40 c2nyjA_ Probab=99.83   E-value=2.7e-22  Score=128.28  Aligned_columns=194  Identities=14%

Q ss_pred             HHHHHHHHHCCHHHHHHHHH-------CCCCCCCC-CCCCCEECC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             37999998099999999998-------67667862-768885011---22222222222222222222222222222222
Q batch____         8 ADYLLAAQQGDIDKVKTCLA-------LGVDINTC-DRQGKTAIT---LASLYQQYACVQALIDAGADINKQDHTCLNPF   76 (201)
Q Consensus         8 tpL~~A~~~g~~~~v~~Ll~-------~Gadin~~-d~~g~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (201)
                      ||||.||.+|++++|+.||+       ++.|+... +..|.||+|   .++..+.......+..................
T Consensus         6 t~L~~Av~~g~~~~v~~LL~~~~~~~~~~~~~~~~~~~~G~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (244)
T c2nyjA_           6 RSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAXLNLHNGQNDTIALLLDVARKTDSLKQFVNASY   85 (244)
T ss_dssp             HHHHHHHHHTCSTTTTTHHHHHHHHCCCTTSGGGSCTTTCCCHHHHHHHCCBTTBCHHHHHHHHHHHTTTCSHHHHTCBC
T ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHCCCCHHHH
T ss_conf             08999998199999999999765214556783321888878888999998632188888763211000122000000000


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------------------------------CCCCCCCCCCC
Q ss_conf             2222222222222222222222222222222222222--------------------------------22222222222
Q batch____        77 LISCLNDDLTLLRIILPAKPDLNCVTRFGGVGLTPAC--------------------------------EKGHLSIVKEL  124 (201)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~  124 (201)
                      .....................................                                ...........
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (244)
T c2nyjA_          86 TDSYYKGQTALHIAIERRNXTLVTLLVENGADVQAAANGDFFKKTKFGELPLSLAACTNQLAIVKFLLQNSWQPADISAR  165 (244)
T ss_dssp             CSSSSCSCBHHHHHHHTTCHHHHHHHHTTTCCTTCCCCSGGGSSCCCCCSHHHHHHHTTCHHHHHHHHTCSSCCCCTTCC
T ss_pred             HHHHCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCCC
T ss_conf             00200488455667863176400023331000123333333202210441133332101221110000000101123432


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC
Q ss_conf             22222222222222222222222222221111004899997797787779853698999998199999999997789
Q batch____       125 LAHTEINVNQTNHVGWTPLLEAIVLNDGGIKQQAIVQLLLEHGASPHLTDKYGKTPLELARERGFEEIAQLLIAAGA  201 (201)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GA  201 (201)
                      .....................+.+..+...+...++..|++.|+++|.+|++|+||||+|+++|+.++|++||++.+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~lL~~~~a~~n~~d~~G~TpL~lAa~~G~~~ivk~LL~~e~  242 (244)
T c2nyjA_         166 DSVGNTVLHALVEVADNTVDNTKFVTSXYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREI  242 (244)
T ss_dssp             CTTCCCHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTCTTCCGGGCCCSSCCCHHHHHHHHTCHHHHHHHHHHTT
T ss_pred             CCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCC
T ss_conf             12245833445530344435202456640596999999861788676788975778999998196999999983636