Phyre 2 alignment of P10903 with c3db3A_

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Job Description | P10903
Confidence | 5.12% | Date | Thu Jan 5 11:32:22 GMT 2012
Rank | 19 | Aligned Residues | 21
% Identity | 29% | Template | c3db3A_
PDB info | PDB header:ligase | Chain: A: PDB Molecule:e3 ubiquitin-protein ligase uhrf1; | PDBTitle: crystal structure of the tandem tudor domains of the e3 ubiquitin-2 protein ligase uhrf1 in complex with trimethylated histone h3-k93 peptide
Resolution | 2.40 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 9 | 10 | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | 20 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | A | T | G | A | V | I | T | D | W | . | . | . | . | . | . | . | . | . | . | . | . | . | R | P | E | D | P | A | F | W | Q | Q | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | A | R | A | R | T | I | I | K | W | Q | D | L | E | V | G | Q | V | V | X | L | N | Y | N | P | D | N | P | K | E | R | G | F | W
Template Known Secondary structure |  |  |  |  |  |  |  | B |  |  | G | G | G |  |  | T | T |  |  |  |  |  |  |  |  | S | S | S | T | T | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 205 | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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