Phyre 2 alignment of P60340 with d2a2pa1

Return to main results | Retrieve Phyre Job Id

Job Description | P60340
Confidence | 28.41% | Date | Thu Jan 5 12:06:43 GMT 2012
Rank | 48 | Aligned Residues | 38
% Identity | 21% | Template | d2a2pa1
SCOP info | Thioredoxin fold | Thioredoxin-like | Selenoprotein W-related
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . |  | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . |  |  |  |  |  | . | . | . | . | 120 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | D | A | D | G | Q | I | V | E | E | R | P | V | . | T | F | S | A | E | Q | L | A | A | A | L | D | T | F | . | . | . | . | . | R | G | D | I | E | Q | I | P | S | M | Y
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | S | R | N | Y | Q | E | L | E | R | I | P | L | S | Q | M | T | R | D | E | I | N | A | L | V | Q | E | L | G | F | Y | R | K | S | A | P | E | A | Q | V | P | P | E | Y
Template Known Secondary structure |  |  |  | S | S | S |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  | B |  | S | S | T | T |  |  |  |  | G | G | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions