BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (782 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P75800 Uncharacterized protein yliE n=57 Tax=cellular o... 1603 0.0 UniRef50_B7LP31 Putative uncharacterized protein yliE n=1 Tax=Es... 586 e-165 UniRef50_UPI0001C33F7C GGDEF family protein n=1 Tax=Enterobacter... 176 3e-42 UniRef50_D2LYI1 Diguanylate cyclase/phosphodiesterase with extra... 173 2e-41 UniRef50_P74101 Uncharacterized protein sll1895 n=1 Tax=Synechoc... 171 1e-40 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 169 4e-40 UniRef50_A0LUT2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ac... 167 1e-39 UniRef50_C7Q6I3 Diguanylate cyclase/phosphodiesterase with PAS/P... 167 1e-39 UniRef50_D2SGK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 166 3e-39 UniRef50_A1S8A3 Diguanylate cyclase/phosphodiesterase with PAS/P... 166 4e-39 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 165 5e-39 UniRef50_A4BJS0 Predicted signal transduction protein containing... 165 8e-39 UniRef50_A8VRD8 Putative diguanylate phosphodiesterase n=1 Tax=B... 164 1e-38 UniRef50_A6X3N7 Diguanylate cyclase/phosphodiesterase n=9 Tax=Pr... 164 1e-38 UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 ... 164 1e-38 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 164 1e-38 UniRef50_A8UR98 Sensory box/GGDEF family protein n=1 Tax=Hydroge... 164 1e-38 UniRef50_A9BLH0 Diguanylate cyclase/phosphodiesterase n=2 Tax=Co... 164 1e-38 UniRef50_Q5E8Q7 GGDEF domain protein n=2 Tax=Vibrio fischeri Rep... 164 1e-38 UniRef50_A3YB63 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 164 2e-38 UniRef50_Q8DKE8 Tlr0911 protein n=1 Tax=Thermosynechococcus elon... 163 2e-38 UniRef50_A8MJT4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Al... 163 3e-38 UniRef50_B0C4Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 162 4e-38 UniRef50_C6XLS7 Diguanylate cyclase/phosphodiesterase with MHYT ... 162 6e-38 UniRef50_A3IK67 Putative uncharacterized protein n=1 Tax=Cyanoth... 162 7e-38 UniRef50_B7VHD8 GGDEF family protein n=52 Tax=Vibrionales RepID=... 161 7e-38 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 161 8e-38 UniRef50_B8GM77 Putative uncharacterized protein n=1 Tax=Thioalk... 161 1e-37 UniRef50_Q98BI1 Mll5564 protein n=2 Tax=Mesorhizobium RepID=Q98B... 161 1e-37 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 161 1e-37 UniRef50_A3YB61 Sensory box protein n=1 Tax=Marinomonas sp. MED1... 160 1e-37 UniRef50_B5FFC2 Sensory box/ggdef family protein n=2 Tax=Vibrio ... 160 2e-37 UniRef50_B2UGH6 Diguanylate cyclase/phosphodiesterase with PAS/P... 160 2e-37 UniRef50_B4REU2 Diguanylate phosphodiesterase n=1 Tax=Phenylobac... 160 2e-37 UniRef50_B1Y3Y1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Le... 160 2e-37 UniRef50_A0LW67 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ac... 160 2e-37 UniRef50_B0UKA4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Me... 160 2e-37 UniRef50_B6ISE7 Sensory box-containing diguanylate cyclase, puta... 160 2e-37 UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/P... 159 3e-37 UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curviba... 159 3e-37 UniRef50_C7R6X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 159 3e-37 UniRef50_C8SP16 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 159 3e-37 UniRef50_C7RT49 Response regulator receiver modulated diguanylat... 159 3e-37 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 159 3e-37 UniRef50_C9YBK5 Putative uncharacterized protein n=1 Tax=Curviba... 159 4e-37 UniRef50_P64825 Uncharacterized protein Rv1354c/MT1397 n=32 Tax=... 159 4e-37 UniRef50_UPI0001C42D3B diguanylate cyclase/phosphodiesterase wit... 159 5e-37 UniRef50_B5ZWQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 159 5e-37 UniRef50_B8KDR3 Sensory box/ggdef family protein n=1 Tax=Vibrio ... 159 5e-37 UniRef50_B0CE49 Diguanylate cyclase/phosphodiesterase with PAS/P... 159 6e-37 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 159 6e-37 UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=... 159 6e-37 UniRef50_B6A161 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 158 8e-37 UniRef50_C9RWE1 Diguanylate cyclase/phosphodiesterase with PAS/P... 158 8e-37 UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling p... 158 8e-37 UniRef50_A6FA54 Sensory box/GGDEF family protein n=1 Tax=Moritel... 