203 c1s3sA_ Probab=98.43   E-value=4.3e-07  Score=67.40  Aligned_columns=224  Identities=19%

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-----------CCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCE
Q ss_conf             222111122333322212233210000000100-----------022333103424898889999999986077469875
Q batch____       129 IRHLHQALSTSWQWGHILTNSPAMMDICKDTAK-----------IALSQASVLISGESGTGKELIARAIHYNSRRAKGPF  197 (461)
Q Consensus       129 ~~~~~~~l~~~~~~~~lig~S~~m~~l~~~i~~-----------~A~~~~pvli~Ge~GtGK~~~A~~ih~~s~~~~~~~  197 (461)
                      .............+.++.|-....+++.+.+..           -...+..+|+.|++||||+++|+++...   ...+|
T Consensus       168 ~~~~~~~~~~~~~~~dIgGl~~~k~~l~~~i~~pl~~~~~~~~~g~~~~~~~Ll~Gp~G~GKt~l~~~ia~~---~~~~~  244 (436)
T c1s3sA_         168 KREDEEESLNEVGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE---TGAFF  244 (436)
T ss_dssp             CCCTTCCCTTSCCGGGCCSCHHHHHHHHHHHHHHHHCTTHHHHCCCCCCCEEEEECSTTSSHHHHHHHHHHH---HTCEE
T ss_pred             CCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH---CCCCE
T ss_conf             432101235678953420549999999999997501889897488998753898679989978999999874---49958


Q ss_pred             ECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHC-----------CHHHHHHHHHHHHCCCE
Q ss_conf             4155311896675565317667888887623268310047987997254778-----------99999999999733956
Q batch____       198 IKVNCAALPESLLESELFGHEKGAFTGAQTLRQGLFERANEGTLLLDEIGEM-----------PLVLQAKLLRILQEREF  266 (461)
Q Consensus       198 v~i~c~~~~~~~~e~~lfg~~~~a~t~~~~~~~g~~~~a~gGtL~l~~i~~L-----------~~~~Q~~L~~~l~~~~~  266 (461)
                      +.++|         +++++...|......+..-.........++||||+|.+           ....-..++..+..   
T Consensus       245 ~~i~~---------~~l~~~~~g~~e~~l~~~f~~a~~~~p~ii~lDeid~l~~~~~~~~~~~~~~~~~~~~~~~~~---  312 (436)
T c1s3sA_         245 FLING---------PEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDG---  312 (436)
T ss_dssp             EEEEH---------HHHHTSCTTHHHHHHHHHHHHHHHTCSEEEEEETGGGTCCCSSSCCCTTHHHHHHHHHHHHHH---
T ss_pred             EEEEH---------HHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC---
T ss_conf             99730---------687001001588889999999975099489840000321025788745889999999864302---


Q ss_pred             EECCCCCCCCCCCEEEECCCCC---HHHHHHCCCCCHHHHHHCCEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             4668888024573042015789---7999884899867886217368860414307364899999999999998267998
Q batch____       267 ERIGGHQTIKVDIRIIAATNRD---LQAMVKEGTFREDLFYRLNVIHLILPPLRDRREDISLLANHFLQKFSSENQRDII  343 (461)
Q Consensus       267 ~~~~~~~~~~~~~rii~~s~~~---l~~~~~~~~f~~~L~~~l~~~~i~iP~LreR~eDi~~l~~~~l~~~~~~~~~~~~  343 (461)
                            ......+-+|++|+.+   ...+.+.|+|.       ..+.+.+|.-.+|.+            +-+.+-+...
T Consensus       313 ------~~~~~~v~vi~tt~~~~~l~~~l~r~~rf~-------~~i~~~~P~~~~R~~------------Il~~~~~~~~  367 (436)
T c1s3sA_         313 ------LKQRAHVIVMAATNRPNSIDPALRRFGRFD-------REVDIGIPDATGRLE------------ILQIHTKNMK  367 (436)
T ss_dssp             ------CCGGGCEEEEEEESCGGGSCGGGTSTTSSC-------EEEECCCCCHHHHHH------------HHHHTTTTSE
T ss_pred             ------CCCCCCEEEEEECCCHHHCCHHHHCCCCCE-------EEEECCCCCHHHHHH------------HHHHHHCCCC
T ss_conf             ------224698799984489588882420424030-------366678989999999------------9999843898


Q ss_pred             CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC--------------------CCCCCCHHHHHHHHHH
Q ss_conf             889899999861898981799999999999865--------------------8981238882066420
Q batch____       344 DIDPMAMSLLTAWSWPGNIRELSNVIERAVVMN--------------------SGPIIFSEDLPPQIRQ  392 (461)
Q Consensus       344 ~~s~~a~~~L~~y~wpgNi~eL~~~i~~~~~~~--------------------~~~~i~~~~l~~~~~~  392 (461)
                      --+.-.+..|....=--.-.+|.+++.+|+..+                    ..-.|+.+|+...+.+
T Consensus       368 l~~d~~~~~la~~t~g~~~~dl~~l~~~a~~~a~~r~~~~~~~~~~~~~~~~~~~~~v~~~df~~al~~  436 (436)
T c1s3sA_         368 LADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ  436 (436)
T ss_dssp             ECTTCCHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHTTTTTCSSCCCBHHHHHHCEECHHHHHHHHCC
T ss_pred             CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHCCCCCHHHHHHHHHC
T ss_conf             988668788998768998899999999999999998886402002103876673010169989988609