18 c1vciA_ Probab=100.00  E-value=0  Score=317.76  Aligned_columns=198  Identities=30%

Q ss_pred             EEEEEEEEECCCCCCCCCEEEEEECCEEEECCCCEEEEECCCCCCCEEECCCCCCCEECCCEEEEECCCCCCCCCCCCCH
Q ss_conf             79942799808887787416866555347879978999848999830100013686000332899758000113565542
Q batch____         2 INVQNVSKTFILHQQNGVRLPVLNRASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPA   81 (226)
Q Consensus         2 i~i~nls~~y~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLlk~l~g~~~~~~G~I~~~~~~~~~~~~~~~~   81 (226)
                      |+++||+|+|+.       .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+.....+.   
T Consensus         7 i~~~~l~~~y~~-------~~~L~~isl~i~~Ge~~~l~G~nGsGKsTll~~l~g~~~p~~G~i~~~g~~~~~~~~~---   76 (353)
T c1vciA_           7 VKLENLTKRFGN-------FTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPK---   76 (353)
T ss_dssp             EEEEEEEEEETT-------EEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCGG---
T ss_pred             EEEEEEEEEECC-------EEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHH---
T ss_conf             999418998488-------8986323246889978999879998888999999668747600799888887457832---


Q ss_pred             HHHHHHHCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHH
Q ss_conf             33345311442388730343421202221013343455543321111221122222322100000011482234647766
Q batch____        82 RKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNIA  161 (226)
Q Consensus        82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~Gq~qr~~la  161 (226)
                             .+.+++++|      +.++.+|+.+...  ..+......+..+.++.+++ ....++++.+||+||+||++||
T Consensus        77 -------~~~~~~~~~------~~~~~~n~~~~~~--~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~LSgGq~qrv~ia  140 (353)
T c1vciA_          77 -------DRNISMVFQ------HMTVYENIAFPLK--KFPKDEIDKRVRWAAELLQI-EELLNRYPAQLSGGQRQRVAVA  140 (353)
T ss_dssp             -------GTTEEEECC------CCCHHHHHHTTCC--CCCHHHHHHHHHHHHHHTTC-GGGTTCCGGGCCSSCHHHHHHH
T ss_pred             -------HCEEECCCC------CCEEEECCCCCCH--HHHHHHCCHHHHHHHHHCCC-CEEECCCCEECCCCHHHHHHHH
T ss_conf             -------302202333------2000001211210--00011000025787631385-1011025203576615768888


Q ss_pred             HHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHH-HHCCCEEEEEECCHHHHHHHCCEEEECCCC
Q ss_conf             6544046404742664388999999999999999-986987999929989999858999983689
Q batch____       162 RGFIVDYPILLLDEPTASLDAKNSAAVVELIREA-KTRGAAIVGIFHDEAVRNDVADRLHPMGAS  225 (226)
Q Consensus       162 ~al~~~p~ililDEpt~glD~~~~~~i~~~l~~~-~~~g~tii~ish~~~~~~~~~DrI~vm~~G  225 (226)
                      |||+.+|+++||||||++||+..+..+++.|+++ ++.|+|+|++|||++++..+||||+||++|
T Consensus       141 ral~~~p~llllDEP~s~LD~~~~~~~~~~l~~~~~~~g~tvi~vtH~~~~~~~~~drv~vl~~G  205 (353)
T c1vciA_         141 RAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRG  205 (353)
T ss_dssp             HHHTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHHCCEEEEEESCHHHHHHHCSEEEEEETT
T ss_pred             HHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHCCEEEEEECC
T ss_conf             98507865999956101988899999999999999973982467730578888644889991047


