 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 L+ GV+AI W E A F V LN + + VK A+ R Sbjct: 91 SFHTPDFDALFEGVKAIPWEEYLPRTAAFPVKGHSLNSALHSVPACQSIVKKAVAARLGR 150 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + + P ++ + ++TA I LD SG GLH RGYR +AP++ETLAAA+V Sbjct: 151 AYG-LETLPENGPLFQIQFSIMRDTAMIMLDTSGAGLHKRGYRAVGVVAPLRETLAAAMV 209 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 M S ++ P DP CGSGT+ IEAA++A +RAPGL R + W W + +E Sbjct: 210 MLSQYRGKDPFCDPFCGSGTIAIEAALIARNRAPGLDRS-FSAQKWPWLSSQAWMDAASE 268 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 A + G + +G D D + ++ AR+NA AG+ +++ FEV D + P Sbjct: 269 AMDKEFDGQYD----IWGGDIDPKAVEIARSNAEKAGVDDVVRFEVADATRFHR---SEP 321 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 YG V++NPPYGER+ + L++ G+ ++ GW +S+ S+ + ADK+ Sbjct: 322 YGRVVTNPPYGERIMEKKEAEGLYASFGQAVRGLPAGWRVSVLSSHTEFERTFGRTADKK 381 Query: 363 YKAKNGPLDCVQKNYH 378 K NG + C YH Sbjct: 382 RKLYNGMIKCDLFQYH 397 Score = 51.1 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 50/182 (27%), Gaps = 45/182 (24%) Query: 532 MLGQMSKGKDFLNLFSYTGSATVHAGL--------------------------------- 558 ML Q F + F +G+ + A L Sbjct: 210 MLSQYRGKDPFCDPFCGSGTIAIEAALIARNRAPGLDRSFSAQKWPWLSSQAWMDAASEA 269 Query: 559 -----GGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIF 613 G D+ +E A N G+ R AD + +E + + Sbjct: 270 MDKEFDGQYDIWGGDIDPKAVEIARSNAEKAGVDD-VVRFEVADATRF--HRSEPYGRVV 326 Query: 614 IDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGL 673 +PP +R+ + + + + + R L AG + ++ F A Sbjct: 327 TNPPY---GERIMEKKEAEGLYAS-FGQAVRGLPAGWRVSVLSSHTEFERTFGRTADKKR 382 Query: 674 KA 675 K Sbjct: 383 KL 384 >UniRef50_B2V4U2 Methyltransferase n=7 Tax=Clostridium RepID=B2V4U2_CLOBA Length = 386 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 113/396 (28%), Positives = 197/396 (49%), Gaps = 10/396 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M +L A++ G+E + EL LG + ++ G V F+GD + + + R A R+++ Sbjct: 1 MYNLIATSTFGIESITAKELRALGYEDLEIENGKVTFEGDEMDIAIANVHLRTADRVLIK 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + E + S +L+ G +++ W E+ V + T+ + VK A++D+ Sbjct: 61 MAEFEATSFEELFQGTKSVKWHEIIPKDGIMHVVGKSVKSTLHSVPDCQSIVKKAVIDSM 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + ++ V + K+ ++ +D +G GLH RGYR+ AGIAP+KETLAA+ Sbjct: 121 SEHYGI-NQFSESGSTYKIEVAILKDKVTLTIDTTGPGLHKRGYRELAGIAPLKETLAAS 179 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +++ S W L+DP CGSGT+LIEAAM+A + APG +R + W+ + VK Sbjct: 180 MLLLSRWNDNFELVDPFCGSGTILIEAAMIALNIAPGCNRN-FVAEEWSDEIRNTFAMVK 238 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 A +K + + + G D D RV++ A NA AG+ + I F+ +D ++ Sbjct: 239 DGA----KKAVKDKEINLIGYDIDYRVLKVAMDNAEKAGVSKYIKFQKRDFMDFSS---S 291 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 +G ++SNPPYGER+ L L+ +G+ MK + W+ ++ ++ L +++ Sbjct: 292 KKHGFMISNPPYGERIGERETLEPLYKYMGQ-MKKKLSEWDFNILTSIEGFEKLLGVKST 350 Query: 361 KQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYT 396 K K NG + C Y + ++ E Sbjct: 351 KNRKLYNGTIRCYYYQYFDNIKIKNPGDTLINELMD 386 >UniRef50_B2RJX4 Putative N6-adenine-specific DNA methylase n=2 Tax=Porphyromonas gingivalis RepID=B2RJX4_PORG3 Length = 484 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 133/427 (31%), Positives = 216/427 (50%), Gaps = 20/427 (4%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 + A T GLE++L TEL L A E V + V F+GD R++Y + + R A RI+ P+ Sbjct: 9 MVAKTLYGLEDVLATELTALEAEEVTVGRRMVSFRGDKRMLYLANLRLRTALRILKPVIT 68 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 + ++Y ++ +WT + + TF++ +D+ +NSQY + + KDA+VD F + Sbjct: 69 FHAKTTDEIYERLRLFDWTTVISSDQTFSIDSVVYSDSFKNSQYISYRTKDALVDFFRDR 128 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 RP+V PDI +N+ + E +++LD SG+ LH RGYR AP+ E LAA I++ Sbjct: 129 EGKRPSVRLSNPDILLNIHVSHEEVTLSLDSSGESLHKRGYRVAETTAPLNEVLAAGILL 188 Query: 184 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEA 243 ++GW T L+DPMCGSGT LIEAA++A + APG++R + F WA D ++ E+ + Sbjct: 189 KAGWDGNTDLIDPMCGSGTFLIEAALIACNIAPGIYRRGFAFQRWADFDPDLYDELFHD- 247 Query: 244 QTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPY 303 + YGSD + + AR+N AG+G I+ V + Q P Sbjct: 248 ----DSAERVFDHIIYGSDILPQAVAAARSNVERAGLGRYISLSVLPMQQRPKP---ESK 300 Query: 304 GTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQY 363 ++ NPPYGER+ + L++++G +K+ + G + + + P+ + + LR + Sbjct: 301 AMLVMNPPYGERI-KVEDMQQLYTMIGERLKHNYAGCSAWILAFKPEHFNHIGLRQSHRE 359 Query: 364 KAKNGPLDCVQKNYHVAESTPDSKPAMV-----------AEDYTNRLRKNLKKFEKWARQ 412 K NG L+C + Y + E DS + +K + Sbjct: 360 KLMNGALECELRGYELFEGRRDSFAERKSRRAEGEQGVGRRIDRRDVSAGREKRSNSMDR 419 Query: 413 EGIECYR 419 E YR Sbjct: 420 ENKPPYR 426 >UniRef50_Q3SES4 N6-adenine-specific DNA methylase n=2 Tax=Betaproteobacteria RepID=Q3SES4_THIDA Length = 398 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 136/391 (34%), Positives = 205/391 (52%), Gaps = 7/391 (1%) Query: 5 FASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGEC 64 FA+ RGLEELL EL GA + + GV F D ++ + SR A+RI+ +G Sbjct: 15 FATCPRGLEELLVAELNAAGAQVVRQLPAGVLFIADAAAEMRANLTSRTATRILRKVGYT 74 Query: 65 KVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKN 124 + + +Y + W E F+ T AV N +++ + +K+KDAI D F + Sbjct: 75 RYKKEEHIYRAALDLPWPEWFDVTKTIAVKVGAQNAPLKSLNFITLKIKDAICDRFREET 134 Query: 125 LPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMR 184 RP+VD ++PD+ V + + + LD SG+ L RG++ A A IKE LAA +++ Sbjct: 135 RERPSVDTESPDVPVYAFFTPDAVTFYLDTSGEPLFKRGFKREASAASIKENLAAGLLLL 194 Query: 185 SGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQ 244 SGW+PGTPLLDPMCG+GT+L+EAA LA +RAPG R + F + D A+WQ +K E + Sbjct: 195 SGWEPGTPLLDPMCGAGTILLEAADLALNRAPGRARH-FAFEHYRDFDAALWQRIKDETK 253 Query: 245 TRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYG 304 + +G+D D V+ +AR N +AG + I +V D+ L P P G Sbjct: 254 ALEKPL---TKLPIFGADQDRWVLDKARNNLAVAGYADAIELKVSDLLDLKPPTP---VG 307 Query: 305 TVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYK 364 T+++NPPYGER+ L + LLG +K F GW+ + S P L + L+A ++ Sbjct: 308 TIVTNPPYGERIGEAEDLAEWYPLLGDWLKQNFAGWDAWIISGDPLLPKAIGLKASRRIP 367 Query: 365 AKNGPLDCVQKNYHVAESTPDSKPAMVAEDY 395 NG ++ Y + + K A Sbjct: 368 LFNGQIETRFLQYKLIAGSMKVKKPEAASGP 398 >UniRef50_Q1DCA8 THUMP domain/methyltransferase domain protein n=2 Tax=Cystobacterineae RepID=Q1DCA8_MYXXD Length = 433 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 136/380 (35%), Positives = 196/380 (51%), Gaps = 8/380 (2%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 LFA+ ARG E+LL EL+ LGA + +GGV F +WSR+A R++ PLG Sbjct: 22 LFATAARGTEDLLADELKELGARRIRQDRGGVRFMATLDEALMVALWSRIAMRVLYPLGA 81 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 + LY +I W E P TFAV + + +S + A+KVKDAIVD Sbjct: 82 FEARGAEGLYEAAASIPWEEHLTPEHTFAVDATLKDSEHSHSGFVALKVKDAIVDRMRDT 141 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 RP+V+ PDIRV L +ET S++LDL G+ LH RGYR R AP+KETLAAA++ Sbjct: 142 KGARPDVNTRDPDIRVVAHLARETLSLSLDLCGEPLHRRGYRVRPTPAPLKETLAAAVLR 201 Query: 184 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEA 243 + + L+DPMCGSGTLLIEA ++A RAPGL+R + W + +E+ A+ Sbjct: 202 AANYTGTEGLVDPMCGSGTLLIEAGLIARRRAPGLNRD-FAVERWPELGTRA-RELLADM 259 Query: 244 QTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPY 303 + AR+ + G D D ++ A N R A + E I D +L P Sbjct: 260 RADARRNERKVEVPLLGFDKDPEALEAASRNVRAARLTEEIQLAEGDATRL--PPLPETG 317 Query: 304 GTVLSNPPYGERLDS--EPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 G +++NPPYG+RL + + + + + LG ++ GW + + +P S R Sbjct: 318 GLIVTNPPYGDRLGTGGQKGMKSFYFKLGESLR--VPGWRVWVICGNPAFESAFHARPSA 375 Query: 362 QYKAKNGPLDCVQKNYHVAE 381 + NGP+ C Y + Sbjct: 376 KRDLWNGPIACSLLGYRPPD 395 >UniRef50_C5WIH5 Methyltransferase n=45 Tax=Firmicutes RepID=C5WIH5_STRDG Length = 384 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 119/387 (30%), Positives = 192/387 (49%), Gaps = 12/387 (3%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 L A+ A GLE ++ E+ LG +CQV G V+F+GD + ++ +W R A R+ + + Sbjct: 5 FKLVATAAAGLEAVVGKEVRALGF-DCQVENGKVYFEGDLEAIAKTNLWLRAADRVKIIV 63 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAV-HFSGLNDTIRNSQYGAMKVKDAIVDAF 120 G+ + +L+ GV A++W GA F + + + N K A+V Sbjct: 64 GQFPARTFEELFQGVFALDWENYIPLGAKFPISKAKCVKSKLHNEPSVQAITKKAVVKKL 123 Query: 121 TRKNLPRPNVDRD--APDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLA 178 + V + + V + K+ A++ +D +G L RGYR + G APIKE +A Sbjct: 124 QKYFHRPEGVPLQEVGSTVNIEVSILKDQATVMIDTTGSSLFKRGYRVQKGGAPIKENMA 183 Query: 179 AAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 AAI+ S W P PL+DP CGSGT IEAA++ + APG +R + F W+ D+ I Q+ Sbjct: 184 AAILALSNWFPDKPLVDPTCGSGTFCIEAALIGMNIAPGFNRS-FAFEEWSWVDKEIIQK 242 Query: 239 VKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 V+ EA+ AR + G D D+R+I+ A++NA AG+ ++ITF+ + Sbjct: 243 VRDEAEQEAR---YDAELDISGFDIDSRMIEIAKSNAEEAGLSDVITFKQMRLQDFRTDK 299 Query: 299 PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 G ++SNPPYGERL + A+ L++ +G+ W+ + ++ Sbjct: 300 VN---GVIISNPPYGERLLDDKAVDILYNEMGQTF-APLKTWSKFILTSDEQFEKKYGQT 355 Query: 359 ADKQYKAKNGPLDCVQKNYHVAESTPD 385 ADK+ K NG L ++ Sbjct: 356 ADKKRKLYNGTLRVDLYQFYGERVKRH 382 >UniRef50_B1CAN9 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CAN9_9FIRM Length = 375 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 122/381 (32%), Positives = 196/381 (51%), Gaps = 11/381 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 ++ A+ GLE++LK E+ +LG +V G V+FKG+ + V + + R A R+++ + Sbjct: 5 TIVATCTFGLEKVLKREVTDLGYEIDKVEDGKVYFKGNKKDVMNANLHLRTAGRVLIFIT 64 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATF-AVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 YS DL+ V++ W ++F A F A S + + + + VK AIV+ Sbjct: 65 TFDAYSFDDLFDNVESYPWEDIFEKNAGFNATKISSVKSKLFSKRDIQKIVKKAIVERLK 124 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 RK + + V + K+ SI ++ SG GLH RGYR+ A AP+KETLA+ I Sbjct: 125 RKY-KLNKLSESGSYYELIVNIKKDKVSIFINTSGKGLHKRGYRENALKAPLKETLASGI 183 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 ++ SG++ P D MCGSGT++IEAAM A + APGL+RG + F W ++ ++ +K Sbjct: 184 ILLSGYRGDRPFSDVMCGSGTIVIEAAMKAKNIAPGLNRG-FAFEKWKEYSSKDFELLKE 242 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 EA+ + G+D D R I+ A NAR AG+ + + F+ D+ + + + Sbjct: 243 EARAEIKPA----EVRLLGNDIDYRAIKLANENARKAGVEDAVAFQKMDMKEFRS---RK 295 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 G ++ NPPY ER+ +E +I L+ G+ M W L + A P +AD+ Sbjct: 296 KNGLMIVNPPYAERIGNEAEVIQLYKDFGK-MYENLEDWKLFVLCAHPMFQKYFGEKADR 354 Query: 362 QYKAKNGPLDCVQKNYHVAES 382 K NG + C Y+ Sbjct: 355 NRKLFNGNMLCYLYQYYPKRK 375 Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 36/108 (33%), Gaps = 8/108 (7%) Query: 568 DMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMED 627 D+ ++ A N R G+ A + D + + ++ L+ ++PP + Sbjct: 259 DIDYRAIKLANENARKAGVED-AVAFQKMDMKEF--RSRKKNGLMIVNPPYAERIGNEAE 315 Query: 628 AFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKA 675 + +D + ++L+ + F+ A K Sbjct: 316 VIQLYKDFGKMYENLEDW-----KLFVLCAHPMFQKYFGEKADRNRKL 358 >UniRef50_C0QBT1 Putative RNA methylase family protein n=2 Tax=Deltaproteobacteria RepID=C0QBT1_DESAH Length = 403 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 124/378 (32%), Positives = 182/378 (48%), Gaps = 7/378 (1%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 + F A L + EL+ LGA + G++FK + Y+ +RL SRI+ PL Sbjct: 33 TFFGQIAEDLINEGEAELKQLGATDVTPSFRGIYFKAEKETFYRINYQTRLFSRILAPLT 92 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + LY + I W +F +TFA+ + + I +SQY +++KDAI D F Sbjct: 93 SFACNNTDTLYKQAKKIKWENLFKKKSTFAITSNVSDSEITHSQYAGLRLKDAIADYFRE 152 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + RP+V+ PD+ +N+ + KETA I++D SG LH RGYR+ + AP++ET+AAAI+ Sbjct: 153 RTGKRPDVNTLDPDVMINLHIRKETADISIDASGGALHKRGYREESVTAPMQETIAAAII 212 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 SGW PL DPMCGSGTLL EA M G+ R R+GF + +W +VK E Sbjct: 213 RISGWDGTRPLYDPMCGSGTLLCEALMHQCHIPAGIFRQRFGFEILPDFNPDLWNQVKTE 272 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 A GSD + ARTN G ++ D Q+ Sbjct: 273 ANAGIIPI---AQGLIAGSDIAESSVTAARTNLMGLHNGGQVSVLNMDFRQIQALEDT-- 327 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 +++NPPYG R+ E L H LG +K + G ++ P + + L+A + Sbjct: 328 --IIVANPPYGIRMGKESDLKVFHRELGDFLKQRCKGSTAYIYFGDPQYVGHMGLKATWK 385 Query: 363 YKAKNGPLDCVQKNYHVA 380 K G LD Y + Sbjct: 386 RPLKAGGLDGRLVKYEMY 403 >UniRef50_C1CIN4 Methyltransferase n=129 Tax=Bacilli RepID=C1CIN4_STRZP Length = 385 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 127/388 (32%), Positives = 192/388 (49%), Gaps = 12/388 (3%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 +L A+ A GLE ++ E+ LG +CQV G V F+GD R + ++ +W R A RI + + Sbjct: 5 FNLIATVAAGLEAVVGREVRELGY-DCQVENGRVRFQGDVRAIIETNLWLRAADRIKIIV 63 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAV-HFSGLNDTIRNSQYGAMKVKDAIVDAF 120 G + +L+ GV A++W GA F + + + N K A+V Sbjct: 64 GTFPAKTFEELFQGVFALDWENYLPLGARFPISKAKCVKSKLHNEPSVQAISKKAVVKKL 123 Query: 121 TRKNLPRPNVD--RDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLA 178 + V + P+ ++ V + K+ A++ +D +G L RGYR G APIKE +A Sbjct: 124 QKHYARPEGVPLMENGPEFKIEVSILKDVATVMIDTTGSSLFKRGYRTEKGGAPIKENMA 183 Query: 179 AAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 AAI+ S W P PL+DP CGSGT IEA M+A APGL R + F W + + QE Sbjct: 184 AAILQLSNWYPDKPLIDPTCGSGTFCIEAVMIARKMAPGL-RRSFAFEEWNWISDRLIQE 242 Query: 239 VKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 V+ EA A+K E G D DAR+++ A+ NA+ AG+ ITF+ V L + Sbjct: 243 VRTEA---AKKVERELELDIMGCDIDARMVEIAKANAQAAGVAGDITFKQMRVQDLRSDK 299 Query: 299 PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 G ++SNPPYGERL + + L++ +G++ W+ + ++ S + Sbjct: 300 IN---GVIISNPPYGERLSDDAGVTKLYAEMGQVF-APLKTWSKFILTSDEAFESKYGSQ 355 Query: 359 ADKQYKAKNGPLDCVQKNYHVAESTPDS 386 ADK+ K NG L Y Sbjct: 356 ADKKRKLYNGTLKVDLYQYFGQRVKRQE 383 >UniRef50_C3JC56 RNA methylase family protein n=2 Tax=Bacteria RepID=C3JC56_9PORP Length = 493 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 136/410 (33%), Positives = 208/410 (50%), Gaps = 11/410 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 ++S A T GLE++L ELE LGA + +V + V F+GD R++Y + R A RI+ P Sbjct: 22 LSSYVAKTLYGLEDVLADELEALGAYDIEVGRRMVRFRGDKRMLYLTNYRLRTALRILKP 81 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + E S DLY ++ W + TF + +D NS+Y + +VKDAI D F Sbjct: 82 IYEFNCESIEDLYETLRQFEWAQYIRCDQTFLIDPVVYSDRFSNSRYVSYRVKDAIADYF 141 Query: 121 TRKN--LPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLA 178 RP+V D PD+R N+ + + +++LD SGD LH RGY+ + AP+ E LA Sbjct: 142 VANTPDGKRPSVRMDTPDVRFNIHIAQRHVTLSLDSSGDSLHKRGYKVKQTPAPLSEVLA 201 Query: 179 AAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 A I++++GWQ L+DPMCGSGT IEAA++A A G R ++ F WA D +W+E Sbjct: 202 AGILLKAGWQGQCDLIDPMCGSGTFAIEAALIARGVAAGAWRTKYAFEEWADFDADLWRE 261 Query: 239 VKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 V+ + + H Y SD N + G+G IT E + + P Sbjct: 262 VQEDPN-----FETPFEHHIYASDIANDAYTVTNANVQHMGLGHDITVEHMAMQRRNAP- 315 Query: 299 PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 ++ NPPYGERL + L AL+S++G +K+++ G + + + L + LR Sbjct: 316 --EAPVLMVLNPPYGERL-TRFDLEALYSMIGSELKHKYTGSKVWIIAPKSKLFHAIGLR 372 Query: 359 ADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEK 408 + NG L+C ++Y + E D +AE T + E+ Sbjct: 373 HSSRLDLLNGDLECELRSYELFEGKRDDFKRDLAEGKTRTYASSRPYRER 422 >UniRef50_Q2LXZ8 Predicted N6-adenine-specific DNA methylase n=3 Tax=Bacteria RepID=Q2LXZ8_SYNAS Length = 406 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 114/395 (28%), Positives = 189/395 (47%), Gaps = 6/395 (1%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 + + +G+ LK E+E+L + + +G + + R R++ L Sbjct: 14 RILVTCPKGIAPYLKNEIESLDFPVDYEREAAILTEGTLEDSLRLNLHLRTGHRVLYLLA 73 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 E V +LY + ++W + + V + + +IR++++ K KDAIVD R Sbjct: 74 EGAVNDPNELYRWIAGLSWESILHEDGYLCVTSTVDHPSIRDTRFANQKCKDAIVDRLQR 133 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 RP+ V+++ A + LD SG+ L RGYR AP++ETLAAAIV Sbjct: 134 ICGRRPDSGPARDRAVVHLFWKGTRAQLYLDTSGEPLSRRGYRKIPVQAPMQETLAAAIV 193 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 + +GW P ++PMCGSGT+ IEAA++A +RAPGL R +GF A+W+E++ + Sbjct: 194 LATGWNGKGPFVNPMCGSGTIAIEAALIALNRAPGLLRSNFGFRHIKGFPAALWKELRRK 253 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 AQ +A + +D D R I A NA AG+ I V D + P Sbjct: 254 AQEKA---ARRFPGQIIATDMDRRAIAAAEQNAVNAGVQNWIRLAVCDYTETDIPP---E 307 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 G V+ NPPYGERL + L ++ +G +KN G+ +F+ + +L + L+ ++ Sbjct: 308 AGIVIMNPPYGERLGNVQKLEKTYAGMGNFLKNACPGYRGFIFTGNIELARKVGLKTRRR 367 Query: 363 YKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTN 397 N ++C Y + E + + E+ + Sbjct: 368 LVFFNSGIECRLLEYELYEGSYRDRMPPKEEELRH 402 >UniRef50_C9YEX1 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YEX1_9BURK Length = 448 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 125/421 (29%), Positives = 192/421 (45%), Gaps = 30/421 (7%) Query: 3 SLFASTARGLEELLKTELENL-GAVE--CQVVQGGVHFKGDTRLVYQSLMWSRLASRIML 59 +LF A G+EE L E+ + G +GGV + ++SRLA R+++ Sbjct: 29 TLFLPCAAGVEEYLAPEILQITGLPPGCITKQRGGVAVRTGFEHAMLLNLYSRLAQRVLV 88 Query: 60 PLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDA 119 + + S+ DLY + W F P + V + + + + + A+KVKDA+ D Sbjct: 89 LVSYTEYRSEQDLYRAAMQVAWERWFTPRESIKVEVTAQHSPLTSLNFAALKVKDAVCDR 148 Query: 120 FTR-KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLA 178 F RP+V+ PD+R+ L + S+ +D SG+ L RG+R+ G AP+KETLA Sbjct: 149 FREVAGGVRPDVNTQWPDVRIYAHLTTDACSLYIDTSGEPLFKRGWREDKGDAPLKETLA 208 Query: 179 AAIVMRSGWQPGT----PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEA 234 AA++ SGW G PL DP CGSGT++IEAA +A + A G R R+ F + Sbjct: 209 AAMIAASGWASGDDDLLPLYDPCCGSGTVVIEAAQIACNIAAGSLR-RFAFEKYKPFRSE 267 Query: 235 IWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQL 294 W +K EA K + YGSD R++ A NA+ AG+ ++I F D Q Sbjct: 268 EWAAMKKEAADAVVKPEPGQKALIYGSDVSFRMVDFAERNAQRAGVADVIEFRGGDALQR 327 Query: 295 TNPLPKGPY--GTVLSNPPYGER-------------------LDSEPALIALHSLLGRIM 333 P+ G ++ NPPYGER L + + L Sbjct: 328 MPPIDVSETGGGVMVINPPYGERIGIGGVAGEGEGARFGARELAEADDGVDFFNQLASHW 387 Query: 334 KNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAE 393 K + GW + + L S ++L+ ++ NGPL+C + + + A A Sbjct: 388 KKNYSGWTAWMLTPDLKLPSKMRLKESRRVPMWNGPLECRLFKFDMVKGRLAKPAAPEAH 447 Query: 394 D 394 D Sbjct: 448 D 448 >UniRef50_Q26FC8 N6-adenine-specific DNA methylase n=20 Tax=Bacteroidetes RepID=Q26FC8_9BACT Length = 388 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 122/387 (31%), Positives = 202/387 (52%), Gaps = 10/387 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 + A T GLEE+L+ EL LGA + V F+GD +Y++ M R A RI++P+ Sbjct: 5 FKMIAKTLFGLEEVLEKELRQLGATRIEKGVRMVSFEGDLGFMYKANMMLRTAIRILVPI 64 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 + +++DLY G+ ++W++ T AVH + + +SQY A+K KDAIVD Sbjct: 65 HSFRARNEVDLYDGIYQMDWSQYLTAHDTLAVHGTVASQYFNHSQYVALKTKDAIVDQIR 124 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 RP+VD PD+R++V ++ + +++D SG+ L RGYR IAPI E LAA + Sbjct: 125 NNTGRRPDVDTKHPDLRISVHINDQKVDVSIDSSGEPLFKRGYRQETNIAPINEVLAAGL 184 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 ++ S W + +DPMCGSGT+ IEAAM+A + AP L+R +GF W +D A+++ ++ Sbjct: 185 ILLSDWDQRSQFIDPMCGSGTIAIEAAMIAANIAPNLNRPEFGFEKWPNYDNALFEMIQE 244 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 + R E+ D+D +++A+ N + A + + I E D + Sbjct: 245 SCLKKMR----EFEGPIIARDADGYTLEKAKENVKNANLQDFIKLEKGDFFRDHQ----S 296 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 ++ NPPY ER++ + A + +G +K ++ G + + + D L + LR + Sbjct: 297 AQAFLMFNPPYDERIEIDTD--AFYKSIGDALKQRYTGSTAWMITGNLDALKSVGLRPSR 354 Query: 362 QYKAKNGPLDCVQKNYHVAESTPDSKP 388 + K NG L+ Y + T Sbjct: 355 KIKVYNGKLEARFVKYEMYRGTKKLHK 381 >UniRef50_A6DTJ8 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTJ8_9BACT Length = 387 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 129/364 (35%), Positives = 183/364 (50%), Gaps = 7/364 (1%) Query: 18 TELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQ 77 EL+ LGA E Q G+HF D +++ + SRL SR + PL S+ LY V+ Sbjct: 26 DELKELGAQEIQQDYRGMHFHADMVTLFKIVYCSRLFSRFLAPLHRFDALSEDMLYQRVK 85 Query: 78 AINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDI 137 + W E+ PG TFA+ + N I +S++ A K+KDAI D K RP++D PDI Sbjct: 86 TMKWEEIIKPGQTFAIFANVGNSKINHSKFAAQKMKDAICDRLREKRGERPDIDPKNPDI 145 Query: 138 RVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPM 197 +N++++K A+IALDLSG H RGYR + AP+ E+LAAA + S W TPL DPM Sbjct: 146 WLNLFINKNKATIALDLSGGSHHKRGYRQDSVEAPLMESLAAAFIRASEWDGRTPLYDPM 205 Query: 198 CGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSH 257 CGSGT+L EA M A G R R+GF D IW EVKA+A R + Sbjct: 206 CGSGTILAEALMHAARIPAGYLRKRFGFEHMPDFDADIWSEVKAKADARIKL---PQEGL 262 Query: 258 FYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLD 317 GSD DA ++ + N G+ I L T+++NPPYG RL Sbjct: 263 ISGSDMDADAVRASIVNLSYLPGGDKIKIIQSRFQDL----DDLEPCTIITNPPYGMRLM 318 Query: 318 SEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNY 377 + + + +G +K + G N +F L+ + LR +++ NG LD + Sbjct: 319 KDEDVESFTGEIGDFLKKKCAGSNAWVFFGERKLILKIGLRPSRKFPLSNGGLDGRLCKF 378 Query: 378 HVAE 381 + Sbjct: 379 EMYR 382 >UniRef50_B5JRH4 Putative RNA methylase family UPF0020 n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JRH4_9BACT Length = 390 Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 109/392 (27%), Positives = 180/392 (45%), Gaps = 7/392 (1%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 ++ + + E+L EL++LG +V GV +GD + R R++ + Sbjct: 5 TILVTCPKACSEILAEELDSLGYKPSSLVSNGVFIEGDYEDCIHLNLTLRTGLRVLWEVD 64 Query: 63 ECKVYSDLDLYLGVQAINWTEMFN-PGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 DLY + W + A ++ S NDT+ N+ + +++KDAIVD Sbjct: 65 NFTARDGEDLYHQAVRMPWEDWIPAEDAYISIVSSVRNDTVVNTNFPNLRLKDAIVDRMR 124 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 RPN + + ++ H+E I LD SG + R YR G AP++E LAA++ Sbjct: 125 EVTGDRPNSGNERDRGVIFLYWHEEEVCIYLDTSGIPISNRNYRAMPGAAPMRENLAASV 184 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + + W +P L+PMCGSGTL IEAA++A+ R + F + + + E++ Sbjct: 185 ISATRWDKASPFLNPMCGSGTLAIEAALMASGVPGQQLRHEFAFQHFKPFNPKRYDEIRK 244 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 E + R L SD D + I+ A TNA+ AG+ LI F V D P Sbjct: 245 EVRKRVPDSL---PFPIIASDIDRQAIRAAETNAKKAGVAHLIEFRVCDFRDAPIP---E 298 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 G ++ NP YGERL + L + +G + K + G+ +F+ + L + L+ + Sbjct: 299 EPGVIVLNPEYGERLGEQRQLEDTYKAIGDLFKKRCPGYWGYIFTGNKTLGKRVGLKTKR 358 Query: 362 QYKAKNGPLDCVQKNYHVAESTPDSKPAMVAE 393 + + NGP++C Y + T + K Sbjct: 359 KIEFYNGPIECRLLEYELYGGTRNPKYTDQES 390 >UniRef50_D2BKU1 RNA methyltransferase n=24 Tax=Lactobacillales RepID=D2BKU1_LACLK Length = 384 Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 116/388 (29%), Positives = 186/388 (47%), Gaps = 14/388 (3%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVV-QGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 L A+++ GLE L+ EL NL + + V F+G+ + ++ +W R A R+ + Sbjct: 5 FKLLATSSSGLESLVARELRNLEIENVSIDDRSRVFFEGNLATIAKANLWLRTADRVKIV 64 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAV-HFSGLNDTIRNSQYGAMKVKDAIVDA 119 +GE K + +L+ V A+ W E+ G+ F V + T+ N K AIV Sbjct: 65 VGEFKARTFDELFENVYALPWAELIPFGSQFPVSKAKAVKSTLHNEPSIQSITKKAIVKK 124 Query: 120 FTRKNLPRPNV--DRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETL 177 V + + + LHK+ A++ +D +GD L RGYR G AP+KE + Sbjct: 125 LQTTYHRPEGVPIPENGAKFSIEIALHKDMATVLIDTTGDSLFKRGYRSEKGEAPLKENM 184 Query: 178 AAAIVMRSGW--QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAI 235 AA+I++ + W P +DP CGSGT IEAAMLA + APG++R + F+ W DE I Sbjct: 185 AASIILLTNWLANPRRAFVDPTCGSGTFTIEAAMLALNMAPGMNRP-FAFTAWPWFDEEI 243 Query: 236 WQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLT 295 ++ KA A+ + R + G D D ++I A+ NA AG+ ++I ++ + Sbjct: 244 LKQEKALAKKQIRT---DLELDIQGFDIDGKMIDIAKHNALAAGLSDVIKYKQMRLQDFR 300 Query: 296 NPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCL 355 G ++SNPPYG RL+ E A+ AL+ +G+ W+ + ++ Sbjct: 301 TDKFD---GVLVSNPPYGVRLEDEEAVAALYGEMGKTF-APLETWSKYILTSDVAFEKHY 356 Query: 356 QLRADKQYKAKNGPLDCVQKNYHVAEST 383 +A K+ K NG L Y Sbjct: 357 GAKATKKRKLYNGTLRTDLYMYFGKRMK 384 >UniRef50_Q11Q19 RNA methylase family protein n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11Q19_CYTH3 Length = 392 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 117/389 (30%), Positives = 188/389 (48%), Gaps = 5/389 (1%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 + + A L EL E+ NL Q++ G+ +G + M R A++++ L Sbjct: 9 DILITCAPDLSELTGREINNLAIPIKQILPHGIVVEGTAQTAMYLCMHLRTANKVLFLLK 68 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 E K + DLY + I W F+ + F++ N TIR++++ +K KDAI D F Sbjct: 69 EAKAATPDDLYRVAKNIPWDNFFDNTSYFSIDSFVQNSTIRDTRFANVKCKDAIADYFVE 128 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 K RP+ + + ++ + SI LDLSG+ + GYR AP+ ETLAA ++ Sbjct: 129 KTTKRPDSGPLRDKVVIFIYWRENDLSIYLDLSGEPISRHGYRLNPWKAPMAETLAAGVI 188 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 + S W P TP ++PMCGSGTL IEAA++ T + PGL R + F + W+ ++ Sbjct: 189 ITSEWNPTTPFINPMCGSGTLAIEAALIGTHKIPGLVREDYAFQHIHGYVAETWKTMREM 248 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 AQ + L SD D R + A+ NA AG+ LI F + D P+ + Sbjct: 249 AQQKVLPAL---PFKIIASDHDQRALDAAKVNAEKAGVDHLIDFVLSDFQD--TPVEENQ 303 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 G V+ NP YGERL E +L+ + +G K + GG+ +F+ + +L + L+ ++ Sbjct: 304 AGVVILNPEYGERLGDEESLVLTYKEIGDFFKQKCGGYKGFVFTGNLELAKRIGLKPKRK 363 Query: 363 YKAKNGPLDCVQKNYHVAESTPDSKPAMV 391 K + ++C Y + T Sbjct: 364 IKFFSAKIECRLMQYELYSGTKRVVFKTE 392 >UniRef50_Q311V9 Putative uncharacterized protein n=2 Tax=Desulfovibrio RepID=Q311V9_DESDG Length = 393 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 103/388 (26%), Positives = 174/388 (44%), Gaps = 3/388 (0%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 ++ + LL TEL+ LG + GV + D + + R A+R++ + Sbjct: 9 TVLVTCPLAASALLATELKALGFTPRNELPAGVEVQADLNDCMRMNLHLRTANRVLYQVA 68 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + LY I+W P ++ S N TIR+S++ ++KDA+VD Sbjct: 69 AFRARDADALYRAASRIHWELFIAPEGYVSIASSVDNPTIRDSRFANQRLKDAVVDRIRS 128 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + RP+ + + + H + + +D SG+ L RGYR AP++ETLAAA++ Sbjct: 129 RTGRRPDSGPLQTGVVLFLHWHDDWCRLYVDTSGEPLSRRGYRKNPWKAPMQETLAAAVL 188 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 M +GW G L++PMCGSGTL +EA ++A + APGL R + F + IW + Sbjct: 189 MAAGWPGGGHLINPMCGSGTLAVEAVLMAMNSAPGLLRDSFCFMHLPGYKPEIWDALLDR 248 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 A+ + E +D ++ ++ NA AG+ I F V D Q P P Sbjct: 249 AEAQE---TGEIPGRVIATDIVPEAVKASQENAVRAGVAGFIEFGVCDFTQTDIPQPSEG 305 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 ++ NP YG RL L ++ +G K + GG+ +F+ + L + LR ++ Sbjct: 306 RDVIIMNPEYGARLGDAAQLEGVYRAVGDFFKQRCGGYTGYVFTGNMKLAGNVGLRTSRR 365 Query: 363 YKAKNGPLDCVQKNYHVAESTPDSKPAM 390 + ++C Y + + Sbjct: 366 IPFHSAKIECRLLEYELYSGSRKHADHQ 393 >UniRef50_A8ZTQ6 Putative RNA methylase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZTQ6_DESOH Length = 395 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 120/364 (32%), Positives = 179/364 (49%), Gaps = 8/364 (2%) Query: 18 TELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQ 77 EL +L A + + G+ F D +Y+ SRL SR + PL DLY + Sbjct: 39 QELADLSAADIEPTPRGIRFSADRATLYKINYTSRLLSRCLAPLAVFPCRHTDDLYSAGK 98 Query: 78 AINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLP-RPNVDRDAPD 136 A+ W + F G TFA+ +N I +++Y +++KDAI D FT RP+VD PD Sbjct: 99 ALPWKDFFIKGRTFAITADVVNSDITDARYTTLRLKDAIADYFTENTGRQRPDVDTRNPD 158 Query: 137 IRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDP 196 +RV+V + A I+LD SG+ LH RGYR+ + AP++ET+AAAI+ S W TPL DP Sbjct: 159 VRVDVTILDNRAIISLDTSGEALHKRGYRELSVSAPMQETVAAAILHFSRWDKKTPLYDP 218 Query: 197 MCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSS 256 MCGSGTLL EA M A + G+ RG +GF D +WQ+V+ EA Sbjct: 219 MCGSGTLLCEALMAACNIPAGILRGAFGFQILPDFDPVLWQQVRKEADAEI---TEIPEG 275 Query: 257 HFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERL 316 GSD + + A+TN G ++ + + P+ +++NPPYG R+ Sbjct: 276 LIAGSDVNPAAVTAAKTNLMGLHYGGRVSITQQAFLDI----PELENRLIITNPPYGIRM 331 Query: 317 DSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKN 376 + L + LG +K + G ++ D + L L+ + + G LD Sbjct: 332 GRDRDLRFFYKCLGDFLKQKCRGSTAWIYFGDRDYIKNLGLKTAWKLPLRAGGLDGRLVR 391 Query: 377 YHVA 380 Y + Sbjct: 392 YELY 395 >UniRef50_A4XLV3 Putative RNA methylase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XLV3_CALS8 Length = 370 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 105/376 (27%), Positives = 175/376 (46%), Gaps = 11/376 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 LF +TA G+E + K EL LG + +V G + +GD + + + R A+R+ L Sbjct: 2 ELFIATAFGVESVTKEELVRLGYKDLKVENGRIFVQGDIEDIPRLNINLRTANRVFAILK 61 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + K + +L+ G+ W E+ A + + + K AI++ + Sbjct: 62 KFKAETFDELFSGIYDFEWQEILPKDANILITGRSEKSKLFSISSCQSITKKAIIEKLKK 121 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 K + ++ + L +TA + D +G+ LH RGYR +AP+KE +AA +V Sbjct: 122 KY-SVSWFEETGNLYKIEIALLNDTAYVLFDTTGESLHKRGYRKLQSLAPLKENIAATLV 180 Query: 183 MRSGWQP-GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + S W+P L DP CGSGT+ IEAAM+A + APGL+R + + +W + + Sbjct: 181 ILSRWRPQQEVLWDPFCGSGTIPIEAAMIAKNIAPGLNRT-FLAEQNGFVSQDLWNKARL 239 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 E + + SD D ++I A+TNA+ AG+ + I F D ++ Sbjct: 240 EVIGKID---YNSKFNILASDIDEKMIYIAKTNAKAAGVEKDIRFFKADGRKIKK---SS 293 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 G +++NPPYGER+ + L+ G+ +++ F GW + S +ADK Sbjct: 294 DKGIIITNPPYGERI-DNSDIFNLYRDFGKCLRD-FSGWRFFILSGYDKFEKAFGKKADK 351 Query: 362 QYKAKNGPLDCVQKNY 377 K NG + Y Sbjct: 352 NRKLYNGKIKTYLYFY 367 >UniRef50_C2KWZ1 Site-specific DNA-methyltransferase (Adenine-specific) n=6 Tax=Firmicutes RepID=C2KWZ1_9FIRM Length = 387 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 123/390 (31%), Positives = 183/390 (46%), Gaps = 16/390 (4%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 L GLE + K E+++LG V G VHF GD + ++ ++ R R++L LG Sbjct: 5 ELVVPCHFGLEAVCKKEIQDLGYDVHTVSDGKVHFIGDAEAIVRANIFLRTGERVLLKLG 64 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAV-HFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 S DL+ G +A+ E A+F V S + + + + +K A+VD Sbjct: 65 SFHAESYEDLFQGTKALPLEEYLPKDASFWVTKASSVKSKLFSPRDIQSVMKKAMVDRMA 124 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 + V L+K+ + LD SGD LH RGYR + G APIKETLAA++ Sbjct: 125 SYYHQ-SFFEEHGAKYPFRVSLYKDEVLLCLDTSGDSLHKRGYRLKMGKAPIKETLAASL 183 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQ-HDEAIWQEVK 240 ++ S W+ P +DPMCG+GT IEAAM+A APG+HR + W + W Sbjct: 184 ILLSKWREDAPFVDPMCGAGTFPIEAAMIAAKIAPGMHRH-FTAEAWENLIPKKEWDYAL 242 Query: 241 AEAQTRARKGLAEYS-------SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQ 293 EA + L E G D D +I R NA AG+G+LI F+ ++V + Sbjct: 243 EEAGDEIDRSLLETKKNSYGKMVDIQGYDIDPAMIPVCRENAERAGVGKLIHFQEREVGK 302 Query: 294 LTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLS 353 ++ G +L+NPPYGER++ + L L++ L ++ W L L +A Sbjct: 303 MS---HSKRGGLILTNPPYGERIEDKRNLPLLYTELREAYED-LDDWRLCLITAYEQAEK 358 Query: 354 CLQLRADKQYKAKNGPLDCVQKNYHVAEST 383 L +ADK K NG + Y+ Sbjct: 359 YLG-KADKNRKLYNGMMKTYFYQYNGKGRK 387 >UniRef50_A1V086 THUMP domain protein n=52 Tax=Burkholderia RepID=A1V086_BURMS Length = 430 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 130/423 (30%), Positives = 193/423 (45%), Gaps = 39/423 (9%) Query: 1 