17 c1rnlA_ Probab=99.90   E-value=4.8e-24  Score=154.39  Aligned_columns=197  Identities=25%

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC-CCCCC
Q ss_conf             98769997699899999999999889--8999999989999997408996898604678657751122211111-22211
Q batch____         9 NTPRILIVEDEPKLGQLLIDYLRAAS--YAPTLISHGDQVLPYVRQTPPDLILLDLMLPGTDGLTLCREIRRFS-DIPIV   85 (240)
Q Consensus         9 ~~~rILivdDd~~~~~~l~~~L~~~g--~~V~~a~~~~eal~~~~~~~~DiiilD~~mp~~~g~~~~~~~r~~~-~~~~i   85 (240)
                      +++|||||||||.++.+++.+|++.+  ..|.+|.|+.+|++.+.+..||++++|+.||+++|...++.++... ..+++
T Consensus         1 ~pi~Ilivdd~~~~~~~l~~~L~~~~~~~~v~~a~~~~eal~~~~~~~pdiilld~~l~~~~g~~~~~~~~~~~~~~~~~   80 (200)
T c1rnlA_           1 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIV   80 (200)
T ss_dssp             CCEEEEEECSCHHHHHHHHHHHHTCTTEEEEEEESSHHHHHHHHHHHCCSEEEEETTCGGGCHHHHHHHHTTSCCCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf             97089997499899999999998489817999978989999999871997554211111000136899974203100123


Q ss_pred             CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             23333788785553201333331013443221466664421033332111111222222212222223332100012222
Q batch____        86 MVTAKIEEIDRLLGLEIGADDYICKPYSPREVVARVKTILRRCKPQRELQQQDAESPLIIDEGRFQASWRGKMLDLTPAE  165 (240)
Q Consensus        86 ~l~~~~~~~~~~~~~~~g~~d~i~Kp~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e  165 (240)
                      ++++.............+..++..++.....+..........................                .++.+|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~lt~re  144 (200)
T c1rnlA_          81 VFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASL----------------QLTPRE  144 (200)
T ss_dssp             EECSCSCHHHHHHHHHTTCSEEECTTSCHHHHHHHHHHHHHSCCCCCTTTHHHHHHHC----------------CCCHHH
T ss_pred             CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----------------CCCCCC
T ss_conf             4445310111000011222222100122222222222222222222222221111111----------------122211


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf             21111122221223308999998605567886059999999999971005898216998768662
Q batch____       166 FRLLKTLSHEPGKVFSREQLLNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAEQSFIRAVYGVGY  230 (240)
Q Consensus       166 ~~~l~~l~~~~~~~~s~~~i~~~v~~~~~~~~~~tv~~~i~rLR~KL~~~~~~~~~I~tvrg~GY  230 (240)
                      ..++..+.    ...|..+|++.+     +++++||++|+++|++||+..++.+......+..-|
T Consensus       145 ~~vl~~~~----~g~s~keIA~~L-----~iS~~TV~~h~~~i~~KL~v~nr~el~~~a~~~gl~  200 (200)
T c1rnlA_         145 RDILKLIA----QGLPNKMIARRL-----DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF  200 (200)
T ss_dssp             HHHHHHHH----TTCCHHHHHHHH-----TCCHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCC----CCCCHHHHHHHH-----CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
T ss_conf             11122245----677689989886-----887069999999999981799889999999981788