158 9e-37 UniRef50_A1U2P2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 158 9e-37 UniRef50_B9Z5M4 Diguanylate cyclase/phosphodiesterase with GAF s... 157 1e-36 UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio... 157 1e-36 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 157 1e-36 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 157 1e-36 UniRef50_C5T9I2 Diguanylate cyclase/phosphodiesterase (Fragment)... 157 1e-36 UniRef50_A5V028 Response regulator receiver modulated diguanylat... 157 2e-36 UniRef50_B4B5G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 157 2e-36 UniRef50_A0LUZ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 157 2e-36 UniRef50_B8DLW6 Response regulator receiver modulated diguanylat... 157 2e-36 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 156 2e-36 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 156 2e-36 UniRef50_B1XX17 Diguanylate cyclase/phosphodiesterase with PAS/P... 156 3e-36 UniRef50_A1WTZ5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ha... 156 3e-36 UniRef50_A1VBK7 Diguanylate cyclase/phosphodiesterase with PAS/P... 156 3e-36 UniRef50_A0XYD8 GGDEF/EAL domain protein n=1 Tax=Alteromonadales... 156 3e-36 UniRef50_B1J7P7 Diguanylate cyclase/phosphodiesterase with PAS/P... 156 3e-36 UniRef50_Q2BPB1 Regulatory component of sensory transduction sys... 156 3e-36 UniRef50_B0CC56 Diguanylate cyclase/phosphodiesterase with GAF d... 156 3e-36 UniRef50_A6FHU8 GGDEF family protein n=1 Tax=Moritella sp. PE36 ... 156 3e-36 UniRef50_A4W933 Diguanylate cyclase/phosphodiesterase n=3 Tax=En... 156 4e-36 UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF s... 156 4e-36 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 4e-36 UniRef50_Q2B961 Putative uncharacterized protein n=1 Tax=Bacillu... 155 5e-36 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 155 5e-36 UniRef50_Q07PV4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 155 5e-36 UniRef50_C5SBB5 Response regulator receiver modulated diguanylat... 155 5e-36 UniRef50_A6T018 Signal transduction protein n=4 Tax=cellular org... 155 5e-36 UniRef50_Q3AAV9 Sensory box/GGDEF domain/EAL domain protein n=6 ... 155 5e-36 UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 ... 155 6e-36 UniRef50_A6CPZ0 Putative uncharacterized protein n=1 Tax=Bacillu... 155 6e-36 UniRef50_Q31E09 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 155 6e-36 UniRef50_Q47EJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 155 6e-36 UniRef50_A0YEH3 Sensory box/GGDEF family protein n=1 Tax=marine ... 155 7e-36 UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Cauloba... 155 7e-36 UniRef50_C5BT20 Ggdef domain/eal domain protein n=1 Tax=Teredini... 155 7e-36 UniRef50_B1WPA8 Putative uncharacterized protein n=1 Tax=Cyanoth... 155 7e-36 UniRef50_A6F781 Putative uncharacterized protein n=1 Tax=Moritel... 155 7e-36 UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/P... 155 8e-36 UniRef50_B8H226 CHASE4-family GGDEF/EAL protein n=2 Tax=Caulobac... 155 8e-36 UniRef50_B6ARH3 Putative diguanylate cyclase/phosphodiesterase w... 154 9e-36 UniRef50_B8HQZ5 Diguanylate cyclase/phosphodiesterase with extra... 154 9e-36 UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 9e-36 UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 9e-36 UniRef50_Q4ZXA9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group Rep... 154 1e-35 UniRef50_C9QFQ1 Sensory box/GGDEF family protein n=1 Tax=Vibrio ... 154 1e-35 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 1e-35 UniRef50_D2LS52 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 1e-35 UniRef50_A2SC87 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 154 2e-35 UniRef50_A1TV44 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 154 2e-35 UniRef50_A0LT36 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ac... 154 2e-35 UniRef50_B8DMV5 Diguanylate cyclase/phosphodiesterase with PAS/P... 154 2e-35 UniRef50_C1DLU9 Cyclic di-GMP signal transduction protein n=1 Ta... 154 2e-35 UniRef50_Q2BLE3 C-di-GMP phosphodiesterase A-related protein n=1... 154 2e-35 UniRef50_C6BSB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 153 2e-35 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 153 2e-35 UniRef50_A0YP30 Putative uncharacterized protein n=1 Tax=Lyngbya... 153 2e-35 UniRef50_B9R2A8 Cyclic diguanylate phosphodiesterase domain prot... 153 2e-35 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 153 2e-35 UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 153 3e-35 UniRef50_C3J4U2 Diguanylate phosphodiesterase n=1 Tax=Geobacillu... 