Phyre 2 alignment of P0AD83 with c2wx6B_

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Job Description | P0AD83
Confidence | 40.08% | Date | Thu Jan 5 11:20:16 GMT 2012
Rank | 1 | Aligned Residues | 29
% Identity | 41% | Template | c2wx6B_
PDB info | PDB header:oxidoreductase | Chain: B: PDB Molecule:peroxidase ycdb; | PDBTitle: x-ray crystallographic structure of e. coli apo-efeb
Resolution | 2.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . |  | 40 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
Query Sequence |  | F | V | L | P | R | L | K | K | D | A | G | L | P | F | F | F | P | L | I | T | H | S | Q | P | L | N | R | G | A | F | F | C | . | P | G | V | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | V | Q | K | R | L | N | G | E | A | . | . | . | . | . | . | . | L | E | E | Y | V | K | P | I | G | G | G | Y | F | F | A | L | P | G | V | K
Template Known Secondary structure |  |  |  |  |  |  | T | T | T |  | G | . | . | . | . | . | . | . | G | G | G | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 346 | . | . | . | 350 | . | . | . | . | . |  |  |  |  |  |  |  | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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