BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (308 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0ACR7 Uncharacterized HTH-type transcriptional regulat... 625 e-178 UniRef50_Q475G5 Regulatory protein, LysR:LysR, substrate-binding... 302 9e-81 UniRef50_Q0KE24 Transcriptional regulator, LysR-family n=2 Tax=C... 293 7e-78 UniRef50_C6C982 Transcriptional regulator, LysR family n=1 Tax=D... 276 8e-73 UniRef50_D0J169 Transcriptional regulator, LysR family n=12 Tax=... 241 3e-62 UniRef50_Q46S80 Transcriptional regulator, LysR family n=4 Tax=C... 217 4e-55 UniRef50_A8IAC4 Transcriptional regulator n=1 Tax=Azorhizobium c... 180 5e-44 UniRef50_B2JRE2 Transcriptional regulator, LysR family n=7 Tax=B... 180 7e-44 UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Prote... 177 4e-43 UniRef50_UPI00004DBCAD UPI00004DBCAD related cluster n=2 Tax=Xen... 171 2e-41 UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=ma... 166 1e-39 UniRef50_P52696 Uncharacterized HTH-type transcriptional regulat... 163 8e-39 UniRef50_Q46SX0 Transcriptional regulator, LysR family n=4 Tax=B... 160 4e-38 UniRef50_Q0K6D4 Transcriptional regulator, LysR-family n=2 Tax=C... 159 9e-38 UniRef50_Q46WQ0 Transcriptional regulator, LysR family n=1 Tax=R... 159 1e-37 UniRef50_A6SXB4 Transcriptional regulator, LysR family n=1 Tax=J... 157 5e-37 UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=R... 156 9e-37 UniRef50_Q46PT5 Transcriptional regulator, LysR family n=1 Tax=R... 153 8e-36 UniRef50_B1Z4Z1 Transcriptional regulator, LysR family n=5 Tax=P... 150 5e-35 UniRef50_B0T3V7 Transcriptional regulator, LysR family n=1 Tax=C... 150 5e-35 UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=C... 150 8e-35 UniRef50_A8HRF7 Transcriptional regulator n=1 Tax=Azorhizobium c... 148 2e-34 UniRef50_B7RV59 LysR substrate binding domain protein n=1 Tax=ma... 148 2e-34 UniRef50_C8T378 LysR family transcriptional regulator n=1 Tax=Kl... 148 3e-34 UniRef50_Q46Q42 Regulatory protein, LysR:LysR, substrate-binding... 146 1e-33 UniRef50_B7X3R9 Transcriptional regulator, LysR family n=1 Tax=C... 145 1e-33 UniRef50_B1M1C3 Transcriptional regulator, LysR family n=1 Tax=M... 145 2e-33 UniRef50_A9AT14 LysR family transcriptional regulator n=11 Tax=B... 144 3e-33 UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax... 142 1e-32 UniRef50_A6UGP0 Transcriptional regulator, LysR family n=2 Tax=S... 141 3e-32 UniRef50_Q7WCW0 Probable LysR-family transcriptional regulator n... 139 2e-31 UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=... 137 4e-31 UniRef50_A6T102 Transcriptional regulator, LysR family n=1 Tax=J... 137 5e-31 UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=C... 137 6e-31 UniRef50_A8II36 Putative transcriptional regulator n=1 Tax=Azorh... 136 9e-31 UniRef50_C6P9X7 Transcriptional regulator, LysR family n=1 Tax=T... 136 1e-30 UniRef50_Q12EW2 Transcriptional regulator, LysR family n=1 Tax=P... 135 1e-30 UniRef50_UPI0001AEC4E8 probable transcriptional regulator n=1 Ta... 135 2e-30 UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=g... 134 3e-30 UniRef50_Q1YQB9 Transcriptional regulator, LysR family protein n... 134 5e-30 UniRef50_C0ZAD7 Transcriptional regulator n=1 Tax=Brevibacillus ... 134 5e-30 UniRef50_B2JVU4 Transcriptional regulator, LysR family n=43 Tax=... 132 1e-29 UniRef50_A3JD31 Transcriptional regulator, LysR family protein n... 132 1e-29 UniRef50_D2D3B5 FumC n=1 Tax=Sphingopyxis macrogoltabida RepID=D... 132 2e-29 UniRef50_A3VL76 Putative LysR-family transcriptional regulator n... 131 3e-29 UniRef50_A1W6X9 Transcriptional regulator, LysR family n=19 Tax=... 130 4e-29 UniRef50_B7RS92 Regulatory protein, LysR:LysR, substrate-binding... 130 7e-29 UniRef50_B9KUK0 Transcriptional regulator n=2 Tax=Rhodobacterace... 130 8e-29 UniRef50_B4RYM7 Probable transcriptional regulator n=1 Tax=Alter... 129 1e-28 UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=C... 129 2e-28 UniRef50_Q7WC66 LysR-family transcriptional regulator n=3 Tax=Bo... 128 3e-28 UniRef50_B4DCH5 Transcriptional regulator, LysR family n=1 Tax=C... 127 4e-28 UniRef50_C5CQD2 Transcriptional regulator, LysR family n=1 Tax=V... 127 5e-28 UniRef50_Q2BJH5 LysR-family transcriptional regulator n=1 Tax=Ne... 126 9e-28 UniRef50_A9ISQ5 Transcriptional regulator, LysR-family n=1 Tax=B... 126 1e-27 UniRef50_D0Z9H4 Transcriptional regulator, LysR family n=40 Tax=... 126 1e-27 UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=... 125 1e-27 UniRef50_B1M0B1 Transcriptional regulator, LysR family n=24 Tax=... 124 3e-27 UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=M... 124 5e-27 UniRef50_C1DSG7 Transcriptional regulator, LysR family n=1 Tax=A... 123 7e-27 UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=A... 123 7e-27 UniRef50_B4EJC5 LysR family regulatory protein n=16 Tax=Betaprot... 123 7e-27 UniRef50_A5V780 Transcriptional regulator, LysR family n=1 Tax=S... 123 7e-27 UniRef50_A8FJ94 Possible LysR family transcriptional regulator n... 123 9e-27 UniRef50_Q46U73 Regulatory protein, LysR:LysR, substrate-binding... 123 1e-26 UniRef50_P37499 Uncharacterized HTH-type transcriptional regulat... 122 1e-26 UniRef50_A0L4T1 Transcriptional regulator, LysR family n=2 Tax=P... 122 1e-26 UniRef50_Q1LFI3 Transcriptional regulator, LysR family n=1 Tax=C... 122 2e-26 UniRef50_B8D275 Transcriptional regulator, LysR family n=11 Tax=... 122 2e-26 UniRef50_Q13FG1 Transcriptional regulator, LysR family n=1 Tax=B... 122 2e-26 UniRef50_Q47V29 Substrate-binding transcriptional regulator, Lys... 121 4e-26 UniRef50_Q39JP1 Transcriptional regulator, LysR family n=11 Tax=... 120 4e-26 UniRef50_Q46S95 Transcriptional regulator, LysR family n=2 Tax=B... 120 5e-26 UniRef50_B6A2Y2 Transcriptional regulator, LysR family n=11 Tax=... 120 5e-26 UniRef50_Q13GE5 Transcriptional regulator, LysR family n=1 Tax=B... 120 6e-26 UniRef50_A4J1K6 Transcriptional regulator, LysR family n=1 Tax=D... 120 7e-26 UniRef50_D0J2M8 Transcriptional regulator, LysR family n=2 Tax=C... 119 1e-25 UniRef50_Q1YUD1 Probable transcriptional regulator n=1 Tax=gamma... 119 1e-25 UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=D... 119 2e-25 UniRef50_C2UXN9 LysR family transcriptional regulator n=1 Tax=Ba... 119 2e-25 UniRef50_C5CZL1 Transcriptional regulator, LysR family n=1 Tax=V... 119 2e-25 UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Ta... 119 2e-25 UniRef50_B4WIK9 LysR substrate binding domain protein n=1 Tax=Sy... 119 2e-25 UniRef50_Q127N6 Transcriptional regulator, LysR family n=1 Tax=P... 119 2e-25 UniRef50_UPI0001C36FDC transcriptional regulator, LysR family pr... 118 3e-25 UniRef50_A5WE98 Transcriptional regulator, LysR family n=2 Tax=P... 118 3e-25 UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=... 117 3e-25 UniRef50_Q01RY1 Transcriptional regulator, LysR family n=1 Tax=C... 117 4e-25 UniRef50_C1SP16 Transcriptional regulator, COG0583 n=1 Tax=Denit... 117 4e-25 UniRef50_B1KU62 Transcriptional regulator, LysR family n=10 Tax=... 117 4e-25 UniRef50_Q1V682 Putative transcriptional regulator protein n=1 T... 117 6e-25 UniRef50_B6FPK4 Putative uncharacterized protein n=1 Tax=Clostri... 117 6e-25 UniRef50_B2I0F8 Transcriptional regulator n=13 Tax=Acinetobacter... 117 7e-25 UniRef50_Q0TQC8 Transcriptional regulator, LysR family n=10 Tax=... 116 8e-25 UniRef50_C9PJ12 Putative transcriptional regulator protein n=1 T... 116 8e-25 UniRef50_A6SW66 Transcriptional regulator, LysR family n=1 Tax=J... 116 9e-25 UniRef50_A8SN43 Putative uncharacterized protein n=1 Tax=Parvimo... 116 1e-24 UniRef50_Q13R34 Transcriptional regulator, LysR family n=2 Tax=B... 116 1e-24 UniRef50_B9QYV9 LysR substrate binding domain protein n=1 Tax=La... 116 1e-24 UniRef50_A5MZU7 Predicted transcriptional regulator n=3 Tax=Clos... 116 1e-24 UniRef50_D1BNW2 Transcriptional regulator, LysR family n=4 Tax=V... 116 1e-24 UniRef50_Q97DV9 Transcriptional regulator, LysR family n=1 Tax=C... 115 1e-24 UniRef50_Q2KXT5 LysR-family transcriptional regulator n=4 Tax=Bo... 115 1e-24 UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=A... 115 1e-24 UniRef50_C6DBU7 Transcriptional regulator, LysR family n=4 Tax=P... 115 2e-24 UniRef50_Q15VE5 Transcriptional regulator, LysR family n=1 Tax=P... 115 2e-24 UniRef50_P39592 Uncharacterized HTH-type transcriptional regulat... 115 3e-24 UniRef50_A3IAK3 Transcriptional regulators, LysR family protein ... 114 3e-24 UniRef50_C9YVN6 Probable LysR-family transcriptional regulator n... 114 3e-24 UniRef50_Q12FR1 Transcriptional regulator, LysR family n=1 Tax=P... 114 4e-24 UniRef50_A7GJI5 Transcriptional regulator, LysR family n=11 Tax=... 114 4e-24 UniRef50_A6DK62 Hydrogen peroxide-inducible genes activator n=1 ... 114 5e-24 UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=B... 114 5e-24 UniRef50_A6WDF3 Transcriptional regulator, LysR family n=1 Tax=K... 114 5e-24 UniRef50_C3BJ72 YwqM (Probable transcriptional regulator YwqM) n... 114 5e-24 UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae R... 114 6e-24 UniRef50_A6X7A0 Transcriptional regulator, LysR family n=1 Tax=O... 114 6e-24 UniRef50_B4ETA7 LysR-family transciptional regulator n=37 Tax=En... 113 8e-24 UniRef50_C0EFB5 Putative uncharacterized protein n=1 Tax=Clostri... 113 8e-24 UniRef50_B9TDR3 HTH-type transcriptional regulator xapR, putativ... 113 1e-23 UniRef50_C4V4C8 Transcriptional regulator n=2 Tax=Selenomonas Re... 113 1e-23 UniRef50_Q2SD63 Transcriptional regulator n=2 Tax=Oceanospirilla... 112 1e-23 UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Ba... 112 1e-23 UniRef50_C7MU92 Transcriptional regulator n=1 Tax=Saccharomonosp... 112 1e-23 UniRef50_Q2J000 Transcriptional regulator, LysR family n=1 Tax=R... 112 1e-23 UniRef50_C0BJQ2 Transcriptional regulator, LysR family n=1 Tax=F... 112 2e-23 UniRef50_A9I810 Transcriptional regulator, LysR-family n=5 Tax=P... 112 2e-23 UniRef50_Q4ZT12 Regulatory protein, LysR:LysR, substrate-binding... 112 2e-23 UniRef50_C0CUF5 Putative uncharacterized protein n=1 Tax=Clostri... 112 2e-23 UniRef50_A9I9S7 Transcriptional regulator, LysR-family n=1 Tax=B... 111 3e-23 UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepI... 111 3e-23 UniRef50_Q31FC6 Transcriptional regulator, LysR family n=7 Tax=P... 111 3e-23 UniRef50_A6F002 Transcriptional regulator, LysR family protein n... 111 3e-23 UniRef50_Q0A4N3 Transcriptional regulator, LysR family n=3 Tax=E... 111 4e-23 UniRef50_C8W2B6 Transcriptional regulator, LysR family n=1 Tax=D... 111 4e-23 UniRef50_A6VX33 Transcriptional regulator, LysR family n=2 Tax=M... 111 4e-23 UniRef50_B1I114 Transcriptional regulator, LysR family n=1 Tax=C... 110 4e-23 UniRef50_Q0B7J0 Transcriptional regulator, LysR family n=1 Tax=B... 110 4e-23 UniRef50_Q6ANM2 Related to transcriptional regulator n=3 Tax=Des... 110 5e-23 UniRef50_B5KEU1 Transcriptional regulator, LysR family, putative... 110 5e-23 UniRef50_A6X5N5 Transcriptional regulator, LysR family n=37 Tax=... 110 5e-23 UniRef50_D0DE20 Transcriptional Regulator, LysR family n=1 Tax=C... 110 5e-23 UniRef50_B2A0Q8 Transcriptional regulator, LysR family n=1 Tax=N... 110 5e-23 UniRef50_C0ZI27 Transcriptional regulator n=1 Tax=Brevibacillus ... 110 6e-23 UniRef50_A1WRQ7 Transcriptional regulator, LysR family n=2 Tax=B... 110 9e-23 UniRef50_C9KJX6 Transcriptional regulator, LysR family n=2 Tax=V... 110 9e-23 UniRef50_C6D0V7 Transcriptional regulator, LysR family n=4 Tax=B... 109 1e-22 UniRef50_C5BQI4 Transcriptional regulator, LysR family n=1 Tax=T... 109 1e-22 UniRef50_Q7W708 Putative LysR-family transcriptional regulator n... 109 1e-22 UniRef50_A4FHZ4 Transcriptional regulator, LysR family n=2 Tax=A... 109 1e-22 UniRef50_C3DB38 Transcription regulator LysR family VC1617 n=7 T... 109 1e-22 UniRef50_D1PCH2 Transcriptional regulator, LysR family n=10 Tax=... 109 1e-22 UniRef50_Q3A466 Transcriptional regulator, LysR family n=6 Tax=D... 109 1e-22 UniRef50_Q21B31 Transcriptional regulator, LysR family n=2 Tax=A... 109 1e-22 UniRef50_A7ZAT2 Putative HTH-type transcriptional regulator n=2 ... 109 1e-22 UniRef50_C7RSN5 Transcriptional regulator, LysR family n=1 Tax=C... 109 2e-22 UniRef50_Q97GH3 Transcriptional regulator, LysR family n=2 Tax=C... 108 2e-22 UniRef50_B1ZJS2 Transcriptional regulator, LysR family n=8 Tax=A... 108 2e-22 UniRef50_Q0BXT0 Putative oxidative stress regulatory protein Oxy... 108 2e-22 UniRef50_C3X7G6 Transcriptional regulator n=2 Tax=Oxalobacter fo... 108 2e-22 UniRef50_B0UQK5 Transcriptional regulator, LysR family n=2 Tax=M... 108 2e-22 UniRef50_Q13R07 Transcriptional regulator, LysR family n=1 Tax=B... 108 2e-22 UniRef50_B8FZV1 Transcriptional regulator, LysR family n=2 Tax=D... 108 2e-22 UniRef50_A1BA89 Transcriptional regulator, LysR family n=4 Tax=A... 108 2e-22 UniRef50_D0KYG7 Transcriptional regulator, LysR family n=3 Tax=G... 108 3e-22 UniRef50_B5YJV7 Transcriptional regulator n=1 Tax=Thermodesulfov... 108 3e-22 UniRef50_C0F0J2 Putative uncharacterized protein n=1 Tax=Eubacte... 108 3e-22 UniRef50_B4CXF3 Transcriptional regulator, LysR family n=1 Tax=C... 108 3e-22 UniRef50_B0V4K3 HTH-type transcriptional regulator n=13 Tax=Acin... 107 4e-22 UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=G... 107 4e-22 UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Ac... 107 5e-22 UniRef50_Q1IHL3 Transcriptional regulator, LysR family n=1 Tax=C... 107 5e-22 UniRef50_Q7URH5 Probable transcription regulator n=1 Tax=Rhodopi... 107 5e-22 UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=P... 107 5e-22 UniRef50_UPI000178A8A2 transcriptional regulator, LysR family n=... 107 6e-22 UniRef50_B8FI63 Transcriptional regulator, LysR family n=1 Tax=D... 107 6e-22 UniRef50_A5EJ00 Transcriptional regulator, LysR family n=2 Tax=B... 107 6e-22 UniRef50_Q65GU9 Transcriptional regulator YbbE n=2 Tax=Bacillus ... 107 6e-22 UniRef50_Q67PU0 LysR family transcriptional regulator n=1 Tax=Sy... 107 7e-22 UniRef50_D2R7I4 Transcriptional regulator, LysR family n=6 Tax=P... 107 7e-22 UniRef50_C8VWS6 Transcriptional regulator, LysR family n=1 Tax=D... 107 7e-22 UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=M... 107 8e-22 UniRef50_A0KPQ5 Transcriptional regulator n=1 Tax=Aeromonas hydr... 106 8e-22 UniRef50_C7RPQ0 Transcriptional regulator, LysR family n=1 Tax=C... 106 8e-22 UniRef50_C1M4D9 Putative uncharacterized protein n=2 Tax=Citroba... 106 9e-22 UniRef50_B2TBU4 Transcriptional regulator, LysR family n=12 Tax=... 106 9e-22 UniRef50_B0A6J5 Putative uncharacterized protein n=1 Tax=Clostri... 106 1e-21 UniRef50_A8RPQ8 Putative uncharacterized protein n=2 Tax=Clostri... 106 1e-21 UniRef50_A5WHD9 Transcriptional regulator, LysR family n=4 Tax=G... 106 1e-21 UniRef50_D2QVQ4 Transcriptional regulator, LysR family n=22 Tax=... 106 1e-21 UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=P... 106 1e-21 UniRef50_Q48IW5 Transcriptional regulator, LysR family n=8 Tax=P... 106 1e-21 UniRef50_B4UJ91 Transcriptional regulator, LysR family n=3 Tax=A... 106 1e-21 UniRef50_B5XVV4 Transcriptional regulator cynR n=5 Tax=Enterobac... 106 1e-21 UniRef50_Q4KHB2 Transcriptional regulator, LysR family n=28 Tax=... 106 1e-21 UniRef50_B6R6F6 Transcriptional regulator, LysR family n=1 Tax=P... 105 1e-21 UniRef50_A0Y7Z6 Probable transcriptional regulator n=1 Tax=marin... 105 1e-21 UniRef50_Q1GX89 Transcriptional regulator, LysR family n=13 Tax=... 105 2e-21 UniRef50_A9F7Y4 Transcriptional regulator, LysR family n=1 Tax=S... 105 2e-21 UniRef50_C5ALH3 Transcriptional regulator, LysR family protein n... 105 2e-21 UniRef50_P0ACQ6 Hydrogen peroxide-inducible genes activator n=27... 105 2e-21 UniRef50_B6FW03 Putative uncharacterized protein n=1 Tax=Clostri... 105 2e-21 UniRef50_Q47XE5 Transcriptional regulator, LysR family n=6 Tax=G... 105 2e-21 UniRef50_D1P4N6 Transcriptional regulator, LysR family n=3 Tax=P... 105 2e-21 UniRef50_A1WKV9 Transcriptional regulator, LysR family n=2 Tax=C... 105 2e-21 UniRef50_A1TYB8 Transcriptional regulator, LysR family n=39 Tax=... 105 2e-21 UniRef50_A9C220 Transcriptional regulator, LysR family n=1 Tax=D... 105 2e-21 UniRef50_A4SYM5 Transcriptional regulator n=1 Tax=Polynucleobact... 105 2e-21 UniRef50_B7X0F3 Transcriptional regulator, LysR family n=1 Tax=C... 105 2e-21 UniRef50_C6CDP6 Transcriptional regulator, LysR family n=7 Tax=E... 105 3e-21 UniRef50_A5W7U4 Transcriptional regulator, LysR family n=17 Tax=... 105 3e-21 UniRef50_A3ZZ39 Probable transcription regulator n=1 Tax=Blastop... 105 3e-21 UniRef50_Q7W9G9 Probable LysR-family transcriptional regulator n... 105 3e-21 UniRef50_C0ZFW3 Transcriptional regulator n=1 Tax=Brevibacillus ... 105 3e-21 UniRef50_D2R1A9 Transcriptional regulator, LysR family n=1 Tax=P... 104 3e-21 UniRef50_A7IF06 Transcriptional regulator, LysR family n=5 Tax=A... 104 3e-21 UniRef50_B2HU56 Transcriptional regulator n=17 Tax=Acinetobacter... 104 4e-21 UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=... 104 4e-21 UniRef50_A6VV39 Transcriptional regulator, LysR family n=6 Tax=G... 104 4e-21 UniRef50_P77559 Uncharacterized HTH-type transcriptional regulat... 104 4e-21 UniRef50_B7RU53 LysR substrate binding domain protein n=2 Tax=un... 104 4e-21 UniRef50_D0S1T8 Transcriptional regulator n=1 Tax=Acinetobacter ... 104 4e-21 UniRef50_B8FPA0 Transcriptional regulator, LysR family n=4 Tax=C... 104 5e-21 UniRef50_Q84IM0 Transcriptional regulator LysR family protein n=... 104 5e-21 UniRef50_A1K6J7 LysR-family transcriptional regulator n=5 Tax=Pr... 104 5e-21 UniRef50_D0J7Q2 Transcriptional regulator, LysR family n=2 Tax=C... 104 5e-21 UniRef50_A6VUM5 Transcriptional regulator, LysR family n=2 Tax=G... 103 5e-21 UniRef50_Q4ZQQ6 Regulatory protein, LysR:LysR, substrate-binding... 103 5e-21 UniRef50_A4J4H0 Transcriptional regulator n=1 Tax=Desulfotomacul... 103 6e-21 UniRef50_A4JPZ1 Transcriptional regulator, LysR family n=2 Tax=P... 103 6e-21 UniRef50_A6TLX8 Transcriptional regulator, LysR family n=3 Tax=A... 103 6e-21 UniRef50_C1TNQ4 Transcriptional regulator, COG0583 n=1 Tax=Dethi... 103 6e-21 UniRef50_C7GB30 Transcriptional regulator n=1 Tax=Roseburia inte... 103 6e-21 UniRef50_B8IEH6 Transcriptional regulator, LysR family n=1 Tax=M... 103 7e-21 UniRef50_B1J4U2 Transcriptional regulator, LysR family n=2 Tax=P... 103 7e-21 UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepI... 103 7e-21 UniRef50_C5BDD2 HTH-type transcriptional regulator AlsR n=2 Tax=... 103 8e-21 UniRef50_P52667 HTH-type transcriptional regulator estR n=17 Tax... 103 9e-21 UniRef50_A3K7Z5 Regulatory protein, LysR:LysR, substrate-binding... 103 9e-21 UniRef50_B8G0Z2 Transcriptional regulator, LysR family n=4 Tax=F... 103 9e-21 UniRef50_Q12AP3 Transcriptional regulator, LysR family n=4 Tax=B... 102 1e-20 UniRef50_A8GI93 Transcriptional regulator, LysR family n=3 Tax=E... 102 1e-20 UniRef50_Q2SFE9 Transcriptional regulator n=1 Tax=Hahella chejue... 102 1e-20 UniRef50_Q7W1I2 Putative LysR-family transcriptional regulator n... 102 1e-20 UniRef50_C7RAV2 Transcriptional regulator, LysR family n=1 Tax=K... 102 1e-20 UniRef50_A8GAT1 Transcriptional regulator, LysR family n=2 Tax=E... 102 1e-20 UniRef50_B9R4T6 LysR substrate binding domain, putative n=1 Tax=... 102 2e-20 UniRef50_A3VLP1 LysR family transcriptional regulatory protein n... 102 2e-20 UniRef50_B4WH17 LysR substrate binding domain protein n=1 Tax=Sy... 102 2e-20 UniRef50_A0RKW5 Transcriptional regulator, LysR family n=81 Tax=... 102 2e-20 >UniRef50_P0ACR7 Uncharacterized HTH-type transcriptional regulator yfeR n=158 Tax=Proteobacteria RepID=YFER_ECOLI Length = 308 Score = 625 bits (1612), Expect = e-178, Method: Compositional matrix adjust. Identities = 308/308 (100%), Positives = 308/308 (100%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT Sbjct: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP Sbjct: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE Sbjct: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS Sbjct: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR Sbjct: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 Query: 301 EGDPLYQI 308 EGDPLYQI Sbjct: 301 EGDPLYQI 308 >UniRef50_Q475G5 Regulatory protein, LysR:LysR, substrate-binding n=9 Tax=Betaproteobacteria RepID=Q475G5_RALEJ Length = 304 Score = 302 bits (774), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 153/291 (52%), Positives = 204/291 (70%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MNY+L+QL+VF+ VA+ FSRA + +GL+QSA+S V ELE GVRLLDRTTREVVLT Sbjct: 1 MNYTLRQLRVFLAVAETGGFSRAADAVGLTQSAISRGVAELEESLGVRLLDRTTREVVLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AGQ LA LERLL +L+ TL DT +G+ G+V +A + TISA L+P +A +YP Sbjct: 61 HAGQALAPALERLLGQLDDTLEDTRELGEHYRGRVVIAGAPTISARLMPMYVAACAAQYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +I+ + D Q +E +R G VDFG++IDP L E ++++PF +C RD LA E Sbjct: 121 EIRLTVRDNVQADGIEQVRAGGVDFGVLIDPLVHDGLTIEPLVTDPFCFVCRRDHPLAQE 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 VPW AL G +LVL D+ASGSRPLID R+GI +VQE+GH A++F MV AGIG S Sbjct: 181 KTVPWSALDGMRLVLLDFASGSRPLIDRVFGRHGIVPRVVQELGHSASVFGMVEAGIGAS 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 +LP +LPLP SPLV + + P ER++++VRR++RSLS AAEA+W +VR+ Sbjct: 241 VLPTYSLPLPAASPLVWRPLVPREERRIVMVRREDRSLSPAAEAVWALVRN 291 >UniRef50_Q0KE24 Transcriptional regulator, LysR-family n=2 Tax=Cupriavidus RepID=Q0KE24_RALEH Length = 305 Score = 293 bits (749), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 149/290 (51%), Positives = 201/290 (69%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MNY+L+QL+VF+ VA FSRA + +GL+Q AVS V ELE GVRLLDRTTREVVLT Sbjct: 1 MNYTLRQLRVFLAVANTGGFSRAADVVGLTQPAVSRGVAELEEALGVRLLDRTTREVVLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG LA LERLL +L+ TL +T ++G++ G+V +A + TISA L+P +A +YP Sbjct: 61 EAGHALAPALERLLGQLDDTLEETRQLGERYRGRVVIAGAPTISARLMPLYVAACAAQYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +I+ + D Q +E +R G VDFG++IDP L E + ++PF +C RD LA Sbjct: 121 EIRLTVRDNVQADGLEQVRAGAVDFGVLIDPLVRDGLVVEPVATDPFCFVCRRDHPLAQS 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 VPW AL G +LVL D+ASGSRPLID R+G+ +VQE+GH A++F MV AGIG S Sbjct: 181 PSVPWAALHGMQLVLLDFASGSRPLIDRVFGRHGVVPLVVQELGHSASVFGMVEAGIGAS 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 +LP+ +LPLP SPLV + + P ER +++VRR++RSLS AA A+WD+VR Sbjct: 241 VLPSFSLPLPAASPLVWRPLVPCEERSIVMVRREDRSLSPAAAAVWDLVR 290 >UniRef50_C6C982 Transcriptional regulator, LysR family n=1 Tax=Dickeya dadantii Ech703 RepID=C6C982_DICDC Length = 298 Score = 276 bits (705), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 135/289 (46%), Positives = 196/289 (67%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N SL+QL++F+ VA+ FSRAG + L+QSA+SHS+ +LEN G+RL +RTTREV+LT Sbjct: 5 NISLRQLRIFLAVAEHHGFSRAGNMMSLTQSAMSHSIGDLENELGIRLFERTTREVLLTQ 64 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 G +L+ L R+L EL +TL +T ++ G V VA S TISA ++P CIA+ YP Sbjct: 65 EGAELSEALRRVLGELETTLCNTQSRAERRRGLVHVATSPTISAGIMPDCIAQIAENYPQ 124 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + ++HDR QQ M+ + G+VDFG++I+P DL E + EPF L+ + +A Sbjct: 125 VNLIIHDRVQQQAMQMVLNGEVDFGVIIEPSVPSDLYTETFMEEPFCLVLPENHQIARLK 184 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V W LQ ++VL DYASGSRPLID AL R+G+ +++QE+GH T+F ++ +GIG+S+ Sbjct: 185 QVTWHDLQNQEMVLLDYASGSRPLIDNALIRHGVTPHVIQELGHVTTIFRILQSGIGVSV 244 Query: 242 LPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 +P LAL E S L V+++ P+ R+L LVRR+N SLSTAA A+W +++ Sbjct: 245 IPQLALSSLECSGLAVRQLWPIENRRLQLVRRRNHSLSTAATAIWTLIQ 293 >UniRef50_D0J169 Transcriptional regulator, LysR family n=12 Tax=cellular organisms RepID=D0J169_COMTE Length = 310 Score = 241 bits (614), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 139/308 (45%), Positives = 199/308 (64%), Gaps = 11/308 (3%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN SL+QL+ FV VAQ SFSRA + + L+Q AVS +V +LE G+ LL RTTREV LT Sbjct: 1 MNISLRQLRAFVAVAQSSSFSRAADALALTQPAVSRNVTDLEQALGLLLLHRTTREVELT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+ L L R+L++L++ L + + Q G+V+VA+S T+SA+L+PQCIA ++ P Sbjct: 61 EAGRLLLGNLSRVLEDLDACLLEVQGLATQRKGRVKVASSPTLSANLLPQCIARGRQQSP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + L DR Q V+ S+R G+VDFG+VIDP DL + IL+EPF L+C +LA + Sbjct: 121 GVNIQLLDRIQSDVLLSVRSGEVDFGVVIDPSEKQDLHAQTILTEPFCLVCLSSHSLARK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V W+ L G LVL D+ASGSR LIDAAL +G A++VQE+GH AT++ MV G+G+S Sbjct: 181 KEVHWEQLAGESLVLLDHASGSRRLIDAALQAHGAAASVVQEVGHTATIYSMVQQGLGLS 240 Query: 241 ILPALALP-----------LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 ++P LA+P + LV + + P V+R +MLV+R+ R LS A +WD++ Sbjct: 241 VVPRLAIPSAWAAQTATTAAAGSAALVSRPLVPKVQRSIMLVKRQQRELSPVAHLVWDLI 300 Query: 290 RDQGNALM 297 + L+ Sbjct: 301 AAEAVGLL 308 >UniRef50_Q46S80 Transcriptional regulator, LysR family n=4 Tax=Cupriavidus RepID=Q46S80_RALEJ Length = 310 Score = 217 bits (552), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 118/290 (40%), Positives = 173/290 (59%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN SL QLK F VA+ KSF+RA +GL+QSAVS SV+ELE RL DRTTR+V LT Sbjct: 1 MNISLPQLKAFAAVARHKSFTRAAAELGLTQSAVSRSVRELEEEIDQRLFDRTTRQVELT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 DAGQ L+ R+ L++E+ TLR++ + G V++A +S+ +P +A + +P Sbjct: 61 DAGQHLSQRICHLIEEVEQTLRESQGAARPSQGMVQIATDPVLSSMSVPAWLAGCRKAWP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I L DR Q+ V++S+R G+VDFGI DP DL CE + +P+ + LA Sbjct: 121 AIAIHLKDRSQESVLQSVRSGEVDFGIATDPQSSDDLYCEPLCVDPYHAVLPAQHPLASR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 D + W L A + D G +P+++ AL+ + ++A +Q +GH A +F MVA G+GI Sbjct: 181 DAIAWGDLSNANVFTLDQQCGVQPVVEKALSHHHVRAGSLQLLGHFAAVFGMVALGLGIG 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 ++P+ A V++ + P V +MLVRRK+RSL A A+WD +R Sbjct: 241 VVPSRAQAGGLHPAAVMRPLRPQVTSTVMLVRRKSRSLKPNAAAIWDALR 290 >UniRef50_A8IAC4 Transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IAC4_AZOC5 Length = 313 Score = 180 bits (457), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 105/286 (36%), Positives = 163/286 (56%), Gaps = 4/286 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+ FV VAQ SFSRA +GLSQSA+S +V++LE GVRLLDRTTR V L+ Sbjct: 3 MNMNLRQLRAFVAVAQTGSFSRAARLLGLSQSALSQAVQQLEADLGVRLLDRTTRSVQLS 62 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G++ ++R+L +L+ L+D + + G V V +++ L+PQ +A+ +P Sbjct: 63 AIGREFLPGVQRVLADLDHQLQDLRDLKEHRRGHVTVTCVPSVALRLLPQVLAQFQEAHP 122 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + + + P+ ++ ++R GD + G+ PG DL +L++ F L+ RD LA Sbjct: 123 MVSVAVREAPRHQIITALRSGDAELGVANVPGDDPDLDSTFLLTDSFALVMRRDHPLAAH 182 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + V W+ A L+ +G R ++ L + + E HPATL MV AG+G++ Sbjct: 183 ESVTWEEAGQAGLIAMAPGTGIRLEMERGLPAPAVPHH---EAEHPATLLAMVEAGVGVA 239 Query: 241 ILPALALPLPEGSPLVVKR-ITPVVERQLMLVRRKNRSLSTAAEAL 285 LP LA P P+ + L + + P VERQL L++R R L+ A AL Sbjct: 240 PLPGLAWPRPDHAGLTFRPLVEPRVERQLFLIKRAGRDLTPAGRAL 285 >UniRef50_B2JRE2 Transcriptional regulator, LysR family n=7 Tax=Burkholderia RepID=B2JRE2_BURP8 Length = 340 Score = 180 bits (456), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 116/307 (37%), Positives = 170/307 (55%), Gaps = 14/307 (4%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN SL+QLKVFV VA+++SF+RA L+QSAVS V+ELE +RL DRTTR+V LT Sbjct: 1 MNVSLQQLKVFVAVARQRSFTRAAREFDLTQSAVSRCVRELEEAIALRLFDRTTRQVELT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG +L R+ RL++E+ TLR+ ++ +G V VA S+ +P+ +A S +P Sbjct: 61 TAGSRLERRIARLIEEIELTLREERAAHEEHTGLVVVACDPVTSSGWLPERLARSAAHFP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVG--DLQCEAILSEPFFLLCHRDSALA 178 D+ ++PQ V+ +I QG+VDFG++ D G + ++S P + LA Sbjct: 121 DLIVTAKEQPQHAVLAAIEQGEVDFGVLCDANVAGADAFHMQPLVSTPLCAVLPHAHPLA 180 Query: 179 VEDYVPWQALQGAKLVLQ----DYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVA 234 + W+AL+ ++ V Q + +G+R + + AL R+ I A E GH A M+ Sbjct: 181 SGAALHWEALRNSRTVTQLVTLNAEAGTRNVTERALNRHRIDAARANECGHLAAALRMIE 240 Query: 235 AGIGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 G+GI +LP + LV + P V MLVRR+NRSL AEA+W Sbjct: 241 LGLGIGVLPVDPHAAALPAALVALPLVPEVSVTTMLVRRRNRSLRPNAEAVW-------- 292 Query: 295 ALMAGRE 301 +L AGRE Sbjct: 293 SLFAGRE 299 >UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Proteobacteria RepID=B9JIM7_AGRRK Length = 306 Score = 177 bits (449), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 104/291 (35%), Positives = 164/291 (56%), Gaps = 3/291 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +N + L+ F V + +SF RA E + +SQ A++ +++LE G LLDRTTR V T Sbjct: 3 INCEILDLRAFQAVVELESFHRAAEALHISQPALTRRIQKLEQSIGAPLLDRTTRHVAPT 62 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 GQ++ + R+L+E + +L G Q G + +A T + + +P I R YP Sbjct: 63 ATGQEMIPLVRRMLEEFDGSLFAIKDSGSQRRGLITMACVPTAAFYFLPTVIRTFGRDYP 122 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ + D ++++ +G+V+FGI + DL E ++ +PF L +D LA Sbjct: 123 HIRLRIRDLTANEGLQAVARGEVEFGINLMGNSDPDLSFEPLIDDPFVLAMRKDHPLAAF 182 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 D + W L+G LV+ D +SG+R L+DAALAR ++ N E+ H T +V AG+GIS Sbjct: 183 DEIHWNQLEGHPLVVVDRSSGNRTLLDAALARANLRLNWFYEVTHLNTSLGLVEAGLGIS 242 Query: 241 ILPALALPLPEGSPLVVKR--ITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 +LP LA P E P +V R + PVV R + +VRR++ +LS AA+ D++ Sbjct: 243 VLPRLATP-QEEHPFLVTRPIVNPVVTRTIGIVRRRSATLSPAADRFIDML 292 >UniRef50_UPI00004DBCAD UPI00004DBCAD related cluster n=2 Tax=Xenopus (Silurana) tropicalis RepID=UPI00004DBCAD Length = 312 Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 106/303 (34%), Positives = 158/303 (52%), Gaps = 1/303 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 ++ SL+QL+ FV VA SF +A R+G SQ A+S +++ E G RL DR TR V +T Sbjct: 1 IDLSLQQLEAFVQVAAAGSFRQAALRLGQSQPALSRFIRQAEQTLGARLFDRDTRHVSIT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 DAG++L +R+L + + L D G SG++ VAA + S L+PQ +A R + Sbjct: 61 DAGKELLPIAQRVLRDFDDALGDFGEFMAGHSGRIVVAALPSTSIALLPQALAAFSRTHS 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + F L + P + ++ + +G DFGI + P P LQ + +PF L+C RD LA Sbjct: 121 QVTFALTEAPAEVLLALVEEGRADFGISVRPAPRQRLQYRHLFDDPFVLVCRRDDPLAAR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + VPW A ++ S RP+ DA R + + V E A+ +VAAG+GI+ Sbjct: 181 ESVPWSAFSTRPCIVAGSRSSIRPVTDAVFLRQRMPVHPVLEYPSVASCGALVAAGVGIT 240 Query: 241 ILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 LP LAL L LV + P++ R + +V R RSLS ++A + Q L Sbjct: 241 ALPMLALELLNMVELVALPLQRPLMSRPIGIVTRIGRSLSPVSKAFMASLTQQTCVLQGK 300 Query: 300 REG 302 G Sbjct: 301 AAG 303 >UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZY7_9GAMM Length = 318 Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 98/286 (34%), Positives = 154/286 (53%), Gaps = 1/286 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN SL+QL+ FVT+AQ +SF+ A E + LSQ A+S ++K +E TG L R+TR + L+ Sbjct: 21 MNVSLRQLRAFVTLAQSQSFAEASELLHLSQPALSVAIKNMEQETGGSLFSRSTRSLQLS 80 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+Q RLL + + D GR GK+RVA + + + P+ +A R YP Sbjct: 81 PEGRQFLPVARRLLADWDQAFDDLGRAFNLQQGKIRVAVMPSFAMNQFPEALAPFQREYP 140 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 DI + D + V++++R+G V+ GI +P + L+ + ++ + L H S LA Sbjct: 141 DINISVEDVVMESVIDAVREGQVELGITFEPDQMDGLEFTPLFTDRWIALVHPKSPLAAR 200 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W AL + + S SR + AL+ G+ + E AT+ MV+ G+G + Sbjct: 201 KKLSWTALMEEPFIAMNRGSWSRNTTEKALSEAGVTPTRLLEANQLATIGRMVSVGLGTA 260 Query: 241 ILPALALPLPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEAL 285 ++P L E ++ K I P +ERQ+ + RK RSLS AA+AL Sbjct: 261 VVPQLCRQQMESLGILCKTIGRPSIERQVGIFTRKRRSLSGAAQAL 306 >UniRef50_P52696 Uncharacterized HTH-type transcriptional regulator ybhD n=68 Tax=Proteobacteria RepID=YBHD_ECOLI Length = 317 Score = 163 bits (412), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 95/287 (33%), Positives = 157/287 (54%), Gaps = 1/287 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M + L +K FV +A+ SF+ A + + ++Q A++ +K++E V+L +RTTR+V LT Sbjct: 1 MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHVQLFERTTRKVTLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG++L L+ + + TL + M G V +A T + +P I + + YP Sbjct: 61 KAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +I+ + ++ MES+ + DFGI ++ + +++EPF L C RD LA + Sbjct: 121 NIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAKK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V WQ L G K++ +SG+R LI+ LA + + E+ H +T +V AG+GIS Sbjct: 181 QLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGIS 240 Query: 241 ILPALALP-LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALW 286 LP LA+P P S + + + PV+ R L ++RRK+ LS AAE + Sbjct: 241 ALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFF 287 >UniRef50_Q46SX0 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=Q46SX0_RALEJ Length = 300 Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 99/290 (34%), Positives = 160/290 (55%), Gaps = 2/290 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +N+ L+ L+ FV +A++ SF A E + +SQ A+S +++LE G RLL+RTTR V +T Sbjct: 4 INFGLEDLQAFVAIAEKGSFRMAAEALHISQPALSRRIEKLEMTLGSRLLERTTRRVDMT 63 Query: 61 DAGQQLALRLERLLDELNST-LRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRY 119 G+Q LD L+S LR +G Q G V VAA + + H +P I R+ Sbjct: 64 HIGRQFLEEARAALDILDSAVLRLGDEVGLQ-RGLVTVAAIPSAALHFLPDAICRFGNRH 122 Query: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 P ++ + D V+ S+ G+ DFG+ G +++ AI +EP+ L RD A Sbjct: 123 PGVRVRVIDENANAVLASVLSGESDFGLNFMGGQEPNIEFRAIRAEPYRLALRRDHPWAG 182 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 D + W+ L G ++V SG+R LI+ A+A + I E H + +V AG+G+ Sbjct: 183 RDCIAWEELAGQRMVSVSKQSGNRALIENAIAHLTRRPTIHYEANHVVGVLALVEAGLGM 242 Query: 240 SILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 ++LP ++LP ++ + P V+R L L+RR++R L AAEAL++++ Sbjct: 243 AVLPGMSLPRDHPRLCGIELVEPSVDRVLALIRRRDRPLQPAAEALYEIL 292 >UniRef50_Q0K6D4 Transcriptional regulator, LysR-family n=2 Tax=Cupriavidus RepID=Q0K6D4_RALEH Length = 301 Score = 159 bits (403), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 95/290 (32%), Positives = 162/290 (55%), Gaps = 1/290 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN SL+QL+ F+ VAQE+ F+RA E++ LSQS+VS + ELE + G++L DR TR++ +T Sbjct: 1 MNVSLRQLRAFIAVAQERHFTRAAEKLDLSQSSVSALIHELEGNLGLKLFDRHTRQLHIT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG +L +++ + +++S + ++ + G+V ++AS +A ++P+ I E +P Sbjct: 61 QAGAELLPLVKKAVADIDSVIENSSELRTLGRGRVSISASSIQAALMLPRVIREFCVSHP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ LHD + V + + G+VDFGI P DL ++S+PF ++ L Sbjct: 121 GVKVELHDVSEHEVTKMVSSGEVDFGIGTIPEGQPDLSAHRLMSDPFVIVMPAHHPLRRR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W+ + G ++ + R +D ALA GI V E+ P T+ MV AG+GI+ Sbjct: 181 KTLRWEDVAGLPVIGPHKGNPIRDCLDTALAARGISLQRVHEVFLPLTMVGMVDAGLGIA 240 Query: 241 ILPALALPLPEGSPL-VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 ++ A L L V PV+ R++ L+ +RSLS A+A D++ Sbjct: 241 VMSAAVTRLTSALGLATVMPTDPVIHREISLLVHADRSLSPPAQAFRDLL 290 >UniRef50_Q46WQ0 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46WQ0_RALEJ Length = 304 Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 97/296 (32%), Positives = 168/296 (56%), Gaps = 2/296 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN SL+QL+ F+ VAQE+ F+RA E++ LSQS+VS + ELE++ G++L DR TR++ +T Sbjct: 7 MNVSLRQLRAFIAVAQERHFTRAAEKLDLSQSSVSALIHELEDNLGLKLFDRHTRQLHIT 66 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG++L +++ + +++S + + + G+V +AAS +A ++P+ I E +P Sbjct: 67 QAGEELLPLVKKAVADIDSAIETSSELRTLGRGRVSIAASSIQAALMLPRFIREFSLGHP 126 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ +HD + V + + G+VDFGI P DL + ++PF ++ D L Sbjct: 127 GVKVDIHDVSEHEVPKMVSSGEVDFGIGTIPEGQPDLTAHRLSTDPFVIVMPPDHPLLRR 186 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W+ + L+ + R +D ALA GI + + E+ P T+ MV AG+GI+ Sbjct: 187 KTLRWEDVAPIPLIGPHKGNPIRDCLDTALAARGITLSRLHEVLLPLTMVGMVEAGLGIA 246 Query: 241 ILPALALPLPEGSPL-VVKRITPVVERQLMLVRRKNRSLSTAAEALWD-VVRDQGN 294 ++ A L E L V PV+ R++ L+ +RSLS A+ D ++R++GN Sbjct: 247 VMSAAVTRLTEALGLATVMPTDPVIHREISLLVHADRSLSPPAQRFRDLLMRNRGN 302 >UniRef50_A6SXB4 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SXB4_JANMA Length = 302 Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 99/286 (34%), Positives = 160/286 (55%), Gaps = 1/286 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+ FVTVA+ F+ A E +G+SQS++S V++LEN G+RL DR TR + LT Sbjct: 1 MNITLRQLRAFVTVAETGKFTLAAELLGVSQSSLSLLVRDLENLLGLRLFDRHTRRLELT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 DAG L ++ L +L S + ++ + G+V +AA +A +IP + +RRYP Sbjct: 61 DAGHDLLPVAQKTLMDLLSVVENSRDLLALKKGRVTIAAGSLHAATVIPDLLKSFNRRYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ ++ D ++ V E I G VD GI + + + I + + +L H++ L + Sbjct: 121 GIRVIVEDVAERQVRELIVAGTVDVGIGMTLDGDNSMLAQVIGRDKYAVLMHKEHQLMRK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + WQ + + +L S R +D LAR GI E+ P T+ MV AG+G++ Sbjct: 181 KTITWQDIAATQPILLKPPSLIRTYLDQHLARVGITLTPAYEVALPWTMTGMVRAGVGVA 240 Query: 241 ILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEAL 285 I+ LP+ E L ++ I+ PV+ER+L ++ R LS AA++L Sbjct: 241 IVTTGVLPVAERMGLELRTISAPVIERELAVLTRAGYPLSPAAQSL 286 >UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=Rhodobacter sphaeroides KD131 RepID=B9KVK0_RHOSK Length = 321 Score = 156 bits (394), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 87/248 (35%), Positives = 137/248 (55%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN L+ L+ FV A+ +SF A + I LSQ A++ +++LE GV LL+RTTR V LT Sbjct: 14 MNIDLEDLRAFVATAEMQSFRAAADSIHLSQPALTRRIQKLEATLGVSLLERTTRRVSLT 73 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ R R+LD+L ++L + ++ SG V +A T + + +P I+ +P Sbjct: 74 AVGRDFLPRARRILDDLETSLLSVREIAERRSGLVSIACIPTAAYYFLPDVISAFTEEFP 133 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+F + D V++SI + DFGI + D+ + ++ EPF L C RD LA + Sbjct: 134 AIRFRIFDAGANEVLQSILNREADFGITLLGADDPDVTFDPLIEEPFLLACRRDHPLARQ 193 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + V W L + V SG+R ++D ALAR ++ E+ H +T +V AG+G++ Sbjct: 194 ESVTWADLAAHRFVTVGRTSGNRLIMDLALARANVRPRSFFEVQHLSTSLGLVEAGLGVA 253 Query: 241 ILPALALP 248 LP +ALP Sbjct: 254 ALPRMALP 261 >UniRef50_Q46PT5 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46PT5_RALEJ Length = 300 Score = 153 bits (386), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 98/293 (33%), Positives = 157/293 (53%), Gaps = 6/293 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+ FV VA+ F+ A ++ L+QSA S ++ELE+ G++L+DR+TR LT Sbjct: 1 MNVTLRQLRAFVEVARSGGFTAAAPKLHLTQSATSLQIRELESQLGLQLIDRSTRRFALT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 DAG + + R++ ++ ++ DT + + G++ VA + +++ L+P+ IA YP Sbjct: 61 DAGSEFLISAMRIVGDVEQSVADTRELVHKRRGRITVATTPLLASTLLPESIAHFLDAYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV- 179 I + D P + + + GDVDFG + P +L P ++ LA Sbjct: 121 AITVRIADLPAEQIGRRVLSGDVDFGFGVFPEEDPQFDRIPLLRHPLGVMVPSSWPLATR 180 Query: 180 -EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 D V W L+G L+ +A+G R LID L + G+Q N E+ + T + AG+G Sbjct: 181 KRDLV-WSDLEGQPLIAMSHATGMRTLIDQQLHQAGVQVNPRFEVAYLGTAVGLAEAGLG 239 Query: 239 ISILPALALPLPEGSPLVVKRI--TPVVERQLMLVRRKNRSLSTAAEALWDVV 289 ++++PA L GS V R PVV RQ+ L+ R RSLS +A A D + Sbjct: 240 VTVVPAYVGKL-MGSDRVRFRPLHKPVVHRQIELIVRAGRSLSPSAAAFRDCL 291 >UniRef50_B1Z4Z1 Transcriptional regulator, LysR family n=5 Tax=Proteobacteria RepID=B1Z4Z1_BURA4 Length = 313 Score = 150 bits (380), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 99/293 (33%), Positives = 156/293 (53%), Gaps = 3/293 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +N+ L L+ F V + SF +A + I +SQ A+S + +LE GVRL +RTTR V LT Sbjct: 3 INFDLTDLQAFRAVVELGSFRKAADAISISQPALSRRIDKLEEALGVRLFERTTRSVTLT 62 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ A E+LLD+L+ L + G V +A +++ + +P IA HRR+P Sbjct: 63 TVGRVFAPSAEQLLDDLDVALLGIRDVSSSRLGHVTIACVPSVAYYFLPNVIASYHRRFP 122 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ L D V+ ++ G+ DFG+ ++ + +L E F C RD LA + Sbjct: 123 RIRVKLLDAGANEVLSAVISGEADFGVSFMGSQEPEIDFKLLLQERFVAACRRDHPLARK 182 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V W L + V D SG+R L+D AL +A V E H TL ++ AG+G++ Sbjct: 183 KRVTWNELYEYEYVSVDKTSGNRLLLDQALTTVAPRAPSVCETRHVTTLLGLIEAGLGVA 242 Query: 241 ILPALALPLPEGSPLV--VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 +P++A+P PL+ V + PVV+R++ +V+R+ R L+ AAE + D Sbjct: 243 AVPSMAMP-GHDHPLLTSVPLVEPVVKRRVGIVKRRGRPLTPAAEEFHRAIVD 294 >UniRef50_B0T3V7 Transcriptional regulator, LysR family n=1 Tax=Caulobacter sp. K31 RepID=B0T3V7_CAUSK Length = 294 Score = 150 bits (379), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 94/290 (32%), Positives = 150/290 (51%), Gaps = 1/290 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ +L Q++ FVTVA SF+RA E +GLSQ A+++ +++ E G+RL DR+TR V LT Sbjct: 1 MHITLGQIRAFVTVASTFSFTRAAEVLGLSQPALTNRIRQFEESLGLRLFDRSTRSVELT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 + G++L RL+ E + + ++ G VR+A + +A L+P IA P Sbjct: 61 NVGRELLPIFRRLVGEFEGAVINARDYASKVKGVVRLACLPSCAATLLPDLIARFQIDNP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 FV+ D V +R+ VDFGI + G GDL+ + + ++ R+ +A Sbjct: 121 SATFVVEDALNSRVATMVREDRVDFGIGMADGEAGDLELTRLFDDTLQVVHPREHPIAQA 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + + L L+L + S R L++ A G A E+ + +T +V AG+G+S Sbjct: 181 PVIDVETLSHYPLILMNRGSSVRDLVEGAFLAAGRTATPACEVTYMSTAVALVRAGLGLS 240 Query: 241 ILPALALPLPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVV 289 ILP+ A+ L + + I P R L+LVRR+N L EA D + Sbjct: 241 ILPSTAVELRSQPDVAARSIDDPAFVRTLVLVRRRNAPLRPVVEAFIDSI 290 >UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=Q122V6_POLSJ Length = 307 Score = 150 bits (378), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 93/290 (32%), Positives = 149/290 (51%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +N+ L+QL+ FV VA+ SF A E I LS A+S + +LE G RL +RTTREV LT Sbjct: 4 INFDLQQLQGFVAVAERGSFRAAAEHINLSSPALSRRIDKLETILGARLFNRTTREVELT 63 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ R LD+L S + + G+V VA + + + +P ++ + YP Sbjct: 64 PLGRVFLERARTALDDLESAMLGIADIATHRGGRVTVACVPSAALYFLPTVVSNFSQHYP 123 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ + D V++S+ G+ DFGI V ++ E+I ++PF L R+ LA Sbjct: 124 GIRVRVVDETMNQVLQSVLSGESDFGIGFMNTLVPEIAFESIHNDPFVLAMRREHPLARH 183 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V W ++ L+ +SG+R L+D +L + G+ + E+ H ATL MV AG+G++ Sbjct: 184 KSVNWADVEKESLIAVARSSGNRQLLDDSLTKAGLNPSFAFEVSHVATLLGMVEAGLGLA 243 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 +P +AL + + + P R++ L+ R L AAE +R Sbjct: 244 AVPRMALASTHATLVGLPLRQPQTVRRVGLLTRHGVKLRPAAEMFHQHLR 293 >UniRef50_A8HRF7 Transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HRF7_AZOC5 Length = 307 Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 6/298 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +NY L +L+ F+TVA+ ++F R + LS SA+S + ELE V+LL+RTTR VVLT Sbjct: 3 INYDLPELRAFLTVARLRNFGRTAAALNLSPSAISRRISELEQALNVQLLERTTRSVVLT 62 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG+ L + LL++++ L + G + V T++ + P R YP Sbjct: 63 AAGRALVAEVAPLLEKMDQGLNAIVDEARGKGGWLDVGCVTTVAFSIAPGVADRFRRAYP 122 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 D+ HD + V ES+ G V F + P +L E +L +P+ L+ RD A Sbjct: 123 DMHLRFHDDTGKRVTESVMVGGVAFAVNTLLQPPSELLAEHLLDDPYVLVLPRDHPCASL 182 Query: 181 DYVPWQALQ-----GAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAA 235 D PW L G LV +S +R +DAAL + G+ A E+ H +T+ + A Sbjct: 183 DAFPWADLSDLPRGGVPLVALKQSSANRKEMDAALEQAGVDAPWSDEVEHLSTMLGFLRA 242 Query: 236 GIGISILPALALPLPEGSPLV-VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 G +++P LAL L V+ P + R++ L+RRK+ LS A LWD+ ++ Sbjct: 243 GGVAAVMPRLALLACADWGLSHVRLCDPAIHRRIGLIRRKDLVLSEPARRLWDLFAEE 300 >UniRef50_B7RV59 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RV59_9GAMM Length = 292 Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 91/283 (32%), Positives = 154/283 (54%), Gaps = 10/283 (3%) Query: 8 LKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLA 67 ++ FV VA+ SF+RA + + SQ AV+ S+K+LE++ G++L +RTTR+V T AG++ Sbjct: 1 MRAFVVVARHGSFNRAADELSRSQPAVTLSIKQLESYVGLKLFERTTRKVTPTTAGEKFI 60 Query: 68 LRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLH 127 ERLL E + + D SG V ++ +++ ++P I+E ++PDI + Sbjct: 61 PVAERLLREFDMAIYDVTATADCRSGHVSMSVLPSVATRILPDVISEFTEKFPDISIHVS 120 Query: 128 DRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY-VPWQ 186 D Q V S+ + +VDFGI P L+ ++ + F L+CH+D LA E V W+ Sbjct: 121 DYNAQGVQRSVERNEVDFGIGSLWHPNSKLEFRPLMEDRFELVCHKDHPLAAEGAPVTWE 180 Query: 187 ALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALA 246 L+G + ++G + AL N E TLF M+ A +G+++LP LA Sbjct: 181 QLKGLSFL----STG----LTQALKMQRYIGNPKFEFTTTNTLFAMLKANVGVTVLPTLA 232 Query: 247 LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 +P E + + PV R++ ++ R++ +LS AA A+ +V+ Sbjct: 233 MP-QEDDLRSLPMVDPVETREICVILRQDWTLSPAANAMMEVL 274 >UniRef50_C8T378 LysR family transcriptional regulator n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8T378_KLEPR Length = 321 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 96/293 (32%), Positives = 146/293 (49%), Gaps = 1/293 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +N+ L F + + SF A E I LSQSA+S +++LE G RL DRTTR V LT Sbjct: 25 VNFDFNDLYAFRALMEYGSFRLAAESICLSQSALSRRIEKLETALGNRLFDRTTRRVTLT 84 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 GQ A R E+LL + + L D ++ + +G V VA + + + +P+ I RYP Sbjct: 85 LYGQNFAERSEQLLAHVETVLADISQVSKARTGLVTVATVPSAAYYFMPEIIRSFQARYP 144 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ L D V+E++ G DFG+ ++ + + + C D LA + Sbjct: 145 QVRIRLIDSSVGNVIEAVSSGQADFGLCFAKNLPASIEFTPLADDRYVAACRHDHPLARK 204 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 ++ WQA + D SG+R L+D LA + E H T+ MV AGIGI+ Sbjct: 205 THLSWQAYFEQDYIGLDRVSGNRTLLDRELAHLTPARPSICETRHVTTMLGMVEAGIGIA 264 Query: 241 ILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 +PA+++P E S L +T PVV R + L+R R S A L ++ +Q Sbjct: 265 AVPAMSMPAGEHSVLRAVPLTDPVVTRTVGLIRLSGRIQSYVAAELEKLIIEQ 317 >UniRef50_Q46Q42 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46Q42_RALEJ Length = 297 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 153/290 (52%), Gaps = 3/290 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN S+K L+ FV +A ++F+RA LSQSA S V+ LE G RL +RTTR V L+ Sbjct: 1 MNLSVKHLRAFVALATHRNFTRAARACHLSQSAFSALVQTLEEQAGSRLFERTTRHVELS 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G + RLL + + D ++ G+V +AA +I+ +P +A +RYP Sbjct: 61 ADGMRFEETARRLLGDFEAAFEDLRAHAERRKGRVSIAALPSIAGGDLPPLLAAFRQRYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I L D+ ++ +R+G DF + P DL+ E ++ + F L+C LA + Sbjct: 121 GIALELFDQLADGCIDLVRRGRADFALAPAPVQDDDLRVEPLVHDTFHLVCPTTHVLARK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + Q L G + S R +DAAL + ++ + V E+ H AT+ +V AG+G+S Sbjct: 181 RRITPQMLAGQPFIHLSRTSSVRQHLDAAL--HPLKLSSVMEVEHLATVAALVQAGLGVS 238 Query: 241 ILPALALPLPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVV 289 ++P+LAL + L V+ + P + R + LVR ++R S AA A+ D + Sbjct: 239 VVPSLALFQFQRDGLAVRPLQMPSLVRDICLVRLRDRGDSAAAAAMIDCL 288 >UniRef50_B7X3R9 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X3R9_COMTE Length = 296 Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 94/292 (32%), Positives = 154/292 (52%), Gaps = 6/292 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN+ + LK FV VA+ SF RA E + +SQ A+S V++LE ++LL+RTTR+V L Sbjct: 1 MNFDIADLKAFVAVAELASFKRAAELLHISQPALSRRVEKLEQALSLKLLERTTRKVELN 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ R + +L EL ++L + ++L G V +A ++ ++ I + +++P Sbjct: 61 AMGRVFLPRAQHVLAELEASLIGMTELNERLHGLVTIACIPSVVDTVVASAIHQIKKQFP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ + D+P ++ ++ + +VDFGI DL E + SE F L C +D LA Sbjct: 121 RIRLRILDQPAADILLTVARSEVDFGIGYLGASEPDLDFEELASESFVLACRKDHPLATR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W L V Q SG+R LID AL+ + + V E+ H +L +V G+G+ Sbjct: 181 SSICWSELAHQDCVTQAQGSGNRLLIDQALSNTVTRPHWVCEVQHVPSLLSLVRRGVGVG 240 Query: 241 ILPALALPLPE--GSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 +P A+ + G PLV P V R + L+ R+ ++LS A+ L +R Sbjct: 241 AVPQHAISGTDLCGIPLV----EPQVLRSIGLISRRGKALSAMAQELQRALR 288 >UniRef50_B1M1C3 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M1C3_METRJ Length = 315 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/296 (32%), Positives = 153/296 (51%), Gaps = 7/296 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M + ++ FV +A+ S+ RA E +GL+Q+A++ +++LE G LLDRTTR V L+ Sbjct: 1 MKLPVDGVQAFVLIAELGSYRRASESLGLTQTALTRRIQKLEGFLGAMLLDRTTRTVRLS 60 Query: 61 DAGQQLALRLERLLDELN---STLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHR 117 G++ RL+ + LR T R+G G V VA Q+I+ +P + R Sbjct: 61 AVGREFLPLATRLIADFTQGIERLRTTSRLG---VGDVTVATVQSIAFRRMPAVLQAYAR 117 Query: 118 RYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSAL 177 +P + + +R V E++R+G+ DFGI I DL + ++ +PF L+CHR L Sbjct: 118 DHPQNRVQILERSGALVTEAVRKGEADFGIHIQQEADADLLEDRLVRDPFVLICHRSHPL 177 Query: 178 AVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGI 237 A + W L G LV ASG+R ++A LA + + T +V+AGI Sbjct: 178 AGRRELRWTELSGTDLVTLGGASGNRARVEAQLAAADLPPRGRFVVESTPTALALVSAGI 237 Query: 238 GISILP-ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 G +ILP AL P + V P + R + LVRR+N SL+ AA ++ ++ + Sbjct: 238 GAAILPAALGGASPRDDLVEVLLTEPAIYRTISLVRRRNTSLTPAAAMFYEALKAE 293 >UniRef50_A9AT14 LysR family transcriptional regulator n=11 Tax=Burkholderia cepacia complex RepID=A9AT14_BURM1 Length = 300 Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 92/298 (30%), Positives = 153/298 (51%), Gaps = 12/298 (4%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M +L+ FV VA+ +F RA E++ L+Q +S +++LE GV L RTTR V LT Sbjct: 1 MKVENSELEAFVAVAELGTFHRAAEKLHLTQPGLSRRIQKLEQALGVELFQRTTRSVTLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+Q + +L L + ++ GKVRV++ T+ A L+P+ + + +YP Sbjct: 61 GVGRQFLPMAREQIAQLGMMLSSIQEIAEKRYGKVRVSSIPTVVAQLLPKVLLQYAEKYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I + D +V+ +R G +FG+ + PG DL E + + + L HRD LA Sbjct: 121 LIGVQILDGNHDFVLSQVRAGIAEFGVSLHPGDDEDLLFEPLFPDRYVLAVHRDDPLAQA 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 D V L+ A+LV+ SG+R L++ + + ++ E+ H + + +VAAG+G + Sbjct: 181 DGVTLAELRHARLVIGGRDSGNRLLLEMLMGQEAVRLRWFYEVEHISCVAALVAAGVGCA 240 Query: 241 ILP--------ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 ILP LA P P+ +PV+ R + +VR + S+S+ A L +V+ Sbjct: 241 ILPRSAVDGVGMLASPDVRAVPIT----SPVISRTVGIVRHRAVSMSSMASDLCALVK 294 >UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYF2_THERP Length = 299 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 99/294 (33%), Positives = 153/294 (52%), Gaps = 8/294 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ SL+QL+VF +VA+ +SFSRA E + +SQ AVS +K LE GV L RT R V LT Sbjct: 1 MDVSLRQLQVFRSVARHRSFSRAAEDLVISQPAVSAQIKSLEQVLGVPLFQRTGRGVELT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+QL ERLL+ L+ L + G+VRVAAS T +++P+ + HR YP Sbjct: 61 EAGRQLLPYAERLLNLLDEALAAVHELRCAQRGQVRVAASTTAGIYVVPKALGAFHRAYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVD---FGIVIDPGPVGDLQCEAILSEPFFLLCHRDSAL 177 ++ L + V + + GD D G++ DP DL+ E L ++ L Sbjct: 121 GVELSLDVLNRFAVHQRLLAGDADVAIMGLIEDP---QDLEIEQFLPNELVVIASPRHHL 177 Query: 178 AVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGI 237 A +P + ++++ SG+R ++ A G+ + E+ + VAA + Sbjct: 178 ARRHQIPLDEIAREPFLVREIGSGTRADMERIFAEAGLSPRVAMELRSNGAIKQAVAADL 237 Query: 238 GISILP--ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 G++++P A+ L L G +V+ V R LVRR R S AA+ALW+ + Sbjct: 238 GVAVMPRDAIGLELETGRLIVLDVQGFPVRRWWSLVRRAGRQPSAAADALWNFL 291 >UniRef50_A6UGP0 Transcriptional regulator, LysR family n=2 Tax=Sinorhizobium RepID=A6UGP0_SINMW Length = 298 Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 86/288 (29%), Positives = 150/288 (52%), Gaps = 1/288 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+ F+ VA+ F A + +GL+QSA+S +++LE RL DR TR V LT Sbjct: 1 MNVTLRQLQAFIAVAELGRFHLAADHLGLTQSAISILIRDLEAVLKHRLFDRHTRMVSLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG + + +++ +L + + + G+V +AA+ ++A L+P IA +RYP Sbjct: 61 TAGAEFLPQARKIMSDLEIAVTNVHELANLQRGRVTIAAAIVLAATLLPPVIARFVKRYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 DIQ + D P++ + ++++ + D GI ++Q ++ + L+C D A Sbjct: 121 DIQVQVRDMPEEEIRSALKRNEADLGIGTVSADDPEIQASVLMRDQLTLICRSDHRFARA 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V W L G L+ + R L+D AL +G++ E+ T MVA G+GI+ Sbjct: 181 PQVSWANLAGEALIGLAKDNPLRGLVDHALIASGVEVKTRYEVRFSTTAISMVAEGLGIA 240 Query: 241 ILPALALPLPEGSPL-VVKRITPVVERQLMLVRRKNRSLSTAAEALWD 287 ILP + L + +V + PV+ R + +++ + LS AA + + Sbjct: 241 ILPENSRQLTTNVDVRIVDLVDPVISRNISILQYRQPMLSPAAAKMKE 288 >UniRef50_Q7WCW0 Probable LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7WCW0_BORBR Length = 305 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 95/296 (32%), Positives = 146/296 (49%), Gaps = 3/296 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN + +QL F+ VA +SFS+A + + ++Q A++ +++LE GV L RT R LT Sbjct: 1 MNVTFRQLTAFIEVASSRSFSQAAQALHVTQPALTAMIQKLEAQLGVVLFTRTRRGAELT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G++L L+R+L L + D G V +A ++S IP IA + YP Sbjct: 61 TTGRELLPELQRILANLEVVIEDVRGAASPRGGTVTLACIPSLSNTWIPSLIARVEQAYP 120 Query: 121 DIQFVLHD--RPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALA 178 I+ +L D + + E +R GD+D+G+ L+ + + + + +D LA Sbjct: 121 RIKVILKDAMTENRSIHEMLRTGDIDYGVGSPSVEQDGLEFDLLAHDELVAVVPQDHPLA 180 Query: 179 VEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 V W L + L+ Y S R L+D A A NGI +E+ T MV AG+G Sbjct: 181 RRTLVRWSELAESPLIGMSYQSHVRMLVDEAFAANGISKRPKREVSLITTAIGMVRAGLG 240 Query: 239 ISILPALALPLPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVVRDQG 293 +S+LP A+ + + L V R+ P V R L + RSLS AA L V+D G Sbjct: 241 VSVLPTTAIEVCNVAGLKVLRLHAPRVRRPLGFLHLPTRSLSPAARLLLRFVKDAG 296 >UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A1WHL2_VEREI Length = 305 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 88/290 (30%), Positives = 145/290 (50%), Gaps = 1/290 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN+ L ++ FV VA SF A + + +SQ A+S V++LE G RL +RTTR+V L+ Sbjct: 1 MNFDLSDMRAFVAVADLGSFRAAAQTLHISQPALSRRVEKLEQAMGFRLFERTTRKVELS 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ + +L EL + L M +L G+V VA + HL+ + R++P Sbjct: 61 AIGRSFVPKARHVLSELENALLGMTDMSDRLRGQVTVACVPSSVPHLLAGAVEAFQRKFP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ L D ++ ++ + + DFG+ DL+ + ++ EPF L C LA + Sbjct: 121 RIRVRLIDETATEILLAVVRSEADFGVSYWGAQEPDLEFQGLVQEPFVLACLPGHPLARK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V W L V +G+R LID AL+ E H L ++ AG+G+ Sbjct: 181 RRVKWAELAQHDCVTLPPGTGNRMLIDQALSTVAYPPRWTCEARHVPALLSLIEAGVGVG 240 Query: 241 ILPALALPLPEGSPLV-VKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 +P A+ +G+ L V+ + P V R + +++R+ R L AA+A D++ Sbjct: 241 AVPRFAIRGGQGATLASVRLVEPEVTRTIGVIKRRARPLMPAAQAFHDLL 290 >UniRef50_A6T102 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T102_JANMA Length = 305 Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 94/284 (33%), Positives = 150/284 (52%), Gaps = 1/284 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+ FV VA+ F+ A ER+ ++QSA+S ++ELE ++L DR TR V LT Sbjct: 1 MNLTLRQLRAFVAVAELSQFTLAAERLHITQSALSMLIRELEKELELKLFDRHTRMVRLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 + G++ L R+L EL + + G+V VA S ++ L+ + E +R+P Sbjct: 61 EHGEEFLLTARRVLSELEVAVMQSRESVNYKRGRVAVACSTVLAVTLLTPFMREFAQRHP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ +L D ++ + + + GDVDF + P ++ I S+ F LL + L + Sbjct: 121 GIKLMLRDVAEESIKKRLLNGDVDFSVGTQLNPESEISELPIFSDHFVLLMPKGHPLTKQ 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 +P QA+ ++ +S R +++A L R I NI E P+T+ MV G+GI+ Sbjct: 181 TRIPLQAISQYPVIAMAPSSSIRAVLEAHLKRLDITLNIAYEASFPSTIIAMVRNGMGIT 240 Query: 241 ILPALALPLPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAE 283 ILPA A L +VV+ R + + +NRSLS AAE Sbjct: 241 ILPANAHQLTSTQGIVVRNFGKSNFTRTVCTFQLRNRSLSPAAE 284 >UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=Comamonas testosteroni RepID=D0J615_COMTE Length = 306 Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 99/297 (33%), Positives = 152/297 (51%), Gaps = 14/297 (4%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N S K L+ V ++Q KSF +A + LSQSA+S + +E G RL +RTTR V LTD Sbjct: 5 NLSTKDLRAVVALSQTKSFGQAALLVHLSQSALSALIARVEAQIGARLFERTTRAVELTD 64 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 AG + +L + LR Q +G V VAA +++A L+P+ AE R +P Sbjct: 65 AGHVFIAHAQEILRDTQRALRAVTDTVQLRTGSVTVAALPSLAASLLPKVFAEFTRIHPG 124 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSAL---- 177 ++ L D + +R G VDF + DL E ++ + FFL+C D L Sbjct: 125 VRLSLLDTLSGPAFDLVRDGKVDFALTAADPKQEDLAYEQLMEDQFFLICPDDHPLSKHA 184 Query: 178 ---AVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVA 234 A+E+ + + V ++ R IDA L G+ V E+ H AT+ +V+ Sbjct: 185 GPVAIENTLDYPH------VSMPSSASVRQYIDADLHSKGLYFAPVFEVDHIATIGALVS 238 Query: 235 AGIGISILPALALPLPEGSPLVVKRITPV-VERQLMLVRRKNRSLSTAAEALWDVVR 290 AG+GIS LP A+ L + LV ++P ++R L +V R++ S+AA+AL ++R Sbjct: 239 AGLGISALPETAVSLLQAGRLVQIPLSPPGIQRPLGMVMRRHAPRSSAAKALEALIR 295 >UniRef50_A8II36 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8II36_AZOC5 Length = 305 Score = 136 bits (342), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 157/311 (50%), Gaps = 15/311 (4%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M L+ F+ +A+ SF RA + LSQ+A+SH +K+LE+ GVRLL R+TR V LT Sbjct: 1 MRIDFLGLQAFIAIAERGSFLRAAAHLNLSQTALSHRMKKLEDDLGVRLLIRSTRVVTLT 60 Query: 61 DAGQQLALRLERLLDELNS---TLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHR 117 G+ L + ++ L L + LR+ +GQ+ +V + TI+ +P + + Sbjct: 61 PDGEALLPKAKQALAGLAAEVEALREKA-LGQET--RVALGCLPTIATSHLPHVLLDFEA 117 Query: 118 RYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSAL 177 +P + ++D + +R G FGI I + DL+ + EPF LLC + A Sbjct: 118 AHPGVAVKIYDNSASEIAGLVRSGAAAFGIGIVTAAMWDLEMTPLRKEPFLLLCPQSHAF 177 Query: 178 AVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGI 237 A + V W L+G L+ +G+R LID AL N E+ H T MV AGI Sbjct: 178 ADKRAVSWGELEGVPLIRISPQAGNRALIDDALGSRREALNWRYEVQHVQTAVSMVQAGI 237 Query: 238 GISILPALAL---PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 G++I+P A+ +P G LV R P + R L++ ++ LS A L ++VR Sbjct: 238 GLTIVPKFAMERSAIP-GLRLVTLR-NPSITRTLVVFTKRGVPLSPVARDLLELVR---- 291 Query: 295 ALMAGREGDPL 305 A +AGR P+ Sbjct: 292 ARIAGRRSAPV 302 >UniRef50_C6P9X7 Transcriptional regulator, LysR family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P9X7_CLOTS Length = 297 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 79/294 (26%), Positives = 155/294 (52%), Gaps = 8/294 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ + ++L +F++V + S S A + ++Q A+S ++ ELE ++L DR +++VLT Sbjct: 1 MDMNFRELNIFLSVCELGSMSEAARHLYMTQPAISQAISELEGEYNIKLFDRIGKKLVLT 60 Query: 61 DAGQQL---ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHR 117 AG+ L ++ LL+E +TLRD M GK+++ AS+T+ +L+PQ I E + Sbjct: 61 HAGEILRDYGKKINLLLNEAENTLRDISDMKM---GKLKLGASRTVGTYLLPQLIGEFLK 117 Query: 118 RYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSAL 177 Y +I+ + +++ I + ++D GIV P +++ + L + +L+C +D Sbjct: 118 IYKNIELPFYIDNTSEIVKMIHENEIDLGIVEGPIHSDNIEVKYFLDDELYLICSKDHNW 177 Query: 178 AVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGI 237 A + + L +++++ SG+R + + L + I+ NI E+ + V A + Sbjct: 178 AKKKIINKDDLSLENIIIREVGSGTREVFENTLKAHNIEYNIKLELNSTEAIKRAVEANL 237 Query: 238 GISILPALALPLPEGSPLVVKRITPVVE--RQLMLVRRKNRSLSTAAEALWDVV 289 G+S++ LA+ S +VK V+ RQL ++ K++ LS + D + Sbjct: 238 GVSVISKLAIKEELKSSRLVKVEIDGVKFLRQLNIIYHKDKYLSELCKKFIDFL 291 >UniRef50_Q12EW2 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12EW2_POLSJ Length = 309 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 93/290 (32%), Positives = 148/290 (51%), Gaps = 1/290 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+Q++ FV VA+ SF+RA + + L+QSA+S V+E E RL DRTTR V LT Sbjct: 1 MNVTLRQIQAFVLVARLGSFTRAAQAMHLTQSALSLLVREFEGAIESRLFDRTTRAVTLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G L R ER+L +L S + ++ + G+V VAA +S+ +P +A +YP Sbjct: 61 VVGSDLFPRAERILADLESAISGVDKLMARERGRVVVAAPLLLSSTYLPPLLAAFFAKYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ VL D V+ +R G D GI D++ + SE A + Sbjct: 121 GIEVVLQDTLPSQVLPLVRGGAADVGIGTFASDEVDVRRTLLFSEAMVAAFPVGHAFSRL 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W + ++ S R L +A A G+ +E + +L MV AG+G++ Sbjct: 181 QKLTWADVAQEPVLALSRGSVFRDLTEAGFAAAGLILKPAREANYAGSLIGMVDAGLGVA 240 Query: 241 ILPALALPLPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVV 289 ILP A+ L + + + R+ P+++R++ LV+R SLS AA+ D + Sbjct: 241 ILPGYAVKLTDPARIGWHRVENPLIDREVSLVQRAGVSLSPAAQGFVDFI 290 >UniRef50_UPI0001AEC4E8 probable transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC4E8 Length = 294 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 81/290 (27%), Positives = 152/290 (52%), Gaps = 4/290 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ S +Q+K FV VA+ +F+ A + L+Q A+S ++K++E G +L R TR V LT Sbjct: 1 MDVSYRQIKAFVEVAKSSTFAEAAVNLHLTQPALSSAIKKMEEQLGGKLFQRNTRNVSLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ L RLL + ++T D + G++ + A + + +P ++ H+R P Sbjct: 61 PEGEVLFPNALRLLHDWDNTFSDIQNLFAMAKGQLTICAMPSFAESHLPNILSVFHQRIP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ + D + V+ + G + G +P L +++ ++ F ++ ++ + + Sbjct: 121 NVNLRIVDVVMEQVIHEVTTGRSEIGFSFEPERKDGLVFKSLFADEFVVVTNKAQSAHLG 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 D + WQ LV+ + S R + LA+ G + NI+ E G +TL ++ G+GIS Sbjct: 181 DKLHWQDCLKLPLVMMNRGSAVRHWTQSKLAQYG-ELNIIAETGQLSTLGKLILNGLGIS 239 Query: 241 ILPALALPLPEGSPLVVKRIT--PVVERQLMLVRRKNRSLSTAAEALWDV 288 I+PA+ EG LV K I+ P+V + + ++R + LS A+++WD+ Sbjct: 240 IMPAICKAQMEGLGLVTKEISDMPLV-KNIGIIRNARKGLSLPAQSMWDM 288 >UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KMT5_9GAMM Length = 300 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 86/292 (29%), Positives = 150/292 (51%), Gaps = 1/292 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M + Q+ F VA+ SF+ A R+ LSQ A+S ++K LE G +L RTTR V LT Sbjct: 1 MAVPINQVMAFSAVARTGSFAEAALRLHLSQPALSIAIKNLEEALGGKLFARTTRSVTLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ RLL + +L+D GK+ +AA T + +L+P+ +A HR+YP Sbjct: 61 PEGKAFYPVARRLLSDWEQSLQDVRNHFSLRRGKLDIAAMPTYTINLLPKILASFHRQYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +I +HD + V+E +R+ + G+ DP DL + + + F + + L + Sbjct: 121 NINVTVHDVIAESVVEMVREHRCELGVTFDPDDSPDLTFQPLFIDRFIAIFPKQHPLLGK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W+ L + +G+R ID LA+ G++ E ++ MV G+G+S Sbjct: 181 GSLRWRDLLDYPHISLQKPAGTRARIDQTLAKKGLRITPAFESHQLVSIGRMVREGLGLS 240 Query: 241 ILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 ++P+ + + L + I PV+ QL ++ R+ ++LS AA+A+ ++R+ Sbjct: 241 VVPSTSRAQMKEMGLECRAIAFPVITHQLGVITRRQQTLSVAAQAMASLIRE 292 >UniRef50_Q1YQB9 Transcriptional regulator, LysR family protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQB9_9GAMM Length = 285 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 86/277 (31%), Positives = 142/277 (51%), Gaps = 10/277 (3%) Query: 14 VAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLALRLERL 73 VA E SF+RA E++ +Q A++ +VK+LE G++LL RTTR V T G+ ERL Sbjct: 2 VANEGSFNRAAEKLARTQPAITLAVKQLEGFIGLKLLQRTTRNVSTTAEGENFLPIAERL 61 Query: 74 LDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLHDRPQQW 133 + + +S + D ++ SG V +A +++ +L+P I +P I L D + Sbjct: 62 VRDFDSAIYDLRATSERRSGHVSMAVVPSVATNLLPDIIKTFATEFPGINLHLDDDSSRG 121 Query: 134 VMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED-YVPWQALQGAK 192 V + +VDFGI P L+ + ++ L+CHRD LA + WQ L A Sbjct: 122 VQHRVESNEVDFGIGSMWNPNKVLEFTPLFADKLELICHRDHPLAQHSGGIEWQQLDQAT 181 Query: 193 LVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALALPLPEG 252 + RP + G Q+ + + TL M+ + +G+S+LP+LA+P P G Sbjct: 182 FLDTGVTRDLRP------RQEGGQSKF--DFPNLTTLMAMLRSNLGVSVLPSLAIPKPAG 233 Query: 253 SPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 L+ + + P R++ ++ RK+ LS AAEA+ + + Sbjct: 234 E-LISRPLVPSESREIYIITRKDWILSPAAEAMMETI 269 >UniRef50_C0ZAD7 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZAD7_BREBN Length = 289 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 90/286 (31%), Positives = 147/286 (51%), Gaps = 13/286 (4%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +L Q++V V V +F+RAGE+IGLSQS VSH++ LE G+ L R V LT AG Sbjct: 2 TLFQMEVLVAVTNAGNFTRAGEQIGLSQSGVSHTIGALEKELGISLFTRNRSGVKLTAAG 61 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 +++ +L+ ++ + G+ L +R+A+ +++A L+P+ + YP +Q Sbjct: 62 EKIVTSARIILENVSLIKQVAAESGEHLEATLRIASFPSVTAQLLPKLLKSIESHYPHMQ 121 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAIL--SEPFFLLCHRDSALAVED 181 L++ Q + E IR G VD G + P D + E IL ++ + LA E Sbjct: 122 TKLYEGSYQEIKEWIRSGVVDVGFHVWP----DDELEGILLTTDALHAVVPAQHPLAKEP 177 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + + L ++ +G LI A A+ G+ + EI T+ MV +G+G++I Sbjct: 178 SLTLEQLARESFLMP--MAGCHLLIGAEFAKAGLTPTVSYEIADNTTILAMVESGVGVTI 235 Query: 242 LPALALP--LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEAL 285 +P+L LP LP+ + VK ITP + RQ+ L R R +A +A Sbjct: 236 VPSLTLPTQLPD---VAVKEITPPLSRQIGLAVRSLREAPSAVQAF 278 >UniRef50_B2JVU4 Transcriptional regulator, LysR family n=43 Tax=Proteobacteria RepID=B2JVU4_BURP8 Length = 322 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 82/248 (33%), Positives = 131/248 (52%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +N+ L L+ F V + SF +A E + +SQ A+S + +LE GVRL +RTTR V LT Sbjct: 3 INFDLNDLQAFRAVVELGSFRKAAEAVNISQPALSRRIDKLEEALGVRLFERTTRSVTLT 62 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ A E+LLD+L+ L + G V +A +++ + +P +A HRR+P Sbjct: 63 TVGRVFAPSAEQLLDDLDVALLGIRDVSSSRLGHVTIACVPSVAYYFLPGAVASYHRRFP 122 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ + D V+ ++ G+ DFG+ D++ + +L E F C RD LA + Sbjct: 123 RIRVKILDSSANDVLAAVISGEADFGVSFMGSQEPDVEFKMLLQERFVAACRRDHPLARK 182 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V W L + V D SG+R L+D AL + V E H T+ +V AG+G++ Sbjct: 183 KRVTWNELYEHEYVSVDKTSGNRLLLDQALGAVSPRMPSVCETRHVTTMLGLVEAGLGVA 242 Query: 241 ILPALALP 248 +P++A+P Sbjct: 243 AVPSMAMP 250 >UniRef50_A3JD31 Transcriptional regulator, LysR family protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JD31_9ALTE Length = 294 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 87/288 (30%), Positives = 145/288 (50%), Gaps = 6/288 (2%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 ++QL+ +TV +E SF A R+ +Q A+S +V+ELE G L+R ++ V LT G+ Sbjct: 7 IQQLRYVITVVEEGSFHAASRRLHRTQPALSMAVRELEQKLGQNFLERGSK-VRLTPFGE 65 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 R L+++ + RD G + +A ++++ ++P +A R+PD+ Sbjct: 66 YCLPRFRDLVNQHDRMARDVAAHADGREGHIHIATVPSVASRIMPSFLARFITRFPDVNI 125 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 LHD +V + + G+VD GI +L + + ++C RD ALA + Sbjct: 126 SLHDENAHYVCQMVANGEVDLGITSLWQNSEELHYRHLFEDKIGVVCRRDHALAQHKTLD 185 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPA 244 WQ L+G KL+ SR L++ A A + N I + +L M+ AG G++ LP Sbjct: 186 WQRLRGEKLIGN---GTSRLLMNTAAAE--LVENSAFYISNMISLLAMLEAGAGVTTLPR 240 Query: 245 LALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 LA P S + P V R++ LV+ NR+L+ AA+A+ V +Q Sbjct: 241 LAFPEQSASLCFIPLDNPDVVRRIGLVKSANRTLAPAAQAMEAFVLEQ 288 >UniRef50_D2D3B5 FumC n=1 Tax=Sphingopyxis macrogoltabida RepID=D2D3B5_9SPHN Length = 314 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 86/287 (29%), Positives = 150/287 (52%), Gaps = 3/287 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 N L L+ FV V + +SFS A + SQ A+S ++ LE+ G L +RT+R + T Sbjct: 5 FNCELLDLRSFVAVYETRSFSHAARLLNQSQPALSRRIQRLESLVGGPLFERTSRSLAET 64 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G++L R L+ ++++L + + + + +A QT + H++P+ + P Sbjct: 65 ALGKELLPVAHRALELVDTSLFASPNVREFRWTDITIACVQTAAFHVLPRAARLYMDQNP 124 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ + D P + + G+ +FGI I+ L+ +A+ +PF L CHR LA Sbjct: 125 RVRLRILDVPAVEAADLVASGEAEFGISIESLLPSSLRFDALHEDPFGLACHRSHPLASL 184 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + + W L+G L+ AS +R L+DA LARN I E+ H T ++ A +G++ Sbjct: 185 EILEWTQLKGESLIAVHRASRNRTLLDAELARNNIALEWRYEVAHLTTALGLIDAQLGVA 244 Query: 241 ILPALALPLPEGSPLVVKR--ITPVVERQLMLVRRKNRSLSTAAEAL 285 ++P + +P G VV R + PVV+R + +V+R+ S+ AA+ L Sbjct: 245 VMPRMVMP-RSGRSEVVWRPVVAPVVQRTIGIVQRRTGSMHPAAQQL 290 >UniRef50_A3VL76 Putative LysR-family transcriptional regulator n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VL76_9RHOB Length = 302 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 93/283 (32%), Positives = 146/283 (51%), Gaps = 5/283 (1%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +LKQL+ V + S A E + ++QSA S +++ E G L +RTTR + + AG Sbjct: 10 TLKQLRAIQQVYRTGQISAAAEALNITQSATSVLIRQAETVLGATLFERTTRSLAPSAAG 69 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLS-GKVRVAASQTISAHLIPQCIAESHRRYPDI 122 + + +ER+L +L STL +T R + L G++R+ A+ L+P+ + YP + Sbjct: 70 ESVIGLVERILGDL-STLEETIRGLRDLERGRIRLTATPATGLTLLPETVRRFRAAYPAV 128 Query: 123 QFVLHD-RPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 +L D P Q+ I Q DFGI +P L +++ S+P ++C D A D Sbjct: 129 SLILDDCAPDQFYSNIIEQ-RADFGIGTEPEDKSALDWQSLNSDPLCIICAVDHPFAERD 187 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V W+ L+ L+L G R +++ LA+ I+A +V E+G + M A GIG +I Sbjct: 188 CVGWRELKDQPLILSRRDYGVRGMVETTLAKLNIRARVVAEVGFLGSAAWMSACGIGFAI 247 Query: 242 LPA-LALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAE 283 LP LA P V + PVV R LV+R+ +LS +AE Sbjct: 248 LPGRLARAQPAPGIRSVPLVDPVVARDAGLVKRRRHTLSHSAE 290 >UniRef50_A1W6X9 Transcriptional regulator, LysR family n=19 Tax=Burkholderiales RepID=A1W6X9_ACISJ Length = 310 Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 94/304 (30%), Positives = 155/304 (50%), Gaps = 17/304 (5%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN S +Q+ F+ +A +++F+RA + LSQ A S ++ LE+ G+RL DR+TR V LT Sbjct: 1 MNVSTRQIDAFLALAAQRNFTRAAAQCHLSQPAFSALIRALEDDLGLRLFDRSTRHVSLT 60 Query: 61 DAGQQL---ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHR 117 G+ ALR+ +D +TLRD + + G+V VA +++A +P +A Sbjct: 61 AEGENFHASALRIRAEVDAALATLRDAALLRR---GRVSVALLPSLAAGWLPGVLAGFRA 117 Query: 118 RYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSAL 177 ++P ++ + D + +E + G DF + +LQ E + F L+C D L Sbjct: 118 QHPGVELDIADVLSEPCIERVATGKADFALAAIRADTPELQAEPFCEDGFHLVCRADHPL 177 Query: 178 AVEDY--------VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATL 229 A + W+AL + S R ++AA + ++ + E+ AT+ Sbjct: 178 ARQPLPAGRRSAAAQWRALAEWPFIHLARHSSVRQYLEAAFHPHAMR--TLMEVEQLATV 235 Query: 230 FPMVAAGIGISILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDV 288 MV AG+GIS++P L L + L + + P + RQ+ LVRR++R LS AA+AL+ Sbjct: 236 MGMVRAGLGISVVPTLTLFHFQQEGLATRPLALPGLTRQIYLVRRRDRGLSVAAQALYAR 295 Query: 289 VRDQ 292 V Q Sbjct: 296 VMQQ 299 >UniRef50_B7RS92 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Roseobacter sp. GAI101 RepID=B7RS92_9RHOB Length = 300 Score = 130 bits (327), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 89/293 (30%), Positives = 142/293 (48%), Gaps = 6/293 (2%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N +L + + ++QE+SF A +++GLS SA+S + LE G RL DR TR V +T Sbjct: 5 NPTLLDFQAVLILSQERSFRAAADQLGLSPSALSRQITSLEARLGSRLFDRDTRSVEITV 64 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 AG A ER+++ L + G G++ +A +I+A L+PQ + +P+ Sbjct: 65 AGSAFAQIAERIINTAEDGLAEFGSYQSAQRGRLTIAGLPSITASLLPQILRNFTADHPE 124 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPV---GDLQCEAILSEPFFLLCHRDSALA 178 I + D V++++ G D G G V L E ++ + F L D LA Sbjct: 125 IDLKIIDALSGSVLDAVDSGQADIGFT--AGTVTARSRLAFEPLMEDEFVALGMPDGPLA 182 Query: 179 VEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 + W+ L ++ + + R LID R G + E+ H AT +V+AG+G Sbjct: 183 EDRAYGWEELVAMPFIVMETGTSVRELIDGTCQRFGHSLSPRFEVAHLATAGALVSAGLG 242 Query: 239 ISILPALALPLPEGSPLVVKRITPV-VERQLMLVRRKNRSLSTAAEALWDVVR 290 I++LP L L + V++ I+ R++ LVRR R+LS A A VR Sbjct: 243 ITVLPRLTLAILRSETFVIRDISDFGTRRRIGLVRRSGRTLSPTATAFLKYVR 295 >UniRef50_B9KUK0 Transcriptional regulator n=2 Tax=Rhodobacteraceae RepID=B9KUK0_RHOSK Length = 300 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 76/296 (25%), Positives = 139/296 (46%), Gaps = 1/296 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +N+ L L+ F+ + SF +A E + +SQ A++ ++ E G +L +R+TR V LT Sbjct: 3 INFELLDLRTFLAIIDLGSFRKAAEALNISQPALTRRMQAFEYKLGNQLFERSTRNVSLT 62 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 + G+++ R L E++ G SG + +A T + +P I +P Sbjct: 63 NVGREIEPMARRTLAEIDEQFGSLSDAGATRSGFISIACIPTSTLSFLPSVIGRFQTDFP 122 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +F + D V++S+ G DFG+ + A+ + F LC +A + Sbjct: 123 RARFRILDNSSAQVLDSVFDGTADFGLTFTGQSDSQFKFTALFEDEFVALCAPGDPIAQK 182 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W L L+ + +SG+R L+D L+++GI+ N E+ H +V +G+S Sbjct: 183 ARIAWSELNTLPLIGVNRSSGNRTLMDTRLSKDGIKLNWAHEVNHVIAAVGLVRQAVGVS 242 Query: 241 ILPALAL-PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 ++P +A P G ++ + PVV R+L ++ R A D+++ G A Sbjct: 243 VVPRMAYDPRLMGDLRIIPLVNPVVSRRLGILERSGARQGRLVTAFLDLLKTFGGA 298 >UniRef50_B4RYM7 Probable transcriptional regulator n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4RYM7_ALTMD Length = 287 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/283 (27%), Positives = 147/283 (51%), Gaps = 4/283 (1%) Query: 8 LKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLA 67 +K FV VA+ +F+ A + L+Q A+S ++K++E G +L R TR V LT G+ L Sbjct: 1 MKAFVEVAKSSTFAEAAVNLHLTQPALSSAIKKMEEQLGGKLFKRNTRNVSLTPEGEVLF 60 Query: 68 LRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLH 127 RLL + ++T D + G++ + A + + +P ++ H+R P++ + Sbjct: 61 PNALRLLHDWDNTFSDIQNLFAMAKGQLTICAMPSFAESHLPSILSAFHKRTPNVNLRIV 120 Query: 128 DRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQA 187 D + V+ + G + G +P L +++ ++ F ++ + A + + WQ Sbjct: 121 DVVMEQVIHEVTTGRSEIGFSFEPERKDGLVFKSLFADQFVVVANSSQAKYLSNAPSWQD 180 Query: 188 LQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALAL 247 LV+ + S R + LAR G + NI+ E G +TL ++ G+GISI+PA+ Sbjct: 181 CLLHPLVMMNRGSAVRHWTQSQLARFG-ELNIIAETGQLSTLGKLIQNGLGISIMPAICQ 239 Query: 248 PLPEGSPLVVKRIT--PVVERQLMLVRRKNRSLSTAAEALWDV 288 EG LVV++IT P++ + + +++ + LS A+++WD+ Sbjct: 240 SQMEGLGLVVRQITINPLI-KNIGIIKHARKGLSLPAQSMWDL 281 >UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AG49_CARHZ Length = 297 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 86/294 (29%), Positives = 148/294 (50%), Gaps = 9/294 (3%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 QL++F VA++KSFS A + +SQ A+S ++ LE + G +LLDRTT+ V LT AG+ Sbjct: 4 NQLEIFRVVAEKKSFSEAARLLHISQPAISMHIQALEEYYGTKLLDRTTKRVTLTPAGEI 63 Query: 66 LALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFV 125 L LL ++ RD + + GK+ + AS TI H++P ++ +R+YPD+ Sbjct: 64 LYKYTLHLLSLMDKAQRDISQAAGIIKGKLILGASLTIGGHVLPPLLSSFYRKYPDVNIT 123 Query: 126 LHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPW 185 + + V+E + +D G V G+L EA+ + ++ + LA + W Sbjct: 124 MEIMNTEKVLERVSDLTLDLGFVEGEVTTGELHVEALARDELVVVVAANHPLAGRGRISW 183 Query: 186 QALQGAKLVLQDYASGSRPLIDAALARNGI---QANIVQEIGHPATLFPMVAAGIGISIL 242 + L LV+++ SG+R +I+ L G + IV E+G + V AG+G +IL Sbjct: 184 EELATLPLVMREPGSGTRKVIEERLQAAGFKLPELKIVMELGSTEAIKGAVEAGLGAAIL 243 Query: 243 PALAL--PLPEG--SPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 + + G L+++ + + R+ +V N+ S A +AL R+ Sbjct: 244 SKWTVRREINWGIFKQLLIENLP--IYREFYVVLNNNKFHSPATQALIQFCREH 295 >UniRef50_Q7WC66 LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7WC66_BORPA Length = 320 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 91/294 (30%), Positives = 146/294 (49%), Gaps = 8/294 (2%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N +LK L F+ VA+ SF +A E SQ+AV+ +K+LE GV L RTTR+V LT Sbjct: 11 NINLKLLHTFMLVAEHCSFRQAAELSHRSQAAVTGQIKQLEAQLGVDLFHRTTRQVRLTA 70 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 G QL R + E+ + LR G++ ++ S T+S+ + +A R YP Sbjct: 71 EGAQLLESARRAVHEMENGLRQIQETVDLKRGRIFLSCSTTVSSTRLAPILAAFERDYPG 130 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDL---QCEAILSEPFFLLCHRDSALA 178 ++ + + + E++R+ + DFGI GP+ +L E IL+E + + R+ Sbjct: 131 VEVFVRELTSGDMFETVRREEADFGI----GPIMELPEFDFEPILTENLYAVVPRNLFPD 186 Query: 179 VEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 + + L L+L + + R LID G+ N + TL M AG+G Sbjct: 187 TAEQITLARLASMPLLLLNPGTALRALIDDTARSRGLTINTKFQFSQAQTLISMATAGLG 246 Query: 239 ISILPALALPL-PEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 ++LPA+ LP P V+ +P + R + +VR ++R L+ AA L +VRD Sbjct: 247 AAVLPAMVLPAKPHKDVQVLPIASPRMTRDVAIVRLRHRKLTPAAARLAQLVRD 300 >UniRef50_B4DCH5 Transcriptional regulator, LysR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCH5_9BACT Length = 298 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 87/286 (30%), Positives = 147/286 (51%), Gaps = 2/286 (0%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L QL+ F+ VA++++F+RA R+ L+Q+A+S +++LE+ L R RE LT AG+ Sbjct: 3 LYQLQYFLEVARQRNFTRAAARLHLAQAALSEQIRKLEDELATPLFQRGRRESTLTAAGE 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 L E LL+ + + SGK+ + A ++SA L+P + +R+P ++ Sbjct: 63 TLRGHAEALLERAAAARHAVQELVGLRSGKLVIGAIPSVSAGLLPAAVTAFRKRHPQVEL 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 V+ + + V E + G V+ G++ P P G +L+EPF +L A+A V Sbjct: 123 VIAEGTSEAVAEGVESGRVEMGVIQHPTPAGPFDERTLLTEPFVILAGPHHAIARHRRVS 182 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPA 244 +L G V + +R AA G + + E G T+ +VAAG+G++ILP Sbjct: 183 LASLAGEPFVF--FKGRARESALAACRAAGFEPRLACESGELETVRALVAAGLGVAILPE 240 Query: 245 LALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 LA + +V+ P VER+L++V R+ + S AA ++R Sbjct: 241 LAAQRARPACALVRLSEPKVERKLVIVTRRGHAPSPAAAEFETLLR 286 >UniRef50_C5CQD2 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CQD2_VARPS Length = 302 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 85/291 (29%), Positives = 148/291 (50%), Gaps = 2/291 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+ F VA+ SF+ A +++ L+QSA+S V+ELE GV+LLDR TR V L+ Sbjct: 1 MNLTLRQLRAFAAVAETGSFTAAAQQLHLTQSALSVLVRELEREMGVQLLDRHTRRVQLS 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG++ + RLL +L + + + G +R+AA Q ++ L+P+ IA +P Sbjct: 61 EAGREFLPSVHRLLGDLAGAVAGVTDLRDKKKGLLRLAAPQLMACTLMPRVIALYREAFP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 D+ L D + ++ + GDV+ + D G ++ + + +L+C A A Sbjct: 121 DVDVRLADTLPEHLLAGVTAGDVELAVGQDVAVDGAVERRTLFRDRHWLICPPGHAFAKR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANI-VQEIGHPATLFPMVAAGIGI 239 V W L + R L + A A + QE+ + T MVA+G+G+ Sbjct: 181 RKVRWHELGPYTFIAPTRDFRQRVLPELAPAERELMLRPGTQEVSYMTTALGMVASGLGL 240 Query: 240 SILPALALPLPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVV 289 ++ P + PL L + R+ +P R++ + R+LS AA + +++ Sbjct: 241 TVCPTYSAPLVRAHGLQMVRLESPDFHREVCIYSAARRTLSPAAASFVEIL 291 >UniRef50_Q2BJH5 LysR-family transcriptional regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJH5_9GAMM Length = 312 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 82/298 (27%), Positives = 150/298 (50%), Gaps = 4/298 (1%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N S++ L+ FV +A SF+RA E + L+QS ++ ++K+LE+ ++LLDRTTR V+LT Sbjct: 4 NISIRHLRAFVEIASCGSFTRAAENLHLTQSTLTATIKQLEDQACLKLLDRTTRRVLLTG 63 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 G+ E+L+ + ++ D Q G++ VAAS ++ + ++P I H P Sbjct: 64 EGETFLPVAEKLISDFDTAFNDLHATATQQQGQIGVAASPSMISRVLPPIIKAYHLDSPK 123 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 I L D + + + + +VDFG+ + +L +L + + ++ LA + Sbjct: 124 IGIYLRDDNASGIEQRVLENEVDFGLGGNHSNQPELSYTPVLKDRYGVVVPSGHHLAEKA 183 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQ---EIGHPATLFPMVAAGIG 238 + W + + +G+R + N + + E+ PA L ++ G+G Sbjct: 184 IIRWDEISSLPQLHLTEDTGTRSQLRKLEKENDLDLQLQGAGIEVSTPAGLAELIKTGLG 243 Query: 239 ISILPALALPLPEGSPL-VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 IS+LP+LA L + P + R++ ++ RK RSLS AAE+L ++ + +A Sbjct: 244 ISLLPSLAASTRSFDELHFIPLDEPALFREICIISRKGRSLSPAAESLLQMINEHFSA 301 >UniRef50_A9ISQ5 Transcriptional regulator, LysR-family n=1 Tax=Bordetella petrii DSM 12804 RepID=A9ISQ5_BORPD Length = 321 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 149/306 (48%), Gaps = 35/306 (11%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 + +L+QL+ F+TV + SFS A + + LSQ+A+S VKELE+ GVRLLDR TR V + Sbjct: 3 IEVTLRQLRAFITVLECGSFSVAADTMHLSQAALSGLVKELESRLGVRLLDRNTRSVSAS 62 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G + R+L +L+ L + + + G VRVAA +T+S L+P+ IA R+P Sbjct: 63 VVGTAFEPMVRRVLSDLDEALANVTNLKELRRGLVRVAAPETLSCTLLPELIAGYGERHP 122 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILS-----EPFFLLCHRDS 175 + D P + V+ ++ G D G GP G L EA+ + +P + D Sbjct: 123 GVDIRFDDVPIEQVLANLHNGSADIGF----GPAGVLADEAVQAHLVRVDPLWAALRPDD 178 Query: 176 ALAVEDYVPWQALQGAKLVLQDYASGSRPLID--AALARNGIQANIVQEIGHPATLFPMV 233 LA V W+AL+ RPLI+ L+RN + + + HP + P+ Sbjct: 179 PLAAGKSVSWKALR------------ERPLINYMPNLSRN-VLGQVPARL-HPEQIVPVH 224 Query: 234 AAGIGISIL---------PALALPLPEGSPLV-VKRITPVVERQLMLVRRKNRSLSTAAE 283 +S+L P++A L EG LV V P V ++ L R SLS A E Sbjct: 225 RVNTALSLLHVRPGYVICPSMARSLVEGFGLVFVPLCQPAVNWRIALFARSRPSLSPAVE 284 Query: 284 ALWDVV 289 + D V Sbjct: 285 SFLDYV 290 >UniRef50_D0Z9H4 Transcriptional regulator, LysR family n=40 Tax=cellular organisms RepID=D0Z9H4_EDWTE Length = 302 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 89/296 (30%), Positives = 146/296 (49%), Gaps = 1/296 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M S+KQL+ F+ VA +F++A R+ LSQ A+S +++ LE+ G L RTTR+V LT Sbjct: 1 MAMSIKQLRAFLAVAHTLNFAQASVRLNLSQPALSLAIRSLEDALGGALFVRTTRQVRLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ + +LL + ++T + GKV +AA + +A+ +P + RRY Sbjct: 61 PEGEAFFPLVRQLLVDWDNTTETIRQRFTLQVGKVAIAAMPSFAANPLPFILQRFRRRYA 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + V+HD + V E I +G V+ GI +P P L + F + A + Sbjct: 121 GVNVVVHDVINEAVYEMIAEGRVEMGIAFEPEPGARLHFTPLGMNRFIAIVPPGCPFARQ 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W+ L + S R L++ LA+NG Q + E T+ MVA G+G+S Sbjct: 181 QDIGWRQLLSLDFITLQRPSSMRLLLEQRLAQNGKQLPVAFESHQLITVGNMVANGLGVS 240 Query: 241 ILPA-LALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 +PA A + + + + I PV+E + LV + S AA+A+ D + + A Sbjct: 241 AVPAWCARQMRQLGAVCLPLIEPVIENRFGLVSLMHHPFSCAAQAMADTICEYAQA 296 >UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945AE Length = 303 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 75/289 (25%), Positives = 142/289 (49%), Gaps = 1/289 (0%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 ++ LK F+ V + KSF++A + + ++Q +S +K +E+ GV LLDR+T++V+LTDAGQ Sbjct: 9 IRHLKYFIEVVRCKSFTKAADVLHITQPTISKMIKNIEDELGVVLLDRSTKQVMLTDAGQ 68 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 + L+ ++++ + + GK+R+ + + P I E H +YP+I+ Sbjct: 69 SILLQAQQIVKSFENLSIELANTIHLKKGKIRMGLPPMVGSRFFPHIIGEFHHKYPNIEI 128 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 L + + V E + +G +D G+V+ P P G + E ++ + LA + + Sbjct: 129 QLIEEGAKKVEEQVEEGHLDIGVVLLPIPSGTFDSFPFVHEKLMVVVYPKHRLAGQTVIA 188 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP- 243 + L+ +L I R G Q +V E + MVAAG+GIS+LP Sbjct: 189 LKKLEHEPFILFREGFVLHDRIPEECIRAGFQPKVVYESSQWDFISEMVAAGLGISMLPE 248 Query: 244 ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 ++ L + + + P ++ L ++ K + +S A + V+ + Sbjct: 249 SICRELNPNRVITIPLVEPSIDWSLAMIWPKEQYISYAVREWINFVKQR 297 >UniRef50_B1M0B1 Transcriptional regulator, LysR family n=24 Tax=Proteobacteria RepID=B1M0B1_METRJ Length = 308 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 90/296 (30%), Positives = 150/296 (50%), Gaps = 7/296 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ +L+Q++ FV+V Q SF+RA + LSQ A++ ++ LE RLLDRT+R V T Sbjct: 1 MDLNLRQVRAFVSVVQAGSFTRAAALLNLSQPALTVQIRRLEETLDARLLDRTSRTVAPT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ L +R+L +L++ + DT + + G VRVA + +A ++ I +P Sbjct: 61 RLGRDLLPVFQRVLRDLDAVVVDTRDLAARRHGVVRVATLPSFAASVLSDAIVRFRAEHP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAI--LSEPFFLLCHRDSALA 178 + F + D Q V++ +R + D GIV G V D + + + ++ D + Sbjct: 121 AVTFRIKDVIAQRVLDLVRGEEADLGIV--GGDVRDPEIGVLHRTRDALHVIYPADHPIG 178 Query: 179 VEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 V AL L+L D A+ R ++D A +G + E + T MV AG+G Sbjct: 179 ALPRVTIAALAEHPLILMDPATSVRAVVDRAFIGSGRLPRVACEATYMMTAVSMVRAGLG 238 Query: 239 ISILPALALPLPEGSPLVVKRIT--PVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 ++ILP A + PL+ R P+ ER + L+++ R++ AAEA +V D+ Sbjct: 239 LTILPGAAREI-RAEPLLRSRAIDDPLFERPVCLIKKAGRTMPPAAEAFCRMVADR 293 >UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHB2_MOOTA Length = 297 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 78/249 (31%), Positives = 132/249 (53%), Gaps = 9/249 (3%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 QL F VA++KSFSRA + L+Q A+S ++ LE + G RLLDR R+V LT+AG+ Sbjct: 4 NQLLTFKAVAEQKSFSRAARVLHLTQPAISLHIQSLEEYFGTRLLDRNNRQVTLTEAGRV 63 Query: 66 L---ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 L AL L RL DE+ L D + ++ G + V A+ TI + +P E R+YPD+ Sbjct: 64 LYNYALELSRLYDEVKKALAD---ISGKVKGNLVVGATLTIGEYFLPSIAGEFKRQYPDV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L Q ++ G++D ++ +L E + + L+ H + A Sbjct: 121 EITLRIANTQEIICRTLDGELDLALIEGQAKHPNLIQEDLFQDELVLIIHPEHRWAGRRE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQAN---IVQEIGHPATLFPMVAAGIGI 239 + + L+ L+L++ SG+R + +A L + G++ + +V E+G + V AG+G+ Sbjct: 181 ITPEELREEPLILREEGSGTRQITEAGLRKAGLELSTLKVVMELGSTQAIKEAVEAGLGV 240 Query: 240 SILPALALP 248 +I+ LA+ Sbjct: 241 AIISRLAIK 249 >UniRef50_C1DSG7 Transcriptional regulator, LysR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DSG7_AZOVD Length = 299 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 91/275 (33%), Positives = 140/275 (50%), Gaps = 6/275 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ S +QL+ F+ +A+ SF+R E++ LSQ A+S+S+++LE+ G+RLL R TR V LT Sbjct: 3 MDISFRQLRAFILIAETSSFTRTSEQLHLSQPALSYSIRKLEDALGLRLLARNTRSVELT 62 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG+ + R+L +++ +RD + G +R+ A T +A +P IA R +P Sbjct: 63 PAGEHFLPQARRMLRDMDDAIRDAHEALNLIRGTIRLGALPTAAASFLPGVIAAFGRDHP 122 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ L D V ++ G+VD GI P + L E +L + LL ++ A Sbjct: 123 GVKISLRDGRAGEVKAWVQNGEVDAGITSLPEDLSGLGFEPLLDDNLVLLVRQEGASKEP 182 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 D W+ L L + RPL D AL G+ E+ H +T +V GIG S Sbjct: 183 DT--WKTLPYIALTAD---TSIRPLADEALRHLGVTTQPAWEVAHMSTAAALVREGIGFS 237 Query: 241 ILPALALP-LPEGSPLVVKRITPVVERQLMLVRRK 274 +LPA L G+ L V I R L L++RK Sbjct: 238 LLPASCTTFLHIGADLSVLPIEQPTRRSLGLLQRK 272 >UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7X5_ACIC5 Length = 305 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 83/305 (27%), Positives = 151/305 (49%), Gaps = 6/305 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M L+ ++ F+ VAQ +F+RA + + +SQSA++ +++LE GV+L DR R V LT Sbjct: 1 MINELRHIRAFLAVAQHANFTRAAQELHVSQSALTVQIQQLEEALGVKLFDRNKRRVALT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 DAG+++ L+R++ + + + T + G + +A ++++ ++ ++ +P Sbjct: 61 DAGREVIAPLQRIVVDAEAIVSRTREITGLRRGVLSMAVLPSMASGILSTALSRFTAAHP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I +HD V+E +++ +VDFG+ +L + ++ F L+ Sbjct: 121 GIMIHIHDVVADQVIEKVKKEEVDFGVATVMHADKELTLMPLFTDRLFAFLPEQHPLSSR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V Q + LVL + R ++D AL +G+ A E + +T +V AG GI Sbjct: 181 ASVSLQQISDYPLVLMARGTSVRSMVDQALRDHGLTATAAYEANYMSTALSLVRAGFGIG 240 Query: 241 ILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 ILP A + LV I P + R + ++ RK RS S A + + ++RD + Sbjct: 241 ILPEDAGTMGSAQNLVALPIVRPQLTRPIHVLMRKGRSASPAVQQMLQILRD-----ITR 295 Query: 300 REGDP 304 + GDP Sbjct: 296 KSGDP 300 >UniRef50_B4EJC5 LysR family regulatory protein n=16 Tax=Betaproteobacteria RepID=B4EJC5_BURCJ Length = 298 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 82/284 (28%), Positives = 153/284 (53%), Gaps = 3/284 (1%) Query: 8 LKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLA 67 ++ FV +A SF +A + + ++Q+A++ +++LE++ GV L++RTTR LT+ G++ Sbjct: 8 VQAFVAIADGGSFRQAADTLHVTQTAITQRLRKLESYLGVALVERTTRRTTLTEIGRRFL 67 Query: 68 LRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLH 127 + RLL+EL+ L + G G V +A T+ +P+ + P + + Sbjct: 68 PQARRLLNELSDALTEIRETGLSQRGDVTIACVPTVGVQYLPRILRAFSGHRPHDRVKIL 127 Query: 128 DRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQA 187 D V++++ + + +FGI I +L + +P+ L+C D LA + W A Sbjct: 128 DHASASVLQAVLRREAEFGISIAGDQHPELVSVPLTHDPYVLVCRDDHPLAKRRRIRWAA 187 Query: 188 LQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALAL 247 LQ L+ SG+R L++ AL +G+ + E+ +T +VA G+G +++P LA+ Sbjct: 188 LQPHPLIFAGEVSGNRGLLEGALKTSGVSLHSFYEVQRSSTALGLVAEGLGAAVVPKLAI 247 Query: 248 PLPEGSPLV--VKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 P++ ++ + P V R L+LV R++ LS AA AL+D++ Sbjct: 248 Q-KNAYPMIRTIELVEPSVSRTLVLVTRRSAQLSPAARALYDMI 290 >UniRef50_A5V780 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V780_SPHWW Length = 308 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 79/250 (31%), Positives = 135/250 (54%), Gaps = 8/250 (3%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +N +LKQ++ FV A S + A + +QS++S ++ELE G+RL DRTTR++VLT Sbjct: 4 LNVTLKQIRAFVAAADTGSLTTAAVVVNSTQSSLSVLIRELEEAIGLRLFDRTTRKLVLT 63 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AGQ+ + +R+L E+ T + ++ G+V +AA ++A L+P+ IA+ HR YP Sbjct: 64 EAGQEYLVHAQRILIEVEHAHLSTTELVERKRGRVVIAAPPIMAAALLPEIIADYHRSYP 123 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGD----LQCEAILSEPFFLLCHRDSA 176 +I V+ D P ++ ++ G +D GI G GD ++ A+L E ++ + Sbjct: 124 NISIVVEDMPPAEIVPAVASGQIDCGI----GVFGDTPDGVKAVAVLKERMLIIAKAGNP 179 Query: 177 LAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAG 236 L + W L+G +V + R +D L I V E+ T+ MV+AG Sbjct: 180 LLARPTLRWSDLRGQPVVAIKGGAQIRREVDVRLRLARITEEPVIEVRQMLTVLGMVSAG 239 Query: 237 IGISILPALA 246 +G+++ P+ A Sbjct: 240 LGVAVWPSWA 249 >UniRef50_A8FJ94 Possible LysR family transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FJ94_BACP2 Length = 290 Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 79/286 (27%), Positives = 148/286 (51%), Gaps = 5/286 (1%) Query: 7 QLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQL 66 Q KVF+TV + SF++AGE++GL+QS VSH++ +LE+ GV LL R + LTDAG+++ Sbjct: 8 QYKVFLTVVECGSFTKAGEKLGLTQSGVSHNIAKLESELGVVLLRRNRNGLALTDAGERV 67 Query: 67 ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVL 126 + +++ + ++ + G +++ + S+ ++PQ I ++YP+IQ L Sbjct: 68 MPHIRQIIHHASLLEQEAALIQGMEVGSIKIGTFSSFSSKMLPQLIHLFTKKYPNIQVEL 127 Query: 127 HDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQ 186 ++ + + E I G +D G + P + + + + +L D + + Sbjct: 128 YEGGYEEIEEWIASGTIDVGFLTQPS--REFETIPLFQDELVVLMQEDHRFNTKKVIEVD 185 Query: 187 ALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALA 246 +L ++ +G LI L G++ +++ EIG TL MV G+G++I+P L Sbjct: 186 SLHDESFIMPK--AGCDLLIKKLLKERGVKPHVLFEIGDNNTLISMVQEGLGVTIIPTLI 243 Query: 247 LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 LP P+ S V + V R++ L + + S +A+ +VV+D Sbjct: 244 LP-PQMSHTKVIPLETSVYREINLAFKSFKVASPSAKRWIEVVKDH 288 >UniRef50_Q46U73 Regulatory protein, LysR:LysR, substrate-binding n=8 Tax=Burkholderiales RepID=Q46U73_RALEJ Length = 313 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 93/293 (31%), Positives = 142/293 (48%), Gaps = 4/293 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +N S++ ++ + +A+ +F +A ++ LSQSA+S + +E GVRL DRTTR V LT Sbjct: 3 INLSMRDIETTLVLARTLNFRQAASQLHLSQSALSTQILRIEESLGVRLFDRTTRTVRLT 62 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG + L + + G+V VAA +++A ++P+ + HR P Sbjct: 63 AAGAVFMQQAALLQAAFRGAIDAVTGIASAERGQVAVAALPSLAARMLPRVLMAYHRARP 122 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV- 179 ++ + D + +R G+VDF + DL E +LS+ F LL A+A Sbjct: 123 EVALKVFDTLSGPAFDMVRAGEVDFALTAADPQQADLHYEPLLSDRFVLLIPAAHAMARG 182 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 + W A V S R + A +N I+ V E H AT+ MV G G+ Sbjct: 183 SGPLRWADTASAPHVSMTNPSSVRQYTEWAFLQNRIRFQPVFEAEHLATIAAMVECGFGV 242 Query: 240 SILPALALPLPEGSPLVVKRI--TPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 + LP +A P +V+R+ PV ER + LV +NRSLS AA L D VR Sbjct: 243 AALPEIAAGTVR-QPGIVERLLTAPVTERSIGLVTPRNRSLSPAAAELADAVR 294 >UniRef50_P37499 Uncharacterized HTH-type transcriptional regulator yybE n=4 Tax=Bacillales RepID=YYBE_BACSU Length = 292 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 1/280 (0%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 +QL+ F T+A+ + ++A + + ++Q A+S S+ LENH GV L DR R + L G Sbjct: 4 EQLEYFQTLARMQHVTKAAKSLSITQPALSRSIARLENHLGVPLFDRQGRSISLNQYGHI 63 Query: 66 LALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFV 125 R++ ++ E + + + G V + T+ L+P I + YP+I F Sbjct: 64 FLRRVQAMMKEYTEGKEEIQALLKPDQGVVSLGFLHTLGTTLVPDLIGSFQQEYPNISFQ 123 Query: 126 LHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPW 185 L W++E ++ GD+D ++ P +Q + SE F+ D LA + + Sbjct: 124 LKQNHSYWLLERLKSGDLDLCLLASIKPENPIQWIKLWSEELFVFVPNDHPLASRESITL 183 Query: 186 QALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPAL 245 + G + +L R +D + IQ NI+ E T VAAG+GISILP L Sbjct: 184 NEIAGERFILLKKGYALRMTVDELFEKANIQPNIMFEGEEATTAAGFVAAGLGISILPDL 243 Query: 246 ALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEAL 285 L + ++ P +R + + K R LS AE Sbjct: 244 K-GLDQSKITKIRVSWPECQRVIGIAWIKGRFLSPVAETF 282 >UniRef50_A0L4T1 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=A0L4T1_MAGSM Length = 307 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 84/304 (27%), Positives = 153/304 (50%), Gaps = 7/304 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M++S +L+VF VA+ SF+RA E + L+Q AV+ +++LE H RL DR + LT Sbjct: 1 MSFSDTRLRVFYAVAKHLSFTRAAEELYLTQPAVTFQIRQLEEHFDTRLFDRHHNRISLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG ++ ER+LD T + + G V+V AS TI +L+P+ +++ ++ Sbjct: 61 EAGLEVYSYAERILDLYRETEKAVSELTGVTRGVVKVGASTTIGEYLLPRILSDYRDQFN 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 D+Q L + V+ + +D G++ P ++ + L + ++ + L Sbjct: 121 DVQIRLSIDNTRTVVRKLEDATIDVGMIEGPVKNKNIARDGCLDDELVVILPPNHPLCDL 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGI---QANIVQEIGHPATLFPMVAAGI 237 D +P + L+ V ++ SG+R ++ L G+ Q +IV E+G + V GI Sbjct: 181 DEIPVKELKAYPFVSREEGSGTRQVVHDHLLHAGLPYDQLDIVLELGSTEAVKGSVEGGI 240 Query: 238 GISILPALAL--PLPEGSPLVVKRITPV-VERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 GI I+ + +L L G LV KR+ + + R + + +K + S A EA + +D Sbjct: 241 GIGIVSSASLIKELKLG-ILVAKRVQGMRITRTINFIHQKQKFRSKAVEAFINFAKDHCK 299 Query: 295 ALMA 298 +++ Sbjct: 300 HMVS 303 >UniRef50_Q1LFI3 Transcriptional regulator, LysR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LFI3_RALME Length = 311 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 83/293 (28%), Positives = 139/293 (47%), Gaps = 1/293 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN++L++ +VF V + +SFS A + I ++QSAVS +E+E G RL +R+TR+V T Sbjct: 13 MNFTLREFRVFRVVYELRSFSGASQTIHMTQSAVSKVCQEMEAKVGQRLFERSTRKVTPT 72 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 QL + +L +++ R + +G+V VA+S + L+ ++ H +P Sbjct: 73 QLAHQLYGHVCEVLGTMDAAERSMQSLLNLEAGEVSVASSPMMCVGLLRGAVSAFHEAHP 132 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ +H+ +E + G DFG+V L E + +E F++C D LA + Sbjct: 133 AIRIGMHELSTDETIEYVVNGKADFGLVSMEEAHPKLSIEHLYNESMFVICAGDHELARK 192 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V W+ L + +R ID A + + E+G + A +G++ Sbjct: 193 RKVSWELLADYPQISLHSTFSTRRTIDRVFASRHLAYSTSVEVGTVLSAISFAKARLGVT 252 Query: 241 ILPALALPLPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 +LP LV + + VE + L+ R N LST AE L D VR + Sbjct: 253 VLPGYVREFVSELGLVARALPCEGVEHPISLITRWNARLSTPAECLLDSVRKR 305 >UniRef50_B8D275 Transcriptional regulator, LysR family n=11 Tax=Clostridia RepID=B8D275_HALOH Length = 296 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 68/258 (26%), Positives = 133/258 (51%), Gaps = 6/258 (2%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +L+QLK+FV V + K+ S+A +++ +SQ A+S ++ ELE ++L DR + + LT AG Sbjct: 2 NLRQLKIFVMVCKTKNMSKAAKKLYMSQPAISQTISELEEDLNIKLFDRIKKRLKLTYAG 61 Query: 64 QQL---ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 + L + R+ L+DE + ++D M Q GK+R+ AS TI +L+PQ I +Y Sbjct: 62 KILLRNSKRILNLVDETENIIKDIVNMNQ---GKLRIGASMTIGTYLLPQIIEGFLNKYN 118 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I + + + I +D +V P D+ E + +L+C + + + Sbjct: 119 KIHLPFTIDNTKVIEDMILDNKLDLALVEGPIYCKDILVEHFFDDQLYLMCSSKHSWSHK 178 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + + L+G ++++ SG+R I+ + ++ I+ ++ + + + + +G+S Sbjct: 179 RKINSEELKGEDFIIREKGSGTRETIENIMRKHSIKYHVTHVFNNIEAIKRAIISNLGVS 238 Query: 241 ILPALALPLPEGSPLVVK 258 ILP + + L+VK Sbjct: 239 ILPEICVKEELKKGLLVK 256 >UniRef50_Q13FG1 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13FG1_BURXL Length = 313 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 91/295 (30%), Positives = 153/295 (51%), Gaps = 10/295 (3%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 SLK ++ F+ VAQ SF+RA + + L+QS+V+ + +LEN GVRL R +R V LT AG Sbjct: 6 SLKHMRAFLAVAQMGSFTRAADILHLTQSSVTALIAQLENSLGVRLFSRNSRHVELTAAG 65 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 L R RL+ + + + D R G G VRV ++ + +L +A + YP I+ Sbjct: 66 TDLLPRARRLVGDFDGLVDDMRRYGTLEKGVVRVYSALSAMEYLAAPAVAAFAKLYPSIR 125 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE-DY 182 L D + +++++ G VDFGI L ++ + + + H LA + + Sbjct: 126 VQLQDGWYRQIIDAVSSGTVDFGITSHWSDTPGLTFTPLVRDAYGMFLHAQDKLAGKGEQ 185 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQ---EIGHPATLFPMVAAGIGI 239 W+ + +V + SG+ + N + A+++ E+ T +V G+G+ Sbjct: 186 ARWRDVADRNIVDYNSLSGNTTFLR---WHNEMPASVLSPFYEVSSMGTQEALVKQGVGV 242 Query: 240 SILPALALP--LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 +ILPALA L + VV + P++ER L LV R + +LS+AA AL +V+++ Sbjct: 243 AILPALAAHCLLSSMTRFVVLQ-DPLIERDLCLVTRSDDNLSSAAMALSSLVQER 296 >UniRef50_Q47V29 Substrate-binding transcriptional regulator, LysR family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47V29_COLP3 Length = 296 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 83/294 (28%), Positives = 157/294 (53%), Gaps = 6/294 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ S+K+L++F A+ ++A + LSQSA S ++KELE G L +RT R++++T Sbjct: 1 MSISIKKLQLFEATARLGKLTKAASELSLSQSAASQALKELEQSLGYPLFERTGRDLLIT 60 Query: 61 DAGQQLALRLERLLDELNS-TLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRY 119 + G + ++ ++ D L+S L + M SG +RV AS TI+ +L+PQ IA+ + Y Sbjct: 61 ENGLKSLPKVRQISDLLDSLKLANLNTM----SGVLRVVASATIATYLLPQLIAKFVKIY 116 Query: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 P++ +H Q V++ + +G G++ P LQ + + C + +LA Sbjct: 117 PEVIPEIHIGNTQMVIDYLDKGKASIGLIEGPAVHRHLQITPWQVDKLQIFCAPEHSLAE 176 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 + + + LQ VL+++ SG+R + DAA+ + G Q ++ E+ + + V AG+G+ Sbjct: 177 KATINLEQLQQYSWVLREHGSGTRAIFDAAIEQMGAQISLGIELTRQSAIKESVKAGLGL 236 Query: 240 SILPALALPLPEGSPLVVKRITPV-VERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 L L++ + ++ +P+ + R+ LV KN ++ A+ D + D+ Sbjct: 237 GCLSQLSIAEELNNGGLIALHSPLNLSRRFALVTNKNSYHNSLAQTFIDYLMDE 290 >UniRef50_Q39JP1 Transcriptional regulator, LysR family n=11 Tax=Proteobacteria RepID=Q39JP1_BURS3 Length = 300 Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 83/249 (33%), Positives = 125/249 (50%), Gaps = 16/249 (6%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 LKQL+ FVT+A+E F RA +R+ + Q A+S +K LE G RL +R +V L+D G+ Sbjct: 3 LKQLRAFVTLAEELHFGRAAQRLFIVQPALSMQIKALEEELGARLFERDRHKVELSDTGR 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQ--QLS-----GKVRVAASQTISAHLIPQCIAESHR 117 L E +TL+ R Q +LS G +R+A ++ L+P + Sbjct: 63 V-------FLPEARATLQQAARAEQMARLSSRGEIGTLRIAFVSSVLPVLLPAVLRTMRE 115 Query: 118 RYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSAL 177 RYP I L D P + ++R +DFG++ P + +L E F + D L Sbjct: 116 RYPLITLELKDLPTPDQIAALRDRRIDFGMIRLPAAYAGIDTRVVLEEGFVVALPLDHPL 175 Query: 178 AVEDYVPWQALQG--AKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAA 235 A D + AL+G A ++ + YA G + AL+R G I QE G T+ +VAA Sbjct: 176 AAHDAISPAALRGQPAFVLARRYAPGFHDDMLLALSRAGTTLEIAQEFGEFTTMLALVAA 235 Query: 236 GIGISILPA 244 G+GI ++PA Sbjct: 236 GMGIGLIPA 244 >UniRef50_Q46S95 Transcriptional regulator, LysR family n=2 Tax=Burkholderiaceae RepID=Q46S95_RALEJ Length = 309 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 79/249 (31%), Positives = 125/249 (50%), Gaps = 11/249 (4%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L QL+ F+ V +E F RA R+ ++QS +S ++ LE GVRL DR +R V LT AG Sbjct: 5 LNQLRCFIAVGEELHFGRAATRLFMTQSPLSRQIRMLEESLGVRLFDRNSRVVRLTAAGS 64 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 L RLL + R+ + +SGKVRV + L+P IA + + P+I+ Sbjct: 65 ALLDDARRLLALAGHAVDVARRIDKGVSGKVRVGFTAVAGYELVPNLIARAMQELPEIEV 124 Query: 125 VLHDRPQQWVMESIRQGDVDFGIV-----IDPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 LH+ +E+++ G +D G + +DP +LQ +SEP L H ALA Sbjct: 125 TLHEMVTVAQIEALQAGTIDLGFLRPLPDVDP----ELQWRPAVSEPLLLAMHATHALAA 180 Query: 180 EDYVPWQALQGAKLVLQDYASGS--RPLIDAALARNGIQANIVQEIGHPATLFPMVAAGI 237 + + + L G + G LI + LA G +VQ++ ++ +V AG+ Sbjct: 181 RERIAAEDLAGQTFIQYSATEGKYFHDLIGSVLAGAGRPPRVVQQMSQTHSVLALVRAGL 240 Query: 238 GISILPALA 246 G++++PA A Sbjct: 241 GLALVPASA 249 >UniRef50_B6A2Y2 Transcriptional regulator, LysR family n=11 Tax=cellular organisms RepID=B6A2Y2_RHILW Length = 306 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 87/294 (29%), Positives = 149/294 (50%), Gaps = 13/294 (4%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 +++LK F+ + S +RA + + ++Q A+S + LE H G +LL R+ + V +TDAG Sbjct: 3 IRRLKSFIVIVDSGSITRAADLLHIAQPALSQQLAALEEHFGHKLLIRSQQGVSMTDAGH 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRV-----AASQTISAHLIPQCIAESHRRY 119 + + +L ++ D G L+G+V V +++ T+S L +AE+ +R+ Sbjct: 63 AVYRHAQIILRQMEQAQADASAAGNSLAGRVSVGLVPFSSAATLSVDL----LAETRKRH 118 Query: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 P I L + Q + I G ++ ++ GP+ ++ E ILSE FFL+ HRD A+ Sbjct: 119 PGILLHLTESVGQTYSQMIMNGRLEMALLHGTGPIKGVRFEPILSEEFFLVAHRDFAIEA 178 Query: 180 EDY-VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 + VP AL G L+L + R +D A R +V E+ TL V +G+G Sbjct: 179 DAKPVPVNALDGIPLLLPPAYNFVRRAVDTAFTRTRTNLKVVAEVEIVRTLARAVGSGLG 238 Query: 239 ISILP-ALA--LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 +I+P A+A + PL+ + ++P +E L L LS A A+ D++ Sbjct: 239 ATIMPKAIADRIVSESSEPLICRLVSPRIEETLSLCVSDQNPLSEPALAVRDIL 292 >UniRef50_Q13GE5 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GE5_BURXL Length = 303 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 89/301 (29%), Positives = 141/301 (46%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 + ++L + F+ VA+ SF RA E SQSAVS V +LE+ GVRL RTTR+V LT Sbjct: 3 LTFNLNNVITFLAVAETLSFRRAAEHTHTSQSAVSARVSQLEDRLGVRLFHRTTRQVTLT 62 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G QL + ++++ + SG++ +AA +I ++P + E HRRYP Sbjct: 63 AEGLQLFVVARTAVEDMERVAESLRKKAALQSGELTIAAVPSIGQTVLPTIMGEFHRRYP 122 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + L D Q +E + G VD IV D D+ E + + FL+ R AL Sbjct: 123 GVTLKLLDVDSQRCIEMMEAGSVDLAIVSDLEDRHDIVFEPLFRDECFLVVPRTHALGER 182 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + + L+ + +I+ A A G QE + +TL +V G G+ Sbjct: 183 RSISLREAASFPLMASPRGTTLWQIIERAFAACGATPVAHQETWNMSTLVRLVEEGFGMG 242 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 I+P + L + S V + V R + + R NRS S ++A ++ ++ L A R Sbjct: 243 IVPEICLGKLDVSRCTVLSLEEHVGRMIGVARMTNRSESPGSKAFRQLLGERTPPLRAVR 302 Query: 301 E 301 + Sbjct: 303 Q 303 >UniRef50_A4J1K6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1K6_DESRM Length = 308 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 77/292 (26%), Positives = 149/292 (51%), Gaps = 9/292 (3%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M SL Q +F TVA +KSFS A + + +SQ AVS +K LE+H +L DR T++V +T Sbjct: 1 MLLSLYQFHIFKTVADKKSFSGAAQALYISQPAVSMHIKALEDHFRTKLFDRNTQQVTIT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+ L +++L+ ++ D R + G + + AS T+ ++IP+ + ++ +P Sbjct: 61 EAGRILYKYADKILNLIDQAENDISRFTGNIEGPLSIGASFTVGEYVIPKILGTFNKEHP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ +L + ++ + + ++D G++ + +L + L + ++ D L+ Sbjct: 121 QVRALLQVTNTEQIVNLVLKQEIDLGLIENQVNKTELVAKPFLQDELIIVIPPDYPLSEH 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQ---ANIVQEIGHPATLFPMVAAGI 237 ++ + L LV+++ SG+R + +A L G+ NIV E+G + V AG Sbjct: 181 QFISMEDLVALPLVMREQGSGTRKITEARLIEEGVDLNTLNIVMELGSTEAVKEAVEAGF 240 Query: 238 GISILPALA----LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEAL 285 G +I+ A L L P+ K I+ + R+ L+ +++ +T E Sbjct: 241 GTTIISKWAVQKELKLGTLVPVRFKDIS--LFRKFYLIYHRDKFQTTVVEEF 290 >UniRef50_D0J2M8 Transcriptional regulator, LysR family n=2 Tax=Comamonas testosteroni RepID=D0J2M8_COMTE Length = 317 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 95/308 (30%), Positives = 155/308 (50%), Gaps = 27/308 (8%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N SL+QL+ F VA++ +F+ A + L+QSA+S S+++LE G+RL DRTTR V LT Sbjct: 7 NVSLRQLRAFDEVARQGAFAPAARELCLTQSALSESIRQLEEALGLRLFDRTTRTVGLTA 66 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 AGQ L + + + L ++ G + GKVR+AA+ ++ A L+ + R+P Sbjct: 67 AGQAFLLDVRQAFETLEQGFQNLGDLAALRRGKVRIAAAPSVLAVLLLPVLPALRARHPG 126 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 I+ L + + + + ++ G VDFG+ GDL + ++S+ L+ D L Sbjct: 127 IEVDLIEDSAEGIAQRVQAGSVDFGVGAAHPAGGDLLTQPLISDAMGLVARLDEPL---- 182 Query: 182 YVPWQALQGAKLVLQDYAS---------GSRPLIDAALARN-GIQANIVQ---EIGHPAT 228 LQ +L D A + I LA G+ N++Q + +P Sbjct: 183 ------LQAGRLTAADLARLPHLAFVGLTTDTAISQLLASAPGMPQNLLQTPLRLSNPQL 236 Query: 229 LFPMVAAGIGISILPALALPLP----EGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEA 284 LF V+ G+G+SI+PAL P +G P + R+ +L++R R+LS AA+ Sbjct: 237 LFEAVSLGLGVSIVPALTARHPSLGLQGDLGFRLLDEPRILRRTLLIQRPRRALSPAAQL 296 Query: 285 LWDVVRDQ 292 L+D + Q Sbjct: 297 LFDALAAQ 304 >UniRef50_Q1YUD1 Probable transcriptional regulator n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUD1_9GAMM Length = 297 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 88/291 (30%), Positives = 147/291 (50%), Gaps = 1/291 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ + Q+ VF TVA+ SF+ A ++ LSQ A+S ++K LE G +LL RTTR V LT Sbjct: 1 MSIPINQIVVFTTVARTGSFAEAAIQLYLSQPALSVAMKNLEQSLGGKLLARTTRSVTLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ RLL E +++D GK+ +AA T + + +P+ +AE H +YP Sbjct: 61 PEGKAFYPVARRLLSEWEQSMQDVRNHFALGRGKLDIAAMPTYTTNFLPKILAEFHSQYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +I +HD + V++ +R+ + GI P DL + + + F + L + Sbjct: 121 NIHITVHDVIAENVVQMVREERSELGITFAPEDAPDLHFQPLYQDRFVAILPFKHPLLEK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W L + +G+R LID AL G+ E ++ MV G+G+S Sbjct: 181 QTLKWIDLLAYPHLSLQRPAGTRKLIDQALQEKGLLLTPAFESHQLVSIGRMVNEGLGLS 240 Query: 241 ILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVR 290 ++P+ + E L + I+ PV+ Q+ +V R ++LS AA A+ ++R Sbjct: 241 VVPSTSRAQMEEMGLQCRAISAPVITHQVGIVTRPQQALSAAALAMQQLIR 291 >UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=Deltaproteobacteria RepID=A0LNI4_SYNFM Length = 302 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 95/296 (32%), Positives = 141/296 (47%), Gaps = 11/296 (3%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 + +L VF V + SF++A E + L+Q VS V+ LE G +L+DR REV+ T AG+ Sbjct: 3 IHRLVVFCRVLEMGSFTKAAEAVCLTQPTVSEHVRALEETLGEKLIDRLGREVLPTPAGK 62 Query: 65 ---QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 Q A + +L DE L + LSG + + AS +++P+ I + YP Sbjct: 63 ILYQYARDIIQLRDEAVQALE---KFKGNLSGALLIGASTIPGTYVLPELIGSFKKSYPA 119 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 IQ L V+ G V+FG++ + E S+ L RD AV Sbjct: 120 IQITLRITDSAEVVARTIDGGVEFGVIGARLEDRRIVLEEAFSDELVLAVFRDHPWAVRK 179 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGI---QANIVQEIGHPATLFPMVAAGIG 238 V + L G +L++ SG+R +++ AL +G + NIV E+G + + AGIG Sbjct: 180 SVSLEELAGEPFILRERGSGTRIVMNQALEAHGFSPTKLNIVAEMGSTEAIRQGIKAGIG 239 Query: 239 ISILP--ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 ISIL A+A L GS V R LV+RKNR +S A + +R Q Sbjct: 240 ISILSHRAVAEDLRHGSLFAVPLAGIRFSRPFFLVQRKNRQMSPLCSAFLNHLRFQ 295 >UniRef50_C2UXN9 LysR family transcriptional regulator n=1 Tax=Bacillus cereus Rock3-28 RepID=C2UXN9_BACCE Length = 284 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 78/299 (26%), Positives = 149/299 (49%), Gaps = 33/299 (11%) Query: 8 LKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLA 67 ++VF+ V + SF++AG++IGL+QS VSH++ LE GV LL R V LT AG+ + Sbjct: 1 MEVFLQVVENGSFTKAGDQIGLTQSGVSHNITALETELGVNLLKRGRNGVSLTTAGEYII 60 Query: 68 LRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLH 127 + +++ + + + GK+ + + + +A IP + ++P+I+ L+ Sbjct: 61 PHIRAIVENMAHIEQKVAAVNGMEMGKLSIGSFPSFTARFIPFLFSIYKEKFPNIEIRLY 120 Query: 128 DRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCH------RDSALAVED 181 + +++ + +G VDFG PV +++ +L++P + + ++S + +ED Sbjct: 121 EGGYDEIIKWVEEGTVDFGFA--ALPVKNVEFIHLLNDPLSAVIYEGHQFEKNSIINLED 178 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 ++ G ++ SG LI+ I+ +I +I T+ MVA +GI+I Sbjct: 179 FI------GENFIM--LRSGCETLIEEKFHTAKIKPSISYDIKDNQTVLSMVAGKLGITI 230 Query: 242 LPALALP--------LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 +P LALP LP + P + R++ LV++ + L+ AA +V+D Sbjct: 231 MPDLALPKKLKDIRSLP---------LNPEIFREIGLVKKSAKELTPAATEFSKIVQDH 280 >UniRef50_C5CZL1 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZL1_VARPS Length = 299 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/249 (31%), Positives = 132/249 (53%), Gaps = 4/249 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN + +Q++ F VA+ SF+RA E ++Q+ +S ++E+E G RL DRTTR V LT Sbjct: 1 MNLTTRQMRAFRQVARTGSFTRAAELTHMTQAGLSILIREVERQLGARLFDRTTRAVQLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG++LA +ER+L EL+S ++ G +G +R+AA+ +S+ L+PQ +A + P Sbjct: 61 AAGRRLAPVVERVLGELDSVTQEIGILGDAARQNLRIAATPLVSSQLLPQLLAMFRQAQP 120 Query: 121 DIQFVLHDRPQQWVMESI--RQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALA 178 +Q L D + V ++ + D+ G P G ++ E + S + + A Sbjct: 121 HVQVHLLDAALEDVERAVLADEADLGLGFFFKAAP-GLVRTE-VASFQLMRVTAAEGAQR 178 Query: 179 VEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 VPW AL+ A+L+ + + +IDA L + I + + TL MV AG G Sbjct: 179 RVGRVPWSALKSAQLIGLPAGNPIQKVIDAQLGKLNIVNPEGRSVSFFGTLISMVEAGFG 238 Query: 239 ISILPALAL 247 +++P A+ Sbjct: 239 TAVMPTFAM 247 >UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Tax=cellular organisms RepID=CYNR_ECOLI Length = 299 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 83/297 (27%), Positives = 145/297 (48%), Gaps = 2/297 (0%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 + + F+ VA+ SF+RA + +SQ A+S +++LE GV L DR+ R + LTDAG+ Sbjct: 4 RHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEV 63 Query: 66 LALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFV 125 R L EL + R + G +R+A + T +++ I +A+ + RYP I Sbjct: 64 WRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQ 123 Query: 126 LHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPW 185 L + Q+ + + + + ++D GI P +L+ +L+E L+ + LAV + V Sbjct: 124 LQEMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIPLLTESLALVVAQHHPLAVHEQVAL 183 Query: 186 QALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPAL 245 L KLVL +R ID + G+ +V E + + ++ ++LPA Sbjct: 184 SRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLLPA- 242 Query: 246 ALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGREG 302 A+ + P++ER +L+RRKN + AA+A + D+ A++ G E Sbjct: 243 AIATQHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALDKC-AVVGGNES 298 >UniRef50_B4WIK9 LysR substrate binding domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WIK9_9SYNE Length = 316 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 80/253 (31%), Positives = 138/253 (54%), Gaps = 10/253 (3%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L QL++ V VA+ +FS A +G+SQSAVSH++ LEN+ G+ L +R +LT G Sbjct: 11 LSQLQILVAVAEYGNFSEAALSLGISQSAVSHAIASLENYLGIVLFNRGRHGAILTPVGD 70 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 ++ + + + + ++ L++ G+VR+A+ ++IS H++P+ I H++ P I Sbjct: 71 RILMHAKTITNSTDAILQEAAAAKGLEKGQVRIASFRSISTHILPKAIKTFHQKLPGITI 130 Query: 125 VL--HDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L HD + V +++++G D GIV+ P G L +L + F +L D+ L + Sbjct: 131 SLTEHDT-NKAVEQALKEGRADIGIVLMPAGEG-LTAWELLQDEFVVLLSPDTHLE-GNS 187 Query: 183 VPWQALQGAKLVLQ--DYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W+ L L++ DY + RP+ + A G N+V E+ A + +V G+G + Sbjct: 188 LTWRELSEQPLIMSPIDYPA-MRPVYEHINAL-GYWLNVVNEVETDAAIVNLVEQGLGGT 245 Query: 241 ILPALAL-PLPEG 252 ILP LA P+PE Sbjct: 246 ILPKLAAEPIPEA 258 >UniRef50_Q127N6 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q127N6_POLSJ Length = 328 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 84/290 (28%), Positives = 140/290 (48%), Gaps = 1/290 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+ FV VA+ SF+ A + ++QSA+S +KELE+ GV+++ R+TR+V L+ Sbjct: 1 MNVTLRQLRAFVAVAKSASFTEAAATLHITQSALSGLIKELEHVLGVQVVYRSTRKVQLS 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 + G + R+L +L+ + SG VRVAA Q ++ L+P IA + +YP Sbjct: 61 EVGGEFLPLATRILQDLDEAYHAIHDLKALKSGVVRVAAPQLMACTLMPDAIAAFNSKYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +Q L D + V + G+VDF I + ++ ++ PF + D L Sbjct: 121 AVQIRLSDCAVEAVQSKVHSGEVDFAIGPEREVSPEIATHSLFEIPFVAVFPPDHPLGKL 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V W + L+ R D A + + E+ T MV+AG+G++ Sbjct: 181 KRVTWTDISRYPLISLQGEYTQRLSADLQAASGNLTLSPGMEVTFMTTALSMVSAGLGVT 240 Query: 241 ILPALALPLPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVV 289 A L L + + P + R+ L+ +K+R LS AA+ D + Sbjct: 241 TCLPYATSLLNLYGLQTRLLQAPTLRRKFYLLTKKDRPLSPAAQGFSDFL 290 >UniRef50_UPI0001C36FDC transcriptional regulator, LysR family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36FDC Length = 293 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 81/283 (28%), Positives = 140/283 (49%), Gaps = 8/283 (2%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 ++ LK F+ VA+E+SFS A ER+ LSQ +S +KELE+ G +LL R+++ V LT+ G Sbjct: 3 IRVLKYFLAVAREQSFSVAAERLFLSQPTLSRQIKELEDELGTQLLIRSSKGVTLTEEGM 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 L R E + + L+ T ++ + G+Q+SG V + A +T + LI + + YPDIQ+ Sbjct: 63 ILRARAEEITELLDKTEQEVRKSGEQVSGMVYIGAGETYAIKLIADIAKKLNADYPDIQY 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAI-LSEPFFLLCHRDSALAVEDYV 183 ++ V+E + +G +DFGIV + + F +L +DS LA ++ + Sbjct: 123 SIYSADASDVLEKLDRGLLDFGIVFQNVDTSKYNSVPLPQKDTFGVLMRKDSPLAQKESI 182 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFP---MVAAGIGIS 240 L+G L++ + + +D GI + L+ M + G+G Sbjct: 183 SLSDLKGQPLIIPRQPNHNSMFLDML----GIDEESIHITAQYNLLYNGSVMASEGMGYC 238 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAE 283 I + + S + K +P +E + ++N S AAE Sbjct: 239 ICIDRLINVTGDSNMCFKPFSPAIEASCSFIWKRNAVFSRAAE 281 >UniRef50_A5WE98 Transcriptional regulator, LysR family n=2 Tax=Psychrobacter RepID=A5WE98_PSYWF Length = 321 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 93/301 (30%), Positives = 151/301 (50%), Gaps = 26/301 (8%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL F+ VA+ SF+RA +++ L+QSAVS +KELEN V L DRTTR++ L+ Sbjct: 1 MNITLRQLNAFIHVAETGSFTRASDKMHLTQSAVSGLIKELENTLNVVLFDRTTRQLSLS 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G L + R+L+EL + + G VR+A SQ +A +P IA+ + YP Sbjct: 61 VVGHHLLPQARRVLNELTLFENEASSLTSLAQGTVRLAVSQ-FAASSMPAVIAQFAKLYP 119 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGP---VGDLQCEAILSEPFFLLCHRDSAL 177 +I+ L D + V++ I +VD G+ ++ +L + + PF ++ + L Sbjct: 120 EIKVSLLDCSAEDVLQHIENIEVDLGVGVELNTDQNDENLSADLLYELPFCIVLPQAHPL 179 Query: 178 AVEDYVPWQALQGAKLVLQDYASGSRPLIDAALAR----NGIQ-ANIVQEIGHPATLFPM 232 A E V W L G L+ + + P ID +Q N ++ +T M Sbjct: 180 ACEPVVKWDDLLGLPLI-----TLNGPFIDHVTLELSEPMALQIKNAAYKVNFMSTALEM 234 Query: 233 VAAGIGISILPALALP-LPE------GSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEA 284 G G++ L LP +PE + LV+K + PV R+ + +R +R+LS A++ Sbjct: 235 TRQGFGVT----LCLPYMPEVIDWISANNLVLKCLAEPVKLRKFYIYQRSSRALSPASKT 290 Query: 285 L 285 Sbjct: 291 F 291 >UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=Proteobacteria RepID=A1WVW1_HALHL Length = 318 Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 85/296 (28%), Positives = 147/296 (49%), Gaps = 3/296 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+VF +VA+ SF+RA E + L+Q AVS +K+LE G+ L ++ + + LT Sbjct: 1 MNITLRQLQVFESVARHLSFTRAAEELYLTQPAVSMQIKQLEQQVGLPLFEQIGKRIYLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+++ +R+ EL + SG++R+ + T + + +A RR P Sbjct: 61 EAGEEVRRYAQRISAELRELADGLEALRGLNSGRLRLTVASTAN-YFATDLLAAFTRRQP 119 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + F L ++ V+ I+ ++D ++ P D+ EA + P ++ D LA Sbjct: 120 GVTFQLEVTNREGVIRRIQDNEMDLAVMGRPPEGLDVAAEAFMPNPLVIIAAPDHPLADG 179 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 +P + LQ VL++ SG+R + L G+ E+ + V AG+G+ Sbjct: 180 SPIPLERLQDELFVLREQGSGTRNAVQRVLEERGMNLRGGLEMSSNEAIKQSVQAGLGLG 239 Query: 241 ILP--ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 ++ +AL L G V+ +ERQ LV R + LS AAEA + D+ + Sbjct: 240 VVSIHTVALELELGRLRVLNVEGFPLERQWYLVHRSGKRLSPAAEAFRQFILDEAH 295 >UniRef50_Q01RY1 Transcriptional regulator, LysR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01RY1_SOLUE Length = 307 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 73/244 (29%), Positives = 128/244 (52%), Gaps = 3/244 (1%) Query: 7 QLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQL 66 +L+VF VA+E SF+RA ER+ L+Q AV+ VK LE G+RL DRT + +VLT AG+ L Sbjct: 5 RLRVFRIVAEELSFTRAAERLFLTQPAVTMQVKNLEEELGLRLFDRTGQRIVLTPAGRIL 64 Query: 67 ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVL 126 +R+ RD + + G++ + AS TI+ +L+P+ E +P IQF + Sbjct: 65 DDYTKRIAALCGDAERDLAVLKGETRGRLALGASTTIAQYLLPRLAGEFLAAFPAIQFSI 124 Query: 127 HDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQ 186 ++ ++ G + G++ P D++CE + + L+ A + Sbjct: 125 ISGNTSDIVAALADGRIGLGLIEGPAGRSDVKCEPFVEDEIVLVTPPAHEFAAGGELDPA 184 Query: 187 ALQGAKLVLQDYASGSRPLIDAALARNGIQA---NIVQEIGHPATLFPMVAAGIGISILP 243 AL+ A ++L+++ SG+R +++ AL R + I E+ ++ +AAG+G+ + Sbjct: 185 ALKAASIILREHGSGTRQVVEEALKRARLDTRGLKITLELDSTESIKSAIAAGLGVGFVS 244 Query: 244 ALAL 247 AL Sbjct: 245 RWAL 248 >UniRef50_C1SP16 Transcriptional regulator, COG0583 n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SP16_9BACT Length = 315 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 76/280 (27%), Positives = 135/280 (48%), Gaps = 9/280 (3%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 KQ++ FV VA+ KSFSRA E++ LSQ +S + LE GV+L DR ++EVVLT+AGQ Sbjct: 22 FKQIEAFVFVAKYKSFSRAAEKLLLSQPTISTHISTLEEQLGVKLFDRLSKEVVLTEAGQ 81 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 +LD + ++SG + + S + ++P+ I + Y F Sbjct: 82 VFYPYAVDILDLRERSHEAVKEFLNEVSGHLHIGYSTVAAEFILPEVIKKFKEDYYKTFF 141 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 L + Q V++ + G +D IV P DL+ + + + L+ H++ D V Sbjct: 142 TLDNGNTQNVIQRLSDGILDLAIVARKIPKKDLEYKVLTKDKIVLIVHKNHKFFTRDSVF 201 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPM---VAAGIGISI 241 + + G + + ++ SG+R ++ A G + + + ++ F + V +GI+ Sbjct: 202 IEEILGEEFITREVGSGTRASVEHAFKNKGYDFDSLNAVAVLSSTFSIRNAVKRELGIAF 261 Query: 242 LPALALPLPEGSPLVVKRITPV----VERQLMLVRRKNRS 277 + +AL + V + PV VE+ + +V KNR+ Sbjct: 262 MSEMALAEDDHDTSV--KAIPVTDLMVEKDVYVVYSKNRT 299 >UniRef50_B1KU62 Transcriptional regulator, LysR family n=10 Tax=Clostridium RepID=B1KU62_CLOBM Length = 293 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 71/285 (24%), Positives = 141/285 (49%), Gaps = 18/285 (6%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 ++L++F VA++ + + E++ +SQ AVS ++ ELE+ GV+L DR R + LT+ G+ Sbjct: 4 RKLRIFYEVAEKLNMTEVAEKLYISQPAVSQTILELESELGVKLFDRINRRLYLTNEGEL 63 Query: 66 LALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFV 125 + R+L+ + +R + +GK+++ AS TI +++P I + ++Y I Sbjct: 64 FLNYVRRILNMYDDAIRSLKDINSLKTGKLKIGASTTIGIYILPDIIGKFTKQYKGIDTS 123 Query: 126 LHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPW 185 + + + + I +DF V GPV + E I+ E F C + PW Sbjct: 124 IAIENTKLISDMILDNSIDFAFV--EGPVYN---EEIIKENF---CDDELVFITSPEHPW 175 Query: 186 Q--------ALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGI 237 + K+++++ SG+R + ++ + N + NI E+G+ + V AG+ Sbjct: 176 SNKDEISITEVDKEKIIMREIGSGTREVFESYMTANNVNYNIAFELGNTEAIKKAVEAGL 235 Query: 238 GISILPALALP--LPEGSPLVVKRITPVVERQLMLVRRKNRSLST 280 G+S + + + + K ++R+L+L+ K++ LST Sbjct: 236 GVSCISKRCIKNEINNNTLSWTKLKEFEIKRKLILIYHKDKFLST 280 >UniRef50_Q1V682 Putative transcriptional regulator protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1V682_VIBAL Length = 304 Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 80/279 (28%), Positives = 142/279 (50%), Gaps = 10/279 (3%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ S +QLK F+ +A+E++F+ A E++ ++QSA+S +K+L L R R+++LT Sbjct: 1 MDISYRQLKAFIALAEEQNFTYAAEKVHITQSALSQMMKKLTQQLTSELYQRQGRKIILT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+QL +++ L+ ++ + + V++ T+ A L P+ + + +RYP Sbjct: 61 EAGEQLYQEARFIVNRLDKLVQQNKDRQHGYNKSLVVSSLYTLCASLAPKTLNDLKKRYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 D F L + + S+ QG D GI +P +L + + + +C +D LA Sbjct: 121 DFTFRLIEERVDDITHSVLQGQADIGINTNPNH-PELNFDLLFRDYLCFVCRQDHPLAEH 179 Query: 181 DYVPW-QALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 V W QA Q A + + + R L D A R G+ + H +TL M+++G+G Sbjct: 180 KQVSWEQAHQYASIGVSP-GNSLRTLADEAFQRIGLTYDPELSASHTSTLLGMISSGLGS 238 Query: 240 SILPALALPLPEGSPLVVKRITPVVE----RQLMLVRRK 274 +IL + + E S V R P+V+ R + L+ RK Sbjct: 239 TILSS---TIGELSNNVEVRFIPIVQPVQYRSVGLITRK 274 >UniRef50_B6FPK4 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPK4_9CLOT Length = 301 Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 75/295 (25%), Positives = 154/295 (52%), Gaps = 12/295 (4%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +++ L+ FV V Q++S ++A E + +SQ +VS +++ELEN+ +RL DR + + +T+ G Sbjct: 2 TIRHLRTFVIVFQKESITKASEILHVSQPSVSLAIQELENYYHIRLFDRIGKRLSITEQG 61 Query: 64 QQL---ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 + L AL + + DE+ + ++ G +R+ +S TI ++PQ I E +RY Sbjct: 62 KWLYDYALHIVSMFDEMETEVKTWNN-----KGTLRIGSSITIGNFILPQLIEEFQKRYR 116 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +++ + + + + I +VD ++ +Q E ++ +P L+C +S L + Sbjct: 117 EVEIKVSVCNTKTIEQYILNNEVDLALIEGKTEYEQIQMEHLMEDPLCLICAANSELVKQ 176 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + + L+ ++L++ S R +I+ +L + I ++ E + VA +GIS Sbjct: 177 EKISLIDLERYPMILRERGSAVREMIEESLGYHQIHHRVIWESVSTQAIIRAVAKKLGIS 236 Query: 241 ILPALALPLPEGSPLVVKRITPV---VERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 ILP L L E + +VK++ + RQ + K + L+ AA+ ++ +++ Sbjct: 237 ILPYL-LVRDELARGLVKQLQVEEFHLSRQFSIAYHKKKYLTPAAKGFMELCKEK 290 >UniRef50_B2I0F8 Transcriptional regulator n=13 Tax=Acinetobacter RepID=B2I0F8_ACIBC Length = 293 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 74/283 (26%), Positives = 142/283 (50%), Gaps = 7/283 (2%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +LKQLK F+ +A+ +++ A + LSQSA+S ++K LE G +L +R TR V LT G Sbjct: 2 TLKQLKAFLALARTLNYANASLELHLSQSALSLTIKSLEEELGGKLFNRNTRRVELTQEG 61 Query: 64 QQLALRLERLL---DELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 + L ++LL DE+ + ++ ++ + G + +A+ ++ ++P+ I + +P Sbjct: 62 KSLIPYAKKLLANWDEMENDVKQRFKLNR---GTLSIASMPFVTHAILPEVIHQFLAVHP 118 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ F +HD P + ++E ++ G + GI +P L+ + + E F L + LA Sbjct: 119 NLNFSIHDIPNETIIEKVQDGIFELGICFEPDLTEGLEFKPLFEEDFLALLPKSHPLAQS 178 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W L V S R L++ RN I ++ E ++L VA GIG+S Sbjct: 179 SSITWHELCSNPFVTLQKPSIVRYLVEQNCLRNNITLDLKVECHQISSLSSFVAYGIGVS 238 Query: 241 ILP-ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAA 282 +P A + + +++ + + + +V +KN +S + Sbjct: 239 AIPRHFAKHIDKEHNVLIDLKDEAIHKTVGIVYKKNFEISNIS 281 >UniRef50_Q0TQC8 Transcriptional regulator, LysR family n=10 Tax=Clostridium RepID=Q0TQC8_CLOP1 Length = 294 Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 75/296 (25%), Positives = 153/296 (51%), Gaps = 10/296 (3%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN+ ++LK+F A+ + ++ + + +SQ ++S ++ ELE+ V+L DR + + LT Sbjct: 1 MNF--RKLKIFFETAKCLNMTKVAKSMYISQPSISQAIAELESDLDVKLFDRIGKRLYLT 58 Query: 61 DAGQ---QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHR 117 G+ + + R+ L +E NST+R + + GQ+ GK+ + AS TI +++P+ I E + Sbjct: 59 HEGEVYFEYSRRILNLYEEANSTIR-SSKEGQK--GKIVIGASTTIGIYILPELIKEFNE 115 Query: 118 RYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSAL 177 + +I+ L Q + E I + VD +V +L+ I + + + ++ + Sbjct: 116 LHKNIEISLIIENTQLIEELIMENKVDIALVEGYVKSDELEVFDIGKDELIFIANPNNPI 175 Query: 178 AVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGI 237 +D + + L+ K ++++ SG+R +I+ L G N+ E+G+ + +V G+ Sbjct: 176 FSKDKITLKDLEDEKFIMREPGSGTREIIENYLINKGCNYNVYMELGNTEAIVRVVETGL 235 Query: 238 GISILPALALP--LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 GI+ + A+ + EG +K V R L L+ K++ +S E D +++ Sbjct: 236 GIACVSCKAIDERINEGLIKEIKIDDIKVSRDLYLIYHKDKFISKNLEIFIDKIKN 291 >UniRef50_C9PJ12 Putative transcriptional regulator protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PJ12_VIBFU Length = 308 Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 72/276 (26%), Positives = 135/276 (48%), Gaps = 2/276 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ S +QLK F+ +A+E++F+ A +++ ++QSA+S +K+L L +R R +VLT Sbjct: 1 MDISYRQLKAFIALAEERNFTYAADKVHITQSALSQMMKKLAQQLSCELFERKGRTIVLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG L +++ L +++ + + V++ T+ A L P+ + + +RYP Sbjct: 61 EAGHHLYQEARFIVNRLEKLVQENHDRQHGYNKSLVVSSLYTLCASLAPKTLNDLKKRYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 D F L + + S+ +G D GI +P DL + + + +C D LA + Sbjct: 121 DFTFRLIEERVDDITHSVLEGRADIGINTNPNH-PDLNFDLLFRDSLCFVCRADHPLAEQ 179 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W+ + + R L D A +R G+ + H +TL M+A+G+G + Sbjct: 180 QDISWEQAHQYATIGVSPGNSLRTLADEAFSRVGLTYDPEFSASHTSTLLGMIASGLGST 239 Query: 241 ILPALALPLPEGSPL-VVKRITPVVERQLMLVRRKN 275 IL + L + + + PV R + L+ RK+ Sbjct: 240 ILSSTIAGLNASDTIRFIPIVQPVQFRLVGLITRKD 275 >UniRef50_A6SW66 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SW66_JANMA Length = 289 Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 81/289 (28%), Positives = 137/289 (47%), Gaps = 4/289 (1%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+ L+ F+ AQ +SF+RA E + ++Q +SH +K++E+ G++L DR R V LT AG+ Sbjct: 3 LRHLRYFLAAAQSQSFTRASESLHITQPTLSHQIKQIEDELGIQLFDRVGRVVKLTTAGE 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 + +R L E+++ L + G+V + +P +A+ ++ YP I+ Sbjct: 63 LFQVYAKRALLEVDAGLDALNELENLKHGRVTFGVLSSFGTFHLPPILADFNKVYPGIKI 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 + + E + GD+ FG+ P + E + + P L+ L + Sbjct: 123 TVLRLRSGEIEERLLDGDLHFGVAYAPSSTEQINVEPLFTVPLALVVGDHHPLVGSAGIT 182 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPA 244 L +LV+ SR ++DA L NGI IV E+ + P++A S+ Sbjct: 183 LNELNEHELVMLSDEYNSRKMMDAILLANGITPRIVMEMN---AIEPILATVRHSSLATI 239 Query: 245 LALPLPEGSP-LVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 L+ L + P L +TP V + L R+N LS AA AL D +R + Sbjct: 240 LSANLVDEMPGLHQVPLTPTVTHTVGLFTRRNSHLSAAARALVDTIRQR 288 >UniRef50_A8SN43 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SN43_9FIRM Length = 330 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 76/304 (25%), Positives = 143/304 (47%), Gaps = 11/304 (3%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 KQL+ F+T+ + KSF++ + + ++Q +V++ ++ LE+ L RT R V LT AG Sbjct: 23 FKQLETFITIVKTKSFTKTADVLYITQPSVTNHIQALESELNTSLFVRTRRSVTLTQAGS 82 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 + +L + +RD Q L G + + S ++P I + + +PDI F Sbjct: 83 IVYKHALNILASYDEIIRDLDIYSQNLKGTLNICVSSVPRKIILPNLIEKFSKLFPDISF 142 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY-- 182 + + + V++SI G+ DFGIV L I+ + + ++D+ +++Y Sbjct: 143 NISNDDSRTVIDSILVGETDFGIVGLKISNPKLIYTQIMDDHIVYVVNKDAYPDLKNYSV 202 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARN---GIQANIVQEIGHPATLFPMVAAGIGI 239 + + L K++L++ SG+R +++ L RN + +N V I T+ ++ G+G Sbjct: 203 INIEDLSNDKIILREIGSGTRQIVEDELKRNNSLNVISNSVATIHDTNTILDLITKGVGS 262 Query: 240 SILPALALPLPEGSPLV----VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 + L L + V +K + + R+ V KN S + D + D+ N Sbjct: 263 GFISQRMLNLSDFKDKVKILNIKNL--YLNRKFYFVYNKNLQFSNINKIFKDFMMDEINE 320 Query: 296 LMAG 299 L G Sbjct: 321 LKKG 324 >UniRef50_Q13R34 Transcriptional regulator, LysR family n=2 Tax=Burkholderia RepID=Q13R34_BURXL Length = 311 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 83/304 (27%), Positives = 144/304 (47%), Gaps = 21/304 (6%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN SLKQLKVF+ VA SF++ + + LSQ+A+S ++ELE RLL+RTTR V LT Sbjct: 1 MNLSLKQLKVFLGVANTSSFTKTAQSVHLSQAALSAIIRELETQLSCRLLERTTRTVSLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+ ++++ L ++ + +G+Q + + + I+A L+P + R YP Sbjct: 61 EAGRVFYPTAMKIVETLEKSVIELNELGRQKQSSLLLGCTPMIAASLMPPVLVRFSRMYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVD--FGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALA 178 D Q L DR +++ + +G +D FG+ Q I P F H + A Sbjct: 121 DSQIELVDRAPSELLQMVEEGHLDAAFGVFFS-------QLSGIDRVPIF-PTHLVAISA 172 Query: 179 VEDY-----------VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPA 227 V+D + W +L+G L+ + + LI+A L++ + + +GH Sbjct: 173 VDDMPEKNGGRSAAGIRWTSLEGRPLITLPKDNPLQRLIEATLSKEEVNVSRRIVVGHMQ 232 Query: 228 TLFPMVAAGIGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWD 287 T M G+G +++P+ + + + I P V + R R TA + + Sbjct: 233 TAVAMAQEGLGTAVMPSFCEHICRRYRVRIDPIRPEVPLSFYRITRTGRDTLTALDQFTE 292 Query: 288 VVRD 291 + + Sbjct: 293 MFTE 296 >UniRef50_B9QYV9 LysR substrate binding domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QYV9_9RHOB Length = 303 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 93/301 (30%), Positives = 143/301 (47%), Gaps = 15/301 (4%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +N+ L+ F+ V + SF A E++ LSQSAV+ +++LE G +L +RTTR V T Sbjct: 3 INFDFGDLEAFLAVMETASFHLAAEQLHLSQSAVTRRIQKLEQVLGSKLFERTTRAVKPT 62 Query: 61 DAGQQLALRLERLLDELNST---LRDTG-RMGQQLSGKVRVAASQTISAHLIPQCIAESH 116 A ++L R E +LD T +RD Q V +A T+ A L ++ Sbjct: 63 LAAKRLQSRAEEMLDNAEETTLAMRDESVAFAHQKGAVVTIAMIPTLIAPLFLPGLSSMR 122 Query: 117 RRYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFF-----LLC 171 + + L D V E++ G+ DFGI +G L+ EP+F L Sbjct: 123 QADETARIRLMDLSANDVAEAVSSGEADFGIC----SIGSLEANTHF-EPWFDDEIVLAI 177 Query: 172 HRDSALAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFP 231 + LA +D V W L L+L +G+R LID A+A+ I A E+G T Sbjct: 178 PIEHQLAAQDNVSWPDLLNEDLILPARGTGNRLLIDDAMAKGRISAQWTYEVGRSTTAME 237 Query: 232 MVAAGIGISILPALALPLPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 MV+ G+GI++LP A L K++ PVV R + L+ R S + ++ D +R Sbjct: 238 MVSGGVGIALLPRSAATSTFAQGLRFKKLPKPVVTRPIGLLTRMGVSDTPVVSSVKDSLR 297 Query: 291 D 291 + Sbjct: 298 E 298 >UniRef50_A5MZU7 Predicted transcriptional regulator n=3 Tax=Clostridium RepID=A5MZU7_CLOK5 Length = 289 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/295 (26%), Positives = 153/295 (51%), Gaps = 16/295 (5%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +L+ +FV V + + ++A E++ +SQSAVS + ELE H GVRL +R +R++ +T AG Sbjct: 2 TLRHFNIFVVVCDKMNMTKAAEQLFISQSAVSQVISELEGHYGVRLFERLSRKLYITQAG 61 Query: 64 QQLALRLERLLDELNSTL-RDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 ++L L R + +LN L D +G+ +G +R+ AS TI A+++P+ I++ + + Sbjct: 62 EKL-LSYARYIIKLNMELENDMKTLGE--NGSIRIGASVTIGAYVLPKLISQFQKVNSET 118 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLC---HRDSALAV 179 +++ + V + + Q ++D +V D+ + + L+C HR + L Sbjct: 119 DIKVYEENTEKVEKMLLQDEIDIALVEGETTHTDIINVPFMEDELVLICGSGHRFAKLTC 178 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 + P++ L+ K ++++ SG+R + + N ++ I + T+ V+ G+GI Sbjct: 179 IE--PYE-LEKEKFIIRERGSGTRRTFEDKMKENHLKWQISWTCNNTDTIKIAVSEGLGI 235 Query: 240 SILPALA----LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 S++ + L L + VK I +RQ ++ KN+ L+ + D +R Sbjct: 236 SVISRCSVINELVLGTLCEIPVKEIK--FKRQFKIIYHKNKYLTEIMKHFIDFIR 288 >UniRef50_D1BNW2 Transcriptional regulator, LysR family n=4 Tax=Veillonellaceae RepID=D1BNW2_VEIPT Length = 307 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 84/297 (28%), Positives = 139/297 (46%), Gaps = 13/297 (4%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 LK FV VA +KSFS+A + +SQSA+S ++K LE+ GV L R + V LTD G Sbjct: 3 FHHLKYFVEVADQKSFSKAARNLHISQSAISRTIKALEDELGVVLFMRNAKSVELTDGGT 62 Query: 65 QL---ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 A R+ + + L + + R+ Q G +R+ A + Q + E + YP Sbjct: 63 IFLTHAKRVVFMFEHLKTDFENEFRLEQ---GSIRIGIPPITDAPIFAQLLGEFKKVYPQ 119 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVI-DPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ L+++ + V S+++G +D GI+ P P + + + S+P ++ + S LA E Sbjct: 120 IELELYEQGSKKVEISVQEGLIDIGIICTKPNP-KEFESFYLTSDPLSVIIPKSSPLAKE 178 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + + L VL I A G Q +IV E + V+A + I+ Sbjct: 179 KEIRLEMLADESFVLHKDDFNLHDEIIKACKHTGFQPHIVFETSQRDLMLQTVSANLAIA 238 Query: 241 ILPALALP-----LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 +LP+ P GS +VV+ + P + L ++ +K LS A+ D V + Sbjct: 239 LLPSRLCPEVGENTEVGSKVVVRPLVPEIIHTLYVIWKKGHYLSHASRLWLDFVNSK 295 >UniRef50_Q97DV9 Transcriptional regulator, LysR family n=1 Tax=Clostridium acetobutylicum RepID=Q97DV9_CLOAB Length = 312 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/282 (25%), Positives = 143/282 (50%), Gaps = 7/282 (2%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 +Q + T+A+EKS SRA ER+ +SQ ++S + LEN GV+L DRT+ + LT AG+ Sbjct: 3 FRQFEYVKTIAEEKSISRAAERLYISQPSLSQYIIRLENSLGVKLFDRTSATITLTFAGE 62 Query: 65 QL---ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 + A + L ++L L D + + G+V + +++P I + ++ YP+ Sbjct: 63 KYIETARNIINLNNQLTKELNDIANLSK---GRVIIGVPSQAGRYILPLVIPKFYKEYPN 119 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSAL-AVE 180 I+ ++ + + + + +G +D I+ P + E+I++E FL+ + + +V+ Sbjct: 120 IEIIVEENIVSELEKMLLEGKIDIAILTLPVQHEKITYESIMNERIFLIAPKKHPICSVD 179 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + + ++ K +L R ++D +R G + NI+ EI + + M ++G+G + Sbjct: 180 GRISFNFIRNEKFILLKKGQRIRLIVDDIFSRIGAKPNIILEITNLDAAYRMASSGMGFT 239 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAA 282 I+P L L + I +E L++ RK L+ A+ Sbjct: 240 IVPENVLYLLNTNGKENDFIIDSLEHTLVVAYRKGEYLTRAS 281 >UniRef50_Q2KXT5 LysR-family transcriptional regulator n=4 Tax=Bordetella RepID=Q2KXT5_BORA1 Length = 336 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 96/297 (32%), Positives = 148/297 (49%), Gaps = 8/297 (2%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 + +LK L FV VAQE SF+ A +R+ +QS+V+ +++LE+ G L +RT+R V+LT Sbjct: 7 HVTLKHLNAFVAVAQESSFTHAAKRLFQTQSSVTTLIRQLESALGAALFERTSRRVLLTP 66 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 G R+ RLL + + + D R G G+V VAA+ + + +I A YP Sbjct: 67 LGLDFLPRVLRLLADFDGAIDDAVRYGSLQRGRVSVAAAPSAISEIIAPAAAGYAANYPG 126 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSA---LA 178 I+ L D + + GDVDFG+ L +L + F +L D Sbjct: 127 IRLYLRDDNSGSIQRLVSAGDVDFGLTSPWTDAPRLDFAPLLEDRFGVLYRSDDPGIRPG 186 Query: 179 VEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 + +V W+ L G KLV +G L+ A A+ E T +V AG+G Sbjct: 187 KDGHVRWRMLAGHKLVGVADETGIMALLRARADLPIEAASPFYEASSTTTQAALVQAGLG 246 Query: 239 ISILPALA---LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 +++LPALA + LP S ++ P V R L +VR ++R+LS AA AL + +R+ Sbjct: 247 VALLPALAAHRVMLPGLSYALLSH--PNVTRALCIVRDRDRALSPAAAALIEALRNH 301 >UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F961_ACIC5 Length = 288 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 72/252 (28%), Positives = 125/252 (49%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 QL+ +A+ +FSRA ER ++Q ++S V +LE GV+L DR R + +T+AG+ Sbjct: 3 FHQLRYVCAIAETGNFSRAAERCQVAQPSLSQQVLKLEEDLGVKLFDRLGRSLRITEAGR 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 +L ++ + + + G V V TI+ +L+P+ A R+YP+ + Sbjct: 63 AFLPHARSILHQMEAARASVAGKSKDVRGSVAVGVIPTIAPYLMPRYTAAFARKYPEARL 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 + + ++ES+R +D ++ P DL+C +L+EP F + +D A + Sbjct: 123 RIVEETTPVLVESLRNLSIDLAVLALPLRHKDLECIPLLTEPMFAVLPKDHPRASAQTLS 182 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPA 244 + L+G V+ R L AA + + I E G +LF MVAAG+G+S++P Sbjct: 183 LKDLRGETFVMLRDGHCFRDLSLAACSHARVTPRIAFESGQFRSLFGMVAAGMGVSLVPQ 242 Query: 245 LALPLPEGSPLV 256 +A+ G V Sbjct: 243 MAMDRSAGCAYV 254 >UniRef50_C6DBU7 Transcriptional regulator, LysR family n=4 Tax=Pectobacterium RepID=C6DBU7_PECCP Length = 299 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 79/299 (26%), Positives = 136/299 (45%), Gaps = 5/299 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN S+KQL+ F+ + + +F+RA ++I LSQ A S + LE G RL DR TR+V L Sbjct: 1 MNLSIKQLRAFIALTETDNFTRAAQKINLSQPAFSSLIAGLEEEVGYRLFDRDTRKVQLN 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G RL+ + + + GK+ +A +++ +PQ +A+ HR YP Sbjct: 61 ADGLHFIDIARRLVQTHDDAVGEIKSYATGYKGKIVLAVLPSMAVEWLPQVLAQYHRAYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVI-DPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 I+ L D ++++ G D + P P G + ++ F+L+C LA Sbjct: 121 KIKVELLDTQWDRCLKAVLDGRADLALTAGQPSP-GTFSSRMLFADSFYLICQNSHPLAQ 179 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 D V + V + R D + G N V E+ T+ +VAA G+ Sbjct: 180 RDSVDVTDVAQYPFVGFCKGTSIRQYTDQLIEPEGF--NYVLEVRQLTTMMGLVAANYGV 237 Query: 240 SILPALALPLPEGSPLVVKRITPV-VERQLMLVRRKNRSLSTAAEALWDVVRDQGNALM 297 SI+ L L + + + + ++R + LV + R LS A+ +D + ++ + + Sbjct: 238 SIVTGLTLFQFQHKDIAIIPFRDLSLQRGIYLVTDRERQLSVCAKEFYDFLLERAESFV 296 >UniRef50_Q15VE5 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15VE5_PSEA6 Length = 297 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 76/299 (25%), Positives = 146/299 (48%), Gaps = 7/299 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN S +QL+ F+ VAQ +F+ A +++ LSQ A+S ++K++E G L RTTR+V L+ Sbjct: 1 MNVSYRQLQAFIQVAQSATFAEAAQKMFLSQPALSSAIKKMEEQVGGGLFSRTTRKVQLS 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 GQ RL+++ D ++ GK+ +AA + + +P + ++P Sbjct: 61 PEGQDFLPVAIRLMNDWQDAFGDLQQVFSMGRGKLSIAAMPSFAVGHLPAILGAFQSQFP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +++ + D + V+ ++ + V G + + L + ++ F + + L+ + Sbjct: 121 NVKVAVADIVMEQVINAVSEERVALGFTFETEQLDGLLFHPMFTDEFIAVLPKLHPLSQQ 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V W AL + + + S R +D ++ N+V E ATL V G+G+S Sbjct: 181 SSVTWNALAQSPFIAMNRGSAIRRWVDNHYEALELKVNMVAEASQLATLGQFVEHGLGVS 240 Query: 241 ILPALALPLPEGSPLVVKRITPV----VERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 I+P L + L R P+ + +++ ++++ ++S +A+ALWD V Q A Sbjct: 241 IVPGLCQQQMQRLGL---RCLPIEGDRLSKRVGMIKKVQGNMSVSAQALWDWVIKQSLA 296 >UniRef50_P39592 Uncharacterized HTH-type transcriptional regulator ywbI n=9 Tax=Bacillales RepID=YWBI_BACSU Length = 301 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 78/298 (26%), Positives = 138/298 (46%), Gaps = 13/298 (4%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 ++ L F+ VA+ KSF++A + + +SQ +S +K LE G+ L R R+V LTDAG Sbjct: 3 IRHLTYFLEVARLKSFTKASQSLYVSQPTISKMIKNLEEELGIELFYRNGRQVELTDAGH 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 + ++ + ++ + + + + G VR+ I + P+ + + YP++ F Sbjct: 63 SMYVQAQEIIKSFQNLTSELNDIMEVKKGHVRIGLPPMIGSGFFPRVLGDFRENYPNVTF 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 L + V E + G +D G+V+ P I+ E L+ H LA E Sbjct: 123 QLVEDGSIKVQEGVGDGSLDIGVVVLPANEDIFHSFTIVKETLMLVVHPSHRLADEKECQ 182 Query: 185 WQALQGAKLVL--QDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L+ + +D+ +R + + A G + +I+ E + MV+A +GI +L Sbjct: 183 LRELKDEPFIFFREDFVLHNRIMTECIKA--GFRPHIIYETSQWDFISEMVSANLGIGLL 240 Query: 243 PA-LALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEA--------LWDVVRD 291 P + L V+ + PV+ L ++ RK+R LS AA A LWD +D Sbjct: 241 PERICRGLDPEKVKVIPLVDPVIPWHLAIIWRKDRYLSFAARAWLEHTKSYLWDPKKD 298 >UniRef50_A3IAK3 Transcriptional regulators, LysR family protein n=1 Tax=Bacillus sp. B14905 RepID=A3IAK3_9BACI Length = 304 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 78/293 (26%), Positives = 143/293 (48%), Gaps = 9/293 (3%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +L Q+++FV V +F+RAGE + ++QS +SH++ LE+ G+ LL+R + LTD+G Sbjct: 13 NLLQIEIFVKVVDMGNFTRAGEILAMTQSGISHNISSLESELGITLLNRGRNGISLTDSG 72 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 +++ + +L E S ++T + +GK+ + + + S+ L+P I+ + I+ Sbjct: 73 ERIIKHMRNILTEAESIKQETASILGIQNGKINIGSFSSFSSKLLPTIISRFRGEFKGIE 132 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 +D + + +G VD G P+ L+ IL++ L LA+ V Sbjct: 133 INFYDGSYDQITRWVEEGKVDIGFTSLSNPLDHLKTIPILNDRLVLTLPIHHHLAINGQV 192 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 + LQG ++ G + L + NI + T+ MV G+GI+I+P Sbjct: 193 KVEDLQGEAFIMPKL--GCEVSVMKFLKEQEVSPNIQFNVEDNQTIIAMVREGLGITIMP 250 Query: 244 ALALPLP-EGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEAL----WDVVRD 291 LALP +G+ +VK + P R++ ++ R + A +A D V+D Sbjct: 251 ELALPYNLQGT--IVKPLLPEPSREISIITRSKKQSLPAVKAFIKTTMDCVKD 301 >UniRef50_C9YVN6 Probable LysR-family transcriptional regulator n=3 Tax=Streptomyces RepID=C9YVN6_STRSW Length = 308 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 86/265 (32%), Positives = 138/265 (52%), Gaps = 3/265 (1%) Query: 29 LSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLALRL-ERLLDELNSTLRDTGRM 87 +SQS++S +V +LE GV+LL+R TR V LT AG + ALR+ E+++ + +R+ R Sbjct: 30 VSQSSLSRAVADLERQLGVQLLERDTRNVQLTAAGVE-ALRVAEQIVTAHRAGMRELRRY 88 Query: 88 GQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLHDRPQQWVMESIRQGDVDFGI 147 SG V VA +++A L+P+ I+ R P + L D ++ V+E + GD DF + Sbjct: 89 LLGESGAVAVATLPSVAAVLLPRVISAFRERRPQVAVRLLDGLERSVLERVLSGDADFAL 148 Query: 148 VIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQALQGAKLVLQDYASGSRPLID 207 P L+ ++ + F + + LA + W+ L G + S R L D Sbjct: 149 TTVGNPPEQLEHRPLVRDRFVAVLPQGHPLADRQEITWEELAGQPFLAVGRDSSVRRLTD 208 Query: 208 AALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALALPLPEGSPLVVKR-ITPVVER 266 AA A+ A E G AT+ +V AG+G+S +PAL LPL P+V + + PVV+R Sbjct: 209 AAFAQIDAHAAPAAEAGSVATVGGLVTAGLGVSAMPALVLPLMGAGPVVCRPLVDPVVDR 268 Query: 267 QLMLVRRKNRSLSTAAEALWDVVRD 291 +L + R R+L E + + + Sbjct: 269 RLDIALRARRTLPAVTERFLETLEE 293 >UniRef50_Q12FR1 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12FR1_POLSJ Length = 289 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 84/294 (28%), Positives = 145/294 (49%), Gaps = 8/294 (2%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +L QL+V +T+ + +SFSRA R+G +QSAVSH+++ LE GV+L R V +TDAG Sbjct: 2 TLAQLEVLITLDECRSFSRAAMRLGTTQSAVSHALRALETQFGVKLAQRDASGVAMTDAG 61 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAA-SQTISAHLIPQCIAESHRRYPDI 122 ++L LR + + ++ G + +G +R+ + T + +L+P +A +R+P Sbjct: 62 ERLLLRAREMTALAATMTQELGDARELKTGTLRIGSFGPTSTVNLLPPLLAAFKKRHPGA 121 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 Q + + + V + + Q V+ G V+ P + + ++ + F + LA Sbjct: 122 QVRIEEESDEVVDDWLLQKRVELGFVVVPDE--RFEVQPLVQDEFVAILPTGHPLAKHKA 179 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 VP AL G VL + +G P+I L +N ++ ++ V G+ +S+ Sbjct: 180 VPISALTGLDFVLTE--AGCGPVIVPILQKNIALPKVLYHFTQVISILQFVQRGLAVSVA 237 Query: 243 PALALP-LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 LALP P+G +V + + P R + L LS A A WD+ + Q A Sbjct: 238 ARLALPDAPKG--VVYRPLLPAQPRTVGLACLDAARLSPLARAFWDLAKAQTKA 289 >UniRef50_A7GJI5 Transcriptional regulator, LysR family n=11 Tax=Clostridium RepID=A7GJI5_CLOBL Length = 301 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 75/292 (25%), Positives = 147/292 (50%), Gaps = 7/292 (2%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 KQ++ F++VA+ KSFS+A + LSQ A+S + LE V+L DRT++EV+LT AG Sbjct: 3 FKQIEAFISVAKYKSFSKAANSVFLSQPAISSHIATLEKELSVQLFDRTSKEVLLTPAGN 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 +L+ + + + GK+ + AS T +IP + ++PD+ F Sbjct: 63 SFLKYALEILNARDRAVCCLSNFNNTVCGKLTLTASSTPCNTIIPDLVKGFENKFPDVAF 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 + ++ V++++ + + GI+ D ++ ++ + L+ + +L + D + Sbjct: 123 NVLEQSSGEVLDNLLNFNSEIGIIGDLISDDKIKTYKLVEDNLVLI--SNPSLNIPDEID 180 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQ---EIGHPATLFPMVAAGIGISI 241 ++ K VL+ +S +R ++ L ++GI + ++ E+ + T+F V G+GIS+ Sbjct: 181 AGSILKYKFVLRKKSSATRKTFESNLKKSGIDPSTLEVCCEVNNLDTIFQFVKTGVGISV 240 Query: 242 LPALALPLPEGSPLVVK-RITPV-VERQLMLVRRKNRSLSTAAEALWDVVRD 291 + G + K +IT + ++R L L R+L+ A+A +D D Sbjct: 241 ISEKVYNGYLGLNSIKKSKITNLNLKRSLYLAICSKRTLTPTAKAFFDFCLD 292 >UniRef50_A6DK62 Hydrogen peroxide-inducible genes activator n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DK62_9BACT Length = 293 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 77/289 (26%), Positives = 143/289 (49%), Gaps = 3/289 (1%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 + K L+ F +A+EK F +A + G+SQ A+S +K++E GV L +R+ R+VVL+ G Sbjct: 2 TFKDLEYFAILAKEKHFGQASVQAGVSQPALSIQIKKMEAELGVCLFERSNRQVVLSPEG 61 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 + L R +++L ++ + G++ + A T++ +L PQ I E H+ YP+++ Sbjct: 62 EVLLERAQKILRQVEDFQTCARQFKDPYQGQLILGAFPTLAPYLFPQIIDELHQSYPEMK 121 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 F + + + +++ +++G VD + P L E I SE F + + + Sbjct: 122 FFIKEEKTETLLKMLKEGKVDAAFIALPHEDSTLDSEFIFSEEFLFATPANYPEDFPNEL 181 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 Q+L+G +L+L D R + N + N TL MVAAG+G++++P Sbjct: 182 SLQSLKGRELMLLDEGHCFRDQALELCSVNQARENFDFRASSLETLRHMVAAGLGVTLIP 241 Query: 244 ALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 A E + + + + P +R++ L RK + + D +RD Sbjct: 242 KCA--QDESAKIKYMKFSDPSPKREIALFWRKTSPKAEIFREIADDLRD 288 >UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=Bacillales RepID=C6D4H5_PAESJ Length = 303 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 69/245 (28%), Positives = 129/245 (52%), Gaps = 3/245 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M + QL +F TVA+ SFS A + + ++Q AV+ V+ LE++ G +LL R+T+ + LT Sbjct: 1 MALNFHQLHIFYTVAERGSFSAAAQSLHMTQPAVTMQVQSLEDYFGTKLLQRSTKRIDLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+ L R ++ + T + +QL G++++ AS TI +++P+ + + +P Sbjct: 61 EAGKALMPYARRSIELIRDTDQAMSAFTKQLKGRLQLGASLTIGEYILPRLLGPFGQTFP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +I + ++E I + FG++ P D+Q EA++S+ L+ +D L+ Sbjct: 121 EISISMKVMNTAQIIEEIINHQLTFGLIEAPVNHPDMQMEAVMSDELKLIVPKDHPLSKR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQA---NIVQEIGHPATLFPMVAAGI 237 V + V+++ SG+R +++ L R I IV E+G + V AG+ Sbjct: 181 QKVLLDEVADYPFVVREQGSGTRLVMEEQLKRKKIDPADLKIVMELGSTGAVKSAVEAGL 240 Query: 238 GISIL 242 G+S + Sbjct: 241 GVSFV 245 >UniRef50_A6WDF3 Transcriptional regulator, LysR family n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WDF3_KINRD Length = 306 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 74/258 (28%), Positives = 123/258 (47%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+Q++ V +A E+ F+RA G+SQS +S +++ LE+ G L DR+ R V TDAG Sbjct: 3 LRQMQYVVALADERQFTRAAALSGVSQSGLSAAIRTLEDELGATLFDRSPRRVEPTDAGL 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 L LL + + + ++LSG +RV A Q + + + HRR+P ++ Sbjct: 63 ALLPFARTLLAQATAARDAVVQATRRLSGTLRVGAEQCLGVVDVSTLLERFHRRFPQVEI 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 ++ +R+G++D V +G L + EP LL + LA + P Sbjct: 123 HFEQAGSHDLLGRLREGELDLVFVATTEHLGALPASELGREPLVLLTPPEHPLAGRPHAP 182 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPA 244 W L + + G RP+ DAA A +G+ + +G L +V G+GI+I+P Sbjct: 183 WAELAAHPFIDFVPSWGVRPITDAACAAHGVHRRVRFSVGDVHALLDLVGRGLGIAIVPR 242 Query: 245 LALPLPEGSPLVVKRITP 262 P+ + L V + P Sbjct: 243 HVAAKPQAARLAVVPMPP 260 >UniRef50_C3BJ72 YwqM (Probable transcriptional regulator YwqM) n=4 Tax=Bacillus RepID=C3BJ72_9BACI Length = 298 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 67/244 (27%), Positives = 127/244 (52%), Gaps = 4/244 (1%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+ LK F+ VA+ F+RAGE++G +QS +++ ++ LE G L DR ++V+LTD G+ Sbjct: 3 LRHLKTFIIVAESGGFTRAGEQLGYTQSTITNHIRSLEEEIGNPLFDRLGKKVILTDVGE 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 + ++L+ N L ++ +M + SG +R+ A++++ + +P + E R+YP + Sbjct: 63 HMLSYAHKILELSNEAL-ESSQMNGKFSGTIRIGANESLMIYRLPAVLYEFKRKYPQVHI 121 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVG-DLQCEAILSEPFFLLCHRDSALAVEDYV 183 +L Q + ++ G DF + P +G D+ +++ E L+ L + V Sbjct: 122 ILQPSESQELHNELKSGKFDFALFTHPEQLGTDIVTHSLVQEKIVLIAPPKHPLTKKVSV 181 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 L+G L+L + S R L++ + +GI + + A + V G+GIS LP Sbjct: 182 SPADLEGEMLLLTEPGS-YRDLLERRIKEDGINCSHIHFWSIEA-IKQTVMCGLGISYLP 239 Query: 244 ALAL 247 + + Sbjct: 240 FITV 243 >UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae RepID=A9WIA6_CHLAA Length = 307 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 94/298 (31%), Positives = 148/298 (49%), Gaps = 19/298 (6%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 + +L L+++V V ++ SF++A E + +SQSAVS +V+ELE G LL+R R V T Sbjct: 15 VTLNLHLLRIYVAVLEQGSFTKAAEVLTMSQSAVSRAVQELERQLGTTLLERRARGVAPT 74 Query: 61 DAGQQL---ALRL---ERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAE 114 AG L A R+ ERL E + LR R G++ + AS TI +L+P + Sbjct: 75 MAGTILGEHARRIFTHERLAIEALNELRGLQR------GRLAIGASSTIGIYLLPPLLGN 128 Query: 115 SHRRYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVG---DLQCEAILSEPFFLLC 171 HRRYP I+ L Q ++E + +D V GPV DLQ S+ ++ Sbjct: 129 YHRRYPGIELFLDIGNTQQIIERLLSYQIDVAYV--EGPVAANEDLQVVPWRSDEMVVIA 186 Query: 172 HRDSALAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFP 231 D L + LQ A ++++ SG+R +++ ALA + + V E+G + Sbjct: 187 SPDHPLTRRVTLDCSDLQDAPFIMREPGSGTRKVMEQALAAHNVTVRPVMELGSTEAVKQ 246 Query: 232 MVAAGIGISILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWD 287 V+AG+G+S++ + L G V+ ++RQL VR +R S A EA + Sbjct: 247 AVSAGLGLSMVSRFTIQSELIAGKLRVLNIPGLNIQRQLSRVRLHDRPQSLALEAWFK 304 >UniRef50_A6X7A0 Transcriptional regulator, LysR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X7A0_OCHA4 Length = 308 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 75/292 (25%), Positives = 138/292 (47%), Gaps = 1/292 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M +L+Q++ F V + +FSRA ER+ +Q+ +SH++++LE RL DRTTR V LT Sbjct: 1 MRPTLRQIECFQAVVELGNFSRAAERVRTTQANLSHTIRDLETVLDARLFDRTTRRVSLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 DAG+ A L E++ +G+ G+V +AA + ++P + +P Sbjct: 61 DAGRAFAEGALAGLAEIDRAAEVVRDLGKLRRGQVSIAAPPLLCTTVLPHLVRRVADEHP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ + D + V+E +R G D G+ G D++ + L + + A Sbjct: 121 NLVIKIEDVGPEIVIEQVRNGRCDLGVGTFSGEDSDVESQMALRDQLMIFVSPHHDFAGH 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + V W L ++ S R L + + + E+ ++ +V GI+ Sbjct: 181 EQVRWAELDDQPIITLTQKSNIRLLTEIGFEQAKLALRPHMEVNQIHSVLSLVEVNAGIA 240 Query: 241 ILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 +LPA A G +V + +T P + R++ L+ ++R S A A+ ++R+ Sbjct: 241 VLPAYAFTALRGRGIVARPLTDPAIVREVRLITPRDREQSAATVAVRSILRN 292 >UniRef50_B4ETA7 LysR-family transciptional regulator n=37 Tax=Enterobacteriaceae RepID=B4ETA7_PROMH Length = 296 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 84/287 (29%), Positives = 145/287 (50%), Gaps = 6/287 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M +L+QL+VF V + S ++A +++ LSQSAVS S+ +LEN GV+L DR + +V Sbjct: 1 MRITLRQLEVFTEVLKSGSTTQASQQLALSQSAVSASLTDLENQLGVQLFDRVGKRLVTN 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 + G+ L R LL+ + ++ Q +G +R+AAS TI +++PQ + HR YP Sbjct: 61 EHGRLLYPRALSLLERAT----EVEQLFQAGNGALRIAASTTIGNYILPQMLGNFHRNYP 116 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 DI + + V++S+ + VD G++ +L + L + + C + LA Sbjct: 117 DIPLEMSIGNTEEVVKSVSEFRVDLGLIEGACQSSELISQKWLLDEMVIFCSPEHPLAKA 176 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V LQ A +L++ SG+R +++ L + I E+G+ + V +GIS Sbjct: 177 KTVTLADLQSAPWILRENGSGTRDVLNHLLFASLPGYRIEMELGNSEAIKHAVMYEMGIS 236 Query: 241 ILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEAL 285 L + + GS +K ++R L LV + + +S A + L Sbjct: 237 CLSRRVIQDQIESGSLKEIKVEGLKLQRTLYLVYHRQKHVSDALKKL 283 >UniRef50_C0EFB5 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EFB5_9CLOT Length = 289 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 77/277 (27%), Positives = 131/277 (47%), Gaps = 4/277 (1%) Query: 20 FSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLALRLERLLDELNS 79 F++A + +G +QS++S + LEN G++LL R+ V LT G +L +ER + + S Sbjct: 16 FTKAADALGYTQSSISQMIASLENELGIKLLTRSRHGVKLTIEGTELFPFIERSIYQYRS 75 Query: 80 TLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLHDRPQQWVMESIR 139 + +G +RV +++ H +PQ I YP++QF+ H + E I Sbjct: 76 MQEKANEIKGIETGVIRVGTVSSVTCHWMPQLINGFKEEYPNVQFLFHQGDYTLIPEWIA 135 Query: 140 QGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQALQGAKLVLQDYA 199 G +DFG I+P +L+ + + S+ + ++ LA + + Q + +L + Sbjct: 136 SGQIDFGF-INPLADTNLKTKTVKSDEMLAVLPKNHPLAKKKSIQLQDIATEPYILLEEG 194 Query: 200 SGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALALPLPEGSPLVVKR 259 S P+ AA GIQ NI I + MV AG+G+SIL L L +V Sbjct: 195 HYSEPM--AAFEAAGIQPNIQYTIHDDYAIMMMVEAGLGVSILAELIL-RRTNYDIVCLP 251 Query: 260 ITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 I P + R L + + SL A++ D + + + L Sbjct: 252 IDPPITRTLAVGYKDKDSLPIASKYFIDYLMEHKDEL 288 >UniRef50_B9TDR3 HTH-type transcriptional regulator xapR, putative n=1 Tax=Ricinus communis RepID=B9TDR3_RICCO Length = 301 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 81/255 (31%), Positives = 128/255 (50%), Gaps = 17/255 (6%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ LKQLK F+ VA+EKSFSRA ER+ +SQ +S + +LE+ GV+L RTTR LT Sbjct: 1 MSIDLKQLKYFLAVAEEKSFSRAAERLHISQPPLSQQIMKLESELGVKLFARTTRTFELT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG+ L LL + T+ ++ + G++RV + IP + E ++P Sbjct: 61 VAGKALMSEAADLLARMRMTIDTIRQIDRGEVGRLRVGIVGSAMWGPIPSLLEEFQTKFP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGD-LQCEAILSEPFFLLCHR-DSALA 178 + + LH+ E++R VD G +P D L+ + + E LC R D +A Sbjct: 121 RVTWTLHEMGPTLQYEALRAKQVDVGFWREPRIDDDVLKNDNLRQE----LCFREDVCVA 176 Query: 179 VEDYVPWQALQGAKLV----------LQDYASGSRPLIDAALARNGIQANIVQEIGHPAT 228 + ++ P + +L+ D +S R L+ + + G Q I QE P T Sbjct: 177 INEHHPLAKQEAIELMDIAEEPMLTLALDKSSFPRYLMQCCV-QAGFQPTIAQEATEPQT 235 Query: 229 LFPMVAAGIGISILP 243 L MV AG+G++++P Sbjct: 236 LLAMVGAGLGVALMP 250 >UniRef50_C4V4C8 Transcriptional regulator n=2 Tax=Selenomonas RepID=C4V4C8_9FIRM Length = 298 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 76/294 (25%), Positives = 139/294 (47%), Gaps = 16/294 (5%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+QL+ F ++ K+ +RA ER+ +SQ ++ ++K+LE+ G++L DR+ +++ LT G Sbjct: 3 LRQLEYFQMASRLKNITRAAERLRVSQPNITVAIKKLESELGIQLFDRSQKQLSLTPEGA 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 R+E L + + + Q G +++ + A+L P+ + RRY + Sbjct: 63 VFLERVEVALRNIQDAVLEVNDYKQLQKGTIKIGIPPMMGAYLFPKIFSSFQRRYSHLDV 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 LH+ + E + + ++DFGI+I P +LQ + DS LA V Sbjct: 123 YLHEEGSVAIREQLERDELDFGIIIIPESSPNLQLLPMTRSQIVCCVPEDSELAERKAVT 182 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPA 244 Q ++G L++ S R + + G+ NIV E T+ +VA+G+G + L Sbjct: 183 LQDIEGRNLIMLKEGSFLRQTMLQKMKAAGVSPNIVLESNQVVTIMGLVASGVGDAFLLD 242 Query: 245 LAL-------PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 + LP +P+ V + L +++R +S AA++ D RD Sbjct: 243 MIAREAHGIRTLPLAAPVYV---------DVGLAWKRDRYISRAAQSFIDFARD 287 >UniRef50_Q2SD63 Transcriptional regulator n=2 Tax=Oceanospirillales RepID=Q2SD63_HAHCH Length = 320 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 83/294 (28%), Positives = 154/294 (52%), Gaps = 6/294 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN SL+QL+VF A+ + A E LSQSA S S++E+E G +L + RE+ L+ Sbjct: 18 MNVSLRQLRVFEATARLGRLTLAAEEQCLSQSAASQSIREMEKALGYNVLIKVGRELELS 77 Query: 61 DAGQQLALRLERLLDELNS-TLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRY 119 DAG+++ R+ R+L ++ L D ++++G +RVAAS TI+++L+P +AE +RY Sbjct: 78 DAGRRVLPRVRRILSLVDGLALPDI----EKVAGPLRVAASVTIASYLLPSLLAEFVKRY 133 Query: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 P+++ + + V+ + +G G++ P L L++ + C L Sbjct: 134 PEVEPDVQIHNTEAVLALLEKGRAHIGLIEGPALHPTLHIAPWLADRLAIFCAAGHPLTR 193 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 + +AL+ ++++ SG+R + DAA+ G++ I + + V AG+G+ Sbjct: 194 VGNIGAEALEQFPWIVRETGSGTRAVFDAAMQAMGVRPRISFALSRQEAIKQSVRAGLGV 253 Query: 240 SILPALALPLPEGSPLVVKRITPV-VERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 L L++ L+V+ TP+ + RQ V + ST +A D+++++ Sbjct: 254 GCLSRLSIVDEVPERLLVELDTPLNLTRQFSWVCAPDNRESTVVKAFIDLLQER 307 >UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Bacillales RepID=C6IV95_9BACL Length = 305 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 79/284 (27%), Positives = 135/284 (47%), Gaps = 4/284 (1%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+QL+ FV VA+++ ++A E + ++QSAVS + +LE GV L + R + LT GQ Sbjct: 3 LRQLQYFVKVARKEHVTQAAEELHVAQSAVSRQIHQLEQELGVNLFMQKGRNLHLTAVGQ 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 R+E +L +L+ + + G++R+ ++ H+IP +AE + YP+++F Sbjct: 63 LFCSRVEMILKDLDRAVSEVHEFLDPEQGEIRLGFPNSLGIHMIPSVVAEFRKLYPNVKF 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQC--EAILSEPFFLLCHRDSALAVEDY 182 ++ + G+VD I P P Q +L+E + LA E Sbjct: 123 RFRQGTYPTLIRDVVSGEVDLAF-ISPFPENHDQVTGNVVLTEDLVAILPPGHPLAGEQS 181 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L+ K +L RP++ A G I E T+ +VAAG+G+S+L Sbjct: 182 IKLSQLKDEKFILFSKGYSLRPIVWHACLEAGFTPKIAFEGEETDTIRGLVAAGMGVSLL 241 Query: 243 PALALPLPEG-SPLVVKRITPVVERQLMLVRRKNRSLSTAAEAL 285 P +AL P+ V+ P V R + L+ R + L A++ Sbjct: 242 PEMALFQSFTLQPIRVRISEPKVTRTIGLIHRVDEKLPLVAQSF 285 >UniRef50_C7MU92 Transcriptional regulator n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MU92_SACVD Length = 309 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 81/294 (27%), Positives = 139/294 (47%), Gaps = 9/294 (3%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 ++ ++ L+ VA ++ A ++ ++QS+VS +V E+E GVRL +RTTR V T Sbjct: 3 IDIGIRHLRAVAAVADAGGYTGAARKLHVAQSSVSRTVLEVEQRLGVRLFERTTRRVHPT 62 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+Q RLL E ++ + G V +AA +++A ++P +A+ P Sbjct: 63 VDGEQFLTIARRLLAEFDTAMNHFEGYLSGTRGSVSIAALPSLAATMLPHVLAKFRTARP 122 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 D+ + D Q V++ + +G D + + L I + F + A Sbjct: 123 DVAVTVLDGLSQDVLDHVARGSADMAVTVAATVPPTLHARPIAVDRFVCVFPPGHRFAEH 182 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W L G + V D S R +D L+R+G++ V + + + + A+G+G+S Sbjct: 183 SEITWNDLDGEEFVAFDPTSSIRAYVDRILSRHGVRLGSVTQARNVGAVAGLTASGLGVS 242 Query: 241 ILPALALPLP-----EGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 +P L LP+ + PLV PVVER + LV R LS A AL +++ Sbjct: 243 AVPGLVLPMMTFAEIDSRPLV----EPVVERDICLVHDPTRPLSRTALALMELL 292 >UniRef50_Q2J000 Transcriptional regulator, LysR family n=1 Tax=Rhodopseudomonas palustris HaA2 RepID=Q2J000_RHOP2 Length = 327 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 75/244 (30%), Positives = 127/244 (52%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +LKQ+++F+ VA+ +SF AG+R+ SQS++S +K+LE+ G+ L DRTTR V LT AG Sbjct: 24 TLKQIRMFLAVARHRSFRVAGDRVSASQSSISIQIKQLEDRVGLALFDRTTRVVKLTPAG 83 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 +L ERL + ++ +G++R+ +I+ HL+P+ IAE R P + Sbjct: 84 SELLADFERLAAMADEVRVKCAQLAAGRTGQLRIGVLPSIAEHLLPEVIAEFSRELPGVH 143 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 F + + +Q ++ +++ G D G+ + E + S+ F + LA D + Sbjct: 144 FEIFEAVEQELIAAVKVGRCDLGLTSARMLERGMTFEGLFSDDLFAVMLSSHPLASLDEI 203 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 P AL L+L + + R A GI E+ + AT A G+G+++LP Sbjct: 204 PIAALAERPLILTKWGTSLRLAASQAFEDEGIAIVPAYEVTNMATALGFAAKGLGVALLP 263 Query: 244 ALAL 247 A A+ Sbjct: 264 ASAV 267 >UniRef50_C0BJQ2 Transcriptional regulator, LysR family n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BJQ2_9BACT Length = 303 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 124/248 (50%), Gaps = 6/248 (2%) Query: 1 MNYSL--KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVV 58 M+Y L + L+ F+ VA++ F +A ER+ +SQ +S +KELE+H GV+LL+R +R+V Sbjct: 1 MSYQLEYRHLRYFLAVAEDLHFRKASERLFISQPGLSKQIKELEDHLGVQLLERHSRKVS 60 Query: 59 LTDAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRR 118 LT +G L L+R L+ L + + + + G +++ + H+IP + + ++ Sbjct: 61 LTPSGSYLKEELKRSFQNLDYILEHSKLLDRGMVGNLKLGYVGSAMQHIIPNLLLKFKKQ 120 Query: 119 YPDIQFVLHDRPQQWVMESIRQGDVDFGIV-IDPGPVGDLQCEAILSEPFFLLCHRDSAL 177 +P I F L + Q +E + ++D V ++ P G L+ +L EPF L+ + + Sbjct: 121 HPKILFNLKEMDNQAQVEGLLSNEIDLAFVRLENFPRG-LKANIVLREPFCLVLPENHPI 179 Query: 178 AVEDYVPWQALQGAKLVLQD--YASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAA 235 ++ + +L D Y+ + +G Q I H T++ +V Sbjct: 180 GTHNFKSLAQFKNESFILFDQRYSPSYFYKVMQLFDDSGFQPKISHNTIHSNTIYKLVEN 239 Query: 236 GIGISILP 243 GISI+P Sbjct: 240 YFGISIIP 247 >UniRef50_A9I810 Transcriptional regulator, LysR-family n=5 Tax=Proteobacteria RepID=A9I810_BORPD Length = 329 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 131/249 (52%), Gaps = 8/249 (3%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M + L+ F+ VA+E+ FSRA R+ LSQ +S+++++LE+ G RLL+RT+R V LT Sbjct: 31 MELEPRLLRYFIAVAEERHFSRAAARLHLSQPPLSYAIRQLESTLGTRLLERTSRHVELT 90 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+ L + LL + + R+G L G++R+ ++ +P +A P Sbjct: 91 EAGRVLYREAQALLRQSEAIGTLVQRVGAGLRGRLRIGFVGSMLYRGLPDLLAAMRTALP 150 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIV-IDPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 D++ VL + +E++R+G+ D G + +P P ++Q +++EPF L LA Sbjct: 151 DVEHVLTELNSHEQIEAVRRGEQDLGFIHANPAP-AEVQTLNLVAEPFVLCVPDTHPLAR 209 Query: 180 EDYVPWQALQGAKLVLQDYASGSRP----LIDAALARNGIQANIVQEIGHPATLFPMVAA 235 V QAL +L +A + P + + G I E+ H ++ +V+ Sbjct: 210 RRRVSLQALAHDDFIL--FARAASPSYHETVLSLCVTAGFHPAIRHEVRHWLSVAALVSQ 267 Query: 236 GIGISILPA 244 G+G+SI+PA Sbjct: 268 GLGVSIVPA 276 >UniRef50_Q4ZT12 Regulatory protein, LysR:LysR, substrate-binding n=3 Tax=Pseudomonas RepID=Q4ZT12_PSEU2 Length = 313 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 82/297 (27%), Positives = 145/297 (48%), Gaps = 7/297 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M S++ ++ F++VAQ SFS+A + LS SA++ +++LE+ GV LL+R+ R V LT Sbjct: 17 MKNSIQHIRAFLSVAQTGSFSKAAATLNLSPSALTVQIQQLEDWLGVALLERSPRHVCLT 76 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AGQ L +E+LL +L++ + + G + +AA ++ + ++P + R+P Sbjct: 77 GAGQNALLPMEKLLLDLDNIVSAARDIAASRRGLITIAALPSLCSGVLPTVLKTFRERFP 136 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ L D Q + + + +VDFG+ + P L+ AIL + L D LA Sbjct: 137 GVEVRLRDVVAQRIDTLVMEREVDFGLGVQARPTHGLEFNAILEDRLCLFAPEDHPLAKR 196 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V + +VL S R L++ A + + E + +T+ +V G GI+ Sbjct: 197 CAVRLNEIAVFPIVLTGRESSVRDLVERVFADEQLPLSAGLEANYMSTVLALVRQGQGIT 256 Query: 241 ILPALA-------LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 +LP A +P P VV++I + + R + R+ S A D++R Sbjct: 257 LLPESADDGRGDLSKVPVDHPGVVRQIGLITRSEQTRGRLRERAKSYAKALANDILR 313 >UniRef50_C0CUF5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUF5_9CLOT Length = 302 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 76/298 (25%), Positives = 143/298 (47%), Gaps = 10/298 (3%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ +L+ L++F+TV + S + A R+ +Q +VS +++E+E + GV+L DR ++++ LT Sbjct: 1 MDVTLRHLRIFLTVCEAGSMTGAANRLFTAQPSVSLAIREMEEYYGVKLFDRISKKLFLT 60 Query: 61 DAGQQL---ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHR 117 +AG Q+ A + L DE+ +R+ +SG +RV AS T+ L+P + E R Sbjct: 61 EAGHQVLEYARHIIALFDEMEQEVRNP-----DMSGTLRVGASITVGTFLLPGYVKELTR 115 Query: 118 RYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSAL 177 YP+++ + + + ++D G++ + E+ + +C Sbjct: 116 LYPELRVEARIENSNNIEKCVLSNEIDLGVIEGIAHSRYISSESFHGDRLAFVCPPGHRF 175 Query: 178 AVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGI 237 A + V LQ +L++ S R + D A + + I + + VAAG Sbjct: 176 AGKQDVKLGDLQSESFILREKGSAGREIFDGLAAAHELDIRIAWQSTSNQAIIHGVAAGF 235 Query: 238 GISILPA--LALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQG 293 G+S+LPA A + GS +ER+ ++ KN+ L+ A L + ++ G Sbjct: 236 GLSVLPASLAAEGVERGSIAEFSVEGLSMERKFCVIYHKNKFLARGARELIRLFKEGG 293 >UniRef50_A9I9S7 Transcriptional regulator, LysR-family n=1 Tax=Bordetella petrii DSM 12804 RepID=A9I9S7_BORPD Length = 307 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 85/285 (29%), Positives = 138/285 (48%), Gaps = 2/285 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 ++ +L+ + VA+ ++F A + +SQ A+S V+ E +L DR V LT Sbjct: 6 FTLTIPELEAVLLVAETRNFRMAAQHAHVSQPALSRRVQAAEQKLNAKLFDRDKHGVALT 65 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 DAG +L +R+L E +L D G V + A +++A L+P + +P Sbjct: 66 DAGTELVPIAQRMLSEFRDSLSDLSEFIAGRRGSVNIWALPSVAAALLPAAAQALRQSHP 125 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVID-PGPVGDLQCEAILSEPFFLLCHRDSALAV 179 ++ V+ + V +++ +G D GI I+ G D+ A+L E F L+C D LA Sbjct: 126 QVRLVIQAASARQVTQAVAEGKADLGISIEITGQPADVAFAALLKEQFVLICPVDDPLAR 185 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 W V AS R + D LA +G + + + + MVAAG+GI Sbjct: 186 RKRADWSVFADRPFVASGPASSIRVVTDRILAASGRAPDANYVADNISVVGAMVAAGVGI 245 Query: 240 SILPALALPLPEGSPL-VVKRITPVVERQLMLVRRKNRSLSTAAE 283 + +P LAL L + + L V +PV R++ ++ RK RSLS AA+ Sbjct: 246 AAVPQLALRLMDTTRLQSVALHSPVATREIGILVRKRRSLSAAAQ 290 >UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepID=A9W9P6_CHLAA Length = 301 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 87/291 (29%), Positives = 139/291 (47%), Gaps = 7/291 (2%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+ L+ F VA+ +RA + ++Q A+S + +LE G+ L DR R + LT+AG+ Sbjct: 3 LRHLRYFEAVARHSHVTRAAAELHIAQPALSKQISQLERELGITLFDRVGRSLRLTEAGE 62 Query: 65 QLALRLERLLDELNSTLRDTG-RMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 L +L ++ R+G + +G+V + A T+ AHL+P + H+RYP I Sbjct: 63 ALLPYARAILAQVEEARAAMAERIGLK-AGRVTIGAPPTVGAHLLPPLLTIFHQRYPGIT 121 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 LH+ Q +++ + G D +V P L +L+EP L+ LA V Sbjct: 122 LRLHEAGIQSLLDLLEAGITDLAVVALPVTDEQLTVTPLLNEPLVLIVSTTHPLARRSEV 181 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 L+ + +L + R A G V E G TL VAAG+G+S++P Sbjct: 182 MMTELRHERWILSPSSYELREATLKACREAGFTPQTVLEGGETETLVRFVAAGLGVSLVP 241 Query: 244 ALALPLPEGSPLVVKRITP--VVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 ALA+ G VV+ + R L LV R +R+ S AA AL + + ++ Sbjct: 242 ALAV---AGCTDVVRLTVSDQHLTRSLGLVWRSDRTASPAARALREFLVNE 289 >UniRef50_Q31FC6 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=Q31FC6_THICR Length = 318 Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 79/295 (26%), Positives = 151/295 (51%), Gaps = 14/295 (4%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 ++L+VF TVA+ SF++A E + ++Q AV+ VK+LE RL DRT ++ LTDAG+ Sbjct: 4 RRLQVFYTVAKVLSFTKAAETLHMTQPAVTFQVKQLEEFFNTRLFDRTHNKITLTDAGKI 63 Query: 66 LALRLERLLD---ELNSTLRD-TGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 + E++LD ++NS +R+ TG +++G + + AS TI+ +++P + +++ D Sbjct: 64 VYDYAEKILDHYEKMNSEVRELTG----EVTGSLLIGASTTIAEYMLPSLLGAFKKQFED 119 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + L ++ + +D G+V P +L+ E + L+ L+ D Sbjct: 120 VNIRLQVGNTDAIVAMVENNMIDLGVVEAPVYNKNLEVEVCRLDEMVLIVPHGHPLSNRD 179 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQA---NIVQEIGHPATLFPMVAAGIG 238 + + ++ + + ++ SGSR +ID + G+ N+V E+G P + V + +G Sbjct: 180 KISIEDMRKYRYISREEGSGSRSVIDNYIREQGLSYSDLNVVMELGSPEAVKMAVESDVG 239 Query: 239 ISILP--ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 ++I+ ++ L G+ L + P + R VR+K++ A L D D Sbjct: 240 LAIVSRTTISKELKLGT-LKALPLDPPLNRPFSHVRQKHKFRHRAVGELLDFAVD 293 >UniRef50_A6F002 Transcriptional regulator, LysR family protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F002_9ALTE Length = 299 Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 91/304 (29%), Positives = 151/304 (49%), Gaps = 11/304 (3%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN L L+ F +VA+++SFSRA E I +SQ AVS +V+ELE G+ LL+R +V LT Sbjct: 1 MNLHL--LRTFASVAEQRSFSRAAEAIHISQPAVSRAVRELEEQLGMALLERRGGQVRLT 58 Query: 61 DAGQQLALRLERLLDELNSTLRD-TGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRY 119 +AG +L + S + D GR G + G + + AS+TI + +P IAE R++ Sbjct: 59 EAGAELYQHARAIFALEQSAMADLRGRQGLE-RGSLTIGASRTIGTYFLPPVIAEFLRQF 117 Query: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAIL--SEPFFLLCHRDSAL 177 P I + + + + ++D + G V D + E + + +L H D L Sbjct: 118 PAIDVRIISENTELIQRRLLAYELDIAFI--EGSVEDSRVEEVFWHEDELVILAHSDHPL 175 Query: 178 AVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGI 237 + L + VL++ SG+R + A L + G++ + E+G L VAAG+ Sbjct: 176 LNRKSLKASDLDAERWVLREQGSGTRSVTLALLKQAGVKVDRTIEVGGNGALVQSVAAGL 235 Query: 238 GISILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 G++++ ++A L G V+ +R L +R +N+ S AA+AL V + Sbjct: 236 GLAMVSSVAAREHLSVGKVNVLN-FPDRFKRPLHRIRLRNKPESPAAQALVAVADRVAST 294 Query: 296 LMAG 299 + G Sbjct: 295 FLPG 298 >UniRef50_Q0A4N3 Transcriptional regulator, LysR family n=3 Tax=Ectothiorhodospiraceae RepID=Q0A4N3_ALHEH Length = 313 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 82/301 (27%), Positives = 152/301 (50%), Gaps = 19/301 (6%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +L+ L+ V V ++ F RA + +SQ +S VK+LE + GV+L++R TR+V+LT G Sbjct: 2 NLRDLRYLVAVGDQRHFGRAAKACFVSQPTLSAQVKKLEEYLGVQLVERGTRQVLLTPTG 61 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 +++ R +L++++ + + ++G++R+ A T++ +L+P +A + +P ++ Sbjct: 62 EEVVARARAVLNQVDDIVELCRAAAEPMTGELRLGAIPTLAPYLLPHLVATATEAWPRLR 121 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 +L++ ++E +R+G++D ++ P DL A+ EPF L D ALA Sbjct: 122 MLLYEERTALLVERLRKGELDGALMAMPVAGDDLASVAVFEEPFVLALPADHALAEAKRA 181 Query: 184 PWQALQGAKL--------VLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAA 235 P L+D A L A + +A ++ TL MVAA Sbjct: 182 PRPEALPEDELLLLEEGHCLRDQALEVCQLAGDAGGTSCFRATSLE------TLRQMVAA 235 Query: 236 GIGISILPALA----LPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVR 290 G+G+++LP LA +P S + + + PV R + L RK + ++ EA+ +R Sbjct: 236 GVGMTLLPRLAGQAGCEIPNQSAVKLLPFSPPVPTRTIGLYWRKGAARASTLEAVAAAIR 295 Query: 291 D 291 D Sbjct: 296 D 296 >UniRef50_C8W2B6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2B6_DESAS Length = 291 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 81/290 (27%), Positives = 140/290 (48%), Gaps = 10/290 (3%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+VF +VA+ S+S+AGE + LSQ AVS + LE G+ L + R+VVLTDAG+ Sbjct: 6 FNYLRVFHSVARHLSYSKAGEELNLSQPAVSRQISSLEKGLGLDLFTQRGRKVVLTDAGR 65 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 L +R++ R + G+VR+ S + +L+P + E + R+P+I+ Sbjct: 66 SLYDYADRIMGLAQQAGRTLAQYHDLERGEVRLGVSPVLGCYLLPSILKEFYTRFPNIKV 125 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLC--HRDSALAVEDY 182 L Q +++ I G +D +V+ P + E + L+C DS + E + Sbjct: 126 SLQLDSGQKLIKRIEDGKLDLALVVGPLESDRIHLERYTQDALVLVCPPGEDSPMFNEIF 185 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + L+ ++ S +R I+ LA+ I+ ++ EI + +V GIG++ L Sbjct: 186 INY------PLITREKPSSTRITIEDHLAKYDIRPKLIMEIPDNEVIKRLVITGIGVAFL 239 Query: 243 P--ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 P A+ L G+ VVK + R + LV K++ A + +R Sbjct: 240 PKRAVETELVSGALQVVKGEGTALTRWVYLVTAKDQHHCPTLLAFMNFMR 289 >UniRef50_A6VX33 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6VX33_MARMS Length = 293 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 78/294 (26%), Positives = 145/294 (49%), Gaps = 6/294 (2%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 + +L F+ VA+ SFS AG+++ ++Q AVS + LE+ GV+L DR R+V LT+AG Sbjct: 4 IAELLTFIKVAETSSFSEAGDQLFVTQPAVSKRIASLESSLGVKLFDRIGRQVQLTEAGI 63 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 +L + ++ ++L R Q +SG++R++ I H +P+ + +P+ Q Sbjct: 64 RLLPKARKMAEDLQDIKRSMTLQMQDVSGELRISTGHHIGLHRLPKSLKRFQENFPNAQL 123 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDL-QCEAILSEPFFLLCHRDSALAVEDYV 183 + + + + +G + GI+ L + I S+P + +D LA + V Sbjct: 124 EIEFVQSEEAYQDVLKGRAELGIITLSNKENPLIESLPIWSDPLTCVVSKDHPLARYNNV 183 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 L VL + + +R + + A + G++ + + L +V G G S+LP Sbjct: 184 SLIELAQHACVLPNKNTFTRQIAEQAFGKQGLKPQVRMNTNNLEILAMLVHIGWGWSLLP 243 Query: 244 ALALPLPEGSPLVVKRITPV-VERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 + + LVV + + VER+L ++ K R+LS AA A ++++ G +L Sbjct: 244 STLV----DEKLVVLNLPDLNVERKLGVIHHKQRTLSRAAVAFIELLKSDGTSL 293 >UniRef50_B1I114 Transcriptional regulator, LysR family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I114_DESAP Length = 296 Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 78/292 (26%), Positives = 141/292 (48%), Gaps = 5/292 (1%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +L L+ FV VA+ KSFSRA + + L+Q AVS + LE H G +L++RT+R V LTDAG Sbjct: 2 NLSYLETFVMVAKHKSFSRAAKTLSLTQPAVSKHISLLEAHYGTKLVNRTSRRVELTDAG 61 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 L R++ + + +++ G++ + AS +++P+ +++ + YP + Sbjct: 62 IVLYHFAGRIIATMERAKEEIVSFSEEVKGRLSIGASTIPGHYILPRILSDFKKEYPLVN 121 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 L V+ +++ + G++ P ++ C S+ L+ RD L + Sbjct: 122 VSLEVSNTGKVINRLQEEAIQVGVIGAPVDSPEINCTEFSSDEVVLIMPRDHPLVFRKEL 181 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQ---EIGHPATLFPMVAAGIGIS 240 L G K+V+++ SG+R +++ LA I + +Q E G + V AG+GIS Sbjct: 182 VTDDLVGEKVVVRENDSGTRRIVEEKLAAADIPLDSLQIAGEFGSTEAVLAAVEAGLGIS 241 Query: 241 ILPALALPLPEGSPLVVKRITPVV--ERQLMLVRRKNRSLSTAAEALWDVVR 290 + A +V R + R L ++ ++RSLS A ++ Sbjct: 242 FVSRWAAEKVALEGRIVMRTLQDLRFSRSLYIIYLRDRSLSRPTHAFLSFIK 293 >UniRef50_Q0B7J0 Transcriptional regulator, LysR family n=1 Tax=Burkholderia ambifaria AMMD RepID=Q0B7J0_BURCM Length = 298 Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 73/288 (25%), Positives = 140/288 (48%), Gaps = 1/288 (0%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+ L+ F +A+ +F++A +++ +SQS +SH++K+LE+ V L DR + V L G+ Sbjct: 3 LRHLRSFNVLAECANFTQAAKQLHVSQSTLSHTIKQLEDELKVELFDRVGKRVTLNRDGK 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 Q + R L EL+S + +LSG++R+ + T + L+P C++E + P + Sbjct: 63 QFLGTVARTLGELDSGIVSLRNCISELSGELRIGTTSTFNVRLLPGCVSEFLTQNPTVHV 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 + + P + + E +R G +D GI P G L E + +E + + LA + Sbjct: 123 TIAELPGKSIEERVRNGQLDVGICYTPSDTGGLWFEPLFNEELVIFAPLNHPLAKRRRIR 182 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPA 244 L L+L G+R +++A Q V EI +F + + + I + + Sbjct: 183 MVELHRQPLILPSAEVGARHILNACFRAVHAQPTPVAEINSIVPMFEL-SRSLRIPTIGS 241 Query: 245 LALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 L VV+ + P R +L+++++ S ++A D+++ Q Sbjct: 242 EFLSKAVSDFAVVRIVDPKPIRTPVLLQKQDGPQSATSKAFADILKRQ 289 >UniRef50_Q6ANM2 Related to transcriptional regulator n=3 Tax=Desulfobulbaceae RepID=Q6ANM2_DESPS Length = 329 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 81/287 (28%), Positives = 144/287 (50%), Gaps = 8/287 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ +L+QL++F+ VA+ ++A +++ ++QSAVS ++ ELEN G L DR R ++L Sbjct: 5 MSITLRQLEIFIAVAETAQVTKASKKLFVTQSAVSMALAELENQLGGSLFDRHGRSLLLN 64 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ L + + ++++ L G + V AS T+ +++P I R +P Sbjct: 65 ARGRYLLPLAKEISGQISNIEVIMSEKNDTLEGHIEVVASTTLGNYILPYLIGAFKRVHP 124 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPV---GDLQCEAILSEPFFLLCHRDSAL 177 +Q + + E +R G +D G V GPV DL + +LC + L Sbjct: 125 KVQVNMLVYNTRQAKELVRAGKMDVGYV--EGPVQATEDLHVRPWFEDELVVLCGPNDPL 182 Query: 178 AVEDYVPWQA-LQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAG 236 A L GAK ++++ SG+ + + ++ ++V E+GHP + V +G Sbjct: 183 ANNTAFDVDTDLAGAKWIVREPGSGTAAYFEKKMGKHFENVSVVMELGHPEAIKRAVESG 242 Query: 237 IGISILPALALPL-PEGSPLVVKRITPV-VERQLMLVRRKNRSLSTA 281 +GIS L AL + E L +I V ++RQL +V+RK+ ++ A Sbjct: 243 VGISCLSALCICREKENGWLKSLKIEGVDMKRQLRVVQRKDVVMTDA 289 >UniRef50_B5KEU1 Transcriptional regulator, LysR family, putative n=1 Tax=Octadecabacter antarcticus 238 RepID=B5KEU1_9RHOB Length = 307 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 76/240 (31%), Positives = 115/240 (47%), Gaps = 8/240 (3%) Query: 8 LKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLA 67 + FV VA+ SFSRA ER+ S SAV+ + LE VRLL RTTR + LTDAG++ Sbjct: 10 IATFVAVAEAGSFSRAAERVSRSPSAVTDHINRLEALLEVRLLVRTTRSMRLTDAGEKFL 69 Query: 68 LRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLH 127 R RLL++ N + D G++ +A S TI+ L+P+ + R P + L Sbjct: 70 ARGRRLLNDTNKLVTDFKDDNNAFMGRLVLAVSPTIAVSLMPKTLTTIAERQPGLMISLM 129 Query: 128 DRPQQWVMESIRQGDVDFGIVIDPGPVGD----LQCEAILSEPFFLLCHRDSALAVEDYV 183 + + +++ + G V FGI GP D L I + F L+ +A Y Sbjct: 130 EALRTEMLQLVESGAVAFGI----GPYDDVPDALVFRPIFGQEFRLILPEKHPIAARGYA 185 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 L G ++ S +R ++D G + E TLF +VAAG+G +++P Sbjct: 186 RPDDLSGLDMMCPSVGSTARQVLDELTRSAGFKVIPRYETLQYPTLFALVAAGLGATVMP 245 >UniRef50_A6X5N5 Transcriptional regulator, LysR family n=37 Tax=Brucellaceae RepID=A6X5N5_OCHA4 Length = 301 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 70/250 (28%), Positives = 131/250 (52%), Gaps = 6/250 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +N S++QL F+ + + SFSRA E +G++QS +S +++ LE GV L+DR+ R + L Sbjct: 2 LNISVRQLHYFMALVKAGSFSRAAEVVGITQSTLSAAIQALETELGVTLIDRSGRRMQLL 61 Query: 61 DAGQQLALRLER---LLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHR 117 AG+ R L++EL R R L+ ++R+ +I+ L+P+ + + + Sbjct: 62 PAGEDFLARARTIIALIEELPEHARQAER---PLTTRLRMGVIPSIAPFLLPKVLPATAK 118 Query: 118 RYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSAL 177 +P++Q + + + +++S+R G +D +V P + + + + + F+L RD AL Sbjct: 119 AFPELQLTIREGLTRSLLDSLRSGSLDVALVAHPYDLDEFEIAELGRDIFYLAVRRDHAL 178 Query: 178 AVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGI 237 A D + LQG +L + R + AA+ QA+ TL +V G+ Sbjct: 179 ANRDQIDADDLQGQPFLLLETGHCLREHVMAAIGSTPAQASGDVHATSIMTLVQLVDFGM 238 Query: 238 GISILPALAL 247 G+++LP +A+ Sbjct: 239 GVTLLPEVAV 248 >UniRef50_D0DE20 Transcriptional Regulator, LysR family n=1 Tax=Citreicella sp. SE45 RepID=D0DE20_9RHOB Length = 295 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 121/248 (48%), Gaps = 5/248 (2%) Query: 7 QLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQL 66 Q++ V +A+E F+RA +G+SQ A+S ++ +E G+ L DR R V LT AG L Sbjct: 5 QMRAIVVLAEELHFARAARILGISQPALSQKIQRVETEIGMTLFDRGQRHVSLTPAGTAL 64 Query: 67 ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVL 126 L LL +++ L GR+ + G +RV + S HL+P I RR+P+ Q L Sbjct: 65 VADLPELLTRIDTVLARAGRIARGDEGFLRVGFIENASFHLVPHVITRLRRRFPNAQVEL 124 Query: 127 HDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQ 186 + + +++ +GD+D + P P L+ ++ E +++ L ++ VP + Sbjct: 125 VEMISPDIPDALARGDIDVALT-RPLPTDTLRAHEVMRERYYVALSDGDPLVRQETVPVR 183 Query: 187 ALQGAKLVLQDYASGS--RPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP- 243 AL + S R A R+G + I QE+ + +VAAG G +ILP Sbjct: 184 ALCEMTFIAAAGRKSSYLRGQFAALFERHGFRLGIGQEVNQLPAIIALVAAGGGFTILPR 243 Query: 244 -ALALPLP 250 A L +P Sbjct: 244 SATGLSIP 251 >UniRef50_B2A0Q8 Transcriptional regulator, LysR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A0Q8_NATTJ Length = 300 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 79/298 (26%), Positives = 133/298 (44%), Gaps = 12/298 (4%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 +QL+VFVT+ +E +FS+A +R+ L+Q VS V LE G++L +R R+ VLT+AGQ Sbjct: 3 FRQLEVFVTIVEEGNFSKAAKRLYLTQPTVSAHVDSLERECGMKLFERRNRQAVLTEAGQ 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 LLD R Q++ GK+ + ASQT +L+P +A ++YP F Sbjct: 63 NFYPYAVDLLDMKERAHESFARFNQEIDGKITINASQTPGIYLLPNLLAPYQKKYPRSSF 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 + V E+I + D G V P L + ++++ L+ +++ Sbjct: 123 RITISDTDGVFENILNYEADLGFVGSPKTSDKLVAKPLINDQLVLIADSPFKEKLDEQQK 182 Query: 185 WQALQGAK------LVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATL---FPMVAA 235 Q + K +++ S +R + + LA +Q G L V Sbjct: 183 KQGVLYMKDLLDLPFIIRTEGSATRKVFEKTLAEQEKSIKNLQIAGQVDNLEGVKSFVHQ 242 Query: 236 GIGISILPALALPLPEG-SPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 G+G+S + +L ++ + P ER+ L+ K+R S E V+DQ Sbjct: 243 GVGVSFVSKFSLNRDTSLKSFYIQDLMP--ERKFYLIYHKDRVFSPTCERFIAHVQDQ 298 >UniRef50_C0ZI27 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI27_BREBN Length = 307 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 3/287 (1%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+QL+ F+ + +E FSRA E++ SQS +S +K LEN GV L DR + + LT+AG+ Sbjct: 3 LRQLEYFMAICEEMHFSRASEKLCTSQSNLSQQIKFLENELGVPLFDRLGKRITLTEAGK 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 L + + ++ M G + + + L + E HR YP Sbjct: 63 VLLEQSRHVFSHIDYAREAIAAMKNNEGGTLTIGVLPGDADLLFDALLVEFHRLYPKTSL 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 + + + ++E I G++D G+ + P P + + E F L HR LA E + Sbjct: 123 SVIESTR--IVEQITSGEIDLGVTVLPEPDERITVIPLFHEEFALAVHRAHPLAKEKAIK 180 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPA 244 + LQ K+V+ +R LI+ + G + E + +V GIG ILP+ Sbjct: 181 FGQLQEVKMVMFPPDHQARQLINRYCIQEGFRLQPHIETTTLQSQLSLVKKGIGGCILPS 240 Query: 245 LAL-PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 L L + + ++ + P + + LV RK++ + AA D ++ Sbjct: 241 LLLQNVNDDEIAIINLLHPTPSQDICLVYRKDKYMGFAARTFIDTLQ 287 >UniRef50_A1WRQ7 Transcriptional regulator, LysR family n=2 Tax=Burkholderiales RepID=A1WRQ7_VEREI Length = 299 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 85/294 (28%), Positives = 130/294 (44%), Gaps = 2/294 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +LKQL+VF + + +SF+ A ++QSAVS ELE+ G L +R+TR V Sbjct: 1 MNITLKQLRVFCALYELRSFTAAARAAFVTQSAVSKLCAELESEVGQPLFERSTRSVTPC 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 + +++L + + R + G V VAAS + L+ +A HR YP Sbjct: 61 EGAADFYTYAQQILSTVRAAERSMSSLRSLERGIVGVAASPMVMYGLLGDPLASYHRNYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ L++ + +R G VD GIV +L I + + +C D LA E Sbjct: 121 GIKLDLYELSTDETITYVRHGKVDMGIVSLEVKDAELATRPIFRDFMYAVCTSDHPLAQE 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + V W L + A R ID + + + E ++ MV +G+GI+ Sbjct: 181 EKVSWSELAKYDHIGLHSAYNVRRSIDRICEQLHLDIHFKIEASMVTSVLGMVRSGLGIT 240 Query: 241 ILPALALPLPE--GSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 ++P G LV R P +L LV+R S AA AL + V Q Sbjct: 241 VVPGYICDFARHLGLVLVEIRGAPKYPVELWLVQRTATRPSLAASALLECVEQQ 294 >UniRef50_C9KJX6 Transcriptional regulator, LysR family n=2 Tax=Veillonellaceae RepID=C9KJX6_9FIRM Length = 302 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 76/295 (25%), Positives = 134/295 (45%), Gaps = 18/295 (6%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+QL+ F ++ ++ +RA ER+ +SQ ++ ++K+LE G++L DR+ +++ LT G Sbjct: 3 LRQLEYFQMASRLRNITRAAERLRVSQPNITVAIKKLEAELGIQLFDRSQKQLALTPEGA 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 R+E L + + + Q G +++ + A+L P+ + RRY + Sbjct: 63 VFLNRVELALRNIQDAVLEVNDYKQLQKGTIKIGVPPMMGAYLFPRIFSSFQRRYSHLDI 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 +H+ + E + ++DFGI+I G LQ + S LA + + Sbjct: 123 FMHEEASMSIREQLEHDELDFGIIILSGASNRLQLLPMSKNQIVCCVPASSPLAKKKAIS 182 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI--- 241 + K+V+ S R I + GI NIV E TL +VA G+GI+ Sbjct: 183 MNDVADTKIVMLKEGSFLRQTILGRMKDEGITPNIVLESNQINTLKGLVANGVGITFRLD 242 Query: 242 -----LPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 +P L LP P+ V + L +K+R +S AA++ D +D Sbjct: 243 MVADEMPGLK-TLPLADPIFV---------DVGLAWKKDRYISKAAQSFIDFCKD 287 >UniRef50_C6D0V7 Transcriptional regulator, LysR family n=4 Tax=Bacillales RepID=C6D0V7_PAESJ Length = 299 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 77/285 (27%), Positives = 140/285 (49%), Gaps = 4/285 (1%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L QL+ F+TVA+ + + A + ++QS++S +++ LE GV L DR R++ L ++G Sbjct: 7 LLQLQYFLTVARLEHVTEAARHLHVTQSSLSKTIQRLEEDLGVLLFDRVGRKLRLNESGS 66 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 + LR ER L EL+ ++ G + +A + +A ++P + E ++ P+IQF Sbjct: 67 RFLLRAERALFELDQGKQELNDWSSPEQGTIELAVN---TASMLPNILREFRKKKPNIQF 123 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 + Q ++ + +GD+DF + P D++C+ + + L LA V Sbjct: 124 HVQMLTTQEMVAHLHRGDIDFCLSSPPLEGEDIECQIMYRDAILLAVPESHRLAGRSSVS 183 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPA 244 L+ V G+R L+D+ + G + V E PA + +V A IGI+ +P Sbjct: 184 LPELKEEWFVGVKKGYGTRDLVDSICKKAGFEPKFVYEGDEPARINALVEAEIGIAFIPG 243 Query: 245 LALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 A G ++ + R++ L+ K+R +S AA++ VV Sbjct: 244 TARN-SNGQIAYLEIDNNELVREIALLWHKSRYVSRAAQSFRKVV 287 >UniRef50_C5BQI4 Transcriptional regulator, LysR family n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BQI4_TERTT Length = 305 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 15/295 (5%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 +KQL+ V +A E+ RA ER+ ++Q A+S +++LE G L +R R + LT AGQ Sbjct: 3 IKQLRYLVGIADEQHVGRAAERLHVTQPALSQQLRKLEEEIGSPLFERHHRGMRLTIAGQ 62 Query: 65 -------QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHR 117 Q+ ++E +E++S L DTG V + Q+++ HLIP I+ Sbjct: 63 VMLKHARQILAQMEDARNEIDS-LADTGEC------LVHIGTIQSMNFHLIPTAISRLQE 115 Query: 118 RYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSAL 177 P+I + + + +S+ + +DFGI P DL E + SE F+L HR L Sbjct: 116 SEPNIHVRVAELSGSQLEDSVAKEKLDFGIGFLPTIREDLVTEQLFSENFYLAVHRSHPL 175 Query: 178 AVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGI 237 A ++ V ++ L G + L SR L D A R I+ I E A+L + Sbjct: 176 AEQEVVDFKQLHGLSMALLTDRYISRRLFDTAALRASIRPKIKVETNTTASLLLIACVSQ 235 Query: 238 GISILPALALP-LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 +LP A+P + ++ P ++R + L+ KN L+ A +L +RD Sbjct: 236 LAVVLPRAAIPEWIQSKVAMITLKNPTLQRSVGLIWGKNNVLTHQALSLAASIRD 290 >UniRef50_Q7W708 Putative LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W708_BORPA Length = 298 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/241 (29%), Positives = 115/241 (47%), Gaps = 2/241 (0%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 LKQ++ FV VA+E+SFSRA ER+ +SQ +S +K LE L R R + LT AG Sbjct: 3 LKQMRYFVAVAEERSFSRAAERLHISQPPLSQQIKALEEELNAPLFHRLPRGISLTAAGA 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 L +L + ++T ++ + G VR+ + AHL+P + + R P + Sbjct: 63 ALLKSSRAILANVRLAAQETTQIAAGMLGTVRMGTVSSALAHLVPYILTQVKRSMPGSKV 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 L + + ++ + ++D G+V P DL+ IL EPF+ LA + VP Sbjct: 123 ELTEMSSREQTLAVLRDELDIGLVHTPIDTADLRTRQILREPFYAAVPSQHPLASREAVP 182 Query: 185 WQALQGAKLVL--QDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 L + V + ASG + + G I H +T+ MVA G+G++I+ Sbjct: 183 VAELASEEFVFFPRTLASGLFDKMVSLCMNAGFSPKIHHTARHQSTMLQMVAMGLGVTIV 242 Query: 243 P 243 P Sbjct: 243 P 243 >UniRef50_A4FHZ4 Transcriptional regulator, LysR family n=2 Tax=Actinomycetales RepID=A4FHZ4_SACEN Length = 303 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 92/280 (32%), Positives = 140/280 (50%), Gaps = 6/280 (2%) Query: 25 ERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLALRL-ERLLDELNSTLRD 83 E + +SQS++S +V +LE G RLL+R TR V LT AG + ALR+ ER+++ + ++D Sbjct: 21 EELHVSQSSLSRAVADLERLLGARLLERDTRNVQLTAAGAE-ALRVAERIVNAHRAGMQD 79 Query: 84 TGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLHDRPQQWVMESIRQGDV 143 R SG V VA +++A L+PQ I+ + P + + D ++ V+ + GD Sbjct: 80 LRRFLLGESGAVAVATLPSVAAVLLPQVISAFRAQRPRVAVHIMDGLERSVLGRVLSGDA 139 Query: 144 DFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQALQGAKLVLQDYASGSR 203 DF I P L+ ++ + F + D V W+ L G + S R Sbjct: 140 DFAITTVGEPSDQLEQRPLVRDRFVAVLPPDHPFTEAPEVAWEDLAGEPFLAVGRDSSVR 199 Query: 204 PLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALALPLPEGSPLVVKR-ITP 262 L DAA A+ A E AT+ +VAAG+G+S LPAL LPL P+V + + P Sbjct: 200 RLTDAAFAQIDAHAAPAAEASSVATVGGLVAAGLGVSALPALVLPLVGAGPVVTRPLVEP 259 Query: 263 VVERQLMLVRRKNRSLSTAAEAL---WDVVRDQGNALMAG 299 V+R+L + R R+ AA+ D R +G L G Sbjct: 260 EVDRRLDIALRAQRARPLAADRFLETLDEFRQEGRDLPTG 299 >UniRef50_C3DB38 Transcription regulator LysR family VC1617 n=7 Tax=Bacillaceae RepID=C3DB38_BACTU Length = 315 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/294 (22%), Positives = 142/294 (48%), Gaps = 9/294 (3%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+QL+ F+T+ +E F+RA +++G++Q +SH +K LE+ G+ L DR +++ +TD G Sbjct: 3 LRQLEYFITLCKELHFTRAADKLGITQPTLSHQIKALEDEIGMPLFDRLGKKIAITDVGY 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 LA + + + L++ + + + GK+ +A +L+ + + H+ YP++ Sbjct: 63 ILAKECKTIFNALDNVKEEISELKEIKGGKIAIATLPGELTNLVSTLLLDFHKNYPEV-- 120 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEP-----FFLLCHRDSALAV 179 ++ ++E I Q V+F + ID + E I+ P FL+ ++ +L Sbjct: 121 IVKIISSDEILELINQNQVNFAVTIDSSDYV-FEEEKIIKIPLYTDELFLVLSKNHSLVN 179 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 E + + L L+L R L+D I + E +LF V + G+ Sbjct: 180 EKEIQFSELNKLPLILFPDNHECRKLLDYTCIARKINMYPIIETSSIESLFDFVRSDFGV 239 Query: 240 SILPALALPLPEGSPL-VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 +++ L + E + L + + P V R++ L+ R+++ + +++ ++ Sbjct: 240 TVVSKTLLDITEDNDLSAIPIVNPSVSREVNLILRRDKFIGFGTRNFIELLTNE 293 >UniRef50_D1PCH2 Transcriptional regulator, LysR family n=10 Tax=Bacteroidales RepID=D1PCH2_9BACT Length = 297 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 75/276 (27%), Positives = 137/276 (49%), Gaps = 5/276 (1%) Query: 7 QLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQL 66 +LKVF +VA SF++A + +SQ A+S ++ELE GV+L DR + LT AGQ + Sbjct: 5 RLKVFRSVATLLSFTKAANELFISQPAISKHIQELEKEYGVQLFDRIGNRIQLTRAGQLM 64 Query: 67 ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVL 126 +++D + D ++ ++ G++R+ AS TIS +++P+ IAE + YPDI+ L Sbjct: 65 LDHACKIIDAYQNLDFDMKKLTEKSGGELRIGASTTISQYVLPELIAEFRKLYPDIRLTL 124 Query: 127 HDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQ 186 + +++ G +D G+V + + + H + LA +D + Sbjct: 125 LSGNSHEIEDALAAGRIDLGMVEGIKRQPTFKYTPFMKDELVAFVHCSNPLAQQDEISLN 184 Query: 187 ALQGAKLVLQDYASGSRPLIDAALARNGI---QANIVQEIGHPATLFPMV--AAGIGISI 241 L+ +VL++ SG+ +I AL NGI NI +G + V + +GI Sbjct: 185 LLRQTPIVLRELGSGTLDVIQKALQENGIALSDLNIEMNLGTTEGIKHFVEHSLSMGIIS 244 Query: 242 LPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRS 277 + A+ + E V++ +ER+ + V ++ + Sbjct: 245 IRAIYRSIYEQVFKVLEIENLKMEREFLFVEKRGET 280 >UniRef50_Q3A466 Transcriptional regulator, LysR family n=6 Tax=Desulfuromonadales RepID=Q3A466_PELCD Length = 308 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 76/250 (30%), Positives = 130/250 (52%), Gaps = 6/250 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ +L++L VF VA+ +++GE + +SQ A+S ++KELE + G +L R R ++L Sbjct: 1 MSITLRKLAVFTKVAETGQATKSGELLLMSQPAISMALKELEENAGGQLFIRQGRRLILN 60 Query: 61 DAGQQL---ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHR 117 D G+ L A + R + + L ++ R Q G +R+ AS TI +L+P IA Sbjct: 61 DRGRLLLEPAQEILRRVARFENLLAESER---QPRGLLRIGASTTIGNYLLPSLIARYSC 117 Query: 118 RYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSAL 177 Y D + L + S+ +GD+D G++ P L+ ++ ++ R+ + Sbjct: 118 LYTDAKASLQVGNTHQIEVSLDRGDIDLGLIEGPSHAPLLKAIPWRNDELVVIAGREHPI 177 Query: 178 AVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGI 237 + V L+ A ++++ SG+R + +AALA G NI E+GH + V AG+ Sbjct: 178 TKINSVTADMLEKANWIMREPGSGTREVFEAALAEFGGSINIDLELGHTEAIKKAVEAGL 237 Query: 238 GISILPALAL 247 GIS L LA+ Sbjct: 238 GISCLSRLAV 247 >UniRef50_Q21B31 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q21B31_RHOPB Length = 364 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 77/279 (27%), Positives = 142/279 (50%), Gaps = 6/279 (2%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 S +Q++ F+ +A+ F+ A + + +SQ ++ + +LE G+RL DR R V LT AG Sbjct: 6 SFRQVRAFLALARHLKFTSAAQELNVSQPTLTVQINQLEQQLGIRLFDRDKRRVELTPAG 65 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 + + +ERL ++ L + G +RVAA +++A +P+ I + + P I Sbjct: 66 RNILPLMERLSLNMDEVLLAASDLTYAKRGIIRVAALPSVAASFLPRGIKDFREQNPGII 125 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEP---FFLLCHRDSALAVE 180 + D + +++ ++ +VDFGI ++ + LS+ FF + H + A Sbjct: 126 IDVWDVVGEEIIKLVKAEEVDFGIGTHFSADKSIKVQDYLSDSLCAFFPVEHPLNTAASV 185 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 YV + + LV+ S R L + ++AR G + NIV E + +T M AG+G++ Sbjct: 186 VYV--RDVASCPLVVTRKNSSVRVLFERSMAREGCELNIVMETNYMSTALSMARAGVGVA 243 Query: 241 ILPALALPLPEGSPLVVKRITPV-VERQLMLVRRKNRSL 278 ILP+ A+ + L K I P R++ ++ + +R+L Sbjct: 244 ILPSTAVEAGNMAGLSFKPIDPPHFNRRVGIICKADRTL 282 >UniRef50_A7ZAT2 Putative HTH-type transcriptional regulator n=2 Tax=Bacteria RepID=A7ZAT2_BACA2 Length = 302 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 77/284 (27%), Positives = 137/284 (48%), Gaps = 11/284 (3%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 ++Q+ F+ VA+ SF++A E + LSQ A+S VK LE V L+DR+ R++ LTDAG+ Sbjct: 3 IRQITYFLEVAKSNSFTKASENLHLSQPALSKMVKSLEEELKVELIDRSARQIALTDAGE 62 Query: 65 ---QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 + + + +D+L++ L D + + GKV++ I P+ I + YPD Sbjct: 63 IVFEQGQMIMKSIDDLSTNLYDLLHLKK---GKVKIGIPPLIGVLFFPKIIRGFKQLYPD 119 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + L + V + + G +D G+VI+P +L+E L H L ++ Sbjct: 120 VNIKLIEHGGNKVKQEVEDGVLDLGVVIEPVDEEQFDIIPLLNEELMLFVHSAHPLVHKE 179 Query: 182 YVPWQALQGAKLVL--QDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 V Q L+ +L +D++ R I R G + NIV E + M+ +GI Sbjct: 180 IVEMQDLKNEPFILFSEDFSLHDR--IIQECIRAGFRPNIVYESSQWDFISEMIGEELGI 237 Query: 240 SILPALALPLPEGSPL-VVKRITPVVERQLMLVRRKNRSLSTAA 282 SI P + + S + + + P + ++ ++ +K + +S A Sbjct: 238 SIFPQSIVKKTDQSLVKAISIVNPSIPWKVAIILKKGKYVSHAV 281 >UniRef50_C7RSN5 Transcriptional regulator, LysR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RSN5_9PROT Length = 300 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 87/298 (29%), Positives = 140/298 (46%), Gaps = 6/298 (2%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 ++L+VF VA+ SF++AGE + ++Q AV+ +K+LE RL DR + LT AG+ Sbjct: 4 RRLQVFHAVAKHLSFTKAGEALHMTQPAVTFQIKQLEERFNTRLFDRGGGRIALTQAGEL 63 Query: 66 LALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFV 125 + ER+L M Q+SG + V AS TI+ ++P + E + RYP ++ Sbjct: 64 VLDYAERILGLSADLDLRVAEMTGQMSGSLLVGASTTIAEFMLPPILGEFNVRYPQVRAR 123 Query: 126 LHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPW 185 L + + +I +D G+V LQCE + ++C LA V Sbjct: 124 LTVANSEAISNAIAAHTLDIGLVESLVNHPSLQCEVCGDDELQVICTPTHPLAQRTDVDA 183 Query: 186 QALQGAKLVLQDYASGSRPLIDAALARNGI---QANIVQEIGHPATLFPMVAAGIGISIL 242 ++L + ++ SG+R + D L G+ Q + E+ P L +VA G+G SI+ Sbjct: 184 RSLMAHDFIAREPGSGTREVTDDYLRACGVEPAQIKTLMELASPEALKGVVATGLGFSIV 243 Query: 243 PALALPLPE--GSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 + GS LV + P ++R L LV +K R S D R++ L A Sbjct: 244 SRASFEKERQLGS-LVAIPLRPRLKRTLSLVYQKERFRSKVVLTFVDFARNKLRELSA 300 >UniRef50_Q97GH3 Transcriptional regulator, LysR family n=2 Tax=Clostridium RepID=Q97GH3_CLOAB Length = 286 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 70/287 (24%), Positives = 138/287 (48%), Gaps = 5/287 (1%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 +KQLK F T+A+E + A +++ ++Q +S+ +K LE GV+L++R +R + LTDAG Sbjct: 3 IKQLKYFYTIAEEGKITTAAKKLHIAQPPLSYQLKNLETELGVKLVERGSRNIKLTDAGL 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 L R +++L+ +T+ + G + + + L+ + + H++YP I F Sbjct: 63 MLYNRAKQILNLTQTTIDELNDFKNGTHGTLSIGTVSSSGWSLVNNILIKFHKKYPLINF 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 +H+ ++E +++G ++F IV P L C + EP + D ++ + Sbjct: 123 EIHEGNTYELLEILKRGIIEFAIVRTPFNSYGLNCIYLPKEPMVAVMREDFNYSLSNTTK 182 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPA 244 L+ L+ + LI A + + + + T +AG GI+I+P Sbjct: 183 ISELKDKPLI---FYRRFEKLIYEACENSNFRPKVFCKNDDARTTLLWASAGFGIAIVPK 239 Query: 245 LALPLPEGSPLVVKRITPV-VERQLMLVRRKNRSLSTAAEALWDVVR 290 + L S L+ K+I + QL + KN +S++A+ +++ Sbjct: 240 SVVSLG-NSNLIYKKIEDASLSTQLAAIWPKNNYISSSAKNFFEMFN 285 >UniRef50_B1ZJS2 Transcriptional regulator, LysR family n=8 Tax=Alphaproteobacteria RepID=B1ZJS2_METPB Length = 336 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 85/259 (32%), Positives = 126/259 (48%), Gaps = 7/259 (2%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 SL+ L+ V VA E F RA ER +SQ +S V++LEN G+ L +R+ R V+LT AG Sbjct: 7 SLRDLEYVVAVADEGHFGRAAERCNVSQPTLSVQVRKLENALGLTLFERSNRRVLLTVAG 66 Query: 64 QQLALRLERLLDELNS--TLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 Q + + +L E L GR G L+G++ +AA QT+ + P + + +P Sbjct: 67 QGIVRQARVVLGEAQRLLALAVEGR-GSPLTGRLVLAAIQTLGPYYFPLVLRLLRQEFPL 125 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + L + +++ +R G +D +V P L + EPF L C D A A Sbjct: 126 LTLALSEARTAEILDGLRDGRIDAALVSLPVAASGLTVSPLFVEPFRLACPADHAFAQGA 185 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + L G L+L D + R D +A G + TL MVAAG G ++ Sbjct: 186 PPRAENLNGPDLLLLDEGNCLR---DQTIAACGTLRGAGRHATSLETLRSMVAAGAGYTL 242 Query: 242 LPALALPL-PEGSPLVVKR 259 +PALA+P P+ S L V R Sbjct: 243 IPALAVPAGPDPSGLTVMR 261 >UniRef50_Q0BXT0 Putative oxidative stress regulatory protein OxyR n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BXT0_HYPNA Length = 309 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 85/303 (28%), Positives = 148/303 (48%), Gaps = 18/303 (5%) Query: 1 MNY-SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVL 59 MN +L+QL+ V + + SFSRA E ++Q +S +KELE+ GV L +R +R L Sbjct: 3 MNIPTLRQLQFLVALGESGSFSRAAEACHVTQPTLSAGIKELEDLFGVALAERESRGATL 62 Query: 60 TDAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRY 119 T AG+ R LL + ++ ++ G SG + A TI+ ++PQ + + RRY Sbjct: 63 THAGEIAVARASALLADAHALVQAVTSAGALFSGPFHLGAIPTIAPFVLPQIVGQLTRRY 122 Query: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 PD++ L + +++ +R +D + P ++ + + F L L+ Sbjct: 123 PDLKLYLTEDRTHRLIDQLRARTLDAAFIALPWEAPGIEMMTLFDDEFLLAAPAGHPLSR 182 Query: 180 EDYVPWQALQGAKLV-------LQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPM 232 ++ + + LQG L+ L+D+A S + A R + A + TL M Sbjct: 183 KNGLSPEDLQGEDLLLLEDGHCLRDHAV-SVCRLKAGAGREQVAATSL------GTLVNM 235 Query: 233 VAAGIGISILPALALP--LPEGSPLVVKR-ITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 VA G+G+S++P LA L G + V+ +TP++ RQ+ + + A AL ++V Sbjct: 236 VAGGLGVSLIPRLAADNGLALGPDVAVRSFVTPIIGRQVGIAWKSGSPREAEARALGELV 295 Query: 290 RDQ 292 R+Q Sbjct: 296 REQ 298 >UniRef50_C3X7G6 Transcriptional regulator n=2 Tax=Oxalobacter formigenes RepID=C3X7G6_OXAFO Length = 291 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 142/283 (50%), Gaps = 4/283 (1%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 ++QL+ F +A+E SRA +R+ ++Q +S+ +K LE GV+L+DR TR + LT AG Sbjct: 3 IRQLRYFCAIAEEGQISRAAQRLHIAQPPLSYQLKLLEEELGVKLIDRNTRSLSLTKAGL 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 R E++L + + + ++G + + + I IP+ I H+ YP ++F Sbjct: 63 AFYQRAEQILGLMKVAAIEARDVEYGVNGVLTIGSPPAIGNIYIPERIKRFHQEYPHVRF 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV-EDYV 183 + ++E + ++FGI P P+G + + +L+E + + D + +D + Sbjct: 123 QWREGNTYRILELLNADMIEFGIARLPVPMGSYESKPLLTESWMAVSRNDDPKWIGKDNI 182 Query: 184 PWQALQGAKLVLQDYASG--SRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + L+G L+L +G ++ + G+ A++ E + + + +V A +GI+I Sbjct: 183 GLEELEGIPLILMQRQAGIHCHDMVIDEMKNKGVNADVFCESDNISAILSLVEAELGIAI 242 Query: 242 LPALALPL-PEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAE 283 LP L + P G + ++ ++ +K++ LS AA+ Sbjct: 243 LPVSTLSVRPSGDFHAMAIANCQLQSSSAILWKKDKPLSAAAK 285 >UniRef50_B0UQK5 Transcriptional regulator, LysR family n=2 Tax=Methylobacterium RepID=B0UQK5_METS4 Length = 313 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 87/261 (33%), Positives = 126/261 (48%), Gaps = 7/261 (2%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 SL+ L+ V VA+E F RA ER +SQ +S V++LE GV + +RT R V+LT Sbjct: 5 GLSLRDLEYVVAVAEEHHFGRAAERCAVSQPTLSVQVRKLEQALGVVIFERTNRRVLLTP 64 Query: 62 AGQQLALRLERLLDELNSTLRDTGRM--GQQLSGKVRVAASQTISAHLIPQCIAESHRRY 119 GQ + +R R + L R G LSG++ +AA QT+ +L P + + + Sbjct: 65 TGQAV-VRQARAVLAEARRLLLLAREGGGAPLSGRLVLAAIQTLGPYLFPLVLRPLRQDF 123 Query: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 P + L + ++E +R+G +D ++ P L + EPF L C D A A Sbjct: 124 PLLALALSEGRTAGILEGLREGRLDAALISLPIAEAGLTVAPLFREPFLLACPADHAFAA 183 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 D L G L+L D + R D +A G + + TL MVAAG G Sbjct: 184 GDPPKAADLAGPDLLLLDEGNCLR---DQTVAACGAGPSAGRHATSLETLRSMVAAGGGY 240 Query: 240 SILPALALPL-PEGSPLVVKR 259 ++LPALA P P+ S L V R Sbjct: 241 TLLPALAAPSGPDPSGLTVCR 261 >UniRef50_Q13R07 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13R07_BURXL Length = 314 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 83/294 (28%), Positives = 143/294 (48%), Gaps = 13/294 (4%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 SL+ L+ F VA SF+ A R+ +QS+++ ++++ E G++L DRTTR VV+T+ Sbjct: 5 SLRHLRCFAAVADTGSFTLAAARLYQTQSSLTATIQQFEEEVGLKLFDRTTRRVVMTEDA 64 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 + +R+L + ++ + D + G VR+A+ ++ H++ +A R YPDI Sbjct: 65 ARFKPIADRVLQDFDTAIGDLKAISLSHRGHVRIASVPSMIEHVLAPALASFRRAYPDIT 124 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALA-VEDY 182 + D V ++ G+ DFG+ DL IL + F +L D LA + Sbjct: 125 ISVSDGSADKVERAVLAGEADFGMASRLNNFPDLTYLPILGDRFGVLYPDDHPLAKIRQP 184 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQ-ANIVQEIGHPATLFPMVAAGIGISI 241 + W L + + +G +D+ A Q A++ +LF M+ G IS+ Sbjct: 185 LRWADLSEFEHIALANDTGIGAFLDSHPALGFHQKASLHDRASSTNSLFAMLNLGGRISV 244 Query: 242 LPALALPLPEGSPLVVKRIT------PVVERQLMLVRRKNRSLSTAAEALWDVV 289 LP L++ SPL K+ T PV+ R++ L+ R+ RS S + L D + Sbjct: 245 LPELSV---LASPL--KKFTFRELSEPVITREVCLITRQLRSFSPNTQRLVDAL 293 >UniRef50_B8FZV1 Transcriptional regulator, LysR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FZV1_DESHD Length = 301 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 147/295 (49%), Gaps = 14/295 (4%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 +Q++ FV+V + ++FSRAG+ + L+Q +S + +LE V+L DR++REV+ T AG Sbjct: 3 FRQIEAFVSVYRLRNFSRAGKALFLTQPTISSHISDLETELEVKLFDRSSREVMPTGAGD 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 LL+ + + + +Q+ G++ +AAS +L+P+ + + P+I+F Sbjct: 63 IFYQYAVNLLETRDCAISSLNQHNRQIEGRLEIAASTIPCQYLLPKLMIGFQKINPNIRF 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED-YV 183 ++H V++ +R+ GIV L E + + L+ RD A + + Sbjct: 123 LIHQGDTNQVIKKVREKKYQVGIVGTRTDEDKLDYEILTKDRLVLIAARDYIEAADSPCI 182 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQAN---IVQEIGHPATLFPMVAAGIGIS 240 ++L + +L++ SG+R + AL GI + +V E+ + + V+ G+G++ Sbjct: 183 AVESLLKKQFILRERGSGTRDTFETALKEKGIDPDTLKVVAEMNNTEAIKHAVSEGLGVA 242 Query: 241 ILPALALPLPEGSPLVVKRITPV------VERQLMLVRRKNRSLSTAAEALWDVV 289 ++ +L++ G+ L + +ER LV +N+ LS + A + + Sbjct: 243 VVSSLSV----GNELKSEAFQAFSIDGLELERSFYLVTYRNQPLSPSVAAFREFI 293 >UniRef50_A1BA89 Transcriptional regulator, LysR family n=4 Tax=Alphaproteobacteria RepID=A1BA89_PARDP Length = 324 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 3/295 (1%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +L+QL++F+ VA+ + +RA E + L+QSAVS +V LE GVR DR R +VLT+ G Sbjct: 26 TLEQLRIFLAVAERQHVTRAAEALNLTQSAVSAAVSALEARHGVRFFDRVGRRIVLTETG 85 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 + +LD + + + ++ G++RV ASQT++++ +P + +P I+ Sbjct: 86 EAFMAEARAVLDRVETAEMVLEDLSREPRGRLRVHASQTVASYWLPPRLVALREMHPGIE 145 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 L ++++ G D G+V G L + + + L+ D A + + Sbjct: 146 LRLTVSNTTHAADAVQDGGADLGLVEGAVAHGGLHRQVVARDRLVLVMATDHPWAGVEAM 205 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQ---EIGHPATLFPMVAAGIGIS 240 P L+ +L++ SG+R + LA G+ + E+ + VAA ++ Sbjct: 206 PQAGLEAQNWILREPGSGTRSEFETWLAGRGLSIAALPLSLELPSNEAVLNAVAASQCLA 265 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 L A+ P + + P ER L+ R + A +AL D++ D+G A Sbjct: 266 ALSQRAVARPAAAGWIRTLPLPGAERPFSLLTNPRRYRTRAVQALIDILTDEGFA 320 >UniRef50_D0KYG7 Transcriptional regulator, LysR family n=3 Tax=Gammaproteobacteria RepID=D0KYG7_HALNC Length = 312 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 84/299 (28%), Positives = 147/299 (49%), Gaps = 23/299 (7%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ- 64 ++LKVF TVA+ SF++A E + +Q AV+ V++LE H RL DRT V LTD G Sbjct: 4 RRLKVFNTVARLLSFTKAAEALHTTQPAVTFQVRQLEEHFDTRLFDRTHNRVTLTDVGHV 63 Query: 65 --QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 +++ R+ L DE++ +++ M ++ G + + AS TI+ +++P + + ++ D+ Sbjct: 64 VYEISERMFELYDEMDRRVKE---MTGEVGGSLNIGASTTIAENMLPALLGKFRLKHRDL 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVG--DLQCEAILSEPFFLLCHRDSALAVE 180 L + ++ + VD IV G VG +L E + ++ D LA Sbjct: 121 AVRLKVGNTEAIVSMVEHNVVDLAIV--EGTVGNKNLLVETCRRDELVVILPPDHQLAGL 178 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQA--NIVQEIGHPATLFPMVAAGIG 238 + V L + ++ SG+R ++ L +G ++ E+G P + V AG+G Sbjct: 179 ESVSLDQLMSYDFICREEGSGTREMVLNYLIEHGYSDGWDVCMELGSPEAIKGAVQAGMG 238 Query: 239 ISILPA------LALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 +SI+ A L L L + PL +P + R VR++++ A E L + RD Sbjct: 239 LSIMSASGITKELKLGLLKAVPL-----SPRLFRDFSFVRQRHKFRLPAMEDLLEFSRD 292 >UniRef50_B5YJV7 Transcriptional regulator n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJV7_THEYD Length = 302 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 73/290 (25%), Positives = 143/290 (49%), Gaps = 5/290 (1%) Query: 7 QLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQL 66 +LKVF TVA+ KSFS+ E I L+Q AVS ++ LE +L DR++ + LT AG+ L Sbjct: 5 KLKVFCTVAETKSFSKTSEIIHLTQPAVSLQIQALEELYETKLFDRSSGSITLTPAGEIL 64 Query: 67 ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVL 126 +++L ++ ++ + G V++ A T+ +++P + +R+P I+ + Sbjct: 65 YKYAKQILTMYAEAAKEISKITGLIKGCVKIGAGTTVGNYILPAVAVDFKKRHPKIRVSV 124 Query: 127 HDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQ 186 + ++E + +DFGI+ + ++I+S+ ++C D L + V Sbjct: 125 SIGNAKKILEMLNSSMIDFGIISEMPGKSKFIVDSIISDELCVICSADHPLNNQKSVSLY 184 Query: 187 ALQGAKLVLQDYASGSRPLIDAALARNGIQA---NIVQEIGHPATLFPMVAAGIGISILP 243 + V+++ S +R +I+ LA +G+ +I +G ++ V GIG+SI+ Sbjct: 185 DVVKEPFVIREEGSSTRVIIEKFLAEHGLSVSDLHISLILGSTGSIKEAVERGIGLSIVS 244 Query: 244 ALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 A+ + G+ ++K + R ++ KN LS A E +++ Sbjct: 245 KWAIRKEVSCGNLRILKLKEGKITRDFYIILPKNTILSPAVEEFITYLKN 294 >UniRef50_C0F0J2 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0F0J2_9FIRM Length = 297 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 66/248 (26%), Positives = 126/248 (50%), Gaps = 19/248 (7%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 S++ ++F+ VA+E++ ++A +++ L+Q VS ++KE+E H G R +R + + +T+ G Sbjct: 2 SIRHFRIFIAVAEEENITKAAKKLYLTQPTVSVAIKEIEEHYGARFFERINQRLHITEEG 61 Query: 64 QQL---ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 ++ A + DE+ ++T +G++RV AS I + IP+ I E RYP Sbjct: 62 KRFLDYAKHFIAMYDEMEIAFKNT-----DFTGRLRVGASVNIGTYYIPRLIREFRDRYP 116 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFL-----LCHRDS 175 I + V + + G +D +V G +Q E I++EP F +C + Sbjct: 117 GINVQVKINTTAVVEKELLDGKLDLALV-----GGTIQSEHIVAEPLFYEKYTAICAPEH 171 Query: 176 ALAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAA 235 +A + VP + L+ ++ +SG+ + +A+ + G+ V E TL V Sbjct: 172 PMAGKT-VPLEEFMKEPLLSREKSSGAYEVFQSAVNQTGLTVTPVWESTSQTTLMEAVHY 230 Query: 236 GIGISILP 243 G+G++I+P Sbjct: 231 GLGVTIVP 238 >UniRef50_B4CXF3 Transcriptional regulator, LysR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXF3_9BACT Length = 309 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 74/277 (26%), Positives = 137/277 (49%), Gaps = 1/277 (0%) Query: 14 VAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLALRLERL 73 VA+ +F+RA E+ +SQ ++S +++LE G RL DR R+ LT G+ R R+ Sbjct: 27 VARAGNFTRAAEQCRVSQPSLSQQIQKLEEELGERLFDRMKRQTKLTSYGEAFVRRAVRI 86 Query: 74 LDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLHDRPQQW 133 L+E LR+ LSG + + TI+ +L+P+ I+ R+YP ++ V+ + Sbjct: 87 LEEAEMALREATDAKSLLSGMLTIGVLPTIAPYLLPEAISAFARKYPGVEVVVQEDTTGH 146 Query: 134 VMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQALQGAKL 193 +++ + ++DF I +P + + + +E L LA + VP AL+G +L Sbjct: 147 LLKHLTTYEIDFAIASNPIEDSRFEIQELFAEELLLALPAGHPLARKRTVPASALKGERL 206 Query: 194 VLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALALPLPEGS 253 ++ + ++ + T++ +VAAG+G+S++PA+A + Sbjct: 207 IVMREGHCLGDQVLGFCEHREMKPTVSFRSAQLETIYALVAAGLGLSLIPAMAAATERAN 266 Query: 254 PLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVV 289 L ++ I P ER+++ V K R L AA D++ Sbjct: 267 ALELRSIQAPRPERKILAVWPKQRPLGRAARVFLDLM 303 >UniRef50_B0V4K3 HTH-type transcriptional regulator n=13 Tax=Acinetobacter RepID=B0V4K3_ACIBY Length = 299 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 74/252 (29%), Positives = 128/252 (50%), Gaps = 12/252 (4%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+ L+ F+TVA+E +FS+A ++ +Q ++S +K+LE GVRLL+RT R+V LT+ G Sbjct: 3 LRHLRYFITVAEELNFSKAALKLYTAQPSLSQQIKDLEEDVGVRLLNRTKRKVELTEEG- 61 Query: 65 QLALRLERLL----DELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 ++ L RL D+ + R + QQL +R+ + P + ++P Sbjct: 62 EVFLEHARLTLAQADKAVAMARQVSKAKQQL---LRIGFVPIAEMKIFPYVLPNLRLQHP 118 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 D+ L ++++++G++D D ++Q + +L+EP L R+ LA Sbjct: 119 DLTIELSSLNNAEQLKALKRGELDITFTRDNTENDEIQSQFVLTEPLIFLLPRNHPLAKY 178 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAAL---ARNGIQANIVQEIGHPATLFPMVAAGI 237 D++P +AL G ++ A S L + L +GI NIVQ+ + +G+ Sbjct: 179 DHIPVKALHGIDFIIP-AAEQSNTLHNTILEFTKTHGIDLNIVQKADSILLNINSIGSGL 237 Query: 238 GISILPALALPL 249 G +ILPA PL Sbjct: 238 GCTILPAYVAPL 249 >UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=Q21IY2_SACD2 Length = 299 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 81/286 (28%), Positives = 136/286 (47%), Gaps = 10/286 (3%) Query: 8 LKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLA 67 LK F+ VA+ SFS A + + ++Q AVS + LE L DR R+V LT+AGQ L Sbjct: 10 LKAFLAVAEHHSFSVAAQHLFITQPAVSKRIAALEQELNHILFDRLGRDVALTEAGQALL 69 Query: 68 LRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAE--SHRRYPDIQFV 125 R + +L+ ++ R ++ G +RVA S I H +P + E ++ + ++QF Sbjct: 70 PRAQAILNSMHEAQRTIREFSGEIVGTLRVATSHHIGLHHLPPILREFAANHKQVNLQFD 129 Query: 126 LHDRPQQWVMESIRQGDVDFGIV-IDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 D Q E + +GD D +V + P +L+ + +P + + LA + Sbjct: 130 FLDSEQ--AHEKVLRGDCDLAVVTLAPTLEENLEASVLWPDPLCFIVGANHPLATSKNIS 187 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPA 244 + L +L D + + L+ G+ N+ + T+ MV G+G S+LP Sbjct: 188 LEELSRTPAILPDLNTYTGRLVKHFFDTQGLALNLNMATNYLETIKMMVTVGLGWSVLPK 247 Query: 245 LALPLPEGSPLVVKRITPV-VERQLMLVRRKNRSLSTAAEALWDVV 289 + S L + I + +ERQL +V K R+L AA A ++V+ Sbjct: 248 TMV----DSSLKILPIKNIQLERQLGVVIHKKRTLGNAARAFFEVL 289 >UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Actinomycetales RepID=A4FE82_SACEN Length = 294 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 72/240 (30%), Positives = 117/240 (48%), Gaps = 1/240 (0%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+QL+ FV VA+E F+RA +R+ ++QS +S S++ LE G RL RTTR V LT AG Sbjct: 3 LRQLEYFVAVAEECHFTRAAKRLHVAQSGLSASIRSLERELGARLFHRTTRNVTLTAAGH 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 L R L ++S + L G++ + Q + +P +A +P I+ Sbjct: 63 ALLHEARRALCAVDSARDAVAAVRGLLRGELSIGTLQCLHVVDLPPVLAGFVTAHPGIEV 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGD-LQCEAILSEPFFLLCHRDSALAVEDYV 183 L + E +R G +D + P D + ++ +EP L C D +A D V Sbjct: 123 RLRQGGSGDLAEQVRAGRLDLAFAVRPARCPDGVLVHSLDTEPLVLACAGDHPMAERDRV 182 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 + L V G+R ++D LA G++ + E+ +L +VA G+GI+++P Sbjct: 183 DPRELGEQPFVDFHPDWGTRDVVDRVLAETGVERRVALEVTDVHSLLELVACGLGIALVP 242 >UniRef50_Q1IHL3 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IHL3_ACIBL Length = 306 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 74/244 (30%), Positives = 118/244 (48%), Gaps = 6/244 (2%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+ L+ FV VA+E F RA R+ L+Q +S +K+LE G L RT+R V LT AG+ Sbjct: 7 LRHLRYFVAVAEELHFGRAAARLHLAQPPLSQQIKKLEEILGYALFTRTSRAVKLTSAGE 66 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 R +R L + + + +G+ G +RV + ++P R YP + Sbjct: 67 VFLERAQRTLRHVREDMEEVRSIGRGEVGYLRVGFIGSSMLTVLPAIFGRYRRAYPKVNL 126 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 L + V+E + + +D GI+ D GP L E + SEPF + LA + + Sbjct: 127 QLQESYTSGVVEGLLKATLDAGILRDGGPTHGLTVERLYSEPFVAVLPGKHPLAKQRALS 186 Query: 185 WQALQGAKLVLQ-DYASG---SRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 +AL+ V Y+S +P+ + +G + +VQE T+ +V AG+G+S Sbjct: 187 PRALKDEPFVFYPPYSSKLAYEKPV--SICEAHGFRPKVVQEAPQWLTILRLVGAGLGVS 244 Query: 241 ILPA 244 I PA Sbjct: 245 IAPA 248 >UniRef50_Q7URH5 Probable transcription regulator n=1 Tax=Rhodopirellula baltica RepID=Q7URH5_RHOBA Length = 325 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 84/306 (27%), Positives = 142/306 (46%), Gaps = 10/306 (3%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ + L++F VA +SFS+A GL+QSAVS ++ LE G L+DR++R + LT Sbjct: 1 MSLQFRTLELFCRVADHRSFSKAAVDCGLTQSAVSQAISGLEESVGACLIDRSSRPLGLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+ + ++ + N + G++L+G V V A ++ +P+ ++P Sbjct: 61 EAGEIYLCGVRDVIRQYNELEQRVRFRGERLTGSVTVGAIYSVGLSYMPEATKVFETQHP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 D++ Q V++ + G V+FG+V P L SEP L+C D A Sbjct: 121 DVKVRTEFGSSQRVVQMVLDGGVEFGLVSFPRSTKALGTIPWQSEPMRLVCSDDHPFAKR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V L G ++V + R ID L R GI E + ++ + A G+ Sbjct: 181 TEVSASELSGMEMVGFERGLVLRQAIDQCLKRAGISVVTQMEFDNADSMVRAIQANRGLG 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVE--RQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 I+P A+ + + P ++ R L ++ R++ LS AA L +L+ Sbjct: 241 IVPEAAVRRETANGTLRVVACPEIQMVRPLGIIFRRSSKLSRAAIEL--------GSLLL 292 Query: 299 GREGDP 304 GRE +P Sbjct: 293 GREMEP 298 >UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B8DKN9_DESVM Length = 699 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 84/245 (34%), Positives = 122/245 (49%), Gaps = 4/245 (1%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+ L+ F VA+ SF RA + +QS VS + LE GVRL +R R V LT+AG+ Sbjct: 3 LRDLRTFAAVARLLSFHRAAAELNAAQSTVSARIAALETELGVRLFERLGRRVALTEAGE 62 Query: 65 QLALRLERLLD-ELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 +L +L+D E + TG +L G + V +++ A+ +P IA RR+P++ Sbjct: 63 RLVQYAAKLIDVEDEARAWVTGE--SRLRGLLTVRVPESLCAYRLPPVIAAFRRRHPEVA 120 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVI-DPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + + +RQG D V+ D GDL EA+ EP L+ LA D Sbjct: 121 LHLTACTLNGLEKDLRQGITDLAFVMADSVRGGDLNVEALGVEPLVLVAAPHHPLAARDR 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V + L G LVL R +I+ ALA GIQ E + L VA+G+GI++L Sbjct: 181 VVARDLHGITLVLSTTDCAYRTVIEEALAAEGIQPAAGLEFSSASALRGCVASGVGITLL 240 Query: 243 PALAL 247 P A+ Sbjct: 241 PEAAV 245 >UniRef50_UPI000178A8A2 transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A8A2 Length = 300 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 82/289 (28%), Positives = 128/289 (44%), Gaps = 7/289 (2%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 LKQL+ F+ + +E FSRA E++G+S VS ++ LE GV L DR + +VLTDAG Sbjct: 3 LKQLQYFMAICEELHFSRAAEKMGVSAPNVSQQIRRLEAELGVLLFDRVGKTIVLTDAGA 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 L + L + Q G + + + + + + H+ YP I Sbjct: 63 ILHEHAAAVFGHLQQAGDAIADLKQMQGGSLSIGVLPGDADLMFNALLLDFHQTYPTISL 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAI--LSEPFFLLCHRDSALAVEDY 182 L + + V E + +D G+ I GPV D + +I E F L HRD LA E++ Sbjct: 123 SLLETMK--VTEQVLDRSIDIGVTI--GPVIDERLTSIPLFHEEFSLAVHRDDPLAGENF 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 +P L+ +V+ R LID NG ++L MV +G+G +L Sbjct: 179 IPLNRLRSMNMVMFPPDHQCRKLIDRFCMDNGFAVQPHMVTTTLSSLLQMVQSGVGACVL 238 Query: 243 PALALPLPEGSPL-VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 P L L + + VV P + + L+ R +R + A +R Sbjct: 239 PRLLLDNLRNTEIKVVHLRNPTPSQDICLIYRSDRFMGYAMRTFIKNLR 287 >UniRef50_B8FI63 Transcriptional regulator, LysR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FI63_DESAA Length = 304 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 83/300 (27%), Positives = 141/300 (47%), Gaps = 11/300 (3%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L QL +F V + SFS+A + + LSQ VS +K+LE+H RL+DR R+ T G+ Sbjct: 3 LWQLHIFTKVVELGSFSKAAQAVNLSQPTVSSHIKDLEDHLNCRLIDRLGRKASPTKGGE 62 Query: 65 QL---ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 L A RL L DE S + + +G+ +G + +A S +++P+ I + YPD Sbjct: 63 LLYSFATRLLALRDEAQSAM--SSFLGKP-TGSLAIAGSNIPGCYVLPKVIGAFSKYYPD 119 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + L + V E + G V+ G+V P L + ++ + L+ LA ++ Sbjct: 120 VSISLKIGDTRSVSEDVIAGTVEMGVVGALSPNKQLTQDKLMDDHLTLIVPASHPLAEKE 179 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGI---QANIVQEIGHPATLFPMVAAGIG 238 V +++ A ++++ SG+R + LA GI NI ++G + + AG+G Sbjct: 180 AVSIKSIADAPFIIREQGSGTRKFFEKVLADAGIGLDSLNISGQLGSTEAVREAIKAGLG 239 Query: 239 ISILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 +SI A+ L GS ++ R LVR + R+ S + D + + L Sbjct: 240 VSIFSTRAVLGDLRCGSLKSIEISDLDFRRSFYLVRHRQRTASPLCQYFCDFLTANAHDL 299 >UniRef50_A5EJ00 Transcriptional regulator, LysR family n=2 Tax=Bradyrhizobium RepID=A5EJ00_BRASB Length = 300 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 76/294 (25%), Positives = 145/294 (49%), Gaps = 4/294 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M SL+QL+ V V + S ++A + ++QSA+S ++++E + ++L DRTTR + T Sbjct: 1 MPPSLRQLEALVLVYRLGSITKAAAEMRVTQSAISLLIRQIEENFQLKLFDRTTRALHPT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 A ++ + ER+L R + + +G++ +A S +++ L+P+ + R+P Sbjct: 61 AACREAIMAAERILAGAQGLSRRMRDLAEIKAGRISIAVSAGVASALLPRVFSTFRSRHP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGI--VIDPGPVGDLQCEAILSEPFFLLCHRDSALA 178 ++ L D ++ + G +FG+ V D G V + + E ++ P + +D Sbjct: 121 EVSIDLLDVAPDELLAVVMDGRAEFGLGSVEDEG-VPEARVETLMRSPLSAIGIKDGEFE 179 Query: 179 VEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 + + W + A +++ + + R ID ALA+ G E+ T + A G G Sbjct: 180 QQRRLTWDGIMSADVIMMRHGTRIRRQIDEALAQTGRALKPAWEVSLITTALALTAEGAG 239 Query: 239 ISILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 ISILP LP + L ++ P + R + L+ R + LS AA+ ++ +D Sbjct: 240 ISILPGHMLPKAQFPTLAAVPLSQPTIYRHVSLLSRADFGLSPAAQRFVEIAKD 293 >UniRef50_Q65GU9 Transcriptional regulator YbbE n=2 Tax=Bacillus subtilis group RepID=Q65GU9_BACLD Length = 299 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 80/289 (27%), Positives = 141/289 (48%), Gaps = 9/289 (3%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L Q+ F+ V++ K F++A +SQ A+S S+K+LE GV L R T+ + LT G+ Sbjct: 3 LYQIDHFIAVSRHKHFTKAALEQRISQPALSRSIKKLEEELGVPLFIRKTKSIRLTKYGE 62 Query: 65 QLALRLERL---LDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 Q ++ ++ LDE +R++ +G++ V+ T+ + L+PQ IAE ++YP+ Sbjct: 63 QFLIKAKQARLALDEGVQQIRESVNPN---AGEISVSFLHTLGSRLMPQLIAEFKKKYPN 119 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + F L+ + + + G+ D + P P L+ + +EP +L+ D LA Sbjct: 120 VAFRLYQAANEHLQHMVETGEADICLSSPPLPNEHLEWTVLDTEPLYLVLPADHPLADRK 179 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V +++ V G R + D I + E +T+ +V+AG+G++I Sbjct: 180 EVAIRSIAHEDFVCFKPGYGLRYVFDQMCRGLSISPKLAFEGEEVSTILGLVSAGLGVAI 239 Query: 242 LPALALPLPEGSPLVVKRITPV-VERQLMLVRRKNRSLSTAAEALWDVV 289 LP A + SP+ R++ ER + L K+ LS AA + V Sbjct: 240 LPKTAEHV--HSPVAFCRVSDYRSERTIGLAVLKDHYLSPAARNFKEFV 286 >UniRef50_Q67PU0 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67PU0_SYMTH Length = 299 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 70/244 (28%), Positives = 120/244 (49%), Gaps = 2/244 (0%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+ L F V + F+RAG +GLSQ AV+ V LE G LLDR+ R++ LT AG+ Sbjct: 3 LQHLITFCRVVETGGFARAGALVGLSQPAVTRQVAALEAELGTPLLDRSGRQIHLTPAGR 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 + R R++ +N+ + + G++ + A T+ L+P +A R +P I+ Sbjct: 63 LVYERARRIITAVNTLKEEVADLAHPERGRIAIGAVTTVGLRLLPPILAAFKREHPGIRV 122 Query: 125 -VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 V DR Q+ + + + +G+++ I+ P L+ ++ +P L+C + D + Sbjct: 123 HVKADRTQETI-QRLLEGEIELAILPTPVTHPRLRSVPLVEDPVVLVCAPGRRSELPDPL 181 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 P L L+ S R +DA L + G+ N+ E + MV AG G +++P Sbjct: 182 PLAKLGEIDLISFQAPSRFRTFVDAMLEQAGVYPNVTMEFDSHEAVTLMVEAGFGCALVP 241 Query: 244 ALAL 247 A A+ Sbjct: 242 ASAV 245 >UniRef50_D2R7I4 Transcriptional regulator, LysR family n=6 Tax=Planctomycetaceae RepID=D2R7I4_9PLAN Length = 288 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 85/297 (28%), Positives = 145/297 (48%), Gaps = 15/297 (5%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L QL+ F+ VAQ +F+RA E + +SQ A+S S+++LE G + +R TR V+LTDAG Sbjct: 3 LDQLRYFLKVAQRGNFTRAAEELMISQPALSRSIQKLEEELGQPVFERKTRSVLLTDAGT 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 L R +++L L T + GQ G+VRV A TI+ + +P+ + ++P Sbjct: 63 LLQARSQQVLTILEDTKSEITDDGQ--CGRVRVGAIPTIAPYFLPEVLQRFSAKFPKANL 120 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 ++ + +++S RQG++D I++ P P L+ E + E L+ AL +D + Sbjct: 121 IVQENTTDVLIKSCRQGEIDLAILVLPVPAKYLEVEELFEEELLLVLPPHHALVEKDKIR 180 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPA 244 ++ VL D A I + + Q +V+ + +V+ GIS++PA Sbjct: 181 VADVEPFPFVLLDEAHCLSDNIVSFCRQRSFQPVVVERTSQLTMVQELVSLAHGISLIPA 240 Query: 245 LALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGRE 301 +A + V + T R+ R+++ A W+ R Q L+A RE Sbjct: 241 MARQCDQSQRRVYRSFTG---------RKPTRTVAVA----WNPYRFQSRLLVAFRE 284 >UniRef50_C8VWS6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWS6_DESAS Length = 300 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 75/299 (25%), Positives = 144/299 (48%), Gaps = 7/299 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN++ L+ FVTV + S S+A + + ++Q AVS + LE+H G++LL+R R++V T Sbjct: 1 MNFNF--LQTFVTVIEFNSISKAAKALNITQPAVSKQIASLEDHFGIKLLERLGRKMVPT 58 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG +L + +L+ L ++ M ++ G + + AS +++P+ I ++YP Sbjct: 59 EAGNRLNRHAKIILNSLQQAEKEINEMISEVRGNLVIGASTIPGQYILPKIIGLFKKQYP 118 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ VL V+E + + ++ G + + + + L+ + A Sbjct: 119 QVKTVLEISDSGKVIEKLLEHEIHLGAIGTKVLHDKIASIKLSDDELVLITPLEHPFATR 178 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQAN---IVQEIGHPATLFPMVAAGI 237 V L G ++V ++ SG+R ++ L G+ N I E G ++ V AG+ Sbjct: 179 KTVKAVELAGEQMVWRESDSGTRHAVEEKLTAKGLNVNNLIITAEFGSTESIIGAVEAGM 238 Query: 238 GISILPALALPLPEG-SPLVVKRITPVV-ERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 GIS + A+P E + V R+ +V +R L ++ K + + AE + + N Sbjct: 239 GISFVSHWAVPENEYRRNIAVLRLEDIVLDRNLYIIYPKRKYFNRTAETFINFLHQLDN 297 >UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHG4_MOOTA Length = 302 Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 87/296 (29%), Positives = 151/296 (51%), Gaps = 9/296 (3%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 ++ L F+T ++ + S A E + L+Q AVS ++ LE++ G+RLL+R REV LT AG Sbjct: 2 NINHLITFITTVEKGTLSAAAEELHLTQPAVSKQLQALEDYFGLRLLERRGREVRLTAAG 61 Query: 64 QQLALRLERLL-DELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 + + R R++ LN T R+ + Q + G++ + AS T +++P+ I R YP + Sbjct: 62 E-ICYRHARIIASHLNQTRRELAELTQLVRGRLLLGASTTPGQYILPRLIGAFRREYPRV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDF-GIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + +L Q V++ +++G++D + G +L + + L+ LA Sbjct: 121 EVILTIADTQEVVQRLQEGEIDLGVVGAAGGRGKNLSYSRLAGDELVLIVPPGHRLAGAT 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQAN---IVQEIGHPATLFPMVAAGIG 238 + L+ LV ++ SG+R +++ LA G + IV E+G + V AG+G Sbjct: 181 AISPGELKEEPLVWRESGSGTRRVVEERLAAAGFTVDPEQIVMELGSTEAIVSAVEAGLG 240 Query: 239 ISILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 IS++ + A+ + G VV ++R L LVRR+ LS AAEA + D Sbjct: 241 ISLVTSWAVEKSVKLGRLAVVTLQGVDLKRDLYLVRRRQ-PLSPAAEAFVNFAADH 295 >UniRef50_A0KPQ5 Transcriptional regulator n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KPQ5_AERHH Length = 307 Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 78/299 (26%), Positives = 136/299 (45%), Gaps = 10/299 (3%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN++ +Q++ FV VA S SRA + +SQSAV+ +++ELE G L +R R V LT Sbjct: 1 MNFTFRQIRYFVAVADSFSVSRAAAELHISQSAVTSAIRELETELGAALFERNPRGVSLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G Q L R+L + + + QQ G++ + + ++ + + + + R +P Sbjct: 61 TQGHQFLLHARRILGAMTEAGQSLKAVAQQDQGRLTIGVTTLVAGYYLSEALGRFRRAFP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGD--LQCEAILSEPFFLLCHRDSALA 178 +Q + + Q ++ I G+VD GI++ + E + P + + L Sbjct: 121 AVQIEVKEDEQPYLEHQIVNGEVDVGILMTNRTIRQEAFDTELLTRSPLRVWLAANHPLC 180 Query: 179 VEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 E + +AL G + ++ A +I L R GI IV + +VA+ +G Sbjct: 181 AESTLSLKAL-GEEPMISLTADQLDQIIGGGLRRYGIAPRIVLRTASVEAVRSLVASQLG 239 Query: 239 ISILPALA-----LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 +++LP A L +K P ++ + LV R+ L A D+VRDQ Sbjct: 