153 3e-35 UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum... 153 3e-35 UniRef50_C6WMG3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ac... 152 4e-35 UniRef50_B9JAE4 GGDEF family protein n=1 Tax=Agrobacterium radio... 152 4e-35 UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 152 4e-35 UniRef50_Q89U68 Blr1551 protein n=1 Tax=Bradyrhizobium japonicum... 152 4e-35 UniRef50_C5D592 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 4e-35 UniRef50_B6A3D2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 152 4e-35 UniRef50_A7T9P7 Predicted protein n=1 Tax=Nematostella vectensis... 152 5e-35 UniRef50_Q8DIH6 Tlr1612 protein n=1 Tax=Thermosynechococcus elon... 152 5e-35 UniRef50_D2L6G6 Response regulator receiver modulated diguanylat... 152 5e-35 UniRef50_A5ETN6 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 5e-35 UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 6e-35 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 6e-35 UniRef50_C5RNC8 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 6e-35 UniRef50_A5VAG3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sp... 152 6e-35 UniRef50_Q2BL49 Sensory box/GGDEF domain/EAL domain protein n=2 ... 152 6e-35 UniRef50_Q07T95 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 152 6e-35 UniRef50_D0J4K1 Diguanylate cyclase/phosphodiesterase with n=1 T... 152 6e-35 UniRef50_A6QAC1 Putative uncharacterized protein n=1 Tax=Sulfuro... 152 7e-35 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 7e-35 UniRef50_B1M2I6 Diguanylate cyclase/phosphodiesterase with PAS/P... 152 7e-35 UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplast... 151 8e-35 UniRef50_B6A2R7 Diguanylate cyclase/phosphodiesterase n=10 Tax=R... 151 8e-35 UniRef50_A2SL43 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 151 9e-35 UniRef50_Q7NSJ7 Putative uncharacterized protein n=1 Tax=Chromob... 151 9e-35 UniRef50_Q1GPI8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sp... 151 9e-35 UniRef50_B7L1R8 Diguanylate cyclase/phosphodiesterase with PAS/P... 151 1e-34 UniRef50_B2JE89 Diguanylate cyclase/phosphodiesterase n=58 Tax=B... 151 1e-34 UniRef50_B4B330 Diguanylate cyclase/phosphodiesterase with PAS/P... 151 1e-34 UniRef50_B8H975 Diguanylate cyclase/phosphodiesterase with extra... 151 1e-34 UniRef50_Q3A5U6 Response regulator receiver modulated diguanylat... 151 1e-34 UniRef50_B0C9M5 Diguanylate cyclase/phosphodiesterase with respo... 151 1e-34 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 151 1e-34 UniRef50_C6X941 Response regulator receiver modulated diguanylat... 151 1e-34 UniRef50_B9YZY8 Diguanylate cyclase/phosphodiesterase with PAS/P... 150 1e-34 UniRef50_A9CI56 GGDEF family protein n=5 Tax=Rhizobiales RepID=A... 150 1e-34 UniRef50_A4XG32 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 150 1e-34 UniRef50_A3UFJ0 Putative uncharacterized protein n=1 Tax=Oceanic... 150 1e-34 UniRef50_Q0A7B5 Diguanylate cyclase/phosphodiesterase with PAS/P... 150 2e-34 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 150 2e-34 UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacter... 150 2e-34 UniRef50_Q2BPW4 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax... 150 2e-34 UniRef50_A6F6X6 PAS:GGDEF n=1 Tax=Moritella sp. PE36 RepID=A6F6X... 150 2e-34 UniRef50_Q1H236 Response regulator receiver modulated diguanylat... 150 2e-34 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 150 2e-34 UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/P... 150 2e-34 UniRef50_A4BCU3 Response regulator/sensory box/GGDEF domain/EAL ... 150 2e-34 UniRef50_Q30T73 Diguanylate cyclase/phosphodiesterase with PAS/P... 150 2e-34 UniRef50_A8IKF7 Putative cylclic diguanylate phosphodiesterase n... 150 2e-34 UniRef50_A0YU61 Putative diguanylate cyclase/phosphodiesterase (... 150 2e-34 UniRef50_Q31K70 Diguanylate cyclase/phosphodiesterase n=4 Tax=Sy... 150 3e-34 UniRef50_A1ASF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 150 3e-34 UniRef50_B6IMZ9 Diguanylate cyclase, putative n=1 Tax=Rhodospiri... 149 3e-34 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 149 3e-34 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 149 3e-34 UniRef50_A4XWY6 Diguanylate phosphodiesterase n=1 Tax=Pseudomona... 149 3e-34 UniRef50_Q1YJA6 Putative diguanylate cyclase n=1 Tax=Aurantimona... 