Phyre 2 alignment of P0AD83 with c3r90E_

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Job Description | P0AD83
Confidence | 0.66% | Date | Thu Jan 5 11:20:16 GMT 2012
Rank | 97 | Aligned Residues | 24
% Identity | 29% | Template | c3r90E_
PDB info | PDB header:rna binding protein | Chain: E: PDB Molecule:malignant t cell-amplified sequence 1; | PDBTitle: crystal structure of malignant t cell-amplified sequence 1 protein
Resolution | 1.70 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . |  | . | . | . | 40 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Query Sequence |  | L | P | F | F | F | P | L | I | T | H | S | Q | P | L | N | R | G | A | . | F | F | C | P | G | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | P | H | Q | Q | V | D | K | G | A | I | K | F | V | L | S | G | A | N | I | M | C | P | G | L
Template Known Secondary structure |  | S |  |  |  |  |  |  | G | G | G |  |  |  |  | T | T | T |  |  |  |  | T |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 92 | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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