240 LALLPDFAYRPWSLEQERVEARAIKEPIPAID--IGLVWRRGSRLEWTAREFIDIVRDQ 296 >UniRef50_C7RPQ0 Transcriptional regulator, LysR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RPQ0_9PROT Length = 303 Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 81/291 (27%), Positives = 141/291 (48%), Gaps = 5/291 (1%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N +++QL++F A SF+RA E++ L+ +A+S +K+LE+ +G L +R + V LT+ Sbjct: 3 NATIRQLQIFSVAASHLSFARAAEKLHLTHAAISLQIKQLEDVSGALLFERIGKRVFLTE 62 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 AG+ L ++L L + G++ VA + T + + P +AE + D Sbjct: 63 AGEILLDHTRQILQSLKEADEALLALKGLRGGRIAVAVAST-AEYFAPGLLAEFRKVQAD 121 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 ++ L + V + +VD I+ P D A P ++ LA + Sbjct: 122 VRIRLLIDNRDTVTRLLVGNEVDLAIMGRPPAELDATAVAFAPHPLVIVASAAHPLAGQA 181 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V + L G L++++ SG+R ++ I+ I E+G + V AG+GIS Sbjct: 182 NVAVEDLAGETLIVRETGSGTRSAMEEFFQERSIKPRIGMEMGSNEAIKQAVVAGLGISF 241 Query: 242 LPALALPLP-EGSPLVVKRI--TPVVERQLMLVRRKNRSLSTAAEALWDVV 289 + L L + LV+ ++ TPV+ R+ +VR KN+ L+ A A WD V Sbjct: 242 ISQHTLGLELSAARLVILKVEGTPVI-RRWHIVRHKNKHLTPALGAFWDFV 291 >UniRef50_C1M4D9 Putative uncharacterized protein n=2 Tax=Citrobacter RepID=C1M4D9_9ENTR Length = 302 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 120/249 (48%), Gaps = 7/249 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN L+ L+ FV VA+E F RA R+ +SQ +S ++ LE G RLL RT R V LT Sbjct: 1 MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQILEQQVGARLLARTNRSVALT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQT---ISAHLIPQCIAESHR 117 AG+Q ++L +N R+ +G++R+ + + I A + ++ + Sbjct: 61 SAGKQFLADSRQILGLVNEAAARAERLHLGEAGELRIGFTSSAPFIKA--VSDTLSLFRQ 118 Query: 118 RYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSAL 177 YP + + + + + +G +D G++ + L+ E IL EP + R L Sbjct: 119 SYPAVHMQTREMNTREQIAPLNEGTLDLGLLRNTQLPETLEREIILHEPLMAMIPRAHPL 178 Query: 178 AVEDYVPWQALQGAKLVLQDYASGSRPLID--AALARNGIQANIVQEIGHPATLFPMVAA 235 A + V L V D G+ D + R G++ I QE+G T+ +VAA Sbjct: 179 AQKPVVTLAELANEPFVFFDPHVGTGLYDDILGLMRRYGLKPTIAQEVGEAMTIIGLVAA 238 Query: 236 GIGISILPA 244 G+G+SILPA Sbjct: 239 GLGVSILPA 247 >UniRef50_B2TBU4 Transcriptional regulator, LysR family n=12 Tax=Burkholderiales RepID=B2TBU4_BURPP Length = 313 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 83/291 (28%), Positives = 138/291 (47%), Gaps = 9/291 (3%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +++Q + F+ + S A +R+GL+ SAVS + +LE G RL DRTTR V L+ AG Sbjct: 7 TIRQFEAFLAIVDLHSIGAAADRLGLTSSAVSQLLADLETELGFRLFDRTTRRVNLSSAG 66 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 Q E +L + + + + + +G VR+ A ++A +P IAE R P + Sbjct: 67 QDFLASAESVLRHVRAAAQSADDIRNRAAGIVRIGAPLVLAATALPAAIAEYARDKPKVV 126 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 + D + ++E + GDVD I D ++C+ + P+ + C L V Sbjct: 127 VRICDTVVEQLVERVESGDVDLAIGPDRPSGTRVRCDPAFASPWVMWCAPTHPLNARRRV 186 Query: 184 PWQALQGAKLVL--QDYASGSRPLIDAALARNGIQANI--VQEIGHPATLFPMVAAGIGI 239 WQ L+ +V +D+ + LA +A I V + + T F + + G+ I Sbjct: 187 QWQHLRDVPIVATGRDHERA----VGQMLANLPAEARIIPVDVVDNVTTAFGLASQGLAI 242 Query: 240 SILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVV 289 ++ PA PL LV+KRI P R++ + R R+LS A+ D + Sbjct: 243 TLAPAYVAPLARTFGLVMKRIVDPETIREVCVYRSTERALSPPADGFADFI 293 >UniRef50_B0A6J5 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6J5_9CLOT Length = 292 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 72/289 (24%), Positives = 145/289 (50%), Gaps = 6/289 (2%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 +KQL F+T+ +E + ++A +++ +SQ +S+ +K LE GV+L++R +R+V LTD G Sbjct: 3 IKQLINFITIVEEGNITKAAQKLHISQPPLSNQLKALEAELGVKLIERGSRKVTLTDVGN 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 L R + +++ STL + + G +++ A T + + + I+ ++YP ++F Sbjct: 63 LLYKRGKDMVNVFESTLNEVEDFKSGIEGVLKIGAVSTCNQFIPNELISPYAKQYPKVKF 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDS---ALAVED 181 L++ V++ I +G VD G+V P +L C + +EP ++ +++ + Sbjct: 123 ELYEGNTYEVVDMIERGIVDIGVVRTPFNSENLCCLNLRTEPMVVVVNKNGEKFGFEYRE 182 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + + L G +V+ Y + ++D L N ++ANI T AG+ I I Sbjct: 183 KIESKDLDGKPIVI--YRRYEKLIMD-VLQLNKVKANIYCLNDDSRTTIAWAQAGLAIGI 239 Query: 242 LPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 +P + V + ++ Q+ + +N+ L +A L D++R Sbjct: 240 VPKSIIDNSNKEIEVYELDEEELKTQISVAWMENKYLPRSARNLLDMIR 288 >UniRef50_A8RPQ8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RPQ8_9CLOT Length = 296 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 77/302 (25%), Positives = 142/302 (47%), Gaps = 20/302 (6%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 + + LK+FVTV + S + A ++ ++Q ++S ++ E+E++ GV+L DR +R++ LT+ G Sbjct: 2 TFRHLKIFVTVCETGSMTAAASQLFIAQPSISLAISEMEDYYGVKLFDRISRKLYLTENG 61 Query: 64 Q---QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 + Q A + LLDE+ +RD M G+++V S TI +L+P I + ++YP Sbjct: 62 RRALQYARHIIDLLDEMEQGVRDVDAM-----GRLKVGTSITIGTYLLPGYIKKLKQQYP 116 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPF-----FLLCHRDS 175 ++ + + I D+D GI+ G ILSE F +C Sbjct: 117 ALKVEASIANSGTIEQQILDNDIDVGII-----EGVAHSPFILSESFAGDRLVFICPAGH 171 Query: 176 ALAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAA 235 A + ++ +L++ S R + D LA + + + + V A Sbjct: 172 EFAGKTLEELSEVRNQDFILREKGSAGREIFDGILAAQELNVRPIWQSASNQVILQGVKA 231 Query: 236 GIGISILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQG 293 G+GISILP + + EG + + R+ ++ KN+ L +A L ++ ++ Sbjct: 232 GLGISILPYFLVRQDIREGELAEFRIKDLALNRKYSVIYHKNKFLPRSARTLMELCKEGN 291 Query: 294 NA 295 A Sbjct: 292 GA 293 >UniRef50_A5WHD9 Transcriptional regulator, LysR family n=4 Tax=Gammaproteobacteria RepID=A5WHD9_PSYWF Length = 303 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 64/246 (26%), Positives = 123/246 (50%), Gaps = 4/246 (1%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +L+QL+ + VA+ + F RA E +SQSA+S + ELE ++ +R ++V++T G Sbjct: 3 TLRQLEFAIAVAKHRHFKRAAEECNISQSALSLGIAELEKQLDTQIFERNNKQVLITPIG 62 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 +++ +R +R+ E+N L+ + V TI+ +L+P+ + E +YP+ + Sbjct: 63 EEILIRAQRVFSEINDLTTRAHSHQTPLAYPMTVGMIPTIAPYLLPKVLPELKAQYPNFR 122 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 + ++ + ++E +R G +D I+ P V L E FF + +D+ +A D + Sbjct: 123 MTVVEQQTERLLEQVRYGHIDTAIIALPYAVDGLHTFEFWQEDFFAIFPQDNPMATLDTI 182 Query: 184 PWQALQGAKLVL--QDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 L A L+L + + L + R+ ++N TL M AG+G ++ Sbjct: 183 SADELGDANLMLLGEGHCLTDHALSVCSFDRDEFKSNFSD--ASLNTLIQMALAGMGTTL 240 Query: 242 LPALAL 247 +P +AL Sbjct: 241 IPEMAL 246 >UniRef50_D2QVQ4 Transcriptional regulator, LysR family n=22 Tax=Bacteroidetes RepID=D2QVQ4_9SPHI Length = 298 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 75/294 (25%), Positives = 143/294 (48%), Gaps = 6/294 (2%) Query: 7 QLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQL 66 +L VF TVA+ SF++A + ++Q A++ ++ELE+ G L DR ++ LT AG L Sbjct: 5 RLTVFYTVARRLSFTKAAAELFVTQPAITKHIQELESQLGTALFDRRGNQISLTTAGNVL 64 Query: 67 ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVL 126 E ++ D + + G++R+ AS TI+ ++IP +A ++PD+ L Sbjct: 65 LRHAETIMGVYRQIEFDLNELKGKPGGRLRLGASSTIAQYVIPAVLARFGEQFPDVTLSL 124 Query: 127 HDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQ 186 + + +++ ++D G+V D++ + + L+C D LA D + Sbjct: 125 LSGNTEQIEQALLHDEIDLGLVEGRTHHSDVRYTPFVKDELVLVCRADHPLAGRDEITLD 184 Query: 187 ALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQ---EIGHPATLFPMVAAGIGISILP 243 L+ LVL++ SGSR +++ AL G++ +Q ++G + +++ G++ + Sbjct: 185 ELKTVPLVLREPGSGSREVVEHALRGAGLRLAELQQAMQLGSTEGIKTYLSSSSGMAFVS 244 Query: 244 ALALP--LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 A+P L G+ V+ +ER ++ + S A+ VR Q NA Sbjct: 245 IFAVPNELKSGTLRVLDVADLTIERDFYAIQLQGMS-EGLADTFMRFVRRQYNA 297 >UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CY97_PAESJ Length = 305 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 80/305 (26%), Positives = 145/305 (47%), Gaps = 9/305 (2%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 L+QL FV VA+++ ++A E + ++QSAVS + +LE GV+L + R + LT G Sbjct: 2 ELRQLYYFVKVAKKEHVTQAAEELHVAQSAVSRQIHQLEEELGVKLFLQKGRNLQLTPVG 61 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 Q R E +LD+L + + G++R+ ++ ++PQ +A + +P+++ Sbjct: 62 QLFLKRAEVILDDLERAVVEIHEFMDPEKGEIRLGFPHSLGVSVVPQVVAAFRKLHPNVK 121 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQC--EAILSEPFFLLCHRDSALAVED 181 F ++ + +G++D I P P Q E +L+E F + LA E Sbjct: 122 FRFRQGMYPSLIRDMVKGEIDLAF-ISPFPDEHEQVCGEVLLTEELFAILPPSHPLAGEQ 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + L+ V+ RP++ A G I E T+ +VAAG+G+S+ Sbjct: 181 EIDLIQLKEDTFVMFSEGYSLRPIVWEACQEAGFTPKIGFEGEETETIRGLVAAGMGVSL 240 Query: 242 LPALAL---PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 LP +AL + + + + V+ TP V R + ++ R N + A+ + N L Sbjct: 241 LPEMALYHAGVLQSAKVRVR--TPNVTRNIGIIHRSNEKMPLVAKVFHGFLLRYFNEL-E 297 Query: 299 GREGD 303 G++G+ Sbjct: 298 GKQGN 302 >UniRef50_Q48IW5 Transcriptional regulator, LysR family n=8 Tax=Pseudomonas RepID=Q48IW5_PSE14 Length = 299 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/248 (28%), Positives = 120/248 (48%), Gaps = 6/248 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + L QL+ F TVA E +F RA ER+ ++Q +S ++ +E++ GV L R+TR V LT A Sbjct: 2 FELSQLRCFTTVATELNFRRAAERLNMTQPPLSRQIQIMEHNLGVELFTRSTRSVALTAA 61 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + + LL+ R + G V ++ + +P+ IAE+ + P + Sbjct: 62 GRAFFIEAQTLLERAQQAAISARRFAEGDIGSVTISFVGSAVYEFLPRVIAEARLKQPQV 121 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L + E++R +D GIV P + E ++ EPF L + LA D Sbjct: 122 KISLTEMNTYQQHEALRARRIDLGIVRAPLFQPGYESECLVREPFVLAVPGNHRLAHADS 181 Query: 183 VPWQALQGAKLVLQDYASGSRP----LIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 V L+GA ++ Y+ + P L+ + VQ +G T+ +V AG+G Sbjct: 182 VTVADLEGAPFLM--YSHSAYPPFNELLTGMFRSARVAPEYVQWLGSSLTILALVNAGMG 239 Query: 239 ISILPALA 246 ++++P A Sbjct: 240 LALVPRCA 247 >UniRef50_B4UJ91 Transcriptional regulator, LysR family n=3 Tax=Anaeromyxobacter RepID=B4UJ91_ANASK Length = 311 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 92/303 (30%), Positives = 151/303 (49%), Gaps = 19/303 (6%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 + L QL++ VA+E+SF+RA ER+ +Q AVS +++ LE G L+DR++R+ LT Sbjct: 10 VRMDLAQLELLAAVAEERSFTRAAERLRRTQPAVSQALRRLEEEVGATLVDRSSRDASLT 69 Query: 61 DAGQQL------ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAE 114 G+ L L+L R E LRD R G V VAA++ + HL+P +AE Sbjct: 70 AEGEVLHDYARRMLKLRRDAGEALEALRDLQR------GTVAVAANEYTATHLLP-VLAE 122 Query: 115 SHRRYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRD 174 RR+P ++ +H + + ++ DV+ G+V L + I ++ LL + Sbjct: 123 FRRRHPRLRVEVHRALARDIPTAVLGRDVELGVVTYRPTQPGLVAQQIATDDLVLLVPPE 182 Query: 175 SALAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVA 234 LA V + L G + S +R + + AR+ +IV E+ + +V Sbjct: 183 HPLARRGTVSIRQLGGESFLAHHVRSPNRERVVKSFARHRTPLDIVMELPTLDAVKRLVV 242 Query: 235 AGIGISILPA-LALP-LPEGS--PLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 +G++++PA +A P L G L V+ + R ++LV R++ LS AAEAL + R Sbjct: 243 ERVGVALMPARVAGPELARGELVGLTVREMR--FPRPVLLVHRRDAPLSRAAEALLECAR 300 Query: 291 DQG 293 G Sbjct: 301 AAG 303 >UniRef50_B5XVV4 Transcriptional regulator cynR n=5 Tax=Enterobacteriaceae RepID=B5XVV4_KLEP3 Length = 313 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 80/307 (26%), Positives = 151/307 (49%), Gaps = 10/307 (3%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+ L F+ VA+ + F+RA + +SQ A+S +++LE V+L DR+ R LTDAG+ Sbjct: 3 LRHLSYFIAVAEHRGFTRAAAALHVSQPALSQQIRQLEAMLEVQLFDRSGRYTRLTDAGE 62 Query: 65 ---QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 + A R+ R L+E L D + + GK+R+A + T + +++ + +RRYP Sbjct: 63 IWLEYARRVLRDLEEGRRALHDAEDLQR---GKLRIAMTPTFTTYVLGPLVEAYYRRYPG 119 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 ++ ++ + Q+ + + + ++D GI D D+ + +L+E L+ R LA E Sbjct: 120 VKLLIQEMNQERMETMLLEDELDVGIAFDESLSRDIVVQPLLTETLALVVSRAHPLAHES 179 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 ++ QAL L+L +R ID R+ ++ ++ E + ++ + ++ Sbjct: 180 HLQLQALDAQPLILLSSEFATREQIDRYCRRHRLEPDVRMEANSIGAVLTVIRGTLLATL 239 Query: 242 LPALALPLPEGSPLVVKRITP-VVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 LPA + LV + P +++R L++R+ S AA + R+ A + Sbjct: 240 LPAAI--AGQYDDLVAIELKPALLQRTACLLQRQGAWQSAAAREFIALAREIA-ATLEQE 296 Query: 301 EGDPLYQ 307 G LY+ Sbjct: 297 NGQALYE 303 >UniRef50_Q4KHB2 Transcriptional regulator, LysR family n=28 Tax=Proteobacteria RepID=Q4KHB2_PSEF5 Length = 308 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 80/294 (27%), Positives = 140/294 (47%), Gaps = 8/294 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M ++L+QL+VFV VAQ++S SRA + LSQSA S S+ ELE + +L DR + + L Sbjct: 1 MRFTLRQLQVFVAVAQQESVSRAAGLLSLSQSAASTSITELERQSSCQLFDRAGKRLSLN 60 Query: 61 DAGQQLALRLERLLDELNSTLRD--TGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRR 118 G+QL + LLD+ + D G+ G G + V A+ TI +L I + Sbjct: 61 ALGKQLLPQAVALLDQAKE-IEDLLNGKSG---FGSLSVGATLTIGNYLATLLIGSFMQV 116 Query: 119 YPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALA 178 +P+ Q LH + +++ + ++D G++ D++ + + + + C LA Sbjct: 117 HPESQVKLHVQNTAHIVQQVAHYEIDLGLIEGDCSHPDIEVQTWVEDELVVFCAPQHPLA 176 Query: 179 VEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 + + L +L++ SG+R D A+ + NI E+ H + V +G+G Sbjct: 177 KRGHATMEELTHEAWILREQGSGTRLTFDQAMRHHRSALNIRLELEHTEAIKRAVESGLG 236 Query: 239 ISILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 I + LAL GS + V+ + RQ + K + ++A ++ R Sbjct: 237 IGCISRLALRDAFRRGSLVPVETPGLDLARQFYFIWHKQKYQTSAMREFLELCR 290 >UniRef50_B6R6F6 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R6F6_9RHOB Length = 320 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 80/285 (28%), Positives = 144/285 (50%), Gaps = 3/285 (1%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +LKQL+ F T+A+ SFS+A E ++QS +S S+K+LE G LLDR+ R +VLT+AG Sbjct: 10 TLKQLQYFKTLAKHLSFSKAAEACFITQSTLSASIKQLEGILGCELLDRSGRTLVLTEAG 69 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 + + + LL + ++ + L G+ R+ +++ L+P+ + + YP++Q Sbjct: 70 ESVLEKASLLLRDAEDLVQGVQAQNKPLCGRFRLGVIPSVAPFLLPRFLPQLRDLYPELQ 129 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 L + + +M ++R+G +D ++ P + I S+ F+L LA V Sbjct: 130 LFLREDISRNLMIALREGRIDAALMALPYDTTGFESAEIGSDAFYLAVPGAHPLAGLSEV 189 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 + L L+L + R + AA + AN + +TL MV GIG++++P Sbjct: 190 LMEDLANEVLLLLEDGHCLRNHVLAAAGGRMLTANEDVQATSLSTLVQMVDNGIGVTLVP 249 Query: 244 ALAL--PLPEGSPL-VVKRITPVVERQLMLVRRKNRSLSTAAEAL 285 +A+ + G+ L ++K P R + +V R+ S A+ L Sbjct: 250 RIAVDADIDRGTSLKLIKIADPKARRTIGMVWRRKSSFEGNAKLL 294 >UniRef50_A0Y7Z6 Probable transcriptional regulator n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y7Z6_9GAMM Length = 297 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/215 (27%), Positives = 115/215 (53%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN S+KQL+ F+ +A+ SF+ A ER+ +SQ A+S ++ +LE+ G L +R+TR V LT Sbjct: 1 MNVSIKQLRGFIAIAETGSFAEASERLYISQPALSIAIGKLEDTVGGLLFNRSTRSVQLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G + +RL+ + + D R+ GK+ VAA + ++ +P +AE +++P Sbjct: 61 PEGLEFLPIAQRLIADWSEAFDDLNRLFSLKRGKLTVAAMPSFASTRLPAIVAEYQQQFP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +I + D + +++++ G D GI +P + Q E++ ++ F + AL+ Sbjct: 121 NITIAVQDIVMEQAIDAVQTGRADLGITFEPDNLQGQQFESLFTDRFVAVIPMSHALSGR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGI 215 + ++ L L++ + S +R D + + G+ Sbjct: 181 TKIQFRQLLNDTLIVLNRGSSTRRWTDQLIQKTGV 215 >UniRef50_Q1GX89 Transcriptional regulator, LysR family n=13 Tax=Proteobacteria RepID=Q1GX89_METFK Length = 330 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 86/305 (28%), Positives = 149/305 (48%), Gaps = 31/305 (10%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N +L +LK V VA+E++F RA E+ +SQ A+S +VK+LE GV + +R+ R+V T Sbjct: 28 NMTLSELKFIVAVAKERNFRRAAEKCFVSQPALSLAVKKLEEELGVTIFERSHRDVATTP 87 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMG-QQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+Q+ + R L+E + +++ RMG QL+G ++ + +L+P+ I R P Sbjct: 88 IGEQIIAQAIRTLEE-SDRIKEIARMGNNQLAGPFKLGVIYSTGPYLLPEIIPALRRLAP 146 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ + + + +R +D I+ P V ++CE + E F +AV Sbjct: 147 EMPLEVEENLTANLETQLRNRVIDAAIIALPFDVPGVRCEPLYDESF--------VVAVP 198 Query: 181 DYVPW--------QALQGAKLVLQDYA---SGSRPLIDAALARNG--IQANIVQEIGHPA 227 D PW + L K++L + S L L+R+G +Q N ++ I + Sbjct: 199 DIHPWAERKEIRAEELADEKVLLLNSGHCFSNQVVLACPELSRHGEVLQGNSLETIRN-- 256 Query: 228 TLFPMVAAGIGISILPALALPLPEGSPLV--VKRITPVVERQLMLVRRKNRSLSTAAEAL 285 MVA+ +GI++LP A +PL+ + PV R++ L RK + A + L Sbjct: 257 ----MVASNLGITVLPCSAAAGRYQNPLIRTIPFADPVPTRRIALAWRKGYTREKAIDCL 312 Query: 286 WDVVR 290 +R Sbjct: 313 LQAIR 317 >UniRef50_A9F7Y4 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F7Y4_SORC5 Length = 327 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 3/241 (1%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+ L+ F VA+E+ F RA +R+G++Q +S +++LE+ G L DR+ R V LT AG Sbjct: 3 LRHLRYFTAVAEERHFGRAAQRLGIAQPPLSRQIQDLESELGFSLFDRSRRRVELTPAGA 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 L + R+ D L + + R +G++ V +++ I + + P ++ Sbjct: 63 VLLAHVRRVFDALELAVHEARRASVGETGRLVVGYLSSLAYSGITELVRTFRGELPAVEL 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 L + P Q +E+++ G +D G V P L E + EP + D LA +P Sbjct: 123 ALREMPPQEQIEALKDGRIDVGFVRAPLHDARLASECVRREPLLVALPADHPLAARKRIP 182 Query: 185 WQALQGAKLVLQDYASGSR--PLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L V+ GS L+ G I QE H + +VAAG G+SIL Sbjct: 183 LELLSREPFVVFPRQRGSAFFDLVMGLCRAAGFSPRIAQEALH-LDILSLVAAGFGVSIL 241 Query: 243 P 243 P Sbjct: 242 P 242 >UniRef50_C5ALH3 Transcriptional regulator, LysR family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5ALH3_BURGB Length = 302 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 75/240 (31%), Positives = 114/240 (47%), Gaps = 1/240 (0%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+QL+ FV VA+E +F+RA ER + QSA+S S++ LE G RLL RTTR V L+ AG Sbjct: 3 LRQLRHFVAVAEEANFTRAAERCHIVQSALSTSIRLLEEELGARLLVRTTRRVSLSAAGA 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHL-IPQCIAESHRRYPDIQ 123 R LD L+ + + GK+ + Q++ L +P ++ + +P ++ Sbjct: 63 VFLDSARRALDILDRAGLEVADITSVRRGKLSIGTVQSLPQFLELPALLSRFYHAHPGVE 122 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 L + E + ++D I+ L I + L C RD LA V Sbjct: 123 VRLVQGGAAELNEKVDARELDLAILPIEERNERLASHVIACDEMVLACRRDHPLAASGQV 182 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 P L V G+R L+D A G+Q + EIG TL +V G+G+++LP Sbjct: 183 PLSRLTKQAFVDFVPGQGTRRLVDRGFAEAGLQRRVAFEIGDLDTLLELVRQGLGVALLP 242 >UniRef50_P0ACQ6 Hydrogen peroxide-inducible genes activator n=273 Tax=cellular organisms RepID=OXYR_ECO57 Length = 305 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 4/290 (1%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +++ L+ V +A+ + F RA + +SQ +S +++LE+ GV LL+RT+R+V+ T AG Sbjct: 2 NIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQAG 61 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 L + +L E+ + G+ +SG + + T+ +L+P I H+ +P ++ Sbjct: 62 MLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKLE 121 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 LH+ ++ + G +D I+ + EP L + D A + V Sbjct: 122 MYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPLFDEPMLLAIYEDHPWANRECV 181 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 P L G KL++ + R G + TL MVAAG GI++LP Sbjct: 182 PMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLLP 241 Query: 244 ALALPLPE---GSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 ALA+P PE + + I P R + LV R L + E L + +R Sbjct: 242 ALAVP-PERKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIR 290 >UniRef50_B6FW03 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FW03_9CLOT Length = 296 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 72/290 (24%), Positives = 139/290 (47%), Gaps = 3/290 (1%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTRE--VVLTDA 62 L++LK F+ V + K+F++A E + LSQ +VS +K LEN+ G +L+DR+ R+ + +T+ Sbjct: 2 LEELKTFIAVVEIKNFTKAAEYLSLSQPSVSVHIKNLENYFGEKLIDRSVRQKSIKITEQ 61 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L R + ++ + + + + + G ++++A + + +++P+ IAE ++YP+I Sbjct: 62 GYLLYKRAKEVVSIIEAAKLEVKIDTEYIVGDIKISAVPSAANYILPKYIAEFSKKYPNI 121 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + V + + D D GI+ D + + E L+ D + + Sbjct: 122 NIELSIKSFDDVKKDLVNLDADIGIIDRKIMSDDFEQQECFKENMKLIFPYDYKTYISNI 181 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 ++ L G +L++ SG+R L + L + I V +G ++ V G+GISIL Sbjct: 182 HSYENLSGQNWILREKGSGTRFLTEYFLNKKQIIPKSVFIMGSSYSIKEAVKNGMGISIL 241 Query: 243 PALALPLPEGS-PLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 A E S + I R + +KN + D +++ Sbjct: 242 SGSACEQFENSNEIFCMDIDNEFSRTFYSISQKNFKPKRSVSLFLDEIKN 291 >UniRef50_Q47XE5 Transcriptional regulator, LysR family n=6 Tax=Gammaproteobacteria RepID=Q47XE5_COLP3 Length = 307 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 75/297 (25%), Positives = 142/297 (47%), Gaps = 10/297 (3%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDR---TTREVVL 59 + + QL+ FV VA+ K F A E+ +Q A+S S+++LEN L ++ T L Sbjct: 6 FKIAQLRHFVWVAELKGFHTAAEKACRTQPAISLSIRDLENKLSTILFEKRNAKTSNTEL 65 Query: 60 TDAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRY 119 T GQ + + L+ ++ +D M + +G +R+A+ +I+ ++P+ +++ Sbjct: 66 TPFGQYFLPKAKELIAHHDNVAQDMALMSEHKTGHLRLASVPSIACRMLPELLSKFIADV 125 Query: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPG--PVGDLQCEAILSEPFFLLCHRDSAL 177 P++ +D + V+ + + VD GI P D+ I + ++C D Sbjct: 126 PELHISFYDDNSEAVLRKVEKQQVDIGIASLPHGHEHADITFTPIWEDQLGVVCREDHPF 185 Query: 178 AVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGI 237 A + W+ L+ +L+ +G+ L++ A + ++ I + +L M+ G+ Sbjct: 186 AEMTELHWKELRKQRLI----RNGTSRLLEDTEAE-PLLSDSQFLISNMLSLIAMLEEGL 240 Query: 238 GISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 GI+ LP A P + TP + R + +V+ KN+SLS AAEAL + + N Sbjct: 241 GITTLPWFAFPKNNSKLRFIPLTTPKIVRHIGIVQLKNKSLSPAAEALANFILKNTN 297 >UniRef50_D1P4N6 Transcriptional regulator, LysR family n=3 Tax=Providencia RepID=D1P4N6_9ENTR Length = 311 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 64/245 (26%), Positives = 126/245 (51%), Gaps = 4/245 (1%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +LKQL+ FVT+A + F+ R+ +SQ A+S +++++E G RL++RT V LT+ G Sbjct: 12 TLKQLQYFVTLAHLRHFTETANRLAVSQPALSSALRQVETIIGGRLINRTAASVTLTELG 71 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQ-LSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 + ER+L D ++ ++ G +R+ ++S+ L P + + +P + Sbjct: 72 AAILPHAERILSVSQRGFSDIQKIIEEGGDGTLRIGLVPSVSSLLFPLIPQQLSQHFPRL 131 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGI-VIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 +D+ ++ + ++DFGI V+D +L + +PF ++ HRD L + Sbjct: 132 NVEFYDQTNDSLINKLVNNEIDFGIGVMDSSVPAELTLYPLQDDPFVVVAHRDEILTENE 191 Query: 182 Y-VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + +PW+ L + + + +R L+ A + N + I ++ + TL+ +V + + I Sbjct: 192 FHLPWKHLNHRDIAIFSKGNINR-LVTATIESNRLNTRIRYQVDYIETLYGLVRSKLAIG 250 Query: 241 ILPAL 245 ILP L Sbjct: 251 ILPQL 255 >UniRef50_A1WKV9 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A1WKV9_VEREI Length = 323 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 74/271 (27%), Positives = 130/271 (47%), Gaps = 9/271 (3%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +L+QL+ F + +E F RA +R+ ++Q A+S+++K++E G LL RTT + LT G Sbjct: 14 TLRQLQFFSVLVEEGQFGRAAKRLAITQPALSNAIKQMEKLLGAELLTRTTHRLELTPVG 73 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAA---SQTISAHLIPQCIAESHRRYP 120 ++ +R + L+ LRD Q+ VR+ + A + + R Sbjct: 74 AEVLVRTDFLVHSFAVALRDIEGTVQRGRAFVRIGVIPSASARVAAAASEFLKTGER--- 130 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +++ D P ++ +R G +D + P G L C +L +P L+ RD ALA Sbjct: 131 EVELAWRDAPSTALLAELRSGQLDMAVAAITEPPGGLTCIDLLRDPLVLVVRRDHALAAA 190 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 W+A+ +LVL + SGS P + Q + + TL+ +V +G + Sbjct: 191 GGATWEAIGRERLVL--FESGSMPALGNPARAQFAQGTEPWRVSYSETLYALVRSGQALG 248 Query: 241 ILPAL-ALPLPEGSPLVVKRITPVVERQLML 270 ++P L PL + VV + P +ER+++L Sbjct: 249 LMPRLYTAPLRDPELAVVPLLEPRIERRVVL 279 >UniRef50_A1TYB8 Transcriptional regulator, LysR family n=39 Tax=Proteobacteria RepID=A1TYB8_MARAV Length = 319 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/251 (29%), Positives = 133/251 (52%), Gaps = 13/251 (5%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +L +L+ VT+A+E+ F RA ER +SQ +S +VK+LE+ G+ L +R+ + +T+ G Sbjct: 2 TLTELRYVVTLARERHFGRAAERCHVSQPTLSVAVKKLEDELGIPLFERSKSSIRVTEVG 61 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQ-QLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 Q++ + +R+LD++ ++D + G+ QL+ ++V A TI +L P + E R PD+ Sbjct: 62 QRIIEQAQRVLDQVG-VIKDMAQDGKNQLNSPLKVGAIYTIGPYLFPHLLPELRRAAPDM 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + + +R ++D I+ P ++ + EPF +L D L ++ Sbjct: 121 PLYIEENYTASLRQKLRHSELDAIIIALPFEEPEVVTLPLYDEPFVVLLPADHPLTEKEQ 180 Query: 183 VPWQALQGAKLVLQDYASGSR--------PLIDAALAR--NGIQANIVQEIGHPATLFPM 232 V + + +L+L R PL+DA R NG + +V E T+ M Sbjct: 181 VTAEEMAKEQLLLLGPGHCFRDQVLESCPPLVDAITKRADNG-RPELVTEGSSLETIRHM 239 Query: 233 VAAGIGISILP 243 VA+G+GI++LP Sbjct: 240 VASGLGITVLP 250 >UniRef50_A9C220 Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C220_DELAS Length = 316 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 80/290 (27%), Positives = 137/290 (47%), Gaps = 15/290 (5%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 SL+QL+ FV+ + SFS A +SQ+A+S + LE+ V+L DR + V T +G Sbjct: 15 SLRQLRYFVSAMRAHSFSAASRDASISQAALSEQIALLESTLDVQLFDRASGRAVATASG 74 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 +L R+ L EL + LRD ++G VR+ Q+ + + + + ++P + Sbjct: 75 HELDRRVSACLSELQAALRDVQARASTVAGLVRIGLVQSYAGCWVLPVVRRAQAQWPQLA 134 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 L R Q ++E + +GD D + DP P DL+ A EP + + + Sbjct: 135 IALRRRTAQALVEGVLRGDFDLAVSFDPEPHADLEILACFDEPVVAVGLKPRRRRRLLEL 194 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNG------IQANIVQEIGHPATLFPMVAAGI 237 A L+ +YA R +D A A G ++++ ++++ H A MVA Sbjct: 195 SEVANHPLALLPSEYA--MRRQLDNAFAAQGLKPGVHLESDTLEDLVHAARENGMVALLN 252 Query: 238 GISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWD 287 G + A++L + + PL + + RQ LVR ++R AA+ +WD Sbjct: 253 GAA---AMSLDVQDAVPLAERNLG----RQACLVRSRSRHHGFAAQYVWD 295 >UniRef50_A4SYM5 Transcriptional regulator n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SYM5_POLSQ Length = 311 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 84/301 (27%), Positives = 151/301 (50%), Gaps = 7/301 (2%) Query: 1 MNY--SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVV 58 M Y SLKQL V +A+E +F+RA E + QS +S +KELE+ G+ L++R + V Sbjct: 1 MAYLPSLKQLTYLVALAKELNFTRAAESCFVGQSTLSAGLKELEDGLGIHLVERDRQNVS 60 Query: 59 LTDAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRR 118 +T AGQ++ R + +L + G G+ ++ +R+ TI+ L+P + E +R Sbjct: 61 ITPAGQEVLERAKTILAASQDLVEYAGASGKPMTATIRLGVIPTIAPFLLPIVLPEVRKR 120 Query: 119 YPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHR-DSAL 177 +PD++ L + ++ + + +DF ++ P L E + + F+L+ D AL Sbjct: 121 FPDLKITLREDLTANLLSRMAEHKLDFALIALPYDTSGLLVEELFDDDFWLVARAGDPAL 180 Query: 178 AVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGI 237 ++ V A +L+L + R A + I+ E TL MV +G+ Sbjct: 181 KGKE-VTLPAKMAERLLLLEEGHCLREHSLQACKKADIRKAEGMEATSLLTLLQMVESGL 239 Query: 238 GISILPALALP--LPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 GI++LP +A+ L + LV K + +P +R + LV R + + + AL +R++ + Sbjct: 240 GIALLPEMAVKSSLLNSTELVAKALASPAPKRVIALVARASTAHAQEFIALSKCIRERFS 299 Query: 295 A 295 A Sbjct: 300 A 300 >UniRef50_B7X0F3 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X0F3_COMTE Length = 307 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 88/304 (28%), Positives = 143/304 (47%), Gaps = 14/304 (4%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+VF V + +SF+ A + + ++QSAVS ELE+ G+ L +RTTR V Sbjct: 3 MNVTLRQLRVFCAVYERRSFTSAADDMHMTQSAVSKLCAELESEIGLPLFERTTRRVTPC 62 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQL----SGKVRVAASQTISAHLIPQCIAESH 116 D +L + +L+ T+R GR L G + +AAS + + L+ I Sbjct: 63 DGAAELYEYAQEVLN----TMRLAGRRLSALRTLDQGNLSIAASPMMMSGLLAPVIEAFA 118 Query: 117 RRYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSA 176 R +P ++ LH+ ++ +R G DFG+V L+ + + +E L C Sbjct: 119 RDHPKVRIDLHELTTDESVDYVRTGRCDFGLVSIAEHDPQLEPKVVCAELLCLACTPSHP 178 Query: 177 LAVEDYVPW-QALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAA 235 LA + + W +A + L+ S +R ID L G++ + G AT +V A Sbjct: 179 LAAKKRITWGEASDYPHITLRSVYS-TRKTIDRILKAQGLELRSTIQAGTLATSLRLVKA 237 Query: 236 GIGISILPALALPLPEGSPLVVKRI--TPVVERQLMLVRRKNRSLSTAAEALWDV--VRD 291 +G++++P+ A + L V I +L L+ R+ S AA A D V Sbjct: 238 NLGVTLIPSYAREFAQDLGLKVMEIYDKKPYPHELSLLTRRGLKPSIAATAFMDALQVHL 297 Query: 292 QGNA 295 QG A Sbjct: 298 QGRA 301 >UniRef50_C6CDP6 Transcriptional regulator, LysR family n=7 Tax=Enterobacteriaceae RepID=C6CDP6_DICDC Length = 309 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 76/276 (27%), Positives = 138/276 (50%), Gaps = 6/276 (2%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 SLKQL+ FVT+A+ + F+ +R+ +SQ A+S +++ +E G RL +RT V LT G Sbjct: 12 SLKQLQYFVTLARLRHFTDTADRLAISQPALSSALRHIEAVLGGRLFNRTASAVTLTALG 71 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQ-LSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 + ER+L+ S D R+ G VR+ ++S+ + P R+P + Sbjct: 72 ASVLPHAERILNVAQSGFEDMRRIADNGGDGSVRIGLVPSVSSLMFPDVPRLLAERFPRV 131 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGI-VIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + HD ++ + +G +DF I +D L+ + +P + D ALA Sbjct: 132 RVEFHDHANDSLVSLLEKGRIDFAIGALDNSVPSILEIHPLQEDPLVAVMPADDALATPS 191 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNG-IQANIVQEIGHPATLFPMVAAGIGIS 240 + WQ L +V+ +A G+ + A+A +G + ++ E+ + TL+ +V +G+ I+ Sbjct: 192 GLDWQQLDSRDIVV--FARGNVRRLVVAMAESGRYKFHVRHEVSYLETLYGLVRSGLAIA 249 Query: 241 ILPAL-ALPLPEGSPLVVKRITPVVERQLMLVRRKN 275 ILP + L + + VV P + R + L+R ++ Sbjct: 250 ILPRIYTTHLHDNALSVVPLEQPSLTRTIALMRSRH 285 >UniRef50_A5W7U4 Transcriptional regulator, LysR family n=17 Tax=Proteobacteria RepID=A5W7U4_PSEP1 Length = 308 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 82/296 (27%), Positives = 141/296 (47%), Gaps = 12/296 (4%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M ++L+Q++VFV VAQ +S SRA + LSQSA S S+ ELE + +L DR + + L Sbjct: 1 MRFTLRQMQVFVAVAQHQSVSRAASLLALSQSAASTSITELERQSSCQLFDRAGKRLALN 60 Query: 61 DAGQQLALRLERLLDELNSTLRD--TGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRR 118 G QL + LLD+ + D G+ G G + V A+ TI +L I + Sbjct: 61 ALGHQLLPQAVALLDQAKE-IEDLLNGKSG---FGSLAVGATLTIGNYLATLLIGNYMQT 116 Query: 119 YPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALA 178 +P+ Q LH + +++ + ++D G++ DL+ + + + + C LA Sbjct: 117 HPESQVKLHVQNTAHIVQQVAHYEIDLGLIEGDCNHPDLEVQPWVEDELVVFCAPQHPLA 176 Query: 179 VEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 ++L +L++ SG+R D A+ + NI E+ H + V +G+G Sbjct: 177 KLGRADIESLSQEAWILREQGSGTRLTFDQAMRHHRANLNIRLELEHTEAIKRAVESGLG 236 Query: 239 ISILPALAL--PLPEGSPLVVKRITPVVE--RQLMLVRRKNRSLSTAAEALWDVVR 290 I + LAL GS + V+ TP ++ RQ + K + ++A ++ R Sbjct: 237 IGCISRLALRDAFRRGSLVPVE--TPELDLLRQFYFIWHKQKYQTSAMREFLELCR 290 >UniRef50_A3ZZ39 Probable transcription regulator n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZZ39_9PLAN Length = 338 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 87/319 (27%), Positives = 139/319 (43%), Gaps = 26/319 (8%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 +K LKVF V ++SFSRA + G+SQS S V +LE GV+L+DR+ R +V T G+ Sbjct: 3 VKSLKVFCDVVGQRSFSRAADENGISQSGASQVVHQLEERLGVKLIDRSKRPLVPTPEGE 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 +++ + D +++ G+V VA+ ++ + C+ E ++P Sbjct: 63 MYYHGCRQIVRRYYALEEDIRTFHEEVGGRVAVASIYSVGLSHMNDCVQEFLSKHPKANV 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 L + Q V+ + VDFG+V P ++ A EP L+C LA V Sbjct: 123 RLQYQHPQTVVRMVASDQVDFGLVSYPRNTKAIKAVAWREEPMALVCSPQHELAGRASVW 182 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP- 243 L G V D R +D AL+ +G +A++V E + T+ + GIS+LP Sbjct: 183 LDELDGRDFVGFDSELQIRREMDRALSSHGAEAHVVMEFDNIETIKRAIEINAGISLLPT 242 Query: 244 ----------ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQG 293 L EG PLV R L ++ R+ + L A ++ D+ Sbjct: 243 STVVREVQSGTLVCVELEGRPLV---------RPLGIITRQGKELGKTARRFIQLLHDKA 293 Query: 294 NALMAGR------EGDPLY 306 A + E PL+ Sbjct: 294 ELSEAAKAAQIASESAPLF 312 >UniRef50_Q7W9G9 Probable LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W9G9_BORPA Length = 296 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 74/245 (30%), Positives = 116/245 (47%), Gaps = 6/245 (2%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+ L+ FV VA++ F+RA R+G+ Q +S +++LE G LL R R V LT+AG Sbjct: 3 LRHLRYFVAVAEDLHFTRAAARLGIGQPPLSLQIQQLEREIGTPLLLRQPRGVALTEAGA 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAH-LIPQCIAESHRRYPDIQ 123 + +L + R+G G + V + + H +P I RYP ++ Sbjct: 63 RFLQDARAVLHAAELAVETARRLGHGEQGDIAVGFTASAVFHPYLPSAIRAYRDRYPGVR 122 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGD-LQCEAILSEPFFLLCHRDSALAVEDY 182 L + + ++ +R G+VD V P + D E +L EP + D L + Sbjct: 123 IALSESNARALLAGLRSGEVDVAFVRPPYALDDEFASERVLDEPMLVALPPDHPLCRKRT 182 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDA---ALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 VP AL VL G+ L DA A R G ++QE A++ +VAAG+GI Sbjct: 183 VPVAALAEQDFVLYPRPIGAG-LYDAIMQACQRAGFTPRVIQEAPQMASIISLVAAGVGI 241 Query: 240 SILPA 244 +++PA Sbjct: 242 AVVPA 246 >UniRef50_C0ZFW3 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZFW3_BREBN Length = 292 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 SL + +V +TV + S ++AGE +GL+QSA+SH++ LE G LL R + LT G Sbjct: 2 SLNKFEVVITVIESGSLTKAGEILGLTQSAISHAIASLEREFGFSLLTRGRSGISLTSNG 61 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLS-------GKVRVAASQTISAHLIPQCIAESH 116 ERLL + TLR RM Q++ G VR+ ++S +P + Sbjct: 62 -------ERLLPYMRETLRCHERMKQEVFAINGLEVGTVRIGTFTSVSTQWLPGILKRFQ 114 Query: 117 RRYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSA 176 +YP I+ L + + I+ G++DFG V P DL+ + + +LL + Sbjct: 115 DQYPAIEIKLMEGYYDGIESWIQTGEIDFGFVSLP-TTEDLEWIPLKKDQMYLLVTEEHP 173 Query: 177 LAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAG 236 L E+ V L ++ +G I LA+ I+ I E+G + MV G Sbjct: 174 LYKEERVHVSRLAEETFIMPK--TGCDNDIQRLLAQYQIEPRIKYEVGDDHAIIAMVQNG 231 Query: 237 IGISILPALAL 247 +GISILP + L Sbjct: 232 LGISILPEMIL 242 >UniRef50_D2R1A9 Transcriptional regulator, LysR family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R1A9_9PLAN Length = 363 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 74/238 (31%), Positives = 111/238 (46%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 K LK+F + + +SFSRA G+SQS S V +LE H GV LLDRTTR + LT G+ Sbjct: 4 KSLKIFCDIVRSRSFSRAASEHGISQSRASQIVDQLEEHLGVLLLDRTTRPLGLTPEGEV 63 Query: 66 LALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFV 125 RL+ + Q+++G+V VA+ +I + + + ++YP Sbjct: 64 YYEGCRRLVARYFVLEEQVRTLHQEVAGRVSVASIYSIGLSHMNRIVQNFLKQYPKANVR 123 Query: 126 LHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPW 185 L + V+E + VD G+V P ++ EP L+C LA + V Sbjct: 124 LQYQHPHRVIEMVENDQVDLGLVSYPKSSRSIKATVWREEPMVLVCSPTHPLAKRESVSL 183 Query: 186 QALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 L G +LV D R ID ALA + ++ I E + T+ V G+S+LP Sbjct: 184 DELDGLELVGFDPDLEIRHEIDRALASHNVEMRIAMEFDNTETIKQAVEINAGVSLLP 241 >UniRef50_A7IF06 Transcriptional regulator, LysR family n=5 Tax=Alphaproteobacteria RepID=A7IF06_XANP2 Length = 325 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 87/290 (30%), Positives = 141/290 (48%), Gaps = 7/290 (2%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+QL+ FV++ + SFS+A R+ ++Q A+S V+ +E GV LL R+ + V T+AG+ Sbjct: 3 LRQLRYFVSIVEVGSFSKAAHRLRVAQPALSQHVRNMEIDLGVELLFRSPQGVRATEAGE 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQ-QLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 L +R RL+ R+ R GQ + G+VR T+S L ++E+ RRYP I+ Sbjct: 63 TL-VRHARLILSQMEVAREAVRRGQSEPEGEVRFGLPGTVSQMLCVPLLSEARRRYPKIK 121 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLC---HRDSALAVE 180 + + +V++ +R+G +D G++ L +LSE LL D Sbjct: 122 LRVAEAMSGFVLDWLREGKIDLGVLYRSVADRTLLARRVLSEELCLLGPAEPMDRPHPPP 181 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V + + L+L G R LI+ + + V +I + +V G+G S Sbjct: 182 GAVSFADIADLTLILPSLGHGLRDLIEERALSENVHLSTVIDIDTYGQIKLLVEGGLGYS 241 Query: 241 ILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDV 288 ILP AL + +G PV+ R L LVR +R +S A A+ D+ Sbjct: 242 ILPGAALRAEVEKGLLRTWPMGEPVLSRDLHLVRPADRPMSNAVRAIEDL 291 >UniRef50_B2HU56 Transcriptional regulator n=17 Tax=Acinetobacter RepID=B2HU56_ACIBC Length = 295 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 74/259 (28%), Positives = 132/259 (50%), Gaps = 4/259 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M +L+QL VFV VAQE + ++A + + L+QSA S ++ +LE+ G L DR + + L Sbjct: 1 MRMTLRQLAVFVAVAQEGTVTKASDAVRLTQSAASMALADLEDGLGAPLFDRLGKRLQLN 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 D G+ L + +L + + G+ S +R+ A+ TIS +L+P +A +R+P Sbjct: 61 DLGRFLLPQALEILGRCEAF--EQAAKGELQSIDLRIGATLTISDYLMPDLMANFLQRHP 118 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALA-V 179 L + ++E++ Q +D ++ + LQC + + C D L + Sbjct: 119 QAHLQLQVGNTRQMIEAVNQFQLDLALIEGSCHLPQLQCIHWRDDELAVCCSPDHPLTRL 178 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 + Q + +L++ SG+R + D A+ ++ ANI +GH + +VA G+G+ Sbjct: 179 NRPLTPQDFHDVEWILREEGSGTREVFDNAILQDLPDANIRLTLGHNEAILKIVAGGLGM 238 Query: 240 SILPALAL-PLPEGSPLVV 257 S + LA+ PL E LV+ Sbjct: 239 SCISKLAIEPLSEKGQLVI 257 >UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3192A Length = 343 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 68/242 (28%), Positives = 118/242 (48%), Gaps = 2/242 (0%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+QL+ FV VA+E SF+RA R+ ++Q VS V+ LE G +LLDR+ R V T+AG Sbjct: 3 LRQLEYFVAVAEEASFTRAAARLHVAQPGVSAQVRRLEAELGEQLLDRSGRSVRPTEAGV 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 + L + + + + G+V + + + ++P +A R +PD++ Sbjct: 63 AVLPHARAALASVGAVRGAIEELTGLVRGRVAIGMVSSYPSAVLPDLLASFSRLHPDVEI 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIV--IDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + ++++++ G++D ++ GP L + + EP LA Sbjct: 123 TLGEDNSDRLVQALQHGELDLALIGSARTGPPPGLATQTLTDEPLVAAVSHTHPLATRST 182 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + AL G+ L+ +G R +D A A G++ I E P L + A G+G++IL Sbjct: 183 LTVAALAGSPLMCLPRGTGIRTALDDACATAGVEPRIAFEASDPVPLALLAARGLGVAIL 242 Query: 243 PA 244 PA Sbjct: 243 PA 244 >UniRef50_A6VV39 Transcriptional regulator, LysR family n=6 Tax=Gammaproteobacteria RepID=A6VV39_MARMS Length = 295 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 70/293 (23%), Positives = 141/293 (48%), Gaps = 10/293 (3%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 +K L+ F+ +A+ +SF++A +++G++Q AVS ++K+LE G+ L+ R R + LTD G+ Sbjct: 3 IKPLRYFIAIAKTESFTKAAQQLGVAQPAVSMAIKKLEADLGLTLIHRADRNIGLTDEGK 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 +L + E+++ + L + + G+VRV + ++ P + +YP I Sbjct: 63 KLLIHAEKIIQATDDALLEMSELKGLSQGEVRVGIPSMLGSYYFPPILMAFRHKYPTITL 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 + + + + + G++D +++ L+ +A++ E + D + + + Sbjct: 123 KVIEGGTWQLQKMLENGELDLSVIVAETLPDGLETQALIREEMLVTIATDHPFSQLEKIS 182 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAA----GIGIS 240 +A +LV+ R ++D LA+ +IG L P++ + G GIS Sbjct: 183 PEAFFDEELVMFKEGYFHRRIVD-KLAK---ACKKTPKIGFETNLIPLIKSITQQGFGIS 238 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQG 293 L LA+ + E L+ + P + L + RK+ LS A A + V + G Sbjct: 239 TL--LAMVIEEDDDLITRSFDPPIWLDLGIAWRKDSYLSKANRAFLEFVNEHG 289 >UniRef50_P77559 Uncharacterized HTH-type transcriptional regulator ynfL n=179 Tax=Gammaproteobacteria RepID=YNFL_ECOLI Length = 297 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 3/247 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN L+ L+ FV VA+E F RA R+ +SQ +S ++ LE G RLL RT R V+LT Sbjct: 1 MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNRSVLLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVA-ASQTISAHLIPQCIAESHRRY 119 AG+Q ++L ++ R+ Q +G++R+ S + ++ R Y Sbjct: 61 AAGKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSSAPFIRAVSDTLSLFRRDY 120 Query: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 PD+ + + + + +G +D G++ + L+ I+ EP + D LA Sbjct: 121 PDVHLQTREMNTREQIAPLIEGTLDMGLLRNTALPESLEHAVIVHEPLMAMIPHDHPLAN 180 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLID--AALARNGIQANIVQEIGHPATLFPMVAAGI 237 V L V D G+ D + R + I QE+G T+ +V+AG+ Sbjct: 181 NPNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHLTPVITQEVGEAMTIIGLVSAGL 240 Query: 238 GISILPA 244 G+SILPA Sbjct: 241 GVSILPA 247 >UniRef50_B7RU53 LysR substrate binding domain protein n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RU53_9GAMM Length = 297 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 80/295 (27%), Positives = 142/295 (48%), Gaps = 11/295 (3%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 + LK F+ VA+ SFS+A E++ L+Q AVS V LE G L DR R + LT+AG+ Sbjct: 4 QNLKAFILVAETGSFSQAAEKLHLTQPAVSKRVALLEEQLGTELFDRIGRIISLTEAGKA 63 Query: 66 L---ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 L A +ER LD ++RD + ++G++R+A S I H +P ++ + +P++ Sbjct: 64 LLPQAKSVERALDAAEQSVRD---LAGDVAGQLRLATSHHIGLHRLPPVLSSFSQTFPEV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIV-IDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + + E I QG V+ +V + P ++ + +P + +D L Sbjct: 121 HIDIDFMDSEQAYELISQGKVELAVVTLAPKEQTNVISLPVWQDPLDFMIAKDHELLRSG 180 Query: 182 YVP-WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 P QA+ +L + + +I +G+Q + + T+ M + G+G + Sbjct: 181 NTPDLQAMSRHPAILPGLNTYTGQIIKRLFDSHGLQLEVSLATNYLETIRMMASVGLGWT 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 ILP + + S + + +ER L L+ + RSLS AA+A + + G++ Sbjct: 241 ILPR---SMRDESLATIDVASVAIERTLGLIYHRGRSLSRAAKAFIESTQALGDS 292 >UniRef50_D0S1T8 Transcriptional regulator n=1 Tax=Acinetobacter calcoaceticus RUH2202 RepID=D0S1T8_ACICA Length = 291 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 65/272 (23%), Positives = 136/272 (50%), Gaps = 9/272 (3%) Query: 7 QLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQL 66 +LK + + + SFS G +GL+Q+AVS +K LE++ G++L +R + V G ++ Sbjct: 4 ELKTLIAIKKYGSFSATGNNVGLTQAAVSAQIKSLESYLGIKLFERNGKTVQFNSEGLRV 63 Query: 67 ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVL 126 E+L EL ++ M +G++R+ A +I ++++P+ + E + +P + L Sbjct: 64 LALAEQLF-ELVDKMKQPECMA-DFTGEIRIGAIASIQSNILPEILEELFKYFPKAKIKL 121 Query: 127 HDRPQQWVMESIRQGDVDFGIVIDPG-PVGDLQCEAIL-SEPFFLLCHRDSALAVEDYVP 184 + + + ++D I+I P + D C L EP L+ D +++ P Sbjct: 122 IPGVSFNLFHQLGKNEIDLAIIIKPNFEISDDYCYYTLKKEPILLITPID----IQEKHP 177 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPA 244 + L+ + DY+S ++ L RN I+ N + E+ + MV +G++++P Sbjct: 178 VEILKNNPFIRYDYSSFGGKVVANYLNRNQIKTNDIIEVDEIEAIIRMVEKNLGVALIPD 237 Query: 245 LAL-PLPEGSPLVVKRITPVVERQLMLVRRKN 275 + + L E + ++ P + R+++++ +KN Sbjct: 238 IGMSKLKEKNINIIDLKQPDLYREIIIIHKKN 269 >UniRef50_B8FPA0 Transcriptional regulator, LysR family n=4 Tax=Clostridiales RepID=B8FPA0_DESHD Length = 295 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 75/286 (26%), Positives = 133/286 (46%), Gaps = 8/286 (2%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 +K L+ FV VA++KSFS+A E+ ++QS +S +K+LE G L +RT++ V LTD G Sbjct: 3 IKHLEYFVEVARQKSFSKAAEKCHVTQSTISKLIKDLEGELGTSLFNRTSKYVQLTDTGA 62 Query: 65 QL---ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 AL + + L ++ ++ + GK+ + L + + E ++YP Sbjct: 63 IFLDQALEIVTKFENLTHEFQNRIKLER---GKIAIGLLPITGTTLFAELLGEFKKKYPQ 119 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 I+ L +R + V+ I G +D G+V + A +P +++ + ++ Sbjct: 120 IEISLSERGSKKVIMDILDGTLDVGVVCSVPDSQYFESFAFAEDPLYVIVSVRNPISKLA 179 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + ++L VL I + G NI+ E + MVAA +GI+ Sbjct: 180 SIDLKSLADEPFVLYSSEFSLHDEIISKCKNEGFAPNIIFETSQFELMTQMVAADLGIAF 239 Query: 242 LPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALW 286 LP A + V +T P + Q+ ++ ++ RS+S AA LW Sbjct: 240 LPGAACREMDPRRFAVIPVTNPQIIHQMFIIWKRGRSMSHAAN-LW 284 >UniRef50_Q84IM0 Transcriptional regulator LysR family protein n=1 Tax=Clostridium bifermentans RepID=Q84IM0_CLOBI Length = 294 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 64/292 (21%), Positives = 132/292 (45%), Gaps = 4/292 (1%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTRE--VVLTDA 62 +++ K F+ V + ++F++AGE I LSQ VS +K LEN+ L++R+ ++ + +TD Sbjct: 2 IEEFKTFIAVVEHQNFTKAGESINLSQPTVSTHIKNLENYFNTTLINRSIKQKNISITDN 61 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L R ++ + S + + + G +++ AS TI+ + +P +A +YPDI Sbjct: 62 GYLLYKRAREIITSIESVKDELNSISSSIKGHIKIGASLTIAEYFLPNFLAVFSEKYPDI 121 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + E ++ ++D G+V D + + L D + ++ Sbjct: 122 EVEMLVENTHKICEKVKSSNLDIGLVEGSLTSFDFNQKFFFEDSMILTFSPDLEVDPLNF 181 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 +++ K ++++ SG+R ++ L+ N I + +G + V + +G+SI+ Sbjct: 182 -NIDSIKNKKWIVREEGSGTREYLNIFLSNNKITPRQIMVLGSNHAVKEAVKSNLGVSII 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 L EG L + R + K+ S+ D + N Sbjct: 241 SKLVTD-SEGDSLATVSLNDTYNRYFSFITPKDIKPSSTTTLFIDELNKFSN 291 >UniRef50_A1K6J7 LysR-family transcriptional regulator n=5 Tax=Proteobacteria RepID=A1K6J7_AZOSB Length = 303 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 70/249 (28%), Positives = 118/249 (47%), Gaps = 6/249 (2%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 ++QL+ F+ VA+E + RA R+ +SQ ++ +++LE +L RT R + LT AG Sbjct: 3 IRQLRYFIAVAEEANIGRAATRLHMSQPPLTRQIQQLEEELDTQLFVRTPRGMELTQAGT 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 + + T R GQ G++ VA + IP+ I YPD+ Sbjct: 63 LFLAEARNIRALIEQATERTQRAGQGKLGRLDVAIFGSAILDRIPKLILNFRNEYPDVNV 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 VLH + + ++RQ + G P+ D++ E I +E L + + LA + +P Sbjct: 123 VLHTMTKAEQISALRQNRITVGFNRMLAPLPDIRSEVIATESLLLAVNLNDPLAAQPALP 182 Query: 185 WQALQGAKLVLQDYASGSRP-LIDAALA---RNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + L ++L + SG+RP +D LA G + QE+G T +VA+G G+ Sbjct: 183 FDVLARRPVIL--FPSGARPNFVDKVLALCEARGFLPEVAQEVGDAVTGVALVASGFGVC 240 Query: 241 ILPALALPL 249 ++P A L Sbjct: 241 MVPESATTL 249 >UniRef50_D0J7Q2 Transcriptional regulator, LysR family n=2 Tax=Comamonas testosteroni RepID=D0J7Q2_COMTE Length = 308 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 75/252 (29%), Positives = 126/252 (50%), Gaps = 10/252 (3%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +N +QL+ F+ + + SF+ A ERI LS S VS VKELE GVRL +RTTR V LT Sbjct: 8 INVGSRQLQAFLEICRCGSFAAAAERIHLSPSGVSMLVKELERQLGVRLFERTTRAVALT 67 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGK--VRVAASQTISAHLIPQCIAESHRR 118 DAG+ L ER++ EL G L+ + + +AA+ I+ L+P+ +AE R+ Sbjct: 68 DAGRLLQPYAERVVTELRQL--GVALQGSTLASRSTLTIAATPVIATCLLPKVVAEFARK 125 Query: 119 YPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALA 178 +P+++ + D V +++ +G + G+ P L E++ F L Sbjct: 126 HPEVRIQVMDGSLDSVRQAVLEGHANMGMAFFVKPAAGLLRESVCR---FRLMSISPGER 182 Query: 179 VEDYV---PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAA 235 + +V W++L G ++ ++ + LID L E+ T+ MV A Sbjct: 183 LRTHVQNRTWKSLDGLPMIALPMSNPIQALIDKHLPSVKASQEERAEMNFLGTMIAMVEA 242 Query: 236 GIGISILPALAL 247 G+G +++P+ + Sbjct: 243 GLGNAVVPSFMM 254 >UniRef50_A6VUM5 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=A6VUM5_MARMS Length = 306 Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 71/297 (23%), Positives = 125/297 (42%), Gaps = 1/297 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN S+KQL+ F+ ++ SF++A +R LSQ A S + LE+ G RL DR TR+V L Sbjct: 1 MNLSIKQLRAFLALSDHDSFTQAAKRFNLSQPAFSTLIASLEDEIGYRLFDRDTRKVELN 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G RL+ + + + + +G + ++ +++ +P+ +A+ +P Sbjct: 61 ANGIHFIEIARRLILDYDEAINEIEARASGKNGTLTLSVLPSLAVEWLPEILAQYSTMHP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 Q L+D ++SI D + + S+ F+LLCH + LA Sbjct: 121 QTQIKLNDTQWNQCLKSIVNSQADLALTASQPATNIFDSHYLFSDKFYLLCHVNHPLAQN 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V L + + R D G E+ T+ +++A GI Sbjct: 181 KKVKLSDLYKYPFIGFSQRTSIRQYTDKLFESQGKLIKYSLEVQQLTTMMGLISANYGIG 240 Query: 241 ILPALALPLPEGSPLVVKRITPV-VERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 I L L + + + V +ER + LV KNR+ + + D + ++ N Sbjct: 241 ITSGLTLFQFKHQNIAIVPFEDVDLERDIYLVSLKNRAQPSHVKLFADFIMNEANKF 297 >UniRef50_Q4ZQQ6 Regulatory protein, LysR:LysR, substrate-binding n=10 Tax=Pseudomonas RepID=Q4ZQQ6_PSEU2 Length = 304 Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 87/295 (29%), Positives = 140/295 (47%), Gaps = 18/295 (6%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+ ++ + VA +F+RA E + +SQ A+S +++LE+ GV+L DRT R VV TDAG+ Sbjct: 15 LRHIRYLLAVADHGNFTRAAEALHVSQPALSQQIRQLESSLGVQLFDRTRRSVVPTDAGR 74 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 R L EL++ R + G++R+ + T S +LI I YP + Sbjct: 75 VYLDHARRCLLELDAGKRALNDVSDLSRGQLRLGVTPTFSEYLIAPLIDRFSALYPGVAI 134 Query: 125 VLHDRPQQWVMESIRQGDVDFGI--------VIDPGPVGDLQCEAILSEPFFLLCHRDSA 176 +L + P + + E++ +D I ID P+ D Q ++++P + +A Sbjct: 135 ILTELPLEQITEALISDALDLAIGFAGSHAVEIDSQPLFDEQLCLVMAKP---ASEKQAA 191 Query: 177 LAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAG 236 L +ED LQ + L +R L+DA + I E A L +VA G Sbjct: 192 LTLED------LQALRFALLAPGFATRQLLDAWCQMQNFKPIIGLEANSIAILLKVVAQG 245 Query: 237 IGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 +ILP A+ + V+ I + R + L+RRKN S AA+A +V D Sbjct: 246 RMATILPD-AIVRKQPGLCEVQTIPALPGRTVALLRRKNGYQSAAAKAFAKLVSD 299 >UniRef50_A4J4H0 Transcriptional regulator n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J4H0_DESRM Length = 303 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 134/252 (53%), Gaps = 13/252 (5%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +L KVF +AQ ++ ++A + + LSQ ++H++ LE H G +L DR+ +++ LT G Sbjct: 2 NLSHFKVFKILAQTENITKASKLLELSQPTINHNIYLLEQHYGAKLFDRSNKKLKLTRFG 61 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 + L + ++L+ + + + + +L G + + AS TI+ +++P+ + + YP++ Sbjct: 62 EVLVKYVNQILNLVEQSEQHIHELVGELRGSLNLGASHTIAENVLPKIMGMFNHDYPEVT 121 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPF-----FLLCHRDSALA 178 L + +++ I +D G++ GPV + I+S+PF ++ + LA Sbjct: 122 IHLEVTNTRHIVDHILDNKLDLGLI--EGPVTH---DNIISKPFMEDELLVVLPYNHPLA 176 Query: 179 VEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGI---QANIVQEIGHPATLFPMVAA 235 ++ + + + VL++ SG+R ++++ L G+ N V E+G+ + V A Sbjct: 177 IKKNLTIKEVANLPFVLREEGSGTRVVMESTLKGAGLDPSDLNTVMELGNTQAVIGAVEA 236 Query: 236 GIGISILPALAL 247 G+G +IL LA+ Sbjct: 237 GLGATILSGLAV 248 >UniRef50_A4JPZ1 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=A4JPZ1_BURVG Length = 296 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 92/278 (33%), Positives = 134/278 (48%), Gaps = 5/278 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+Y L LKVFV VA+E + SR ER L+ S+ S VK LE GV LL R R V LT Sbjct: 1 MSYDLTDLKVFVAVAEEGNVSRGAERCHLAPSSASLRVKNLEGSVGVTLLSRHPRGVALT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRV-AASQTISAHLIPQCIAESHRRY 119 AGQ L R L +L+ D + L+G V V A + IS+HL P +A + Sbjct: 61 AAGQVLVEHARRCLAQLDQMRSDLLPFAEGLTGHVTVFANNNAISSHL-PDDLARFFAAF 119 Query: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 P ++ L +R ++ ++ G D G+V L+ + LL ALA Sbjct: 120 PSVRITLEERLSHDIVGAVVAGRADVGVVALESEHSALRFVPYKKDQLVLLAPVTHALAR 179 Query: 180 EDYVPWQALQGAKLV-LQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 + V + A G + LQ A+ L++ A A +G VQ G+ A + +V++G G Sbjct: 180 QSEVSFAACLGQPFISLQSGAALHTFLVNHAAALDGRLDIRVQVSGYRA-IARLVSSGAG 238 Query: 239 ISILPALALPLP-EGSPLVVKRITPVVERQLMLVRRKN 275 I I+P A+ EG V+ I P +R L + ++N Sbjct: 239 IGIVPRTAIESSDEGKVAVIPLIEPWSQRNLHVCVQRN 276 >UniRef50_A6TLX8 Transcriptional regulator, LysR family n=3 Tax=Alkaliphilus RepID=A6TLX8_ALKMQ Length = 305 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 6/279 (2%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 KQL+ FV V + K+FS+AG+ + LSQ +S + LE L++R+ +++ T AG Sbjct: 3 FKQLEAFVAVVKFKNFSKAGQHLYLSQPTISSHISNLEKQLNTILINRSNKKITATKAGD 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 L +++ + + G Q+SG + +A+S ++IP I E ++ YP + F Sbjct: 63 LLYDYAISMINLKHKAIFKLGEFEGQISGNIELASSTIPEQYIIPDLICEFNKMYPHVTF 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQ-CEAILSEPFFLLCHRDSALAVEDYV 183 + + V++ I G++DFGI+ P LQ E E F+ + + + Sbjct: 123 TMRHYDSKQVVDGIINGEIDFGIIGRNIPHKQLQYVELNHDELLFVTPYTEPYNHSHAEL 182 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQAN---IVQEIGHPATLFPMVAAGIGIS 240 Q + K + ++ SG+R L + +L G + IV I + + + G+G+S Sbjct: 183 TLQDILKEKFIFREKGSGTRALFEESLNTTGFAVSDLKIVAFIENTEAIKQCIRRGLGVS 242 Query: 241 ILPALALPLP-EGSPLVVKRITPV-VERQLMLVRRKNRS 277 L + A+ + + L RI + ++R V K+RS Sbjct: 243 FLSSKAVEDEIKYNLLSAHRIKDLNLQRNFYFVYHKHRS 281 >UniRef50_C1TNQ4 Transcriptional regulator, COG0583 n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TNQ4_9BACT Length = 302 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 91/299 (30%), Positives = 139/299 (46%), Gaps = 16/299 (5%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 + +++Q+++F VA+ + + A R+GLSQSA S ++KELE L R R +VL D Sbjct: 6 DVTIRQIEIFAEVARSGNLTSAAGRLGLSQSAASMALKELERLLDGPLFGRIGRGLVLND 65 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 G+ L E +L + GR G + SG + VA S TI+ +L P + YP Sbjct: 66 RGRLLLPLAEDVLGSVRD-FTSVGRSGDEPSGDLTVACSTTIANYLFPFHMKAFMDEYPR 124 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFF-----LLCHRDSA 176 I +L + E I +G D G+V G+L+ E + SE + + C Sbjct: 125 ISLILKVGNTMEIEEEISKGCADIGLV-----EGELRGEHLRSEDWIRDDLSIFCSPQDP 179 Query: 177 LAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAG 236 LA E V L +L++ SG+ I AAL R G+ + IGH + V AG Sbjct: 180 LARESLVSPIRLSKECWILREDGSGTLSTIMAALDREGVSLSRTVRIGHTEAIKRAVEAG 239 Query: 237 IGISILPALAL--PLPEGS-PLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 +GIS L A+ + G LV +TP +++ RR + +A W +RD Sbjct: 240 MGISCLSRFAVEREVARGDLALVDTSLTPSRWFRIITHRRNGGGPAFSAMTGW--LRDH 296 >UniRef50_C7GB30 Transcriptional regulator n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GB30_9FIRM Length = 316 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 80/295 (27%), Positives = 144/295 (48%), Gaps = 12/295 (4%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ- 64 +QL +F TV +E S ++ E++ ++Q AVS ++KELE +GV L+R R+VV T++G+ Sbjct: 4 RQLTIFRTVCEEGSMTKTAEKLYMTQPAVSQTIKELEQESGVCFLERYNRKVVPTESGRL 63 Query: 65 --QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 Q A + L +L L++T + +R+ A+ ++ ++ I ++YPDI Sbjct: 64 LYQYACHILGLYQDLEQHLKET-----EGVRTIRIGANLSVGVKMLRGFIRAFEKKYPDI 118 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVID-PGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 Q + +ME ++ +D G++ D PG +Q E + ++ D LA ++ Sbjct: 119 QVKVTVSGSVRLMELLKTHQIDLGLMEDLPGETDYIQ-EPFAKDRTLIVAAPDHPLAGKE 177 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 +V ++ L+ +L++ +G R +A L + + E L V G GIS+ Sbjct: 178 HVRFEDLKKENFLLREKGAGVRDRFEAILRTKDCVIDPLWESRSTKVLVQAVEDGFGISV 237 Query: 242 LPALALP--LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 LP + L EG +K +ER L LV ++ + D+VR G+ Sbjct: 238 LPYCLIEEYLKEGRLAEIKVEDLCLERNLNLVYHPHKVWNDPLRDFMDIVRWYGH 292 >UniRef50_B8IEH6 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IEH6_METNO Length = 291 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 85/292 (29%), Positives = 144/292 (49%), Gaps = 13/292 (4%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L++LK FVTVA+ SF+ AG+ IGL+ SA+S ++ LE G+RL DRT R +L G+ Sbjct: 2 LRELKTFVTVARHGSFAAAGQVIGLTPSAISAQIRNLEQELGMRLFDRTGRTALLNMNGK 61 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 + AL L + S + + G G + G+++V A T+ ++P + R+ PD++ Sbjct: 62 K-ALALAEEMLATFSRMAEVGD-GATIRGELKVGAIATVQTGILPGALVSLQRQAPDLKI 119 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVG---DLQCEAILSEPFFLLC-HRDSALAVE 180 L ++ + G++D +++ P P DL E + E F L+ HR ++ + Sbjct: 120 HLVPGMSLTLLNQVDSGEIDLALLVKP-PFSLQKDLHSEDLAQEEFVLITPHRITS---D 175 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 D P + L + D AS + L+ L + GI + + E+ + MV G+G+S Sbjct: 176 D--PAEILSDHPFIRYDRASFAGRLVARFLQQQGIDPDQILELDEIEAIVRMVEGGLGVS 233 Query: 241 ILPALALPLPEGSPLVVKRITPV-VERQLMLVRRKNRSLSTAAEALWDVVRD 291 I+P L + + V R+ + R L V R ++ A E VR+ Sbjct: 234 IVPLAGLWITTADRVRVLRLGRLAFHRTLQAVVRYSQRTVPAVELFLGCVRE 285 >UniRef50_B1J4U2 Transcriptional regulator, LysR family n=2 Tax=Pseudomonas putida RepID=B1J4U2_PSEPW Length = 311 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 85/293 (29%), Positives = 134/293 (45%), Gaps = 10/293 (3%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 LKQL+ FV VA+ F+RA + LSQS VS V++LE G LL R R V LT AG Sbjct: 12 LKQLECFVRVAEFGGFTRAAATLNLSQSVVSRQVRQLELELGQHLLLRNGRGVTLTPAGT 71 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 +L + +L ++ D L+GKV + +I+ + + +P Sbjct: 72 RLFEHGQGILRQVQVAREDLQEQRDSLTGKVVIGLPPSIARRHTVGIVTAFQKAFPGCSL 131 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 + + + E + G +DF ++ +P L E + SEP +L+ + LA VP Sbjct: 132 GIKEGLSHSMREWLLLGRLDFALLYNPAQNAQLHFEPLQSEPLWLIGAAGACLA--PAVP 189 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPA 244 L L++ R LI++ AR+ ++ N+ EI +L +VAAG G ++L Sbjct: 190 LATLGDYPLIIPSQPHSLRRLIESEAARHHVELNVHMEIDGIPSLIDLVAAGAGFAVLSR 249 Query: 245 LAL-----PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 +AL PL S +V+ P + L + R L+ A VV+ Q Sbjct: 250 MALSGSYVPLGLQSAPIVE---PTINTHLFVATTNQRPLTRLASMTLAVVKHQ 299 >UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepID=A9WGB3_CHLAA Length = 304 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 82/289 (28%), Positives = 128/289 (44%), Gaps = 7/289 (2%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+QL+ F+ VA+E +RA E++ +SQ A+S +K LE G L DR R + LT AG+ Sbjct: 3 LRQLRYFLAVAEEGHITRAAEKLYISQPALSQQIKLLEEEIGTVLFDRIGRRIRLTAAGE 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 L R L EL+ + G +R+ QT++A+L+P +A YP I Sbjct: 63 ILVAHARRALQELSEAQVAIDELNGLQRGMLRIGVVQTVNAYLMPDLVAAFTNAYPAISL 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 + + + + + + GD+ GI P + E + SE ++ R A +P Sbjct: 123 QIEELATRDIEQRLADGDLQIGIGFVPPETAGVTGEELFSEDLVVVVSRQHPWADLPQLP 182 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPA 244 Q+L L+L +R L D GIQ + E+ ++ V ++LPA Sbjct: 183 VQSLHQQPLILLSTTFCTRRLWDRCTHIAGIQPRVQIEMNTIGSILAAVRQLTLATVLPA 242 Query: 245 LAL---PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 + L P G PLV P R + L+ R N A A + R Sbjct: 243 MVLSGQPDLVGIPLV----DPTPRRTVGLLFRHNAYRCAATRAFVAMTR 287 >UniRef50_C5BDD2 HTH-type transcriptional regulator AlsR n=2 Tax=Edwardsiella RepID=C5BDD2_EDWI9 Length = 330 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 75/254 (29%), Positives = 121/254 (47%), Gaps = 16/254 (6%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M ++ LK F+ VA+E+ F+RA ER+ +SQ +S ++ LE G LL RT R V LT Sbjct: 18 MRIEIRHLKYFIAVAEERHFNRAAERLNISQPPLSQQIQSLERELGACLLMRTNRSVSLT 77 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQC---IAESHR 117 AG ++ +L R + +G + + + ++ IP+ + Sbjct: 78 QAGSLFLKECYSIVGQLEQAAEKAARAHRGETGDLTIGFTSSVP--FIPRVAHSLFSYRH 135 Query: 118 RYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSAL 177 RYP + + + + +E + G +D GI+ + G L+ + EP + HR L Sbjct: 136 RYPQVHLQMRELNTKQQIEPLVDGKLDIGILRNTLLPGVLKHRVLQREPLVAVLHRHHPL 195 Query: 178 AVEDYVPWQALQGAKLVLQDYASGSR----PLID---AALARNGIQANIVQEIGHPATLF 230 A QAL+ + L Q + SR L D + L R GI I QE+G T+ Sbjct: 196 AQRG----QALRFSDLADQPFVFFSRGDGTALYDELLSLLKRAGIVPYITQEVGEAMTIV 251 Query: 231 PMVAAGIGISILPA 244 +++AG+G+SILPA Sbjct: 252 GLISAGLGVSILPA 265 >UniRef50_P52667 HTH-type transcriptional regulator estR n=17 Tax=Acinetobacter RepID=ESTR_ACIAD Length = 301 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 80/294 (27%), Positives = 146/294 (49%), Gaps = 12/294 (4%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 SL+QL VT+++ F+ A R ++QS +S + ELE G L++R + V LT G Sbjct: 6 SLRQLSYLVTLSETLHFTEAARRSFVTQSTLSGGIMELERLLGGVLVERDRQNVRLTPLG 65 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 +Q+ R LL + +R + M + L+G + + TI+ ++ Q + E H++ P IQ Sbjct: 66 EQVVARARVLLADAQDLMRLSREMSEPLTGDLHLGIIPTIAPFILTQLLDEVHKQLPKIQ 125 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 LH+ + ++E + G++D ++ P L+ I E +L+C++ +V + Sbjct: 126 LHLHEAQSEKIVERLEHGNLDMVVLALPFDTRGLKVADIAKENLYLVCNKHDKHSVNAH- 184 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGI----QANIVQEIGHPATLFPMVAAGIGI 239 L ++L+L + R D AL+ I N ++ P TL MV++ +G Sbjct: 185 SLDDLDLSRLMLLEEGHCLR---DHALSACPIGERKNDNRLKASSLP-TLVEMVSSNLGF 240 Query: 240 SILPALALP---LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 ++LP +A+ L L+VK I R L L+ RK+ L + + + D+++ Sbjct: 241 TLLPEIAINTHMLKFNDDLLVKEIENAPSRTLALITRKSTPLQSEFDVILDILK 294 >UniRef50_A3K7Z5 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Sagittula stellata E-37 RepID=A3K7Z5_9RHOB Length = 333 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 74/266 (27%), Positives = 131/266 (49%), Gaps = 20/266 (7%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+QL+ F+ VA+E +F+RA E++G++Q +S + LE V+LL+R+ R V LT G+ Sbjct: 31 LRQLRYFLAVAEELNFTRAAEKMGIAQPPLSQQILVLEQQLRVKLLNRSRRHVSLTPEGE 90 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 L R+++ G + + G + VAA + ++PQ ++P ++F Sbjct: 91 AFILYARRIINNTQIAAELVGAIKRGEEGPLSVAAIFSSIYTVVPQLFEAFVAQHPRVRF 150 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 L + + ++R+ +D GI+ P +++ +L EPF ++ + LA + + Sbjct: 151 HLQEMTIGQQLVALREERIDLGILRGPIIHPEIETHTLLEEPFVVVVSKKHPLAKQTILT 210 Query: 185 WQALQGAKL------VLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 + L V +DY+ + + LA NIV E+ TL +VAAG+G Sbjct: 211 ADQVLSQPLIRVIPSVNRDYSHQ----MFSVLANRNTTPNIVHEVSDTHTLLGLVAAGMG 266 Query: 239 ISILPALA----------LPLPEGSP 254 IS++PA +PL EG+P Sbjct: 267 ISMVPASVRSIHTDQLRYIPLREGTP 292 >UniRef50_B8G0Z2 Transcriptional regulator, LysR family n=4 Tax=Firmicutes RepID=B8G0Z2_DESHD Length = 303 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 74/290 (25%), Positives = 144/290 (49%), Gaps = 14/290 (4%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 ++ L++F VA+EKSFS+A E + LSQ AVS ++ LEN G +L+ R+++ V LT AG+ Sbjct: 3 IETLEIFRKVAEEKSFSKAAEDLFLSQPAVSSHIRNLENEFGTKLIYRSSKHVDLTPAGE 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 L + R++++ ++ +SG +R+ AS TI +++P+ ++++ RRYP++ Sbjct: 63 ILYEQACRIINQYQEAKEKINQIQSIVSGNLRIGASFTIGEYILPELVSQTARRYPNLNI 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFF-----LLCHRDSALAV 179 + + + + +RQ +D +V G + + + EPF L+ LA Sbjct: 123 NVTIGNTEEIAQGLRQNRLDVALV-----EGKITGKEFILEPFMVDEMVLIALPSHPLAK 177 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 V Q L+ +L++ SG+R D + I + V +G+GI Sbjct: 178 IKGVTAQDLEDQVWILRETGSGTREFSDRFIETLKIPVKHSYGFSSNTGVKAAVLSGLGI 237 Query: 240 SILPALAL--PLPEGSPLVV--KRITPVVERQLMLVRRKNRSLSTAAEAL 285 +++ L + + G ++ + P + R+ ++ R + + A+EA Sbjct: 238 ALVSKLIIQKEIKAGEIAIIPLEENLPRLSREFLIARGQQTYFTKASEAF 287 >UniRef50_Q12AP3 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=Q12AP3_POLSJ Length = 303 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 114/230 (49%), Gaps = 3/230 (1%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+ L+ FV +A+ +F+RA ER+ ++QS +SH +++LE G L +R + V++T+ G+ Sbjct: 3 LRHLRYFVALAECLNFTRAAERVHITQSTLSHQIRQLEEEIGELLFERVGKRVLITERGE 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 + L E++ + + L+GK+R+ ++ T + IP+CIA R+P ++ Sbjct: 63 LFLSYAAKALKEVDQGVAALKESARGLTGKLRIGSTHTFNQGFIPECIATLLVRHPTVKV 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 + + E + G +D GI P VGDL E + +E L+ LA + Sbjct: 123 AASEFTADDIGERLASGALDLGISYRPRTVGDLWFEPLYNEQMVLVVSPQHPLAGRKRIR 182 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVA 234 L LVL A +R ++D + +V E+ TL PM+A Sbjct: 183 LVELHRQPLVLLPEAFATRAMLDECFRACDAEPLVVVEMN---TLAPMLA 229 >UniRef50_A8GI93 Transcriptional regulator, LysR family n=3 Tax=Enterobacteriaceae RepID=A8GI93_SERP5 Length = 292 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 76/246 (30%), Positives = 115/246 (46%), Gaps = 9/246 (3%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +LKQ++ + VA+E+SF+RA +R QSA+SH + +LE G L +RT+R V LT AG Sbjct: 2 NLKQIRFALAVAEEQSFTRAAQRCHTVQSALSHQIAKLEEELGCTLFERTSRRVRLTTAG 61 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 Q +RLL + + + +SG + + TI+A + + + HR YP + Sbjct: 62 QAFIQPAQRLLAAKQALVEEVVAASGTVSGTLTIGTISTINAIDLTEKLGNFHRHYPAVN 121 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIV------IDPGPVGDLQCEAILSEPFFLLCHRDSAL 177 L+ + ++E +RQ D V ID PV Q + EP L L Sbjct: 122 IRLYVGMSEALLEDVRQQKTDVAFVGLWPGDIDMLPVSHRQ---LTDEPLVALVATQHPL 178 Query: 178 AVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGI 237 A V Q L LV +G+R D A GI+ ++ EI H L +V G+ Sbjct: 179 ASRQRVNLQTLSEVPLVDFYSGTGARRQTDRAFQAAGIKRHVSFEIDHIEWLENLVRRGL 238 Query: 238 GISILP 243 I+P Sbjct: 239 AAGIVP 244 >UniRef50_Q2SFE9 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFE9_HAHCH Length = 310 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 83/304 (27%), Positives = 146/304 (48%), Gaps = 31/304 (10%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN S + L++FVT A + SRA E + +SQ A++ ++KELE+ GV L RTTR + LT Sbjct: 1 MNLSQRHLQMFVTTAAYCNVSRASEILHISQPALTRALKELESQLGVTLFQRTTRRINLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGR---MGQQLSGKVRVAASQTISAHLIPQCIAESHR 117 G++ +RLL+++ + D R GQQ G + +A + ++P + + Sbjct: 61 MEGERFLPVAQRLLNDMTVAI-DMVRGEATGQQ--GSISLAVGEAFGCTVLPAVLKVFAQ 117 Query: 118 RYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSAL 177 +P ++ + + + + + +VDFGI G G L C +LS P LL Sbjct: 118 SFPRVRVRIINDNSKGITRRVDNSEVDFGIGSPVGNTGALLCTPLLSAPLGLLAD----- 172 Query: 178 AVEDYVPWQALQGAKLVLQDYASGSRPLIDAA--------LARNGIQA----NIVQEIGH 225 P Q G + + D A S PL+ + L+ NG +I E+ Sbjct: 173 ------PSQYKLGTDVDVSDLA--SLPLLKESNDTSIHHLLSVNGSDVVAWMSIGIEVSS 224 Query: 226 PATLFPMVAAGIGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEAL 285 A + +G+G+++L AL + + ++ P + R++ L++R++R LS ++ AL Sbjct: 225 LAQQLALARSGVGVAVLSALGASHYDAVSMKFSQLKPEINRKVFLMQRRDRVLSPSSRAL 284 Query: 286 WDVV 289 + Sbjct: 285 LATI 288 >UniRef50_Q7W1I2 Putative LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W1I2_BORPA Length = 316 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 84/292 (28%), Positives = 145/292 (49%), Gaps = 6/292 (2%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 S++QL+ FV V + S A E + L+Q AV+ +KELE GVRL DRTTR + T A Sbjct: 23 SIRQLRAFVAVYYTGTLSAAAEALSLTQPAVTILLKELEEKLGVRLFDRTTRALRRTTAA 82 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 + ER+L EL++ + G++RVAA+ T++ L+P+ + +P ++ Sbjct: 83 LEAIAYAERVLGELDALSASMTDLADVRRGRLRVAATSTVAQTLLPKVVRRFLDLHPGVK 142 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLC--HRDSALAVED 181 + D E + VD G+ V L+ L + LC D+A Sbjct: 143 LSVDDCAPAMFAEHVLSEQVDLGVGTLESAVPGLEQHQFLGDH---LCAVATDAAFGHGR 199 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + W+ L G +++ G R I+ A + G++ + E+ T M A+G+G+++ Sbjct: 200 PMTWKQLSGLPVIVVQAGYGVRRSIERAAQQAGVELQVAFEVSLLTTALAMAASGLGVAV 259 Query: 242 LPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 +P L + LV +R+ PVV R +V ++ R+LS +A+A +++R + Sbjct: 260 VPQSILAHTHYTNLVARRLVRPVVLRSTSVVFKEARALSPSAQAFAELLRRE 311 >UniRef50_C7RAV2 Transcriptional regulator, LysR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAV2_KANKD Length = 288 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 70/284 (24%), Positives = 136/284 (47%), Gaps = 5/284 (1%) Query: 8 LKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLA 67 L+ F++VA SF+ A +++ L+Q A+S +K LE G L DR V+ T+AG+ L Sbjct: 6 LRTFLSVASIGSFTLAAKKLQLTQPALSKRIKRLETIVGTNLFDRVGNHVIETEAGRLLR 65 Query: 68 LRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLH 127 + +L +++T +D + ++SG++ + S I HL+P + + YP++ + Sbjct: 66 EQAPAILGSIDNTFQDIRDLTGRVSGQLHIGTSHYIGLHLLPDYLEQYIDTYPEVDLNID 125 Query: 128 DRPQQWVMESIRQGDVDFGIVIDPGPVGD-LQCEAILSEPFFLLCHRDSALAVEDYVPWQ 186 + + + GD++ ++ P L+ + I E ++CH+D L D P Sbjct: 126 FIDSELAYDRVLSGDLELALLTFPSQANPRLEHQLIWQEALQMVCHQDYELLAHDN-PMN 184 Query: 187 ALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALA 246 L +L + R L + L G+ V+ + + +VA +G ++LP Sbjct: 185 QLSNYPCILPPAHTFPRELFEHQLETLGVHLGKVKTANYLEVIAKLVACKMGWTLLPERL 244 Query: 247 LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 + P ++ + R + ++ R N++LS AA+AL D++ Sbjct: 245 VSEPLT---LIGDSRQLSVRSMGIIYRTNKTLSNAAQALVDLLH 285 >UniRef50_A8GAT1 Transcriptional regulator, LysR family n=2 Tax=Enterobacteriaceae RepID=A8GAT1_SERP5 Length = 310 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 77/280 (27%), Positives = 142/280 (50%), Gaps = 10/280 (3%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 SLKQ++ FVT+AQ + F+ R+ +SQ A+S +++++E G +L++RT V LT+ G Sbjct: 12 SLKQIQYFVTLAQLRHFTDTANRLAISQPALSSALRQIETVLGGKLVNRTASAVTLTEQG 71 Query: 64 QQLALRLERLLDELNSTLRDTGR-MGQQLSGKVRVAASQTISAHL---IPQCIAESHRRY 119 + ERLL+ + D R M G VR+ ++S L +PQ +A + + Sbjct: 72 AAILPHAERLLNVAQAAFDDMQRIMLAGGDGTVRIGLVPSVSGLLFPAVPQLLAAN---F 128 Query: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGI-VIDPGPVGDLQCEAILSEPFFLLCHRDSALA 178 P ++ HD+ ++ + G +DFGI +D L+ + +PF ++ RD LA Sbjct: 129 PRLRIEFHDQTNDSLLLQLENGLIDFGIGALDSSVPESLEIYPLQEDPFVVVMRRDDPLA 188 Query: 179 VEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 ++PW+ L + + + SR L+ A + + ++ TL+ +V + + Sbjct: 189 ESHHLPWRQLTRRDIAVFSKGNISR-LVLALAESHRLNLTARFQVDFLETLYGLVRSKLA 247 Query: 239 ISILPAL-ALPLPEGSPLVVKRITPVVERQLMLVRRKNRS 277 ++ILP L L + VV+ P++ R + L+R +R+ Sbjct: 248 VAILPQLYTTHLNDDELTVVQLQQPMLSRTVALMRSAHRN 287 >UniRef50_B9R4T6 LysR substrate binding domain, putative n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R4T6_9RHOB Length = 285 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 85/282 (30%), Positives = 132/282 (46%), Gaps = 7/282 (2%) Query: 14 VAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLALRLERL 73 + + S S A +G+SQ AVS + +LE G+ LL R R + LT+ GQ LA+ R Sbjct: 8 IGETGSVSEAARALGISQPAVSKGIAQLEKRFGLDLLIRGARPLGLTEEGQALAV-FARQ 66 Query: 74 LDEL-NSTLRDTGRMGQQLSGKVRVAA-SQTISAHLIPQCIAESHRRYPDIQFVLHDRPQ 131 D L + LR + + G VR+ + + S H++P+ + R++P I + + P Sbjct: 67 ADLLQDKALRHLQDVRRDKIGTVRLGSFGSSASFHILPRLLGAFGRKFPCIDVEILEFPD 126 Query: 132 QWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQALQGA 191 + +R G VD I+ DP DL ++S+ L D LAV V + L Sbjct: 127 ADLETVLRSGGVDAAILADPHK-EDLDIFPLVSDELVALVQDDHPLAVRSTVRAEDLCRD 185 Query: 192 KLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALALPLPE 251 +L GS PL++ A G + I ++ +V AG+G+SI+ LALP E Sbjct: 186 PFILTK--GGSAPLVEKWFAAAGQTPKVAHTILQVNSILALVNAGLGVSIIAKLALP-SE 242 Query: 252 GSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQG 293 + + V +TP R ++L R S S AA+ W G Sbjct: 243 PAGVKVLPLTPTAPRSIILARIDKASRSRAAQTFWQFCESTG 284 >UniRef50_A3VLP1 LysR family transcriptional regulatory protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VLP1_9RHOB Length = 325 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 74/251 (29%), Positives = 129/251 (51%), Gaps = 20/251 (7%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+QL+ F+ VA+E +F+RA ER+G++Q +S + LE+ G +L R+ R V LT G Sbjct: 12 LRQLRYFLAVAEELNFTRAAERMGIAQPPLSQQIISLEHQLGAKLFIRSCRRVKLTAEGI 71 Query: 65 QLALRLERLLDELNSTLRDT--------GRMGQQLSGKVRVAASQTISAHLIPQCIAESH 116 +L R+ +N+T+ T G+ GQ G V +A ++ H++P A Sbjct: 72 ELQAYARRI---INTTMLATESIRSIANGKNGQIALGSV-CSAIHSLVPHILPPFAA--- 124 Query: 117 RRYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSA 176 +P ++ L + + ++ + +D IV +P + + + +EPF +R+S Sbjct: 125 -LHPGVRVHLQEMTVKEQFRALNEERIDIAIVREPMATTEFATQPLFTEPFVAAVNRNSP 183 Query: 177 LAVEDYVPWQALQGAKLVLQDYASGSRPLID---AALARNGIQANIVQEIGHPATLFPMV 233 LA + + + + LV Q Y S +R D +AL G + N+V E +L +V Sbjct: 184 LARMNRLSLEQIAREPLV-QVYRSANREYSDHMFSALMEQGYELNVVCEASDMHSLLGLV 242 Query: 234 AAGIGISILPA 244 A+GIG+S++PA Sbjct: 243 ASGIGVSLVPA 253 >UniRef50_B4WH17 LysR substrate binding domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WH17_9SYNE Length = 308 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 89/291 (30%), Positives = 147/291 (50%), Gaps = 11/291 (3%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 + QL V VA SFS A + L+QS +SH++ LE G+ LL R VLT G Sbjct: 9 ISQLAALVAVADHGSFSTAALHLNLAQSTISHAIATLETELGIVLLIRGRNGAVLTPLGL 68 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQL-SGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 Q+ + +L +L+S +R T + + L +G+VRVAA +T++ H++P I+ R +P + Sbjct: 69 QICQQARAVLTQLDS-IRHTAQQAKGLQTGRVRVAAFRTVATHILPDVISRFRRSHPALT 127 Query: 124 FVL--HDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFF-LLCHRDSALAVE 180 + +DR + V +++R+G D G V+ P D Q IL + F LL +A A Sbjct: 128 VEIDEYDRYAE-VEQALREGRADIGFVLLPTAT-DFQYWEILRDDFVALLPPTQNATAKA 185 Query: 181 D-YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 D + W+ L ++ + L++ LA+ G + I + +TL +V G+G Sbjct: 186 DASLTWEELVSYPRAANKRSTQNNRLVEEHLAQFGYRLPIDYAVREDSTLMSLVTKGLGA 245 Query: 240 SILPAL-ALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 ++L L A P+P G + VK + +ER + + +N L A DV+ Sbjct: 246 AVLARLEAEPIPPG--VRVKSLPEPLERVIGVAILENAVLPRAVFVFLDVL 294 >UniRef50_A0RKW5 Transcriptional regulator, LysR family n=81 Tax=Bacillus RepID=A0RKW5_BACAH Length = 306 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 64/235 (27%), Positives = 117/235 (49%) Query: 8 LKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLA 67 LK+FVTV ++K FSRA E + LSQ VS ++ LEN G L+ R+ + V +T+AG L Sbjct: 15 LKIFVTVVEQKHFSRAAELLNLSQPGVSMHIRNLENEFGTTLIQRSPKHVQVTEAGNILY 74 Query: 68 LRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLH 127 + +++L + + ++G +R+ AS TI +L+P+ +A P ++ Sbjct: 75 IHAKQMLSLYEDAKQKINELHNVVTGTLRIGASFTIGEYLLPKILANYANENPHVEVHTF 134 Query: 128 DRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQA 187 + V++S+R +D G+V D+ E + + L+ + L + + Sbjct: 135 ISNTEDVLQSLRSNQIDIGLVEGQVVYADVDVETFMQDEMKLVVPPNHPLLRTNEMNEST 194 Query: 188 LQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 LQ VL++ SG+R D + ++ ++ ++ V+AG+GI+IL Sbjct: 195 LQDQVWVLRESGSGTRAYSDRFIHQHHLKMKRFFTFSSIQSVKEAVSAGLGIAIL 249 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0ACR7 Uncharacterized HTH-type transcriptional regulat... 400 e-110 UniRef50_Q475G5 Regulatory protein, LysR:LysR, substrate-binding... 333 5e-90 UniRef50_Q0KE24 Transcriptional regulator, LysR-family n=2 Tax=C... 321 1e-86 UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=C... 316 9e-85 UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Prote... 315 1e-84 UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=... 309 5e-83 UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=ma... 309 7e-83 UniRef50_P39592 Uncharacterized HTH-type transcriptional regulat... 308 2e-82 UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=... 308 2e-82 UniRef50_C6P9X7 Transcriptional regulator, LysR family n=1 Tax=T... 304 2e-81 UniRef50_A4J1K6 Transcriptional regulator, LysR family n=1 Tax=D... 303 4e-81 UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepI... 303 5e-81 UniRef50_P52696 Uncharacterized HTH-type transcriptional regulat... 303 5e-81 UniRef50_C6C982 Transcriptional regulator, LysR family n=1 Tax=D... 303 6e-81 UniRef50_UPI0001745DD5 transcriptional regulator, LysR family pr... 303 6e-81 UniRef50_Q46WQ0 Transcriptional regulator, LysR family n=1 Tax=R... 301 2e-80 UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=g... 300 4e-80 UniRef50_A0L4T1 Transcriptional regulator, LysR family n=2 Tax=P... 300 5e-80 UniRef50_B1KU62 Transcriptional regulator, LysR family n=10 Tax=... 299 6e-80 UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax... 299 6e-80 UniRef50_C0ZCK2 Transcriptional regulator n=1 Tax=Brevibacillus ... 298 1e-79 UniRef50_B5YJV7 Transcriptional regulator n=1 Tax=Thermodesulfov... 298 2e-79 UniRef50_Q31FC6 Transcriptional regulator, LysR family n=7 Tax=P... 296 7e-79 UniRef50_B1Z4Z1 Transcriptional regulator, LysR family n=5 Tax=P... 296 9e-79 UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Ba... 295 1e-78 UniRef50_C6CYG5 Transcriptional regulator, LysR family n=2 Tax=P... 295 1e-78 UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=R... 294 2e-78 UniRef50_Q0K6D4 Transcriptional regulator, LysR-family n=2 Tax=C... 294 2e-78 UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=B... 294 3e-78 UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=P... 294 3e-78 UniRef50_Q7WCW0 Probable LysR-family transcriptional regulator n... 294 3e-78 UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=C... 293 4e-78 UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=... 293 5e-78 UniRef50_UPI00016C47B2 transcriptional regulator, LysR family pr... 292 7e-78 UniRef50_Q46PT5 Transcriptional regulator, LysR family n=1 Tax=R... 291 2e-77 UniRef50_B0N992 Putative uncharacterized protein n=2 Tax=Clostri... 291 2e-77 UniRef50_P37499 Uncharacterized HTH-type transcriptional regulat... 290 3e-77 UniRef50_A7ZAT2 Putative HTH-type transcriptional regulator n=2 ... 290 4e-77 UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=... 290 5e-77 UniRef50_Q0TQC8 Transcriptional regulator, LysR family n=10 Tax=... 289 7e-77 UniRef50_Q1IRZ3 Transcriptional regulator, LysR family n=1 Tax=C... 288 1e-76 UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=M... 287 2e-76 UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdema... 287 3e-76 UniRef50_B8D275 Transcriptional regulator, LysR family n=11 Tax=... 287 3e-76 UniRef50_C8VWS6 Transcriptional regulator, LysR family n=1 Tax=D... 287 4e-76 UniRef50_Q65GU9 Transcriptional regulator YbbE n=2 Tax=Bacillus ... 286 5e-76 UniRef50_Q46SX0 Transcriptional regulator, LysR family n=4 Tax=B... 286 9e-76 UniRef50_Q46Q42 Regulatory protein, LysR:LysR, substrate-binding... 286 1e-75 UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae R... 285 1e-75 UniRef50_A8IAC4 Transcriptional regulator n=1 Tax=Azorhizobium c... 285 1e-75 UniRef50_B7IPY3 Transcriptional regulator, LysR family n=74 Tax=... 284 2e-75 UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=D... 284 2e-75 UniRef50_A5MZU7 Predicted transcriptional regulator n=3 Tax=Clos... 284 3e-75 UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepI... 284 4e-75 UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=A... 283 4e-75 UniRef50_Q127N6 Transcriptional regulator, LysR family n=1 Tax=P... 283 6e-75 UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Ta... 283 6e-75 UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Ba... 283 6e-75 UniRef50_B2JVU4 Transcriptional regulator, LysR family n=43 Tax=... 282 9e-75 UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=... 282 1e-74 UniRef50_A6VV39 Transcriptional regulator, LysR family n=6 Tax=G... 282 1e-74 UniRef50_C0ZI27 Transcriptional regulator n=1 Tax=Brevibacillus ... 282 1e-74 UniRef50_P0ACQ6 Hydrogen peroxide-inducible genes activator n=27... 281 2e-74 UniRef50_C7RSN5 Transcriptional regulator, LysR family n=1 Tax=C... 281 2e-74 UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=A... 281 2e-74 UniRef50_P25544 RuBisCO operon transcriptional regulator n=13 Ta... 281 2e-74 UniRef50_B6FPK4 Putative uncharacterized protein n=1 Tax=Clostri... 281 3e-74 UniRef50_D1BNW2 Transcriptional regulator, LysR family n=4 Tax=V... 281 3e-74 UniRef50_A6UGP0 Transcriptional regulator, LysR family n=2 Tax=S... 280 4e-74 UniRef50_B0T3V7 Transcriptional regulator, LysR family n=1 Tax=C... 280 4e-74 UniRef50_B1I114 Transcriptional regulator, LysR family n=1 Tax=C... 280 5e-74 UniRef50_A3I8L6 Transcriptional regulator, LysR family protein n... 280 5e-74 UniRef50_Q46S80 Transcriptional regulator, LysR family n=4 Tax=C... 279 6e-74 UniRef50_B8FPA0 Transcriptional regulator, LysR family n=4 Tax=C... 279 7e-74 UniRef50_B1Y5W5 Transcriptional regulator, LysR family n=2 Tax=B... 279 7e-74 UniRef50_D0KYG7 Transcriptional regulator, LysR family n=3 Tax=G... 279 9e-74 UniRef50_A0RKW5 Transcriptional regulator, LysR family n=81 Tax=... 279 9e-74 UniRef50_Q4KHB2 Transcriptional regulator, LysR family n=28 Tax=... 278 1e-73 UniRef50_A5W7U4 Transcriptional regulator, LysR family n=17 Tax=... 278 1e-73 UniRef50_B5JN19 Putative uncharacterized protein n=1 Tax=Verruco... 278 2e-73 UniRef50_B5JQV8 LysR substrate binding domain protein n=1 Tax=Ve... 278 2e-73 UniRef50_D0J169 Transcriptional regulator, LysR family n=12 Tax=... 277 2e-73 UniRef50_A4G228 Transcriptional regulatory protein, LysR family ... 277 2e-73 UniRef50_UPI00004DBCAD UPI00004DBCAD related cluster n=2 Tax=Xen... 277 2e-73 UniRef50_C8WUA0 Transcriptional regulator, LysR family n=1 Tax=A... 277 3e-73 UniRef50_Q97DV9 Transcriptional regulator, LysR family n=1 Tax=C... 277 3e-73 UniRef50_C9KJX6 Transcriptional regulator, LysR family n=2 Tax=V... 277 3e-73 UniRef50_C6DBU7 Transcriptional regulator, LysR family n=4 Tax=P... 277 4e-73 UniRef50_A8RPQ8 Putative uncharacterized protein n=2 Tax=Clostri... 277 4e-73 UniRef50_Q6ANM2 Related to transcriptional regulator n=3 Tax=Des... 277 4e-73 UniRef50_C0CUF5 Putative uncharacterized protein n=1 Tax=Clostri... 277 4e-73 UniRef50_C6D0V7 Transcriptional regulator, LysR family n=4 Tax=B... 276 9e-73 UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=C... 276 9e-73 UniRef50_B0MH18 Putative uncharacterized protein n=4 Tax=Bacteri... 276 1e-72 UniRef50_C3X7G6 Transcriptional regulator n=2 Tax=Oxalobacter fo... 276 1e-72 UniRef50_A1VNR0 Transcriptional regulator, LysR family n=2 Tax=C... 275 1e-72 UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=M... 275 1e-72 UniRef50_Q1IHL3 Transcriptional regulator, LysR family n=1 Tax=C... 275 2e-72 UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Sy... 275 2e-72 UniRef50_B4CXF3 Transcriptional regulator, LysR family n=1 Tax=C... 275 2e-72 UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillace... 275 2e-72 UniRef50_B9KUK0 Transcriptional regulator n=2 Tax=Rhodobacterace... 275 2e-72 UniRef50_A4J4H0 Transcriptional regulator n=1 Tax=Desulfotomacul... 275 2e-72 UniRef50_C9RA29 Transcriptional regulator, LysR family n=1 Tax=A... 274 2e-72 UniRef50_C5BDD2 HTH-type transcriptional regulator AlsR n=2 Tax=... 274 2e-72 UniRef50_A7ZAS3 YybE n=1 Tax=Bacillus amyloliquefaciens FZB42 Re... 274 2e-72 UniRef50_B8FI63 Transcriptional regulator, LysR family n=1 Tax=D... 274 2e-72 UniRef50_B7RV59 LysR substrate binding domain protein n=1 Tax=ma... 274 3e-72 UniRef50_Q2BJH5 LysR-family transcriptional regulator n=1 Tax=Ne... 274 3e-72 UniRef50_Q3SFM8 Transcriptional regulator n=3 Tax=Proteobacteria... 273 4e-72 UniRef50_A1WRQ7 Transcriptional regulator, LysR family n=2 Tax=B... 273 4e-72 UniRef50_C4V4C8 Transcriptional regulator n=2 Tax=Selenomonas Re... 273 5e-72 UniRef50_A6SW66 Transcriptional regulator, LysR family n=1 Tax=J... 273 5e-72 UniRef50_C8T378 LysR family transcriptional regulator n=1 Tax=Kl... 273 5e-72 UniRef50_A4WZV0 Transcriptional regulator, LysR family n=1 Tax=R... 273 6e-72 UniRef50_A6VUM5 Transcriptional regulator, LysR family n=2 Tax=G... 273 7e-72 UniRef50_A6F002 Transcriptional regulator, LysR family protein n... 273 7e-72 UniRef50_B8G0Z2 Transcriptional regulator, LysR family n=4 Tax=F... 272 8e-72 UniRef50_A3ZYQ6 Transcriptional regulator, LysR family protein n... 272 8e-72 UniRef50_C1A9Z7 LysR family transcriptional regulator n=1 Tax=Ge... 272 8e-72 UniRef50_Q0EX23 Transcriptional Regulator, LysR family protein n... 272 1e-71 UniRef50_Q1LN85 Transcriptional regulator, LysR family n=1 Tax=C... 272 1e-71 UniRef50_B2I0F8 Transcriptional regulator n=13 Tax=Acinetobacter... 272 1e-71 UniRef50_D2P368 Transcription activator of glutamate synthase op... 272 1e-71 UniRef50_Q15VE5 Transcriptional regulator, LysR family n=1 Tax=P... 272 1e-71 UniRef50_Q1YUD1 Probable transcriptional regulator n=1 Tax=gamma... 272 1e-71 UniRef50_B1ZUQ0 Transcriptional regulator, LysR family n=1 Tax=O... 272 1e-71 UniRef50_Q13GE5 Transcriptional regulator, LysR family n=1 Tax=B... 272 1e-71 UniRef50_P77559 Uncharacterized HTH-type transcriptional regulat... 272 1e-71 UniRef50_B4ETA7 LysR-family transciptional regulator n=37 Tax=En... 272 1e-71 UniRef50_Q67KY5 LysR family transcriptional regulator n=1 Tax=Sy... 272 1e-71 UniRef50_Q1QWP3 Transcriptional regulator, LysR family n=1 Tax=C... 271 2e-71 UniRef50_B7X0F3 Transcriptional regulator, LysR family n=1 Tax=C... 271 2e-71 UniRef50_B1Y3F3 Transcriptional regulator, LysR family n=2 Tax=B... 271 2e-71 UniRef50_D0Z9H4 Transcriptional regulator, LysR family n=40 Tax=... 271 3e-71 UniRef50_A1W6X9 Transcriptional regulator, LysR family n=19 Tax=... 271 3e-71 UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Ac... 270 4e-71 UniRef50_D2QVQ4 Transcriptional regulator, LysR family n=22 Tax=... 270 4e-71 UniRef50_C1M4D9 Putative uncharacterized protein n=2 Tax=Citroba... 270 4e-71 UniRef50_B5XVV4 Transcriptional regulator cynR n=5 Tax=Enterobac... 270 4e-71 UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=R... 270 5e-71 UniRef50_Q12EW2 Transcriptional regulator, LysR family n=1 Tax=P... 270 5e-71 UniRef50_A9AT14 LysR family transcriptional regulator n=11 Tax=B... 270 5e-71 UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=G... 269 8e-71 UniRef50_A6DK62 Hydrogen peroxide-inducible genes activator n=1 ... 269 9e-71 UniRef50_A9B3V4 Transcriptional regulator, LysR family n=1 Tax=H... 269 1e-70 UniRef50_B4CZS1 Transcriptional regulator, LysR family n=1 Tax=C... 269 1e-70 UniRef50_B7X3R9 Transcriptional regulator, LysR family n=1 Tax=C... 268 1e-70 UniRef50_UPI0000E0F9F3 Transcriptional Regulator, LysR family pr... 268 2e-70 UniRef50_A4J6T9 Transcriptional regulator, LysR family n=1 Tax=D... 268 2e-70 UniRef50_UPI000178A8A2 transcriptional regulator, LysR family n=... 268 2e-70 UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=... 268 2e-70 UniRef50_A9F7Y4 Transcriptional regulator, LysR family n=1 Tax=S... 268 2e-70 UniRef50_A6SUU1 OxyR hydrogen peroxide-inducible genes activator... 268 2e-70 UniRef50_B8IJK2 Transcriptional regulator, LysR family n=1 Tax=M... 267 3e-70 UniRef50_A3JD31 Transcriptional regulator, LysR family protein n... 267 3e-70 UniRef50_C5CQD2 Transcriptional regulator, LysR family n=1 Tax=V... 267 3e-70 UniRef50_B4DCH5 Transcriptional regulator, LysR family n=1 Tax=C... 267 4e-70 UniRef50_A6T102 Transcriptional regulator, LysR family n=1 Tax=J... 267 4e-70 UniRef50_C9YD50 RuBisCO operon transcriptional regulator n=1 Tax... 266 5e-70 UniRef50_C6E9D5 Transcriptional regulator, LysR family n=8 Tax=D... 266 5e-70 UniRef50_Q7NCX0 LysR family transcriptional regulatory protein n... 266 7e-70 UniRef50_UPI0001C36638 LysR family transcriptional regulator n=1... 266 8e-70 UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=P... 266 8e-70 UniRef50_C0Z4V5 Transcriptional regulator n=1 Tax=Brevibacillus ... 266 9e-70 UniRef50_A6VX33 Transcriptional regulator, LysR family n=2 Tax=M... 266 9e-70 UniRef50_B8FZV1 Transcriptional regulator, LysR family n=2 Tax=D... 266 1e-69 UniRef50_A3VLP1 LysR family transcriptional regulatory protein n... 266 1e-69 UniRef50_P0ACR6 Uncharacterized HTH-type transcriptional regulat... 266 1e-69 UniRef50_B6R6F6 Transcriptional regulator, LysR family n=1 Tax=P... 265 1e-69 UniRef50_Q7W708 Putative LysR-family transcriptional regulator n... 265 1e-69 UniRef50_Q21B31 Transcriptional regulator, LysR family n=2 Tax=A... 265 2e-69 UniRef50_Q4ZQQ6 Regulatory protein, LysR:LysR, substrate-binding... 265 2e-69 UniRef50_B7RS92 Regulatory protein, LysR:LysR, substrate-binding... 264 2e-69 UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=C... 264 2e-69 UniRef50_A8VYP9 Conserved repeat domain n=1 Tax=Bacillus selenit... 264 2e-69 UniRef50_C9PJ12 Putative transcriptional regulator protein n=1 T... 264 2e-69 UniRef50_Q1DCG4 Transcriptional regulator, LysR family n=2 Tax=C... 264 2e-69 UniRef50_A6SXB4 Transcriptional regulator, LysR family n=1 Tax=J... 264 3e-69 UniRef50_Q01RY1 Transcriptional regulator, LysR family n=1 Tax=C... 264 3e-69 UniRef50_A3IAK3 Transcriptional regulators, LysR family protein ... 264 3e-69 UniRef50_Q3MEY8 Transcriptional regulator, LysR family n=1 Tax=A... 264 4e-69 UniRef50_Q1N6N4 Transcriptional regulator, LysR family protein n... 263 5e-69 UniRef50_A0JW92 Transcriptional regulator, LysR family n=3 Tax=M... 263 5e-69 UniRef50_B1M0B1 Transcriptional regulator, LysR family n=24 Tax=... 263 6e-69 UniRef50_D1WWA8 Transcriptional regulator, LysR family n=7 Tax=S... 263 6e-69 UniRef50_Q0BXT0 Putative oxidative stress regulatory protein Oxy... 262 8e-69 UniRef50_Q1AVR3 Transcriptional regulator, LysR family n=1 Tax=R... 262 8e-69 UniRef50_B2HU56 Transcriptional regulator n=17 Tax=Acinetobacter... 262 8e-69 UniRef50_A6X7A0 Transcriptional regulator, LysR family n=1 Tax=O... 262 9e-69 UniRef50_C8WSN1 Transcriptional regulator, LysR family n=1 Tax=A... 262 1e-68 UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellula... 262 1e-68 UniRef50_A8II36 Putative transcriptional regulator n=1 Tax=Azorh... 262 1e-68 UniRef50_Q67MJ1 LysR family transcriptional regulator n=1 Tax=Sy... 262 1e-68 UniRef50_A6GDN8 Transcriptional regulator n=1 Tax=Plesiocystis p... 262 1e-68 UniRef50_Q2RQL6 Transcriptional regulator, LysR family n=2 Tax=R... 262 1e-68 UniRef50_UPI0001744D79 transcriptional regulator, LysR family pr... 262 1e-68 UniRef50_Q7W9G9 Probable LysR-family transcriptional regulator n... 262 2e-68 UniRef50_A0K8T5 Transcriptional regulator, LysR family n=55 Tax=... 261 2e-68 UniRef50_B9TDR3 HTH-type transcriptional regulator xapR, putativ... 261 2e-68 UniRef50_Q12AP3 Transcriptional regulator, LysR family n=4 Tax=B... 261 2e-68 UniRef50_A4JMP2 Transcriptional regulator, LysR family n=1 Tax=B... 261 2e-68 UniRef50_C7RPQ0 Transcriptional regulator, LysR family n=1 Tax=C... 261 2e-68 UniRef50_Q167Q4 Oxidative stress transcription regulator, oxyR, ... 261 2e-68 UniRef50_A8FJ94 Possible LysR family transcriptional regulator n... 261 2e-68 UniRef50_Q3SGH4 Oxidative stress transcriptional regulator n=2 T... 261 3e-68 UniRef50_Q1GX89 Transcriptional regulator, LysR family n=13 Tax=... 261 3e-68 UniRef50_C8WV81 Transcriptional regulator, LysR family n=2 Tax=A... 261 3e-68 UniRef50_Q3A466 Transcriptional regulator, LysR family n=6 Tax=D... 260 4e-68 Sequences not found previously or not previously below threshold: UniRef50_Q3AG03 Transcriptional regulator, LysR family n=2 Tax=C... 290 4e-77 UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=G... 289 7e-77 UniRef50_C9RY94 Transcriptional regulator, LysR family n=8 Tax=B... 283 6e-75 UniRef50_A5D2L1 Transcriptional regulator n=1 Tax=Pelotomaculum ... 281 2e-74 UniRef50_P20668 HTH-type transcriptional regulator gltC n=17 Tax... 281 3e-74 UniRef50_B8K739 Transcriptional regulator, substrate-binding of ... 278 2e-73 UniRef50_Q9F1R2 HTH-type transcriptional activator cmpR n=38 Tax... 277 4e-73 UniRef50_Q0AZ61 Transcriptional regulator, LysR family n=1 Tax=S... 276 9e-73 UniRef50_A4F7Y9 Transcriptional regulator, LysR family n=3 Tax=A... 275 1e-72 UniRef50_B4WMZ4 Putative uncharacterized protein n=1 Tax=Synecho... 272 1e-71 UniRef50_B9ZSB8 Transcriptional regulator, LysR family n=4 Tax=B... 272 1e-71 UniRef50_C6D0W9 Transcriptional regulator, LysR family n=1 Tax=P... 271 2e-71 UniRef50_Q04778 HTH-type transcriptional regulator alsR n=87 Tax... 271 3e-71 UniRef50_C9KJ25 Transcriptional regulator GltC n=1 Tax=Mitsuokel... 270 4e-71 UniRef50_Q5X4A2 Hydrogen peroxide-inducible genes activator n=4 ... 270 4e-71 UniRef50_C7I0K1 Transcriptional regulator, LysR family n=1 Tax=T... 270 4e-71 UniRef50_A4XTW7 Transcriptional regulator, LysR family n=1 Tax=P... 270 4e-71 UniRef50_C4ZHT7 Transcription activator of glutamate synthase(Ly... 268 1e-70 UniRef50_Q0F2Z7 Transcriptional regulatory protein, LysR family ... 268 2e-70 UniRef50_A1SY80 Transcriptional regulator, LysR family n=1 Tax=P... 268 2e-70 UniRef50_C9PFK4 Transcriptional regulator substrate-binding of L... 268 2e-70 UniRef50_D1VD43 Transcriptional regulator, LysR family n=1 Tax=F... 267 3e-70 UniRef50_Q7NKC0 Nitrogen assimilation transcriptional activator ... 267 4e-70 UniRef50_A7IBY1 Transcriptional regulator, LysR family n=15 Tax=... 266 7e-70 UniRef50_B8CTJ9 Regulatory protein, LysR:LysR, substrate-binding... 266 9e-70 UniRef50_Q5WCI6 LysR family transcriptional activator of glutama... 266 9e-70 UniRef50_C3LMU4 Transcriptional regulator, LysR family n=65 Tax=... 266 1e-69 UniRef50_A8ZUD0 Transcriptional regulator, LysR family n=1 Tax=D... 265 1e-69 UniRef50_B3DZ70 Transcriptional regulator, LysR/CysB family n=5 ... 265 1e-69 UniRef50_C2BX95 Transcriptional regulator n=1 Tax=Listeria grayi... 265 1e-69 UniRef50_Q2J7C4 Transcriptional regulator, LysR family n=22 Tax=... 265 2e-69 UniRef50_C1ZI46 Transcriptional regulator, COG0583 n=1 Tax=Planc... 264 2e-69 UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=T... 264 2e-69 UniRef50_B5JV63 LysR protein n=1 Tax=gamma proteobacterium HTCC5... 264 4e-69 UniRef50_UPI000178812A transcriptional regulator, LysR family n=... 263 5e-69 UniRef50_B9MIR3 Transcriptional regulator, LysR family n=4 Tax=B... 263 5e-69 UniRef50_C5BEX8 Transcriptional regulator, LysR family n=12 Tax=... 263 7e-69 UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Sy... 262 1e-68 UniRef50_Q1AYT0 Transcriptional regulator, LysR family n=1 Tax=R... 261 2e-68 UniRef50_P42722 HTH-type transcriptional regulator cfxR n=9 Tax=... 261 3e-68 UniRef50_C6NW00 Transcriptional regulator, LysR family n=1 Tax=A... 261 3e-68 >UniRef50_P0ACR7 Uncharacterized HTH-type transcriptional regulator yfeR n=158 Tax=Proteobacteria RepID=YFER_ECOLI Length = 308 Score = 400 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 308/308 (100%), Positives = 308/308 (100%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT Sbjct: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP Sbjct: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE Sbjct: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS Sbjct: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR Sbjct: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 Query: 301 EGDPLYQI 308 EGDPLYQI Sbjct: 301 EGDPLYQI 308 >UniRef50_Q475G5 Regulatory protein, LysR:LysR, substrate-binding n=9 Tax=Betaproteobacteria RepID=Q475G5_RALEJ Length = 304 Score = 333 bits (855), Expect = 5e-90, Method: Composition-based stats. Identities = 153/291 (52%), Positives = 204/291 (70%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MNY+L+QL+VF+ VA+ FSRA + +GL+QSA+S V ELE GVRLLDRTTREVVLT Sbjct: 1 MNYTLRQLRVFLAVAETGGFSRAADAVGLTQSAISRGVAELEESLGVRLLDRTTREVVLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AGQ LA LERLL +L+ TL DT +G+ G+V +A + TISA L+P +A +YP Sbjct: 61 HAGQALAPALERLLGQLDDTLEDTRELGEHYRGRVVIAGAPTISARLMPMYVAACAAQYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +I+ + D Q +E +R G VDFG++IDP L E ++++PF +C RD LA E Sbjct: 121 EIRLTVRDNVQADGIEQVRAGGVDFGVLIDPLVHDGLTIEPLVTDPFCFVCRRDHPLAQE 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 VPW AL G +LVL D+ASGSRPLID R+GI +VQE+GH A++F MV AGIG S Sbjct: 181 KTVPWSALDGMRLVLLDFASGSRPLIDRVFGRHGIVPRVVQELGHSASVFGMVEAGIGAS 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 +LP +LPLP SPLV + + P ER++++VRR++RSLS AAEA+W +VR+ Sbjct: 241 VLPTYSLPLPAASPLVWRPLVPREERRIVMVRREDRSLSPAAEAVWALVRN 291 >UniRef50_Q0KE24 Transcriptional regulator, LysR-family n=2 Tax=Cupriavidus RepID=Q0KE24_RALEH Length = 305 Score = 321 bits (825), Expect = 1e-86, Method: Composition-based stats. Identities = 149/290 (51%), Positives = 201/290 (69%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MNY+L+QL+VF+ VA FSRA + +GL+Q AVS V ELE GVRLLDRTTREVVLT Sbjct: 1 MNYTLRQLRVFLAVANTGGFSRAADVVGLTQPAVSRGVAELEEALGVRLLDRTTREVVLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG LA LERLL +L+ TL +T ++G++ G+V +A + TISA L+P +A +YP Sbjct: 61 EAGHALAPALERLLGQLDDTLEETRQLGERYRGRVVIAGAPTISARLMPLYVAACAAQYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +I+ + D Q +E +R G VDFG++IDP L E + ++PF +C RD LA Sbjct: 121 EIRLTVRDNVQADGLEQVRAGAVDFGVLIDPLVRDGLVVEPVATDPFCFVCRRDHPLAQS 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 VPW AL G +LVL D+ASGSRPLID R+G+ +VQE+GH A++F MV AGIG S Sbjct: 181 PSVPWAALHGMQLVLLDFASGSRPLIDRVFGRHGVVPLVVQELGHSASVFGMVEAGIGAS 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 +LP+ +LPLP SPLV + + P ER +++VRR++RSLS AA A+WD+VR Sbjct: 241 VLPSFSLPLPAASPLVWRPLVPCEERSIVMVRREDRSLSPAAAAVWDLVR 290 >UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AG49_CARHZ Length = 297 Score = 316 bits (810), Expect = 9e-85, Method: Composition-based stats. Identities = 87/297 (29%), Positives = 147/297 (49%), Gaps = 7/297 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN + QL++F VA++KSFS A + +SQ A+S ++ LE + G +LLDRTT+ V LT Sbjct: 1 MNRN--QLEIFRVVAEKKSFSEAARLLHISQPAISMHIQALEEYYGTKLLDRTTKRVTLT 58 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG+ L LL ++ RD + + GK+ + AS TI H++P ++ +R+YP Sbjct: 59 PAGEILYKYTLHLLSLMDKAQRDISQAAGIIKGKLILGASLTIGGHVLPPLLSSFYRKYP 118 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 D+ + + V+E + +D G V G+L EA+ + ++ + LA Sbjct: 119 DVNITMEIMNTEKVLERVSDLTLDLGFVEGEVTTGELHVEALARDELVVVVAANHPLAGR 178 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGI---QANIVQEIGHPATLFPMVAAGI 237 + W+ L LV+++ SG+R +I+ L G + IV E+G + V AG+ Sbjct: 179 GRISWEELATLPLVMREPGSGTRKVIEERLQAAGFKLPELKIVMELGSTEAIKGAVEAGL 238 Query: 238 GISILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 G +IL + + G + + R+ +V N+ S A +AL R+ Sbjct: 239 GAAILSKWTVRREINWGIFKQLLIENLPIYREFYVVLNNNKFHSPATQALIQFCREH 295 >UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Proteobacteria RepID=B9JIM7_AGRRK Length = 306 Score = 315 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 104/290 (35%), Positives = 163/290 (56%), Gaps = 1/290 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +N + L+ F V + +SF RA E + +SQ A++ +++LE G LLDRTTR V T Sbjct: 3 INCEILDLRAFQAVVELESFHRAAEALHISQPALTRRIQKLEQSIGAPLLDRTTRHVAPT 62 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 GQ++ + R+L+E + +L G Q G + +A T + + +P I R YP Sbjct: 63 ATGQEMIPLVRRMLEEFDGSLFAIKDSGSQRRGLITMACVPTAAFYFLPTVIRTFGRDYP 122 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ + D ++++ +G+V+FGI + DL E ++ +PF L +D LA Sbjct: 123 HIRLRIRDLTANEGLQAVARGEVEFGINLMGNSDPDLSFEPLIDDPFVLAMRKDHPLAAF 182 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 D + W L+G LV+ D +SG+R L+DAALAR ++ N E+ H T +V AG+GIS Sbjct: 183 DEIHWNQLEGHPLVVVDRSSGNRTLLDAALARANLRLNWFYEVTHLNTSLGLVEAGLGIS 242 Query: 241 ILPALALPLPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVV 289 +LP LA P E LV + I PVV R + +VRR++ +LS AA+ D++ Sbjct: 243 VLPRLATPQEEHPFLVTRPIVNPVVTRTIGIVRRRSATLSPAADRFIDML 292 >UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=Bacillales RepID=A9VF88_BACWK Length = 305 Score = 309 bits (794), Expect = 5e-83, Method: Composition-based stats. Identities = 66/297 (22%), Positives = 138/297 (46%), Gaps = 1/297 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 ++ L+QL+ F+ V++E F+RA E++ +SQ ++S ++ LE+ G+ L DR +++ LT Sbjct: 7 ISIELRQLEYFLAVSKELHFTRAAEKLNISQPSLSQQIRALEHEVGMPLFDRIGKKISLT 66 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+ L + + E+ + G + + + T+ +L+P I + +++YP Sbjct: 67 EAGRVLLSHSKTIFHEVEQARSAIQDLNGLHHGSLTIGSLLTVVNYLLPPAILDFNKQYP 126 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +I+ + + E + Q ++D GI P ++ + L+ +L Sbjct: 127 NIELSVLGLRTGEIREKLLQNELDIGITFLPVQDKEIVSIPLYKSELTLVVPTSHSLTER 186 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 YV + LQ L+L LI + + + EI +L MVA G+GI+ Sbjct: 187 KYVSIEELQDYPLILLPKNFYLTELITSHCQNFNFKPKPILEISTMESLIQMVAQGMGIT 246 Query: 241 ILPALALPLPEGSPL-VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 +LP + + + +K P + L+ R+++ + A + ++ ++L Sbjct: 247 VLPKPYIDFLQNEHIQAIKIENPTPTIDIGLIYRRDKYMCAATRKFIEQLKITVHSL 303 >UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZY7_9GAMM Length = 318 Score = 309 bits (793), Expect = 7e-83, Method: Composition-based stats. Identities = 98/293 (33%), Positives = 156/293 (53%), Gaps = 1/293 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN SL+QL+ FVT+AQ +SF+ A E + LSQ A+S ++K +E TG L R+TR + L+ Sbjct: 21 MNVSLRQLRAFVTLAQSQSFAEASELLHLSQPALSVAIKNMEQETGGSLFSRSTRSLQLS 80 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+Q RLL + + D GR GK+RVA + + + P+ +A R YP Sbjct: 81 PEGRQFLPVARRLLADWDQAFDDLGRAFNLQQGKIRVAVMPSFAMNQFPEALAPFQREYP 140 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 DI + D + V++++R+G V+ GI +P + L+ + ++ + L H S LA Sbjct: 141 DINISVEDVVMESVIDAVREGQVELGITFEPDQMDGLEFTPLFTDRWIALVHPKSPLAAR 200 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W AL + + S SR + AL+ G+ + E AT+ MV+ G+G + Sbjct: 201 KKLSWTALMEEPFIAMNRGSWSRNTTEKALSEAGVTPTRLLEANQLATIGRMVSVGLGTA 260 Query: 241 ILPALALPLPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 ++P L E ++ K I P +ERQ+ + RK RSLS AA+AL + + Sbjct: 261 VVPQLCRQQMESLGILCKTIGRPSIERQVGIFTRKRRSLSGAAQALIAHLLEH 313 >UniRef50_P39592 Uncharacterized HTH-type transcriptional regulator ywbI n=9 Tax=Bacillales RepID=YWBI_BACSU Length = 301 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 72/286 (25%), Positives = 128/286 (44%), Gaps = 1/286 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++ L F+ VA+ KSF++A + + +SQ +S +K LE G+ L R R+V LTDA Sbjct: 1 MDIRHLTYFLEVARLKSFTKASQSLYVSQPTISKMIKNLEEELGIELFYRNGRQVELTDA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G + ++ + ++ + + + + G VR+ I + P+ + + YP++ Sbjct: 61 GHSMYVQAQEIIKSFQNLTSELNDIMEVKKGHVRIGLPPMIGSGFFPRVLGDFRENYPNV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 F L + V E + G +D G+V+ P I+ E L+ H LA E Sbjct: 121 TFQLVEDGSIKVQEGVGDGSLDIGVVVLPANEDIFHSFTIVKETLMLVVHPSHRLADEKE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L+ + I + G + +I+ E + MV+A +GI +L Sbjct: 181 CQLRELKDEPFIFFREDFVLHNRIMTECIKAGFRPHIIYETSQWDFISEMVSANLGIGLL 240 Query: 243 P-ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWD 287 P + L V+ + PV+ L ++ RK+R LS AA A + Sbjct: 241 PERICRGLDPEKVKVIPLVDPVIPWHLAIIWRKDRYLSFAARAWLE 286 >UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945AE Length = 303 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 75/291 (25%), Positives = 141/291 (48%), Gaps = 1/291 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++ LK F+ V + KSF++A + + ++Q +S +K +E+ GV LLDR+T++V+LTDA Sbjct: 7 LDIRHLKYFIEVVRCKSFTKAADVLHITQPTISKMIKNIEDELGVVLLDRSTKQVMLTDA 66 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ + L+ ++++ + + GK+R+ + + P I E H +YP+I Sbjct: 67 GQSILLQAQQIVKSFENLSIELANTIHLKKGKIRMGLPPMVGSRFFPHIIGEFHHKYPNI 126 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L + + V E + +G +D G+V+ P P G + E ++ + LA + Sbjct: 127 EIQLIEEGAKKVEEQVEEGHLDIGVVLLPIPSGTFDSFPFVHEKLMVVVYPKHRLAGQTV 186 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + L+ +L I R G Q +V E + MVAAG+GIS+L Sbjct: 187 IALKKLEHEPFILFREGFVLHDRIPEECIRAGFQPKVVYESSQWDFISEMVAAGLGISML 246 Query: 243 PA-LALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 P + L + + + P ++ L ++ K + +S A + V+ + Sbjct: 247 PESICRELNPNRVITIPLVEPSIDWSLAMIWPKEQYISYAVREWINFVKQR 297 >UniRef50_C6P9X7 Transcriptional regulator, LysR family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P9X7_CLOTS Length = 297 Score = 304 bits (780), Expect = 2e-81, Method: Composition-based stats. Identities = 73/291 (25%), Positives = 149/291 (51%), Gaps = 2/291 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ + ++L +F++V + S S A + ++Q A+S ++ ELE ++L DR +++VLT Sbjct: 1 MDMNFRELNIFLSVCELGSMSEAARHLYMTQPAISQAISELEGEYNIKLFDRIGKKLVLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG+ L +++ LN + GK+++ AS+T+ +L+PQ I E + Y Sbjct: 61 HAGEILRDYGKKINLLLNEAENTLRDISDMKMGKLKLGASRTVGTYLLPQLIGEFLKIYK 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +I+ + +++ I + ++D GIV P +++ + L + +L+C +D A + Sbjct: 121 NIELPFYIDNTSEIVKMIHENEIDLGIVEGPIHSDNIEVKYFLDDELYLICSKDHNWAKK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + L +++++ SG+R + + L + I+ NI E+ + V A +G+S Sbjct: 181 KIINKDDLSLENIIIREVGSGTREVFENTLKAHNIEYNIKLELNSTEAIKRAVEANLGVS 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVE--RQLMLVRRKNRSLSTAAEALWDVV 289 ++ LA+ S +VK V+ RQL ++ K++ LS + D + Sbjct: 241 VISKLAIKEELKSSRLVKVEIDGVKFLRQLNIIYHKDKYLSELCKKFIDFL 291 >UniRef50_A4J1K6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1K6_DESRM Length = 308 Score = 303 bits (778), Expect = 4e-81, Method: Composition-based stats. Identities = 75/294 (25%), Positives = 150/294 (51%), Gaps = 5/294 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M SL Q +F TVA +KSFS A + + +SQ AVS +K LE+H +L DR T++V +T Sbjct: 1 MLLSLYQFHIFKTVADKKSFSGAAQALYISQPAVSMHIKALEDHFRTKLFDRNTQQVTIT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+ L +++L+ ++ D R + G + + AS T+ ++IP+ + ++ +P Sbjct: 61 EAGRILYKYADKILNLIDQAENDISRFTGNIEGPLSIGASFTVGEYVIPKILGTFNKEHP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ +L + ++ + + ++D G++ + +L + L + ++ D L+ Sbjct: 121 QVRALLQVTNTEQIVNLVLKQEIDLGLIENQVNKTELVAKPFLQDELIIVIPPDYPLSEH 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGI---QANIVQEIGHPATLFPMVAAGI 237 ++ + L LV+++ SG+R + +A L G+ NIV E+G + V AG Sbjct: 181 QFISMEDLVALPLVMREQGSGTRKITEARLIEEGVDLNTLNIVMELGSTEAVKEAVEAGF 240 Query: 238 GISILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 G +I+ A+ L G+ + V+ + R+ L+ +++ +T E + Sbjct: 241 GTTIISKWAVQKELKLGTLVPVRFKDISLFRKFYLIYHRDKFQTTVVEEFITFL 294 >UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepID=A9W9P6_CHLAA Length = 301 Score = 303 bits (777), Expect = 5e-81, Method: Composition-based stats. Identities = 82/292 (28%), Positives = 133/292 (45%), Gaps = 1/292 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ F VA+ +RA + ++Q A+S + +LE G+ L DR R + LT+A Sbjct: 1 MELRHLRYFEAVARHSHVTRAAAELHIAQPALSKQISQLERELGITLFDRVGRSLRLTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L +L ++ +G+V + A T+ AHL+P + H+RYP I Sbjct: 61 GEALLPYARAILAQVEEARAAMAERIGLKAGRVTIGAPPTVGAHLLPPLLTIFHQRYPGI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 LH+ Q +++ + G D +V P L +L+EP L+ LA Sbjct: 121 TLRLHEAGIQSLLDLLEAGITDLAVVALPVTDEQLTVTPLLNEPLVLIVSTTHPLARRSE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V L+ + +L + R A G V E G TL VAAG+G+S++ Sbjct: 181 VMMTELRHERWILSPSSYELREATLKACREAGFTPQTVLEGGETETLVRFVAAGLGVSLV 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 PALA+ + + + R L LV R +R+ S AA AL + + ++ Sbjct: 241 PALAVA-GCTDVVRLTVSDQHLTRSLGLVWRSDRTASPAARALREFLVNEVR 291 >UniRef50_P52696 Uncharacterized HTH-type transcriptional regulator ybhD n=68 Tax=Proteobacteria RepID=YBHD_ECOLI Length = 317 Score = 303 bits (777), Expect = 5e-81, Method: Composition-based stats. Identities = 94/290 (32%), Positives = 159/290 (54%), Gaps = 1/290 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M + L +K FV +A+ SF+ A + + ++Q A++ +K++E V+L +RTTR+V LT Sbjct: 1 MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHVQLFERTTRKVTLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG++L L+ + + TL + M G V +A T + +P I + + YP Sbjct: 61 KAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +I+ + ++ MES+ + DFGI ++ + +++EPF L C RD LA + Sbjct: 121 NIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAKK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V WQ L G K++ +SG+R LI+ LA + + E+ H +T +V AG+GIS Sbjct: 181 QLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGIS 240 Query: 241 ILPALALPLPEGSPLV-VKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 LP LA+P S ++ + + PV+ R L ++RRK+ LS AAE + ++ Sbjct: 241 ALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFALL 290 >UniRef50_C6C982 Transcriptional regulator, LysR family n=1 Tax=Dickeya dadantii Ech703 RepID=C6C982_DICDC Length = 298 Score = 303 bits (777), Expect = 6e-81, Method: Composition-based stats. Identities = 136/294 (46%), Positives = 197/294 (67%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N SL+QL++F+ VA+ FSRAG + L+QSA+SHS+ +LEN G+RL +RTTREV+LT Sbjct: 5 NISLRQLRIFLAVAEHHGFSRAGNMMSLTQSAMSHSIGDLENELGIRLFERTTREVLLTQ 64 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 G +L+ L R+L EL +TL +T ++ G V VA S TISA ++P CIA+ YP Sbjct: 65 EGAELSEALRRVLGELETTLCNTQSRAERRRGLVHVATSPTISAGIMPDCIAQIAENYPQ 124 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + ++HDR QQ M+ + G+VDFG++I+P DL E + EPF L+ + +A Sbjct: 125 VNLIIHDRVQQQAMQMVLNGEVDFGVIIEPSVPSDLYTETFMEEPFCLVLPENHQIARLK 184 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V W LQ ++VL DYASGSRPLID AL R+G+ +++QE+GH T+F ++ +GIG+S+ Sbjct: 185 QVTWHDLQNQEMVLLDYASGSRPLIDNALIRHGVTPHVIQELGHVTTIFRILQSGIGVSV 244 Query: 242 LPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 +P LAL E S L V+++ P+ R+L LVRR+N SLSTAA A+W +++ A Sbjct: 245 IPQLALSSLECSGLAVRQLWPIENRRLQLVRRRNHSLSTAATAIWTLIQTLCQA 298 >UniRef50_UPI0001745DD5 transcriptional regulator, LysR family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745DD5 Length = 290 Score = 303 bits (777), Expect = 6e-81, Method: Composition-based stats. Identities = 71/290 (24%), Positives = 128/290 (44%), Gaps = 1/290 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L QL+ V VA+ +FSRA + +SQ ++S +++LE+ G RL DR R LT A Sbjct: 1 MELHQLRYMVAVARTGNFSRAAQTCHVSQPSLSQQIQKLEDELGERLFDRLRRHAKLTQA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G++ R R+L+E+++ R+ G++ V TI+ +L+P+ IA +YP + Sbjct: 61 GERFLPRAVRILEEMDAATREARAANDLDQGRITVGVLPTIAPYLLPKLIAAFSAKYPGV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 Q V+H+ + E +VD I P + + E L + L + Sbjct: 121 QVVVHEDTTARLRELTAACEVDIAIASLPLQDERFEVRELFDEELLLALPNNHRLVDQKK 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + L K +L + R + T+ +V +G+GI+++ Sbjct: 181 IIPEDLLEEKFILMKEGHCLGDQVLHFCHRQDFHPQVSCRSAQMETVQSLVQSGMGITLV 240 Query: 243 PALALPLPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 P +AL V + + P +R ++ + R L AA A ++ + Sbjct: 241 PRMALQEDRSVKPVYRSLSDPSPKRTIVAFWPRQRPLGKAAAAWLKLMEE 290 >UniRef50_Q46WQ0 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46WQ0_RALEJ Length = 304 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 97/296 (32%), Positives = 168/296 (56%), Gaps = 2/296 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN SL+QL+ F+ VAQE+ F+RA E++ LSQS+VS + ELE++ G++L DR TR++ +T Sbjct: 7 MNVSLRQLRAFIAVAQERHFTRAAEKLDLSQSSVSALIHELEDNLGLKLFDRHTRQLHIT 66 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG++L +++ + +++S + + + G+V +AAS +A ++P+ I E +P Sbjct: 67 QAGEELLPLVKKAVADIDSAIETSSELRTLGRGRVSIAASSIQAALMLPRFIREFSLGHP 126 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ +HD + V + + G+VDFGI P DL + ++PF ++ D L Sbjct: 127 GVKVDIHDVSEHEVPKMVSSGEVDFGIGTIPEGQPDLTAHRLSTDPFVIVMPPDHPLLRR 186 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W+ + L+ + R +D ALA GI + + E+ P T+ MV AG+GI+ Sbjct: 187 KTLRWEDVAPIPLIGPHKGNPIRDCLDTALAARGITLSRLHEVLLPLTMVGMVEAGLGIA 246 Query: 241 ILPALALPLPEGSPLV-VKRITPVVERQLMLVRRKNRSLSTAAEALWDVV-RDQGN 294 ++ A L E L V PV+ R++ L+ +RSLS A+ D++ R++GN Sbjct: 247 VMSAAVTRLTEALGLATVMPTDPVIHREISLLVHADRSLSPPAQRFRDLLMRNRGN 302 >UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KMT5_9GAMM Length = 300 Score = 300 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 86/292 (29%), Positives = 150/292 (51%), Gaps = 1/292 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M + Q+ F VA+ SF+ A R+ LSQ A+S ++K LE G +L RTTR V LT Sbjct: 1 MAVPINQVMAFSAVARTGSFAEAALRLHLSQPALSIAIKNLEEALGGKLFARTTRSVTLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ RLL + +L+D GK+ +AA T + +L+P+ +A HR+YP Sbjct: 61 PEGKAFYPVARRLLSDWEQSLQDVRNHFSLRRGKLDIAAMPTYTINLLPKILASFHRQYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +I +HD + V+E +R+ + G+ DP DL + + + F + + L + Sbjct: 121 NINVTVHDVIAESVVEMVREHRCELGVTFDPDDSPDLTFQPLFIDRFIAIFPKQHPLLGK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W+ L + +G+R ID LA+ G++ E ++ MV G+G+S Sbjct: 181 GSLRWRDLLDYPHISLQKPAGTRARIDQTLAKKGLRITPAFESHQLVSIGRMVREGLGLS 240 Query: 241 ILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 ++P+ + + L + I PV+ QL ++ R+ ++LS AA+A+ ++R+ Sbjct: 241 VVPSTSRAQMKEMGLECRAIAFPVITHQLGVITRRQQTLSVAAQAMASLIRE 292 >UniRef50_A0L4T1 