112 c1in8A_ Probab=99.71   E-value=5e-15  Score=121.41  Aligned_columns=257  Identities=14%

Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHC---CCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHH
Q ss_conf             3333222122332100000001000---2233310342489888999999998607746987541553118966755653
Q batch____       138 TSWQWGHILTNSPAMMDICKDTAKI---ALSQASVLISGESGTGKELIARAIHYNSRRAKGPFIKVNCAALPESLLESEL  214 (461)
Q Consensus       138 ~~~~~~~lig~S~~m~~l~~~i~~~---A~~~~pvli~Ge~GtGK~~~A~~ih~~s~~~~~~~v~i~c~~~~~~~~e~~l  214 (461)
                      +...+.+++|.....+.+...+...   .....+|+|+|++||||+++|++|+..   .+.+|+.++|............
T Consensus         4 rp~~~~d~iG~e~~~~~L~~~i~~~~~~~~~~~~ill~GppGtGKT~la~~ia~~---l~~~~~~i~~~~~~~~~~~~~~   80 (298)
T c1in8A_           4 RPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASE---LQTNIHVTSGPVLVKQGDMAAI   80 (298)
T ss_dssp             SCSSGGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHH---HTCCEEEEETTTCCSHHHHHHH
T ss_pred             CCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHH---CCCCEEEEECCCCCCCHHHHHH
T ss_conf             8999778127099999999999998633888885799869889888999999997---0997999941553320124566


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEECCCCCHHHHHH
Q ss_conf             17667888887623268310047987997254778999999999997339564668888024573042015789799988
Q batch____       215 FGHEKGAFTGAQTLRQGLFERANEGTLLLDEIGEMPLVLQAKLLRILQEREFERIGGHQTIKVDIRIIAATNRDLQAMVK  294 (461)
Q Consensus       215 fg~~~~a~t~~~~~~~g~~~~a~gGtL~l~~i~~L~~~~Q~~L~~~l~~~~~~~~~~~~~~~~~~rii~~s~~~l~~~~~  294 (461)
                                       .....+++++|+++++.++...|..++..+++         ........+++........+..
T Consensus        81 -----------------~~~~~~~~il~~dei~~l~~~~~~~l~~~l~~---------~~~~~~~~~~~~~~~~~~~~~~  134 (298)
T c1in8A_          81 -----------------LTSLERGDVLFIDEIHRLNKAVEELLYSAIED---------FQIDIQPFTLVGATVRSGLLSS  134 (298)
T ss_dssp             -----------------HHTCCTTCEEEEETGGGCCHHHHHHHHHHHHH---------SCCCCCCCEEEEEESCGGGSCH
T ss_pred             -----------------HHHHCCCCEEEEEEHHHCCHHHHHHHHHHHHC---------CCCCCCEEEECCCCCCHHHCCC
T ss_conf             -----------------88513799899942367698999999999705---------5334440665265458563146


Q ss_pred             CCCCCHHHHHHCCEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf             48998678862173688604143073648999999999999982679988898999998618989817999999999998
Q batch____       295 EGTFREDLFYRLNVIHLILPPLRDRREDISLLANHFLQKFSSENQRDIIDIDPMAMSLLTAWSWPGNIRELSNVIERAVV  374 (461)
Q Consensus       295 ~~~f~~~L~~~l~~~~i~iP~LreR~eDi~~l~~~~l~~~~~~~~~~~~~~s~~a~~~L~~y~wpgNi~eL~~~i~~~~~  374 (461)
                      .     .+......+.+..|+..++..        ++...+.+.+.   .++.++++.+..+ |+||+|++.+++++++.
T Consensus       135 ~-----~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~---~~~~~~~~~i~~~-~~g~~R~~~~ll~~~~~  197 (298)
T c1in8A_         135 P-----LRSRFGIILELDFYTVKELKE--------IIKRAASLMDV---EIEDAAAEMIAKR-SRGTPRIAIRLTKRVRD  197 (298)
T ss_dssp             H-----HHTTCSEEEECCCCCHHHHHH--------HHHHHHHHTTC---CBCHHHHHHHHHT-STTCHHHHHHHHHHHHH
T ss_pred             H-----HHHHHHHHCCCCCCCHHHHHH--------HHHHHHHHCCC---CCCHHHHHHHHHH-CCCCHHHHHHHHHHHHH
T ss_conf             4-----332344311367898999999--------99999998298---5588999999998-39998999999999999


Q ss_pred             HCC---CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC---HHHHHHHHCCCHHHHH
Q ss_conf             658---9812388820664201345555455675668989999999999999999982987---8899988589988999
Q batch____       375 MNS---GPIIFSEDLPPQIRQPVCNAGEVKTAPVGERNLKEEIKRVEKRIIMEVLEQQEGN---RTRTALMLGISRRALM  448 (461)
Q Consensus       375 ~~~---~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~E~~~i~~aL~~~~gn---~~~aA~~LGisR~tL~  448 (461)
                      .+.   ...|+.+++...+..........              .+.+++.+.......+++   ....|+.||++.+++.
T Consensus       198 ~~~~~~~~~i~~~~i~~~~~~~~~~~~~~--------------~~~~~~~~~~l~~~~~~~~~~~~~ia~~l~~~~~~~~  263 (298)
T c1in8A_         198 MLTVVKADRINTDIVLKTMEVLNIDDEGL--------------DEFDRKILKTIIEIYRGGPVGLNALAASLGVEADTLS  263 (298)
T ss_dssp             HHHHHTCSSBCHHHHHHHHHHHTCCTTCC--------------CHHHHHHHHHHHHHSTTCCBCHHHHHHHHTSCHHHHH
T ss_pred             HHHHCCCCCCCHHHHHHHHHHHCCCCHHH--------------HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHH
T ss_conf             99852988769899999997512551011--------------1468999999999817695479999998599989999


Q ss_pred             HHHHHC
Q ss_conf             999981
Q batch____       449 YKLQEY  454 (461)
Q Consensus       449 rklk~~  454 (461)
                      .++..|
T Consensus       264 ~~~~~~  269 (298)
T c1in8A_         264 EVYEPY  269 (298)
T ss_dssp             HTTHHH
T ss_pred             HHHHHH
T ss_conf             997657