MNSLFASTARGLEELLKTELENLGAVEC-------QVVQGGVHFKGDTRLVYQSLMWSRL 53 + FA RGLE L EL + A V GGVHF+G + + SR+ Sbjct: 6 LFDFFAPCPRGLEAALAAELAQIAARHAIAPYDAGAQVPGGVHFRGAWAAGMAANLHSRI 65 Query: 54 ASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVK 113 ASR++L + ++ D+Y W F T V + + +++ ++ ++VK Sbjct: 66 ASRVLLKIAHRPYRNEQDVYALALEQPWERWFASTQTLRVDITAIKSPLKSLEFATLRVK 125 Query: 114 DAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPI 173 DAI D K RP++D PD+RV +L ++ LD SG+ L RG+R G AP+ Sbjct: 126 DAICDRLREKTGARPSIDTAQPDVRVFAFLTAGDCTLYLDTSGEPLFKRGWRLDKGAAPL 185 Query: 174 KETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDE 233 +E LAA I+ +GW PGTPL DPMCGSGT + EAA +A APG+ R R+GF Q+D Sbjct: 186 RENLAAGILRLAGWTPGTPLYDPMCGSGTFVAEAAQIALGVAPGVER-RFGFEKLKQYDI 244 Query: 234 AIWQEVKAEAQTRARKGL-AEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVA 292 WQ +K A R +GSD ++++AR N AG+ L + D Sbjct: 245 TAWQTLKVAAMDAKRAARGKRDDLLIFGSDISGDMLEKARANLERAGVPSL-WLKQIDAR 303 Query: 293 QLTNPLPKGPYGTVLSNPPYGERL------------------DSEPALI---------AL 325 +T P G +++NPPYGER+ + A Sbjct: 304 NMTPPA--AAPGVIVTNPPYGERIEVRGRGPRGDVRETGKNRGGDEAFRRTHADSPDSEF 361 Query: 326 HSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPD 385 LG +K +F GW + S+ L L+LR + NG L+C + + + Sbjct: 362 FRALGDALKQRFAGWQAFMLSSDRTLPGQLRLRESAKTPLFNGALECRLFRFDLIAGSIR 421 Query: 386 SKP 388 +P Sbjct: 422 QRP 424 >UniRef50_A6EAV4 Predicted N6-adenine-specific DNA methylase n=5 Tax=Sphingobacteriales RepID=A6EAV4_9SPHI Length = 393 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 123/387 (31%), Positives = 191/387 (49%), Gaps = 5/387 (1%) Query: 5 FASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGEC 64 + + L L+ E++ LG + GV + + R AS+I+ L Sbjct: 11 ILTCNKRLSSYLQEEVKALGYSIVRDFPTGVELNITLTECIKLNLNLRCASQILYCLKSF 70 Query: 65 KVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKN 124 K + +LY + + W E+ + F+V + N TI + +KVKDAIVD K Sbjct: 71 KANNPEELYQELVQMPWEELIDFAGYFSVTSNVDNPTITTPLFANLKVKDAIVDRIKDKK 130 Query: 125 LPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMR 184 RPN DA V+++ A I LD SG+ L GYR G AP+ E LA++++ Sbjct: 131 GIRPNSGSDANKAVVHLYWKDSEADIFLDTSGETLAKHGYRKIPGKAPMLEALASSVIFS 190 Query: 185 SGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQ 244 +GW +P ++PMCGSGTL IEAA++AT+R PGL+R +GF +DE ++ AE + Sbjct: 191 TGWDQKSPFVNPMCGSGTLAIEAALIATNRRPGLYRMNYGFMHILGYDEEVF---FAERR 247 Query: 245 TRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYG 304 + + +D + +R NA+ AG+ LI+FEV D A +P+G G Sbjct: 248 ILKEQVVKNTDIQIIATDISEDAVDVSRKNAKTAGVDGLISFEVCDFAD--TVVPEGGRG 305 Query: 305 TVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYK 364 V+ NP YGERL L + +G MK G++ +F+ +PDL + L+A ++ + Sbjct: 306 VVIFNPEYGERLGVHSKLELTYKRMGDFMKQHCKGYSGYIFTGNPDLAKKIGLKAARKIE 365 Query: 365 AKNGPLDCVQKNYHVAESTPDSKPAMV 391 NG LDC Y + + T + Sbjct: 366 FYNGKLDCRMLEYELYDGTRRTDTRED 392 >UniRef50_Q6MD72 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MD72_PARUW Length = 380 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 111/357 (31%), Positives = 177/357 (49%), Gaps = 8/357 (2%) Query: 26 VECQVVQGGVHF-KGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEM 84 + Q GV + + +Y+ SRLA+R++LPL + + LY + I+W+ Sbjct: 30 TDLQTGYRGVFINQWNWADIYKINYASRLATRVLLPLSRFRCFDRKSLYRHIYDIDWSLY 89 Query: 85 FNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLH 144 G TFA+ + + +RNS + A VKDAI D K RP+VD P +++N+++ Sbjct: 90 LKEGNTFAIDANVHHRELRNSLFAAQVVKDAICDQLRHKVGRRPSVDVQQPHVQLNLYIQ 149 Query: 145 KETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLL 204 A I+ D SG LH RGYR AP++ETLAAAI+ + + LDP CGSGTLL Sbjct: 150 HSLAIISFDTSGTPLHKRGYRQETVEAPLQETLAAAILRLAKYSADKVFLDPCCGSGTLL 209 Query: 205 IEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSD 264 IEAA++A+ PG R +WGF + W +V+ + H +G D + Sbjct: 210 IEAALMASQTPPGYLRQKWGFMNHPDYQANEWLKVRNRLDEHRKTI---QPGHLFGIDIN 266 Query: 265 ARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIA 324 + +TN + AG G+ + D + + +P +++NPP+G+RL+ E L Sbjct: 267 KSAVWATKTNLKAAGFGQAVEVLQADFREFSPTVP---PDLIVTNPPHGKRLEEEDQLRP 323 Query: 325 LHSLLGRIMKNQFGG-WNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVA 380 + LG MK + +F+ + +L + L A K++ NG +D Y + Sbjct: 324 FYRSLGDFMKKKTARPAQGFVFTGNLELAKEVGLAASKRHVLNNGGIDSRLLAYELY 380 >UniRef50_C5AB46 Predicted N6-adenine-specific DNA methylase n=3 Tax=Burkholderia RepID=C5AB46_BURGB Length = 435 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 130/426 (30%), Positives = 193/426 (45%), Gaps = 40/426 (9%) Query: 1 MNSLFASTARGLEE--------LLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSR 52 + FA RGLE + + V GGVHF+G + + SR Sbjct: 5 LFDFFAPCPRGLEAALAAELAEIGARRIAGAPFEAGTQVPGGVHFRGGWMAGMAANLHSR 64 Query: 53 LASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKV 112 +ASR++L + + S+ D+Y W F T V + + +++ ++ ++V Sbjct: 65 IASRVLLKIADRPYRSEQDVYALALEQQWERWFAATQTLRVDVTAIKSPLKSLEFATLRV 124 Query: 113 KDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAP 172 KDAI D K RP++D PD+RV +L ++ LD SG+ L RG+R G AP Sbjct: 125 KDAICDRLREKTGARPSIDTAQPDVRVFAFLTATHCTLYLDTSGEPLFKRGWRLDKGAAP 184 Query: 173 IKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHD 232 ++E LAA I+ +GW P PL DPMCGSGT L EAA +A D APG+ R R+GF Q+D Sbjct: 185 LRENLAAGILRVAGWTPAVPLYDPMCGSGTFLAEAAQIALDVAPGVER-RFGFEKLKQYD 243 Query: 233 EAIWQEVKAEAQTRARKGLAEY-SSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDV 291 WQ +K A R + + YGSD ++ +AR N AG+ I+ + D Sbjct: 244 ITAWQTLKVAAMDAKRAARGRHAALPVYGSDISGDMLDKARANLERAGVPA-ISLKQVDA 302 Query: 292 AQLTNPLPKGPYGTVLSNPPYGERL------------------DSEPALI---------A 324 + P G +++NPPYGER+ ++ A Sbjct: 303 RFMAPPTDT--PGLIVANPPYGERIEVRGRGPRGDARETGRNRGNDDAFRRTHTDAPDGE 360 Query: 325 LHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTP 384 LG +K +F GW L S+ L L+LR + NG L+C + V + Sbjct: 361 FFIALGNALKQRFAGWQAFLLSSDRSLPGQLRLRESAKTPLFNGALECRLFRFDVVAGSV 420 Query: 385 DSKPAM 390 +PA Sbjct: 421 RQRPAQ 426 >UniRef50_B0PDR5 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=B0PDR5_9FIRM Length = 406 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 115/379 (30%), Positives = 175/379 (46%), Gaps = 6/379 (1%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +L GLE +L E++ LG V G V F GD +V ++ +W R A R+ + +G Sbjct: 27 TLMCPCLFGLESVLSFEVKKLGGENIVVTDGRVTFDGDLSMVAKANIWLRTAERVGIVIG 86 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + + +L+ + W + F V +N + + +K A+V F Sbjct: 87 SFRAETFTELFDQTAELPWEQFIGEDDCFPVKGWSVNSKLFSMSDCQRIIKRAVVRRFEN 146 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + ++ +HK+ ++ LD SG GLH RGYR A APIKETLAA IV Sbjct: 147 VY-HKTLFAETGALYQIQYSIHKDQVTLVLDTSGPGLHKRGYRANANDAPIKETLAAGIV 205 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 + + + + DPMCGSGTL+IE+A+ A + APG+ R R+ GW ++ E + + Sbjct: 206 DLARVRGDSLVFDPMCGSGTLVIESALRALNIAPGI-RRRFAAQGWRCFQNGLFDEARRD 264 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 A ++ R + + SD D ++ R NA AG+ I DVA LP+G Sbjct: 265 AASQVR---RDAPFEAFASDIDPEAVRLTRENAAKAGVAGRIHVVQADVADFAPQLPEGR 321 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 G VL+NPPYGER+ E AL LG + G++ + S A ++ Sbjct: 322 SGIVLANPPYGERMLGEQEAQALSRTLGASFPKR-DGFSYYIISPDDGFEDLFGRPAARR 380 Query: 363 YKAKNGPLDCVQKNYHVAE 381 K NG + C Y Sbjct: 381 RKLYNGMIKCQVYMYFDKP 399 Score = 43.4 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 22/57 (38%), Gaps = 2/57 (3%) Query: 563 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE-ANEQFDLIFIDPPT 618 D+ + N G+ GR H ++QAD + + + ++ +PP Sbjct: 276 EAFASDIDPEAVRLTRENAAKAGVAGRIH-VVQADVADFAPQLPEGRSGIVLANPPY 331 >UniRef50_B9MKJ8 Putative RNA methylase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MKJ8_ANATD Length = 371 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 104/379 (27%), Positives = 169/379 (44%), Gaps = 11/379 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M LF +T G E + K EL LG +V G + + + + + R +RI Sbjct: 1 MIELFVATPLGTESVAKEELVRLGYKNLKVENGRIFVSAELEDIPKLNINLRTPNRIFAI 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L + K + +L+ GV + +W E+ A V + + + K AIV+ Sbjct: 61 LNKFKAKTFDELFDGVYSYSWHEILPKDAKILVTGRTEKSKLVSIRACQSITKKAIVEKL 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 K + ++ + + + A + D +GD LH RGYR AP+KE +AA Sbjct: 121 KSKY-SVNLLGETGQLFKIEIAMINDIAYLLFDTTGDSLHKRGYRKLISKAPLKENIAAT 179 Query: 181 IVMRSGWQPG-TPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 +++ + W+ DP CGSGT+ IEAAM+A + APG++R + IW++ Sbjct: 180 LILLAKWKDDEEVFWDPFCGSGTIAIEAAMIARNIAPGINRT-FLAEENGFISPQIWKKS 238 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 + EA R + SD D +I A+ NA+ G+ + I F D ++ P Sbjct: 239 RLEAIERID---YQKKFEILSSDIDENMIHIAKVNAKEIGVDKDIRFFRADARKIKKP-- 293 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 G +++NPPYGER+ + + L+ GR +K F W+ + SA + +A Sbjct: 294 -SEKGIIVTNPPYGERI-DDINIFELYRDFGRCLKT-FDNWHFFVLSAYSKIEKAFGRKA 350 Query: 360 DKQYKAKNGPLDCVQKNYH 378 DK K NG + Y Sbjct: 351 DKNRKLYNGKIKTYLYFYF 369 >UniRef50_C8QZA7 Putative RNA methylase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZA7_9DELT Length = 383 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 117/355 (32%), Positives = 181/355 (50%), Gaps = 7/355 (1%) Query: 26 VECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMF 85 + GV+F + ++Y+ + +RL SR++ PL +S LY A+ W ++ Sbjct: 36 TRLNPIPRGVYFTAEPPVLYRIVYQTRLCSRVLAPLLHFNCHSTKYLYKTALALPWEKLL 95 Query: 86 NPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHK 145 +F ++ + + +S+Y A+ +KDAIVD F ++ RP+VDR PD+ ++ + + Sbjct: 96 GVAQSFMINARVSDSRVGHSRYAALCLKDAIVDRFQQQFGGRPDVDRQQPDLVFDLHIRR 155 Query: 146 ETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLI 205 A I+LDL+G+ LH RGYR +G API+ETLAAA+V SGW PL+DP CGSGT+L Sbjct: 156 NRAVISLDLAGESLHRRGYRRESGEAPIQETLAAALVDFSGWDGTRPLVDPFCGSGTILA 215 Query: 206 EAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDA 265 EA + PG R R+G + A+WQ V+ EA + + + GSD Sbjct: 216 EALLRRAAIPPGRLRRRFGPANLPDFSPALWQRVQKEADGKMQSL---PAGLLAGSDQSK 272 Query: 266 RVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIAL 325 I+ AR N L G+ + V L P +++NPPYG RL + AL Sbjct: 273 SAIRMARRNLALLPQGDRVELRVSPFQAL----PPINNAVIVTNPPYGIRLGDQQEAAAL 328 Query: 326 HSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVA 380 LG +K+ G ++ P LL + L+ ++ K NG L+ V Y + Sbjct: 329 IRELGSFLKHHCTGSTACIYFGDPQLLKAIGLKPSRRKKLNNGGLEGVAACYELY 383 >UniRef50_A6GTU6 Probable oxidoreductase n=1 Tax=Limnobacter sp. MED105 RepID=A6GTU6_9BURK Length = 441 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 130/417 (31%), Positives = 201/417 (48%), Gaps = 24/417 (5%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + + FAS RGLEE+L ELE++GA + + V GG F+ R + W+R A RI L Sbjct: 29 VFNCFASCPRGLEEILVAELESMGAQKTRAVTGGCTFEASWRQATRMTYWTRFAGRIGLE 88 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L + S+ + Y ++++W F TF V + L I++ ++ +++KDA+ DAF Sbjct: 89 LARGECTSEDEFYHIAKSVDWHNWFKLSNTFRVDLNNLGADIQSVRFTQLRLKDAVCDAF 148 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + RPN+ +APD+R+ ++ A + +DL+G+ L RG+R+ AG+AP+KE LAA Sbjct: 149 LERFDERPNISVEAPDVRIFAAINPTEAMVYIDLAGENLFKRGWREEAGVAPLKENLAAG 208 Query: 181 IVMRSG----WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 + + + LDP CGSGTL+IE+ DRAPGL R + F Sbjct: 209 LWHIARQSEAGKNADVFLDPFCGSGTLVIESLSQLCDRAPGLER-AFAFENLKPFTPEWG 267 Query: 237 QEVKAEAQTRARKGLAE--YSSHF--YGSDSDARVIQRARTNARLAGIGEL-----ITFE 287 +E++ +A R GL + + +F Y SD +I A+ N AG EL + F Sbjct: 268 KELQEDANRRFNAGLDKALTTPYFQWYASDITELLIDIAQENLARAGFEELLDAGIVQFA 327 Query: 288 VKDVAQLTNPLPKGPYGTVLSNPPYGER-------LDSEPALIALHSLLGRIMKNQFGGW 340 +D + P P G V SNPPYGER + + A L G +K F GW Sbjct: 328 QRDALTVEPPSPS---GIVFSNPPYGERVRAKGADVPEDEAYERLFKAYGDHLKMNFSGW 384 Query: 341 NLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTN 397 LFS ++ L L ++ NGP++C + + + Sbjct: 385 TAFLFSGDLEIKKTLGLSPKRKRPLFNGPIECRLFEIPLTRGVYRPRATSEQPPEES 441 >UniRef50_A8G252 Putative RNA methylase family UPF0020 n=7 Tax=Prochlorococcus marinus RepID=A8G252_PROM2 Length = 374 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 112/376 (29%), Positives = 181/376 (48%), Gaps = 7/376 (1%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 ++ AS GLE+ L E+ NLG + ++F+ D Y+ +SRLA R + Sbjct: 2 NVVASAPEGLEKSLAEEISNLGGFNINTYKRFINFECDIETFYRVHFYSRLAFRFYREIA 61 Query: 63 ECKVYSDLDLYLGVQ-AINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 Y LY GV+ + +W + TF V +G ++ ++ + A++VK++I D Sbjct: 62 TFSCYDKQSLYEGVRDSFDWLNWLHFEKTFNVKVTGRTSSLSHTHFTALEVKNSITDLQQ 121 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 R N+ D PD +++ L+ A I+L S + LH RGYR G AP+KE LA+ + Sbjct: 122 AVWNKRSNISLDNPDFIIHLHLNNNKAIISLQSSLESLHKRGYRPAVGNAPLKENLASGL 181 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + + W PL+D MCGSGT LIEA + + + + F W + I+ K Sbjct: 182 INMTKWNGKVPLIDFMCGSGTFLIEAVNQILEVPINIDQ-VYLFENWLDFRKDIYLSEKN 240 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 +A+ + E G + + +V ++A N LAG+ I D +L Sbjct: 241 KAKYKIIN--YEKLPTIIGCEINKKVFEQANINISLAGLESYIEIINNDFLELQL---SC 295 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 G ++ NPPYG++L + LI L+ +G +KN F GW L S +P L L++++ Sbjct: 296 KPGIIICNPPYGKKLGDQNELICLYEQMGIFLKNNFSGWEFWLLSGNPKLTKYLKMKSSV 355 Query: 362 QYKAKNGPLDCVQKNY 377 + NG +DC Y Sbjct: 356 KIPVSNGGIDCRWIQY 371 >UniRef50_D1VVQ9 Protein YpsC n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVQ9_9FIRM Length = 378 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 117/382 (30%), Positives = 182/382 (47%), Gaps = 10/382 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 + A+T GLE L K EL ++G + +V G + G + V + R A RI + + Sbjct: 4 FKIIATTNFGLEALCKRELLDMGYNDLKVQDGRIELTGTYKDVCALNLNLRTAERIFMVV 63 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 + S +L+ V I+WT N + F + + + + AI+ Sbjct: 64 ASFEALSFEELFDKVYNIDWTYFLNEDSNFILLAKSHKSKLFSLSDIQRISEKAIIKKLQ 123 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 K + + I++ V L + A+IA+D SGDGLH RGYR API ET+AA++ Sbjct: 124 NKY-KKDWFSKSNERIKIEVSLLDDIATIAIDTSGDGLHKRGYRQINYKAPISETIAASM 182 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 VM S W P PL DP CGSGT++IEAAM+ + APGL R + + + I++E K Sbjct: 183 VMLSFWNPERPLADPFCGSGTIVIEAAMIGKNIAPGLMRK-FDLENFIFIPQEIFKEEKR 241 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 + + + + SD + I+ A+ N+ + G+ E I F KD+ L + Sbjct: 242 KCYEKID---YDKKLNINASDVSYKAIEVAKNNSAILGLDEDINFFQKDIRNLDL---ED 295 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 YG +++NPPYGERL + A L+ LGR+ K W+L + S +AD+ Sbjct: 296 NYGVLITNPPYGERLAVKEA-PELNRELGRLYKTI-PTWSLYAITGSETFQKDFGKKADR 353 Query: 362 QYKAKNGPLDCVQKNYHVAEST 383 + K NG + Y+ Sbjct: 354 KRKLYNGKIKTYYFQYYGPRPF 375 Score = 43.4 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 9/108 (8%) Query: 568 DMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMED 627 D+S +E A+ N + GL Q D + + + ++ +PP +++ Sbjct: 259 DVSYKAIEVAKNNSAILGLDED-INFFQKDIRNL--DLEDNYGVLITNPPYGERL-AVKE 314 Query: 628 AFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKA 675 A ++ R+ L K + ++ F+ D A K Sbjct: 315 APELNRELGRLYKTIPTW-----SLYAITGSETFQKDFGKKADRKRKL 357 >UniRef50_Q1NS64 Putative RNA methylase:THUMP n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NS64_9DELT Length = 382 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 117/356 (32%), Positives = 178/356 (50%), Gaps = 8/356 (2%) Query: 26 VECQVVQGGVHFKG-DTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEM 84 GV+F + + +Y+ + +RL SRI+ PL +S LY I W + Sbjct: 34 TRLNQTHRGVYFSAAEHQTLYRIVYQTRLCSRILAPLLHFDCHSSKYLYRTAGTIPWERL 93 Query: 85 FNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLH 144 NP +F ++ I +SQY A+++KDAIVD F +++ RP +D+ PD+ +++ + Sbjct: 94 LNPEQSFMINARVSGSRISHSQYAALRLKDAIVDYFQQRSGRRPGIDKHQPDLVIDLHIR 153 Query: 145 KETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLL 204 + A I+LDL+G LH RGYR + API+ETLAAA++ +GW L+DP CGSGTLL Sbjct: 154 RNRAVISLDLAGGSLHRRGYRQESVEAPIQETLAAAMIDFAGWDGAKKLVDPCCGSGTLL 213 Query: 205 IEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSD 264 EA M + G R +G + WQ+ K EA+ R +A GSD Sbjct: 214 AEALMRQSMIPAGYLRNHFGLQQLPDFEPESWQQSKEEAK---RGIIAPPPGLLAGSDLS 270 Query: 265 ARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIA 324 + I+ AR N L G+ +T +V + +L +++NPPYG RL + A A Sbjct: 271 KKAIRAARRNLALLPHGDRVTLKVCPLQELAPL----NKAVIVANPPYGVRLGDKAAAAA 326 Query: 325 LHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVA 380 L LG +K+ G L+ LL + L+ + NG L+ V Y + Sbjct: 327 LIGELGSFLKHHCTGSTACLYFGDRQLLKAIGLKPSAKKNLNNGGLEGVLARYELY 382 >UniRef50_B8JAH2 Putative RNA methylase n=5 Tax=Myxococcales RepID=B8JAH2_ANAD2 Length = 387 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 123/395 (31%), Positives = 186/395 (47%), Gaps = 26/395 (6%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 FA+ A+G E L+ EL L + +GGV F+G ++ + +R A R++L L Sbjct: 2 RFFATCAKGTEGALRRELSGLRLPAVRGDRGGVSFEGALEAGMRACLHARTAMRVLLELA 61 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 LY G +A+ W + + T AV + + TI +S + A+KVKDA VD Sbjct: 62 RFPAPDAAALYEGARAVAWQDWLDVRTTLAVEATVSSTTITHSGFAALKVKDAAVDVLRE 121 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 + RP+VD PD+R+ + L ++ A+++LDL+G LH RGYR AP+KETLAAA++ Sbjct: 122 RLGARPDVDPKDPDVRIVLHLARDEATLSLDLAGAPLHRRGYRAVTTEAPLKETLAAAVL 181 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQH---DEAIWQEV 239 + G P P DPM GSGTL IE A+ A APGL R +GF W + ++ W + Sbjct: 182 LLGGVDPALPFADPMAGSGTLAIEHALRARRIAPGLDR-AFGFQRWPSYRGGPQSAWDRM 240 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 KA A+ L + D + IQ R NA AG+ + D L Sbjct: 241 KAAARAEI---LPRAPAPIVARDGHPKAIQALRLNAAAAGVEADLEISQADARDLQP--- 294 Query: 300 KGPYGTVLSNPPY--------------GERLDSEPALIALHSLLGRIMKNQFGGWNLSLF 345 G +++NPPY R+ + L + L ++ GW + Sbjct: 295 SADAGAIVTNPPYGERLGGGGEGASAAEARVAGK-KLQGFYRGLAEMLVRH-HGWTAVVL 352 Query: 346 SASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVA 380 S +P L + +R ++ NGPL+ Y + Sbjct: 353 SGNPLLERAIPIRPAVDHRLWNGPLEAHLLKYELP 387 >UniRef50_B0S0R6 Methyltransferase n=2 Tax=Finegoldia magna RepID=B0S0R6_FINM2 Length = 373 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 109/381 (28%), Positives = 173/381 (45%), Gaps = 9/381 (2%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 + + A GLE L+K +L ++G V G + +GD + + + + R A R+++ LG Sbjct: 2 KIIVTCAFGLESLVKRQLLDMGYENLNVNDGRIILEGDEKDIAKLNINLRCADRVLIELG 61 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 K S L+ GV+ INW E+ + F V + + + + AI+ + + Sbjct: 62 NFKAVSFEQLFKGVEKINWLEILEADSNFIVEGRSYKSKLFSIKDCQSITEKAIIKSLQK 121 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIV 182 K + R+ V L K+ SI LD SGDGLH RGYR+ + +API+E LAA I+ Sbjct: 122 KY-KVDWFSKSKGRFRIEVSLVKDICSITLDTSGDGLHKRGYREESVLAPIRENLAAGII 180 Query: 183 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 242 S PL+D CGSGT IEAA + APG+ R + F + +++ + + Sbjct: 181 DLSFANSDRPLVDLFCGSGTFAIEAARKFRNIAPGIDRK-FDFINFNDKFNDAYKQERTK 239 Query: 243 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGP 302 A + + SD D I++A NA AG+ E I F +D + + Sbjct: 240 ALESID---YDKKIDIFASDVDGSAIEKAIANAENAGVREDIRFVTRDFRNV---VLNDN 293 Query: 303 YGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQ 362 Y ++SNPPYG+RL ++ LG M +F + + + D ++ K Sbjct: 294 YFVLISNPPYGKRLGERQEAEKIYKDLGIKM-AKFKTASQYIITDCEDFEKFYGKKSSKN 352 Query: 363 YKAKNGPLDCVQKNYHVAEST 383 K NG + C Y Sbjct: 353 RKMYNGNMKCYLYQYFGPRPK 373 >UniRef50_B8FK67 Putative RNA methylase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FK67_DESAA Length = 392 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 99/383 (25%), Positives = 170/383 (44%), Gaps = 6/383 (1%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 ++ F T+ GLE++ ++ +LG +GGV F+G +Y++ + LA+R+++ + Sbjct: 15 HTFFIPTSLGLEKICAKQVRSLGLEASASGEGGVTFQGKLTDMYKACLHLSLANRVLMRI 74 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 E K L V+ I W + + +SQ A +V+ AI+ Sbjct: 75 HEFKAAHFAALENAVEGIPWELYLPLSCPINFRVTARKSKLYHSQAIAERVEKAILQHL- 133 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 K R + + V + ++++D G+ LH RG+++ G API+ETLAAAI Sbjct: 134 EKYGERVEGAEEPAPQEIFVRAVSDRFTLSIDACGELLHKRGFKESEGRAPIRETLAAAI 193 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + +G+ PL+DPMCGSG EAA++A + PG +R + F W + W +++ Sbjct: 194 LEFAGYDGTLPLMDPMCGSGAFSTEAALIAANIPPGWNRD-FAFFSWPAFKKQQWLYLRS 252 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 +A+ + + + SD D G+ ++ +D+ +LT P Sbjct: 253 QAEKQFKNI---TQPLVFASDIDQNACSLLLETLESQGLDRIVKVSNEDILRLTPPKQVS 309 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 G ++ NPPYG RL + P L + L + +QF GW L+ D L A Sbjct: 310 NPGLIVVNPPYGLRLGTVPQARELFASLCNRLADQFQGWTLAALVPHKDWTPLLPFSAQP 369 Query: 362 -QYKAKNGPLDCVQKNYHVAEST 383 Q +G L + Sbjct: 370 FQKILHHGGLKIPLLIGKITNKK 392 >UniRef50_C2BEE4 Site-specific DNA-methyltransferase (Adenine-specific) n=2 Tax=Anaerococcus RepID=C2BEE4_9FIRM Length = 373 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 108/383 (28%), Positives = 178/383 (46%), Gaps = 10/383 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M + ST+ GLE L+K +L++LG + +V G + +GD + + + R A R+ L Sbjct: 1 MEKILISTSFGLESLVKFQLKDLGYKDFKVSDGLISLEGDLSDLAKLNINLRHADRVYLE 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L K +L+ V+ I+W ++ N + F V+ + + + + AI+D Sbjct: 61 LASFKAMDFEELFENVKKISWQDILNEDSNFIVNARTYKSKLFSLRSIQSISEKAIIDKL 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + ++ A + + + + + LD SG+GLH RGYR+ + AP++E LAAA Sbjct: 121 K-VYYKKSFFEKKAERVNIEIMIENNLVRVCLDTSGEGLHKRGYRENSVKAPLRENLAAA 179 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +V S + P L D CGSGT+LIEAA +A + APG+ R + F+ + + +++ K Sbjct: 180 LVDLSFYNPDRFLFDGFCGSGTILIEAARIARNIAPGIDRD-FDFTSFKFINPKFFKDAK 238 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 EA + + GSD R I A+ NA AG+ E I+F +D + Sbjct: 239 KEAMDKID---YSKKLNILGSDISGRAISLAKQNAINAGVEEDISFITRDFGSV---AIS 292 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 YG +SNPPYG RL S+ L ++ + + W+L +A + Sbjct: 293 NDYGVFISNPPYGLRL-SDTDLSEIYKKINHKL-AGLDTWSLYFITADDKFDRQFKRVLS 350 Query: 361 KQYKAKNGPLDCVQKNYHVAEST 383 K+ K NG Y Sbjct: 351 KKRKLYNGGQKVDFYQYFGKRPE 373 >UniRef50_B8LLK7 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LLK7_PICSI Length = 532 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 119/442 (26%), Positives = 190/442 (42%), Gaps = 50/442 (11%) Query: 3 SLFASTARGLEELLKTELEN--LGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 FA+ A GLE+++ EL + +GA + GGV+F+G Y + +W R R++L Sbjct: 94 KFFATCAPGLEQVVAAELGSPLIGATGIKEGSGGVYFQGTLSTGYSANLWLRCGIRVLLE 153 Query: 61 L--GECKVYSDLDLYLGVQ-AINWTEMFNPGA------------TFAVHFSGLNDT-IRN 104 L E +Y V+ A++W + TFAV + T + N Sbjct: 154 LSYAEMPKKDRDCVYNFVRNAVDWPQYLASSTLKKSGYKRWKFRTFAVQSRVWDCTQVTN 213 Query: 105 SQYGAMKVKDAIVDAFTRKNL-PRPNVDRDA---PDIRVNVWLHKETASIALDLSGDGLH 160 S +++ KDAI D+ RP+ + D+ + + L+++ A + D+SG LH Sbjct: 214 SMSASIRTKDAICDSIRDACNNKRPDPPEEGGAKADVPLFLSLYRDKAVLYKDMSGVSLH 273 Query: 161 LRGYRDRAGIAPIKETLAAAIVMRSGWQ------------------PGTPLLDPMCGSGT 202 RGYRD A + E +AA I+ +GW LLDPMCGSGT Sbjct: 274 RRGYRDVMHRASLSEAVAAGILTLAGWNTRVQGLGVANKNGGLESLENMVLLDPMCGSGT 333 Query: 203 LLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSD 262 LIEAA++A +RAPGL R W F W D W+E A + A G+D Sbjct: 334 FLIEAALMAANRAPGLTRKTWPFKSWHDFDSVSWKECWQNASSAATPI--PPGLRLLGND 391 Query: 263 SDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPA- 321 + +A AG+ E++ KD + V+ NPP+G RL +E Sbjct: 392 KHEGALSLCARDAEAAGVKEVLELSCKDCRDYSP---SVTPTLVVVNPPWGFRLGNEGEN 448 Query: 322 ----LIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNY 377 + + LG+ K ++ + S L+++ADK++ G ++C +Y Sbjct: 449 DHEGVESTWEALGQFSKQHCNNADMYILSGKSTATRELRMKADKKWPITMGGVECRLLHY 508 Query: 378 HVAESTPDSKPAMVAEDYTNRL 399 +V S + + + Sbjct: 509 YVLPSKVGTTTDCARISKKHSI 530 >UniRef50_Q3A2B2 Predicted N6-adenine-specific DNA methylase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2B2_PELCD Length = 369 Score = 366 bits (941), Expect = 1e-99, Method: Composition-based stats. Identities = 113/377 (29%), Positives = 168/377 (44%), Gaps = 14/377 (3%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + LFA TA GLE + EL++LG QV +GGV F G +Y++ +W R ASR+++ Sbjct: 5 IFELFAVTALGLESVCARELKDLGIKS-QVCKGGVAFYGGLEQLYKANLWLRTASRVLVR 63 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 LG DLY + W P + S ++++ V+ A A Sbjct: 64 LGSFGCKDFPDLYQKALRLPWGRFVKPDTDLQIKASSSRSRLQHTGRIVETVESAAHRAL 123 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 R + V +++D SG LH RGYR G AP++ETLAA Sbjct: 124 -----GRATDSGAGLRQLILVRFEDNRCVVSVDSSGPLLHRRGYRHMVGAAPLRETLAAG 178 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 I+M W TPL+DPMCGSGT ++E A++ RAPG R + F W ++ +W ++ Sbjct: 179 ILMLLDWDARTPLVDPMCGSGTFVVEGALMGMRRAPGTAR-EFAFMQWPRYRPGLWHVLQ 237 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 +A++ + L G D D VI A NA AG+ + F ++ + P Sbjct: 238 TQARSAEQSCL----PPLLGYDRDPDVIDAAAGNASRAGVAAVTQFGKAELGEGRFP--- 290 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G ++ NPPYG RL + L L+ LG ++ G W ++ L L D Sbjct: 291 ERPGFIMCNPPYGGRLGRDVRLTGLYRRLGEFYRSSGGVWQGAVLCPVGPLAKSLGEGFD 350 Query: 361 KQYKAKNGPLDCVQKNY 377 NG +D Sbjct: 351 CIGLLNNGGIDVGLYKV 367 >UniRef50_A4SVE4 Putative RNA methylase n=2 Tax=Polynucleobacter necessarius RepID=A4SVE4_POLSQ Length = 485 Score = 363 bits (932), Expect = 1e-98, Method: Composition-based stats. Identities = 122/476 (25%), Positives = 180/476 (37%), Gaps = 96/476 (20%) Query: 3 SLFASTARGLEELLKTEL---------ENLGAVECQVVQ----GGVHFKGDTRLVYQSLM 49 F GLE L EL + LGA GGV G + Sbjct: 2 RFFVVCPGGLEVPLAQELAEIAQRPDSKALGAWVIDPTPTSPTGGVGLAGPLSAAMALNL 61 Query: 50 WSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGA 109 SR+ASR++L + + + DLY + W + F T V + +++ + Sbjct: 62 HSRIASRVLLQMAQAPYRQEEDLYKLASGLAWEDWFTSKQTLRVDVTAHRSPLKSLNFAT 121 Query: 110 MKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAG 169 +K+KDAIVD RP++D PD+RV L +I LD SG+ L RG+RD G Sbjct: 122 LKIKDAIVDRLRDVTGDRPSIDTAFPDVRVQAHLTATQVTIYLDTSGEALFKRGWRDEKG 181 Query: 170 IAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHR--------- 220 AP+KE LAA I+ +GW+ G L DPMCGSGT LIEAA PG R Sbjct: 182 DAPLKENLAAGILSITGWKSGEILFDPMCGSGTFLIEAAQKTLAIPPGAIRAGMYGDDAK 241 Query: 221 -------------GRWGFSGWAQHDE----AIWQEVKA----EAQTRARKGLAEYSSHFY 259 +GF +E W +K E + ++ + S Sbjct: 242 PSRLAYRPLVTSVHGFGFQRLKPFNEVAEQKRWAALKEGSLNEILAQRKQYPSAESLRIS 301 Query: 260 GSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERL--- 316 G D + +++ + N + A + E D P+ G +L NPPYGERL Sbjct: 302 GGDINEKLVAMFKGNWQRAQLPEQPVVRQIDALASRPPVNSDS-GVMLLNPPYGERLVIK 360 Query: 317 -------------------------------------------------DSEPALIALHS 327 + +P + Sbjct: 361 GGRGQDRNAQESYDESEEPENRFELNLETGRQSAKRSSRESLKKLQAQEEQDPKFVEFLR 420 Query: 328 LLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAEST 383 G+ +K FGGWN+ + +A L L+++ K+ NGPL+C + + Sbjct: 421 QFGQHLKEAFGGWNIFVLTADMALPGQLRIKESKRTPLFNGPLECRLFKFEMHAKR 476 >UniRef50_C7I387 Putative RNA methylase n=1 Tax=Thiomonas intermedia K12 RepID=C7I387_THIIN Length = 416 Score = 363 bits (931), Expect = 2e-98, Method: Composition-based stats. Identities = 119/389 (30%), Positives = 183/389 (47%), Gaps = 15/389 (3%) Query: 2 NSLFASTARGLEELLKTELENLG-----AVECQVVQGGVHFKGDTRLVYQSLMWSRLASR 56 F RG+E L E++ L GG+ +G + + RL SR Sbjct: 25 FDFFLPCPRGVEAALADEVKALAEHSPTLRAGTPTPGGLPVQGSLTDAMRLNLHCRLPSR 84 Query: 57 IMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAI 116 ++L G C D+Y + + W + F+ V + + + ++ A++VKD I Sbjct: 85 VLLLGGSCSYADAEDIYHLARDLAWEKWFDVTQALRVDVTAERSPLASIKFAALRVKDGI 144 Query: 117 VDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKET 176 D F RP+VD PD+R+++ L + A + LD SG+ L RG+R G AP+KE Sbjct: 145 CDRFRALTGERPDVDTAHPDVRIHLHLREADALLYLDTSGEPLFKRGWRSEHGAAPLKEH 204 Query: 177 LAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 LAA ++ SGW PG L DP+CGSGTL+IEAA +A +RA GL R +GF D W Sbjct: 205 LAAGLLKLSGWTPGDVLFDPLCGSGTLVIEAAQMAANRAAGLARS-FGFEALQGFDMDAW 263 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDV----- 291 ++ +A+ R F+ +D D ++ NAR AG+ I + DV Sbjct: 264 NAMREQARQAVRPL---TPGQFFAADIDPANVRMTLDNARRAGVDGAIAAQAGDVIAAVP 320 Query: 292 AQLTNPLPKGPYGTVLSNPPYGERLD-SEPALIALHSLLGRIMKNQFGGWNLSLFSASPD 350 LP G ++SNPPY ER+ A L R +K +F GW+++L +A Sbjct: 321 PVDAAALPAGQAAWLISNPPYNERIAPEGQAADDFAPQLARTLKQRFAGWHVALLAADLH 380 Query: 351 LLSCLQLRADKQYKAKNGPLDCVQKNYHV 379 L+L+ ++ NG ++C + Sbjct: 381 WDKALRLKPRRRIVLFNGTIECRLMLIDM 409 >UniRef50_B9P9P2 Predicted protein n=14 Tax=cellular organisms RepID=B9P9P2_POPTR Length = 433 Score = 361 bits (927), Expect = 6e-98, Method: Composition-based stats. Identities = 111/322 (34%), Positives = 167/322 (51%), Gaps = 13/322 (4%) Query: 3 SLFASTARGLEELLKTE---LENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIML 59 LF A G+E L E + L + V +GGV +G R + SRLA R+++ Sbjct: 81 HLFLPCAAGVEGFLADEVHAITGLSGHDLMVGRGGVMVRGLWRDALLLNLHSRLAQRVLV 140 Query: 60 PLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDA 119 L + ++ DLY + W F+P +F + + + + + + A++VKDAI D Sbjct: 141 QLSQTLYRNENDLYRAASEVAWEIWFSPRESFKIEVTAQHSPLTSLNFAALRVKDAIADR 200 Query: 120 FTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAA 179 F + RP+V+ PD+RV++ L + A+I +D SG+ L RG+R+ G AP+KETLAA Sbjct: 201 FRDRKGVRPDVETRHPDVRVHLHLTTDEATIYIDTSGEALFKRGWREDKGDAPLKETLAA 260 Query: 180 AIVMRSGWQP----GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAI 235 A++ +GW P PL DP CGSGT+LIEAA +A G+ R R+ F + Sbjct: 261 AMIAATGWDPHGDDPQPLYDPCCGSGTVLIEAAQIARRIPAGILR-RFAFEKLVPFQRHV 319 Query: 236 WQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLT 295 W+ + EA+ L + YGSD R++ A+ NA AG+G+ + D Q Sbjct: 320 WEAMLDEAEAAI---LPDSPVAIYGSDVSHRMVDFAQRNAERAGVGQTVQLRGGDALQRM 376 Query: 296 NPLPKGPYGTVLSNPPYGERLD 317 P G +L NPPYGER+ Sbjct: 377 PPC--EQPGLMLLNPPYGERIA 396 >UniRef50_Q1JY11 Putative RNA methylase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY11_DESAC Length = 369 Score = 359 bits (921), Expect = 2e-97, Method: Composition-based stats. Identities = 120/374 (32%), Positives = 171/374 (45%), Gaps = 19/374 (5%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +A A G E + EL++ V + GGV F G R +Y + +WSR ASRI++ LG Sbjct: 7 QFYAIVAPGFESVCADELKSRLQVPVSIEHGGVTFHGKLRELYLANLWSRCASRIVVRLG 66 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + LY + W PG V + + +S + +AI A Sbjct: 67 DFNCRDFPTLYRKAVRLPWGRFLKPGTAIDVRTTCRQSRLNHSGRIGQTISEAIGKALGT 126 Query: 123 KNLPRPNVDRDAP-DIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 P +D P ++ V L + I++D S + LH RGYR + AP++ETLAA Sbjct: 127 -----PVSQQDTPFRQQILVRLDNDHCQISIDSSAERLHRRGYRQQMTPAPLRETLAAGC 181 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 +++ W + LD +CGSGTL IEAAM+A + APG R + F W + +WQ + Sbjct: 182 LLQCHWNGDSDFLDALCGSGTLAIEAAMIAGELAPGRQR-VFAFQHWPGYRGNLWQSLLH 240 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 EA+ + R S SD D + I ARTNA+ AG+ + I FE Q + G Sbjct: 241 EAKHQQRT----PSITITASDQDEQAIHAARTNAKAAGVDQWIHFEQCPYQQQHS---SG 293 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 P G LSNPPYGERL L L F GW+ ++ P L+ Sbjct: 294 PQGLWLSNPPYGERLQQSQTTPQLLQALHAHFDANFSGWHGAMILPHP-----LRGVPAP 348 Query: 362 QYKAKNGPLDCVQK 375 Q + +NG L Sbjct: 349 QLQFRNGGLPVALY 362 >UniRef50_B1XYJ5 Putative RNA methylase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XYJ5_LEPCP Length = 440 Score = 358 bits (918), Expect = 5e-97, Method: Composition-based stats. Identities = 120/431 (27%), Positives = 191/431 (44%), Gaps = 51/431 (11%) Query: 3 SLFASTARGLEELLKTELENL--------GAVECQVVQGGVHFKGDTRLVYQSLMWSRLA 54 L+ A G+E LL E+ + A Q + GV G + + RLA Sbjct: 10 