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=A0L4T1_MAGSM Length = 307 Score = 300 bits (769), Expect = 5e-80, Method: Composition-based stats. Identities = 80/303 (26%), Positives = 149/303 (49%), Gaps = 5/303 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M++S +L+VF VA+ SF+RA E + L+Q AV+ +++LE H RL DR + LT Sbjct: 1 MSFSDTRLRVFYAVAKHLSFTRAAEELYLTQPAVTFQIRQLEEHFDTRLFDRHHNRISLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG ++ ER+LD T + + G V+V AS TI +L+P+ +++ ++ Sbjct: 61 EAGLEVYSYAERILDLYRETEKAVSELTGVTRGVVKVGASTTIGEYLLPRILSDYRDQFN 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 D+Q L + V+ + +D G++ P ++ + L + ++ + L Sbjct: 121 DVQIRLSIDNTRTVVRKLEDATIDVGMIEGPVKNKNIARDGCLDDELVVILPPNHPLCDL 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGI---QANIVQEIGHPATLFPMVAAGI 237 D +P + L+ V ++ SG+R ++ L G+ Q +IV E+G + V GI Sbjct: 181 DEIPVKELKAYPFVSREEGSGTRQVVHDHLLHAGLPYDQLDIVLELGSTEAVKGSVEGGI 240 Query: 238 GISILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 GI I+ + +L L G + + + R + + +K + S A EA + +D Sbjct: 241 GIGIVSSASLIKELKLGILVAKRVQGMRITRTINFIHQKQKFRSKAVEAFINFAKDHCKH 300 Query: 296 LMA 298 +++ Sbjct: 301 MVS 303 >UniRef50_B1KU62 Transcriptional regulator, LysR family n=10 Tax=Clostridium RepID=B1KU62_CLOBM Length = 293 Score = 299 bits (768), Expect = 6e-80, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 140/286 (48%), Gaps = 2/286 (0%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 ++L++F VA++ + + E++ +SQ AVS ++ ELE+ GV+L DR R + LT+ G+ Sbjct: 4 RKLRIFYEVAEKLNMTEVAEKLYISQPAVSQTILELESELGVKLFDRINRRLYLTNEGEL 63 Query: 66 LALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFV 125 + R+L+ + +R + +GK+++ AS TI +++P I + ++Y I Sbjct: 64 FLNYVRRILNMYDDAIRSLKDINSLKTGKLKIGASTTIGIYILPDIIGKFTKQYKGIDTS 123 Query: 126 LHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPW 185 + + + + I +DF V P ++ E + + + + +D + Sbjct: 124 IAIENTKLISDMILDNSIDFAFVEGPVYNEEIIKENFCDDELVFITSPEHPWSNKDEISI 183 Query: 186 QALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPAL 245 + K+++++ SG+R + ++ + N + NI E+G+ + V AG+G+S + Sbjct: 184 TEVDKEKIIMREIGSGTREVFESYMTANNVNYNIAFELGNTEAIKKAVEAGLGVSCISKR 243 Query: 246 AL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 + + + K ++R+L+L+ K++ LST + Sbjct: 244 CIKNEINNNTLSWTKLKEFEIKRKLILIYHKDKFLSTLLKTFIKFA 289 >UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYF2_THERP Length = 299 Score = 299 bits (768), Expect = 6e-80, Method: Composition-based stats. Identities = 97/294 (32%), Positives = 149/294 (50%), Gaps = 2/294 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ SL+QL+VF +VA+ +SFSRA E + +SQ AVS +K LE GV L RT R V LT Sbjct: 1 MDVSLRQLQVFRSVARHRSFSRAAEDLVISQPAVSAQIKSLEQVLGVPLFQRTGRGVELT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+QL ERLL+ L+ L + G+VRVAAS T +++P+ + HR YP Sbjct: 61 EAGRQLLPYAERLLNLLDEALAAVHELRCAQRGQVRVAASTTAGIYVVPKALGAFHRAYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ L + V + + GD D I+ DL+ E L ++ LA Sbjct: 121 GVELSLDVLNRFAVHQRLLAGDADVAIMGLIEDPQDLEIEQFLPNELVVIASPRHHLARR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 +P + ++++ SG+R ++ A G+ + E+ + VAA +G++ Sbjct: 181 HQIPLDEIAREPFLVREIGSGTRADMERIFAEAGLSPRVAMELRSNGAIKQAVAADLGVA 240 Query: 241 ILPALA--LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 ++P A L L G +V+ V R LVRR R S AA+ALW+ + Sbjct: 241 VMPRDAIGLELETGRLIVLDVQGFPVRRWWSLVRRAGRQPSAAADALWNFLLQY 294 >UniRef50_C0ZCK2 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZCK2_BREBN Length = 295 Score = 298 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 78/295 (26%), Positives = 136/295 (46%), Gaps = 1/295 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+Q++ + VA+E+SFSRA R+ L+Q ++S + +LE GV L R + V LTDA Sbjct: 1 MELRQIRYVLAVAEERSFSRAANRLHLAQPSLSQQIAKLEKILGVSLFHRLPQHVELTDA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ+ + L+D R+ SGK+ V + A+++P+ + +++P + Sbjct: 61 GQRFIQVAQTLVDMSEGLEREMRAYAVGESGKLLVGSLPITGAYVLPRVLPTFTKQFPGV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L + + + + +G +D ++ P L+ ++E FL + LA Sbjct: 121 ELQLMEETSSHLEQLLVRGKIDVSLLTMPISDPSLEIIPAINEEIFLAVPANHPLAKRKE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V + +L G R + + G + IV E + T +VAAG+G+S Sbjct: 181 VDLAEVADQPFILLKEGQGFRTISLRLCEQAGFRPRIVFESSNIQTAQSLVAAGMGLSFA 240 Query: 243 PAL-ALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 P + L P RI R L++ RK++ LS AEA + +QG + Sbjct: 241 PKMITLAPGTIEPPTYVRIKTKPSRTLVVAYRKDKPLSRPAEAFVQCLIEQGGKI 295 >UniRef50_B5YJV7 Transcriptional regulator n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJV7_THEYD Length = 302 Score = 298 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 73/292 (25%), Positives = 143/292 (48%), Gaps = 5/292 (1%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 +LKVF TVA+ KSFS+ E I L+Q AVS ++ LE +L DR++ + LT AG+ Sbjct: 4 HKLKVFCTVAETKSFSKTSEIIHLTQPAVSLQIQALEELYETKLFDRSSGSITLTPAGEI 63 Query: 66 LALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFV 125 L +++L ++ ++ + G V++ A T+ +++P + +R+P I+ Sbjct: 64 LYKYAKQILTMYAEAAKEISKITGLIKGCVKIGAGTTVGNYILPAVAVDFKKRHPKIRVS 123 Query: 126 LHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPW 185 + + ++E + +DFGI+ + ++I+S+ ++C D L + V Sbjct: 124 VSIGNAKKILEMLNSSMIDFGIISEMPGKSKFIVDSIISDELCVICSADHPLNNQKSVSL 183 Query: 186 QALQGAKLVLQDYASGSRPLIDAALARNGIQ---ANIVQEIGHPATLFPMVAAGIGISIL 242 + V+++ S +R +I+ LA +G+ +I +G ++ V GIG+SI+ Sbjct: 184 YDVVKEPFVIREEGSSTRVIIEKFLAEHGLSVSDLHISLILGSTGSIKEAVERGIGLSIV 243 Query: 243 PALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 A+ + G+ ++K + R ++ KN LS A E +++ Sbjct: 244 SKWAIRKEVSCGNLRILKLKEGKITRDFYIILPKNTILSPAVEEFITYLKNY 295 >UniRef50_Q31FC6 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=Q31FC6_THICR Length = 318 Score = 296 bits (759), Expect = 7e-79, Method: Composition-based stats. Identities = 72/294 (24%), Positives = 140/294 (47%), Gaps = 4/294 (1%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 ++L+VF TVA+ SF++A E + ++Q AV+ VK+LE RL DRT ++ LTDAG+ Sbjct: 4 RRLQVFYTVAKVLSFTKAAETLHMTQPAVTFQVKQLEEFFNTRLFDRTHNKITLTDAGKI 63 Query: 66 LALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFV 125 + E++LD + + +++G + + AS TI+ +++P + +++ D+ Sbjct: 64 VYDYAEKILDHYEKMNSEVRELTGEVTGSLLIGASTTIAEYMLPSLLGAFKKQFEDVNIR 123 Query: 126 LHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPW 185 L ++ + +D G+V P +L+ E + L+ L+ D + Sbjct: 124 LQVGNTDAIVAMVENNMIDLGVVEAPVYNKNLEVEVCRLDEMVLIVPHGHPLSNRDKISI 183 Query: 186 QALQGAKLVLQDYASGSRPLIDAALARNGIQ---ANIVQEIGHPATLFPMVAAGIGISIL 242 + ++ + + ++ SGSR +ID + G+ N+V E+G P + V + +G++I+ Sbjct: 184 EDMRKYRYISREEGSGSRSVIDNYIREQGLSYSDLNVVMELGSPEAVKMAVESDVGLAIV 243 Query: 243 PALALPLPEGSP-LVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 + L + P + R VR+K++ A L D D Sbjct: 244 SRTTISKELKLGTLKALPLDPPLNRPFSHVRQKHKFRHRAVGELLDFAVDYCKE 297 >UniRef50_B1Z4Z1 Transcriptional regulator, LysR family n=5 Tax=Proteobacteria RepID=B1Z4Z1_BURA4 Length = 313 Score = 296 bits (758), Expect = 9e-79, Method: Composition-based stats. Identities = 98/292 (33%), Positives = 155/292 (53%), Gaps = 1/292 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +N+ L L+ F V + SF +A + I +SQ A+S + +LE GVRL +RTTR V LT Sbjct: 3 INFDLTDLQAFRAVVELGSFRKAADAISISQPALSRRIDKLEEALGVRLFERTTRSVTLT 62 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ A E+LLD+L+ L + G V +A +++ + +P IA HRR+P Sbjct: 63 TVGRVFAPSAEQLLDDLDVALLGIRDVSSSRLGHVTIACVPSVAYYFLPNVIASYHRRFP 122 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ L D V+ ++ G+ DFG+ ++ + +L E F C RD LA + Sbjct: 123 RIRVKLLDAGANEVLSAVISGEADFGVSFMGSQEPEIDFKLLLQERFVAACRRDHPLARK 182 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V W L + V D SG+R L+D AL +A V E H TL ++ AG+G++ Sbjct: 183 KRVTWNELYEYEYVSVDKTSGNRLLLDQALTTVAPRAPSVCETRHVTTLLGLIEAGLGVA 242 Query: 241 ILPALALPLPEGSPLV-VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 +P++A+P + L V + PVV+R++ +V+R+ R L+ AAE + D Sbjct: 243 AVPSMAMPGHDHPLLTSVPLVEPVVKRRVGIVKRRGRPLTPAAEEFHRAIVD 294 >UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Bacillales RepID=C6IV95_9BACL Length = 305 Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 76/292 (26%), Positives = 136/292 (46%), Gaps = 2/292 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ FV VA+++ ++A E + ++QSAVS + +LE GV L + R + LT Sbjct: 1 MELRQLQYFVKVARKEHVTQAAEELHVAQSAVSRQIHQLEQELGVNLFMQKGRNLHLTAV 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ R+E +L +L+ + + G++R+ ++ H+IP +AE + YP++ Sbjct: 61 GQLFCSRVEMILKDLDRAVSEVHEFLDPEQGEIRLGFPNSLGIHMIPSVVAEFRKLYPNV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVID-PGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 +F ++ + G+VD + P + +L+E + LA E Sbjct: 121 KFRFRQGTYPTLIRDVVSGEVDLAFISPFPENHDQVTGNVVLTEDLVAILPPGHPLAGEQ 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + L+ K +L RP++ A G I E T+ +VAAG+G+S+ Sbjct: 181 SIKLSQLKDEKFILFSKGYSLRPIVWHACLEAGFTPKIAFEGEETDTIRGLVAAGMGVSL 240 Query: 242 LPALAL-PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 LP +AL P+ V+ P V R + L+ R + L A++ + + Sbjct: 241 LPEMALFQSFTLQPIRVRISEPKVTRTIGLIHRVDEKLPLVAQSFRMFLLEY 292 >UniRef50_C6CYG5 Transcriptional regulator, LysR family n=2 Tax=Paenibacillus RepID=C6CYG5_PAESJ Length = 297 Score = 295 bits (756), Expect = 1e-78, Method: Composition-based stats. Identities = 76/289 (26%), Positives = 131/289 (45%), Gaps = 2/289 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ + +A EK+FSRA E++ ++Q ++S + +LE GV L RTT V LT A Sbjct: 1 MELRQLQYVIQIAIEKNFSRAAEKLHIAQPSLSQQLSKLEQELGVLLFRRTTNSVELTQA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ + + +LD + ++ M Q G++ V +H++P + YP I Sbjct: 61 GQVFVDKSQSILDAIEQLKQEMDDMAQMKRGRLVVGTLPITGSHILPLVLPVFGELYPQI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE-D 181 + +L + + + G D ++ P L+ E ++ E L LA D Sbjct: 121 EVILVEDTTVKLEQLTANGGTDISLLTLPLVDQTLEWEPLMEEEICLAVPPSHRLAGRTD 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + + L+ V G R ++ + G NIV E + T+ ++A G+GI+ Sbjct: 181 EISIEELREEHFVGLKKGQGFRQILVHLCQQAGFTPNIVFESSNIETVQSLIAGGMGITF 240 Query: 242 LPALALPLPEGSPL-VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 +P + G + V + R L++ RK R LS AA A + + Sbjct: 241 VPKMLTRAAGGDFVPVYLSLKDRPSRTLIIASRKGRYLSKAAVAFIETM 289 >UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=Rhodobacter sphaeroides KD131 RepID=B9KVK0_RHOSK Length = 321 Score = 294 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 98/293 (33%), Positives = 157/293 (53%), Gaps = 1/293 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN L+ L+ FV A+ +SF A + I LSQ A++ +++LE GV LL+RTTR V LT Sbjct: 14 MNIDLEDLRAFVATAEMQSFRAAADSIHLSQPALTRRIQKLEATLGVSLLERTTRRVSLT 73 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ R R+LD+L ++L + ++ SG V +A T + + +P I+ +P Sbjct: 74 AVGRDFLPRARRILDDLETSLLSVREIAERRSGLVSIACIPTAAYYFLPDVISAFTEEFP 133 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+F + D V++SI + DFGI + D+ + ++ EPF L C RD LA + Sbjct: 134 AIRFRIFDAGANEVLQSILNREADFGITLLGADDPDVTFDPLIEEPFLLACRRDHPLARQ 193 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + V W L + V SG+R ++D ALAR ++ E+ H +T +V AG+G++ Sbjct: 194 ESVTWADLAAHRFVTVGRTSGNRLIMDLALARANVRPRSFFEVQHLSTSLGLVEAGLGVA 253 Query: 241 ILPALALPL-PEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 LP +ALP P S + + I P V R + +VR + AAE + ++ + Sbjct: 254 ALPRMALPAGPHPSIVTLPLIEPRVTRTVGVVRVPGARRAPAAEQFYQMLLSR 306 >UniRef50_Q0K6D4 Transcriptional regulator, LysR-family n=2 Tax=Cupriavidus RepID=Q0K6D4_RALEH Length = 301 Score = 294 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 95/291 (32%), Positives = 162/291 (55%), Gaps = 1/291 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN SL+QL+ F+ VAQE+ F+RA E++ LSQS+VS + ELE + G++L DR TR++ +T Sbjct: 1 MNVSLRQLRAFIAVAQERHFTRAAEKLDLSQSSVSALIHELEGNLGLKLFDRHTRQLHIT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG +L +++ + +++S + ++ + G+V ++AS +A ++P+ I E +P Sbjct: 61 QAGAELLPLVKKAVADIDSVIENSSELRTLGRGRVSISASSIQAALMLPRVIREFCVSHP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ LHD + V + + G+VDFGI P DL ++S+PF ++ L Sbjct: 121 GVKVELHDVSEHEVTKMVSSGEVDFGIGTIPEGQPDLSAHRLMSDPFVIVMPAHHPLRRR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W+ + G ++ + R +D ALA GI V E+ P T+ MV AG+GI+ Sbjct: 181 KTLRWEDVAGLPVIGPHKGNPIRDCLDTALAARGISLQRVHEVFLPLTMVGMVDAGLGIA 240 Query: 241 ILPALALPLPEGSPLV-VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 ++ A L L V PV+ R++ L+ +RSLS A+A D++ Sbjct: 241 VMSAAVTRLTSALGLATVMPTDPVIHREISLLVHADRSLSPPAQAFRDLLM 291 >UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=Bacillales RepID=C6D4H5_PAESJ Length = 303 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 5/296 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M + QL +F TVA+ SFS A + + ++Q AV+ V+ LE++ G +LL R+T+ + LT Sbjct: 1 MALNFHQLHIFYTVAERGSFSAAAQSLHMTQPAVTMQVQSLEDYFGTKLLQRSTKRIDLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+ L R ++ + T + +QL G++++ AS TI +++P+ + + +P Sbjct: 61 EAGKALMPYARRSIELIRDTDQAMSAFTKQLKGRLQLGASLTIGEYILPRLLGPFGQTFP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +I + ++E I + FG++ P D+Q EA++S+ L+ +D L+ Sbjct: 121 EISISMKVMNTAQIIEEIINHQLTFGLIEAPVNHPDMQMEAVMSDELKLIVPKDHPLSKR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQA---NIVQEIGHPATLFPMVAAGI 237 V + V+++ SG+R +++ L R I IV E+G + V AG+ Sbjct: 181 QKVLLDEVADYPFVVREQGSGTRLVMEEQLKRKKIDPADLKIVMELGSTGAVKSAVEAGL 240 Query: 238 GISILPALALPLPEGSPL--VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 G+S + ++ L V+ +RQ + K+ L +A +R+ Sbjct: 241 GVSFVSESSVKHEVALGLLHVIPIEDTRFKRQFYSIYLKSTLLPISAVTFLTFLRE 296 >UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CY97_PAESJ Length = 305 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 77/303 (25%), Positives = 140/303 (46%), Gaps = 3/303 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL FV VA+++ ++A E + ++QSAVS + +LE GV+L + R + LT Sbjct: 1 MELRQLYYFVKVAKKEHVTQAAEELHVAQSAVSRQIHQLEEELGVKLFLQKGRNLQLTPV 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ R E +LD+L + + G++R+ ++ ++PQ +A + +P++ Sbjct: 61 GQLFLKRAEVILDDLERAVVEIHEFMDPEKGEIRLGFPHSLGVSVVPQVVAAFRKLHPNV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVID-PGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 +F ++ + +G++D + P + E +L+E F + LA E Sbjct: 121 KFRFRQGMYPSLIRDMVKGEIDLAFISPFPDEHEQVCGEVLLTEELFAILPPSHPLAGEQ 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + L+ V+ RP++ A G I E T+ +VAAG+G+S+ Sbjct: 181 EIDLIQLKEDTFVMFSEGYSLRPIVWEACQEAGFTPKIGFEGEETETIRGLVAAGMGVSL 240 Query: 242 LPALALPLPE-GSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 LP +AL V+ TP V R + ++ R N + A+ + N L G+ Sbjct: 241 LPEMALYHAGVLQSAKVRVRTPNVTRNIGIIHRSNEKMPLVAKVFHGFLLRYFNEL-EGK 299 Query: 301 EGD 303 +G+ Sbjct: 300 QGN 302 >UniRef50_Q7WCW0 Probable LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7WCW0_BORBR Length = 305 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 95/296 (32%), Positives = 146/296 (49%), Gaps = 3/296 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN + +QL F+ VA +SFS+A + + ++Q A++ +++LE GV L RT R LT Sbjct: 1 MNVTFRQLTAFIEVASSRSFSQAAQALHVTQPALTAMIQKLEAQLGVVLFTRTRRGAELT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G++L L+R+L L + D G V +A ++S IP IA + YP Sbjct: 61 TTGRELLPELQRILANLEVVIEDVRGAASPRGGTVTLACIPSLSNTWIPSLIARVEQAYP 120 Query: 121 DIQFVLHDRPQQ--WVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALA 178 I+ +L D + + E +R GD+D+G+ L+ + + + + +D LA Sbjct: 121 RIKVILKDAMTENRSIHEMLRTGDIDYGVGSPSVEQDGLEFDLLAHDELVAVVPQDHPLA 180 Query: 179 VEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 V W L + L+ Y S R L+D A A NGI +E+ T MV AG+G Sbjct: 181 RRTLVRWSELAESPLIGMSYQSHVRMLVDEAFAANGISKRPKREVSLITTAIGMVRAGLG 240 Query: 239 ISILPALALPLPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVVRDQG 293 +S+LP A+ + + L V R+ P V R L + RSLS AA L V+D G Sbjct: 241 VSVLPTTAIEVCNVAGLKVLRLHAPRVRRPLGFLHLPTRSLSPAARLLLRFVKDAG 296 >UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=Q122V6_POLSJ Length = 307 Score = 293 bits (752), Expect = 4e-78, Method: Composition-based stats. Identities = 93/290 (32%), Positives = 149/290 (51%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +N+ L+QL+ FV VA+ SF A E I LS A+S + +LE G RL +RTTREV LT Sbjct: 4 INFDLQQLQGFVAVAERGSFRAAAEHINLSSPALSRRIDKLETILGARLFNRTTREVELT 63 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ R LD+L S + + G+V VA + + + +P ++ + YP Sbjct: 64 PLGRVFLERARTALDDLESAMLGIADIATHRGGRVTVACVPSAALYFLPTVVSNFSQHYP 123 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ + D V++S+ G+ DFGI V ++ E+I ++PF L R+ LA Sbjct: 124 GIRVRVVDETMNQVLQSVLSGESDFGIGFMNTLVPEIAFESIHNDPFVLAMRREHPLARH 183 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V W ++ L+ +SG+R L+D +L + G+ + E+ H ATL MV AG+G++ Sbjct: 184 KSVNWADVEKESLIAVARSSGNRQLLDDSLTKAGLNPSFAFEVSHVATLLGMVEAGLGLA 243 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 +P +AL + + + P R++ L+ R L AAE +R Sbjct: 244 AVPRMALASTHATLVGLPLRQPQTVRRVGLLTRHGVKLRPAAEMFHQHLR 293 >UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=Proteobacteria RepID=A1WVW1_HALHL Length = 318 Score = 293 bits (751), Expect = 5e-78, Method: Composition-based stats. Identities = 84/296 (28%), Positives = 146/296 (49%), Gaps = 3/296 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+VF +VA+ SF+RA E + L+Q AVS +K+LE G+ L ++ + + LT Sbjct: 1 MNITLRQLQVFESVARHLSFTRAAEELYLTQPAVSMQIKQLEQQVGLPLFEQIGKRIYLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+++ +R+ EL + SG++R+ + + + +A RR P Sbjct: 61 EAGEEVRRYAQRISAELRELADGLEALRGLNSGRLRL-TVASTANYFATDLLAAFTRRQP 119 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + F L ++ V+ I+ ++D ++ P D+ EA + P ++ D LA Sbjct: 120 GVTFQLEVTNREGVIRRIQDNEMDLAVMGRPPEGLDVAAEAFMPNPLVIIAAPDHPLADG 179 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 +P + LQ VL++ SG+R + L G+ E+ + V AG+G+ Sbjct: 180 SPIPLERLQDELFVLREQGSGTRNAVQRVLEERGMNLRGGLEMSSNEAIKQSVQAGLGLG 239 Query: 241 ILP--ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 ++ +AL L G V+ +ERQ LV R + LS AAEA + D+ + Sbjct: 240 VVSIHTVALELELGRLRVLNVEGFPLERQWYLVHRSGKRLSPAAEAFRQFILDEAH 295 >UniRef50_UPI00016C47B2 transcriptional regulator, LysR family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C47B2 Length = 291 Score = 292 bits (750), Expect = 7e-78, Method: Composition-based stats. Identities = 80/292 (27%), Positives = 131/292 (44%), Gaps = 6/292 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENH---TGVRLLDRTTREVVL 59 L QL+ FV VA+ SF+RA ER ++Q +S + LE+ G RL DR R+VVL Sbjct: 1 MELHQLRYFVAVAETGSFTRAAEREDVTQPTLSEQIMRLESKPHGVGRRLFDRLGRKVVL 60 Query: 60 TDAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRY 119 TDAG++L + +L + R + G +RV A TI+ L+P + + + Sbjct: 61 TDAGRELLGHAQGILAAVKEAERAVRDSAEG--GSLRVGAIPTIAPFLLPGTVTRFRKDH 118 Query: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 P++Q L + + ++ + G++D ++ P L E + +EP + LA Sbjct: 119 PNVQLQLKEDLTERLLADLLAGELDVALMAMPVRDDRLHVEKLFAEPLVMALPAKHELAS 178 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 + V + +L D + + R G++ +V TL MVAAG G+ Sbjct: 179 KTEVKLADVLEEPFILLDDMHCFGDQVLSLCHRGGLEPRVVCRGEQIVTLLAMVAAGQGV 238 Query: 240 SILPALALPLPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 SI+P +A + + P R L V K R + AL D+ + Sbjct: 239 SIVPEMAATADTSKQCAYRPLGKPTPVRTLCAVWHKQRFRPPSLRALVDMAK 290 >UniRef50_Q46PT5 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46PT5_RALEJ Length = 300 Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 93/298 (31%), Positives = 157/298 (52%), Gaps = 2/298 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+ FV VA+ F+ A ++ L+QSA S ++ELE+ G++L+DR+TR LT Sbjct: 1 MNVTLRQLRAFVEVARSGGFTAAAPKLHLTQSATSLQIRELESQLGLQLIDRSTRRFALT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 DAG + + R++ ++ ++ DT + + G++ VA + +++ L+P+ IA YP Sbjct: 61 DAGSEFLISAMRIVGDVEQSVADTRELVHKRRGRITVATTPLLASTLLPESIAHFLDAYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I + D P + + + GDVDFG + P +L P ++ LA Sbjct: 121 AITVRIADLPAEQIGRRVLSGDVDFGFGVFPEEDPQFDRIPLLRHPLGVMVPSSWPLATR 180 Query: 181 DY-VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 + W L+G L+ +A+G R LID L + G+Q N E+ + T + AG+G+ Sbjct: 181 KRDLVWSDLEGQPLIAMSHATGMRTLIDQQLHQAGVQVNPRFEVAYLGTAVGLAEAGLGV 240 Query: 240 SILPALALPLPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 +++PA L + + + PVV RQ+ L+ R RSLS +A A D + + L Sbjct: 241 TVVPAYVGKLMGSDRVRFRPLHKPVVHRQIELIVRAGRSLSPSAAAFRDCLAARCKML 298 >UniRef50_B0N992 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B0N992_EUBSP Length = 335 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 139/299 (46%), Gaps = 5/299 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L+ L +FV+V + S ++A + + ++Q +VS +KELE + G++L DR R + T+A Sbjct: 1 MTLRHLNIFVSVYEYNSITKAADALHIAQPSVSLVIKELEEYYGIQLFDRIGRGITPTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G++L ++ N + G +R+ AS TI H++P I E + +P + Sbjct: 61 GKELYSYAIHIVSLFNEMAQRIKNWDN--VGTLRIGASITIGTHILPGLIKEYQKDFPYL 118 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + + I +D G++ + ++ + + + + + L+ + Y Sbjct: 119 RIKVTVNKSATIEQHILDNKIDIGLIENQPDHPEILSQPFMKDNLCAIVPNEDPLSSKAY 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + L ++++ S R ++DA + I N + E + V+ +G+++L Sbjct: 179 ITLEELASRPFLMREKGSAGREILDACFSLKNIHVNPLWESSSTQAIVKGVSMNLGVAVL 238 Query: 243 PALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 P L + + E + + TP + R L ++ K++ L+ + + + G + + Sbjct: 239 PYLLIKRDIEEHNVNYLPFKTP-LTRNLNIIYHKSKYLTRNMLSFIGLCKKVGRSHLVC 296 >UniRef50_P37499 Uncharacterized HTH-type transcriptional regulator yybE n=4 Tax=Bacillales RepID=YYBE_BACSU Length = 292 Score = 290 bits (744), Expect = 3e-77, Method: Composition-based stats. Identities = 79/286 (27%), Positives = 129/286 (45%), Gaps = 1/286 (0%) Query: 7 QLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQL 66 QL+ F T+A+ + ++A + + ++Q A+S S+ LENH GV L DR R + L G Sbjct: 5 QLEYFQTLARMQHVTKAAKSLSITQPALSRSIARLENHLGVPLFDRQGRSISLNQYGHIF 64 Query: 67 ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVL 126 R++ ++ E + + + G V + T+ L+P I + YP+I F L Sbjct: 65 LRRVQAMMKEYTEGKEEIQALLKPDQGVVSLGFLHTLGTTLVPDLIGSFQQEYPNISFQL 124 Query: 127 HDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQ 186 W++E ++ GD+D ++ P +Q + SE F+ D LA + + Sbjct: 125 KQNHSYWLLERLKSGDLDLCLLASIKPENPIQWIKLWSEELFVFVPNDHPLASRESITLN 184 Query: 187 ALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALA 246 + G + +L R +D + IQ NI+ E T VAAG+GISILP L Sbjct: 185 EIAGERFILLKKGYALRMTVDELFEKANIQPNIMFEGEEATTAAGFVAAGLGISILPDL- 243 Query: 247 LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 L + ++ P +R + + K R LS AE V Sbjct: 244 KGLDQSKITKIRVSWPECQRVIGIAWIKGRFLSPVAETFKQYVISH 289 >UniRef50_A7ZAT2 Putative HTH-type transcriptional regulator n=2 Tax=Bacteria RepID=A7ZAT2_BACA2 Length = 302 Score = 290 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 129/288 (44%), Gaps = 1/288 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++Q+ F+ VA+ SF++A E + LSQ A+S VK LE V L+DR+ R++ LTDA Sbjct: 1 MDIRQITYFLEVAKSNSFTKASENLHLSQPALSKMVKSLEEELKVELIDRSARQIALTDA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + + + ++ ++ + + GKV++ I P+ I + YPD+ Sbjct: 61 GEIVFEQGQMIMKSIDDLSTNLYDLLHLKKGKVKIGIPPLIGVLFFPKIIRGFKQLYPDV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + V + + G +D G+VI+P +L+E L H L ++ Sbjct: 121 NIKLIEHGGNKVKQEVEDGVLDLGVVIEPVDEEQFDIIPLLNEELMLFVHSAHPLVHKEI 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V Q L+ +L I R G + NIV E + M+ +GISI Sbjct: 181 VEMQDLKNEPFILFSEDFSLHDRIIQECIRAGFRPNIVYESSQWDFISEMIGEELGISIF 240 Query: 243 PALALPLPEGSPL-VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 P + + S + + + P + ++ ++ +K + +S A + Sbjct: 241 PQSIVKKTDQSLVKAISIVNPSIPWKVAIILKKGKYVSHAVREFIRYI 288 >UniRef50_Q3AG03 Transcriptional regulator, LysR family n=2 Tax=Clostridia RepID=Q3AG03_CARHZ Length = 302 Score = 290 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 136/293 (46%), Gaps = 2/293 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +QL+ F V++ SF+RA E++ ++Q +++ ++ LE V+L DR+ R+VVLTD Sbjct: 1 MEFRQLEYFYAVSKLNSFTRAAEQLHVAQPSITIAINNLEQELKVQLFDRSKRKVVLTDE 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ +E++L ++ + + G +++ I A+L P+ YP + Sbjct: 61 GKLFLQHVEKILKDVKKAQSELEDLKNYKKGVIKLGIPPMIGAYLFPKIFKGFKNAYPHL 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + ++ + G++D G++I P +L I + L + + E Sbjct: 121 ELHVREEGSWAMVSLLENGELDLGLIILPEQSENLCMLPITKDQIVLCVSENHRFSQEKR 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + L+ + +L S +R I A G NI+ T+ +V+ G+GI+ L Sbjct: 181 ISLRQLEDEQFILLKEDSYTRHKIIALCNYYGFSPNILLSSCQIETIKELVSNGLGITFL 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 + + +V ++ + + L +K+R LS AA+A V++ + Sbjct: 241 --MNGITKKWDKIVSIQLEEPMNITIGLAWQKDRCLSRAAQAFIGFVQNYTKS 291 >UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A1WHL2_VEREI Length = 305 Score = 290 bits (743), Expect = 5e-77, Method: Composition-based stats. Identities = 91/305 (29%), Positives = 148/305 (48%), Gaps = 1/305 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN+ L ++ FV VA SF A + + +SQ A+S V++LE G RL +RTTR+V L+ Sbjct: 1 MNFDLSDMRAFVAVADLGSFRAAAQTLHISQPALSRRVEKLEQAMGFRLFERTTRKVELS 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ + +L EL + L M +L G+V VA + HL+ + R++P Sbjct: 61 AIGRSFVPKARHVLSELENALLGMTDMSDRLRGQVTVACVPSSVPHLLAGAVEAFQRKFP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ L D ++ ++ + + DFG+ DL+ + ++ EPF L C LA + Sbjct: 121 RIRVRLIDETATEILLAVVRSEADFGVSYWGAQEPDLEFQGLVQEPFVLACLPGHPLARK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V W L V +G+R LID AL+ E H L ++ AG+G+ Sbjct: 181 RRVKWAELAQHDCVTLPPGTGNRMLIDQALSTVAYPPRWTCEARHVPALLSLIEAGVGVG 240 Query: 241 ILPALALPLPEGSPLV-VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 +P A+ +G+ L V+ + P V R + +++R+ R L AA+A D++ A A Sbjct: 241 AVPRFAIRGGQGATLASVRLVEPEVTRTIGVIKRRARPLMPAAQAFHDLLVAAHRASSAQ 300 Query: 300 REGDP 304 P Sbjct: 301 ARPLP 305 >UniRef50_Q0TQC8 Transcriptional regulator, LysR family n=10 Tax=Clostridium RepID=Q0TQC8_CLOP1 Length = 294 Score = 289 bits (741), Expect = 7e-77, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 138/291 (47%), Gaps = 2/291 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + ++LK+F A+ + ++ + + +SQ ++S ++ ELE+ V+L DR + + LT Sbjct: 1 MNFRKLKIFFETAKCLNMTKVAKSMYISQPSISQAIAELESDLDVKLFDRIGKRLYLTHE 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ R+L+ + GK+ + AS TI +++P+ I E + + +I Sbjct: 61 GEVYFEYSRRILNLYEEANSTIRSSKEGQKGKIVIGASTTIGIYILPELIKEFNELHKNI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L Q + E I + VD +V +L+ I + + + ++ + +D Sbjct: 121 EISLIIENTQLIEELIMENKVDIALVEGYVKSDELEVFDIGKDELIFIANPNNPIFSKDK 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + L+ K ++++ SG+R +I+ L G N+ E+G+ + +V G+GI+ + Sbjct: 181 ITLKDLEDEKFIMREPGSGTREIIENYLINKGCNYNVYMELGNTEAIVRVVETGLGIACV 240 Query: 243 PALALPLPEGSPLV--VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 A+ L+ +K V R L L+ K++ +S E D +++ Sbjct: 241 SCKAIDERINEGLIKEIKIDDIKVSRDLYLIYHKDKFISKNLEIFIDKIKN 291 >UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=Geobacter RepID=B5EGJ2_GEOBB Length = 300 Score = 289 bits (741), Expect = 7e-77, Method: Composition-based stats. Identities = 74/291 (25%), Positives = 124/291 (42%), Gaps = 2/291 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++QL+ F+ VA+ K+F++A E + ++Q AVS +VK+LE + L +R ++V LT Sbjct: 1 MDVRQLRYFIEVAKVKNFTKAAEALHIAQPAVSMAVKKLEQELELSLFNRQDKKVSLTAE 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ +R+LD+L + + + G+VR+ ISA+ P I + + YP + Sbjct: 61 GEIFLPHAKRILDDLRAAELEMAELKGLSKGEVRLGIPPMISAYFFPDIIRDFKKSYPQL 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + I QG++D G+V L+ L E + D A Sbjct: 121 HLSVLGEGAWRIQKMIGQGELDMGVVAGGNFPETLEVRRFLREEIVICVPPDHPFAQRKS 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V LV R L G NIV E + + +V G GISI Sbjct: 181 VSLVEFIREPLVFYKEGYYIREFFLEVLKGAGSAPNIVFETNLFSLVKSLVRNGTGISIF 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQG 293 + + + LV P + L++ +K+ LS A A D + Sbjct: 241 LRMVV--AADTDLVAVPFDPPLHLDLLIAWKKDTYLSLANRAFVDFLLQHA 289 >UniRef50_Q1IRZ3 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRZ3_ACIBL Length = 296 Score = 288 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 74/292 (25%), Positives = 130/292 (44%), Gaps = 1/292 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + QL+ F VA+ +F+RA E ++Q ++S + +LE G RL DR R LT Sbjct: 1 MEVHQLRYFCAVARHGTFTRASEVEHVAQPSLSQQILKLEAELGARLFDRLPRSAKLTVF 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ ER+L +L+ + M G+V V TI+A+L+P+ + R+PD+ Sbjct: 61 GKAFLPNAERILRQLDEAKTELLEMTSNEKGEVTVGIIPTIAAYLLPKLLNGLSVRHPDV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + +++ + G +D I P P +L E + E F+ + A Sbjct: 121 TVKISEDITPVLLQRLHDGSIDMAIAALPIPGTELASEELFEEKFYAVLPEKHRRASRAS 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L +L R + AA + + ++V E G AT+ MV+AG+G+S + Sbjct: 181 ISLADLNREPFLLLKEGHCFRDSVIAACNQAAMSPSVVFESGQFATILAMVSAGMGVSAV 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 PA+A+ P + R++ +V ++ A L +RD Sbjct: 241 PAMAVQ-PHPGCKFIPISGKHSSRKVGIVTSRHHFQGRAQRLLLKQMRDACG 291 >UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHB2_MOOTA Length = 297 Score = 287 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 133/278 (47%), Gaps = 5/278 (1%) Query: 7 QLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQL 66 QL F VA++KSFSRA + L+Q A+S ++ LE + G RLLDR R+V LT+AG+ L Sbjct: 5 QLLTFKAVAEQKSFSRAARVLHLTQPAISLHIQSLEEYFGTRLLDRNNRQVTLTEAGRVL 64 Query: 67 ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVL 126 L + + + ++ G + V A+ TI + +P E R+YPD++ L Sbjct: 65 YNYALELSRLYDEVKKALADISGKVKGNLVVGATLTIGEYFLPSIAGEFKRQYPDVEITL 124 Query: 127 HDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQ 186 Q ++ G++D ++ +L E + + L+ H + A + + Sbjct: 125 RIANTQEIICRTLDGELDLALIEGQAKHPNLIQEDLFQDELVLIIHPEHRWAGRREITPE 184 Query: 187 ALQGAKLVLQDYASGSRPLIDAALARNGIQ---ANIVQEIGHPATLFPMVAAGIGISILP 243 L+ L+L++ SG+R + +A L + G++ +V E+G + V AG+G++I+ Sbjct: 185 ELREEPLILREEGSGTRQITEAGLRKAGLELSTLKVVMELGSTQAIKEAVEAGLGVAIIS 244 Query: 244 ALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLS 279 LA+ + V+ R + +++ S Sbjct: 245 RLAIKKEIRYNLLREVRLQGIDFRRTFHIAYNRHKFRS 282 >UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y467_9FIRM Length = 309 Score = 287 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 65/294 (22%), Positives = 141/294 (47%), Gaps = 4/294 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L+ L++FV V + S ++A E + LSQ AVS ++++LE++ G+ L DR ++++ LT++ Sbjct: 1 MTLRHLRIFVEVCRTGSITKAAESLHLSQPAVSLAIRQLEDYYGILLFDRISKKLYLTES 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G ++ +++ + +G +R+ +S + ++PQ + + R+P I Sbjct: 61 GNKMLSYASHIIESFDDMETQLKNWDS--AGTLRIGSSISTGTQMLPQLVRRFNLRFPQI 118 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + + + + +D +V D+ C ++ ++ L Sbjct: 119 RTQVLIDNSRIIEDKVLTNQLDLALVESLSYSPDIVCVPFYTDRLIVITAPKHPLTQNPE 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 +AL ++L++ SG+R ++DA L +Q + E ++ V IGISIL Sbjct: 179 CTVKALADYPVLLREPGSGTREVVDALLVTAEVQITPLWESTSTRSIINAVKENIGISIL 238 Query: 243 PALALPLPEGSPLV--VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 P + S V + +P+ R ++ +N+ L+ +A+A +V ++ N Sbjct: 239 PYELVKNEIQSGAVAGLPLASPLPNRTCSIIHHRNKYLTPSAQAFIEVCQEYSN 292 >UniRef50_B8D275 Transcriptional regulator, LysR family n=11 Tax=Clostridia RepID=B8D275_HALOH Length = 296 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 69/289 (23%), Positives = 142/289 (49%), Gaps = 5/289 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L+QLK+FV V + K+ S+A +++ +SQ A+S ++ ELE ++L DR + + LT A Sbjct: 1 MNLRQLKIFVMVCKTKNMSKAAKKLYMSQPAISQTISELEEDLNIKLFDRIKKRLKLTYA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L +R+L+ ++ T + GK+R+ AS TI +L+PQ I +Y I Sbjct: 61 GKILLRNSKRILNLVDETENIIKDIVNMNQGKLRIGASMTIGTYLLPQIIEGFLNKYNKI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + I +D +V P D+ E + +L+C + + + Sbjct: 121 HLPFTIDNTKVIEDMILDNKLDLALVEGPIYCKDILVEHFFDDQLYLMCSSKHSWSHKRK 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + L+G ++++ SG+R I+ + ++ I+ ++ + + + + +G+SIL Sbjct: 181 INSEELKGEDFIIREKGSGTRETIENIMRKHSIKYHVTHVFNNIEAIKRAIISNLGVSIL 240 Query: 243 PALALPLPEGSPLVVKRITPVVE--RQLMLVRRKNRSLSTAAEALWDVV 289 P + + L+VK +E R+ ++ K++ S + + V Sbjct: 241 PEICVKEELKKGLLVKVDIQGIEFKRKFSIIYHKDKYRS---QLFNNFV 286 >UniRef50_C8VWS6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWS6_DESAS Length = 300 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 73/296 (24%), Positives = 143/296 (48%), Gaps = 7/296 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN++ L+ FVTV + S S+A + + ++Q AVS + LE+H G++LL+R R++V T Sbjct: 1 MNFNF--LQTFVTVIEFNSISKAAKALNITQPAVSKQIASLEDHFGIKLLERLGRKMVPT 58 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG +L + +L+ L ++ M ++ G + + AS +++P+ I ++YP Sbjct: 59 EAGNRLNRHAKIILNSLQQAEKEINEMISEVRGNLVIGASTIPGQYILPKIIGLFKKQYP 118 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ VL V+E + + ++ G + + + + L+ + A Sbjct: 119 QVKTVLEISDSGKVIEKLLEHEIHLGAIGTKVLHDKIASIKLSDDELVLITPLEHPFATR 178 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQAN---IVQEIGHPATLFPMVAAGI 237 V L G ++V ++ SG+R ++ L G+ N I E G ++ V AG+ Sbjct: 179 KTVKAVELAGEQMVWRESDSGTRHAVEEKLTAKGLNVNNLIITAEFGSTESIIGAVEAGM 238 Query: 238 GISILPALALPLPE--GSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 GIS + A+P E + V++ V++R L ++ K + + AE + + Sbjct: 239 GISFVSHWAVPENEYRRNIAVLRLEDIVLDRNLYIIYPKRKYFNRTAETFINFLHQ 294 >UniRef50_Q65GU9 Transcriptional regulator YbbE n=2 Tax=Bacillus subtilis group RepID=Q65GU9_BACLD Length = 299 Score = 286 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 77/291 (26%), Positives = 139/291 (47%), Gaps = 3/291 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L Q+ F+ V++ K F++A +SQ A+S S+K+LE GV L R T+ + LT Sbjct: 1 MELYQIDHFIAVSRHKHFTKAALEQRISQPALSRSIKKLEEELGVPLFIRKTKSIRLTKY 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+Q ++ ++ L+ ++ +G++ V+ T+ + L+PQ IAE ++YP++ Sbjct: 61 GEQFLIKAKQARLALDEGVQQIRESVNPNAGEISVSFLHTLGSRLMPQLIAEFKKKYPNV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 F L+ + + + G+ D + P P L+ + +EP +L+ D LA Sbjct: 121 AFRLYQAANEHLQHMVETGEADICLSSPPLPNEHLEWTVLDTEPLYLVLPADHPLADRKE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V +++ V G R + D I + E +T+ +V+AG+G++IL Sbjct: 181 VAIRSIAHEDFVCFKPGYGLRYVFDQMCRGLSISPKLAFEGEEVSTILGLVSAGLGVAIL 240 Query: 243 PALALPLPEGSPLVVKRITP-VVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 P A + SP+ R++ ER + L K+ LS AA + V + Sbjct: 241 PKTAEHVH--SPVAFCRVSDYRSERTIGLAVLKDHYLSPAARNFKEFVIEY 289 >UniRef50_Q46SX0 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=Q46SX0_RALEJ Length = 300 Score = 286 bits (732), Expect = 9e-76, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 157/289 (54%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +N+ L+ L+ FV +A++ SF A E + +SQ A+S +++LE G RLL+RTTR V +T Sbjct: 4 INFGLEDLQAFVAIAEKGSFRMAAEALHISQPALSRRIEKLEMTLGSRLLERTTRRVDMT 63 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+Q LD L+S + G G V VAA + + H +P I R+P Sbjct: 64 HIGRQFLEEARAALDILDSAVLRLGDEVGLQRGLVTVAAIPSAALHFLPDAICRFGNRHP 123 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ + D V+ S+ G+ DFG+ G +++ AI +EP+ L RD A Sbjct: 124 GVRVRVIDENANAVLASVLSGESDFGLNFMGGQEPNIEFRAIRAEPYRLALRRDHPWAGR 183 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 D + W+ L G ++V SG+R LI+ A+A + I E H + +V AG+G++ Sbjct: 184 DCIAWEELAGQRMVSVSKQSGNRALIENAIAHLTRRPTIHYEANHVVGVLALVEAGLGMA 243 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 +LP ++LP ++ + P V+R L L+RR++R L AAEAL++++ Sbjct: 244 VLPGMSLPRDHPRLCGIELVEPSVDRVLALIRRRDRPLQPAAEALYEIL 292 >UniRef50_Q46Q42 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46Q42_RALEJ Length = 297 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 153/291 (52%), Gaps = 3/291 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN S+K L+ FV +A ++F+RA LSQSA S V+ LE G RL +RTTR V L+ Sbjct: 1 MNLSVKHLRAFVALATHRNFTRAARACHLSQSAFSALVQTLEEQAGSRLFERTTRHVELS 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G + RLL + + D ++ G+V +AA +I+ +P +A +RYP Sbjct: 61 ADGMRFEETARRLLGDFEAAFEDLRAHAERRKGRVSIAALPSIAGGDLPPLLAAFRQRYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I L D+ ++ +R+G DF + P DL+ E ++ + F L+C LA + Sbjct: 121 GIALELFDQLADGCIDLVRRGRADFALAPAPVQDDDLRVEPLVHDTFHLVCPTTHVLARK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + Q L G + S R +DAAL + ++ + V E+ H AT+ +V AG+G+S Sbjct: 181 RRITPQMLAGQPFIHLSRTSSVRQHLDAAL--HPLKLSSVMEVEHLATVAALVQAGLGVS 238 Query: 241 ILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVR 290 ++P+LAL + L V+ + P + R + LVR ++R S AA A+ D + Sbjct: 239 VVPSLALFQFQRDGLAVRPLQMPSLVRDICLVRLRDRGDSAAAAAMIDCLH 289 >UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae RepID=A9WIA6_CHLAA Length = 307 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 84/286 (29%), Positives = 137/286 (47%), Gaps = 3/286 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L L+++V V ++ SF++A E + +SQSAVS +V+ELE G LL+R R V T A Sbjct: 17 LNLHLLRIYVAVLEQGSFTKAAEVLTMSQSAVSRAVQELERQLGTTLLERRARGVAPTMA 76 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L R+ + + G++ + AS TI +L+P + HRRYP I Sbjct: 77 GTILGEHARRIFTHERLAIEALNELRGLQRGRLAIGASSTIGIYLLPPLLGNYHRRYPGI 136 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPG-PVGDLQCEAILSEPFFLLCHRDSALAVED 181 + L Q ++E + +D V P DLQ S+ ++ D L Sbjct: 137 ELFLDIGNTQQIIERLLSYQIDVAYVEGPVAANEDLQVVPWRSDEMVVIASPDHPLTRRV 196 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + LQ A ++++ SG+R +++ ALA + + V E+G + V+AG+G+S+ Sbjct: 197 TLDCSDLQDAPFIMREPGSGTRKVMEQALAAHNVTVRPVMELGSTEAVKQAVSAGLGLSM 256 Query: 242 LPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEAL 285 + + L G V+ ++RQL VR +R S A EA Sbjct: 257 VSRFTIQSELIAGKLRVLNIPGLNIQRQLSRVRLHDRPQSLALEAW 302 >UniRef50_A8IAC4 Transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IAC4_AZOC5 Length = 313 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 106/290 (36%), Positives = 163/290 (56%), Gaps = 4/290 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+ FV VAQ SFSRA +GLSQSA+S +V++LE GVRLLDRTTR V L+ Sbjct: 3 MNMNLRQLRAFVAVAQTGSFSRAARLLGLSQSALSQAVQQLEADLGVRLLDRTTRSVQLS 62 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G++ ++R+L +L+ L+D + + G V V +++ L+PQ +A+ +P Sbjct: 63 AIGREFLPGVQRVLADLDHQLQDLRDLKEHRRGHVTVTCVPSVALRLLPQVLAQFQEAHP 122 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + + + P+ ++ ++R GD + G+ PG DL +L++ F L+ RD LA Sbjct: 123 MVSVAVREAPRHQIITALRSGDAELGVANVPGDDPDLDSTFLLTDSFALVMRRDHPLAAH 182 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + V W+ A L+ +G R ++ L A E HPATL MV AG+G++ Sbjct: 183 ESVTWEEAGQAGLIAMAPGTGIRLEMERGLPA---PAVPHHEAEHPATLLAMVEAGVGVA 239 Query: 241 ILPALALPLPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVV 289 LP LA P P+ + L + + P VERQL L++R R L+ A AL + Sbjct: 240 PLPGLAWPRPDHAGLTFRPLVEPRVERQLFLIKRAGRDLTPAGRALHRAI 289 >UniRef50_B7IPY3 Transcriptional regulator, LysR family n=74 Tax=Bacillales RepID=B7IPY3_BACC2 Length = 300 Score = 284 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 69/298 (23%), Positives = 134/298 (44%), Gaps = 6/298 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L QLK F TVA+ + ++A E + ++Q ++S ++ LE GV L DR R++ L Sbjct: 1 MELLQLKYFQTVARLEHMTKAAEELHIAQPSLSKTIARLEKDLGVPLFDRQGRQITLNSF 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ R+ER+ EL+ R+ + + G + +A S ++P+ + R +P++ Sbjct: 61 GKVFLKRVERIFHELSEGEREIKDLAELQQGSITMAVS---IPRILPELLGSFLREHPNV 117 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 +F + + ++DF + P ++ E +++E FL+ L+ + Sbjct: 118 RFQQFLASTPSMKRQLENMEIDFCLSSVPVEGEEIVWEPLITEEIFLVVPSGHRLSNRES 177 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + ++ + + G R L D G +I E+ P + ++ G+GI+ + Sbjct: 178 IHLHEVKDEPFISMNTGYGFRHLTDEFCKEAGFTPHIAFEVDEPTVISDLIKQGLGIAFV 237 Query: 243 PALALPLPEGSPLV--VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 P L L L + ++ I P +R + L K R LS A+ + V D + + Sbjct: 238 PNLTL-LKNSTLAANKLRIIEPACKRTIGLSWSKKRYLSKTAQQFREFVIDYFSNIRT 294 >UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=Deltaproteobacteria RepID=A0LNI4_SYNFM Length = 302 Score = 284 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 90/296 (30%), Positives = 138/296 (46%), Gaps = 5/296 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + +L VF V + SF++A E + L+Q VS V+ LE G +L+DR REV+ T A Sbjct: 1 MDIHRLVVFCRVLEMGSFTKAAEAVCLTQPTVSEHVRALEETLGEKLIDRLGREVLPTPA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L ++ + ++ + LSG + + AS +++P+ I + YP I Sbjct: 61 GKILYQYARDIIQLRDEAVQALEKFKGNLSGALLIGASTIPGTYVLPELIGSFKKSYPAI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 Q L V+ G V+FG++ + E S+ L RD AV Sbjct: 121 QITLRITDSAEVVARTIDGGVEFGVIGARLEDRRIVLEEAFSDELVLAVFRDHPWAVRKS 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQA---NIVQEIGHPATLFPMVAAGIGI 239 V + L G +L++ SG+R +++ AL +G NIV E+G + + AGIGI Sbjct: 181 VSLEELAGEPFILRERGSGTRIVMNQALEAHGFSPTKLNIVAEMGSTEAIRQGIKAGIGI 240 Query: 240 SILP--ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQG 293 SIL A+A L GS V R LV+RKNR +S A + +R Q Sbjct: 241 SILSHRAVAEDLRHGSLFAVPLAGIRFSRPFFLVQRKNRQMSPLCSAFLNHLRFQA 296 >UniRef50_A5MZU7 Predicted transcriptional regulator n=3 Tax=Clostridium RepID=A5MZU7_CLOK5 Length = 289 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 67/291 (23%), Positives = 141/291 (48%), Gaps = 4/291 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L+ +FV V + + ++A E++ +SQSAVS + ELE H GVRL +R +R++ +T A Sbjct: 1 MTLRHFNIFVVVCDKMNMTKAAEQLFISQSAVSQVISELEGHYGVRLFERLSRKLYITQA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G++L ++ D +G+ +G +R+ AS TI A+++P+ I++ + + Sbjct: 61 GEKLLSYARYIIKLNMELENDMKTLGE--NGSIRIGASVTIGAYVLPKLISQFQKVNSET 118 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 +++ + V + + Q ++D +V D+ + + L+C A Sbjct: 119 DIKVYEENTEKVEKMLLQDEIDIALVEGETTHTDIINVPFMEDELVLICGSGHRFAKLTC 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L+ K ++++ SG+R + + N ++ I + T+ V+ G+GIS++ Sbjct: 179 IEPYELEKEKFIIRERGSGTRRTFEDKMKENHLKWQISWTCNNTDTIKIAVSEGLGISVI 238 Query: 243 PALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 ++ L G+ + +RQ ++ KN+ L+ + D +R Sbjct: 239 SRCSVINELVLGTLCEIPVKEIKFKRQFKIIYHKNKYLTEIMKHFIDFIRQ 289 >UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepID=A9WGB3_CHLAA Length = 304 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 78/299 (26%), Positives = 131/299 (43%), Gaps = 1/299 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ F+ VA+E +RA E++ +SQ A+S +K LE G L DR R + LT A Sbjct: 1 MELRQLRYFLAVAEEGHITRAAEKLYISQPALSQQIKLLEEEIGTVLFDRIGRRIRLTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L R L EL+ + G +R+ QT++A+L+P +A YP I Sbjct: 61 GEILVAHARRALQELSEAQVAIDELNGLQRGMLRIGVVQTVNAYLMPDLVAAFTNAYPAI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + + + + GD+ GI P + E + SE ++ R A Sbjct: 121 SLQIEELATRDIEQRLADGDLQIGIGFVPPETAGVTGEELFSEDLVVVVSRQHPWADLPQ 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 +P Q+L L+L +R L D GIQ + E+ ++ V ++L Sbjct: 181 LPVQSLHQQPLILLSTTFCTRRLWDRCTHIAGIQPRVQIEMNTIGSILAAVRQLTLATVL 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGRE 301 PA+ L + + + + P R + L+ R N A A + R + + +E Sbjct: 241 PAMVLS-GQPDLVGIPLVDPTPRRTVGLLFRHNAYRCAATRAFVAMTRAKLRVWASRQE 298 >UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7X5_ACIC5 Length = 305 Score = 283 bits (726), Expect = 4e-75, Method: Composition-based stats. Identities = 83/305 (27%), Positives = 151/305 (49%), Gaps = 6/305 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M L+ ++ F+ VAQ +F+RA + + +SQSA++ +++LE GV+L DR R V LT Sbjct: 1 MINELRHIRAFLAVAQHANFTRAAQELHVSQSALTVQIQQLEEALGVKLFDRNKRRVALT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 DAG+++ L+R++ + + + T + G + +A ++++ ++ ++ +P Sbjct: 61 DAGREVIAPLQRIVVDAEAIVSRTREITGLRRGVLSMAVLPSMASGILSTALSRFTAAHP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I +HD V+E +++ +VDFG+ +L + ++ F L+ Sbjct: 121 GIMIHIHDVVADQVIEKVKKEEVDFGVATVMHADKELTLMPLFTDRLFAFLPEQHPLSSR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V Q + LVL + R ++D AL +G+ A E + +T +V AG GI Sbjct: 181 ASVSLQQISDYPLVLMARGTSVRSMVDQALRDHGLTATAAYEANYMSTALSLVRAGFGIG 240 Query: 241 ILPALALPLPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 ILP A + LV I P + R + ++ RK RS S A + + ++RD + Sbjct: 241 ILPEDAGTMGSAQNLVALPIVRPQLTRPIHVLMRKGRSASPAVQQMLQILRD-----ITR 295 Query: 300 REGDP 304 + GDP Sbjct: 296 KSGDP 300 >UniRef50_C9RY94 Transcriptional regulator, LysR family n=8 Tax=Bacillales RepID=C9RY94_GEOSY Length = 304 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 69/300 (23%), Positives = 134/300 (44%), Gaps = 3/300 (1%) Query: 8 LKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLA 67 L VFV V ++ +F++A E + ++Q AVS ++ LE +LL RT + V L AG+ + Sbjct: 5 LYVFVKVVEKGNFTKAAEELHMTQPAVSQHIQTLERLFDTKLLYRTNKYVKLNKAGEIVY 64 Query: 68 LRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLH 127 + +L + + + SG++ + AS T +++PQ IA+ H+ YP I+ + Sbjct: 65 HYAKEILGLYTRMNQLLDDLMNRASGELSIGASYTYGEYVLPQMIAKLHQHYPLIKPTIT 124 Query: 128 DRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQA 187 ++E +R +D GI+ ++ E + ++ A ++ V + Sbjct: 125 IGNSNEIVEMVRGHQLDVGIIEMDIEPKNVYIEPFAQDQMVVVASAHHPYAQKETVQMED 184 Query: 188 LQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALAL 247 L+ A ++++ SG+R D ++ + + E G + V AG+G++ L + Sbjct: 185 LRNATWIVRETGSGTRKATDEFFLKHNFFPSSIMEFGSTQLIKEAVEAGLGLTFLSLWTI 244 Query: 248 --PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALM-AGREGDP 304 L G+ ++ R LV K + A E +VR ++ + R P Sbjct: 245 KKELSFGTLKIIPINDEPFFRHFSLVTPKTPFYTKAMELFLTIVRTHQPSISHSPRPPSP 304 >UniRef50_Q127N6 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q127N6_POLSJ Length = 328 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 86/291 (29%), Positives = 142/291 (48%), Gaps = 3/291 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+ FV VA+ SF+ A + ++QSA+S +KELE+ GV+++ R+TR+V L+ Sbjct: 1 MNVTLRQLRAFVAVAKSASFTEAAATLHITQSALSGLIKELEHVLGVQVVYRSTRKVQLS 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 + G + R+L +L+ + SG VRVAA Q ++ L+P IA + +YP Sbjct: 61 EVGGEFLPLATRILQDLDEAYHAIHDLKALKSGVVRVAAPQLMACTLMPDAIAAFNSKYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +Q L D + V + G+VDF I + ++ ++ PF + D L Sbjct: 121 AVQIRLSDCAVEAVQSKVHSGEVDFAIGPEREVSPEIATHSLFEIPFVAVFPPDHPLGKL 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI- 239 V W + L+ R D A + + E+ T MV+AG+G+ Sbjct: 181 KRVTWTDISRYPLISLQGEYTQRLSADLQAASGNLTLSPGMEVTFMTTALSMVSAGLGVT 240 Query: 240 SILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVV 289 + LP A L L + + P + R+ L+ +K+R LS AA+ D + Sbjct: 241 TCLP-YATSLLNLYGLQTRLLQAPTLRRKFYLLTKKDRPLSPAAQGFSDFL 290 >UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Tax=cellular organisms RepID=CYNR_ECOLI Length = 299 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 83/297 (27%), Positives = 145/297 (48%), Gaps = 2/297 (0%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 + + F+ VA+ SF+RA + +SQ A+S +++LE GV L DR+ R + LTDAG+ Sbjct: 4 RHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEV 63 Query: 66 LALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFV 125 R L EL + R + G +R+A + T +++ I +A+ + RYP I Sbjct: 64 WRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQ 123 Query: 126 LHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPW 185 L + Q+ + + + + ++D GI P +L+ +L+E L+ + LAV + V Sbjct: 124 LQEMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIPLLTESLALVVAQHHPLAVHEQVAL 183 Query: 186 QALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPAL 245 L KLVL +R ID + G+ +V E + + ++ ++LPA Sbjct: 184 SRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLLPA- 242 Query: 246 ALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGREG 302 A+ + P++ER +L+RRKN + AA+A + D+ A++ G E Sbjct: 243 AIATQHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALDKC-AVVGGNES 298 >UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Bacillales RepID=C6J455_9BACL Length = 307 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 76/295 (25%), Positives = 132/295 (44%), Gaps = 7/295 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL + +A+EK+FSRA +++ ++Q ++S + +LE GV+L R T V LT A Sbjct: 1 MELRQLLYTLKIAEEKNFSRAADKLHIAQPSLSQQLSKLEQELGVKLFQRNTSTVELTYA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G ++++D + ++ + Q +G+V V + +HL+P + YP+I Sbjct: 61 GASFIAHAQKIMDAVAQLRQEMDDISQLRAGRVVVGSMPITGSHLLPYVLPAFKASYPNI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV--- 179 Q L + + + +G D ++ P L E I E L D L Sbjct: 121 QVTLLEDTSLNLEKLTAEGGTDLSLLSLPLLEPTLSYEPIGEEIIDLAVPPDHPLTKTPG 180 Query: 180 --EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGI 237 E V + L+ ++ G R + G + N+V E + T+ +VAAG+ Sbjct: 181 VLEQGVEMKQLENEPFIVLKKGQGFRKMTADLCREAGFEPNVVFESNNIETVQSLVAAGM 240 Query: 238 GISILPALALPLPEGSPL--VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 GI+++P + + P R L++ RK R LS AAEA + + Sbjct: 241 GITLVPRFIARAKRSELIPAYLPLAAPAPSRTLVIAYRKGRYLSKAAEAFIETFK 295 >UniRef50_B2JVU4 Transcriptional regulator, LysR family n=43 Tax=Proteobacteria RepID=B2JVU4_BURP8 Length = 322 Score = 282 bits (723), Expect = 9e-75, Method: Composition-based stats. Identities = 96/299 (32%), Positives = 156/299 (52%), Gaps = 1/299 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +N+ L L+ F V + SF +A E + +SQ A+S + +LE GVRL +RTTR V LT Sbjct: 3 INFDLNDLQAFRAVVELGSFRKAAEAVNISQPALSRRIDKLEEALGVRLFERTTRSVTLT 62 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ A E+LLD+L+ L + G V +A +++ + +P +A HRR+P Sbjct: 63 TVGRVFAPSAEQLLDDLDVALLGIRDVSSSRLGHVTIACVPSVAYYFLPGAVASYHRRFP 122 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ + D V+ ++ G+ DFG+ D++ + +L E F C RD LA + Sbjct: 123 RIRVKILDSSANDVLAAVISGEADFGVSFMGSQEPDVEFKMLLQERFVAACRRDHPLARK 182 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V W L + V D SG+R L+D AL + V E H T+ +V AG+G++ Sbjct: 183 KRVTWNELYEHEYVSVDKTSGNRLLLDQALGAVSPRMPSVCETRHVTTMLGLVEAGLGVA 242 Query: 241 ILPALALPLPEGSPLV-VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 +P++A+P L V + PVV+R++ +VRR+ R L+ AA+ + + + A Sbjct: 243 AVPSMAMPGRNHHILTSVPLVEPVVKRRVGIVRRRGRPLTPAAQEFHKTIVEMRHGAAA 301 >UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=Actinomycetales RepID=C7PVI0_CATAD Length = 297 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 72/294 (24%), Positives = 137/294 (46%), Gaps = 3/294 (1%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 QL+ F+ VA+ + F+RA E + ++Q ++S ++ LE+ G L R + LTDAG+ Sbjct: 3 FHQLRYFIAVAETRHFTRAAEALHVTQPSLSQQIRALEHELGADLFLRARGNITLTDAGE 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 L R+L + ++ R+ + + G VR+ A+ ++ L+P + HRRYP IQ Sbjct: 63 ALLPMARRILADADAARREVQELAELRRGHVRLGATPSLCTGLLPDVLRTYHRRYPGIQL 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGD--LQCEAILSEPFFLLCHRDSALAVE-D 181 ++ + ++ + +G +D +V+ P P L E +L E ++ + + Sbjct: 123 LVQESGSHDLVRDLARGALDLALVVLPLPSPSPALTTEELLREDLVVVSAPNLPPPGDGR 182 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V L+ +L++ + R L AA G + E G + AG+G++I Sbjct: 183 QVRIADLEHEQLIMFRHGYDLRDLTVAACRAQGFEPVFAIEGGEMDAVLGFARAGLGVAI 242 Query: 242 LPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 +P++ + S V P + R + L R + +L AA+ + ++ A Sbjct: 243 VPSMVAQNVDPSLRVTPIAPPALHRTIALAHRTDVALPRAAQEFRRTLLERTTA 296 >UniRef50_A6VV39 Transcriptional regulator, LysR family n=6 Tax=Gammaproteobacteria RepID=A6VV39_MARMS Length = 295 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 134/292 (45%), Gaps = 2/292 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +K L+ F+ +A+ +SF++A +++G++Q AVS ++K+LE G+ L+ R R + LTD Sbjct: 1 MDIKPLRYFIAIAKTESFTKAAQQLGVAQPAVSMAIKKLEADLGLTLIHRADRNIGLTDE 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G++L + E+++ + L + + G+VRV + ++ P + +YP I Sbjct: 61 GKKLLIHAEKIIQATDDALLEMSELKGLSQGEVRVGIPSMLGSYYFPPILMAFRHKYPTI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + + + G++D +++ L+ +A++ E + D + + Sbjct: 121 TLKVIEGGTWQLQKMLENGELDLSVIVAETLPDGLETQALIREEMLVTIATDHPFSQLEK 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + +A +LV+ R ++D I E + + G GIS L Sbjct: 181 ISPEAFFDEELVMFKEGYFHRRIVDKLAKACKKTPKIGFETNLIPLIKSITQQGFGISTL 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 LA+ + E L+ + P + L + RK+ LS A A + V + G Sbjct: 241 --LAMVIEEDDDLITRSFDPPIWLDLGIAWRKDSYLSKANRAFLEFVNEHGR 290 >UniRef50_C0ZI27 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI27_BREBN Length = 307 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 77/289 (26%), Positives = 131/289 (45%), Gaps = 3/289 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ F+ + +E FSRA E++ SQS +S +K LEN GV L DR + + LT+A Sbjct: 1 MELRQLEYFMAICEEMHFSRASEKLCTSQSNLSQQIKFLENELGVPLFDRLGKRITLTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L + + ++ M G + + + L + E HR YP Sbjct: 61 GKVLLEQSRHVFSHIDYAREAIAAMKNNEGGTLTIGVLPGDADLLFDALLVEFHRLYPKT 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + ++E I G++D G+ + P P + + E F L HR LA E Sbjct: 121 SLSVIE--STRIVEQITSGEIDLGVTVLPEPDERITVIPLFHEEFALAVHRAHPLAKEKA 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + LQ K+V+ +R LI+ + G + E + +V GIG IL Sbjct: 179 IKFGQLQEVKMVMFPPDHQARQLINRYCIQEGFRLQPHIETTTLQSQLSLVKKGIGGCIL 238 Query: 243 PALALP-LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 P+L L + + ++ + P + + LV RK++ + AA D ++ Sbjct: 239 PSLLLQNVNDDEIAIINLLHPTPSQDICLVYRKDKYMGFAARTFIDTLQ 287 >UniRef50_P0ACQ6 Hydrogen peroxide-inducible genes activator n=273 Tax=cellular organisms RepID=OXYR_ECO57 Length = 305 Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 2/292 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +++ L+ V +A+ + F RA + +SQ +S +++LE+ GV LL+RT+R+V+ T A Sbjct: 1 MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L + +L E+ + G+ +SG + + T+ +L+P I H+ +P + Sbjct: 61 GMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKL 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + LH+ ++ + G +D I+ + EP L + D A + Sbjct: 121 EMYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPLFDEPMLLAIYEDHPWANREC 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 VP L G KL++ + R G + TL MVAAG GI++L Sbjct: 181 VPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLL 240 Query: 243 PALALPLPEGSPLVV--KRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 PALA+P VV I P R + LV R L + E L + +R + Sbjct: 241 PALAVPPERKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRAR 292 >UniRef50_A5D2L1 Transcriptional regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D2L1_PELTS Length = 303 Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 75/295 (25%), Positives = 132/295 (44%), Gaps = 5/295 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +LKQL+ F+ VA+ +SF++A ++ +SQ AVS +K LE V L R ++V+LT+A Sbjct: 1 MNLKQLEAFLLVAELQSFTKAARQLYMSQPAVSFQIKALEEDLQVALFQRGDKKVILTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L +++L + G + V AS +L+P I + +YP I Sbjct: 61 GRLLYPEAKQMLKHYQKIKVGLDDLRDLKKGHLVVGASTIPGEYLLPLLIGKFKEKYPGI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L V + +R+ ++D GI L+C + + L+ + A Sbjct: 121 KITLKVSGSGQVGQWVREREIDLGITGAFIEGESLECRPWIDDQLVLIVNPSHRWASLGA 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIV---QEIGHPATLFPMVAAGIGI 239 V L+ ++++++ SG+R I+ L + + E+G + V AG+G+ Sbjct: 181 VQASELKNEPMIMREHDSGTRRTIEKKLKECNLSLEKIPQGMELGSTRAVITAVEAGLGV 240 Query: 240 SILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 SI+ A L G V+ + R L VR K A A + + D+ Sbjct: 241 SIVSRYAAREALELGRVKEVQVTGLNMNRSLYQVRHKQGIEGFAIRAFTEFINDR 295 >UniRef50_C7RSN5 Transcriptional regulator, LysR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RSN5_9PROT Length = 300 Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 84/297 (28%), Positives = 138/297 (46%), Gaps = 4/297 (1%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 ++L+VF VA+ SF++AGE + ++Q AV+ +K+LE RL DR + LT AG+ Sbjct: 4 RRLQVFHAVAKHLSFTKAGEALHMTQPAVTFQIKQLEERFNTRLFDRGGGRIALTQAGEL 63 Query: 66 LALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFV 125 + ER+L M Q+SG + V AS TI+ ++P + E + RYP ++ Sbjct: 64 VLDYAERILGLSADLDLRVAEMTGQMSGSLLVGASTTIAEFMLPPILGEFNVRYPQVRAR 123 Query: 126 LHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPW 185 L + + +I +D G+V LQCE + ++C LA V Sbjct: 124 LTVANSEAISNAIAAHTLDIGLVESLVNHPSLQCEVCGDDELQVICTPTHPLAQRTDVDA 183 Query: 186 QALQGAKLVLQDYASGSRPLIDAALARNGIQA---NIVQEIGHPATLFPMVAAGIGISIL 242 ++L + ++ SG+R + D L G++ + E+ P L +VA G+G SI+ Sbjct: 184 RSLMAHDFIAREPGSGTREVTDDYLRACGVEPAQIKTLMELASPEALKGVVATGLGFSIV 243 Query: 243 PALALPLPEGSP-LVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 + LV + P ++R L LV +K R S D R++ L A Sbjct: 244 SRASFEKERQLGSLVAIPLRPRLKRTLSLVYQKERFRSKVVLTFVDFARNKLRELSA 300 >UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F961_ACIC5 Length = 288 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 76/284 (26%), Positives = 135/284 (47%), Gaps = 1/284 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 QL+ +A+ +FSRA ER ++Q ++S V +LE GV+L DR R + +T+A Sbjct: 1 MEFHQLRYVCAIAETGNFSRAAERCQVAQPSLSQQVLKLEEDLGVKLFDRLGRSLRITEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ +L ++ + + + G V V TI+ +L+P+ A R+YP+ Sbjct: 61 GRAFLPHARSILHQMEAARASVAGKSKDVRGSVAVGVIPTIAPYLMPRYTAAFARKYPEA 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + ++ES+R +D ++ P DL+C +L+EP F + +D A Sbjct: 121 RLRIVEETTPVLVESLRNLSIDLAVLALPLRHKDLECIPLLTEPMFAVLPKDHPRASAQT 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + L+G V+ R L AA + + I E G +LF MVAAG+G+S++ Sbjct: 181 LSLKDLRGETFVMLRDGHCFRDLSLAACSHARVTPRIAFESGQFRSLFGMVAAGMGVSLV 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALW 286 P +A+ G V+ R ++ + RS + +A Sbjct: 241 PQMAMDRSAGC-AYVRLSDARAARTVVAATLRGRSFNHMQQAFL 283 >UniRef50_P25544 RuBisCO operon transcriptional regulator n=13 Tax=Proteobacteria RepID=RBCR_CHRVI Length = 302 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 74/295 (25%), Positives = 140/295 (47%), Gaps = 3/295 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ SL+QL+VF VA+ S++RA E + LSQ AVS V++LE+ G+ L +R ++VVLT Sbjct: 1 MHVSLRQLRVFEAVARHNSYTRAAEELHLSQPAVSMQVRQLEDEIGLSLFERLGKQVVLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+++ + L + G +R+A + T+ + P+ +A +R+ Sbjct: 61 EAGREVFHYSRAIGQSLREMEEVLESLKGVSRGSLRIAVASTV-NYFAPRLMAIFQQRHS 119 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I L ++ +++ + VD ++ P +++ EA + P ++ D LA E Sbjct: 120 GIGLRLDVTNRESLVQMLDSNSVDLVLMGVPPRNVEVEAEAFMDNPLVVIAPPDHPLAGE 179 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + L V+++ SG+R ++ + G ++ + V +G+G+S Sbjct: 180 RAISLARLAEETFVMREEGSGTRQAMERFFSERGQTIRHGMQMTRNEAVKQAVRSGLGLS 239 Query: 241 ILPALALPLPEGSPLVVKRITPVV--ERQLMLVRRKNRSLSTAAEALWDVVRDQG 293 ++ + L + +V RQ LV R+ + LS AA A + V + Sbjct: 240 VVSLHTIELELETRRLVTLDVEGFPDRRQWYLVYRRGKRLSPAAGAFREFVLSEA 294 >UniRef50_B6FPK4 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPK4_9CLOT Length = 301 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 144/291 (49%), Gaps = 4/291 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +++ L+ FV V Q++S ++A E + +SQ +VS +++ELEN+ +RL DR + + +T+ Sbjct: 1 MTIRHLRTFVIVFQKESITKASEILHVSQPSVSLAIQELENYYHIRLFDRIGKRLSITEQ 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L ++ + + G +R+ +S TI ++PQ I E +RY ++ Sbjct: 61 GKWLYDYALHIVSMFDEMETEVKTWNN--KGTLRIGSSITIGNFILPQLIEEFQKRYREV 118 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + + + I +VD ++ +Q E ++ +P L+C +S L ++ Sbjct: 119 EIKVSVCNTKTIEQYILNNEVDLALIEGKTEYEQIQMEHLMEDPLCLICAANSELVKQEK 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L+ ++L++ S R +I+ +L + I ++ E + VA +GISIL Sbjct: 179 ISLIDLERYPMILRERGSAVREMIEESLGYHQIHHRVIWESVSTQAIIRAVAKKLGISIL 238 Query: 243 PALALPLPEGSPLV--VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 P L + LV ++ + RQ + K + L+ AA+ ++ ++ Sbjct: 239 PYLLVRDELARGLVKQLQVEEFHLSRQFSIAYHKKKYLTPAAKGFMELCKE 289 >UniRef50_P20668 HTH-type transcriptional regulator gltC n=17 Tax=Bacillales RepID=GLTC_BACSU Length = 300 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 135/296 (45%), Gaps = 2/296 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ F+ VA+ + S A + + ++QSA+S + LE V L +R R + LT Sbjct: 1 MELRQLRYFMEVAEREHVSEAADHLHVAQSAISRQIANLEEELNVTLFEREGRNIKLTPI 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G++ + ++ + ++ G V++ ++++ L+P I+ YP + Sbjct: 61 GKEFLIHVKTAMKAIDYAKEQIDEYLDPHRGTVKIGFPTSLASQLLPTVISAFKEEYPHV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVID-PGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 +F+L ++++E++R D+D ++ P D+ + + +E + L + LA + Sbjct: 121 EFLLRQGSYKFLIEAVRNRDIDLALLGPVPTNFSDITGKILFTEKIYALVPLNHPLAKQK 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V L+ + VL R + + G + E + +V+AG+G+++ Sbjct: 181 TVHLIDLRNDQFVLFPEGFVLREMAIDTCKQAGFAPLVSTEGEDLDAIKGLVSAGMGVTL 240 Query: 242 LPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 LP V I P V+R + +++ KNR L+ +A ++ V + L Sbjct: 241 LPESTFAETTPRFTVKIPIEFPQVKRTVGIIKPKNRELAPSANDFYEFVIQFFSKL 296 >UniRef50_D1BNW2 Transcriptional regulator, LysR family n=4 Tax=Veillonellaceae RepID=D1BNW2_VEIPT Length = 307 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 79/292 (27%), Positives = 131/292 (44%), Gaps = 5/292 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 LK FV VA +KSFS+A + +SQSA+S ++K LE+ GV L R + V LTD Sbjct: 1 MDFHHLKYFVEVADQKSFSKAARNLHISQSAISRTIKALEDELGVVLFMRNAKSVELTDG 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G +R++ D + G +R+ A + Q + E + YP I Sbjct: 61 GTIFLTHAKRVVFMFEHLKTDFENEFRLEQGSIRIGIPPITDAPIFAQLLGEFKKVYPQI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L+++ + V S+++G +D GI+ + + + S+P ++ + S LA E Sbjct: 121 ELELYEQGSKKVEISVQEGLIDIGIICTKPNPKEFESFYLTSDPLSVIIPKSSPLAKEKE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + L VL I A G Q +IV E + V+A + I++L Sbjct: 181 IRLEMLADESFVLHKDDFNLHDEIIKACKHTGFQPHIVFETSQRDLMLQTVSANLAIALL 240 Query: 243 PALALPL-----PEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 P+ P GS +VV+ + P + L ++ +K LS A+ D V Sbjct: 241 PSRLCPEVGENTEVGSKVVVRPLVPEIIHTLYVIWKKGHYLSHASRLWLDFV 292 >UniRef50_A6UGP0 Transcriptional regulator, LysR family n=2 Tax=Sinorhizobium RepID=A6UGP0_SINMW Length = 298 Score = 280 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 86/291 (29%), Positives = 150/291 (51%), Gaps = 1/291 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+ F+ VA+ F A + +GL+QSA+S +++LE RL DR TR V LT Sbjct: 1 MNVTLRQLQAFIAVAELGRFHLAADHLGLTQSAISILIRDLEAVLKHRLFDRHTRMVSLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG + + +++ +L + + + G+V +AA+ ++A L+P IA +RYP Sbjct: 61 TAGAEFLPQARKIMSDLEIAVTNVHELANLQRGRVTIAAAIVLAATLLPPVIARFVKRYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 DIQ + D P++ + ++++ + D GI ++Q ++ + L+C D A Sbjct: 121 DIQVQVRDMPEEEIRSALKRNEADLGIGTVSADDPEIQASVLMRDQLTLICRSDHRFARA 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V W L G L+ + R L+D AL +G++ E+ T MVA G+GI+ Sbjct: 181 PQVSWANLAGEALIGLAKDNPLRGLVDHALIASGVEVKTRYEVRFSTTAISMVAEGLGIA 240 Query: 241 ILPALALPLPEG-SPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 ILP + L +V + PV+ R + +++ + LS AA + + + Sbjct: 241 ILPENSRQLTTNVDVRIVDLVDPVISRNISILQYRQPMLSPAAAKMKEFLM 291 >UniRef50_B0T3V7 Transcriptional regulator, LysR family n=1 Tax=Caulobacter sp. K31 RepID=B0T3V7_CAUSK Length = 294 Score = 280 bits (717), Expect = 4e-74, Method: Composition-based stats. Identities = 94/290 (32%), Positives = 150/290 (51%), Gaps = 1/290 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ +L Q++ FVTVA SF+RA E +GLSQ A+++ +++ E G+RL DR+TR V LT Sbjct: 1 MHITLGQIRAFVTVASTFSFTRAAEVLGLSQPALTNRIRQFEESLGLRLFDRSTRSVELT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 + G++L RL+ E + + ++ G VR+A + +A L+P IA P Sbjct: 61 NVGRELLPIFRRLVGEFEGAVINARDYASKVKGVVRLACLPSCAATLLPDLIARFQIDNP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 FV+ D V +R+ VDFGI + G GDL+ + + ++ R+ +A Sbjct: 121 SATFVVEDALNSRVATMVREDRVDFGIGMADGEAGDLELTRLFDDTLQVVHPREHPIAQA 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + + L L+L + S R L++ A G A E+ + +T +V AG+G+S Sbjct: 181 PVIDVETLSHYPLILMNRGSSVRDLVEGAFLAAGRTATPACEVTYMSTAVALVRAGLGLS 240 Query: 241 ILPALALPLPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVV 289 ILP+ A+ L + + I P R L+LVRR+N L EA D + Sbjct: 241 ILPSTAVELRSQPDVAARSIDDPAFVRTLVLVRRRNAPLRPVVEAFIDSI 290 >UniRef50_B1I114 Transcriptional regulator, LysR family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I114_DESAP Length = 296 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 78/293 (26%), Positives = 138/293 (47%), Gaps = 5/293 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L L+ FV VA+ KSFSRA + + L+Q AVS + LE H G +L++RT+R V LTDA Sbjct: 1 MNLSYLETFVMVAKHKSFSRAAKTLSLTQPAVSKHISLLEAHYGTKLVNRTSRRVELTDA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L R++ + + +++ G++ + AS +++P+ +++ + YP + Sbjct: 61 GIVLYHFAGRIIATMERAKEEIVSFSEEVKGRLSIGASTIPGHYILPRILSDFKKEYPLV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L V+ +++ + G++ P ++ C S+ L+ RD L Sbjct: 121 NVSLEVSNTGKVINRLQEEAIQVGVIGAPVDSPEINCTEFSSDEVVLIMPRDHPLVFRKE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGI---QANIVQEIGHPATLFPMVAAGIGI 239 + L G K+V+++ SG+R +++ LA I I E G + V AG+GI Sbjct: 181 LVTDDLVGEKVVVRENDSGTRRIVEEKLAAADIPLDSLQIAGEFGSTEAVLAAVEAGLGI 240 Query: 240 SILPALALPLPEGSPLVVKRI--TPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 S + A +V R R L ++ ++RSLS A ++ Sbjct: 241 SFVSRWAAEKVALEGRIVMRTLQDLRFSRSLYIIYLRDRSLSRPTHAFLSFIK 293 >UniRef50_A3I8L6 Transcriptional regulator, LysR family protein n=1 Tax=Bacillus sp. B14905 RepID=A3I8L6_9BACI Length = 292 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 64/289 (22%), Positives = 137/289 (47%), Gaps = 3/289 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++ L F+ V +E F++A E++G+SQ +S ++ LE+ G+ L DR +++V+T+A Sbjct: 1 MEIRHLHYFMAVCEELHFTKAAEKLGISQPTLSQQIRVLEDELGMPLFDRIGKKIVVTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L +L+ L + + + G++RV + + I Q + + H+++P + Sbjct: 61 GALLFTYATAMLNTLQNVKGAIKDLQEVQGGQIRVGIMPSDLDYRITQLVIDFHQKFPRV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + +M + + +VD GI + P L + E + + ++ A + Sbjct: 121 KLTIL--ASIDIMRQVLENEVDIGIGTNVEPHDRLVIIPLRKEEYVVTVSKEHPWAHREA 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V L+ LV+ R +++ + ++G Q + + E ++ +V A IG ++ Sbjct: 179 VTIAELKDLPLVMYPEGFLGREIVEETVKKHGFQLHTILETSSVTSIMNLVRANIGATVQ 238 Query: 243 PALALPLPEGSPLVVKRITPVV-ERQLMLVRRKNRSLSTAAEALWDVVR 290 P + S L + R+T + R L ++ R +R +S A A + ++ Sbjct: 239 PYPLIQQMNDSDLRIIRLTDTIPSRSLSIIYRVDRYVSHATTAFIEQIK 287 >UniRef50_Q46S80 Transcriptional regulator, LysR family n=4 Tax=Cupriavidus RepID=Q46S80_RALEJ Length = 310 Score = 279 bits (716), Expect = 6e-74, Method: Composition-based stats. Identities = 118/290 (40%), Positives = 173/290 (59%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN SL QLK F VA+ KSF+RA +GL+QSAVS SV+ELE RL DRTTR+V LT Sbjct: 1 MNISLPQLKAFAAVARHKSFTRAAAELGLTQSAVSRSVRELEEEIDQRLFDRTTRQVELT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 DAGQ L+ R+ L++E+ TLR++ + G V++A +S+ +P +A + +P Sbjct: 61 DAGQHLSQRICHLIEEVEQTLRESQGAARPSQGMVQIATDPVLSSMSVPAWLAGCRKAWP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I L DR Q+ V++S+R G+VDFGI DP DL CE + +P+ + LA Sbjct: 121 AIAIHLKDRSQESVLQSVRSGEVDFGIATDPQSSDDLYCEPLCVDPYHAVLPAQHPLASR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 D + W L A + D G +P+++ AL+ + ++A +Q +GH A +F MVA G+GI Sbjct: 181 DAIAWGDLSNANVFTLDQQCGVQPVVEKALSHHHVRAGSLQLLGHFAAVFGMVALGLGIG 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 ++P+ A V++ + P V +MLVRRK+RSL A A+WD +R Sbjct: 241 VVPSRAQAGGLHPAAVMRPLRPQVTSTVMLVRRKSRSLKPNAAAIWDALR 290 >UniRef50_B8FPA0 Transcriptional regulator, LysR family n=4 Tax=Clostridiales RepID=B8FPA0_DESHD Length = 295 Score = 279 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 70/288 (24%), Positives = 128/288 (44%), Gaps = 1/288 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +K L+ FV VA++KSFS+A E+ ++QS +S +K+LE G L +RT++ V LTD Sbjct: 1 MEIKHLEYFVEVARQKSFSKAAEKCHVTQSTISKLIKDLEGELGTSLFNRTSKYVQLTDT 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G + ++ + + + + GK+ + L + + E ++YP I Sbjct: 61 GAIFLDQALEIVTKFENLTHEFQNRIKLERGKIAIGLLPITGTTLFAELLGEFKKKYPQI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L +R + V+ I G +D G+V + A +P +++ + ++ Sbjct: 121 EISLSERGSKKVIMDILDGTLDVGVVCSVPDSQYFESFAFAEDPLYVIVSVRNPISKLAS 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + ++L VL I + G NI+ E + MVAA +GI+ L Sbjct: 181 IDLKSLADEPFVLYSSEFSLHDEIISKCKNEGFAPNIIFETSQFELMTQMVAADLGIAFL 240 Query: 243 PALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVV 289 P A + V +T P + Q+ ++ ++ RS+S AA Sbjct: 241 PGAACREMDPRRFAVIPVTNPQIIHQMFIIWKRGRSMSHAANLWLQFA 288 >UniRef50_B1Y5W5 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B1Y5W5_LEPCP Length = 316 Score = 279 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 85/299 (28%), Positives = 140/299 (46%), Gaps = 4/299 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + +QL+VF VA+ SF RA E + L+ AV+ VKELE+ + L DR R+V LT A Sbjct: 4 VTFRQLRVFTEVARHLSFVRAAEALHLTPPAVTMQVKELESAIELPLFDREGRKVSLTTA 63 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + +RLL L R + SG + V T + + +PQ +A +P I Sbjct: 64 GEYFLVYAKRLLSTLKEADDAMARFRKVESGVLSVGMVGT-AKYFVPQLLARFRIEHPGI 122 Query: 123 QFVLHDR-PQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + L ++ ++ ++QG+VD I+ P + E + P + + + Sbjct: 123 ELKLQVGANREQLVALLQQGEVDLAIMGRPPREMATRAEPFAAHPHVFIAPPGHPVLAQG 182 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 L L+ ++ ASG+R L+D + ++ I E+ T+ V AG+G+S Sbjct: 183 RTTLSELASYPLIAREPASGTRALMDRFFQEHRVELRIAMEMPSNETIKQAVMAGMGLSF 242 Query: 242 LP--ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 L + L L G +V + R +V ++R LS AAEAL + + G A +A Sbjct: 243 LSLHTIGLELRCGLLELVHVENAPIVRTWNIVHMQSRLLSPAAEALRYFMLEHGEAHLA 301 >UniRef50_D0KYG7 Transcriptional regulator, LysR family n=3 Tax=Gammaproteobacteria RepID=D0KYG7_HALNC Length = 312 Score = 279 bits (715), Expect = 9e-74, Method: Composition-based stats. Identities = 77/306 (25%), Positives = 140/306 (45%), Gaps = 9/306 (2%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 ++LKVF TVA+ SF++A E + +Q AV+ V++LE H RL DRT V LTD G Sbjct: 4 RRLKVFNTVARLLSFTKAAEALHTTQPAVTFQVRQLEEHFDTRLFDRTHNRVTLTDVGHV 63 Query: 66 LALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFV 125 + ER+ + + R M ++ G + + AS TI+ +++P + + ++ D+ Sbjct: 64 VYEISERMFELYDEMDRRVKEMTGEVGGSLNIGASTTIAENMLPALLGKFRLKHRDLAVR 123 Query: 126 LHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPW 185 L + ++ + VD IV +L E + ++ D LA + V Sbjct: 124 LKVGNTEAIVSMVEHNVVDLAIVEGTVGNKNLLVETCRRDELVVILPPDHQLAGLESVSL 183 Query: 186 QALQGAKLVLQDYASGSRPLIDAALARNGIQ--ANIVQEIGHPATLFPMVAAGIGISILP 243 L + ++ SG+R ++ L +G ++ E+G P + V AG+G+SI+ Sbjct: 184 DQLMSYDFICREEGSGTREMVLNYLIEHGYSDGWDVCMELGSPEAIKGAVQAGMGLSIMS 243 Query: 244 ALALPLPEGSPLV-VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGREG 302 A + L+ ++P + R VR++++ A E L + RD Sbjct: 244 ASGITKELKLGLLKAVPLSPRLFRDFSFVRQRHKFRLPAMEDLLEFSRDY------CSNS 297 Query: 303 DPLYQI 308 P++ + Sbjct: 298 SPMHDL 303 >UniRef50_A0RKW5 Transcriptional regulator, LysR family n=81 Tax=Bacillus RepID=A0RKW5_BACAH Length = 306 Score = 279 bits (715), Expect = 9e-74, Method: Composition-based stats. Identities = 75/291 (25%), Positives = 135/291 (46%), Gaps = 4/291 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN + LK+FVTV ++K FSRA E + LSQ VS ++ LEN G L+ R+ + V +T Sbjct: 10 MNVDI--LKIFVTVVEQKHFSRAAELLNLSQPGVSMHIRNLENEFGTTLIQRSPKHVQVT 67 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG L + +++L + + ++G +R+ AS TI +L+P+ +A P Sbjct: 68 EAGNILYIHAKQMLSLYEDAKQKINELHNVVTGTLRIGASFTIGEYLLPKILANYANENP 127 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ + V++S+R +D G+V D+ E + + L+ + L Sbjct: 128 HVEVHTFISNTEDVLQSLRSNQIDIGLVEGQVVYADVDVETFMQDEMKLVVPPNHPLLRT 187 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + + LQ VL++ SG+R D + ++ ++ ++ V+AG+GI+ Sbjct: 188 NEMNESTLQDQVWVLRESGSGTRAYSDRFIHQHHLKMKRFFTFSSIQSVKEAVSAGLGIA 247 Query: 241 ILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 IL + L V+ + R +VR K S A + + V Sbjct: 248 ILSDWTVRKELLAKELFHVEVPNEQLIRPFSIVRGKYFIPSKAIQVFLNHV 298 >UniRef50_Q4KHB2 Transcriptional regulator, LysR family n=28 Tax=Proteobacteria RepID=Q4KHB2_PSEF5 Length = 308 Score = 278 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 78/292 (26%), Positives = 137/292 (46%), Gaps = 4/292 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M ++L+QL+VFV VAQ++S SRA + LSQSA S S+ ELE + +L DR + + L Sbjct: 1 MRFTLRQLQVFVAVAQQESVSRAAGLLSLSQSAASTSITELERQSSCQLFDRAGKRLSLN 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+QL + LLD+ G+ G + V A+ TI +L I + +P Sbjct: 61 ALGKQLLPQAVALLDQAKEIEDLLN--GKSGFGSLSVGATLTIGNYLATLLIGSFMQVHP 118 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + Q LH + +++ + ++D G++ D++ + + + + C LA Sbjct: 119 ESQVKLHVQNTAHIVQQVAHYEIDLGLIEGDCSHPDIEVQTWVEDELVVFCAPQHPLAKR 178 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + + L +L++ SG+R D A+ + NI E+ H + V +G+GI Sbjct: 179 GHATMEELTHEAWILREQGSGTRLTFDQAMRHHRSALNIRLELEHTEAIKRAVESGLGIG 238 Query: 241 ILPALALPLPEGSPLVVKRITPVVE--RQLMLVRRKNRSLSTAAEALWDVVR 290 + LAL +V TP ++ RQ + K + ++A ++ R Sbjct: 239 CISRLALRDAFRRGSLVPVETPGLDLARQFYFIWHKQKYQTSAMREFLELCR 290 >UniRef50_A5W7U4 Transcriptional regulator, LysR family n=17 Tax=Proteobacteria RepID=A5W7U4_PSEP1 Length = 308 Score = 278 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 78/292 (26%), Positives = 135/292 (46%), Gaps = 4/292 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M ++L+Q++VFV VAQ +S SRA + LSQSA S S+ ELE + +L DR + + L Sbjct: 1 MRFTLRQMQVFVAVAQHQSVSRAASLLALSQSAASTSITELERQSSCQLFDRAGKRLALN 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G QL + LLD+ G+ G + V A+ TI +L I + +P Sbjct: 61 ALGHQLLPQAVALLDQAKEIEDLLN--GKSGFGSLAVGATLTIGNYLATLLIGNYMQTHP 118 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + Q LH + +++ + ++D G++ DL+ + + + + C LA Sbjct: 119 ESQVKLHVQNTAHIVQQVAHYEIDLGLIEGDCNHPDLEVQPWVEDELVVFCAPQHPLAKL 178 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 ++L +L++ SG+R D A+ + NI E+ H + V +G+GI Sbjct: 179 GRADIESLSQEAWILREQGSGTRLTFDQAMRHHRANLNIRLELEHTEAIKRAVESGLGIG 238 Query: 241 ILPALALPLPEGSPLVVKRITPVVE--RQLMLVRRKNRSLSTAAEALWDVVR 290 + LAL +V TP ++ RQ + K + ++A ++ R Sbjct: 239 CISRLALRDAFRRGSLVPVETPELDLLRQFYFIWHKQKYQTSAMREFLELCR 290 >UniRef50_B8K739 Transcriptional regulator, substrate-binding of LysR family protein n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8K739_VIBPA Length = 297 Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 67/289 (23%), Positives = 134/289 (46%), Gaps = 4/289 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 LK+L F +A+ +F++A +++G++QSA+S S+K+LE G++L++RT R++ LT Sbjct: 1 MDLKRLHYFNQLAKTGNFTKAADQLGIAQSALSTSIKKLEQQLGLKLVNRTERQMSLTAE 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ L + +L+++ ++ + SG ++ A ++++ +P + + + YP I Sbjct: 61 GQVLLRHAKIILEDVEQAEKELQELKGLTSGVIKFGAPAMLASYFLPDALEQFKKAYPGI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 Q +H+ + + + G++D ++ ++ + + A Sbjct: 121 QINIHEAGTATLAQMLVNGELDLALIRGDREHEQIRQSLLAQDQIAACVPISHPFAKRSA 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI-SI 241 + LVL R +++ +N + + E P L MV +GI + Sbjct: 181 ITLDEFCQQPLVLFKNGYFLRETVNSYCQQNKLTPQVHFETNLPELLKSMVRRQVGIGTC 240 Query: 242 LPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 LP L PE L P + QL + + + LSTAA+A D ++ Sbjct: 241 LPILVADDPE---LKAIPFDPPIPLQLGIGWKSSHYLSTAAKAFVDFLQ 286 >UniRef50_B5JN19 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JN19_9BACT Length = 296 Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 2/286 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+Q++ F VA E+ F RA E++ ++Q A+S V++LE G +L +R R V LTDA Sbjct: 1 MELRQIRSFRVVAAEEHFRRAAEKLNIAQPALSLQVRQLEEELGTQLFERVGRGVRLTDA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G +R++ ++ + T + G++R+ +QT + P I+ RRYP + Sbjct: 61 GSLFWDYADRIVSLVDESAEATREHSDLIRGRLRIGIAQTPNCCFGPAVISAFKRRYPQV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + + S+ +G++D GI P +L E+I E F L R + Sbjct: 121 FVSLAELAADEIESSLLKGELDLGIGFGPCDSPNLSSESIYEERFVALAPRGHPWFNKKN 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + L +L+L +R + + + + E+ + + + S+L Sbjct: 181 ISLKTLAQEELILLTRDYCTRRIFEKTCDDLDVSLKVAIEMNTIEGIIASLESTGLASVL 240 Query: 243 PALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALW 286 PA + PL + V P + R++ LV RK+ LS AA A+ Sbjct: 241 PAQIVNSPLMSPTLRSVPIAQPGIRRKVALVYRKSGYLSPAAHAMA 286 >UniRef50_B5JQV8 LysR substrate binding domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQV8_9BACT Length = 300 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 74/295 (25%), Positives = 140/295 (47%), Gaps = 2/295 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L QL+ F+ VA+ +F+RA E+ +SQ ++S + +LE G +L +R R LT A Sbjct: 1 MELHQLRYFLAVAEAGNFTRAAEKCFVSQPSLSAQIIKLEGELGQKLFNRLGRRAELTRA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L R +L E+ + R + + G V+V + +++ +LIP I RYP++ Sbjct: 61 GTFLESRARTILMEVENAERQIKENEEDIRGIVKVGVTPSVTPYLIPPVIRMCRERYPNL 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + ++ +++ ++QG ++ I G ++ E IL E L + LA + Sbjct: 121 EINIQENLRRRLIDEVQQGHLEVAISSYTGDAANIDAEPILQEDLVLAVSKTHRLATQKS 180 Query: 183 -VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V + + LVL ++ + + I+ +V ++ MV G+G++I Sbjct: 181 KVSIEDFKDEPLVLLGESATLGDKVFDFFDKMNIEPKVVALCSQVRSVKEMVNLGLGVAI 240 Query: 242 LPALALPLPEGSPLVVK-RITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 LPA+A +V + ++ ++R L + R LS A D++R+ A Sbjct: 241 LPAMAKEEHLPFEIVYRSLVSERMKRLLFALTHSRRYLSPGARVFVDLIREVAYA 295 >UniRef50_D0J169 Transcriptional regulator, LysR family n=12 Tax=cellular organisms RepID=D0J169_COMTE Length = 310 Score = 277 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 139/308 (45%), Positives = 199/308 (64%), Gaps = 11/308 (3%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN SL+QL+ FV VAQ SFSRA + + L+Q AVS +V +LE G+ LL RTTREV LT Sbjct: 1 MNISLRQLRAFVAVAQSSSFSRAADALALTQPAVSRNVTDLEQALGLLLLHRTTREVELT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+ L L R+L++L++ L + + Q G+V+VA+S T+SA+L+PQCIA ++ P Sbjct: 61 EAGRLLLGNLSRVLEDLDACLLEVQGLATQRKGRVKVASSPTLSANLLPQCIARGRQQSP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + L DR Q V+ S+R G+VDFG+VIDP DL + IL+EPF L+C +LA + Sbjct: 121 GVNIQLLDRIQSDVLLSVRSGEVDFGVVIDPSEKQDLHAQTILTEPFCLVCLSSHSLARK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V W+ L G LVL D+ASGSR LIDAAL +G A++VQE+GH AT++ MV G+G+S Sbjct: 181 KEVHWEQLAGESLVLLDHASGSRRLIDAALQAHGAAASVVQEVGHTATIYSMVQQGLGLS 240 Query: 241 ILPALALP-----------LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 ++P LA+P + LV + + P V+R +MLV+R+ R LS A +WD++ Sbjct: 241 VVPRLAIPSAWAAQTATTAAAGSAALVSRPLVPKVQRSIMLVKRQQRELSPVAHLVWDLI 300 Query: 290 RDQGNALM 297 + L+ Sbjct: 301 AAEAVGLL 308 >UniRef50_A4G228 Transcriptional regulatory protein, LysR family n=18 Tax=Betaproteobacteria RepID=A4G228_HERAR Length = 367 Score = 277 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 79/298 (26%), Positives = 136/298 (45%), Gaps = 3/298 (1%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N +L+QLKVF TVA+ SFSRA E + L+Q AVS VK+LE+H G+ L ++ +++ LT Sbjct: 47 NATLRQLKVFETVARLLSFSRAAEELHLTQPAVSTQVKKLEDHAGLALFEQLGKKIYLTP 106 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 G +L ++ + + GK+ VA + + P+ + E R + Sbjct: 107 GGTELLHYSRTIIQQFQEAEDAMTQFKGITGGKLNVAVI-SAGDYFFPRLLVEFARSHQG 165 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + L ++ ++ + D I++ P D E P+ ++ D L + Sbjct: 166 VTLNLSVHNREGLLNQLANNLTDLAIMVRPPTDMDTINEPFAPHPYVIVAAPDHHLVSKK 225 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 +P L V+++ S + ++ NI EI T+ V AG+GIS Sbjct: 226 NIPMSTLIHEPFVVREKGSDTWHSMEDGFGSRIDDLNIAMEIKSTETIKQAVIAGMGISF 285 Query: 242 LPA--LALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALM 297 L A +++ L GS V+ V +V RKN+ L A+A + + ++G L+ Sbjct: 286 LSAHTISMELQAGSLTVLDVEGFPVMLNWYVVHRKNKRLPPVAQAFRNFLLNEGPELI 343 >UniRef50_UPI00004DBCAD UPI00004DBCAD related cluster n=2 Tax=Xenopus (Silurana) tropicalis RepID=UPI00004DBCAD Length = 312 Score = 277 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 106/303 (34%), Positives = 158/303 (52%), Gaps = 1/303 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 ++ SL+QL+ FV VA SF +A R+G SQ A+S +++ E G RL DR TR V +T Sbjct: 1 IDLSLQQLEAFVQVAAAGSFRQAALRLGQSQPALSRFIRQAEQTLGARLFDRDTRHVSIT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 DAG++L +R+L + + L D G SG++ VAA + S L+PQ +A R + Sbjct: 61 DAGKELLPIAQRVLRDFDDALGDFGEFMAGHSGRIVVAALPSTSIALLPQALAAFSRTHS 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + F L + P + ++ + +G DFGI + P P LQ + +PF L+C RD LA Sbjct: 121 QVTFALTEAPAEVLLALVEEGRADFGISVRPAPRQRLQYRHLFDDPFVLVCRRDDPLAAR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + VPW A ++ S RP+ DA R + + V E A+ +VAAG+GI+ Sbjct: 181 ESVPWSAFSTRPCIVAGSRSSIRPVTDAVFLRQRMPVHPVLEYPSVASCGALVAAGVGIT 240 Query: 241 ILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 LP LAL L LV + P++ R + +V R RSLS ++A + Q L Sbjct: 241 ALPMLALELLNMVELVALPLQRPLMSRPIGIVTRIGRSLSPVSKAFMASLTQQTCVLQGK 300 Query: 300 REG 302 G Sbjct: 301 AAG 303 >UniRef50_C8WUA0 Transcriptional regulator, LysR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WUA0_ALIAD Length = 298 Score = 277 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 74/291 (25%), Positives = 128/291 (43%), Gaps = 3/291 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ L+QL+ FV VA+E F RA +R+GL+Q +S +++LE+ GV L DRT R V LT Sbjct: 1 MDTELRQLEYFVAVAEELHFGRAAKRLGLTQPPLSQQIQKLEDEIGVTLFDRTNRRVQLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG+ L ++L + + ++ G++ VA + + +P+ I R+P Sbjct: 61 HAGRVLLEEARKVLAHVQTAVKAARDAAAGRVGRLSVAFVGSATYGWLPEVIRAYQERHP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 D++ VL + ME++ G++D G++ P DL + + + + LA Sbjct: 121 DVELVLREMSTPAQMEALTAGELDVGVLRLPAQHPDLHVRLVERDDCVAVVPSEHPLATR 180 Query: 181 DYVPWQALQGAKLVLQDYA--SGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 + L VL A G G + + E+ T +VAAG+G Sbjct: 181 SSLFLVELAEEPFVLVSRAIWPGLYDGFITLARALGFEPRVRLEVTEVQTAVGLVAAGLG 240 Query: 239 ISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 +SI+P+ + + +L + R+ R S A + Sbjct: 241 VSIVPSATERVHRRDVRYLHIDGQSPTVELGVAWRR-RDTSPLVAAFLAMA 290 >UniRef50_Q97DV9 Transcriptional regulator, LysR family n=1 Tax=Clostridium acetobutylicum RepID=Q97DV9_CLOAB Length = 312 Score = 277 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 69/289 (23%), Positives = 142/289 (49%), Gaps = 1/289 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +Q + T+A+EKS SRA ER+ +SQ ++S + LEN GV+L DRT+ + LT A Sbjct: 1 MDFRQFEYVKTIAEEKSISRAAERLYISQPSLSQYIIRLENSLGVKLFDRTSATITLTFA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G++ +++ N ++ + G+V + +++P I + ++ YP+I Sbjct: 61 GEKYIETARNIINLNNQLTKELNDIANLSKGRVIIGVPSQAGRYILPLVIPKFYKEYPNI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSAL-AVED 181 + ++ + + + + +G +D I+ P + E+I++E FL+ + + +V+ Sbjct: 121 EIIVEENIVSELEKMLLEGKIDIAILTLPVQHEKITYESIMNERIFLIAPKKHPICSVDG 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + + ++ K +L R ++D +R G + NI+ EI + + M ++G+G +I Sbjct: 181 RISFNFIRNEKFILLKKGQRIRLIVDDIFSRIGAKPNIILEITNLDAAYRMASSGMGFTI 240 Query: 242 LPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 +P L L + I +E L++ RK L+ A+ ++ Sbjct: 241 VPENVLYLLNTNGKENDFIIDSLEHTLVVAYRKGEYLTRASREFIANLK 289 >UniRef50_C9KJX6 Transcriptional regulator, LysR family n=2 Tax=Veillonellaceae RepID=C9KJX6_9FIRM Length = 302 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 73/289 (25%), Positives = 132/289 (45%), Gaps = 2/289 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ F ++ ++ +RA ER+ +SQ ++ ++K+LE G++L DR+ +++ LT Sbjct: 1 MELRQLEYFQMASRLRNITRAAERLRVSQPNITVAIKKLEAELGIQLFDRSQKQLALTPE 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G R+E L + + + Q G +++ + A+L P+ + RRY + Sbjct: 61 GAVFLNRVELALRNIQDAVLEVNDYKQLQKGTIKIGVPPMMGAYLFPRIFSSFQRRYSHL 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 +H+ + E + ++DFGI+I G LQ + S LA + Sbjct: 121 DIFMHEEASMSIREQLEHDELDFGIIILSGASNRLQLLPMSKNQIVCCVPASSPLAKKKA 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + K+V+ S R I + GI NIV E TL +VA G+GI+ Sbjct: 181 ISMNDVADTKIVMLKEGSFLRQTILGRMKDEGITPNIVLESNQINTLKGLVANGVGITF- 239 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 L + E L + + + L +K+R +S AA++ D +D Sbjct: 240 -RLDMVADEMPGLKTLPLADPIFVDVGLAWKKDRYISKAAQSFIDFCKD 287 >UniRef50_C6DBU7 Transcriptional regulator, LysR family n=4 Tax=Pectobacterium RepID=C6DBU7_PECCP Length = 299 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 77/300 (25%), Positives = 133/300 (44%), Gaps = 3/300 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN S+KQL+ F+ + + +F+RA ++I LSQ A S + LE G RL DR TR+V L Sbjct: 1 MNLSIKQLRAFIALTETDNFTRAAQKINLSQPAFSSLIAGLEEEVGYRLFDRDTRKVQLN 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G RL+ + + + GK+ +A +++ +PQ +A+ HR YP Sbjct: 61 ADGLHFIDIARRLVQTHDDAVGEIKSYATGYKGKIVLAVLPSMAVEWLPQVLAQYHRAYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ L D ++++ G D + G + ++ F+L+C LA Sbjct: 121 KIKVELLDTQWDRCLKAVLDGRADLALTAGQPSPGTFSSRMLFADSFYLICQNSHPLAQR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 D V + V + R D + G N V E+ T+ +VAA G+S Sbjct: 181 DSVDVTDVAQYPFVGFCKGTSIRQYTDQLIEPEGF--NYVLEVRQLTTMMGLVAANYGVS 238 Query: 241 ILPALALPLPEGSPLVVKRITP-VVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 I+ L L + + + ++R + LV + R LS A+ +D + ++ + + Sbjct: 239 IVTGLTLFQFQHKDIAIIPFRDLSLQRGIYLVTDRERQLSVCAKEFYDFLLERAESFVPA 298 >UniRef50_A8RPQ8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RPQ8_9CLOT Length = 296 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 65/295 (22%), Positives = 136/295 (46%), Gaps = 4/295 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + + LK+FVTV + S + A ++ ++Q ++S ++ E+E++ GV+L DR +R++ LT+ Sbjct: 1 MTFRHLKIFVTVCETGSMTAAASQLFIAQPSISLAISEMEDYYGVKLFDRISRKLYLTEN 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G++ ++D L+ + + G+++V S TI +L+P I + ++YP + Sbjct: 61 GRRALQYARHIIDLLDEMEQGVRDVDAM--GRLKVGTSITIGTYLLPGYIKKLKQQYPAL 118 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + I D+D GI+ + E+ + +C A + Sbjct: 119 KVEASIANSGTIEQQILDNDIDVGIIEGVAHSPFILSESFAGDRLVFICPAGHEFAGKTL 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 ++ +L++ S R + D LA + + + + V AG+GISIL Sbjct: 179 EELSEVRNQDFILREKGSAGREIFDGILAAQELNVRPIWQSASNQVILQGVKAGLGISIL 238 Query: 243 PALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 P + + EG + + R+ ++ KN+ L +A L ++ ++ A Sbjct: 239 PYFLVRQDIREGELAEFRIKDLALNRKYSVIYHKNKFLPRSARTLMELCKEGNGA 293 >UniRef50_Q9F1R2 HTH-type transcriptional activator cmpR n=38 Tax=Bacteria RepID=CMPR_SYNE7 Length = 323 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 71/299 (23%), Positives = 132/299 (44%), Gaps = 3/299 (1%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N +L QLKVF A+ SF+RA E + L+Q VS VK+L G+ L ++ + + LT+ Sbjct: 3 NLTLHQLKVFEAAARHSSFTRAAEELYLTQPTVSIQVKQLTKAVGLPLFEQIGKRLYLTE 62 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 AG+QL ++ ++L + G++R+A T + + IP+ I +RYP Sbjct: 63 AGRQLYKTTRQVFEQLEQLDMTIADLQGMKQGQLRLAVITT-AKYFIPRLIGPFCQRYPG 121 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 I L + ++ I D ++ P D+ + L P ++ LA + Sbjct: 122 INVSLKVTNHEGLINRINDNLDDLYVLSRPPSGFDITVQPFLDNPLVVVGPASHPLANQR 181 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + + L +L++ SG+R + A + + N+ ++G + + G+G+++ Sbjct: 182 GISLERLAQEPFILRERGSGTREATEQLFAAHNLNLNVKLDLGSNEAIKQAILGGLGLAV 241 Query: 242 LPALALPLPEGSP--LVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 L L +P + + + RQ V + LST A D + + + A Sbjct: 242 LSYHTLTSAGATPELKMFEVEGFPIHRQWHAVYPAGKQLSTVAATFLDYLLTESQRIAA 300 >UniRef50_Q6ANM2 Related to transcriptional regulator n=3 Tax=Desulfobulbaceae RepID=Q6ANM2_DESPS Length = 329 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 77/293 (26%), Positives = 140/293 (47%), Gaps = 4/293 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ +L+QL++F+ VA+ ++A +++ ++QSAVS ++ ELEN G L DR R ++L Sbjct: 5 MSITLRQLEIFIAVAETAQVTKASKKLFVTQSAVSMALAELENQLGGSLFDRHGRSLLLN 64 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ L + + ++++ L G + V AS T+ +++P I R +P Sbjct: 65 ARGRYLLPLAKEISGQISNIEVIMSEKNDTLEGHIEVVASTTLGNYILPYLIGAFKRVHP 124 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGP-VGDLQCEAILSEPFFLLCHRDSALAV 179 +Q + + E +R G +D G V P DL + +LC + LA Sbjct: 125 KVQVNMLVYNTRQAKELVRAGKMDVGYVEGPVQATEDLHVRPWFEDELVVLCGPNDPLAN 184 Query: 180 EDYVPWQ-ALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 L GAK ++++ SG+ + + ++ ++V E+GHP + V +G+G Sbjct: 185 NTAFDVDTDLAGAKWIVREPGSGTAAYFEKKMGKHFENVSVVMELGHPEAIKRAVESGVG 244 Query: 239 ISILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 IS L AL + G +K ++RQL +V+RK+ ++ A Sbjct: 245 ISCLSALCICREKENGWLKSLKIEGVDMKRQLRVVQRKDVVMTDALAEFISFC 297 >UniRef50_C0CUF5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUF5_9CLOT Length = 302 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 71/296 (23%), Positives = 139/296 (46%), Gaps = 4/296 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ +L+ L++F+TV + S + A R+ +Q +VS +++E+E + GV+L DR ++++ LT Sbjct: 1 MDVTLRHLRIFLTVCEAGSMTGAANRLFTAQPSVSLAIREMEEYYGVKLFDRISKKLFLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG Q+ ++ + ++ +SG +RV AS T+ L+P + E R YP Sbjct: 61 EAGHQVLEYARHIIALFDEMEQEVR--NPDMSGTLRVGASITVGTFLLPGYVKELTRLYP 118 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +++ + + + ++D G++ + E+ + +C A + Sbjct: 119 ELRVEARIENSNNIEKCVLSNEIDLGVIEGIAHSRYISSESFHGDRLAFVCPPGHRFAGK 178 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V LQ +L++ S R + D A + + I + + VAAG G+S Sbjct: 179 QDVKLGDLQSESFILREKGSAGREIFDGLAAAHELDIRIAWQSTSNQAIIHGVAAGFGLS 238 Query: 241 ILPAL--ALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 +LPA A + GS +ER+ ++ KN+ L+ A L + ++ G Sbjct: 239 VLPASLAAEGVERGSIAEFSVEGLSMERKFCVIYHKNKFLARGARELIRLFKEGGE 294 >UniRef50_Q0AZ61 Transcriptional regulator, LysR family n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZ61_SYNWW Length = 295 Score = 276 bits (706), Expect = 9e-73, Method: Composition-based stats. Identities = 69/297 (23%), Positives = 134/297 (45%), Gaps = 7/297 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L K +V V + K+ S+ E GLSQ AV+ ++ LE++ GV LL+R R + T Sbjct: 1 MNLNL--FKTYVRVVETKNLSKTAEEFGLSQPAVTKQIQSLEDYYGVLLLERAGRRLKPT 58 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+ L ++ L T + + G + + AS +++P I + +P Sbjct: 59 EAGETLYQYAREIIKLLEKTDNIMETVVESKKGILYLGASTIPGQYILPDYIKKFSDSFP 118 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I L + + + + + ++D G+V ++ L + L+ + L Sbjct: 119 YINISLDIGDTEKIFKKVAERELDIGLVGGWLSNRKVEGFQWLQDELLLIVPENHHLMGR 178 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQ---ANIVQEIGHPATLFPMVAAGI 237 D V + L K + ++ SG+R + L +GI+ ++ E G + V +G+ Sbjct: 179 DEVRIEELLHEKWIFREKGSGTRKAAEELLNNHGIKKEDLHVGMEAGSTEAVLASVESGM 238 Query: 238 GISILPALALPLPEGSPLV--VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 GISI+ A+ + + +K P R ++ + +S A E+ D ++++ Sbjct: 239 GISIVSNWAIKKADPHRRIRSLKIDDPGATRFFYIIYPRQKSRRKAVESFLDFIKEE 295 >UniRef50_C6D0V7 Transcriptional regulator, LysR family n=4 Tax=Bacillales RepID=C6D0V7_PAESJ Length = 299 Score = 276 bits (706), Expect = 9e-73, Method: Composition-based stats. Identities = 78/294 (26%), Positives = 141/294 (47%), Gaps = 4/294 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L QL+ F+TVA+ + + A + ++QS++S +++ LE GV L DR R++ L ++ Sbjct: 5 MELLQLQYFLTVARLEHVTEAARHLHVTQSSLSKTIQRLEEDLGVLLFDRVGRKLRLNES 64 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G + LR ER L EL+ ++ G + +A + A ++P + E ++ P+I Sbjct: 65 GSRFLLRAERALFELDQGKQELNDWSSPEQGTIELAVNT---ASMLPNILREFRKKKPNI 121 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 QF + Q ++ + +GD+DF + P D++C+ + + L LA Sbjct: 122 QFHVQMLTTQEMVAHLHRGDIDFCLSSPPLEGEDIECQIMYRDAILLAVPESHRLAGRSS 181 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V L+ V G+R L+D+ + G + V E PA + +V A IGI+ + Sbjct: 182 VSLPELKEEWFVGVKKGYGTRDLVDSICKKAGFEPKFVYEGDEPARINALVEAEIGIAFI 241 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 P A G ++ + R++ L+ K+R +S AA++ VV + L Sbjct: 242 PGTARN-SNGQIAYLEIDNNELVREIALLWHKSRYVSRAAQSFRKVVVNYFETL 294 >UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRM1_ACIBL Length = 302 Score = 276 bits (706), Expect = 9e-73, Method: Composition-based stats. Identities = 71/294 (24%), Positives = 141/294 (47%), Gaps = 5/294 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M++ QL F+ VA+ +FSRAGE++ SQSAVS +++LE G RL DR+ + V L+ Sbjct: 1 MDFD--QLLTFLEVAKLGNFSRAGEKVYRSQSAVSAQIRQLEQEYGERLFDRSGKIVRLS 58 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG+ L +R++ N +LR G+ G + + A++ +++P E +++P Sbjct: 59 PAGEVLLEYAQRMVALRNESLRAVADQGETPRGVLSIGANEATCLYVLPDIFTEYCQQFP 118 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +Q ++ + +++++ G +D GI P L+ I + L+ LA + Sbjct: 119 QVQITVYRNFSRKILQAVEDGVIDLGIATLPVKSPSLKVHPIFRDRLELMVPVRHPLAAK 178 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + V + + + +R +D + + EI + V +G+G++ Sbjct: 179 ESVTIEEIAEYPQIFPKTGY-TRQQLDKLFRPYNSKLRVAMEIPSVGLIKSFVVSGVGVT 237 Query: 241 ILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 +L + + G ++ + R+L L+ R +R+L +A A D++R + Sbjct: 238 LLSSTFAQDEVRAGKAKMLPIAGVDMWRELGLIYRNDRTLPRSATAFIDLMRHR 291 >UniRef50_B0MH18 Putative uncharacterized protein n=4 Tax=Bacteria RepID=B0MH18_9FIRM Length = 304 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 69/294 (23%), Positives = 125/294 (42%), Gaps = 1/294 (0%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 + +LKQL FV +A+ ++F+ A + + QSA+S ++K +E V+L+DRT + LT Sbjct: 9 SMNLKQLTYFVALAKNQNFTTAANELFICQSALSKTIKAMEEDLDVQLVDRTAKRFCLTP 68 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 G+ L L+ +N+ + +G++ V IS I + YP Sbjct: 69 EGRMLYQEGRDALESINNQMEHLRDCINAENGEISVGIPPVISTIYFASIIQGFRKAYPG 128 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 I+ V+ + V E ++ G++D G+VI P D + L D A + Sbjct: 129 IRLVIAEEGANTVKEKVQSGEIDIGVVILPFASDDFHILPVFKSDNVLTVSTDHPFAGRE 188 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 ++ L+ + + D +G + NIV E + MV+ G++I Sbjct: 189 KAAFRELRNEEFISLDKTFMLHSRTRELCHMSGFEPNIVMESSQWDFVAEMVSLNQGVAI 248 Query: 242 LPALALPLPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 LP L + + + P + L+ RK++ +S V++ GN Sbjct: 249 LPRPILSRFNSDKIKILTLTEPEFPWDIALIIRKDKYVSNPIRHFQTYVKEHGN 302 >UniRef50_C3X7G6 Transcriptional regulator n=2 Tax=Oxalobacter formigenes RepID=C3X7G6_OXAFO Length = 291 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 71/291 (24%), Positives = 143/291 (49%), Gaps = 4/291 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++QL+ F +A+E SRA +R+ ++Q +S+ +K LE GV+L+DR TR + LT A Sbjct: 1 MDIRQLRYFCAIAEEGQISRAAQRLHIAQPPLSYQLKLLEEELGVKLIDRNTRSLSLTKA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G R E++L + + + ++G + + + I IP+ I H+ YP + Sbjct: 61 GLAFYQRAEQILGLMKVAAIEARDVEYGVNGVLTIGSPPAIGNIYIPERIKRFHQEYPHV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSA-LAVED 181 +F + ++E + ++FGI P P+G + + +L+E + + D +D Sbjct: 121 RFQWREGNTYRILELLNADMIEFGIARLPVPMGSYESKPLLTESWMAVSRNDDPKWIGKD 180 Query: 182 YVPWQALQGAKLVLQDYASGS--RPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 + + L+G L+L +G ++ + G+ A++ E + + + +V A +GI Sbjct: 181 NIGLEELEGIPLILMQRQAGIHCHDMVIDEMKNKGVNADVFCESDNISAILSLVEAELGI 240 Query: 240 SILPALALPL-PEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 +ILP L + P G + ++ ++ +K++ LS AA+ ++ Sbjct: 241 AILPVSTLSVRPSGDFHAMAIANCQLQSSSAILWKKDKPLSAAAKLFLEMF 291 >UniRef50_A1VNR0 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A1VNR0_POLNA Length = 305 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 71/297 (23%), Positives = 134/297 (45%), Gaps = 3/297 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 Y+LKQ++ FV VA+++S S+A ER+ ++Q AVS +++LE+ G+ L++ R + LT A Sbjct: 6 YTLKQMQTFVEVARQRSVSKAAERLFVTQPAVSMQIRQLEDAFGLPLIEPLGRNIQLTHA 65 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L + G++ +A T + + +P + + +P I Sbjct: 66 GEAFLGHAIAALGQFKDLEALMAEHVGMKKGRIDLAVVST-AKYFVPMLLVRFRKLHPGI 124 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L ++ ++ + + + D ++ D + + P ++ D AL Sbjct: 125 DIQLRIDNRENILGMMARYEADLVVMGRAPGNLDCEATPFATNPLSIVAAPDHALVRRKT 184 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 +P+ AL V+++ SG+R ++ A N+V E+ T+ V AG+G+S L Sbjct: 185 LPFSALGEHGFVVREQGSGTRAAMERLFADQKTPLNVVMEMPSNETIKQAVMAGMGLSFL 244 Query: 243 PALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALM 297 + L G +V + + + LS AA A + + +QG ALM Sbjct: 245 SRRTMRHELAHGYIALVDIEGTPLVGNWYITHLSQKKLSPAALAFKEFLVEQGGALM 301 >UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHG4_MOOTA Length = 302 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 87/298 (29%), Positives = 148/298 (49%), Gaps = 9/298 (3%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN + L F+T ++ + S A E + L+Q AVS ++ LE++ G+RLL+R REV LT Sbjct: 1 MNIN--HLITFITTVEKGTLSAAAEELHLTQPAVSKQLQALEDYFGLRLLERRGREVRLT 58 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG+ + LN T R+ + Q + G++ + AS T +++P+ I R YP Sbjct: 59 AAGEICYRHARIIASHLNQTRRELAELTQLVRGRLLLGASTTPGQYILPRLIGAFRREYP 118 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDF-GIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 ++ +L Q V++ +++G++D + G +L + + L+ LA Sbjct: 119 RVEVILTIADTQEVVQRLQEGEIDLGVVGAAGGRGKNLSYSRLAGDELVLIVPPGHRLAG 178 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQAN---IVQEIGHPATLFPMVAAG 236 + L+ LV ++ SG+R +++ LA G + IV E+G + V AG Sbjct: 179 ATAISPGELKEEPLVWRESGSGTRRVVEERLAAAGFTVDPEQIVMELGSTEAIVSAVEAG 238 Query: 237 IGISILPALALP--LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 +GIS++ + A+ + G VV ++R L LVRR+ LS AAEA + D Sbjct: 239 LGISLVTSWAVEKSVKLGRLAVVTLQGVDLKRDLYLVRRRQ-PLSPAAEAFVNFAADH 295 >UniRef50_A4F7Y9 Transcriptional regulator, LysR family n=3 Tax=Actinobacteria (class) RepID=A4F7Y9_SACEN Length = 333 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 66/290 (22%), Positives = 126/290 (43%), Gaps = 4/290 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ FV +A+E+S +RA R+ ++Q +S +++LE G L+ RT R LTDA Sbjct: 1 MELRHLRYFVAIAEEQSLTRAAARLHIAQPPLSAQLRKLETELGAVLVHRTARGTQLTDA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L R+L E++ + T G G++ + + S ++P + + RYP++ Sbjct: 61 GRVLLEEARRILHEVDHAAQMTREAGSGRVGRLSLGFIPSASNVVLPPILRQFKARYPEV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L + ++E + +D G P L ++ + L LA Sbjct: 121 RLRLREMRPDEIVERLHDRRIDAGFFYLPIDDPSLHVRSVADDSLVLALPSTHPLADSPE 180 Query: 183 VPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQ-EIGHPATLFPMVAAGIGI 239 V +A+ G +L G + A R G +VQ ++ T+ +VA G+GI Sbjct: 181 VDLRAVAGEPFILPPRYDMPGLYTSVTQACERAGFTPRVVQPDVWLMQTIVGLVAGGMGI 240 Query: 240 SILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 +++P+ +P V ++ + R+ + + D+ Sbjct: 241 AVVPSSVQQIPRAGATFVPLTDVSATARMAMAWRREIG-TPVLRSFLDIA 289 >UniRef50_Q1IHL3 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IHL3_ACIBL Length = 306 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 3/291 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ FV VA+E F RA R+ L+Q +S +K+LE G L RT+R V LT A Sbjct: 5 IELRHLRYFVAVAEELHFGRAAARLHLAQPPLSQQIKKLEEILGYALFTRTSRAVKLTSA 64 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ R +R L + + + +G+ G +RV + ++P R YP + Sbjct: 65 GEVFLERAQRTLRHVREDMEEVRSIGRGEVGYLRVGFIGSSMLTVLPAIFGRYRRAYPKV 124 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + V+E + + +D GI+ D GP L E + SEPF + LA + Sbjct: 125 NLQLQESYTSGVVEGLLKATLDAGILRDGGPTHGLTVERLYSEPFVAVLPGKHPLAKQRA 184 Query: 183 VPWQALQGAKLVLQDYASG--SRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + +AL+ V S + + +G + +VQE T+ +V AG+G+S Sbjct: 185 LSPRALKDEPFVFYPPYSSKLAYEKPVSICEAHGFRPKVVQEAPQWLTILRLVGAGLGVS 244 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 I PA + + + V + L R+ A ++VRD Sbjct: 245 IAPACVERIAAPDVVCIPLRGAAVRSDIELAFREGEGR-EIVRAFAEIVRD 294 >UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67SW7_SYMTH Length = 305 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 76/288 (26%), Positives = 134/288 (46%), Gaps = 4/288 (1%) Query: 8 LKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLA 67 L+ F +A+ SF+RA ER+ L+Q +V+ ++ LE G +L +R R V LTDAG+ L Sbjct: 6 LEAFWWIAKTGSFNRAAERLFLTQPSVTARIQALEKELGQQLFERRPRGVRLTDAGRALL 65 Query: 68 LRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLH 127 ER+L ++ + + G + V ++ T SA+L+P + R YP+++ ++H Sbjct: 66 PHAERVLQDIKRARQAVLDLQTASGGTLSVGSALTTSAYLLPDILLRFKRGYPNVEVLVH 125 Query: 128 DRPQQWVMESIRQGDVDFGIVIDPGP-VGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQ 186 V + + V G+V P P ++ + EP L+ D +A V Sbjct: 126 TGRSHQVQQLVLDDTVQVGLVHAPLPSHAEIVSYPLSEEPILLVVPPDHPVARHSEVTLD 185 Query: 187 ALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALA 246 L + D ASG L++ A G +I E+ MV G+G+++LP Sbjct: 186 ELTQESFITTDRASGYWALVEQWWASQGFVPHITMELDSIEAAKRMVLCGLGLTMLPYST 245 Query: 247 L--PLPEGSPLVVKRITPV-VERQLMLVRRKNRSLSTAAEALWDVVRD 291 + + + V ++RQ +L+ R+ + S A+A V+ + Sbjct: 246 VKSEIELSQVVAVPLANSATLKRQNILIHRRGKIWSGTAKAFLRVLEE 293 >UniRef50_B4CXF3 Transcriptional regulator, LysR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXF3_9BACT Length = 309 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 74/278 (26%), Positives = 137/278 (49%), Gaps = 1/278 (0%) Query: 13 TVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLALRLER 72 VA+ +F+RA E+ +SQ ++S +++LE G RL DR R+ LT G+ R R Sbjct: 26 AVARAGNFTRAAEQCRVSQPSLSQQIQKLEEELGERLFDRMKRQTKLTSYGEAFVRRAVR 85 Query: 73 LLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLHDRPQQ 132 +L+E LR+ LSG + + TI+ +L+P+ I+ R+YP ++ V+ + Sbjct: 86 ILEEAEMALREATDAKSLLSGMLTIGVLPTIAPYLLPEAISAFARKYPGVEVVVQEDTTG 145 Query: 133 WVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQALQGAK 192 +++ + ++DF I +P + + + +E L LA + VP AL+G + Sbjct: 146 HLLKHLTTYEIDFAIASNPIEDSRFEIQELFAEELLLALPAGHPLARKRTVPASALKGER 205 Query: 193 LVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALALPLPEG 252 L++ + ++ + T++ +VAAG+G+S++PA+A Sbjct: 206 LIVMREGHCLGDQVLGFCEHREMKPTVSFRSAQLETIYALVAAGLGLSLIPAMAAATERA 265 Query: 253 SPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVV 289 + L ++ I P ER+++ V K R L AA D++ Sbjct: 266 NALELRSIQAPRPERKILAVWPKQRPLGRAARVFLDLM 303 >UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillaceae RepID=C0Z518_BREBN Length = 295 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 71/285 (24%), Positives = 124/285 (43%), Gaps = 6/285 (2%) Query: 8 LKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLA 67 L F VA+ SF+RA E +G +Q V+ +++LE G L +R R++ LT AG+ L Sbjct: 6 LHTFREVARYGSFTRAAEELGYAQPTVTAQMQKLEQSYGAPLFERYGRKLRLTQAGEALL 65 Query: 68 LRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLH 127 L+ + Q +G + + T++A +P + ++YP + VL Sbjct: 66 PYARELIRLYGESKEVI---KHQTTGPIAIGTIDTLAAFFLPPYLQAFCQQYPQVDLVLR 122 Query: 128 DRPQQWVMESIRQGDVDFGIVID-PGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQ 186 + +++ IR G +DFGI+ D P +L I E ++ + Sbjct: 123 TAGEAEIVQQIRDGYLDFGIIFDRPCTDPELVTHVIREEELVVVMPPAHRFTTATALTVH 182 Query: 187 ALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALA 246 L G LVL + R ++ A G+ I + +P + V G+G+++LP +A Sbjct: 183 DLGGEPLVLTEEGCTYRGMLLEAFGEAGMTQRIACQFSNPEAIKQCVRCGLGVALLPVMA 242 Query: 247 L--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 + L EG + + + LV K + LS + L D + Sbjct: 243 VQRELAEGVLTAIPFQSDKPPFSIQLVYHKKKWLSPSMVTLVDTI 287 >UniRef50_B9KUK0 Transcriptional regulator n=2 Tax=Rhodobacteraceae RepID=B9KUK0_RHOSK Length = 300 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 76/296 (25%), Positives = 139/296 (46%), Gaps = 1/296 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +N+ L L+ F+ + SF +A E + +SQ A++ ++ E G +L +R+TR V LT Sbjct: 3 INFELLDLRTFLAIIDLGSFRKAAEALNISQPALTRRMQAFEYKLGNQLFERSTRNVSLT 62 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 + G+++ R L E++ G SG + +A T + +P I +P Sbjct: 63 NVGREIEPMARRTLAEIDEQFGSLSDAGATRSGFISIACIPTSTLSFLPSVIGRFQTDFP 122 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +F + D V++S+ G DFG+ + A+ + F LC +A + Sbjct: 123 RARFRILDNSSAQVLDSVFDGTADFGLTFTGQSDSQFKFTALFEDEFVALCAPGDPIAQK 182 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W L L+ + +SG+R L+D L+++GI+ N E+ H +V +G+S Sbjct: 183 ARIAWSELNTLPLIGVNRSSGNRTLMDTRLSKDGIKLNWAHEVNHVIAAVGLVRQAVGVS 242 Query: 241 ILPALAL-PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 ++P +A P G ++ + PVV R+L ++ R A D+++ G A Sbjct: 243 VVPRMAYDPRLMGDLRIIPLVNPVVSRRLGILERSGARQGRLVTAFLDLLKTFGGA 298 >UniRef50_A4J4H0 Transcriptional regulator n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J4H0_DESRM Length = 303 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 61/295 (20%), Positives = 144/295 (48%), Gaps = 5/295 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L KVF +AQ ++ ++A + + LSQ ++H++ LE H G +L DR+ +++ LT Sbjct: 1 MNLSHFKVFKILAQTENITKASKLLELSQPTINHNIYLLEQHYGAKLFDRSNKKLKLTRF 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L + ++L+ + + + + +L G + + AS TI+ +++P+ + + YP++ Sbjct: 61 GEVLVKYVNQILNLVEQSEQHIHELVGELRGSLNLGASHTIAENVLPKIMGMFNHDYPEV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + +++ I +D G++ P ++ + + + ++ + LA++ Sbjct: 121 TIHLEVTNTRHIVDHILDNKLDLGLIEGPVTHDNIISKPFMEDELLVVLPYNHPLAIKKN 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQA---NIVQEIGHPATLFPMVAAGIGI 239 + + + VL++ SG+R ++++ L G+ N V E+G+ + V AG+G Sbjct: 181 LTIKEVANLPFVLREEGSGTRVVMESTLKGAGLDPSDLNTVMELGNTQAVIGAVEAGLGA 240 Query: 240 SILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 +IL LA+ + + + + R ++ K + S+ + + + Sbjct: 241 TILSGLAVSKEIQLKTVKTCRISNVNIVRNFSIIINKEKPSSSIIQTFLGFINSE 295 >UniRef50_C9RA29 Transcriptional regulator, LysR family n=1 Tax=Ammonifex degensii KC4 RepID=C9RA29_AMMDK Length = 295 Score = 274 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 77/295 (26%), Positives = 133/295 (45%), Gaps = 5/295 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L LK FV +A + SFS A + + L+Q AVS + LE H GV+L+DR R+V LT+A Sbjct: 1 MKLSWLKTFVLIADKGSFSLAAKELDLTQPAVSKHIALLEAHLGVKLIDRDQRQVTLTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ L ++ L + + + G + + AS +++PQ I RYP + Sbjct: 61 GQALLPYARTIIKTLEEAEQAVRNLSASVRGTLNIGASTIPGHYVLPQLIRRFRERYPQV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 Q L + V + + + + G V P L+ ++ L+ LA ++ Sbjct: 121 QVNLEIADTEKVWQQVLEHKICLGAVGAPPSSPALEAVPFATDEIVLVLPTPHPLAGKEV 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQA---NIVQEIGHPATLFPMVAAGIGI 239 +P + L +LV ++ SG+R ++ L + G +V E + V AG+G Sbjct: 181 IPLELLPQLELVGREKGSGTRQTVEERLRQKGFPPERLRVVAEFSTTEAVLAAVEAGLGG 240 Query: 240 SILPALALP--LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 + + A +G+ + + ER+L LV ++R+L A + +Q Sbjct: 241 AFVSRWAAESRRHKGNLCICRLEGISFERKLYLVYSRHRTLPHLARLFLNFATNQ 295 >UniRef50_C5BDD2 HTH-type transcriptional regulator AlsR n=2 Tax=Edwardsiella RepID=C5BDD2_EDWI9 Length = 330 Score = 274 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 79/304 (25%), Positives = 134/304 (44%), Gaps = 8/304 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M ++ LK F+ VA+E+ F+RA ER+ +SQ +S ++ LE G LL RT R V LT Sbjct: 18 MRIEIRHLKYFIAVAEERHFNRAAERLNISQPPLSQQIQSLERELGACLLMRTNRSVSLT 77 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQC---IAESHR 117 AG ++ +L R + +G + + + ++ IP+ + Sbjct: 78 QAGSLFLKECYSIVGQLEQAAEKAARAHRGETGDLTIGFTSSV--PFIPRVAHSLFSYRH 135 Query: 118 RYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSAL 177 RYP + + + + +E + G +D GI+ + G L+ + EP + HR L Sbjct: 136 RYPQVHLQMRELNTKQQIEPLVDGKLDIGILRNTLLPGVLKHRVLQREPLVAVLHRHHPL 195 Query: 178 AVE-DYVPWQALQGAKLVLQDYASGS--RPLIDAALARNGIQANIVQEIGHPATLFPMVA 234 A + + L V G+ + + L R GI I QE+G T+ +++ Sbjct: 196 AQRGQALRFSDLADQPFVFFSRGDGTALYDELLSLLKRAGIVPYITQEVGEAMTIVGLIS 255 Query: 235 AGIGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 AG+G+SILPA + P ++ L + R LS A AL ++ + Sbjct: 256 AGLGVSILPASYTRIQVDGVCYRALDEPDAYTEVWLAYHRQRPLSAQATALIALLTAPSS 315 Query: 295 ALMA 298 L+A Sbjct: 316 NLIA 319 >UniRef50_A7ZAS3 YybE n=1 Tax=Bacillus amyloliquefaciens FZB42 RepID=A7ZAS3_BACA2 Length = 296 Score = 274 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 67/292 (22%), Positives = 134/292 (45%), Gaps = 1/292 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 Q+ F TVAQ + ++A +++ +SQ A+S S+ +LE+ GV+L DR R + L Sbjct: 1 MDWHQINYFQTVAQVQHITQAAKQLSISQPALSRSISKLEDELGVQLFDRKGRNIYLNRY 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ R+E+ + ++ ++ SG + ++ ++ ++P I+ YP + Sbjct: 61 GKMFLHRVEQSIRQIEIGKQEVWNEIHPNSGTILLSFLPSLGMSMVPDVISSFQHMYPHV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 F L Q ++E + +VD + D+ C+ +L+E +L + LA D Sbjct: 121 NFQLTQASNQQIIEQLTSREVDIALTSLRDENDDVICQPLLTEELYLAVSAEHPLASYDE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + + + + +I + G ++V E T +V A +G+S++ Sbjct: 181 IDLKMAEHEPFISFKDTNVLHGMIKELCEKAGFSPDVVFEGEDIVTASGLVGAKLGVSLI 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 P L + + ++ P+ ER++ L RK+ LS AAE ++ + N Sbjct: 241 PDLHV-FDKTKVKLLSVTNPICEREIGLAWRKDGYLSPAAENFIAFIQTRLN 291 >UniRef50_B8FI63 Transcriptional regulator, LysR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FI63_DESAA Length = 304 Score = 274 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 78/300 (26%), Positives = 134/300 (44%), Gaps = 5/300 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L QL +F V + SFS+A + + LSQ VS +K+LE+H RL+DR R+ T Sbjct: 1 MDLWQLHIFTKVVELGSFSKAAQAVNLSQPTVSSHIKDLEDHLNCRLIDRLGRKASPTKG 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L RLL + + +G + +A S +++P+ I + YPD+ Sbjct: 61 GELLYSFATRLLALRDEAQSAMSSFLGKPTGSLAIAGSNIPGCYVLPKVIGAFSKYYPDV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + V E + G V+ G+V P L + ++ + L+ LA ++ Sbjct: 121 SISLKIGDTRSVSEDVIAGTVEMGVVGALSPNKQLTQDKLMDDHLTLIVPASHPLAEKEA 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGI---QANIVQEIGHPATLFPMVAAGIGI 239 V +++ A ++++ SG+R + LA GI NI ++G + + AG+G+ Sbjct: 181 VSIKSIADAPFIIREQGSGTRKFFEKVLADAGIGLDSLNISGQLGSTEAVREAIKAGLGV 240 Query: 240 SILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALM 297 SI A+ L GS ++ R LVR + R+ S + D + + L Sbjct: 241 SIFSTRAVLGDLRCGSLKSIEISDLDFRRSFYLVRHRQRTASPLCQYFCDFLTANAHDLA 300 >UniRef50_B7RV59 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RV59_9GAMM Length = 292 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 90/283 (31%), Positives = 151/283 (53%), Gaps = 10/283 (3%) Query: 8 LKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLA 67 ++ FV VA+ SF+RA + + SQ AV+ S+K+LE++ G++L +RTTR+V T AG++ Sbjct: 1 MRAFVVVARHGSFNRAADELSRSQPAVTLSIKQLESYVGLKLFERTTRKVTPTTAGEKFI 60 Query: 68 LRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLH 127 ERLL E + + D SG V ++ +++ ++P I+E ++PDI + Sbjct: 61 PVAERLLREFDMAIYDVTATADCRSGHVSMSVLPSVATRILPDVISEFTEKFPDISIHVS 120 Query: 128 DRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY-VPWQ 186 D Q V S+ + +VDFGI P L+ ++ + F L+CH+D LA E V W+ Sbjct: 121 DYNAQGVQRSVERNEVDFGIGSLWHPNSKLEFRPLMEDRFELVCHKDHPLAAEGAPVTWE 180 Query: 187 ALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALA 246 L+G + + AL N E TLF M+ A +G+++LP LA Sbjct: 181 QLKGLSFLSTG--------LTQALKMQRYIGNPKFEFTTTNTLFAMLKANVGVTVLPTLA 232 Query: 247 LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 +P E + + PV R++ ++ R++ +LS AA A+ +V+ Sbjct: 233 MPQ-EDDLRSLPMVDPVETREICVILRQDWTLSPAANAMMEVL 274 >UniRef50_Q2BJH5 LysR-family transcriptional regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJH5_9GAMM Length = 312 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 82/298 (27%), Positives = 150/298 (50%), Gaps = 4/298 (1%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N S++ L+ FV +A SF+RA E + L+QS ++ ++K+LE+ ++LLDRTTR V+LT Sbjct: 4 NISIRHLRAFVEIASCGSFTRAAENLHLTQSTLTATIKQLEDQACLKLLDRTTRRVLLTG 63 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 G+ E+L+ + ++ D Q G++ VAAS ++ + ++P I H P Sbjct: 64 EGETFLPVAEKLISDFDTAFNDLHATATQQQGQIGVAASPSMISRVLPPIIKAYHLDSPK 123 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 I L D + + + + +VDFG+ + +L +L + + ++ LA + Sbjct: 124 IGIYLRDDNASGIEQRVLENEVDFGLGGNHSNQPELSYTPVLKDRYGVVVPSGHHLAEKA 183 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANI---VQEIGHPATLFPMVAAGIG 238 + W + + +G+R + N + + E+ PA L ++ G+G Sbjct: 184 IIRWDEISSLPQLHLTEDTGTRSQLRKLEKENDLDLQLQGAGIEVSTPAGLAELIKTGLG 243 Query: 239 ISILPALALPLPEGSPL-VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 IS+LP+LA L + P + R++ ++ RK RSLS AAE+L ++ + +A Sbjct: 244 ISLLPSLAASTRSFDELHFIPLDEPALFREICIISRKGRSLSPAAESLLQMINEHFSA 301 >UniRef50_Q3SFM8 Transcriptional regulator n=3 Tax=Proteobacteria RepID=Q3SFM8_THIDA Length = 313 Score = 273 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 78/293 (26%), Positives = 129/293 (44%), Gaps = 2/293 (0%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 + +QL++F +A+ SF+RA E + L+Q VS +K+L + G L++ + + LT G Sbjct: 6 TFRQLEIFEAIARLGSFTRASEELYLTQPTVSMQMKKLSENVGAPLIEHIGKRIHLTADG 65 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 QQLA + L+ GK+ + A T +++ P+ + E + YP I Sbjct: 66 QQLAQATREIFAILDRFTMSVAERRGLKQGKLSLMAITT-ASYFAPRLLGEFAKLYPGID 124 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 L ++ V+ SI D + P D+ I+ P +L D LA + Sbjct: 125 VSLRVTNKEQVLASIADNLDDLYFLGQPPEDIDVIATPIMDNPIVVLAAPDHPLAHTRKI 184 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 P + L ++++ SG+R I+ A +GI + E+G + + AG+GIS L Sbjct: 185 PLEQLAKESWLMREKGSGTRNAIERRFAESGIAVHPRLELGSNEAIKQAILAGLGISALS 244 Query: 244 ALALPLPEGSPLVVKRITP-VVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 AL L + V + + R V R LS AA A D + G Sbjct: 245 RHALALNQPDQFAVLDVDGFPILRHWYAVYPAGRQLSVAARAFLDYLLGDGKD 297 >UniRef50_A1WRQ7 Transcriptional regulator, LysR family n=2 Tax=Burkholderiales RepID=A1WRQ7_VEREI Length = 299 Score = 273 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 84/296 (28%), Positives = 130/296 (43%), Gaps = 2/296 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +LKQL+VF + + +SF+ A ++QSAVS ELE+ G L +R+TR V Sbjct: 1 MNITLKQLRVFCALYELRSFTAAARAAFVTQSAVSKLCAELESEVGQPLFERSTRSVTPC 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 + +++L + + R + G V VAAS + L+ +A HR YP Sbjct: 61 EGAADFYTYAQQILSTVRAAERSMSSLRSLERGIVGVAASPMVMYGLLGDPLASYHRNYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ L++ + +R G VD GIV +L I + + +C D LA E Sbjct: 121 GIKLDLYELSTDETITYVRHGKVDMGIVSLEVKDAELATRPIFRDFMYAVCTSDHPLAQE 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + V W L + A R ID + + + E ++ MV +G+GI+ Sbjct: 181 EKVSWSELAKYDHIGLHSAYNVRRSIDRICEQLHLDIHFKIEASMVTSVLGMVRSGLGIT 240 Query: 241 ILPALALPLPEGSPLVVKRI--TPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 ++P LV+ I P +L LV+R S AA AL + V Q Sbjct: 241 VVPGYICDFARHLGLVLVEIRGAPKYPVELWLVQRTATRPSLAASALLECVEQQLE 296 >UniRef50_C4V4C8 Transcriptional regulator n=2 Tax=Selenomonas RepID=C4V4C8_9FIRM Length = 298 Score = 273 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 74/289 (25%), Positives = 137/289 (47%), Gaps = 2/289 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ F ++ K+ +RA ER+ +SQ ++ ++K+LE+ G++L DR+ +++ LT Sbjct: 1 MELRQLEYFQMASRLKNITRAAERLRVSQPNITVAIKKLESELGIQLFDRSQKQLSLTPE 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G R+E L + + + Q G +++ + A+L P+ + RRY + Sbjct: 61 GAVFLERVEVALRNIQDAVLEVNDYKQLQKGTIKIGIPPMMGAYLFPKIFSSFQRRYSHL 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 LH+ + E + + ++DFGI+I P +LQ + DS LA Sbjct: 121 DVYLHEEGSVAIREQLERDELDFGIIIIPESSPNLQLLPMTRSQIVCCVPEDSELAERKA 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V Q ++G L++ S R + + G+ NIV E T+ +VA+G+G + L Sbjct: 181 VTLQDIEGRNLIMLKEGSFLRQTMLQKMKAAGVSPNIVLESNQVVTIMGLVASGVGDAFL 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 + E + + V + L +++R +S AA++ D RD Sbjct: 241 LDMIA--REAHGIRTLPLAAPVYVDVGLAWKRDRYISRAAQSFIDFARD 287 >UniRef50_A6SW66 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SW66_JANMA Length = 289 Score = 273 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 80/290 (27%), Positives = 133/290 (45%), Gaps = 2/290 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ F+ AQ +SF+RA E + ++Q +SH +K++E+ G++L DR R V LT A Sbjct: 1 MELRHLRYFLAAAQSQSFTRASESLHITQPTLSHQIKQIEDELGIQLFDRVGRVVKLTTA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + +R L E+++ L + G+V + +P +A+ ++ YP I Sbjct: 61 GELFQVYAKRALLEVDAGLDALNELENLKHGRVTFGVLSSFGTFHLPPILADFNKVYPGI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + E + GD+ FG+ P + E + + P L+ L Sbjct: 121 KITVLRLRSGEIEERLLDGDLHFGVAYAPSSTEQINVEPLFTVPLALVVGDHHPLVGSAG 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L +LV+ SR ++DA L NGI IV E+ + V +IL Sbjct: 181 ITLNELNEHELVMLSDEYNSRKMMDAILLANGITPRIVMEMNAIEPILATVRHSSLATIL 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 A + G L +TP V + L R+N LS AA AL D +R + Sbjct: 241 SANLVDEMPG--LHQVPLTPTVTHTVGLFTRRNSHLSAAARALVDTIRQR 288 >UniRef50_C8T378 LysR family transcriptional regulator n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8T378_KLEPR Length = 321 Score = 273 bits (699), Expect = 5e-72, Method: Composition-based stats. Identities = 96/292 (32%), Positives = 144/292 (49%), Gaps = 1/292 (0%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N+ L F + + SF A E I LSQSA+S +++LE G RL DRTTR V LT Sbjct: 26 NFDFNDLYAFRALMEYGSFRLAAESICLSQSALSRRIEKLETALGNRLFDRTTRRVTLTL 85 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 GQ A R E+LL + + L D ++ + +G V VA + + + +P+ I RYP Sbjct: 86 YGQNFAERSEQLLAHVETVLADISQVSKARTGLVTVATVPSAAYYFMPEIIRSFQARYPQ 145 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 ++ L D V+E++ G DFG+ ++ + + + C D LA + Sbjct: 146 VRIRLIDSSVGNVIEAVSSGQADFGLCFAKNLPASIEFTPLADDRYVAACRHDHPLARKT 205 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 ++ WQA + D SG+R L+D LA + E H T+ MV AGIGI+ Sbjct: 206 HLSWQAYFEQDYIGLDRVSGNRTLLDRELAHLTPARPSICETRHVTTMLGMVEAGIGIAA 265 Query: 242 LPALALPLPEGSPL-VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 +PA+++P E S L V PVV R + L+R R S A L ++ +Q Sbjct: 266 VPAMSMPAGEHSVLRAVPLTDPVVTRTVGLIRLSGRIQSYVAAELEKLIIEQ 317 >UniRef50_A4WZV0 Transcriptional regulator, LysR family n=1 Tax=Rhodobacter sphaeroides ATCC 17025 RepID=A4WZV0_RHOS5 Length = 302 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 75/302 (24%), Positives = 137/302 (45%), Gaps = 3/302 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M +L+QL+VF +VA+ S++RA E + L+Q AV VK+LE V L++R + + LT Sbjct: 1 MRCTLRQLQVFASVARHASYTRAAEELHLTQPAVFAQVKQLEEALAVVLIERIGKRLHLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+ + L+ + + G++++A T+ + +P+ + E P Sbjct: 61 EAGRAVEATARETLEGIERLEMQLADLQGLRRGRLKIAIVSTV-QYFLPRLLGEFCTLNP 119 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ L +Q V+ + + D I+ P D+ + P LL D LA Sbjct: 120 GIEVALTVTNRQTVIARLAANEDDLCILGQPPEGLDVVATPVAQNPILLLAPADHPLAGA 179 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 VP+ L A +L++ SG+R + A G++ + E+G + VAAG+G++ Sbjct: 180 RAVPFAELAEAPFILREPGSGTRAAAERFFADCGVRPRVRMELGSNEAIKEAVAAGLGLA 239 Query: 241 ILPA--LALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 IL +A+ + + + R + + + LS AA A + + +A Sbjct: 240 ILSQDTMAVEAATRRLVALDVQGFPLMRVWNVAYPRGKHLSVAAAAFLAHLTQGAPSQIA 299 Query: 299 GR 300 Sbjct: 300 SH 301 >UniRef50_A6VUM5 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=A6VUM5_MARMS Length = 306 Score = 273 bits (699), Expect = 7e-72, Method: Composition-based stats. Identities = 71/297 (23%), Positives = 125/297 (42%), Gaps = 1/297 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN S+KQL+ F+ ++ SF++A +R LSQ A S + LE+ G RL DR TR+V L Sbjct: 1 MNLSIKQLRAFLALSDHDSFTQAAKRFNLSQPAFSTLIASLEDEIGYRLFDRDTRKVELN 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G RL+ + + + + +G + ++ +++ +P+ +A+ +P Sbjct: 61 ANGIHFIEIARRLILDYDEAINEIEARASGKNGTLTLSVLPSLAVEWLPEILAQYSTMHP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 Q L+D ++SI D + + S+ F+LLCH + LA Sbjct: 121 QTQIKLNDTQWNQCLKSIVNSQADLALTASQPATNIFDSHYLFSDKFYLLCHVNHPLAQN 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V L + + R D G E+ T+ +++A GI Sbjct: 181 KKVKLSDLYKYPFIGFSQRTSIRQYTDKLFESQGKLIKYSLEVQQLTTMMGLISANYGIG 240 Query: 241 ILPALALPLPEGSPLVVKRITPV-VERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 I L L + + + V +ER + LV KNR+ + + D + ++ N Sbjct: 241 ITSGLTLFQFKHQNIAIVPFEDVDLERDIYLVSLKNRAQPSHVKLFADFIMNEANKF 297 >UniRef50_A6F002 Transcriptional regulator, LysR family protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F002_9ALTE Length = 299 Score = 273 bits (699), Expect = 7e-72, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 140/298 (46%), Gaps = 1/298 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L L+ F +VA+++SFSRA E I +SQ AVS +V+ELE G+ LL+R +V LT+A Sbjct: 1 MNLHLLRTFASVAEQRSFSRAAEAIHISQPAVSRAVRELEEQLGMALLERRGGQVRLTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G +L + S + D G + + AS+TI + +P IAE R++P I Sbjct: 61 GAELYQHARAIFALEQSAMADLRGRQGLERGSLTIGASRTIGTYFLPPVIAEFLRQFPAI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + + ++D + ++ + +L H D L Sbjct: 121 DVRIISENTELIQRRLLAYELDIAFIEGSVEDSRVEEVFWHEDELVILAHSDHPLLNRKS 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L + VL++ SG+R + A L + G++ + E+G L VAAG+G++++ Sbjct: 181 LKASDLDAERWVLREQGSGTRSVTLALLKQAGVKVDRTIEVGGNGALVQSVAAGLGLAMV 240 Query: 243 PALALPLPEGSPLV-VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 ++A V V +R L +R +N+ S AA+AL V + + G Sbjct: 241 SSVAAREHLSVGKVNVLNFPDRFKRPLHRIRLRNKPESPAAQALVAVADRVASTFLPG 298 >UniRef50_B8G0Z2 Transcriptional regulator, LysR family n=4 Tax=Firmicutes RepID=B8G0Z2_DESHD Length = 303 Score = 272 bits (698), Expect = 8e-72, Method: Composition-based stats. Identities = 71/283 (25%), Positives = 138/283 (48%), Gaps = 4/283 (1%) Query: 8 LKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLA 67 L++F VA+EKSFS+A E + LSQ AVS ++ LEN G +L+ R+++ V LT AG+ L Sbjct: 6 LEIFRKVAEEKSFSKAAEDLFLSQPAVSSHIRNLENEFGTKLIYRSSKHVDLTPAGEILY 65 Query: 68 LRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLH 127 + R++++ ++ +SG +R+ AS TI +++P+ ++++ RRYP++ + Sbjct: 66 EQACRIINQYQEAKEKINQIQSIVSGNLRIGASFTIGEYILPELVSQTARRYPNLNINVT 125 Query: 128 DRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQA 187 + + + +RQ +D +V + E + + L+ LA V Q Sbjct: 126 IGNTEEIAQGLRQNRLDVALVEGKITGKEFILEPFMVDEMVLIALPSHPLAKIKGVTAQD 185 Query: 188 LQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALAL 247 L+ +L++ SG+R D + I + V +G+GI+++ L + Sbjct: 186 LEDQVWILRETGSGTREFSDRFIETLKIPVKHSYGFSSNTGVKAAVLSGLGIALVSKLII 245 Query: 248 --PLPEGSPLVVKRIT--PVVERQLMLVRRKNRSLSTAAEALW 286 + G ++ P + R+ ++ R + + A+EA Sbjct: 246 QKEIKAGEIAIIPLEENLPRLSREFLIARGQQTYFTKASEAFL 288 >UniRef50_A3ZYQ6 Transcriptional regulator, LysR family protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZYQ6_9PLAN Length = 293 Score = 272 bits (698), Expect = 8e-72, Method: Composition-based stats. Identities = 71/289 (24%), Positives = 133/289 (46%), Gaps = 2/289 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L L +F VA+ S S E++ +SQ A S +++ E G +L DRT R + LT Sbjct: 1 MNLHHLAIFHEVAETGSVSLGAEQLMISQPAASKQLRDFETALGEKLFDRTGRGLRLTTV 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L ++ R + G++ + AS TI+ +L+PQ +A H+++P+I Sbjct: 61 GKLLNEYARKIFTLEAEAERVVALVRDVRRGELFLGASTTIAGYLLPQVLARFHQQHPEI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + +V + VD G+ L + + ++ L + Sbjct: 121 RVHVSVGNTDFVHRQVLDYRVDLGLTEGFVNEPGLTATSFAEDELVVVAAATHPLVKKRR 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V L G VL++ SG+R + + A++ G++ V + + +VAAG+G++I+ Sbjct: 181 VKADDLSGQSFVLRESGSGTRAVQEQAISMCGVEVREVMTLSSTEAIKHVVAAGVGLAIV 240 Query: 243 PALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 L++ L G ++ + R L LV+ ++R S AA A + + Sbjct: 241 SRLSVGAELVSGELCAIRLADLQIPRPLHLVQAQDRFASPAARAFHEAL 289 >UniRef50_C1A9Z7 LysR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9Z7_GEMAT Length = 296 Score = 272 bits (698), Expect = 8e-72, Method: Composition-based stats. Identities = 80/295 (27%), Positives = 134/295 (45%), Gaps = 3/295 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ +L L+ F+ VA +FSRA RIG++Q ++S ++ LE G L +R R V LT Sbjct: 1 MDITL--LRAFLEVADAGAFSRAARRIGIAQPSLSLQIQRLEQQLGTTLFERHGRGVALT 58 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 D G+ L R R++D++ + R + G + V A TI+ +++P + R+P Sbjct: 59 DVGKGLYPRARRIVDDVRAAEEAVRREVAEGFGSITVGAIPTIAPYVLPAALERLQHRHP 118 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + VL + +++ +R+G +D I P G L + + SE + A Sbjct: 119 GARVVLREDYSAVLVDLLREGAIDVAIAALPYDFGTLPQDVLGSEMLLVAVPALHPAARA 178 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + LQ A V D + + ++V T+F MV AG+G+S Sbjct: 179 GKITVAQLQDAPTVTLDPVHCLGEQVAGFCDARQVNPSVVCRSAQLTTVFEMVGAGMGLS 238 Query: 241 ILPALALPLPEGSPL-VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 I+P +A S VV +ER ++ + ++R+ S A D VR N Sbjct: 239 IVPQMAAAKHNTSRCAVVPLADMALERDIIALWPRDRAPSKVAMTFVDCVRQVVN 293 >UniRef50_Q0EX23 Transcriptional Regulator, LysR family protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EX23_9PROT Length = 303 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 73/289 (25%), Positives = 135/289 (46%), Gaps = 3/289 (1%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +L+QL++F VA+ SF+RA E I L+Q A+S VK LE G L ++ +++ LT AG Sbjct: 5 TLQQLRLFEAVARFGSFTRAAEAIHLTQPAISIQVKRLEETLGAPLFEQMGKKIYLTAAG 64 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 ++L + D L + + +++G + +AA T + + +P + RRYP + Sbjct: 65 KELYATCRHVFDSLGTFEGKLDELRGEVAGPLNLAAVTT-AKYFLPHYLGAFLRRYPKVL 123 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 L + + E + + D I+ D++ L + + H LA + + Sbjct: 124 PQLKVSNRARITERMEANEDDIYILATLPERIDIEVHPFLKDELVVFAHPKHPLANKKKI 183 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 P + L G +++ ++ SG R + LA G+ E+G + V +GIGI+ L Sbjct: 184 PPELLLGERIISREAGSGIRMTFERLLAERGVTLEPYMELGSGEAIKQAVMSGIGIATLS 243 Query: 244 ALA--LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 + L L G +V+ + R V R+ + L+ +A + ++ Sbjct: 244 TFSLKLELETGRLVVLDVEGMPIRRNWYAVHRRGKHLTPSALKFIEFLQ 292 >UniRef50_Q1LN85 Transcriptional regulator, LysR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LN85_RALME Length = 307 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 82/301 (27%), Positives = 134/301 (44%), Gaps = 3/301 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M + +QL+V VA+ S RA E + L+ AVS +KE E G+ L DR R + LT Sbjct: 1 MQITFRQLRVVSEVARYSSVIRAAEALHLTAPAVSLQIKEAERQVGLTLFDRAGRRMTLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ + RLL L R + SG++ + +++ +PQ +A+ H +P Sbjct: 61 TTGEYFLVYARRLLATLKDAEDMMARFKRLESGRLTIGMVG-AASYFLPQLLAKFHAEHP 119 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + L ++ + ++ DVD I+ P + E S P L+ A Sbjct: 120 AVDVRLRLASREKLGVMMQGNDVDLCIMGRPPQDPPTRAEPFASHPHVLVVSPQHRFARA 179 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + VP AL ++++ SG+R + L + IQ V E+ + V AG+G+S Sbjct: 180 EAVPAVALANEPFIVREPDSGTREALQKYLDAHRIQPTFVMEMPSNEAIKQAVMAGMGVS 239 Query: 241 ILP--ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 +L +AL G V +ER+ +V + LS AAEA V + G + +A Sbjct: 240 LLSLHTIALEWSNGLIAVPHVEGLPLERRWNVVNIAAKQLSPAAEAFRYFVLEHGESHLA 299 Query: 299 G 299 Sbjct: 300 A 300 >UniRef50_B2I0F8 Transcriptional regulator n=13 Tax=Acinetobacter RepID=B2I0F8_ACIBC Length = 293 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 73/288 (25%), Positives = 139/288 (48%), Gaps = 1/288 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +LKQLK F+ +A+ +++ A + LSQSA+S ++K LE G +L +R TR V LT Sbjct: 1 MTLKQLKAFLALARTLNYANASLELHLSQSALSLTIKSLEEELGGKLFNRNTRRVELTQE 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L ++LL + D + + G + +A+ ++ ++P+ I + +P++ Sbjct: 61 GKSLIPYAKKLLANWDEMENDVKQRFKLNRGTLSIASMPFVTHAILPEVIHQFLAVHPNL 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 F +HD P + ++E ++ G + GI +P L+ + + E F L + LA Sbjct: 121 NFSIHDIPNETIIEKVQDGIFELGICFEPDLTEGLEFKPLFEEDFLALLPKSHPLAQSSS 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + W L V S R L++ RN I ++ E ++L VA GIG+S + Sbjct: 181 ITWHELCSNPFVTLQKPSIVRYLVEQNCLRNNITLDLKVECHQISSLSSFVAYGIGVSAI 240 Query: 243 PA-LALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 P A + + +++ + + + +V +KN +S + + + Sbjct: 241 PRHFAKHIDKEHNVLIDLKDEAIHKTVGIVYKKNFEISNISAQFIEAL 288 >UniRef50_D2P368 Transcription activator of glutamate synthase operon GltC n=18 Tax=Listeria RepID=D2P368_LISMO Length = 295 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 72/291 (24%), Positives = 123/291 (42%), Gaps = 6/291 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QLK F+ VA+ + ++A E + ++QSAVS + +LE GV L DR R + LT Sbjct: 1 MELRQLKYFMEVARVEHMTKASENLHVAQSAVSRQITKLEEELGVHLFDRVGRNMQLTSV 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ + L+EL G VRV ++S ++P I+ +YP I Sbjct: 61 GQDFLKQAAIALNELQKAEALVTEYTDPAKGTVRVGLPNSLSTKVLPSVISTFREKYPQI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVID-PGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + + + + E + G +D + P ++ E L+ + LA Sbjct: 121 TYQFMEGTNEELTEMLLSGVLDMTFLSPVPESSEQIEAIRFFDEKLKLIVPKTHPLAENF 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V + L K VL ++ A + G + I + T+ +V AG+GISI Sbjct: 181 TVSLKELASEKFVLYPEDFDLYKIVTKAANKKGFEPQIAFQSRDFYTIQGLVGAGLGISI 240 Query: 242 LPALALP---LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 LP + L E + ++ + R + ++ K R+LS + + Sbjct: 241 LPEMILDGAIFKETKSIALRDKE--LRRSVGIITTKKRNLSPSENLFRSFI 289 >UniRef50_Q15VE5 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15VE5_PSEA6 Length = 297 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 75/296 (25%), Positives = 144/296 (48%), Gaps = 1/296 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN S +QL+ F+ VAQ +F+ A +++ LSQ A+S ++K++E G L RTTR+V L+ Sbjct: 1 MNVSYRQLQAFIQVAQSATFAEAAQKMFLSQPALSSAIKKMEEQVGGGLFSRTTRKVQLS 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 GQ RL+++ D ++ GK+ +AA + + +P + ++P Sbjct: 61 PEGQDFLPVAIRLMNDWQDAFGDLQQVFSMGRGKLSIAAMPSFAVGHLPAILGAFQSQFP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +++ + D + V+ ++ + V G + + L + ++ F + + L+ + Sbjct: 121 NVKVAVADIVMEQVINAVSEERVALGFTFETEQLDGLLFHPMFTDEFIAVLPKLHPLSQQ 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V W AL + + + S R +D ++ N+V E ATL V G+G+S Sbjct: 181 SSVTWNALAQSPFIAMNRGSAIRRWVDNHYEALELKVNMVAEASQLATLGQFVEHGLGVS 240 Query: 241 ILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 I+P L + L I + +++ ++++ ++S +A+ALWD V Q A Sbjct: 241 IVPGLCQQQMQRLGLRCLPIEGDRLSKRVGMIKKVQGNMSVSAQALWDWVIKQSLA 296 >UniRef50_Q1YUD1 Probable transcriptional regulator n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUD1_9GAMM Length = 297 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 88/295 (29%), Positives = 147/295 (49%), Gaps = 1/295 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ + Q+ VF TVA+ SF+ A ++ LSQ A+S ++K LE G +LL RTTR V LT Sbjct: 1 MSIPINQIVVFTTVARTGSFAEAAIQLYLSQPALSVAMKNLEQSLGGKLLARTTRSVTLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ RLL E +++D GK+ +AA T + + +P+ +AE H +YP Sbjct: 61 PEGKAFYPVARRLLSEWEQSMQDVRNHFALGRGKLDIAAMPTYTTNFLPKILAEFHSQYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +I +HD + V++ +R+ + GI P DL + + + F + L + Sbjct: 121 NIHITVHDVIAENVVQMVREERSELGITFAPEDAPDLHFQPLYQDRFVAILPFKHPLLEK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W L + +G+R LID AL G+ E ++ MV G+G+S Sbjct: 181 QTLKWIDLLAYPHLSLQRPAGTRKLIDQALQEKGLLLTPAFESHQLVSIGRMVNEGLGLS 240 Query: 241 ILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 ++P+ + E L + I+ PV+ Q+ +V R ++LS AA A+ ++R Sbjct: 241 VVPSTSRAQMEEMGLQCRAISAPVITHQVGIVTRPQQALSAAALAMQQLIRAAVG 295 >UniRef50_B1ZUQ0 Transcriptional regulator, LysR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUQ0_OPITP Length = 301 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 73/293 (24%), Positives = 130/293 (44%), Gaps = 2/293 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L QL+ V VA +F+RA ER ++Q ++S + LE G +L R R VLT+A Sbjct: 1 MELYQLRYAVAVADTGNFTRAAERCNVTQPSLSQQIINLEKEVGHKLFHRLGRRAVLTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G R +++ ++ + ++ ++ V A QT++ +L+ I R P++ Sbjct: 61 GAVFIERARQIVYDVENAAKELSDHPSLDR-RITVGAIQTVAPYLLLPMIEVCKRELPNL 119 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 Q L + + ++ + +GD+D IV P + E +++EP L+ ++ A Sbjct: 120 QINLIEDFRVDLVHGVVEGDLDLAIVTLPVDDPRVSVEPLMTEPLLLVVGKNHPFATRKE 179 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L V +S I + + Q + ATL +VA G+ ISIL Sbjct: 180 ISINDLADETFVTMGESSTLAAQIRSFFGGHNFQPKVGYRCAQVATLKTLVAMGLAISIL 239 Query: 243 PALALPLPEGSPLVVKRITP-VVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 P + + L R+T R+L++VR R S A+ ++ +Q Sbjct: 240 PRVDQEEKDRETLTYLRLTGSAPTRELVVVRHLQRYQSRGAQQFLQLLHEQVR 292 >UniRef50_B4WMZ4 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WMZ4_9SYNE Length = 289 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 66/275 (24%), Positives = 123/275 (44%), Gaps = 2/275 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L+QL F+ VA E F +A +R+ ++Q +S +K+LE+ V+L +RT R+V LT A Sbjct: 1 MNLRQLNYFLAVANELHFGQAAKRLNMAQPPLSMQIKQLESDLDVQLFERTQRKVSLTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L E++L+ + R T + + +G++ +A + ++P I+ + YP + Sbjct: 61 GEVLKKEAEQILERIEVARRKTQQADRGETGQMAIAFVSSAMYSILPPWISAFRQSYPQV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + +D G V P + + + EP + L+ Sbjct: 121 ALTFQEATGLEQISGLLSHQIDIGFVRPPIEDVSISDKVVWREPLVVALPEGHRLSTHKA 180 Query: 183 VPWQALQGAKLVL--QDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + +L+ +L + AS I + + NI Q T+ +VAA +GI+ Sbjct: 181 ISISSLEQEPFILIQRPLASEMYDKIISFCQQASFSPNITQTAQQLQTILGLVAANLGIA 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKN 275 ILP A L I +L+++ RK+ Sbjct: 241 ILPTAAQKLQRAGICYRPFIETTPAVELVMIWRKD 275 >UniRef50_Q13GE5 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GE5_BURXL Length = 303 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 89/299 (29%), Positives = 140/299 (46%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++L + F+ VA+ SF RA E SQSAVS V +LE+ GVRL RTTR+V LT Sbjct: 5 FNLNNVITFLAVAETLSFRRAAEHTHTSQSAVSARVSQLEDRLGVRLFHRTTRQVTLTAE 64 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G QL + ++++ + SG++ +AA +I ++P + E HRRYP + Sbjct: 65 GLQLFVVARTAVEDMERVAESLRKKAALQSGELTIAAVPSIGQTVLPTIMGEFHRRYPGV 124 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L D Q +E + G VD IV D D+ E + + FL+ R AL Sbjct: 125 TLKLLDVDSQRCIEMMEAGSVDLAIVSDLEDRHDIVFEPLFRDECFLVVPRTHALGERRS 184 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + L+ + +I+ A A G QE + +TL +V G G+ I+ Sbjct: 185 ISLREAASFPLMASPRGTTLWQIIERAFAACGATPVAHQETWNMSTLVRLVEEGFGMGIV 244 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGRE 301 P + L + S V + V R + + R NRS S ++A ++ ++ L A R+ Sbjct: 245 PEICLGKLDVSRCTVLSLEEHVGRMIGVARMTNRSESPGSKAFRQLLGERTPPLRAVRQ 303 >UniRef50_P77559 Uncharacterized HTH-type transcriptional regulator ynfL n=179 Tax=Gammaproteobacteria RepID=YNFL_ECOLI Length = 297 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 78/289 (26%), Positives = 128/289 (44%), Gaps = 3/289 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN L+ L+ FV VA+E F RA R+ +SQ +S ++ LE G RLL RT R V+LT Sbjct: 1 MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNRSVLLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTI-SAHLIPQCIAESHRRY 119 AG+Q ++L ++ R+ Q +G++R+ + + + ++ R Y Sbjct: 61 AAGKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSSAPFIRAVSDTLSLFRRDY 120 Query: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 PD+ + + + + +G +D G++ + L+ I+ EP + D LA Sbjct: 121 PDVHLQTREMNTREQIAPLIEGTLDMGLLRNTALPESLEHAVIVHEPLMAMIPHDHPLAN 180 Query: 180 EDYVPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGI 237 V L V D +G I + R + I QE+G T+ +V+AG+ Sbjct: 181 NPNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHLTPVITQEVGEAMTIIGLVSAGL 240 Query: 238 GISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALW 286 G+SILPA + V ++ LV K+ S AA Sbjct: 241 GVSILPASFKRVQLNEMRWVPIAEEDAVSEMWLVWPKHHEQSPAARNFR 289 >UniRef50_B4ETA7 LysR-family transciptional regulator n=37 Tax=Enterobacteriaceae RepID=B4ETA7_PROMH Length = 296 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 84/294 (28%), Positives = 146/294 (49%), Gaps = 6/294 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M +L+QL+VF V + S ++A +++ LSQSAVS S+ +LEN GV+L DR + +V Sbjct: 1 MRITLRQLEVFTEVLKSGSTTQASQQLALSQSAVSASLTDLENQLGVQLFDRVGKRLVTN 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 + G+ L R LL+ + ++ Q +G +R+AAS TI +++PQ + HR YP Sbjct: 61 EHGRLLYPRALSLLERA----TEVEQLFQAGNGALRIAASTTIGNYILPQMLGNFHRNYP 116 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 DI + + V++S+ + VD G++ +L + L + + C + LA Sbjct: 117 DIPLEMSIGNTEEVVKSVSEFRVDLGLIEGACQSSELISQKWLLDEMVIFCSPEHPLAKA 176 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V LQ A +L++ SG+R +++ L + I E+G+ + V +GIS Sbjct: 177 KTVTLADLQSAPWILRENGSGTRDVLNHLLFASLPGYRIEMELGNSEAIKHAVMYEMGIS 236 Query: 241 ILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 L + + GS +K ++R L LV + + +S A + L + Sbjct: 237 CLSRRVIQDQIESGSLKEIKVEGLKLQRTLYLVYHRQKHVSDALKKLLSYCNAE 290 >UniRef50_Q67KY5 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67KY5_SYMTH Length = 298 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 131/288 (45%), Gaps = 3/288 (1%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L L+V+ + + +SFS+A R +SQ AVS VK +E H RL++R+ + + T+AG+ Sbjct: 3 LSYLRVYCDIIETRSFSKAAARNFISQPAVSQQVKAMEEHFQQRLIERSPQGIYPTEAGR 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 +++ + + + Q +SG +RVA T+ H +P I + + YP + Sbjct: 63 IFYEAAREIVERYQALEQQMANLSQSVSGTIRVATVYTVGLHDLPPYIKKFIQTYPQARI 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE-DYV 183 L + E++RQ VD GIV P L + S+ ++ + LA V Sbjct: 123 HLEYSRTNKIYEAVRQNQVDIGIVAYPQEGRQLGVIPLPSDELVVIVSPNHPLARAGKPV 182 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 Q L + D +R D L +G+ I+ E + T+ V A +G+SI+P Sbjct: 183 ALQQLHRLPFIAFDPDIPTRKATDRVLNDHGVDVEIIHEFDNVETIKRSVEAELGVSIIP 242 Query: 244 ALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 + GS + + +ER + ++ ++ ++ S + ++ Sbjct: 243 RRCAQWEVRSGSLVALPIADMRIERPVGVIYKRGKNFSNTLQKFIAIL 290 >UniRef50_B9ZSB8 Transcriptional regulator, LysR family n=4 Tax=Bacteria RepID=B9ZSB8_9GAMM Length = 340 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 78/306 (25%), Positives = 131/306 (42%), Gaps = 11/306 (3%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +L+QL+VF + + SF+RA E + L+Q VS +K+L G+ L + R+ T+ G Sbjct: 30 TLRQLQVFEAIVRLGSFTRAAEELHLTQPTVSIQIKKLSTALGLPLFEYVGRKAFPTEVG 89 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 L +L L + M G++R+A T + + P + + RRYPDI+ Sbjct: 90 LLLYDTCREMLGALTNLEMKLAEMHGLKRGRLRLAVITT-AQYFAPSILGQFARRYPDIE 148 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVID-PGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L V+E + D D I+ P + D+ P ++ RD L Sbjct: 149 LSLEVSNFDRVLERLSNNDDDLYIIGHVPERLTDVAVHPFAPNPLVVMASRDHPLVGRRN 208 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 +P + L+ ++++ SG R +GI + E+G + V G+GI++L Sbjct: 209 IPLKELEQETFLMREPGSGIREATLKLFQEHGISPPVRMELGSNEAIKQAVIGGLGIAVL 268 Query: 243 P--ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDV-------VRDQG 293 L+ EG ++ + RQ +V K + LS A+ D VR Q Sbjct: 269 SLHTLSAEGAEGPVALLDVEHFPIHRQWHIVYPKKKVLSVVAQTFLDFAIQDEARVRAQV 328 Query: 294 NALMAG 299 L+A Sbjct: 329 EDLLAA 334 >UniRef50_C6D0W9 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D0W9_PAESJ Length = 296 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 64/288 (22%), Positives = 129/288 (44%), Gaps = 3/288 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++QL+ F + E F+RA +++G++Q +S+ +K+LE GV L R +++ LT+A Sbjct: 1 MEIRQLEYFQAICDELHFTRAADKLGITQPTMSYQIKQLEEELGVPLFHRIGKKIALTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L + ++ + + G + + L+ + + H +YP I Sbjct: 61 GFILLNHSRNIFRSIDGAREEISELHHMERGSLTIGTLIGEINDLVSGLLVDFHNKYPGI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + V++ + Q ++DF + I P ++ E F+ + H +S L+ E Sbjct: 121 SIKLLAL--EDVVDPLLQDELDFAVTIFPVDDDRFSKVSLYEEEFYFVAHSNSPLSGEPS 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V + +++ R LID + +G+ V E ++ +V +G G SIL Sbjct: 179 VTIEEAMKEPIIMFPKTHRCRQLIDTVCSMHGVAWEPVIETSAIKSILSLVQSGAGASIL 238 Query: 243 PALALPL-PEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 L L P+ + +++ P + R++ + K+R + A A + Sbjct: 239 SKTLLELYPDQNMIMIPISNPSLRREVGIAYLKDRYIGKATIAFMKQL 286 >UniRef50_Q1QWP3 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QWP3_CHRSD Length = 296 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 81/291 (27%), Positives = 137/291 (47%), Gaps = 1/291 (0%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 + + +QL+VFV V + + + A ++ LSQSA S ++ +LE GV L +R R + L D Sbjct: 4 HVTFRQLQVFVAVIRGGAVNAAARQLRLSQSATSQALADLERQLGVVLFERLGRRLELND 63 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 AG++L E++L+ L+ + +L G + VAAS TI +L+P R+P Sbjct: 64 AGRRLLPYAEKVLNGLDELVDAAREPDGELRGTLHVAASATIGTYLLPMLAGRFIERHPA 123 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + L R + VM I++ D D G++ L E + ++ LA D Sbjct: 124 VDLQLRLRNTEDVMRDIQRFDADLGLIEGQCSESRLVSELWCQDEMVVVAAPQHPLAARD 183 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + + LQ A+ +L++ SG+R + +AA+ + + + E+ + V AG G+ Sbjct: 184 GLGVEELQAAQWILREPGSGTRAIFEAAIHPHVERIRVRMELDQHEAIKQAVRAGFGLGC 243 Query: 242 LPALALPLP-EGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 L L++ E LV R + R LV R S +A +RD Sbjct: 244 LSRLSVAGELERGELVALRSPLQLTRSFSLVWHPERYRSPLWQAFKVFLRD 294 >UniRef50_B7X0F3 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X0F3_COMTE Length = 307 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 80/306 (26%), Positives = 136/306 (44%), Gaps = 3/306 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+VF V + +SF+ A + + ++QSAVS ELE+ G+ L +RTTR V Sbjct: 3 MNVTLRQLRVFCAVYERRSFTSAADDMHMTQSAVSKLCAELESEIGLPLFERTTRRVTPC 62 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 D +L + +L+ + R + G + +AAS + + L+ I R +P Sbjct: 63 DGAAELYEYAQEVLNTMRLAGRRLSALRTLDQGNLSIAASPMMMSGLLAPVIEAFARDHP 122 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ LH+ ++ +R G DFG+V L+ + + +E L C LA + Sbjct: 123 KVRIDLHELTTDESVDYVRTGRCDFGLVSIAEHDPQLEPKVVCAELLCLACTPSHPLAAK 182 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W + +R ID L G++ + G AT +V A +G++ Sbjct: 183 KRITWGEASDYPHITLRSVYSTRKTIDRILKAQGLELRSTIQAGTLATSLRLVKANLGVT 242 Query: 241 ILPALALPLPEGSPLVVKRITP--VVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 ++P+ A + L V I +L L+ R+ S AA A D ++ A Sbjct: 243 LIPSYAREFAQDLGLKVMEIYDKKPYPHELSLLTRRGLKPSIAATAFMDALQVHLQG-RA 301 Query: 299 GREGDP 304 R P Sbjct: 302 RRRQHP 307 >UniRef50_B1Y3F3 Transcriptional regulator, LysR family n=2 Tax=Burkholderiales RepID=B1Y3F3_LEPCP Length = 314 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 80/312 (25%), Positives = 144/312 (46%), Gaps = 15/312 (4%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 +++L+ L++F T+A SFSRA E++G+SQ AVS +++LE G L +R R+ LTD Sbjct: 3 DFNLRHLRIFETIASCGSFSRAAEQLGMSQPAVSMQLRQLETDLGTLLFERPQRQ-RLTD 61 Query: 62 AGQQLALRLERLLDELNSTLRDTG-----------RMGQQLSGKVRVAASQTISAHLIPQ 110 AGQ L +L ++ +T + G + + T + + P+ Sbjct: 62 AGQDLLQHARVILAQVRATEDAMAVHEAEASGASAAGARGPRGLLHLGVVST-AHYFAPR 120 Query: 111 CIAESHRRYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLL 170 ++E HRR+P+++ L + V+ +++ +D I P DL+ + P ++ Sbjct: 121 LLSEFHRRHPEVRLKLTVAKRSEVLAMLQEHRLDIAITGYPPSEADLEAASFARHPHCIV 180 Query: 171 CHRDSALAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLF 230 H ALA + W L+ + + ++ S +R ++ L IQ E+ T+ Sbjct: 181 AHPGHALARRRGLAWADLRDEEFIFREGGSATRQFLEHLLQSQSIQIKRGMELAGNETIK 240 Query: 231 PMVAAGIGISILPALALPLPEGSPLVVKRITPVVER--QLMLVRRKNRSLSTAAEALWDV 288 V G+GIS L A + G+ L+ + + V+R++ L+ A A Sbjct: 241 QAVMCGMGISFLSAHTFQVELGAGLMAVLDVQGMPKLIDWCFVQRRDTLLTGANAAFRQF 300 Query: 289 VRDQGNALMAGR 300 V ++G L A R Sbjct: 301 VFEEGATLAACR 312 >UniRef50_D0Z9H4 Transcriptional regulator, LysR family n=40 Tax=cellular organisms RepID=D0Z9H4_EDWTE Length = 302 Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats. Identities = 89/296 (30%), Positives = 143/296 (48%), Gaps = 1/296 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M S+KQL+ F+ VA +F++A R+ LSQ A+S +++ LE+ G L RTTR+V LT Sbjct: 1 MAMSIKQLRAFLAVAHTLNFAQASVRLNLSQPALSLAIRSLEDALGGALFVRTTRQVRLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ + +LL + ++T + GKV +AA + +A+ +P + RRY Sbjct: 61 PEGEAFFPLVRQLLVDWDNTTETIRQRFTLQVGKVAIAAMPSFAANPLPFILQRFRRRYA 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + V+HD + V E I +G V+ GI +P P L + F + A + Sbjct: 121 GVNVVVHDVINEAVYEMIAEGRVEMGIAFEPEPGARLHFTPLGMNRFIAIVPPGCPFARQ 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W+ L + S R L++ LA+NG Q + E T+ MVA G+G+S Sbjct: 181 QDIGWRQLLSLDFITLQRPSSMRLLLEQRLAQNGKQLPVAFESHQLITVGNMVANGLGVS 240 Query: 241 ILPALALPLPEGSPLV-VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 +PA V + I PV+E + LV + S AA+A+ D + + A Sbjct: 241 AVPAWCARQMRQLGAVCLPLIEPVIENRFGLVSLMHHPFSCAAQAMADTICEYAQA 296 >UniRef50_A1W6X9 Transcriptional regulator, LysR family n=19 Tax=Burkholderiales RepID=A1W6X9_ACISJ Length = 310 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 89/301 (29%), Positives = 147/301 (48%), Gaps = 11/301 (3%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN S +Q+ F+ +A +++F+RA + LSQ A S ++ LE+ G+RL DR+TR V LT Sbjct: 1 MNVSTRQIDAFLALAAQRNFTRAAAQCHLSQPAFSALIRALEDDLGLRLFDRSTRHVSLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ R+ E+++ L G+V VA +++A +P +A ++P Sbjct: 61 AEGENFHASALRIRAEVDAALATLRDAALLRRGRVSVALLPSLAAGWLPGVLAGFRAQHP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ + D + +E + G DF + +LQ E + F L+C D LA + Sbjct: 121 GVELDIADVLSEPCIERVATGKADFALAAIRADTPELQAEPFCEDGFHLVCRADHPLARQ 180 Query: 181 D--------YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPM 232 W+AL + S R ++AA + + E+ AT+ M Sbjct: 181 PLPAGRRSAAAQWRALAEWPFIHLARHSSVRQYLEAAFHPH--AMRTLMEVEQLATVMGM 238 Query: 233 VAAGIGISILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 V AG+GIS++P L L + L + + P + RQ+ LVRR++R LS AA+AL+ V Sbjct: 239 VRAGLGISVVPTLTLFHFQQEGLATRPLALPGLTRQIYLVRRRDRGLSVAAQALYARVMQ 298 Query: 292 Q 292 Q Sbjct: 299 Q 299 >UniRef50_Q04778 HTH-type transcriptional regulator alsR n=87 Tax=Bacillus RepID=ALSR_BACSU Length = 302 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 123/286 (43%), Gaps = 3/286 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ F+ VA+E F +A R+ ++Q +S +K+LE GV LL RT R V LT A Sbjct: 1 MELRHLQYFIAVAEELHFGKAARRLNMTQPPLSQQIKQLEEEVGVTLLKRTKRFVELTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L ++ + R + G + + + + +P + E +++P + Sbjct: 61 GEIFLNHCRMALMQIGQGIELAQRTARGEQGLLVIGFVGSATYEFLPPIVREYRKKFPSV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L + E + +G++D GI+ P L E S P L + L ++ Sbjct: 121 KIELREISSSRQQEELLKGNIDIGILHPPLQHTALHIETAQSSPCVLALPKQHPLTSKES 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLID--AALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + + L+ ++ + +D + G + NIVQE + +V+AGIG++ Sbjct: 181 ITIEDLRDEPIITVAKEAWPTLYMDFIQFCEQAGFRPNIVQEATEYQMVIGLVSAGIGMT 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALW 286 +P+ A L K + + ++ RK+ + + Sbjct: 241 FVPSSAKKLFNLDVTYRKMDQIQLNAEWVIAYRKDNH-NPLIKHFI 285 >UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Actinomycetales RepID=A4FE82_SACEN Length = 294 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 82/293 (27%), Positives = 134/293 (45%), Gaps = 4/293 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ FV VA+E F+RA +R+ ++QS +S S++ LE G RL RTTR V LT A Sbjct: 1 MELRQLEYFVAVAEECHFTRAAKRLHVAQSGLSASIRSLERELGARLFHRTTRNVTLTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L R L ++S + L G++ + Q + +P +A +P I Sbjct: 61 GHALLHEARRALCAVDSARDAVAAVRGLLRGELSIGTLQCLHVVDLPPVLAGFVTAHPGI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGD-LQCEAILSEPFFLLCHRDSALAVED 181 + L + E +R G +D + P D + ++ +EP L C D +A D Sbjct: 121 EVRLRQGGSGDLAEQVRAGRLDLAFAVRPARCPDGVLVHSLDTEPLVLACAGDHPMAERD 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V + L V G+R ++D LA G++ + E+ +L +VA G+GI++ Sbjct: 181 RVDPRELGEQPFVDFHPDWGTRDVVDRVLAETGVERRVALEVTDVHSLLELVACGLGIAL 240 Query: 242 LPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 +P + G V +P + + + STAA AL V++ Sbjct: 241 VPR-SFSAKNGQVRFVPLASPAPTWETVAITSD--PTSTAAAALLRDVQEASR 290 >UniRef50_D2QVQ4 Transcriptional regulator, LysR family n=22 Tax=Bacteroidetes RepID=D2QVQ4_9SPHI Length = 298 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 74/298 (24%), Positives = 142/298 (47%), Gaps = 7/298 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + + L VF TVA+ SF++A + ++Q A++ ++ELE+ G L DR ++ LT A Sbjct: 2 FDFR-LTVFYTVARRLSFTKAAAELFVTQPAITKHIQELESQLGTALFDRRGNQISLTTA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L E ++ D + + G++R+ AS TI+ ++IP +A ++PD+ Sbjct: 61 GNVLLRHAETIMGVYRQIEFDLNELKGKPGGRLRLGASSTIAQYVIPAVLARFGEQFPDV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + + +++ ++D G+V D++ + + L+C D LA D Sbjct: 121 TLSLLSGNTEQIEQALLHDEIDLGLVEGRTHHSDVRYTPFVKDELVLVCRADHPLAGRDE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQ---ANIVQEIGHPATLFPMVAAGIGI 239 + L+ LVL++ SGSR +++ AL G++ ++G + +++ G+ Sbjct: 181 ITLDELKTVPLVLREPGSGSREVVEHALRGAGLRLAELQQAMQLGSTEGIKTYLSSSSGM 240 Query: 240 SILPALALP--LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 + + A+P L G+ V+ +ER ++ + S A+ VR Q NA Sbjct: 241 AFVSIFAVPNELKSGTLRVLDVADLTIERDFYAIQLQGMSEG-LADTFMRFVRRQYNA 297 >UniRef50_C1M4D9 Putative uncharacterized protein n=2 Tax=Citrobacter RepID=C1M4D9_9ENTR Length = 302 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 80/300 (26%), Positives = 136/300 (45%), Gaps = 5/300 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN L+ L+ FV VA+E F RA R+ +SQ +S ++ LE G RLL RT R V LT Sbjct: 1 MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQILEQQVGARLLARTNRSVALT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHL--IPQCIAESHRR 118 AG+Q ++L +N R+ +G++R+ + + + + + ++ + Sbjct: 61 SAGKQFLADSRQILGLVNEAAARAERLHLGEAGELRIGFTSS-APFIKAVSDTLSLFRQS 119 Query: 119 YPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALA 178 YP + + + + + +G +D G++ + L+ E IL EP + R LA Sbjct: 120 YPAVHMQTREMNTREQIAPLNEGTLDLGLLRNTQLPETLEREIILHEPLMAMIPRAHPLA 179 Query: 179 VEDYVPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAG 236 + V L V D +G I + R G++ I QE+G T+ +VAAG Sbjct: 180 QKPVVTLAELANEPFVFFDPHVGTGLYDDILGLMRRYGLKPTIAQEVGEAMTIIGLVAAG 239 Query: 237 IGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 +G+SILPA + + ++ LV K+ S AA+ + + A+ Sbjct: 240 LGVSILPASFKRVQLYEMCWIPIAEEDAVSEMWLVWPKHHEQSHAAQRFREQLLAAVQAI 299 >UniRef50_C9KJ25 Transcriptional regulator GltC n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ25_9FIRM Length = 307 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 78/287 (27%), Positives = 130/287 (45%), Gaps = 5/287 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L QLK F +A+ F++A E + +SQSA+S S+++LE GV L +R R LT+A Sbjct: 1 MELTQLKYFQAMAKCHHFTQAAEEMAVSQSALSRSIQKLEQELGVTLFERHGRTSELTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ+ ++R++ EL ++ + +G V ++ ++ +P + + H RYP I Sbjct: 61 GQKFLFHVDRVIRELALAEQEI-ELDNGGAGVVHLSFLHSLGDTFLPLILRQFHERYPHI 119 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L+ + + E + G+ D + D + SE FL+ D LA + Sbjct: 120 DVKLNQQNSSMLSEQLTSGETDICLCST-MNEPDTAWMYLWSEEMFLVVPEDHPLAQKSR 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V + ++ V R ++ L IV E TL VAA +G+SIL Sbjct: 179 VNLREIEDEPFVALKPEYTLRQQVNQFLDLAESHPQIVFEGDEVHTLVSFVAAHLGVSIL 238 Query: 243 PALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDV 288 P +P E +V I+ P+ +R + + +R LS AA Sbjct: 239 PH--VPCTEHLGVVFVPISFPLCKRAVGIAWNTSRPLSPAAMTFQQF 283 >UniRef50_Q5X4A2 Hydrogen peroxide-inducible genes activator n=4 Tax=Legionella pneumophila RepID=Q5X4A2_LEGPA Length = 296 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 72/297 (24%), Positives = 127/297 (42%), Gaps = 2/297 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L+ L FV +A K F A +R +SQ +S +K+LE GV L +RT ++V+LTD Sbjct: 1 MNLRDLHYFVILADVKHFGEAAKRCFVSQPTLSMQIKKLEEELGVVLFERTNKQVLLTDQ 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G +L R ++L ++ + +G++R+ T+S +++P + E YP + Sbjct: 61 GSKLLDRTRKILILIDEMKELARQSEDPFTGELRLGVIPTVSPYMLPLVMPELKNEYPRL 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L + ++ + QG++D I+ P C+ + E F+ C LA Sbjct: 121 KVWLIEDKTHRLITKLEQGELDVAIMALPID-KRFSCQILYEEKFYFACANTHPLAQAKS 179 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V L+ ++L + R A TL MV AG+G+++L Sbjct: 180 VNINDLKNQPIMLLEEGHCLREQAMAVCQLAKADDIADFTATSLETLRLMVQAGMGVTLL 239 Query: 243 PALA-LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 PAL+ L + P R L L R A+ +++ + +A Sbjct: 240 PALSTLTASTNHLKCIPFSEPAPSRILGLFWRAGTPRQVCFNAVAELITKNVQSKLA 296 >UniRef50_C7I0K1 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I0K1_THIIN Length = 319 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 65/303 (21%), Positives = 134/303 (44%), Gaps = 3/303 (0%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N +++QL+VF A+ F +A + + L+ AVS ++ELE+ G+ L +R + V LT Sbjct: 3 NATIRQLRVFSAAARHLHFGKAAQEMHLTPPAVSMQIRELESQVGLPLFERQGKSVSLTL 62 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 G+ L + ++L L R+ +G++ + T + + +P+ +A H YP Sbjct: 63 TGEYLVVYARKVLATLKDAEDAMARLRGIKAGRLTIGMVST-AQYFVPRLLARFHAEYPH 121 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 ++ L ++ ++ ++ ++D I+ P + E + P ++ L+ Sbjct: 122 VEVRLSVGNREQLVSHLQNSELDLAIMGRPPRDVATRAEPFAAHPMGIIAPPQHPLSTGG 181 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 L ++++ SG+R + L ++ ++ + E+ T+ V A +GIS Sbjct: 182 PHSATLLTQFNFIIREPGSGTRATFEEYLHQHQMELPLFTEMQSNETIKQAVMANMGISF 241 Query: 242 LPALALPLPEGSPLVVKRITPVVE--RQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 L + L + L+ + R+ V + LS AEA + + G + +A Sbjct: 242 LSLHTIDLELRNNLLTVPSIEGMPLLRRWYAVNSLAKLLSPGAEAFRYFILEHGESFLAE 301 Query: 300 REG 302 G Sbjct: 302 TFG 304 >UniRef50_B5XVV4 Transcriptional regulator cynR n=5 Tax=Enterobacteriaceae RepID=B5XVV4_KLEP3 Length = 313 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 75/303 (24%), Positives = 145/303 (47%), Gaps = 2/303 (0%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+ L F+ VA+ + F+RA + +SQ A+S +++LE V+L DR+ R LTDAG+ Sbjct: 3 LRHLSYFIAVAEHRGFTRAAAALHVSQPALSQQIRQLEAMLEVQLFDRSGRYTRLTDAGE 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 R+L +L R GK+R+A + T + +++ + +RRYP ++ Sbjct: 63 IWLEYARRVLRDLEEGRRALHDAEDLQRGKLRIAMTPTFTTYVLGPLVEAYYRRYPGVKL 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 ++ + Q+ + + + ++D GI D D+ + +L+E L+ R LA E ++ Sbjct: 123 LIQEMNQERMETMLLEDELDVGIAFDESLSRDIVVQPLLTETLALVVSRAHPLAHESHLQ 182 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPA 244 QAL L+L +R ID R+ ++ ++ E + ++ + ++LPA Sbjct: 183 LQALDAQPLILLSSEFATREQIDRYCRRHRLEPDVRMEANSIGAVLTVIRGTLLATLLPA 242 Query: 245 LALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGREGDP 304 A+ + ++ +++R L++R+ S AA + R+ A + G Sbjct: 243 -AIAGQYDDLVAIELKPALLQRTACLLQRQGAWQSAAAREFIALAREIA-ATLEQENGQA 300 Query: 305 LYQ 307 LY+ Sbjct: 301 LYE 303 >UniRef50_A4XTW7 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas mendocina ymp RepID=A4XTW7_PSEMY Length = 309 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 70/287 (24%), Positives = 133/287 (46%), Gaps = 3/287 (1%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 + +QL+ F+ VA+ S + A + L+Q +VS + +LE + L ++ + + LTDAG Sbjct: 12 TFRQLETFLAVAEHLSVTEAARTLHLAQPSVSTQLAKLEQALQMELFEQLGKRLYLTDAG 71 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 +++ + D L+ ++ +G++R+ A T + +L+P+ + R+YP ++ Sbjct: 72 REVQAGAREIFDALDRLEMRLAQLNGLTTGQLRLGAVTT-AKYLVPRLLGPFCRQYPQVE 130 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 L+ + V+ + D + P DL+C A+ P ++ L+ + + Sbjct: 131 VQLNIANRSDVIRCLEDNRDDLYVFSQPPDHLDLECVALAENPLVVIAPAGHRLSGQR-I 189 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 W+ L + ++ SG+R I+ AR+G I + VAAG+GI+IL Sbjct: 190 RWEQLAQEPFLSREPGSGTRLAIEDHFARHGWPYKPHMTIASNEAIKESVAAGLGIAILS 249 Query: 244 ALALPLPEGSPLVVKRITP-VVERQLMLVRRKNRSLSTAAEALWDVV 289 L LV + + Q LVR + ++LS AA+A Sbjct: 250 RHTLIHTAVGNLVELDVEDFPIANQWYLVRWRRKALSPAAQAFSSFA 296 >UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46MA3_RALEJ Length = 296 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 69/294 (23%), Positives = 130/294 (44%), Gaps = 5/294 (1%) Query: 1 MNY--SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVV 58 M+ L+ L+ F+ +A+E +F+RA ER+ ++Q +S +++LE V LL+RT R V Sbjct: 1 MDIVMDLRHLRYFIAIAEELNFTRAAERLHIAQPPLSMQIRQLEEEMDVTLLNRTRRHVE 60 Query: 59 LTDAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRR 118 LT+AG+ + ++L + R + +G++ V + S L+P + R Sbjct: 61 LTEAGRIFLEQARQILRATERAVVQAQRAHRGETGRLTVGFFEHTSYTLLPPILRAYRER 120 Query: 119 YPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALA 178 +P ++ +L P E++R+GD D + + ++ E IL EPF L LA Sbjct: 121 FPSVEILLRWFPVVKQAEALRRGDADISFMRPVPDLEEVTWETILEEPFVLAVPARHPLA 180 Query: 179 VEDYVPWQALQGAKLVL--QDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAG 236 + + + V+ + A + A G ++ E+G TL +V++G Sbjct: 181 NAESISLKKCAQEPFVMYIPEMAPDFHAMNMRMCASAGFVPKVISEVGQVYTLLGLVSSG 240 Query: 237 IGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 GI +PA + + ++ML R+ + A + + Sbjct: 241 AGIGFVPASVRKVKFDHVVYKPIEGRQPTIEIMLGY-SQRTPTPLMTAFIETAK 293 >UniRef50_Q12EW2 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12EW2_POLSJ Length = 309 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 93/290 (32%), Positives = 148/290 (51%), Gaps = 1/290 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+Q++ FV VA+ SF+RA + + L+QSA+S V+E E RL DRTTR V LT Sbjct: 1 MNVTLRQIQAFVLVARLGSFTRAAQAMHLTQSALSLLVREFEGAIESRLFDRTTRAVTLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G L R ER+L +L S + ++ + G+V VAA +S+ +P +A +YP Sbjct: 61 VVGSDLFPRAERILADLESAISGVDKLMARERGRVVVAAPLLLSSTYLPPLLAAFFAKYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ VL D V+ +R G D GI D++ + SE A + Sbjct: 121 GIEVVLQDTLPSQVLPLVRGGAADVGIGTFASDEVDVRRTLLFSEAMVAAFPVGHAFSRL 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W + ++ S R L +A A G+ +E + +L MV AG+G++ Sbjct: 181 QKLTWADVAQEPVLALSRGSVFRDLTEAGFAAAGLILKPAREANYAGSLIGMVDAGLGVA 240 Query: 241 ILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVV 289 ILP A+ L + + + R+ P+++R++ LV+R SLS AA+ D + Sbjct: 241 ILPGYAVKLTDPARIGWHRVENPLIDREVSLVQRAGVSLSPAAQGFVDFI 290 >UniRef50_A9AT14 LysR family transcriptional regulator n=11 Tax=Burkholderia cepacia complex RepID=A9AT14_BURM1 Length = 300 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 91/297 (30%), Positives = 152/297 (51%), Gaps = 4/297 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M +L+ FV VA+ +F RA E++ L+Q +S +++LE GV L RTTR V LT Sbjct: 1 MKVENSELEAFVAVAELGTFHRAAEKLHLTQPGLSRRIQKLEQALGVELFQRTTRSVTLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+Q + +L L + ++ GKVRV++ T+ A L+P+ + + +YP Sbjct: 61 GVGRQFLPMAREQIAQLGMMLSSIQEIAEKRYGKVRVSSIPTVVAQLLPKVLLQYAEKYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I + D +V+ +R G +FG+ + PG DL E + + + L HRD LA Sbjct: 121 LIGVQILDGNHDFVLSQVRAGIAEFGVSLHPGDDEDLLFEPLFPDRYVLAVHRDDPLAQA 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 D V L+ A+LV+ SG+R L++ + + ++ E+ H + + +VAAG+G + Sbjct: 181 DGVTLAELRHARLVIGGRDSGNRLLLEMLMGQEAVRLRWFYEVEHISCVAALVAAGVGCA 240 Query: 241 ILPALALP----LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQG 293 ILP A+ L V +PV+ R + +VR + S+S+ A L +V+ Sbjct: 241 ILPRSAVDGVGMLASPDVRAVPITSPVISRTVGIVRHRAVSMSSMASDLCALVKAAA 297 >UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=Q21IY2_SACD2 Length = 299 Score = 269 bits (689), Expect = 8e-71, Method: Composition-based stats. Identities = 75/283 (26%), Positives = 128/283 (45%), Gaps = 4/283 (1%) Query: 8 LKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLA 67 LK F+ VA+ SFS A + + ++Q AVS + LE L DR R+V LT+AGQ L Sbjct: 10 LKAFLAVAEHHSFSVAAQHLFITQPAVSKRIAALEQELNHILFDRLGRDVALTEAGQALL 69 Query: 68 LRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLH 127 R + +L+ ++ R ++ G +RVA S I H +P + E + + Sbjct: 70 PRAQAILNSMHEAQRTIREFSGEIVGTLRVATSHHIGLHHLPPILREFAANHKQVNLQFD 129 Query: 128 DRPQQWVMESIRQGDVDFGIVID-PGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQ 186 + E + +GD D +V P +L+ + +P + + LA + + Sbjct: 130 FLDSEQAHEKVLRGDCDLAVVTLAPTLEENLEASVLWPDPLCFIVGANHPLATSKNISLE 189 Query: 187 ALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALA 246 L +L D + + L+ G+ N+ + T+ MV G+G S+LP Sbjct: 190 ELSRTPAILPDLNTYTGRLVKHFFDTQGLALNLNMATNYLETIKMMVTVGLGWSVLPKTM 249 Query: 247 LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 + + S ++ +ERQL +V K R+L AA A ++V+ Sbjct: 250 V---DSSLKILPIKNIQLERQLGVVIHKKRTLGNAARAFFEVL 289 >UniRef50_A6DK62 Hydrogen peroxide-inducible genes activator n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DK62_9BACT Length = 293 Score = 269 bits (689), Expect = 9e-71, Method: Composition-based stats. Identities = 77/287 (26%), Positives = 139/287 (48%), Gaps = 4/287 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + K L+ F +A+EK F +A + G+SQ A+S +K++E GV L +R+ R+VVL+ Sbjct: 1 MTFKDLEYFAILAKEKHFGQASVQAGVSQPALSIQIKKMEAELGVCLFERSNRQVVLSPE 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L R +++L ++ + G++ + A T++ +L PQ I E H+ YP++ Sbjct: 61 GEVLLERAQKILRQVEDFQTCARQFKDPYQGQLILGAFPTLAPYLFPQIIDELHQSYPEM 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 +F + + + +++ +++G VD + P L E I SE F + + Sbjct: 121 KFFIKEEKTETLLKMLKEGKVDAAFIALPHEDSTLDSEFIFSEEFLFATPANYPEDFPNE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + Q+L+G +L+L D R + N + N TL MVAAG+G++++ Sbjct: 181 LSLQSLKGRELMLLDEGHCFRDQALELCSVNQARENFDFRASSLETLRHMVAAGLGVTLI 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 P A +K P +R++ L RK S AE ++ Sbjct: 241 PKCA-QDESAKIKYMKFSDPSPKREIALFWRKT---SPKAEIFREIA 283 >UniRef50_A9B3V4 Transcriptional regulator, LysR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3V4_HERA2 Length = 298 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 80/294 (27%), Positives = 130/294 (44%), Gaps = 3/294 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L QL+ F VA+ + ++A ++Q ++S +++ LE GV L DR R V L+DA Sbjct: 1 MELSQLRYFEAVARLGNVTKAAHEQHIAQPSLSKALRALEQELGVHLFDRVGRGVELSDA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L R+L EL + G V + + T+ LIPQ +A +RRY I Sbjct: 61 GKLLLPYARRVLAELQAARHALQSRADLTVGHVSLGVTPTVGTRLIPQALAAFNRRYRGI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 Q LH+ ++E + G VD IV ++ ++SEP + A Sbjct: 121 QLELHEAGASELVELLNAGVVDLAIVSALVH--GVESTTLMSEPLVVAVGLQHRFAQRQS 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L+ +L R + G IV + G T+ +VAAG+G++++ Sbjct: 179 IAANELRDEGFILFPQGYELRNYTLQLCEQAGFAPRIVLDGGEMDTVVSLVAAGLGVAVV 238 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 P LA+ G + ++R L L+R R S AA AL V+ + + Sbjct: 239 PQLAIDQRMG-LHALMIDAGGLQRTLRLIRHSQRQPSPAAAALHRVLHEWVSQH 291 >UniRef50_B4CZS1 Transcriptional regulator, LysR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZS1_9BACT Length = 305 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 76/291 (26%), Positives = 131/291 (45%), Gaps = 2/291 (0%) Query: 8 LKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLA 67 KVF +A+ SFS+A ++QSAVS ++ LEN V L++R R LT G Sbjct: 6 FKVFCDLAETGSFSKAAVLNAITQSAVSQQIRALENKFQVTLVERGRRNFALTAEGNAFL 65 Query: 68 LRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLH 127 +L+ N+ + ++G++R+AA +I H +P + ++PD++ + Sbjct: 66 EASREILEVYNNLDHRLHELRDVIAGELRIAAIYSIGLHELPSHLKAFREKFPDVELHVE 125 Query: 128 DRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQA 187 R Q V + GDVD G+V P LQ E + L+CH + LA + + Sbjct: 126 YRRSQQVYTQVLGGDVDIGLVAFPTKRNGLQIEIFSEDKLVLICHPNHPLAGRKKIKIEE 185 Query: 188 LQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALAL 247 L G K + + +R +ID + I+ E + T+ V G+SI+P + Sbjct: 186 LNGEKFIAFEPDLPTRKVIDRHFRDHQIEIEHAMEFDNIETVKRAVEIESGVSIVPRNTV 245 Query: 248 --PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 + G + P + R L ++ ++NR+ S A + ++ AL Sbjct: 246 RQEVESGVLSALDIEGPKMSRPLGILTKRNRARSPAHKEFVAALKRDFAAL 296 >UniRef50_B7X3R9 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X3R9_COMTE Length = 296 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 151/290 (52%), Gaps = 2/290 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN+ + LK FV VA+ SF RA E + +SQ A+S V++LE ++LL+RTTR+V L Sbjct: 1 MNFDIADLKAFVAVAELASFKRAAELLHISQPALSRRVEKLEQALSLKLLERTTRKVELN 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ R + +L EL ++L + ++L G V +A ++ ++ I + +++P Sbjct: 61 AMGRVFLPRAQHVLAELEASLIGMTELNERLHGLVTIACIPSVVDTVVASAIHQIKKQFP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ + D+P ++ ++ + +VDFGI DL E + SE F L C +D LA Sbjct: 121 RIRLRILDQPAADILLTVARSEVDFGIGYLGASEPDLDFEELASESFVLACRKDHPLATR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W L V Q SG+R LID AL+ + + V E+ H +L +V G+G+ Sbjct: 181 SSICWSELAHQDCVTQAQGSGNRLLIDQALSNTVTRPHWVCEVQHVPSLLSLVRRGVGVG 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 +P A+ + + P V R + L+ R+ ++LS A+ L +R Sbjct: 241 AVPQHAIS--GTDLCGIPLVEPQVLRSIGLISRRGKALSAMAQELQRALR 288 >UniRef50_C4ZHT7 Transcription activator of glutamate synthase(LysR family) n=6 Tax=Clostridiales RepID=C4ZHT7_EUBR3 Length = 293 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 3/293 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L QL+ F +AQE+ ++RA + + ++Q ++SH++ +LE G RL ++ R VVLT Sbjct: 1 MNLSQLQYFKVLAQEEHYTRAAQMLSITQPSLSHAISQLEQELGTRLFEKKGRNVVLTRY 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP-- 120 G+ +E L LN ++ + G + +A T+ + P+ + + YP Sbjct: 61 GKMFLPYVEESLKVLNEGVQRIQEVNGSRHGIIHLAYIYTMGSEFAPKLVRKFLDAYPDY 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 DI+F +++ ++ D D+ + I ++ L D L+++ Sbjct: 121 DIEFHFTVGTTGEIIDGLKDDKYDIVFSSYKDGEQDIDFKKIANQKLVLAVPMDHPLSIK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 D V + + + SG RP+ID G + E+ +++ +VA G GI+ Sbjct: 181 DSVDLRDTIEYPQIYFEKGSGLRPVIDQMFEEIGQFPKVAFEMEEDSSMAGLVAQGFGIA 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQG 293 ++P + + L S + P ER + L K R LS A+A V ++ Sbjct: 241 VMPDIPI-LRSLSVKTLDIYNPPYERAVYLATLKQRYLSPVAKAFIRFVIEET 292 >UniRef50_UPI0000E0F9F3 Transcriptional Regulator, LysR family protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0F9F3 Length = 294 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 72/294 (24%), Positives = 140/294 (47%), Gaps = 3/294 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ S KQL+ F+ +AQ +F+ A ++ ++Q A+S ++K+ E+ G L RTTR V LT Sbjct: 1 MSLSFKQLQAFLMMAQSHNFAEAAIKMHVTQPALSSAIKKCEDILGGELFTRTTRTVALT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ +RL E + + + +G + VAA + + +P+ + + H YP Sbjct: 61 KEGEAFLPIAQRLHTEYQDAMAQIQAVFAKQTGTLSVAAMPSFAERYLPEYLYQFHILYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSAL--A 178 +I + D + V++ +++G V+ G +P D+ + ++ F ++ H L Sbjct: 121 NISIKIEDVVVEKVIDLVQEGKVECGFTFEPKHNLDITFTPLFTDQFVVVMHASHPLNQP 180 Query: 179 VEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 + + +V+ + S R ID+ I +I+ E TL +V IG Sbjct: 181 KHRTLTLHDIATFDMVVMNRNSNLRVFIDSVYEEQEITQHIIAEASQIGTLGQLVKRQIG 240 Query: 239 ISILPALALPLPEGSPLVVKRITPV-VERQLMLVRRKNRSLSTAAEALWDVVRD 291 I+I+P L+ E LV + ++R++ ++ + LS +A ++V + Sbjct: 241 IAIVPQLSSQRMEELGLVCIALNESKLQRKVGIITNPYQQLSVTTQAFLEMVEN 294 >UniRef50_A4J6T9 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J6T9_DESRM Length = 299 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 71/299 (23%), Positives = 134/299 (44%), Gaps = 5/299 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L L+ F+ VA++K+ S A + I ++Q A+S + LE + G L++R R V LT A Sbjct: 1 MNLSTLQTFIVVAEKKNLSLAAQEIHITQPAISKQLSVLEAYFGTALVERKGRGVSLTPA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ +L++LN R+ +M ++ G++ + AS +++P I + YPD+ Sbjct: 61 GELFYRHAREMLEQLNKAEREIRQMSGEIRGRMILWASTIPGHYILPPIIGTFKKEYPDV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 Q VL + + + + V ++ S+ ++ D A + Sbjct: 121 QTVLQIGDSKEAIRKLLEESAHLAAVGILPNNKRIEGIKFFSDELVVIAPTDHPFAELNE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGI---QANIVQEIGHPATLFPMVAAGIGI 239 VP + L LV ++ SG+R +++ L + G+ + NI E+G + V AG G+ Sbjct: 181 VPIEKLAKEPLVWRELGSGTRSVVETFLTKGGLSTDKLNIALELGSTGAIVTAVEAGAGV 240 Query: 240 SILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 S++ A +K ++R L LV + ++ S +A Q + Sbjct: 241 SVVSRWATLKEQALNKIATLKIKDLPMQRDLFLVYPRRKNRSPMIDAFIKYALKQNPPI 299 >UniRef50_UPI000178A8A2 transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A8A2 Length = 300 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 80/289 (27%), Positives = 122/289 (42%), Gaps = 3/289 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 LKQL+ F+ + +E FSRA E++G+S VS ++ LE GV L DR + +VLTDA Sbjct: 1 MELKQLQYFMAICEELHFSRAAEKMGVSAPNVSQQIRRLEAELGVLLFDRVGKTIVLTDA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L + L + Q G + + + + + + H+ YP I Sbjct: 61 GAILHEHAAAVFGHLQQAGDAIADLKQMQGGSLSIGVLPGDADLMFNALLLDFHQTYPTI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + V E + +D G+ I P L + E F L HRD LA E++ Sbjct: 121 SLSLLE--TMKVTEQVLDRSIDIGVTIGPVIDERLTSIPLFHEEFSLAVHRDDPLAGENF 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 +P L+ +V+ R LID NG ++L MV +G+G +L Sbjct: 179 IPLNRLRSMNMVMFPPDHQCRKLIDRFCMDNGFAVQPHMVTTTLSSLLQMVQSGVGACVL 238 Query: 243 PALALP-LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 P L L L VV P + + L+ R +R + A +R Sbjct: 239 PRLLLDNLRNTEIKVVHLRNPTPSQDICLIYRSDRFMGYAMRTFIKNLR 287 >UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3192A Length = 343 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 75/282 (26%), Positives = 129/282 (45%), Gaps = 2/282 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ FV VA+E SF+RA R+ ++Q VS V+ LE G +LLDR+ R V T+A Sbjct: 1 MELRQLEYFVAVAEEASFTRAAARLHVAQPGVSAQVRRLEAELGEQLLDRSGRSVRPTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G + L + + + + G+V + + + ++P +A R +PD+ Sbjct: 61 GVAVLPHARAALASVGAVRGAIEELTGLVRGRVAIGMVSSYPSAVLPDLLASFSRLHPDV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIV--IDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + L + ++++++ G++D ++ GP L + + EP LA Sbjct: 121 EITLGEDNSDRLVQALQHGELDLALIGSARTGPPPGLATQTLTDEPLVAAVSHTHPLATR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + AL G+ L+ +G R +D A A G++ I E P L + A G+G++ Sbjct: 181 STLTVAALAGSPLMCLPRGTGIRTALDDACATAGVEPRIAFEASDPVPLALLAARGLGVA 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAA 282 ILPA G + P ++ L R +S AA Sbjct: 241 ILPASLAAARSGELHAIALTRPQPRGRIELAWRAEGPVSPAA 282 >UniRef50_A9F7Y4 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F7Y4_SORC5 Length = 327 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 5/300 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ F VA+E+ F RA +R+G++Q +S +++LE+ G L DR+ R V LT A Sbjct: 1 MDLRHLRYFTAVAEERHFGRAAQRLGIAQPPLSRQIQDLESELGFSLFDRSRRRVELTPA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L + R+ D L + + R +G++ V +++ I + + P + Sbjct: 61 GAVLLAHVRRVFDALELAVHEARRASVGETGRLVVGYLSSLAYSGITELVRTFRGELPAV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L + P Q +E+++ G +D G V P L E + EP + D LA Sbjct: 121 ELALREMPPQEQIEALKDGRIDVGFVRAPLHDARLASECVRREPLLVALPADHPLAARKR 180 Query: 183 VPWQALQGAKLVL--QDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 +P + L V+ + S L+ G I QE H + +VAAG G+S Sbjct: 181 IPLELLSREPFVVFPRQRGSAFFDLVMGLCRAAGFSPRIAQEALHLD-ILSLVAAGFGVS 239 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 ILP ++ L ++ I L++ R + + S VR G + R Sbjct: 240 ILPE-SIKNVGRKGLALRPIVGAPSTDLLVAWRADDA-SPTLRQFLSFVRRVGVSKGKAR 297 >UniRef50_Q0F2Z7 Transcriptional regulatory protein, LysR family n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2Z7_9PROT Length = 308 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 57/299 (19%), Positives = 132/299 (44%), Gaps = 3/299 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ SLKQ K+ V S++ A + + ++Q AVS +K++E G++L +R+ +++ T Sbjct: 6 MHISLKQFKIIEAVVDYNSYTEAAKALYMTQPAVSMQIKQIEGQLGLQLFERSGKQIKAT 65 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG++L + ++ + GK+ + + +++ P+ +A H +YP Sbjct: 66 EAGKELLHYARNIRQQMEEAKTVLEELKGLKRGKLHL-TMASTASYFAPRLLAAFHHQYP 124 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ L + +++++ D I+ P L L P ++ + LA Sbjct: 125 GVKVTLDVTNRSGLLDALDNNTTDMAIMGRPPEGHALTGIPFLDNPLVVIAWPEHPLACS 184 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 D +P + ++++ ASG+R + + + + E+ + V A +G+ Sbjct: 185 DSIPLSDVADESFIVREAASGTRMATERYFSEHRLSLTPGMEMNRSEAIKQAVMAELGLG 244 Query: 241 ILP--ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALM 297 I+ + + L +++K + R +V R N+ + + D + +L+ Sbjct: 245 IVSLHTIEMELTLKRLVILKVEDFPIMRHWYIVHRNNKRFAAIQKVFRDFAVSESRSLL 303 >UniRef50_A1SY80 Transcriptional regulator, LysR family n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY80_PSYIN Length = 294 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 133/291 (45%), Gaps = 4/291 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 K+L F +AQ +F++A E +G++QSA+S S+++LE ++L++R R++ +T Sbjct: 1 MDFKRLYYFTVLAQTGNFTKAAEELGIAQSALSMSIQKLEKQLALKLINRAERKMSITSD 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ L +++LD + + SG + + I ++ +P +A +RYP I Sbjct: 61 GQVLLKHAQKILDNVKQAKIQLQELKGLESGTINLGTPAMIGSYYLPDTLALFKQRYPGI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 Q +H+ + + G++D ++ +++C + E R+ A Sbjct: 121 QINIHEAGTATLANMLLDGELDLAMIRADRHHDNIRCITLAKEQIVACVPREHEFAKCYN 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS-I 241 + + LVL R + + ++GI +I E L ++ IGIS Sbjct: 181 ITLEQFCNQPLVLFREGYFLREAVSSYCQQHGINPDIRFETNLIELLKSLIRKKIGISTC 240 Query: 242 LPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 LP + L E S LV P + L + + + LS A++AL ++++ Sbjct: 241 LP---IILTEDSELVTVPFNPPIPIHLGIGWKASHYLSQASQALVTFLQEE 288 >UniRef50_C9PFK4 Transcriptional regulator substrate-binding of LysR family protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PFK4_VIBFU Length = 304 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 65/289 (22%), Positives = 128/289 (44%), Gaps = 2/289 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 LK+L+ FV +A +F++ +++ ++QSA+S S+++LE G++L++RT R++ LT Sbjct: 1 MELKRLQYFVALAANGNFTKTADQLNIAQSALSVSMQKLEKEIGLKLINRTNRQIQLTSD 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G +L R+L+++ + + GK+ S + ++ P+ +A YP+I Sbjct: 61 GMRLLFHARRILEDVALAEIEMDELKGLERGKIDFGVSAMLGSYFFPEALAAFTETYPNI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + + + + +G +D V P+ L+ A+ E ++ A Sbjct: 121 RIHIQEHGTATLEKMLLEGALDLAFVRTDQPLEQLRYVALCPEEIVACVNKSHPFAQRSE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V + L+L R I N I +I E + ++ IGIS Sbjct: 181 VSLEQFCQQPLILFRDGYLLREAISRYCRNNNITPDIRYETNLIELVKALLKKDIGISTC 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 L + + PLV P ++ + + + + LS AA A + D Sbjct: 241 --LRRIIHDNEPLVCVPFNPPIKVEFGIGWKSSHYLSNAARAFLKFMED 287 >UniRef50_A6SUU1 OxyR hydrogen peroxide-inducible genes activator n=125 Tax=cellular organisms RepID=A6SUU1_JANMA Length = 331 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 80/296 (27%), Positives = 137/296 (46%), Gaps = 9/296 (3%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L +LK V VA+EK F A E ++Q +S ++K+LE+ GV L +R E+ +T Sbjct: 17 MTLTELKYIVAVAREKHFGHAAEACFVAQPTLSVAIKKLEDELGVTLFERGGSEISMTPL 76 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G Q+ + ER+L++ + + L G R+ TI+ +L+P + R P + Sbjct: 77 GAQIVAQAERVLEQTAAIKEIAKQNKDPLVGPFRLGIIYTIAPYLLPPLVKTIIERVPQM 136 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 VL + ++E +RQG++D IV P P L + + EPF + + A D Sbjct: 137 PLVLQENFTVKLLELLRQGELDAAIVALPFPDQGLLVQPVYDEPFVVAVPKHHKWANRDS 196 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAAL------ARNGIQANIVQEIGHPATLFPMVAAG 236 V L+ ++L R + + +G E T+ MVA+G Sbjct: 197 VSTDDLKSETMLLLGNGHCFRDQVLEVCPEMSRFSTSGDGIARTFEGSSLETIRHMVASG 256 Query: 237 IGISILPALALPLPE---GSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 IGI++LP ++P + G + P R+++LV RK+ + A EA+ + Sbjct: 257 IGITVLPQASIPDMQAKDGMLRYIPFTQPGPSRRVVLVWRKSFTRGAAIEAVRQAL 312 >UniRef50_B8IJK2 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IJK2_METNO Length = 306 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 72/291 (24%), Positives = 132/291 (45%), Gaps = 3/291 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ FV +A+++ F RA E + ++Q +S +K LE+ V L DR+TR + LT A Sbjct: 1 MDLRHLRYFVVLAEQRHFGRAAELLNMAQPPLSQQIKALEDELEVTLFDRSTRPIELTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L ++L ++ T R GQ G + + + + + +P + R+PDI Sbjct: 61 GRTLLREARQILHHVSRAQAATRRAGQGQDGHLVIGVTGSAAMEFLPPVLLAFRARWPDI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L + + ++ +G++ G V P L + +PF + D A + Sbjct: 121 RLSLREMSSPEQIAALERGEIHIGFVRPPVLDDRLNVRLVHQDPFVVALPGDHPQAGVEG 180 Query: 183 VPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V L G L++ D A G R LI G ++ T+ +V+AG+G + Sbjct: 181 VRLADLNGTALIIFDPAEAPGFRDLIIHVCRTAGYVPETLESAPQMTTMLALVSAGLGFA 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 ++P A L + + P +L V +++++ AE L V+ + Sbjct: 241 LVPRSARRLALERVVFRPLLDPCAAVELYAVWSRDKAV-RLAEELVSVIDE 290 >UniRef50_A3JD31 Transcriptional regulator, LysR family protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JD31_9ALTE Length = 294 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 85/290 (29%), Positives = 145/290 (50%), Gaps = 6/290 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++QL+ +TV +E SF A R+ +Q A+S +V+ELE G L+R ++ V LT Sbjct: 5 LKIQQLRYVITVVEEGSFHAASRRLHRTQPALSMAVRELEQKLGQNFLERGSK-VRLTPF 63 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ R L+++ + RD G + +A ++++ ++P +A R+PD+ Sbjct: 64 GEYCLPRFRDLVNQHDRMARDVAAHADGREGHIHIATVPSVASRIMPSFLARFITRFPDV 123 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 LHD +V + + G+VD GI +L + + ++C RD ALA Sbjct: 124 NISLHDENAHYVCQMVANGEVDLGITSLWQNSEELHYRHLFEDKIGVVCRRDHALAQHKT 183 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + WQ L+G KL+ +G+ L+ A ++ N I + +L M+ AG G++ L Sbjct: 184 LDWQRLRGEKLI----GNGTSRLLMNTAAAELVE-NSAFYISNMISLLAMLEAGAGVTTL 238 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 P LA P S + P V R++ LV+ NR+L+ AA+A+ V +Q Sbjct: 239 PRLAFPEQSASLCFIPLDNPDVVRRIGLVKSANRTLAPAAQAMEAFVLEQ 288 >UniRef50_C5CQD2 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CQD2_VARPS Length = 302 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 85/301 (28%), Positives = 148/301 (49%), Gaps = 2/301 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+ F VA+ SF+ A +++ L+QSA+S V+ELE GV+LLDR TR V L+ Sbjct: 1 MNLTLRQLRAFAAVAETGSFTAAAQQLHLTQSALSVLVRELEREMGVQLLDRHTRRVQLS 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG++ + RLL +L + + + G +R+AA Q ++ L+P+ IA +P Sbjct: 61 EAGREFLPSVHRLLGDLAGAVAGVTDLRDKKKGLLRLAAPQLMACTLMPRVIALYREAFP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 D+ L D + ++ + GDV+ + D G ++ + + +L+C A A Sbjct: 121 DVDVRLADTLPEHLLAGVTAGDVELAVGQDVAVDGAVERRTLFRDRHWLICPPGHAFAKR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANI-VQEIGHPATLFPMVAAGIGI 239 V W L + R L + A A + QE+ + T MVA+G+G+ Sbjct: 181 RKVRWHELGPYTFIAPTRDFRQRVLPELAPAERELMLRPGTQEVSYMTTALGMVASGLGL 240 Query: 240 SILPALALPLPEGSPL-VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 ++ P + PL L +V+ +P R++ + R+LS AA + +++ Sbjct: 241 TVCPTYSAPLVRAHGLQMVRLESPDFHREVCIYSAARRTLSPAAASFVEILERHARTQPK 300 Query: 299 G 299 Sbjct: 301 A 301 >UniRef50_D1VD43 Transcriptional regulator, LysR family n=1 Tax=Frankia sp. EuI1c RepID=D1VD43_9ACTO Length = 361 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 70/300 (23%), Positives = 127/300 (42%), Gaps = 5/300 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL FV VA+ K F+RA R+ ++Q ++S ++ LE G L +R + LT A Sbjct: 19 VQLQQLAYFVAVAETKHFTRAAARVHVAQPSLSAQIRALETELGSPLFNRARGNITLTAA 78 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L ++L + + R+ + G VRV A+ ++ ++P+ + +RYP I Sbjct: 79 GEALLPLARKILADADMARREVQELTDLRRGTVRVGATPSLCTGMLPEVLRLFRQRYPGI 138 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDP--GPVGDLQCEAILSEPFFLLCHRDSALAVE 180 Q ++ + + ++ + G +D ++I P G L +L E ++ D V Sbjct: 139 QLLVEEGGSRDLVGELAVGALDLALIILPLQGSDPALATAPLLREDLVVISSPDGPPPVR 198 Query: 181 DY-VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 + + L+ LV+ R A G + E G + V AG+GI Sbjct: 199 TAQMAVEDLRDRPLVMFRRGYDLRDFTVGACRAAGFEPTFAIEGGEMDAVCGFVMAGLGI 258 Query: 240 SILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 +++P++ P + R + L R++ AA L + D A Sbjct: 259 AVIPSMVA--FRQPLRTTPFAAPGLHRTIGLAHRRDVEPPRAARELRATLVDFVANAAAA 316 >UniRef50_B4DCH5 Transcriptional regulator, LysR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCH5_9BACT Length = 298 Score = 267 bits (683), Expect = 4e-70, Method: Composition-based stats. Identities = 87/288 (30%), Positives = 146/288 (50%), Gaps = 2/288 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L QL+ F+ VA++++F+RA R+ L+Q+A+S +++LE+ L R RE LT A Sbjct: 1 MELYQLQYFLEVARQRNFTRAAARLHLAQAALSEQIRKLEDELATPLFQRGRRESTLTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L E LL+ + + SGK+ + A ++SA L+P + +R+P + Sbjct: 61 GETLRGHAEALLERAAAARHAVQELVGLRSGKLVIGAIPSVSAGLLPAAVTAFRKRHPQV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + V+ + + V E + G V+ G++ P P G +L+EPF +L A+A Sbjct: 121 ELVIAEGTSEAVAEGVESGRVEMGVIQHPTPAGPFDERTLLTEPFVILAGPHHAIARHRR 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V +L G V + R AA G + + E G T+ +VAAG+G++IL Sbjct: 181 VSLASLAGEPFVFFKGRA--RESALAACRAAGFEPRLACESGELETVRALVAAGLGVAIL 238 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 P LA + +V+ P VER+L++V R+ + S AA ++R Sbjct: 239 PELAAQRARPACALVRLSEPKVERKLVIVTRRGHAPSPAAAEFETLLR 286 >UniRef50_A6T102 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T102_JANMA Length = 305 Score = 267 bits (683), Expect = 4e-70, Method: Composition-based stats. Identities = 94/294 (31%), Positives = 152/294 (51%), Gaps = 1/294 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+ FV VA+ F+ A ER+ ++QSA+S ++ELE ++L DR TR V LT Sbjct: 1 MNLTLRQLRAFVAVAELSQFTLAAERLHITQSALSMLIRELEKELELKLFDRHTRMVRLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 + G++ L R+L EL + + G+V VA S ++ L+ + E +R+P Sbjct: 61 EHGEEFLLTARRVLSELEVAVMQSRESVNYKRGRVAVACSTVLAVTLLTPFMREFAQRHP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ +L D ++ + + + GDVDF + P ++ I S+ F LL + L + Sbjct: 121 GIKLMLRDVAEESIKKRLLNGDVDFSVGTQLNPESEISELPIFSDHFVLLMPKGHPLTKQ 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 +P QA+ ++ +S R +++A L R I NI E P+T+ MV G+GI+ Sbjct: 181 TRIPLQAISQYPVIAMAPSSSIRAVLEAHLKRLDITLNIAYEASFPSTIIAMVRNGMGIT 240 Query: 241 ILPALALPLPEGSPLVVKRITPV-VERQLMLVRRKNRSLSTAAEALWDVVRDQG 293 ILPA A L +VV+ R + + +NRSLS AAE + + Sbjct: 241 ILPANAHQLTSTQGIVVRNFGKSNFTRTVCTFQLRNRSLSPAAELFHTELLEYV 294 >UniRef50_Q7NKC0 Nitrogen assimilation transcriptional activator n=1 Tax=Gloeobacter violaceus RepID=Q7NKC0_GLOVI Length = 326 Score = 267 bits (683), Expect = 4e-70, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 118/293 (40%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 +QL+ F+ + SF A E+ G+SQ +S + LE G L DRT R LT G+ Sbjct: 15 RQLQYFLALNHCGSFRLAAEQCGVSQPGLSKQIMALEGELGGPLFDRTGRRASLTPLGEC 74 Query: 66 LALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFV 125 R EL + G + + G++ +A +++A+L+P +A +++P Q Sbjct: 75 FLPYARRAYKELEQSRAAIGELLKPDRGEICIAGLHSVNAYLLPALLAVFRQKHPGTQLR 134 Query: 126 LHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPW 185 L + +++ + VD I++ P +L + E +L LA V Sbjct: 135 LTSLGSERIIKVLLDRLVDAAILMGPVHSPELVSTPLYEEELVVLLPAHHPLARRPSVRL 194 Query: 186 QALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPAL 245 + V+ R + G ++ E+ MV +G++ILP Sbjct: 195 AEVAILPQVVFRDGYAMRTALVQHFRAIGATVDVAVELNTLEAFKEMVRQEVGVAILPLC 254 Query: 246 ALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 A+ ++ + P + R++ LV RK+ A +V + A Sbjct: 255 AVQHLGTDLVIARLEEPSITRRVELVCRKDNYQVPVVAAFTRLVAEHLPTAFA 307 >UniRef50_C9YD50 RuBisCO operon transcriptional regulator n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YD50_9BURK Length = 326 Score = 266 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 75/303 (24%), Positives = 145/303 (47%), Gaps = 4/303 (1%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N +L+QL++F VA S+SRA E + ++Q AVS +++LE G++LL +T R+V L+ Sbjct: 23 NLTLRQLRLFEAVATHLSYSRAAEVMNVTQPAVSMQIQQLETEVGLQLLVKTGRKVSLSQ 82 Query: 62 AGQQLALRLERLLDELNSTLRDTGRM--GQQLSGKVRVAASQTISAHLIPQCIAESHRRY 119 AG+++ + R+L+++ G + G + + + + P + R+ Sbjct: 83 AGEEMLRQCRRILNQVLLAEESMGAFHPAEGGHGGLLHLGVVSSAHYFAPALLMAFAERW 142 Query: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 P ++F L ++ ++ ++ +D I P D++ E P ++ + LA Sbjct: 143 PGVKFKLTVDRRETILAMLQGHQLDVAIAGYPPSEADVEAETFAQNPHCIVASANHPLAR 202 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 + V W AL+ + ++ S +R + + +Q + E+ T+ V AG+GI Sbjct: 203 KRRVHWDALRNEPFIFREPGSATRHFFEHLIQAQSLQVRLSMELSGNETIKQAVIAGMGI 262 Query: 240 SILPALALPLP-EGSPLVVKRITPVVER-QLMLVRRKNRSLSTAAEALWDVVRDQGNALM 297 S L A + E L V ++ + + L+ R++ SLS +A + V +G AL+ Sbjct: 263 SFLSAHTFQVEFEAGKLAVLQMEDMPKMLDWCLLHRRDSSLSGVNQAFREFVLTEGAALV 322 Query: 298 AGR 300 R Sbjct: 323 QCR 325 >UniRef50_C6E9D5 Transcriptional regulator, LysR family n=8 Tax=Desulfuromonadales RepID=C6E9D5_GEOSM Length = 305 Score = 266 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 76/294 (25%), Positives = 135/294 (45%), Gaps = 5/294 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +LKQL+VF+ VA+ SFS+ E ++QS VS + LE+ G++LLDRT + + T+ Sbjct: 1 MNLKQLEVFIKVAESGSFSKGAEATFITQSTVSQHISALESEFGMKLLDRTGKGALPTEG 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L R +L++ R ++ +A S ++IP + R+P + Sbjct: 61 GKILLERARKLVEYAKEIPVALARFKGIEEAELNIAGSSIPGEYMIPAALPLLISRFPGV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 VL + V+ + +V+FG+V L + + L+ A + Sbjct: 121 TIVLLQGDSRDVLRKLMAEEVEFGVVGGRFEEESLDFTPLAKDELVLIAPAGHRWAKKSR 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQA---NIVQEIGHPATLFPMVAAGIGI 239 + + L VL++ SG+ AL G+ + +G + V AGIG+ Sbjct: 181 ITKEELMAEPFVLRETGSGTGRATAKALREAGLDPAKLKVAVHLGSNEAVKRAVIAGIGV 240 Query: 240 SILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 S + A+++ L +GS + V+ ++R L RK R LS AA A +++ + Sbjct: 241 SYVSAVSVQRELEQGSLVQVRVAEVEIKRDFFLATRKGRELSPAAIAFKEIMIE 294 >UniRef50_A7IBY1 Transcriptional regulator, LysR family n=15 Tax=Alphaproteobacteria RepID=A7IBY1_XANP2 Length = 313 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 68/290 (23%), Positives = 132/290 (45%), Gaps = 3/290 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L+QL++FV VA+ + ++ + L+QSA S ++ LE +L DR R +VLT+A Sbjct: 1 MTLEQLRIFVAVAEREHVTQGARDLNLTQSATSAAIAALEARYATKLFDRVGRRIVLTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + +L +++ + + G + +AASQTI+ + +P I ++P + Sbjct: 61 GRLFLSEAKAVLARVHAAEKVLTDLADLTRGSLVIAASQTIANYWLPPFIKRFRSQFPGV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L V I +G D G+V + + L+ D A A + Sbjct: 121 AITLTIDNTDGVARRINEGLADLGLVEGEIDDPSVSVAPFAEDELVLVVPPDHAWAHDPR 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQAN---IVQEIGHPATLFPMVAAGIGI 239 L VL+++ SG+R + + L++ G+ I E+ + V AG G+ Sbjct: 181 RQPAELGVGPWVLREHGSGTRAIFETTLSQFGLAPRDLAISLELPSNEAVRSAVEAGAGV 240 Query: 240 SILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 +++ L + + +V+ + +R+ +R K S++ A A D++ Sbjct: 241 TVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLI 290 >UniRef50_Q7NCX0 LysR family transcriptional regulatory protein n=1 Tax=Gloeobacter violaceus RepID=Q7NCX0_GLOVI Length = 301 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 71/295 (24%), Positives = 133/295 (45%), Gaps = 6/295 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + +QL+VFV VA+ +F+RA E++ LSQ AVS +V LE + V L +R R + LT++ Sbjct: 1 MNFEQLRVFVAVAEHLNFTRAAEKLSLSQPAVSSAVAALETYYKVPLFNRMGRRIELTNS 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ L +++ E+ + G++ + +SQT+++ +P + ++YP + Sbjct: 61 GQLLLTEAHKVIQEITTIESKLRETKSLQRGELYIGSSQTVASWWLPPQLQRFRQQYPKV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 Q + + + E + G VD G+V L AI + + + L Sbjct: 121 QLKVVSGNTEEIGEWVAAGQVDIGLVEREVRNKSLTFNAIGGDKMAFVVGKQHPLWERTN 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGI---QANIVQEIGHPATLFPMVAAGIGI 239 + L+ + VL++ S R + + I + +I E+ + A G G+ Sbjct: 181 IGLDELKSTRWVLRESGSDVRKFFEYLCFTHNIDADKLDIALELPNCAMTKRAAEVGAGV 240 Query: 240 SILPALALPLPEGSPLVVKR---ITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 ++L + + + PV+ER L+ R ++ S A +A +VR Sbjct: 241 ALLSVPLVEKEIKWGALRSLNTVLKPVMERNFYLISRNSQVTSPAVKAFSSLVRQ 295 >UniRef50_UPI0001C36638 LysR family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36638 Length = 301 Score = 266 bits (681), Expect = 8e-70, Method: Composition-based stats. Identities = 76/296 (25%), Positives = 131/296 (44%), Gaps = 7/296 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +LKQL+ FV VA+ KSFS+A +++ L+Q VS + LE G RL RTT++V L+ A Sbjct: 1 MNLKQLEAFVCVAEVKSFSQAAKKLYLTQPTVSAHIHSLEKELGARLFIRTTKDVELSPA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L ++L + LRD R K+ V AS +++PQ ++ R YP Sbjct: 61 GELLYGNARKMLQLEKNILRDFTRADTPGIQKITVGASTVPGQYILPQILSLFSRTYPGN 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCH--RDSALAVE 180 Q L + V+ + G V+ G E + ++ + Sbjct: 121 QLELMEADSLEVVRMVLDGKVEIGFTGTRLEDPTCVFEPFYYDRLVVITPNAEAYREYEK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQA---NIVQEIGHPATLFPMVAAGI 237 P + K ++++ SG+R + L +G+ N+V I + T+ V+ + Sbjct: 181 TGFPIERFYEEKWIIREEGSGTRKETERYLKEHGVDLRRMNVVATISNQETIKKSVSTAM 240 Query: 238 GISILPALALP--LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 GI+++ + A+ + G L + R+L +V K+ AA VR+ Sbjct: 241 GIAMISSAAVEDYVASGQLLRFPLAEGDIYRKLYMVWSKSNKPGKAARLFIQFVRE 296 >UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B8DKN9_DESVM Length = 699 Score = 266 bits (681), Expect = 8e-70, Method: Composition-based stats. Identities = 89/291 (30%), Positives = 137/291 (47%), Gaps = 4/291 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ F VA+ SF RA + +QS VS + LE GVRL +R R V LT+A Sbjct: 1 MELRDLRTFAAVARLLSFHRAAAELNAAQSTVSARIAALETELGVRLFERLGRRVALTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G++L +L+D + R +L G + V +++ A+ +P IA RR+P++ Sbjct: 61 GERLVQYAAKLID-VEDEARAWVTGESRLRGLLTVRVPESLCAYRLPPVIAAFRRRHPEV 119 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIV-IDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 L + + +RQG D V D GDL EA+ EP L+ LA D Sbjct: 120 ALHLTACTLNGLEKDLRQGITDLAFVMADSVRGGDLNVEALGVEPLVLVAAPHHPLAARD 179 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V + L G LVL R +I+ ALA GIQ E + L VA+G+GI++ Sbjct: 180 RVVARDLHGITLVLSTTDCAYRTVIEEALAAEGIQPAAGLEFSSASALRGCVASGVGITL 239 Query: 242 LPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 LP A+ L G+ + E +++VR + + +S + ++ R Sbjct: 240 LPEAAVRDELRAGTLRALAWADQPFETAVLMVRHRGKWVSPYMDTFMELCR 290 >UniRef50_C0Z4V5 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z4V5_BREBN Length = 298 Score = 266 bits (680), Expect = 9e-70, Method: Composition-based stats. Identities = 75/288 (26%), Positives = 134/288 (46%), Gaps = 1/288 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++QL+ FV V + K+F++A + + +SQ ++S +K LE V LLDRT R++ LTDA Sbjct: 1 MDIRQLQYFVEVVKHKNFTKAAQSLHVSQPSISKMIKALEEELEVVLLDRTERKMDLTDA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + ++L + + G+V++ T+ + L+P IA ++YP I Sbjct: 61 GEMVYSYATKVLQLMEGMASSIAELRNVERGRVKLGMMPTVGSFLLPNVIALFKKQYPGI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + + + QG +D + + P + +L+E + HR+ LA D Sbjct: 121 DIEMKEYSAKLLEIQMEQGSIDVALTVLPMDQEKFEAVPLLAEDLVAIVHREHWLAGVDE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V + L+ +L ++ A +G + N+ + MVA +GIS++ Sbjct: 181 VSLEQLKDEAFILFTEEYAMHDVVRHACKLSGFEPNVAYMSSLWDFVGEMVATQLGISLI 240 Query: 243 PA-LALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 P + L G V PV++ Q L+ RK LS A +A V Sbjct: 241 PRSIVRRLNNGQLHTVNISYPVIDWQYALIYRKEGYLSHATKAFISFV 288 >UniRef50_A6VX33 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6VX33_MARMS Length = 293 Score = 266 bits (680), Expect = 9e-70, Method: Composition-based stats. Identities = 77/295 (26%), Positives = 144/295 (48%), Gaps = 4/295 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + +L F+ VA+ SFS AG+++ ++Q AVS + LE+ GV+L DR R+V LT+A Sbjct: 2 IDIAELLTFIKVAETSSFSEAGDQLFVTQPAVSKRIASLESSLGVKLFDRIGRQVQLTEA 61 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G +L + ++ ++L R Q +SG++R++ I H +P+ + +P+ Sbjct: 62 GIRLLPKARKMAEDLQDIKRSMTLQMQDVSGELRISTGHHIGLHRLPKSLKRFQENFPNA 121 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDL-QCEAILSEPFFLLCHRDSALAVED 181 Q + + + + +G + GI+ L + I S+P + +D LA + Sbjct: 122 QLEIEFVQSEEAYQDVLKGRAELGIITLSNKENPLIESLPIWSDPLTCVVSKDHPLARYN 181 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V L VL + + +R + + A + G++ + + L +V G G S+ Sbjct: 182 NVSLIELAQHACVLPNKNTFTRQIAEQAFGKQGLKPQVRMNTNNLEILAMLVHIGWGWSL 241 Query: 242 LPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 LP+ L + +V+ VER+L ++ K R+LS AA A ++++ G +L Sbjct: 242 LPS---TLVDEKLVVLNLPDLNVERKLGVIHHKQRTLSRAAVAFIELLKSDGTSL 293 >UniRef50_B8CTJ9 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CTJ9_SHEPW Length = 295 Score = 266 bits (680), Expect = 9e-70, Method: Composition-based stats. Identities = 64/292 (21%), Positives = 132/292 (45%), Gaps = 2/292 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +K L FVT+ + +++RA E++ L+Q ++ ++ LE + G LL R ++V+ T Sbjct: 1 MNIQIKNLHCFVTLVEMGNYTRAAEKLHLTQPTLTKMIQRLEENLGQPLLIRNNQKVIAT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+ L ++++ + + D + +G++R+ + +I + +A+ ++YP Sbjct: 61 EAGRALICTSQQIVGQWHRLREDLNSLNGLQTGQLRLGVCPMMGEMII-ELVAQFRKKYP 119 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDP-GPVGDLQCEAILSEPFFLLCHRDSALAV 179 ++ + + +++ +D P + + P ++ LA Sbjct: 120 GVELSIQELGGFGAEQALLNDSLDLTFTALPTTHTQEFDSLELRGYPLLACLPKEHPLAE 179 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 +D + WQ L +L + LI ++ N+ + G + MV A +G+ Sbjct: 180 KDNIGWQDLAPYPFILYNDDFSLTKLIHRLSRSANVELNVAAQSGQWDFIAAMVEAKMGV 239 Query: 240 SILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 +ILP LV K + P + L L+ RKN L+ AA ++ R+ Sbjct: 240 AILPKPICQKVNSDSLVYKALKPQLTWDLALIWRKNLPLTPAASTFINLSRE 291 >UniRef50_Q5WCI6 LysR family transcriptional activator of glutamate synthase n=6 Tax=Bacillales RepID=Q5WCI6_BACSK Length = 301 Score = 266 bits (680), Expect = 9e-70, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 128/291 (43%), Gaps = 2/291 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++QL F+ VA+ + + A + ++QSAVS + LE+ GV L R R V LT Sbjct: 1 MEIRQLLYFMEVAKREHVTEAAAALHVAQSAVSRQIFNLESELGVDLFIREGRRVKLTPI 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ R++ ++ ++ R+ G +RVA +++A+ +P I ++YP+ Sbjct: 61 GKIFLERIKHAMNVIDDAKREVQEYLDPKKGTIRVAFPISLAAYTLPTAIYAFRKQYPEA 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVID-PGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 +F L + +++ + +GD + ++ P + + +E L LA Sbjct: 121 KFQLKQGLYRELIDGVIKGDYNMALIGPVPMEEKKITPRILFAERIVALLPIHHPLAKSA 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + L+ VL R L+ A + G I E L +V+AG+G+++ Sbjct: 181 EINLLDLKNDPFVLLPEGFVFRDLVINACSEIGFVPQIAFEGDDIDALKGLVSAGLGVTL 240 Query: 242 LPALA-LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 +P + + S + + P V R + ++ R L E ++ +++ Sbjct: 241 MPEVTLVDNTPRSTVKIPLSEPNVTRTVGVITPTERGLLPTEELFYEFLQE 291 >UniRef50_B8FZV1 Transcriptional regulator, LysR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FZV1_DESHD Length = 301 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 72/296 (24%), Positives = 145/296 (48%), Gaps = 6/296 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +Q++ FV+V + ++FSRAG+ + L+Q +S + +LE V+L DR++REV+ T A Sbjct: 1 MDFRQIEAFVSVYRLRNFSRAGKALFLTQPTISSHISDLETELEVKLFDRSSREVMPTGA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G LL+ + + + +Q+ G++ +AAS +L+P+ + + P+I Sbjct: 61 GDIFYQYAVNLLETRDCAISSLNQHNRQIEGRLEIAASTIPCQYLLPKLMIGFQKINPNI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 +F++H V++ +R+ GIV L E + + L+ RD A + Sbjct: 121 RFLIHQGDTNQVIKKVREKKYQVGIVGTRTDEDKLDYEILTKDRLVLIAARDYIEAADSP 180 Query: 183 -VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQA---NIVQEIGHPATLFPMVAAGIG 238 + ++L + +L++ SG+R + AL GI +V E+ + + V+ G+G Sbjct: 181 CIAVESLLKKQFILRERGSGTRDTFETALKEKGIDPDTLKVVAEMNNTEAIKHAVSEGLG 240 Query: 239 ISILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 ++++ +L++ L + +ER LV +N+ LS + A + + + Sbjct: 241 VAVVSSLSVGNELKSEAFQAFSIDGLELERSFYLVTYRNQPLSPSVAAFREFILNY 296 >UniRef50_A3VLP1 LysR family transcriptional regulatory protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VLP1_9RHOB Length = 325 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 72/294 (24%), Positives = 136/294 (46%), Gaps = 5/294 (1%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 L+QL+ F+ VA+E +F+RA ER+G++Q +S + LE+ G +L R+ R V LT Sbjct: 9 KVELRQLRYFLAVAEELNFTRAAERMGIAQPPLSQQIISLEHQLGAKLFIRSCRRVKLTA 68 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 G +L R+++ + +G++ + + + L+P + +P Sbjct: 69 EGIELQAYARRIINTTMLATESIRSIANGKNGQIALGSVCSAIHSLVPHILPPFAALHPG 128 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 ++ L + + ++ + +D IV +P + + + +EPF +R+S LA + Sbjct: 129 VRVHLQEMTVKEQFRALNEERIDIAIVREPMATTEFATQPLFTEPFVAAVNRNSPLARMN 188 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDA---ALARNGIQANIVQEIGHPATLFPMVAAGIG 238 + + + LV Q Y S +R D AL G + N+V E +L +VA+GIG Sbjct: 189 RLSLEQIAREPLV-QVYRSANREYSDHMFSALMEQGYELNVVCEASDMHSLLGLVASGIG 247 Query: 239 ISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 +S++PA + + + + V V L L +L+ + + V D Sbjct: 248 VSLVPASLVNIQTANVIYVPLSDDVQSSTLSLAWNPE-ALTPSMDQFLKSVSDY 300 >UniRef50_P0ACR6 Uncharacterized HTH-type transcriptional regulator yeiE n=127 Tax=Proteobacteria RepID=YEIE_ECO57 Length = 293 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 7/291 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ +L+QL+VF V + S ++A + LSQSAVS ++ +LE GV+L DR + +V+ Sbjct: 1 MHITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVN 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 + G+ L R LL++ + ++ ++ +G +R+ AS TI +++P IA YP Sbjct: 61 EHGRLLYPRALALLEQA----VEIEQLFREDNGAIRIYASSTIGNYILPAVIARYRHDYP 116 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + L Q VM+++ VD G + P ++ E L + + S LA Sbjct: 117 QLPIELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLEDELVVFAAPTSPLA-R 175 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V + L A +L++ SG+R ++D L + + + E+G+ + V G+GIS Sbjct: 176 GPVTLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMELGNSEAIKHAVRHGLGIS 235 Query: 241 ILPALALP--LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 L + L G+ V P + R L + + + LS A D Sbjct: 236 CLSRRVIEDQLQAGTLSEVAVPLPRLMRTLWRIHHRQKHLSNALRRFLDYC 286 >UniRef50_C3LMU4 Transcriptional regulator, LysR family n=65 Tax=Gammaproteobacteria RepID=C3LMU4_VIBCM Length = 296 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 69/288 (23%), Positives = 128/288 (44%), Gaps = 2/288 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++QL+ FVTVA+ +SF+ A +++ ++Q A+S S+K+ E GV L R R+V LT Sbjct: 8 MEVRQLRHFVTVAEWESFTLAAQQLHIAQPALSISIKKFEQQLGVTLFKRDERKVALTHE 67 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L +R+L ++N + + G+VR+ A + ++ PQ I +P++ Sbjct: 68 GEVLLEHAKRILQQVNDAQLAVDELKGVVKGEVRLGAPSMMGSYFFPQIIMAFKSHFPNL 127 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + Q + + G++D G++++ DL + +LS + ++ LA + Sbjct: 128 KMTVIEAGTQSIRRMLLSGELDIGVILNHDLPDDLAADPLLSSQMVAVVGKNHELAERRH 187 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + +LV+ R ID + A+ E + +V I+ L Sbjct: 188 LTFAEFFEHELVMFKPGYFHRDFIDKVCREHKFTADFSFETNLLPMILSIVKHEYAITAL 247 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 L L + P V L L RK LS A + V+ Sbjct: 248 --LELVTSNEPEVKAIPFEPPVWLDLALAWRKEGYLSNADRTFIEFVK 293 >UniRef50_A8ZUD0 Transcriptional regulator, LysR family n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUD0_DESOH Length = 298 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 75/292 (25%), Positives = 131/292 (44%), Gaps = 5/292 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L +L+VF V + +SFSRA + LSQ VS VK+LE+H G RL+DR R V T A Sbjct: 1 MDLWRLRVFCKVVELRSFSRAAAGVRLSQPTVSSHVKDLEDHFGCRLIDRLGRSVAPTPA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L + LL + + +++G++ + S + H++P I R YP + Sbjct: 61 GELLYRQASDLLARYDGIEAEMAGYQGRVAGRLVIGGSTIPAGHILPGLIGAYRRAYPQV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + V I G + +V + + L++ ++ A Sbjct: 121 TVCLLVGDTEKVFFDILSGKAELAVVGGRTADRRIVQQPFLTDEMRVVVPASHPWAGRKT 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGI---QANIVQEIGHPATLFPMVAAGIGI 239 V L ++++ SG+R ++ +LA G N+V E+G + + +GIG+ Sbjct: 181 VAVADLAKEPFIVRERGSGTRSALEESLAARGAGIEGLNVVAELGSTEAVVQGIKSGIGV 240 Query: 240 SILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 S+L ++A+ + G + + R L ++RS S AA A ++ Sbjct: 241 SVLSSMAVAADVRAGMLKALALRGVKLTRVFYLAFLRDRSQSPAANAFCTLI 292 >UniRef50_B6R6F6 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R6F6_9RHOB Length = 320 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 80/292 (27%), Positives = 143/292 (48%), Gaps = 3/292 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M +LKQL+ F T+A+ SFS+A E ++QS +S S+K+LE G LLDR+ R +VLT Sbjct: 7 MLPTLKQLQYFKTLAKHLSFSKAAEACFITQSTLSASIKQLEGILGCELLDRSGRTLVLT 66 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+ + + LL + ++ + L G+ R+ +++ L+P+ + + YP Sbjct: 67 EAGESVLEKASLLLRDAEDLVQGVQAQNKPLCGRFRLGVIPSVAPFLLPRFLPQLRDLYP 126 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++Q L + + +M ++R+G +D ++ P + I S+ F+L LA Sbjct: 127 ELQLFLREDISRNLMIALREGRIDAALMALPYDTTGFESAEIGSDAFYLAVPGAHPLAGL 186 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V + L L+L + R + AA + AN + +TL MV GIG++ Sbjct: 187 SEVLMEDLANEVLLLLEDGHCLRNHVLAAAGGRMLTANEDVQATSLSTLVQMVDNGIGVT 246 Query: 241 ILPALALPL---PEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 ++P +A+ S ++K P R + +V R+ S A+ L + Sbjct: 247 LVPRIAVDADIDRGTSLKLIKIADPKARRTIGMVWRRKSSFEGNAKLLCKAL 298 >UniRef50_B3DZ70 Transcriptional regulator, LysR/CysB family n=5 Tax=Verrucomicrobia RepID=B3DZ70_METI4 Length = 309 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 64/287 (22%), Positives = 130/287 (45%), Gaps = 2/287 (0%) Query: 8 LKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLA 67 LK F + + +SFS+A + +SQSAVS ++ LE GV L++R +R+V LT G+ L Sbjct: 6 LKAFRDLVESRSFSKAAQLNKISQSAVSQQIRSLEERFGVPLIERGSRKVQLTKEGEILY 65 Query: 68 LRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLH 127 ++D + +SG +RV+A ++ H +P + + + YP++ + Sbjct: 66 HAAREIVDIYTRIEAKITEIKASVSGNIRVSAIYSVGLHELPYYLKKFLKLYPEVNIRVE 125 Query: 128 DRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQA 187 R + V + I +G+ D GIV P P ++ E + ++C + V + Sbjct: 126 YRHSRQVYQDIIEGNSDIGIVAYPSPRKLIKIEPFRKDRMVVICSPTHRFSQLKEVGLEE 185 Query: 188 LQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALAL 247 + + +R +D G++ V E + T+ V G++I+P + Sbjct: 186 IAREGFIAFSSDMPTRRELDKLFRDRGLEFRPVMEFDNVETVKRAVEIDAGVAIVPMATI 245 Query: 248 --PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 + G+ +++ P R + ++ + R L+ A ++++ + Sbjct: 246 TQEIRNGTLKMLELSGPPCYRPIGILYKSGRMLTPAMRKFIEILQKE 292 >UniRef50_C2BX95 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2BX95_LISGR Length = 297 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 65/290 (22%), Positives = 122/290 (42%), Gaps = 2/290 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QLK F+ VA + ++A E + ++QSAVS + +LE G++L DR R + LT Sbjct: 1 MELRQLKYFMEVASFEHMTQASENLHVAQSAVSRQITKLEEELGIKLFDRVGRNMQLTTV 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ +++ +EL G VR+ ++++ ++P I+ YPD+ Sbjct: 61 GEDFLNQVKVAYNELLKAEAIVTEYSDPTKGSVRIGLPNSLASKVLPAVISAFRAEYPDV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVID-PGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + + + + + G++D + P ++ E ++ LA Sbjct: 121 TYHFVEGSNAELKQLLLDGEIDITFLSPVPVTDDSVEAVKFFDEKLKVIFPATHPLADRY 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V + L K +L ++ A + I +I + T+ +V AG+GISI Sbjct: 181 NVSLEELAAEKFILYPPNFDLFKIVTTAAEKKAISLDIAFQSQDFYTIQGLVGAGLGISI 240 Query: 242 LPALALPLPEGSPLVVKRITP-VVERQLMLVRRKNRSLSTAAEALWDVVR 290 LP + L + + R + LV K R LS + + ++ Sbjct: 241 LPEMILDGTIFKDTKALPLRNKELRRSVGLVVTKKRQLSPTEKLFYQFIK 290 >UniRef50_Q7W708 Putative LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W708_BORPA Length = 298 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 77/273 (28%), Positives = 125/273 (45%), Gaps = 2/273 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 LKQ++ FV VA+E+SFSRA ER+ +SQ +S +K LE L R R + LT A Sbjct: 1 MDLKQMRYFVAVAEERSFSRAAERLHISQPPLSQQIKALEEELNAPLFHRLPRGISLTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L +L + ++T ++ + G VR+ + AHL+P + + R P Sbjct: 61 GAALLKSSRAILANVRLAAQETTQIAAGMLGTVRMGTVSSALAHLVPYILTQVKRSMPGS 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L + + ++ + ++D G+V P DL+ IL EPF+ LA + Sbjct: 121 KVELTEMSSREQTLAVLRDELDIGLVHTPIDTADLRTRQILREPFYAAVPSQHPLASREA 180 Query: 183 VPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 VP L + V ASG + + G I H +T+ MVA G+G++ Sbjct: 181 VPVAELASEEFVFFPRTLASGLFDKMVSLCMNAGFSPKIHHTARHQSTMLQMVAMGLGVT 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRR 273 I+P + +GS + + +L L+ R Sbjct: 241 IVPRSLQRIYKGSAVFLPLTGTPHYLELSLIWR 273 >UniRef50_Q21B31 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q21B31_RHOPB Length = 364 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 74/288 (25%), Positives = 140/288 (48%), Gaps = 2/288 (0%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 S +Q++ F+ +A+ F+ A + + +SQ ++ + +LE G+RL DR R V LT AG Sbjct: 6 SFRQVRAFLALARHLKFTSAAQELNVSQPTLTVQINQLEQQLGIRLFDRDKRRVELTPAG 65 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 + + +ERL ++ L + G +RVAA +++A +P+ I + + P I Sbjct: 66 RNILPLMERLSLNMDEVLLAASDLTYAKRGIIRVAALPSVAASFLPRGIKDFREQNPGII 125 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSAL-AVEDY 182 + D + +++ ++ +VDFGI ++ + LS+ + L Sbjct: 126 IDVWDVVGEEIIKLVKAEEVDFGIGTHFSADKSIKVQDYLSDSLCAFFPVEHPLNTAASV 185 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V + + LV+ S R L + ++AR G + NIV E + +T M AG+G++IL Sbjct: 186 VYVRDVASCPLVVTRKNSSVRVLFERSMAREGCELNIVMETNYMSTALSMARAGVGVAIL 245 Query: 243 PALALPLPEGSPLVVKRITPV-VERQLMLVRRKNRSLSTAAEALWDVV 289 P+ A+ + L K I P R++ ++ + +R+L A + + Sbjct: 246 PSTAVEAGNMAGLSFKPIDPPHFNRRVGIICKADRTLQPIASHFVEEL 293 >UniRef50_Q2J7C4 Transcriptional regulator, LysR family n=22 Tax=Actinomycetales RepID=Q2J7C4_FRASC Length = 316 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 69/298 (23%), Positives = 131/298 (43%), Gaps = 9/298 (3%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L QL FV VA+ + F+RA +R+ ++Q ++S ++ LE G L +R + LT AG+ Sbjct: 3 LHQLAYFVAVAETRHFTRAAQRVHVAQPSLSQQIRALEQELGTPLFNRARGNISLTPAGE 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 L R+L + + + + G VR+ A+ ++ +P + H+RYP I+ Sbjct: 63 TLLPLARRILTDTETARQRVTELLDLRHGTVRLGATPSLCTGFLPDVLRLFHQRYPGIRL 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGD--LQCEAILSEPFFLLCHRD-SALAVED 181 ++ + + ++ + G +D ++I P D L ++ E L+ D + Sbjct: 123 LVEEGGSRDLVRDLAAGSLDLALIILPLQSSDPALATSPLIRESLVLVSSLDEPPIVAGR 182 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + L+ +V+ R A G + E G + VAAG+G ++ Sbjct: 183 PLTVADLRNHPMVMFRRGYDLREATVTACREAGFEPIFAIEGGEMDAVLGFVAAGLGSAV 242 Query: 242 LPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAA----EALWDVVRDQGNA 295 +P+ V + P ++R + L RR++ + AA LW+ +RD + Sbjct: 243 IPSTVAHRL--GMRVTPFVLPGLQRTIGLARRRDVEPTRAAVELQRVLWEYLRDAAAS 298 >UniRef50_Q4ZQQ6 Regulatory protein, LysR:LysR, substrate-binding n=10 Tax=Pseudomonas RepID=Q4ZQQ6_PSEU2 Length = 304 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 80/287 (27%), Positives = 134/287 (46%), Gaps = 2/287 (0%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+ ++ + VA +F+RA E + +SQ A+S +++LE+ GV+L DRT R VV TDAG+ Sbjct: 15 LRHIRYLLAVADHGNFTRAAEALHVSQPALSQQIRQLESSLGVQLFDRTRRSVVPTDAGR 74 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 R L EL++ R + G++R+ + T S +LI I YP + Sbjct: 75 VYLDHARRCLLELDAGKRALNDVSDLSRGQLRLGVTPTFSEYLIAPLIDRFSALYPGVAI 134 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 +L + P + + E++ +D I ++ + + E L+ + A + + Sbjct: 135 ILTELPLEQITEALISDALDLAIGFAGSHAVEIDSQPLFDEQLCLVMAKP-ASEKQAALT 193 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPA 244 + LQ + L +R L+DA + I E A L +VA G +ILP Sbjct: 194 LEDLQALRFALLAPGFATRQLLDAWCQMQNFKPIIGLEANSIAILLKVVAQGRMATILPD 253 Query: 245 LALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 A+ + V+ I + R + L+RRKN S AA+A +V D Sbjct: 254 -AIVRKQPGLCEVQTIPALPGRTVALLRRKNGYQSAAAKAFAKLVSD 299 >UniRef50_C1ZI46 Transcriptional regulator, COG0583 n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZI46_PLALI Length = 292 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 125/291 (42%), Gaps = 3/291 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L QL+ F+ A+ KSF+ A +SQ ++S + +LE G L +R+ R V LT++ Sbjct: 1 MELHQLRYFLKAAELKSFTLAAAECFISQPSLSQQIIKLEQELGQPLFERSGRGVELTES 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L R +++ ++ R+ +G++ + A TI+ +L+PQ ++ P + Sbjct: 61 GKLLQSRAGQIVSLVDQARREITD--DGETGQLTIGAIPTIAPYLLPQIVSRFREVVPRV 118 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 +H+ + ++ ++ G+ D I P + L+ E + E +L L+ Sbjct: 119 TLKIHEDVTEQCLKKVQAGEWDLAIAALPVRIEHLEVEPLFDEELWLAVPPGHRLSHLTE 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 VP + + L+L A + R + + T+ +V+ G G+S + Sbjct: 179 VPVEEIDRETLLLLGEAHCLTEHVAQYCRRKDMAPLETGRLAQLTTIMELVSRGQGVSFI 238 Query: 243 PALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 P + + + +R + LV R + + DV+R + Sbjct: 239 PNMCKAFDREGRCAYRPLQGDRPQRTIALVWNSYRFQTLLLKRALDVIRRE 289 >UniRef50_B7RS92 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Roseobacter sp. GAI101 RepID=B7RS92_9RHOB Length = 300 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 87/291 (29%), Positives = 140/291 (48%), Gaps = 2/291 (0%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N +L + + ++QE+SF A +++GLS SA+S + LE G RL DR TR V +T Sbjct: 5 NPTLLDFQAVLILSQERSFRAAADQLGLSPSALSRQITSLEARLGSRLFDRDTRSVEITV 64 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 AG A ER+++ L + G G++ +A +I+A L+PQ + +P+ Sbjct: 65 AGSAFAQIAERIINTAEDGLAEFGSYQSAQRGRLTIAGLPSITASLLPQILRNFTADHPE 124 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPG-PVGDLQCEAILSEPFFLLCHRDSALAVE 180 I + D V++++ G D G L E ++ + F L D LA + Sbjct: 125 IDLKIIDALSGSVLDAVDSGQADIGFTAGTVTARSRLAFEPLMEDEFVALGMPDGPLAED 184 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 W+ L ++ + + R LID R G + E+ H AT +V+AG+GI+ Sbjct: 185 RAYGWEELVAMPFIVMETGTSVRELIDGTCQRFGHSLSPRFEVAHLATAGALVSAGLGIT 244 Query: 241 ILPALALPLPEGSPLVVKRITP-VVERQLMLVRRKNRSLSTAAEALWDVVR 290 +LP L L + V++ I+ R++ LVRR R+LS A A VR Sbjct: 245 VLPRLTLAILRSETFVIRDISDFGTRRRIGLVRRSGRTLSPTATAFLKYVR 295 >UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=Comamonas testosteroni RepID=D0J615_COMTE Length = 306 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 99/299 (33%), Positives = 152/299 (50%), Gaps = 2/299 (0%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N S K L+ V ++Q KSF +A + LSQSA+S + +E G RL +RTTR V LTD Sbjct: 5 NLSTKDLRAVVALSQTKSFGQAALLVHLSQSALSALIARVEAQIGARLFERTTRAVELTD 64 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 AG + +L + LR Q +G V VAA +++A L+P+ AE R +P Sbjct: 65 AGHVFIAHAQEILRDTQRALRAVTDTVQLRTGSVTVAALPSLAASLLPKVFAEFTRIHPG 124 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE- 180 ++ L D + +R G VDF + DL E ++ + FFL+C D L+ Sbjct: 125 VRLSLLDTLSGPAFDLVRDGKVDFALTAADPKQEDLAYEQLMEDQFFLICPDDHPLSKHA 184 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V + V ++ R IDA L G+ V E+ H AT+ +V+AG+GIS Sbjct: 185 GPVAIENTLDYPHVSMPSSASVRQYIDADLHSKGLYFAPVFEVDHIATIGALVSAGLGIS 244 Query: 241 ILPALALPLPEGSPLVVKRITPV-VERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 LP A+ L + LV ++P ++R L +V R++ S+AA+AL ++R + L + Sbjct: 245 ALPETAVSLLQAGRLVQIPLSPPGIQRPLGMVMRRHAPRSSAAKALEALIRASLHNLAS 303 >UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I3E5_THIIN Length = 301 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 69/300 (23%), Positives = 124/300 (41%), Gaps = 5/300 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ FVT+A++ SFSRA ER+ +SQ +S +K LE+ G RLL+R+ R V LT A Sbjct: 1 MELRQLRYFVTIAEQGSFSRAAERLHISQPPLSTQIKALEDEIGARLLERSNRGVTLTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G + +L +L + + + +G + + ++P + RYP + Sbjct: 61 GAAFFEDIRSVLAQLEHAVERVRQAERGDAGTLSIGFVSIADFGILPPTLKSFRARYPQV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 LH+ + +R ++D I + P L +L EP L + E Sbjct: 121 DVQLHELTTDAQIRELRAAELDLSIGLAPVDEPGLTFTPLLQEPLMLAAPTTHPVLQEGS 180 Query: 183 --VPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 V +AL ++ G L + G I Q T+ +V+ G+G Sbjct: 181 GAVDLRALAKEPFIVPPRNIGPGLYDLTLSLCQAAGFAPRITQHARQMQTVIGLVSCGMG 240 Query: 239 ISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 ++++PA L + +L +++ S + + +R+ L+ Sbjct: 241 VALVPASLRQLKRPGVQYRPLLGQPATIELGILQLSQTS-NPLRDNFNQALREAALHLLT 299 >UniRef50_A8VYP9 Conserved repeat domain n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VYP9_9BACI Length = 300 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 75/295 (25%), Positives = 132/295 (44%), Gaps = 5/295 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L ++ F VA+ SFS A + + LSQ V+ VK LE+ L RT EV LT A Sbjct: 1 MNLDHVRTFQAVARHGSFSAAAKSLYLSQPTVTSQVKSLEDDLNAILFVRTKHEVSLTPA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L + + + G + +L G + AS T+ ++P + +P I Sbjct: 61 GKVLDRYANDVFNLCMEARNEIGALEGELCGMLYAPASLTVGESVLPLMLHAFKAAHPQI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + ++E +R G+ + G++ L+ E + + L D +A + Sbjct: 121 ELKAEVMNSSKIIELVRLGEREMGLIEVDVDQAGLETEPFMEDELVLFARYDDPIAEKSA 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQA---NIVQEIGHPATLFPMVAAGIGI 239 + + + L++++ SG+R + + L GI ++V EIG+ + V AG+G+ Sbjct: 181 ISAEEIPQFSLIMREQGSGTRTVFEEGLKTKGIHIEDCHLVLEIGNTEAIKTAVEAGLGV 240 Query: 240 SILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 S+L + L G V+ + RQL LV K +SLS D++R + Sbjct: 241 SVLSKNTIRKELESGLFQVISIKELMFTRQLSLVYEKKKSLSAVTMRFMDLIRSR 295 >UniRef50_C9PJ12 Putative transcriptional regulator protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PJ12_VIBFU Length = 308 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 72/296 (24%), Positives = 140/296 (47%), Gaps = 3/296 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ S +QLK F+ +A+E++F+ A +++ ++QSA+S +K+L L +R R +VLT Sbjct: 1 MDISYRQLKAFIALAEERNFTYAADKVHITQSALSQMMKKLAQQLSCELFERKGRTIVLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG L +++ L +++ + + V++ T+ A L P+ + + +RYP Sbjct: 61 EAGHHLYQEARFIVNRLEKLVQENHDRQHGYNKSLVVSSLYTLCASLAPKTLNDLKKRYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 D F L + + S+ +G D GI +P DL + + + +C D LA + Sbjct: 121 DFTFRLIEERVDDITHSVLEGRADIGINTNP-NHPDLNFDLLFRDSLCFVCRADHPLAEQ 179 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W+ + + R L D A +R G+ + H +TL M+A+G+G + Sbjct: 180 QDISWEQAHQYATIGVSPGNSLRTLADEAFSRVGLTYDPEFSASHTSTLLGMIASGLGST 239 Query: 241 ILPALALPL-PEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 IL + L + + + PV R + L+ RK+ + +++ + Sbjct: 240 ILSSTIAGLNASDTIRFIPIVQPVQFRLVGLITRKDTQR-ALVDEFALILKKHVSD 294 >UniRef50_Q1DCG4 Transcriptional regulator, LysR family n=2 Tax=Cystobacterineae RepID=Q1DCG4_MYXXD Length = 302 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 73/292 (25%), Positives = 129/292 (44%), Gaps = 2/292 (0%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+ LK+F V + SFSRA + ++QSAVS ++ LEN +LL R+ R+V T AG+ Sbjct: 3 LESLKMFCDVVETGSFSRAAQLNHVTQSAVSQQIRALENRYEQKLLSRSARQVTPTPAGE 62 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 +L + +L ++ +++G V+ ++ H + + + +P + Sbjct: 63 RLFRGCKEILARFAEVEQEIREQATEVAGTTTVSTIYSVGLHELNSVQKQLLKSHPKVNM 122 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 L+ R V + + G + GIV P P + + ++C D A + V Sbjct: 123 RLNYRRNDQVYDDVILGAAEIGIVAYPQPRAGVDILPFRDDKLSVVCAPDHPFATKQKVS 182 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPA 244 AL G + D + +R +D I N V E+ + T+ V G+G++ILP Sbjct: 183 LTALSGVPFIAFDREAPTRKALDRLFREKSIDINPVMEMDNVETIKRAVEMGLGVAILPM 242 Query: 245 LAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 + GS + V R + L+ RK + L A+ A+ + + N Sbjct: 243 STAQGEVKGGSLVAKPFAEGPVSRPIGLLIRKGKYLDRASAAVLEAFKAASN 294 >UniRef50_A6SXB4 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SXB4_JANMA Length = 302 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 101/300 (33%), Positives = 166/300 (55%), Gaps = 1/300 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+ FVTVA+ F+ A E +G+SQS++S V++LEN G+RL DR TR + LT Sbjct: 1 MNITLRQLRAFVTVAETGKFTLAAELLGVSQSSLSLLVRDLENLLGLRLFDRHTRRLELT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 DAG L ++ L +L S + ++ + G+V +AA +A +IP + +RRYP Sbjct: 61 DAGHDLLPVAQKTLMDLLSVVENSRDLLALKKGRVTIAAGSLHAATVIPDLLKSFNRRYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ ++ D ++ V E I G VD GI + + + I + + +L H++ L + Sbjct: 121 GIRVIVEDVAERQVRELIVAGTVDVGIGMTLDGDNSMLAQVIGRDKYAVLMHKEHQLMRK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + WQ + + +L S R +D LAR GI E+ P T+ MV AG+G++ Sbjct: 181 KTITWQDIAATQPILLKPPSLIRTYLDQHLARVGITLTPAYEVALPWTMTGMVRAGVGVA 240 Query: 241 ILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 I+ LP+ E L ++ I+ PV+ER+L ++ R LS AA++L + ++ +AG Sbjct: 241 IVTTGVLPVAERMGLELRTISAPVIERELAVLTRAGYPLSPAAQSLRTHLLEELPQAVAG 300 >UniRef50_Q01RY1 Transcriptional regulator, LysR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01RY1_SOLUE Length = 307 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 77/273 (28%), Positives = 134/273 (49%), Gaps = 5/273 (1%) Query: 8 LKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLA 67 L+VF VA+E SF+RA ER+ L+Q AV+ VK LE G+RL DRT + +VLT AG+ L Sbjct: 6 LRVFRIVAEELSFTRAAERLFLTQPAVTMQVKNLEEELGLRLFDRTGQRIVLTPAGRILD 65 Query: 68 LRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLH 127 +R+ RD + + G++ + AS TI+ +L+P+ E +P IQF + Sbjct: 66 DYTKRIAALCGDAERDLAVLKGETRGRLALGASTTIAQYLLPRLAGEFLAAFPAIQFSII 125 Query: 128 DRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQA 187 ++ ++ G + G++ P D++CE + + L+ A + A Sbjct: 126 SGNTSDIVAALADGRIGLGLIEGPAGRSDVKCEPFVEDEIVLVTPPAHEFAAGGELDPAA 185 Query: 188 LQGAKLVLQDYASGSRPLIDAALARNGIQ---ANIVQEIGHPATLFPMVAAGIGISILPA 244 L+ A ++L+++ SG+R +++ AL R + I E+ ++ +AAG+G+ + Sbjct: 186 LKAASIILREHGSGTRQVVEEALKRARLDTRGLKITLELDSTESIKSAIAAGLGVGFVSR 245 Query: 245 LAL--PLPEGSPLVVKRITPVVERQLMLVRRKN 275 AL + G V + R V + Sbjct: 246 WALGKEIALGLLRTVPVKGLRIRRHFQFVYLQG 278 >UniRef50_A3IAK3 Transcriptional regulators, LysR family protein n=1 Tax=Bacillus sp. B14905 RepID=A3IAK3_9BACI Length = 304 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 76/293 (25%), Positives = 139/293 (47%), Gaps = 7/293 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L Q+++FV V +F+RAGE + ++QS +SH++ LE+ G+ LL+R + LTD+ Sbjct: 12 VNLLQIEIFVKVVDMGNFTRAGEILAMTQSGISHNISSLESELGITLLNRGRNGISLTDS 71 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+++ + +L E S ++T + +GK+ + + + S+ L+P I+ + I Sbjct: 72 GERIIKHMRNILTEAESIKQETASILGIQNGKINIGSFSSFSSKLLPTIISRFRGEFKGI 131 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + +D + + +G VD G P+ L+ IL++ L LA+ Sbjct: 132 EINFYDGSYDQITRWVEEGKVDIGFTSLSNPLDHLKTIPILNDRLVLTLPIHHHLAINGQ 191 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V + LQG ++ + L + NI + T+ MV G+GI+I+ Sbjct: 192 VKVEDLQGEAFIMPKLGCEV--SVMKFLKEQEVSPNIQFNVEDNQTIIAMVREGLGITIM 249 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALW----DVVRD 291 P LALP +VK + P R++ ++ R + A +A D V+D Sbjct: 250 PELALPY-NLQGTIVKPLLPEPSREISIITRSKKQSLPAVKAFIKTTMDCVKD 301 >UniRef50_B5JV63 LysR protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JV63_9GAMM Length = 307 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 127/293 (43%), Gaps = 3/293 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +++ L+ + +A+ + F RA + +SQ +S +K+LE V L++R ++V+LT+ Sbjct: 1 MNIRDLQYLMALAEHQHFGRAADACHVSQPTLSTQIKKLEGELNVTLVERDNKKVMLTEV 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G + R +L ++ + SG++ + TI +L+P + +R+PD+ Sbjct: 61 GNAVVERTADILRGVDEIRDIALQASDPESGRLALGLIPTIGPYLLPYAMRAIKKRFPDL 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L++ +++ ++ G +D I+ P + I +E F + LA Sbjct: 121 RIYLYEAQTADLVDMLKSGKIDAAIMALPVDDDRIDNIPIYNEAFLAALPFNHPLADRSL 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L+ ++++L + R G TL MVA+G G++++ Sbjct: 181 LNPSELKDSEMMLLEDGHCLRDQALEVCQNMGASEMSGFRATSLETLRQMVASGAGVTLM 240 Query: 243 PALALP---LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 P LA + +V P +RQ+ + R + + L + ++ Sbjct: 241 PTLAAETNQIEGSDVAIVPFEEPQPQRQVGIFFRPSSPRKALFKELGQAIAER 293 >UniRef50_Q3MEY8 Transcriptional regulator, LysR family n=1 Tax=Anabaena variabilis ATCC 29413 RepID=Q3MEY8_ANAVT Length = 295 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 72/290 (24%), Positives = 127/290 (43%), Gaps = 3/290 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ FVT+A+E F +A ER+ ++Q +S +++LE G L RT R V LT+A Sbjct: 1 MELRHLRYFVTLAEELHFGKAAERLHIAQPPLSQQIRQLEIELGFDLFHRTKRTVRLTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ ++++L +L ++ + G++ V + + +++P + P + Sbjct: 61 GQVFLGEVQQILQQLQQAIQLGQTSSRGEVGQLIVGFVSSAAYNILPIILRNFRACTPAV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + LH+ +E +R+G +D G + P E I E + LA + Sbjct: 121 KLELHEMTTDQQLEWLREGGIDIGFIRPPVEENIFNWETIFQESLMVALPETHLLANQFN 180 Query: 183 VPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 +P +L +L A G LI + + G ++ QE T +VAA +GI+ Sbjct: 181 IPLTSLGNESFILFPRKIAPGLYDLIISLCQQAGFSPHVAQEAIQMQTTVSLVAADMGIA 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 I+PA L + + L + RKN + S + VR Sbjct: 241 IVPASLQNLQRTGVVYKNIQEATAKVALAMTWRKNET-SPTLQRFLHTVR 289 >UniRef50_Q1N6N4 Transcriptional regulator, LysR family protein n=1 Tax=Bermanella marisrubri RepID=Q1N6N4_9GAMM Length = 300 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 68/298 (22%), Positives = 136/298 (45%), Gaps = 14/298 (4%) Query: 8 LKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLA 67 L+ F+ VA+ +SFS+A R+ L+Q AVS + LE+ +L DR R+ LT AG+ L Sbjct: 6 LQAFIAVAETESFSQAAHRLHLTQPAVSKRIAMLEDTLDCQLFDRLPRKATLTPAGEALM 65 Query: 68 LRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLH 127 + + ++ EL + + +SG +R+ S I H +P + + H YP ++ + Sbjct: 66 PKAKHIVSELLEIKTELASLSGDVSGTLRIGTSHHIGLHHLPHILRKFHSTYPQVKLAMQ 125 Query: 128 DRPQQWVMESIRQGDVDFGIVIDP-GPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQ 186 + E++ G++D P L +AI +P +C L+ + + + Sbjct: 126 FLGSEAACEALANGELDIAFATLPLEQDPKLDMQAIWRDPLTFVCSHTHPLSKQKNIHLK 185 Query: 187 ALQGAKLVLQDYASGSRPLIDAALARNGIQAN----------IVQEIGHPATLFPMVAAG 236 L + +L + + + +I+AA + + I + T+ M + G Sbjct: 186 DLTQHEAILPEPNTVTFEIIEAAFKKEKLSLQAALPSRYRETISMMSSYMETIKMMASVG 245 Query: 237 IGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 +G ++LP + + L+ + R L +++RK ++L +A +A ++ + G Sbjct: 246 LGWAVLPD---HMAQDKDLIRLNLGIHPYRNLGVLQRKGKTLGSAGKAFLAILPNHGQ 300 >UniRef50_A0JW92 Transcriptional regulator, LysR family n=3 Tax=Micrococcaceae RepID=A0JW92_ARTS2 Length = 306 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 70/285 (24%), Positives = 131/285 (45%), Gaps = 3/285 (1%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 + LK F+ VA+E+ F RA R+ ++Q +S +++LE G L+ RTTR+V LT AGQ Sbjct: 4 RHLKYFIAVAEERHFGRAAARLHMAQPPLSQQIRQLEEQLGTPLMVRTTRKVELTPAGQV 63 Query: 66 LALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFV 125 L R LL EL D ++G+ +G +RV + T + L+P + + R P ++ Sbjct: 64 LLDRGRVLLQELQVLESDVQQVGEGATGVLRVGFTGTATYRLMPIIVQAARRTLPGLRIT 123 Query: 126 LH-DRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 + + + ++ +G +D ++ P G + + + + DS LA + + Sbjct: 124 VQGEMLTPQMEAALEEGRLDAAVLRPPVHSGAIALKLLEQDQLVAALPADSPLAEKGTLE 183 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPA 244 AL + S + A + G Q +VQE +TL +VA+G+GI+++P Sbjct: 184 LAALSEEGFIGYPGYSAVSSIFVDACRKAGFQPRVVQEAKETSTLLSLVASGMGIALVP- 242 Query: 245 LALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 + + + + + L + ++ + A D+ Sbjct: 243 MTSRMFSYQGVAFRPLRNPPPMDLAVAWNSDKE-TPLLRAFLDLF 286 >UniRef50_UPI000178812A transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178812A Length = 312 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 127/296 (42%), Gaps = 3/296 (1%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 + ++QL+ F+ V QE F+RA E++G++Q +SH +K +E+ G+ L DR +++ +T+ Sbjct: 13 DMEIRQLEYFMAVCQELHFTRASEKLGVTQPTLSHQIKAIEDELGMPLFDRIGKKIAITE 72 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 AG L + S + + G++ V L+ + + + H Y + Sbjct: 73 AGFILLKHCHTVFHSFKSVREEIQELQDIKRGRLSVGVLPGELNALVCRLLPDFHEAYSE 132 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 +Q + V E + ++D + I P + + + E +L+ + D LA Sbjct: 133 VQVRVI--SADNVAERLLNNEIDLALTIIPVHDERIVSQLLYKEKLYLVVNADHPLAEGP 190 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V +AL+ LVL R +D+ I EI ++ ++ AG+G SI Sbjct: 191 EVSLEALKDLPLVLFPKNYRCRHQLDSICNLKEIDLRPAIEIDAIESMITLIEAGVGCSI 250 Query: 242 LPA-LALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 L L + +V RQ+ L+ K++ +++ Q + L Sbjct: 251 LSETLMKQWDKPGVKIVNIAENPFLRQVGLIYHKDKYRGQVVLKFTELLHKQISQL 306 >UniRef50_B9MIR3 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=B9MIR3_DIAST Length = 299 Score = 263 bits (673), Expect = 5e-69, Method: Composition-based stats. Identities = 73/300 (24%), Positives = 133/300 (44%), Gaps = 1/300 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN + +QL++F+ +A+ S S A + + ++Q S ++E+ GV L + +R V LT Sbjct: 1 MNITFRQLRLFLALAETGSVSAAAKLMHVTQPTASMQLREVAQAVGVPLYEVVSRRVYLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AGQ LA + E ++ + SG+++VA T + + +P+ + + +P Sbjct: 61 EAGQALARTARAIASEWDAFEQGISGAKGLTSGRLKVAVVST-AKYFVPRLLGSFCKLHP 119 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I L + V+ +R D ++ P L+ ++ P ++ LA + Sbjct: 120 QIDISLEVLNRDHVITRLRANQDDLYVMSMPPGDLPLEDHVLMPNPLVVIAPAGHRLAAK 179 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V LQ + +L++ SG+R DA L + G V E+G + V +G+S Sbjct: 180 KRVALPQLQSERFILREKGSGTRMATDAHLRQLGFAPAAVLELGSNEAIKESVQGQLGVS 239 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 I+ AL ++ ++ Q LV K + LS AE + D+ M R Sbjct: 240 IVSRHALGPHLDGLAILNVQGFPIQSQWHLVWPKGKRLSPIAEVFRGHLMDEAAGWMQSR 299 >UniRef50_B1M0B1 Transcriptional regulator, LysR family n=24 Tax=Proteobacteria RepID=B1M0B1_METRJ Length = 308 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 86/293 (29%), Positives = 146/293 (49%), Gaps = 1/293 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ +L+Q++ FV+V Q SF+RA + LSQ A++ ++ LE RLLDRT+R V T Sbjct: 1 MDLNLRQVRAFVSVVQAGSFTRAAALLNLSQPALTVQIRRLEETLDARLLDRTSRTVAPT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ L +R+L +L++ + DT + + G VRVA + +A ++ I +P Sbjct: 61 RLGRDLLPVFQRVLRDLDAVVVDTRDLAARRHGVVRVATLPSFAASVLSDAIVRFRAEHP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + F + D Q V++ +R + D GIV ++ + ++ D + Sbjct: 121 AVTFRIKDVIAQRVLDLVRGEEADLGIVGGDVRDPEIGVLHRTRDALHVIYPADHPIGAL 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V AL L+L D A+ R ++D A +G + E + T MV AG+G++ Sbjct: 181 PRVTIAALAEHPLILMDPATSVRAVVDRAFIGSGRLPRVACEATYMMTAVSMVRAGLGLT 240 Query: 241 ILPALALPLPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 ILP A + L + I P+ ER + L+++ R++ AAEA +V D+ Sbjct: 241 ILPGAAREIRAEPLLRSRAIDDPLFERPVCLIKKAGRTMPPAAEAFCRMVADR 293 >UniRef50_D1WWA8 Transcriptional regulator, LysR family n=7 Tax=Streptomyces RepID=D1WWA8_9ACTO Length = 310 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 73/279 (26%), Positives = 123/279 (44%), Gaps = 5/279 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ F+ VA+E F RA R+ ++Q +S +++LE GV+L R TR V LT A Sbjct: 1 MELRHLRAFLAVAEELHFGRAARRLQMAQPPLSQRIRQLEKELGVQLFHRNTRSVRLTGA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + +LD+L++ +R G+ G+V + + S +P+ +P + Sbjct: 61 GETFLDPVRTVLDDLDTAVRAARSAGRGEYGRVTIGFAGASSHETLPRLTRAVRAAHPGL 120 Query: 123 QFVLHDRPQQWV-MESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + V+ + V + + G +D G V P ++ I E D LA + Sbjct: 121 ELVMTGQTYANVALSRVADGSLDLGFVRLPVSRPGVEHRVIDEEELLCALPSDHPLARHE 180 Query: 182 YVPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 V L V S R + A G +VQE T+ +VAAG+G+ Sbjct: 181 AVSLADLADEPFVSFPANTGSTVRDALTEACESAGFTPRVVQEAPDSYTIMALVAAGVGV 240 Query: 240 SILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRS 277 + L ++ + S LV + +T P + RQ L R + Sbjct: 241 T-LTVTSVRHIQQSGLVYRPLTGPPIRRQAALAWRADNP 278 >UniRef50_C5BEX8 Transcriptional regulator, LysR family n=12 Tax=Enterobacteriaceae RepID=C5BEX8_EDWI9 Length = 312 Score = 263 bits (673), Expect = 7e-69, Method: Composition-based stats. Identities = 67/290 (23%), Positives = 127/290 (43%), Gaps = 2/290 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++ L+ FV V ++ SF+RA E++ ++Q +S ++ LE G LL R R + LTD+ Sbjct: 1 MDVRTLRYFVEVVRQHSFTRAAEKLFVTQPTISKMLRNLEEELGCTLLIREGRGLRLTDS 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G + R + +LD+ + +G G +++ + + I E +RYP I Sbjct: 61 GNVVYQRAQTILDQFGQLRTELDDLGALKKGSLKLGIPPMVGTQ-MAGLIGEFRQRYPGI 119 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPG-PVGDLQCEAILSEPFFLLCHRDSALAVED 181 + + + V +++ G++D + P + + S P ++L R + Sbjct: 120 ELHIAEFGGLTVEQAVLSGELDLALTALSAQPDPAIASLPLFSHPLYVLLPRQAPWLTRS 179 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + L ++L + + A + G++ I G L MV AG+GI+I Sbjct: 180 ALGMTDLAQQNILLYNEDFALYQQLMQAFSAAGVKPQIAVRSGQWDFLAAMVQAGVGIAI 239 Query: 242 LPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 LP + L+ + P + +L L+ R LS +A+A R+ Sbjct: 240 LPQPICQRLDPHSLLWLPLAPTLMWRLGLIWCHGRYLSHSAQAWIARCRE 289 >UniRef50_Q0BXT0 Putative oxidative stress regulatory protein OxyR n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BXT0_HYPNA Length = 309 Score = 262 bits (672), Expect = 8e-69, Method: Composition-based stats. Identities = 80/296 (27%), Positives = 140/296 (47%), Gaps = 4/296 (1%) Query: 1 MNY-SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVL 59 MN +L+QL+ V + + SFSRA E ++Q +S +KELE+ GV L +R +R L Sbjct: 3 MNIPTLRQLQFLVALGESGSFSRAAEACHVTQPTLSAGIKELEDLFGVALAERESRGATL 62 Query: 60 TDAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRY 119 T AG+ R LL + ++ ++ G SG + A TI+ ++PQ + + RRY Sbjct: 63 THAGEIAVARASALLADAHALVQAVTSAGALFSGPFHLGAIPTIAPFVLPQIVGQLTRRY 122 Query: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 PD++ L + +++ +R +D + P ++ + + F L L+ Sbjct: 123 PDLKLYLTEDRTHRLIDQLRARTLDAAFIALPWEAPGIEMMTLFDDEFLLAAPAGHPLSR 182 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 ++ + + LQG L+L + R + TL MVA G+G+ Sbjct: 183 KNGLSPEDLQGEDLLLLEDGHCLRDHAVSVCRLKAGAGREQVAATSLGTLVNMVAGGLGV 242 Query: 240 SILPALALP--LPEGSPLVVK-RITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 S++P LA L G + V+ +TP++ RQ+ + + A AL ++VR+Q Sbjct: 243 SLIPRLAADNGLALGPDVAVRSFVTPIIGRQVGIAWKSGSPREAEARALGELVREQ 298 >UniRef50_Q1AVR3 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVR3_RUBXD Length = 305 Score = 262 bits (672), Expect = 8e-69, Method: Composition-based stats. Identities = 78/304 (25%), Positives = 127/304 (41%), Gaps = 3/304 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ FV VA+E+SF A R+ +SQ +S +K LE GVRL DR TR V+LTD+ Sbjct: 1 MELRQLRYFVAVAEEQSFGGAARRLRISQPPLSLQIKALERELGVRLFDRNTRRVMLTDS 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ R +L+E+ + L GK+ V + + L+P I R+ + Sbjct: 61 GRAFLERARVILEEVERAKETAKGAERGLLGKLEVGFVSSATLSLLPPAIRLFRERFGGV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L + ++++ G+ G+V P + E + E + L D Sbjct: 121 ELELRELTSAQQIDALYNGETRVGLVRLPLRAPGIHLEPVFEERLVVALPSGHPLEALDR 180 Query: 183 VPWQALQGAKLVLQDYA--SGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V +A+ L+ G I R G N+ Q H T+ +VA+G+GIS Sbjct: 181 VSLEAIADLPLIFFTRQLIPGLHAQIIELFQRVGAFPNVAQHAVHLQTIVGLVASGVGIS 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 ILP+ A+ + + + L L + S E +VR+ + Sbjct: 241 ILPSSAMRVRREGIVYLPLDEDDATSWLGLAWVEGDD-SVLVENFVSIVREVAQSEAPRE 299 Query: 301 EGDP 304 Sbjct: 300 FSQA 303 >UniRef50_B2HU56 Transcriptional regulator n=17 Tax=Acinetobacter RepID=B2HU56_ACIBC Length = 295 Score = 262 bits (672), Expect = 8e-69, Method: Composition-based stats. Identities = 75/294 (25%), Positives = 139/294 (47%), Gaps = 5/294 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M +L+QL VFV VAQE + ++A + + L+QSA S ++ +LE+ G L DR + + L Sbjct: 1 MRMTLRQLAVFVAVAQEGTVTKASDAVRLTQSAASMALADLEDGLGAPLFDRLGKRLQLN 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 D G+ L + +L + + G+ S +R+ A+ TIS +L+P +A +R+P Sbjct: 61 DLGRFLLPQALEILGRCEAFEQAAK--GELQSIDLRIGATLTISDYLMPDLMANFLQRHP 118 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV- 179 L + ++E++ Q +D ++ + LQC + + C D L Sbjct: 119 QAHLQLQVGNTRQMIEAVNQFQLDLALIEGSCHLPQLQCIHWRDDELAVCCSPDHPLTRL 178 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 + Q + +L++ SG+R + D A+ ++ ANI +GH + +VA G+G+ Sbjct: 179 NRPLTPQDFHDVEWILREEGSGTREVFDNAILQDLPDANIRLTLGHNEAILKIVAGGLGM 238 Query: 240 SILPALALPLPEGSPLVVKRITP--VVERQLMLVRRKNRSLSTAAEALWDVVRD 291 S + LA+ +V TP + R L ++ + + +A + Sbjct: 239 SCISKLAIEPLSEKGQLVILDTPFWQLTRPLYMLVHRQKYQGPGLKAFLKFCDE 292 >UniRef50_A6X7A0 Transcriptional regulator, LysR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X7A0_OCHA4 Length = 308 Score = 262 bits (672), Expect = 9e-69, Method: Composition-based stats. Identities = 75/299 (25%), Positives = 140/299 (46%), Gaps = 1/299 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M +L+Q++ F V + +FSRA ER+ +Q+ +SH++++LE RL DRTTR V LT Sbjct: 1 MRPTLRQIECFQAVVELGNFSRAAERVRTTQANLSHTIRDLETVLDARLFDRTTRRVSLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 DAG+ A L E++ +G+ G+V +AA + ++P + +P Sbjct: 61 DAGRAFAEGALAGLAEIDRAAEVVRDLGKLRRGQVSIAAPPLLCTTVLPHLVRRVADEHP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ + D + V+E +R G D G+ G D++ + L + + A Sbjct: 121 NLVIKIEDVGPEIVIEQVRNGRCDLGVGTFSGEDSDVESQMALRDQLMIFVSPHHDFAGH 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + V W L ++ S R L + + + E+ ++ +V GI+ Sbjct: 181 EQVRWAELDDQPIITLTQKSNIRLLTEIGFEQAKLALRPHMEVNQIHSVLSLVEVNAGIA 240 Query: 241 ILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 +LPA A G +V + +T P + R++ L+ ++R S A A+ ++R+ ++ Sbjct: 241 VLPAYAFTALRGRGIVARPLTDPAIVREVRLITPRDREQSAATVAVRSILRNLLRQMIP 299 >UniRef50_C8WSN1 Transcriptional regulator, LysR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSN1_ALIAD Length = 290 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 76/288 (26%), Positives = 127/288 (44%), Gaps = 3/288 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L QL+ F+ VA+ +SF RA + I +SQ A+S ++++LE G L RT + V LT Sbjct: 1 MELVQLEYFLAVAEYQSFRRAADAIRVSQPALSRAIQKLEGDLGAPLFVRTAQGVRLTPC 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + L E+ + R + Q G + V ++ +P I R +P + Sbjct: 61 GEAFLPHARQALAEVAAGARKVAELAGQARGVLHVGLIYSLGTRFLPDVIRTFTRTHPGV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + P Q +++ + G++D P L IL E + D LA +D Sbjct: 121 TVRLSEAPTQKLLQQLDAGEIDIAFCT-PQHAPHLTLVEILQEELVAIVPLDHPLAAKDQ 179 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 L G V SG R +I+ A G + E T+ +VAAG+G++++ Sbjct: 180 CHLSDLAGEPFVAYARESGIRHVIERYCAEAGFTPRVAMEGVEDLTVAGLVAAGVGVAVV 239 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 P A + P+ V R+ +R + + + +LS A A V+ Sbjct: 240 PLHA--QLDQLPVHVLRLCEPCKRSVYMAWHTHTTLSPVARAFIAFVK 285 >UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellular organisms RepID=C9YBM2_9BURK Length = 309 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 73/296 (24%), Positives = 127/296 (42%), Gaps = 4/296 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M +QL+ FV VA+E F +A R+ +SQ +S +++LE GV L +RT R V LT Sbjct: 11 MRLETRQLRYFVAVAEELHFGKAAVRLHMSQPPLSQQIRQLEEGLGVTLFERTQRSVKLT 70 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AGQ + L +L + + +G +R + + +IP + +RYP Sbjct: 71 YAGQVFLAQARNALSKLEEAVDVVRAAARGEAGFLRCGYTAASAYAVIPSVMHAFKQRYP 130 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ L + IR+G +D G+V G + DL E ++ E + + LA + Sbjct: 131 LVEVALRESLSGDQYRDIREGRLDIGLVRPFGALPDLATEKLIEENLIVAIPSEHPLAQQ 190 Query: 181 DYVPWQALQGAKLVLQ-DYASG-SRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 V LQ V Y S +++ L + +VQ P + +V+AG+G Sbjct: 191 RIVDIHDLQSQPFVGFSSYGSQYFHDMVENLLGGEKVVPKLVQRATQPHAVIALVSAGLG 250 Query: 239 ISILPALALPLPEGSPLVVKRITPVVER-QLMLVRRKNRSLSTAAEALWDVVRDQG 293 ++I+P + + + + R +L L R+ +S R+ Sbjct: 251 LAIVPDASARVHMDRVVYRPLHASRLPRPELHLCWRREN-ISPLISNFKASAREVA 305 >UniRef50_A8II36 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8II36_AZOC5 Length = 305 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 94/306 (30%), Positives = 147/306 (48%), Gaps = 5/306 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M L+ F+ +A+ SF RA + LSQ+A+SH +K+LE+ GVRLL R+TR V LT Sbjct: 1 MRIDFLGLQAFIAIAERGSFLRAAAHLNLSQTALSHRMKKLEDDLGVRLLIRSTRVVTLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ L + ++ L L + + +V + TI+ +P + + +P Sbjct: 61 PDGEALLPKAKQALAGLAAEVEALREKALGQETRVALGCLPTIATSHLPHVLLDFEAAHP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + ++D + +R G FGI I + DL+ + EPF LLC + A A + Sbjct: 121 GVAVKIYDNSASEIAGLVRSGAAAFGIGIVTAAMWDLEMTPLRKEPFLLLCPQSHAFADK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V W L+G L+ +G+R LID AL N E+ H T MV AGIG++ Sbjct: 181 RAVSWGELEGVPLIRISPQAGNRALIDDALGSRREALNWRYEVQHVQTAVSMVQAGIGLT 240 Query: 241 ILPALALPLPE-GSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 I+P A+ +V P + R L++ ++ LS A L ++VR A +AG Sbjct: 241 IVPKFAMERSAIPGLRLVTLRNPSITRTLVVFTKRGVPLSPVARDLLELVR----ARIAG 296 Query: 300 REGDPL 305 R P+ Sbjct: 297 RRSAPV 302 >UniRef50_Q67MJ1 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MJ1_SYMTH Length = 273 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 5/268 (1%) Query: 29 LSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLALRLERLLDELNSTLRDTGRMG 88 ++Q ++S ++ LE GV L DR+ V LTDAG+ L E +L ++ + Sbjct: 2 VAQPSLSQQIRRLEEELGVLLFDRSRTPVRLTDAGEALLPHAEAILRQVEAAGAAVEERI 61 Query: 89 QQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLHDRPQQWVMESIRQGDVDFGIV 148 SG++ + + + L+P+ I +RYP +Q L + P Q + E + D + Sbjct: 62 GLRSGRLVLGSLPVTGSRLLPRAITAYRQRYPGVQITLREEPTQRLTELALADETDLTLT 121 Query: 149 IDPGPVGDLQCEAILSEPFFLLCHRDSALAV----EDYVPWQALQGAKLVLQDYASGSRP 204 P +L + +L+EP L D LA +P A+ G ++ G R Sbjct: 122 TLPVGSDELDWQPLLTEPILLALPPDHPLAADGPPHPAIPLSAVAGEPFLIMKPGYGFRD 181 Query: 205 LIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALALPLP-EGSPLVVKRITPV 263 L+ AA G I E TL MVAAG+G++++P +A SP+ V Sbjct: 182 LVLAACQAAGFSPQIAFESAQIETLQAMVAAGLGVTLVPQMAADRSLRPSPVFVPLAGAP 241 Query: 264 VERQLMLVRRKNRSLSTAAEALWDVVRD 291 + R L L R++R L +A+A + + Sbjct: 242 LTRTLALAWRRDRPLPRSAQAFLKLASE 269 >UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67NJ1_SYMTH Length = 311 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 69/299 (23%), Positives = 122/299 (40%), Gaps = 3/299 (1%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+ L F V +E SF+RA + + L+Q +V+ V LE++ V+L R + V LT G+ Sbjct: 13 LQHLTTFCRVVEEGSFTRAAQVLNLTQPSVTKQVGALEDYLQVQLFTRQGKRVHLTPVGE 72 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 + +++ + SG V V TI +P+ +A R +P ++ Sbjct: 73 LVYDYARQVIHLVQRCEEAVREYRSPGSGSVTVGCVHTIGLFTLPELLAAYVREHPRVKI 132 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVP 184 + + + + G+VD G+V P ++ + +P ++ A + V Sbjct: 133 NVKTGNNRETVTMLLHGEVDVGLVTTPQVHERIEVVPLFEDPLVVVAGPSFAADLPPVVS 192 Query: 185 WQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPA 244 L + + R D L GIQ V E + + MVA G GI++ P Sbjct: 193 NADLAQLPFIGYVRGARFRMTTDQVLEEMGIQPQFVMEFDNHEAIKTMVALGFGIALEPV 252 Query: 245 LALPLPEGSPLVVK---RITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 A+ S +V+ P + R L+ R+ S A A ++ + N + R Sbjct: 253 SAVQRELISGQLVRLNVPGLPRLSRTTSLILRRGERRSEAVRAFLSLLEQRYNVTIPTR 311 >UniRef50_A6GDN8 Transcriptional regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDN8_9DELT Length = 318 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 78/293 (26%), Positives = 132/293 (45%), Gaps = 7/293 (2%) Query: 1 MNY-SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVL 59 MN +L+QL+ V +A+ F + G+SQ A+S V+E+E G+ L +R V++ Sbjct: 1 MNLPTLRQLEYLVALAETGHFGETARQCGVSQPALSKQVREVEGLLGLTLFERARPRVIV 60 Query: 60 TDAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRY 119 T AG+ + R R+L + G +R+ TI+ + +P +A+ Y Sbjct: 61 TPAGEDIVARARRVLAGARELVSAADAWSGARRGTLRLGVIPTIAPYGLPGLLAKLRELY 120 Query: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 P++ + +H+ +++ +R G VD G++ P L ++ EPF L+ + LA Sbjct: 121 PEVSYAIHELQTDVLLDQLRAGAVDLGLLAHPFDAAGLAGPDLVVEPFVLVAPKGHPLAT 180 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 + + + GA L+L R A G +TL MV +G+G Sbjct: 181 RGALEPEEITGASLILMQDGHCLRDQAIEVCALAGPPPPTSVAAASVSTLVRMVESGLGA 240 Query: 240 SILPALALPLP--EGSPLVVK-RITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 ++LPA ALP+ LVV+ P R L L R + S A+ D+ Sbjct: 241 TLLPASALPVEVRNNQGLVVRGFAKPPPGRTLTLQWRAS---SPHAQWFADIA 290 >UniRef50_Q2RQL6 Transcriptional regulator, LysR family n=2 Tax=Rhodospirillaceae RepID=Q2RQL6_RHORT Length = 301 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 78/298 (26%), Positives = 135/298 (45%), Gaps = 2/298 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++L+QL+ V VA +F RA E +SQ +S + E+E G+ L +RT R VVLT Sbjct: 2 FTLRQLRYIVAVADTLNFRRAAEVCLVSQPTLSVQIAEVEAFLGLTLFERTRRSVVLTPI 61 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+++A R +L E N + + LSG +R+ T+ +L+P ++ ++P + Sbjct: 62 GREIAERARGVLREANEIVDLARSLRAPLSGPLRLGVIATLGPYLLPYVLSAFREKHPSL 121 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L + P + +R G++D +V P L + EP +L D ALA Sbjct: 122 RLYLREDPSLRLERRLRAGELDLILVDMPIDDAGLDIMDLFFEPLWLAAPPDHALADRTR 181 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V + L G L+L + R + R G + + + TL MVA+ IG+++L Sbjct: 182 VSVEDLAGRDLLLLEEGHCLRDEVLDLCRRVGAREHGGFQATSLDTLRQMVASRIGLALL 241 Query: 243 PAL--ALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 P L A + + + + R++ L RK + + + A +A Sbjct: 242 PDLYVAAEAAQDPNIRMIPFSAPPVRRVGLAWRKTSARVAEFREFGAFILARLPASLA 299 >UniRef50_UPI0001744D79 transcriptional regulator, LysR family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744D79 Length = 300 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 77/287 (26%), Positives = 135/287 (47%), Gaps = 2/287 (0%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 + L VF V ++KSFS AG+ +GL+Q +S +V++LE+ G L DR ++ LT AG+ Sbjct: 4 RALAVFAEVVRQKSFSAAGKILGLTQPTISKAVQQLEHDCGCLLFDRQGKKFRLTAAGEV 63 Query: 66 LALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFV 125 + R + +L E + + G++R+ S+ L +A R++P I+ Sbjct: 64 VYQRAQVILKEHERLRDELAGIHGLERGRLRLGLPSLGSSLLFAPHVASFRRQHPGIEIE 123 Query: 126 LHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPW 185 LH++ + E +R G+++ G+ + P P + + + EP L L E + Sbjct: 124 LHEQGSLHLQERVRAGEIEVGVSLGPVP-EEFDWQPVSDEPLVALLPAGHPLERETSLEL 182 Query: 186 QALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPAL 245 L+ VL + +I A + G GH + +VAAG+G+++LP L Sbjct: 183 ADLKDTPFVLFEPGFSLNAVILDACRQRGFSPVEAARSGHVDFIIALVAAGLGVALLPRL 242 Query: 246 ALPLPEGSPL-VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 + E VV + +L L+ R+ LS AA +VV++ Sbjct: 243 IVNSREQRVCTVVPLRDEDLRWRLGLIWRRGGDLSPAARRWLEVVQE 289 >UniRef50_Q7W9G9 Probable LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W9G9_BORPA Length = 296 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 135/298 (45%), Gaps = 7/298 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ FV VA++ F+RA R+G+ Q +S +++LE G LL R R V LT+A Sbjct: 1 MELRHLRYFVAVAEDLHFTRAAARLGIGQPPLSLQIQQLEREIGTPLLLRQPRGVALTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAH-LIPQCIAESHRRYPD 121 G + +L + R+G G + V + + H +P I RYP Sbjct: 61 GARFLQDARAVLHAAELAVETARRLGHGEQGDIAVGFTASAVFHPYLPSAIRAYRDRYPG 120 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGD-LQCEAILSEPFFLLCHRDSALAVE 180 ++ L + + ++ +R G+VD V P + D E +L EP + D L + Sbjct: 121 VRIALSESNARALLAGLRSGEVDVAFVRPPYALDDEFASERVLDEPMLVALPPDHPLCRK 180 Query: 181 DYVPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 VP AL VL +G I A R G ++QE A++ +VAAG+G Sbjct: 181 RTVPVAALAEQDFVLYPRPIGAGLYDAIMQACQRAGFTPRVIQEAPQMASIISLVAAGVG 240 Query: 239 ISILPALALPLPEGSPLVVKRITPVVERQLM-LVRRKNRSLSTAAEALWDVVRDQGNA 295 I+++PA A+ + +V + I R L+ + R+ S A +++R + + Sbjct: 241 IAVVPA-AMRHMGAAGIVYRPIRGDAPRALLDMAYRRQ-PRSAAVRHAVELLRGRAHP 296 >UniRef50_A0K8T5 Transcriptional regulator, LysR family n=55 Tax=Proteobacteria RepID=A0K8T5_BURCH Length = 308 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 77/299 (25%), Positives = 132/299 (44%), Gaps = 5/299 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ FV VA+E F RA +R+ +SQ A+S +++ E+ GV+L RT + V LT+A Sbjct: 9 VELRQLRYFVAVAEELHFGRAAKRLFISQPALSFDIRKFEDALGVQLFSRTNKTVALTNA 68 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L RLL + + R T R L+G++R+ ++ +P + YP + Sbjct: 69 GEVLLGEARRLLLQADEAERLTVRSASGLAGRLRIGFVHSMLYRGLPDAVRRFEADYPGV 128 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + VL + +++I++G +D G +++ A+ +EPF LA Sbjct: 129 EVVLSEMNTHAQVQAIQRGQIDLGYAHWGHFPPEVESVAVYAEPFVCCLPAAHPLARRRQ 188 Query: 183 VPWQALQGAKLVLQDYASG--SRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V L +L + LI A G I E T+ M+ G+GI+ Sbjct: 189 VALATLATEPFILFPRDAAPHYHDLIIAQCVNAGFSPLIRHEARLWQTILSMIEFGMGIA 248 Query: 241 ILPALALPLPEGSPLVVKRITPVVE-RQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 ++P + + +E R L L +++ + A VR +AL A Sbjct: 249 LVPRVLQQAKSDRLAFLPLKDASLESRTLAL--KRSGTAEPVALRFAGYVRASIDALPA 305 >UniRef50_B9TDR3 HTH-type transcriptional regulator xapR, putative n=1 Tax=Ricinus communis RepID=B9TDR3_RICCO Length = 301 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 80/297 (26%), Positives = 133/297 (44%), Gaps = 10/297 (3%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ LKQLK F+ VA+EKSFSRA ER+ +SQ +S + +LE+ GV+L RTTR LT Sbjct: 1 MSIDLKQLKYFLAVAEEKSFSRAAERLHISQPPLSQQIMKLESELGVKLFARTTRTFELT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG+ L LL + T+ ++ + G++RV + IP + E ++P Sbjct: 61 VAGKALMSEAADLLARMRMTIDTIRQIDRGEVGRLRVGIVGSAMWGPIPSLLEEFQTKFP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGD------LQCEAILSEPFFLLCHRD 174 + + LH+ E++R VD G +P D L+ E E + + Sbjct: 121 RVTWTLHEMGPTLQYEALRAKQVDVGFWREPRIDDDVLKNDNLRQELCFREDVCVAINEH 180 Query: 175 SALAVEDYVPWQALQGAKL--VLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPM 232 LA ++ + + + + D +S R L+ + G Q I QE P TL M Sbjct: 181 HPLAKQEAIELMDIAEEPMLTLALDKSSFPRYLM-QCCVQAGFQPTIAQEATEPQTLLAM 239 Query: 233 VAAGIGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 V AG+G++++P + + V + L + + A +++ Sbjct: 240 VGAGLGVALMPETTSRIGWPGVVFVPIRSNPPSANLYITYTTQDD-APVVRAFLNIL 295 >UniRef50_Q12AP3 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=Q12AP3_POLSJ Length = 303 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 74/302 (24%), Positives = 137/302 (45%), Gaps = 3/302 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ FV +A+ +F+RA ER+ ++QS +SH +++LE G L +R + V++T+ Sbjct: 1 MELRHLRYFVALAECLNFTRAAERVHITQSTLSHQIRQLEEEIGELLFERVGKRVLITER 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + L E++ + + L+GK+R+ ++ T + IP+CIA R+P + Sbjct: 61 GELFLSYAAKALKEVDQGVAALKESARGLTGKLRIGSTHTFNQGFIPECIATLLVRHPTV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + E + G +D GI P VGDL E + +E L+ LA Sbjct: 121 KVAASEFTADDIGERLASGALDLGISYRPRTVGDLWFEPLYNEQMVLVVSPQHPLAGRKR 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAA-GIGISI 241 + L LVL A +R ++D + +V E+ A + +V IG +I Sbjct: 181 IRLVELHRQPLVLLPEAFATRAMLDECFRACDAEPLVVVEMNTLAPMLALVERTQIG-AI 239 Query: 242 LPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGRE 301 + A+ + V +P R ++ +++ + A +VR + R Sbjct: 240 VSENAV-RDRSTLRAVPLESPTPMRTPGILWKRDVDKTAPMRAFASIVRAIALSSRLRRP 298 Query: 302 GD 303 D Sbjct: 299 SD 300 >UniRef50_A4JMP2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JMP2_BURVG Length = 299 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 80/291 (27%), Positives = 129/291 (44%), Gaps = 4/291 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVV--LT 60 LK + F + ++ +F +A +R+ LSQ A+S +++ LE+ GV LL+R R V LT Sbjct: 1 MDLKAFRYFDEIVRQGNFGKAAKRLPLSQPALSKAIRLLEDELGVTLLERGRRGVAVKLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG+ + +L E D + G++R+ SA L +AE RYP Sbjct: 61 SAGEVVLQHARSILAERERMQFDLDALRDLDRGELRLGLPPVGSAELFAAPLAEFRERYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + LH+ + +++R G+++ + P DLQ I EP L R AL Sbjct: 121 GVSIHLHEHGSAELEQAVRDGELELAATMLPVRT-DLQAMFIRREPMVLAVPRGHALETH 179 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V L G + + + A G N V P +VAAG+G++ Sbjct: 180 VRVHLHELNGVPFIALNEGFALTRRLREACIAQGFTINEVAHSAQPNFALALVAAGLGVT 239 Query: 241 ILPAL-ALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 LP L A ++ P +E ++ +V RK +LS AA A D+++ Sbjct: 240 CLPRLVARRHGNAGVRLIDLDAPGLEWRVAIVWRKGTTLSWAARAWLDLIK 290 >UniRef50_C7RPQ0 Transcriptional regulator, LysR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RPQ0_9PROT Length = 303 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 80/298 (26%), Positives = 140/298 (46%), Gaps = 3/298 (1%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N +++QL++F A SF+RA E++ L+ +A+S +K+LE+ +G L +R + V LT+ Sbjct: 3 NATIRQLQIFSVAASHLSFARAAEKLHLTHAAISLQIKQLEDVSGALLFERIGKRVFLTE 62 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 AG+ L ++L L + G++ VA + T + + P +AE + D Sbjct: 63 AGEILLDHTRQILQSLKEADEALLALKGLRGGRIAVAVAST-AEYFAPGLLAEFRKVQAD 121 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 ++ L + V + +VD I+ P D A P ++ LA + Sbjct: 122 VRIRLLIDNRDTVTRLLVGNEVDLAIMGRPPAELDATAVAFAPHPLVIVASAAHPLAGQA 181 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V + L G L++++ SG+R ++ I+ I E+G + V AG+GIS Sbjct: 182 NVAVEDLAGETLIVRETGSGTRSAMEEFFQERSIKPRIGMEMGSNEAIKQAVVAGLGISF 241 Query: 242 LPA--LALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALM 297 + L L L +++K V R+ +VR KN+ L+ A A WD V + A + Sbjct: 242 ISQHTLGLELSAARLVILKVEGTPVIRRWHIVRHKNKHLTPALGAFWDFVLEFAPAYL 299 >UniRef50_Q1AYT0 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AYT0_RUBXD Length = 293 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 67/292 (22%), Positives = 122/292 (41%), Gaps = 7/292 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L ++ FV A+E F RA R+ ++Q ++S V LE GVRL RT REV LT+A Sbjct: 1 MELSHIRYFVAAAEELHFGRAARRLHVTQPSLSKRVAGLERELGVRLFHRTRREVRLTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ R+L++ + + G+ G++ + ++P+ + E H R+P++ Sbjct: 61 GEIFLEGARRVLEDALRAAEEARKAGRGELGRLEIGFFSPAIYGVLPEILKEYHERFPEV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + LH+ +E +R+G ++ G + P E + EP A + Sbjct: 121 RVTLHEWTSSVQLERMREGKIEIGFMRAPVEEAGFVTEHVFVEPVVAALPEGHPQARREV 180 Query: 183 VPWQALQGAKLVLQ----DYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 V + L ++ + S R + + R G I QE+ + +VA G+G Sbjct: 181 VSPRELADEPFIMVPRSKEPNSFDRYV--SICQRAGFSPKITQEVFEIHAIVGLVATGMG 238 Query: 239 ISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 ++ + L + P +VRR +R S + ++ Sbjct: 239 VAFVQGSVANLKRPGVVYRPLDDPEARIGTAIVRRSSRP-SPVLRTFLETLQ 289 >UniRef50_Q167Q4 Oxidative stress transcription regulator, oxyR, putative n=28 Tax=Alphaproteobacteria RepID=Q167Q4_ROSDO Length = 313 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 80/305 (26%), Positives = 136/305 (44%), Gaps = 7/305 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +LKQL+ F +A+ K F RA + ++Q A+S +KELE G L++R TRE+ LT Sbjct: 4 LTLKQLRYFDALARHKHFGRAADSCAITQPALSLQIKELEALVGAPLVERATREIRLTSL 63 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G R ++L ++ L+G++R+ T + +L+P + +R+ D+ Sbjct: 64 GSDFITRTRKILLSIDELDELARAAQGPLAGRLRLGVIPTAAPYLLPSIMTSFAQRFADL 123 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + Q +++ + + +D IV P L+ A+ E F L+ A + Sbjct: 124 DVELRESVTQALIQDLLEARLDLAIVALPISEPALREFALFEEDFVLVRPPQD--AGKPV 181 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + LQ +L+L + R + + E +TL MV AGIG++++ Sbjct: 182 PSPEMLQEMRLLLLEEGHCFRDQALSFCKSVEAHPRQMMEGSSLSTLVQMVGAGIGVTLI 241 Query: 243 PALALPLP--EGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 P +AL L V + P R + +V RK LS + +VR G R Sbjct: 242 PEMALSLETRSADVAVARFPKPGPSRTIGMVWRKTNPLSDQLMQIGAIVRGVGQ---KAR 298 Query: 301 EGDPL 305 + PL Sbjct: 299 DTHPL 303 >UniRef50_A8FJ94 Possible LysR family transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FJ94_BACP2 Length = 290 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 78/286 (27%), Positives = 146/286 (51%), Gaps = 5/286 (1%) Query: 7 QLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQL 66 Q KVF+TV + SF++AGE++GL+QS VSH++ +LE+ GV LL R + LTDAG+++ Sbjct: 8 QYKVFLTVVECGSFTKAGEKLGLTQSGVSHNIAKLESELGVVLLRRNRNGLALTDAGERV 67 Query: 67 ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVL 126 + +++ + ++ + G +++ + S+ ++PQ I ++YP+IQ L Sbjct: 68 MPHIRQIIHHASLLEQEAALIQGMEVGSIKIGTFSSFSSKMLPQLIHLFTKKYPNIQVEL 127 Query: 127 HDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQ 186 ++ + + E I G +D G + P + + + + +L D + + Sbjct: 128 YEGGYEEIEEWIASGTIDVGFLTQP--SREFETIPLFQDELVVLMQEDHRFNTKKVIEVD 185 Query: 187 ALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALA 246 +L ++ LI L G++ +++ EIG TL MV G+G++I+P L Sbjct: 186 SLHDESFIMPKAGCDL--LIKKLLKERGVKPHVLFEIGDNNTLISMVQEGLGVTIIPTLI 243 Query: 247 LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 LP P+ S V + V R++ L + + S +A+ +VV+D Sbjct: 244 LP-PQMSHTKVIPLETSVYREINLAFKSFKVASPSAKRWIEVVKDH 288 >UniRef50_Q3SGH4 Oxidative stress transcriptional regulator n=2 Tax=Proteobacteria RepID=Q3SGH4_THIDA Length = 301 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 73/294 (24%), Positives = 136/294 (46%), Gaps = 9/294 (3%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L++L+ V +A F RA E ++QS +S +K+LE+ GV L DR+ + V T Sbjct: 1 MTLQELRYLVALADHGHFGRAAEACFITQSTLSTQIKKLEDFLGVTLFDRSLKRVTPTPI 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+++ ++DE ++ V + T+ + +P + HR++P + Sbjct: 61 GREILQAARTIVDEAERIRTLAKHAQDPMTRTVHLGVIPTLGPYYLPHALTLVHRKHPGL 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + +L + ++E + G +D G++ P L+ E + EPF+ D ALA + Sbjct: 121 RLLLREEMTPQILEHLADGKLDAGLLALPVTDEGLRVEPLFHEPFYAALPADHALAAREA 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEI--GHPATLFPMVAAGIGIS 240 + + KL+L D R + AL G +++ +E+ TL MV G+G++ Sbjct: 181 LSVADIMAEKLLLLDEGHCLR---EQALDVCGARSSGREEVRATSLETLRQMVGMGLGLT 237 Query: 241 ILPALAL---PLPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 +LPALA+ P + ++ +P R + LV R+ E L ++ Sbjct: 238 LLPALAVDAAPRQTRKLVEIRPFRSPPPGRTIGLVWRRRAPFPETFERLAATLK 291 >UniRef50_Q1GX89 Transcriptional regulator, LysR family n=13 Tax=Proteobacteria RepID=Q1GX89_METFK Length = 330 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 76/294 (25%), Positives = 136/294 (46%), Gaps = 9/294 (3%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N +L +LK V VA+E++F RA E+ +SQ A+S +VK+LE GV + +R+ R+V T Sbjct: 28 NMTLSELKFIVAVAKERNFRRAAEKCFVSQPALSLAVKKLEEELGVTIFERSHRDVATTP 87 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 G+Q+ + R L+E + QL+G ++ + +L+P+ I R P+ Sbjct: 88 IGEQIIAQAIRTLEESDRIKEIARMGNNQLAGPFKLGVIYSTGPYLLPEIIPALRRLAPE 147 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + + + + +R +D I+ P V ++CE + E F + A Sbjct: 148 MPLEVEENLTANLETQLRNRVIDAAIIALPFDVPGVRCEPLYDESFVVAVPDIHPWAERK 207 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAAL---ARNGIQANIVQEIGHPATLFPMVAAGIG 238 + + L K++L + + A +R+G V + T+ MVA+ +G Sbjct: 208 EIRAEELADEKVLLLNSGHCFSNQVVLACPELSRHG----EVLQGNSLETIRNMVASNLG 263 Query: 239 ISILPALALPLPEGSPLV--VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 I++LP A +PL+ + PV R++ L RK + A + L +R Sbjct: 264 ITVLPCSAAAGRYQNPLIRTIPFADPVPTRRIALAWRKGYTREKAIDCLLQAIR 317 >UniRef50_C8WV81 Transcriptional regulator, LysR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WV81_ALIAD Length = 305 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 4/292 (1%) Query: 7 QLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQL 66 QL+VFVTV +E SF+RA E++ +SQ A+S V+ LE GVRL+DR R + + AG+ + Sbjct: 7 QLRVFVTVVEENSFTRAAEKLHISQPAISQHVQTLEQRLGVRLIDRGRRRLQVNPAGRIV 66 Query: 67 ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVL 126 + +L R M + +G V V AS T +++P IA + YP +Q + Sbjct: 67 YEHAKEILALYRRMERLIADMQEMPAGPVHVGASLTYGEYVLPHVIARFRKAYPAVQPSV 126 Query: 127 HDRPQQWVMESIRQGDVDFGIVIDPGPVGD-LQCEAILSEPFFLLCHRDSALAVEDYVPW 185 Q + ++ +D GIV V D + + ++ S E Sbjct: 127 SIANTQTIAHAVAVRQLDIGIVEGQDVVEDEVVLTPFAEDEMLVVASPASPWYAEAP-DR 185 Query: 186 QALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPAL 245 L+ A +++ SG+R + D + GIQ + E + VAAG+G++ L Sbjct: 186 SLLERATWFIREPGSGTREMTDRLFTQLGIQPRDLVEYTSSQVIKESVAAGLGLACLSRW 245 Query: 246 --ALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 A L G + V+R +V K+ + A++ L+ + + G+ Sbjct: 246 VVARELAWGMLRTLPIPCAPVKRTFSIVTPKSAFETKASKLLYSFLMEHGSP 297 >UniRef50_P42722 HTH-type transcriptional regulator cfxR n=9 Tax=Betaproteobacteria RepID=CFXR_RALEH Length = 317 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 73/302 (24%), Positives = 134/302 (44%), Gaps = 3/302 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L+QL++FVTVA+ SF RA E + L+Q AVS VK+LE+ G+ L +R ++ LT+ Sbjct: 8 LTLRQLQIFVTVARHASFVRAAEELHLTQPAVSMQVKQLESVVGMALFERVKGQLTLTEP 67 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G +L R+L E+ + G + + T S + P+ +A +P + Sbjct: 68 GDRLLHHASRILGEVKDAEEGLQAVKDVEQGSITIGLIST-SKYFAPKLLAGFTALHPGV 126 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + ++ ++ ++ +D ++ P D E I + P L+ L Sbjct: 127 DLRIAEGNRETLLRLLQDNAIDLALMGRPPRELDAVSEPIAAHPHVLVASPRHPLHDAKG 186 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 Q L+ +L++ SG+R + + + V +G T+ V AG+GIS+L Sbjct: 187 FDLQELRHETFLLREPGSGTRTVAEYMFRDHLFTPAKVITLGSNETIKQAVMAGMGISLL 246 Query: 243 P--ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 L L L G ++ +ER + ++ LS A+E+ + + + Sbjct: 247 SLHTLGLELRTGEIGLLDVAGTPIERIWHVAHMSSKRLSPASESCRAYLLEHTAEFLGRE 306 Query: 301 EG 302 G Sbjct: 307 YG 308 >UniRef50_C6NW00 Transcriptional regulator, LysR family n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NW00_9GAMM Length = 332 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 70/290 (24%), Positives = 135/290 (46%), Gaps = 5/290 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + +QL+VF+ V+ +SF++A + + L+Q VS +K+L G+ L ++ +E+ LTDA Sbjct: 21 ITFRQLQVFLAVSHHRSFTKAADALFLAQPTVSLQMKKLGEIVGLPLFEQIGKEIRLTDA 80 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ L + + + G++R+ T + ++ P+ +A +++P I Sbjct: 81 GQDLYTACREIFAIVENLETQIADRKGIRRGRLRLGVVTT-AKYIAPELLAAFGQQFPGI 139 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVID-PGPVGDLQCEAILSEPFFLLCHRDSALAV-E 180 QF + + ++ I+ + D ++ P ++ P ++ R L Sbjct: 140 QFSMTVSNRDEIIRRIQDSEDDLYVMGQVPTDEVAVEATPFAWNPLTVMVPRGHPLTRLG 199 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 VP A+ A ++++ SG+R A ++ NI E+ + +A+G+GIS Sbjct: 200 RPVPLAAIAEAPFLIREPGSGTRHAYLRLFAEKDLRPNITMELSSNEAIKHAIASGLGIS 259 Query: 241 ILP--ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDV 288 IL +LAL EG V+ + R+ LV ++R LS A+ + Sbjct: 260 ILSIHSLALEGTEGPVEVLDAEGFPILRKWYLVYPRDRVLSLTAQKFMEF 309 >UniRef50_Q3A466 Transcriptional regulator, LysR family n=6 Tax=Desulfuromonadales RepID=Q3A466_PELCD Length = 308 Score = 260 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 79/290 (27%), Positives = 145/290 (50%), Gaps = 1/290 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ +L++L VF VA+ +++GE + +SQ A+S ++KELE + G +L R R ++L Sbjct: 1 MSITLRKLAVFTKVAETGQATKSGELLLMSQPAISMALKELEENAGGQLFIRQGRRLILN 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 D G+ L + +L + +Q G +R+ AS TI +L+P IA Y Sbjct: 61 DRGRLLLEPAQEILRRVARFENLLAESERQPRGLLRIGASTTIGNYLLPSLIARYSCLYT 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 D + L + S+ +GD+D G++ P L+ ++ ++ R+ + Sbjct: 121 DAKASLQVGNTHQIEVSLDRGDIDLGLIEGPSHAPLLKAIPWRNDELVVIAGREHPITKI 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + V L+ A ++++ SG+R + +AALA G NI E+GH + V AG+GIS Sbjct: 181 NSVTADMLEKANWIMREPGSGTREVFEAALAEFGGSINIDLELGHTEAIKKAVEAGLGIS 240 Query: 241 ILPALALPLPEGSPLVVKRITPV-VERQLMLVRRKNRSLSTAAEALWDVV 289 L LA+ + +V+ T + + R L ++ R + + ++ D++ Sbjct: 241 CLSRLAVQRELENGWLVEISTHLNLTRSLTILLRDDGYRTKLLQSFLDML 290 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=... 341 3e-92 UniRef50_P39592 Uncharacterized HTH-type transcriptional regulat... 336 5e-91 UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepI... 336 7e-91 UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=C... 334 3e-90 UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=... 334 3e-90 UniRef50_P0ACR7 Uncharacterized HTH-type transcriptional regulat... 333 4e-90 UniRef50_UPI0001745DD5 transcriptional regulator, LysR family pr... 330 4e-89 UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Ba... 324 3e-87 UniRef50_Q3AG03 Transcriptional regulator, LysR family n=2 Tax=C... 323 6e-87 UniRef50_C0ZCK2 Transcriptional regulator n=1 Tax=Brevibacillus ... 322 7e-87 UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=P... 322 8e-87 UniRef50_C6CYG5 Transcriptional regulator, LysR family n=2 Tax=P... 321 3e-86 UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=G... 319 7e-86 UniRef50_A0L4T1 Transcriptional regulator, LysR family n=2 Tax=P... 318 2e-85 UniRef50_UPI00016C47B2 transcriptional regulator, LysR family pr... 317 2e-85 UniRef50_A4J1K6 Transcriptional regulator, LysR family n=1 Tax=D... 317 3e-85 UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax... 317 3e-85 UniRef50_C6P9X7 Transcriptional regulator, LysR family n=1 Tax=T... 316 6e-85 UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=... 316 9e-85 UniRef50_Q65GU9 Transcriptional regulator YbbE n=2 Tax=Bacillus ... 315 1e-84 UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Prote... 315 1e-84 UniRef50_Q1IRZ3 Transcriptional regulator, LysR family n=1 Tax=C... 315 1e-84 UniRef50_B1KU62 Transcriptional regulator, LysR family n=10 Tax=... 315 2e-84 UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=ma... 313 4e-84 UniRef50_P20668 HTH-type transcriptional regulator gltC n=17 Tax... 313 4e-84 UniRef50_Q31FC6 Transcriptional regulator, LysR family n=7 Tax=P... 313 5e-84 UniRef50_B7IPY3 Transcriptional regulator, LysR family n=74 Tax=... 313 6e-84 UniRef50_Q9F1R2 HTH-type transcriptional activator cmpR n=38 Tax... 313 6e-84 UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=M... 312 7e-84 UniRef50_C8WUA0 Transcriptional regulator, LysR family n=1 Tax=A... 312 7e-84 UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=B... 312 1e-83 UniRef50_A7ZAT2 Putative HTH-type transcriptional regulator n=2 ... 312 1e-83 UniRef50_P25544 RuBisCO operon transcriptional regulator n=13 Ta... 312 1e-83 UniRef50_P37499 Uncharacterized HTH-type transcriptional regulat... 311 2e-83 UniRef50_C9RY94 Transcriptional regulator, LysR family n=8 Tax=B... 311 3e-83 UniRef50_Q475G5 Regulatory protein, LysR:LysR, substrate-binding... 310 3e-83 UniRef50_Q04778 HTH-type transcriptional regulator alsR n=87 Tax... 310 4e-83 UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepI... 310 5e-83 UniRef50_A4F7Y9 Transcriptional regulator, LysR family n=3 Tax=A... 309 9e-83 UniRef50_B4WMZ4 Putative uncharacterized protein n=1 Tax=Synecho... 308 1e-82 UniRef50_C5BDD2 HTH-type transcriptional regulator AlsR n=2 Tax=... 308 1e-82 UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdema... 308 1e-82 UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Ba... 308 1e-82 UniRef50_P77559 Uncharacterized HTH-type transcriptional regulat... 307 3e-82 UniRef50_B8K739 Transcriptional regulator, substrate-binding of ... 307 3e-82 UniRef50_C1M4D9 Putative uncharacterized protein n=2 Tax=Citroba... 307 4e-82 UniRef50_P0ACQ6 Hydrogen peroxide-inducible genes activator n=27... 307 4e-82 UniRef50_A4G228 Transcriptional regulatory protein, LysR family ... 306 6e-82 UniRef50_A5D2L1 Transcriptional regulator n=1 Tax=Pelotomaculum ... 306 6e-82 UniRef50_B8FPA0 Transcriptional regulator, LysR family n=4 Tax=C... 306 6e-82 UniRef50_B5YJV7 Transcriptional regulator n=1 Tax=Thermodesulfov... 306 6e-82 UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=R... 306 6e-82 UniRef50_Q1IHL3 Transcriptional regulator, LysR family n=1 Tax=C... 306 8e-82 UniRef50_C0ZI27 Transcriptional regulator n=1 Tax=Brevibacillus ... 306 9e-82 UniRef50_B0N992 Putative uncharacterized protein n=2 Tax=Clostri... 305 1e-81 UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=T... 305 1e-81 UniRef50_A3I8L6 Transcriptional regulator, LysR family protein n... 305 1e-81 UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=g... 305 1e-81 UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=... 305 1e-81 UniRef50_P52696 Uncharacterized HTH-type transcriptional regulat... 305 2e-81 UniRef50_B5JN19 Putative uncharacterized protein n=1 Tax=Verruco... 304 2e-81 UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae R... 304 2e-81 UniRef50_Q1AVR3 Transcriptional regulator, LysR family n=1 Tax=R... 304 2e-81 UniRef50_Q3M2K4 Transcriptional regulator, LysR family n=5 Tax=C... 304 2e-81 UniRef50_A6VV39 Transcriptional regulator, LysR family n=6 Tax=G... 304 3e-81 UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=R... 304 4e-81 UniRef50_B8D275 Transcriptional regulator, LysR family n=11 Tax=... 304 4e-81 UniRef50_A5MZU7 Predicted transcriptional regulator n=3 Tax=Clos... 303 6e-81 UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=D... 303 6e-81 UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=A... 302 7e-81 UniRef50_A4WZV0 Transcriptional regulator, LysR family n=1 Tax=R... 302 8e-81 UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Ta... 302 1e-80 UniRef50_B9ZSB8 Transcriptional regulator, LysR family n=4 Tax=B... 302 1e-80 UniRef50_B1Y5W5 Transcriptional regulator, LysR family n=2 Tax=B... 301 2e-80 UniRef50_Q46WQ0 Transcriptional regulator, LysR family n=1 Tax=R... 301 2e-80 UniRef50_Q3MEY8 Transcriptional regulator, LysR family n=1 Tax=A... 301 2e-80 UniRef50_B9MIR3 Transcriptional regulator, LysR family n=4 Tax=B... 301 2e-80 UniRef50_A9F7Y4 Transcriptional regulator, LysR family n=1 Tax=S... 301 3e-80 UniRef50_B5WR38 Transcriptional regulator, LysR family n=2 Tax=B... 301 3e-80 UniRef50_C6D0V7 Transcriptional regulator, LysR family n=4 Tax=B... 301 3e-80 UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=C... 300 3e-80 UniRef50_C8VWS6 Transcriptional regulator, LysR family n=1 Tax=D... 300 4e-80 UniRef50_Q1AYT0 Transcriptional regulator, LysR family n=1 Tax=R... 300 4e-80 UniRef50_D1BNW2 Transcriptional regulator, LysR family n=4 Tax=V... 300 4e-80 UniRef50_Q0KE24 Transcriptional regulator, LysR-family n=2 Tax=C... 299 7e-80 UniRef50_A4J4H0 Transcriptional regulator n=1 Tax=Desulfotomacul... 299 7e-80 UniRef50_Q5X4A2 Hydrogen peroxide-inducible genes activator n=4 ... 299 7e-80 UniRef50_A7ZAS3 YybE n=1 Tax=Bacillus amyloliquefaciens FZB42 Re... 299 9e-80 UniRef50_C9KJX6 Transcriptional regulator, LysR family n=2 Tax=V... 299 9e-80 UniRef50_A9B3V4 Transcriptional regulator, LysR family n=1 Tax=H... 299 9e-80 UniRef50_B1ZUQ0 Transcriptional regulator, LysR family n=1 Tax=O... 299 1e-79 UniRef50_Q5WCI6 LysR family transcriptional activator of glutama... 299 1e-79 UniRef50_D2P368 Transcription activator of glutamate synthase op... 299 1e-79 UniRef50_A0RKW5 Transcriptional regulator, LysR family n=81 Tax=... 298 1e-79 UniRef50_A4XTW7 Transcriptional regulator, LysR family n=1 Tax=P... 298 1e-79 UniRef50_Q0F2Z7 Transcriptional regulatory protein, LysR family ... 298 1e-79 UniRef50_Q7WCW0 Probable LysR-family transcriptional regulator n... 298 1e-79 UniRef50_B6FPK4 Putative uncharacterized protein n=1 Tax=Clostri... 298 1e-79 UniRef50_D0KYG7 Transcriptional regulator, LysR family n=3 Tax=G... 298 2e-79 UniRef50_Q0K6D4 Transcriptional regulator, LysR-family n=2 Tax=C... 298 2e-79 UniRef50_B1I114 Transcriptional regulator, LysR family n=1 Tax=C... 298 2e-79 UniRef50_Q7NKC0 Nitrogen assimilation transcriptional activator ... 298 2e-79 UniRef50_B7JB31 Rubisco operon transcriptional regulator n=5 Tax... 298 2e-79 UniRef50_C7I2X4 Transcriptional regulator, LysR family n=1 Tax=T... 297 2e-79 UniRef50_B5JV63 LysR protein n=1 Tax=gamma proteobacterium HTCC5... 297 3e-79 UniRef50_UPI000178812A transcriptional regulator, LysR family n=... 297 3e-79 UniRef50_A1SY80 Transcriptional regulator, LysR family n=1 Tax=P... 297 3e-79 UniRef50_C6D0W9 Transcriptional regulator, LysR family n=1 Tax=P... 297 3e-79 UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=... 297 4e-79 UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=A... 297 5e-79 UniRef50_C9KJ25 Transcriptional regulator GltC n=1 Tax=Mitsuokel... 296 5e-79 UniRef50_B1Z4Z1 Transcriptional regulator, LysR family n=5 Tax=P... 296 6e-79 UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Ac... 296 6e-79 UniRef50_Q7W9G9 Probable LysR-family transcriptional regulator n... 296 6e-79 UniRef50_D1WWA8 Transcriptional regulator, LysR family n=7 Tax=S... 296 6e-79 UniRef50_B5JQV8 LysR substrate binding domain protein n=1 Tax=Ve... 296 7e-79 UniRef50_A8RPQ8 Putative uncharacterized protein n=2 Tax=Clostri... 296 7e-79 UniRef50_Q1LN85 Transcriptional regulator, LysR family n=1 Tax=C... 296 8e-79 UniRef50_Q0AZ61 Transcriptional regulator, LysR family n=1 Tax=S... 296 8e-79 UniRef50_Q1ATU8 Transcriptional regulator, LysR family n=1 Tax=R... 295 9e-79 UniRef50_A0JW92 Transcriptional regulator, LysR family n=3 Tax=M... 295 9e-79 UniRef50_A6UMN5 Transcriptional regulator, LysR family n=1 Tax=S... 295 9e-79 UniRef50_D1VD43 Transcriptional regulator, LysR family n=1 Tax=F... 295 1e-78 UniRef50_C7RSN5 Transcriptional regulator, LysR family n=1 Tax=C... 295 1e-78 UniRef50_Q7WNC1 LysR-family transcriptional regulator n=1 Tax=Bo... 295 1e-78 UniRef50_B8IJK2 Transcriptional regulator, LysR family n=1 Tax=M... 295 1e-78 UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellula... 295 1e-78 UniRef50_Q46PT5 Transcriptional regulator, LysR family n=1 Tax=R... 295 1e-78 UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillace... 295 1e-78 UniRef50_C4V4C8 Transcriptional regulator n=2 Tax=Selenomonas Re... 295 1e-78 UniRef50_A0K8T5 Transcriptional regulator, LysR family n=55 Tax=... 295 2e-78 UniRef50_C9RA29 Transcriptional regulator, LysR family n=1 Tax=A... 295 2e-78 UniRef50_Q0EX23 Transcriptional Regulator, LysR family protein n... 295 2e-78 UniRef50_C3LMU4 Transcriptional regulator, LysR family n=65 Tax=... 294 2e-78 UniRef50_Q2J7C4 Transcriptional regulator, LysR family n=22 Tax=... 294 2e-78 UniRef50_A3ZYQ6 Transcriptional regulator, LysR family protein n... 294 2e-78 UniRef50_C9PFK4 Transcriptional regulator substrate-binding of L... 294 2e-78 UniRef50_Q7W708 Putative LysR-family transcriptional regulator n... 294 3e-78 UniRef50_A0R3Z8 Transcriptional regulator, LysR family protein n... 294 3e-78 UniRef50_Q06610 RuBisCO operon transcriptional regulator n=4 Tax... 294 3e-78 UniRef50_C0CUF5 Putative uncharacterized protein n=1 Tax=Clostri... 294 4e-78 UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=C... 293 4e-78 UniRef50_B9XBB1 Transcriptional regulator, LysR family n=2 Tax=V... 293 4e-78 UniRef50_Q3SFM8 Transcriptional regulator n=3 Tax=Proteobacteria... 293 5e-78 UniRef50_Q4KHB2 Transcriptional regulator, LysR family n=28 Tax=... 293 5e-78 UniRef50_C1BAS4 Putative LysR family transcriptional regulator n... 293 5e-78 UniRef50_C2BX95 Transcriptional regulator n=1 Tax=Listeria grayi... 293 6e-78 UniRef50_C1ZI46 Transcriptional regulator, COG0583 n=1 Tax=Planc... 293 6e-78 UniRef50_C6DBU7 Transcriptional regulator, LysR family n=4 Tax=P... 293 7e-78 UniRef50_C6J497 Transcriptional regulator n=1 Tax=Paenibacillus ... 292 8e-78 UniRef50_C7I0K1 Transcriptional regulator, LysR family n=1 Tax=T... 292 8e-78 UniRef50_Q1IX51 Transcriptional regulator, LysR family n=3 Tax=D... 292 1e-77 UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Sy... 292 1e-77 UniRef50_C6D9U9 Transcriptional regulator, LysR family n=1 Tax=P... 292 1e-77 UniRef50_UPI0001694914 Transcriptional Regulator, LysR family pr... 292 1e-77 UniRef50_A8FAC2 Possible LysR family transcriptional regulator n... 292 1e-77 UniRef50_C0Z4V5 Transcriptional regulator n=1 Tax=Brevibacillus ... 292 1e-77 UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=M... 292 1e-77 UniRef50_A1VNR0 Transcriptional regulator, LysR family n=2 Tax=C... 292 1e-77 UniRef50_B5ELK2 Transcriptional regulator, LysR family n=2 Tax=A... 292 1e-77 UniRef50_C4ZHT7 Transcription activator of glutamate synthase(Ly... 292 1e-77 UniRef50_A6SUU1 OxyR hydrogen peroxide-inducible genes activator... 292 1e-77 UniRef50_B8FI63 Transcriptional regulator, LysR family n=1 Tax=D... 291 2e-77 UniRef50_Q1YDL8 Transcriptional regulator, LysR family n=1 Tax=A... 291 2e-77 UniRef50_A5W7U4 Transcriptional regulator, LysR family n=17 Tax=... 291 2e-77 UniRef50_UPI0001744D79 transcriptional regulator, LysR family pr... 291 3e-77 UniRef50_UPI000178A8A2 transcriptional regulator, LysR family n=... 290 3e-77 UniRef50_P42722 HTH-type transcriptional regulator cfxR n=9 Tax=... 290 4e-77 UniRef50_B5XVV4 Transcriptional regulator cynR n=5 Tax=Enterobac... 290 4e-77 UniRef50_A3VLP1 LysR family transcriptional regulatory protein n... 290 5e-77 UniRef50_C5BEX8 Transcriptional regulator, LysR family n=12 Tax=... 289 7e-77 UniRef50_A6DK62 Hydrogen peroxide-inducible genes activator n=1 ... 289 7e-77 UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=... 289 7e-77 UniRef50_Q127N6 Transcriptional regulator, LysR family n=1 Tax=P... 289 8e-77 UniRef50_A6F002 Transcriptional regulator, LysR family protein n... 289 8e-77 UniRef50_C3X7G6 Transcriptional regulator n=2 Tax=Oxalobacter fo... 289 8e-77 UniRef50_B8CTJ9 Regulatory protein, LysR:LysR, substrate-binding... 289 8e-77 UniRef50_B1Y3F3 Transcriptional regulator, LysR family n=2 Tax=B... 289 9e-77 UniRef50_A0KPM6 Transcriptional regulator, LysR family n=2 Tax=G... 289 1e-76 UniRef50_B9TDR3 HTH-type transcriptional regulator xapR, putativ... 289 1e-76 UniRef50_Q12AP3 Transcriptional regulator, LysR family n=4 Tax=B... 289 1e-76 UniRef50_B5WW96 Transcriptional regulator, LysR family n=2 Tax=B... 288 1e-76 UniRef50_A4J6T9 Transcriptional regulator, LysR family n=1 Tax=D... 288 1e-76 UniRef50_B0C1S6 Transcriptional regulator, LysR family n=2 Tax=C... 288 2e-76 UniRef50_A5D1Z5 Transcriptional regulator n=1 Tax=Pelotomaculum ... 288 2e-76 UniRef50_Q67KY5 LysR family transcriptional regulator n=1 Tax=Sy... 288 2e-76 UniRef50_C6NW00 Transcriptional regulator, LysR family n=1 Tax=A... 288 2e-76 UniRef50_A7IBY1 Transcriptional regulator, LysR family n=15 Tax=... 287 2e-76 UniRef50_A1S338 Transcriptional regulator, LysR family n=16 Tax=... 287 2e-76 UniRef50_A8ZUD0 Transcriptional regulator, LysR family n=1 Tax=D... 287 2e-76 UniRef50_Q7NCX0 LysR family transcriptional regulatory protein n... 287 3e-76 UniRef50_A6SW66 Transcriptional regulator, LysR family n=1 Tax=J... 287 3e-76 UniRef50_Q46SX0 Transcriptional regulator, LysR family n=4 Tax=B... 287 3e-76 UniRef50_B4ETA7 LysR-family transciptional regulator n=37 Tax=En... 287 4e-76 UniRef50_C6C982 Transcriptional regulator, LysR family n=1 Tax=D... 287 4e-76 UniRef50_Q67MJ1 LysR family transcriptional regulator n=1 Tax=Sy... 287 4e-76 UniRef50_Q1DBN8 Transcriptional regulator, LysR family n=2 Tax=C... 287 5e-76 UniRef50_B4CXF3 Transcriptional regulator, LysR family n=1 Tax=C... 287 5e-76 UniRef50_A3K7Z5 Regulatory protein, LysR:LysR, substrate-binding... 286 5e-76 UniRef50_Q2RZH0 Transcriptional regulator, LysR family n=1 Tax=S... 286 5e-76 UniRef50_C1DGS2 Transcriptinal regulator, LysR family n=1 Tax=Az... 286 6e-76 UniRef50_A0QNN2 Transcriptional regulator, LysR family protein n... 286 6e-76 UniRef50_Q46Q42 Regulatory protein, LysR:LysR, substrate-binding... 286 7e-76 UniRef50_B2JVU4 Transcriptional regulator, LysR family n=43 Tax=... 286 7e-76 UniRef50_B2Q0Q6 Putative uncharacterized protein n=1 Tax=Provide... 286 8e-76 UniRef50_Q21S72 Transcriptional regulator, LysR family n=2 Tax=C... 285 9e-76 UniRef50_C9YD50 RuBisCO operon transcriptional regulator n=1 Tax... 285 9e-76 UniRef50_C7RPQ0 Transcriptional regulator, LysR family n=1 Tax=C... 285 1e-75 UniRef50_B4CZS1 Transcriptional regulator, LysR family n=1 Tax=C... 285 1e-75 UniRef50_A8IAC4 Transcriptional regulator n=1 Tax=Azorhizobium c... 285 1e-75 UniRef50_C9YDU9 HTH-type transcriptional activator cmpR n=1 Tax=... 285 1e-75 UniRef50_Q13AV2 LysR, substrate-binding n=2 Tax=Alphaproteobacte... 285 1e-75 UniRef50_A9BVL3 Transcriptional regulator, LysR family n=3 Tax=C... 285 1e-75 UniRef50_A6UGP0 Transcriptional regulator, LysR family n=2 Tax=S... 285 1e-75 UniRef50_Q2RQL6 Transcriptional regulator, LysR family n=2 Tax=R... 285 1e-75 UniRef50_C4L1Y9 Transcriptional regulator, LysR family n=2 Tax=E... 285 2e-75 UniRef50_Q12DG5 Transcriptional regulator, LysR family n=1 Tax=P... 284 2e-75 UniRef50_B6IX78 Hydrogen peroxide-inducible genes activator n=1 ... 284 3e-75 UniRef50_B0T3V7 Transcriptional regulator, LysR family n=1 Tax=C... 284 3e-75 UniRef50_C8WSN1 Transcriptional regulator, LysR family n=1 Tax=A... 284 3e-75 UniRef50_Q3SGH4 Oxidative stress transcriptional regulator n=2 T... 283 5e-75 UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Sy... 283 5e-75 UniRef50_Q1GX89 Transcriptional regulator, LysR family n=13 Tax=... 283 6e-75 UniRef50_A1TN88 Transcriptional regulator, LysR family n=9 Tax=B... 283 6e-75 UniRef50_C6E9D5 Transcriptional regulator, LysR family n=8 Tax=D... 283 7e-75 UniRef50_Q1QWP3 Transcriptional regulator, LysR family n=1 Tax=C... 282 8e-75 UniRef50_D2QVQ4 Transcriptional regulator, LysR family n=22 Tax=... 282 8e-75 UniRef50_A1WRQ7 Transcriptional regulator, LysR family n=2 Tax=B... 282 9e-75 UniRef50_B4SKP4 Transcriptional regulator, LysR family n=24 Tax=... 282 9e-75 UniRef50_B7X0F3 Transcriptional regulator, LysR family n=1 Tax=C... 282 1e-74 UniRef50_Q46S95 Transcriptional regulator, LysR family n=2 Tax=B... 282 1e-74 UniRef50_D1RNC3 Transcriptional regulatory protein n=1 Tax=Serra... 282 1e-74 UniRef50_Q13QG4 Transcriptional regulator, LysR family n=4 Tax=B... 282 1e-74 UniRef50_C1A9Z7 LysR family transcriptional regulator n=1 Tax=Ge... 282 1e-74 UniRef50_Q0RXH6 Transcriptional regulator, LysR family protein n... 281 2e-74 UniRef50_B4UKP3 Transcriptional regulator, LysR family n=4 Tax=A... 281 2e-74 UniRef50_Q4ZY05 Regulatory protein, LysR:LysR, substrate-binding... 281 3e-74 UniRef50_A0QTM3 HTH-type transcriptional regulator AlsR n=7 Tax=... 281 3e-74 UniRef50_Q2BJH5 LysR-family transcriptional regulator n=1 Tax=Ne... 280 3e-74 UniRef50_A5G2D8 Transcriptional regulator, LysR family n=1 Tax=A... 280 3e-74 UniRef50_B6R6F6 Transcriptional regulator, LysR family n=1 Tax=P... 280 3e-74 UniRef50_D2Q131 Transcriptional regulator, LysR family n=1 Tax=K... 280 3e-74 UniRef50_A5VFC0 Transcriptional regulator, LysR family n=2 Tax=P... 280 4e-74 UniRef50_Q167Q4 Oxidative stress transcription regulator, oxyR, ... 280 4e-74 UniRef50_P0ACR6 Uncharacterized HTH-type transcriptional regulat... 280 5e-74 UniRef50_A9I810 Transcriptional regulator, LysR-family n=5 Tax=P... 280 5e-74 UniRef50_B4DCH5 Transcriptional regulator, LysR family n=1 Tax=C... 280 5e-74 Sequences not found previously or not previously below threshold: UniRef50_C6BXQ9 Transcriptional regulator, LysR family n=1 Tax=D... 287 4e-76 UniRef50_C3NNS3 LysR family regulatory protein CidR n=22 Tax=Vib... 280 3e-74 UniRef50_Q11BY5 Transcriptional regulator, LysR family n=1 Tax=C... 280 4e-74 >UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=Bacillales RepID=A9VF88_BACWK Length = 305 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 67/297 (22%), Positives = 137/297 (46%), Gaps = 1/297 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 ++ L+QL+ F+ V++E F+RA E++ +SQ ++S ++ LE+ G+ L DR +++ LT Sbjct: 7 ISIELRQLEYFLAVSKELHFTRAAEKLNISQPSLSQQIRALEHEVGMPLFDRIGKKISLT 66 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+ L + + E+ + G + + + T+ +L+P I + +++YP Sbjct: 67 EAGRVLLSHSKTIFHEVEQARSAIQDLNGLHHGSLTIGSLLTVVNYLLPPAILDFNKQYP 126 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +I+ + + E + Q ++D GI P ++ + L+ +L Sbjct: 127 NIELSVLGLRTGEIREKLLQNELDIGITFLPVQDKEIVSIPLYKSELTLVVPTSHSLTER 186 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 YV + LQ L+L LI + + + EI +L MVA G+GI+ Sbjct: 187 KYVSIEELQDYPLILLPKNFYLTELITSHCQNFNFKPKPILEISTMESLIQMVAQGMGIT 246 Query: 241 ILPALALP-LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 +LP + L +K P + L+ R+++ + A + ++ ++L Sbjct: 247 VLPKPYIDFLQNEHIQAIKIENPTPTIDIGLIYRRDKYMCAATRKFIEQLKITVHSL 303 >UniRef50_P39592 Uncharacterized HTH-type transcriptional regulator ywbI n=9 Tax=Bacillales RepID=YWBI_BACSU Length = 301 Score = 336 bits (864), Expect = 5e-91, Method: Composition-based stats. Identities = 72/291 (24%), Positives = 129/291 (44%), Gaps = 1/291 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++ L F+ VA+ KSF++A + + +SQ +S +K LE G+ L R R+V LTDA Sbjct: 1 MDIRHLTYFLEVARLKSFTKASQSLYVSQPTISKMIKNLEEELGIELFYRNGRQVELTDA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G + ++ + ++ + + + + G VR+ I + P+ + + YP++ Sbjct: 61 GHSMYVQAQEIIKSFQNLTSELNDIMEVKKGHVRIGLPPMIGSGFFPRVLGDFRENYPNV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 F L + V E + G +D G+V+ P I+ E L+ H LA E Sbjct: 121 TFQLVEDGSIKVQEGVGDGSLDIGVVVLPANEDIFHSFTIVKETLMLVVHPSHRLADEKE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L+ + I + G + +I+ E + MV+A +GI +L Sbjct: 181 CQLRELKDEPFIFFREDFVLHNRIMTECIKAGFRPHIIYETSQWDFISEMVSANLGIGLL 240 Query: 243 P-ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 P + L V+ + PV+ L ++ RK+R LS AA A + + Sbjct: 241 PERICRGLDPEKVKVIPLVDPVIPWHLAIIWRKDRYLSFAARAWLEHTKSY 291 >UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepID=A9W9P6_CHLAA Length = 301 Score = 336 bits (862), Expect = 7e-91, Method: Composition-based stats. Identities = 82/295 (27%), Positives = 133/295 (45%), Gaps = 1/295 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ F VA+ +RA + ++Q A+S + +LE G+ L DR R + LT+A Sbjct: 1 MELRHLRYFEAVARHSHVTRAAAELHIAQPALSKQISQLERELGITLFDRVGRSLRLTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L +L ++ +G+V + A T+ AHL+P + H+RYP I Sbjct: 61 GEALLPYARAILAQVEEARAAMAERIGLKAGRVTIGAPPTVGAHLLPPLLTIFHQRYPGI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 LH+ Q +++ + G D +V P L +L+EP L+ LA Sbjct: 121 TLRLHEAGIQSLLDLLEAGITDLAVVALPVTDEQLTVTPLLNEPLVLIVSTTHPLARRSE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V L+ + +L + R A G V E G TL VAAG+G+S++ Sbjct: 181 VMMTELRHERWILSPSSYELREATLKACREAGFTPQTVLEGGETETLVRFVAAGLGVSLV 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALM 297 PALA+ + + + R L LV R +R+ S AA AL + + ++ Sbjct: 241 PALAVA-GCTDVVRLTVSDQHLTRSLGLVWRSDRTASPAARALREFLVNEVRQRP 294 >UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AG49_CARHZ Length = 297 Score = 334 bits (857), Expect = 3e-90, Method: Composition-based stats. Identities = 84/297 (28%), Positives = 145/297 (48%), Gaps = 5/297 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + QL++F VA++KSFS A + +SQ A+S ++ LE + G +LLDRTT+ V LT A Sbjct: 1 MNRNQLEIFRVVAEKKSFSEAARLLHISQPAISMHIQALEEYYGTKLLDRTTKRVTLTPA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L LL ++ RD + + GK+ + AS TI H++P ++ +R+YPD+ Sbjct: 61 GEILYKYTLHLLSLMDKAQRDISQAAGIIKGKLILGASLTIGGHVLPPLLSSFYRKYPDV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + V+E + +D G V G+L EA+ + ++ + LA Sbjct: 121 NITMEIMNTEKVLERVSDLTLDLGFVEGEVTTGELHVEALARDELVVVVAANHPLAGRGR 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGI---QANIVQEIGHPATLFPMVAAGIGI 239 + W+ L LV+++ SG+R +I+ L G + IV E+G + V AG+G Sbjct: 181 ISWEELATLPLVMREPGSGTRKVIEERLQAAGFKLPELKIVMELGSTEAIKGAVEAGLGA 240 Query: 240 SILPALALPLPEGSPLV--VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 +IL + + + + R+ +V N+ S A +AL R+ + Sbjct: 241 AILSKWTVRREINWGIFKQLLIENLPIYREFYVVLNNNKFHSPATQALIQFCREHLS 297 >UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945AE Length = 303 Score = 334 bits (857), Expect = 3e-90, Method: Composition-based stats. Identities = 76/297 (25%), Positives = 141/297 (47%), Gaps = 1/297 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++ LK F+ V + KSF++A + + ++Q +S +K +E+ GV LLDR+T++V+LTDA Sbjct: 7 LDIRHLKYFIEVVRCKSFTKAADVLHITQPTISKMIKNIEDELGVVLLDRSTKQVMLTDA 66 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ + L+ ++++ + + GK+R+ + + P I E H +YP+I Sbjct: 67 GQSILLQAQQIVKSFENLSIELANTIHLKKGKIRMGLPPMVGSRFFPHIIGEFHHKYPNI 126 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L + + V E + +G +D G+V+ P P G + E ++ + LA + Sbjct: 127 EIQLIEEGAKKVEEQVEEGHLDIGVVLLPIPSGTFDSFPFVHEKLMVVVYPKHRLAGQTV 186 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + L+ +L I R G Q +V E + MVAAG+GIS+L Sbjct: 187 IALKKLEHEPFILFREGFVLHDRIPEECIRAGFQPKVVYESSQWDFISEMVAAGLGISML 246 Query: 243 PAL-ALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 P L + + + P ++ L ++ K + +S A + V+ + A Sbjct: 247 PESICRELNPNRVITIPLVEPSIDWSLAMIWPKEQYISYAVREWINFVKQRLQPKEA 303 >UniRef50_P0ACR7 Uncharacterized HTH-type transcriptional regulator yfeR n=158 Tax=Proteobacteria RepID=YFER_ECOLI Length = 308 Score = 333 bits (856), Expect = 4e-90, Method: Composition-based stats. Identities = 308/308 (100%), Positives = 308/308 (100%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT Sbjct: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP Sbjct: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE Sbjct: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS Sbjct: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR Sbjct: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 Query: 301 EGDPLYQI 308 EGDPLYQI Sbjct: 301 EGDPLYQI 308 >UniRef50_UPI0001745DD5 transcriptional regulator, LysR family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745DD5 Length = 290 Score = 330 bits (847), Expect = 4e-89, Method: Composition-based stats. Identities = 71/290 (24%), Positives = 127/290 (43%), Gaps = 1/290 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L QL+ V VA+ +FSRA + +SQ ++S +++LE+ G RL DR R LT A Sbjct: 1 MELHQLRYMVAVARTGNFSRAAQTCHVSQPSLSQQIQKLEDELGERLFDRLRRHAKLTQA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G++ R R+L+E+++ R+ G++ V TI+ +L+P+ IA +YP + Sbjct: 61 GERFLPRAVRILEEMDAATREARAANDLDQGRITVGVLPTIAPYLLPKLIAAFSAKYPGV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 Q V+H+ + E +VD I P + + E L + L + Sbjct: 121 QVVVHEDTTARLRELTAACEVDIAIASLPLQDERFEVRELFDEELLLALPNNHRLVDQKK 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + L K +L + R + T+ +V +G+GI+++ Sbjct: 181 IIPEDLLEEKFILMKEGHCLGDQVLHFCHRQDFHPQVSCRSAQMETVQSLVQSGMGITLV 240 Query: 243 PALALPLPEG-SPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 P +AL P+ P +R ++ + R L AA A ++ + Sbjct: 241 PRMALQEDRSVKPVYRSLSDPSPKRTIVAFWPRQRPLGKAAAAWLKLMEE 290 >UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Bacillales RepID=C6IV95_9BACL Length = 305 Score = 324 bits (831), Expect = 3e-87, Method: Composition-based stats. Identities = 76/294 (25%), Positives = 136/294 (46%), Gaps = 2/294 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ FV VA+++ ++A E + ++QSAVS + +LE GV L + R + LT Sbjct: 1 MELRQLQYFVKVARKEHVTQAAEELHVAQSAVSRQIHQLEQELGVNLFMQKGRNLHLTAV 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ R+E +L +L+ + + G++R+ ++ H+IP +AE + YP++ Sbjct: 61 GQLFCSRVEMILKDLDRAVSEVHEFLDPEQGEIRLGFPNSLGIHMIPSVVAEFRKLYPNV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVID-PGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 +F ++ + G+VD + P + +L+E + LA E Sbjct: 121 KFRFRQGTYPTLIRDVVSGEVDLAFISPFPENHDQVTGNVVLTEDLVAILPPGHPLAGEQ 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + L+ K +L RP++ A G I E T+ +VAAG+G+S+ Sbjct: 181 SIKLSQLKDEKFILFSKGYSLRPIVWHACLEAGFTPKIAFEGEETDTIRGLVAAGMGVSL 240 Query: 242 LPALAL-PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 LP +AL P+ V+ P V R + L+ R + L A++ + + Sbjct: 241 LPEMALFQSFTLQPIRVRISEPKVTRTIGLIHRVDEKLPLVAQSFRMFLLEYFG 294 >UniRef50_Q3AG03 Transcriptional regulator, LysR family n=2 Tax=Clostridia RepID=Q3AG03_CARHZ Length = 302 Score = 323 bits (829), Expect = 6e-87, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 135/293 (46%), Gaps = 2/293 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +QL+ F V++ SF+RA E++ ++Q +++ ++ LE V+L DR+ R+VVLTD Sbjct: 1 MEFRQLEYFYAVSKLNSFTRAAEQLHVAQPSITIAINNLEQELKVQLFDRSKRKVVLTDE 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ +E++L ++ + + G +++ I A+L P+ YP + Sbjct: 61 GKLFLQHVEKILKDVKKAQSELEDLKNYKKGVIKLGIPPMIGAYLFPKIFKGFKNAYPHL 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + ++ + G++D G++I P +L I + L + + E Sbjct: 121 ELHVREEGSWAMVSLLENGELDLGLIILPEQSENLCMLPITKDQIVLCVSENHRFSQEKR 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + L+ + +L S +R I A G NI+ T+ +V+ G+GI+ L Sbjct: 181 ISLRQLEDEQFILLKEDSYTRHKIIALCNYYGFSPNILLSSCQIETIKELVSNGLGITFL 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 + + ++ P + + L +K+R LS AA+A V++ + Sbjct: 241 -MNGITKKWDKIVSIQLEEP-MNITIGLAWQKDRCLSRAAQAFIGFVQNYTKS 291 >UniRef50_C0ZCK2 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZCK2_BREBN Length = 295 Score = 322 bits (828), Expect = 7e-87, Method: Composition-based stats. Identities = 78/294 (26%), Positives = 136/294 (46%), Gaps = 3/294 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+Q++ + VA+E+SFSRA R+ L+Q ++S + +LE GV L R + V LTDA Sbjct: 1 MELRQIRYVLAVAEERSFSRAANRLHLAQPSLSQQIAKLEKILGVSLFHRLPQHVELTDA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ+ + L+D R+ SGK+ V + A+++P+ + +++P + Sbjct: 61 GQRFIQVAQTLVDMSEGLEREMRAYAVGESGKLLVGSLPITGAYVLPRVLPTFTKQFPGV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L + + + + +G +D ++ P L+ ++E FL + LA Sbjct: 121 ELQLMEETSSHLEQLLVRGKIDVSLLTMPISDPSLEIIPAINEEIFLAVPANHPLAKRKE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V + +L G R + + G + IV E + T +VAAG+G+S Sbjct: 181 VDLAEVADQPFILLKEGQGFRTISLRLCEQAGFRPRIVFESSNIQTAQSLVAAGMGLSFA 240 Query: 243 PALA--LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 P + P P V+ T R L++ RK++ LS AEA + +QG Sbjct: 241 PKMITLAPGTIEPPTYVRIKT-KPSRTLVVAYRKDKPLSRPAEAFVQCLIEQGG 293 >UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CY97_PAESJ Length = 305 Score = 322 bits (828), Expect = 8e-87, Method: Composition-based stats. Identities = 75/296 (25%), Positives = 135/296 (45%), Gaps = 2/296 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL FV VA+++ ++A E + ++QSAVS + +LE GV+L + R + LT Sbjct: 1 MELRQLYYFVKVAKKEHVTQAAEELHVAQSAVSRQIHQLEEELGVKLFLQKGRNLQLTPV 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ R E +LD+L + + G++R+ ++ ++PQ +A + +P++ Sbjct: 61 GQLFLKRAEVILDDLERAVVEIHEFMDPEKGEIRLGFPHSLGVSVVPQVVAAFRKLHPNV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVID-PGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 +F ++ + +G++D + P + E +L+E F + LA E Sbjct: 121 KFRFRQGMYPSLIRDMVKGEIDLAFISPFPDEHEQVCGEVLLTEELFAILPPSHPLAGEQ 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + L+ V+ RP++ A G I E T+ +VAAG+G+S+ Sbjct: 181 EIDLIQLKEDTFVMFSEGYSLRPIVWEACQEAGFTPKIGFEGEETETIRGLVAAGMGVSL 240 Query: 242 LPALALPLPE-GSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 LP +AL V+ TP V R + ++ R N + A+ + N L Sbjct: 241 LPEMALYHAGVLQSAKVRVRTPNVTRNIGIIHRSNEKMPLVAKVFHGFLLRYFNEL 296 >UniRef50_C6CYG5 Transcriptional regulator, LysR family n=2 Tax=Paenibacillus RepID=C6CYG5_PAESJ Length = 297 Score = 321 bits (823), Expect = 3e-86, Method: Composition-based stats. Identities = 76/287 (26%), Positives = 130/287 (45%), Gaps = 2/287 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ + +A EK+FSRA E++ ++Q ++S + +LE GV L RTT V LT A Sbjct: 1 MELRQLQYVIQIAIEKNFSRAAEKLHIAQPSLSQQLSKLEQELGVLLFRRTTNSVELTQA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ + + +LD + ++ M Q G++ V +H++P + YP I Sbjct: 61 GQVFVDKSQSILDAIEQLKQEMDDMAQMKRGRLVVGTLPITGSHILPLVLPVFGELYPQI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE-D 181 + +L + + + G D ++ P L+ E ++ E L LA D Sbjct: 121 EVILVEDTTVKLEQLTANGGTDISLLTLPLVDQTLEWEPLMEEEICLAVPPSHRLAGRTD 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + + L+ V G R ++ + G NIV E + T+ ++A G+GI+ Sbjct: 181 EISIEELREEHFVGLKKGQGFRQILVHLCQQAGFTPNIVFESSNIETVQSLIAGGMGITF 240 Query: 242 LPALALPLPEGSPL-VVKRITPVVERQLMLVRRKNRSLSTAAEALWD 287 +P + G + V + R L++ RK R LS AA A + Sbjct: 241 VPKMLTRAAGGDFVPVYLSLKDRPSRTLIIASRKGRYLSKAAVAFIE 287 >UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=Geobacter RepID=B5EGJ2_GEOBB Length = 300 Score = 319 bits (819), Expect = 7e-86, Method: Composition-based stats. Identities = 74/293 (25%), Positives = 123/293 (41%), Gaps = 2/293 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++QL+ F+ VA+ K+F++A E + ++Q AVS +VK+LE + L +R ++V LT Sbjct: 1 MDVRQLRYFIEVAKVKNFTKAAEALHIAQPAVSMAVKKLEQELELSLFNRQDKKVSLTAE 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ +R+LD+L + + + G+VR+ ISA+ P I + + YP + Sbjct: 61 GEIFLPHAKRILDDLRAAELEMAELKGLSKGEVRLGIPPMISAYFFPDIIRDFKKSYPQL 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + I QG++D G+V L+ L E + D A Sbjct: 121 HLSVLGEGAWRIQKMIGQGELDMGVVAGGNFPETLEVRRFLREEIVICVPPDHPFAQRKS 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V LV R L G NIV E + + +V G GISI Sbjct: 181 VSLVEFIREPLVFYKEGYYIREFFLEVLKGAGSAPNIVFETNLFSLVKSLVRNGTGISIF 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 + + LV P + L++ +K+ LS A A D + Sbjct: 241 LRMVVAADTD--LVAVPFDPPLHLDLLIAWKKDTYLSLANRAFVDFLLQHAAE 291 >UniRef50_A0L4T1 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=A0L4T1_MAGSM Length = 307 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 80/303 (26%), Positives = 149/303 (49%), Gaps = 5/303 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M++S +L+VF VA+ SF+RA E + L+Q AV+ +++LE H RL DR + LT Sbjct: 1 MSFSDTRLRVFYAVAKHLSFTRAAEELYLTQPAVTFQIRQLEEHFDTRLFDRHHNRISLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG ++ ER+LD T + + G V+V AS TI +L+P+ +++ ++ Sbjct: 61 EAGLEVYSYAERILDLYRETEKAVSELTGVTRGVVKVGASTTIGEYLLPRILSDYRDQFN 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 D+Q L + V+ + +D G++ P ++ + L + ++ + L Sbjct: 121 DVQIRLSIDNTRTVVRKLEDATIDVGMIEGPVKNKNIARDGCLDDELVVILPPNHPLCDL 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGI---QANIVQEIGHPATLFPMVAAGI 237 D +P + L+ V ++ SG+R ++ L G+ Q +IV E+G + V GI Sbjct: 181 DEIPVKELKAYPFVSREEGSGTRQVVHDHLLHAGLPYDQLDIVLELGSTEAVKGSVEGGI 240 Query: 238 GISILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 GI I+ + +L L G + + + R + + +K + S A EA + +D Sbjct: 241 GIGIVSSASLIKELKLGILVAKRVQGMRITRTINFIHQKQKFRSKAVEAFINFAKDHCKH 300 Query: 296 LMA 298 +++ Sbjct: 301 MVS 303 >UniRef50_UPI00016C47B2 transcriptional regulator, LysR family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C47B2 Length = 291 Score = 317 bits (815), Expect = 2e-85, Method: Composition-based stats. Identities = 80/293 (27%), Positives = 131/293 (44%), Gaps = 6/293 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENH---TGVRLLDRTTREVVL 59 L QL+ FV VA+ SF+RA ER ++Q +S + LE+ G RL DR R+VVL Sbjct: 1 MELHQLRYFVAVAETGSFTRAAEREDVTQPTLSEQIMRLESKPHGVGRRLFDRLGRKVVL 60 Query: 60 TDAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRY 119 TDAG++L + +L + R + G +RV A TI+ L+P + + + Sbjct: 61 TDAGRELLGHAQGILAAVKEAERAVRDSAEG--GSLRVGAIPTIAPFLLPGTVTRFRKDH 118 Query: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 P++Q L + + ++ + G++D ++ P L E + +EP + LA Sbjct: 119 PNVQLQLKEDLTERLLADLLAGELDVALMAMPVRDDRLHVEKLFAEPLVMALPAKHELAS 178 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 + V + +L D + + R G++ +V TL MVAAG G+ Sbjct: 179 KTEVKLADVLEEPFILLDDMHCFGDQVLSLCHRGGLEPRVVCRGEQIVTLLAMVAAGQGV 238 Query: 240 SILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 SI+P +A + + P R L V K R + AL D+ + Sbjct: 239 SIVPEMAATADTSKQCAYRPLGKPTPVRTLCAVWHKQRFRPPSLRALVDMAKR 291 >UniRef50_A4J1K6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1K6_DESRM Length = 308 Score = 317 bits (814), Expect = 3e-85, Method: Composition-based stats. Identities = 75/294 (25%), Positives = 150/294 (51%), Gaps = 5/294 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M SL Q +F TVA +KSFS A + + +SQ AVS +K LE+H +L DR T++V +T Sbjct: 1 MLLSLYQFHIFKTVADKKSFSGAAQALYISQPAVSMHIKALEDHFRTKLFDRNTQQVTIT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+ L +++L+ ++ D R + G + + AS T+ ++IP+ + ++ +P Sbjct: 61 EAGRILYKYADKILNLIDQAENDISRFTGNIEGPLSIGASFTVGEYVIPKILGTFNKEHP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ +L + ++ + + ++D G++ + +L + L + ++ D L+ Sbjct: 121 QVRALLQVTNTEQIVNLVLKQEIDLGLIENQVNKTELVAKPFLQDELIIVIPPDYPLSEH 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGI---QANIVQEIGHPATLFPMVAAGI 237 ++ + L LV+++ SG+R + +A L G+ NIV E+G + V AG Sbjct: 181 QFISMEDLVALPLVMREQGSGTRKITEARLIEEGVDLNTLNIVMELGSTEAVKEAVEAGF 240 Query: 238 GISILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 G +I+ A+ L G+ + V+ + R+ L+ +++ +T E + Sbjct: 241 GTTIISKWAVQKELKLGTLVPVRFKDISLFRKFYLIYHRDKFQTTVVEEFITFL 294 >UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYF2_THERP Length = 299 Score = 317 bits (814), Expect = 3e-85, Method: Composition-based stats. Identities = 97/294 (32%), Positives = 149/294 (50%), Gaps = 2/294 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ SL+QL+VF +VA+ +SFSRA E + +SQ AVS +K LE GV L RT R V LT Sbjct: 1 MDVSLRQLQVFRSVARHRSFSRAAEDLVISQPAVSAQIKSLEQVLGVPLFQRTGRGVELT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+QL ERLL+ L+ L + G+VRVAAS T +++P+ + HR YP Sbjct: 61 EAGRQLLPYAERLLNLLDEALAAVHELRCAQRGQVRVAASTTAGIYVVPKALGAFHRAYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ L + V + + GD D I+ DL+ E L ++ LA Sbjct: 121 GVELSLDVLNRFAVHQRLLAGDADVAIMGLIEDPQDLEIEQFLPNELVVIASPRHHLARR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 +P + ++++ SG+R ++ A G+ + E+ + VAA +G++ Sbjct: 181 HQIPLDEIAREPFLVREIGSGTRADMERIFAEAGLSPRVAMELRSNGAIKQAVAADLGVA 240 Query: 241 ILPALA--LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 ++P A L L G +V+ V R LVRR R S AA+ALW+ + Sbjct: 241 VMPRDAIGLELETGRLIVLDVQGFPVRRWWSLVRRAGRQPSAAADALWNFLLQY 294 >UniRef50_C6P9X7 Transcriptional regulator, LysR family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P9X7_CLOTS Length = 297 Score = 316 bits (812), Expect = 6e-85, Method: Composition-based stats. Identities = 71/291 (24%), Positives = 147/291 (50%), Gaps = 2/291 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ + ++L +F++V + S S A + ++Q A+S ++ ELE ++L DR +++VLT Sbjct: 1 MDMNFRELNIFLSVCELGSMSEAARHLYMTQPAISQAISELEGEYNIKLFDRIGKKLVLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG+ L +++ LN + GK+++ AS+T+ +L+PQ I E + Y Sbjct: 61 HAGEILRDYGKKINLLLNEAENTLRDISDMKMGKLKLGASRTVGTYLLPQLIGEFLKIYK 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +I+ + +++ I + ++D GIV P +++ + L + +L+C +D A + Sbjct: 121 NIELPFYIDNTSEIVKMIHENEIDLGIVEGPIHSDNIEVKYFLDDELYLICSKDHNWAKK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + L +++++ SG+R + + L + I+ NI E+ + V A +G+S Sbjct: 181 KIINKDDLSLENIIIREVGSGTREVFENTLKAHNIEYNIKLELNSTEAIKRAVEANLGVS 240 Query: 241 ILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 ++ LA+ L + V+ RQL ++ K++ LS + D + Sbjct: 241 VISKLAIKEELKSSRLVKVEIDGVKFLRQLNIIYHKDKYLSELCKKFIDFL 291 >UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=Proteobacteria RepID=A1WVW1_HALHL Length = 318 Score = 316 bits (810), Expect = 9e-85, Method: Composition-based stats. Identities = 84/298 (28%), Positives = 146/298 (48%), Gaps = 3/298 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+VF +VA+ SF+RA E + L+Q AVS +K+LE G+ L ++ + + LT Sbjct: 1 MNITLRQLQVFESVARHLSFTRAAEELYLTQPAVSMQIKQLEQQVGLPLFEQIGKRIYLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+++ +R+ EL + SG++R+ + + + +A RR P Sbjct: 61 EAGEEVRRYAQRISAELRELADGLEALRGLNSGRLRL-TVASTANYFATDLLAAFTRRQP 119 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + F L ++ V+ I+ ++D ++ P D+ EA + P ++ D LA Sbjct: 120 GVTFQLEVTNREGVIRRIQDNEMDLAVMGRPPEGLDVAAEAFMPNPLVIIAAPDHPLADG 179 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 +P + LQ VL++ SG+R + L G+ E+ + V AG+G+ Sbjct: 180 SPIPLERLQDELFVLREQGSGTRNAVQRVLEERGMNLRGGLEMSSNEAIKQSVQAGLGLG 239 Query: 241 ILP--ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 ++ +AL L G V+ +ERQ LV R + LS AAEA + D+ + Sbjct: 240 VVSIHTVALELELGRLRVLNVEGFPLERQWYLVHRSGKRLSPAAEAFRQFILDEAHRH 297 >UniRef50_Q65GU9 Transcriptional regulator YbbE n=2 Tax=Bacillus subtilis group RepID=Q65GU9_BACLD Length = 299 Score = 315 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 74/292 (25%), Positives = 133/292 (45%), Gaps = 1/292 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L Q+ F+ V++ K F++A +SQ A+S S+K+LE GV L R T+ + LT Sbjct: 1 MELYQIDHFIAVSRHKHFTKAALEQRISQPALSRSIKKLEEELGVPLFIRKTKSIRLTKY 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+Q ++ ++ L+ ++ +G++ V+ T+ + L+PQ IAE ++YP++ Sbjct: 61 GEQFLIKAKQARLALDEGVQQIRESVNPNAGEISVSFLHTLGSRLMPQLIAEFKKKYPNV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 F L+ + + + G+ D + P P L+ + +EP +L+ D LA Sbjct: 121 AFRLYQAANEHLQHMVETGEADICLSSPPLPNEHLEWTVLDTEPLYLVLPADHPLADRKE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V +++ V G R + D I + E +T+ +V+AG+G++IL Sbjct: 181 VAIRSIAHEDFVCFKPGYGLRYVFDQMCRGLSISPKLAFEGEEVSTILGLVSAGLGVAIL 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 P A + ER + L K+ LS AA + V + Sbjct: 241 PKTA-EHVHSPVAFCRVSDYRSERTIGLAVLKDHYLSPAARNFKEFVIEYYR 291 >UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Proteobacteria RepID=B9JIM7_AGRRK Length = 306 Score = 315 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 161/291 (55%), Gaps = 1/291 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +N + L+ F V + +SF RA E + +SQ A++ +++LE G LLDRTTR V T Sbjct: 3 INCEILDLRAFQAVVELESFHRAAEALHISQPALTRRIQKLEQSIGAPLLDRTTRHVAPT 62 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 GQ++ + R+L+E + +L G Q G + +A T + + +P I R YP Sbjct: 63 ATGQEMIPLVRRMLEEFDGSLFAIKDSGSQRRGLITMACVPTAAFYFLPTVIRTFGRDYP 122 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ + D ++++ +G+V+FGI + DL E ++ +PF L +D LA Sbjct: 123 HIRLRIRDLTANEGLQAVARGEVEFGINLMGNSDPDLSFEPLIDDPFVLAMRKDHPLAAF 182 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 D + W L+G LV+ D +SG+R L+DAALAR ++ N E+ H T +V AG+GIS Sbjct: 183 DEIHWNQLEGHPLVVVDRSSGNRTLLDAALARANLRLNWFYEVTHLNTSLGLVEAGLGIS 242 Query: 241 ILPALALPLPEGS-PLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 +LP LA P E + + PVV R + +VRR++ +LS AA+ D++ Sbjct: 243 VLPRLATPQEEHPFLVTRPIVNPVVTRTIGIVRRRSATLSPAADRFIDMLL 293 >UniRef50_Q1IRZ3 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRZ3_ACIBL Length = 296 Score = 315 bits (808), Expect = 1e-84, Method: Composition-based stats. Identities = 74/296 (25%), Positives = 130/296 (43%), Gaps = 1/296 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + QL+ F VA+ +F+RA E ++Q ++S + +LE G RL DR R LT Sbjct: 1 MEVHQLRYFCAVARHGTFTRASEVEHVAQPSLSQQILKLEAELGARLFDRLPRSAKLTVF 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ ER+L +L+ + M G+V V TI+A+L+P+ + R+PD+ Sbjct: 61 GKAFLPNAERILRQLDEAKTELLEMTSNEKGEVTVGIIPTIAAYLLPKLLNGLSVRHPDV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + +++ + G +D I P P +L E + E F+ + A Sbjct: 121 TVKISEDITPVLLQRLHDGSIDMAIAALPIPGTELASEELFEEKFYAVLPEKHRRASRAS 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L +L R + AA + + ++V E G AT+ MV+AG+G+S + Sbjct: 181 ISLADLNREPFLLLKEGHCFRDSVIAACNQAAMSPSVVFESGQFATILAMVSAGMGVSAV 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 PA+A+ P + R++ +V ++ A L +RD Sbjct: 241 PAMAVQ-PHPGCKFIPISGKHSSRKVGIVTSRHHFQGRAQRLLLKQMRDACGKSAK 295 >UniRef50_B1KU62 Transcriptional regulator, LysR family n=10 Tax=Clostridium RepID=B1KU62_CLOBM Length = 293 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 141/290 (48%), Gaps = 2/290 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + ++L++F VA++ + + E++ +SQ AVS ++ ELE+ GV+L DR R + LT+ Sbjct: 1 MNERKLRIFYEVAEKLNMTEVAEKLYISQPAVSQTILELESELGVKLFDRINRRLYLTNE 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + R+L+ + +R + +GK+++ AS TI +++P I + ++Y I Sbjct: 61 GELFLNYVRRILNMYDDAIRSLKDINSLKTGKLKIGASTTIGIYILPDIIGKFTKQYKGI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + + I +DF V P ++ E + + + + +D Sbjct: 121 DTSIAIENTKLISDMILDNSIDFAFVEGPVYNEEIIKENFCDDELVFITSPEHPWSNKDE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + K+++++ SG+R + ++ + N + NI E+G+ + V AG+G+S + Sbjct: 181 ISITEVDKEKIIMREIGSGTREVFESYMTANNVNYNIAFELGNTEAIKKAVEAGLGVSCI 240 Query: 243 PALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 + + + K ++R+L+L+ K++ LST + Sbjct: 241 SKRCIKNEINNNTLSWTKLKEFEIKRKLILIYHKDKFLSTLLKTFIKFAL 290 >UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZY7_9GAMM Length = 318 Score = 313 bits (804), Expect = 4e-84, Method: Composition-based stats. Identities = 98/295 (33%), Positives = 157/295 (53%), Gaps = 1/295 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN SL+QL+ FVT+AQ +SF+ A E + LSQ A+S ++K +E TG L R+TR + L+ Sbjct: 21 MNVSLRQLRAFVTLAQSQSFAEASELLHLSQPALSVAIKNMEQETGGSLFSRSTRSLQLS 80 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+Q RLL + + D GR GK+RVA + + + P+ +A R YP Sbjct: 81 PEGRQFLPVARRLLADWDQAFDDLGRAFNLQQGKIRVAVMPSFAMNQFPEALAPFQREYP 140 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 DI + D + V++++R+G V+ GI +P + L+ + ++ + L H S LA Sbjct: 141 DINISVEDVVMESVIDAVREGQVELGITFEPDQMDGLEFTPLFTDRWIALVHPKSPLAAR 200 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W AL + + S SR + AL+ G+ + E AT+ MV+ G+G + Sbjct: 201 KKLSWTALMEEPFIAMNRGSWSRNTTEKALSEAGVTPTRLLEANQLATIGRMVSVGLGTA 260 Query: 241 ILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 ++P L E ++ K I P +ERQ+ + RK RSLS AA+AL + + + Sbjct: 261 VVPQLCRQQMESLGILCKTIGRPSIERQVGIFTRKRRSLSGAAQALIAHLLEHFS 315 >UniRef50_P20668 HTH-type transcriptional regulator gltC n=17 Tax=Bacillales RepID=GLTC_BACSU Length = 300 Score = 313 bits (804), Expect = 4e-84, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 135/296 (45%), Gaps = 2/296 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ F+ VA+ + S A + + ++QSA+S + LE V L +R R + LT Sbjct: 1 MELRQLRYFMEVAEREHVSEAADHLHVAQSAISRQIANLEEELNVTLFEREGRNIKLTPI 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G++ + ++ + ++ G V++ ++++ L+P I+ YP + Sbjct: 61 GKEFLIHVKTAMKAIDYAKEQIDEYLDPHRGTVKIGFPTSLASQLLPTVISAFKEEYPHV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVID-PGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 +F+L ++++E++R D+D ++ P D+ + + +E + L + LA + Sbjct: 121 EFLLRQGSYKFLIEAVRNRDIDLALLGPVPTNFSDITGKILFTEKIYALVPLNHPLAKQK 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V L+ + VL R + + G + E + +V+AG+G+++ Sbjct: 181 TVHLIDLRNDQFVLFPEGFVLREMAIDTCKQAGFAPLVSTEGEDLDAIKGLVSAGMGVTL 240 Query: 242 LPALALPLPEGSPLV-VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 LP V + P V+R + +++ KNR L+ +A ++ V + L Sbjct: 241 LPESTFAETTPRFTVKIPIEFPQVKRTVGIIKPKNRELAPSANDFYEFVIQFFSKL 296 >UniRef50_Q31FC6 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=Q31FC6_THICR Length = 318 Score = 313 bits (803), Expect = 5e-84, Method: Composition-based stats. Identities = 73/295 (24%), Positives = 142/295 (48%), Gaps = 6/295 (2%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 ++L+VF TVA+ SF++A E + ++Q AV+ VK+LE RL DRT ++ LTDAG+ Sbjct: 4 RRLQVFYTVAKVLSFTKAAETLHMTQPAVTFQVKQLEEFFNTRLFDRTHNKITLTDAGKI 63 Query: 66 LALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFV 125 + E++LD + + +++G + + AS TI+ +++P + +++ D+ Sbjct: 64 VYDYAEKILDHYEKMNSEVRELTGEVTGSLLIGASTTIAEYMLPSLLGAFKKQFEDVNIR 123 Query: 126 LHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPW 185 L ++ + +D G+V P +L+ E + L+ L+ D + Sbjct: 124 LQVGNTDAIVAMVENNMIDLGVVEAPVYNKNLEVEVCRLDEMVLIVPHGHPLSNRDKISI 183 Query: 186 QALQGAKLVLQDYASGSRPLIDAALARNGIQ---ANIVQEIGHPATLFPMVAAGIGISIL 242 + ++ + + ++ SGSR +ID + G+ N+V E+G P + V + +G++I+ Sbjct: 184 EDMRKYRYISREEGSGSRSVIDNYIREQGLSYSDLNVVMELGSPEAVKMAVESDVGLAIV 243 Query: 243 PALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 + L G+ + P + R VR+K++ A L D D Sbjct: 244 SRTTISKELKLGTLKALPL-DPPLNRPFSHVRQKHKFRHRAVGELLDFAVDYCKE 297 >UniRef50_B7IPY3 Transcriptional regulator, LysR family n=74 Tax=Bacillales RepID=B7IPY3_BACC2 Length = 300 Score = 313 bits (803), Expect = 6e-84, Method: Composition-based stats. Identities = 69/298 (23%), Positives = 134/298 (44%), Gaps = 6/298 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L QLK F TVA+ + ++A E + ++Q ++S ++ LE GV L DR R++ L Sbjct: 1 MELLQLKYFQTVARLEHMTKAAEELHIAQPSLSKTIARLEKDLGVPLFDRQGRQITLNSF 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ R+ER+ EL+ R+ + + G + +A S ++P+ + R +P++ Sbjct: 61 GKVFLKRVERIFHELSEGEREIKDLAELQQGSITMAVS---IPRILPELLGSFLREHPNV 117 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 +F + + ++DF + P ++ E +++E FL+ L+ + Sbjct: 118 RFQQFLASTPSMKRQLENMEIDFCLSSVPVEGEEIVWEPLITEEIFLVVPSGHRLSNRES 177 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + ++ + + G R L D G +I E+ P + ++ G+GI+ + Sbjct: 178 IHLHEVKDEPFISMNTGYGFRHLTDEFCKEAGFTPHIAFEVDEPTVISDLIKQGLGIAFV 237 Query: 243 PALALPLPEGSPLV--VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 P L L L + ++ I P +R + L K R LS A+ + V D + + Sbjct: 238 PNLTL-LKNSTLAANKLRIIEPACKRTIGLSWSKKRYLSKTAQQFREFVIDYFSNIRT 294 >UniRef50_Q9F1R2 HTH-type transcriptional activator cmpR n=38 Tax=Bacteria RepID=CMPR_SYNE7 Length = 323 Score = 313 bits (803), Expect = 6e-84, Method: Composition-based stats. Identities = 70/299 (23%), Positives = 130/299 (43%), Gaps = 3/299 (1%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N +L QLKVF A+ SF+RA E + L+Q VS VK+L G+ L ++ + + LT+ Sbjct: 3 NLTLHQLKVFEAAARHSSFTRAAEELYLTQPTVSIQVKQLTKAVGLPLFEQIGKRLYLTE 62 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 AG+QL ++ ++L + G++R+A T + + IP+ I +RYP Sbjct: 63 AGRQLYKTTRQVFEQLEQLDMTIADLQGMKQGQLRLAVITT-AKYFIPRLIGPFCQRYPG 121 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 I L + ++ I D ++ P D+ + L P ++ LA + Sbjct: 122 INVSLKVTNHEGLINRINDNLDDLYVLSRPPSGFDITVQPFLDNPLVVVGPASHPLANQR 181 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + + L +L++ SG+R + A + + N+ ++G + + G+G+++ Sbjct: 182 GISLERLAQEPFILRERGSGTREATEQLFAAHNLNLNVKLDLGSNEAIKQAILGGLGLAV 241 Query: 242 LPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 L L + + + RQ V + LST A D + + + A Sbjct: 242 LSYHTLTSAGATPELKMFEVEGFPIHRQWHAVYPAGKQLSTVAATFLDYLLTESQRIAA 300 >UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHB2_MOOTA Length = 297 Score = 312 bits (802), Expect = 7e-84, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 132/278 (47%), Gaps = 5/278 (1%) Query: 7 QLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQL 66 QL F VA++KSFSRA + L+Q A+S ++ LE + G RLLDR R+V LT+AG+ L Sbjct: 5 QLLTFKAVAEQKSFSRAARVLHLTQPAISLHIQSLEEYFGTRLLDRNNRQVTLTEAGRVL 64 Query: 67 ALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVL 126 L + + + ++ G + V A+ TI + +P E R+YPD++ L Sbjct: 65 YNYALELSRLYDEVKKALADISGKVKGNLVVGATLTIGEYFLPSIAGEFKRQYPDVEITL 124 Query: 127 HDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQ 186 Q ++ G++D ++ +L E + + L+ H + A + + Sbjct: 125 RIANTQEIICRTLDGELDLALIEGQAKHPNLIQEDLFQDELVLIIHPEHRWAGRREITPE 184 Query: 187 ALQGAKLVLQDYASGSRPLIDAALARNGI---QANIVQEIGHPATLFPMVAAGIGISILP 243 L+ L+L++ SG+R + +A L + G+ +V E+G + V AG+G++I+ Sbjct: 185 ELREEPLILREEGSGTRQITEAGLRKAGLELSTLKVVMELGSTQAIKEAVEAGLGVAIIS 244 Query: 244 ALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLS 279 LA+ + V+ R + +++ S Sbjct: 245 RLAIKKEIRYNLLREVRLQGIDFRRTFHIAYNRHKFRS 282 >UniRef50_C8WUA0 Transcriptional regulator, LysR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WUA0_ALIAD Length = 298 Score = 312 bits (802), Expect = 7e-84, Method: Composition-based stats. Identities = 75/298 (25%), Positives = 129/298 (43%), Gaps = 3/298 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ L+QL+ FV VA+E F RA +R+GL+Q +S +++LE+ GV L DRT R V LT Sbjct: 1 MDTELRQLEYFVAVAEELHFGRAAKRLGLTQPPLSQQIQKLEDEIGVTLFDRTNRRVQLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG+ L ++L + + ++ G++ VA + + +P+ I R+P Sbjct: 61 HAGRVLLEEARKVLAHVQTAVKAARDAAAGRVGRLSVAFVGSATYGWLPEVIRAYQERHP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 D++ VL + ME++ G++D G++ P DL + + + + LA Sbjct: 121 DVELVLREMSTPAQMEALTAGELDVGVLRLPAQHPDLHVRLVERDDCVAVVPSEHPLATR 180 Query: 181 DYVPWQALQGAKLVLQDYA--SGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 + L VL A G G + + E+ T +VAAG+G Sbjct: 181 SSLFLVELAEEPFVLVSRAIWPGLYDGFITLARALGFEPRVRLEVTEVQTAVGLVAAGLG 240 Query: 239 ISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 +SI+P+ + + +L + R+ R S A + L Sbjct: 241 VSIVPSATERVHRRDVRYLHIDGQSPTVELGVAWRR-RDTSPLVAAFLAMAESVRPGL 297 >UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=Bacillales RepID=C6D4H5_PAESJ Length = 303 Score = 312 bits (800), Expect = 1e-83, Method: Composition-based stats. Identities = 77/296 (26%), Positives = 147/296 (49%), Gaps = 5/296 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M + QL +F TVA+ SFS A + + ++Q AV+ V+ LE++ G +LL R+T+ + LT Sbjct: 1 MALNFHQLHIFYTVAERGSFSAAAQSLHMTQPAVTMQVQSLEDYFGTKLLQRSTKRIDLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+ L R ++ + T + +QL G++++ AS TI +++P+ + + +P Sbjct: 61 EAGKALMPYARRSIELIRDTDQAMSAFTKQLKGRLQLGASLTIGEYILPRLLGPFGQTFP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +I + ++E I + FG++ P D+Q EA++S+ L+ +D L+ Sbjct: 121 EISISMKVMNTAQIIEEIINHQLTFGLIEAPVNHPDMQMEAVMSDELKLIVPKDHPLSKR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQA---NIVQEIGHPATLFPMVAAGI 237 V + V+++ SG+R +++ L R I IV E+G + V AG+ Sbjct: 181 QKVLLDEVADYPFVVREQGSGTRLVMEEQLKRKKIDPADLKIVMELGSTGAVKSAVEAGL 240 Query: 238 GISILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 G+S + ++ + G V+ +RQ + K+ L +A +R+ Sbjct: 241 GVSFVSESSVKHEVALGLLHVIPIEDTRFKRQFYSIYLKSTLLPISAVTFLTFLRE 296 >UniRef50_A7ZAT2 Putative HTH-type transcriptional regulator n=2 Tax=Bacteria RepID=A7ZAT2_BACA2 Length = 302 Score = 312 bits (800), Expect = 1e-83, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 129/288 (44%), Gaps = 1/288 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++Q+ F+ VA+ SF++A E + LSQ A+S VK LE V L+DR+ R++ LTDA Sbjct: 1 MDIRQITYFLEVAKSNSFTKASENLHLSQPALSKMVKSLEEELKVELIDRSARQIALTDA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + + + ++ ++ + + GKV++ I P+ I + YPD+ Sbjct: 61 GEIVFEQGQMIMKSIDDLSTNLYDLLHLKKGKVKIGIPPLIGVLFFPKIIRGFKQLYPDV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + V + + G +D G+VI+P +L+E L H L ++ Sbjct: 121 NIKLIEHGGNKVKQEVEDGVLDLGVVIEPVDEEQFDIIPLLNEELMLFVHSAHPLVHKEI 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V Q L+ +L I R G + NIV E + M+ +GISI Sbjct: 181 VEMQDLKNEPFILFSEDFSLHDRIIQECIRAGFRPNIVYESSQWDFISEMIGEELGISIF 240 Query: 243 PALALPLPEGSPL-VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 P + + S + + + P + ++ ++ +K + +S A + Sbjct: 241 PQSIVKKTDQSLVKAISIVNPSIPWKVAIILKKGKYVSHAVREFIRYI 288 >UniRef50_P25544 RuBisCO operon transcriptional regulator n=13 Tax=Proteobacteria RepID=RBCR_CHRVI Length = 302 Score = 312 bits (800), Expect = 1e-83, Method: Composition-based stats. Identities = 74/298 (24%), Positives = 140/298 (46%), Gaps = 3/298 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ SL+QL+VF VA+ S++RA E + LSQ AVS V++LE+ G+ L +R ++VVLT Sbjct: 1 MHVSLRQLRVFEAVARHNSYTRAAEELHLSQPAVSMQVRQLEDEIGLSLFERLGKQVVLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+++ + L + G +R+A + T+ + P+ +A +R+ Sbjct: 61 EAGREVFHYSRAIGQSLREMEEVLESLKGVSRGSLRIAVASTV-NYFAPRLMAIFQQRHS 119 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I L ++ +++ + VD ++ P +++ EA + P ++ D LA E Sbjct: 120 GIGLRLDVTNRESLVQMLDSNSVDLVLMGVPPRNVEVEAEAFMDNPLVVIAPPDHPLAGE 179 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + L V+++ SG+R ++ + G ++ + V +G+G+S Sbjct: 180 RAISLARLAEETFVMREEGSGTRQAMERFFSERGQTIRHGMQMTRNEAVKQAVRSGLGLS 239 Query: 241 ILPALA--LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 ++ L L + + RQ LV R+ + LS AA A + V + + Sbjct: 240 VVSLHTIELELETRRLVTLDVEGFPDRRQWYLVYRRGKRLSPAAGAFREFVLSEAARM 297 >UniRef50_P37499 Uncharacterized HTH-type transcriptional regulator yybE n=4 Tax=Bacillales RepID=YYBE_BACSU Length = 292 Score = 311 bits (798), Expect = 2e-83, Method: Composition-based stats. Identities = 79/293 (26%), Positives = 131/293 (44%), Gaps = 1/293 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +QL+ F T+A+ + ++A + + ++Q A+S S+ LENH GV L DR R + L Sbjct: 1 MEWEQLEYFQTLARMQHVTKAAKSLSITQPALSRSIARLENHLGVPLFDRQGRSISLNQY 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G R++ ++ E + + + G V + T+ L+P I + YP+I Sbjct: 61 GHIFLRRVQAMMKEYTEGKEEIQALLKPDQGVVSLGFLHTLGTTLVPDLIGSFQQEYPNI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 F L W++E ++ GD+D ++ P +Q + SE F+ D LA + Sbjct: 121 SFQLKQNHSYWLLERLKSGDLDLCLLASIKPENPIQWIKLWSEELFVFVPNDHPLASRES 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + G + +L R +D + IQ NI+ E T VAAG+GISIL Sbjct: 181 ITLNEIAGERFILLKKGYALRMTVDELFEKANIQPNIMFEGEEATTAAGFVAAGLGISIL 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 P L L + ++ P +R + + K R LS AE V + Sbjct: 241 PDL-KGLDQSKITKIRVSWPECQRVIGIAWIKGRFLSPVAETFKQYVISHFSE 292 >UniRef50_C9RY94 Transcriptional regulator, LysR family n=8 Tax=Bacillales RepID=C9RY94_GEOSY Length = 304 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 69/302 (22%), Positives = 134/302 (44%), Gaps = 4/302 (1%) Query: 7 QLKV-FVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 QL FV V ++ +F++A E + ++Q AVS ++ LE +LL RT + V L AG+ Sbjct: 3 QLLYVFVKVVEKGNFTKAAEELHMTQPAVSQHIQTLERLFDTKLLYRTNKYVKLNKAGEI 62 Query: 66 LALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFV 125 + + +L + + + SG++ + AS T +++PQ IA+ H+ YP I+ Sbjct: 63 VYHYAKEILGLYTRMNQLLDDLMNRASGELSIGASYTYGEYVLPQMIAKLHQHYPLIKPT 122 Query: 126 LHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPW 185 + ++E +R +D GI+ ++ E + ++ A ++ V Sbjct: 123 ITIGNSNEIVEMVRGHQLDVGIIEMDIEPKNVYIEPFAQDQMVVVASAHHPYAQKETVQM 182 Query: 186 QALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPAL 245 + L+ A ++++ SG+R D ++ + + E G + V AG+G++ L Sbjct: 183 EDLRNATWIVRETGSGTRKATDEFFLKHNFFPSSIMEFGSTQLIKEAVEAGLGLTFLSLW 242 Query: 246 AL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALM-AGREG 302 + L G+ ++ R LV K + A E +VR ++ + R Sbjct: 243 TIKKELSFGTLKIIPINDEPFFRHFSLVTPKTPFYTKAMELFLTIVRTHQPSISHSPRPP 302 Query: 303 DP 304 P Sbjct: 303 SP 304 >UniRef50_Q475G5 Regulatory protein, LysR:LysR, substrate-binding n=9 Tax=Betaproteobacteria RepID=Q475G5_RALEJ Length = 304 Score = 310 bits (796), Expect = 3e-83, Method: Composition-based stats. Identities = 153/301 (50%), Positives = 204/301 (67%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MNY+L+QL+VF+ VA+ FSRA + +GL+QSA+S V ELE GVRLLDRTTREVVLT Sbjct: 1 MNYTLRQLRVFLAVAETGGFSRAADAVGLTQSAISRGVAELEESLGVRLLDRTTREVVLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AGQ LA LERLL +L+ TL DT +G+ G+V +A + TISA L+P +A +YP Sbjct: 61 HAGQALAPALERLLGQLDDTLEDTRELGEHYRGRVVIAGAPTISARLMPMYVAACAAQYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +I+ + D Q +E +R G VDFG++IDP L E ++++PF +C RD LA E Sbjct: 121 EIRLTVRDNVQADGIEQVRAGGVDFGVLIDPLVHDGLTIEPLVTDPFCFVCRRDHPLAQE 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 VPW AL G +LVL D+ASGSRPLID R+GI +VQE+GH A++F MV AGIG S Sbjct: 181 KTVPWSALDGMRLVLLDFASGSRPLIDRVFGRHGIVPRVVQELGHSASVFGMVEAGIGAS 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 +LP +LPLP SPLV + + P ER++++VRR++RSLS AAEA+W +VR+ Sbjct: 241 VLPTYSLPLPAASPLVWRPLVPREERRIVMVRREDRSLSPAAEAVWALVRNLTIKAATRE 300 Query: 301 E 301 Sbjct: 301 P 301 >UniRef50_Q04778 HTH-type transcriptional regulator alsR n=87 Tax=Bacillus RepID=ALSR_BACSU Length = 302 Score = 310 bits (796), Expect = 4e-83, Method: Composition-based stats. Identities = 63/286 (22%), Positives = 120/286 (41%), Gaps = 3/286 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ F+ VA+E F +A R+ ++Q +S +K+LE GV LL RT R V LT A Sbjct: 1 MELRHLQYFIAVAEELHFGKAARRLNMTQPPLSQQIKQLEEEVGVTLLKRTKRFVELTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L ++ + R + G + + + + +P + E +++P + Sbjct: 61 GEIFLNHCRMALMQIGQGIELAQRTARGEQGLLVIGFVGSATYEFLPPIVREYRKKFPSV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L + E + +G++D GI+ P L E S P L + L ++ Sbjct: 121 KIELREISSSRQQEELLKGNIDIGILHPPLQHTALHIETAQSSPCVLALPKQHPLTSKES 180 Query: 183 VPWQALQGAKLVLQDYA--SGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + + L+ ++ + G + NIVQE + +V+AGIG++ Sbjct: 181 ITIEDLRDEPIITVAKEAWPTLYMDFIQFCEQAGFRPNIVQEATEYQMVIGLVSAGIGMT 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALW 286 +P+ A L K + + ++ RK+ + + Sbjct: 241 FVPSSAKKLFNLDVTYRKMDQIQLNAEWVIAYRKDNH-NPLIKHFI 285 >UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepID=A9WGB3_CHLAA Length = 304 Score = 310 bits (795), Expect = 5e-83, Method: Composition-based stats. Identities = 78/299 (26%), Positives = 131/299 (43%), Gaps = 1/299 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ F+ VA+E +RA E++ +SQ A+S +K LE G L DR R + LT A Sbjct: 1 MELRQLRYFLAVAEEGHITRAAEKLYISQPALSQQIKLLEEEIGTVLFDRIGRRIRLTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L R L EL+ + G +R+ QT++A+L+P +A YP I Sbjct: 61 GEILVAHARRALQELSEAQVAIDELNGLQRGMLRIGVVQTVNAYLMPDLVAAFTNAYPAI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + + + + GD+ GI P + E + SE ++ R A Sbjct: 121 SLQIEELATRDIEQRLADGDLQIGIGFVPPETAGVTGEELFSEDLVVVVSRQHPWADLPQ 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 +P Q+L L+L +R L D GIQ + E+ ++ V ++L Sbjct: 181 LPVQSLHQQPLILLSTTFCTRRLWDRCTHIAGIQPRVQIEMNTIGSILAAVRQLTLATVL 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGRE 301 PA+ L + + + + P R + L+ R N A A + R + + +E Sbjct: 241 PAMVLS-GQPDLVGIPLVDPTPRRTVGLLFRHNAYRCAATRAFVAMTRAKLRVWASRQE 298 >UniRef50_A4F7Y9 Transcriptional regulator, LysR family n=3 Tax=Actinobacteria (class) RepID=A4F7Y9_SACEN Length = 333 Score = 309 bits (793), Expect = 9e-83, Method: Composition-based stats. Identities = 68/305 (22%), Positives = 128/305 (41%), Gaps = 4/305 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ FV +A+E+S +RA R+ ++Q +S +++LE G L+ RT R LTDA Sbjct: 1 MELRHLRYFVAIAEEQSLTRAAARLHIAQPPLSAQLRKLETELGAVLVHRTARGTQLTDA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L R+L E++ + T G G++ + + S ++P + + RYP++ Sbjct: 61 GRVLLEEARRILHEVDHAAQMTREAGSGRVGRLSLGFIPSASNVVLPPILRQFKARYPEV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L + ++E + +D G P L ++ + L LA Sbjct: 121 RLRLREMRPDEIVERLHDRRIDAGFFYLPIDDPSLHVRSVADDSLVLALPSTHPLADSPE 180 Query: 183 VPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQ-EIGHPATLFPMVAAGIGI 239 V +A+ G +L G + A R G +VQ ++ T+ +VA G+GI Sbjct: 181 VDLRAVAGEPFILPPRYDMPGLYTSVTQACERAGFTPRVVQPDVWLMQTIVGLVAGGMGI 240 Query: 240 SILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 +++P+ +P V ++ + R+ + + D+ A Sbjct: 241 AVVPSSVQQIPRAGATFVPLTDVSATARMAMAWRREIG-TPVLRSFLDIAAAAPEQPGAA 299 Query: 300 REGDP 304 P Sbjct: 300 GGVRP 304 >UniRef50_B4WMZ4 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WMZ4_9SYNE Length = 289 Score = 308 bits (791), Expect = 1e-82, Method: Composition-based stats. Identities = 68/286 (23%), Positives = 126/286 (44%), Gaps = 3/286 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L+QL F+ VA E F +A +R+ ++Q +S +K+LE+ V+L +RT R+V LT A Sbjct: 1 MNLRQLNYFLAVANELHFGQAAKRLNMAQPPLSMQIKQLESDLDVQLFERTQRKVSLTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L E++L+ + R T + + +G++ +A + ++P I+ + YP + Sbjct: 61 GEVLKKEAEQILERIEVARRKTQQADRGETGQMAIAFVSSAMYSILPPWISAFRQSYPQV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + +D G V P + + + EP + L+ Sbjct: 121 ALTFQEATGLEQISGLLSHQIDIGFVRPPIEDVSISDKVVWREPLVVALPEGHRLSTHKA 180 Query: 183 VPWQALQGAKLVL--QDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + +L+ +L + AS I + + NI Q T+ +VAA +GI+ Sbjct: 181 ISISSLEQEPFILIQRPLASEMYDKIISFCQQASFSPNITQTAQQLQTILGLVAANLGIA 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALW 286 ILP A L I +L+++ RK+ + S E Sbjct: 241 ILPTAAQKLQRAGICYRPFIETTPAVELVMIWRKDET-SRLRENFL 285 >UniRef50_C5BDD2 HTH-type transcriptional regulator AlsR n=2 Tax=Edwardsiella RepID=C5BDD2_EDWI9 Length = 330 Score = 308 bits (791), Expect = 1e-82, Method: Composition-based stats. Identities = 79/304 (25%), Positives = 134/304 (44%), Gaps = 8/304 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M ++ LK F+ VA+E+ F+RA ER+ +SQ +S ++ LE G LL RT R V LT Sbjct: 18 MRIEIRHLKYFIAVAEERHFNRAAERLNISQPPLSQQIQSLERELGACLLMRTNRSVSLT 77 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQC---IAESHR 117 AG ++ +L R + +G + + + ++ IP+ + Sbjct: 78 QAGSLFLKECYSIVGQLEQAAEKAARAHRGETGDLTIGFTSSV--PFIPRVAHSLFSYRH 135 Query: 118 RYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSAL 177 RYP + + + + +E + G +D GI+ + G L+ + EP + HR L Sbjct: 136 RYPQVHLQMRELNTKQQIEPLVDGKLDIGILRNTLLPGVLKHRVLQREPLVAVLHRHHPL 195 Query: 178 AVEDY-VPWQALQGAKLVLQDYASGS--RPLIDAALARNGIQANIVQEIGHPATLFPMVA 234 A + + L V G+ + + L R GI I QE+G T+ +++ Sbjct: 196 AQRGQALRFSDLADQPFVFFSRGDGTALYDELLSLLKRAGIVPYITQEVGEAMTIVGLIS 255 Query: 235 AGIGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 AG+G+SILPA + P ++ L + R LS A AL ++ + Sbjct: 256 AGLGVSILPASYTRIQVDGVCYRALDEPDAYTEVWLAYHRQRPLSAQATALIALLTAPSS 315 Query: 295 ALMA 298 L+A Sbjct: 316 NLIA 319 >UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y467_9FIRM Length = 309 Score = 308 bits (791), Expect = 1e-82, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 142/294 (48%), Gaps = 4/294 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L+ L++FV V + S ++A E + LSQ AVS ++++LE++ G+ L DR ++++ LT++ Sbjct: 1 MTLRHLRIFVEVCRTGSITKAAESLHLSQPAVSLAIRQLEDYYGILLFDRISKKLYLTES 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G ++ +++ + +G +R+ +S + ++PQ + + R+P I Sbjct: 61 GNKMLSYASHIIESFDDMETQLKNWDS--AGTLRIGSSISTGTQMLPQLVRRFNLRFPQI 118 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + + + + +D +V D+ C ++ ++ L Sbjct: 119 RTQVLIDNSRIIEDKVLTNQLDLALVESLSYSPDIVCVPFYTDRLIVITAPKHPLTQNPE 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 +AL ++L++ SG+R ++DA L +Q + E ++ V IGISIL Sbjct: 179 CTVKALADYPVLLREPGSGTREVVDALLVTAEVQITPLWESTSTRSIINAVKENIGISIL 238 Query: 243 PALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 P + + G+ + +P+ R ++ +N+ L+ +A+A +V ++ N Sbjct: 239 PYELVKNEIQSGAVAGLPLASPLPNRTCSIIHHRNKYLTPSAQAFIEVCQEYSN 292 >UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Bacillales RepID=C6J455_9BACL Length = 307 Score = 308 bits (791), Expect = 1e-82, Method: Composition-based stats. Identities = 76/295 (25%), Positives = 132/295 (44%), Gaps = 7/295 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL + +A+EK+FSRA +++ ++Q ++S + +LE GV+L R T V LT A Sbjct: 1 MELRQLLYTLKIAEEKNFSRAADKLHIAQPSLSQQLSKLEQELGVKLFQRNTSTVELTYA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G ++++D + ++ + Q +G+V V + +HL+P + YP+I Sbjct: 61 GASFIAHAQKIMDAVAQLRQEMDDISQLRAGRVVVGSMPITGSHLLPYVLPAFKASYPNI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV--- 179 Q L + + + +G D ++ P L E I E L D L Sbjct: 121 QVTLLEDTSLNLEKLTAEGGTDLSLLSLPLLEPTLSYEPIGEEIIDLAVPPDHPLTKTPG 180 Query: 180 --EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGI 237 E V + L+ ++ G R + G + N+V E + T+ +VAAG+ Sbjct: 181 VLEQGVEMKQLENEPFIVLKKGQGFRKMTADLCREAGFEPNVVFESNNIETVQSLVAAGM 240 Query: 238 GISILPALALPLPEGSPL--VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 GI+++P + + P R L++ RK R LS AAEA + + Sbjct: 241 GITLVPRFIARAKRSELIPAYLPLAAPAPSRTLVIAYRKGRYLSKAAEAFIETFK 295 >UniRef50_P77559 Uncharacterized HTH-type transcriptional regulator ynfL n=179 Tax=Gammaproteobacteria RepID=YNFL_ECOLI Length = 297 Score = 307 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 78/297 (26%), Positives = 130/297 (43%), Gaps = 3/297 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN L+ L+ FV VA+E F RA R+ +SQ +S ++ LE G RLL RT R V+LT Sbjct: 1 MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNRSVLLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISA-HLIPQCIAESHRRY 119 AG+Q ++L ++ R+ Q +G++R+ + + + ++ R Y Sbjct: 61 AAGKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSSAPFIRAVSDTLSLFRRDY 120 Query: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 PD+ + + + + +G +D G++ + L+ I+ EP + D LA Sbjct: 121 PDVHLQTREMNTREQIAPLIEGTLDMGLLRNTALPESLEHAVIVHEPLMAMIPHDHPLAN 180 Query: 180 EDYVPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGI 237 V L V D +G I + R + I QE+G T+ +V+AG+ Sbjct: 181 NPNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHLTPVITQEVGEAMTIIGLVSAGL 240 Query: 238 GISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 G+SILPA + V ++ LV K+ S AA + + Sbjct: 241 GVSILPASFKRVQLNEMRWVPIAEEDAVSEMWLVWPKHHEQSPAARNFRIHLLNALR 297 >UniRef50_B8K739 Transcriptional regulator, substrate-binding of LysR family protein n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8K739_VIBPA Length = 297 Score = 307 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 64/289 (22%), Positives = 133/289 (46%), Gaps = 4/289 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 LK+L F +A+ +F++A +++G++QSA+S S+K+LE G++L++RT R++ LT Sbjct: 1 MDLKRLHYFNQLAKTGNFTKAADQLGIAQSALSTSIKKLEQQLGLKLVNRTERQMSLTAE 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ L + +L+++ ++ + SG ++ A ++++ +P + + + YP I Sbjct: 61 GQVLLRHAKIILEDVEQAEKELQELKGLTSGVIKFGAPAMLASYFLPDALEQFKKAYPGI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 Q +H+ + + + G++D ++ ++ + + A Sbjct: 121 QINIHEAGTATLAQMLVNGELDLALIRGDREHEQIRQSLLAQDQIAACVPISHPFAKRSA 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI-SI 241 + LVL R +++ +N + + E P L MV +GI + Sbjct: 181 ITLDEFCQQPLVLFKNGYFLRETVNSYCQQNKLTPQVHFETNLPELLKSMVRRQVGIGTC 240 Query: 242 LPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 LP L + + P + QL + + + LSTAA+A D ++ Sbjct: 241 LPILVAD--DPELKAIPF-DPPIPLQLGIGWKSSHYLSTAAKAFVDFLQ 286 >UniRef50_C1M4D9 Putative uncharacterized protein n=2 Tax=Citrobacter RepID=C1M4D9_9ENTR Length = 302 Score = 307 bits (787), Expect = 4e-82, Method: Composition-based stats. Identities = 80/300 (26%), Positives = 136/300 (45%), Gaps = 5/300 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN L+ L+ FV VA+E F RA R+ +SQ +S ++ LE G RLL RT R V LT Sbjct: 1 MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQILEQQVGARLLARTNRSVALT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHL--IPQCIAESHRR 118 AG+Q ++L +N R+ +G++R+ + + + + + ++ + Sbjct: 61 SAGKQFLADSRQILGLVNEAAARAERLHLGEAGELRIGFTSS-APFIKAVSDTLSLFRQS 119 Query: 119 YPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALA 178 YP + + + + + +G +D G++ + L+ E IL EP + R LA Sbjct: 120 YPAVHMQTREMNTREQIAPLNEGTLDLGLLRNTQLPETLEREIILHEPLMAMIPRAHPLA 179 Query: 179 VEDYVPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAG 236 + V L V D +G I + R G++ I QE+G T+ +VAAG Sbjct: 180 QKPVVTLAELANEPFVFFDPHVGTGLYDDILGLMRRYGLKPTIAQEVGEAMTIIGLVAAG 239 Query: 237 IGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 +G+SILPA + + ++ LV K+ S AA+ + + A+ Sbjct: 240 LGVSILPASFKRVQLYEMCWIPIAEEDAVSEMWLVWPKHHEQSHAAQRFREQLLAAVQAI 299 >UniRef50_P0ACQ6 Hydrogen peroxide-inducible genes activator n=273 Tax=cellular organisms RepID=OXYR_ECO57 Length = 305 Score = 307 bits (787), Expect = 4e-82, Method: Composition-based stats. Identities = 76/292 (26%), Positives = 132/292 (45%), Gaps = 2/292 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +++ L+ V +A+ + F RA + +SQ +S +++LE+ GV LL+RT+R+V+ T A Sbjct: 1 MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L + +L E+ + G+ +SG + + T+ +L+P I H+ +P + Sbjct: 61 GMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKL 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + LH+ ++ + G +D I+ + EP L + D A + Sbjct: 121 EMYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPLFDEPMLLAIYEDHPWANREC 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 VP L G KL++ + R G + TL MVAAG GI++L Sbjct: 181 VPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLL 240 Query: 243 PALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 PALA+ + + I P R + LV R L + E L + +R + Sbjct: 241 PALAVPPERKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRAR 292 >UniRef50_A4G228 Transcriptional regulatory protein, LysR family n=18 Tax=Betaproteobacteria RepID=A4G228_HERAR Length = 367 Score = 306 bits (786), Expect = 6e-82, Method: Composition-based stats. Identities = 79/300 (26%), Positives = 134/300 (44%), Gaps = 3/300 (1%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N +L+QLKVF TVA+ SFSRA E + L+Q AVS VK+LE+H G+ L ++ +++ LT Sbjct: 47 NATLRQLKVFETVARLLSFSRAAEELHLTQPAVSTQVKKLEDHAGLALFEQLGKKIYLTP 106 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 G +L ++ + + GK+ VA + + P+ + E R + Sbjct: 107 GGTELLHYSRTIIQQFQEAEDAMTQFKGITGGKLNVAVI-SAGDYFFPRLLVEFARSHQG 165 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + L ++ ++ + D I++ P D E P+ ++ D L + Sbjct: 166 VTLNLSVHNREGLLNQLANNLTDLAIMVRPPTDMDTINEPFAPHPYVIVAAPDHHLVSKK 225 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 +P L V+++ S + ++ NI EI T+ V AG+GIS Sbjct: 226 NIPMSTLIHEPFVVREKGSDTWHSMEDGFGSRIDDLNIAMEIKSTETIKQAVIAGMGISF 285 Query: 242 LPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 L A + L GS V+ V +V RKN+ L A+A + + ++G L+ Sbjct: 286 LSAHTISMELQAGSLTVLDVEGFPVMLNWYVVHRKNKRLPPVAQAFRNFLLNEGPELIER 345 >UniRef50_A5D2L1 Transcriptional regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D2L1_PELTS Length = 303 Score = 306 bits (786), Expect = 6e-82, Method: Composition-based stats. Identities = 75/295 (25%), Positives = 131/295 (44%), Gaps = 5/295 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +LKQL+ F+ VA+ +SF++A ++ +SQ AVS +K LE V L R ++V+LT+A Sbjct: 1 MNLKQLEAFLLVAELQSFTKAARQLYMSQPAVSFQIKALEEDLQVALFQRGDKKVILTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L +++L + G + V AS +L+P I + +YP I Sbjct: 61 GRLLYPEAKQMLKHYQKIKVGLDDLRDLKKGHLVVGASTIPGEYLLPLLIGKFKEKYPGI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L V + +R+ ++D GI L+C + + L+ + A Sbjct: 121 KITLKVSGSGQVGQWVREREIDLGITGAFIEGESLECRPWIDDQLVLIVNPSHRWASLGA 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQAN---IVQEIGHPATLFPMVAAGIGI 239 V L+ ++++++ SG+R I+ L + E+G + V AG+G+ Sbjct: 181 VQASELKNEPMIMREHDSGTRRTIEKKLKECNLSLEKIPQGMELGSTRAVITAVEAGLGV 240 Query: 240 SILPALALP--LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 SI+ A L G V+ + R L VR K A A + + D+ Sbjct: 241 SIVSRYAAREALELGRVKEVQVTGLNMNRSLYQVRHKQGIEGFAIRAFTEFINDR 295 >UniRef50_B8FPA0 Transcriptional regulator, LysR family n=4 Tax=Clostridiales RepID=B8FPA0_DESHD Length = 295 Score = 306 bits (786), Expect = 6e-82, Method: Composition-based stats. Identities = 69/288 (23%), Positives = 127/288 (44%), Gaps = 1/288 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +K L+ FV VA++KSFS+A E+ ++QS +S +K+LE G L +RT++ V LTD Sbjct: 1 MEIKHLEYFVEVARQKSFSKAAEKCHVTQSTISKLIKDLEGELGTSLFNRTSKYVQLTDT 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G + ++ + + + + GK+ + L + + E ++YP I Sbjct: 61 GAIFLDQALEIVTKFENLTHEFQNRIKLERGKIAIGLLPITGTTLFAELLGEFKKKYPQI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L +R + V+ I G +D G+V + A +P +++ + ++ Sbjct: 121 EISLSERGSKKVIMDILDGTLDVGVVCSVPDSQYFESFAFAEDPLYVIVSVRNPISKLAS 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + ++L VL I + G NI+ E + MVAA +GI+ L Sbjct: 181 IDLKSLADEPFVLYSSEFSLHDEIISKCKNEGFAPNIIFETSQFELMTQMVAADLGIAFL 240 Query: 243 PALALPLPEGSP-LVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 P A + V+ P + Q+ ++ ++ RS+S AA Sbjct: 241 PGAACREMDPRRFAVIPVTNPQIIHQMFIIWKRGRSMSHAANLWLQFA 288 >UniRef50_B5YJV7 Transcriptional regulator n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJV7_THEYD Length = 302 Score = 306 bits (785), Expect = 6e-82, Method: Composition-based stats. Identities = 73/295 (24%), Positives = 142/295 (48%), Gaps = 5/295 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +LKVF TVA+ KSFS+ E I L+Q AVS ++ LE +L DR++ + LT A Sbjct: 1 MEDHKLKVFCTVAETKSFSKTSEIIHLTQPAVSLQIQALEELYETKLFDRSSGSITLTPA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L +++L ++ ++ + G V++ A T+ +++P + +R+P I Sbjct: 61 GEILYKYAKQILTMYAEAAKEISKITGLIKGCVKIGAGTTVGNYILPAVAVDFKKRHPKI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + ++E + +DFGI+ + ++I+S+ ++C D L + Sbjct: 121 RVSVSIGNAKKILEMLNSSMIDFGIISEMPGKSKFIVDSIISDELCVICSADHPLNNQKS 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQ---ANIVQEIGHPATLFPMVAAGIGI 239 V + V+++ S +R +I+ LA +G+ +I +G ++ V GIG+ Sbjct: 181 VSLYDVVKEPFVIREEGSSTRVIIEKFLAEHGLSVSDLHISLILGSTGSIKEAVERGIGL 240 Query: 240 SILPALALPLPE--GSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 SI+ A+ G+ ++K + R ++ KN LS A E +++ Sbjct: 241 SIVSKWAIRKEVSCGNLRILKLKEGKITRDFYIILPKNTILSPAVEEFITYLKNY 295 >UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46MA3_RALEJ Length = 296 Score = 306 bits (785), Expect = 6e-82, Method: Composition-based stats. Identities = 68/290 (23%), Positives = 128/290 (44%), Gaps = 3/290 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ F+ +A+E +F+RA ER+ ++Q +S +++LE V LL+RT R V LT+A Sbjct: 5 MDLRHLRYFIAIAEELNFTRAAERLHIAQPPLSMQIRQLEEEMDVTLLNRTRRHVELTEA 64 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + ++L + R + +G++ V + S L+P + R+P + Sbjct: 65 GRIFLEQARQILRATERAVVQAQRAHRGETGRLTVGFFEHTSYTLLPPILRAYRERFPSV 124 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + +L P E++R+GD D + + ++ E IL EPF L LA + Sbjct: 125 EILLRWFPVVKQAEALRRGDADISFMRPVPDLEEVTWETILEEPFVLAVPARHPLANAES 184 Query: 183 VPWQALQGAKLVLQ--DYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + + V+ + A + A G ++ E+G TL +V++G GI Sbjct: 185 ISLKKCAQEPFVMYIPEMAPDFHAMNMRMCASAGFVPKVISEVGQVYTLLGLVSSGAGIG 244 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 +PA + + ++ML R+ + A + + Sbjct: 245 FVPASVRKVKFDHVVYKPIEGRQPTIEIMLGY-SQRTPTPLMTAFIETAK 293 >UniRef50_Q1IHL3 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IHL3_ACIBL Length = 306 Score = 306 bits (785), Expect = 8e-82, Method: Composition-based stats. Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 3/291 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ FV VA+E F RA R+ L+Q +S +K+LE G L RT+R V LT A Sbjct: 5 IELRHLRYFVAVAEELHFGRAAARLHLAQPPLSQQIKKLEEILGYALFTRTSRAVKLTSA 64 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ R +R L + + + +G+ G +RV + ++P R YP + Sbjct: 65 GEVFLERAQRTLRHVREDMEEVRSIGRGEVGYLRVGFIGSSMLTVLPAIFGRYRRAYPKV 124 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + V+E + + +D GI+ D GP L E + SEPF + LA + Sbjct: 125 NLQLQESYTSGVVEGLLKATLDAGILRDGGPTHGLTVERLYSEPFVAVLPGKHPLAKQRA 184 Query: 183 VPWQALQGAKLVLQDYASG--SRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + +AL+ V S + + +G + +VQE T+ +V AG+G+S Sbjct: 185 LSPRALKDEPFVFYPPYSSKLAYEKPVSICEAHGFRPKVVQEAPQWLTILRLVGAGLGVS 244 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 I PA + + + V + L R+ A ++VRD Sbjct: 245 IAPACVERIAAPDVVCIPLRGAAVRSDIELAFREGEGR-EIVRAFAEIVRD 294 >UniRef50_C0ZI27 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI27_BREBN Length = 307 Score = 306 bits (784), Expect = 9e-82, Method: Composition-based stats. Identities = 77/304 (25%), Positives = 135/304 (44%), Gaps = 3/304 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ F+ + +E FSRA E++ SQS +S +K LEN GV L DR + + LT+A Sbjct: 1 MELRQLEYFMAICEEMHFSRASEKLCTSQSNLSQQIKFLENELGVPLFDRLGKRITLTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L + + ++ M G + + + L + E HR YP Sbjct: 61 GKVLLEQSRHVFSHIDYAREAIAAMKNNEGGTLTIGVLPGDADLLFDALLVEFHRLYPKT 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + ++E I G++D G+ + P P + + E F L HR LA E Sbjct: 121 SLSVIE--STRIVEQITSGEIDLGVTVLPEPDERITVIPLFHEEFALAVHRAHPLAKEKA 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + LQ K+V+ +R LI+ + G + E + +V GIG IL Sbjct: 179 IKFGQLQEVKMVMFPPDHQARQLINRYCIQEGFRLQPHIETTTLQSQLSLVKKGIGGCIL 238 Query: 243 PALALP-LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGRE 301 P+L L + + ++ + P + + LV RK++ + AA D ++ + + + Sbjct: 239 PSLLLQNVNDDEIAIINLLHPTPSQDICLVYRKDKYMGFAARTFIDTLQAYIQSAIDNAQ 298 Query: 302 GDPL 305 + Sbjct: 299 ASAI 302 >UniRef50_B0N992 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B0N992_EUBSP Length = 335 Score = 305 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 61/303 (20%), Positives = 139/303 (45%), Gaps = 5/303 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L+ L +FV+V + S ++A + + ++Q +VS +KELE + G++L DR R + T+A Sbjct: 1 MTLRHLNIFVSVYEYNSITKAADALHIAQPSVSLVIKELEEYYGIQLFDRIGRGITPTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G++L ++ N + G +R+ AS TI H++P I E + +P + Sbjct: 61 GKELYSYAIHIVSLFNEMAQRIKNWDNV--GTLRIGASITIGTHILPGLIKEYQKDFPYL 118 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + + I +D G++ + ++ + + + + + L+ + Y Sbjct: 119 RIKVTVNKSATIEQHILDNKIDIGLIENQPDHPEILSQPFMKDNLCAIVPNEDPLSSKAY 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + L ++++ S R ++DA + I N + E + V+ +G+++L Sbjct: 179 ITLEELASRPFLMREKGSAGREILDACFSLKNIHVNPLWESSSTQAIVKGVSMNLGVAVL 238 Query: 243 PALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 P L + + E + + TP + R L ++ K++ L+ + + + G + + Sbjct: 239 PYLLIKRDIEEHNVNYLPFKTP-LTRNLNIIYHKSKYLTRNMLSFIGLCKKVGRSHLVCI 297 Query: 301 EGD 303 Sbjct: 298 PSS 300 >UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I3E5_THIIN Length = 301 Score = 305 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 69/301 (22%), Positives = 124/301 (41%), Gaps = 5/301 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ FVT+A++ SFSRA ER+ +SQ +S +K LE+ G RLL+R+ R V LT A Sbjct: 1 MELRQLRYFVTIAEQGSFSRAAERLHISQPPLSTQIKALEDEIGARLLERSNRGVTLTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G + +L +L + + + +G + + ++P + RYP + Sbjct: 61 GAAFFEDIRSVLAQLEHAVERVRQAERGDAGTLSIGFVSIADFGILPPTLKSFRARYPQV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 LH+ + +R ++D I + P L +L EP L + E Sbjct: 121 DVQLHELTTDAQIRELRAAELDLSIGLAPVDEPGLTFTPLLQEPLMLAAPTTHPVLQEGS 180 Query: 183 --VPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 V +AL ++ G L + G I Q T+ +V+ G+G Sbjct: 181 GAVDLRALAKEPFIVPPRNIGPGLYDLTLSLCQAAGFAPRITQHARQMQTVIGLVSCGMG 240 Query: 239 ISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 ++++PA L + +L +++ S + + +R+ L+ Sbjct: 241 VALVPASLRQLKRPGVQYRPLLGQPATIELGILQLSQTS-NPLRDNFNQALREAALHLLT 299 Query: 299 G 299 Sbjct: 300 R 300 >UniRef50_A3I8L6 Transcriptional regulator, LysR family protein n=1 Tax=Bacillus sp. B14905 RepID=A3I8L6_9BACI Length = 292 Score = 305 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 134/294 (45%), Gaps = 3/294 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++ L F+ V +E F++A E++G+SQ +S ++ LE+ G+ L DR +++V+T+A Sbjct: 1 MEIRHLHYFMAVCEELHFTKAAEKLGISQPTLSQQIRVLEDELGMPLFDRIGKKIVVTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L +L+ L + + + G++RV + + I Q + + H+++P + Sbjct: 61 GALLFTYATAMLNTLQNVKGAIKDLQEVQGGQIRVGIMPSDLDYRITQLVIDFHQKFPRV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + +M + + +VD GI + P L + E + + ++ A + Sbjct: 121 KLTI--LASIDIMRQVLENEVDIGIGTNVEPHDRLVIIPLRKEEYVVTVSKEHPWAHREA 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V L+ LV+ R +++ + ++G Q + + E ++ +V A IG ++ Sbjct: 179 VTIAELKDLPLVMYPEGFLGREIVEETVKKHGFQLHTILETSSVTSIMNLVRANIGATVQ 238 Query: 243 PALALPLPEG-SPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 P + +++ + R L ++ R +R +S A A + ++ Sbjct: 239 PYPLIQQMNDSDLRIIRLTDTIPSRSLSIIYRVDRYVSHATTAFIEQIKAYLKE 292 >UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KMT5_9GAMM Length = 300 Score = 305 bits (782), Expect = 1e-81, Method: Composition-based stats. Identities = 85/295 (28%), Positives = 149/295 (50%), Gaps = 1/295 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M + Q+ F VA+ SF+ A R+ LSQ A+S ++K LE G +L RTTR V LT Sbjct: 1 MAVPINQVMAFSAVARTGSFAEAALRLHLSQPALSIAIKNLEEALGGKLFARTTRSVTLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ RLL + +L+D GK+ +AA T + +L+P+ +A HR+YP Sbjct: 61 PEGKAFYPVARRLLSDWEQSLQDVRNHFSLRRGKLDIAAMPTYTINLLPKILASFHRQYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +I +HD + V+E +R+ + G+ DP DL + + + F + + L + Sbjct: 121 NINVTVHDVIAESVVEMVREHRCELGVTFDPDDSPDLTFQPLFIDRFIAIFPKQHPLLGK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W+ L + +G+R ID LA+ G++ E ++ MV G+G+S Sbjct: 181 GSLRWRDLLDYPHISLQKPAGTRARIDQTLAKKGLRITPAFESHQLVSIGRMVREGLGLS 240 Query: 241 ILPALALPLPEGSPLVVK-RITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 ++P+ + + L + PV+ QL ++ R+ ++LS AA+A+ ++R+ Sbjct: 241 VVPSTSRAQMKEMGLECRAIAFPVITHQLGVITRRQQTLSVAAQAMASLIREMSP 295 >UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=Actinomycetales RepID=C7PVI0_CATAD Length = 297 Score = 305 bits (782), Expect = 1e-81, Method: Composition-based stats. Identities = 72/296 (24%), Positives = 136/296 (45%), Gaps = 3/296 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 QL+ F+ VA+ + F+RA E + ++Q ++S ++ LE+ G L R + LTDA Sbjct: 1 MQFHQLRYFIAVAETRHFTRAAEALHVTQPSLSQQIRALEHELGADLFLRARGNITLTDA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L R+L + ++ R+ + + G VR+ A+ ++ L+P + HRRYP I Sbjct: 61 GEALLPMARRILADADAARREVQELAELRRGHVRLGATPSLCTGLLPDVLRTYHRRYPGI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGD--LQCEAILSEPFFLLCHRDSALAV- 179 Q ++ + ++ + +G +D +V+ P P L E +L E ++ + Sbjct: 121 QLLVQESGSHDLVRDLARGALDLALVVLPLPSPSPALTTEELLREDLVVVSAPNLPPPGD 180 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 V L+ +L++ + R L AA G + E G + AG+G+ Sbjct: 181 GRQVRIADLEHEQLIMFRHGYDLRDLTVAACRAQGFEPVFAIEGGEMDAVLGFARAGLGV 240 Query: 240 SILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 +I+P++ + S V P + R + L R + +L AA+ + ++ A Sbjct: 241 AIVPSMVAQNVDPSLRVTPIAPPALHRTIALAHRTDVALPRAAQEFRRTLLERTTA 296 >UniRef50_P52696 Uncharacterized HTH-type transcriptional regulator ybhD n=68 Tax=Proteobacteria RepID=YBHD_ECOLI Length = 317 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 94/290 (32%), Positives = 158/290 (54%), Gaps = 1/290 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M + L +K FV +A+ SF+ A + + ++Q A++ +K++E V+L +RTTR+V LT Sbjct: 1 MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHVQLFERTTRKVTLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG++L L+ + + TL + M G V +A T + +P I + + YP Sbjct: 61 KAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +I+ + ++ MES+ + DFGI ++ + +++EPF L C RD LA + Sbjct: 121 NIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAKK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V WQ L G K++ +SG+R LI+ LA + + E+ H +T +V AG+GIS Sbjct: 181 QLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGIS 240 Query: 241 ILPALALPLPE-GSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 LP LA+P S + + + PV+ R L ++RRK+ LS AAE + ++ Sbjct: 241 ALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFALL 290 >UniRef50_B5JN19 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JN19_9BACT Length = 296 Score = 304 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 76/287 (26%), Positives = 134/287 (46%), Gaps = 4/287 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+Q++ F VA E+ F RA E++ ++Q A+S V++LE G +L +R R V LTDA Sbjct: 1 MELRQIRSFRVVAAEEHFRRAAEKLNIAQPALSLQVRQLEEELGTQLFERVGRGVRLTDA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G +R++ ++ + T + G++R+ +QT + P I+ RRYP + Sbjct: 61 GSLFWDYADRIVSLVDESAEATREHSDLIRGRLRIGIAQTPNCCFGPAVISAFKRRYPQV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + + S+ +G++D GI P +L E+I E F L R + Sbjct: 121 FVSLAELAADEIESSLLKGELDLGIGFGPCDSPNLSSESIYEERFVALAPRGHPWFNKKN 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAA-GIGISI 241 + + L +L+L +R + + + + E+ + + + G+ S+ Sbjct: 181 ISLKTLAQEELILLTRDYCTRRIFEKTCDDLDVSLKVAIEMNTIEGIIASLESTGL-ASV 239 Query: 242 LPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALW 286 LPA + PL + V P + R++ LV RK+ LS AA A+ Sbjct: 240 LPAQIVNSPLMSPTLRSVPIAQPGIRRKVALVYRKSGYLSPAAHAMA 286 >UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae RepID=A9WIA6_CHLAA Length = 307 Score = 304 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 84/286 (29%), Positives = 137/286 (47%), Gaps = 3/286 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L L+++V V ++ SF++A E + +SQSAVS +V+ELE G LL+R R V T A Sbjct: 17 LNLHLLRIYVAVLEQGSFTKAAEVLTMSQSAVSRAVQELERQLGTTLLERRARGVAPTMA 76 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L R+ + + G++ + AS TI +L+P + HRRYP I Sbjct: 77 GTILGEHARRIFTHERLAIEALNELRGLQRGRLAIGASSTIGIYLLPPLLGNYHRRYPGI 136 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPG-PVGDLQCEAILSEPFFLLCHRDSALAVED 181 + L Q ++E + +D V P DLQ S+ ++ D L Sbjct: 137 ELFLDIGNTQQIIERLLSYQIDVAYVEGPVAANEDLQVVPWRSDEMVVIASPDHPLTRRV 196 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + LQ A ++++ SG+R +++ ALA + + V E+G + V+AG+G+S+ Sbjct: 197 TLDCSDLQDAPFIMREPGSGTRKVMEQALAAHNVTVRPVMELGSTEAVKQAVSAGLGLSM 256 Query: 242 LPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEAL 285 + + L G V+ ++RQL VR +R S A EA Sbjct: 257 VSRFTIQSELIAGKLRVLNIPGLNIQRQLSRVRLHDRPQSLALEAW 302 >UniRef50_Q1AVR3 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVR3_RUBXD Length = 305 Score = 304 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 78/304 (25%), Positives = 127/304 (41%), Gaps = 3/304 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ FV VA+E+SF A R+ +SQ +S +K LE GVRL DR TR V+LTD+ Sbjct: 1 MELRQLRYFVAVAEEQSFGGAARRLRISQPPLSLQIKALERELGVRLFDRNTRRVMLTDS 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ R +L+E+ + L GK+ V + + L+P I R+ + Sbjct: 61 GRAFLERARVILEEVERAKETAKGAERGLLGKLEVGFVSSATLSLLPPAIRLFRERFGGV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L + ++++ G+ G+V P + E + E + L D Sbjct: 121 ELELRELTSAQQIDALYNGETRVGLVRLPLRAPGIHLEPVFEERLVVALPSGHPLEALDR 180 Query: 183 VPWQALQGAKLVLQDYA--SGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V +A+ L+ G I R G N+ Q H T+ +VA+G+GIS Sbjct: 181 VSLEAIADLPLIFFTRQLIPGLHAQIIELFQRVGAFPNVAQHAVHLQTIVGLVASGVGIS 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 ILP+ A+ + + + L L + S E +VR+ + Sbjct: 241 ILPSSAMRVRREGIVYLPLDEDDATSWLGLAWVEGDD-SVLVENFVSIVREVAQSEAPRE 299 Query: 301 EGDP 304 Sbjct: 300 FSQA 303 >UniRef50_Q3M2K4 Transcriptional regulator, LysR family n=5 Tax=Cyanobacteria RepID=Q3M2K4_ANAVT Length = 298 Score = 304 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 63/298 (21%), Positives = 125/298 (41%), Gaps = 4/298 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDR-TTREVVLTD 61 L+ L+ F+ VA+E FS+A ER+ ++Q +S +++LE GV L R T R+V LT+ Sbjct: 1 MELRHLRYFIAVAEELHFSKAAERLHIAQPPLSQQIQQLEAELGVELFQRKTKRQVQLTE 60 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 AGQ +L +L+ + T R G+ G++RV + ++ L+P + + ++ + Sbjct: 61 AGQVFLQEAYQLFAQLSKAIDLTQRTGRGEKGQLRVGFTSLVTYDLLPVILRQFREQFLE 120 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 ++ VL + +++ + G P E I E + LA ++ Sbjct: 121 VELVLQELTTTQQEQALFDRRIHVGFAHPPLEDNTFNQECIHQEGLIVAMLVTHFLARQE 180 Query: 182 YVPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 + + L+ ++ G I + + + E T+ +V+ G+GI Sbjct: 181 NISVRELKDENFIMFPRYLGPGLYDQILSLCQQGNFSPKVTIEAIQMQTIIGLVSGGMGI 240 Query: 240 SILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALM 297 +I+P+ L + + +V R ++ +VR L+ Sbjct: 241 AIVPSSLQNLQRAGVVYRTLDEKTPLVETAVVWR-QEDMTPVLREFLQIVRSVCVELI 297 >UniRef50_A6VV39 Transcriptional regulator, LysR family n=6 Tax=Gammaproteobacteria RepID=A6VV39_MARMS Length = 295 Score = 304 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 134/292 (45%), Gaps = 2/292 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +K L+ F+ +A+ +SF++A +++G++Q AVS ++K+LE G+ L+ R R + LTD Sbjct: 1 MDIKPLRYFIAIAKTESFTKAAQQLGVAQPAVSMAIKKLEADLGLTLIHRADRNIGLTDE 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G++L + E+++ + L + + G+VRV + ++ P + +YP I Sbjct: 61 GKKLLIHAEKIIQATDDALLEMSELKGLSQGEVRVGIPSMLGSYYFPPILMAFRHKYPTI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + + + G++D +++ L+ +A++ E + D + + Sbjct: 121 TLKVIEGGTWQLQKMLENGELDLSVIVAETLPDGLETQALIREEMLVTIATDHPFSQLEK 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + +A +LV+ R ++D I E + + G GIS L Sbjct: 181 ISPEAFFDEELVMFKEGYFHRRIVDKLAKACKKTPKIGFETNLIPLIKSITQQGFGISTL 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 LA+ + E L+ + P + L + RK+ LS A A + V + G Sbjct: 241 --LAMVIEEDDDLITRSFDPPIWLDLGIAWRKDSYLSKANRAFLEFVNEHGR 290 >UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=Rhodobacter sphaeroides KD131 RepID=B9KVK0_RHOSK Length = 321 Score = 304 bits (779), Expect = 4e-81, Method: Composition-based stats. Identities = 102/308 (33%), Positives = 162/308 (52%), Gaps = 2/308 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN L+ L+ FV A+ +SF A + I LSQ A++ +++LE GV LL+RTTR V LT Sbjct: 14 MNIDLEDLRAFVATAEMQSFRAAADSIHLSQPALTRRIQKLEATLGVSLLERTTRRVSLT 73 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ R R+LD+L ++L + ++ SG V +A T + + +P I+ +P Sbjct: 74 AVGRDFLPRARRILDDLETSLLSVREIAERRSGLVSIACIPTAAYYFLPDVISAFTEEFP 133 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+F + D V++SI + DFGI + D+ + ++ EPF L C RD LA + Sbjct: 134 AIRFRIFDAGANEVLQSILNREADFGITLLGADDPDVTFDPLIEEPFLLACRRDHPLARQ 193 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + V W L + V SG+R ++D ALAR ++ E+ H +T +V AG+G++ Sbjct: 194 ESVTWADLAAHRFVTVGRTSGNRLIMDLALARANVRPRSFFEVQHLSTSLGLVEAGLGVA 253 Query: 241 ILPALALPL-PEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 LP +ALP P S + + I P V R + +VR + AAE + ++ + AG Sbjct: 254 ALPRMALPAGPHPSIVTLPLIEPRVTRTVGVVRVPGARRAPAAEQFYQMLLSRWRDN-AG 312 Query: 300 REGDPLYQ 307 PL + Sbjct: 313 PAAPPLSR 320 >UniRef50_B8D275 Transcriptional regulator, LysR family n=11 Tax=Clostridia RepID=B8D275_HALOH Length = 296 Score = 304 bits (779), Expect = 4e-81, Method: Composition-based stats. Identities = 67/289 (23%), Positives = 141/289 (48%), Gaps = 2/289 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L+QLK+FV V + K+ S+A +++ +SQ A+S ++ ELE ++L DR + + LT A Sbjct: 1 MNLRQLKIFVMVCKTKNMSKAAKKLYMSQPAISQTISELEEDLNIKLFDRIKKRLKLTYA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L +R+L+ ++ T + GK+R+ AS TI +L+PQ I +Y I Sbjct: 61 GKILLRNSKRILNLVDETENIIKDIVNMNQGKLRIGASMTIGTYLLPQIIEGFLNKYNKI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + I +D +V P D+ E + +L+C + + + Sbjct: 121 HLPFTIDNTKVIEDMILDNKLDLALVEGPIYCKDILVEHFFDDQLYLMCSSKHSWSHKRK 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + L+G ++++ SG+R I+ + ++ I+ ++ + + + + +G+SIL Sbjct: 181 INSEELKGEDFIIREKGSGTRETIENIMRKHSIKYHVTHVFNNIEAIKRAIISNLGVSIL 240 Query: 243 PALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 P + + L +G + V +R+ ++ K++ S + + Sbjct: 241 PEICVKEELKKGLLVKVDIQGIEFKRKFSIIYHKDKYRSQLFNNFVNHI 289 >UniRef50_A5MZU7 Predicted transcriptional regulator n=3 Tax=Clostridium RepID=A5MZU7_CLOK5 Length = 289 Score = 303 bits (777), Expect = 6e-81, Method: Composition-based stats. Identities = 66/291 (22%), Positives = 139/291 (47%), Gaps = 4/291 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L+ +FV V + + ++A E++ +SQSAVS + ELE H GVRL +R +R++ +T A Sbjct: 1 MTLRHFNIFVVVCDKMNMTKAAEQLFISQSAVSQVISELEGHYGVRLFERLSRKLYITQA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G++L ++ D + +G +R+ AS TI A+++P+ I++ + + Sbjct: 61 GEKLLSYARYIIKLNMELENDMKTL--GENGSIRIGASVTIGAYVLPKLISQFQKVNSET 118 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 +++ + V + + Q ++D +V D+ + + L+C A Sbjct: 119 DIKVYEENTEKVEKMLLQDEIDIALVEGETTHTDIINVPFMEDELVLICGSGHRFAKLTC 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L+ K ++++ SG+R + + N ++ I + T+ V+ G+GIS++ Sbjct: 179 IEPYELEKEKFIIRERGSGTRRTFEDKMKENHLKWQISWTCNNTDTIKIAVSEGLGISVI 238 Query: 243 PALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 ++ L G+ + +RQ ++ KN+ L+ + D +R Sbjct: 239 SRCSVINELVLGTLCEIPVKEIKFKRQFKIIYHKNKYLTEIMKHFIDFIRQ 289 >UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=Deltaproteobacteria RepID=A0LNI4_SYNFM Length = 302 Score = 303 bits (777), Expect = 6e-81, Method: Composition-based stats. Identities = 89/296 (30%), Positives = 137/296 (46%), Gaps = 5/296 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + +L VF V + SF++A E + L+Q VS V+ LE G +L+DR REV+ T A Sbjct: 1 MDIHRLVVFCRVLEMGSFTKAAEAVCLTQPTVSEHVRALEETLGEKLIDRLGREVLPTPA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L ++ + ++ + LSG + + AS +++P+ I + YP I Sbjct: 61 GKILYQYARDIIQLRDEAVQALEKFKGNLSGALLIGASTIPGTYVLPELIGSFKKSYPAI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 Q L V+ G V+FG++ + E S+ L RD AV Sbjct: 121 QITLRITDSAEVVARTIDGGVEFGVIGARLEDRRIVLEEAFSDELVLAVFRDHPWAVRKS 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQA---NIVQEIGHPATLFPMVAAGIGI 239 V + L G +L++ SG+R +++ AL +G NIV E+G + + AGIGI Sbjct: 181 VSLEELAGEPFILRERGSGTRIVMNQALEAHGFSPTKLNIVAEMGSTEAIRQGIKAGIGI 240 Query: 240 SILPALALP--LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQG 293 SIL A+ L GS V R LV+RKNR +S A + +R Q Sbjct: 241 SILSHRAVAEDLRHGSLFAVPLAGIRFSRPFFLVQRKNRQMSPLCSAFLNHLRFQA 296 >UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F961_ACIC5 Length = 288 Score = 302 bits (776), Expect = 7e-81, Method: Composition-based stats. Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 1/285 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 QL+ +A+ +FSRA ER ++Q ++S V +LE GV+L DR R + +T+A Sbjct: 1 MEFHQLRYVCAIAETGNFSRAAERCQVAQPSLSQQVLKLEEDLGVKLFDRLGRSLRITEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ +L ++ + + + G V V TI+ +L+P+ A R+YP+ Sbjct: 61 GRAFLPHARSILHQMEAARASVAGKSKDVRGSVAVGVIPTIAPYLMPRYTAAFARKYPEA 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + ++ES+R +D ++ P DL+C +L+EP F + +D A Sbjct: 121 RLRIVEETTPVLVESLRNLSIDLAVLALPLRHKDLECIPLLTEPMFAVLPKDHPRASAQT 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + L+G V+ R L AA + + I E G +LF MVAAG+G+S++ Sbjct: 181 LSLKDLRGETFVMLRDGHCFRDLSLAACSHARVTPRIAFESGQFRSLFGMVAAGMGVSLV 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWD 287 P +A+ G V+ R ++ + RS + +A Sbjct: 241 PQMAMDRSAGC-AYVRLSDARAARTVVAATLRGRSFNHMQQAFLR 284 >UniRef50_A4WZV0 Transcriptional regulator, LysR family n=1 Tax=Rhodobacter sphaeroides ATCC 17025 RepID=A4WZV0_RHOS5 Length = 302 Score = 302 bits (776), Expect = 8e-81, Method: Composition-based stats. Identities = 75/303 (24%), Positives = 137/303 (45%), Gaps = 3/303 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M +L+QL+VF +VA+ S++RA E + L+Q AV VK+LE V L++R + + LT Sbjct: 1 MRCTLRQLQVFASVARHASYTRAAEELHLTQPAVFAQVKQLEEALAVVLIERIGKRLHLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+ + L+ + + G++++A T+ + +P+ + E P Sbjct: 61 EAGRAVEATARETLEGIERLEMQLADLQGLRRGRLKIAIVSTV-QYFLPRLLGEFCTLNP 119 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ L +Q V+ + + D I+ P D+ + P LL D LA Sbjct: 120 GIEVALTVTNRQTVIARLAANEDDLCILGQPPEGLDVVATPVAQNPILLLAPADHPLAGA 179 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 VP+ L A +L++ SG+R + A G++ + E+G + VAAG+G++ Sbjct: 180 RAVPFAELAEAPFILREPGSGTRAAAERFFADCGVRPRVRMELGSNEAIKEAVAAGLGLA 239 Query: 241 ILPA--LALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 IL +A+ + + + R + + + LS AA A + + +A Sbjct: 240 ILSQDTMAVEAATRRLVALDVQGFPLMRVWNVAYPRGKHLSVAAAAFLAHLTQGAPSQIA 299 Query: 299 GRE 301 Sbjct: 300 SHR 302 >UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Tax=cellular organisms RepID=CYNR_ECOLI Length = 299 Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 80/289 (27%), Positives = 140/289 (48%), Gaps = 1/289 (0%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 + + F+ VA+ SF+RA + +SQ A+S +++LE GV L DR+ R + LTDAG+ Sbjct: 4 RHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEV 63 Query: 66 LALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFV 125 R L EL + R + G +R+A + T +++ I +A+ + RYP I Sbjct: 64 WRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQ 123 Query: 126 LHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPW 185 L + Q+ + + + + ++D GI P +L+ +L+E L+ + LAV + V Sbjct: 124 LQEMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIPLLTESLALVVAQHHPLAVHEQVAL 183 Query: 186 QALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPAL 245 L KLVL +R ID + G+ +V E + + ++ ++LPA Sbjct: 184 SRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLLPA- 242 Query: 246 ALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 A+ + P++ER +L+RRKN + AA+A + D+ Sbjct: 243 AIATQHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALDKCA 291 >UniRef50_B9ZSB8 Transcriptional regulator, LysR family n=4 Tax=Bacteria RepID=B9ZSB8_9GAMM Length = 340 Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 78/306 (25%), Positives = 131/306 (42%), Gaps = 11/306 (3%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +L+QL+VF + + SF+RA E + L+Q VS +K+L G+ L + R+ T+ G Sbjct: 30 TLRQLQVFEAIVRLGSFTRAAEELHLTQPTVSIQIKKLSTALGLPLFEYVGRKAFPTEVG 89 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 L +L L + M G++R+A T + + P + + RRYPDI+ Sbjct: 90 LLLYDTCREMLGALTNLEMKLAEMHGLKRGRLRLAVITT-AQYFAPSILGQFARRYPDIE 148 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVID-PGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L V+E + D D I+ P + D+ P ++ RD L Sbjct: 149 LSLEVSNFDRVLERLSNNDDDLYIIGHVPERLTDVAVHPFAPNPLVVMASRDHPLVGRRN 208 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 +P + L+ ++++ SG R +GI + E+G + V G+GI++L Sbjct: 209 IPLKELEQETFLMREPGSGIREATLKLFQEHGISPPVRMELGSNEAIKQAVIGGLGIAVL 268 Query: 243 P--ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDV-------VRDQG 293 L+ EG ++ + RQ +V K + LS A+ D VR Q Sbjct: 269 SLHTLSAEGAEGPVALLDVEHFPIHRQWHIVYPKKKVLSVVAQTFLDFAIQDEARVRAQV 328 Query: 294 NALMAG 299 L+A Sbjct: 329 EDLLAA 334 >UniRef50_B1Y5W5 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B1Y5W5_LEPCP Length = 316 Score = 301 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 85/302 (28%), Positives = 140/302 (46%), Gaps = 4/302 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + +QL+VF VA+ SF RA E + L+ AV+ VKELE+ + L DR R+V LT A Sbjct: 4 VTFRQLRVFTEVARHLSFVRAAEALHLTPPAVTMQVKELESAIELPLFDREGRKVSLTTA 63 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + +RLL L R + SG + V T + + +PQ +A +P I Sbjct: 64 GEYFLVYAKRLLSTLKEADDAMARFRKVESGVLSVGMVGT-AKYFVPQLLARFRIEHPGI 122 Query: 123 QFVLHDR-PQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + L ++ ++ ++QG+VD I+ P + E + P + + + Sbjct: 123 ELKLQVGANREQLVALLQQGEVDLAIMGRPPREMATRAEPFAAHPHVFIAPPGHPVLAQG 182 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 L L+ ++ ASG+R L+D + ++ I E+ T+ V AG+G+S Sbjct: 183 RTTLSELASYPLIAREPASGTRALMDRFFQEHRVELRIAMEMPSNETIKQAVMAGMGLSF 242 Query: 242 LPALA--LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 L L L G +V + R +V ++R LS AAEAL + + G A +A Sbjct: 243 LSLHTIGLELRCGLLELVHVENAPIVRTWNIVHMQSRLLSPAAEALRYFMLEHGEAHLAE 302 Query: 300 RE 301 + Sbjct: 303 HD 304 >UniRef50_Q46WQ0 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46WQ0_RALEJ Length = 304 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 94/290 (32%), Positives = 163/290 (56%), Gaps = 1/290 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN SL+QL+ F+ VAQE+ F+RA E++ LSQS+VS + ELE++ G++L DR TR++ +T Sbjct: 7 MNVSLRQLRAFIAVAQERHFTRAAEKLDLSQSSVSALIHELEDNLGLKLFDRHTRQLHIT 66 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG++L +++ + +++S + + + G+V +AAS +A ++P+ I E +P Sbjct: 67 QAGEELLPLVKKAVADIDSAIETSSELRTLGRGRVSIAASSIQAALMLPRFIREFSLGHP 126 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ +HD + V + + G+VDFGI P DL + ++PF ++ D L Sbjct: 127 GVKVDIHDVSEHEVPKMVSSGEVDFGIGTIPEGQPDLTAHRLSTDPFVIVMPPDHPLLRR 186 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W+ + L+ + R +D ALA GI + + E+ P T+ MV AG+GI+ Sbjct: 187 KTLRWEDVAPIPLIGPHKGNPIRDCLDTALAARGITLSRLHEVLLPLTMVGMVEAGLGIA 246 Query: 241 ILPALALPLPEGSPLV-VKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 ++ A L E L V PV+ R++ L+ +RSLS A+ D++ Sbjct: 247 VMSAAVTRLTEALGLATVMPTDPVIHREISLLVHADRSLSPPAQRFRDLL 296 >UniRef50_Q3MEY8 Transcriptional regulator, LysR family n=1 Tax=Anabaena variabilis ATCC 29413 RepID=Q3MEY8_ANAVT Length = 295 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 72/291 (24%), Positives = 127/291 (43%), Gaps = 3/291 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ FVT+A+E F +A ER+ ++Q +S +++LE G L RT R V LT+A Sbjct: 1 MELRHLRYFVTLAEELHFGKAAERLHIAQPPLSQQIRQLEIELGFDLFHRTKRTVRLTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ ++++L +L ++ + G++ V + + +++P + P + Sbjct: 61 GQVFLGEVQQILQQLQQAIQLGQTSSRGEVGQLIVGFVSSAAYNILPIILRNFRACTPAV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + LH+ +E +R+G +D G + P E I E + LA + Sbjct: 121 KLELHEMTTDQQLEWLREGGIDIGFIRPPVEENIFNWETIFQESLMVALPETHLLANQFN 180 Query: 183 VPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 +P +L +L A G LI + + G ++ QE T +VAA +GI+ Sbjct: 181 IPLTSLGNESFILFPRKIAPGLYDLIISLCQQAGFSPHVAQEAIQMQTTVSLVAADMGIA 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 I+PA L + + L + RKN + S + VR Sbjct: 241 IVPASLQNLQRTGVVYKNIQEATAKVALAMTWRKNET-SPTLQRFLHTVRA 290 >UniRef50_B9MIR3 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=B9MIR3_DIAST Length = 299 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 73/300 (24%), Positives = 133/300 (44%), Gaps = 1/300 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN + +QL++F+ +A+ S S A + + ++Q S ++E+ GV L + +R V LT Sbjct: 1 MNITFRQLRLFLALAETGSVSAAAKLMHVTQPTASMQLREVAQAVGVPLYEVVSRRVYLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AGQ LA + E ++ + SG+++VA T + + +P+ + + +P Sbjct: 61 EAGQALARTARAIASEWDAFEQGISGAKGLTSGRLKVAVVST-AKYFVPRLLGSFCKLHP 119 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I L + V+ +R D ++ P L+ ++ P ++ LA + Sbjct: 120 QIDISLEVLNRDHVITRLRANQDDLYVMSMPPGDLPLEDHVLMPNPLVVIAPAGHRLAAK 179 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V LQ + +L++ SG+R DA L + G V E+G + V +G+S Sbjct: 180 KRVALPQLQSERFILREKGSGTRMATDAHLRQLGFAPAAVLELGSNEAIKESVQGQLGVS 239 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 I+ AL ++ ++ Q LV K + LS AE + D+ M R Sbjct: 240 IVSRHALGPHLDGLAILNVQGFPIQSQWHLVWPKGKRLSPIAEVFRGHLMDEAAGWMQSR 299 >UniRef50_A9F7Y4 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F7Y4_SORC5 Length = 327 Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats. Identities = 76/301 (25%), Positives = 127/301 (42%), Gaps = 5/301 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ F VA+E+ F RA +R+G++Q +S +++LE+ G L DR+ R V LT A Sbjct: 1 MDLRHLRYFTAVAEERHFGRAAQRLGIAQPPLSRQIQDLESELGFSLFDRSRRRVELTPA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L + R+ D L + + R +G++ V +++ I + + P + Sbjct: 61 GAVLLAHVRRVFDALELAVHEARRASVGETGRLVVGYLSSLAYSGITELVRTFRGELPAV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L + P Q +E+++ G +D G V P L E + EP + D LA Sbjct: 121 ELALREMPPQEQIEALKDGRIDVGFVRAPLHDARLASECVRREPLLVALPADHPLAARKR 180 Query: 183 VPWQALQGAKLVLQD--YASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 +P + L V+ S L+ G I QE H + +VAAG G+S Sbjct: 181 IPLELLSREPFVVFPRQRGSAFFDLVMGLCRAAGFSPRIAQEALHLD-ILSLVAAGFGVS 239 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 ILP + + + L++ R + + S VR G + R Sbjct: 240 ILPESIKNVGRKGLALRPIVG-APSTDLLVAWRADDA-SPTLRQFLSFVRRVGVSKGKAR 297 Query: 301 E 301 Sbjct: 298 A 298 >UniRef50_B5WR38 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B5WR38_9BURK Length = 309 Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats. Identities = 74/303 (24%), Positives = 126/303 (41%), Gaps = 10/303 (3%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ FV VA+E F+RA ER+G+ Q +S ++ LE G L R +R V LT+A Sbjct: 1 MELRHLRYFVVVAEELHFTRAAERLGIGQPPLSLQIQRLERDIGATLFRRLSRGVELTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLI---PQCIAESHRRY 119 G L +L ++ T D R+ + G +RV + + + + P I E R+ Sbjct: 61 GVLLLDNARHILALVDRTCTDVQRLSRGEIGHMRVGFAG--ATYFLPLVPAIIREYRTRH 118 Query: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGIVIDP-GPVGDLQCEAILSEPFFLLCHRDSALA 178 PD+ +++ + +G VD + P +L E ++ E ++ LA Sbjct: 119 PDVVLSPEQSNTPSLVDGLLEGRVDAAFIRPPIVSADELDVELLVKEDMVVVLPHSHPLA 178 Query: 179 VE-DYVPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAA 235 + VP AL +L +G I +A R G + QE ++ P+V A Sbjct: 179 RAGEPVPLSALAEETFLLFPRAIGAGLYDAITSACQRAGFLPRLGQEAPQIVSIAPLVGA 238 Query: 236 GIGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 G G+SI+P + + + + + L R++ S V R+ Sbjct: 239 GFGVSIVPRSTTQIQTDEVVYLPIAGNAPKAPISLAWRRHNP-SPVVRLFRAVAREMARE 297 Query: 296 LMA 298 Sbjct: 298 WRK 300 >UniRef50_C6D0V7 Transcriptional regulator, LysR family n=4 Tax=Bacillales RepID=C6D0V7_PAESJ Length = 299 Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats. Identities = 78/294 (26%), Positives = 141/294 (47%), Gaps = 4/294 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L QL+ F+TVA+ + + A + ++QS++S +++ LE GV L DR R++ L ++ Sbjct: 5 MELLQLQYFLTVARLEHVTEAARHLHVTQSSLSKTIQRLEEDLGVLLFDRVGRKLRLNES 64 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G + LR ER L EL+ ++ G + +A + A ++P + E ++ P+I Sbjct: 65 GSRFLLRAERALFELDQGKQELNDWSSPEQGTIELAVNT---ASMLPNILREFRKKKPNI 121 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 QF + Q ++ + +GD+DF + P D++C+ + + L LA Sbjct: 122 QFHVQMLTTQEMVAHLHRGDIDFCLSSPPLEGEDIECQIMYRDAILLAVPESHRLAGRSS 181 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V L+ V G+R L+D+ + G + V E PA + +V A IGI+ + Sbjct: 182 VSLPELKEEWFVGVKKGYGTRDLVDSICKKAGFEPKFVYEGDEPARINALVEAEIGIAFI 241 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 P A G ++ + R++ L+ K+R +S AA++ VV + L Sbjct: 242 PGTA-RNSNGQIAYLEIDNNELVREIALLWHKSRYVSRAAQSFRKVVVNYFETL 294 >UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=Q122V6_POLSJ Length = 307 Score = 300 bits (770), Expect = 3e-80, Method: Composition-based stats. Identities = 93/304 (30%), Positives = 150/304 (49%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +N+ L+QL+ FV VA+ SF A E I LS A+S + +LE G RL +RTTREV LT Sbjct: 4 INFDLQQLQGFVAVAERGSFRAAAEHINLSSPALSRRIDKLETILGARLFNRTTREVELT 63 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ R LD+L S + + G+V VA + + + +P ++ + YP Sbjct: 64 PLGRVFLERARTALDDLESAMLGIADIATHRGGRVTVACVPSAALYFLPTVVSNFSQHYP 123 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ + D V++S+ G+ DFGI V ++ E+I ++PF L R+ LA Sbjct: 124 GIRVRVVDETMNQVLQSVLSGESDFGIGFMNTLVPEIAFESIHNDPFVLAMRREHPLARH 183 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V W ++ L+ +SG+R L+D +L + G+ + E+ H ATL MV AG+G++ Sbjct: 184 KSVNWADVEKESLIAVARSSGNRQLLDDSLTKAGLNPSFAFEVSHVATLLGMVEAGLGLA 243 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 +P +AL + + + P R++ L+ R L AAE +R + Sbjct: 244 AVPRMALASTHATLVGLPLRQPQTVRRVGLLTRHGVKLRPAAEMFHQHLRRALKTRKSAT 303 Query: 301 EGDP 304 Sbjct: 304 ADPA 307 >UniRef50_C8VWS6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWS6_DESAS Length = 300 Score = 300 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 72/296 (24%), Positives = 142/296 (47%), Gaps = 7/296 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN++ L+ FVTV + S S+A + + ++Q AVS + LE+H G++LL+R R++V T Sbjct: 1 MNFNF--LQTFVTVIEFNSISKAAKALNITQPAVSKQIASLEDHFGIKLLERLGRKMVPT 58 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG +L + +L+ L ++ M ++ G + + AS +++P+ I ++YP Sbjct: 59 EAGNRLNRHAKIILNSLQQAEKEINEMISEVRGNLVIGASTIPGQYILPKIIGLFKKQYP 118 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ VL V+E + + ++ G + + + + L+ + A Sbjct: 119 QVKTVLEISDSGKVIEKLLEHEIHLGAIGTKVLHDKIASIKLSDDELVLITPLEHPFATR 178 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQAN---IVQEIGHPATLFPMVAAGI 237 V L G ++V ++ SG+R ++ L G+ N I E G ++ V AG+ Sbjct: 179 KTVKAVELAGEQMVWRESDSGTRHAVEEKLTAKGLNVNNLIITAEFGSTESIIGAVEAGM 238 Query: 238 GISILPALALPLP--EGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 GIS + A+P + V++ V++R L ++ K + + AE + + Sbjct: 239 GISFVSHWAVPENEYRRNIAVLRLEDIVLDRNLYIIYPKRKYFNRTAETFINFLHQ 294 >UniRef50_Q1AYT0 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AYT0_RUBXD Length = 293 Score = 300 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 66/294 (22%), Positives = 120/294 (40%), Gaps = 3/294 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L ++ FV A+E F RA R+ ++Q ++S V LE GVRL RT REV LT+A Sbjct: 1 MELSHIRYFVAAAEELHFGRAARRLHVTQPSLSKRVAGLERELGVRLFHRTRREVRLTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ R+L++ + + G+ G++ + ++P+ + E H R+P++ Sbjct: 61 GEIFLEGARRVLEDALRAAEEARKAGRGELGRLEIGFFSPAIYGVLPEILKEYHERFPEV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + LH+ +E +R+G ++ G + P E + EP A + Sbjct: 121 RVTLHEWTSSVQLERMREGKIEIGFMRAPVEEAGFVTEHVFVEPVVAALPEGHPQARREV 180 Query: 183 VPWQALQGAKLVL--QDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V + L ++ + S + R G I QE+ + +VA G+G++ Sbjct: 181 VSPRELADEPFIMVPRSKEPNSFDRYVSICQRAGFSPKITQEVFEIHAIVGLVATGMGVA 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 + L + P +VRR +R S + ++ Sbjct: 241 FVQGSVANLKRPGVVYRPLDDPEARIGTAIVRRSSRP-SPVLRTFLETLQAFVA 293 >UniRef50_D1BNW2 Transcriptional regulator, LysR family n=4 Tax=Veillonellaceae RepID=D1BNW2_VEIPT Length = 307 Score = 300 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 79/292 (27%), Positives = 131/292 (44%), Gaps = 5/292 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 LK FV VA +KSFS+A + +SQSA+S ++K LE+ GV L R + V LTD Sbjct: 1 MDFHHLKYFVEVADQKSFSKAARNLHISQSAISRTIKALEDELGVVLFMRNAKSVELTDG 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G +R++ D + G +R+ A + Q + E + YP I Sbjct: 61 GTIFLTHAKRVVFMFEHLKTDFENEFRLEQGSIRIGIPPITDAPIFAQLLGEFKKVYPQI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L+++ + V S+++G +D GI+ + + + S+P ++ + S LA E Sbjct: 121 ELELYEQGSKKVEISVQEGLIDIGIICTKPNPKEFESFYLTSDPLSVIIPKSSPLAKEKE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + L VL I A G Q +IV E + V+A + I++L Sbjct: 181 IRLEMLADESFVLHKDDFNLHDEIIKACKHTGFQPHIVFETSQRDLMLQTVSANLAIALL 240 Query: 243 PALALPL-----PEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 P+ P GS +VV+ + P + L ++ +K LS A+ D V Sbjct: 241 PSRLCPEVGENTEVGSKVVVRPLVPEIIHTLYVIWKKGHYLSHASRLWLDFV 292 >UniRef50_Q0KE24 Transcriptional regulator, LysR-family n=2 Tax=Cupriavidus RepID=Q0KE24_RALEH Length = 305 Score = 299 bits (768), Expect = 7e-80, Method: Composition-based stats. Identities = 149/291 (51%), Positives = 201/291 (69%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MNY+L+QL+VF+ VA FSRA + +GL+Q AVS V ELE GVRLLDRTTREVVLT Sbjct: 1 MNYTLRQLRVFLAVANTGGFSRAADVVGLTQPAVSRGVAELEEALGVRLLDRTTREVVLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG LA LERLL +L+ TL +T ++G++ G+V +A + TISA L+P +A +YP Sbjct: 61 EAGHALAPALERLLGQLDDTLEETRQLGERYRGRVVIAGAPTISARLMPLYVAACAAQYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +I+ + D Q +E +R G VDFG++IDP L E + ++PF +C RD LA Sbjct: 121 EIRLTVRDNVQADGLEQVRAGAVDFGVLIDPLVRDGLVVEPVATDPFCFVCRRDHPLAQS 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 VPW AL G +LVL D+ASGSRPLID R+G+ +VQE+GH A++F MV AGIG S Sbjct: 181 PSVPWAALHGMQLVLLDFASGSRPLIDRVFGRHGVVPLVVQELGHSASVFGMVEAGIGAS 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 +LP+ +LPLP SPLV + + P ER +++VRR++RSLS AA A+WD+VR Sbjct: 241 VLPSFSLPLPAASPLVWRPLVPCEERSIVMVRREDRSLSPAAAAVWDLVRR 291 >UniRef50_A4J4H0 Transcriptional regulator n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J4H0_DESRM Length = 303 Score = 299 bits (768), Expect = 7e-80, Method: Composition-based stats. Identities = 61/295 (20%), Positives = 144/295 (48%), Gaps = 5/295 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L KVF +AQ ++ ++A + + LSQ ++H++ LE H G +L DR+ +++ LT Sbjct: 1 MNLSHFKVFKILAQTENITKASKLLELSQPTINHNIYLLEQHYGAKLFDRSNKKLKLTRF 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L + ++L+ + + + + +L G + + AS TI+ +++P+ + + YP++ Sbjct: 61 GEVLVKYVNQILNLVEQSEQHIHELVGELRGSLNLGASHTIAENVLPKIMGMFNHDYPEV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + +++ I +D G++ P ++ + + + ++ + LA++ Sbjct: 121 TIHLEVTNTRHIVDHILDNKLDLGLIEGPVTHDNIISKPFMEDELLVVLPYNHPLAIKKN 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQA---NIVQEIGHPATLFPMVAAGIGI 239 + + + VL++ SG+R ++++ L G+ N V E+G+ + V AG+G Sbjct: 181 LTIKEVANLPFVLREEGSGTRVVMESTLKGAGLDPSDLNTVMELGNTQAVIGAVEAGLGA 240 Query: 240 SILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 +IL LA+ + + + + R ++ K + S+ + + + Sbjct: 241 TILSGLAVSKEIQLKTVKTCRISNVNIVRNFSIIINKEKPSSSIIQTFLGFINSE 295 >UniRef50_Q5X4A2 Hydrogen peroxide-inducible genes activator n=4 Tax=Legionella pneumophila RepID=Q5X4A2_LEGPA Length = 296 Score = 299 bits (768), Expect = 7e-80, Method: Composition-based stats. Identities = 72/297 (24%), Positives = 126/297 (42%), Gaps = 2/297 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L+ L FV +A K F A +R +SQ +S +K+LE GV L +RT ++V+LTD Sbjct: 1 MNLRDLHYFVILADVKHFGEAAKRCFVSQPTLSMQIKKLEEELGVVLFERTNKQVLLTDQ 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G +L R ++L ++ + +G++R+ T+S +++P + E YP + Sbjct: 61 GSKLLDRTRKILILIDEMKELARQSEDPFTGELRLGVIPTVSPYMLPLVMPELKNEYPRL 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L + ++ + QG++D I+ P C+ + E F+ C LA Sbjct: 121 KVWLIEDKTHRLITKLEQGELDVAIMALPI-DKRFSCQILYEEKFYFACANTHPLAQAKS 179 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V L+ ++L + R A TL MV AG+G+++L Sbjct: 180 VNINDLKNQPIMLLEEGHCLREQAMAVCQLAKADDIADFTATSLETLRLMVQAGMGVTLL 239 Query: 243 PAL-ALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 PAL L + P R L L R A+ +++ + +A Sbjct: 240 PALSTLTASTNHLKCIPFSEPAPSRILGLFWRAGTPRQVCFNAVAELITKNVQSKLA 296 >UniRef50_A7ZAS3 YybE n=1 Tax=Bacillus amyloliquefaciens FZB42 RepID=A7ZAS3_BACA2 Length = 296 Score = 299 bits (767), Expect = 9e-80, Method: Composition-based stats. Identities = 67/292 (22%), Positives = 134/292 (45%), Gaps = 1/292 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 Q+ F TVAQ + ++A +++ +SQ A+S S+ +LE+ GV+L DR R + L Sbjct: 1 MDWHQINYFQTVAQVQHITQAAKQLSISQPALSRSISKLEDELGVQLFDRKGRNIYLNRY 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ R+E+ + ++ ++ SG + ++ ++ ++P I+ YP + Sbjct: 61 GKMFLHRVEQSIRQIEIGKQEVWNEIHPNSGTILLSFLPSLGMSMVPDVISSFQHMYPHV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 F L Q ++E + +VD + D+ C+ +L+E +L + LA D Sbjct: 121 NFQLTQASNQQIIEQLTSREVDIALTSLRDENDDVICQPLLTEELYLAVSAEHPLASYDE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + + + + +I + G ++V E T +V A +G+S++ Sbjct: 181 IDLKMAEHEPFISFKDTNVLHGMIKELCEKAGFSPDVVFEGEDIVTASGLVGAKLGVSLI 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 P L + + ++ P+ ER++ L RK+ LS AAE ++ + N Sbjct: 241 PDLHV-FDKTKVKLLSVTNPICEREIGLAWRKDGYLSPAAENFIAFIQTRLN 291 >UniRef50_C9KJX6 Transcriptional regulator, LysR family n=2 Tax=Veillonellaceae RepID=C9KJX6_9FIRM Length = 302 Score = 299 bits (767), Expect = 9e-80, Method: Composition-based stats. Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 4/290 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ F ++ ++ +RA ER+ +SQ ++ ++K+LE G++L DR+ +++ LT Sbjct: 1 MELRQLEYFQMASRLRNITRAAERLRVSQPNITVAIKKLEAELGIQLFDRSQKQLALTPE 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G R+E L + + + Q G +++ + A+L P+ + RRY + Sbjct: 61 GAVFLNRVELALRNIQDAVLEVNDYKQLQKGTIKIGVPPMMGAYLFPRIFSSFQRRYSHL 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 +H+ + E + ++DFGI+I G LQ + S LA + Sbjct: 121 DIFMHEEASMSIREQLEHDELDFGIIILSGASNRLQLLPMSKNQIVCCVPASSPLAKKKA 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + K+V+ S R I + GI NIV E TL +VA G+GI+ Sbjct: 181 ISMNDVADTKIVMLKEGSFLRQTILGRMKDEGITPNIVLESNQINTLKGLVANGVGITF- 239 Query: 243 PAL-ALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 L + + P + + L +K+R +S AA++ D +D Sbjct: 240 -RLDMVADEMPGLKTLPLADP-IFVDVGLAWKKDRYISKAAQSFIDFCKD 287 >UniRef50_A9B3V4 Transcriptional regulator, LysR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3V4_HERA2 Length = 298 Score = 299 bits (767), Expect = 9e-80, Method: Composition-based stats. Identities = 80/301 (26%), Positives = 131/301 (43%), Gaps = 3/301 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L QL+ F VA+ + ++A ++Q ++S +++ LE GV L DR R V L+DA Sbjct: 1 MELSQLRYFEAVARLGNVTKAAHEQHIAQPSLSKALRALEQELGVHLFDRVGRGVELSDA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L R+L EL + G V + + T+ LIPQ +A +RRY I Sbjct: 61 GKLLLPYARRVLAELQAARHALQSRADLTVGHVSLGVTPTVGTRLIPQALAAFNRRYRGI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 Q LH+ ++E + G VD IV ++ ++SEP + A Sbjct: 121 QLELHEAGASELVELLNAGVVDLAIVSALVH--GVESTTLMSEPLVVAVGLQHRFAQRQS 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L+ +L R + G IV + G T+ +VAAG+G++++ Sbjct: 179 IAANELRDEGFILFPQGYELRNYTLQLCEQAGFAPRIVLDGGEMDTVVSLVAAGLGVAVV 238 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGREG 302 P LA+ G + ++R L L+R R S AA AL V+ + + Sbjct: 239 PQLAIDQRMG-LHALMIDAGGLQRTLRLIRHSQRQPSPAAAALHRVLHEWVSQHYPSASA 297 Query: 303 D 303 + Sbjct: 298 N 298 >UniRef50_B1ZUQ0 Transcriptional regulator, LysR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUQ0_OPITP Length = 301 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 70/293 (23%), Positives = 128/293 (43%), Gaps = 2/293 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L QL+ V VA +F+RA ER ++Q ++S + LE G +L R R VLT+A Sbjct: 1 MELYQLRYAVAVADTGNFTRAAERCNVTQPSLSQQIINLEKEVGHKLFHRLGRRAVLTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G R +++ ++ + ++ ++ V A QT++ +L+ I R P++ Sbjct: 61 GAVFIERARQIVYDVENAAKELSDHPSLDR-RITVGAIQTVAPYLLLPMIEVCKRELPNL 119 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 Q L + + ++ + +GD+D IV P + E +++EP L+ ++ A Sbjct: 120 QINLIEDFRVDLVHGVVEGDLDLAIVTLPVDDPRVSVEPLMTEPLLLVVGKNHPFATRKE 179 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L V +S I + + Q + ATL +VA G+ ISIL Sbjct: 180 ISINDLADETFVTMGESSTLAAQIRSFFGGHNFQPKVGYRCAQVATLKTLVAMGLAISIL 239 Query: 243 PALALPLPEGS-PLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 P + + ++ R+L++VR R S A+ ++ +Q Sbjct: 240 PRVDQEEKDRETLTYLRLTGSAPTRELVVVRHLQRYQSRGAQQFLQLLHEQVR 292 >UniRef50_Q5WCI6 LysR family transcriptional activator of glutamate synthase n=6 Tax=Bacillales RepID=Q5WCI6_BACSK Length = 301 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 128/291 (43%), Gaps = 2/291 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++QL F+ VA+ + + A + ++QSAVS + LE+ GV L R R V LT Sbjct: 1 MEIRQLLYFMEVAKREHVTEAAAALHVAQSAVSRQIFNLESELGVDLFIREGRRVKLTPI 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ R++ ++ ++ R+ G +RVA +++A+ +P I ++YP+ Sbjct: 61 GKIFLERIKHAMNVIDDAKREVQEYLDPKKGTIRVAFPISLAAYTLPTAIYAFRKQYPEA 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVID-PGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 +F L + +++ + +GD + ++ P + + +E L LA Sbjct: 121 KFQLKQGLYRELIDGVIKGDYNMALIGPVPMEEKKITPRILFAERIVALLPIHHPLAKSA 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + L+ VL R L+ A + G I E L +V+AG+G+++ Sbjct: 181 EINLLDLKNDPFVLLPEGFVFRDLVINACSEIGFVPQIAFEGDDIDALKGLVSAGLGVTL 240 Query: 242 LPALA-LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 +P + + S + + P V R + ++ R L E ++ +++ Sbjct: 241 MPEVTLVDNTPRSTVKIPLSEPNVTRTVGVITPTERGLLPTEELFYEFLQE 291 >UniRef50_D2P368 Transcription activator of glutamate synthase operon GltC n=18 Tax=Listeria RepID=D2P368_LISMO Length = 295 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 71/289 (24%), Positives = 120/289 (41%), Gaps = 2/289 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QLK F+ VA+ + ++A E + ++QSAVS + +LE GV L DR R + LT Sbjct: 1 MELRQLKYFMEVARVEHMTKASENLHVAQSAVSRQITKLEEELGVHLFDRVGRNMQLTSV 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ + L+EL G VRV ++S ++P I+ +YP I Sbjct: 61 GQDFLKQAAIALNELQKAEALVTEYTDPAKGTVRVGLPNSLSTKVLPSVISTFREKYPQI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVID-PGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + + + + E + G +D + P ++ E L+ + LA Sbjct: 121 TYQFMEGTNEELTEMLLSGVLDMTFLSPVPESSEQIEAIRFFDEKLKLIVPKTHPLAENF 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V + L K VL ++ A + G + I + T+ +V AG+GISI Sbjct: 181 TVSLKELASEKFVLYPEDFDLYKIVTKAANKKGFEPQIAFQSRDFYTIQGLVGAGLGISI 240 Query: 242 LPALALPLPE-GSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 LP + L + + R + ++ K R+LS + + Sbjct: 241 LPEMILDGAIFKETKSIALRDKELRRSVGIITTKKRNLSPSENLFRSFI 289 >UniRef50_A0RKW5 Transcriptional regulator, LysR family n=81 Tax=Bacillus RepID=A0RKW5_BACAH Length = 306 Score = 298 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 75/291 (25%), Positives = 135/291 (46%), Gaps = 4/291 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN + LK+FVTV ++K FSRA E + LSQ VS ++ LEN G L+ R+ + V +T Sbjct: 10 MNVDI--LKIFVTVVEQKHFSRAAELLNLSQPGVSMHIRNLENEFGTTLIQRSPKHVQVT 67 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG L + +++L + + ++G +R+ AS TI +L+P+ +A P Sbjct: 68 EAGNILYIHAKQMLSLYEDAKQKINELHNVVTGTLRIGASFTIGEYLLPKILANYANENP 127 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ + V++S+R +D G+V D+ E + + L+ + L Sbjct: 128 HVEVHTFISNTEDVLQSLRSNQIDIGLVEGQVVYADVDVETFMQDEMKLVVPPNHPLLRT 187 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + + LQ VL++ SG+R D + ++ ++ ++ V+AG+GI+ Sbjct: 188 NEMNESTLQDQVWVLRESGSGTRAYSDRFIHQHHLKMKRFFTFSSIQSVKEAVSAGLGIA 247 Query: 241 ILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 IL + L V+ + R +VR K S A + + V Sbjct: 248 ILSDWTVRKELLAKELFHVEVPNEQLIRPFSIVRGKYFIPSKAIQVFLNHV 298 >UniRef50_A4XTW7 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas mendocina ymp RepID=A4XTW7_PSEMY Length = 309 Score = 298 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 69/287 (24%), Positives = 134/287 (46%), Gaps = 3/287 (1%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 + +QL+ F+ VA+ S + A + L+Q +VS + +LE + L ++ + + LTDAG Sbjct: 12 TFRQLETFLAVAEHLSVTEAARTLHLAQPSVSTQLAKLEQALQMELFEQLGKRLYLTDAG 71 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 +++ + D L+ ++ +G++R+ A T + +L+P+ + R+YP ++ Sbjct: 72 REVQAGAREIFDALDRLEMRLAQLNGLTTGQLRLGAVTT-AKYLVPRLLGPFCRQYPQVE 130 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 L+ + V+ + D + P DL+C A+ P ++ L+ + + Sbjct: 131 VQLNIANRSDVIRCLEDNRDDLYVFSQPPDHLDLECVALAENPLVVIAPAGHRLSGQR-I 189 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 W+ L + ++ SG+R I+ AR+G I + VAAG+GI+IL Sbjct: 190 RWEQLAQEPFLSREPGSGTRLAIEDHFARHGWPYKPHMTIASNEAIKESVAAGLGIAILS 249 Query: 244 ALAL-PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 L G+ + + + Q LVR + ++LS AA+A Sbjct: 250 RHTLIHTAVGNLVELDVEDFPIANQWYLVRWRRKALSPAAQAFSSFA 296 >UniRef50_Q0F2Z7 Transcriptional regulatory protein, LysR family n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2Z7_9PROT Length = 308 Score = 298 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 131/300 (43%), Gaps = 3/300 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ SLKQ K+ V S++ A + + ++Q AVS +K++E G++L +R+ +++ T Sbjct: 6 MHISLKQFKIIEAVVDYNSYTEAAKALYMTQPAVSMQIKQIEGQLGLQLFERSGKQIKAT 65 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG++L + ++ + GK+ + + +++ P+ +A H +YP Sbjct: 66 EAGKELLHYARNIRQQMEEAKTVLEELKGLKRGKLHL-TMASTASYFAPRLLAAFHHQYP 124 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ L + +++++ D I+ P L L P ++ + LA Sbjct: 125 GVKVTLDVTNRSGLLDALDNNTTDMAIMGRPPEGHALTGIPFLDNPLVVIAWPEHPLACS 184 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 D +P + ++++ ASG+R + + + + E+ + V A +G+ Sbjct: 185 DSIPLSDVADESFIVREAASGTRMATERYFSEHRLSLTPGMEMNRSEAIKQAVMAELGLG 244 Query: 241 ILPALALPLPEG--SPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 I+ + + +++K + R +V R N+ + + D + +L+ Sbjct: 245 IVSLHTIEMELTLKRLVILKVEDFPIMRHWYIVHRNNKRFAAIQKVFRDFAVSESRSLLQ 304 >UniRef50_Q7WCW0 Probable LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7WCW0_BORBR Length = 305 Score = 298 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 93/297 (31%), Positives = 144/297 (48%), Gaps = 3/297 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN + +QL F+ VA +SFS+A + + ++Q A++ +++LE GV L RT R LT Sbjct: 1 MNVTFRQLTAFIEVASSRSFSQAAQALHVTQPALTAMIQKLEAQLGVVLFTRTRRGAELT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G++L L+R+L L + D G V +A ++S IP IA + YP Sbjct: 61 TTGRELLPELQRILANLEVVIEDVRGAASPRGGTVTLACIPSLSNTWIPSLIARVEQAYP 120 Query: 121 DIQFVLHDRPQQW--VMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALA 178 I+ +L D + + E +R GD+D+G+ L+ + + + + +D LA Sbjct: 121 RIKVILKDAMTENRSIHEMLRTGDIDYGVGSPSVEQDGLEFDLLAHDELVAVVPQDHPLA 180 Query: 179 VEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 V W L + L+ Y S R L+D A A NGI +E+ T MV AG+G Sbjct: 181 RRTLVRWSELAESPLIGMSYQSHVRMLVDEAFAANGISKRPKREVSLITTAIGMVRAGLG 240 Query: 239 ISILPALALPLPE-GSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 +S+LP A+ + V++ P V R L + RSLS AA L V+D G Sbjct: 241 VSVLPTTAIEVCNVAGLKVLRLHAPRVRRPLGFLHLPTRSLSPAARLLLRFVKDAGP 297 >UniRef50_B6FPK4 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPK4_9CLOT Length = 301 Score = 298 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 144/291 (49%), Gaps = 4/291 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +++ L+ FV V Q++S ++A E + +SQ +VS +++ELEN+ +RL DR + + +T+ Sbjct: 1 MTIRHLRTFVIVFQKESITKASEILHVSQPSVSLAIQELENYYHIRLFDRIGKRLSITEQ 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L ++ + + G +R+ +S TI ++PQ I E +RY ++ Sbjct: 61 GKWLYDYALHIVSMFDEMETEVKTWNN--KGTLRIGSSITIGNFILPQLIEEFQKRYREV 118 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + + + I +VD ++ +Q E ++ +P L+C +S L ++ Sbjct: 119 EIKVSVCNTKTIEQYILNNEVDLALIEGKTEYEQIQMEHLMEDPLCLICAANSELVKQEK 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L+ ++L++ S R +I+ +L + I ++ E + VA +GISIL Sbjct: 179 ISLIDLERYPMILRERGSAVREMIEESLGYHQIHHRVIWESVSTQAIIRAVAKKLGISIL 238 Query: 243 PALALPLPEGSPLV--VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 P L + LV ++ + RQ + K + L+ AA+ ++ ++ Sbjct: 239 PYLLVRDELARGLVKQLQVEEFHLSRQFSIAYHKKKYLTPAAKGFMELCKE 289 >UniRef50_D0KYG7 Transcriptional regulator, LysR family n=3 Tax=Gammaproteobacteria RepID=D0KYG7_HALNC Length = 312 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 77/306 (25%), Positives = 139/306 (45%), Gaps = 9/306 (2%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 ++LKVF TVA+ SF++A E + +Q AV+ V++LE H RL DRT V LTD G Sbjct: 4 RRLKVFNTVARLLSFTKAAEALHTTQPAVTFQVRQLEEHFDTRLFDRTHNRVTLTDVGHV 63 Query: 66 LALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFV 125 + ER+ + + R M ++ G + + AS TI+ +++P + + ++ D+ Sbjct: 64 VYEISERMFELYDEMDRRVKEMTGEVGGSLNIGASTTIAENMLPALLGKFRLKHRDLAVR 123 Query: 126 LHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPW 185 L + ++ + VD IV +L E + ++ D LA + V Sbjct: 124 LKVGNTEAIVSMVEHNVVDLAIVEGTVGNKNLLVETCRRDELVVILPPDHQLAGLESVSL 183 Query: 186 QALQGAKLVLQDYASGSRPLIDAALARNGIQ--ANIVQEIGHPATLFPMVAAGIGISILP 243 L + ++ SG+R ++ L +G ++ E+G P + V AG+G+SI+ Sbjct: 184 DQLMSYDFICREEGSGTREMVLNYLIEHGYSDGWDVCMELGSPEAIKGAVQAGMGLSIMS 243 Query: 244 ALALPLPEG-SPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGREG 302 A + L ++P + R VR++++ A E L + RD Sbjct: 244 ASGITKELKLGLLKAVPLSPRLFRDFSFVRQRHKFRLPAMEDLLEFSRDY------CSNS 297 Query: 303 DPLYQI 308 P++ + Sbjct: 298 SPMHDL 303 >UniRef50_Q0K6D4 Transcriptional regulator, LysR-family n=2 Tax=Cupriavidus RepID=Q0K6D4_RALEH Length = 301 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 96/298 (32%), Positives = 163/298 (54%), Gaps = 1/298 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN SL+QL+ F+ VAQE+ F+RA E++ LSQS+VS + ELE + G++L DR TR++ +T Sbjct: 1 MNVSLRQLRAFIAVAQERHFTRAAEKLDLSQSSVSALIHELEGNLGLKLFDRHTRQLHIT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG +L +++ + +++S + ++ + G+V ++AS +A ++P+ I E +P Sbjct: 61 QAGAELLPLVKKAVADIDSVIENSSELRTLGRGRVSISASSIQAALMLPRVIREFCVSHP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ LHD + V + + G+VDFGI P DL ++S+PF ++ L Sbjct: 121 GVKVELHDVSEHEVTKMVSSGEVDFGIGTIPEGQPDLSAHRLMSDPFVIVMPAHHPLRRR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W+ + G ++ + R +D ALA GI V E+ P T+ MV AG+GI+ Sbjct: 181 KTLRWEDVAGLPVIGPHKGNPIRDCLDTALAARGISLQRVHEVFLPLTMVGMVDAGLGIA 240 Query: 241 ILPALALPLPEGSPLV-VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALM 297 ++ A L L V PV+ R++ L+ +RSLS A+A D++ L Sbjct: 241 VMSAAVTRLTSALGLATVMPTDPVIHREISLLVHADRSLSPPAQAFRDLLMRYRAKLA 298 >UniRef50_B1I114 Transcriptional regulator, LysR family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I114_DESAP Length = 296 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 78/293 (26%), Positives = 139/293 (47%), Gaps = 5/293 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L L+ FV VA+ KSFSRA + + L+Q AVS + LE H G +L++RT+R V LTDA Sbjct: 1 MNLSYLETFVMVAKHKSFSRAAKTLSLTQPAVSKHISLLEAHYGTKLVNRTSRRVELTDA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L R++ + + +++ G++ + AS +++P+ +++ + YP + Sbjct: 61 GIVLYHFAGRIIATMERAKEEIVSFSEEVKGRLSIGASTIPGHYILPRILSDFKKEYPLV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L V+ +++ + G++ P ++ C S+ L+ RD L Sbjct: 121 NVSLEVSNTGKVINRLQEEAIQVGVIGAPVDSPEINCTEFSSDEVVLIMPRDHPLVFRKE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGI---QANIVQEIGHPATLFPMVAAGIGI 239 + L G K+V+++ SG+R +++ LA I I E G + V AG+GI Sbjct: 181 LVTDDLVGEKVVVRENDSGTRRIVEEKLAAADIPLDSLQIAGEFGSTEAVLAAVEAGLGI 240 Query: 240 SILPALALP--LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 S + A EG ++ R L ++ ++RSLS A ++ Sbjct: 241 SFVSRWAAEKVALEGRIVMRTLQDLRFSRSLYIIYLRDRSLSRPTHAFLSFIK 293 >UniRef50_Q7NKC0 Nitrogen assimilation transcriptional activator n=1 Tax=Gloeobacter violaceus RepID=Q7NKC0_GLOVI Length = 326 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 65/294 (22%), Positives = 118/294 (40%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 +QL+ F+ + SF A E+ G+SQ +S + LE G L DRT R LT G+ Sbjct: 15 RQLQYFLALNHCGSFRLAAEQCGVSQPGLSKQIMALEGELGGPLFDRTGRRASLTPLGEC 74 Query: 66 LALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFV 125 R EL + G + + G++ +A +++A+L+P +A +++P Q Sbjct: 75 FLPYARRAYKELEQSRAAIGELLKPDRGEICIAGLHSVNAYLLPALLAVFRQKHPGTQLR 134 Query: 126 LHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPW 185 L + +++ + VD I++ P +L + E +L LA V Sbjct: 135 LTSLGSERIIKVLLDRLVDAAILMGPVHSPELVSTPLYEEELVVLLPAHHPLARRPSVRL 194 Query: 186 QALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPAL 245 + V+ R + G ++ E+ MV +G++ILP Sbjct: 195 AEVAILPQVVFRDGYAMRTALVQHFRAIGATVDVAVELNTLEAFKEMVRQEVGVAILPLC 254 Query: 246 ALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 A+ ++ + P + R++ LV RK+ A +V + A Sbjct: 255 AVQHLGTDLVIARLEEPSITRRVELVCRKDNYQVPVVAAFTRLVAEHLPTAFAR 308 >UniRef50_B7JB31 Rubisco operon transcriptional regulator n=5 Tax=Acidithiobacillus RepID=B7JB31_ACIF2 Length = 332 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 70/288 (24%), Positives = 129/288 (44%), Gaps = 3/288 (1%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +L QLK+F VA+ SF+RA E + L+ A+S V++L G L ++ +++ LT AG Sbjct: 31 TLHQLKIFAAVARHMSFARAAEELHLTPPALSIQVRQLAEAVGQPLFNQIGKKIYLTPAG 90 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 + L +LD L ++ + G ++VA T + + IP+ + +P + Sbjct: 91 EALTSACHDVLDRLEYFTQEIAALQGLEKGSLKVATLST-AKYFIPRIMGGFCTEHPGVA 149 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 L ++ ++E + + D I+ P ++ EA P ++ D LA E + Sbjct: 150 TALFIGNREALLERLARNQDDLYILGQPPEHINVVAEAFADNPLVVVSRSDHPLASEKDL 209 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 L+ A +L++ SG+R + ++G+ E G + VA G+GI++L Sbjct: 210 EPSRLRDAPFILREPGSGTRLAAEKFFEQHGVVLRTRMEFGSNEAVKQTVAGGLGIAVLS 269 Query: 244 ALA--LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 A L G +++ +ER+ V + LS A + Sbjct: 270 ASTIHAELASGELVILDVRGFPLERKWYAVYPAGKLLSPIVRAFMGCL 317 >UniRef50_C7I2X4 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I2X4_THIIN Length = 313 Score = 297 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 69/307 (22%), Positives = 126/307 (41%), Gaps = 10/307 (3%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ FV VA+E+ F+RA +R+ +SQ +S ++ LE GV L R V T A Sbjct: 1 MDLRHLRYFVAVAEERHFTRAAQRLHVSQPPLSQQIQALETELGVPLFTRGRGGVQRTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAH-LIPQCIAESHRRYPD 121 G L +LD + + T ++G+ +G++ V + ++ ++P+ + + +P Sbjct: 61 GDALLPLARSILDAVEHAVAQTRQVGRGETGRLAVGFAGSMPFTDVMPRLLRDFRAAWPQ 120 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPG--PVGDLQCEAILSEPFFLLCHRDSALAV 179 + L ++P Q ++ + +D G + L + EP H D LA Sbjct: 121 VALDLREQPSQSQIDDLLAHRLDLGFIRTTQLMHDPRLSTLVVQREPLLAALHADHPLAA 180 Query: 180 EDYVPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGI 237 + L+ V+ +G R A A+ G +I QE+ TL +++AG+ Sbjct: 181 RASLRLNDLRDQPFVIYSASLGAGLRQQTLALCAQAGFNPHIAQEVHEMPTLIGLISAGL 240 Query: 238 GISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALM 297 G+ I+ A +++LV R++ Q AL+ Sbjct: 241 GVGIVAASMQRAQLPWVAYRPLADVQASTEVLLVWRRDDPQPP-LRNFIA----QAKALL 295 Query: 298 AGREGDP 304 P Sbjct: 296 PQAASAP 302 >UniRef50_B5JV63 LysR protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JV63_9GAMM Length = 307 Score = 297 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 127/295 (43%), Gaps = 3/295 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +++ L+ + +A+ + F RA + +SQ +S +K+LE V L++R ++V+LT+ Sbjct: 1 MNIRDLQYLMALAEHQHFGRAADACHVSQPTLSTQIKKLEGELNVTLVERDNKKVMLTEV 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G + R +L ++ + SG++ + TI +L+P + +R+PD+ Sbjct: 61 GNAVVERTADILRGVDEIRDIALQASDPESGRLALGLIPTIGPYLLPYAMRAIKKRFPDL 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L++ +++ ++ G +D I+ P + I +E F + LA Sbjct: 121 RIYLYEAQTADLVDMLKSGKIDAAIMALPVDDDRIDNIPIYNEAFLAALPFNHPLADRSL 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L+ ++++L + R G TL MVA+G G++++ Sbjct: 181 LNPSELKDSEMMLLEDGHCLRDQALEVCQNMGASEMSGFRATSLETLRQMVASGAGVTLM 240 Query: 243 PALALP---LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 P LA + +V P +RQ+ + R + + L + ++ Sbjct: 241 PTLAAETNQIEGSDVAIVPFEEPQPQRQVGIFFRPSSPRKALFKELGQAIAERLP 295 >UniRef50_UPI000178812A transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178812A Length = 312 Score = 297 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 127/296 (42%), Gaps = 3/296 (1%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 + ++QL+ F+ V QE F+RA E++G++Q +SH +K +E+ G+ L DR +++ +T+ Sbjct: 13 DMEIRQLEYFMAVCQELHFTRASEKLGVTQPTLSHQIKAIEDELGMPLFDRIGKKIAITE 72 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 AG L + S + + G++ V L+ + + + H Y + Sbjct: 73 AGFILLKHCHTVFHSFKSVREEIQELQDIKRGRLSVGVLPGELNALVCRLLPDFHEAYSE 132 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 +Q + V E + ++D + I P + + + E +L+ + D LA Sbjct: 133 VQVRVI--SADNVAERLLNNEIDLALTIIPVHDERIVSQLLYKEKLYLVVNADHPLAEGP 190 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V +AL+ LVL R +D+ I EI ++ ++ AG+G SI Sbjct: 191 EVSLEALKDLPLVLFPKNYRCRHQLDSICNLKEIDLRPAIEIDAIESMITLIEAGVGCSI 250 Query: 242 LPA-LALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 L L + +V RQ+ L+ K++ +++ Q + L Sbjct: 251 LSETLMKQWDKPGVKIVNIAENPFLRQVGLIYHKDKYRGQVVLKFTELLHKQISQL 306 >UniRef50_A1SY80 Transcriptional regulator, LysR family n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY80_PSYIN Length = 294 Score = 297 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 133/291 (45%), Gaps = 4/291 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 K+L F +AQ +F++A E +G++QSA+S S+++LE ++L++R R++ +T Sbjct: 1 MDFKRLYYFTVLAQTGNFTKAAEELGIAQSALSMSIQKLEKQLALKLINRAERKMSITSD 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ L +++LD + + SG + + I ++ +P +A +RYP I Sbjct: 61 GQVLLKHAQKILDNVKQAKIQLQELKGLESGTINLGTPAMIGSYYLPDTLALFKQRYPGI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 Q +H+ + + G++D ++ +++C + E R+ A Sbjct: 121 QINIHEAGTATLANMLLDGELDLAMIRADRHHDNIRCITLAKEQIVACVPREHEFAKCYN 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS-I 241 + + LVL R + + ++GI +I E L ++ IGIS Sbjct: 181 ITLEQFCNQPLVLFREGYFLREAVSSYCQQHGINPDIRFETNLIELLKSLIRKKIGISTC 240 Query: 242 LPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 LP + L E S LV P + L + + + LS A++AL ++++ Sbjct: 241 LP---IILTEDSELVTVPFNPPIPIHLGIGWKASHYLSQASQALVTFLQEE 288 >UniRef50_C6D0W9 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D0W9_PAESJ Length = 296 Score = 297 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 64/292 (21%), Positives = 130/292 (44%), Gaps = 3/292 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++QL+ F + E F+RA +++G++Q +S+ +K+LE GV L R +++ LT+A Sbjct: 1 MEIRQLEYFQAICDELHFTRAADKLGITQPTMSYQIKQLEEELGVPLFHRIGKKIALTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L + ++ + + G + + L+ + + H +YP I Sbjct: 61 GFILLNHSRNIFRSIDGAREEISELHHMERGSLTIGTLIGEINDLVSGLLVDFHNKYPGI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + V++ + Q ++DF + I P ++ E F+ + H +S L+ E Sbjct: 121 SIKLLAL--EDVVDPLLQDELDFAVTIFPVDDDRFSKVSLYEEEFYFVAHSNSPLSGEPS 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V + +++ R LID + +G+ V E ++ +V +G G SIL Sbjct: 179 VTIEEAMKEPIIMFPKTHRCRQLIDTVCSMHGVAWEPVIETSAIKSILSLVQSGAGASIL 238 Query: 243 PALALPL-PEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQG 293 L L P+ + +++ P + R++ + K+R + A A + + Sbjct: 239 SKTLLELYPDQNMIMIPISNPSLRREVGIAYLKDRYIGKATIAFMKQLTTRF 290 >UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A1WHL2_VEREI Length = 305 Score = 297 bits (761), Expect = 4e-79, Method: Composition-based stats. Identities = 90/305 (29%), Positives = 147/305 (48%), Gaps = 1/305 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN+ L ++ FV VA SF A + + +SQ A+S V++LE G RL +RTTR+V L+ Sbjct: 1 MNFDLSDMRAFVAVADLGSFRAAAQTLHISQPALSRRVEKLEQAMGFRLFERTTRKVELS 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ + +L EL + L M +L G+V VA + HL+ + R++P Sbjct: 61 AIGRSFVPKARHVLSELENALLGMTDMSDRLRGQVTVACVPSSVPHLLAGAVEAFQRKFP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ L D ++ ++ + + DFG+ DL+ + ++ EPF L C LA + Sbjct: 121 RIRVRLIDETATEILLAVVRSEADFGVSYWGAQEPDLEFQGLVQEPFVLACLPGHPLARK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V W L V +G+R LID AL+ E H L ++ AG+G+ Sbjct: 181 RRVKWAELAQHDCVTLPPGTGNRMLIDQALSTVAYPPRWTCEARHVPALLSLIEAGVGVG 240 Query: 241 ILPALALPLPEGS-PLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 +P A+ +G+ V+ + P V R + +++R+ R L AA+A D++ A A Sbjct: 241 AVPRFAIRGGQGATLASVRLVEPEVTRTIGVIKRRARPLMPAAQAFHDLLVAAHRASSAQ 300 Query: 300 REGDP 304 P Sbjct: 301 ARPLP 305 >UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7X5_ACIC5 Length = 305 Score = 297 bits (761), Expect = 5e-79, Method: Composition-based stats. Identities = 80/305 (26%), Positives = 151/305 (49%), Gaps = 6/305 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M L+ ++ F+ VAQ +F+RA + + +SQSA++ +++LE GV+L DR R V LT Sbjct: 1 MINELRHIRAFLAVAQHANFTRAAQELHVSQSALTVQIQQLEEALGVKLFDRNKRRVALT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 DAG+++ L+R++ + + + T + G + +A ++++ ++ ++ +P Sbjct: 61 DAGREVIAPLQRIVVDAEAIVSRTREITGLRRGVLSMAVLPSMASGILSTALSRFTAAHP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I +HD V+E +++ +VDFG+ +L + ++ F L+ Sbjct: 121 GIMIHIHDVVADQVIEKVKKEEVDFGVATVMHADKELTLMPLFTDRLFAFLPEQHPLSSR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V Q + LVL + R ++D AL +G+ A E + +T +V AG GI Sbjct: 181 ASVSLQQISDYPLVLMARGTSVRSMVDQALRDHGLTATAAYEANYMSTALSLVRAGFGIG 240 Query: 241 ILPALALPLPEGS-PLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 ILP A + + + + P + R + ++ RK RS S A + + ++RD + Sbjct: 241 ILPEDAGTMGSAQNLVALPIVRPQLTRPIHVLMRKGRSASPAVQQMLQILRD-----ITR 295 Query: 300 REGDP 304 + GDP Sbjct: 296 KSGDP 300 >UniRef50_C9KJ25 Transcriptional regulator GltC n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ25_9FIRM Length = 307 Score = 296 bits (760), Expect = 5e-79, Method: Composition-based stats. Identities = 76/286 (26%), Positives = 127/286 (44%), Gaps = 3/286 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L QLK F +A+ F++A E + +SQSA+S S+++LE GV L +R R LT+A Sbjct: 1 MELTQLKYFQAMAKCHHFTQAAEEMAVSQSALSRSIQKLEQELGVTLFERHGRTSELTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ+ ++R++ EL ++ + +G V ++ ++ +P + + H RYP I Sbjct: 61 GQKFLFHVDRVIRELALAEQEI-ELDNGGAGVVHLSFLHSLGDTFLPLILRQFHERYPHI 119 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L+ + + E + G+ D + D + SE FL+ D LA + Sbjct: 120 DVKLNQQNSSMLSEQLTSGETDICLCST-MNEPDTAWMYLWSEEMFLVVPEDHPLAQKSR 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V + ++ V R ++ L IV E TL VAA +G+SIL Sbjct: 179 VNLREIEDEPFVALKPEYTLRQQVNQFLDLAESHPQIVFEGDEVHTLVSFVAAHLGVSIL 238 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDV 288 P + G + V P+ +R + + +R LS AA Sbjct: 239 PHVPCTEHLG-VVFVPISFPLCKRAVGIAWNTSRPLSPAAMTFQQF 283 >UniRef50_B1Z4Z1 Transcriptional regulator, LysR family n=5 Tax=Proteobacteria RepID=B1Z4Z1_BURA4 Length = 313 Score = 296 bits (760), Expect = 6e-79, Method: Composition-based stats. Identities = 98/295 (33%), Positives = 155/295 (52%), Gaps = 1/295 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +N+ L L+ F V + SF +A + I +SQ A+S + +LE GVRL +RTTR V LT Sbjct: 3 INFDLTDLQAFRAVVELGSFRKAADAISISQPALSRRIDKLEEALGVRLFERTTRSVTLT 62 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ A E+LLD+L+ L + G V +A +++ + +P IA HRR+P Sbjct: 63 TVGRVFAPSAEQLLDDLDVALLGIRDVSSSRLGHVTIACVPSVAYYFLPNVIASYHRRFP 122 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ L D V+ ++ G+ DFG+ ++ + +L E F C RD LA + Sbjct: 123 RIRVKLLDAGANEVLSAVISGEADFGVSFMGSQEPEIDFKLLLQERFVAACRRDHPLARK 182 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V W L + V D SG+R L+D AL +A V E H TL ++ AG+G++ Sbjct: 183 KRVTWNELYEYEYVSVDKTSGNRLLLDQALTTVAPRAPSVCETRHVTTLLGLIEAGLGVA 242 Query: 241 ILPALALPLPEGSPLV-VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 +P++A+P + L V + PVV+R++ +V+R+ R L+ AAE + D Sbjct: 243 AVPSMAMPGHDHPLLTSVPLVEPVVKRRVGIVKRRGRPLTPAAEEFHRAIVDAKR 297 >UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Actinomycetales RepID=A4FE82_SACEN Length = 294 Score = 296 bits (760), Expect = 6e-79, Method: Composition-based stats. Identities = 82/293 (27%), Positives = 134/293 (45%), Gaps = 4/293 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ FV VA+E F+RA +R+ ++QS +S S++ LE G RL RTTR V LT A Sbjct: 1 MELRQLEYFVAVAEECHFTRAAKRLHVAQSGLSASIRSLERELGARLFHRTTRNVTLTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L R L ++S + L G++ + Q + +P +A +P I Sbjct: 61 GHALLHEARRALCAVDSARDAVAAVRGLLRGELSIGTLQCLHVVDLPPVLAGFVTAHPGI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGD-LQCEAILSEPFFLLCHRDSALAVED 181 + L + E +R G +D + P D + ++ +EP L C D +A D Sbjct: 121 EVRLRQGGSGDLAEQVRAGRLDLAFAVRPARCPDGVLVHSLDTEPLVLACAGDHPMAERD 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V + L V G+R ++D LA G++ + E+ +L +VA G+GI++ Sbjct: 181 RVDPRELGEQPFVDFHPDWGTRDVVDRVLAETGVERRVALEVTDVHSLLELVACGLGIAL 240 Query: 242 LPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 +P G V +P + + + + STAA AL V++ Sbjct: 241 VPRS-FSAKNGQVRFVPLASPAPTWETVAIT--SDPTSTAAAALLRDVQEASR 290 >UniRef50_Q7W9G9 Probable LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W9G9_BORPA Length = 296 Score = 296 bits (760), Expect = 6e-79, Method: Composition-based stats. Identities = 76/297 (25%), Positives = 127/297 (42%), Gaps = 5/297 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ FV VA++ F+RA R+G+ Q +S +++LE G LL R R V LT+A Sbjct: 1 MELRHLRYFVAVAEDLHFTRAAARLGIGQPPLSLQIQQLEREIGTPLLLRQPRGVALTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAH-LIPQCIAESHRRYPD 121 G + +L + R+G G + V + + H +P I RYP Sbjct: 61 GARFLQDARAVLHAAELAVETARRLGHGEQGDIAVGFTASAVFHPYLPSAIRAYRDRYPG 120 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGP-VGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ L + + ++ +R G+VD V P + E +L EP + D L + Sbjct: 121 VRIALSESNARALLAGLRSGEVDVAFVRPPYALDDEFASERVLDEPMLVALPPDHPLCRK 180 Query: 181 DYVPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 VP AL VL +G I A R G ++QE A++ +VAAG+G Sbjct: 181 RTVPVAALAEQDFVLYPRPIGAGLYDAIMQACQRAGFTPRVIQEAPQMASIISLVAAGVG 240 Query: 239 ISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 I+++PA + + L + R+ S A +++R + + Sbjct: 241 IAVVPAAMRHMGAAGIVYRPIRGDAPRALLDMAYRRQ-PRSAAVRHAVELLRGRAHP 296 >UniRef50_D1WWA8 Transcriptional regulator, LysR family n=7 Tax=Streptomyces RepID=D1WWA8_9ACTO Length = 310 Score = 296 bits (760), Expect = 6e-79, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 117/278 (42%), Gaps = 3/278 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ F+ VA+E F RA R+ ++Q +S +++LE GV+L R TR V LT A Sbjct: 1 MELRHLRAFLAVAEELHFGRAARRLQMAQPPLSQRIRQLEKELGVQLFHRNTRSVRLTGA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + +LD+L++ +R G+ G+V + + S +P+ +P + Sbjct: 61 GETFLDPVRTVLDDLDTAVRAARSAGRGEYGRVTIGFAGASSHETLPRLTRAVRAAHPGL 120 Query: 123 QFVLHDRPQQWV-MESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + V+ + V + + G +D G V P ++ I E D LA + Sbjct: 121 ELVMTGQTYANVALSRVADGSLDLGFVRLPVSRPGVEHRVIDEEELLCALPSDHPLARHE 180 Query: 182 YVPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 V L V S R + A G +VQE T+ +VAAG+G+ Sbjct: 181 AVSLADLADEPFVSFPANTGSTVRDALTEACESAGFTPRVVQEAPDSYTIMALVAAGVGV 240 Query: 240 SILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRS 277 ++ + + + P + RQ L R + Sbjct: 241 TLTVTSVRHIQQSGLVYRPLTGPPIRRQAALAWRADNP 278 >UniRef50_B5JQV8 LysR substrate binding domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQV8_9BACT Length = 300 Score = 296 bits (759), Expect = 7e-79, Method: Composition-based stats. Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 2/295 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L QL+ F+ VA+ +F+RA E+ +SQ ++S + +LE G +L +R R LT A Sbjct: 1 MELHQLRYFLAVAEAGNFTRAAEKCFVSQPSLSAQIIKLEGELGQKLFNRLGRRAELTRA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L R +L E+ + R + + G V+V + +++ +LIP I RYP++ Sbjct: 61 GTFLESRARTILMEVENAERQIKENEEDIRGIVKVGVTPSVTPYLIPPVIRMCRERYPNL 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + ++ +++ ++QG ++ I G ++ E IL E L + LA + Sbjct: 121 EINIQENLRRRLIDEVQQGHLEVAISSYTGDAANIDAEPILQEDLVLAVSKTHRLATQKS 180 Query: 183 -VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V + + LVL ++ + + I+ +V ++ MV G+G++I Sbjct: 181 KVSIEDFKDEPLVLLGESATLGDKVFDFFDKMNIEPKVVALCSQVRSVKEMVNLGLGVAI 240 Query: 242 LPALALPLPEG-SPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 LPA+A + ++ ++R L + R LS A D++R+ A Sbjct: 241 LPAMAKEEHLPFEIVYRSLVSERMKRLLFALTHSRRYLSPGARVFVDLIREVAYA 295 >UniRef50_A8RPQ8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RPQ8_9CLOT Length = 296 Score = 296 bits (759), Expect = 7e-79, Method: Composition-based stats. Identities = 65/298 (21%), Positives = 136/298 (45%), Gaps = 4/298 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + + LK+FVTV + S + A ++ ++Q ++S ++ E+E++ GV+L DR +R++ LT+ Sbjct: 1 MTFRHLKIFVTVCETGSMTAAASQLFIAQPSISLAISEMEDYYGVKLFDRISRKLYLTEN 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G++ ++D L+ + + G+++V S TI +L+P I + ++YP + Sbjct: 61 GRRALQYARHIIDLLDEMEQGVRDVDAM--GRLKVGTSITIGTYLLPGYIKKLKQQYPAL 118 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + I D+D GI+ + E+ + +C A + Sbjct: 119 KVEASIANSGTIEQQILDNDIDVGIIEGVAHSPFILSESFAGDRLVFICPAGHEFAGKTL 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 ++ +L++ S R + D LA + + + + V AG+GISIL Sbjct: 179 EELSEVRNQDFILREKGSAGREIFDGILAAQELNVRPIWQSASNQVILQGVKAGLGISIL 238 Query: 243 PALALP--LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 P + + EG + + R+ ++ KN+ L +A L ++ ++ A Sbjct: 239 PYFLVRQDIREGELAEFRIKDLALNRKYSVIYHKNKFLPRSARTLMELCKEGNGADRP 296 >UniRef50_Q1LN85 Transcriptional regulator, LysR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LN85_RALME Length = 307 Score = 296 bits (759), Expect = 8e-79, Method: Composition-based stats. Identities = 80/305 (26%), Positives = 134/305 (43%), Gaps = 3/305 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M + +QL+V VA+ S RA E + L+ AVS +KE E G+ L DR R + LT Sbjct: 1 MQITFRQLRVVSEVARYSSVIRAAEALHLTAPAVSLQIKEAERQVGLTLFDRAGRRMTLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ + RLL L R + SG++ + +++ +PQ +A+ H +P Sbjct: 61 TTGEYFLVYARRLLATLKDAEDMMARFKRLESGRLTIGMVG-AASYFLPQLLAKFHAEHP 119 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + L ++ + ++ DVD I+ P + E S P L+ A Sbjct: 120 AVDVRLRLASREKLGVMMQGNDVDLCIMGRPPQDPPTRAEPFASHPHVLVVSPQHRFARA 179 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + VP AL ++++ SG+R + L + IQ V E+ + V AG+G+S Sbjct: 180 EAVPAVALANEPFIVREPDSGTREALQKYLDAHRIQPTFVMEMPSNEAIKQAVMAGMGVS 239 Query: 241 ILPALALPLPEGSPLVVKR--ITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 +L + L + L+ +ER+ +V + LS AAEA V + G + +A Sbjct: 240 LLSLHTIALEWSNGLIAVPHVEGLPLERRWNVVNIAAKQLSPAAEAFRYFVLEHGESHLA 299 Query: 299 GREGD 303 Sbjct: 300 AMMSH 304 >UniRef50_Q0AZ61 Transcriptional regulator, LysR family n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZ61_SYNWW Length = 295 Score = 296 bits (759), Expect = 8e-79, Method: Composition-based stats. Identities = 69/297 (23%), Positives = 132/297 (44%), Gaps = 7/297 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L K +V V + K+ S+ E GLSQ AV+ ++ LE++ GV LL+R R + T Sbjct: 1 MNLNL--FKTYVRVVETKNLSKTAEEFGLSQPAVTKQIQSLEDYYGVLLLERAGRRLKPT 58 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+ L ++ L T + + G + + AS +++P I + +P Sbjct: 59 EAGETLYQYAREIIKLLEKTDNIMETVVESKKGILYLGASTIPGQYILPDYIKKFSDSFP 118 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I L + + + + + ++D G+V ++ L + L+ + L Sbjct: 119 YINISLDIGDTEKIFKKVAERELDIGLVGGWLSNRKVEGFQWLQDELLLIVPENHHLMGR 178 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGI---QANIVQEIGHPATLFPMVAAGI 237 D V + L K + ++ SG+R + L +GI ++ E G + V +G+ Sbjct: 179 DEVRIEELLHEKWIFREKGSGTRKAAEELLNNHGIKKEDLHVGMEAGSTEAVLASVESGM 238 Query: 238 GISILPALALPLPEG--SPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 GISI+ A+ + +K P R ++ + +S A E+ D ++++ Sbjct: 239 GISIVSNWAIKKADPHRRIRSLKIDDPGATRFFYIIYPRQKSRRKAVESFLDFIKEE 295 >UniRef50_Q1ATU8 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ATU8_RUBXD Length = 301 Score = 295 bits (758), Expect = 9e-79, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 120/296 (40%), Gaps = 5/296 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ FV VA+E F RA R+ + Q +S ++ LE G +L RT R V LT+A Sbjct: 1 MELRHLRYFVAVAEELHFGRAARRLHIVQPTLSAQIQRLEAELGAQLFHRTKRSVRLTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + L+ +R+ RM +G++ V + + ++ + RRYP + Sbjct: 61 GKAFLVEARLALEHSERAVREARRMAASETGRLDVGFVPSATYSVLTDVVGLYRRRYPGV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPV--GDLQCEAILSEPFFLLCHRDSALAVE 180 V + +E++ +G ++ G + P +L+ + E + R LA Sbjct: 121 DLVPREMHSSVQVEALLEGSIEVGFLRLPSDHESDELEVRPFVREQLVAVLPRGHRLASL 180 Query: 181 DYVPWQALQGAKLVL--QDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 VP +AL G ++ ++ G + G + QE + A G Sbjct: 181 RRVPLEALAGESFLIPRREREPGYHEQLLEVCGTAGFVPKVAQETTELQVGMALTATGGY 240 Query: 239 ISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 + + PA + + + PV E +L + + LS A A + + Sbjct: 241 VGLFPASTRHVKMTGVVFKRLAEPVPEMELSVAWQSGE-LSPATRAFLGICEEVSG 295 >UniRef50_A0JW92 Transcriptional regulator, LysR family n=3 Tax=Micrococcaceae RepID=A0JW92_ARTS2 Length = 306 Score = 295 bits (758), Expect = 9e-79, Method: Composition-based stats. Identities = 71/299 (23%), Positives = 133/299 (44%), Gaps = 3/299 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + LK F+ VA+E+ F RA R+ ++Q +S +++LE G L+ RTTR+V LT A Sbjct: 1 METRHLKYFIAVAEERHFGRAAARLHMAQPPLSQQIRQLEEQLGTPLMVRTTRKVELTPA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ L R LL EL D ++G+ +G +RV + T + L+P + + R P + Sbjct: 61 GQVLLDRGRVLLQELQVLESDVQQVGEGATGVLRVGFTGTATYRLMPIIVQAARRTLPGL 120 Query: 123 QFVLH-DRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + + + + ++ +G +D ++ P G + + + + DS LA + Sbjct: 121 RITVQGEMLTPQMEAALEEGRLDAAVLRPPVHSGAIALKLLEQDQLVAALPADSPLAEKG 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + AL + S + A + G Q +VQE +TL +VA+G+GI++ Sbjct: 181 TLELAALSEEGFIGYPGYSAVSSIFVDACRKAGFQPRVVQEAKETSTLLSLVASGMGIAL 240 Query: 242 LPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 +P + + + + + L + ++ + A D+ G+ Sbjct: 241 VP-MTSRMFSYQGVAFRPLRNPPPMDLAVAWNSDKE-TPLLRAFLDLFDSLPAKQPPGK 297 >UniRef50_A6UMN5 Transcriptional regulator, LysR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UMN5_SINMW Length = 296 Score = 295 bits (758), Expect = 9e-79, Method: Composition-based stats. Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 3/295 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + L+ +V VA+E F RA +R+ +SQ ++ +++LE GV L +RT R+V LT A Sbjct: 1 MEHRLLQSYVAVAEELHFGRAAKRLNISQPPLTKQIQQLERELGVALFERTKRKVELTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L RLL + + + + +G + V L+P + R YP + Sbjct: 61 GSVLLEEARRLLRQTENAAELVRKTERGETGHLAVGFIDAAIYSLVPNVVECFTRSYPHV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L D + + +G +D G + P L E +L EP + + LA Sbjct: 121 TVELADLRIPDQVRGVSEGRLDVGFIHPPIRGEQLAIETVLVEPLVVAVPQRHRLASRAE 180 Query: 183 VPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 +P L L+ I +G IV+E T+ +V+ G+G+S Sbjct: 181 IPLAELANEALIQFPRSINPTLYDEIIGLCQSSGFNPKIVREATPKQTIIGLVSVGLGVS 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 +LP L P + ++ R +R L A +A +VVR Sbjct: 241 LLPRCLENLKRDGVAYRPISGPNLSIDTSIIYRSDR-LRPATKAFINVVRTVARE 294 >UniRef50_D1VD43 Transcriptional regulator, LysR family n=1 Tax=Frankia sp. EuI1c RepID=D1VD43_9ACTO Length = 361 Score = 295 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 69/298 (23%), Positives = 126/298 (42%), Gaps = 5/298 (1%) Query: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 L+QL FV VA+ K F+RA R+ ++Q ++S ++ LE G L +R + LT AG+ Sbjct: 21 LQQLAYFVAVAETKHFTRAAARVHVAQPSLSAQIRALETELGSPLFNRARGNITLTAAGE 80 Query: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 L ++L + + R+ + G VRV A+ ++ ++P+ + +RYP IQ Sbjct: 81 ALLPLARKILADADMARREVQELTDLRRGTVRVGATPSLCTGMLPEVLRLFRQRYPGIQL 140 Query: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGP--VGDLQCEAILSEPFFLLCHRDSALAVE-D 181 ++ + + ++ + G +D ++I P L +L E ++ D V Sbjct: 141 LVEEGGSRDLVGELAVGALDLALIILPLQGSDPALATAPLLREDLVVISSPDGPPPVRTA 200 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + + L+ LV+ R A G + E G + V AG+GI++ Sbjct: 201 QMAVEDLRDRPLVMFRRGYDLRDFTVGACRAAGFEPTFAIEGGEMDAVCGFVMAGLGIAV 260 Query: 242 LPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 +P++ P + R + L R++ AA L + D A Sbjct: 261 IPSMVA--FRQPLRTTPFAAPGLHRTIGLAHRRDVEPPRAARELRATLVDFVANAAAA 316 >UniRef50_C7RSN5 Transcriptional regulator, LysR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RSN5_9PROT Length = 300 Score = 295 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 84/297 (28%), Positives = 138/297 (46%), Gaps = 4/297 (1%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 ++L+VF VA+ SF++AGE + ++Q AV+ +K+LE RL DR + LT AG+ Sbjct: 4 RRLQVFHAVAKHLSFTKAGEALHMTQPAVTFQIKQLEERFNTRLFDRGGGRIALTQAGEL 63 Query: 66 LALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFV 125 + ER+L M Q+SG + V AS TI+ ++P + E + RYP ++ Sbjct: 64 VLDYAERILGLSADLDLRVAEMTGQMSGSLLVGASTTIAEFMLPPILGEFNVRYPQVRAR 123 Query: 126 LHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPW 185 L + + +I +D G+V LQCE + ++C LA V Sbjct: 124 LTVANSEAISNAIAAHTLDIGLVESLVNHPSLQCEVCGDDELQVICTPTHPLAQRTDVDA 183 Query: 186 QALQGAKLVLQDYASGSRPLIDAALARNGIQA---NIVQEIGHPATLFPMVAAGIGISIL 242 ++L + ++ SG+R + D L G++ + E+ P L +VA G+G SI+ Sbjct: 184 RSLMAHDFIAREPGSGTREVTDDYLRACGVEPAQIKTLMELASPEALKGVVATGLGFSIV 243 Query: 243 PALALPLPEGSP-LVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 + LV + P ++R L LV +K R S D R++ L A Sbjct: 244 SRASFEKERQLGSLVAIPLRPRLKRTLSLVYQKERFRSKVVLTFVDFARNKLRELSA 300 >UniRef50_Q7WNC1 LysR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WNC1_BORBR Length = 297 Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 74/298 (24%), Positives = 127/298 (42%), Gaps = 3/298 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L+ + FVT+A+E +F+RA R + Q+ +S ++K LE G+ LL R TR V LT A Sbjct: 1 MNLRHVHYFVTLAEELNFTRAAARCHIEQAPLSRAIKALERELGLTLLIRNTRNVELTPA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L+EL R R + G++ +A + L+P I R YP + Sbjct: 61 GRLFCDCARVALEELELGARRARRAQEGAIGQLTIAHVGSTVYELLPSIIRAFKRGYPLV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + + GD+D G V G L + +EPF LA + Sbjct: 121 DLRIRQLTTREQIPGLIAGDIDVGFVRVAPDSGQLAAARLYAEPFVCAIPDWHPLAGRES 180 Query: 183 VPWQALQGAKLV--LQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V L + + ++ A + + G + I QE+ + +VA+GIG++ Sbjct: 181 VALGELASSPFIMLMRSPAPSLHQQVLDLCRKAGFEPRIAQEVEQIESTVGLVASGIGVA 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 ++PA L S V + ++ + + ++ S A+A RD A Sbjct: 241 LVPASLRKLSIRSVCYVPLCDVAEQVEVWVAWPREQA-SPVAQAFLQCARDTLPDPRA 297 >UniRef50_B8IJK2 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IJK2_METNO Length = 306 Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 73/303 (24%), Positives = 133/303 (43%), Gaps = 3/303 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ FV +A+++ F RA E + ++Q +S +K LE+ V L DR+TR + LT A Sbjct: 1 MDLRHLRYFVVLAEQRHFGRAAELLNMAQPPLSQQIKALEDELEVTLFDRSTRPIELTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L ++L ++ T R GQ G + + + + + +P + R+PDI Sbjct: 61 GRTLLREARQILHHVSRAQAATRRAGQGQDGHLVIGVTGSAAMEFLPPVLLAFRARWPDI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L + + ++ +G++ G V P L + +PF + D A + Sbjct: 121 RLSLREMSSPEQIAALERGEIHIGFVRPPVLDDRLNVRLVHQDPFVVALPGDHPQAGVEG 180 Query: 183 VPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V L G L++ D A G R LI G ++ T+ +V+AG+G + Sbjct: 181 VRLADLNGTALIIFDPAEAPGFRDLIIHVCRTAGYVPETLESAPQMTTMLALVSAGLGFA 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 ++P A L + + P +L V +++++ AE L V+ + A Sbjct: 241 LVPRSARRLALERVVFRPLLDPCAAVELYAVWSRDKAV-RLAEELVSVIDEARYAAPGPS 299 Query: 301 EGD 303 Sbjct: 300 VPA 302 >UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellular organisms RepID=C9YBM2_9BURK Length = 309 Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 72/297 (24%), Positives = 126/297 (42%), Gaps = 4/297 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M +QL+ FV VA+E F +A R+ +SQ +S +++LE GV L +RT R V LT Sbjct: 11 MRLETRQLRYFVAVAEELHFGKAAVRLHMSQPPLSQQIRQLEEGLGVTLFERTQRSVKLT 70 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AGQ + L +L + + +G +R + + +IP + +RYP Sbjct: 71 YAGQVFLAQARNALSKLEEAVDVVRAAARGEAGFLRCGYTAASAYAVIPSVMHAFKQRYP 130 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ L + IR+G +D G+V G + DL E ++ E + + LA + Sbjct: 131 LVEVALRESLSGDQYRDIREGRLDIGLVRPFGALPDLATEKLIEENLIVAIPSEHPLAQQ 190 Query: 181 DYVPWQALQGAKLVLQDY-AS-GSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 V LQ V S +++ L + +VQ P + +V+AG+G Sbjct: 191 RIVDIHDLQSQPFVGFSSYGSQYFHDMVENLLGGEKVVPKLVQRATQPHAVIALVSAGLG 250 Query: 239 ISILPALALPLPEGSPLVVKRITPVVER-QLMLVRRKNRSLSTAAEALWDVVRDQGN 294 ++I+P + + + + R +L L R+ +S R+ Sbjct: 251 LAIVPDASARVHMDRVVYRPLHASRLPRPELHLCWRREN-ISPLISNFKASAREVAA 306 >UniRef50_Q46PT5 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46PT5_RALEJ Length = 300 Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 93/298 (31%), Positives = 154/298 (51%), Gaps = 2/298 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+ FV VA+ F+ A ++ L+QSA S ++ELE+ G++L+DR+TR LT Sbjct: 1 MNVTLRQLRAFVEVARSGGFTAAAPKLHLTQSATSLQIRELESQLGLQLIDRSTRRFALT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 DAG + + R++ ++ ++ DT + + G++ VA + +++ L+P+ IA YP Sbjct: 61 DAGSEFLISAMRIVGDVEQSVADTRELVHKRRGRITVATTPLLASTLLPESIAHFLDAYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I + D P + + + GDVDFG + P +L P ++ LA Sbjct: 121 AITVRIADLPAEQIGRRVLSGDVDFGFGVFPEEDPQFDRIPLLRHPLGVMVPSSWPLATR 180 Query: 181 DY-VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 + W L+G L+ +A+G R LID L + G+Q N E+ + T + AG+G+ Sbjct: 181 KRDLVWSDLEGQPLIAMSHATGMRTLIDQQLHQAGVQVNPRFEVAYLGTAVGLAEAGLGV 240 Query: 240 SILPALALPLP-EGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 +++PA L PVV RQ+ L+ R RSLS +A A D + + L Sbjct: 241 TVVPAYVGKLMGSDRVRFRPLHKPVVHRQIELIVRAGRSLSPSAAAFRDCLAARCKML 298 >UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillaceae RepID=C0Z518_BREBN Length = 295 Score = 295 bits (756), Expect = 1e-78, Method: Composition-based stats. Identities = 68/290 (23%), Positives = 122/290 (42%), Gaps = 6/290 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L L F VA+ SF+RA E +G +Q V+ +++LE G L +R R++ LT A Sbjct: 1 MELVYLHTFREVARYGSFTRAAEELGYAQPTVTAQMQKLEQSYGAPLFERYGRKLRLTQA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L L+ + Q +G + + T++A +P + ++YP + Sbjct: 61 GEALLPYARELIRLYGESKEVI---KHQTTGPIAIGTIDTLAAFFLPPYLQAFCQQYPQV 117 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVI-DPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 VL + +++ IR G +DFGI+ P +L I E ++ Sbjct: 118 DLVLRTAGEAEIVQQIRDGYLDFGIIFDRPCTDPELVTHVIREEELVVVMPPAHRFTTAT 177 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + L G LVL + R ++ A G+ I + +P + V G+G+++ Sbjct: 178 ALTVHDLGGEPLVLTEEGCTYRGMLLEAFGEAGMTQRIACQFSNPEAIKQCVRCGLGVAL 237 Query: 242 LPALALPLPEGSPL--VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 LP +A+ + + + + LV K + LS + L D + Sbjct: 238 LPVMAVQRELAEGVLTAIPFQSDKPPFSIQLVYHKKKWLSPSMVTLVDTI 287 >UniRef50_C4V4C8 Transcriptional regulator n=2 Tax=Selenomonas RepID=C4V4C8_9FIRM Length = 298 Score = 295 bits (756), Expect = 1e-78, Method: Composition-based stats. Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 2/289 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ F ++ K+ +RA ER+ +SQ ++ ++K+LE+ G++L DR+ +++ LT Sbjct: 1 MELRQLEYFQMASRLKNITRAAERLRVSQPNITVAIKKLESELGIQLFDRSQKQLSLTPE 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G R+E L + + + Q G +++ + A+L P+ + RRY + Sbjct: 61 GAVFLERVEVALRNIQDAVLEVNDYKQLQKGTIKIGIPPMMGAYLFPKIFSSFQRRYSHL 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 LH+ + E + + ++DFGI+I P +LQ + DS LA Sbjct: 121 DVYLHEEGSVAIREQLERDELDFGIIIIPESSPNLQLLPMTRSQIVCCVPEDSELAERKA 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V Q ++G L++ S R + + G+ NIV E T+ +VA+G+G + L Sbjct: 181 VTLQDIEGRNLIMLKEGSFLRQTMLQKMKAAGVSPNIVLESNQVVTIMGLVASGVGDAFL 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 + G + P V + L +++R +S AA++ D RD Sbjct: 241 LDMIAREAHG-IRTLPLAAP-VYVDVGLAWKRDRYISRAAQSFIDFARD 287 >UniRef50_A0K8T5 Transcriptional regulator, LysR family n=55 Tax=Proteobacteria RepID=A0K8T5_BURCH Length = 308 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 77/299 (25%), Positives = 132/299 (44%), Gaps = 5/299 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ FV VA+E F RA +R+ +SQ A+S +++ E+ GV+L RT + V LT+A Sbjct: 9 VELRQLRYFVAVAEELHFGRAAKRLFISQPALSFDIRKFEDALGVQLFSRTNKTVALTNA 68 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L RLL + + R T R L+G++R+ ++ +P + YP + Sbjct: 69 GEVLLGEARRLLLQADEAERLTVRSASGLAGRLRIGFVHSMLYRGLPDAVRRFEADYPGV 128 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + VL + +++I++G +D G +++ A+ +EPF LA Sbjct: 129 EVVLSEMNTHAQVQAIQRGQIDLGYAHWGHFPPEVESVAVYAEPFVCCLPAAHPLARRRQ 188 Query: 183 VPWQALQGAKLVLQDYASG--SRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V L +L + LI A G I E T+ M+ G+GI+ Sbjct: 189 VALATLATEPFILFPRDAAPHYHDLIIAQCVNAGFSPLIRHEARLWQTILSMIEFGMGIA 248 Query: 241 ILPALALPLPEGSPLVVKRITPVVE-RQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 ++P + + +E R L L +++ + A VR +AL A Sbjct: 249 LVPRVLQQAKSDRLAFLPLKDASLESRTLAL--KRSGTAEPVALRFAGYVRASIDALPA 305 >UniRef50_C9RA29 Transcriptional regulator, LysR family n=1 Tax=Ammonifex degensii KC4 RepID=C9RA29_AMMDK Length = 295 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 77/295 (26%), Positives = 133/295 (45%), Gaps = 5/295 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L LK FV +A + SFS A + + L+Q AVS + LE H GV+L+DR R+V LT+A Sbjct: 1 MKLSWLKTFVLIADKGSFSLAAKELDLTQPAVSKHIALLEAHLGVKLIDRDQRQVTLTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ L ++ L + + + G + + AS +++PQ I RYP + Sbjct: 61 GQALLPYARTIIKTLEEAEQAVRNLSASVRGTLNIGASTIPGHYVLPQLIRRFRERYPQV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 Q L + V + + + + G V P L+ ++ L+ LA ++ Sbjct: 121 QVNLEIADTEKVWQQVLEHKICLGAVGAPPSSPALEAVPFATDEIVLVLPTPHPLAGKEV 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQA---NIVQEIGHPATLFPMVAAGIGI 239 +P + L +LV ++ SG+R ++ L + G +V E + V AG+G Sbjct: 181 IPLELLPQLELVGREKGSGTRQTVEERLRQKGFPPERLRVVAEFSTTEAVLAAVEAGLGG 240 Query: 240 SILPALALP--LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 + + A +G+ + + ER+L LV ++R+L A + +Q Sbjct: 241 AFVSRWAAESRRHKGNLCICRLEGISFERKLYLVYSRHRTLPHLARLFLNFATNQ 295 >UniRef50_Q0EX23 Transcriptional Regulator, LysR family protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EX23_9PROT Length = 303 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 73/289 (25%), Positives = 135/289 (46%), Gaps = 3/289 (1%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +L+QL++F VA+ SF+RA E I L+Q A+S VK LE G L ++ +++ LT AG Sbjct: 5 TLQQLRLFEAVARFGSFTRAAEAIHLTQPAISIQVKRLEETLGAPLFEQMGKKIYLTAAG 64 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 ++L + D L + + +++G + +AA T + + +P + RRYP + Sbjct: 65 KELYATCRHVFDSLGTFEGKLDELRGEVAGPLNLAAVTT-AKYFLPHYLGAFLRRYPKVL 123 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 L + + E + + D I+ D++ L + + H LA + + Sbjct: 124 PQLKVSNRARITERMEANEDDIYILATLPERIDIEVHPFLKDELVVFAHPKHPLANKKKI 183 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 P + L G +++ ++ SG R + LA G+ E+G + V +GIGI+ L Sbjct: 184 PPELLLGERIISREAGSGIRMTFERLLAERGVTLEPYMELGSGEAIKQAVMSGIGIATLS 243 Query: 244 ALA--LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 + L L G +V+ + R V R+ + L+ +A + ++ Sbjct: 244 TFSLKLELETGRLVVLDVEGMPIRRNWYAVHRRGKHLTPSALKFIEFLQ 292 >UniRef50_C3LMU4 Transcriptional regulator, LysR family n=65 Tax=Gammaproteobacteria RepID=C3LMU4_VIBCM Length = 296 Score = 294 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 68/291 (23%), Positives = 127/291 (43%), Gaps = 2/291 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++QL+ FVTVA+ +SF+ A +++ ++Q A+S S+K+ E GV L R R+V LT Sbjct: 8 MEVRQLRHFVTVAEWESFTLAAQQLHIAQPALSISIKKFEQQLGVTLFKRDERKVALTHE 67 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L +R+L ++N + + G+VR+ A + ++ PQ I +P++ Sbjct: 68 GEVLLEHAKRILQQVNDAQLAVDELKGVVKGEVRLGAPSMMGSYFFPQIIMAFKSHFPNL 127 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + Q + + G++D G++++ DL + +LS + ++ LA + Sbjct: 128 KMTVIEAGTQSIRRMLLSGELDIGVILNHDLPDDLAADPLLSSQMVAVVGKNHELAERRH 187 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + +LV+ R ID + A+ E + +V I+ L Sbjct: 188 LTFAEFFEHELVMFKPGYFHRDFIDKVCREHKFTADFSFETNLLPMILSIVKHEYAITAL 247 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQG 293 L + P V L L RK LS A + V+ Sbjct: 248 LELVTSNEPE--VKAIPFEPPVWLDLALAWRKEGYLSNADRTFIEFVKKYV 296 >UniRef50_Q2J7C4 Transcriptional regulator, LysR family n=22 Tax=Actinomycetales RepID=Q2J7C4_FRASC Length = 316 Score = 294 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 67/302 (22%), Positives = 128/302 (42%), Gaps = 5/302 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L QL FV VA+ + F+RA +R+ ++Q ++S ++ LE G L +R + LT A Sbjct: 1 MQLHQLAYFVAVAETRHFTRAAQRVHVAQPSLSQQIRALEQELGTPLFNRARGNISLTPA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L R+L + + + + G VR+ A+ ++ +P + H+RYP I Sbjct: 61 GETLLPLARRILTDTETARQRVTELLDLRHGTVRLGATPSLCTGFLPDVLRLFHQRYPGI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGP--VGDLQCEAILSEPFFLLCHRDS-ALAV 179 + ++ + + ++ + G +D ++I P L ++ E L+ D + Sbjct: 121 RLLVEEGGSRDLVRDLAAGSLDLALIILPLQSSDPALATSPLIRESLVLVSSLDEPPIVA 180 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 + L+ +V+ R A G + E G + VAAG+G Sbjct: 181 GRPLTVADLRNHPMVMFRRGYDLREATVTACREAGFEPIFAIEGGEMDAVLGFVAAGLGS 240 Query: 240 SILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 +++P+ V + P ++R + L RR++ + AA L V+ + A Sbjct: 241 AVIPSTVAHRL--GMRVTPFVLPGLQRTIGLARRRDVEPTRAAVELQRVLWEYLRDAAAS 298 Query: 300 RE 301 Sbjct: 299 GN 300 >UniRef50_A3ZYQ6 Transcriptional regulator, LysR family protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZYQ6_9PLAN Length = 293 Score = 294 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 71/289 (24%), Positives = 133/289 (46%), Gaps = 2/289 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L L +F VA+ S S E++ +SQ A S +++ E G +L DRT R + LT Sbjct: 1 MNLHHLAIFHEVAETGSVSLGAEQLMISQPAASKQLRDFETALGEKLFDRTGRGLRLTTV 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L ++ R + G++ + AS TI+ +L+PQ +A H+++P+I Sbjct: 61 GKLLNEYARKIFTLEAEAERVVALVRDVRRGELFLGASTTIAGYLLPQVLARFHQQHPEI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + +V + VD G+ L + + ++ L + Sbjct: 121 RVHVSVGNTDFVHRQVLDYRVDLGLTEGFVNEPGLTATSFAEDELVVVAAATHPLVKKRR 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V L G VL++ SG+R + + A++ G++ V + + +VAAG+G++I+ Sbjct: 181 VKADDLSGQSFVLRESGSGTRAVQEQAISMCGVEVREVMTLSSTEAIKHVVAAGVGLAIV 240 Query: 243 PALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 L++ L G ++ + R L LV+ ++R S AA A + + Sbjct: 241 SRLSVGAELVSGELCAIRLADLQIPRPLHLVQAQDRFASPAARAFHEAL 289 >UniRef50_C9PFK4 Transcriptional regulator substrate-binding of LysR family protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PFK4_VIBFU Length = 304 Score = 294 bits (754), Expect = 2e-78, Method: Composition-based stats. Identities = 63/290 (21%), Positives = 125/290 (43%), Gaps = 2/290 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 LK+L+ FV +A +F++ +++ ++QSA+S S+++LE G++L++RT R++ LT Sbjct: 1 MELKRLQYFVALAANGNFTKTADQLNIAQSALSVSMQKLEKEIGLKLINRTNRQIQLTSD 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G +L R+L+++ + + GK+ S + ++ P+ +A YP+I Sbjct: 61 GMRLLFHARRILEDVALAEIEMDELKGLERGKIDFGVSAMLGSYFFPEALAAFTETYPNI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + + + + +G +D V P+ L+ A+ E ++ A Sbjct: 121 RIHIQEHGTATLEKMLLEGALDLAFVRTDQPLEQLRYVALCPEEIVACVNKSHPFAQRSE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V + L+L R I N I +I E + ++ IGIS Sbjct: 181 VSLEQFCQQPLILFRDGYLLREAISRYCRNNNITPDIRYETNLIELVKALLKKDIGISTC 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 + E V P ++ + + + + LS AA A + D Sbjct: 241 LRRIIHDNEPLVCV--PFNPPIKVEFGIGWKSSHYLSNAARAFLKFMEDW 288 >UniRef50_Q7W708 Putative LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W708_BORPA Length = 298 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 77/273 (28%), Positives = 125/273 (45%), Gaps = 2/273 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 LKQ++ FV VA+E+SFSRA ER+ +SQ +S +K LE L R R + LT A Sbjct: 1 MDLKQMRYFVAVAEERSFSRAAERLHISQPPLSQQIKALEEELNAPLFHRLPRGISLTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L +L + ++T ++ + G VR+ + AHL+P + + R P Sbjct: 61 GAALLKSSRAILANVRLAAQETTQIAAGMLGTVRMGTVSSALAHLVPYILTQVKRSMPGS 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L + + ++ + ++D G+V P DL+ IL EPF+ LA + Sbjct: 121 KVELTEMSSREQTLAVLRDELDIGLVHTPIDTADLRTRQILREPFYAAVPSQHPLASREA 180 Query: 183 VPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 VP L + V ASG + + G I H +T+ MVA G+G++ Sbjct: 181 VPVAELASEEFVFFPRTLASGLFDKMVSLCMNAGFSPKIHHTARHQSTMLQMVAMGLGVT 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRR 273 I+P + +GS + + +L L+ R Sbjct: 241 IVPRSLQRIYKGSAVFLPLTGTPHYLELSLIWR 273 >UniRef50_A0R3Z8 Transcriptional regulator, LysR family protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R3Z8_MYCS2 Length = 289 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 63/287 (21%), Positives = 120/287 (41%), Gaps = 3/287 (1%) Query: 6 KQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQ 65 + L+ FV +A+E F RA +R+ ++Q A+S ++ +E G +L RT R V LT+AGQ Sbjct: 2 RHLRCFVVLAEELHFGRAAQRLHVAQPALSQLIQRVERELGAQLFLRTRRTVSLTEAGQT 61 Query: 66 LALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFV 125 L R+L + + + + + +G V + + + ++P+ +A R +P + Sbjct: 62 LLPEARRILRDADRVTQAVRAVHRGETGSVTIGFVGSAADDVLPRLVAAHRRHHPGVSIR 121 Query: 126 LHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPW 185 L + +E +R + G+ P + + E L AL+ + Sbjct: 122 LEEGTTAQQLEWLRDQRITVGLGRTPIDDPAVSTVVLARESLVLAVPDSHALSGAESAEL 181 Query: 186 QALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 L ++ G +I +A A G ++V E T+ +V+ G+G++++P Sbjct: 182 AGLAEEPFIMFPRHLGPGLYDIIHSACAAAGFTPSVVYETVRMQTIVGLVSGGLGVALVP 241 Query: 244 ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 L V +L ++ R N S + L R Sbjct: 242 ESVRNLGRKGVRYVHLADAPPAIELSMMWR-NDCESPHLQPLRKTAR 287 >UniRef50_Q06610 RuBisCO operon transcriptional regulator n=4 Tax=Proteobacteria RepID=RBCR_THIFE Length = 309 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 3/288 (1%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +L QLK+F VA+ SF+RA E + L+ A+S V++L G L D+ +++ LT AG Sbjct: 7 TLHQLKIFAAVARHMSFARAAEELHLTPPALSIQVRQLAEAVGQPLFDQIGKKIYLTAAG 66 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 + L +LD L ++ + G ++VA T + + IP+ + +P + Sbjct: 67 EALTSACHDILDRLEYFTQEIAALQGLEKGSLKVATLST-TKYFIPRMLGGFCTEHPGVA 125 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 VL ++ ++E + + D I+ P ++ EA P ++ D L E + Sbjct: 126 TVLFIGNREVLLERLARNQDDLYILGQPPEHMNVVAEAFADNPLVVVARLDHPLTQEKDI 185 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 L+ +L++ SG+R + ++G+ E G + VA G+GI++L Sbjct: 186 EPSRLRDVPFILREPGSGTRLAAEKFFEQHGVILKTRMEFGSNEAVKQSVAGGLGITVLS 245 Query: 244 ALA--LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 A L G ++ +ER+ V + +S +A + + Sbjct: 246 ASTIRAELASGKLAILDVRGFPLERKWYAVYPAGKRISPRTKAFMEYL 293 >UniRef50_C0CUF5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUF5_9CLOT Length = 302 Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats. Identities = 70/300 (23%), Positives = 139/300 (46%), Gaps = 4/300 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ +L+ L++F+TV + S + A R+ +Q +VS +++E+E + GV+L DR ++++ LT Sbjct: 1 MDVTLRHLRIFLTVCEAGSMTGAANRLFTAQPSVSLAIREMEEYYGVKLFDRISKKLFLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG Q+ ++ + ++ +SG +RV AS T+ L+P + E R YP Sbjct: 61 EAGHQVLEYARHIIALFDEMEQEVRNPD--MSGTLRVGASITVGTFLLPGYVKELTRLYP 118 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +++ + + + ++D G++ + E+ + +C A + Sbjct: 119 ELRVEARIENSNNIEKCVLSNEIDLGVIEGIAHSRYISSESFHGDRLAFVCPPGHRFAGK 178 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V LQ +L++ S R + D A + + I + + VAAG G+S Sbjct: 179 QDVKLGDLQSESFILREKGSAGREIFDGLAAAHELDIRIAWQSTSNQAIIHGVAAGFGLS 238 Query: 241 ILPALALP--LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 +LPA + GS +ER+ ++ KN+ L+ A L + ++ G + Sbjct: 239 VLPASLAAEGVERGSIAEFSVEGLSMERKFCVIYHKNKFLARGARELIRLFKEGGERKLP 298 >UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRM1_ACIBL Length = 302 Score = 293 bits (752), Expect = 4e-78, Method: Composition-based stats. Identities = 69/292 (23%), Positives = 136/292 (46%), Gaps = 3/292 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 QL F+ VA+ +FSRAGE++ SQSAVS +++LE G RL DR+ + V L+ A Sbjct: 1 MDFDQLLTFLEVAKLGNFSRAGEKVYRSQSAVSAQIRQLEQEYGERLFDRSGKIVRLSPA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L +R++ N +LR G+ G + + A++ +++P E +++P + Sbjct: 61 GEVLLEYAQRMVALRNESLRAVADQGETPRGVLSIGANEATCLYVLPDIFTEYCQQFPQV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 Q ++ + +++++ G +D GI P L+ I + L+ LA ++ Sbjct: 121 QITVYRNFSRKILQAVEDGVIDLGIATLPVKSPSLKVHPIFRDRLELMVPVRHPLAAKES 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V + + + +R +D + + EI + V +G+G+++L Sbjct: 181 VTIEEIAEYPQIFPKTGY-TRQQLDKLFRPYNSKLRVAMEIPSVGLIKSFVVSGVGVTLL 239 Query: 243 PALALPLPEGSPLV--VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 + + + + R+L L+ R +R+L +A A D++R + Sbjct: 240 SSTFAQDEVRAGKAKMLPIAGVDMWRELGLIYRNDRTLPRSATAFIDLMRHR 291 >UniRef50_B9XBB1 Transcriptional regulator, LysR family n=2 Tax=Verrucomicrobiales RepID=B9XBB1_9BACT Length = 299 Score = 293 bits (752), Expect = 4e-78, Method: Composition-based stats. Identities = 59/288 (20%), Positives = 116/288 (40%), Gaps = 3/288 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ ++ FV VA+E SF RA ER+ L+Q +S +K+LE G +L +RTTR V LT + Sbjct: 1 MELRHIRYFVAVAEELSFRRAAERLHLAQPPLSAQIKDLEGELGTKLFERTTRSVRLTAS 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ +L + + L G +R+ + + + ++P + Sbjct: 61 GRVFLDEARAVLAAAEKAEQRVRKAEHGLVGTLRIGVLAPTATSRLATILRSYRNQFPGV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 QF LH+ ++S+R +D G++ P +L + P L LA + Sbjct: 121 QFSLHEMTSVEQLQSLRLDQLDVGLLRPPVAFPELDFHFLEESPMVLAVPAGHRLAKQRL 180 Query: 183 VPWQALQGAKLVLQDYA--SGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W+ +V+ + G A+ G + Q + +++AG G++ Sbjct: 181 IEWKDFHNEPMVMIHPSLQHGYYDTFLNLCAKAGSTPIVGQYANDVHSKMWLISAGFGVA 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDV 288 + + + + Q ++V ++ + S + Sbjct: 241 PTTKTIAEVKRPGLVFRELPPGLPLVQTLIVWKRTNN-SPMVGNFIEC 287 >UniRef50_Q3SFM8 Transcriptional regulator n=3 Tax=Proteobacteria RepID=Q3SFM8_THIDA Length = 313 Score = 293 bits (752), Expect = 5e-78, Method: Composition-based stats. Identities = 77/288 (26%), Positives = 128/288 (44%), Gaps = 2/288 (0%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 + +QL++F +A+ SF+RA E + L+Q VS +K+L + G L++ + + LT G Sbjct: 6 TFRQLEIFEAIARLGSFTRASEELYLTQPTVSMQMKKLSENVGAPLIEHIGKRIHLTADG 65 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 QQLA + L+ GK+ + A T +++ P+ + E + YP I Sbjct: 66 QQLAQATREIFAILDRFTMSVAERRGLKQGKLSLMAITT-ASYFAPRLLGEFAKLYPGID 124 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 L ++ V+ SI D + P D+ I+ P +L D LA + Sbjct: 125 VSLRVTNKEQVLASIADNLDDLYFLGQPPEDIDVIATPIMDNPIVVLAAPDHPLAHTRKI 184 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 P + L ++++ SG+R I+ A +GI + E+G + + AG+GIS L Sbjct: 185 PLEQLAKESWLMREKGSGTRNAIERRFAESGIAVHPRLELGSNEAIKQAILAGLGISALS 244 Query: 244 ALALPLPEGS-PLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 AL L + V+ + R V R LS AA A D + Sbjct: 245 RHALALNQPDQFAVLDVDGFPILRHWYAVYPAGRQLSVAARAFLDYLL 292 >UniRef50_Q4KHB2 Transcriptional regulator, LysR family n=28 Tax=Proteobacteria RepID=Q4KHB2_PSEF5 Length = 308 Score = 293 bits (752), Expect = 5e-78, Method: Composition-based stats. Identities = 77/293 (26%), Positives = 135/293 (46%), Gaps = 4/293 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M ++L+QL+VFV VAQ++S SRA + LSQSA S S+ ELE + +L DR + + L Sbjct: 1 MRFTLRQLQVFVAVAQQESVSRAAGLLSLSQSAASTSITELERQSSCQLFDRAGKRLSLN 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+QL + LLD+ G + V A+ TI +L I + +P Sbjct: 61 ALGKQLLPQAVALLDQAKEIEDLLNGKSG--FGSLSVGATLTIGNYLATLLIGSFMQVHP 118 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + Q LH + +++ + ++D G++ D++ + + + + C LA Sbjct: 119 ESQVKLHVQNTAHIVQQVAHYEIDLGLIEGDCSHPDIEVQTWVEDELVVFCAPQHPLAKR 178 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + + L +L++ SG+R D A+ + NI E+ H + V +G+GI Sbjct: 179 GHATMEELTHEAWILREQGSGTRLTFDQAMRHHRSALNIRLELEHTEAIKRAVESGLGIG 238 Query: 241 ILPALALPLPEGSPLVVKRITPVVE--RQLMLVRRKNRSLSTAAEALWDVVRD 291 + LAL +V TP ++ RQ + K + ++A ++ R Sbjct: 239 CISRLALRDAFRRGSLVPVETPGLDLARQFYFIWHKQKYQTSAMREFLELCRA 291 >UniRef50_C1BAS4 Putative LysR family transcriptional regulator n=2 Tax=Actinomycetales RepID=C1BAS4_RHOOB Length = 299 Score = 293 bits (752), Expect = 5e-78, Method: Composition-based stats. Identities = 72/289 (24%), Positives = 119/289 (41%), Gaps = 2/289 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ FVTVA+E +F RA ER+ ++Q A+S + + E L +RTTR V LTDA Sbjct: 1 MELRQLRYFVTVAEEMNFRRAAERLHIAQPALSQQISKFEKELRTTLFERTTRRVELTDA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L R+L E + L ++ G +R+ + + ++P + + +P + Sbjct: 61 GRVLLDEGRRVLAEADHALAAVEQVAHGEVGLLRIGFVSSAALRIVPATVLALQKEWPGV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 Q L + + +I G +D G+V + + + EP + H A Sbjct: 121 QVELSESTTDRQLSAIADGILDIGLVREVDRAEGIVVRPLTREPLLVAMHSSHPFAGRAS 180 Query: 183 VPWQALQGAKLVLQDYA--SGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V L+ + + S I A G + QE TL +VAA G++ Sbjct: 181 VRLVELRDERFLTFPRGQVSRLYDHIAALCHHAGFRLEAAQEAVQFPTLLGLVAANTGVT 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 ++PA L V + + R +R A DV Sbjct: 241 VVPASLRALHLPDLRYVALSDAQAVSTVSVAYRADRQQIPAIRHFLDVA 289 >UniRef50_C2BX95 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2BX95_LISGR Length = 297 Score = 293 bits (751), Expect = 6e-78, Method: Composition-based stats. Identities = 65/290 (22%), Positives = 122/290 (42%), Gaps = 2/290 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QLK F+ VA + ++A E + ++QSAVS + +LE G++L DR R + LT Sbjct: 1 MELRQLKYFMEVASFEHMTQASENLHVAQSAVSRQITKLEEELGIKLFDRVGRNMQLTTV 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ +++ +EL G VR+ ++++ ++P I+ YPD+ Sbjct: 61 GEDFLNQVKVAYNELLKAEAIVTEYSDPTKGSVRIGLPNSLASKVLPAVISAFRAEYPDV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVID-PGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + + + + + G++D + P ++ E ++ LA Sbjct: 121 TYHFVEGSNAELKQLLLDGEIDITFLSPVPVTDDSVEAVKFFDEKLKVIFPATHPLADRY 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V + L K +L ++ A + I +I + T+ +V AG+GISI Sbjct: 181 NVSLEELAAEKFILYPPNFDLFKIVTTAAEKKAISLDIAFQSQDFYTIQGLVGAGLGISI 240 Query: 242 LPALALPLPE-GSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 LP + L + + R + LV K R LS + + ++ Sbjct: 241 LPEMILDGTIFKDTKALPLRNKELRRSVGLVVTKKRQLSPTEKLFYQFIK 290 >UniRef50_C1ZI46 Transcriptional regulator, COG0583 n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZI46_PLALI Length = 292 Score = 293 bits (751), Expect = 6e-78, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 125/291 (42%), Gaps = 3/291 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L QL+ F+ A+ KSF+ A +SQ ++S + +LE G L +R+ R V LT++ Sbjct: 1 MELHQLRYFLKAAELKSFTLAAAECFISQPSLSQQIIKLEQELGQPLFERSGRGVELTES 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L R +++ ++ R+ +G++ + A TI+ +L+PQ ++ P + Sbjct: 61 GKLLQSRAGQIVSLVDQARREITD--DGETGQLTIGAIPTIAPYLLPQIVSRFREVVPRV 118 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 +H+ + ++ ++ G+ D I P + L+ E + E +L L+ Sbjct: 119 TLKIHEDVTEQCLKKVQAGEWDLAIAALPVRIEHLEVEPLFDEELWLAVPPGHRLSHLTE 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 VP + + L+L A + R + + T+ +V+ G G+S + Sbjct: 179 VPVEEIDRETLLLLGEAHCLTEHVAQYCRRKDMAPLETGRLAQLTTIMELVSRGQGVSFI 238 Query: 243 PALALPLPEGSPLVVKRI-TPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 P + + + +R + LV R + + DV+R + Sbjct: 239 PNMCKAFDREGRCAYRPLQGDRPQRTIALVWNSYRFQTLLLKRALDVIRRE 289 >UniRef50_C6DBU7 Transcriptional regulator, LysR family n=4 Tax=Pectobacterium RepID=C6DBU7_PECCP Length = 299 Score = 293 bits (751), Expect = 7e-78, Method: Composition-based stats. Identities = 77/300 (25%), Positives = 132/300 (44%), Gaps = 3/300 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN S+KQL+ F+ + + +F+RA ++I LSQ A S + LE G RL DR TR+V L Sbjct: 1 MNLSIKQLRAFIALTETDNFTRAAQKINLSQPAFSSLIAGLEEEVGYRLFDRDTRKVQLN 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G RL+ + + + GK+ +A +++ +PQ +A+ HR YP Sbjct: 61 ADGLHFIDIARRLVQTHDDAVGEIKSYATGYKGKIVLAVLPSMAVEWLPQVLAQYHRAYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ L D ++++ G D + G + ++ F+L+C LA Sbjct: 121 KIKVELLDTQWDRCLKAVLDGRADLALTAGQPSPGTFSSRMLFADSFYLICQNSHPLAQR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 D V + V + R D + G N V E+ T+ +VAA G+S Sbjct: 181 DSVDVTDVAQYPFVGFCKGTSIRQYTDQLIEPEGF--NYVLEVRQLTTMMGLVAANYGVS 238 Query: 241 ILPALAL-PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 I+ L L ++ ++R + LV + R LS A+ +D + ++ + + Sbjct: 239 IVTGLTLFQFQHKDIAIIPFRDLSLQRGIYLVTDRERQLSVCAKEFYDFLLERAESFVPA 298 >UniRef50_C6J497 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J497_9BACL Length = 306 Score = 292 bits (750), Expect = 8e-78, Method: Composition-based stats. Identities = 67/307 (21%), Positives = 124/307 (40%), Gaps = 8/307 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + L+ F+ V ++ F++A ER+G++Q +SH ++ LE G L+ R ++ LT A Sbjct: 1 MEHRLLEYFIAVGEDLHFTKAAERLGITQPTLSHQIRLLEQELGTALIQRIGKKNYLTQA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L R++ E+ + G++ G++R+ S HL+ + HR+YP I Sbjct: 61 GSILLEHARRVIYEVEQAKLEIGQITGVQRGQLRIGCS---GNHLLEDKLISFHRQYPGI 117 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + + + +D G+V P + + E L+ A A Sbjct: 118 ELTVLELATEETRAGLLANQLDLGVVFLPLQDEHIVSRPLFDEALVLVVSSQHAYAELPE 177 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V + + LVL R L+D A A GI+ V E+ + MV +G ++L Sbjct: 178 VTLEQVAQLPLVLFPPKFYVRQLLDTACAEQGIEIRPVMELSTMESQVQMVIHHVGGTVL 237 Query: 243 PALALPL-----PEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALM 297 P + PV + + LV R++ + +A + ++ Sbjct: 238 PGSYARTLTSTNRRSGITFIPLAEPVPHKNVGLVYRRSTFMDPTLQAFIRHLTEEDEEDT 297 Query: 298 AGREGDP 304 P Sbjct: 298 QAPVSAP 304 >UniRef50_C7I0K1 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I0K1_THIIN Length = 319 Score = 292 bits (750), Expect = 8e-78, Method: Composition-based stats. Identities = 66/303 (21%), Positives = 134/303 (44%), Gaps = 3/303 (0%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N +++QL+VF A+ F +A + + L+ AVS ++ELE+ G+ L +R + V LT Sbjct: 3 NATIRQLRVFSAAARHLHFGKAAQEMHLTPPAVSMQIRELESQVGLPLFERQGKSVSLTL 62 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 G+ L + ++L L R+ +G++ + T + + +P+ +A H YP Sbjct: 63 TGEYLVVYARKVLATLKDAEDAMARLRGIKAGRLTIGMVST-AQYFVPRLLARFHAEYPH 121 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 ++ L ++ ++ ++ ++D I+ P + E + P ++ L+ Sbjct: 122 VEVRLSVGNREQLVSHLQNSELDLAIMGRPPRDVATRAEPFAAHPMGIIAPPQHPLSTGG 181 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 L ++++ SG+R + L ++ ++ + E+ T+ V A +GIS Sbjct: 182 PHSATLLTQFNFIIREPGSGTRATFEEYLHQHQMELPLFTEMQSNETIKQAVMANMGISF 241 Query: 242 LPALALPLP-EGSPLVVK-RITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 L + L + L V + R+ V + LS AEA + + G + +A Sbjct: 242 LSLHTIDLELRNNLLTVPSIEGMPLLRRWYAVNSLAKLLSPGAEAFRYFILEHGESFLAE 301 Query: 300 REG 302 G Sbjct: 302 TFG 304 >UniRef50_Q1IX51 Transcriptional regulator, LysR family n=3 Tax=Deinococcus RepID=Q1IX51_DEIGD Length = 297 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 71/295 (24%), Positives = 124/295 (42%), Gaps = 4/295 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ FV +A+E+ F RA ER+ + Q A+S+S+K LE+ GV L+ RTTR V LT A Sbjct: 1 MELRHLRHFVALAEEEHFGRAAERVFVVQQALSNSIKNLEDEVGVPLVLRTTRRVQLTPA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G++ L + + R + G++ V ++ +P+ + YP++ Sbjct: 61 GREFLAGARETLAQAAQMVERARRAARGEVGRLTVGFVSGLAFGGLPEIVRAFRDLYPNV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + Q +R G +D G+++ P L + +P ALA + Sbjct: 121 SVDLRELTAQEQEAGLRGGQIDVGLMLLPVRDPGLDSHPLWRQPLVAALPAGHALARKRR 180 Query: 183 VPWQALQGAKLVLQDYA--SGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + L+ + V + + G N+VQE TL +VAAGIG+ Sbjct: 181 LRIGDLRDERFVFFPRHLRATYFDQVMRWCGAAGFTPNVVQEAIEIPTLLSLVAAGIGV- 239 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSL-STAAEALWDVVRDQGN 294 LP +V + + +++ V R++ + A V + Sbjct: 240 FLPIQFFERLSLPGVVYRPLDDAPVIEIVAVWRRDEAEGGPIVRAFLRVAQAALE 294 >UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67SW7_SYMTH Length = 305 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 75/296 (25%), Positives = 135/296 (45%), Gaps = 4/296 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++ L+ F +A+ SF+RA ER+ L+Q +V+ ++ LE G +L +R R V LTDA Sbjct: 1 MDVQGLEAFWWIAKTGSFNRAAERLFLTQPSVTARIQALEKELGQQLFERRPRGVRLTDA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L ER+L ++ + + G + V ++ T SA+L+P + R YP++ Sbjct: 61 GRALLPHAERVLQDIKRARQAVLDLQTASGGTLSVGSALTTSAYLLPDILLRFKRGYPNV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDP-GPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + ++H V + + V G+V P ++ + EP L+ D +A Sbjct: 121 EVLVHTGRSHQVQQLVLDDTVQVGLVHAPLPSHAEIVSYPLSEEPILLVVPPDHPVARHS 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V L + D ASG L++ A G +I E+ MV G+G+++ Sbjct: 181 EVTLDELTQESFITTDRASGYWALVEQWWASQGFVPHITMELDSIEAAKRMVLCGLGLTM 240 Query: 242 LPALAL--PLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 LP + + + V ++RQ +L+ R+ + S A+A V+ + Sbjct: 241 LPYSTVKSEIELSQVVAVPLANSATLKRQNILIHRRGKIWSGTAKAFLRVLEEMFQ 296 >UniRef50_C6D9U9 Transcriptional regulator, LysR family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6D9U9_PECCP Length = 294 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 65/294 (22%), Positives = 125/294 (42%), Gaps = 6/294 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + ++ F+ VA+E F+RA R+ + Q +S ++ LE GV L +RT R V LT+A Sbjct: 1 MEFRHIRYFIAVAEELHFTRAAVRLNIGQPPLSQQIQSLEAELGVLLFERTRRSVRLTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQT-ISAHLIPQCIAESHRRYPD 121 GQ +R +L+ + R+ + +G+++++ + T + + + +YP+ Sbjct: 61 GQHFLIRAREILESSEGVASELQRISRGEAGELKISFTSTGLLVEELRTPLRTFRAKYPE 120 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVI--DPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 ++ L + ++ G++D G V P L I ++ L+ D LA Sbjct: 121 VRLTLKEMFTHLQFAALLAGELDIGCVRFNGPRAPDGLTLRWIRNDRLCLVLPDDHPLAG 180 Query: 180 EDYVPWQALQGAKLVLQD--YASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGI 237 V ++ + + + + G N+ QE T +VAAG+ Sbjct: 181 RTDVGIVEVRDEPFIGYPAKAGASVSDYVTMCCEQAGFIPNVTQEAREAMTQIGLVAAGM 240 Query: 238 GISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 G++ILP L + + ++ LV R++ + S D+VR Sbjct: 241 GVAILPQPMDQLQPKGVCFIPLSDAGAQLRMALVTRESDN-SPRVRNFVDLVRQ 293 >UniRef50_UPI0001694914 Transcriptional Regulator, LysR family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001694914 Length = 299 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 67/289 (23%), Positives = 122/289 (42%), Gaps = 4/289 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ FVTVA+E +F RA R+ ++Q +S +++LE G LL RT + V LT+A Sbjct: 1 MELRHLRYFVTVAEELNFGRAAARLNITQPPLSQQIRQLEQELGFPLLFRTKQRVELTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L ++ TL R +G++ +A + + ++P + R+P + Sbjct: 61 GKVFLEEARITLAHIDKTLDSARRAHLGAAGRLDIAFVGSATYRIVP-LLQSYRMRFPSV 119 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 VLH ++++ + + GI+ P L I E F + L E+ Sbjct: 120 SLVLHQMKTANQLQALHESQIHLGIIRSPVQSPLLASTVIYRERFLVALPHTHPLTRENQ 179 Query: 183 VPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + Q L+ +L S + ++G I E T+ V+AG+GI+ Sbjct: 180 LRIQDLEHQDFILPSRSNGSMYHEAVIRLCFQSGFYPKIALEAPEILTIVAFVSAGMGIA 239 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 ++PA + + +++V RKN S + + Sbjct: 240 LVPASFQNQQNIGVVYRELENVGTMLDMVMVWRKNEK-SQVLKQFLQHI 287 >UniRef50_A8FAC2 Possible LysR family transcriptional regulator n=21 Tax=Bacillus RepID=A8FAC2_BACP2 Length = 329 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 72/293 (24%), Positives = 131/293 (44%), Gaps = 5/293 (1%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 L+Q++ F+ VA+E +FSRA ER+ ++Q +S +++LE GV L RT R+V L+D Sbjct: 32 KMDLRQIRYFIMVAEELNFSRAAERLKMAQPPLSQEIRKLEEQLGVTLFHRTRRQVELSD 91 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 +G+ R L +++ T++ T G + + + ++ I +P+ Sbjct: 92 SGRVFLEEARRTLLQVDRTIKATQLADDGKIGHLTIGFVDS--TDMVIDIIKRFRESFPN 149 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 I VL + + ++++ + ++ G + L E E L+ + LA Sbjct: 150 IHLVLCEMATEQQLKALHKKEIQIGFIRSNQNNKILTSEICCEESLSLVLPENHPLASFP 209 Query: 182 YVPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 VP L ++ + LI + N I N+VQE T+ +VAAG+GI Sbjct: 210 KVPIHLLANEPFIMFPRHLGAAFYDLIISYFWENNISLNVVQEAVQMHTIVNLVAAGMGI 269 Query: 240 SILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 S++P+ + + K L + R + + ST A+ VVR+ Sbjct: 270 SVVPSSVESVKRSGVVYRKIQETTPRVNLYVSWRHDET-STVAQHFLTVVREA 321 >UniRef50_C0Z4V5 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z4V5_BREBN Length = 298 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 75/288 (26%), Positives = 134/288 (46%), Gaps = 1/288 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++QL+ FV V + K+F++A + + +SQ ++S +K LE V LLDRT R++ LTDA Sbjct: 1 MDIRQLQYFVEVVKHKNFTKAAQSLHVSQPSISKMIKALEEELEVVLLDRTERKMDLTDA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + ++L + + G+V++ T+ + L+P IA ++YP I Sbjct: 61 GEMVYSYATKVLQLMEGMASSIAELRNVERGRVKLGMMPTVGSFLLPNVIALFKKQYPGI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + + + QG +D + + P + +L+E + HR+ LA D Sbjct: 121 DIEMKEYSAKLLEIQMEQGSIDVALTVLPMDQEKFEAVPLLAEDLVAIVHREHWLAGVDE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V + L+ +L ++ A +G + N+ + MVA +GIS++ Sbjct: 181 VSLEQLKDEAFILFTEEYAMHDVVRHACKLSGFEPNVAYMSSLWDFVGEMVATQLGISLI 240 Query: 243 PALAL-PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 P + L G V PV++ Q L+ RK LS A +A V Sbjct: 241 PRSIVRRLNNGQLHTVNISYPVIDWQYALIYRKEGYLSHATKAFISFV 288 >UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHG4_MOOTA Length = 302 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 85/296 (28%), Positives = 146/296 (49%), Gaps = 7/296 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++ L F+T ++ + S A E + L+Q AVS ++ LE++ G+RLL+R REV LT A Sbjct: 1 MNINHLITFITTVEKGTLSAAAEELHLTQPAVSKQLQALEDYFGLRLLERRGREVRLTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + LN T R+ + Q + G++ + AS T +++P+ I R YP + Sbjct: 61 GEICYRHARIIASHLNQTRRELAELTQLVRGRLLLGASTTPGQYILPRLIGAFRREYPRV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDF-GIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + +L Q V++ +++G++D + G +L + + L+ LA Sbjct: 121 EVILTIADTQEVVQRLQEGEIDLGVVGAAGGRGKNLSYSRLAGDELVLIVPPGHRLAGAT 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQA---NIVQEIGHPATLFPMVAAGIG 238 + L+ LV ++ SG+R +++ LA G IV E+G + V AG+G Sbjct: 181 AISPGELKEEPLVWRESGSGTRRVVEERLAAAGFTVDPEQIVMELGSTEAIVSAVEAGLG 240 Query: 239 ISILPALALP--LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 IS++ + A+ + G VV ++R L LVRR+ LS AAEA + D Sbjct: 241 ISLVTSWAVEKSVKLGRLAVVTLQGVDLKRDLYLVRRRQ-PLSPAAEAFVNFAADH 295 >UniRef50_A1VNR0 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A1VNR0_POLNA Length = 305 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 70/296 (23%), Positives = 133/296 (44%), Gaps = 3/296 (1%) Query: 4 SLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAG 63 +LKQ++ FV VA+++S S+A ER+ ++Q AVS +++LE+ G+ L++ R + LT AG Sbjct: 7 TLKQMQTFVEVARQRSVSKAAERLFVTQPAVSMQIRQLEDAFGLPLIEPLGRNIQLTHAG 66 Query: 64 QQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQ 123 + L + G++ +A T + + +P + + +P I Sbjct: 67 EAFLGHAIAALGQFKDLEALMAEHVGMKKGRIDLAVVST-AKYFVPMLLVRFRKLHPGID 125 Query: 124 FVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYV 183 L ++ ++ + + + D ++ D + + P ++ D AL + Sbjct: 126 IQLRIDNRENILGMMARYEADLVVMGRAPGNLDCEATPFATNPLSIVAAPDHALVRRKTL 185 Query: 184 PWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILP 243 P+ AL V+++ SG+R ++ A N+V E+ T+ V AG+G+S L Sbjct: 186 PFSALGEHGFVVREQGSGTRAAMERLFADQKTPLNVVMEMPSNETIKQAVMAGMGLSFLS 245 Query: 244 ALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALM 297 + L G +V + + + LS AA A + + +QG ALM Sbjct: 246 RRTMRHELAHGYIALVDIEGTPLVGNWYITHLSQKKLSPAALAFKEFLVEQGGALM 301 >UniRef50_B5ELK2 Transcriptional regulator, LysR family n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ELK2_ACIF5 Length = 308 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 70/309 (22%), Positives = 129/309 (41%), Gaps = 9/309 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ L+ L+ F+ VA++ FSRA ER+G+SQ +S + LE G RLL RT R V LT Sbjct: 1 MSLELRHLRYFIAVAEDLHFSRAAERLGISQPPLSQQIHTLEEMLGARLLVRTNRRVALT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAH-LIPQCIAESHRRY 119 DAG+ +L +++ + + + G++ + +++ +P+ I + Sbjct: 61 DAGEAFLKEARAILVQVDRAVDYVRSVERGEKGELHIGMTRSAMLAKQVPRAIFRFRTEF 120 Query: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 P + L + ++++ + GI+ LQ + ++P + Sbjct: 121 PSVHLGLEELNSLEQIDALIHEKIQVGIMRVQHLPAMLQSHMLYADPLVAVLPAKHPFCP 180 Query: 180 ED-----YVPWQALQGAKLVLQ--DYASGSRPLIDAALARNGIQANIVQEIGHPATLFPM 232 + L + ++ +G R G IVQE+ +T+ + Sbjct: 181 ISPTLSVPLDPAQLVHEQFIIFADSAGTGIRNQFYQICHDAGFNPRIVQEVQEASTMIGL 240 Query: 233 VAAGIGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 VAAG+GI+ILP L + S + +P + +V R R S L +++ + Sbjct: 241 VAAGLGITILPVSYSYLQQDSVCYIPLSSPSARSDIHVVYRC-RDHSPLLRQLLTILKSE 299 Query: 293 GNALMAGRE 301 A R Sbjct: 300 AAAHAVSRR 308 >UniRef50_C4ZHT7 Transcription activator of glutamate synthase(LysR family) n=6 Tax=Clostridiales RepID=C4ZHT7_EUBR3 Length = 293 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 71/294 (24%), Positives = 133/294 (45%), Gaps = 3/294 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L QL+ F +AQE+ ++RA + + ++Q ++SH++ +LE G RL ++ R VVLT Sbjct: 1 MNLSQLQYFKVLAQEEHYTRAAQMLSITQPSLSHAISQLEQELGTRLFEKKGRNVVLTRY 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP-- 120 G+ +E L LN ++ + G + +A T+ + P+ + + YP Sbjct: 61 GKMFLPYVEESLKVLNEGVQRIQEVNGSRHGIIHLAYIYTMGSEFAPKLVRKFLDAYPDY 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 DI+F +++ ++ D D+ + I ++ L D L+++ Sbjct: 121 DIEFHFTVGTTGEIIDGLKDDKYDIVFSSYKDGEQDIDFKKIANQKLVLAVPMDHPLSIK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 D V + + + SG RP+ID G + E+ +++ +VA G GI+ Sbjct: 181 DSVDLRDTIEYPQIYFEKGSGLRPVIDQMFEEIGQFPKVAFEMEEDSSMAGLVAQGFGIA 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 ++P + + L S + P ER + L K R LS A+A V ++ Sbjct: 241 VMPDIPI-LRSLSVKTLDIYNPPYERAVYLATLKQRYLSPVAKAFIRFVIEETA 293 >UniRef50_A6SUU1 OxyR hydrogen peroxide-inducible genes activator n=125 Tax=cellular organisms RepID=A6SUU1_JANMA Length = 331 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 82/314 (26%), Positives = 142/314 (45%), Gaps = 9/314 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L +LK V VA+EK F A E ++Q +S ++K+LE+ GV L +R E+ +T Sbjct: 17 MTLTELKYIVAVAREKHFGHAAEACFVAQPTLSVAIKKLEDELGVTLFERGGSEISMTPL 76 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G Q+ + ER+L++ + + L G R+ TI+ +L+P + R P + Sbjct: 77 GAQIVAQAERVLEQTAAIKEIAKQNKDPLVGPFRLGIIYTIAPYLLPPLVKTIIERVPQM 136 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 VL + ++E +RQG++D IV P P L + + EPF + + A D Sbjct: 137 PLVLQENFTVKLLELLRQGELDAAIVALPFPDQGLLVQPVYDEPFVVAVPKHHKWANRDS 196 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAAL------ARNGIQANIVQEIGHPATLFPMVAAG 236 V L+ ++L R + + +G E T+ MVA+G Sbjct: 197 VSTDDLKSETMLLLGNGHCFRDQVLEVCPEMSRFSTSGDGIARTFEGSSLETIRHMVASG 256 Query: 237 IGISILPALALPLPE---GSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQG 293 IGI++LP ++P + G + P R+++LV RK+ + A EA+ + Sbjct: 257 IGITVLPQASIPDMQAKDGMLRYIPFTQPGPSRRVVLVWRKSFTRGAAIEAVRQALLSCD 316 Query: 294 NALMAGREGDPLYQ 307 + +PL + Sbjct: 317 LHGVTMLPDEPLSE 330 >UniRef50_B8FI63 Transcriptional regulator, LysR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FI63_DESAA Length = 304 Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 78/300 (26%), Positives = 134/300 (44%), Gaps = 5/300 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L QL +F V + SFS+A + + LSQ VS +K+LE+H RL+DR R+ T Sbjct: 1 MDLWQLHIFTKVVELGSFSKAAQAVNLSQPTVSSHIKDLEDHLNCRLIDRLGRKASPTKG 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L RLL + + +G + +A S +++P+ I + YPD+ Sbjct: 61 GELLYSFATRLLALRDEAQSAMSSFLGKPTGSLAIAGSNIPGCYVLPKVIGAFSKYYPDV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + V E + G V+ G+V P L + ++ + L+ LA ++ Sbjct: 121 SISLKIGDTRSVSEDVIAGTVEMGVVGALSPNKQLTQDKLMDDHLTLIVPASHPLAEKEA 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGI---QANIVQEIGHPATLFPMVAAGIGI 239 V +++ A ++++ SG+R + LA GI NI ++G + + AG+G+ Sbjct: 181 VSIKSIADAPFIIREQGSGTRKFFEKVLADAGIGLDSLNISGQLGSTEAVREAIKAGLGV 240 Query: 240 SILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALM 297 SI A+ L GS ++ R LVR + R+ S + D + + L Sbjct: 241 SIFSTRAVLGDLRCGSLKSIEISDLDFRRSFYLVRHRQRTASPLCQYFCDFLTANAHDLA 300 >UniRef50_Q1YDL8 Transcriptional regulator, LysR family n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YDL8_MOBAS Length = 302 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 71/303 (23%), Positives = 126/303 (41%), Gaps = 4/303 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + L+ FV VA+E F RA R+ ++Q A++ +++LE LL+R R V LT A Sbjct: 2 VETRLLRSFVCVAEELHFGRAARRLHIAQPALTRQIQQLEERLQATLLNRNQRIVTLTPA 61 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ R R+L +L ++ R+ G++ V + + + P + +P + Sbjct: 62 GRMFLERSYRILADLEQAAKEVRRVEAGQEGRLSVGFIHSSTYGVTPLVLRRFRLAFPRV 121 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + Q + ++R G +D GI+ P L+ + E F + D LA D Sbjct: 122 DLELFEMTIQEQLAALRDGQIDVGILRPPISDPSLRARPLREERFVVALPHDHRLAATDR 181 Query: 183 VPWQALQGAKLVLQ--DYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + + L +L + I + G + Q T+ +V+AG+G++ Sbjct: 182 LHLRDLSEDGFILFTQRKSPLFYARIIGMCEKAGFVPRVEQYATQIHTMIGLVSAGMGVA 241 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 I+P +A L V+ Q+ L R + + S A D + L A Sbjct: 242 IVPEVARSLNIPGVAYVEIADTPPTVQVCLGWRASDT-SPILAAFCDHA-ETSARLAAET 299 Query: 301 EGD 303 G+ Sbjct: 300 AGE 302 >UniRef50_A5W7U4 Transcriptional regulator, LysR family n=17 Tax=Proteobacteria RepID=A5W7U4_PSEP1 Length = 308 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 77/292 (26%), Positives = 133/292 (45%), Gaps = 4/292 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M ++L+Q++VFV VAQ +S SRA + LSQSA S S+ ELE + +L DR + + L Sbjct: 1 MRFTLRQMQVFVAVAQHQSVSRAASLLALSQSAASTSITELERQSSCQLFDRAGKRLALN 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G QL + LLD+ G + V A+ TI +L I + +P Sbjct: 61 ALGHQLLPQAVALLDQAKEIEDLLNGKSG--FGSLAVGATLTIGNYLATLLIGNYMQTHP 118 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + Q LH + +++ + ++D G++ DL+ + + + + C LA Sbjct: 119 ESQVKLHVQNTAHIVQQVAHYEIDLGLIEGDCNHPDLEVQPWVEDELVVFCAPQHPLAKL 178 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 ++L +L++ SG+R D A+ + NI E+ H + V +G+GI Sbjct: 179 GRADIESLSQEAWILREQGSGTRLTFDQAMRHHRANLNIRLELEHTEAIKRAVESGLGIG 238 Query: 241 ILPALALPLPEGSPLVVKRITPVVE--RQLMLVRRKNRSLSTAAEALWDVVR 290 + LAL +V TP ++ RQ + K + ++A ++ R Sbjct: 239 CISRLALRDAFRRGSLVPVETPELDLLRQFYFIWHKQKYQTSAMREFLELCR 290 >UniRef50_UPI0001744D79 transcriptional regulator, LysR family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744D79 Length = 300 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 77/293 (26%), Positives = 135/293 (46%), Gaps = 2/293 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + L VF V ++KSFS AG+ +GL+Q +S +V++LE+ G L DR ++ LT A Sbjct: 1 MESRALAVFAEVVRQKSFSAAGKILGLTQPTISKAVQQLEHDCGCLLFDRQGKKFRLTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + R + +L E + + G++R+ S+ L +A R++P I Sbjct: 61 GEVVYQRAQVILKEHERLRDELAGIHGLERGRLRLGLPSLGSSLLFAPHVASFRRQHPGI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + LH++ + E +R G+++ G+ + P P + + + EP L L E Sbjct: 121 EIELHEQGSLHLQERVRAGEIEVGVSLGPVP-EEFDWQPVSDEPLVALLPAGHPLERETS 179 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L+ VL + +I A + G GH + +VAAG+G+++L Sbjct: 180 LELADLKDTPFVLFEPGFSLNAVILDACRQRGFSPVEAARSGHVDFIIALVAAGLGVALL 239 Query: 243 PALALPLPEGSPL-VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 P L + E VV + +L L+ R+ LS AA +VV++ Sbjct: 240 PRLIVNSREQRVCTVVPLRDEDLRWRLGLIWRRGGDLSPAARRWLEVVQEGSR 292 >UniRef50_UPI000178A8A2 transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A8A2 Length = 300 Score = 290 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 80/296 (27%), Positives = 123/296 (41%), Gaps = 3/296 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 LKQL+ F+ + +E FSRA E++G+S VS ++ LE GV L DR + +VLTDA Sbjct: 1 MELKQLQYFMAICEELHFSRAAEKMGVSAPNVSQQIRRLEAELGVLLFDRVGKTIVLTDA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L + L + Q G + + + + + + H+ YP I Sbjct: 61 GAILHEHAAAVFGHLQQAGDAIADLKQMQGGSLSIGVLPGDADLMFNALLLDFHQTYPTI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + V E + +D G+ I P L + E F L HRD LA E++ Sbjct: 121 SLSLLE--TMKVTEQVLDRSIDIGVTIGPVIDERLTSIPLFHEEFSLAVHRDDPLAGENF 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 +P L+ +V+ R LID NG ++L MV +G+G +L Sbjct: 179 IPLNRLRSMNMVMFPPDHQCRKLIDRFCMDNGFAVQPHMVTTTLSSLLQMVQSGVGACVL 238 Query: 243 PALALP-LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALM 297 P L L L VV P + + L+ R +R + A +R + Sbjct: 239 PRLLLDNLRNTEIKVVHLRNPTPSQDICLIYRSDRFMGYAMRTFIKNLRAYIETAI 294 >UniRef50_P42722 HTH-type transcriptional regulator cfxR n=9 Tax=Betaproteobacteria RepID=CFXR_RALEH Length = 317 Score = 290 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 72/302 (23%), Positives = 133/302 (44%), Gaps = 3/302 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L+QL++FVTVA+ SF RA E + L+Q AVS VK+LE+ G+ L +R ++ LT+ Sbjct: 8 LTLRQLQIFVTVARHASFVRAAEELHLTQPAVSMQVKQLESVVGMALFERVKGQLTLTEP 67 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G +L R+L E+ + G + + T S + P+ +A +P + Sbjct: 68 GDRLLHHASRILGEVKDAEEGLQAVKDVEQGSITIGLIST-SKYFAPKLLAGFTALHPGV 126 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + ++ ++ ++ +D ++ P D E I + P L+ L Sbjct: 127 DLRIAEGNRETLLRLLQDNAIDLALMGRPPRELDAVSEPIAAHPHVLVASPRHPLHDAKG 186 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 Q L+ +L++ SG+R + + + V +G T+ V AG+GIS+L Sbjct: 187 FDLQELRHETFLLREPGSGTRTVAEYMFRDHLFTPAKVITLGSNETIKQAVMAGMGISLL 246 Query: 243 PALA--LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 L L G ++ +ER + ++ LS A+E+ + + + Sbjct: 247 SLHTLGLELRTGEIGLLDVAGTPIERIWHVAHMSSKRLSPASESCRAYLLEHTAEFLGRE 306 Query: 301 EG 302 G Sbjct: 307 YG 308 >UniRef50_B5XVV4 Transcriptional regulator cynR n=5 Tax=Enterobacteriaceae RepID=B5XVV4_KLEP3 Length = 313 Score = 290 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 75/305 (24%), Positives = 145/305 (47%), Gaps = 2/305 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L F+ VA+ + F+RA + +SQ A+S +++LE V+L DR+ R LTDA Sbjct: 1 MLLRHLSYFIAVAEHRGFTRAAAALHVSQPALSQQIRQLEAMLEVQLFDRSGRYTRLTDA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ R+L +L R GK+R+A + T + +++ + +RRYP + Sbjct: 61 GEIWLEYARRVLRDLEEGRRALHDAEDLQRGKLRIAMTPTFTTYVLGPLVEAYYRRYPGV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + ++ + Q+ + + + ++D GI D D+ + +L+E L+ R LA E + Sbjct: 121 KLLIQEMNQERMETMLLEDELDVGIAFDESLSRDIVVQPLLTETLALVVSRAHPLAHESH 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + QAL L+L +R ID R+ ++ ++ E + ++ + ++L Sbjct: 181 LQLQALDAQPLILLSSEFATREQIDRYCRRHRLEPDVRMEANSIGAVLTVIRGTLLATLL 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGREG 302 PA A+ + ++ +++R L++R+ S AA + R+ A + G Sbjct: 241 PA-AIAGQYDDLVAIELKPALLQRTACLLQRQGAWQSAAAREFIALAREIA-ATLEQENG 298 Query: 303 DPLYQ 307 LY+ Sbjct: 299 QALYE 303 >UniRef50_A3VLP1 LysR family transcriptional regulatory protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VLP1_9RHOB Length = 325 Score = 290 bits (743), Expect = 5e-77, Method: Composition-based stats. Identities = 68/294 (23%), Positives = 133/294 (45%), Gaps = 5/294 (1%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 L+QL+ F+ VA+E +F+RA ER+G++Q +S + LE+ G +L R+ R V LT Sbjct: 9 KVELRQLRYFLAVAEELNFTRAAERMGIAQPPLSQQIISLEHQLGAKLFIRSCRRVKLTA 68 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 G +L R+++ + +G++ + + + L+P + +P Sbjct: 69 EGIELQAYARRIINTTMLATESIRSIANGKNGQIALGSVCSAIHSLVPHILPPFAALHPG 128 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 ++ L + + ++ + +D IV +P + + + +EPF +R+S LA + Sbjct: 129 VRVHLQEMTVKEQFRALNEERIDIAIVREPMATTEFATQPLFTEPFVAAVNRNSPLARMN 188 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALA---RNGIQANIVQEIGHPATLFPMVAAGIG 238 + + + LV S +R D + G + N+V E +L +VA+GIG Sbjct: 189 RLSLEQIAREPLVQVYR-SANREYSDHMFSALMEQGYELNVVCEASDMHSLLGLVASGIG 247 Query: 239 ISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 +S++PA + + + + V V L L +L+ + + V D Sbjct: 248 VSLVPASLVNIQTANVIYVPLSDDVQSSTLSLAWNPE-ALTPSMDQFLKSVSDY 300 >UniRef50_C5BEX8 Transcriptional regulator, LysR family n=12 Tax=Enterobacteriaceae RepID=C5BEX8_EDWI9 Length = 312 Score = 289 bits (742), Expect = 7e-77, Method: Composition-based stats. Identities = 67/290 (23%), Positives = 127/290 (43%), Gaps = 2/290 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++ L+ FV V ++ SF+RA E++ ++Q +S ++ LE G LL R R + LTD+ Sbjct: 1 MDVRTLRYFVEVVRQHSFTRAAEKLFVTQPTISKMLRNLEEELGCTLLIREGRGLRLTDS 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G + R + +LD+ + +G G +++ + + I E +RYP I Sbjct: 61 GNVVYQRAQTILDQFGQLRTELDDLGALKKGSLKLGIPPMVGTQ-MAGLIGEFRQRYPGI 119 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVID-PGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + + + V +++ G++D + P + + S P ++L R + Sbjct: 120 ELHIAEFGGLTVEQAVLSGELDLALTALSAQPDPAIASLPLFSHPLYVLLPRQAPWLTRS 179 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + L ++L + + A + G++ I G L MV AG+GI+I Sbjct: 180 ALGMTDLAQQNILLYNEDFALYQQLMQAFSAAGVKPQIAVRSGQWDFLAAMVQAGVGIAI 239 Query: 242 LPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 LP + L+ + P + +L L+ R LS +A+A R+ Sbjct: 240 LPQPICQRLDPHSLLWLPLAPTLMWRLGLIWCHGRYLSHSAQAWIARCRE 289 >UniRef50_A6DK62 Hydrogen peroxide-inducible genes activator n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DK62_9BACT Length = 293 Score = 289 bits (742), Expect = 7e-77, Method: Composition-based stats. Identities = 78/289 (26%), Positives = 140/289 (48%), Gaps = 4/289 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + K L+ F +A+EK F +A + G+SQ A+S +K++E GV L +R+ R+VVL+ Sbjct: 1 MTFKDLEYFAILAKEKHFGQASVQAGVSQPALSIQIKKMEAELGVCLFERSNRQVVLSPE 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L R +++L ++ + G++ + A T++ +L PQ I E H+ YP++ Sbjct: 61 GEVLLERAQKILRQVEDFQTCARQFKDPYQGQLILGAFPTLAPYLFPQIIDELHQSYPEM 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 +F + + + +++ +++G VD + P L E I SE F + + Sbjct: 121 KFFIKEEKTETLLKMLKEGKVDAAFIALPHEDSTLDSEFIFSEEFLFATPANYPEDFPNE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + Q+L+G +L+L D R + N + N TL MVAAG+G++++ Sbjct: 181 LSLQSLKGRELMLLDEGHCFRDQALELCSVNQARENFDFRASSLETLRHMVAAGLGVTLI 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 P A +K P +R++ L RK S AE ++ D Sbjct: 241 PKCA-QDESAKIKYMKFSDPSPKREIALFWRKT---SPKAEIFREIADD 285 >UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3192A Length = 343 Score = 289 bits (742), Expect = 7e-77, Method: Composition-based stats. Identities = 75/282 (26%), Positives = 129/282 (45%), Gaps = 2/282 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ FV VA+E SF+RA R+ ++Q VS V+ LE G +LLDR+ R V T+A Sbjct: 1 MELRQLEYFVAVAEEASFTRAAARLHVAQPGVSAQVRRLEAELGEQLLDRSGRSVRPTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G + L + + + + G+V + + + ++P +A R +PD+ Sbjct: 61 GVAVLPHARAALASVGAVRGAIEELTGLVRGRVAIGMVSSYPSAVLPDLLASFSRLHPDV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIV--IDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + L + ++++++ G++D ++ GP L + + EP LA Sbjct: 121 EITLGEDNSDRLVQALQHGELDLALIGSARTGPPPGLATQTLTDEPLVAAVSHTHPLATR 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + AL G+ L+ +G R +D A A G++ I E P L + A G+G++ Sbjct: 181 STLTVAALAGSPLMCLPRGTGIRTALDDACATAGVEPRIAFEASDPVPLALLAARGLGVA 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAA 282 ILPA G + P ++ L R +S AA Sbjct: 241 ILPASLAAARSGELHAIALTRPQPRGRIELAWRAEGPVSPAA 282 >UniRef50_Q127N6 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q127N6_POLSJ Length = 328 Score = 289 bits (741), Expect = 8e-77, Method: Composition-based stats. Identities = 84/294 (28%), Positives = 138/294 (46%), Gaps = 1/294 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+ FV VA+ SF+ A + ++QSA+S +KELE+ GV+++ R+TR+V L+ Sbjct: 1 MNVTLRQLRAFVAVAKSASFTEAAATLHITQSALSGLIKELEHVLGVQVVYRSTRKVQLS 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 + G + R+L +L+ + SG VRVAA Q ++ L+P IA + +YP Sbjct: 61 EVGGEFLPLATRILQDLDEAYHAIHDLKALKSGVVRVAAPQLMACTLMPDAIAAFNSKYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +Q L D + V + G+VDF I + ++ ++ PF + D L Sbjct: 121 AVQIRLSDCAVEAVQSKVHSGEVDFAIGPEREVSPEIATHSLFEIPFVAVFPPDHPLGKL 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI- 239 V W + L+ R D A + + E+ T MV+AG+G+ Sbjct: 181 KRVTWTDISRYPLISLQGEYTQRLSADLQAASGNLTLSPGMEVTFMTTALSMVSAGLGVT 240 Query: 240 SILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQG 293 + LP L P + R+ L+ +K+R LS AA+ D + Sbjct: 241 TCLPYATSLLNLYGLQTRLLQAPTLRRKFYLLTKKDRPLSPAAQGFSDFLLAYV 294 >UniRef50_A6F002 Transcriptional regulator, LysR family protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F002_9ALTE Length = 299 Score = 289 bits (741), Expect = 8e-77, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 140/298 (46%), Gaps = 1/298 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L L+ F +VA+++SFSRA E I +SQ AVS +V+ELE G+ LL+R +V LT+A Sbjct: 1 MNLHLLRTFASVAEQRSFSRAAEAIHISQPAVSRAVRELEEQLGMALLERRGGQVRLTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G +L + S + D G + + AS+TI + +P IAE R++P I Sbjct: 61 GAELYQHARAIFALEQSAMADLRGRQGLERGSLTIGASRTIGTYFLPPVIAEFLRQFPAI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + + ++D + ++ + +L H D L Sbjct: 121 DVRIISENTELIQRRLLAYELDIAFIEGSVEDSRVEEVFWHEDELVILAHSDHPLLNRKS 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L + VL++ SG+R + A L + G++ + E+G L VAAG+G++++ Sbjct: 181 LKASDLDAERWVLREQGSGTRSVTLALLKQAGVKVDRTIEVGGNGALVQSVAAGLGLAMV 240 Query: 243 PALALPLPEGSPLV-VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 ++A V V +R L +R +N+ S AA+AL V + + G Sbjct: 241 SSVAAREHLSVGKVNVLNFPDRFKRPLHRIRLRNKPESPAAQALVAVADRVASTFLPG 298 >UniRef50_C3X7G6 Transcriptional regulator n=2 Tax=Oxalobacter formigenes RepID=C3X7G6_OXAFO Length = 291 Score = 289 bits (741), Expect = 8e-77, Method: Composition-based stats. Identities = 70/290 (24%), Positives = 142/290 (48%), Gaps = 4/290 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++QL+ F +A+E SRA +R+ ++Q +S+ +K LE GV+L+DR TR + LT A Sbjct: 1 MDIRQLRYFCAIAEEGQISRAAQRLHIAQPPLSYQLKLLEEELGVKLIDRNTRSLSLTKA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G R E++L + + + ++G + + + I IP+ I H+ YP + Sbjct: 61 GLAFYQRAEQILGLMKVAAIEARDVEYGVNGVLTIGSPPAIGNIYIPERIKRFHQEYPHV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSA-LAVED 181 +F + ++E + ++FGI P P+G + + +L+E + + D +D Sbjct: 121 RFQWREGNTYRILELLNADMIEFGIARLPVPMGSYESKPLLTESWMAVSRNDDPKWIGKD 180 Query: 182 YVPWQALQGAKLVLQDYASGS--RPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 + + L+G L+L +G ++ + G+ A++ E + + + +V A +GI Sbjct: 181 NIGLEELEGIPLILMQRQAGIHCHDMVIDEMKNKGVNADVFCESDNISAILSLVEAELGI 240 Query: 240 SILPALALPLP-EGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDV 288 +ILP L + G + ++ ++ +K++ LS AA+ ++ Sbjct: 241 AILPVSTLSVRPSGDFHAMAIANCQLQSSSAILWKKDKPLSAAAKLFLEM 290 >UniRef50_B8CTJ9 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CTJ9_SHEPW Length = 295 Score = 289 bits (741), Expect = 8e-77, Method: Composition-based stats. Identities = 64/292 (21%), Positives = 132/292 (45%), Gaps = 2/292 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +K L FVT+ + +++RA E++ L+Q ++ ++ LE + G LL R ++V+ T Sbjct: 1 MNIQIKNLHCFVTLVEMGNYTRAAEKLHLTQPTLTKMIQRLEENLGQPLLIRNNQKVIAT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+ L ++++ + + D + +G++R+ + +I + +A+ ++YP Sbjct: 61 EAGRALICTSQQIVGQWHRLREDLNSLNGLQTGQLRLGVCPMMGEMII-ELVAQFRKKYP 119 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPV-GDLQCEAILSEPFFLLCHRDSALAV 179 ++ + + +++ +D P + + P ++ LA Sbjct: 120 GVELSIQELGGFGAEQALLNDSLDLTFTALPTTHTQEFDSLELRGYPLLACLPKEHPLAE 179 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 +D + WQ L +L + LI ++ N+ + G + MV A +G+ Sbjct: 180 KDNIGWQDLAPYPFILYNDDFSLTKLIHRLSRSANVELNVAAQSGQWDFIAAMVEAKMGV 239 Query: 240 SILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 +ILP LV K + P + L L+ RKN L+ AA ++ R+ Sbjct: 240 AILPKPICQKVNSDSLVYKALKPQLTWDLALIWRKNLPLTPAASTFINLSRE 291 >UniRef50_B1Y3F3 Transcriptional regulator, LysR family n=2 Tax=Burkholderiales RepID=B1Y3F3_LEPCP Length = 314 Score = 289 bits (741), Expect = 9e-77, Method: Composition-based stats. Identities = 81/312 (25%), Positives = 143/312 (45%), Gaps = 15/312 (4%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 +++L+ L++F T+A SFSRA E++G+SQ AVS +++LE G L +R R+ LTD Sbjct: 3 DFNLRHLRIFETIASCGSFSRAAEQLGMSQPAVSMQLRQLETDLGTLLFERPQRQ-RLTD 61 Query: 62 AGQQLALRLERLLDELNSTLRDTG-----------RMGQQLSGKVRVAASQTISAHLIPQ 110 AGQ L +L ++ +T + G + + T + + P+ Sbjct: 62 AGQDLLQHARVILAQVRATEDAMAVHEAEASGASAAGARGPRGLLHLGVVST-AHYFAPR 120 Query: 111 CIAESHRRYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLL 170 ++E HRR+P+++ L + V+ +++ +D I P DL+ + P ++ Sbjct: 121 LLSEFHRRHPEVRLKLTVAKRSEVLAMLQEHRLDIAITGYPPSEADLEAASFARHPHCIV 180 Query: 171 CHRDSALAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLF 230 H ALA + W L+ + + ++ S +R ++ L IQ E+ T+ Sbjct: 181 AHPGHALARRRGLAWADLRDEEFIFREGGSATRQFLEHLLQSQSIQIKRGMELAGNETIK 240 Query: 231 PMVAAGIGISILPALALPLPEGSPL--VVKRITPVVERQLMLVRRKNRSLSTAAEALWDV 288 V G+GIS L A + G+ L V+ V+R++ L+ A A Sbjct: 241 QAVMCGMGISFLSAHTFQVELGAGLMAVLDVQGMPKLIDWCFVQRRDTLLTGANAAFRQF 300 Query: 289 VRDQGNALMAGR 300 V ++G L A R Sbjct: 301 VFEEGATLAACR 312 >UniRef50_A0KPM6 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=A0KPM6_AERHH Length = 297 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 65/298 (21%), Positives = 128/298 (42%), Gaps = 2/298 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++ L+ FV + +E+SF+RA E++ ++Q +S ++ +E G LL R R LTD+ Sbjct: 1 MDIRALRYFVELVREQSFTRASEKLFVTQPTISKMIRNMEEELGQPLLSRAGRRFTLTDS 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L R + +L E+ + + G++ + + H+ I RYP + Sbjct: 61 GRVLFNRAQTILAEMQQLEAELADLQSLQFGRLALGIPPMVG-HVYADLIRAYRSRYPKV 119 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGD-LQCEAILSEPFFLLCHRDSALAVED 181 + + + + + +++ +G++D I + P G L + P ++ Sbjct: 120 ELSIVEYGGRRIEQAVLEGELDLAITMLPTKEGGALSALELDQYPIQVVLPDLPRWRDCP 179 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + +AL +L A ++ A G + + L MV +G+G++ Sbjct: 180 EIRLEALCDEPFLLYTQAFTLSERLEQACRVAGFEPQVAARSSQWDFLTAMVRSGMGVAF 239 Query: 242 LPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 LP LV++ + P + +L ++ R LS AEA + R+QG G Sbjct: 240 LPEPICRRLAPDGLVLRPLVPELSWRLGVIWPSERYLSRTAEAWLALCREQGQTGPQG 297 >UniRef50_B9TDR3 HTH-type transcriptional regulator xapR, putative n=1 Tax=Ricinus communis RepID=B9TDR3_RICCO Length = 301 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 77/296 (26%), Positives = 129/296 (43%), Gaps = 8/296 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ LKQLK F+ VA+EKSFSRA ER+ +SQ +S + +LE+ GV+L RTTR LT Sbjct: 1 MSIDLKQLKYFLAVAEEKSFSRAAERLHISQPPLSQQIMKLESELGVKLFARTTRTFELT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG+ L LL + T+ ++ + G++RV + IP + E ++P Sbjct: 61 VAGKALMSEAADLLARMRMTIDTIRQIDRGEVGRLRVGIVGSAMWGPIPSLLEEFQTKFP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGD------LQCEAILSEPFFLLCHRD 174 + + LH+ E++R VD G +P D L+ E E + + Sbjct: 121 RVTWTLHEMGPTLQYEALRAKQVDVGFWREPRIDDDVLKNDNLRQELCFREDVCVAINEH 180 Query: 175 SALAVEDYVPWQALQGAKLVLQDYA-SGSRPLIDAALARNGIQANIVQEIGHPATLFPMV 233 LA ++ + + ++ S + + G Q I QE P TL MV Sbjct: 181 HPLAKQEAIELMDIAEEPMLTLALDKSSFPRYLMQCCVQAGFQPTIAQEATEPQTLLAMV 240 Query: 234 AAGIGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 AG+G++++P + + V + L + + A +++ Sbjct: 241 GAGLGVALMPETTSRIGWPGVVFVPIRSNPPSANLYITYTTQDD-APVVRAFLNIL 295 >UniRef50_Q12AP3 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=Q12AP3_POLSJ Length = 303 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 72/301 (23%), Positives = 135/301 (44%), Gaps = 1/301 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ FV +A+ +F+RA ER+ ++QS +SH +++LE G L +R + V++T+ Sbjct: 1 MELRHLRYFVALAECLNFTRAAERVHITQSTLSHQIRQLEEEIGELLFERVGKRVLITER 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + L E++ + + L+GK+R+ ++ T + IP+CIA R+P + Sbjct: 61 GELFLSYAAKALKEVDQGVAALKESARGLTGKLRIGSTHTFNQGFIPECIATLLVRHPTV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + E + G +D GI P VGDL E + +E L+ LA Sbjct: 121 KVAASEFTADDIGERLASGALDLGISYRPRTVGDLWFEPLYNEQMVLVVSPQHPLAGRKR 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L LVL A +R ++D + +V E+ A + +V +I+ Sbjct: 181 IRLVELHRQPLVLLPEAFATRAMLDECFRACDAEPLVVVEMNTLAPMLALVERTQIGAIV 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGREG 302 A+ + V +P R ++ +++ + A +VR + R Sbjct: 241 SENAVR-DRSTLRAVPLESPTPMRTPGILWKRDVDKTAPMRAFASIVRAIALSSRLRRPS 299 Query: 303 D 303 D Sbjct: 300 D 300 >UniRef50_B5WW96 Transcriptional regulator, LysR family n=2 Tax=Burkholderia RepID=B5WW96_9BURK Length = 334 Score = 288 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 68/303 (22%), Positives = 130/303 (42%), Gaps = 3/303 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L+QL++F+ ++ SF+RA E + L+Q AVS + +LE G+RL +R R++ LT+A Sbjct: 19 LTLRQLQIFIVASRYTSFARAAEELHLTQPAVSMQIHQLEEAVGLRLFERVARKLTLTEA 78 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L R+L E+ T + SG + V + + + P+ +A YP + Sbjct: 79 GEVLTHHASRILGEIKDTEDAMMSLKSADSGSITVGIVSS-ATYFAPKLLAMYSHLYPRV 137 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + ++ ++ +D I+ P P D E + S P ++ L Sbjct: 138 DVNFSVGNRDALLRLLQDNAIDLAIMGRPPPELDTTAEPLASHPQVVIAPLSHPLCGARR 197 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 Q L +L++ SG+R +A ++ +G T+ V AG+G+S++ Sbjct: 198 FDLQELCNDIFLLREPGSGTRMAAEAMFRQHLFTPAKTVTLGSNETIKQAVMAGMGVSLI 257 Query: 243 PALA--LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 L L G ++ +ER +V +++ LS + + + + Sbjct: 258 SLHTLQLELRTGEIALLDVNGTPIERTWQIVHLRSKQLSPTSVMFRQFLLEHAAVHLEQE 317 Query: 301 EGD 303 Sbjct: 318 YAA 320 >UniRef50_A4J6T9 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J6T9_DESRM Length = 299 Score = 288 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 71/299 (23%), Positives = 133/299 (44%), Gaps = 5/299 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L L+ F+ VA++K+ S A + I ++Q A+S + LE + G L++R R V LT A Sbjct: 1 MNLSTLQTFIVVAEKKNLSLAAQEIHITQPAISKQLSVLEAYFGTALVERKGRGVSLTPA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ +L++LN R+ +M ++ G++ + AS +++P I + YPD+ Sbjct: 61 GELFYRHAREMLEQLNKAEREIRQMSGEIRGRMILWASTIPGHYILPPIIGTFKKEYPDV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 Q VL + + + + V ++ S+ ++ D A + Sbjct: 121 QTVLQIGDSKEAIRKLLEESAHLAAVGILPNNKRIEGIKFFSDELVVIAPTDHPFAELNE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQ---ANIVQEIGHPATLFPMVAAGIGI 239 VP + L LV ++ SG+R +++ L + G+ NI E+G + V AG G+ Sbjct: 181 VPIEKLAKEPLVWRELGSGTRSVVETFLTKGGLSTDKLNIALELGSTGAIVTAVEAGAGV 240 Query: 240 SILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 S++ A +K ++R L LV + ++ S +A Q + Sbjct: 241 SVVSRWATLKEQALNKIATLKIKDLPMQRDLFLVYPRRKNRSPMIDAFIKYALKQNPPI 299 >UniRef50_B0C1S6 Transcriptional regulator, LysR family n=2 Tax=Cyanobacteria RepID=B0C1S6_ACAM1 Length = 298 Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 69/290 (23%), Positives = 133/290 (45%), Gaps = 3/290 (1%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 + +QL+ FV +A+E F RA +R+ ++Q A+S + LE GV+L RT R V LT Sbjct: 4 SIEFRQLQSFVVLAEELHFGRAADRLDITQPALSKQILVLEKAVGVQLFFRTKRTVTLTH 63 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 AGQ + +LL + + + T R G G++ + ++T + ++PQ + + +RYP+ Sbjct: 64 AGQTFLHQARQLLLQRDQAILLTRRTGDGEIGQLSIGFTKTATQTVLPQLLRQFVQRYPE 123 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + L + + + ++ Q ++D + P LQ + IL+E F + D Sbjct: 124 VDLDLRELATEAQVTALNQDNIDVAFLHPPIDQRGLQLQIILAESFVAVLPPQHPFVHLD 183 Query: 182 YVPWQALQGAKLVL--QDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 +P +A L++ + R G Q NI++E T +VAAG+GI Sbjct: 184 AIPLEAFANEPLIVHPRREGPILYDGFQQVCQRAGFQPNIIKESITLQTRLCLVAAGLGI 243 Query: 240 SILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 + + L + + ++ + R+N + + + +++ Sbjct: 244 TFVSDRLQALVGTNVVCRPIQDCPIQLEFGAAWRQNAA-NPVLQNFLELL 292 >UniRef50_A5D1Z5 Transcriptional regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D1Z5_PELTS Length = 297 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 68/304 (22%), Positives = 120/304 (39%), Gaps = 22/304 (7%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVK-----------ELENHTGVRLLD 51 + QL+ + VA+ SF+RA E +K +LEN GV L Sbjct: 1 MEMHQLEYVLAVAKYNSFTRAAEE-----------IKISQSSLSQQISKLENELGVSLFA 49 Query: 52 RTTREVVLTDAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQC 111 RTTR V LT AG + +R++ E R G + + I + +P Sbjct: 50 RTTRSVQLTPAGAEFVAYAKRIISEAIEARRCIQEYVAVEKGHLNLGVIPIIGYYNLPNL 109 Query: 112 IAESHRRYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLC 171 +A + YP I L + ++ ++ +D IV P LQ +L++ ++ Sbjct: 110 LANFAKNYPGITISLLEEQCDELLRLLQASKIDAAIVQHVIPEMQLQYYPLLTDQMVVVT 169 Query: 172 HRDSALAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFP 231 + + V + L+ + ++ SG A G + ++ T+ Sbjct: 170 YDRHPFSTRKSVDIRELKNERFIVTPPVSGHYHDFINACHLAGFEPKVLVTCSMVRTILG 229 Query: 232 MVAAGIGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 +V +GI++L + L + L + +TP V R+++L KN LS A + + Sbjct: 230 LVREEVGITVLSSCVAALDKTPGLSIIPLTPPVNRKIVLAVSKNNGLSPALKVFVKYIPQ 289 Query: 292 QGNA 295 NA Sbjct: 290 WVNA 293 >UniRef50_Q67KY5 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67KY5_SYMTH Length = 298 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 71/290 (24%), Positives = 131/290 (45%), Gaps = 3/290 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L L+V+ + + +SFS+A R +SQ AVS VK +E H RL++R+ + + T+A Sbjct: 1 MLLSYLRVYCDIIETRSFSKAAARNFISQPAVSQQVKAMEEHFQQRLIERSPQGIYPTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ +++ + + + Q +SG +RVA T+ H +P I + + YP Sbjct: 61 GRIFYEAAREIVERYQALEQQMANLSQSVSGTIRVATVYTVGLHDLPPYIKKFIQTYPQA 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE-D 181 + L + E++RQ VD GIV P L + S+ ++ + LA Sbjct: 121 RIHLEYSRTNKIYEAVRQNQVDIGIVAYPQEGRQLGVIPLPSDELVVIVSPNHPLARAGK 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V Q L + D +R D L +G+ I+ E + T+ V A +G+SI Sbjct: 181 PVALQQLHRLPFIAFDPDIPTRKATDRVLNDHGVDVEIIHEFDNVETIKRSVEAELGVSI 240 Query: 242 LPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 +P + GS + + +ER + ++ ++ ++ S + ++ Sbjct: 241 IPRRCAQWEVRSGSLVALPIADMRIERPVGVIYKRGKNFSNTLQKFIAIL 290 >UniRef50_C6NW00 Transcriptional regulator, LysR family n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NW00_9GAMM Length = 332 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 70/290 (24%), Positives = 135/290 (46%), Gaps = 5/290 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + +QL+VF+ V+ +SF++A + + L+Q VS +K+L G+ L ++ +E+ LTDA Sbjct: 21 ITFRQLQVFLAVSHHRSFTKAADALFLAQPTVSLQMKKLGEIVGLPLFEQIGKEIRLTDA 80 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ L + + + G++R+ T + ++ P+ +A +++P I Sbjct: 81 GQDLYTACREIFAIVENLETQIADRKGIRRGRLRLGVVTT-AKYIAPELLAAFGQQFPGI 139 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVID-PGPVGDLQCEAILSEPFFLLCHRDSALAV-E 180 QF + + ++ I+ + D ++ P ++ P ++ R L Sbjct: 140 QFSMTVSNRDEIIRRIQDSEDDLYVMGQVPTDEVAVEATPFAWNPLTVMVPRGHPLTRLG 199 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 VP A+ A ++++ SG+R A ++ NI E+ + +A+G+GIS Sbjct: 200 RPVPLAAIAEAPFLIREPGSGTRHAYLRLFAEKDLRPNITMELSSNEAIKHAIASGLGIS 259 Query: 241 ILP--ALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDV 288 IL +LAL EG V+ + R+ LV ++R LS A+ + Sbjct: 260 ILSIHSLALEGTEGPVEVLDAEGFPILRKWYLVYPRDRVLSLTAQKFMEF 309 >UniRef50_A7IBY1 Transcriptional regulator, LysR family n=15 Tax=Alphaproteobacteria RepID=A7IBY1_XANP2 Length = 313 Score = 287 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 68/290 (23%), Positives = 132/290 (45%), Gaps = 3/290 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L+QL++FV VA+ + ++ + L+QSA S ++ LE +L DR R +VLT+A Sbjct: 1 MTLEQLRIFVAVAEREHVTQGARDLNLTQSATSAAIAALEARYATKLFDRVGRRIVLTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + +L +++ + + G + +AASQTI+ + +P I ++P + Sbjct: 61 GRLFLSEAKAVLARVHAAEKVLTDLADLTRGSLVIAASQTIANYWLPPFIKRFRSQFPGV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L V I +G D G+V + + L+ D A A + Sbjct: 121 AITLTIDNTDGVARRINEGLADLGLVEGEIDDPSVSVAPFAEDELVLVVPPDHAWAHDPR 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQAN---IVQEIGHPATLFPMVAAGIGI 239 L VL+++ SG+R + + L++ G+ I E+ + V AG G+ Sbjct: 181 RQPAELGVGPWVLREHGSGTRAIFETTLSQFGLAPRDLAISLELPSNEAVRSAVEAGAGV 240 Query: 240 SILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 +++ L + + +V+ + +R+ +R K S++ A A D++ Sbjct: 241 TVVSGLVVSNALKAGSLVQVKLDLPKRRFFALRHKEFSMTRAQRAFLDLI 290 >UniRef50_A1S338 Transcriptional regulator, LysR family n=16 Tax=Shewanella RepID=A1S338_SHEAM Length = 302 Score = 287 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 69/298 (23%), Positives = 130/298 (43%), Gaps = 2/298 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +K L FVT+A+ SF+RA E++ L+Q +S ++ LE+H +L+ R +++ LT Sbjct: 1 MNIPIKNLHCFVTLAETGSFTRAAEKLHLTQPTLSKMLQRLEDHWQQQLIIRNNQKLSLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG+ L +L + + D + G +R+ +S+ +I + + RYP Sbjct: 61 QAGELLLEHAREMLGQWHLLEEDLSNLRGVQRGYLRLGVCPMMSSLVI-ELLTAFRARYP 119 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGD-LQCEAILSEPFFLLCHRDSALAV 179 ++ + + +++ ++D P D L + + + P LA Sbjct: 120 GVRLEMFEYGGFGCEKALLANNLDIAFTALPATHADELTAQPLTAYPLLACLPAGHKLAN 179 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 + + W ++ + L+D+ G++ N+ G L MV A +G+ Sbjct: 180 KAALDWCDFGSHPFIMYNQDFALAKLLDSLARNAGVELNVAYRSGQWDFLASMVEANMGL 239 Query: 240 SILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALM 297 +ILPA L + ++ L L+ R + L+ AA A + RD+G A Sbjct: 240 AILPAPICEKLTDKALCFRPLSGGHTWDLALIWRSHLHLTPAAAAFLALSRDRGQATA 297 >UniRef50_A8ZUD0 Transcriptional regulator, LysR family n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUD0_DESOH Length = 298 Score = 287 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 75/292 (25%), Positives = 131/292 (44%), Gaps = 5/292 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L +L+VF V + +SFSRA + LSQ VS VK+LE+H G RL+DR R V T A Sbjct: 1 MDLWRLRVFCKVVELRSFSRAAAGVRLSQPTVSSHVKDLEDHFGCRLIDRLGRSVAPTPA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L + LL + + +++G++ + S + H++P I R YP + Sbjct: 61 GELLYRQASDLLARYDGIEAEMAGYQGRVAGRLVIGGSTIPAGHILPGLIGAYRRAYPQV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + V I G + +V + + L++ ++ A Sbjct: 121 TVCLLVGDTEKVFFDILSGKAELAVVGGRTADRRIVQQPFLTDEMRVVVPASHPWAGRKT 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGI---QANIVQEIGHPATLFPMVAAGIGI 239 V L ++++ SG+R ++ +LA G N+V E+G + + +GIG+ Sbjct: 181 VAVADLAKEPFIVRERGSGTRSALEESLAARGAGIEGLNVVAELGSTEAVVQGIKSGIGV 240 Query: 240 SILPALALP--LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 S+L ++A+ + G + + R L ++RS S AA A ++ Sbjct: 241 SVLSSMAVAADVRAGMLKALALRGVKLTRVFYLAFLRDRSQSPAANAFCTLI 292 >UniRef50_Q7NCX0 LysR family transcriptional regulatory protein n=1 Tax=Gloeobacter violaceus RepID=Q7NCX0_GLOVI Length = 301 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 71/298 (23%), Positives = 132/298 (44%), Gaps = 6/298 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + +QL+VFV VA+ +F+RA E++ LSQ AVS +V LE + V L +R R + LT++ Sbjct: 1 MNFEQLRVFVAVAEHLNFTRAAEKLSLSQPAVSSAVAALETYYKVPLFNRMGRRIELTNS 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ L +++ E+ + G++ + +SQT+++ +P + ++YP + Sbjct: 61 GQLLLTEAHKVIQEITTIESKLRETKSLQRGELYIGSSQTVASWWLPPQLQRFRQQYPKV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 Q + + + E + G VD G+V L AI + + + L Sbjct: 121 QLKVVSGNTEEIGEWVAAGQVDIGLVEREVRNKSLTFNAIGGDKMAFVVGKQHPLWERTN 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQ---ANIVQEIGHPATLFPMVAAGIGI 239 + L+ + VL++ S R + + I +I E+ + A G G+ Sbjct: 181 IGLDELKSTRWVLRESGSDVRKFFEYLCFTHNIDADKLDIALELPNCAMTKRAAEVGAGV 240 Query: 240 SILPALALPLPEGSPLVVKR---ITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 ++L + + + PV+ER L+ R ++ S A +A +VR Sbjct: 241 ALLSVPLVEKEIKWGALRSLNTVLKPVMERNFYLISRNSQVTSPAVKAFSSLVRQSTP 298 >UniRef50_A6SW66 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SW66_JANMA Length = 289 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 2/291 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ F+ AQ +SF+RA E + ++Q +SH +K++E+ G++L DR R V LT A Sbjct: 1 MELRHLRYFLAAAQSQSFTRASESLHITQPTLSHQIKQIEDELGIQLFDRVGRVVKLTTA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + +R L E+++ L + G+V + +P +A+ ++ YP I Sbjct: 61 GELFQVYAKRALLEVDAGLDALNELENLKHGRVTFGVLSSFGTFHLPPILADFNKVYPGI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + E + GD+ FG+ P + E + + P L+ L Sbjct: 121 KITVLRLRSGEIEERLLDGDLHFGVAYAPSSTEQINVEPLFTVPLALVVGDHHPLVGSAG 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L +LV+ SR ++DA L NGI IV E+ + V +IL Sbjct: 181 ITLNELNEHELVMLSDEYNSRKMMDAILLANGITPRIVMEMNAIEPILATVRHSSLATIL 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQG 293 A + L +TP V + L R+N LS AA AL D +R + Sbjct: 241 SANLVDEM--PGLHQVPLTPTVTHTVGLFTRRNSHLSAAARALVDTIRQRF 289 >UniRef50_Q46SX0 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=Q46SX0_RALEJ Length = 300 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 157/289 (54%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +N+ L+ L+ FV +A++ SF A E + +SQ A+S +++LE G RLL+RTTR V +T Sbjct: 4 INFGLEDLQAFVAIAEKGSFRMAAEALHISQPALSRRIEKLEMTLGSRLLERTTRRVDMT 63 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+Q LD L+S + G G V VAA + + H +P I R+P Sbjct: 64 HIGRQFLEEARAALDILDSAVLRLGDEVGLQRGLVTVAAIPSAALHFLPDAICRFGNRHP 123 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ + D V+ S+ G+ DFG+ G +++ AI +EP+ L RD A Sbjct: 124 GVRVRVIDENANAVLASVLSGESDFGLNFMGGQEPNIEFRAIRAEPYRLALRRDHPWAGR 183 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 D + W+ L G ++V SG+R LI+ A+A + I E H + +V AG+G++ Sbjct: 184 DCIAWEELAGQRMVSVSKQSGNRALIENAIAHLTRRPTIHYEANHVVGVLALVEAGLGMA 243 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 +LP ++LP ++ + P V+R L L+RR++R L AAEAL++++ Sbjct: 244 VLPGMSLPRDHPRLCGIELVEPSVDRVLALIRRRDRPLQPAAEALYEIL 292 >UniRef50_B4ETA7 LysR-family transciptional regulator n=37 Tax=Enterobacteriaceae RepID=B4ETA7_PROMH Length = 296 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 84/294 (28%), Positives = 145/294 (49%), Gaps = 6/294 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M +L+QL+VF V + S ++A +++ LSQSAVS S+ +LEN GV+L DR + +V Sbjct: 1 MRITLRQLEVFTEVLKSGSTTQASQQLALSQSAVSASLTDLENQLGVQLFDRVGKRLVTN 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 + G+ L R L L + ++ Q +G +R+AAS TI +++PQ + HR YP Sbjct: 61 EHGRLLYPRA---LSLLERA-TEVEQLFQAGNGALRIAASTTIGNYILPQMLGNFHRNYP 116 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 DI + + V++S+ + VD G++ +L + L + + C + LA Sbjct: 117 DIPLEMSIGNTEEVVKSVSEFRVDLGLIEGACQSSELISQKWLLDEMVIFCSPEHPLAKA 176 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V LQ A +L++ SG+R +++ L + I E+G+ + V +GIS Sbjct: 177 KTVTLADLQSAPWILRENGSGTRDVLNHLLFASLPGYRIEMELGNSEAIKHAVMYEMGIS 236 Query: 241 ILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 L + + GS +K ++R L LV + + +S A + L + Sbjct: 237 CLSRRVIQDQIESGSLKEIKVEGLKLQRTLYLVYHRQKHVSDALKKLLSYCNAE 290 >UniRef50_C6BXQ9 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BXQ9_DESAD Length = 301 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 113/292 (38%), Gaps = 4/292 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +QLK F+ VA+E F RA +R+ +SQ +S +K+ E+ GV+L R R V LT A Sbjct: 1 METRQLKYFLAVAEELHFGRAAKRLFISQPPLSQQIKKFEDELGVKLFQRNKRSVALTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L ++ + + G+ + + + I + +YP + Sbjct: 61 GVSLLRDAPGIMRAIGRAKSNLLDAATGEGGQFTLGYIGPALETTLTEIIRDFKGQYPSV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPV-GDLQCEAILSEPFFLLCHRDSALAVED 181 + L + +++IR GD+D GIV DL+ E E + L+ LA Sbjct: 121 RLDLREMFTTDQLKAIRSGDIDAGIVRLFRHDVSDLERELFHRESYALVVPDGHPLADRA 180 Query: 182 YVPWQALQGAKLVLQDYA--SGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 V L G + + + G ++VQE + +VAA +GI Sbjct: 181 AVDVSELAGEQFIFFPREGQPRLYDEWMRVFSEAGFVPDVVQEATRKSATVALVAANMGI 240 Query: 240 SILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 I+P + + + ++ L+ R A + VR Sbjct: 241 GIVPESMARIKPQGVVFKRLSGDFPVIEMSLIYRSTNGF-PAVDNFIAAVRQ 291 >UniRef50_C6C982 Transcriptional regulator, LysR family n=1 Tax=Dickeya dadantii Ech703 RepID=C6C982_DICDC Length = 298 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 136/294 (46%), Positives = 197/294 (67%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N SL+QL++F+ VA+ FSRAG + L+QSA+SHS+ +LEN G+RL +RTTREV+LT Sbjct: 5 NISLRQLRIFLAVAEHHGFSRAGNMMSLTQSAMSHSIGDLENELGIRLFERTTREVLLTQ 64 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 G +L+ L R+L EL +TL +T ++ G V VA S TISA ++P CIA+ YP Sbjct: 65 EGAELSEALRRVLGELETTLCNTQSRAERRRGLVHVATSPTISAGIMPDCIAQIAENYPQ 124 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + ++HDR QQ M+ + G+VDFG++I+P DL E + EPF L+ + +A Sbjct: 125 VNLIIHDRVQQQAMQMVLNGEVDFGVIIEPSVPSDLYTETFMEEPFCLVLPENHQIARLK 184 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V W LQ ++VL DYASGSRPLID AL R+G+ +++QE+GH T+F ++ +GIG+S+ Sbjct: 185 QVTWHDLQNQEMVLLDYASGSRPLIDNALIRHGVTPHVIQELGHVTTIFRILQSGIGVSV 244 Query: 242 LPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 +P LAL E S L V+++ P+ R+L LVRR+N SLSTAA A+W +++ A Sbjct: 245 IPQLALSSLECSGLAVRQLWPIENRRLQLVRRRNHSLSTAATAIWTLIQTLCQA 298 >UniRef50_Q67MJ1 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MJ1_SYMTH Length = 273 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 5/268 (1%) Query: 29 LSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLALRLERLLDELNSTLRDTGRMG 88 ++Q ++S ++ LE GV L DR+ V LTDAG+ L E +L ++ + Sbjct: 2 VAQPSLSQQIRRLEEELGVLLFDRSRTPVRLTDAGEALLPHAEAILRQVEAAGAAVEERI 61 Query: 89 QQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLHDRPQQWVMESIRQGDVDFGIV 148 SG++ + + + L+P+ I +RYP +Q L + P Q + E + D + Sbjct: 62 GLRSGRLVLGSLPVTGSRLLPRAITAYRQRYPGVQITLREEPTQRLTELALADETDLTLT 121 Query: 149 IDPGPVGDLQCEAILSEPFFLLCHRDSALAV----EDYVPWQALQGAKLVLQDYASGSRP 204 P +L + +L+EP L D LA +P A+ G ++ G R Sbjct: 122 TLPVGSDELDWQPLLTEPILLALPPDHPLAADGPPHPAIPLSAVAGEPFLIMKPGYGFRD 181 Query: 205 LIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALALPLP-EGSPLVVKRITPV 263 L+ AA G I E TL MVAAG+G++++P +A SP+ V Sbjct: 182 LVLAACQAAGFSPQIAFESAQIETLQAMVAAGLGVTLVPQMAADRSLRPSPVFVPLAGAP 241 Query: 264 VERQLMLVRRKNRSLSTAAEALWDVVRD 291 + R L L R++R L +A+A + + Sbjct: 242 LTRTLALAWRRDRPLPRSAQAFLKLASE 269 >UniRef50_Q1DBN8 Transcriptional regulator, LysR family n=2 Tax=Cystobacterineae RepID=Q1DBN8_MYXXD Length = 301 Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats. Identities = 77/294 (26%), Positives = 127/294 (43%), Gaps = 3/294 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +QL++FV VA+E F RA RIG++Q S ++ LE+ GV LL RT+R V LT A Sbjct: 1 MEFRQLQLFVAVAEELHFGRAAARIGMAQPPFSQQIRRLESELGVELLTRTSRRVALTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G +L LL + + +G +RV + + + ++P + R+P + Sbjct: 61 GSRLLEDARALLARRADVIHSVQQAASGETGTLRVGFAASSAFGVLPDIVLRFRTRFPKV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L D V ++ G++D I+ P L E +L E F L A + Sbjct: 121 KLELDDSETLDVGAALVSGELDIAIIRAPFRHEGLTVERLLQERFVLALPARHPRARQQV 180 Query: 183 VPWQALQGAKLVLQDYAS--GSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V +L VL S G L+ + G NI+QE ++ MV AG+G++ Sbjct: 181 VALSSLANEPFVLFPRHSAPGLHDLVTSMCLGAGFSPNILQEASSWPSVVGMVEAGLGLT 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 I PA + L + +L++ R + AA+ + + + Sbjct: 241 IAPASSQALCPKGVVFRPLSGAPGHAELVVAFPGTRP-APAAQHFRVLAHEAVS 293 >UniRef50_B4CXF3 Transcriptional regulator, LysR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXF3_9BACT Length = 309 Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats. Identities = 73/283 (25%), Positives = 137/283 (48%), Gaps = 1/283 (0%) Query: 13 TVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLALRLER 72 VA+ +F+RA E+ +SQ ++S +++LE G RL DR R+ LT G+ R R Sbjct: 26 AVARAGNFTRAAEQCRVSQPSLSQQIQKLEEELGERLFDRMKRQTKLTSYGEAFVRRAVR 85 Query: 73 LLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLHDRPQQ 132 +L+E LR+ LSG + + TI+ +L+P+ I+ R+YP ++ V+ + Sbjct: 86 ILEEAEMALREATDAKSLLSGMLTIGVLPTIAPYLLPEAISAFARKYPGVEVVVQEDTTG 145 Query: 133 WVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQALQGAK 192 +++ + ++DF I +P + + + +E L LA + VP AL+G + Sbjct: 146 HLLKHLTTYEIDFAIASNPIEDSRFEIQELFAEELLLALPAGHPLARKRTVPASALKGER 205 Query: 193 LVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALALPLPEG 252 L++ + ++ + T++ +VAAG+G+S++PA+A Sbjct: 206 LIVMREGHCLGDQVLGFCEHREMKPTVSFRSAQLETIYALVAAGLGLSLIPAMAAATERA 265 Query: 253 SPLVVK-RITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 + L ++ P ER+++ V K R L AA D++ + Sbjct: 266 NALELRSIQAPRPERKILAVWPKQRPLGRAARVFLDLMSARSK 308 >UniRef50_A3K7Z5 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Sagittula stellata E-37 RepID=A3K7Z5_9RHOB Length = 333 Score = 286 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 75/292 (25%), Positives = 137/292 (46%), Gaps = 5/292 (1%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 L+QL+ F+ VA+E +F+RA E++G++Q +S + LE V+LL+R+ R V LT Sbjct: 28 RIELRQLRYFLAVAEELNFTRAAEKMGIAQPPLSQQILVLEQQLRVKLLNRSRRHVSLTP 87 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 G+ L R+++ G + + G + VAA + ++PQ ++P Sbjct: 88 EGEAFILYARRIINNTQIAAELVGAIKRGEEGPLSVAAIFSSIYTVVPQLFEAFVAQHPR 147 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 ++F L + + ++R+ +D GI+ P +++ +L EPF ++ + LA + Sbjct: 148 VRFHLQEMTIGQQLVALREERIDLGILRGPIIHPEIETHTLLEEPFVVVVSKKHPLAKQT 207 Query: 182 YVPWQALQGAKLVLQDYASGSRP---LIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 + + L+ + S +R + + LA NIV E+ TL +VAAG+G Sbjct: 208 ILTADQVLSQPLI-RVIPSVNRDYSHQMFSVLANRNTTPNIVHEVSDTHTLLGLVAAGMG 266 Query: 239 ISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 IS++PA + + + L K+ ST+ L DV + Sbjct: 267 ISMVPASVRSIHTDQLRYIPLREGTPTSTIQLAWLKDSD-STSLPRLVDVAK 317 >UniRef50_Q2RZH0 Transcriptional regulator, LysR family n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZH0_SALRD Length = 300 Score = 286 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 69/296 (23%), Positives = 122/296 (41%), Gaps = 3/296 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ F +A E F RA + + ++QS +S +K E GV L DR + V LT+A Sbjct: 1 MELRHLRYFTALADELHFGRAADAVFVAQSTLSQQIKAFEEEIGVALFDRASGGVELTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G +R+L E L+G + + + + +P I + P Sbjct: 61 GHTFLPYAKRVLREARRAESVARAARDGLAGLLTITYAASAMRSGLPAIIKTFRSKRPHG 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L ++ + ++++R + D G + P L+ + + + P ++ LA Sbjct: 121 ELDLVEQTTREQVDALRGKETDVGFLFLPINERGLRVQPLFTAPMVVVLPTGHRLADRTS 180 Query: 183 VPWQALQGAKLVL--QDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 VP + L+G V+ + A A G I QEI + +V AG+G+S Sbjct: 181 VPLRELEGEPHVIWARSGAPRIHDAYVRACHEAGFTPQIPQEIERGESFLGLVEAGLGVS 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 I A + + K + P V L L R++ S + + V D+ +A Sbjct: 241 IAHASNVQIQRPGVGYAKIVEPTVPLTLGLAYRRDND-SPLLDRFLETVADEQDAF 295 >UniRef50_C1DGS2 Transcriptinal regulator, LysR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DGS2_AZOVD Length = 301 Score = 286 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 62/289 (21%), Positives = 116/289 (40%), Gaps = 4/289 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ F+ +A+ F +A E + ++Q +S + LE GV L R +R V LT A Sbjct: 2 IELRQLRYFMALAEHLHFGKAAESLHITQPPLSRQISALEADLGVVLFSRHSRSVELTAA 61 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + L EL+ +R T + G++RV+ + + L+P+ + YPD+ Sbjct: 62 GRDFQQHAKTALAELDLAIRSTRASARGERGELRVSFTMVAAWILLPELLKAYSDAYPDV 121 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L++ + + ++ +G+ D + L A+ EP + LA Sbjct: 122 SLALNEVLPRDLGPALERGEADIALTFPSSGSKSLCYRALRREPLCAVLPASHPLAAATE 181 Query: 183 VPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 AL + A + + R G + I E T+ +VA G+G+S Sbjct: 182 FSIAALADEPFITFPRQTAPALHEAVMSCCRRAGFEPKIRLETHLQQTIVNLVAEGLGVS 241 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 ++P + + K I + ++ R+ + V Sbjct: 242 VVPGSMRKMRMP-GVAFKAIDRSPPVEYGVIWNP-RNENPCLNTFLRCV 288 >UniRef50_A0QNN2 Transcriptional regulator, LysR family protein n=3 Tax=Corynebacterineae RepID=A0QNN2_MYCS2 Length = 293 Score = 286 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 72/287 (25%), Positives = 111/287 (38%), Gaps = 2/287 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L +L FV +A+ + + A +G+SQ +S ++ LE+ GV L DR R + L Sbjct: 1 MHLDELSWFVVLAETEHVTDAAAELGISQPTLSRALARLEDEVGVPLFDRVNRRLQLNAY 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L R + E+ S M +G VR+A + + +P + P + Sbjct: 61 GEILLEHARRTITEMRSATERIAAMRDPDTGLVRLAFLHSQAGSFVPDLLRRFRAHAPHV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 QF L ++E + G VD I Q + E L R LA Sbjct: 121 QFSLTQGAAHDLLERLAGGQVDLAITS--PRPEGFQWRGLYVERLCLAVPRGHRLASRSR 178 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + V G R L + A GI ++V E T+ +VAAG G++++ Sbjct: 179 ITLADAGDEPFVGLAPGFGLRQLTEELCAEAGITPHVVFEATEIPTMEGLVAAGFGVAVV 238 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 P E + +RQL L +R L AAE V Sbjct: 239 PVPHAGRAEPGAEYIALAQASAKRQLGLAWPADRPLPPAAERFAQFV 285 >UniRef50_Q46Q42 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46Q42_RALEJ Length = 297 Score = 286 bits (733), Expect = 7e-76, Method: Composition-based stats. Identities = 96/293 (32%), Positives = 153/293 (52%), Gaps = 3/293 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN S+K L+ FV +A ++F+RA LSQSA S V+ LE G RL +RTTR V L+ Sbjct: 1 MNLSVKHLRAFVALATHRNFTRAARACHLSQSAFSALVQTLEEQAGSRLFERTTRHVELS 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G + RLL + + D ++ G+V +AA +I+ +P +A +RYP Sbjct: 61 ADGMRFEETARRLLGDFEAAFEDLRAHAERRKGRVSIAALPSIAGGDLPPLLAAFRQRYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I L D+ ++ +R+G DF + P DL+ E ++ + F L+C LA + Sbjct: 121 GIALELFDQLADGCIDLVRRGRADFALAPAPVQDDDLRVEPLVHDTFHLVCPTTHVLARK 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + Q L G + S R +DAAL + ++ + V E+ H AT+ +V AG+G+S Sbjct: 181 RRITPQMLAGQPFIHLSRTSSVRQHLDAAL--HPLKLSSVMEVEHLATVAALVQAGLGVS 238 Query: 241 ILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 ++P+LAL + L V+ + P + R + LVR ++R S AA A+ D + Sbjct: 239 VVPSLALFQFQRDGLAVRPLQMPSLVRDICLVRLRDRGDSAAAAAMIDCLHVH 291 >UniRef50_B2JVU4 Transcriptional regulator, LysR family n=43 Tax=Proteobacteria RepID=B2JVU4_BURP8 Length = 322 Score = 286 bits (733), Expect = 7e-76, Method: Composition-based stats. Identities = 96/302 (31%), Positives = 157/302 (51%), Gaps = 1/302 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 +N+ L L+ F V + SF +A E + +SQ A+S + +LE GVRL +RTTR V LT Sbjct: 3 INFDLNDLQAFRAVVELGSFRKAAEAVNISQPALSRRIDKLEEALGVRLFERTTRSVTLT 62 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G+ A E+LLD+L+ L + G V +A +++ + +P +A HRR+P Sbjct: 63 TVGRVFAPSAEQLLDDLDVALLGIRDVSSSRLGHVTIACVPSVAYYFLPGAVASYHRRFP 122 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ + D V+ ++ G+ DFG+ D++ + +L E F C RD LA + Sbjct: 123 RIRVKILDSSANDVLAAVISGEADFGVSFMGSQEPDVEFKMLLQERFVAACRRDHPLARK 182 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V W L + V D SG+R L+D AL + V E H T+ +V AG+G++ Sbjct: 183 KRVTWNELYEHEYVSVDKTSGNRLLLDQALGAVSPRMPSVCETRHVTTMLGLVEAGLGVA 242 Query: 241 ILPALALPLPEGSPLV-VKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 +P++A+P L V + PVV+R++ +VRR+ R L+ AA+ + + + A Sbjct: 243 AVPSMAMPGRNHHILTSVPLVEPVVKRRVGIVRRRGRPLTPAAQEFHKTIVEMRHGAAAS 302 Query: 300 RE 301 + Sbjct: 303 GD 304 >UniRef50_B2Q0Q6 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q0Q6_PROST Length = 295 Score = 286 bits (733), Expect = 8e-76, Method: Composition-based stats. Identities = 76/293 (25%), Positives = 127/293 (43%), Gaps = 1/293 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++ L+ FV V Q FSRA ER+ ++Q A+S S+++LE G LL R V LTD Sbjct: 1 MDIRSLRYFVEVVQLNGFSRAAERLFVTQPAISRSIQKLEQELGYTLLVRENDGVRLTDE 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L +++L + NS + LSG + V I++ I RRYP + Sbjct: 61 GEILLSHAKQILKQFNSMNKALKEKEGPLSGILNVGLPPVIASTYFADIIMAFSRRYPQV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + +ME++ G+V+ V+ P S+ LL LA+ + Sbjct: 121 ELKILELGTHKMMEAMLNGEVETAAVMLPFDNELFDLHVFSSDRLMLLVSEQHPLAMRNS 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V + L + L+ +A G + I H + MV AG+G+++L Sbjct: 181 VKFAELIDEPFIFFSEDFRINELVMSACGIYGKKPVIAGRSSHLDLVTAMVRAGVGVTLL 240 Query: 243 PALALPLPEGSPL-VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 P L ++ I PV+ ++ L KN S A+A + ++ N Sbjct: 241 PDSMWNKTRADGLSIIPVIEPVLSYEVALATLKNSHQSRRAKAWNALAKEMLN 293 >UniRef50_Q21S72 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=Q21S72_RHOFD Length = 317 Score = 285 bits (732), Expect = 9e-76, Method: Composition-based stats. Identities = 68/305 (22%), Positives = 136/305 (44%), Gaps = 18/305 (5%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L +LK V VA+E+ F +A E +SQ +S +VK+LE V+L +R+ EV +T Sbjct: 1 MTLTELKYIVAVARERHFGKAAEACYVSQPTLSVAVKKLEEELDVKLFERSANEVTVTHL 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+++ + + +L++ ++ R L+G + + TI +L+P + + P + Sbjct: 61 GEEIVRQAQSVLEQASAIKEMAKRGKDPLAGPLTLGIIYTIGPYLLPDLVRQMISHTPQM 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 +L + ++E +R G++D I+ +P P L + EPF + + LA + Sbjct: 121 PLMLQENFTVKLLEMLRTGEIDCAILAEPFPDAGLAIAPLYDEPFLAVVPANHPLAAQTQ 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALAR-NGIQ-----ANIVQEIGHPATLFPMVAAG 236 V + L+ ++L R + E T+ MVAAG Sbjct: 181 VTTEQLKQETMLLLGSGHCFRDHVLEVCPEFARFSTNAEGIRRSFEGSSLETIKHMVAAG 240 Query: 237 IGISILPALALPL------------PEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEA 284 +G++++P L++P + + +R+++L R++ + A A Sbjct: 241 MGVTLVPRLSVPKEALALKPRRKRDEDPYVKYLPFEGDPPKRRVVLAWRRSFTRYEAIAA 300 Query: 285 LWDVV 289 L + + Sbjct: 301 LRNAI 305 >UniRef50_C9YD50 RuBisCO operon transcriptional regulator n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YD50_9BURK Length = 326 Score = 285 bits (732), Expect = 9e-76, Method: Composition-based stats. Identities = 74/303 (24%), Positives = 142/303 (46%), Gaps = 4/303 (1%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N +L+QL++F VA S+SRA E + ++Q AVS +++LE G++LL +T R+V L+ Sbjct: 23 NLTLRQLRLFEAVATHLSYSRAAEVMNVTQPAVSMQIQQLETEVGLQLLVKTGRKVSLSQ 82 Query: 62 AGQQLALRLERLLDELNSTLRDTGRM--GQQLSGKVRVAASQTISAHLIPQCIAESHRRY 119 AG+++ + R+L+++ G + G + + + + P + R+ Sbjct: 83 AGEEMLRQCRRILNQVLLAEESMGAFHPAEGGHGGLLHLGVVSSAHYFAPALLMAFAERW 142 Query: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 P ++F L ++ ++ ++ +D I P D++ E P ++ + LA Sbjct: 143 PGVKFKLTVDRRETILAMLQGHQLDVAIAGYPPSEADVEAETFAQNPHCIVASANHPLAR 202 Query: 180 EDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 + V W AL+ + ++ S +R + + +Q + E+ T+ V AG+GI Sbjct: 203 KRRVHWDALRNEPFIFREPGSATRHFFEHLIQAQSLQVRLSMELSGNETIKQAVIAGMGI 262 Query: 240 SILPALA--LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALM 297 S L A + G V++ L+ R++ SLS +A + V +G AL+ Sbjct: 263 SFLSAHTFQVEFEAGKLAVLQMEDMPKMLDWCLLHRRDSSLSGVNQAFREFVLTEGAALV 322 Query: 298 AGR 300 R Sbjct: 323 QCR 325 >UniRef50_C7RPQ0 Transcriptional regulator, LysR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RPQ0_9PROT Length = 303 Score = 285 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 79/298 (26%), Positives = 139/298 (46%), Gaps = 3/298 (1%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N +++QL++F A SF+RA E++ L+ +A+S +K+LE+ +G L +R + V LT+ Sbjct: 3 NATIRQLQIFSVAASHLSFARAAEKLHLTHAAISLQIKQLEDVSGALLFERIGKRVFLTE 62 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 AG+ L ++L L + G++ VA + T + + P +AE + D Sbjct: 63 AGEILLDHTRQILQSLKEADEALLALKGLRGGRIAVAVAST-AEYFAPGLLAEFRKVQAD 121 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 ++ L + V + +VD I+ P D A P ++ LA + Sbjct: 122 VRIRLLIDNRDTVTRLLVGNEVDLAIMGRPPAELDATAVAFAPHPLVIVASAAHPLAGQA 181 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V + L G L++++ SG+R ++ I+ I E+G + V AG+GIS Sbjct: 182 NVAVEDLAGETLIVRETGSGTRSAMEEFFQERSIKPRIGMEMGSNEAIKQAVVAGLGISF 241 Query: 242 LPALA--LPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALM 297 + L L +++K V R+ +VR KN+ L+ A A WD V + A + Sbjct: 242 ISQHTLGLELSAARLVILKVEGTPVIRRWHIVRHKNKHLTPALGAFWDFVLEFAPAYL 299 >UniRef50_B4CZS1 Transcriptional regulator, LysR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZS1_9BACT Length = 305 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 2/290 (0%) Query: 9 KVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLAL 68 KVF +A+ SFS+A ++QSAVS ++ LEN V L++R R LT G Sbjct: 7 KVFCDLAETGSFSKAAVLNAITQSAVSQQIRALENKFQVTLVERGRRNFALTAEGNAFLE 66 Query: 69 RLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLHD 128 +L+ N+ + ++G++R+AA +I H +P + ++PD++ + Sbjct: 67 ASREILEVYNNLDHRLHELRDVIAGELRIAAIYSIGLHELPSHLKAFREKFPDVELHVEY 126 Query: 129 RPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQAL 188 R Q V + GDVD G+V P LQ E + L+CH + LA + + L Sbjct: 127 RRSQQVYTQVLGGDVDIGLVAFPTKRNGLQIEIFSEDKLVLICHPNHPLAGRKKIKIEEL 186 Query: 189 QGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALALP 248 G K + + +R +ID + I+ E + T+ V G+SI+P + Sbjct: 187 NGEKFIAFEPDLPTRKVIDRHFRDHQIEIEHAMEFDNIETVKRAVEIESGVSIVPRNTVR 246 Query: 249 LPEGSPL--VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 S + + P + R L ++ ++NR+ S A + ++ AL Sbjct: 247 QEVESGVLSALDIEGPKMSRPLGILTKRNRARSPAHKEFVAALKRDFAAL 296 >UniRef50_A8IAC4 Transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IAC4_AZOC5 Length = 313 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 106/292 (36%), Positives = 162/292 (55%), Gaps = 4/292 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+ FV VAQ SFSRA +GLSQSA+S +V++LE GVRLLDRTTR V L+ Sbjct: 3 MNMNLRQLRAFVAVAQTGSFSRAARLLGLSQSALSQAVQQLEADLGVRLLDRTTRSVQLS 62 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 G++ ++R+L +L+ L+D + + G V V +++ L+PQ +A+ +P Sbjct: 63 AIGREFLPGVQRVLADLDHQLQDLRDLKEHRRGHVTVTCVPSVALRLLPQVLAQFQEAHP 122 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + + + P+ ++ ++R GD + G+ PG DL +L++ F L+ RD LA Sbjct: 123 MVSVAVREAPRHQIITALRSGDAELGVANVPGDDPDLDSTFLLTDSFALVMRRDHPLAAH 182 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + V W+ A L+ +G R ++ L A E HPATL MV AG+G++ Sbjct: 183 ESVTWEEAGQAGLIAMAPGTGIRLEMERGLPA---PAVPHHEAEHPATLLAMVEAGVGVA 239 Query: 241 ILPALALPLPEGSPL-VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 LP LA P P+ + L + P VERQL L++R R L+ A AL + Sbjct: 240 PLPGLAWPRPDHAGLTFRPLVEPRVERQLFLIKRAGRDLTPAGRALHRAILA 291 >UniRef50_C9YDU9 HTH-type transcriptional activator cmpR n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YDU9_9BURK Length = 309 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 71/297 (23%), Positives = 137/297 (46%), Gaps = 3/297 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN + KQL+ F+ +A+++S + A + ++Q VS +KE+ + G+ L + T +++ LT Sbjct: 13 MNVTFKQLRTFLALAEQESITAASRALHVTQPTVSMQLKEITDSVGMPLYEVTGKKLQLT 72 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+ L +L E + + +G++R+A T + + P+ + + R +P Sbjct: 73 EAGRDLEATARAMLHEWDLFEQGIAAKRGLTAGRLRLAVVST-AKYFTPRLLGDFCRMHP 131 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 +++ L + V++ +R+ D I+ P D A L+ P L+ +A+ Sbjct: 132 EVEISLEVLNRDGVVQRLRENVDDLYIMSKPPADIDAVAHAFLANPLVLIAPLAHPMALT 191 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + + LQ + VL++ SG+R DA A + I E+G L VA G+G+S Sbjct: 192 KNIALEDLQAERFVLREKGSGTRLNTDAHFASHHFIPRIRLEMGSNEALKQAVAGGLGLS 251 Query: 241 ILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 ++ AL + V++ + V + + S AEA + A Sbjct: 252 VVSRHALGPDIAGQGLAVLEVKGFPIVSNWYTVHLQGKRPSPLAEAFMGYLERFAAA 308 >UniRef50_Q13AV2 LysR, substrate-binding n=2 Tax=Alphaproteobacteria RepID=Q13AV2_RHOPS Length = 319 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 68/309 (22%), Positives = 136/309 (44%), Gaps = 8/309 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ +L+QL++F V++ + F+RA E + L+Q AVS ++ LE + G +L + + LT Sbjct: 5 MHLTLQQLRLFEAVSRHRHFTRAAEELHLTQPAVSIQLRRLEENVGAKLFEHIGKRFFLT 64 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG ++ +L L + + L G +R++ + + + +P + +P Sbjct: 65 PAGHEMQAACNDILGRLQVLEQSLDSLDDTLKGPLRLSVVTS-TKYFLPHLLGSFIVDHP 123 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + L ++ V+E + + DF I+ ++ + H L+ Sbjct: 124 AVLPRLIVTNRERVIERLVENLDDFVIMGQAPDDLAVEAHPFYENLIVVAAHTQHPLSAV 183 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 +P + + ++++ SG+R D L N + E+G + V AG+G+S Sbjct: 184 RSIPPLQIARERWLVREAGSGTRSAFDRYLIENDLAITPYMELGSTEAIKQGVMAGLGVS 243 Query: 241 ILPALALPLPEGSPL--VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR-----DQG 293 +LP ++ L + V+ + R+ V K ++LS A A D + D+ Sbjct: 244 VLPISSMQLELTNGCLAVLDVQGFPLCRRWNAVWLKGKTLSPVARAFVDFLLAGASSDRT 303 Query: 294 NALMAGREG 302 + L+ GR Sbjct: 304 SPLVGGRPS 312 >UniRef50_A9BVL3 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=A9BVL3_DELAS Length = 299 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 136/296 (45%), Gaps = 3/296 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ F+ +A+E FSRA +R+ +SQ +S ++++LE G +L +RT++EV LT A Sbjct: 1 MELRQLRYFLVLAEELHFSRAAQRLSISQPPLSVAIRQLEEELGAQLFERTSKEVRLTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L ++ + ++++ +D + + G++R+ + +P+ + R+P + Sbjct: 61 GKHLRVQAQDIMEQAQRVRQDMRAIADGVQGRIRLGFVGSAIYRGLPEALESFRARHPLV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + + ++Q +D G++ P LQ ++SEPF ALA + Sbjct: 121 RIDMLELNSAEQIAGLQQERLDLGLLHATRPAPGLQSHTLVSEPFMACLPAGHALAGQRT 180 Query: 183 VPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + + L G ++VL + I G ++ E+ H ++ MV+ G+S Sbjct: 181 LQVRQLAGERMVLFSRQVSPDYHQQIWQICQSEGFTPDLHHEVRHWLSVLSMVSLDQGVS 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNAL 296 ++P+ + V + Q+ + E+L +RD L Sbjct: 241 LVPSCLQRVGFPGLAFVPIQGRHPQSQMQAMWHPGHVQ-PLVESLLAHLRDSVRRL 295 >UniRef50_A6UGP0 Transcriptional regulator, LysR family n=2 Tax=Sinorhizobium RepID=A6UGP0_SINMW Length = 298 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 86/295 (29%), Positives = 150/295 (50%), Gaps = 1/295 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+ F+ VA+ F A + +GL+QSA+S +++LE RL DR TR V LT Sbjct: 1 MNVTLRQLQAFIAVAELGRFHLAADHLGLTQSAISILIRDLEAVLKHRLFDRHTRMVSLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG + + +++ +L + + + G+V +AA+ ++A L+P IA +RYP Sbjct: 61 TAGAEFLPQARKIMSDLEIAVTNVHELANLQRGRVTIAAAIVLAATLLPPVIARFVKRYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 DIQ + D P++ + ++++ + D GI ++Q ++ + L+C D A Sbjct: 121 DIQVQVRDMPEEEIRSALKRNEADLGIGTVSADDPEIQASVLMRDQLTLICRSDHRFARA 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V W L G L+ + R L+D AL +G++ E+ T MVA G+GI+ Sbjct: 181 PQVSWANLAGEALIGLAKDNPLRGLVDHALIASGVEVKTRYEVRFSTTAISMVAEGLGIA 240 Query: 241 ILPALALPLPEG-SPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 ILP + L +V + PV+ R + +++ + LS AA + + + Sbjct: 241 ILPENSRQLTTNVDVRIVDLVDPVISRNISILQYRQPMLSPAAAKMKEFLMGASR 295 >UniRef50_Q2RQL6 Transcriptional regulator, LysR family n=2 Tax=Rhodospirillaceae RepID=Q2RQL6_RHORT Length = 301 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 78/298 (26%), Positives = 135/298 (45%), Gaps = 2/298 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++L+QL+ V VA +F RA E +SQ +S + E+E G+ L +RT R VVLT Sbjct: 2 FTLRQLRYIVAVADTLNFRRAAEVCLVSQPTLSVQIAEVEAFLGLTLFERTRRSVVLTPI 61 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+++A R +L E N + + LSG +R+ T+ +L+P ++ ++P + Sbjct: 62 GREIAERARGVLREANEIVDLARSLRAPLSGPLRLGVIATLGPYLLPYVLSAFREKHPSL 121 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L + P + +R G++D +V P L + EP +L D ALA Sbjct: 122 RLYLREDPSLRLERRLRAGELDLILVDMPIDDAGLDIMDLFFEPLWLAAPPDHALADRTR 181 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V + L G L+L + R + R G + + + TL MVA+ IG+++L Sbjct: 182 VSVEDLAGRDLLLLEEGHCLRDEVLDLCRRVGAREHGGFQATSLDTLRQMVASRIGLALL 241 Query: 243 PAL--ALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 P L A + + + + R++ L RK + + + A +A Sbjct: 242 PDLYVAAEAAQDPNIRMIPFSAPPVRRVGLAWRKTSARVAEFREFGAFILARLPASLA 299 >UniRef50_C4L1Y9 Transcriptional regulator, LysR family n=2 Tax=Exiguobacterium RepID=C4L1Y9_EXISA Length = 294 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 62/290 (21%), Positives = 117/290 (40%), Gaps = 1/290 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++++ F+ VA+ KSF+RA E + ++Q +S +++ LE GV L DR R++ LTD Sbjct: 1 MEFREMQYFIAVARAKSFTRAAEALHVTQPTLSKTIRHLEQELGVELFDRQRRQIELTDV 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L L E L+ +L + G +R+ I + + + H YP+I Sbjct: 61 GEALMLESELLIRQLEDLPNHVFDITNSKRGLIRLGLPPLIGSLFFTKFLTVFHSSYPNI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + + + + ++ +G++D I + ++E + LA Sbjct: 121 RVEITEAGGHTLEHALEKGELDV-IATVLPTSSTFEETPFVTEELYAYLPERHPLASRKQ 179 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + L VL ++ A + G ++ E G L VA G ++IL Sbjct: 180 LLLEELASEPFVLFTDEFSLHHVVRTACEQAGFTPRLIGESGQWDFLCMSVAQGNAVTIL 239 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 P + + + + QL L K R L A + ++ Sbjct: 240 PRSIMQEMNIYGVKAILLKQRIPWQLGLATAKGRYLPYATREFIRYLTEE 289 >UniRef50_Q12DG5 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12DG5_POLSJ Length = 289 Score = 284 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 74/288 (25%), Positives = 116/288 (40%), Gaps = 3/288 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL FV VA+E SFSRA R+ +SQ +S + +LE G LL R++ EV LT A Sbjct: 1 MDLRQLSYFVAVAEELSFSRAASRVHISQPPLSRQIAKLEQELGAVLLIRSSHEVALTQA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ L RLL GR + +G +R+ + +P +++ + YP + Sbjct: 61 GQALLEEARRLLALAAGIPEVVGRASRGETGSLRIGFVGSTIYTSVPALLSQYRQIYPHV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + ++ ++D GI+ L ++ E F LA +D Sbjct: 121 AVSVQQLTVARQTVMLKNSEIDVGIIRQAVTEPWLATRSLFKEGFMAALPVHHRLAGQDR 180 Query: 183 VPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V Q+L V A + G IVQE +T+ +VAAG+GI+ Sbjct: 181 VMLQSLAEDDFVFFSRSEAPAIHEQLRKMCEAAGFSPRIVQEAYPMSTVVGLVAAGVGIA 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDV 288 I+P L + L + + L + S D+ Sbjct: 241 IVPESMQRLQMQNVLYRALRGTRAKTEFFLAWHVGNT-SQTLRGFLDM 287 >UniRef50_B6IX78 Hydrogen peroxide-inducible genes activator n=1 Tax=Rhodospirillum centenum SW RepID=B6IX78_RHOCS Length = 312 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 79/304 (25%), Positives = 136/304 (44%), Gaps = 6/304 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L+ L+ V +A+ + F RA E +SQ +S +++LE+ G L +RT++ VV T Sbjct: 1 MNLRDLRYVVAIAEHRHFGRASEACHVSQPTLSGQLRKLEDRLGAPLFERTSKWVVPTAL 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQQ+ L++ ++ L+G +R+ T+S +L+P + E +R+P + Sbjct: 61 GQQVVRHARAALEQADAIEALARAARDPLAGPLRLGVIPTLSPYLMPLVLPELRQRHPGL 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 VL + ++E +R+ ++D ++ DL + EPF LA D+ Sbjct: 121 TLVLWEDLTANLIERLRRHELDAALIATGTDGEDLIGVDLFVEPFLAAVPTGHPLAARDW 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIV--QEIGHPATLFPMVAAGIGIS 240 V LQ A +++ R G TL MV+AG G + Sbjct: 181 VSEDDLQRADMLVLADGHCLREQALGVC---GAPPPGGDDLRAASLDTLVSMVSAGYGCT 237 Query: 241 ILPALALPLPEGSPLVVKRIT-PVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAG 299 ++PALA P E LV++ + R + LV R A +AL ++VR A +A Sbjct: 238 LVPALAAPGLERRGLVLRPVDSFGACRTVRLVWRPTFPRQKALDALAELVRSVVPADLAD 297 Query: 300 REGD 303 + Sbjct: 298 GSPE 301 >UniRef50_B0T3V7 Transcriptional regulator, LysR family n=1 Tax=Caulobacter sp. K31 RepID=B0T3V7_CAUSK Length = 294 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 93/290 (32%), Positives = 149/290 (51%), Gaps = 1/290 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ +L Q++ FVTVA SF+RA E +GLSQ A+++ +++ E G+RL DR+TR V LT Sbjct: 1 MHITLGQIRAFVTVASTFSFTRAAEVLGLSQPALTNRIRQFEESLGLRLFDRSTRSVELT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 + G++L RL+ E + + ++ G VR+A + +A L+P IA P Sbjct: 61 NVGRELLPIFRRLVGEFEGAVINARDYASKVKGVVRLACLPSCAATLLPDLIARFQIDNP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 FV+ D V +R+ VDFGI + G GDL+ + + ++ R+ +A Sbjct: 121 SATFVVEDALNSRVATMVREDRVDFGIGMADGEAGDLELTRLFDDTLQVVHPREHPIAQA 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + + L L+L + S R L++ A G A E+ + +T +V AG+G+S Sbjct: 181 PVIDVETLSHYPLILMNRGSSVRDLVEGAFLAAGRTATPACEVTYMSTAVALVRAGLGLS 240 Query: 241 ILPALALPLPEGSPLVVK-RITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 ILP+ A+ L + + P R L+LVRR+N L EA D + Sbjct: 241 ILPSTAVELRSQPDVAARSIDDPAFVRTLVLVRRRNAPLRPVVEAFIDSI 290 >UniRef50_C8WSN1 Transcriptional regulator, LysR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSN1_ALIAD Length = 290 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 76/293 (25%), Positives = 127/293 (43%), Gaps = 3/293 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L QL+ F+ VA+ +SF RA + I +SQ A+S ++++LE G L RT + V LT Sbjct: 1 MELVQLEYFLAVAEYQSFRRAADAIRVSQPALSRAIQKLEGDLGAPLFVRTAQGVRLTPC 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + L E+ + R + Q G + V ++ +P I R +P + Sbjct: 61 GEAFLPHARQALAEVAAGARKVAELAGQARGVLHVGLIYSLGTRFLPDVIRTFTRTHPGV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + P Q +++ + G++D P L IL E + D LA +D Sbjct: 121 TVRLSEAPTQKLLQQLDAGEIDIAFCT-PQHAPHLTLVEILQEELVAIVPLDHPLAAKDQ 179 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 L G V SG R +I+ A G + E T+ +VAAG+G++++ Sbjct: 180 CHLSDLAGEPFVAYARESGIRHVIERYCAEAGFTPRVAMEGVEDLTVAGLVAAGVGVAVV 239 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 P A L + V++ P +R + + + +LS A A V+ Sbjct: 240 PLHA-QLDQLPVHVLRLCEP-CKRSVYMAWHTHTTLSPVARAFIAFVKRMCAP 290 >UniRef50_Q3SGH4 Oxidative stress transcriptional regulator n=2 Tax=Proteobacteria RepID=Q3SGH4_THIDA Length = 301 Score = 283 bits (726), Expect = 5e-75, Method: Composition-based stats. Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 5/297 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L++L+ V +A F RA E ++QS +S +K+LE+ GV L DR+ + V T Sbjct: 1 MTLQELRYLVALADHGHFGRAAEACFITQSTLSTQIKKLEDFLGVTLFDRSLKRVTPTPI 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+++ ++DE ++ V + T+ + +P + HR++P + Sbjct: 61 GREILQAARTIVDEAERIRTLAKHAQDPMTRTVHLGVIPTLGPYYLPHALTLVHRKHPGL 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + +L + ++E + G +D G++ P L+ E + EPF+ D ALA + Sbjct: 121 RLLLREEMTPQILEHLADGKLDAGLLALPVTDEGLRVEPLFHEPFYAALPADHALAAREA 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + + KL+L D R TL MV G+G+++L Sbjct: 181 LSVADIMAEKLLLLDEGHCLREQALDVCG-ARSSGREEVRATSLETLRQMVGMGLGLTLL 239 Query: 243 PALALPLPEGSPL----VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 PALA+ + +P R + LV R+ E L ++ A Sbjct: 240 PALAVDAAPRQTRKLVEIRPFRSPPPGRTIGLVWRRRAPFPETFERLAATLKASLPA 296 >UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67NJ1_SYMTH Length = 311 Score = 283 bits (726), Expect = 5e-75, Method: Composition-based stats. Identities = 69/302 (22%), Positives = 123/302 (40%), Gaps = 3/302 (0%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 + L+ L F V +E SF+RA + + L+Q +V+ V LE++ V+L R + V LT Sbjct: 10 SMLLQHLTTFCRVVEEGSFTRAAQVLNLTQPSVTKQVGALEDYLQVQLFTRQGKRVHLTP 69 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 G+ + +++ + SG V V TI +P+ +A R +P Sbjct: 70 VGELVYDYARQVIHLVQRCEEAVREYRSPGSGSVTVGCVHTIGLFTLPELLAAYVREHPR 129 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 ++ + + + + G+VD G+V P ++ + +P ++ A + Sbjct: 130 VKINVKTGNNRETVTMLLHGEVDVGLVTTPQVHERIEVVPLFEDPLVVVAGPSFAADLPP 189 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V L + + R D L GIQ V E + + MVA G GI++ Sbjct: 190 VVSNADLAQLPFIGYVRGARFRMTTDQVLEEMGIQPQFVMEFDNHEAIKTMVALGFGIAL 249 Query: 242 LPALALPLPEGSPLVVKRI---TPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 P A+ S +V+ P + R L+ R+ S A A ++ + N + Sbjct: 250 EPVSAVQRELISGQLVRLNVPGLPRLSRTTSLILRRGERRSEAVRAFLSLLEQRYNVTIP 309 Query: 299 GR 300 R Sbjct: 310 TR 311 >UniRef50_Q1GX89 Transcriptional regulator, LysR family n=13 Tax=Proteobacteria RepID=Q1GX89_METFK Length = 330 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 74/295 (25%), Positives = 132/295 (44%), Gaps = 9/295 (3%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N +L +LK V VA+E++F RA E+ +SQ A+S +VK+LE GV + +R+ R+V T Sbjct: 28 NMTLSELKFIVAVAKERNFRRAAEKCFVSQPALSLAVKKLEEELGVTIFERSHRDVATTP 87 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 G+Q+ + R L+E + QL+G ++ + +L+P+ I R P+ Sbjct: 88 IGEQIIAQAIRTLEESDRIKEIARMGNNQLAGPFKLGVIYSTGPYLLPEIIPALRRLAPE 147 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + + + + +R +D I+ P V ++CE + E F + A Sbjct: 148 MPLEVEENLTANLETQLRNRVIDAAIIALPFDVPGVRCEPLYDESFVVAVPDIHPWAERK 207 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAAL---ARNGIQANIVQEIGHPATLFPMVAAGIG 238 + + L K++L + + A +R+G V + T+ MVA+ +G Sbjct: 208 EIRAEELADEKVLLLNSGHCFSNQVVLACPELSRHG----EVLQGNSLETIRNMVASNLG 263 Query: 239 ISILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 I++LP A + PV R++ L RK + A + L +R Sbjct: 264 ITVLPCSAAAGRYQNPLIRTIPFADPVPTRRIALAWRKGYTREKAIDCLLQAIRA 318 >UniRef50_A1TN88 Transcriptional regulator, LysR family n=9 Tax=Burkholderiales RepID=A1TN88_ACIAC Length = 307 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 69/303 (22%), Positives = 124/303 (40%), Gaps = 3/303 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ F +A E F RA R+ +SQ +S ++++LE G +L +RT +EV LT A Sbjct: 1 MELRHLRYFAVLADELHFGRAAARLNMSQPPLSVAIRQLEERVGAQLFERTPKEVRLTPA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L R+L + L + + L+G++R+ + +PQ + +R+P + Sbjct: 61 GRALKASARRVLAQAEEALSEARGVAAGLAGRLRIGFVGAMLYRGLPQALGVFQQRHPGV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + L + + + +D G V LQ +++EPF LA Sbjct: 121 RVSLQELNSGEQIGELLHDRLDLGFVHTSRMPATLQQRLLVTEPFLCCLPAGHRLARRKV 180 Query: 183 VPWQALQGAKLVLQDYA--SGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + + L G VL A I + A G Q I E+ H + +V+ G+G++ Sbjct: 181 IDLRDLAGEPFVLFARAVSPDYHARILSICASAGFQPEIGHEVRHWLAVVSLVSQGLGVA 240 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 ++P + V + + V + L ++ G A +GR Sbjct: 241 LVPQAMEHSRLPGAVFRPVGPAVAQSEAYAVWPA-APENPLVGDLMAILLAGGPAGSSGR 299 Query: 301 EGD 303 Sbjct: 300 REH 302 >UniRef50_C6E9D5 Transcriptional regulator, LysR family n=8 Tax=Desulfuromonadales RepID=C6E9D5_GEOSM Length = 305 Score = 283 bits (725), Expect = 7e-75, Method: Composition-based stats. Identities = 76/294 (25%), Positives = 135/294 (45%), Gaps = 5/294 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +LKQL+VF+ VA+ SFS+ E ++QS VS + LE+ G++LLDRT + + T+ Sbjct: 1 MNLKQLEVFIKVAESGSFSKGAEATFITQSTVSQHISALESEFGMKLLDRTGKGALPTEG 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L R +L++ R ++ +A S ++IP + R+P + Sbjct: 61 GKILLERARKLVEYAKEIPVALARFKGIEEAELNIAGSSIPGEYMIPAALPLLISRFPGV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 VL + V+ + +V+FG+V L + + L+ A + Sbjct: 121 TIVLLQGDSRDVLRKLMAEEVEFGVVGGRFEEESLDFTPLAKDELVLIAPAGHRWAKKSR 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQA---NIVQEIGHPATLFPMVAAGIGI 239 + + L VL++ SG+ AL G+ + +G + V AGIG+ Sbjct: 181 ITKEELMAEPFVLRETGSGTGRATAKALREAGLDPAKLKVAVHLGSNEAVKRAVIAGIGV 240 Query: 240 SILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 S + A+++ L +GS + V+ ++R L RK R LS AA A +++ + Sbjct: 241 SYVSAVSVQRELEQGSLVQVRVAEVEIKRDFFLATRKGRELSPAAIAFKEIMIE 294 >UniRef50_Q1QWP3 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QWP3_CHRSD Length = 296 Score = 282 bits (724), Expect = 8e-75, Method: Composition-based stats. Identities = 79/291 (27%), Positives = 137/291 (47%), Gaps = 1/291 (0%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 + + +QL+VFV V + + + A ++ LSQSA S ++ +LE GV L +R R + L D Sbjct: 4 HVTFRQLQVFVAVIRGGAVNAAARQLRLSQSATSQALADLERQLGVVLFERLGRRLELND 63 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 AG++L E++L+ L+ + +L G + VAAS TI +L+P R+P Sbjct: 64 AGRRLLPYAEKVLNGLDELVDAAREPDGELRGTLHVAASATIGTYLLPMLAGRFIERHPA 123 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + L R + VM I++ D D G++ L E + ++ LA D Sbjct: 124 VDLQLRLRNTEDVMRDIQRFDADLGLIEGQCSESRLVSELWCQDEMVVVAAPQHPLAARD 183 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 + + LQ A+ +L++ SG+R + +AA+ + + + E+ + V AG G+ Sbjct: 184 GLGVEELQAAQWILREPGSGTRAIFEAAIHPHVERIRVRMELDQHEAIKQAVRAGFGLGC 243 Query: 242 LPALALPLPEGSPLVVKRITP-VVERQLMLVRRKNRSLSTAAEALWDVVRD 291 L L++ +V +P + R LV R S +A +RD Sbjct: 244 LSRLSVAGELERGELVALRSPLQLTRSFSLVWHPERYRSPLWQAFKVFLRD 294 >UniRef50_D2QVQ4 Transcriptional regulator, LysR family n=22 Tax=Bacteroidetes RepID=D2QVQ4_9SPHI Length = 298 Score = 282 bits (724), Expect = 8e-75, Method: Composition-based stats. Identities = 73/298 (24%), Positives = 141/298 (47%), Gaps = 7/298 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 + + L VF TVA+ SF++A + ++Q A++ ++ELE+ G L DR ++ LT A Sbjct: 2 FDFR-LTVFYTVARRLSFTKAAAELFVTQPAITKHIQELESQLGTALFDRRGNQISLTTA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G L E ++ D + + G++R+ AS TI+ ++IP +A ++PD+ Sbjct: 61 GNVLLRHAETIMGVYRQIEFDLNELKGKPGGRLRLGASSTIAQYVIPAVLARFGEQFPDV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + + +++ ++D G+V D++ + + L+C D LA D Sbjct: 121 TLSLLSGNTEQIEQALLHDEIDLGLVEGRTHHSDVRYTPFVKDELVLVCRADHPLAGRDE 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQ---ANIVQEIGHPATLFPMVAAGIGI 239 + L+ LVL++ SGSR +++ AL G++ ++G + +++ G+ Sbjct: 181 ITLDELKTVPLVLREPGSGSREVVEHALRGAGLRLAELQQAMQLGSTEGIKTYLSSSSGM 240 Query: 240 SILPALAL--PLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 + + A+ L G+ V+ +ER ++ + S A+ VR Q NA Sbjct: 241 AFVSIFAVPNELKSGTLRVLDVADLTIERDFYAIQLQGMSEG-LADTFMRFVRRQYNA 297 >UniRef50_A1WRQ7 Transcriptional regulator, LysR family n=2 Tax=Burkholderiales RepID=A1WRQ7_VEREI Length = 299 Score = 282 bits (724), Expect = 9e-75, Method: Composition-based stats. Identities = 83/296 (28%), Positives = 129/296 (43%), Gaps = 2/296 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +LKQL+VF + + +SF+ A ++QSAVS ELE+ G L +R+TR V Sbjct: 1 MNITLKQLRVFCALYELRSFTAAARAAFVTQSAVSKLCAELESEVGQPLFERSTRSVTPC 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 + +++L + + R + G V VAAS + L+ +A HR YP Sbjct: 61 EGAADFYTYAQQILSTVRAAERSMSSLRSLERGIVGVAASPMVMYGLLGDPLASYHRNYP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 I+ L++ + +R G VD GIV +L I + + +C D LA E Sbjct: 121 GIKLDLYELSTDETITYVRHGKVDMGIVSLEVKDAELATRPIFRDFMYAVCTSDHPLAQE 180 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + V W L + A R ID + + + E ++ MV +G+GI+ Sbjct: 181 EKVSWSELAKYDHIGLHSAYNVRRSIDRICEQLHLDIHFKIEASMVTSVLGMVRSGLGIT 240 Query: 241 ILPALALPLPEGSPLVVKRITPVV--ERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 ++P LV+ I +L LV+R S AA AL + V Q Sbjct: 241 VVPGYICDFARHLGLVLVEIRGAPKYPVELWLVQRTATRPSLAASALLECVEQQLE 296 >UniRef50_B4SKP4 Transcriptional regulator, LysR family n=24 Tax=Bacteria RepID=B4SKP4_STRM5 Length = 320 Score = 282 bits (723), Expect = 9e-75, Method: Composition-based stats. Identities = 76/301 (25%), Positives = 134/301 (44%), Gaps = 8/301 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L+ LK V +A K F RA +SQ +S +++LE G+ L++R R+V+LT A Sbjct: 1 MNLRDLKYLVALADHKHFGRAAASCFVSQPTLSTQIRKLEEELGLPLVERAPRKVMLTPA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ+ A R ++ E+ R +G VR+ T+ +L+P I R+P++ Sbjct: 61 GQEAAARARVIVSEVEQLKEAARRSRDPEAGTVRLGIFPTLGPYLLPHVIPRIRERFPEL 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + +L + +++ +R+G +D ++ P L E + EPF L LA ++ Sbjct: 121 ELLLVEEKSDVLLDRLREGKLDAALLALPVIDDQLHAEFLFEEPFLLAVSGRHPLARREH 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + Q L KL+L + R G TL MVAA +GI++L Sbjct: 181 LDVQELATQKLLLLEDGHCLRDQALEVCRLFGANEKSEFRATSLETLRQMVAADVGITLL 240 Query: 243 PALALPLPEGSPLVVKRITP----VVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 P+L++ P ++ + R++ ++ R+ S+A + DQ L Sbjct: 241 PSLSVQPPVPRSSNIRLLDFTGEGRPSRRIAMIWRR----SSAMNDFLTELADQFKRLPE 296 Query: 299 G 299 Sbjct: 297 A 297 >UniRef50_B7X0F3 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X0F3_COMTE Length = 307 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 80/306 (26%), Positives = 136/306 (44%), Gaps = 3/306 (0%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 MN +L+QL+VF V + +SF+ A + + ++QSAVS ELE+ G+ L +RTTR V Sbjct: 3 MNVTLRQLRVFCAVYERRSFTSAADDMHMTQSAVSKLCAELESEIGLPLFERTTRRVTPC 62 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 D +L + +L+ + R + G + +AAS + + L+ I R +P Sbjct: 63 DGAAELYEYAQEVLNTMRLAGRRLSALRTLDQGNLSIAASPMMMSGLLAPVIEAFARDHP 122 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++ LH+ ++ +R G DFG+V L+ + + +E L C LA + Sbjct: 123 KVRIDLHELTTDESVDYVRTGRCDFGLVSIAEHDPQLEPKVVCAELLCLACTPSHPLAAK 182 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W + +R ID L G++ + G AT +V A +G++ Sbjct: 183 KRITWGEASDYPHITLRSVYSTRKTIDRILKAQGLELRSTIQAGTLATSLRLVKANLGVT 242 Query: 241 ILPALALPLPEGSPLVVKRITP--VVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 ++P+ A + L V I +L L+ R+ S AA A D ++ A Sbjct: 243 LIPSYAREFAQDLGLKVMEIYDKKPYPHELSLLTRRGLKPSIAATAFMDALQVHLQG-RA 301 Query: 299 GREGDP 304 R P Sbjct: 302 RRRQHP 307 >UniRef50_Q46S95 Transcriptional regulator, LysR family n=2 Tax=Burkholderiaceae RepID=Q46S95_RALEJ Length = 309 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 86/298 (28%), Positives = 138/298 (46%), Gaps = 4/298 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M L QL+ F+ V +E F RA R+ ++QS +S ++ LE GVRL DR +R V LT Sbjct: 1 MIPDLNQLRCFIAVGEELHFGRAATRLFMTQSPLSRQIRMLEESLGVRLFDRNSRVVRLT 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 AG L RLL + R+ + +SGKVRV + L+P IA + + P Sbjct: 61 AAGSALLDDARRLLALAGHAVDVARRIDKGVSGKVRVGFTAVAGYELVPNLIARAMQELP 120 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVI-DPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 +I+ LH+ +E+++ G +D G + P +LQ +SEP L H ALA Sbjct: 121 EIEVTLHEMVTVAQIEALQAGTIDLGFLRPLPDVDPELQWRPAVSEPLLLAMHATHALAA 180 Query: 180 EDYVPWQALQGAKLVLQD--YASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGI 237 + + + L G + LI + LA G +VQ++ ++ +V AG+ Sbjct: 181 RERIAAEDLAGQTFIQYSATEGKYFHDLIGSVLAGAGRPPRVVQQMSQTHSVLALVRAGL 240 Query: 238 GISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 G++++PA A L ++ V +L LV R + + + A D + Sbjct: 241 GLALVPASARHLHFPGVVLRPIWRDDVRAELRLVWR-DANRNPACRVFADFAAMHLAS 297 >UniRef50_D1RNC3 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RNC3_SEROD Length = 310 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 79/300 (26%), Positives = 134/300 (44%), Gaps = 8/300 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ F+ VA+E SF RA ER+ ++Q ++ +++++E GV LL+R R +T+A Sbjct: 2 IELRQLRQFIAVAEEMSFHRAAERLHMAQPPLTAAIRKIEQELGVPLLERGNRITRITEA 61 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ + R L + TL +T R + L+ +R+ + L+P + + +P Sbjct: 62 GQVFLIEARRTLAQFERTLGNTRRAARGLTESLRLTFVDSTVNALLPGILRQFRLEHPLA 121 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPG-PVGDLQCEAILSEPFFLLCHRDSALAVED 181 +F L + + ++R D G+V+ P P LQ + L + L LA + Sbjct: 122 EFHLQEATTAEQLIALRDDRADIGMVVLPVAPQEGLQIQPFLFDRMVLALPDHHPLAAQR 181 Query: 182 YVPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGI 239 V + L +L G I A A G IVQE T+ +VA G+GI Sbjct: 182 QVTLRDLDDEPWLLFPAHYGPGMHAAILQACAVAGFSPRIVQEARQMQTIGGLVAGGVGI 241 Query: 240 SILPALALPLPEGSPLVVKR--ITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALM 297 +++PAL L + + + V L L ++ S +A + +Q A Sbjct: 242 ALMPALFAVLKSPGVVFRELSGVGSPVPYTLALAW---QTPSPLTDAFCRIAAEQAAAYR 298 >UniRef50_Q13QG4 Transcriptional regulator, LysR family n=4 Tax=Burkholderia RepID=Q13QG4_BURXL Length = 302 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 116/293 (39%), Gaps = 4/293 (1%) Query: 1 MN-YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVL 59 MN +L+ L+ FV +A+E +FSRA ER+ ++Q A+S ++ LE G +L+DR R + L Sbjct: 1 MNHMNLRALQCFVILAEELNFSRAAERLHIAQPALSQQIRSLEERLGTQLVDRARRPLSL 60 Query: 60 TDAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRY 119 T+AG L ++L L +G G + + +++ ++P + H + Sbjct: 61 TEAGHYLCSEARQILGTLEQMTVVAQEIGIGRRGWLSIGFTRSSMYSVLPPALKAFHEAF 120 Query: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAV 179 P ++ L + + +++R + GI P V +LSEP LA Sbjct: 121 PQVELKLFEMLTEEQTDALRDMRIHIGIGRQPLAVEGCTSYPLLSEPVMAALEPGHPLAA 180 Query: 180 EDYVPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGI 237 V L L+L + + + + GI + E T +VAAG+ Sbjct: 181 HKKVRIADLADTPLILYPKHQNAQFKRSVLSLYRDAGITPAVAHEAYEIQTAIALVAAGL 240 Query: 238 GISILPALALPLPEGSPLVVKRITPVVE-RQLMLVRRKNRSLSTAAEALWDVV 289 G++ + P R + + S A + Sbjct: 241 GVTFIGESVARHGRTDVAFRHLTGPGSSYRSTLAATFRTDDPSPHLRAFLACL 293 >UniRef50_C1A9Z7 LysR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9Z7_GEMAT Length = 296 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 80/295 (27%), Positives = 134/295 (45%), Gaps = 3/295 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ +L L+ F+ VA +FSRA RIG++Q ++S ++ LE G L +R R V LT Sbjct: 1 MDITL--LRAFLEVADAGAFSRAARRIGIAQPSLSLQIQRLEQQLGTTLFERHGRGVALT 58 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 D G+ L R R++D++ + R + G + V A TI+ +++P + R+P Sbjct: 59 DVGKGLYPRARRIVDDVRAAEEAVRREVAEGFGSITVGAIPTIAPYVLPAALERLQHRHP 118 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + VL + +++ +R+G +D I P G L + + SE + A Sbjct: 119 GARVVLREDYSAVLVDLLREGAIDVAIAALPYDFGTLPQDVLGSEMLLVAVPALHPAARA 178 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + LQ A V D + + ++V T+F MV AG+G+S Sbjct: 179 GKITVAQLQDAPTVTLDPVHCLGEQVAGFCDARQVNPSVVCRSAQLTTVFEMVGAGMGLS 238 Query: 241 ILPALALPLPEGSPL-VVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 I+P +A S VV +ER ++ + ++R+ S A D VR N Sbjct: 239 IVPQMAAAKHNTSRCAVVPLADMALERDIIALWPRDRAPSKVAMTFVDCVRQVVN 293 >UniRef50_Q0RXH6 Transcriptional regulator, LysR family protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RXH6_RHOSR Length = 290 Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 61/288 (21%), Positives = 120/288 (41%), Gaps = 1/288 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++ LK F+ VA+ + RA + + ++Q +S ++ LE + L DR++R V LT+ Sbjct: 1 MEIRHLKYFLAVAEHLHYGRAAKSLNMAQPPLSQQIRRLEKILQMELFDRSSRRVTLTNE 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 GQ L ++ + + + +G++R+ + + + + + YP+ Sbjct: 61 GQFLLEAAREVVGQSDHFENLAKALRMGEAGQLRIGFAASAMNWGLGTKLRQFRTAYPEA 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + H +++ +D + +LQ + EP + D LA + Sbjct: 121 DVIAHQMSVADQATALQDDRIDLAFTVGGLNYENLQVVDLDEEPLRAVIPSDHPLAGMET 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V L V + +I +A R G I + TL MV+AG G+ +L Sbjct: 181 VRLADLSHETFVGYRFDDHLEDIIASACYRAGFTPKISFQGAQSHTLLHMVSAGFGLGLL 240 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 PA + + + PV ++ +VR R L+ AE + ++V+ Sbjct: 241 PACDARMGADGVVFIDLEPPVPTMRISVVRH-WRRLTPLAERMLELVK 287 >UniRef50_B4UKP3 Transcriptional regulator, LysR family n=4 Tax=Anaeromyxobacter RepID=B4UKP3_ANASK Length = 311 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 79/306 (25%), Positives = 128/306 (41%), Gaps = 1/306 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L FV V ++ F+RA + ++Q AVS +V+ LE+ GV LL+R R V T+A Sbjct: 1 MDLRGLGAFVEVVRQGGFTRAAAALHVTQPAVSKAVRALEDEIGVPLLERGARRTVPTEA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + R E +L + + + +G G+ RV +S P +A +RYP I Sbjct: 61 GRAVLARAEGVLAAVRAIEDEVADLGALRRGRARVGLPPMVSGAFFPPVLAAYRQRYPGI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 Q L + + V + G +D G+ + P + + + + H S LA Sbjct: 121 QLELREEGAREVEALVASGALDVGVTVLPTDEARFEALPFVHDVLAAVLHPASPLARRPR 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + L G +L R I A G + E G + M AA +G+++L Sbjct: 181 LALADLAGTPFLLYRADFALRGRILDACRAAGFSPQVASETGQWDFMAAMAAADVGVALL 240 Query: 243 PA-LALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGRE 301 P + L VV P + L L+ R+ +LS AA A + R+ A Sbjct: 241 PRTICRRLDPAQVAVVPLAAPAIGWNLGLIWRREGTLSAAARAFVETAREVLLPRRAAGY 300 Query: 302 GDPLYQ 307 + Sbjct: 301 PAARSR 306 >UniRef50_Q4ZY05 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Pseudomonas syringae pv. syringae B728a RepID=Q4ZY05_PSEU2 Length = 298 Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats. Identities = 76/291 (26%), Positives = 127/291 (43%), Gaps = 2/291 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +L+ L+ FV V ++ SFS+A + + L+QS+VS +VK LE+ G LL R LT A Sbjct: 1 MNLRTLRTFVEVVRQGSFSQAADVVSLTQSSVSKAVKTLEDELGTPLLSRIGHRSELTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + R LL E N L + + G +R+ S L + RYPDI Sbjct: 61 GEIVYRRALTLLAERNDLLTELNDLRGLKGGVLRIGLPPVGSGALFAAMFTQYRARYPDI 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDF-GIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 L + + E + G+V+ ++ + + + EP ++ + LA Sbjct: 121 DIQLTEHGASKLHECLASGEVELAALLKMNSFSEEFDYQDVRIEPVVVVMAENHPLAKRK 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V + L +L + +I A R G+ + G + +V+AG+G++ Sbjct: 181 RVVIEDLAETPFILFEAGFALNTMIKLACDRKGVTPKVTARSGQVDFIVDLVSAGLGVAF 240 Query: 242 LPALALPLP-EGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 LP + +V P + ++L RKN LS AAEA + R+ Sbjct: 241 LPRMLAQKHYHDGIRLVALNEPDTDWHMVLAWRKNAHLSPAAEAWLALARE 291 >UniRef50_A0QTM3 HTH-type transcriptional regulator AlsR n=7 Tax=Actinomycetales RepID=A0QTM3_MYCS2 Length = 304 Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats. Identities = 70/304 (23%), Positives = 125/304 (41%), Gaps = 5/304 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+ L+ F V +E F RA ER+ ++Q +S +++LE G LL RTTR V LT A Sbjct: 1 MELRHLRYFRAVGEELHFGRAAERLHMAQPPLSQQIRQLERELGCTLLTRTTRSVELTPA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G R +LD +++ + R+ + G++ + + + L+PQ + P I Sbjct: 61 GHTYLRRAVEILDAVDAANTEAQRIASGIQGRIAIGCVGSATYSLLPQLVRALGESLPGI 120 Query: 123 QFVLH-DRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 + + + +E++ G +D ++ P + + + + D ALA+ D Sbjct: 121 EVTVRGEMLAPAQIEALLSGGIDLALLRPPVRQEAVLTHTVRRDGLVVALPADHALAIRD 180 Query: 182 YVPWQALQGAKLVLQDYASG---SRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 V L+ V+ G L+ A G I QE+ +TL +VAAG+G Sbjct: 181 AVTVADLRDEDFVV-HTGHGRSVMSNLVATVCADAGFLPRIRQEVSETSTLVTLVAAGLG 239 Query: 239 ISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMA 298 ++I+P L V + L+ + L T + + + + Sbjct: 240 VAIVPDPTTALDIAGVRYVPLRPTDLGVDLVAAHTGDSPLITNVLRVLRTLTEGPKSPTQ 299 Query: 299 GREG 302 G Sbjct: 300 AHPG 303 >UniRef50_C3NNS3 LysR family regulatory protein CidR n=22 Tax=Vibrio RepID=C3NNS3_VIBCJ Length = 302 Score = 280 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 128/294 (43%), Gaps = 4/294 (1%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 ++ L+ FV + ++SF++A ER+ ++Q +S ++ LE LL R R LT+A Sbjct: 11 MDIRALRYFVELVNQQSFTKASERLFVTQPTISKMIRNLEQELEQPLLHREGRRFWLTEA 70 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ + R +++L ++ + + Q G +R+ + H+ + + + YP++ Sbjct: 71 GEIVYQRAQQILTQMQQLDAELTDLNQLHRGHLRLGIPPMVG-HVYARLFRQYRQTYPNV 129 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVID-PGPVGDLQCEAILSEPFFLLCHRDSALAV-E 180 + + + + + ++I GD+D + + P DL A+ P F + D L Sbjct: 130 ELTVVEYGGRKIEQAILDGDIDVAVTMLSPNQHPDLNTVALDHYPIFAVVP-DIPLWRSL 188 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 + W + L + I G + L +V +G+G+ Sbjct: 189 TTLTWAQISQEPFYLFTHEFTLSDHIHTCCQAAGYTPQVAARSSQWDFLVALVKSGVGVC 248 Query: 241 ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGN 294 LPA +G +++ ITP ++ +L +V + R +S AEA + R Q Sbjct: 249 FLPAPLCQRIQGDGVLIYPITPAIDWRLGVVWHRERYVSKTAEAWIALCRRQNR 302 >UniRef50_Q2BJH5 LysR-family transcriptional regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJH5_9GAMM Length = 312 Score = 280 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 149/298 (50%), Gaps = 4/298 (1%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 N S++ L+ FV +A SF+RA E + L+QS ++ ++K+LE+ ++LLDRTTR V+LT Sbjct: 4 NISIRHLRAFVEIASCGSFTRAAENLHLTQSTLTATIKQLEDQACLKLLDRTTRRVLLTG 63 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 G+ E+L+ + ++ D Q G++ VAAS ++ + ++P I H P Sbjct: 64 EGETFLPVAEKLISDFDTAFNDLHATATQQQGQIGVAASPSMISRVLPPIIKAYHLDSPK 123 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 I L D + + + + +VDFG+ + +L +L + + ++ LA + Sbjct: 124 IGIYLRDDNASGIEQRVLENEVDFGLGGNHSNQPELSYTPVLKDRYGVVVPSGHHLAEKA 183 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANI---VQEIGHPATLFPMVAAGIG 238 + W + + +G+R + N + + E+ PA L ++ G+G Sbjct: 184 IIRWDEISSLPQLHLTEDTGTRSQLRKLEKENDLDLQLQGAGIEVSTPAGLAELIKTGLG 243 Query: 239 ISILPALALPLPE-GSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNA 295 IS+LP+LA + P + R++ ++ RK RSLS AAE+L ++ + +A Sbjct: 244 ISLLPSLAASTRSFDELHFIPLDEPALFREICIISRKGRSLSPAAESLLQMINEHFSA 301 >UniRef50_A5G2D8 Transcriptional regulator, LysR family n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G2D8_ACICJ Length = 303 Score = 280 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 69/290 (23%), Positives = 128/290 (44%), Gaps = 1/290 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL FV +A+E+ F+RA R+ + QSA+S S++ LE L R+TR+V LT A Sbjct: 1 MELRQLHHFVALAEERQFTRAARRVNIVQSALSTSIRALERELDAPLFVRSTRDVRLTGA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHL-IPQCIAESHRRYPD 121 G+ + ++ + + G +++ Q++ A L +P +A H+R+P Sbjct: 61 GEIFLEKARLAIEAVRDARSAVAEVQGLKRGTLKIGTVQSLPAFLDLPLLLARFHQRHPG 120 Query: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVED 181 I+ L + + R G +D + DL I + L C R L Sbjct: 121 IEIRLIQGSSSALADRTRAGGIDAAFFPVGTHLTDLVTTMIACDEVVLACPRGHPLEGLT 180 Query: 182 YVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISI 241 V +A++ V + G+R L+D GI + E+ T+ +V+ G+GI++ Sbjct: 181 GVTLEAIKDFPFVDFETGWGTRRLVDGRFGDAGIGRHTAFEVSDLDTMLKLVSLGLGIAL 240 Query: 242 LPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRD 291 LP + + + + +P + +L++ T A ++ + Sbjct: 241 LPETVVVARDPDIGMARLSSPELCWELVVAHLPVAGPGTPVAAFLSLLHE 290 >UniRef50_B6R6F6 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R6F6_9RHOB Length = 320 Score = 280 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 80/296 (27%), Positives = 142/296 (47%), Gaps = 10/296 (3%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M +LKQL+ F T+A+ SFS+A E ++QS +S S+K+LE G LLDR+ R +VLT Sbjct: 7 MLPTLKQLQYFKTLAKHLSFSKAAEACFITQSTLSASIKQLEGILGCELLDRSGRTLVLT 66 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+ + + LL + ++ + L G+ R+ +++ L+P+ + + YP Sbjct: 67 EAGESVLEKASLLLRDAEDLVQGVQAQNKPLCGRFRLGVIPSVAPFLLPRFLPQLRDLYP 126 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 ++Q L + + +M ++R+G +D ++ P + I S+ F+L LA Sbjct: 127 ELQLFLREDISRNLMIALREGRIDAALMALPYDTTGFESAEIGSDAFYLAVPGAHPLAGL 186 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V + L L+L + R + AA + AN + +TL MV GIG++ Sbjct: 187 SEVLMEDLANEVLLLLEDGHCLRNHVLAAAGGRMLTANEDVQATSLSTLVQMVDNGIGVT 246 Query: 241 ILPALALPL---PEGSPLVVKRITPVVERQLMLVRRKN-------RSLSTAAEALW 286 ++P +A+ S ++K P R + +V R+ + L A E Sbjct: 247 LVPRIAVDADIDRGTSLKLIKIADPKARRTIGMVWRRKSSFEGNAKLLCKALERFM 302 >UniRef50_D2Q131 Transcriptional regulator, LysR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2Q131_9ACTO Length = 298 Score = 280 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 65/297 (21%), Positives = 115/297 (38%), Gaps = 12/297 (4%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L+QL+ FV VA+E + RA R+ L+Q ++S + LE GV L R + VLT A Sbjct: 1 MELRQLQSFVVVAEELNVGRAATRLHLTQPSLSRQIAALERDLGVELFARIRKRFVLTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L LL + +RD R + G +R+ Q+ + ++P+ + +P + Sbjct: 61 GESLLADARDLLRRADDAVRDAQRTQRGELGTLRLRFVQSATFEVLPKLLGAFRDSHPQV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPG---------PVGDLQCEAILSEPFFLLCHR 173 L +E+++ G +D G++ P P L + +P + Sbjct: 121 VLDLETMTTLRQVEALKDGRIDVGLLRLPEPGTQLGDTKPAEGLASRVVSRDPLVAVLPA 180 Query: 174 DSALAVEDYVPWQALQGAKLVL--QDYASGSRPLIDAALARNGIQANIVQEIGHPATLFP 231 LA + L V + I G +I Q T+ Sbjct: 181 KHPLARRRRIRLAELAAEDFVFYTRPSGPAVHDRIVGYCRDAGFTPSITQAAADVQTIVS 240 Query: 232 MVAAGIGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDV 288 +VAAG+G+S+L A + + + + +L L + S + + Sbjct: 241 LVAAGLGVSLLIAPTPRTDPEAVVYRELSDDLPPWELSLAWSPDN-RSPVLQRFLQL 296 >UniRef50_A5VFC0 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=A5VFC0_SPHWW Length = 315 Score = 280 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 74/298 (24%), Positives = 123/298 (41%), Gaps = 10/298 (3%) Query: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 + L+ L+ F+ VA E F RA +R+G+SQ +S ++ LE+ GV+L DRT+R V LT+ Sbjct: 11 SMDLRHLRYFLRVADEMHFGRAAQRLGISQPPLSKQIRALEDELGVKLFDRTSRRVRLTE 70 Query: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQT-ISAHLIPQCIAESHRRYP 120 AG+ R L++ + R G++ + + + + + + R YP Sbjct: 71 AGRLFEPEARRALEQADRAARIARLAHSAEIGRLGLGFTTSGPFIPFVARALHRFRRTYP 130 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIV---IDPGPVGDLQCEAILSEPFFLLCHRDSAL 177 D++ +L ++ + +E + +D GIV P + + + E L D L Sbjct: 131 DVELILREQGRDEQIEGVLSRQLDIGIVRDYRTPVLPDGVVAQCLQQEEMILAVRDDHWL 190 Query: 178 AVEDYVP-WQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVA 234 A P L+ LVL +G A G I E ATL +V+ Sbjct: 191 ARRPQPPRIADLRDEPLVLYGPPNGTGFTEHFFALCEEAGFVPKIAHEARSLATLLGLVS 250 Query: 235 AGIGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQ 292 AG G +I+ L + + P L LV LS A + ++ Sbjct: 251 AGFGPTIIAQSMARLHVDNVVNRSFAAPSPS-SLWLVH--GEELSPTGAAFRRTILEE 305 >UniRef50_Q167Q4 Oxidative stress transcription regulator, oxyR, putative n=28 Tax=Alphaproteobacteria RepID=Q167Q4_ROSDO Length = 313 Score = 280 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 80/305 (26%), Positives = 136/305 (44%), Gaps = 7/305 (2%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +LKQL+ F +A+ K F RA + ++Q A+S +KELE G L++R TRE+ LT Sbjct: 4 LTLKQLRYFDALARHKHFGRAADSCAITQPALSLQIKELEALVGAPLVERATREIRLTSL 63 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G R ++L ++ L+G++R+ T + +L+P + +R+ D+ Sbjct: 64 GSDFITRTRKILLSIDELDELARAAQGPLAGRLRLGVIPTAAPYLLPSIMTSFAQRFADL 123 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 L + Q +++ + + +D IV P L+ A+ E F L+ A + Sbjct: 124 DVELRESVTQALIQDLLEARLDLAIVALPISEPALREFALFEEDFVLVRPPQD--AGKPV 181 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 + LQ +L+L + R + + E +TL MV AGIG++++ Sbjct: 182 PSPEMLQEMRLLLLEEGHCFRDQALSFCKSVEAHPRQMMEGSSLSTLVQMVGAGIGVTLI 241 Query: 243 PALALPLP--EGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR 300 P +AL L V + P R + +V RK LS + +VR G R Sbjct: 242 PEMALSLETRSADVAVARFPKPGPSRTIGMVWRKTNPLSDQLMQIGAIVRGVGQ---KAR 298 Query: 301 EGDPL 305 + PL Sbjct: 299 DTHPL 303 >UniRef50_Q11BY5 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11BY5_MESSB Length = 307 Score = 280 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 123/280 (43%), Gaps = 9/280 (3%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 +LKQL+ F +A+E F RA E++ ++QS +S +++ LE G +L R R V LT+ Sbjct: 1 MNLKQLQYFSVLAEELHFRRAAEKLNITQSPLSIAIQNLEQELGAKLFHRNQRSVQLTEV 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLI---PQCIAESHRRY 119 G++L + L+ L +D + +G++R+A T ++ L+ P+ I+ +++ Sbjct: 61 GRRLYDHAQGLISRLEHCEQDIRAIVNGKAGQLRIAF--TAASSLLSPFPKLISAFQKKF 118 Query: 120 PDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGP--VGDLQCEAILSEPFFLLCHRDSAL 177 P+I L + ++ +G +D G++ P ++ + ++ + L Sbjct: 119 PEIDVQLQSMTTVQQISALSEGTIDIGLLRRPRQSIPAEISTRRLATDRLVVALPSGHPL 178 Query: 178 AVEDYVPWQALQGAKLVLQDY--ASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAA 235 + V L K + G + G +IVQE T+ +VAA Sbjct: 179 TSKSVVAIPELAKEKFIFFPRKMGIGIYDQFIKLCGKWGFAPDIVQEAEEATTIVGLVAA 238 Query: 236 GIGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKN 275 G+G++++P + + +L+L R Sbjct: 239 GLGVAVVPGGLRYIQIPNLEFRHIADEDAITELLLAFRTG 278 >UniRef50_P0ACR6 Uncharacterized HTH-type transcriptional regulator yeiE n=127 Tax=Proteobacteria RepID=YEIE_ECO57 Length = 293 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 80/291 (27%), Positives = 135/291 (46%), Gaps = 7/291 (2%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M+ +L+QL+VF V + S ++A + LSQSAVS ++ +LE GV+L DR + +V+ Sbjct: 1 MHITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVN 60 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 + G+ L R LL++ + +G +R+ AS TI +++P IA YP Sbjct: 61 EHGRLLYPRALALLEQAVEIEQLFRE----DNGAIRIYASSTIGNYILPAVIARYRHDYP 116 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 + L Q VM+++ VD G + P ++ E L + + S LA Sbjct: 117 QLPIELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLEDELVVFAAPTSPLA-R 175 Query: 181 DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS 240 V + L A +L++ SG+R ++D L + + + E+G+ + V G+GIS Sbjct: 176 GPVTLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMELGNSEAIKHAVRHGLGIS 235 Query: 241 ILPALALP--LPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVV 289 L + L G+ V P + R L + + + LS A D Sbjct: 236 CLSRRVIEDQLQAGTLSEVAVPLPRLMRTLWRIHHRQKHLSNALRRFLDYC 286 >UniRef50_A9I810 Transcriptional regulator, LysR-family n=5 Tax=Proteobacteria RepID=A9I810_BORPD Length = 329 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 78/301 (25%), Positives = 139/301 (46%), Gaps = 6/301 (1%) Query: 1 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT 60 M + L+ F+ VA+E+ FSRA R+ LSQ +S+++++LE+ G RLL+RT+R V LT Sbjct: 31 MELEPRLLRYFIAVAEERHFSRAAARLHLSQPPLSYAIRQLESTLGTRLLERTSRHVELT 90 Query: 61 DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP 120 +AG+ L + LL + + R+G L G++R+ ++ +P +A P Sbjct: 91 EAGRVLYREAQALLRQSEAIGTLVQRVGAGLRGRLRIGFVGSMLYRGLPDLLAAMRTALP 150 Query: 121 DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE 180 D++ VL + +E++R+G+ D G + ++Q +++EPF L LA Sbjct: 151 DVEHVLTELNSHEQIEAVRRGEQDLGFIHANPAPAEVQTLNLVAEPFVLCVPDTHPLARR 210 Query: 181 DYVPWQALQGAKLVLQDYA--SGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIG 238 V QAL +L A + + G I E+ H ++ +V+ G+G Sbjct: 211 RRVSLQALAHDDFILFARAASPSYHETVLSLCVTAGFHPAIRHEVRHWLSVAALVSQGLG 270 Query: 239 ISILPALALPLPEGSPLVVKRITPVVERQLM-LVRRKNRSLSTAAEALWDVVRDQGNALM 297 +SI+PA + P R + + ++ + + D+VR Q Sbjct: 271 VSIVPACLARSGLAGTRFIAFDHPA--RSVSQAIWPRD-TDAPLLRTAVDLVRAQYQYAA 327 Query: 298 A 298 Sbjct: 328 P 328 >UniRef50_B4DCH5 Transcriptional regulator, LysR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCH5_9BACT Length = 298 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 87/288 (30%), Positives = 146/288 (50%), Gaps = 2/288 (0%) Query: 3 YSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDA 62 L QL+ F+ VA++++F+RA R+ L+Q+A+S +++LE+ L R RE LT A Sbjct: 1 MELYQLQYFLEVARQRNFTRAAARLHLAQAALSEQIRKLEDELATPLFQRGRRESTLTAA 60 Query: 63 GQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDI 122 G+ L E LL+ + + SGK+ + A ++SA L+P + +R+P + Sbjct: 61 GETLRGHAEALLERAAAARHAVQELVGLRSGKLVIGAIPSVSAGLLPAAVTAFRKRHPQV 120 Query: 123 QFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDY 182 + V+ + + V E + G V+ G++ P P G +L+EPF +L A+A Sbjct: 121 ELVIAEGTSEAVAEGVESGRVEMGVIQHPTPAGPFDERTLLTEPFVILAGPHHAIARHRR 180 Query: 183 VPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISIL 242 V +L G V + R AA G + + E G T+ +VAAG+G++IL Sbjct: 181 VSLASLAGEPFVFFKGRA--RESALAACRAAGFEPRLACESGELETVRALVAAGLGVAIL 238 Query: 243 PALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVR 290 P LA + +V+ P VER+L++V R+ + S AA ++R Sbjct: 239 PELAAQRARPACALVRLSEPKVERKLVIVTRRGHAPSPAAAEFETLLR 286 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.202 0.644 Lambda K H 0.267 0.0623 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,882,882,087 Number of Sequences: 3077464 Number of extensions: 200841039 Number of successful extensions: 646604 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 21932 Number of HSP's successfully gapped in prelim test: 2224 Number of HSP's that attempted gapping in prelim test: 585696 Number of HSP's gapped (non-prelim): 26009 length of query: 308 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 180 effective length of database: 646,480,964 effective search space: 116366573520 effective search space used: 116366573520 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.8 bits) S2: 94 (40.2 bits)