Phyre 2 alignment of P60340 with c1yp3C_

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Job Description | P60340
Confidence | 7.67% | Date | Thu Jan 5 12:06:43 GMT 2012
Rank | 76 | Aligned Residues | 29
% Identity | 24% | Template | c1yp3C_
PDB info | PDB header:transferase | Chain: C: PDB Molecule:glucose-1-phosphate adenylyltransferase small | PDBTitle: crystal structure of potato tuber adp-glucose2 pyrophosphorylase in complex with atp
Resolution | 2.60 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 46 | . | . | . | 50 | . |  |  |  | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | A | L | D | P | L | A | . | . | . | T | G | M | L | P | I | C | L | G | E | A | T | K | F | S | Q | Y | L | L | D | S | D | K
Query Conservation |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | C | L | D | P | D | A | S | R | S | V | L | G | I | I | L | G | G | G | A | G | T | R | L | Y | P | L | T | K | K | R | A | K
Template Known Secondary structure |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |  | T | T | S | T | T | T | T | T | T | S |  | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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