PLYLPCAAGVEPLLADEVRAILRAAGAEKAAESVQPGRAGVSLIGSPASAMRLHLECRLA 69 Query: 55 SRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKD 114 R++ + E + + DLY +++ W + P + V + + + + + ++++KD Sbjct: 70 QRVLWQVAEGPYHDEHDLYDLARSVAWGDWITPRQSLRVDTTAVRSPLHSLHFASLRIKD 129 Query: 115 AIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIK 174 A+ DA + RP+VD PD+ + + L A++++DLSG+ L RG+R+ G AP+K Sbjct: 130 AVCDAMRDSHGERPDVDPRHPDLPLVLHLSDTHATLSIDLSGEALFKRGWREVQGEAPLK 189 Query: 175 ETLAAAIVMRSGWQPGT---PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQH 231 ETLAAA++ +GWQ PLLDP CG+GT+ IEAA +A APGL R + F A Sbjct: 190 ETLAAAMLAAAGWQGREADGPLLDPCCGAGTIAIEAAQIACGIAPGLQRT-FAFERLAPF 248 Query: 232 DEA--IWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVK 289 WQ++KAEA+ R + Y D R+ A NA AG+ I F Sbjct: 249 RAEAQAWQQMKAEARARVHA----PAVRIYAGDVSFRMTDFATRNAERAGVLHAIDFRTG 304 Query: 290 DVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALI-------------------------- 323 D Q P G ++ NPPYGER+D++ + Sbjct: 305 DALQRPAPTES---GVLMLNPPYGERIDAKGSGAARARDEAGDRLGPRADAGAREGFEGG 361 Query: 324 ----ALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHV 379 A S L K + GW + S L ++L+ ++ NGP++C + + Sbjct: 362 GTSGAFFSALAAHWKRNYSGWTAWVLSPDAKLPQAMRLKESRRVPMWNGPIECRLFRFDL 421 Query: 380 AESTPDSKPAM 390 + Sbjct: 422 VAGSMRGPRND 432 >UniRef50_C7PKB2 Putative RNA methylase n=2 Tax=Sphingobacteriales RepID=C7PKB2_CHIPD Length = 398 Score = 357 bits (916), Expect = 9e-97, Method: Composition-based stats. Identities = 111/392 (28%), Positives = 185/392 (47%), Gaps = 5/392 (1%) Query: 6 ASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECK 65 + + L+ E++ LG + + GV K + + R AS+++ L + Sbjct: 12 ITCHKRNALYLEQEIKELGFEQTETFVTGVRLKATVNECIRLNLNLRCASQVLYSLQSFE 71 Query: 66 VYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNL 125 + D+Y + W ++ G F++ + N++I NS Y ++VKDAI+D K Sbjct: 72 AGNADDVYNNIHQYPWEDILPDGGYFSITSNVSNESINNSMYANLRVKDAIIDRIREKTG 131 Query: 126 PRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRS 185 RP+ ++++ E A I +D SGD L GYR +G A + E+LAAA + S Sbjct: 132 KRPSTGAALTGAVIHLFWKDEHAEIFVDTSGDSLARHGYRAISGPAQMLESLAAATIYAS 191 Query: 186 GWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQT 245 W +P ++ MCGSGT+ IEAAM+AT+R PGL + F +D ++Q+ A + Sbjct: 192 RWDRVSPFVNVMCGSGTVAIEAAMIATNRRPGLFITNYAFMHLKGYDIQVYQQEDARLEE 251 Query: 246 RARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGT 305 + ++ +D A+ I+ AR NA AG+G+LI F V D +P G G Sbjct: 252 QIKEI---PGLRIIATDHSAKAIESARKNAIAAGVGKLIEFAVCDFTA--TKVPPGVPGV 306 Query: 306 VLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKA 365 NP Y ER + L +S +G MK + GG+ +F+ + +L + L+A ++ + Sbjct: 307 FYVNPEYDERANEIMVLEETYSRIGDFMKQKCGGYFGYVFTGNLELAKKIGLKAKRRIEF 366 Query: 366 KNGPLDCVQKNYHVAESTPDSKPAMVAEDYTN 397 + +DC Y + T T Sbjct: 367 YSSTIDCRLLEYELYSGTRTEPKVTETPPTTA 398 >UniRef50_A3UEM0 Putative uncharacterized protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UEM0_9RHOB Length = 387 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 108/374 (28%), Positives = 173/374 (46%), Gaps = 17/374 (4%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 +F + GLE L +EL G +C+ QGGV KG V+++ + R A+R++ L Sbjct: 23 FDIFLACPPGLESALASELAENGFAKCRPEQGGVTIKGGWAEVWRANLQIRGATRVLAVL 82 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 K L + W E+F+ G V S I + A +V +AI Sbjct: 83 DRFKCQHLNQLEQLARQTPWPELFHAGTPVKVEASCRKSRIYHDGAAAERVANAIARTAL 142 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 RD +I V V + + ++++D SG+ LH RGY+ AP++ET+AA + Sbjct: 143 VAI-------RDDAEITVRVRIDHDVVTLSVDSSGEPLHKRGYKQAVAKAPLRETMAALL 195 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + G+ PLLDP+CGSGT +IEAA LA APG RG + F +A D + ++ Sbjct: 196 LREMGYDGRAPLLDPVCGSGTFVIEAAQLAAGLAPGRARG-FAFERFASFDRDAFMALRN 254 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 R A + +G D D ++ A+ NA A + + +TF + L P Sbjct: 255 ------RAPHARSDAPCFGFDRDPGAVRMAKENAERAEVSDRVTFSEGGLKDLKRP--DC 306 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 G V++NPPYG R+ + A+ ++ G +M++QF GW + + + L ++ Sbjct: 307 APGWVVANPPYGARVGDKSAVFGVYKTFGAVMRDQFSGWRAAFITTDEKMAKATGLAFER 366 Query: 362 QY-KAKNGPLDCVQ 374 +G L Sbjct: 367 TSAPIDHGGLKIRL 380 >UniRef50_A4SA02 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4SA02_OSTLU Length = 419 Score = 356 bits (915), Expect = 1e-96, Method: Composition-based stats. Identities = 104/419 (24%), Positives = 183/419 (43%), Gaps = 42/419 (10%) Query: 3 SLFASTARGLEELLKTELEN--LGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 +A+ GLE+++ EL + + A + + + GV F G R+ Y + +W R A R+++ Sbjct: 1 RFYATCHPGLEDVVARELASPMINASDIVIGKSGVSFTGTQRVGYDANVWLRSAVRVLVE 60 Query: 61 LGECK----VYSDLDLYLGVQ-AINWTEMFNPGA-----TFAVHFSGLN-DTIRNSQYGA 109 L V +Y V+ A+ W E+ G F V + I +S Sbjct: 61 LKRGYLDPYVSGTQSVYEFVKHAVPWEEVIPGGERGDGLKFGVETRLWDCSQITSSHAAK 120 Query: 110 MKVKDAIVDAFTRKNLPRPNVDRD--APDIRVNVWLHKETASIALDLSGDGLHLRGYRDR 167 ++VKDA+ DA RP+ + A D+ + V L+++ + D+SG+ LH RGYR+ Sbjct: 121 IRVKDAVCDALVDATGTRPSPPDNYAAADVPLYVTLYRDEIIMYRDMSGESLHRRGYRNA 180 Query: 168 AGIAPIKETLAAAIVMRSGW-------------QPGTPLLDPMCGSGTLLIEAAMLATDR 214 A + E+ AA ++ +GW P L+DPMCGSGT LIE A++A + Sbjct: 181 MHRASLSESAAAGMLSLAGWPDMLEEWQRDPAGSPPPVLIDPMCGSGTFLIEGALMAANV 240 Query: 215 APGLHRGR---WGFSGWAQHDEAIWQEVKAEAQT--RARKGLAEYSSHFYGSDSDARVIQ 269 APGL R + F W H+ ++E A+ + G+D + Sbjct: 241 APGLIRSETIGYAFERWPDHNPRTFEECLENARRIGAETRTAVPTPPVIIGNDIHPGAVT 300 Query: 270 RARTNARLAGIGELITFEVKDVAQLT-------NPLPKGPYGTVLSNPPYGERL--DSEP 320 A + A + +I D + V++NPP+G+R+ Sbjct: 301 LAGQGSETARVAGMIDVFRNDCEMFNITASSAGAKIAPNAPKLVVTNPPWGKRIGAGEPA 360 Query: 321 ALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHV 379 + + LG +K + + + S +P++ +++RA +++ G +DC Y + Sbjct: 361 GRRRVWNSLGVFLKRECPDSSAFVLSGNPEVSRAIRMRASRKHVVGIGGVDCRLLRYDI 419 >UniRef50_B7QQX4 RNA methylase family protein n=35 Tax=Rhodobacterales RepID=B7QQX4_9RHOB Length = 376 Score = 355 bits (912), Expect = 3e-96, Method: Composition-based stats. Identities = 100/379 (26%), Positives = 170/379 (44%), Gaps = 18/379 (4%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 +F + GLE+ L E + LG E + V GGV +G V+++ + R A+R++ + Sbjct: 7 FEIFLTAPPGLEQTLLHEAKELGFAEPKTVPGGVTVQGGWPDVWRANLCLRGAARVLARI 66 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSG-LNDTIRNSQYGAMKVKDAIVDAF 120 G + + L + W+E+ V + I ++ +++ AI + Sbjct: 67 GSFRAFHLAQLDKRARKFPWSEVLRADVPVRVETTTNKKSKIYHAGAATQRIERAITEEL 126 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + I + + + + ++D SG+GLH RG++ G AP++E LAA Sbjct: 127 GAEI-------SAEAGITIKLRIEDNLCTFSVDTSGEGLHKRGHKTAVGKAPMRENLAAL 179 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 + G+ P++DPMCGSGT +IEAA +A PG R + F A D W ++ Sbjct: 180 FLRDCGYTGTEPVVDPMCGSGTFMIEAAEIARGLLPGRSRN-FAFEQLATFDADAWAAMR 238 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP--L 298 + YGSD +A ++ A NA AG+ +L+ + V+ LT P Sbjct: 239 D------VTTTQDTDVWCYGSDRNAGAVEMAAANAERAGVADLVQITQQAVSDLTPPDLG 292 Query: 299 PKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLR 358 G V+ NPPYG R+ ++ L AL++ LG +K++F GW + + ++ L L Sbjct: 293 EGEQPGLVIVNPPYGARIGNKKLLYALYAALGETLKSRFSGWRVGIVTSETSLAKATDLP 352 Query: 359 ADKQY-KAKNGPLDCVQKN 376 +G L Sbjct: 353 FLPYGPPVAHGGLKIRLFK 371 >UniRef50_C7HSK3 Methylase n=3 Tax=Anaerococcus RepID=C7HSK3_9FIRM Length = 376 Score = 351 bits (900), Expect = 7e-95, Method: Composition-based stats. Identities = 105/386 (27%), Positives = 178/386 (46%), Gaps = 10/386 (2%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 M + +T+ G+E L+K +LE +V+ G + G+ + + R A RI L Sbjct: 1 MEKIIITTSFGMESLIKRQLEEENYKNFEVLNGKIILNGNLDDIGYLNLNLREADRIFLE 60 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 + + +L+ ++ I+W + F V+ + + + AI+D+ Sbjct: 61 IEYFTAKTFEELFENIKKIDWFDYLKIDDNFIVNARTYKSKLFSIPSIQSISEKAIIDSL 120 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 RK + ++V + + K+ S+ LD SGDGLH RGYR + API+E LAA Sbjct: 121 KRKY-KISTFKKSGSRVQVEIMIEKDKVSVCLDTSGDGLHKRGYRQGSVKAPIRENLAAG 179 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +V S ++ L D CGSGT+LIEAA + APGL R + F+ + +D+ ++++K Sbjct: 180 LVDLSFYKDDRFLFDGFCGSGTILIEAARKERNIAPGLDRD-FDFTSFKFYDKKRFEKIK 238 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 EA + + GSD + I+ A+ NA AG+ E ITF KD + K Sbjct: 239 KEAYEKID---YRKKINILGSDISKKAIELAKNNALNAGVYEDITFLNKDFKDINL---K 292 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 +G +SNPPYGERL + ++ W++ + S+ ++ ++ + Sbjct: 293 NNFGIFISNPPYGERLSRFDKA-KISKMINEKF-ENLNTWSMFIISSDENIDKNIKRKLS 350 Query: 361 KQYKAKNGPLDCVQKNYHVAESTPDS 386 K+ K NG + + D Sbjct: 351 KKRKLYNGGQKVDLYQFFGKKPKKDR 376 >UniRef50_C0QIM2 Putative N6-adenine-specific DNA methylase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QIM2_DESAH Length = 391 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 95/381 (24%), Positives = 166/381 (43%), Gaps = 10/381 (2%) Query: 2 NSLFASTARGLEELLKTELENLGAV--ECQVVQGGVHFKGDTRLVYQSLMWSRLASRIML 59 + FAST GL+++L E L + +GGV F G + Y + ++ ASRI + Sbjct: 19 QTFFASTTPGLKQILAAEFAALPLETEHFTMAEGGVVFTGPMKSCYLANLYLGTASRITM 78 Query: 60 PLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDA 119 + E K + L + + W + V + + + +++ + I D Sbjct: 79 EVAEFKAENFRTLEKKLAQVEWELFLKKRSHIHVEATTHHSRLYHTRAIEERAVQIIQDH 138 Query: 120 FTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAA 179 ++ P ++ + + + I+LD SGD LH RG G+AP++ TLA Sbjct: 139 L---DMAAPESPGAPASYKILIRVRDDRFFISLDTSGDLLHKRGLTSAVGMAPLRSTLAR 195 Query: 180 AIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 +I++R+G+ PL+DPMCGSG+ L+E AM+A+ PG +R ++ F + +A W + Sbjct: 196 SILIRTGFSGREPLMDPMCGSGSFLVEGAMMASQIPPGFYR-QFAFEHFPCFSQAQWNHL 254 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 K A+ R + +G D +I G L+ + +D L Sbjct: 255 KKTAEKNFRNVE---TPLIFGFDQAGNLIAGLEQTLSDHGFSGLVQVDKQDFFDLGPKDF 311 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRA 359 G V+ NPPYG+RL + + +G + F GW + + P+L L A Sbjct: 312 TDQAGVVVLNPPYGKRLGEKGETAEFYKRIGDKLARNFQGWRVGILLPEPELARELPF-A 370 Query: 360 DKQYKAKNGPLDCVQKNYHVA 380 + + +G L+ + Sbjct: 371 VELHPLFHGGLEIHVATGKIH 391 >UniRef50_A8SGD5 Putative uncharacterized protein n=3 Tax=Ruminococcaceae RepID=A8SGD5_9FIRM Length = 439 Score = 348 bits (892), Expect = 6e-94, Method: Composition-based stats. Identities = 127/398 (31%), Positives = 179/398 (44%), Gaps = 12/398 (3%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 L A G E K EL +GA +V G + F G ++ + + R R+ML L Sbjct: 46 FELIAPCFFGCESTAKFELTRIGAENIRVEDGRLSFCGGAEMIAAANLNLRTVERVMLLL 105 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 K + +L+ GV +I W E A F V S LN + + +K A+V Sbjct: 106 ARYKATTFDELFDGVYSIPWEEFLPADAAFPVTGSSLNSQLTSIPACQSVIKKAVVKRLM 165 Query: 122 RKNLPRPNV-DRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 + R V + +V L K I LD +G+GLH RGYR A AP++ETLAA Sbjct: 166 K--GHRTTVLPESGVEYKVRFMLRKNVCEIMLDTTGEGLHKRGYRRNAMEAPLRETLAAT 223 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 I + + + DP CGSGTLLIEAA A + APGL R R+ ++ A+W E + Sbjct: 224 IADLGRVRRDSLVEDPFCGSGTLLIEAAQKAMNIAPGLKR-RFAAERYSFVPAALWAEQR 282 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 +A ++ + +G D D + +A NA+LAG+ FEV DVA Sbjct: 283 QKALAESKL---DVGFEAFGYDIDPAAVAQANVNAKLAGVENRCHFEVADVATFAA---- 335 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 P VL+NPPYGERL + L LG+ M+ L +A D RA+ Sbjct: 336 KPEAIVLTNPPYGERLGTIEGAAKLARTLGQQMEAS-PCAGLYAITADMDFELHYGKRAN 394 Query: 361 KQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNR 398 K+ K NG + C Y+ A T M + + Sbjct: 395 KRRKMYNGMIPCQLYMYYNAPKTEKMAKPMPKSGFDGK 432 >UniRef50_A5GQS8 Predicted N6-adenine-specific DNA methylase n=21 Tax=cellular organisms RepID=A5GQS8_SYNR3 Length = 398 Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats. Identities = 119/375 (31%), Positives = 181/375 (48%), Gaps = 20/375 (5%) Query: 23 LGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQ-AINW 81 GA Q ++ V + D Y++ + +RL +++ L S LY GVQ A +W Sbjct: 27 FGAQSLQTLRRAVRCRLDRAGFYRAHLQARLPFQLLRLLASFPCSSRAQLYGGVQQAADW 86 Query: 82 TEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNV 141 P +F V SG + +S + A++VK+A+VD + + R +VD + PD ++ Sbjct: 87 QGWLPPQLSFRVEASGRAGELNHSHFTALEVKNALVDWQRQHSGQRSDVDLEDPDRVFHL 146 Query: 142 WLHKET----ASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPM 197 L + AS+ + S LH RGYR G+AP+KE LAA ++ +GW PL+DP Sbjct: 147 HLGQGRQGPMASLYVAGSSSSLHRRGYRAAMGLAPLKENLAAGLMAITGWDGSVPLVDPF 206 Query: 198 CGSGTLLIEAAMLATDRAPGLH------------RGRWGFSGWAQHDEAIWQEVKAEAQT 245 CGS TLLIEA R PGL R+ W D +W+ + Sbjct: 207 CGSATLLIEAVSRVLQRPPGLLPGAALEPAHHAQARRFSCLQWPDADLGLWRSEVVASAE 266 Query: 246 RARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGT 305 +A G + + G + D V+++AR+N AG+ I D +L P G Sbjct: 267 QALAGSQQPLAPVIGLEKDPEVLEQARSNVAAAGLEAWIDLRPGDGCELMPPP---GPGV 323 Query: 306 VLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKA 365 ++ NPPYGERL E AL AL+ GR +K+ GW+L L S + L L ++A ++ Sbjct: 324 LVCNPPYGERLGDEQALDALYHRFGRQLKDHCSGWSLWLLSGNAKLTRALGMKASRRVPV 383 Query: 366 KNGPLDCVQKNYHVA 380 NG +DC +Y + Sbjct: 384 SNGGIDCRWLHYEIR 398 >UniRef50_A0LJ49 Putative RNA methylase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LJ49_SYNFM Length = 411 Score = 338 bits (868), Expect = 3e-91, Method: Composition-based stats. Identities = 109/392 (27%), Positives = 169/392 (43%), Gaps = 19/392 (4%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 ++ A T L L + E E G + GV F G+ Y++ +W R ASRI+ Sbjct: 27 VHRFAAVTPPELAALCRQEAEMAGFDVTGLSDAGVEFTGNFGACYEANLWLRTASRILCR 86 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L + +L+ V I W N V + I + V D + F Sbjct: 87 LPAFRAGVREELFGKVSGIPWELWLNRSVPVRVETHVEHSRINHEGMVLETVLDGLRRRF 146 Query: 121 TRKNLPRP------------NVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRA 168 K + P D ++ R+ V L + ++LD +GD LH RGYR R Sbjct: 147 REKGIVPPPEWDRSRGQPGSESDENSRKQRILVRLVRNHCELSLDTTGDHLHRRGYRMRH 206 Query: 169 GIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGW 228 API+ETLAAAI+M++GW TPL+D MCG+GT +EAA+LA PGL R + F W Sbjct: 207 AGAPIRETLAAAILMKAGWNGNTPLVDGMCGAGTAAVEAALLARRMPPGLGRS-FLFQSW 265 Query: 229 AQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEV 288 + E W+ + +A+ + ++ D D R + AR NAR A + I + Sbjct: 266 PSYREKTWEFLLRKAREKMSA---HPAAPIVALDRDPRALAVARENARKAHTEKEIIWRE 322 Query: 289 KDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSAS 348 +D G ++ +PPYG+RL H LG ++ + GW +++ Sbjct: 323 EDFFDFQPARMGLSEGLLILDPPYGKRLPGPD--RGFHERLGAHLRRLYTGWRIAVLCPE 380 Query: 349 PDLLSCLQLRADKQYKAKNGPLDCVQKNYHVA 380 + +RA + ++ +G V Sbjct: 381 RGIA-VTGIRAVRYWRIVHGGTSIYVAMARVE 411 Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 26/91 (28%), Gaps = 7/91 (7%) Query: 556 AGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL-REANEQFDLIFI 614 A +D L A N R T + + D + L+ + Sbjct: 284 MSAHPAAPIVALDRDPRALAVARENARKAH-TEKEIIWREEDFFDFQPARMGLSEGLLIL 342 Query: 615 DPPTFSNSKRMEDAFDVQRDHLALMKDLKRL 645 DPP + F H L L+RL Sbjct: 343 DPPYGKRLPGPDRGF-----HERLGAHLRRL 368 >UniRef50_Q1CZM0 RNA methylase family protein n=2 Tax=Cystobacterineae RepID=Q1CZM0_MYXXD Length = 383 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 118/377 (31%), Positives = 177/377 (46%), Gaps = 17/377 (4%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 LF ST GLE L+ E LG + + V GGV +G L + + R ASR++L LG Sbjct: 13 QLFVSTLPGLEPALEAEASALG-WKPRRVDGGVELEGPAGLHQDANLRLRCASRVLLRLG 71 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + L + ++ + +++ + + S + G V A A+ Sbjct: 72 HFRAGDSDTLSDRLAELDLSHVWDGRSPPKLSVSLNRSPV----PGPDVVFSAAAYAWNV 127 Query: 123 KNLPRPNVDRD---APDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAA 179 ++ R + P + + V + + +++ D SGD LH RGYR AP++ETLAA Sbjct: 128 PSVERAGPLDEEGGGPGLTLLVRVDGDAFTVSADTSGDALHRRGYRQEVSRAPLRETLAA 187 Query: 180 AIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 I+ +G+ PL+DPMCGSGT L+EAA +A RAPGL R + F + D W Sbjct: 188 GILRLAGYDGTQPLVDPMCGSGTFLVEAAWMAMRRAPGLLR-AFAFESFPSFDAQAWAGR 246 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 KA A+ A + +G D +A + AR NAR AG+ + E +D L P+ Sbjct: 247 KARAEADALPA---PGAAIHGYDINAGSLGTARRNARRAGV--TLALERQDARTLKAPV- 300 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASP-DLLSCLQLR 358 G V+ NPPYG+R+ L AL+ LG ++ F GW ++ L+ L L Sbjct: 301 -KGPGLVVVNPPYGKRVGEAEDLPALYRALGNTLRQGFAGWRAAVILPDEAALVKALGLT 359 Query: 359 ADKQYKAKNGPLDCVQK 375 + KNG L C Sbjct: 360 GARSLPVKNGGLKCRLL 376 >UniRef50_B0S9B9 N6-adenine-specific DNA methylase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0S9B9_LEPBA Length = 358 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 115/362 (31%), Positives = 180/362 (49%), Gaps = 12/362 (3%) Query: 17 KTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGV 76 + E+ + +GGV F G V Q + ++ ASR+ L L + + Y Sbjct: 2 EQEILSFHLKINNSNRGGVFFSGKKEDVIQFAIHTKFASRVNLQLLHENAQNYDEFYSKA 61 Query: 77 QAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPD 136 + W + PG +F++ D ++NS++ ++KDAI+D + + P + + D Sbjct: 62 IELPWEKYIGPGVSFSIDAE-TKDKLKNSEFSMHRMKDAILDRLRSQKVALPEIQKRMAD 120 Query: 137 IRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDP 196 + + V H + SI L LSGD + RGYR AG AP++E +A A++ S W+ G LLDP Sbjct: 121 VTIVVRSHTDRFSIELSLSGDPVGRRGYRLHAGNAPVREPIAQAMLELSEWKEGDTLLDP 180 Query: 197 MCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSS 256 MCGSGT+LIEAA+ +R G R+ F+ I+Q + RK + Sbjct: 181 MCGSGTILIEAAL--RERLYG-EINRFLFAESP-----IFQILFPTYVFSERKKENPTTP 232 Query: 257 HFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERL 316 H +G D D I+ A+ NA AG+ + I FEV D L N G G +++NPPYG+R+ Sbjct: 233 HLFGFDIDPEAIRIAKENAYEAGVEDFIKFEVGDCLALKNAF--GSKGHLVTNPPYGDRI 290 Query: 317 DSE-PALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQK 375 L ++ GR++KN+FGGW ++ A L L+ +K K+ L Sbjct: 291 GKPMEDLREMYFQFGRVLKNEFGGWKFTVLCADFSLFGKFGLKENKHISLKHANLKAKIV 350 Query: 376 NY 377 +Y Sbjct: 351 DY 352 >UniRef50_C8PM90 RNA methylase family protein n=2 Tax=Treponema RepID=C8PM90_9SPIO Length = 396 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 110/401 (27%), Positives = 167/401 (41%), Gaps = 31/401 (7%) Query: 1 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFK---GDTR--LVYQSLMWSRLAS 55 M A A G E +L EL+ L + G V F D V ++ + R A Sbjct: 1 MLEFLALCAVGAEPILSNELKLLNFKPVNRLPGRVFFTPATADPEVVSVMRANFYLRTAD 60 Query: 56 RIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVH-FSGLNDTIRNSQYGAMKVKD 114 R+ L L E + LY V A++W F+ + V + + V Sbjct: 61 RMYLVLKEFTADNFDTLYDTVAAVDWQRFFSKDSKITVDKVRTFKSKLASEHAVQRAVHK 120 Query: 115 AIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIK 174 A+ + + + + +++ + LDLSG+ LH RGYR G AP++ Sbjct: 121 AVCSSLCSAWKM-DVLPETGREYTIRIYIEHNRVYLLLDLSGEPLHRRGYRLSGGAAPMR 179 Query: 175 ETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEA 234 ETLAA ++ W+ PL D CGSGT+ IEA A + PG+ R + F +A + Sbjct: 180 ETLAAVLLQCMQWKRKLPLHDAFCGSGTIPIEAVWYAYNIPPGIGRS-FAFETFACYSSK 238 Query: 235 IWQEVKAEAQTRARKGLA-EYSSHFYGSDSDARVIQRARTNARLA-----------GIGE 282 +++ E + R + + GSD+D ++ A+TNA A G Sbjct: 239 KDRQLIEEERRRGALNIRTDCLVRVSGSDNDPEAVRLAQTNAERACMLAGKALQRIGKDN 298 Query: 283 LI---TFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGG 339 I F D ++L+ P P+ G +LSNPPYG+RL E I L+ + + F Sbjct: 299 RIPRPEFIQADFSELSAPYPE---GVLLSNPPYGDRLGDEQDAIELYEKM-TAIPQDFQN 354 Query: 340 WNLSLFSASPDLLSCLQLRAD---KQYKAKNGPLDCVQKNY 377 W L + P LRA K+ K+G LD Y Sbjct: 355 WRLGFITDKPAFADIF-LRAGITLKKRPLKSGNLDTCLYYY 394 >UniRef50_C1A5B5 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5B5_GEMAT Length = 406 Score = 330 bits (847), Expect = 9e-89, Method: Composition-based stats. Identities = 110/383 (28%), Positives = 164/383 (42%), Gaps = 17/383 (4%) Query: 5 FASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGEC 64 F A GL L+ E LG +V GV + R ++ WSRLASR+++ L Sbjct: 22 FLIAAPGLAPLIAAECTTLGITPVEVTAAGVAVQVTPRELFTINCWSRLASRVIVRLAHF 81 Query: 65 KVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT--- 121 L + WT + +P + + + +S A +V IV+A Sbjct: 82 DARDFATLEKQAARVPWTRVISPAVPVQLRVTCRKSRLYHSDAVAERVARGIVNAVPNAQ 141 Query: 122 --------RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPI 173 + + DAP + V ++ I+ D SG LH RG+R AP+ Sbjct: 142 ILGAAAKDEDDELSETLAPDAPTQLIVVRFERDHCVISADSSGTLLHRRGWRQAIAKAPL 201 Query: 174 KETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDE 233 +ETLAA ++ W PL+DP GSGT+ IEAA+ APGL R + W D Sbjct: 202 RETLAAVMLAAMPWDGEIPLVDPFAGSGTIGIEAALRVRRIAPGLTRS-FAMEHWPDADA 260 Query: 234 AIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQ 293 ++ V+ AQ + R + D DA I AR NA AG+ +T E +++ Sbjct: 261 SMHAGVRESAQQQVRPSIG---VPIVLRDRDAGAIVAARANAERAGVLADVTIEQGALSE 317 Query: 294 LTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSA-SPDLL 352 T G G +L+NPPYG R+ L L++ LG +++ GW L++ LL Sbjct: 318 -TELAQYGARGLLLTNPPYGHRIGDGADLRGLYARLGDVLRVGGRGWRLAMLMPNDRALL 376 Query: 353 SCLQLRADKQYKAKNGPLDCVQK 375 L+L + NG L Sbjct: 377 GQLRLSVSPLLRTSNGGLPVALL 399 >UniRef50_Q57880 Putative RNA methyltransferase MJ0438 n=5 Tax=Methanocaldococcus RepID=Y438_METJA Length = 381 Score = 329 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 92/358 (25%), Positives = 162/358 (45%), Gaps = 15/358 (4%) Query: 3 SLFASTARGLEELLKTELENLG--AVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + + + GLE++ K E+E+ G E + +G + F GD +L+ + SR R+ + Sbjct: 2 DYYVTLSPGLEKISKNEIESFGGKIKEIRENKGRIFFSGDLKLIPKINYLSRTIERMNIL 61 Query: 61 LGECKVYS--DLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVD 118 L ++ + D+Y V I+WTE +FA+ + S +A++ Sbjct: 62 LHREEIPNIALDDIYKRVYNIDWTEWIKENQSFAIRPLRAGEHNFTSIDIGRVAGEAVIK 121 Query: 119 AFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGD-GLHLRGYRDRAGIAPIKETL 177 ++ R R V+ D PD+ V V + + + +D +GD L RGYR A + T+ Sbjct: 122 SYQRDKNIRLKVNLDEPDVIVRVEVIFDELIVGIDTTGDIALDKRGYRVFNHPAHLNATI 181 Query: 178 AAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHR-GRWGFSGWAQHDEAIW 236 A+++V S W+ LLDPMCGSGT+ IE A++ + PG R ++GF + Sbjct: 182 ASSLVYLSDWKDDEMLLDPMCGSGTIPIEGALMKRNIPPGKFRENKYGFKFIDIFGYELL 241 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 296 ++K E + G D + + + A+ NA+ A + + I F D +L Sbjct: 242 DKIKKEIVE------NKNIYKIIGLDKNQKYLDGAKDNAKNAEVLDTIEFICGDATKLHE 295 Query: 297 PLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGG-WNLSLFSASPDLLS 353 +++NPPYG R+ S+ ++ L+ K G L + +A + Sbjct: 296 KF--NESDVIIANPPYGIRIGSKRSVKKLYDEFLSSAKEIMHGSSRLIVITAEDKMFK 351 Score = 51.8 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 41/115 (35%), Gaps = 7/115 (6%) Query: 563 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNS 622 +D ++ YL+ A+ N + + I D + NE D+I +PP Sbjct: 256 KIIGLDKNQKYLDGAKDNAKNAEVLD-TIEFICGDATKLHEKFNES-DVIIANPPYGIRI 313 Query: 623 KRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQE 677 V++ + + K ++ ++ + D +AK + +E Sbjct: 314 GSKR---SVKKLYDEFLSSAKEIMHGSSRLIVITAEDKMFKD--AIAKNNFEVKE 363 >UniRef50_Q0F3C8 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3C8_9PROT Length = 376 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 117/375 (31%), Positives = 182/375 (48%), Gaps = 14/375 (3%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 N FA T G+E + EL L A E + GGV F + + + +R +R++L L Sbjct: 12 NHFFAITPPGMEAIAAAELAALSAHEINPIAGGVEFTASMDTMMRINLRARCITRVLLRL 71 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 K S +LY + I+W G+ A+ S + +S V DAI D Sbjct: 72 ASFKALSFPELYNKSKRIDWQRYLAEGSAVALRASCHGSRLLHSGRVEQAVFDAIRDGSI 131 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 + D ++ V + K+ +I++D SG+ L RGYR +G+AP++ET+AAAI Sbjct: 132 QVTA-----GEDEGGQQILVRVDKDQCTISIDCSGERLDRRGYRLHSGMAPLRETIAAAI 186 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + WQP LL PMCGSGT IEAA++A +A G + F W E WQ VK Sbjct: 187 LQWIDWQPEEVLLTPMCGSGTFAIEAALMAAKKAAGST-HDFAFLHWPCLKEKRWQRVKE 245 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 +++ + + SD D R++ +AR NA AG+ LI + V D+A+L +P Sbjct: 246 KSEAMV---VGQPKVQILASDLDGRMLAQARQNANDAGVAGLIDYSVLDIAKL---MPTA 299 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 G +L NPPYG R+ E A+++ LG++ + +F GW + + L + + Sbjct: 300 ANGLILVNPPYGGRI--EADARAVYAQLGKLFRERFSGWRMVVVVPDQGCERALAMPVKR 357 Query: 362 QYKAKNGPLDCVQKN 376 + K K+G + Sbjct: 358 RLKVKHGGHWVHVLH 372 >UniRef50_C4FAV8 Putative uncharacterized protein (Fragment) n=2 Tax=Collinsella RepID=C4FAV8_9ACTN Length = 606 Score = 324 bits (831), Expect = 8e-87, Method: Composition-based stats. Identities = 176/574 (30%), Positives = 259/574 (45%), Gaps = 111/574 (19%) Query: 231 HDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKD 290 HD A W+E+ EA RA + +D + AR + AG+ + + F D Sbjct: 1 HDAATWRELLNEADRRAELAKGRV-ARIVATDPSGDAVACARRILKAAGLADRVIFAQPD 59 Query: 291 VAQLTNPLP------KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNL-- 342 + +++ L P G V + +E A+ + +L G Sbjct: 60 LDKISRKLMMSACCGGEPRGFVFLD-------TTETAISKMSRVLDLATSLHAGACGADP 112 Query: 343 ----------SLFSASPDLLSCLQLRADKQYKAKN-------------GPLDCVQKNYHV 379 + L+ L A N G + + N Sbjct: 113 VRAMLSTMPTVALTRDDLLIRALGEPARSLRVMPNNEEAELAVFSAANGAISAGEGNVAA 172 Query: 380 AESTPDSKPA-------------------------MVAEDYTNRLRKNLKKFEKWARQEG 414 +S P +E + RLRK K KWA++EG Sbjct: 173 EDSMPAEDAIESSVAPSPATTLIDLGDGKPCAVLIPESEQFARRLRKVAKLRRKWAQREG 232 Query: 415 IECYRLYDADLPEYNVAVDRY-------ADWVVVQEYAPPKTIDAHKARQRLFDIIAATI 467 + CYR+YDADLP+Y+ A+D Y W+V+ EYA P+ +D A RL DI+ Sbjct: 233 VTCYRVYDADLPDYSAAIDLYEGSATTPGRWLVIAEYAAPREVDPALAEARLLDILTLAP 292 Query: 468 SVLGIAPNKLVLKTRERQKGKNQYQKL------------------------------GEK 497 +L + P+ + K R R +G +QY K G Sbjct: 293 RILQVDPDNVFAKARIRSRGGSQYGKQAGGPNPGKGGKPRGTRGGSASNRPSQGASSGTP 352 Query: 498 GEFLE-----VTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDF-LNLFSYTGS 551 + + E VN DYLDTG+FLDHRI R ++ + ++GK F LNLF+YTG+ Sbjct: 353 SDIRTRRLPLIEEGGLTFAVNFNDYLDTGIFLDHRITRGLVREHARGKRFFLNLFAYTGT 412 Query: 552 ATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW---LREANEQ 608 AT +A G T TVD+S TYL+WAERN+ NG G H ++AD ++W +R+ + Sbjct: 413 ATCYAADAGVEETVTVDLSNTYLDWAERNMEQNGFVGPDHHYVRADVMSWIRDMRQTRNR 472 Query: 609 FDLIFIDPPTFSNSKRM-EDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDG 667 +DLIF DPPTFSNS +M +DVQRDH+ L+ L RLL G +FS N R FR D++ Sbjct: 473 WDLIFCDPPTFSNSSKMGRRTWDVQRDHVELLVGLSRLLSREGEAIFSCNLRTFRPDIEE 532 Query: 668 LAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 LA+ G+ +IT +T+ +DFARN++IH+C+L+ Sbjct: 533 LARAGVVLTDITDETIPEDFARNKKIHHCYLVKR 566 >UniRef50_A8F4G2 Putative RNA methylase n=1 Tax=Thermotoga lettingae TMO RepID=A8F4G2_THELT Length = 355 Score = 324 bits (830), Expect = 9e-87, Method: Composition-based stats. Identities = 91/377 (24%), Positives = 162/377 (42%), Gaps = 25/377 (6%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 L + GLE+ EL+ LG G VHF G + + ++ + A R+M+ + Sbjct: 2 ELVVLCSAGLEKAPCIELKKLGFKIKTTTSGHVHFDGHLIDIPKLNLYLKSADRVMINVT 61 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVH-FSGLNDTIRNSQYGAMKVKDAIVDAFT 121 + + +L+ G + NW E+ + T V N + A VK AI Sbjct: 62 DFPSETFDELFEGTFSANWNELVHKRGTIVVEKVKITNSKLSAKGAVASIVKKAIYSKIK 121 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSG-DGLHLRGYRDRAGIAPIKETLAAA 180 N D + +++ S+ LD +G + L RGYR + AP++ET+AAA Sbjct: 122 SDN------QPDGIIYPMYIYIKNNFVSLMLDTTGKNSLSKRGYRMKTSSAPLRETIAAA 175 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +++ SGW PL+DP CGSGT+ IEAA +A ++ + F W + + + Sbjct: 176 LILISGWDQEVPLIDPFCGSGTIAIEAARIALQM--QNNKRSFSFENWPLF-KDLKPSIV 232 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 + + + G D + ++Q A NA AG+ + + F D +L K Sbjct: 233 NQHECKRTVA--------IGYDKNPDILQVANENAIRAGVKKYVRFHCSDFEKLPIFHEK 284 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 +++NPP+G R+ + + L + ++ F L L + DL + + Sbjct: 285 LH---IVTNPPFGLRM--REGNASFYRKLSK-LRKIFPDARLCLITPREDLQKMISIELQ 338 Query: 361 KQYKAKNGPLDCVQKNY 377 ++++ +N L + Sbjct: 339 RKFRFQNSGLWTWCYIF 355 >UniRef50_A3VSE9 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSE9_9PROT Length = 431 Score = 318 bits (814), Expect = 7e-85, Method: Composition-based stats. Identities = 109/377 (28%), Positives = 185/377 (49%), Gaps = 5/377 (1%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 +F ++ G E++L+ E +LG + V GGV F G V+++ + S +ASR+++ L Sbjct: 53 FEIFLASVPGGEDILRQEALSLGFAHPRAVPGGVRFTGGWSHVWRANLASAVASRVLVRL 112 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDA-F 120 + + L + A +E+ +P V I +S A ++ +A+ Sbjct: 113 AQFEAPDLKRLAHQLAAFPLSEVRSPLGPVRVEAQCAKSKIFHSGAAAQRLIEALDQHGV 172 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA 180 P + P R+ + L + A+++LD +G LH RG + G AP++ETLA+ Sbjct: 173 EAVEGGEPQSPDEVPVPRLMLRLDHDRATLSLDTTGTPLHRRGLKRDVGRAPMRETLASH 232 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 + ++ WQP LLDP CGSGT L+EAA AT + G R R+ F G ++EV Sbjct: 233 FLHQAAWQPEEALLDPFCGSGTFLLEAAGRATGKLAGRGR-RFAFEGLQSFAPDSFEEV- 290 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 A+A + +GSD D I A+ NA A + + + FEV+ ++ + P P Sbjct: 291 AKATAERLAPQKTPALALWGSDLDPTTIAAAKANAARAALADQLHFEVRGISDVAPP-PG 349 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G +L+NPPYGERL AL L++ G++++ +FGGW + + ++ L + +L Sbjct: 350 LAAGLILTNPPYGERLGDPQALRHLYATFGKVLRERFGGWRVGVITSDERLAAATRLPFA 409 Query: 361 KQY-KAKNGPLDCVQKN 376 + +G + Sbjct: 410 APFAPIPHGGMRIRLWM 426 >UniRef50_B7IFP0 Methyltransferase n=1 Tax=Thermosipho africanus TCF52B RepID=B7IFP0_THEAB Length = 344 Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats. Identities = 97/377 (25%), Positives = 161/377 (42%), Gaps = 35/377 (9%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 L + GLE EL+NLG G ++ +GD + + + ++ R A R+ + L Sbjct: 2 KLMITCTAGLEGATALELKNLGYKIVDSQSGRIYIEGDLKDIPRLNLFLRTAERVYIVLV 61 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + +V + +LY + ++NW E + G S N + AI R Sbjct: 62 QDRVETFDELYNVIYSVNWEEFVD-GKVLISDVSVRNSKLSAKGAIVSVCYAAINKKILR 120 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSG-DGLHLRGYRDRAGIAPIKETLAAAI 181 K + + + + LD +G D L RGYR + AP++ET+AAA+ Sbjct: 121 KT---------NNIYPIRLIIKNNILQVLLDTTGKDALSKRGYRLKTSKAPLRETIAAAL 171 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 V+ S W + L+DP CGSGT+LIEAA+ + P R + W+ + W E Sbjct: 172 VLLSRWDKKSSLIDPFCGSGTILIEAALYKENVPPSFLR-YFVSEKWSIL-KDYWPE--- 226 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 RK + +G D D V++ A+ N + A I +I +E D L K Sbjct: 227 ------RKKYKVNVDNLFGFDIDKEVLKVAQENEKRANINGII-YENIDFNNLK----KF 275 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 V++NPPYGERL ++ L + F + + S + +Q +A K Sbjct: 276 ENCWVVTNPPYGERLKNDINFSKLW--------DIFVDSKIYILSPDSNFERLVQKKARK 327 Query: 362 QYKAKNGPLDCVQKNYH 378 + + +N + ++ Sbjct: 328 KIRFQNSGIWVWLYMFY 344 >UniRef50_C7N3A2 Predicted SAM-dependent methyltransferase n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N3A2_SLAHD Length = 657 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 142/322 (44%), Positives = 201/322 (62%), Gaps = 13/322 (4%) Query: 393 EDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD--------WVVVQEY 444 + + RL+K K+ KWA I CYR+YDADLP+++VA+DRY ++V+ EY Sbjct: 314 DQFAARLKKVAKERRKWAEDNQICCYRVYDADLPDFSVAIDRYDGVWKNEGESYLVIAEY 373 Query: 445 APPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVT 504 PK + KA R D++ V+G+ + + KTR +KG QY + + Sbjct: 374 QAPKEVSEEKAAARFADVMTLAPVVMGVPADHVFAKTRRHEKGGGQYTDQQKDSCVVYTD 433 Query: 505 EYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARST 564 E V+L YLDTG+FLDHRI R ++G++++G +FLNLF+YTG+ATVHA LGGA +T Sbjct: 434 ESGCIFEVDLGGYLDTGIFLDHRITRELVGRLAQGTNFLNLFAYTGTATVHAALGGALTT 493 Query: 565 TTVDMSRTYLEWAERNLRLNGL-TGRAHRLIQADCLAWLREA---NEQFDLIFIDPPTFS 620 TTVDMSRTYL WAERN+ LN + HR ++ D L W+ ++DLIF+DPPTFS Sbjct: 494 TTVDMSRTYLGWAERNMELNNISDPTRHRFVRYDALRWIEREIGTGNRYDLIFVDPPTFS 553 Query: 621 NSKRMED-AFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEIT 679 NSK M D + VQRDH+ L+ + LL GG +FS N R F D++ LAK G+ ++IT Sbjct: 554 NSKSMGDTTWSVQRDHVNLLIGVAALLTPGGKAIFSCNLRNFTPDVEALAKEGIVLKDIT 613 Query: 680 QKTLSQDFARNRQIHNCWLITA 701 +T+ DF RN +IH C++++ Sbjct: 614 AQTIPHDFERNPRIHKCYVVSK 635 >UniRef50_Q04TW7 N6-adenine-specific DNA methylase n=4 Tax=Leptospira RepID=Q04TW7_LEPBJ Length = 414 Score = 311 bits (797), Expect = 6e-83, Method: Composition-based stats. Identities = 109/377 (28%), Positives = 175/377 (46%), Gaps = 15/377 (3%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 AS GL LLK E+ G +GGV F+G + + + + ++S I + L Sbjct: 48 FEYHASCPDGLSGLLKEEILEAGLKIISENRGGVFFQGSVSALKEFALSTGISSGISISL 107 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 KV S DLY + ++F P +F + + + +++S+Y K+KDAI D F Sbjct: 108 KYWKVESPEDLYNQAVQFPFEKIFGPEYSFRIDSTTKDS-LKDSRYATYKLKDAIFDRFR 166 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 K P V RD PD+ + H + A ++L L+ L RG+ G AP++E LA+A+ Sbjct: 167 SKGKEPPKVSRDEPDLLFYLRSHSDHAKLSLGLNTRPLQQRGHGRSGGPAPMREILASAL 226 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 V SGW + L DP CGSGT+++EAA+ + G+ + Sbjct: 227 VRYSGWNTRSVLYDPFCGSGTIVVEAALKLL------------YGGYTNYRSLSSSLSFK 274 Query: 242 EAQTRARKGLAEY-SSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 + + Y + SD + ++ AR NA+ AG+ LITF D ++ K Sbjct: 275 KLFGEPILNVKNYSEMKIFASDKNETILNLARQNAKNAGVDHLITFFESDAT-ISENEKK 333 Query: 301 GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD 360 G +++NPPYG R+ ++ ++ G+ +K+ F G L+L LL L+L+ D Sbjct: 334 ISDGFIVTNPPYGVRIGTKEEAKEIYVAWGKKLKDHFTGNILALACGDTSLLGFLKLKKD 393 Query: 361 KQYKAKNGPLDCVQKNY 377 K+ G L Y Sbjct: 394 KEQSLTIGKLKGKLVAY 410 >UniRef50_D1R8Y2 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R8Y2_9CHLA Length = 358 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 119/309 (38%), Positives = 174/309 (56%), Gaps = 7/309 (2%) Query: 397 NRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKAR 456 NR+RKN + KWA++ +C+R+YD ++P+Y + +D Y V ++ + Sbjct: 53 NRIRKNYRHIRKWAKRTNTDCFRIYDREIPQYPLTIDFYDGRFCVHYFSRTREK-EELPA 111 Query: 457 QRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTD 516 + +++ + I P+K+ KTR + K QY+K + EF V EY +NL D Sbjct: 112 ELEVEVVQVLSKIFAINPDKVFWKTRAKHKETRQYEKEDDSREFFSVLEYGVKFRINLLD 171 Query: 517 YLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEW 576 YLDTGLFLDHR R+++ + GK LNLF+YT S +V A GA T +VDMS TY W Sbjct: 172 YLDTGLFLDHRETRQLVAATANGKRLLNLFAYTCSFSVQAAAAGASFTKSVDMSNTYTAW 231 Query: 577 AERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAFDVQR 633 E+N LN + + + +++ADCL +L + E++D+I IDPPT S SK+M+ FDVQ Sbjct: 232 GEKNFLLNKFSLKNNPVVRADCLKFLDQEIRSGEKYDIIVIDPPTISRSKKMDQLFDVQV 291 Query: 634 DHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQI 693 D++ L+ +LL G I FS N R F D G K EI+ KTL DF + +I Sbjct: 292 DYIYLISKSLKLLSPEGVIYFSTNSRKFVFDESNF--AGCKIFEISSKTLPIDF-HDPKI 348 Query: 694 HNCWLITAA 702 H CW I + Sbjct: 349 HRCWKIVKS 357 >UniRef50_B8GQ82 Oxidoreductase n=26 Tax=Proteobacteria RepID=B8GQ82_THISH Length = 321 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 139/317 (43%), Positives = 187/317 (58%), Gaps = 6/317 (1%) Query: 389 AMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPK 448 + NRL KNL+ + KWAR++GIEC+R+YD DLPE+ VA+D YA VQ + Sbjct: 1 MPDPTPFLNRLTKNLRHWSKWARRQGIECFRIYDRDLPEFPVAIDVYAGRPHVQAFETRW 60 Query: 449 TIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNA 508 D + + + I P +L K R RQKG +QY+ G V E Sbjct: 61 EADEATYEAWVDAVRGTVAGLFEIPPAELAFKVRRRQKGTDQYEATGNPPAPFVVHEDGL 120 Query: 509 HLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVD 568 V+L YLDTGLFLDHR+ R ++ + ++ K FLNLF+YTGS TVHA GGA S+ T+D Sbjct: 121 KFEVDLHRYLDTGLFLDHRVTRALVREQARDKRFLNLFAYTGSFTVHAAAGGASSSLTLD 180 Query: 569 MSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRM 625 +S TY +W RNLRLN L HRL + D + WL + E+FDLI +DPP+FSNSK M Sbjct: 181 LSNTYQDWTRRNLRLNDLDRPEHRLERCDVMDWLEHSSKIEERFDLIVMDPPSFSNSKAM 240 Query: 626 EDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQ 685 + DVQRDH ++ LL A G + FSNNKRGF++ D L + ++IT+KT + Sbjct: 241 DTTLDVQRDHPWMINRALSLLTADGVLYFSNNKRGFKLYEDELIP--CELEDITRKTTPE 298 Query: 686 DFARNRQIHNCWLITAA 702 DF R+ H CW+I + Sbjct: 299 DFRRHPP-HRCWVIRRS 314 >UniRef50_A6LJF6 Putative RNA methylase n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LJF6_THEM4 Length = 340 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 86/381 (22%), Positives = 151/381 (39%), Gaps = 47/381 (12%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 ++ + GLE E++N+G + V G ++ KGD + + + R A R+ + L Sbjct: 2 TIVLTCTSGLEAATALEVKNMGYKVLESVSGKIYIKGDLKDIPLLNIHLRSAERVFILLK 61 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + V + + Y + I+W + + + S N + AI Sbjct: 62 KTVVKTFDEFYKAIYEIDWEDFVHGKVYIS-DVSVRNSKLSAKGAIISVAYAAIRKKVK- 119 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGD-GLHLRGYRDRAGIAPIKETLAAAI 181 V + L + + LD +G+ L RGYR + AP++ET+AA++ Sbjct: 120 --------SESNVKFPVRIILKNDVLYVLLDTTGEKALSKRGYRLKTSKAPLRETIAASL 171 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRG----RWGFSGWAQHDEAIWQ 237 ++ S W+ +DP CGSGT+ IEAA++ ++ PG+ R W F W + + Sbjct: 172 ILLSRWK-NATFIDPFCGSGTIPIEAALIKSNTPPGIFRSFVSENWNFLNWPDRGKRLIN 230 Query: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297 YG D D +I+ A+ NA+ GI LI FE + Sbjct: 231 -----------------VDEIYGFDLDEEIIKIAKENAKRIGIKGLI-FEKRLFGTY--- 269 Query: 298 LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357 +++NPPYGERL + +K F + + + Sbjct: 270 --NMNNVWIVTNPPYGERLSYNID-------FSKFLK-NFEDSKFYILFPNRNFEKMFGK 319 Query: 358 RADKQYKAKNGPLDCVQKNYH 378 +A K+ + +N + Y+ Sbjct: 320 KATKKIRFQNSGIWVWFYMYY 340 >UniRef50_O28105 Putative RNA methyltransferase AF_2178 n=4 Tax=Archaea RepID=Y2178_ARCFU Length = 392 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 87/385 (22%), Positives = 160/385 (41%), Gaps = 32/385 (8%) Query: 3 SLFASTARGLEELLKTELENLGAVE--CQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 +A+ GLE++ E+E+ G + +G + F G+ + +SR R+ + Sbjct: 32 RFYATLTPGLEDVAAKEVESFGCKVEEIRERRGRIFFSGEKSAIPLLNHFSRTLERLNVL 91 Query: 61 LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF 120 L C+V D+Y V+ ++++ F G +FA+ + + S A A++D+F Sbjct: 92 LLRCEVEGLDDIYAAVKGLDFS--FVKGKSFAIRSLRVGEHDFTSMDIARVAGQAVIDSF 149 Query: 121 TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGD-GLHLRGYRDRAGIAPIKETLAA 179 R V+ + PD+ + V L + +D +GD +H R +R A + +A Sbjct: 150 MESYGERLKVNLNQPDVIIRVELVDSELFVGVDTTGDDAMHKRWWRVYNHPAHLNAAIAC 209 Query: 180 AIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV 239 ++ + W+ L+DPMCGSGT+ IEAA++ + + + + W+ Sbjct: 210 GMLRIADWKVDESLIDPMCGSGTIPIEAALMVRNVP---NLRDFAYKKL-----CEWELA 261 Query: 240 KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP 299 E YG + + + A NA AG+ + I F D ++T Sbjct: 262 FE---------PNEVRLKLYGMEKFRKHLVGAIRNAVNAGVADTIEFRQGDATEMT---- 308 Query: 300 KGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQF-GGWNLSLFSAS----PDLLSC 354 G Y +++NPPYG R+ + A+ L+ R K L + +A + Sbjct: 309 -GEYDVIITNPPYGLRIHRKGAIERLYHSFARAAKRCMNQNSRLVIITAEHRVFANAAEE 367 Query: 355 LQLRADKQYKAKNGPLDCVQKNYHV 379 L+ + K G L + + Sbjct: 368 AGLQCTHERFVKYGGLLTKIMVFMI 392 Score = 43.7 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 20/172 (11%), Positives = 48/172 (27%), Gaps = 36/172 (20%) Query: 532 MLGQMSKGKDFLNLFSYTGSATVHAG--------------LGGARSTTTVDMSRTYLEW- 576 + + ++ +G+ + A + + L+ Sbjct: 213 RIADWKVDESLIDPMCGSGTIPIEAALMVRNVPNLRDFAYKKLCEWELAFEPNEVRLKLY 272 Query: 577 -----------AERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRM 625 A RN G+ Q D E ++D+I +PP R+ Sbjct: 273 GMEKFRKHLVGAIRNAVNAGVAD-TIEFRQGDA----TEMTGEYDVIITNPPY---GLRI 324 Query: 626 EDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQE 677 ++R + + + KR + ++ + + + GL+ Sbjct: 325 HRKGAIERLYHSFARAAKRCMNQNSRLVIITAEHRVFAN--AAEEAGLQCTH 374 >UniRef50_A4EBB5 Putative uncharacterized protein n=4 Tax=Bacteria RepID=A4EBB5_9ACTN Length = 852 Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats. Identities = 145/336 (43%), Positives = 208/336 (61%), Gaps = 24/336 (7%) Query: 390 MVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRY-------ADWVVVQ 442 +E + NRLRKN + KWA++EG+ CYR+YDADLP+Y+ A+D Y W+V+ Sbjct: 445 PESEQFANRLRKNARLRRKWAKREGVSCYRVYDADLPDYSAAIDLYEGCPQTPGRWLVIA 504 Query: 443 EYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGE------ 496 EYA PKTID A+ R+ DI+A +L + + K R R +G +QY K G Sbjct: 505 EYAAPKTIDPALAQARMLDILAIAPRILDVPAEHVHAKARMRSRGGSQYGKQGAGKGASG 564 Query: 497 ------KGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKG-KDFLNLFSYT 549 + + E VN DYLD G+FLDHR+ R ++ + +K + FLNLF+YT Sbjct: 565 ERANIARRRLPLIEEGGLTFAVNFDDYLDVGIFLDHRVTRNLVREHAKQARRFLNLFAYT 624 Query: 550 GSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANE-- 607 G+AT +A GG T TVD+S TYL WAERN+R NG G H ++ D LAW+R+ + Sbjct: 625 GTATCYAADGGVEETVTVDLSNTYLNWAERNMRQNGFVGPQHHFVRDDVLAWIRDQRQTR 684 Query: 608 -QFDLIFIDPPTFSNSKRM-EDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL 665 ++DLIF+DPPTFSNS +M +DVQRDH+ L+ + RLL GG +FS N RGFR + Sbjct: 685 NRWDLIFVDPPTFSNSSKMGRRTWDVQRDHVELLAGVSRLLAQGGHAIFSCNLRGFRPET 744 Query: 666 DGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 LA+ G+ ++IT +T+ +DFARN+++H+C+++ Sbjct: 745 RKLARAGVVLEDITAQTIPEDFARNQKVHHCYIVRR 780 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 99/303 (32%), Positives = 147/303 (48%), Gaps = 20/303 (6%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 +AS G E L EL+ LG + ++G F+G+ Y++ +WSRLASR+ + LG Sbjct: 2 EFYASCPEGFEPALADELKRLGLSHVRRLKGRATFEGELEEGYRACLWSRLASRVFVVLG 61 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTR 122 + LY GV I W + PGAT A+ G+ + +RN+++ A++ KDA+ D Sbjct: 62 RFEAQDADGLYDGVYDIAWETIIRPGATIAITARGVTEQLRNTRFSALRAKDALCDRLAE 121 Query: 123 KNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLR----GYRDRAGIAPIKETLA 178 R +VD PD+ + + L + ASI+L LSGD L R R G ++ A Sbjct: 122 TTGRRADVDAADPDVHLLLSLRQRRASISLGLSGDPLFKRLPPAATRAGEGAHVLRPDYA 181 Query: 179 AAIVMRSGW---------------QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRW 223 A ++ + GW + L+D C G LL+EA + TDRAPG R RW Sbjct: 182 ALVLAQVGWTTLCERELTADDYENEALPTLVDASCAGGGLLLEAVNILTDRAPGAARERW 241 Query: 224 GFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGEL 283 GF GW HD A+W+++ AEA+ R E + D D + A + AG Sbjct: 242 GFEGWQLHDAALWEQLLAEARERETAA-RERQARIVAVDIDPAARKTAERMVKCAGYKRF 300 Query: 284 ITF 286 + F Sbjct: 301 VDF 303 >UniRef50_UPI0001621339 predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=UPI0001621339 Length = 698 Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats. Identities = 107/425 (25%), Positives = 178/425 (41%), Gaps = 59/425 (13%) Query: 1 MNSLFASTARGLEELLKTELEN--LGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIM 58 + S +A+ +GLE++L EL + + A + + GGV F+G Y + +W R R++ Sbjct: 90 LQSFYATCEKGLEQILAAELSSPLINASQVETDSGGVFFRGTQSTGYNANLWLRTGDRVL 149 Query: 59 LPLGECKVY----SDLDLYLGVQ-AINWTEMFNPGA----------------------TF 91 L C + LY V+ A +W + + F Sbjct: 150 CELARCLLPQGKSRFDLLYEFVREAADWPLLLVDDSAPLARTLQSETAERLPNRYKFKKF 209 Query: 92 AVHFSGLN-DTIRNSQYGAMKVKDAIVDAFTRKNL---PRPNVDRDAPDIRVNVWLHKET 147 V N + ++ Y + V +AI DA + P P D + + + ++++T Sbjct: 210 IVQIRLSNWKSTKDQNYVSASVSNAIWDALRDSCVGQWPAPAEREDLTAVPLFLDVNEDT 269 Query: 148 ASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQ---------------PGTP 192 A + D+SG LH RGYRD E LAAAI+ +GW Sbjct: 270 AFLYRDMSGVSLHRRGYRDVIDKTKPNEGLAAAILTLAGWNHNVHGFGAANKNDSGKDRV 329 Query: 193 LLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLA 252 LLDP CG+GT+LIEAA++A + APGL R W F W +D W E + A + + L Sbjct: 330 LLDPFCGTGTILIEAALMAYEIAPGLFRPHWPFQTWHDYDPRAWTECRDAAASV--QALP 387 Query: 253 EYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPP- 311 + G+D + I R + AR AG+ L+ + P+ V++NP Sbjct: 388 VSGARLIGNDMNDGAITRCKRAARAAGVLHLLELSSETSRHYKPPVIPS---LVVTNPSC 444 Query: 312 -----YGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAK 366 Y + L+ L G+++K+Q G ++ + S + L + + D ++ + Sbjct: 445 SAPLTYSSLRGEDERLLTLWLGFGQLLKSQCRGADVYVLSENDWLAHAMHMVPDSKWDLQ 504 Query: 367 NGPLD 371 Sbjct: 505 PNKQW 509 >UniRef50_A7HLT5 Putative RNA methylase n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HLT5_FERNB Length = 377 Score = 301 bits (770), Expect = 8e-80, Method: Composition-based stats. Identities = 98/382 (25%), Positives = 153/382 (40%), Gaps = 32/382 (8%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLG 62 + A GLE L EL G + F D + + A RI + + Sbjct: 22 TFVAFCTSGLEGALANELRKNNYKITYSSSGRIFFTADLKDTPSINTKLKAADRIAILIS 81 Query: 63 ECKVYSDLDLYLGVQAINWTEMFNPGATFAVH-FSGLNDTIRNSQYGAMKVKDAIVDAFT 121 + + +LY + + P A + N + + A VK AI+D Sbjct: 82 QFFAETFDELYDNILKSGVKDYVEPNAKITIEKIKVTNSKLSATGAIASVVKKAILDNIK 141 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGD-GLHLRGYRDRAGIAPIKETLAAA 180 + P+ + L +T + LD +G+ GLH RGYR +A API+ET+A Sbjct: 142 -------GSNETGPEYPFIIILKDDTVYLLLDTTGNIGLHKRGYRIKASKAPIRETIATG 194 Query: 181 IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK 240 +++ S W PL DP CGSGT+ IEAA+L P + R + W + W+ +K Sbjct: 195 VIILSHWNSEIPLFDPFCGSGTIPIEAAIL---EVPNISRK-YVSENWKILKKE-WEIIK 249 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLA----GIGELITFEVKDVAQLTN 296 K + + Y SD D +VI A+ N A I I F+ D +L Sbjct: 250 KNNG----KNIKTENKKIYASDVDCQVINIAKENYNRAKKLFNINTNIDFKCTDFRKLP- 304 Query: 297 PLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQ 356 V+SN PYG+R+ L + +I++ +F L S D Sbjct: 305 --VFNEPAYVISNLPYGQRI-EVDILKEI-----KILREKFPKGKFYLIHPSEDFEKYFG 356 Query: 357 LRADKQYKAKNGPLDCVQKNYH 378 +A K++K +N + Y+ Sbjct: 357 -KATKKFKFQNSGIWTYLYMYY 377 >UniRef50_A0KKF0 Ribosomal RNA large subunit methyltransferase I n=34 Tax=Bacteria RepID=RLMI_AERHH Length = 397 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 78/331 (23%), Positives = 134/331 (40%), Gaps = 18/331 (5%) Query: 371 DCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YN 429 T D + + + + RL+ + + +++G+ YRL A+ Sbjct: 55 WSGSSQIRARVWTFDKEETVDLDFFIRRLKYAQESRDGLIKRQGLTGYRLCAAESDGLPG 114 Query: 430 VAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKN 489 + +DRYAD++V Q + A R + + I V ++ + Sbjct: 115 LTIDRYADFLVCQILSA----GAEFQRDLITQALRTLYPECSIYERSDVAVRKKEGLKER 170 Query: 490 QYQKLGEKG-EFLEVTEYN-AHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFS 547 GE E + + E + V++ + TG +LD R R+ + ++GK LN F Sbjct: 171 TGVIYGETPTEPVVIEENGGVKILVDIRNGHKTGFYLDQRDNRQAAAKYTEGKRVLNCFC 230 Query: 548 YTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL---RE 604 YTG V+A GGA+ VD+S+ L+ A +N LNGL + ++ D L RE Sbjct: 231 YTGGFGVYALKGGAKEVVNVDLSQNALDIARQNAELNGLDTSNTQFVRHDVFKLLREYRE 290 Query: 605 ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD 664 ++FD+I +DPP F+ SK R + + +LL GG ++ + Sbjct: 291 KGDKFDVIVLDPPKFAESKA--QLLGACRGYKDINMLAFQLLAPGGVLLTYSCSGLMEQS 348 Query: 665 L------DGLAKLGLKAQEITQKTLSQDFAR 689 L D G AQ + + + D Sbjct: 349 LFQKIVADAALDAGRDAQILELLSQASDHPI 379 >UniRef50_C7PR68 Methyltransferase type 11 n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PR68_CHIPD Length = 315 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 124/318 (38%), Positives = 181/318 (56%), Gaps = 5/318 (1%) Query: 386 SKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYA 445 + NRL K K K AR++ I C+R+YD D+PE+ +++ Y D + V EY Sbjct: 1 MFDPSKLQMLENRLLKVYKHLRKTARRQNITCFRVYDDDIPEFPFSIELYEDHIYVAEYH 60 Query: 446 PPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKG-KNQYQKLGEKGEFLEVT 504 +D + L + VL + K+ +K R+R+ + QY+KL + + Sbjct: 61 RQHGMDEEAHEEWLDLCLEVISKVLEVPLEKIFVKQRQRKASRQEQYEKLSFESHEMVAN 120 Query: 505 EYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARST 564 E VNL+DYLDTGLFLDHRI R M+ + S GK LNLF YTGS +V+A G A Sbjct: 121 EAGLKFKVNLSDYLDTGLFLDHRITRGMVREQSAGKKVLNLFCYTGSFSVYAAAGNAAQV 180 Query: 565 TTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE-ANEQFDLIFIDPPTFSNSK 623 T+VD+S+TYL WAE N++LN H+ + AD L +L E FDL+ +DPPTFSNSK Sbjct: 181 TSVDLSKTYLAWAEENMKLNDFDVSKHQFVHADVLQYLDTLPAETFDLVVLDPPTFSNSK 240 Query: 624 RMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTL 683 RM++ D+QRDH++++ + R GG I FSNN R F ++ D + + ++IT +T+ Sbjct: 241 RMKEFLDIQRDHVSILNKVLAATRPGGVIYFSNNYRRFVLEADRILAS--EIKDITSQTI 298 Query: 684 SQDFARNRQIHNCWLITA 701 DF + + I C+ I Sbjct: 299 PFDF-QQKLIRKCYRIVR 315 >UniRef50_Q1DAR2 Putative uncharacterized protein n=2 Tax=Cystobacterineae RepID=Q1DAR2_MYXXD Length = 342 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 138/336 (41%), Positives = 202/336 (60%), Gaps = 7/336 (2%) Query: 370 LDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYN 429 + + + NRLRK K+F KWAR +G+ +R+YD D+PEY Sbjct: 9 TEGRLGMADTQGTHGSHDATGPEGMFANRLRKGDKRFRKWARTQGLTAFRVYDRDIPEYP 68 Query: 430 VAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQK-GK 488 A+D Y D V V EY + I + A + +++AA VL + ++ +KT Q G+ Sbjct: 69 YAIDVYGDRVHVVEYPRRRAIASGAADTQREEVLAAVTQVLAVPSERVFVKTHTPQPWGR 128 Query: 489 NQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSY 548 +QY ++G+ + V E WVNL DYLDTGLF+DHR R + + ++GK FLNLF+Y Sbjct: 129 SQYGRVGQDSGRIVVEEQGLKFWVNLGDYLDTGLFMDHRNTRARVREEARGKRFLNLFAY 188 Query: 549 TGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR---EA 605 TG+ TV+A GGA ST TVD+S TYL+WAE NL LNGL H L++AD AW+ +A Sbjct: 189 TGAFTVYAAAGGAASTMTVDLSNTYLDWAEDNLDLNGLADARHTLVRADAKAWVEAQADA 248 Query: 606 NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL 665 E++DL+ DPP+FS SK+M +F+VQRDH L+ ++ LL GG + FS N GF+++ Sbjct: 249 PERYDLVVCDPPSFSTSKKMSGSFNVQRDHPRLLAAIRALLAPGGVLYFSTNFLGFQLEP 308 Query: 666 DGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 G++ +EIT +++ +DF R ++IH CW + A Sbjct: 309 KAT--RGMEVEEITPRSIPEDFQR-KEIHRCWRMVA 341 >UniRef50_Q6MHD5 Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHD5_BDEBA Length = 305 Score = 298 bits (763), Expect = 6e-79, Method: Composition-based stats. Identities = 146/311 (46%), Positives = 191/311 (61%), Gaps = 12/311 (3%) Query: 393 EDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDA 452 + NRL KN KK + WA + IE YRLYD D+PEY VD Y D ++ Y D Sbjct: 2 DMIKNRLEKNYKKLKNWAERAQIEAYRLYDRDIPEYPYIVDIYKDHFLI--YDKSDLRDL 59 Query: 453 HK-ARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLW 511 K + + + A +K+V+K RERQ+G QY+KL K E V E A L Sbjct: 60 EKNHLPHVQEALKALFKC---DDSKIVIKKRERQEGLKQYEKLDAKEETFVVRESQALLK 116 Query: 512 VNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSR 571 VNL DYLDTGLFLDHR R+ + + K K FLNLF YTGS +V A LGGA TT+VDMS+ Sbjct: 117 VNLYDYLDTGLFLDHRPMRQKVFKSVKDKKFLNLFCYTGSVSVFAALGGAI-TTSVDMSQ 175 Query: 572 TYLEWAERNLRLNGLTGRAHRLIQADCLAWLR--EANEQFDLIFIDPPTFSNSKRMEDAF 629 TYL WA+ N +LN L H I AD L WLR ++ FD+IF+DPPTFSNSK+M+D F Sbjct: 176 TYLRWAQENFQLNNLDPAKHNFINADVLEWLRNTKSPNTFDVIFLDPPTFSNSKKMDDTF 235 Query: 630 DVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFAR 689 +V+RD L++ +LR G + FSNNKR F++ L+K K +EIT +++ QDF Sbjct: 236 EVERDQEFLVESCMNMLRPEGILYFSNNKRKFKISPAVLSK--YKVKEITAESIPQDF-H 292 Query: 690 NRQIHNCWLIT 700 +++IHNC+ I Sbjct: 293 DKKIHNCFEIR 303 >UniRef50_D2EHY6 N6-adenine-specific DNA methylase (Fragment) n=6 Tax=Bacteria RepID=D2EHY6_PEDAC Length = 228 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 80/227 (35%), Positives = 116/227 (51%), Gaps = 2/227 (0%) Query: 2 NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 L A+ A GLE L K EL++LG + Q G V F+G V ++ +W R A RI + + Sbjct: 4 YKLLATMASGLESLTKNELKDLGY-DVQTENGRVRFEGTFEDVIRTNLWLRTADRIKIIV 62 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 GE K + +L+ V+A+ W E+ F V+ + + K AIV+ Sbjct: 63 GEFKAVTFDELFEQVKALPWDELIPINGAFPVNGKSKKSQLHSVPDVQAITKKAIVEKLR 122 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 R + + V + K+ I LD +GD L RGYR G AP+KET+AAA+ Sbjct: 123 EVYHWRNQLPETGAKYGLEVSIDKDHVLITLDTTGDSLFKRGYRLYKGSAPLKETMAAAL 182 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGW 228 VM + W PL+DP CGSGT+ IEAA++ + APG +R + W Sbjct: 183 VMLTNWHADKPLVDPFCGSGTIPIEAALIGQNIAPGFNRS-FACESW 228 >UniRef50_B5IEU1 Putative RNA methylase n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IEU1_9EURY Length = 356 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 92/376 (24%), Positives = 156/376 (41%), Gaps = 22/376 (5%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 ++T GLE++ E+E GA ++ G V ++G+ L+Y+ ++ RI + L Sbjct: 3 FLSTTVHGLEDIAAREIEKFGARILELKTGKVIYEGNEELIYRLNYGAKRIFRIAVILSM 62 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 K+ D VQ + F TFAV + S V + I+ K Sbjct: 63 GKIKELEDTRKFVQEAD----FCINTTFAVRTKRRGEHDFTSMDVNAVVGEEIL-----K 113 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 P+ V+ D P++ W+ E +D +G+ LH RGYR API LA+ ++ Sbjct: 114 KCPKAKVNLDNPNLTFLCWVDNENFIFTIDTTGESLHRRGYRIYQHPAPINPVLASLMLK 173 Query: 184 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEA 243 +GW G ++DP CGSGT+ IEA +R P R + F DEA+W +K E Sbjct: 174 FAGWN-GEKMVDPFCGSGTIPIEA-YHNYNRVPNKFRT-FNFPKLPFFDEALWNGIKEE- 229 Query: 244 QTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPY 303 K Y + + + + NA+ AG + D + + P Sbjct: 230 ---MDKSERNKRLELYCVEKFKKHVNGCKLNAKNAG--ARFSCLQGDAENMHKFVDYAP- 283 Query: 304 GTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQY 363 +++NPP+G R+ S+ + L+ + ++ F G L+L + ++ Sbjct: 284 -FIITNPPFGLRIGSKKKIFKLYEEFAKELEEHFSGAILTLIIPYKKFENYF--EVLEKR 340 Query: 364 KAKNGPLDCVQKNYHV 379 G L + + Sbjct: 341 DIMYGELQTKIYRFKI 356 >UniRef50_A2SC20 N6-adenine-specific DNA methylase-like protein n=2 Tax=Burkholderiales RepID=A2SC20_METPP Length = 779 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 109/318 (34%), Positives = 160/318 (50%), Gaps = 8/318 (2%) Query: 3 SLFASTARGLEELLKTELENL-GAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 SLF A G+E LL E+ L Q +GGV +G R + SRLA R++ + Sbjct: 28 SLFLPCAAGVEALLADEVARLLPGAAAQTQRGGVMVRGGPREAMALNLGSRLAQRVLWQV 87 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 + S+ DLY ++ W + P T V + +++ + A+++KD + DA Sbjct: 88 ADAPYRSEDDLYALARSPRWPDWITPTQTLKVDVTAQRAPLKSLNFAALRIKDGVCDAMR 147 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 RP+VD PD+ + + L E A++ +D SG+ L RG+R+ G AP+KETLAAA+ Sbjct: 148 DALGARPSVDTRRPDLPLLLHLAPEHATLYVDTSGEALFKRGWREDQGEAPLKETLAAAM 207 Query: 182 VMRSGWQPGT---PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQE 238 + +GWQ PLLDP+CGSGT+ IEAA +A APG R R+ F +A Q Sbjct: 208 LAAAGWQGREADGPLLDPVCGSGTIAIEAAQIACGIAPGSLR-RFAFERLGPFRDAGTQR 266 Query: 239 VKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL 298 E + AR + + + D R+ A NA AG+ I + D Q P Sbjct: 267 AWRELREAARAAVHASAVPIFAGDVAFRMTDFAARNAARAGVAAAIELKTVDALQRAAP- 325 Query: 299 PKGPYGTVLSNPPYGERL 316 GT++ NPPYGER+ Sbjct: 326 --AERGTLMLNPPYGERI 341 >UniRef50_B5XY38 Ribosomal RNA large subunit methyltransferase I n=122 Tax=Gammaproteobacteria RepID=RLMI_KLEP3 Length = 400 Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats. Identities = 82/324 (25%), Positives = 130/324 (40%), Gaps = 17/324 (5%) Query: 376 NYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDR 434 T D A+ + + RL++ A ++G++ YRL + V +DR Sbjct: 64 QIRARVWTFDRNEAIDSAFFERRLQQAQTWRAWLAERDGLDSYRLIAGESDGLPGVTIDR 123 Query: 435 YADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKL 494 + ++ V+Q + A R + + I V ++ Q + Sbjct: 124 FGNFFVLQLLSA----GAEYQRAAIISALQNLFPDCAIYDRSDVAVRKKEGLELAQGPVV 179 Query: 495 GE-KGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSAT 553 GE L +TE+ L V++ TG +LD R +R + K LN FSYTG Sbjct: 180 GELPPALLPITEHGMKLLVDIQGGHKTGYYLDQRDSRLATRRYVADKRVLNCFSYTGGFA 239 Query: 554 VHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE---ANEQFD 610 V A +GG R T+VD S+ L+ A +N+ LNGL ++ D LR+ E+FD Sbjct: 240 VSALMGGCRQVTSVDTSQEALDVARQNVELNGLDLSKAEFVRDDVFKLLRKYRDQGEKFD 299 Query: 611 LIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL----- 665 +I +DPP F +K R + + +LL GG ++ + DL Sbjct: 300 VIVMDPPKFVENKS--QLMGACRGYKDINMLAIQLLNPGGVLLTFSCSGLMTTDLFQKII 357 Query: 666 -DGLAKLGLKAQEITQKTLSQDFA 688 D G Q I Q + D Sbjct: 358 ADAAIDAGRDVQFIEQFRQAADHP 381 >UniRef50_B5F1W3 Ribosomal RNA large subunit methyltransferase I n=98 Tax=Gammaproteobacteria RepID=RLMI_SALA4 Length = 403 Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats. Identities = 86/370 (23%), Positives = 142/370 (38%), Gaps = 22/370 (5%) Query: 333 MKNQ---FGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPA 389 ++ F G +S +L + + + G T D + Sbjct: 23 LRRHPWVFSGA-VSRLEGKANLGETIDIVDHQGKWLARGA-WSPASQIRARVWTFDKAES 80 Query: 390 MVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQEYAPPK 448 + +T RLR+ + + A+++G++ YRL + V +DR+ ++V+Q + Sbjct: 81 IDIAFFTRRLRQAQQWRDWLAKKDGLDSYRLIAGESDGLPGVTIDRFGHFLVLQLLSA-- 138 Query: 449 TIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGE-KGEFLEVTEYN 507 A R L + I V ++ Q GE L + E+ Sbjct: 139 --GAEYQRAALISALQTCYPDCAIYDRSDVAVRKKEGMALTQGPVTGELPPALLPIEEHG 196 Query: 508 AHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTV 567 L V++ TG +LD R +R + + + LN FSYTG V A +GG R +V Sbjct: 197 MKLLVDIQGGHKTGYYLDQRDSRLATRRYVENQRVLNCFSYTGGFAVSALMGGCRQVVSV 256 Query: 568 DMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL---REANEQFDLIFIDPPTFSNSKR 624 D S+ L+ A +N+ LN L ++ D L RE E+FD+I +DPP F +K Sbjct: 257 DTSQDALDIARQNVELNQLDLSKAEFVRDDVFKLLRAYREHGEKFDVIIMDPPKFVENKS 316 Query: 625 MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL------DGLAKLGLKAQEI 678 R + + +LL GG ++ + DL D G Q I Sbjct: 317 --QLMGACRGYKDINMLAIQLLNPGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFI 374 Query: 679 TQKTLSQDFA 688 Q + D Sbjct: 375 EQFRQAADHP 384 >UniRef50_D0LH66 Oxidoreductase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LH66_HALO1 Length = 365 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 132/323 (40%), Positives = 176/323 (54%), Gaps = 6/323 (1%) Query: 379 VAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADW 438 + A AE NRLRK + KWAR+ G+ CYRLYD D+PE +A+D Y + Sbjct: 48 WDAEAEPALIASHAEMLGNRLRKRARHLRKWARRRGVSCYRLYDRDIPEIALAIDLYGER 107 Query: 439 VVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKG 498 V + Y + + AT LG+ + LK R RQ+G QY++L Sbjct: 108 VHIASYRRRRDYGP----AWRAAMAQATADALGVERELVYLKERRRQRGSAQYERLERSR 163 Query: 499 EFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGL 558 E V E LWVNL DYLDTGLFLDHR R + ++G FLNLF YTG+ TVHA Sbjct: 164 ERFAVREGACELWVNLRDYLDTGLFLDHRDTRARVAAEAEGTRFLNLFCYTGAFTVHAAA 223 Query: 559 GGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPT 618 GAR + +VD+S TYL+W NL LNGL AHR ++ D +L FDL +DPPT Sbjct: 224 AGARQSVSVDLSHTYLDWTRDNLELNGLDTDAHRQVREDVFTYLHGERLAFDLAVLDPPT 283 Query: 619 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEI 678 FSNSK+M D D+QRDH+ L+ LL GG + FS R F+++ + L + +I Sbjct: 284 FSNSKKMRDVLDIQRDHVELIARTLDLLVPGGVLYFSTGYRRFKLEREALRGA-RRIDDI 342 Query: 679 TQKTLSQDFARNRQIHNCWLITA 701 T +T +DF + + H CW + Sbjct: 343 TAETTPEDFRGH-RPHQCWRLVR 364 >UniRef50_B5Y5B8 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y5B8_PHATR Length = 547 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 118/446 (26%), Positives = 184/446 (41%), Gaps = 50/446 (11%) Query: 1 MNSLFASTARGLEELLKTELENLGAVEC-QVVQGGVHFKGDTRLVYQSLMWSRLASRIML 59 + S A+ GL + L EL LG + + V F +T+ ++L+W+R + ++M Sbjct: 58 IGSYIATCIPGLSDALSDELRTLGCQDVERSASSAVRFNANTQTALKALLWTRTSHKVME 117 Query: 60 PLGECK--VYSDLDLYLGVQ-AINWTEMFNPGA------TFAV---HFSGLNDTIRNSQY 107 L E + S DL+ + A+ E+ G + V + S + I +S Y Sbjct: 118 FLCESPPTLKSREDLHRFILDAVPVKELLGDGRGGLLTLSVGVILNNPSKIPKDINHSHY 177 Query: 108 GAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKE----TASIALDLSGDGLHLRG 163 A+ VK+A+ DA RPNVD D PD+ + L S+ L LH RG Sbjct: 178 SALTVKNALCDAVRELRDDRPNVDLDDPDVPLTAVLLGTDSGARVSLYRQLHNGSLHKRG 237 Query: 164 YRDRA-GIAPIKETLAAAIVMRSGWQPGT----------PLLDPMCGSGTLLIEAAMLAT 212 YR A A +KE+LAA +++ +GW LLDPM GSG+LL+E AM+A Sbjct: 238 YRSGAIHKAAMKESLAAGLLLTAGWDQKCRDARREDDAVVLLDPMAGSGSLLLEGAMMAV 297 Query: 213 DRAPGLHRGRWGF--------SGWAQHDEAI-----WQEVKAEAQTRARKGLAEYS---- 255 D APGL R + G W HD + W+ + +A +RA+ GL Sbjct: 298 DLAPGLMRIKCGLPGHSMPPVVRWK-HDGDMRVVDEWKALLLDATSRAKSGLRWMQSTDT 356 Query: 256 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN-PLPKGPYGTVLSNPPYGE 314 G+D + AG+ L+ E D + P +G V+SNPP+G Sbjct: 357 VEILGNDIHDGALNLFENALDAAGLRRLVQLEEGDCSDWKPKPKREGTPFIVVSNPPWGV 416 Query: 315 RLDSEPALIALHSLLGRIMKNQFG-GWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCV 373 RL + + + ++ G + S + + L LR + K G D Sbjct: 417 RLTED--MSESWESMRIFLRECCPSGTEAWVLSGNAEATKHLGLRRSQSLALKTGDQDLR 474 Query: 374 QKNYHVAESTPDSKPAMVAEDYTNRL 399 Y + + + + L Sbjct: 475 WLQYILRDRSEILAEIEEKKSRRKDL 500 >UniRef50_Q12JE5 Ribosomal RNA large subunit methyltransferase I n=24 Tax=Bacteria RepID=RLMI_SHEDO Length = 397 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 85/357 (23%), Positives = 141/357 (39%), Gaps = 18/357 (5%) Query: 347 ASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKF 406 P + + A G + V T D + A+ A+ + R+++ Sbjct: 33 GKPQAGDTVDVVAHDGRWLGRGA-WSPESQIQVRIWTFDKEEAIDADFFARRIQRAQAGR 91 Query: 407 EKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAA 465 E R++G+ YRL A+ + +DRYAD +V Q A K R L + +A Sbjct: 92 EDLIREQGLTGYRLIAAESDGLPGITIDRYADVLVCQLL----NTGAEKWRDTLVEQLAL 147 Query: 466 TISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGE-FLEVTEYNAHLWVNLTDYLDTGLFL 524 I V ++ Q GE + + E + V++ TG +L Sbjct: 148 QFPGCAIYERSDVDSRKKEGLAPVQGLLHGELPAMPIIIEENGIKIAVDVVKGHKTGFYL 207 Query: 525 DHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLN 584 D R R + + KGK LN F YTG+ ++A GA S VD+S L+ A N+ +N Sbjct: 208 DQRDNRAIAARFVKGKSVLNCFCYTGTFGLYAAKAGAASIENVDVSALALQTARDNMAIN 267 Query: 585 GLTGRAHRLIQADCLAWLRE---ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKD 641 GL +AD LR+ + FD+I +DPP F+++K + R + + Sbjct: 268 GLDDSHVNYHEADVFKLLRQYRDEGKTFDVIVLDPPKFADNKSQLN--GACRGYKDINMI 325 Query: 642 LKRLLRAGGTIMFSNNKRGFRMDL------DGLAKLGLKAQEITQKTLSQDFARNRQ 692 +LL GG ++ + DL D + Q + + + D + Sbjct: 326 AMQLLNPGGILLTFSCSGLMESDLFQKVVADAALDAKREVQFVERMHQASDHPISSA 382 >UniRef50_C6XXB0 PUA domain containing protein n=4 Tax=Sphingobacteriaceae RepID=C6XXB0_PEDHD Length = 394 Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats. Identities = 80/361 (22%), Positives = 142/361 (39%), Gaps = 27/361 (7%) Query: 345 FSASPDLLSCLQLRADKQ----YKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLR 400 +P+ + LR+ + Y N + E+T + Y +L+ Sbjct: 29 IKGNPENGEVVTLRSAAKEFLAYAYYNDQSRVALRLLEWDENT-----TINKSWYREKLK 83 Query: 401 KNLKKFEKWARQEGIECYRLYDADLP-EYNVAVDRYADWVVVQEYAPPKTIDAHKARQRL 459 + + E RL ++ + VD+YA ++ +Q + + L Sbjct: 84 AAIASRDHVL-NENTNTCRLVFSEADFLPGLIVDKYAGFLSLQILSA----GMESIKATL 138 Query: 460 FDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGE-KGEFLEVTEYNAHLWVNLTDYL 518 +++ ++ GI + Q GE EF+EV E +N+ D Sbjct: 139 IELLRELLNPTGIFDKSDAGARKHENLEATQGLLWGETPPEFIEVKENGILYHINIADGQ 198 Query: 519 DTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAE 578 +G + D R R++L ++GK L+ F Y+G T+++ GA S T+VD S +E + Sbjct: 199 KSGFYCDQRDNRKILADYTRGKSVLDCFCYSGGFTLNSLKSGAASVTSVDSSALAIETLQ 258 Query: 579 RNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDH 635 NL LNG G IQ+D LR + + FD++ +DPP ++ S+ D R + Sbjct: 259 HNLELNGFKGSNQHSIQSDVNKQLRIFKDEGKTFDVLVLDPPKYAPSRSALD--RAARAY 316 Query: 636 LALMKDLKRLLRAGGTIMFSNNKRGFRMDLD------GLAKLGLKAQEITQKTLSQDFAR 689 L + LL+ GG + + M+ G + Q I Q +D Sbjct: 317 KDLNRLGMLLLKKGGILATFSCSGAVDMETFKQIIAWAALDAGREVQIIRQFCQPEDHPV 376 Query: 690 N 690 + Sbjct: 377 S 377 >UniRef50_A4J674 SAM-dependent methyltransferase n=33 Tax=Bacteria RepID=A4J674_DESRM Length = 418 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 68/354 (19%), Positives = 136/354 (38%), Gaps = 20/354 (5%) Query: 345 FSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLK 404 + +++ + G ++ V T +S+ + E + R++ + Sbjct: 56 IIGDFNPGDIVEVVDFRDRFVGRGYINPA-SQITVRIMTRNSEEEINEEFFRKRIQGAWE 114 Query: 405 KFEKWARQEGIECYRLYDADLP-EYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDII 463 +K R+ R+ + + VD++ D++ VQ A + ++ +F ++ Sbjct: 115 YRQKVVRESN--ACRVIFGEADFLPALIVDKFGDYLSVQTLA----LGIDVHKETIFKLL 168 Query: 464 AATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLF 523 + G+ V + + + E V+L TG F Sbjct: 169 QEIVQPKGMYERNDVSVRKLEGLPLITGFIGEPFDPKVVIKENGIQFVVDLEGGQKTGYF 228 Query: 524 LDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRL 583 LD R R L + KG L+ F +TG+ +++A GA+ +D++ LE A N +L Sbjct: 229 LDQRENRMALQGLVKGSRVLDCFCHTGTFSMYATKYGAKEVLGLDIAAPALEVARVNAQL 288 Query: 584 NGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMK 640 NG R + + LR A E+FD++ +DPP F+ S++ R + + Sbjct: 289 NGYGDRC-TFKECNSFDELRAMERAEEKFDVVILDPPAFTKSRKA--IEGAIRGYKEINL 345 Query: 641 DLKRLLRAGGTIMFSNNKRGFRMD------LDGLAKLGLKAQEITQKTLSQDFA 688 +LL GG ++ + D LD G + + + + ++D Sbjct: 346 RGMKLLPPGGYLITCSCSYHMHEDMFLDVILDAARDAGRQLRLVELRRQAKDHP 399 >UniRef50_A8DJY9 SAM-dependent methyltransferase n=2 Tax=Bacteria RepID=A8DJY9_9BACT Length = 425 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 71/324 (21%), Positives = 121/324 (37%), Gaps = 14/324 (4%) Query: 375 KNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLP-EYNVAVD 433 + +A L + K RL + + + VD Sbjct: 91 RRCSIAARMVAFGDTDPYTAIRQNLTHAVAFRRKHFDPAQTNAVRLVNGEGDMLPGLIVD 150 Query: 434 RYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQK 493 +YAD +V+Q T+ + + + + + I + E Sbjct: 151 QYADVLVMQI----STLGMERLKPFVLETLVELTQPRAIYEKSDIAARYEEGLTDFAGLI 206 Query: 494 LGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSAT 553 G L VTEY V++ TGLFLD R R ++ ++ G+ LN F+YTG + Sbjct: 207 YGRDFGPLVVTEYGLRFHVDIKHGQKTGLFLDQREMRALVERLCTGRRVLNGFAYTGGFS 266 Query: 554 VHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREAN-EQFDLI 612 ++A G A+ +VD S + L+ A+ N LNG + ++AD +LR FD I Sbjct: 267 LYAHRGRAQRVVSVDSSGSALKLAQSNHALNGFSVTDDDFVEADMFTYLRRLEAAAFDFI 326 Query: 613 FIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL------D 666 +DPP + + ED R + L + + GG ++ S+ L Sbjct: 327 ILDPPALAR--KREDVLRAGRAYKDLNRLAIAKVAPGGLVLTSSCSHFVDEKLFGQIVFQ 384 Query: 667 GLAKLGLKAQEITQKTLSQDFARN 690 + G + + I + + D N Sbjct: 385 AACEAGRQVRIIHRHRQAFDHPVN 408 >UniRef50_Q6MCL8 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MCL8_PARUW Length = 333 Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats. Identities = 118/310 (38%), Positives = 178/310 (57%), Gaps = 7/310 (2%) Query: 396 TNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKA 455 TNR+RKN + KWA++ C+R+YD ++ +Y +A+D Y V ++ + + Sbjct: 23 TNRIRKNYRHIRKWAKRTQTNCFRIYDKEIHQYPLAIDFYDGRFCVHYFSKAANDNDYDP 82 Query: 456 RQRLFDI-IAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNL 514 + L + I A ++ + + +TR ++K QY++ G EF + E+ VNL Sbjct: 83 PKELKEATIHALKTIFNVEEELIFWRTRSKRKETRQYERQGNAKEFFSIVEFGVQFKVNL 142 Query: 515 TDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYL 574 DYLDTGLFLDHR R+M+ Q S K LNLF+YT S +VHA GA T +VDMS TY Sbjct: 143 IDYLDTGLFLDHRETRKMVTQASINKKLLNLFAYTCSFSVHAAASGAIFTKSVDMSNTYT 202 Query: 575 EWAERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAFDV 631 EW + N RLN L+ + + +I+ADCL +L + N Q+D+I IDPPT S SK+M+ FD+ Sbjct: 203 EWGKDNFRLNSLSLQNNEVIRADCLKFLDDEIKKNLQYDVIVIDPPTISRSKKMDQLFDI 262 Query: 632 QRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNR 691 Q D+++++ +LL+ G I FS N R F + Q+++ KT+ DF + Sbjct: 263 QVDYVSMLSKALKLLQKDGVIFFSTNFRKFVFNQTLFPF--CLIQDVSHKTIPIDF-HDS 319 Query: 692 QIHNCWLITA 701 +IH CW I Sbjct: 320 KIHRCWKIIK 329 >UniRef50_C8PND5 Putative uncharacterized protein n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PND5_9SPIO Length = 358 Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 128/346 (36%), Positives = 188/346 (54%), Gaps = 30/346 (8%) Query: 383 TPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYAD----- 437 SK A + NRL K K +K+AR+ GI YRLYD D+PE VAVD Y + Sbjct: 1 MTPSKSPQQAALFYNRLVKRYKHLKKYARRLGIFAYRLYDRDIPEIPVAVDLYIEDVTGL 60 Query: 438 -WVVVQEYAPPK----TIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQ 492 + V+ EY T K L ++ A + L I+P ++ K R+RQ+G+ QY+ Sbjct: 61 IFAVLTEYERSTDHNYTTKEGKTAASLSELTEALCAALQISPAQVYEKCRKRQRGEAQYE 120 Query: 493 KLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSA 552 K+ + G+ + V E ++N++DYLDTGLFLDHR AR + + + GK LNLF YT S Sbjct: 121 KIADSGKRIIVREGKCRFFINVSDYLDTGLFLDHRPARIAVAESAAGKMVLNLFCYTASF 180 Query: 553 TVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTG-RAHRLIQADCLAWLR---EANEQ 608 +VHA + GAR +VD+S+ YL+WA +N +LNG+ +Q+D +L + E+ Sbjct: 181 SVHALVSGARQVCSVDLSKNYLQWAYQNAQLNGVDDPARCTFVQSDVRLFLEQAAKRKER 240 Query: 609 FDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGL 668 +D+I DPPTFSNSKR FDV R L++ ++L A G + FS N R R + L Sbjct: 241 WDIIICDPPTFSNSKRTPQFFDVNRHWQDLIRSCCKVLSAEGVLYFSTNSRTLRFNAAEL 300 Query: 669 AKL---------------GLKAQEITQKTLSQDFARNRQIHNCWLI 699 + Q+I+ +++ +DF RN++IH W I Sbjct: 301 SDRPSGTAGKDRFVYQNMLFTVQDISAQSIPEDF-RNKKIHRLWKI 345 >UniRef50_B0N335 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N335_9FIRM Length = 400 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 71/328 (21%), Positives = 134/328 (40%), Gaps = 22/328 (6%) Query: 376 NYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDR 434 + V + D + R++ + +E + RL + E + VDR Sbjct: 63 HITVRILSKDINEIFDRNFFKRRIQFAYDFRKT-VEKENLTNCRLVFGEADELPGLTVDR 121 Query: 435 YADWVVVQEYAPPKTIDAHKARQRLFDIIAATI-----SVLGIAPNKLVLKTRERQKGKN 489 Y D +V Q + K + +++I+ + V GI + + Sbjct: 122 YNDILVCQI----SSYGLDKIKDMIYEILLEVLTEDGQDVKGIYERNDIKVRAKEGLPLE 177 Query: 490 Q-YQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSY 548 + Y + + E +L V++ + TG FLD + R +L ++ GK L+ FS+ Sbjct: 178 KGYWRNINLPTTTIINENGINLSVDVENGQKTGYFLDQKANRVLLRNIAYGKKVLDCFSH 237 Query: 549 TGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANE- 607 TG ++A G A+ VD+S+T L+ N +LN L G ++ D +L + + Sbjct: 238 TGGFALNAAYGKAKEVVAVDVSQTALDQGYANAKLNNLQG-CISFVKDDVFDYLDKCKKG 296 Query: 608 QFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD--- 664 QFD+I +DPP F+ S+R D + + +LL GG ++ + R D Sbjct: 297 QFDIIVLDPPAFTKSRRTVD--HAYNGYKKINMKAMKLLGRGGYLITCSCSRFMETDNFE 354 Query: 665 ---LDGLAKLGLKAQEITQKTLSQDFAR 689 + + G+ ++++ + D Sbjct: 355 KMLRESAHEAGVTLKQVSVTQQNPDHPI 382 >UniRef50_C1E310 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E310_9CHLO Length = 1009 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 127/516 (24%), Positives = 195/516 (37%), Gaps = 131/516 (25%) Query: 1 MNSLFASTARGLEELLKTELEN--LGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIM 58 + +A+ GLE+++ ELE+ +GA + +V GV F+GD R+ Y++ +W R A R++ Sbjct: 479 LGDYYATCHPGLEDVVAKELESELIGASDVRVGASGVSFRGDARVGYRANVWLRCAIRVL 538 Query: 59 LPLGEC----KVYSDLDLYLGVQ-AINWTEMFNPGA--TFAVHFSGLNDT-IRNSQYGAM 110 L V +Y V+ A W E+ TF+V + T + +++ + Sbjct: 539 CELDRGYIDPNVPGGAAIYDFVRDAAPWHEVIPADDGLTFSVESRVRSCTDVTSTRLAST 598 Query: 111 KVKDAIVDAFTRKNLPRP---NVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDR 167 + KDAI DA N RP + D+ + + L ++ A + D+SG+ LH RGYRD Sbjct: 599 RAKDAICDALVDVNGWRPPPPQFGHSSADVPLYLSLFRDEAKLYRDMSGESLHRRGYRDA 658 Query: 168 A-GIAPIKETLAAAIVMRSGWQPG-----------TPLLDPMCGSGTLLIEAAMLATDRA 215 A A + E AA ++ +GW L+DPMCGSGTLLIE AM+A A Sbjct: 659 AIHRAALNEAAAAGVLSLAGWSAACDRARERGLVLPALVDPMCGSGTLLIEGAMMAGRVA 718 Query: 216 PGL-----------------------HRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLA 252 PGL R + F W HD + +EV EA Sbjct: 719 PGLIRVDAAGGFGKGGDGGRDPSPGVQRPAFAFERWPDHDPTLLEEVLEEAAEIGAAARK 778 Query: 253 EY--SSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL------------ 298 + + G+D A + AR A AG+ +I F D A LT+P Sbjct: 779 KMGGAPVIIGNDVHAGALSLARRAAMAAGVDGVIDFVQGDAADLTHPKLTEFTAAALERD 838 Query: 299 ---------------------PKGPYGTVLSNPPYGERLDSE------------------ 319 +G V+SNPP+G R+ + Sbjct: 839 GLQRDVDEPVDLDDLGPTALRAEGGGVLVVSNPPWGMRIGARDDGYDGDDAGDGYGDGNW 898 Query: 320 ------------------------------PALIALHSLLGRIMKNQFGGWNLSLFSASP 349 P + LG + + GG L S Sbjct: 899 DDAASDAGSVRGGDSVRGGESVPSAGTLRAPDVEEAWQSLGAFFRRECGGATAHLLSGDA 958 Query: 350 DLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPD 385 + L++RA ++ G +DC Y + Sbjct: 959 NATRPLRMRARRKRVLGIGGVDCRLLEYRILPPRRR 994 >UniRef50_Q04XY1 SAM-dependent methyltransferase n=4 Tax=Leptospira RepID=Q04XY1_LEPBL Length = 335 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 134/314 (42%), Positives = 189/314 (60%), Gaps = 9/314 (2%) Query: 394 DYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAH 453 + NRL + K ++KWAR+ GIEC+R+YD D+P+ V+VD Y + + Y I Sbjct: 21 MFRNRLLRMSKHWKKWARKRGIECFRIYDRDIPQVPVSVDLYGPYCQISAYKNSYEISDE 80 Query: 454 KARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVN 513 + +I L + + K RE +KGK QY+K E+ + LEVTE ++N Sbjct: 81 TRERENVEIRQIVAETLNLDAGFIFWKKREPKKGKKQYEKQSEQSKLLEVTENGLRFYIN 140 Query: 514 LTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTY 573 L+DY+DTGLFLDHRI R ++ + SKGK FLNLFSYTGS TV+A GGA + ++D+S TY Sbjct: 141 LSDYIDTGLFLDHRITRDLIRKESKGKKFLNLFSYTGSFTVYAASGGATQSLSIDLSNTY 200 Query: 574 LEWAERNLRLNGLTGRAHRLIQADCLAWL-----REANEQFDLIFIDPPTFSNSKRMEDA 628 L WAE NL+LNGL+ HRL++AD + WL + E++DLI +DPPTFSNSK+M Sbjct: 201 LAWAEENLKLNGLSLIKHRLLRADVVEWLYNERKKPDRERYDLIVLDPPTFSNSKKMTGI 260 Query: 629 FDVQRDHLA-LMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDF 687 FD+Q+DH+ L + G + FS N R F + + ++IT+ TL DF Sbjct: 261 FDIQKDHVEILNILYRDFALPGAVLYFSTNFRKFELSQTSVLWN--NPKDITKMTLPDDF 318 Query: 688 ARNRQIHNCWLITA 701 RN++IH CW + Sbjct: 319 -RNQKIHFCWKMEK 331 >UniRef50_Q6MCD2 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MCD2_PARUW Length = 390 Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats. Identities = 68/337 (20%), Positives = 124/337 (36%), Gaps = 17/337 (5%) Query: 365 AKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRK----NLKKFEKWARQEGIECYRL 420 + ++ + L+K K ++ YR Sbjct: 43 CASSHQLLGYGYFNRRSGIVGRMVSFNNVPPLETLKKRLISAWKFRQQLFDFRQTNAYRF 102 Query: 421 YDADLPE-YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVL 479 + + +D Y D V+Q T + + + + + I ++ Sbjct: 103 VHGEGDAIPGLTIDVYQDVFVLQS----STKGIDELKPWIIETLNELFQPRSIFEKSILP 158 Query: 480 KTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKG 539 +E Q GE+ + E NL TG FLDHR R+ + +S Sbjct: 159 SRKEEGLADVQKHLSGEEVGDISFFENGLKFTTNLHKSQKTGFFLDHREMRQWIKTLSFN 218 Query: 540 KDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCL 599 K LN FSYTG +V+A GGA+ +VD+S+ + +++ LN L+ R I AD Sbjct: 219 KKVLNAFSYTGGFSVYAMAGGAKRVDSVDISQEAVNACQKHFVLNELSEFGSRFICADVF 278 Query: 600 AWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 659 +LRE +DL+ +DPP F+ K+ +D R + + + + + ++ + Sbjct: 279 NFLREDVLDYDLVILDPPAFA--KKQKDVIAACRGYKDINRLAMQKMPRRSLLLTCSCSH 336 Query: 660 GF------RMDLDGLAKLGLKAQEITQKTLSQDFARN 690 ++ A+ + I + L+ D N Sbjct: 337 HVNELLFQKVVFQAAAEANRNVRLIGRHQLACDHPIN 373 >UniRef50_Q73LF1 Putative uncharacterized protein n=1 Tax=Treponema denticola RepID=Q73LF1_TREDE Length = 335 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 137/332 (41%), Positives = 196/332 (59%), Gaps = 18/332 (5%) Query: 386 SKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRY---------A 436 K AE + NRL+K K KWA++EG+ YRLYD D+PE +AVD Y Sbjct: 2 QKNQYQAELFKNRLQKRFKHLLKWAKREGVFAYRLYDKDIPEIPLAVDIYFAETEETEKR 61 Query: 437 DWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGE 496 ++++ Y P + R+ L I A S L I ++ +K RE+QKGK+QY+K G Sbjct: 62 AFLLIYLYKRPYEKSQEEEREWLLVIEEAASSSLLIPKERIFIKLREKQKGKSQYEKAGS 121 Query: 497 KGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHA 556 + V E +VN+ DYLD+GLFLDHR AR M+ + +K K LNLFSYTGS +VHA Sbjct: 122 SKNLIRVKEGECFFYVNVEDYLDSGLFLDHRPARSMVFKEAKNKKVLNLFSYTGSFSVHA 181 Query: 557 GLGGARSTTTVDMSRTYLEWAERNLRLNGL-TGRAHRLIQADCLAWLREA---NEQFDLI 612 GGA S +VD+S TYL WA+ NL+LN L +LI++D + +L++A +++DLI Sbjct: 182 AKGGAASVDSVDLSNTYLNWAKENLKLNKLFDEEKTQLIKSDVIVFLKKAIEEQKKWDLI 241 Query: 613 FIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGL---A 669 DPPTFSNSK D FDV RD L L ++L G + FS N + + D L + Sbjct: 242 ICDPPTFSNSKSA-DIFDVNRDWLKLCLLCLKVLSKNGKLYFSTNSQKIKFDEAELINFS 300 Query: 670 KLGLKAQEITQKTLSQDFARNRQIHNCWLITA 701 + ++ ++IT+ ++ +DF RN++IH W+I A Sbjct: 301 EQKIRVKDITKASIPEDF-RNQKIHKMWMIEA 331 >UniRef50_A6GJE9 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJE9_9DELT Length = 399 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 109/397 (27%), Positives = 175/397 (44%), Gaps = 28/397 (7%) Query: 4 LFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 +F + A GLEELL E+E LG E + V GGV GD VY+ + L R+++ +GE Sbjct: 1 MFVAAAPGLEELLLEEVEALGIEEARAVPGGVSCFGDFADVYRLNLGCGLGLRVLIRVGE 60 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 V L + I W + G V + ++ A +V+ I + Sbjct: 61 FFVRDFRKLERVARDIEWERWLDWGMGVRVRAHAKRSRLYHTGGIAERVERGIFARSRGE 120 Query: 124 NLPRPNVDRDAPD-----------IRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAP 172 + + + + P + V V + ++ +I++D +G L RG+R AP Sbjct: 121 AVFCVDGEAEGPGGGDHGPSGFEPVLVQVRIIRDRCTISIDTTGSLLPKRGWRPEGAKAP 180 Query: 173 IKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHD 232 ++E LA A++ S W+PG L+DPM GSGTLLIEAA + R R+GF G +D Sbjct: 181 LREDLACALLKVSSWRPGVALVDPMVGSGTLLIEAATRSRGWPANHAR-RFGFVGAPYYD 239 Query: 233 EAIWQEVKAEAQTRAR-KGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDV 291 + EA+ RA G + F G D DA I+ AR NA A +G+ + + Sbjct: 240 SRRF-----EAERRALSAGEDPVAGAFVGFDRDAGAIEIARRNAARAQLGDALELAQGSI 294 Query: 292 AQLTNPLPKGPYG-----TVLSNPPYGERLDSEPALIALHSLLGRI---MKNQFGGWN-- 341 L G +++NPP+G R+ L L++ LG+ + + G Sbjct: 295 GSLDGSAVATAVGGAESVLIVANPPWGRRVGDPSRLRNLYASLGQFAARLNDALDGRELG 354 Query: 342 LSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYH 378 L++ + P L L +++ K G ++ Sbjct: 355 LAMVTPEPKLAHATGLALERRATVKMGSVEVGLWVCD 391 >UniRef50_Q7ND71 Glr4365 protein n=1 Tax=Gloeobacter violaceus RepID=Q7ND71_GLOVI Length = 407 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 82/335 (24%), Positives = 138/335 (41%), Gaps = 19/335 (5%) Query: 370 LDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-Y 428 Q V + + + R K L+ ++ ++ +R + Sbjct: 67 FLNRQSQIAVRYLERGADVVIDRAWWIERFGKALEHRHRFL-GPQVKTFRWIHGEADGLP 125 Query: 429 NVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGK 488 + VDRY D+VVVQ A + R+ + + +A S LGI R + Sbjct: 126 GLTVDRYGDFVVVQLLA----LGLEPWREVIVECLAQLGSPLGIFERSDAPVRRLEGLKE 181 Query: 489 NQYQKLGE-KGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFS 547 GE +E+ E +A L V++ TGLFLD R R+ + ++G++ LN F Sbjct: 182 RVGCLWGEAPPTLVEIEEGSARLLVDIQQGQKTGLFLDQRFNRQHAARFAEGRNVLNAFG 241 Query: 548 YTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR---E 604 YTG+ V L GA S VD++ AE+N +LNG+ G R + A+ LR Sbjct: 242 YTGAFGVQCALAGASSVLNVDIAEAATAIAEQNAQLNGV-GEQCRALTANAFDVLREFDR 300 Query: 605 ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD 664 +F++I +DPP F+ S+ + + R + + +LL GG ++ + M+ Sbjct: 301 EGRRFEMIILDPPAFAKSRSVLE--GALRGYKEINLRAMKLLTPGGILVTCSCSSHLSME 358 Query: 665 L------DGLAKLGLKAQEITQKTLSQDFARNRQI 693 + D G A + Q+ + D I Sbjct: 359 MFRDVIRDAAQDTGRTACLVEQRGQAPDHPILLHI 393 >UniRef50_C7GB40 Methyltransferase n=13 Tax=Bacteria RepID=C7GB40_9FIRM Length = 403 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 62/342 (18%), Positives = 136/342 (39%), Gaps = 26/342 (7%) Query: 363 YKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYD 422 Y G ++ + T + R++ + + R+ Sbjct: 48 YPMGKGFINTN-SKIRIRMLTRHVDQEIDRTFLQMRVKNAWEYRKTTVD---TSSCRVIF 103 Query: 423 ADLP-EYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATIS-----VLGIAPNK 476 + + VD+Y D +VV+ A + + ++ + ++ ++ V G+ Sbjct: 104 GEADFLPGLVVDKYEDVLVVECLA----LGMEQFKETIVSLLKEELAKDGIKVRGVYERS 159 Query: 477 LVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQM 536 + + K + E +E+ E V++ + TG FLD + R + ++ Sbjct: 160 DANERTKEGLPKVKGFIGEEFDTNVEIKENGVRYLVDVVNGQKTGFFLDQKYNRLAMQRI 219 Query: 537 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQA 596 KGK L+ F++ G+ ++AG+ GA T +D+S ++ A N R NGL H A Sbjct: 220 CKGKKVLDCFTHMGTFALNAGIAGAADVTGLDISEYAVQQANENARRNGLEDTVH-FRCA 278 Query: 597 DCLAW---LREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIM 653 + L L ++ EQ+D++ +DPP F+ S+ + + + + + +L++ GG + Sbjct: 279 NVLDELPKLAQSGEQYDVVILDPPAFTKSR--QATKNAIKGYREINMKGLKLVKDGGYLA 336 Query: 654 FSNNKRGFRMDL------DGLAKLGLKAQEITQKTLSQDFAR 689 + +L + + +++ +T + D Sbjct: 337 TCSCSHFMTQELLAKTVKEAAKAAHKRLRQVEFRTQAPDHPI 378 Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 2/58 (3%) Query: 256 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL--PKGPYGTVLSNPP 311 + G D +Q+A NAR G+ + + F +V L Y V+ +PP Sbjct: 245 ADVTGLDISEYAVQQANENARRNGLEDTVHFRCANVLDELPKLAQSGEQYDVVILDPP 302 >UniRef50_Q2LSE2 SAM-dependent methyltransferase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSE2_SYNAS Length = 401 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 78/307 (25%), Positives = 123/307 (40%), Gaps = 16/307 (5%) Query: 393 EDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQEYAPPKTID 451 + R+R + RL +A+ + VDRY D +V T Sbjct: 83 HFWRERVRFAEALRRRILP-PDTTACRLINAEGDGLPGLIVDRYDDVLVCSI----ATAG 137 Query: 452 AHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLG--EKGEFLEVTEYNAH 509 K R + D + S GI R + G E+G+ + V E + Sbjct: 138 MEKNRTAVLDALTGVCSPRGIYERSEGRARRLEGLEERSGWIYGSCEEGKRIPVRENGLY 197 Query: 510 LWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDM 569 V++ TG FLD R R+ + +S+G LN FSY+G+ +V+A GGA +VD+ Sbjct: 198 FEVDIVGGQKTGFFLDQRSNRKGVAGLSRGMTLLNCFSYSGAFSVYAARGGAERVVSVDV 257 Query: 570 SRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAF 629 S + A +L+ NG + H +I+AD +WLRE E FD I +DPP F+ S++ D Sbjct: 258 SEGANDMARFHLKKNGFSTERHPVIRADVFSWLRETEEVFDGIILDPPAFAKSRK--DIA 315 Query: 630 DVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLD------GLAKLGLKAQEITQKTL 683 R + + + L+ GG + + L G Q + Sbjct: 316 RSARGYKDINLQAMKHLQNGGLLWTFSCSSFMDEALFQKVVLGAACDTGKSVQLLKILGP 375 Query: 684 SQDFARN 690 D + Sbjct: 376 GPDHPTS 382 >UniRef50_A8ZX82 Putative uncharacterized protein n=2 Tax=Desulfobacteraceae RepID=A8ZX82_DESOH Length = 325 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 124/320 (38%), Positives = 179/320 (55%), Gaps = 12/320 (3%) Query: 386 SKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYA 445 K A NR +K + +K ++ IE +R+YD D+PE VD YA +VV EY Sbjct: 10 EKYRHQAHMLANRAKKQYRHLKKRFARQNIEVFRIYDWDIPEIRAVVDWYAGHLVVGEYT 69 Query: 446 PPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQK-GKNQYQKLGEKGEFLEVT 504 ++ L + AA L + P K+ LKTR G+ +Y++L + ++ Sbjct: 70 RKQSTP-----DWLPMMGAAVAEALEVPPAKVHLKTRRTGTQGQKRYERLARTERKIVMS 124 Query: 505 EYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARST 564 E + +VNL DY+DTGLF DHR RRM+ +M+ GKDFLNLF Y+G+ T +A GGARST Sbjct: 125 ERDFKFYVNLDDYVDTGLFSDHRDTRRMVREMADGKDFLNLFCYSGTFTCYAARGGARST 184 Query: 565 TTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA---NEQFDLIFIDPPTFSN 621 T+VD SRT + WA N+ LN + + H L+QA +L +A +FDL +DPP+F+ Sbjct: 185 TSVDRSRTAIRWARENMALNSIPSKGHTLVQAHVFDFLEKAAADARRFDLAIVDPPSFAT 244 Query: 622 SKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQK 681 S+ D+ +DH L++ L++ GGTI+FS N + F ++ L G QEIT Sbjct: 245 SRDGAHNMDIVKDHPRLLEMTVALMKPGGTILFSTNHQAFAPRMERLGVAG--IQEITSA 302 Query: 682 TLSQDFA-RNRQIHNCWLIT 700 T +D+ R IH CW IT Sbjct: 303 TTPEDYRNRKTPIHRCWKIT 322 >UniRef50_C8W8S0 SAM-dependent methyltransferase n=2 Tax=Atopobium RepID=C8W8S0_ATOPD Length = 439 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 68/364 (18%), Positives = 134/364 (36%), Gaps = 51/364 (14%) Query: 370 LDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWA-------RQEGIECYRLYD 422 L V T ++ + ++ ++ K + + C R+ Sbjct: 65 LLSEMSKIRVRIVTRNANDRLNEAFWSRKISWAWKHRKTIMGNRALPGTESDTNCCRVIF 124 Query: 423 ADLPE-YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATIS-----VLGIAPNK 476 ++ + VDRY + +V Q T+ + R ++ ++ +S + GI Sbjct: 125 SEADGFPGLIVDRYENVLVAQV----GTVGMERLRNVIYPLLLEVLSSDGQVIDGIYERN 180 Query: 477 LVLKTRERQKGKNQYQKLGEKGEF---------------LEVTEYNAHLWVNLTDYLDTG 521 + + + G + + TE ++L + TG Sbjct: 181 DSPSRLKEGLPQYKGWWTGTSPDENGLIAESSLTSPSTHVLATENGLKFNLDLENSQKTG 240 Query: 522 LFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNL 581 FLD + RR + Q+++G L+ F + G ++A GGA VD+S+T ++ A +N Sbjct: 241 FFLDQKYNRRAVRQLAQGHRVLDCFCHVGPFGLNATAGGADFVRCVDVSQTAIDLARQNA 300 Query: 582 RLNGLTGRAHRLIQADCLAW----------LREANEQFDLIFIDPPTFSNSKRMEDAFDV 631 LNGL R A+ L + L+ FDLI +DPP F+ ++ + Sbjct: 301 ELNGLADR-IDFTCANVLEYLPELARDRTQLKAEGGPFDLIILDPPAFTKTR--DKVRSA 357 Query: 632 QRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL------DGLAKLGLKAQEITQKTLSQ 685 R + + +LL GG + + DL + ++ ++I ++ + Sbjct: 358 MRGYKEINATAMKLLPRGGYLATCSCSHFMTRDLLAQAIAEAAHHTNVQLKQIEERQQAP 417 Query: 686 DFAR 689 D Sbjct: 418 DHPI 421 Score = 43.4 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 9/61 (14%) Query: 260 GSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL---------PKGPYGTVLSNP 310 D I AR NA L G+ + I F +V + L GP+ ++ +P Sbjct: 285 CVDVSQTAIDLARQNAELNGLADRIDFTCANVLEYLPELARDRTQLKAEGGPFDLIILDP 344 Query: 311 P 311 P Sbjct: 345 P 345 >UniRef50_UPI00016C4550 methyltransferase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4550 Length = 395 Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats. Identities = 74/329 (22%), Positives = 128/329 (38%), Gaps = 20/329 (6%) Query: 372 CVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIEC-YRLYDADLP-EYN 429 Q HV + + + + NRL L+ + G + YR+ ++ Sbjct: 56 NSQSKIHVRLYSWEENVPLDEAFFRNRLATALRLRHDVLKLNGPDAGYRVCFSESDYLSG 115 Query: 430 VAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKN 489 + VDRY DW+ VQ A + R+ + + ++ GI + + Sbjct: 116 MVVDRYGDWLTVQFTA----LGIASRRETIVSALRELLNPKGIYLRTEKGVGKLEGVELH 171 Query: 490 QYQKLGEKGEF-LEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSY 548 GE L + E VNLT+ TG +LD R R + +++ GK FL+ F Y Sbjct: 172 DQLLWGEPPPPDLSILENGMRFLVNLTEGQKTGYYLDQRDNRAAVARLAPGKRFLDAFCY 231 Query: 549 TGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW---LREA 605 +G +HA GA +D S LE A RN LNGL + + L + Sbjct: 232 SGGFGLHAARAGAAEVLCLDGSEPALELARRNAALNGLEN--VAFERVNVFNHLGTLATS 289 Query: 606 NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRM-D 664 +FD++ +DPP F+ ++ + + + L + +LL G ++ M D Sbjct: 290 GRKFDVVVLDPPKFARNRGA--IPEALKGYRRLHQLALKLLAPDGVLVSCCCTGLITMLD 347 Query: 665 LDG-----LAKLGLKAQEITQKTLSQDFA 688 L+ + Q + ++ + D Sbjct: 348 LEEMLAQVAVEAKRDVQIVERRGPAPDHP 376 >UniRef50_A3J3C9 Putative uncharacterized protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J3C9_9FLAO Length = 388 Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats. Identities = 66/317 (20%), Positives = 125/317 (39%), Gaps = 21/317 (6%) Query: 387 KPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQEYA 445 + + ++L+ + K E +R+ + + +D Y V+Q ++ Sbjct: 71 DESFSENFWASKLQSAWELRWKLLDLEVTNAFRVIHGEGDGIPGLIIDYYDKNWVIQAHS 130 Query: 446 PPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKG-KNQYQKLGEKGEFLEVT 504 + + + + S + K+ Y G + E + Sbjct: 131 TGIFLQMEQIAEAIK-------SNFSTYCETIYCKSSGTLPNIGTDYFLFGNRAEAV-AK 182 Query: 505 EYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARST 564 E N VN + TG FLD R R++LG+ SKGK LN F YTG +++A GA Sbjct: 183 ENNILFSVNWVEGQKTGFFLDQRENRKLLGEFSKGKKVLNTFCYTGGFSIYAMSSGAELV 242 Query: 565 TTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKR 624 T+VD+S+ ++ A N+ LN H+ + D +++E +Q+D+I +DPP F+ S + Sbjct: 243 TSVDISQKAVDLAASNMELN-FPNANHKAVADDVFNFMKEHTQQYDVIILDPPAFAKSIK 301 Query: 625 MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL------DGLAKLGLKAQEI 678 + + + L + L G + + + L + G + + Sbjct: 302 SKHT--ATQAYKRLNIAGLKALAPNGILFTFSCSQVIDDVLFYNTVAAAAIETGRNIRVL 359 Query: 679 TQKTLSQDFARNRQIHN 695 + D N I++ Sbjct: 360 HKLEQGPDHPTN--IYH 374 >UniRef50_C7RKQ3 PUA domain containing protein n=3 Tax=Proteobacteria RepID=C7RKQ3_9PROT Length = 396 Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats. Identities = 77/330 (23%), Positives = 119/330 (36%), Gaps = 18/330 (5%) Query: 371 DCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YN 429 + T D + + + + + + G + RL + Sbjct: 54 WSPESKIRARVWTFDPDEIIDDVFFKRHVHAAVARRQAMPDLRGQDGLRLIHGESDGLPG 113 Query: 430 VAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKN 489 + VDRY D +VVQ A K R+ + + I R Sbjct: 114 LIVDRYGDTLVVQLTAT----GPEKWRRAILAALREASGCARIYERSDSDVRRLEGLEPV 169 Query: 490 QYQKLGEKG-EFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSY 548 GE E L + E + V++ TG +LD R R + +++ G+ LN F Y Sbjct: 170 TGWVFGEAPAEPLVIVENGVRIGVDVVAGHKTGFYLDQRDNRLLTRELAGGRTVLNCFCY 229 Query: 549 TGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLN-GLTGRAHRLIQADCL---AWLRE 604 TG ++ A GGA S ++D S L A NL N L QAD L+ Sbjct: 230 TGGFSLQALAGGATSVLSIDSSGPALSTAVDNLARNPELAADRAEWRQADVFSELRVLKS 289 Query: 605 ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD 664 A +FDLI +DPP F+ S + A R + + RLL GG +M + G R + Sbjct: 290 AGHRFDLIILDPPKFAPS--AQHAERAARAYRDINVCAFRLLNPGGLLMTYSCSGGIRSE 347 Query: 665 L------DGLAKLGLKAQEITQKTLSQDFA 688 D G + + + + D Sbjct: 348 HFQQIVTDAAIDAGQQTRLLHRLAAPADHP 377 >UniRef50_A0LJE8 SAM-dependent methyltransferase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LJE8_SYNFM Length = 389 Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats. Identities = 76/338 (22%), Positives = 130/338 (38%), Gaps = 18/338 (5%) Query: 359 ADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECY 418 + K+ G ++ + E ++ LR+ +K G C+ Sbjct: 43 SSKRVPLGRGYINPR--SLIAVRLVTGPGQEPTREFFSELLRRAEEKR-TLLYYPGSTCH 99 Query: 419 RLYDADLPE-YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKL 477 R+ + + VDRY D +V+Q T+ + + + +++ I Sbjct: 100 RVVFGESDGIPGLIVDRYGDVLVIQV----TTLGMARMQSLIQELMVELFRPAAIVCRND 155 Query: 478 VLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMS 537 R + GE E + V L V+ TGLFLD R RR L + Sbjct: 156 TSVRRLEGLPLEKGLAFGELPEDIRVNIDGLELRVDPLGGQKTGLFLDQRDNRRALLRWI 215 Query: 538 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQAD 597 GK L+LF YTG+ + A GGA VD S ++ A N N + R I+++ Sbjct: 216 GGKRVLDLFCYTGAWGLAAARGGASRVVGVDASAEAVDQARSNAAANNVADRC-EFIRSE 274 Query: 598 CLAWLREANE-QFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSN 656 L +LR + FD+I +DPP F+ +K + Q+ + L + L GG ++ + Sbjct: 275 ALQYLRTLRKGDFDVIVLDPPAFAKTKSA--LPEAQKGYTDLNRRALLALAPGGLLVTCS 332 Query: 657 NKRGFRMDLDGLAKL------GLKAQEITQKTLSQDFA 688 +L A L G + + + + + D Sbjct: 333 CSYHMSEELFARALLQAARAGGRQLRLMESRGQAPDHP 370 Score = 47.6 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 25/55 (45%) Query: 257 HFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPP 311 G D+ A + +AR+NA + + F + Q L KG + ++ +PP Sbjct: 241 RVVGVDASAEAVDQARSNAAANNVADRCEFIRSEALQYLRTLRKGDFDVIVLDPP 295 >UniRef50_C0ZB58 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=C0ZB58_BREBN Length = 431 Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats. Identities = 67/354 (18%), Positives = 133/354 (37%), Gaps = 56/354 (15%) Query: 383 TPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLP-EYNVAVDRYADWVVV 441 + D K + + + ++++ + ++ R+ + + VDRY D +VV Sbjct: 66 SYDQKEEIDYDFFLRKIKEAAEFRTRFVDNP--RACRVIYGEADFLPGLIVDRYEDTLVV 123 Query: 442 QEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFL 501 Q + + K + D + + GI V + + GE + Sbjct: 124 QVLS----LGMEKRIDWIRDALVEVFAPTGIYLRNDVPVRELEGLTQGKEVLYGECPREV 179 Query: 502 EVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKG---------------------- 539 + E +V++ + TG F D R R + + KG Sbjct: 180 LIEENGLKYYVDIVEGQKTGFFYDQRENRASIAPLMKGWGEKHGISLTSMEVDGETKQVP 239 Query: 540 ---------------KDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLN 584 + L F++TGS T++A GA+ T +D+S +E A+RN+ LN Sbjct: 240 VDKRGKAVKNPFWDGAEVLECFTHTGSFTLNACKHGAKKVTALDISEHAIETAKRNITLN 299 Query: 585 GLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKD 641 G R + A+ +LR EA + +D++ +DPP F+ S+ R + + + Sbjct: 300 GFLHR-VDFVVANAFDYLRENVEAGKSWDVVILDPPAFAKSRGA--VKGACRGYKDINLN 356 Query: 642 LKRLLRAGGTIMFSNNKRGFRMDL------DGLAKLGLKAQEITQKTLSQDFAR 689 +L+R GG ++ ++ +L + + I + +D + Sbjct: 357 GMKLVRQGGFLVTASCSYHMSPELFLQTIQEAAVDAKKILRLIEWRGAGKDHPQ 410 >UniRef50_B0SEV3 SAM-dependent methyltransferase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SEV3_LEPBA Length = 327 Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats. Identities = 133/315 (42%), Positives = 191/315 (60%), Gaps = 9/315 (2%) Query: 393 EDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDA 452 + NRLRK K+ EKWA++E I CYR+Y D+P+ +DRY + +V+ + + + Sbjct: 10 TMFENRLRKLKKEREKWAKRENINCYRIYSEDIPQIPFILDRYPNGLVLYDKSSLRFQAE 69 Query: 453 HKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWV 512 RL +I+ + V I NKL LK R++QKG +QY+K +G F TE N + Sbjct: 70 TDHDARLKEIVRIVMEVFQIPENKLFLKQRKKQKGLDQYEKFSIEGNFFWTTEANLEFRI 129 Query: 513 NLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRT 572 NL+DYLDTGLFLDHRI R L + SK K LNLFSYTG+ +V+A GGA T ++D+S+T Sbjct: 130 NLSDYLDTGLFLDHRITRSWLKEKSKNKSVLNLFSYTGAFSVYAASGGASKTKSIDLSKT 189 Query: 573 YLEWAERNLRLNGLTGRAHRLIQADCLAWLREA-----NEQFDLIFIDPPTFSNSKRMED 627 Y +WA +NLR NG G H++I AD L W+ E E++D IF+DPPTFSNSK+M + Sbjct: 190 YCDWAVQNLRRNGFEGSNHKIINADILKWIEEESKNPNRERYDFIFLDPPTFSNSKKMYE 249 Query: 628 AFDVQRDHL-ALMKDLKRLLRAGGTIMFSNNKRGFRM--DLDGLAKLGLKAQEITQKTLS 684 ++VQ H L+ L + L G I FS N R F+M + + + G + T++++ Sbjct: 250 EWEVQTKHRNLLLLLLTKFLSDKGEIWFSTNFRKFKMEVEEEEWKERGYQCLNRTKESIP 309 Query: 685 QDFARNRQIHNCWLI 699 DF R+ +IH + I Sbjct: 310 PDF-RDEKIHQLFCI 323 >UniRef50_Q3ITL0 Putative uncharacterized protein n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3ITL0_NATPD Length = 360 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 102/378 (26%), Positives = 159/378 (42%), Gaps = 20/378 (5%) Query: 3 SLFASTARGLEELLKTELENL-GAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61 L A+T GLE + EL L GA + +G V F+G VY+ +R RIM L Sbjct: 2 QLLATTNGGLESVAAAELRELTGAEATRHHRGVVAFEGTVEDVYELHYRARSLHRIMAVL 61 Query: 62 GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121 + V D+Y + + P ATF V + S A +V A++DA+ Sbjct: 62 VDTPVAGLDDIYATTADMPVADRL-PEATFGVVGTRHGTHEFTSMDVADRVGQAVIDAYR 120 Query: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181 R VD D P +R+ +L+ E ++A+DL+G+ LH R YR AP++ TLA + Sbjct: 121 EATGTRLPVDLDDPTVRLEAYLYDERFTLAVDLTGESLHRRPYRVCEHDAPLRGTLAYQL 180 Query: 182 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKA 241 + + + L+DPM GS T+ IEAA+ ATD P F+ + D Sbjct: 181 LRLADYSADDRLVDPMAGSATIPIEAALDATDAVPRPDLDP-AFTVLPRFDGDR------ 233 Query: 242 EAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKG 301 + RA E + D+ + + AR N AG + + D + + Sbjct: 234 FRRRRAAHTRREAAVDITARDNQTQWRECARENREAAGFEDEVDIVAADAREASL----- 288 Query: 302 PYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADK 361 V++N P+G R+ L L+S + + L + P L L L D+ Sbjct: 289 DADCVVTNLPFGIRVT--GDLRRLYSEFAERVTDGSVD-RLVALTTKPGL---LPLSPDE 342 Query: 362 QYKAKNGPLDCVQKNYHV 379 Q+ G +D + Sbjct: 343 QHDIPYGRIDASVIVWRR 360 >UniRef50_C9L1Z6 PUA domain protein n=33 Tax=Bacteria RepID=C9L1Z6_9BACE Length = 330 Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 66/323 (20%), Positives = 117/323 (36%), Gaps = 16/323 (4%) Query: 382 STPDSKPAMVAEDYTNRLRKNLKKFEKW--ARQEGIECYRLYDADLP-EYNVAVDRYADW 438 + + + + +L A YRL + + +D YA Sbjct: 1 MLSFQQEPINHDFWKRKLEIAYDMRRSIGIATNPANNTYRLVHGEGDNLPGLVIDVYAKT 