Phyre 2 alignment of P10903 with c3hfxA_

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Job Description | P10903
Confidence | 2.34% | Date | Thu Jan 5 11:32:22 GMT 2012
Rank | 64 | Aligned Residues | 28
% Identity | 7% | Template | c3hfxA_
PDB info | PDB header:transport protein | Chain: A: PDB Molecule:l-carnitine/gamma-butyrobetaine antiporter; | PDBTitle: crystal structure of carnitine transporter
Resolution | 3.15 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 435 | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | P | V | G | A | M | K | V | F | L | I | F | Y | I | A | C | V | V | I | T | W | A | V | Y | G | R | H | S | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | H | W | G | P | L | P | W | A | T | Y | S | F | L | S | V | A | F | A | Y | F | F | F | V | R | K | M | E
Template Known Secondary structure |  |  |  | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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