60 Query: 439 VVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKG 498 V+Q ++ +D + L +++ I I + G Sbjct: 61 AVMQAHSAGMHVDRMVIAEALSEVMGDQIE--NIYYKSETTLPFKADLFPENGFLKGGSN 118 Query: 499 EFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGL 558 + + EY V+ TG F+D R R +L + +KG+ LN+F YTG + +A Sbjct: 119 DNI-AQEYGLKFHVDWLKGQKTGFFVDQRENRSLLERYAKGRSVLNMFCYTGGFSFYAMR 177 Query: 559 GGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPT 618 GGA+ +VD S ++ +N+ LN H D +L +Q+DLI +DPP Sbjct: 178 GGAKLVHSVDSSAKAIDLTNKNVELNFPGDLRHEAFAEDAFKYLDRMGDQYDLIILDPPA 237 Query: 619 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD------LDGLAKLG 672 F+ K + + + L ++ GG + + + D A G Sbjct: 238 FAKHKDALR--NALQGYRKLNAKAFEKIKPGGILFTFSCSQVVSKDNFRTAVFTAAAMSG 295 Query: 673 LKAQEITQKTLSQDFARNRQIHN 695 + + Q T D N I++ Sbjct: 296 RSVRILHQLTQPADHPVN--IYH 316 >UniRef50_Q39XD7 SAM-dependent methyltransferase n=4 Tax=Desulfuromonadales RepID=Q39XD7_GEOMG Length = 397 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 77/370 (20%), Positives = 133/370 (35%), Gaps = 25/370 (6%) Query: 335 NQFGGWNLSLFSASPDLLS--CLQLRADKQYKAKNGPLDCVQKNYHV----AESTPDSKP 388 + G + +FS + + Y G L N H + + + Sbjct: 18 RRIKGGHPWVFSNEIREAKGERIPGATAEVYDVGGGFLGTGYYNPHSLIAVRLLSREREE 77 Query: 389 AMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLP-EYNVAVDRYADWVVVQEYAPP 447 + R+ + LK +R+ + + VD+Y D + VQ Sbjct: 78 IDSPAFFKERINQALKLRRSLYPDMAT--FRVVHGEGDFLPGLVVDKYGDRLSVQILTA- 134 Query: 448 KTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYN 507 R + + + + GI V + E E +E E+ Sbjct: 135 ---GIEARRGAIVEALVELFAPKGIIARNDVAVRSLEGLAETVEILYREIPETVEAEEHG 191 Query: 508 AHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTV 567 V+L TG FLD + +L M+ GK L+ FSY+GS VHA GA T + Sbjct: 192 LRFRVDLAGGQKTGHFLDQKENHLVLKGMAAGKRVLDCFSYSGSWGVHAAAFGAAEVTCL 251 Query: 568 DMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA---WLREANEQFDLIFIDPPTFSNSKR 624 D+S A N LNGL G + D LR +FD++ +DPP F +K+ Sbjct: 252 DISERAAALARENAALNGLEG-VVSVEVCDAFDRLRSLRHEGRRFDVVVLDPPAFVKNKK 310 Query: 625 MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL------DGLAKLGLKAQEI 678 + ++ +L + + LL AGG ++ + +L + G + + + Sbjct: 311 ALK--EAEKGYLTINRRGLELLDAGGYLITCSCSYHMGRELFRDLLAQAARQAGRQVRIV 368 Query: 679 TQKTLSQDFA 688 ++ + D Sbjct: 369 ETRSQAPDHP 378 >UniRef50_C0QT70 Methyltransferase n=2 Tax=Hydrogenothermaceae RepID=C0QT70_PERMH Length = 394 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 65/340 (19%), Positives = 132/340 (38%), Gaps = 22/340 (6%) Query: 365 AKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDAD 424 G ++ V + K + + R+ K +K + + + R+ ++ Sbjct: 50 LGTGYINPE-SKISVRVLSFFKKKDIDFDFIKERILKAYRKRYRLLEK--TDAVRVVHSE 106 Query: 425 LPE-YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRE 483 + VD Y ++ VQ + R+ + + GI + Sbjct: 107 ADGLPGLIVDLYDRYLSVQINTA----GMERFRENIIKALIDIFEPEGIVEKSDEKSREK 162 Query: 484 RQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSK-GKDF 542 G+ E + + E ++ L TG +LD RI R ++ + K G Sbjct: 163 EGLKTENKVVYGKVPESIVIHENGVKFYIQLEKGQKTGFYLDQRINRFIVSEYIKEGDSV 222 Query: 543 LNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL 602 L+LFS G ++AG+ GA+ T VD+S+ + ++N LNG+ + + + + + +L Sbjct: 223 LDLFSNAGGFGIYAGIKGAKDITFVDISKNAVSLIDKNCELNGI--KGYTVYRENVFKFL 280 Query: 603 REAN---EQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 659 ++ +++DLI +DPP+F+ ++ + D R L+ +L GG + + Sbjct: 281 TDSGSMDKRYDLIILDPPSFAKNR--YEVKDAIRGFKFLISRSLEILNDGGFLAVFSCSY 338 Query: 660 GFRMD------LDGLAKLGLKAQEITQKTLSQDFARNRQI 693 +D LD + A+ + +D I Sbjct: 339 HVSLDDLKKTVLDVSKNMRCGAEIVKHLYQDEDHPYILNI 378 >UniRef50_B7FV41 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FV41_PHATR Length = 710 Score = 271 bits (694), Expect = 6e-71, Method: Composition-based stats. Identities = 90/447 (20%), Positives = 163/447 (36%), Gaps = 62/447 (13%) Query: 6 ASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGE-C 64 + GLE +L EL+ LG V + + ++ AS+++L G Sbjct: 263 VTCHPGLETVLSQELDALGIAHKIERNCAVLTNANLDTILSCHLYLGSASQVLLQCGTPF 322 Query: 65 KVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGL-NDTIRNSQYGAMKVKDAIVDAF--- 120 +L V+ + W + A V + +S ++ D I + Sbjct: 323 TARGLPELQRKVEKLPWKNLIKTDAEVQVKVQATFKSKLLHSTAIRDRIIDGIKLSLGVL 382 Query: 121 --------------------TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLH 160 P+ P + + V + ++ ++L S LH Sbjct: 383 KKNPESDSSKSLERVPLKVPQESKGPKNEDGSQGPAVALTVRVMRDQVYLSLATSLTPLH 442 Query: 161 LRGYRDRAGIAPIKETLAAAIVMRSGWQPG------------TPLLDPMCGSGTLLIEAA 208 RGYR +G AP++E LA A++ SGW+P L+DP CGSGT+ IEAA Sbjct: 443 QRGYRLESGKAPLREDLAYAMLYNSGWKPPSAARGESDTIAYDALVDPFCGSGTIAIEAA 502 Query: 209 MLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 268 +A PG R G +D A W ++ ++ + SD +A + Sbjct: 503 CMAAGLPPGRLRSA-PLEGTLFYDPAKWSKIV--MKSLRESSSQTNETKIVCSDRNAGAV 559 Query: 269 QRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYG------TVLSNPPYGERL------ 316 + A+ NA+ AGI +++ + + L G + N P+G+R+ Sbjct: 560 KIAKANAKRAGIPDMLDIQECAFTK-HPWLDVYQKGVKPRSLLIAGNLPFGQRISPSKSS 618 Query: 317 --DSEPALIALHSLLGRIMK-----NQFGGWNLSLFSASPDLLSCLQLRADKQ--YKAKN 367 +P + L+ L I+K + G N+ L + +L+ + K+ Sbjct: 619 SSKKKPQFLPLYQSLSTIVKSYGDQSNGGTCNIVLLTNDWNLVQRGAFPGSVKQGLGFKH 678 Query: 368 GPLDCVQKNYHVAESTPDSKPAMVAED 394 G +D + + + + + Sbjct: 679 GGIDVSTALINSSSGETEDNESTEKQP 705 >UniRef50_B5EPR2 Methyltransferase small n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EPR2_ACIF5 Length = 407 Score = 271 bits (692), Expect = 9e-71, Method: Composition-based stats. Identities = 77/330 (23%), Positives = 119/330 (36%), Gaps = 19/330 (5%) Query: 372 CVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNV 430 + D + Y +RL++ L+ E+ G YRL + + Sbjct: 64 NPHTLLCARLLSRDPHVRIDEGFYRSRLQQALRMRERLF---GAPFYRLVHGEGDGLPGL 120 Query: 431 AVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQ 490 +DRY D +V+Q ++ + + + + GI R Sbjct: 121 VIDRYEDHLVLQ----AGSLGMDRDLPLITAALQGLLRPAGILLKASGAARRLEGLEDRV 176 Query: 491 YQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTG 550 G E LEV E + V+ TG F DHR RR L ++G+ L+ F+Y G Sbjct: 177 EVLFGHIPERLEVWENDCLFQVDPRGGQKTGWFYDHRANRRRLRDFAQGRRVLDCFAYLG 236 Query: 551 SATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW---LREANE 607 + GA + T VD S L E N R N + G I D + LR+ E Sbjct: 237 GFAIPLAKAGASAVTAVDSSAPALAILEENARRNEVEG--LHSIHGDAMETLHNLRDRGE 294 Query: 608 QFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLD- 666 QFDLI +DPP SK+ D + + RLL GG + ++ + Sbjct: 295 QFDLIVLDPPALIKSKK--DFKEGSIAYRRFNDMAMRLLTPGGILFSASCSHHLSRETLL 352 Query: 667 ---GLAKLGLKAQEITQKTLSQDFARNRQI 693 A Q I + + D + + Sbjct: 353 SQIAFAAQRGDYQIIGEGSQDMDHPVHPAV 382 >UniRef50_Q31EI2 SAM-dependent methyltransferase n=17 Tax=Gammaproteobacteria RepID=Q31EI2_THICR Length = 398 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 68/339 (20%), Positives = 115/339 (33%), Gaps = 19/339 (5%) Query: 367 NGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIEC--YRLYDAD 424 NG V + K + + R+ + YRL + Sbjct: 50 NGKAIGVAYVNPNTLICGRLLSRNPKVQFNQAFLKKRIQAAQALREANFDAPFYRLVFGE 109 Query: 425 LPE-YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRE 483 + +DR+ D V Q ++ L I + Sbjct: 110 SDGLPGLVIDRFGDVFVAQITTA----GMETLKEELVQTIENLYHPQALVLRNDSPSREL 165 Query: 484 RQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFL 543 +G E + + E A + + TG F DHR+AR L K K L Sbjct: 166 EGLSLYTEVAIGPLPEEIVIEENGAKFAIPTENGQKTGWFYDHRMARGRLQDFVKDKTVL 225 Query: 544 NLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLI--QADCLAW 601 ++FSY G + A + GA+ T VD S L+ +RN LNG+ + + D L Sbjct: 226 DVFSYLGGWGIEAAVAGAKEVTCVDASTFALDGVDRNAELNGVAEKVITIEGNAFDVLKA 285 Query: 602 LREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGF 661 L ++D++ +DPP F K+ D + + + RLL G ++ ++ Sbjct: 286 LATEAHKYDVVIVDPPAFVKRKK--DFKAGADGYRRINELAMRLLNPDGILVSASCSHHM 343 Query: 662 RMDLDGLAKLGLKAQEITQ-------KTLSQDFARNRQI 693 D L ++ L ++ I + D + I Sbjct: 344 SRD-ALLQQIQLASRHIDRNIQMFDQGHQGPDHPIHPAI 381 >UniRef50_D2R1D4 Methyltransferase small n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R1D4_9PLAN Length = 434 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 72/342 (21%), Positives = 124/342 (36%), Gaps = 22/342 (6%) Query: 363 YKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEG--IECYRL 420 NG + + E + + E A RL Sbjct: 70 RGFYNGQSRIRVRLFTWREEEQLNADFFERRIADAIESRVQLGLEPAAGSPARSTSAARL 129 Query: 421 YDADLPE-YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVL 479 ++ + VDRY D++VVQ + + + +I+ ++ G+ Sbjct: 130 IFSEADGLSGLVVDRYGDYLVVQATSAA----MQQRLHGIAEILQKLLAPKGMVLRGDAA 185 Query: 480 KTRERQKGKNQYQKLGE-KGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSK 538 + ++LGE E + + E+ V+LTD TG +LD R R + + Sbjct: 186 SAKLEGIEPIAPERLGEWTDEPIRIVEHGISYEVDLTDSQKTGFYLDQRDNRLAVAKYFA 245 Query: 539 GKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQAD 597 G+ L++F YTG ++A G A VD S+ + A++N +NGLT D Sbjct: 246 GRKVLDMFCYTGGFAMNASRHGQAAEVLGVDTSKRAVAQAQKNAEINGLTN--VTFEAGD 303 Query: 598 CLAWLRE---ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMF 654 L + +FD I +DPP F+ S+ D + + L + LL GG ++ Sbjct: 304 GFQSLEKFATEGRKFDAIVLDPPKFARSRSQVD--QAIQAYHRLNRAAVALLPPGGILVT 361 Query: 655 SNNKRGFRMDLDGL------AKLGLKAQEITQKTLSQDFARN 690 + + L K G Q I + + D + Sbjct: 362 HSCSGSVSREDFLLMLSGVAQKTGRDIQIIELRGAAADHPVS 403 >UniRef50_O67850 Putative uncharacterized protein n=2 Tax=Aquificaceae RepID=O67850_AQUAE Length = 391 Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 69/335 (20%), Positives = 136/335 (40%), Gaps = 22/335 (6%) Query: 365 AKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDAD 424 G ++ N + + D + E R+++ + ++ YRL ++ Sbjct: 49 LGYGYINPE-VNIAIRILSFDKNEPVTPELIRKRIKQAYEYRKRLYI--NSNAYRLVHSE 105 Query: 425 LPE-YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRE 483 + VD Y ++ V+ T ++ R+ + D + + GI + R Sbjct: 106 GDLLPGLIVDVYGSYLAVEF----TTYGMNQFREVILDTLVELLRPKGIYEKVNEIAKRV 161 Query: 484 RQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMS-KGKDF 542 + GE E + + E++ ++N+ TG FLD R AR+ + + G Sbjct: 162 EGLDVEERVIYGEVPEEVIIWEHDLKYYINIPQGQKTGFFLDQRNARKFVRNLVEPGDRC 221 Query: 543 LNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL 602 L++F +TG ++ GA VD+S L+ AE+N RLNG T + ++A+ +L Sbjct: 222 LDVFCHTGGFALNMKRAGAGEVIGVDISELALKEAEKNARLNGFTD--IKWVKANAFDYL 279 Query: 603 R---EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 659 R + E+FD+I IDPP+F+ ++ + R + L ++ ++GG + + Sbjct: 280 RELDKKGEKFDVIIIDPPSFAKNRAA--VPNALRGYKELCVRGLKIAKSGGYLAIFSCSF 337 Query: 660 GFRMD------LDGLAKLGLKAQEITQKTLSQDFA 688 L + + + I + D Sbjct: 338 HITEQHLLDVLLQASYDVRRQVRVIAKTFQDLDHP 372 Score = 41.8 bits (97), Expect = 0.093, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 5/103 (4%) Query: 256 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK--GPYGTVLSNPP-Y 312 G D ++ A NARL G + I + + L K + ++ +PP + Sbjct: 241 GEVIGVDISELALKEAEKNARLNGFTD-IKWVKANAFDYLRELDKKGEKFDVIIIDPPSF 299 Query: 313 GERLDSEPALIALHSLLG-RIMKNQFGGWNLSLFSASPDLLSC 354 + + P + + L R +K G L++FS S + Sbjct: 300 AKNRAAVPNALRGYKELCVRGLKIAKSGGYLAIFSCSFHITEQ 342 >UniRef50_Q025J5 SAM-dependent methyltransferase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q025J5_SOLUE Length = 387 Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 75/368 (20%), Positives = 128/368 (34%), Gaps = 25/368 (6%) Query: 336 QFGGWNLSLFSASPD----LLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMV 391 + G + +F++ D ++ Q G + + Sbjct: 13 RVAGGHPWIFASDIDDRDGAQGGHAVKVADQRGHPLGTAHYSSASQITLRMLSRQIEEIG 72 Query: 392 AEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQEYAPPKTI 450 + Y +RLR + + YR+ + + VDRY D++V+Q Sbjct: 73 RDFYLHRLRAAEQHRRTVVHDS--DAYRVVHGEADLLPALVVDRYGDYLVMQTL----DQ 126 Query: 451 DAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHL 510 A+ + + GI V + + G+ E + V L Sbjct: 127 GMDAAKAEIASCLEEIFRPKGIVARNDVSVRTKEELPLESGIVAGDVPESVTVRMNGLTL 186 Query: 511 WVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMS 570 +L TG+FLD R R Q ++G L+ F+ TG +H VD S Sbjct: 187 RADLLHGQKTGIFLDQRQNYRAAAQYARGGRALDCFTSTGGFALHLAPK-CEHVEAVDSS 245 Query: 571 RTYLEWAERNLRLNGLTGRAHRLIQADCLAWL---REANEQFDLIFIDPPTFSNSKRMED 627 LE A N NG+ +AD L A QF ++ +DPP F+ +KR D Sbjct: 246 GPALEAARANSTANGIDN--IDWNEADVFDLLSGYANARRQFSMVVLDPPAFAKNKRSLD 303 Query: 628 AFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD--LDGLAKLGLK----AQEITQK 681 + + RLL+ GG ++ + L+ +A GL + + ++ Sbjct: 304 --PAISAYKEINLRAMRLLQPGGILVTCSCSHHLSEASLLELVAGAGLDTHRTLRVLERR 361 Query: 682 TLSQDFAR 689 + SQD Sbjct: 362 SQSQDHPI 369 >UniRef50_D0LIJ5 Putative RNA methylase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIJ5_HALO1 Length = 398 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 101/395 (25%), Positives = 155/395 (39%), Gaps = 34/395 (8%) Query: 9 ARGLEELLKTELENLGAVEC--------QVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP 60 + G +++ E L +V G + + + ++ + R A+R Sbjct: 12 SPGTNKVMAAEFIRLCQRAISQRPPAPRKVGSGMLVYPFEPEQARVAVHYLRTATRAQWD 71 Query: 61 LGECKVYSDLDLYLGVQ---AINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIV 117 + LY + A + + GA +V + + VK+A++ Sbjct: 72 IFRSDAPRLEPLYDELVDDVAADRRDWLWDGARISVRARNVAGFAAGERQIVGTVKNALL 131 Query: 118 DAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETL 177 D R VD PDI V+V + +++DL+G L RGYR G AP++E L Sbjct: 132 DG-AEARGIRLEVDPQHPDIHVSVRQIDDELLVSVDLAGASLSQRGYRADRGAAPLREHL 190 Query: 178 AAAIVMRSGWQPG-TPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIW 236 AA ++M + P PLLDPMCG+GT+ IEAA++A G H + + E Sbjct: 191 AAVLLMLARHDPRSEPLLDPMCGAGTIAIEAALMARAAPLGEHIHTAAYRVLPRFSE--- 247 Query: 237 QEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGI--GELITFEVKDVAQL 294 + EA A+ + G++ D R + AR NA AG+ + T+ D +L Sbjct: 248 ---RGEAPPLDAPLFADTRATVLGNELDGRTLDAARHNAHAAGLGGDDACTWLRGDFRRL 304 Query: 295 TNP-----------LPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLS 343 T G +L NPPYG RL P L L+ LG + F GW Sbjct: 305 TRKRVEERIARISDADPQRPGLILCNPPYGHRL-EPPELHRLYRDLGEWCRQ-FRGWRAG 362 Query: 344 LFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYH 378 F + D R + NG L Y Sbjct: 363 FFVGNRDFEPTFGGRPRVRKPLNNGSLAACFYLYD 397 >UniRef50_C6NWD6 LSU m5C1962 methyltransferase RlmI n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NWD6_9GAMM Length = 432 Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats. Identities = 80/344 (23%), Positives = 123/344 (35%), Gaps = 16/344 (4%) Query: 356 QLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGI 415 ++ + ++ T D + + Y RLR L Sbjct: 47 RIEDHRGQPLGLAHVNPHALLC-ARILTRDPDTQIDVDFYLRRLRDALGLRMALFSGPY- 104 Query: 416 ECYRLYDADLPE-YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAP 474 YRL + + VDRY D++V+Q + + + + I LGI Sbjct: 105 --YRLVHGEGDGLPGLVVDRYGDYLVLQTGSA----GMEQDLDLIVAALVELIRPLGILL 158 Query: 475 NKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLG 534 + + G E LEV E ++ TG F DHR R L Sbjct: 159 KGSGVARSIEGLPERIEVLAGAVPEHLEVLENGCSFLIDPRQGQKTGWFYDHRRNRHELT 218 Query: 535 QMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT-GRAHRL 593 + + G+ L+LFSY G + GA VD S + L E N R NGL+ H Sbjct: 219 KFATGRRVLDLFSYLGGFALPLARAGAVEVLAVDRSASALALLEENARRNGLSQVHGHEG 278 Query: 594 IQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIM 653 + L LR+ E FDLI +DPP S++ D D + L RLLR G + Sbjct: 279 EALETLRQLRDRAESFDLILLDPPALIKSRK--DVRDGTAAYARLNDLALRLLRPDGLLF 336 Query: 654 FSNNKRGFRMD--LDGLAKLGLK--AQEITQKTLSQDFARNRQI 693 ++ D L +A+ + + +T+ D + Sbjct: 337 TASCSYHLSRDALLQAVARGASRGSYRVLTEAGQDLDHPYPPAV 380 >UniRef50_C6IZE3 PUA domain-containing protein n=2 Tax=Bacillales RepID=C6IZE3_9BACL Length = 457 Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats. Identities = 75/400 (18%), Positives = 141/400 (35%), Gaps = 86/400 (21%) Query: 366 KNGPLDCVQKNYHVAES----TPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLY 421 +N L N + + AM + R ++ LK E++ ++ + YR Sbjct: 45 RNRYLATGYYNPASQITVRVVSYTPLEAMDTAFFVRRFQECLKHRERFVKE---DAYRFV 101 Query: 422 DADLP-EYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLK 480 + + VD++ D +VVQ T+ + R+++ + ++ + +GI V Sbjct: 102 YGEADFLPGLIVDKFGDVLVVQLL----TLGMDRCREQIVEALSEVLHPVGIYERSDVAV 157 Query: 481 TRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMS--- 537 + + G+ + V+E + V++ TG F D R R + + Sbjct: 158 REMEGLEQVKGPIFGQPPRHVIVSENGLKIEVDIEQGQKTGYFFDQRENRASIKPLMTGW 217 Query: 538 -----------------------------------KGKDFLNLFSYTGSATVHAGLGGAR 562 G L FS+TGS T+HA GA+ Sbjct: 218 GGRSGITLQELPTEDGGVRLAPVNRNGKEVTFPYWDGATVLECFSHTGSFTLHACKYGAK 277 Query: 563 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA----------------- 605 T +D+S +E A+RN+ LNG T R + AD +LR Sbjct: 278 KVTCLDISEHAIESAKRNVELNGFTDR-VEFVVADAFDYLRSQVKGLEERARRAAQDAKV 336 Query: 606 ----------NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFS 655 +D++ +DPP F+ +K R + + +L+ GG ++ + Sbjct: 337 DTSVPLTAGGGRTWDVVILDPPAFAKTKAA--VKGAVRGYKDINLHGMKLVNEGGYLVTA 394 Query: 656 NNKRGFRMD------LDGLAKLGLKAQEITQKTLSQDFAR 689 + R D L+ G + + + +D + Sbjct: 395 SCSYHMRPDLFLETILEAAEDAGKVLRLVEWRAAGKDHPQ 434 >UniRef50_Q11NR8 SAM-dependent methyltransferase n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11NR8_CYTH3 Length = 393 Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats. Identities = 78/331 (23%), Positives = 124/331 (37%), Gaps = 18/331 (5%) Query: 373 VQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVA 431 Q + E ++ + + +L+ + + YRL A+ + Sbjct: 59 SQIVCRMFEWDTLTEEVLTENYWAVKLKNAFALRQTVIQFGKTNVYRLLHAEGDFFPGII 118 Query: 432 VDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQY 491 D YAD VV+Q K + + I T Sbjct: 119 ADVYADVVVLQVL----IRGVEKIVPAIQKALVEI-GFKHIYIKAKTSSTVLEDIRTGSG 173 Query: 492 QKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGS 551 LG + V E + V+ D TG F+D R R +L SKGK LN F YTG Sbjct: 174 WLLGGVEVPVIVKENDVLFEVDFIDGQKTGFFVDQRENRELLRSYSKGKKVLNTFCYTGG 233 Query: 552 ATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE-ANEQFD 610 +V+A GGA +VD+S+ + A +N+ LN G H I ADC +L + + +D Sbjct: 234 FSVYAASGGAEVVDSVDISKEAVALAGKNMELN-YPGYKHGTIAADCFDFLGDIEKDYYD 292 Query: 611 LIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLD---- 666 +I +DPP F+ S + + R + + R ++ GG + + + DL Sbjct: 293 IIVLDPPAFAKSAKA--VANACRGYKQINLKAFRKIKKGGLLFTYSCSQNIDKDLFQKIV 350 Query: 667 --GLAKLGLKAQEITQKTLSQDFARNRQIHN 695 A + I Q D N I++ Sbjct: 351 FGAAADSYRNVRIIHQMHQPADHPIN--IYH 379 >UniRef50_B3QNQ6 PUA domain containing protein n=12 Tax=Chlorobiaceae RepID=B3QNQ6_CHLP8 Length = 394 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 75/371 (20%), Positives = 145/371 (39%), Gaps = 24/371 (6%) Query: 335 NQFGGWNLSLFSAS-PDLLSCLQLRADKQYKAKNGPL-DCVQKNYHV---AESTPDSKPA 389 + G +L +FS ++ + Q +G L N H + Sbjct: 12 RRLLGGHLWVFSNELKEVPRDIAAGETVQLFTNDGRLLGTGFFNPHSLIAFRLLTRDETQ 71 Query: 390 MVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQEYAPPK 448 E + N++R+ LK EK + +RL + + +DR+ V+Q ++ Sbjct: 72 PDREFFRNKIREALKLREKIYPESETNAWRLVHGESDGLPGLVIDRFDKAFVLQSFSA-- 129 Query: 449 TIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFL-EVTEYN 507 + +++ I + LG++ + + + Sbjct: 130 --GMENHLPIITEVLRELFDPKAIVLRNESPLRELEGLPLYKEMLLGDENDAWQVINDDG 187 Query: 508 AHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTV 567 VN+ + TG FLD R RR + + + D L++++ G ++A GARSTT V Sbjct: 188 ISYRVNILEGQKTGFFLDQRENRRHIRKYAADADVLDVYTNDGGFALNAMHAGARSTTMV 247 Query: 568 DMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA---WLREANEQFDLIFIDPPTFSNSKR 624 D+S+ L+ AE+N R+NGL ++ D A LR+ N +DL+ +DPP+F+ S++ Sbjct: 248 DISQDALQRAEQNARMNGLE--KFSIVADDAFATLGRLRQENRSYDLVILDPPSFTKSRK 305 Query: 625 MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLD------GLAKLGLKAQEI 678 + + L + +L++ G + ++ + G G + I Sbjct: 306 T--VPTALKAYTKLNRLGLQLVKNEGFLATASCSHHVSEEDFLAAVQLGALHAGKHLRLI 363 Query: 679 TQKTLSQDFAR 689 ++ D Sbjct: 364 SRNAQPPDHPI 374 >UniRef50_C7N186 SAM-dependent methyltransferase n=13 Tax=Bacteria RepID=C7N186_SLAHD Length = 416 Score = 266 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 65/328 (19%), Positives = 134/328 (40%), Gaps = 29/328 (8%) Query: 383 TPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVV 441 T ++ + ++R + + + + C R+ + + VDR+ D +V Sbjct: 79 TRNANDRFDQAFWERKVRWSWEYRKSVM-GADVSCCRVVFGEADGFPGLVVDRFNDVLVT 137 Query: 442 QEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKT----RERQKGKN--QYQKLG 495 Q T + + +F ++A +S G+A + + R+ + + LG Sbjct: 138 QTL----TFGMEQLKPVVFPVLAKVLSEDGVALRGIYERNDVATRKLETLDQSCGWFDLG 193 Query: 496 EK----GEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGS 551 E+ E V+ + TG FLD + RR + ++ GK L+ F++TGS Sbjct: 194 GVSAGGDTTTEICENGVRYQVDFENGQKTGFFLDQKYNRRAVAALASGKRVLDCFTHTGS 253 Query: 552 ATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL----REANE 607 ++A +GGA VD+S+ ++ A N RLNG R + L + + Sbjct: 254 FALNAAVGGAEFVNAVDVSQLAIDQARANARLNGCEDRMA-FTCTNVFDLLPQMEEDRDH 312 Query: 608 QFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD--- 664 +D I +DPP F+ S++ + R + + +LL GG + ++ + Sbjct: 313 SYDFIILDPPAFTKSRKTIGS--ASRGYKEINYRAMKLLPRGGYLATASCSHFMDTERFR 370 Query: 665 ---LDGLAKLGLKAQEITQKTLSQDFAR 689 ++ G++ +++ ++ + D Sbjct: 371 RMLVEAAHDAGVQLKQVEERQQAPDHPI 398 >UniRef50_B2V9T0 Methyltransferase small n=4 Tax=Bacteria RepID=B2V9T0_SULSY Length = 388 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 73/342 (21%), Positives = 129/342 (37%), Gaps = 20/342 (5%) Query: 360 DKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYR 419 K G ++ K + + ++ K K ++ + R Sbjct: 45 FKNTFCGVGYINPKSKI--TIRILSFEDVQVNEDFIKEKIEKAFDKRKELLK--ITNAIR 100 Query: 420 LYDADLPE-YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLV 478 L A+ + VD Y ++ +Q T + R+ + + I GI Sbjct: 101 LIHAEADGLPGLIVDYYDGYLSLQI----NTYGMERLRENILKSLIDIIKPKGIIEKSDE 156 Query: 479 LKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSK 538 + + GE E + + EY+ V+L + TG +LD R R++ + K Sbjct: 157 KAREKEGLQTEKKVLFGEVLEKILIFEYDVKFLVSLQESQKTGFYLDQRANRKLTSEYVK 216 Query: 539 -GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQAD 597 G L+LF G +H G GA VD+S L E N RLN L + + +++ D Sbjct: 217 EGFKVLDLFCNAGGFGIHGGKKGAEFIKFVDISSFALSQVEENARLNNL--KNYEIVKDD 274 Query: 598 CLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 657 +L++ +++DLI +DPP F+ SK + D R L+ + +LL G + + Sbjct: 275 VFDFLKKEKDKYDLIILDPPPFAKSKNEKH--DALRGFKYLILNSLKLLNQNGYLAIFSC 332 Query: 658 KRGFRMDL------DGLAKLGLKAQEITQKTLSQDFARNRQI 693 + ++ D L A+ T +D I Sbjct: 333 SQNITLEDLINTTYDSLKDTKNMAEFALFFTQDKDHPYILNI 374 >UniRef50_A7HKL6 PUA domain containing protein n=9 Tax=Thermotogaceae RepID=A7HKL6_FERNB Length = 394 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 65/315 (20%), Positives = 128/315 (40%), Gaps = 22/315 (6%) Query: 385 DSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQE 443 + E +R+ LK ++ + YR+ + + VD++ D++ VQ Sbjct: 69 RKPIEINKEFIKSRINDALKNRYNIVKE---DAYRVVFGEADGLPGLIVDKFGDYLSVQF 125 Query: 444 YAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEV 503 T+ +K + + D++ + GI ++ + G E + Sbjct: 126 ----NTLGINKLKNHIIDVLLENFNPKGIFERTEGSAVKKEGLEEKTEWIYGNGPELIPF 181 Query: 504 TEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARS 563 + T TG FLD R + L + ++GK+ L+ FSYTG+ +H GGA+ Sbjct: 182 EINGLKFLAD-TKGQKTGAFLDQRENAKKLMEFAEGKECLDCFSYTGNFGMHLLKGGAKH 240 Query: 564 TTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQ---FDLIFIDPPTFS 620 T VD S ++ A+ +LN + I A+ +L+E E +D++ +DPP+F+ Sbjct: 241 VTFVDYSERAIDVAKEIAKLNNFQN--CKFIVANAFDFLKEEFENSHLYDIVVLDPPSFA 298 Query: 621 NSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD--LDGLAKLGLKAQEI 678 S DA + + + ++L+ G + ++ + D + G+ A+ I Sbjct: 299 KSASSRDA--AFKGYKEINYRSMKILKNNGILATASCTQVVSQKEFEDIIVDAGIDAKVI 356 Query: 679 TQK----TLSQDFAR 689 + D + Sbjct: 357 LRMLYRGGQPIDHPQ 371 >UniRef50_B3PIV2 Putative lipoprotein n=12 Tax=Gammaproteobacteria RepID=B3PIV2_CELJU Length = 436 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 71/326 (21%), Positives = 120/326 (36%), Gaps = 18/326 (5%) Query: 377 YHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRY 435 D + +R+++ L E + YRL D + VDR+ Sbjct: 104 ICGRLVNRDPSHPLDKSLLVHRIKQALSLRELAFAEPY---YRLIYGDSDLLPGLVVDRF 160 Query: 436 ADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLG 495 D++VVQ + + + + + + I G+ + + G Sbjct: 161 GDYLVVQI----ASAGMEQVKDAIVEALVQVIKPAGVLLSNEHSARVLENLPEYTEVAYG 216 Query: 496 EKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVH 555 E E + + E + TG F DHR+ R L Q GK L++FSY G V Sbjct: 217 EMPEVVALVENGVRFMAPVQGGQKTGWFYDHRVNRAQLQQYVAGKRVLDVFSYIGGWGVQ 276 Query: 556 AGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLI--QADCLAWLREANEQFDLIF 613 A + GA+ VD S + N +NG+ + + D L L E+FD++ Sbjct: 277 AAVAGAQEVFCVDASTAATDAVLENASVNGVADKVAAIQGKAIDVLKQLIADQERFDVVV 336 Query: 614 IDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD--LDGLAKL 671 +DPP F ++ + A + + + + RLL G ++ ++ D LD + Sbjct: 337 LDPPAFIKKRKDQKAGEA--AYRHINELGMRLLGRDGLLVSASCSMHLAKDTLLDIVRAS 394 Query: 672 G----LKAQEITQKTLSQDFARNRQI 693 G Q I Q D + I Sbjct: 395 GRHLDRHVQIIGQGGQGPDHPIHPAI 420 >UniRef50_A3DM75 Putative RNA methylase n=1 Tax=Staphylothermus marinus F1 RepID=A3DM75_STAMF Length = 348 Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 89/392 (22%), Positives = 154/392 (39%), Gaps = 68/392 (17%) Query: 3 SLFASTARGLEELLKTELE-NLGA-VECQVVQGGVHFKGD---TRLVYQSLMWSRLASRI 57 L + G+E++ E+ LG + + G V+ D +Y+ R +R Sbjct: 2 ELLYTVNPGIEDIASEEIRAELGGVTSFENMSGHVYHVVDNVSFEAIYR----LRSINRA 57 Query: 58 MLPLGECKVYSD--------LDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGA 109 + L + ++ S +L+ ++ I++ P +FAV L S + Sbjct: 58 FILLFKSRIGSRTNDLIKLREELFSSLETIHY--YITPYTSFAVDTERLGSHEYTSMDIS 115 Query: 110 MKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSG-DGLHLRGYRDRA 168 V + I+ K +P V+ P I V+V++ E + + L+G LH RGYR Sbjct: 116 RIVGEIIIKKVEEKTGIKPVVNLRTPHIIVHVFVKDENFFLGVSLTGSRSLHRRGYRIYD 175 Query: 169 GIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGW 228 A +K TLA A++ SG + ++DPMCG GT+ IEAA+ Sbjct: 176 HPAALKPTLAYAMLTLSGTRDKQVIVDPMCGGGTIPIEAAL------------------- 216 Query: 229 AQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEV 288 + EA + YG D + R I+ A+ NA +G+ + F V Sbjct: 217 ----------LHEEA-------------YIYGYDRNPRHIRGAKLNAYASGVYGKVVFGV 253 Query: 289 KDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGR-IMKNQFGGWNLSLFSA 347 D +L + ++SNPPYG R A+ L+ K+ G L++ + Sbjct: 254 WDARRLHE-IFDEQVDHIVSNPPYGIRYGDPVAIRKLYRDFLDSTYKSLKPGGRLTIITT 312 Query: 348 SPDL----LSCLQLRADKQYKAKNGPLDCVQK 375 + + + R + ++G L Sbjct: 313 EYNYVLNKANYIGFRVVHKRTVQHGGLYPKIV 344 Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 41/112 (36%), Gaps = 5/112 (4%) Query: 542 FLNLFSYTGSATVHAGL-GGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA 600 ++ G+ + A L D + ++ A+ N +G+ G+ D Sbjct: 200 IVDPMCGGGTIPIEAALLHEEAYIYGYDRNPRHIRGAKLNAYASGVYGKVV-FGVWDARR 258 Query: 601 WLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTI 652 +EQ D I +PP R D +++ + + + L+ GG + Sbjct: 259 LHEIFDEQVDHIVSNPPY---GIRYGDPVAIRKLYRDFLDSTYKSLKPGGRL 307 >UniRef50_B2UN28 Putative SAM-dependent methyltransferase n=3 Tax=Verrucomicrobia RepID=B2UN28_AKKM8 Length = 394 Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 71/370 (19%), Positives = 138/370 (37%), Gaps = 28/370 (7%) Query: 339 GWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNR 398 G + +P + L+ K + + + VA K + + ++ R Sbjct: 21 GTEVRKIFGNPQPGDVVALKDFKDRFLGSAMFNPH--SQIVARRFSRRKQELNGDFFSRR 78 Query: 399 LRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQEYAPPKTIDAHKARQ 457 + + ++ + +E + RL ++ + VDRYAD++VVQ TI Sbjct: 79 ISQAVELRRRRLPEETLT--RLVWSESDGLPGLIVDRYADYLVVQTL----TIAMECRLP 132 Query: 458 RLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDY 517 + +++ +S GI + G++ E + ++L Sbjct: 133 IILNVLEDLLSPRGIIVRNDSPMLAAEGISPSVRVARGQQPEPFAARSGSVQFMIDLQTG 192 Query: 518 LDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWA 577 TGL+LD + + ++G+ L+ F G + L GA T VD+S+ ++ Sbjct: 193 QKTGLYLDQLDNYAAVARFARGRRVLDCFCNQGGFALACALAGASEVTAVDVSQDAMDAV 252 Query: 578 ERNLRLNGLTGRAHRLIQADCLAWLREA--------NEQFDLIFIDPPTFSNSKRMEDAF 629 RN RLNG++ + + + +L++ ++DLI +DPP+F+ +K+ Sbjct: 253 ARNARLNGVSVQC---VTDNAFDFLKKEAALVRDGGEHKWDLIILDPPSFTRNKKS--VH 307 Query: 630 DVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD------LDGLAKLGLKAQEITQKTL 683 D R + + +LL GG + D LD + + Q Sbjct: 308 DAMRGYKEIHLRAMKLLAPGGILSTFCCSHHAGADLFRESVLDAAIDAPATLRLMQQHGQ 367 Query: 684 SQDFARNRQI 693 D I Sbjct: 368 RADHPVLLNI 377 >UniRef50_D2QFB5 Methyltransferase n=14 Tax=Bacteria RepID=D2QFB5_9SPHI Length = 398 Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 124/337 (36%), Gaps = 20/337 (5%) Query: 364 KAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDA 423 +G + +++ P + +R K CYRL Sbjct: 55 HYHDGSIAVRIFSFNATAGGPVTPDLPYWTKKLAHIR----SIRKVIVTGETNCYRLVHG 110 Query: 424 DLPE-YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATI--SVLGIAPNKLVLK 480 + + +D Y +V+Q ++ I H+ R+ + D + + + Sbjct: 111 EGDGCTGLILDMYNGVIVLQAHS----IGMHREREIITDALKVVFGDELKAVYDKSAETL 166 Query: 481 TRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGK 540 E G V E ++ TG FLD R R +L Q ++GK Sbjct: 167 PDEYGATVTNGYLYGRTPVPHPVLENGNTFMIDWITGQKTGFFLDQRDNRALLAQYAEGK 226 Query: 541 DFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLN-GLTGRAHRLIQADCL 599 LN F Y+G +V+ GA +VD+S+ + E+N+ N G + H+ D + Sbjct: 227 KVLNAFCYSGGFSVYGLKAGATLVHSVDVSQKAITLTEQNITANFGESDDRHQAFAEDVM 286 Query: 600 AWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 659 +L+ ++Q+D++ +DPP F+ S+ + + L + + + GG + + + Sbjct: 287 HYLKNHDQQYDVVVLDPPAFAKSQSARH--RAVQGYKRLNAEGFKRVAKGGLLFTFSCSQ 344 Query: 660 GFRMDL------DGLAKLGLKAQEITQKTLSQDFARN 690 +L + G + + + + D + Sbjct: 345 VVDRELFYNTIVAAAIEAGRQVRVLHHLSQPADHPVS 381 >UniRef50_Q2VZ09 Predicted SAM-dependent methyltransferase n=6 Tax=Alphaproteobacteria RepID=Q2VZ09_MAGSA Length = 820 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 71/374 (18%), Positives = 129/374 (34%), Gaps = 36/374 (9%) Query: 328 LLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSK 387 +G K G L + L + N + + Sbjct: 457 EMGAEAKALPPGS---LVTLMDAGDERLGV------ATFNPH-----SLIAARVLSRRAA 502 Query: 388 PAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLP-EYNVAVDRYADWVVVQEYAP 446 + + RLR L + YRL ++ + VDRY D + VQ Sbjct: 503 DTVDVDFLAERLRAALALRDTLFPTPH---YRLVHSEADRLPGLIVDRYGDVLAVQTNTA 559 Query: 447 PKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEY 506 + L D + ++ + + + G+ +E+ E Sbjct: 560 ----GMERLLPVLLDALQMVLAPRAVVLVNDSPVRKLEGLEPHHDVAFGQVDGPVELEEN 615 Query: 507 NAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTT 566 +LT TG F D R R + +++KG+ L+L++Y G V A GA T Sbjct: 616 GCRFVADLTGGQKTGWFFDQRDNRAFVARLAKGRRVLDLYTYAGGFAVQAAKAGATQTIA 675 Query: 567 VDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE---ANEQFDLIFIDPPTFSNSK 623 VD S L A++ RLNG+ + ++A+ A + A E+F L+ DPP F S+ Sbjct: 676 VDRSEHSLALADQAARLNGVE---VQTVRAEAFAEMERLALAGERFGLVVADPPAFVKSR 732 Query: 624 RMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDG------LAKLGLKAQE 677 + D + + + + L+ GG ++ ++ ++ L G + Sbjct: 733 K--DLGAGAKGYRKMARLAAALVEPGGFLLCASCSHHMPVETFAEEIGHGLHLAGRSGRI 790 Query: 678 ITQKTLSQDFARNR 691 + + D + Sbjct: 791 LRSAGAASDHPVHP 804 >UniRef50_Q7MSX4 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MSX4_WOLSU Length = 391 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 81/368 (22%), Positives = 142/368 (38%), Gaps = 21/368 (5%) Query: 331 RIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAM 390 R + G L +S + + L + KQ G ++ + ++ + Sbjct: 15 RTLPAWIYGSQLESLPSSLEQGELVHLYSPKQEFLALGYINPK--SQIALRILSFTQKSF 72 Query: 391 VAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQEYAPPKT 449 E+ RL+K + K E + RL ++ E + VD YA+ + +Q Sbjct: 73 TPEELKKRLQKAILKRESLLLK--TNGARLIHSESDELPGLIVDSYANHLSLQINTA--- 127 Query: 450 IDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAH 509 + R + + + +S L I + + GE + + + E A Sbjct: 128 -GMERFRPLILESLKELLSPLSIIDKSDEKSRQLEGLESSNGVIFGEVPQEILLQEEGAR 186 Query: 510 LWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDM 569 +NL + TG +LD R R +L +M+KGK L+LF G +HA L GA+ +D Sbjct: 187 FGINLLEGQKTGYYLDQRQNRLLLAEMAKGKRVLDLFCNGGGFGIHALLKGAKEALFIDS 246 Query: 570 SRTYLEWAERNLRLNGLTGRAHRLIQADCLAW---LREANEQFDLIFIDPPTFSNSKRME 626 S E ++NL LN L + R+I A+ LRE E+FDLI +DPP+F+ +K + Sbjct: 247 SEMACEQVKKNLSLNQLENKG-RIISANVFDELKGLREREEKFDLIILDPPSFAKTKEQQ 305 Query: 627 DAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD------LDGLAKLGLKAQEITQ 680 L+ ++ I + ++ L+ + Q + Sbjct: 306 K--GAMNGWKYLIIGAIKVAAPKARIALYSCSYHMGLNELAQVALEASRDSYTRLQILQY 363 Query: 681 KTLSQDFA 688 D Sbjct: 364 HLQDIDHP 371 >UniRef50_B3DWI3 SAM-dependent methyltransferase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DWI3_METI4 Length = 399 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 69/315 (21%), Positives = 118/315 (37%), Gaps = 19/315 (6%) Query: 385 DSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQE 443 K + E L K K EK + YRL+ ++ + +D+YADW VVQ Sbjct: 75 REKVPLNKEIIHCFLSKAFKYREKLFSGKDSNAYRLFWSESDGLPGLIIDKYADWYVVQF 134 Query: 444 YAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEV 503 A + R + +++ I + + V Sbjct: 135 LTS----GADRKRNEILEVLKGITQSTNIILRNDAPVRLLEGLSLTKESLKEDFPCRHLV 190 Query: 504 TEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARS 563 + V+L + TGL+LD + + Q++KGK L+ FSY G ++ GGA+ Sbjct: 191 CMEGIPILVDLYNGQKTGLYLDQAANYKFISQIAKGKRVLDCFSYQGLFSIFCARGGAQC 250 Query: 564 TTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFS 620 VD S ++ + N GL + + WLR E+FDLI +DPP+F+ Sbjct: 251 CVAVDQSAAAIDIGKENASQLGL---QIEWVCENAFDWLRKKEREKEKFDLIILDPPSFT 307 Query: 621 NSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL------DGLAKLGLK 674 +K +++ R + + RLL +GG + M+ + + Sbjct: 308 KTKVQKES--AFRGYHEIHLRALRLLDSGGFLASFCCSHHITMEEWKELISRACWETSSR 365 Query: 675 AQEITQKTLSQDFAR 689 + + S D Sbjct: 366 LRYLGCLPQSPDHPI 380 >UniRef50_Q1AXR5 SAM-dependent methyltransferase n=5 Tax=Bacteria RepID=Q1AXR5_RUBXD Length = 391 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 77/341 (22%), Positives = 125/341 (36%), Gaps = 27/341 (7%) Query: 363 YKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYD 422 Y N + + E + + +RLR L+ + YRL Sbjct: 53 YAFYNPRSEIALRVAERREGV-----GIDGAWFGSRLRAALEYRAGLGIDG--DAYRLLH 105 Query: 423 ADLPE-YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKT 481 A+ + D Y + VV+Q + + + + +A +S G+ Sbjct: 106 AEADGVPGLVADVYGEHVVLQVGSAA----VERRLELVVRALAELLSPAGVLLRGDAGSR 161 Query: 482 RERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKD 541 R + G+ E + V E V L TG FLD R R G+ ++G Sbjct: 162 RREGLRRTVAVLHGKVPEAVVVREGPVRYRVPLWRGQKTGAFLDQRENRLAAGRHARG-R 220 Query: 542 FLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW 601 L++FSY G +HA A S VD S LE A N RLNGL ++A+ Sbjct: 221 VLDVFSYGGGFALHAARR-AASVEAVDSSAAALEQARENARLNGLGN--LSFVEANAFDL 277 Query: 602 LR---EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 658 LR +A E +D + +DPP F+ ++R D R + + +LL GG ++ + Sbjct: 278 LRARSDAGEAYDTVILDPPAFARTRR--DLPRAARAYKEINLRAMKLLAPGGVLVTCSCS 335 Query: 659 RGFRMD------LDGLAKLGLKAQEITQKTLSQDFARNRQI 693 + A G + + + + D I Sbjct: 336 YHLSREAMEGVLRSAAADAGRSLRVLEWRGQAADHPEVLNI 376 >UniRef50_C6LAG7 Hydrogenase-4, F subunit n=4 Tax=Clostridiales RepID=C6LAG7_9FIRM Length = 380 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 70/338 (20%), Positives = 137/338 (40%), Gaps = 18/338 (5%) Query: 363 YKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYD 422 Y G + + T ++ + + R++ +K RL Sbjct: 29 YPLGRGFI-NRHSKIRIRLMTRNAAQEIDRDFIRMRVQNAWNYRKKTV---DTGSCRLIF 84 Query: 423 ADLP-EYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKT 481 + + +D+++D +VV+ A + L +++A ++ + K Sbjct: 85 GEADFLPGIVIDKFSDVLVVESLALGIDRLKETIVEALKEVLAEDGVIIRGVYERSDAKV 144 Query: 482 RERQKGKNQYQKLGEK-GEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGK 540 RE++ + LGE + + E V++ + TG FLD + R+ + ++ G Sbjct: 145 REQEGMERCKGFLGEPFDTNVLIEENGVKYMVDVVNGQKTGFFLDQKYNRQSIRRLCPGA 204 Query: 541 DFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA 600 L+ F++TGS ++AG GA VD S+T +E AE N RLNGL R + + D Sbjct: 205 RVLDCFTHTGSFALNAGAAGAAEVLGVDASQTGVEQAELNARLNGLEDR-VKFVCRDVFE 263 Query: 601 W---LREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 657 L E E FDL+ +DPP F+ S+ + + + + +L++ GG + + Sbjct: 264 LLPELEEKGETFDLVILDPPAFTKSRSS--VKNAVKGYREINLRAMKLVKDGGFLATCSC 321 Query: 658 KRGFRMDL------DGLAKLGLKAQEITQKTLSQDFAR 689 +L + + +++ +T + D Sbjct: 322 SHFMTYELFTQTIRQAAQNVHKRLRQVEFRTQAPDHPI 359 Score = 44.9 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 46/144 (31%), Gaps = 3/144 (2%) Query: 258 FYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK--GPYGTVLSNPP-YGE 314 G D+ +++A NARL G+ + + F +DV +L L + + V+ +PP + + Sbjct: 228 VLGVDASQTGVEQAELNARLNGLEDRVKFVCRDVFELLPELEEKGETFDLVILDPPAFTK 287 Query: 315 RLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQ 374 S + + + + ++ + A+N Q Sbjct: 288 SRSSVKNAVKGYREINLRAMKLVKDGGFLATCSCSHFMTYELFTQTIRQAAQNVHKRLRQ 347 Query: 375 KNYHVAESTPDSKPAMVAEDYTNR 398 + A Y Sbjct: 348 VEFRTQAPDHPILWAADESYYLKF 371 >UniRef50_C1ZEX7 Predicted SAM-dependent methyltransferase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZEX7_PLALI Length = 552 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 63/339 (18%), Positives = 125/339 (36%), Gaps = 27/339 (7%) Query: 363 YKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKF-EKWARQEGIECYRLY 421 Y N + + ++L +K E ++ YRL Sbjct: 183 YGLYNP------RAEMTVRMLTRGDQIPDEAWWKSKLEAAVKFRTETLGLEQQGNVYRLV 236 Query: 422 DADLPE-YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLK 480 A+ + VDRY D + V+ + + ++ + + D++AA Sbjct: 237 HAEGDGLPGLMVDRYGDVLSVEAF----NLGMYQRAESILDLLAACTGAKHGILRPGAYA 292 Query: 481 TRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGK 540 + + + E ++V E V D TG F D R R + +++ G+ Sbjct: 293 AQLEGFDADPFG-SENAPESVQVVENGVKYEVQFEDGHKTGFFCDQRQNRARVAELAAGQ 351 Query: 541 DFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA 600 L+L Y+G + A + GA+S VD+ + A++N +LN + AD A Sbjct: 352 RVLDLCCYSGGFALSAAVSGAKSVHGVDLDEAAIAVAKKNAKLNKV---QIEWAHADIFA 408 Query: 601 WLR---EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 657 W+R + +Q+D++ +DPP ++ +D D ++ + + + L+ GG ++ + Sbjct: 409 WMREAQKQGQQWDIVVLDPPKLIRTR--DDYEDGRKKYFDMNRLAASLVSPGGMLITCSC 466 Query: 658 KRGFRMDLD------GLAKLGLKAQEITQKTLSQDFARN 690 + G A+ Q D + Sbjct: 467 SGLLSSADFTRVTGYAIDNAGRSARLCEQTGAGPDHPVH 505 >UniRef50_C7H850 Methyltransferase n=8 Tax=Bacteria RepID=C7H850_9FIRM Length = 409 Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 62/327 (18%), Positives = 122/327 (37%), Gaps = 28/327 (8%) Query: 383 TPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVV 441 + ++ A + R+ + + R+ + + + VDR+ + +V Sbjct: 73 SRNANDTFDAAFWKRRVEYAWAYRKTVLEPADLTACRVIFGEADQFPGLTVDRFNNILVT 132 Query: 442 QEYAPPKTIDAHKARQRLFDIIAATISVLG-----IAPNKLVLKTRERQKGKNQYQK--- 493 Q + + K + LF ++A + G I + +N+ Sbjct: 133 QTLS----VGMEKLKPILFPLLAEVLRADGQTIDGIYERNDEALRAKEGLAQNKGWFDLP 188 Query: 494 LGEKGEFL--EVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGS 551 + E+ E V+ + TG FLD + RR + +++ G L+ F++TGS Sbjct: 189 GETHPDSTKTEICENGVFYHVDFENGQKTGFFLDQKYNRRAVARIAAGHTVLDCFTHTGS 248 Query: 552 ATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW---LREANEQ 608 ++A GGA T D+S + A+RN + N LT + D L + Sbjct: 249 FALNAAKGGAARVTAADISAEAIAMAQRNAQRNNLTN--MDFLCEDTFELLPRLEKEGHP 306 Query: 609 FDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL--- 665 +D I +DPP F+ ++R + R + + +LL GG + ++ +L Sbjct: 307 YDFIILDPPAFTKARRT--VENAMRGYKEINYRAMKLLPRGGYLATASCSHFATEELFIK 364 Query: 666 ---DGLAKLGLKAQEITQKTLSQDFAR 689 + ++I K + D Sbjct: 365 MLHAAAKDAHRQLRQIEVKQQAPDHPI 391 >UniRef50_C9MRP3 Methyltransferase n=7 Tax=Prevotella RepID=C9MRP3_9BACT Length = 410 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 65/329 (19%), Positives = 123/329 (37%), Gaps = 27/329 (8%) Query: 385 DSKPAMVAEDYTNRLRKNLKKFEKWARQEGI---------ECYRLYDADLP-EYNVAVDR 434 + E + +RL L+ YRL + + +D Sbjct: 77 FHDIEIDDEFWESRLSAALQVRNAIGVIRQSGDVKEGYPNTTYRLVHGEGDNLPGLVIDV 136 Query: 435 YADWVVVQEYAPPKTIDAHKARQRLFDIIAATI--SVLGIAPNKLVLKTRERQKGKNQYQ 492 Y V+Q ++ + H R+ + + + + I + G+ Sbjct: 137 YGTTAVMQAHS----VGMHVCREVIARALVKVMGDQLDSIYYKSETTLPFKADLGQENGF 192 Query: 493 KLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSA 552 G+ + + E ++ TG F+D R R +L ++G+ LN+F YTG Sbjct: 193 IYGQTDNNIAI-ENGLKFHIDWLKGQKTGFFIDQRENRSLLEYYAQGRSVLNMFCYTGGF 251 Query: 553 TVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLI 612 +V+A GGA+ +VD S +E +N+ +N + H D +L + ++DLI Sbjct: 252 SVYAMRGGAKCVHSVDSSAKAIELTNKNIEINFPDDKRHAAFCEDAFKYLDDNEGKYDLI 311 Query: 613 FIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD------LD 666 +DPP F+ ++ + R + L +R+GG + + + D Sbjct: 312 ILDPPAFAKHRQALK--NGLRGYTRLNVKGFEKIRSGGILFTFSCSQVVTKDNFRQAVFT 369 Query: 667 GLAKLGLKAQEITQKTLSQDFARNRQIHN 695 A+ G K + + Q D N I++ Sbjct: 370 AAAQAGRKVRILHQLHQPADHPIN--IYH 396 >UniRef50_B7DS77 Methyltransferase small n=2 Tax=Alicyclobacillus acidocaldarius RepID=B7DS77_9BACL Length = 413 Score = 261 bits (668), Expect = 6e-68, Method: Composition-based stats. Identities = 67/342 (19%), Positives = 124/342 (36%), Gaps = 35/342 (10%) Query: 376 NYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDR 434 T + + + R ++ L+ ++A Q +Y + + VDR Sbjct: 60 QIFARVLTYRPDEHIDVDFFIRRFQQALEYRRRFAPQALAYGRAVY-GEADFVPGLVVDR 118 Query: 435 YADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKL 494 + + +V Q +A + + GI V Sbjct: 119 FGEVLVAQVLTAGMQRLWGQA----LEALVEVYKPAGILARNDVPVRALEGLPLVVETAY 174 Query: 495 GEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQM-----------------S 537 GE + ++V + V+L + TG F D R + + Sbjct: 175 GEVPDVVDVIDNGLTFSVDLREGQKTGYFWDQSENRAAIRPLMTGWTARRALFGEAPGDL 234 Query: 538 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQAD 597 G L+ F +TG+ VHA GA T VD+S +E A +N R NG+ RA A+ Sbjct: 235 DGAHVLDCFCHTGAFAVHALHYGAAHVTAVDISADAVELARQNARRNGVLDRA-DFAVAN 293 Query: 598 CLAWLRE---ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMF 654 +LRE ++D++ +DPP F+ S++ ++ R + + R+LR GG ++ Sbjct: 294 AFDYLREQDARGARYDVVILDPPAFAKSRQSIES--ATRGYKEINLRAMRILREGGFLVT 351 Query: 655 SNNKRGFRMD------LDGLAKLGLKAQEITQKTLSQDFARN 690 ++ + LD + + + + D +N Sbjct: 352 ASCSYHMSPERFRDTVLDAAVDAHKVLRIVRESRAASDHPQN 393 Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 75/306 (24%), Gaps = 70/306 (22%) Query: 120 FTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGY--RDRAGIAPIKETL 177 V+ ++ V + + ++DL +G GY A I+ Sbjct: 160 VRALEGLPLVVETAYGEVPDVVDVIDNGLTFSVDL-REG-QKTGYFWDQSENRAAIRP-- 215 Query: 178 AAAIVMRSGWQPGTPL-------------LDPMCGSGTLLIEAAMLATDRAPGLHRGRWG 224 + +GW L LD C +G + A Sbjct: 216 -----LMTGWTARRALFGEAPGDLDGAHVLDCFCHTGAFAVHALHYGA------------ 258 Query: 225 FSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELI 284 +H D A ++ AR NAR G+ + Sbjct: 259 -------------------------------AHVTAVDISADAVELARQNARRNGVLDRA 287 Query: 285 TFEVKDVAQL--TNPLPKGPYGTVLSNPP-YGERLDSEPALIALHSLLGRIMKNQFGGWN 341 F V + Y V+ +PP + + S + + + Sbjct: 288 DFAVANAFDYLREQDARGARYDVVILDPPAFAKSRQSIESATRGYKEINLRAMRILREGG 347 Query: 342 LSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRK 401 + ++ +S + R A + A S + Y L Sbjct: 348 FLVTASCSYHMSPERFRDTVLDAAVDAHKVLRIVRESRAASDHPQNAGAPEQHYLKFLIY 407 Query: 402 NLKKFE 407 ++ Sbjct: 408 EVRSRR 413 >UniRef50_C6CTT3 PUA domain containing protein n=2 Tax=Paenibacillus RepID=C6CTT3_PAESJ Length = 455 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 73/385 (18%), Positives = 126/385 (32%), Gaps = 81/385 (21%) Query: 376 NYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLP-EYNVAVDR 434 V + M A+ + + R ++ + RL + + VDR Sbjct: 61 QITVRVVSYQPLEEMDADFFREKFRLCEAHRSRFVQDRD---CRLVYGEADFLPGLVVDR 117 Query: 435 YADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKL 494 +AD +VVQ T+ R+ L + GI V + Sbjct: 118 FADVLVVQIL----TLGMDIRREALVAALVDVFQPKGIYERSDVGVRQLEGLELRTGVLY 173 Query: 495 GEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKG--------------- 539 GE LE+ E L V++ + TG F D R R + + KG Sbjct: 174 GECPRILEIEENGLKLEVDIVEGQKTGYFYDQRENRASIEPLMKGWGARSGIRLENRPAD 233 Query: 540 -------------------------KDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYL 574 L F++TGS T+HA GA+ T +D+S + Sbjct: 234 TDTEVTRLVPVNPNGKEVTFPYWDGATVLECFAHTGSFTLHACKYGAKKVTCLDVSEHAI 293 Query: 575 EWAERNLRLNGLTGRAHRLIQADCLAWLREA------------------------NEQFD 610 + A RN+ NG R + AD +LR +D Sbjct: 294 DTARRNVERNGFADR-VEFVVADAFDYLRTQVKGVEERAERSRAGADTSKPLSGGGRTWD 352 Query: 611 LIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL----- 665 ++ +DPP F+ +K R + + +L+ GG ++ ++ R DL Sbjct: 353 VVILDPPAFAKTKSA--VAGACRGYKDINLHGLKLVNEGGYLVTASCSYHMRPDLFLETI 410 Query: 666 -DGLAKLGLKAQEITQKTLSQDFAR 689 + + G + + + +D + Sbjct: 411 QEAASDAGKLLRLVEWRAAGKDHPQ 435 >UniRef50_B1ICH9 Methyltransferase n=65 Tax=Streptococcaceae RepID=B1ICH9_STRPI Length = 387 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 83/318 (26%), Positives = 144/318 (45%), Gaps = 18/318 (5%) Query: 385 DSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYN-VAVDRYADWVVVQE 443 K A + RK +K + + + +RL++ + + + VD Y D+ V Sbjct: 64 KDKVAFNQTFFETLFRKAKEKRNAYYQDDLTTAFRLFNQEGDGFGGLTVDLYGDYAVFSW 123 Query: 444 YAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEV 503 Y ++ RQ + + + A K+ K + + Q E +F V Sbjct: 124 YNSY----VYQIRQTISEAFRQVFPEVLGAYEKIRFKGFDYESAHVYGQ---EAPDFFTV 176 Query: 504 TEYNAHLWVNLTDYLDTGLFLDHRIAR-RMLGQMSKGKDFLNLFSYTGSATVHAGLGGAR 562 E V + D L TG+FLD R ++ ++ GK LN+FSYT + +V A +GGA Sbjct: 177 LENGVLYQVFMNDGLMTGIFLDQHEVRGSLVDGLAMGKSLLNMFSYTAAFSVAAAMGGAS 236 Query: 563 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQ---FDLIFIDPPTF 619 TT+VD+++ E ++ + + NGL+ HR I D + + A + +D+I +DPP+F Sbjct: 237 QTTSVDLAKRSRELSQAHFQANGLSTDEHRFIVMDVFEYFKYAKRKDLTYDVIVLDPPSF 296 Query: 620 SNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL--DGLAK--LGLKA 675 + +K+ F V +D+ L+ +L GG I+ S N + + K G Sbjct: 297 ARNKK--QTFSVAKDYHKLISQSLEILNPGGIIIASTNAANVSRQKFTEQIDKGFAGRSY 354 Query: 676 QEITQKTLSQDFARNRQI 693 Q + + L DFA N++ Sbjct: 355 QILNKYGLPADFAYNKKD 372 >UniRef50_A4IKQ9 Predicted SAM-dependent methyltransferase n=8 Tax=Firmicutes RepID=A4IKQ9_GEOTN Length = 399 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 75/337 (22%), Positives = 132/337 (39%), Gaps = 22/337 (6%) Query: 363 YKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYD 422 Y G ++ V T + + E + R+R+ E+ GI R Sbjct: 52 YWLAKGYINPA-SQIIVRILTQNPDDELNEEFFIERIRQAWAYRERMI--PGIRSCRAIY 108 Query: 423 ADLP-EYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKT 481 + + VD+Y D + VQ A + K + + + + I V Sbjct: 109 GEADFLPGLIVDKYEDVLSVQILA----LGMEKRKDWILRGLLDVFAPRAIYLRNDVYVR 164 Query: 482 RERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMS-KGK 540 + + GE +E+ E V++ TG F D R R L + Sbjct: 165 ELEGLKQEKGFWYGEAETEIEIEENGVKYIVDIEGGQKTGFFFDQRQNRAALRPLIGPET 224 Query: 541 DFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA 600 L+ F++TGS ++A L GA+ T VD+S +E A+RN LNG T + A+ Sbjct: 225 TVLDCFTHTGSFMLNACLYGAKHVTAVDISEHAIETAKRNAALNGFTN--VDFVVANAFD 282 Query: 601 WLR---EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 657 +LR A +Q+D++ IDPP F+ S R + + + +L++ GG + S+ Sbjct: 283 YLRESVRAGKQWDVVIIDPPAFAKS--AHAVPKALRGYKDINLNGLKLVKDGGFFVTSSC 340 Query: 658 KRGFRMDL--DGLAKLGLKAQEITQK----TLSQDFA 688 R + + +A A+++ ++ D Sbjct: 341 SYHVRPHMFQEMVADAAFDAKKVLRQVYWSGAGYDHP 377 >UniRef50_Q3JX99 Predicted SAM-dependent methyltransferases n=55 Tax=Proteobacteria RepID=Q3JX99_BURP1 Length = 425 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 71/369 (19%), Positives = 125/369 (33%), Gaps = 56/369 (15%) Query: 363 YKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYD 422 A + + + + D + + R+++ L G + RL Sbjct: 51 RAAYSPHSQIRLRVW-----SFDENEPIDHAFFKRRVQRALAHRRAMI--SGTDAVRLVF 103 Query: 423 ADLPE-YNVAVDRY---------------------------AD-----WVVVQEYAPPKT 449 + + VD Y D +V Q A Sbjct: 104 GEADGLPGLIVDYYVAARGAAHTGDAAARAAEGGAAAPVAPGDGEGRGQLVCQFMAA--- 160 Query: 450 IDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGE-KGEFLEVTEYNA 508 + + + A + V + + G+ + L E Sbjct: 161 -GVEHWKGAIVAALVAATGCPNVYERSDVSIREKEGLEQTTGVLAGDAPPDTLIANENGV 219 Query: 509 HLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVD 568 V++ + TG ++D R R ++ Q ++ +D LN F YTG ++ A GGA+ ++D Sbjct: 220 LYHVDVRNGHKTGFYVDQRENRALVAQYARDRDVLNCFCYTGGFSLAALKGGAKRVVSID 279 Query: 569 MSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE---ANEQFDLIFIDPPTFSNSKRM 625 S L A+RN+ NG + + AD LR E+FDLI +DPP F+ ++ Sbjct: 280 SSGDALALAQRNVAANGFDAARAQWLDADAFKTLRRLVDEGERFDLIVLDPPKFAPTRDS 339 Query: 626 EDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLD------GLAKLGLKAQEIT 679 D R + + +LLR GG + + MDL A + A+ + Sbjct: 340 VD--RAARAYKDINLSGLKLLRPGGLLFTYSCSGAIDMDLFQKIVAGAAADAKVDARILK 397 Query: 680 QKTLSQDFA 688 + D Sbjct: 398 RLGAGVDHP 406 >UniRef50_Q2IKG3 SAM-dependent methyltransferase n=6 Tax=Cystobacterineae RepID=Q2IKG3_ANADE Length = 400 Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats. Identities = 77/328 (23%), Positives = 129/328 (39%), Gaps = 15/328 (4%) Query: 374 QKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLP-EYNVAV 432 V T + A+ A + R+ + + + R YR+ + V Sbjct: 59 HSAISVRILTREPAEAIDAAFWRRRVARAVALRRELVRD--TTGYRVVHGEGDALPGVVA 116 Query: 433 DRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQ 492 DRY VV++ Y+ T + + L V G + G + Sbjct: 117 DRYDRHVVLKLYSAGLTPHRAEIVEALHAEQEGVAGVFGRDEIPRDDQDEGEGGGSGRVL 176 Query: 493 KLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGK-DFLNLFSYTGS 551 E E + + E+ + V++ TG FLD R RRM+ +++G+ + LNLF YTG Sbjct: 177 WGAEPPERIAIDEHGMKVLVDVRRGQKTGHFLDQRENRRMVRDLARGRAEALNLFGYTGG 236 Query: 552 ATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL---REANEQ 608 +V A LGGA TVD+ R + A N R NGL H DC L + + Sbjct: 237 FSVAAALGGAGHVVTVDVDRDAIALARENFRANGLDAADHAFAAEDCFELLARYKREGRR 296 Query: 609 FDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL--D 666 FDL+ DPP F+ S++ + +L + +L GG ++ ++ + D Sbjct: 297 FDLVVCDPPAFAKSQKA--VEGALAGYASLNRAALAVLAPGGLLVTASCSARVSAEQFAD 354 Query: 667 GLAKLGLKAQE----ITQKTLSQDFARN 690 + + KA+ + + D + Sbjct: 355 AVKEAAYKARVDLALVAETRQPPDHPVS 382 >UniRef50_B5YL48 Methyltransferase small domain family n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YL48_THEYD Length = 386 Score = 257 bits (658), Expect = 8e-67, Method: Composition-based stats. Identities = 72/349 (20%), Positives = 136/349 (38%), Gaps = 24/349 (6%) Query: 351 LLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWA 410 L+ + + +K G ++ + + R++K+ K E + Sbjct: 34 LVKVFEEKTNKI--IGTGYINPQ--SVIAVRLLSFGDEQINKNFLRERIQKSHKYREDFL 89 Query: 411 RQEGIECYRLYDADLP-EYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISV 469 + E YRL ++ + VD+Y +V+Q + + + +I+ + Sbjct: 90 GLK--ESYRLIFSESDFLPGLIVDKYGKCLVIQILTA----GMERLKDLIVEILDKLLVP 143 Query: 470 LGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIA 529 I + + G + E + + + TG FLD R Sbjct: 144 EVIILRNDAQPRVKEGLKVEKMVIKGCVDNLIMTKEDDLKFYFDPLHGQKTGFFLDQREN 203 Query: 530 RRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGR 589 R L + + L+LF Y G+ ++H GA T +D S +E A++N LN + + Sbjct: 204 RLYLKSLISSGEGLDLFCYVGAWSIHLAKRGAN-ITGIDSSEKAIEIAKQNAMLNNVQDK 262 Query: 590 AHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLL 646 R I+AD +LR + +++D I +DPP F S++ + D ++ L + +LL Sbjct: 263 C-RFIKADVFDYLRWEAKKGKKYDFIVVDPPAFVKSRQEKK--DAIEGYVNLNRMALKLL 319 Query: 647 RAGGTIMFSNNKRGFRM-DLDGLAKLGLKAQEIT-----QKTLSQDFAR 689 R G + S+ + D + K KA + T + T S+D Sbjct: 320 RKNGILATSSCSQHISETDFLEIIKKTFKASKKTGILLYKGTQSKDHPI 368 Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Query: 251 LAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK--GPYGTVLS 308 LA+ ++ G DS + I+ A+ NA L + + F DV K Y ++ Sbjct: 230 LAKRGANITGIDSSEKAIEIAKQNAMLNNVQDKCRFIKADVFDYLRWEAKKGKKYDFIVV 289 Query: 309 NPP 311 +PP Sbjct: 290 DPP 292 >UniRef50_C4FU68 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FU68_9FIRM Length = 396 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 80/326 (24%), Positives = 137/326 (42%), Gaps = 17/326 (5%) Query: 375 KNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYN-VAVD 433 + + R++ L + + + + +RL + + V VD Sbjct: 61 RQQKGLGWLLTRDSQLDDNWVEKRVQAALSQRHSYFNRSDLTAFRLVNGEGDGLGGVTVD 120 Query: 434 RYADWVVVQEYAPPKTIDAHKARQRLFDIIAA-TISVLGIAPNKLVLKTRERQKGKNQYQ 492 YA ++ + Y+ + R L + A +LGI + + Q + Sbjct: 121 WYAGFIQLNWYSQ----GIYHYRDELVSALKAHVSDILGIYETQRFDQQVAEQAINHLEG 176 Query: 493 KLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSA 552 +L + + E H ++L TGLFLD R R + Q + GK LNLFSYTG Sbjct: 177 QL--APAPVIIRENGIHYAIHLGQEWMTGLFLDQRQVRDYVMQGAAGKKILNLFSYTGGF 234 Query: 553 TVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTG--RAHRLIQADCLAWLREANEQ-- 608 +V A +GGA T +VD++ L + N LNG+ +AH + D ++R A + Sbjct: 235 SVAAAMGGASQTVSVDVANRSLAKTQENFALNGIEAPSQAHEIRVMDVFDYIRYAKRKGL 294 Query: 609 -FDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL-- 665 FD + DPP+F+ +K+ F +D+ L DL L+ GG ++ S N + ++ Sbjct: 295 TFDQVVCDPPSFARTKKY--TFSALKDYGRLAADLWCLVAPGGQLVLSTNHSAYSLEDFK 352 Query: 666 DGLAKLGLKAQEITQKTLSQDFARNR 691 A+ + L +DF R+ Sbjct: 353 ADCLAACPDAELLAHFGLGEDFPRSE 378 >UniRef50_Q5SIT4 Putative uncharacterized protein TTHA1280 n=2 Tax=Thermus thermophilus RepID=Q5SIT4_THET8 Length = 382 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 82/351 (23%), Positives = 127/351 (36%), Gaps = 31/351 (8%) Query: 358 RADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIEC 417 R N D + Y A + + L + L + E RQ+ Sbjct: 41 RRFLALALYNPHTDLAVRAYRFAPAEDPVAALLEN------LAQALARREAVLRQDPEGG 94 Query: 418 YRLYDADLPE-YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNK 476 YRL A+ + VD YA VVQ A + + L V + Sbjct: 95 YRLVHAEGDLLPGLVVDYYAGHAVVQATAHAWEGLLPQVAEALR------PHVQSVLAKN 148 Query: 477 LVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQM 536 LGE E ++V E V+L TG +LD R R + + Sbjct: 149 DARTRELEGLPLYVRPLLGEVPERVQVQEGRVRYLVDLRAGQKTGAYLDQRENRLYMERF 208 Query: 537 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQA 596 +G+ L++FSY G +H L G R VD S L AE N RLNGL R+++A Sbjct: 209 -RGERALDVFSYAGGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGN--VRVLEA 264 Query: 597 DCLAWLRE---ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIM 653 + LR E+FDL+ +DPP F+ K+ D R + + +LL+ GG + Sbjct: 265 NAFDLLRRLEKEGERFDLVVLDPPAFAKGKK--DVERAYRAYKEVNLRAIKLLKEGGILA 322 Query: 654 FSNNKRGFRMDL------DGLAKLGLKAQEITQKTLSQDFAR---NRQIHN 695 ++ L + + + ++ D + + H Sbjct: 323 TASCSHHMTEPLFYAMVAEAAQDAHRLLRVVEKRGQPFDHPVLLNHPETHY 373 >UniRef50_P39587 Putative ribosomal RNA large subunit methyltransferase ywbD n=112 Tax=Bacteria RepID=YWBD_BACSU Length = 396 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 76/319 (23%), Positives = 136/319 (42%), Gaps = 21/319 (6%) Query: 383 TPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYN-VAVDRYADWVVV 441 T + + + ++L K + K + +RL++ + V +D Y ++++ Sbjct: 67 TRNKHEQIDQAFFLSKLTKAAQARAKLFEAQDTTAFRLFNGEGDGVGGVTIDYYDGYLLI 126 Query: 442 QEYAPPKTIDAHKARQRLFDIIAAT-ISVLGIAPNKLVLKTRERQKGKN-QYQKLGEKGE 499 Q Y+ + + L + + I K + + + + GE Sbjct: 127 QWYS----KGIYTFKDMLISALDEMDLDYKAIYEKKRFDTAGQYVEDDDFVKGRRGEFP- 181 Query: 500 FLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLG-QMSKGKDFLNLFSYTGSATVHAGL 558 + + E V+L + TG+FLD R R+ + + +KGK LN FSYTG+ +V A L Sbjct: 182 -IIIQENGIQYAVDLNEGAMTGIFLDQRHVRKAIRDRYAKGKTVLNTFSYTGAFSVAAAL 240 Query: 559 GGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWL---REANEQFDLIFID 615 GGA TT+VD++ L +N L AH + D + + + +FDLI +D Sbjct: 241 GGAEKTTSVDVANRSLAKTIEQFSVNKLDYEAHDIKVMDVFNYFSYAAKKDLRFDLIILD 300 Query: 616 PPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD------LDGLA 669 PP+F+ +K+ F +D+ L+K+ + G I+ S N F M Sbjct: 301 PPSFARTKKR--TFSAAKDYKNLLKETIAITADKGVIVASTNSSAFGMKKFKGFIDAAFK 358 Query: 670 KLGLKAQEITQKTLSQDFA 688 + + I + TL +DF Sbjct: 359 ETNERYTIIEEFTLPEDFK 377 >UniRef50_A6CDL6 Putative uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CDL6_9PLAN Length = 416 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 65/339 (19%), Positives = 121/339 (35%), Gaps = 28/339 (8%) Query: 367 NGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEG--IECYRLYDAD 424 N + ++ D + +TNRL + + E+ E RL ++ Sbjct: 76 NSNIRVRLFSW-------DESEVLDNSFWTNRLEQAVTLREQVGLLENFETSGCRLVFSE 128 Query: 425 LP-EYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRE 483 + +DRY W +VQ + + + + + + A GI Sbjct: 129 SDQLSGLTIDRYGAWFLVQFSSLALS----QKQDLIIQFLKARFPAKGIWLRTEKGMREA 184 Query: 484 RQKG-KNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDF 542 +Q E + E +++ TG +LD R R + K Sbjct: 185 EGLEISDQLLDGEEPPAHFFLEENGIRYGMSMVTGQKTGFYLDQRENRLAAARYLKNHRT 244 Query: 543 LNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW 601 L L YTG+ ++A + G A+S + D S++ ++ A N LNG+ R H A Sbjct: 245 LELHCYTGAFALNAIIHGQAQSVVSYDSSQSAIDQATANAELNGIGNRIH-FQTGKAYAV 303 Query: 602 LRE---ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 658 L + EQFD I +DPP + + + + +L + +L+ GG ++ + Sbjct: 304 LEQFKAEGEQFDSIILDPPKMARHRS--GVKQALKGYFSLNRLAFDVLKPGGILITCSCS 361 Query: 659 RGFRM-DLDGLAK-----LGLKAQEITQKTLSQDFARNR 691 + + G Q + Q++ D + Sbjct: 362 GLISQVEFQQMLASVSQHTGRHMQILEQRSQPADHPVSP 400 >UniRef50_C2HC77 S-adenosyl-L-methionine-dependent methyltransferase n=37 Tax=Bacilli RepID=C2HC77_ENTFC Length = 392 Score = 254 bits (650), Expect = 8e-66, Method: Composition-based stats. Identities = 72/317 (22%), Positives = 136/317 (42%), Gaps = 19/317 (5%) Query: 385 DSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYN-VAVDRYADWVVVQE 443 + K+ +K + + +R+++ + + +D YA + V Sbjct: 64 QQDIPFDHSFFEELFVKSKEKRTFFFSDDSTTAFRIFNGEGDGIGGLIIDYYAGYAVFSW 123 Query: 444 YAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEV 503 Y + R+ L + K+ ++ ++Q+ E E L V Sbjct: 124 YNET----LYTHRELLIQAFREIYPEIIGGYEKIRFESVN--LPESQFIYGKEAPEPLIV 177 Query: 504 TEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQ-MSKGKDFLNLFSYTGSATVHAGLGGAR 562 E V L + L TG+FLD + R L + + GK LN+FSYTG+ +V A +GGA Sbjct: 178 KENGIKFAVYLNEGLMTGIFLDQKEVRGSLAEGFASGKTVLNMFSYTGAFSVAAAMGGAI 237 Query: 563 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQ---FDLIFIDPPTF 619 TT+VD+++ L+ + +NGL ++I D + + A + +D+I +DPP+F Sbjct: 238 ETTSVDLAKRSLKKTQEQFEVNGLDVDQQKIIVMDVFQYFKYAKRKQFLYDMIVLDPPSF 297 Query: 620 SNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD------LDGLAKLGL 673 + +K+ F V +D+ L+KD +L G ++ S N ++ + + Sbjct: 298 ARNKK--KVFRVAKDYGELVKDSLDILAENGILIASTNAANVSIEQFQTMIEEEFHAKNV 355 Query: 674 KAQEITQKTLSQDFARN 690 +++ L +DF Sbjct: 356 SFEQLALYRLPKDFQTT 372 >UniRef50_A8AXZ7 Methyltransferase n=5 Tax=Streptococcus RepID=A8AXZ7_STRGC Length = 387 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 82/319 (25%), Positives = 146/319 (45%), Gaps = 20/319 (6%) Query: 385 DSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEY-NVAVDRYADWVVVQE 443 K + + + K +K + + E I YRL++ + + + VD+Y D+ + Sbjct: 64 KQKVDFDRDFFISLFEKAKEKRRFYCQAEDITAYRLFNQEGDGFAGLTVDQYGDYALFSW 123 Query: 444 YAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEV 503 Y P ++ + L A K+ K + + + E E V Sbjct: 124 YNPFVF----SLKEEILQAFQEVFPELMGAYEKIRFKGLDYESA---HVYGAEAPEVFTV 176 Query: 504 TEYNAHLWVNLTDYLDTGLFLDHRIAR-RMLGQMSKGKDFLNLFSYTGSATVHAGLGGAR 562 E V L D L TG+FLD R ++ +++GK LN+FSYT + +V A +GGA Sbjct: 177 LENGVSYQVFLNDGLMTGIFLDQHEVRASLIDGLARGKSLLNMFSYTAAFSVAAAMGGAS 236 Query: 563 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQ---FDLIFIDPPTF 619 TT+VD+++ E +E + + NGLT HR + D + + A +D+I +DPP+F Sbjct: 237 QTTSVDLAKRSRELSEAHFQANGLTLDNHRFVVMDVFDYFKYAKRHGLSYDVIVLDPPSF 296 Query: 620 SNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR-----GFRMDLDGLAKLGLK 674 + +K+ F V +D+ L+K+ +L G ++ S N F+ +++ G Sbjct: 297 ARNKK--QTFSVAKDYHKLIKESLEILNPKGVLIASTNASNVTRAKFKKEIEK-GFAGKY 353 Query: 675 AQEITQKTLSQDFARNRQI 693 + I + L DF+ N++ Sbjct: 354 HRYIKEYGLPADFSYNKKD 372 >UniRef50_A3ZNP5 Putative uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZNP5_9PLAN Length = 389 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 67/329 (20%), Positives = 125/329 (37%), Gaps = 20/329 (6%) Query: 372 CVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNV 430 + HV + D + + + + ++ ++ + + RL ++ + Sbjct: 50 NRKSRIHVRLYSWDVEQPLTDDFWKQKIATSIDARRQLGLFDENAGCRLIYSEADGLSGL 109 Query: 431 AVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQ 490 VD +A +V+Q A + + + + +S I + Sbjct: 110 IVDYFAGHIVLQVNA----LAMERRLDVIVAALNEQVSPKSITLRGEAGVIKAEGVTIEP 165 Query: 491 YQKLGEKG-EFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYT 549 GE E + + E ++L+ TG +LD R R + G+ L++F YT Sbjct: 166 RVLQGEVPTEPIFIQENGIEFELDLSTGQKTGFYLDQRENRVAAAKYFSGRRVLDMFCYT 225 Query: 550 GSA-TVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR---EA 605 G A LGGA +D S ++ A RN NGL+ R D L+ +A Sbjct: 226 GGFALAAAKLGGASEVIGIDGSDKAIDLARRNAERNGLSN--VRFESVDAFDHLKALVDA 283 Query: 606 NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD- 664 E+FD + +DPP F+ ++R + + + + + + LL GG ++ + D Sbjct: 284 GEKFDAVILDPPKFTKTRR--NINEALKAYYHINRQAVNLLNPGGILVTCSCSGNISRDD 341 Query: 665 -----LDGLAKLGLKAQEITQKTLSQDFA 688 L K G Q + Q++ S D Sbjct: 342 FQMTLLGVAQKSGRDIQLLEQRSASIDHP 370 Score = 42.6 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 5/74 (6%) Query: 258 FYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK--GPYGTVLSNPP-YGE 314 G D + I AR NA G+ + FE D L + V+ +PP + + Sbjct: 241 VIGIDGSDKAIDLARRNAERNGLSN-VRFESVDAFDHLKALVDAGEKFDAVILDPPKFTK 299 Query: 315 -RLDSEPALIALHS 327 R + AL A + Sbjct: 300 TRRNINEALKAYYH 313 >UniRef50_C5A4F2 SAM-dependent methyltransferase, putative n=5 Tax=Thermococcus RepID=C5A4F2_THEGJ Length = 455 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 88/493 (17%), Positives = 166/493 (33%), Gaps = 95/493 (19%) Query: 215 APGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRAR-- 272 PG R F + W+ + + G S V++ AR Sbjct: 16 PPGYIR----FPELNTYRWRKWKIL-----EEHQLGQPFKEGRVLAS-----VVKMARVI 61 Query: 273 ---TNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLL 329 AR G G +I F+ V + G ++ +++ Sbjct: 62 VDAQAARAIGKGAMIVFKKGVVRT----EGEFEPGDIV----------------EVYTRG 101 Query: 330 GRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPA 389 G+ + F N + D + Sbjct: 102 GKFLGRGFVN--------------------------PNSNIMVRLL-------IKDRETP 128 Query: 390 MVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLP-EYNVAVDRYADWVVVQEYAPPK 448 + E + R++K + +K + + YR+ + + VDR+ + VQ Sbjct: 129 ITKELFRERIKKANEYRKKVLGYD--KAYRMVYGEADYLPGLIVDRFNEIASVQI----S 182 Query: 449 TIDAHKARQRLFDII-AATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYN 507 ++ + + + + I A + + R + + LG++ + E Sbjct: 183 SVGMERFKLDVAEAIMEAEPEIETVFEKNTGRSRRREGLPEIERVLLGKEKYRTIIEEGK 242 Query: 508 AHLWVNLTDYLDTGLFLDHRIARRMLGQMSK-GKDFLNLFSYTGSATVHAGLGGARSTTT 566 A V++ TG FLD R R L + K G L++F+YTG +HA + GA Sbjct: 243 AKFIVDMR-GQKTGFFLDQRENRIALEKYVKPGMRVLDVFTYTGGFAIHAAVAGADEVVA 301 Query: 567 VDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSK 623 VD S + + N +LNG+ R R I + + E+FD++ +DPP F + Sbjct: 302 VDKSPWAINMVKENAKLNGVEDRM-RYITGSAFPVMEEMIKKGEKFDIVILDPPAFVQHE 360 Query: 624 RMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD------LDGLAKLGLKAQE 677 + D R + + +L++ GG ++ + + M + AK G + Sbjct: 361 K--DLKRGLRAYFNVNHAGLKLVKEGGILVTCSCSQHVDMQAFKDMVIAAAAKAGKFLKM 418 Query: 678 ITQ-KTLSQDFAR 689 + +T + D Sbjct: 419 LEPYRTQAPDHPI 431 >UniRef50_C8NHK6 SAM (And some other nucleotide) binding motif, PUA domain protein n=2 Tax=Granulicatella RepID=C8NHK6_9LACT Length = 397 Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats. Identities = 72/318 (22%), Positives = 137/318 (43%), Gaps = 20/318 (6%) Query: 383 TPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYN-VAVDRYADWVVV 441 + + A+ ++ + + +RL++ + + V +D Y ++VV Sbjct: 66 SREEDEALDDAFFSGIFKTAFWNRRALLHSDDTTAFRLFNGEGDGFGGVTIDWYDGFIVV 125 Query: 442 QEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFL 501 Y+ + R + + K+ K E ++++ E E L Sbjct: 126 SWYSE----GVYHYRDLILTQALGAFEGVKGVYEKIRFKN-EADLPESRFVGGTEAPEPL 180 Query: 502 EVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLG-QMSKGKDFLNLFSYTGSATVHAGLGG 560 V E + + L TG+FLD R R + + S G+ LN FSYTG+ +V A +GG Sbjct: 181 IVLENGVKYATYMNEGLMTGIFLDQREVRETIRQRYSAGRTVLNTFSYTGAFSVAAAMGG 240 Query: 561 ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQ---FDLIFIDPP 617 A TT VD++ LE + +NG+ ++ D + + A ++ FD + +DPP Sbjct: 241 ATKTTCVDVANRSLEKTKEQFAVNGIDPETQQIYVMDVFDYFKYALKKQLTFDTVVVDPP 300 Query: 618 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN------KRGFRMDLDGLAKL 671 +F+ +K+ F V +D+ L+ + L+ GT++ S N + +M G+ + Sbjct: 301 SFARTKKR--TFSVVKDYGTLVAQITPLVAPKGTLVLSTNAANVTESQFQQMIEQGIREA 358 Query: 672 G--LKAQEITQKTLSQDF 687 + + + +K L DF Sbjct: 359 DGNRRYRIVLKKGLPSDF 376 >UniRef50_B1ZV13 Putative SAM-dependent methyltransferase n=2 Tax=Opitutaceae RepID=B1ZV13_OPITP Length = 408 Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats. Identities = 58/339 (17%), Positives = 103/339 (30%), Gaps = 30/339 (8%) Query: 365 AKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEG----IECYRL 420 N V + + + A + + + + ++ C RL Sbjct: 66 IYNSKSQIVWRRLS------RERIELDAAYLRAAIERAIARRASVGKRPDVRAETPCRRL 119 Query: 421 YDADLP-EYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVL 479 ++ V VD++ +V+Q +T+ + + D + A +S I Sbjct: 120 VWSESDDLPGVVVDQFGGTLVLQV----QTLAMEQRSTLISDSLDALLSPDEIIFRNDAP 175 Query: 480 KTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKG 539 R + G E V W++L TG +LD R + G Sbjct: 176 IRRLEGLPLEVRTRSGRPWEPRWVKVDGLDYWLDLQGGQKTGFYLDQRAQHGRVAAYCAG 235 Query: 540 KDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCL 599 K L+ F G+ +HA GA +D + + A RN N L A+ Sbjct: 236 KRVLDAFCNQGAFALHAARAGASKVLGLDSAEDAVAAARRNATQNRLNA---EFGVANVF 292 Query: 600 AWLREANEQ----FDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFS 655 W +D+I +DPP F+ SK + R + + + L GG + Sbjct: 293 DWFNAPGRAAEPLWDVIILDPPPFAKSKSALE--GALRGYKEINLRAMQRLAPGGVLATY 350 Query: 656 NNKRGFRMDL------DGLAKLGLKAQEITQKTLSQDFA 688 + K + + D Sbjct: 351 TCSHHMHDAELRGVLAEAATDAKRKVRVLEHCHQPADHP 389 >UniRef50_A1AUW2 SAM-dependent methyltransferase n=10 Tax=Desulfuromonadales RepID=A1AUW2_PELPD Length = 409 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 90/320 (28%), Positives = 138/320 (43%), Gaps = 22/320 (6%) Query: 385 DSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVVVQE 443 + + A RL +L A + +RL +A+ + VD Y +++VQ Sbjct: 69 HERIRLDAAWIRRRLEASLTLRRDHADLGESDAFRLVNAEGDGLPGLTVDCYGQFLMVQL 128 Query: 444 YAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKN-----QYQKLGEKG 498 Y L +++ GI KTRE + ++ + Sbjct: 129 YCAGWRPHLKTLSGELMELLQ----PRGIYEKSRPQKTRELEAARDDKRYGRLLSGESAP 184 Query: 499 EFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGL 558 + L+V E V+L L+TGLFLD R RR L +GK LNLF+YTG+ +V A Sbjct: 185 QRLQVRENGLSFLVSLEQGLNTGLFLDQRRNRRDLMNRVEGKRVLNLFAYTGAFSVAAAS 244 Query: 559 GGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW---LREANEQFDLIFID 615 GAR T+VD+S YLEWA N +N L + H I DCLA L + + FD+I +D Sbjct: 245 AGAR-VTSVDVSAGYLEWARDNFGINRLNPKRHEFITGDCLAVLCQLAQKGQGFDVILMD 303 Query: 616 PPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL------DGLA 669 PP+FS + + L+ LL GG ++ S+N + ++ G Sbjct: 304 PPSFSTTSKSRFTTRG--GTAELVAAALPLLADGGLLIASSNHQKLEVNDYLKELRRGAL 361 Query: 670 KLGLKAQEITQKTLSQDFAR 689 G + + I+ +DF Sbjct: 362 MAGCELRVISLSGQPEDFPY 381 >UniRef50_A8VSD5 Oligopeptide/dipeptide ABC transporter, ATPase subunit n=2 Tax=Bacillus RepID=A8VSD5_9BACI Length = 398 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 70/320 (21%), Positives = 129/320 (40%), Gaps = 18/320 (5%) Query: 383 TPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYN-VAVDRYADWVVV 441 + + + + K + + + +R+++ + + V +D Y + V+ Sbjct: 68 SRKPGEKLNQDFIDRLILKAIGVRQGYYEDASTTAFRVFNGEGDGFGGVIIDYYERYYVI 127 Query: 442 QEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFL 501 Y+ A++ +++ D + +GI K K + + + + L Sbjct: 128 HWYSE----GAYQFKEQFVDSLLRNSDAIGIYEKKRFAKAGQYV-EDDDFVTGEQAPSPL 182 Query: 502 EVTEYNAHLWVNLTDYLDTGLFLDHRIARRM-LGQMSKGKDFLNLFSYTGSATVHAGLGG 560 V E N + V+L D G F D R RR L + +KG+ LN FSYTG +V A LGG Sbjct: 183 VVFENNVSIAVDLNDGAMVGFFHDQREVRRAILEKHAKGRTVLNTFSYTGVFSVFAALGG 242 Query: 561 ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR---EANEQFDLIFIDPP 617 + T VD + E +N L H +I D +L+ F ++ +DPP Sbjct: 243 SLKTVNVDAANRSKEKTAEQFAMNQLDAEDHDIIVDDAFQFLKRTERRGRTFGMVILDPP 302 Query: 618 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL------DGLAKL 671 +F+ +K+ F ++D+ L+ D + G I+ S N G + + Sbjct: 303 SFARTKKT--TFSAKKDYKKLLLDAIAVTEENGIIVASMNHAGVAPQRFRKTVGEAFQEA 360 Query: 672 GLKAQEITQKTLSQDFARNR 691 G+ + + L DF + Sbjct: 361 GVPFRVLESFGLPSDFKTDP 380 >UniRef50_A4S9U5 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S9U5_OSTLU Length = 493 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 66/354 (18%), Positives = 132/354 (37%), Gaps = 30/354 (8%) Query: 363 YKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKW--ARQEGIECYRL 420 Y N + + + R+R+ + E CYRL Sbjct: 131 YGFYN---ETSSYSVRALSQAWERGCEDGDGVVAQRIREAYELRRDLGLVGNERTTCYRL 187 Query: 421 YDADLPEY-NVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVL 479 +++ + + D Y + VV A + D++ A V+ K+ Sbjct: 188 LNSEGDKISGLNADVYGEIVVASSTAAWVEQRRDVILRAFADVLGANTKVVWRRDEKMYE 247 Query: 480 KTRERQKGKN---------QYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIAR 530 +G+N + ++V E +++ TG ++D R R Sbjct: 248 VEGTPWEGENLIDYYDAATGAKVGEAVPSDVKVLEDGVQYAIDIAGGHKTGFYVDQRDNR 307 Query: 531 RMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRA 590 +++ ++++GK L++ YTG ++A LGGA VD S + L+ A++N LNGL + Sbjct: 308 KVMREIARGKRVLDVCCYTGGFALNAALGGASDVVAVDSSESALDMAKKNAELNGLQDK- 366 Query: 591 HRLIQADCLAWLREA-----NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRL 645 ++AD +++ +D++ +DPP F+ +K ++ L K L Sbjct: 367 VNFVRADAFDFMQAEIDAGRAGSYDVVVLDPPKFAPTK--PALKKAIPKYVGLNKRAMTL 424 Query: 646 LRAGGTIMFSNNKRGFRMD-------LDGLAKLGLKAQEITQKTLSQDFARNRQ 692 LR GG ++ + + + G+ A ++ + D + Sbjct: 425 LRPGGILITCSCSGAVTQERLLPKIVENASRASGVSATMLSIRGAGCDQPIDPA 478 Score = 43.7 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 21/58 (36%), Gaps = 4/58 (6%) Query: 258 FYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL----PKGPYGTVLSNPP 311 DS + A+ NA L G+ + + F D G Y V+ +PP Sbjct: 341 VVAVDSSESALDMAKKNAELNGLQDKVNFVRADAFDFMQAEIDAGRAGSYDVVVLDPP 398 >UniRef50_A8J6H0 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8J6H0_CHLRE Length = 472 Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 101/436 (23%), Positives = 163/436 (37%), Gaps = 66/436 (15%) Query: 3 SLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGD-TRLVYQSLMWSRLASRIMLPL 61 S FA+ GLE+++ EL +LG + + GV F Y + + R A R+M L Sbjct: 61 SFFATCHPGLEQVVANELLSLGFRGVEPGRAGVSFVARRLSDGYAANLHLRAAIRVMALL 120 Query: 62 GECKV--------YSDLDLYLGVQ-AINWTEMFNPGATFAVHFSGLNDT-IRNSQYGAMK 111 E ++ LY V A W ++ GA+F+V + T I +Q + Sbjct: 121 AEGELGADPQAGKRGGQALYDMVYEAAPWHDIIPRGASFSVEPRLWSCTDISTTQLVWSR 180 Query: 112 VKDAIVDAFTRKNLPRPNVDRDA--PDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAG 169 VKDA+ D + +P D+ + V +K+ + D+SG+ LH RGYRD Sbjct: 181 VKDAVCDNIRQHRSDKPAPPEKGKVADVPLYVTCYKDHIKVYRDMSGESLHRRGYRDVMH 240 Query: 170 IAPIKETLAAAIVMRSGWQ---------PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHR 220 A + E AA +++ SGW+ G L DPM AP L Sbjct: 241 RAALNEAAAAGVLLMSGWRQALEEAGDGEGLVLADPM---------------REAP-LAE 284 Query: 221 GRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGI 280 G W F W +D A W E A+ R R + G D + A AR AG+ Sbjct: 285 GAWPFQHWGDYDSAAWTEQVEAARARVRP---PWRGRLVGIDVHEGALGLAERQARKAGV 341 Query: 281 GELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGW 340 ++ + D Q + L A L + Q G Sbjct: 342 YNMLELSLADCGQ-----------------------GEDAFLAAAWKSLDGFLYRQCPGA 378 Query: 341 NLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLR 400 + S+ S +PD L+L+ +++ ++ Y + + + A + Sbjct: 379 SASVISGNPDPFKYLKLKPQSKHRLTLSGMEVQVAGYQIRDLASRAAAAAGPR--FAPVE 436 Query: 401 KNLKKFEKWARQEGIE 416 + + A + G + Sbjct: 437 ASGRDRRGAASRAGDD 452 >UniRef50_D0MIF2 Putative RNA methylase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MIF2_RHOM4 Length = 408 Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats. Identities = 91/386 (23%), Positives = 148/386 (38%), Gaps = 15/386 (3%) Query: 5 FASTARGLEELLKTELENLGAVECQVVQGG-VHFKGDTRLVYQSLMWSRLASRIMLPLGE 63 S A G E ++ EL LG C + V + + R R+ L LG Sbjct: 28 VVSCAAGFEPVVAEELRELGHTACYLKPAKLVLPEAGPDASLPLNFFGRTLHRVYLLLGL 87 Query: 64 CKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRK 123 + + D+ Q + + +P FAV S A +V A+V+ Sbjct: 88 GRAPTLQDVRALAQTVPFHAYLHPEQRFAVRAQRHGSHDFTSMDVAREVGSAVVERVQAH 147 Query: 124 NLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVM 183 R D D PD+ + L + + L+ SG LH R +R AP+ TLAAA++ Sbjct: 148 TGRRIRADLDTPDVEIMAELSDDQLLLLLNTSGPPLHRRHHRAFQHFAPLLPTLAAALLR 207 Query: 184 RSGWQPG-TPLLDPMCGSGTLLIEAAMLATDRAPGLH--RGRWGFSGWAQHDEAIWQEVK 240 S + L+DPM G GT+ IEAA+LA + APGL G+ + D W+ ++ Sbjct: 208 LSSFPNNVDLLIDPMAGGGTIPIEAALLARNVAPGLLLPEGQLALFRLSFLDHTAWRRLR 267 Query: 241 AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK 300 A+ + R +D AR ++ + N G+ +T ++ L + Sbjct: 268 HRAERQVRP---RSPVPILAADRYARNVRGMKANLEAMGVAADVTVCAGRAERM-AYLER 323 Query: 301 GPYGT--VLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASP----DLLSC 354 P G +++NPPYG RL + L+ R G + + + + Sbjct: 324 QPTGRRSIVTNPPYGLRLGDPRRIDRLYHDFARACARH-GIAEVVALTPRRDSWLEAFTQ 382 Query: 355 LQLRADKQYKAKNGPLDCVQKNYHVA 380 R + G L+ + Sbjct: 383 AGYRPALVQPVRYGRLEAFALRVEPS 408 >UniRef50_A7NRA9 SAM-dependent methyltransferase n=7 Tax=Bacteria RepID=A7NRA9_ROSCS Length = 402 Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats. Identities = 77/325 (23%), Positives = 128/325 (39%), Gaps = 17/325 (5%) Query: 382 STPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWVV 440 ++ RL R GI YR + + VDRY D V Sbjct: 63 RIFSTRTVPDIAWLRERLTAAWNLRAPL-RAAGITAYRWVFGEGDGVPGIVVDRYNDIAV 121 Query: 441 VQEYAPPKTIDAHKARQRLFDI--IAATISVLGIAPNKLVLKTRERQKGKNQYQ-KLGE- 496 +Q + + + +++ ++ + + G + + GE Sbjct: 122 LQASSAGTLTLIEDVATAILKVDPTVRRVALRMATESRSAIDEGDEGDGDARLRSLYGES 181 Query: 497 KGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHA 556 + V E+ V L TGLFLD R RR + ++ G+ LN F+YTG +++A Sbjct: 182 PPREIVVVEHGIRFAVALHTAQKTGLFLDQRENRRFVEGLAAGRTVLNCFAYTGGFSLYA 241 Query: 557 GLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE---ANEQFDLIF 613 GGAR +VD+ + RNL LN L HR ADC L + A ++FDL+ Sbjct: 242 LRGGARQVVSVDVGKGLASATARNLALNRLDDGRHRFETADCFELLEQYAAAGQRFDLVI 301 Query: 614 IDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD--LDGLAKL 671 +DPP+F+ +R E + QR ++ L R ++ GG + ++ + + LA Sbjct: 302 LDPPSFA--RRKESRYAAQRAYVRLNALGMRCVKPGGLLATASCTTQVGPEAFREALASA 359 Query: 672 G----LKAQEITQKTLSQDFARNRQ 692 G + + I + D Sbjct: 360 GALAERRLRIIHEAGQPLDHPVPAH 384 >UniRef50_A8F4H7 Putative uncharacterized protein n=1 Tax=Thermotoga lettingae TMO RepID=A8F4H7_THELT Length = 382 Score = 248 bits (633), Expect = 7e-64, Method: Composition-based stats. Identities = 69/315 (21%), Positives = 135/315 (42%), Gaps = 20/315 (6%) Query: 385 DSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEY-NVAVDRYADWVVVQE 443 +P + + +R+ + + + + E RL ++ + VD++ ++V+Q Sbjct: 57 TFEPKTIEQILQSRIEQAIHRRRFLLKYEQ--ACRLIYSESDWLAGLIVDKFGPYLVIQI 114 Query: 444 YAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEV 503 T+ K ++ I+ + V GI + K G E + Sbjct: 115 ----NTLGMEKLKELSVKILLQQVEVSGIYEKSDSPARLKEGLEKRSGWIYGNGPEIIYY 170 Query: 504 TEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARS 563 L +L TG FLD R+ R L ++GK +++FSYTG+ +H GA+ Sbjct: 171 RSNGLTLASDL-KGQKTGAFLDQRLNARALFPYAEGKKCVDVFSYTGNFALHLLKYGAKH 229 Query: 564 TTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA---NEQFDLIFIDPPTFS 620 +D S+ L+ A++ ++LNG GR + LI A+ WL+ EQ+DLI +DPP+F+ Sbjct: 230 VKLIDYSQRSLQIADQLMKLNGFEGR-YDLICANAFDWLKRETSLTEQYDLIVLDPPSFA 288 Query: 621 NSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRM-DLDG-----LAKLGLK 674 + +++ +R H + +LL+ G ++ S+ + D + + + Sbjct: 289 KTSSAKES--AERGHKEVNLRAIKLLKKPGLLVSSSCTQILSAFDFERVMQSVASDCKVN 346 Query: 675 AQEITQKTLSQDFAR 689 + + +D Sbjct: 347 LRIAYRGGQPEDHPI 361 >UniRef50_D0LV46 Putative RNA methylase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LV46_HALO1 Length = 412 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 78/293 (26%), Positives = 133/293 (45%), Gaps = 18/293 (6%) Query: 411 RQEGIECYRLYDADLP-EYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISV 469 R G++ RL + + +DRYAD VV P A + D + + Sbjct: 110 RLAGLDGMRLVHGENDYMPGLVIDRYADTGVVMFDGP----GAAGFWEPRIDGVCEGLRR 165 Query: 470 LGIAPNKLVLKT--RERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHR 527 G+ +L + R + G + + + + E A V++ TG FLD R Sbjct: 166 GGVELARLWARPLPRVERGGAGRVLRGDAPPARIPIHEGEARFEVDVRAGQKTGFFLDQR 225 Query: 528 IARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT 587 R ++G+++ G + LNL++YTG +VHA LGGA+ ++VD++R + A N LNGL Sbjct: 226 RNRMLVGELAAGAEVLNLYAYTGGFSVHAALGGAQRVSSVDIARPAIASARDNFALNGLD 285 Query: 588 GRAHRLIQADCLAWLRE---ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKR 644 AH D LA+L +FDL+ +DPP+F+ S+R + R + + + R Sbjct: 286 PDAHEFAAEDALAFLERVQQRGRRFDLVIVDPPSFAPSERAK--PKALRAYGKVNELALR 343 Query: 645 LLRAGGTIMFSNNKRGF------RMDLDGLAKLGLKAQEITQKTLSQDFARNR 691 ++ AGGT++ ++ M A+ G + + Q+ +D Sbjct: 344 VVAAGGTLVSASCSSHVGGADMSEMLAQAAARAGRVVRIVEQRGADRDHPVRP 396 >UniRef50_Q12EM8 SAM-dependent methyltransferase n=4 Tax=Comamonadaceae RepID=Q12EM8_POLSJ Length = 422 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 69/352 (19%), Positives = 125/352 (35%), Gaps = 47/352 (13%) Query: 376 NYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDR 434 + D + A + R+ + +K + + RL + + VDR Sbjct: 57 KIRARVWSFDESQRIDASFFVARIDQAIKARD--LFDIQSDGRRLVHGESDGLPGLVVDR 114 Query: 435 YADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKL 494 YAD +V Q + + + + + + A + + + Sbjct: 115 YADTLVAQF----SSCGTERWKSVIVEALLAQTGLTRLYERSDASVRSLEGLPEATGWLS 170 Query: 495 GEK--------------------------GEFLEVTEYNAHLWVNLTDYLDTGLFLDHRI 528 G G + +TE++ L +++ TG +LD R Sbjct: 171 GAPTLVASRTTLPPEGANFPWGGPAENCSGTEIIITEHDWKLSLDVAQGHKTGFYLDQRD 230 Query: 529 ARRMLGQMSKGK---DFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNG 585 +R+ ++ + LN + YTG TV A GGA+ T++D S L+ A+ N+ LNG Sbjct: 231 SRQRFAAYTRRRQFERVLNCYCYTGGFTVAALAGGAKHVTSIDSSGPALDRAKANVALNG 290 Query: 586 LTGRAHRLIQADCLAWLR---EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDL 642 ++ AD A LR + FD I +DPP F+ + + A R + + + Sbjct: 291 FDASRTTMLDADVNAMLRQYQKEGRTFDAIVLDPPKFAPT--VTHAERAARAYKDINRLA 348 Query: 643 KRLLRAGGTIMFSNNKRGFRMDL------DGLAKLGLKAQEITQKTLSQDFA 688 +L GG + + G DL G+ A + + D Sbjct: 349 LAILEPGGVLFTYSCSGGISADLFHKIVASAGTDAGVDAFISERMGGAPDHP 400 >UniRef50_B0S9E6 SAM-dependent methyltransferase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0S9E6_LEPBA Length = 393 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 71/323 (21%), Positives = 127/323 (39%), Gaps = 26/323 (8%) Query: 381 ESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRYADWV 439 S + + + + ++ K L +RL+ ++ + VD Y D Sbjct: 64 FSFDPKQDGINRDFWFSKWEKILYTKRSLLP-NDTNGFRLFHSEGDGVPGIVVDVYDDTA 122 Query: 440 VVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRE-RQKGKNQYQKLGEKG 498 V+Q P RL + + + G ++ K + K ++ Sbjct: 123 VLQLKTPGAI--------RLKENLVTFLEKFGFV--TILEKREKTDSKHGDEISFYKGDK 172 Query: 499 EFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGL 558 E + T TG FLD R R +LG+ +K K LN F+Y+G+ +V+A L Sbjct: 173 AETVFKENGIQFISDTTKGQKTGFFLDQRENRSLLGRYAKNKIILNTFAYSGAFSVYALL 232 Query: 559 GGARSTTTVDMSRTYLEWAERNLRLNGLTGR----AHRLIQADCLAWLREANEQ-FDLIF 613 GA+ ++D+S+ LE E+NL LNG + H+ + DC +L++ + +D I Sbjct: 233 NGAKMVHSLDISKQALELCEKNLELNGFSQELLAVKHKSLVMDCFDYLKKMDSGIYDCII 292 Query: 614 IDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLD------G 667 +DPP F +K + R + + ++ GG I + + DL Sbjct: 293 LDPPAF--TKNIATVIQASRGYKDINMRAISKIQDGGLIFTFSCSQHISFDLFKKIVFGA 350 Query: 668 LAKLGLKAQEITQKTLSQDFARN 690 K + + T S D + + Sbjct: 351 AKDAKKKVRILHHLTQSPDHSYS 373 >UniRef50_Q0ABR6 SAM-dependent methyltransferase n=15 Tax=Gammaproteobacteria RepID=Q0ABR6_ALHEH Length = 403 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 73/327 (22%), Positives = 121/327 (37%), Gaps = 20/327 (6%) Query: 377 YHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVDRY 435 + DS+ + +RL+ L E+ YRL + + +DR+ Sbjct: 67 ICARLVSRDSRYRLDESLLVHRLKLALGLRERLFDAPY---YRLVHGEADGLPGLVIDRF 123 Query: 436 ADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLG 495 D VVQ + R + + + + + Q G Sbjct: 124 GDACVVQVNTA----GMERVRDSIVTALGRVLGEGPVLLRCDSAVRELEGLTRYQAWGSG 179 Query: 496 EKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVH 555 + + LEV E V T TG + DHR+ R+ L G+ L++FSY G+ V Sbjct: 180 PEAQTLEVVENGVRFQVPATTGQKTGWYYDHRMNRQALRPWVPGRRVLDVFSYMGAWGVQ 239 Query: 556 AGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW---LREANEQFDLI 612 A + GA VD S L+ N LNG++ +Q D LR+ANE+FD++ Sbjct: 240 AAVAGAAEVFCVDSSEQALDGVAENAALNGVSD-QVAGVQGDAFDALAELRQANERFDVV 298 Query: 613 FIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD-LDGLAKL 671 +DPP F K+ D + + L + +LL G ++ ++ L A+ Sbjct: 299 VVDPPAFIKRKK--DFRQGFKAYQRLNRMAMQLLNKEGLLVTASCSAHLPEQRLLDAAQA 356 Query: 672 G-----LKAQEITQKTLSQDFARNRQI 693 G + + D + I Sbjct: 357 GARHLERSLRVVALGHQGPDHPVHPAI 383 >UniRef50_B9HYB4 Predicted protein n=11 Tax=Embryophyta RepID=B9HYB4_POPTR Length = 387 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 61/343 (17%), Positives = 119/343 (34%), Gaps = 19/343 (5%) Query: 363 YKAKNG--PLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKW-ARQEGIECYR 419 + N + S + + R ++ + YR Sbjct: 34 WGLYNSVSMFCVRLMQLEEEATRDPSCALDMKKLLETRTNAAIELRRRLGLPSSHTNAYR 93 Query: 420 LYDADLP-EYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLV 478 L +++ + VD + D V+ A + + I I+ + P+ + Sbjct: 94 LVNSEGDRLSGLIVDVFGDLAVIASSAAWVENYKPEVEACINRI--DGINHINWRPSVDI 151 Query: 479 LKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSK 538 LK + E ++V E ++L TG + D R R+ + +S Sbjct: 152 LKEEGMDVSDMKEVHPSTCPERIKVMENGISYAISLV-GQKTGFYADQRENRQFISTISN 210 Query: 539 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADC 598 G+ L++ Y+G ++A GGA T VD S LE A N+ LN L ++ D Sbjct: 211 GQKVLDICCYSGGFALNAAHGGAIDVTGVDTSMPALELARENIVLNNLDPGRISFLREDA 270 Query: 599 LAWLR---EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFS 655 + +++ NE +D++ +DPP + K++ + + RL + GG +M Sbjct: 271 IQFMKGALSRNESWDIVILDPPKLAPRKKVLQNASGM--YRNMNSMALRLTKRGGLLMTC 328 Query: 656 NNKRGFRMD-------LDGLAKLGLKAQEITQKTLSQDFARNR 691 + + G K + + + D + Sbjct: 329 SCSGAMTQSGMFLRVLQGAASMAGRKISVLREAGAASDHPIDP 371 >UniRef50_Q30VQ2 SAM-dependent methyltransferase n=5 Tax=Desulfovibrio RepID=Q30VQ2_DESDG Length = 396 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 70/320 (21%), Positives = 119/320 (37%), Gaps = 20/320 (6%) Query: 383 TPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLP-EYNVAVDRYADWVVV 441 + A R+ + L + + YR+ A+ + VDRY D++V Sbjct: 69 SQQPDTPFDAGLLHRRITEALAMRQMIFDRPY---YRMVFAEGDWLPGLIVDRYGDFLVA 125 Query: 442 QEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFL 501 Q A A+ ++ ++ + G+ Q G + L Sbjct: 126 QLTTA----GAEAAKPQITAVLKDVVRPRGLLYRNDSANRGMEGLKSYVEQAFGHIPDTL 181 Query: 502 EVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGA 561 E+ E + L + TG F D RI RR ++GK L+ F Y G V A GA Sbjct: 182 EIEENGVRFYAPLMEGQKTGWFYDQRINRRDFASFAQGKKVLDAFCYAGGFGVTAAAAGA 241 Query: 562 RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA---WLREANEQFDLIFIDPPT 618 TT +D S L+ E N LN ++G + + D L LR+ ++D+I +DPP Sbjct: 242 AQTTFLDASPLALQTVEANAALNRVSGS-VKTVAGDALETLARLRDQGRRYDVICVDPPA 300 Query: 619 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL------DGLAKLG 672 F ++ + + + + + L GG +M + + D + G Sbjct: 301 FIKRRKHQK--QGLKAYQRVNELAMELAEDGGILMSCSCSQHLSADELRRVLNRAARRAG 358 Query: 673 LKAQEITQKTLSQDFARNRQ 692 + Q +TQ D + Sbjct: 359 CRIQTLTQGHQGPDHPVHPA 378 >UniRef50_C3WGE6 SAM-dependent methyltransferase n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WGE6_FUSMR Length = 388 Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats. Identities = 68/336 (20%), Positives = 136/336 (40%), Gaps = 31/336 (9%) Query: 366 KNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADL 425 KN + + ++ Y ++++++ +RL ++ Sbjct: 56 KNSKITVRML-------EHNKNKSIDLNWYNDKIKQSFTLRNSL--NIESNAFRLIHSES 106 Query: 426 P-EYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDII-AATISVLGIAPNKLVLKTRE 483 + VD + ++VV+Q T+ K + + + ++ GI + Sbjct: 107 DFLPGLIVDYFNEYVVIQI----STLGMEKDKDLIIQALINNIPNLKGIYEKSESDGRKL 162 Query: 484 RQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFL 543 + GE + +E+ E A+ ++L TG + D R R ++G+++KGK FL Sbjct: 163 EGLPEKIQVLWGEIPDTIEIFEGKANFIIDL-KGQKTGFYSDQRENRILIGKLAKGKSFL 221 Query: 544 NLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR 603 ++ SYTG ++HA GA S T +D+S L A++NL+ I+ + LR Sbjct: 222 DVCSYTGGFSLHAMSNGANSATLIDISEDALNVAKKNLK----NYNNIEFIKGNIFNILR 277 Query: 604 ---EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRG 660 + N ++D++ +DPP + SKR D + + ++ + +L GG + + Sbjct: 278 DLVKENRKWDIVSLDPPKLAPSKRDLD--KALKAYKDIILNGIKLTNKGGLLAIYSCSGA 335 Query: 661 FRMDL------DGLAKLGLKAQEITQKTLSQDFARN 690 + + G+KA I Q S + Sbjct: 336 VTSNDLRMALAYAVKDAGVKATIIHQLHQSSCHPIS 371 >UniRef50_C9RKQ5 Putative RNA methylase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKQ5_FIBSS Length = 504 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 87/443 (19%), Positives = 151/443 (34%), Gaps = 97/443 (21%) Query: 2 NSLFASTARGLEELLKTELEN-LGAVECQV----VQGGVHFKGDTRLVYQSLMWSRLASR 56 + A + G E+ L ELE LG + G V F ++ + SR A+R Sbjct: 18 HRFLAVSPLGFEQTLSRELEIILGESATEQPHATGDGKVEFTTKLTEAWKVVAVSRTANR 77 Query: 57 IMLPLGECKVYSDLDLYLGVQAINWTEMFNP---------GATF-------------AVH 94 +++ + K + DL I W F+ + +H Sbjct: 78 VLMEIANFKAENFRDLEKKASEIPWELYFDKKTGNALQTRDESIIPSNSKLVTSNLPHIH 137 Query: 95 FSGLNDTIRNSQYGAMKVKDAI------------VDAFTRKNLPRPNV---DRDAPDIRV 139 + + + +S A ++ I A PR + + + Sbjct: 138 VTCKHSRLYHSDAIAERLYKIIEGVSLPLASADTASATPSAGTPRNAPAQNENRSIQQNL 197 Query: 140 NVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGW--------QPGT 191 V + +I LDL+G+ L+ RG+ AP+KET+A+A++ + + QP T Sbjct: 198 YVNFLDDRCTIWLDLAGEELYKRGFERFVNDAPLKETIASAMIFEAFYTASLTTNHQPQT 257 Query: 192 PLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEV------------ 239 L+DPM GSGT +EAA +A PG R + EA W + Sbjct: 258 TLIDPMSGSGTFSLEAACIANKIIPGTCRD-FALKHQPAFKEATWNFLIRQETRDDKCVG 316 Query: 240 -----------------KAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGE 282 + + SD R + + N + Sbjct: 317 RVSRPCLHEHDRVQHLGLERSDNPKTNSETAAIAKIITSDISERAVSIIKHNIECCPLAS 376 Query: 283 L----ITFEVKDVAQLTNPLPKGPYG----TVLSNPPYGERLDSEPALIALHSLLGRIMK 334 + I + KD T G ++ NPPYG+RL + L++ +G+ + Sbjct: 377 ISPAPIAPQQKDFFSYTAKEIVDACGDTSPILVLNPPYGKRL--DFDAPKLYTQIGKKLT 434 Query: 335 ------NQFGGW-NLSLFSASPD 350 + FG +++ + D Sbjct: 435 ELARDLHNFGKTLTVAILAPKDD 457 >UniRef50_B2UZQ1 Methyltransferase n=3 Tax=Clostridium botulinum RepID=B2UZQ1_CLOBA Length = 407 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 74/315 (23%), Positives = 139/315 (44%), Gaps = 19/315 (6%) Query: 389 AMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYN-VAVDRYADWVVVQEYAPP 447 + + ++LR K K + +R+++ + +D + ++ ++ Y+ Sbjct: 74 NFDNKFFYDKLRNAFSKRMKLYHSKDTNAFRVFNGSGDGIGGLTIDYFDEYYLITWYS-- 131 Query: 448 KTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYN 507 + ++ + I + +S GI K + Y + E L V E N Sbjct: 132 --KGMYAFKEYIIKSIKSLVSFEGIYEKKRFEDNGMVVDEDSYYCGQ-KAPEPLVVKENN 188 Query: 508 AHLWVNLTDYLDTGLFLDHRIARRMLGQ-MSKGKDFLNLFSYTGSATVHAGLGGARSTTT 566 + + L D G+FLD + R+ + S GK LN FSYTG+ ++ A +GGA TT+ Sbjct: 189 VNFAIYLNDGAMVGVFLDQKDVRKSIKNTYSNGKRVLNTFSYTGAFSMAAAMGGAI-TTS 247 Query: 567 VDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA---NEQFDLIFIDPPTFSNSK 623 VD++ L+ N +N + H +I D + +EA N++FD++ +DPP+++ SK Sbjct: 248 VDLAGRSLKKTIENFEINKIDSNNHEIIVEDIFHYFKEAKKDNKKFDVVILDPPSYATSK 307 Query: 624 RMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD------LDGLAKLGLKAQE 677 ++ F ++ L+K + G I+ S N F M+ + K Sbjct: 308 --DNTFSAASNYKDLVKSAIDVTEDEGVIVCSTNCSTFNMNKFKKFIDKAFLESNKKYFI 365 Query: 678 ITQKTLSQDFARNRQ 692 + + TL DFA + + Sbjct: 366 LEEHTLPDDFAVSDK 380 >UniRef50_C1ZEN9 Predicted SAM-dependent methyltransferase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZEN9_PLALI Length = 393 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 68/341 (19%), Positives = 119/341 (34%), Gaps = 26/341 (7%) Query: 363 YKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGI-ECYRLY 421 Y N + Y E + + + +R+R K+ + RL Sbjct: 50 YGLYNSSSRIRVRIYSWNEDQ-----PLAEDFWRSRVRMACDLRRKFMPTPTVMNGSRLI 104 Query: 422 DADLP-EYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLK 480 ++ + VDRY DW++ Q + L D + G Sbjct: 105 SSEADFLSGLTVDRYGDWLLAQLGSHALQSRME----LLVDELMRQTQASGCWLRTEKGI 160 Query: 481 TRERQKGKNQYQKLGE-KGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKG 539 + GE F+ V E+ V+L D TG +LD R R Q + G Sbjct: 161 RQAEGMPLIDGLFRGETPPAFIPVEEHGLVYHVDLVDGQKTGFYLDQRENRFRAAQFASG 220 Query: 540 KDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADC 598 + L+L Y+ ++A G VD S+ +E A N+ NGL R + + D Sbjct: 221 -NMLDLCCYSAGFGMNALRHGEVTHVIGVDTSKIAVENATANVTRNGLADR-YEVRHGDA 278 Query: 599 LAWL---REANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFS 655 L R +F I +DPP S+ D+ + + +L + +L GT++ Sbjct: 279 FEVLTEFRNQGVRFQTIVLDPPKLVKSRSTMDS--GLKGYHSLNRLALDVLEPQGTLVTC 336 Query: 656 NNKRGFRMDL------DGLAKLGLKAQEITQKTLSQDFARN 690 + DL + + + + + + S D ++ Sbjct: 337 SCSGLVTHDLFQQVLREAAWQARRELKILEARGPSPDHPQS 377 >UniRef50_Q1Q0N9 Similar to SAM-dependent methyltransferase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q0N9_9BACT Length = 408 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 62/330 (18%), Positives = 120/330 (36%), Gaps = 20/330 (6%) Query: 370 LDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWAR-QEGIECYRLYDADLPE- 427 + + N + T + + E +L E+ + +CYRL + Sbjct: 51 IYNRKSNIGIRLLTENVTEHLCKEFILKKLEYAKALREEVLGIHKTSDCYRLVHGEADGL 110 Query: 428 YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKG 487 + +D++A +VV+ Y+ + + + + Sbjct: 111 SGLIIDKFAHVIVVEPYSAGYIGIMD----WIVSSLKTLYPDSNVTVRPDARNAEKEGVD 166 Query: 488 KNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFS 547 ++ ++ + + + E N + +N TG FLD R R L + + K+ L+ F Sbjct: 167 FSKVSRIYPCPDSVIICENNMRMMINFKSGHKTGFFLDQRENRLALSLLCRDKEVLDCFC 226 Query: 548 YTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE--- 604 YTG + A GARS T VD+ LE A+ N RLN A + D +LR+ Sbjct: 227 YTGGFGISAMRAGARSATGVDLDEKALETAKENARLN---SAAISYVHIDVFDFLRKMYN 283 Query: 605 ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD 664 + Q D++ +DP + + R + + + +++R GG ++ + Sbjct: 284 SGTQTDVVILDPAKLAGC--TGEIKRAMRTYGDINRLGMQVVRPGGILLTCSCSGLISEK 341 Query: 665 L------DGLAKLGLKAQEITQKTLSQDFA 688 A+ G+ Q + D Sbjct: 342 DFLSILTRSAAEAGVILQIFKITGAAPDHP 371 >UniRef50_A9GP63 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GP63_SORC5 Length = 666 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 86/333 (25%), Positives = 138/333 (41%), Gaps = 19/333 (5%) Query: 375 KNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPE-YNVAVD 433 + P A +R+ ++ AR RL +V+VD Sbjct: 254 VFEAWLAAAPVDPYAGGVAAVERAMREAAERRYGIARAGDTTALRLVHGAGDGLPSVSVD 313 Query: 434 RYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPN------KLVLKTRERQKG 487 Y + +VV + + R + D G+ +++ R + Sbjct: 314 LYGEHLVVSLFGAGEGEPGAPPRDLVLDAAHRL-GAKGVYLKARPKHASVIVDARREEFA 372 Query: 488 KNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFS 547 + + E L V E+ V L D L TG+FLD R RR + ++++G LNLF+ Sbjct: 373 PRHAVRGEDAPEELTVLEHGLPFKVRLGDGLSTGIFLDQRENRRRVRELARGARVLNLFA 432 Query: 548 YTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR---E 604 YTG+ TV A GGAR + TVD+SR + WA NL G AH +++AD WL+ + Sbjct: 433 YTGAFTVAAVAGGARESVTVDVSRGVVAWARDNLAAIGADPAAHVVVEADVFPWLKAAAQ 492 Query: 605 ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD 664 ++ +FDL+ +DPP+F+ +K+ F D AL R+L GG ++ N RG Sbjct: 493 SDRRFDLVVLDPPSFATTKKSR--FSAASDFGALAALAFRVLAPGGRLLACTNHRGIARA 550 Query: 665 L------DGLAKLGLKAQEITQKTLSQDFARNR 691 + + G ++ DF Sbjct: 551 RFRRHLHEAAREAGCDVVQMKDLPDPVDFPSEP 583 >UniRef50_D2QYD2 Putative uncharacterized protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QYD2_9PLAN Length = 428 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 67/357 (18%), Positives = 127/357 (35%), Gaps = 41/357 (11%) Query: 363 YKAKNGPLDCVQKNYHVA---ESTPDSKPAMVAEDYTNRLRKNLKKFEKWAR-QEGIECY 418 Y N + N + + L+ ++ + E Y Sbjct: 63 YDLDNQMIGYGLFNPRSEIAIRMIRFEYELPDDQFWDELLKSAVQLRRDVLKLDEVTNSY 122 Query: 419 RLYDADLPE-YNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKL 477 R+ A+ + VDR+ + + ++ A + +RL ++ ++L +P L Sbjct: 123 RVIHAEADGLPGLVVDRHGSVLSAEAFSLAMYQRAPEILERLSKLLGTEQTILRTSPASL 182 Query: 478 VLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMS 537 ++ + + G + + E+ V+ + TG F D R R+ L Sbjct: 183 -----AQEGFEAEPVITGTMPSRVVIEEFGTRFKVDFAEGHKTGFFCDQRENRKQLASFC 237 Query: 538 KGKDFLNLFSYTGSATVHAGL-GGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQA 596 K K L+L YTG V A GGA VD+ L+ A+ N LN + R +QA Sbjct: 238 KDKTVLDLCCYTGGFAVQAKKLGGASEVIGVDLDEEPLKLAKENANLNQV---RCRFVQA 294 Query: 597 DCLAWLRE---ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIM 653 D A++R+ + +FD++ +DPP S+ + + R H AL + +L+ GG ++ Sbjct: 295 DAFAYMRDMQSSGRKFDVVVLDPPKLIRSRA--EIEEGTRKHFALNRLAMQLVAPGGVML 352 Query: 654 FSNNKRGFRM----------------------DLDGLAKLGLKAQEITQKTLSQDFA 688 + + + Q ++ + D Sbjct: 353 SCTCAGLLPLSEFLQLIYAAARQAGPEVLAATEEHKARYAARQVQIFSKSGAAADHP 409 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.150 0.432 Lambda K H 0.267 0.0459 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,578,006,093 Number of Sequences: 3077464 Number of extensions: 209226674 Number of successful extensions: 658389 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 3073 Number of HSP's successfully gapped in prelim test: 9141 Number of HSP's that attempted gapping in prelim test: 630015 Number of HSP's gapped (non-prelim): 23931 length of query: 702 length of database: 1,040,396,356 effective HSP length: 136 effective length of query: 566 effective length of database: 621,861,252 effective search space: 351973468632 effective search space used: 351973468632 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 97 (41.8 bits)