149 3e-34 UniRef50_B5XR93 Diguanylate cyclase/cyclic diguanylate phosphodi... 149 3e-34 UniRef50_B3E3S5 Diguanylate cyclase/phosphodiesterase with PAS/P... 149 3e-34 UniRef50_B8DNW4 Diguanylate cyclase/phosphodiesterase with PAS/P... 149 4e-34 UniRef50_Q1JXT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 149 4e-34 UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/P... 149 4e-34 UniRef50_Q11CC0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ch... 149 4e-34 UniRef50_Q4KBF3 Response regulator/GGDEF domain/EAL domain prote... 149 4e-34 UniRef50_A5N6D2 Predicted signal transduction protein containing... 149 4e-34 UniRef50_C6PYP8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Cl... 149 4e-34 UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuni... 149 5e-34 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 149 5e-34 UniRef50_B1XYJ0 Response regulator receiver modulated diguanylat... 149 5e-34 UniRef50_Q21L06 Response regulator receiver modulated diguanylat... 149 5e-34 UniRef50_Q2YZH5 Putative uncharacterized protein n=1 Tax=uncultu... 149 5e-34 UniRef50_B9K4C5 GGDEF family protein n=1 Tax=Agrobacterium vitis... 149 5e-34 UniRef50_Q1YF74 Possible signaling protein with EAL, GGDEF domai... 149 6e-34 UniRef50_Q21UE9 Diguanylate cyclase/phosphodiesterase with PAS/P... 149 6e-34 UniRef50_A6G7D3 Putative uncharacterized protein n=1 Tax=Plesioc... 149 6e-34 UniRef50_B6R112 Putative uncharacterized protein n=1 Tax=Pseudov... 149 6e-34 UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 149 6e-34 UniRef50_A4JQX8 Diguanylate cyclase/phosphodiesterase with PAS/P... 148 6e-34 UniRef50_A4SJC3 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4S... 148 7e-34 UniRef50_B7KGZ9 Response regulator receiver modulated diguanylat... 148 7e-34 UniRef50_B5VW83 Diguanylate cyclase/phosphodiesterase n=4 Tax=Ar... 148 7e-34 UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 148 7e-34 UniRef50_A4VKZ2 Sensory box protein/GGDEF domain protein n=1 Tax... 148 7e-34 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 148 7e-34 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 148 7e-34 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 148 8e-34 UniRef50_Q0G4W7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Fu... 148 8e-34 UniRef50_B8INP3 Diguanylate cyclase/phosphodiesterase with PAS/P... 148 9e-34 UniRef50_Q07VI3 Diguanylate cyclase/phosphodiesterase with PAS/P... 148 9e-34 UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 148 9e-34 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 148 9e-34 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 148 9e-34 UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanoth... 148 9e-34 UniRef50_A1T0Y1 Response regulator receiver modulated diguanylat... 148 1e-33 UniRef50_Q1K1L5 Diguanylate cyclase/phosphodiesterase with PAS/P... 148 1e-33 UniRef50_B9ZPK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 148 1e-33 UniRef50_Q55434 Phytochrome-like protein cph2 n=1 Tax=Synechocys... 147 1e-33 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 147 1e-33 UniRef50_C4XGB8 Putative response regulator receiver protein n=1... 147 1e-33 UniRef50_Q7MI32 C-di-GMP phosphodiesterase A-related protein n=4... 147 1e-33 UniRef50_B1XNC7 Sensory box/GGDEF family protein n=1 Tax=Synecho... 147 1e-33 UniRef50_C6P3U3 Response regulator receiver modulated diguanylat... 147 1e-33 UniRef50_A6WAT4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 147 1e-33 UniRef50_A1KBA9 Conserved hypothetical signaling protein n=1 Tax... 147 1e-33 UniRef50_C6MET2 Diguanylate cyclase/phosphodiesterase with PAS/P... 147 1e-33 UniRef50_B6R9S7 Response regulator receiver modulated diguanylat... 147 1e-33 UniRef50_C4XMU6 GGDEF domain protein n=2 Tax=Desulfovibrio RepID... 147 1e-33 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 147 1e-33 UniRef50_Q0C635 Putative diguanylate cyclase n=1 Tax=Hyphomonas ... 147 1e-33 UniRef50_A6SW06 Sensory box protein n=2 Tax=Betaproteobacteria R... 147 1e-33 UniRef50_B8DJE3 Diguanylate cyclase/phosphodiesterase with PAS/P... 147 1e-33 UniRef50_C5T9Y9 Diguanylate cyclase/phosphodiesterase with extra... 147 1e-33 UniRef50_A3JFU9 Predicted signal transduction protein n=1 Tax=Ma... 147 1e-33 UniRef50_C1DJP1 Cyclic di-GMP signal transduction protein n=1 Ta... 147 1e-33 UniRef50_C9NJG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 147 1e-33 UniRef50_C1CX76 Putative diguanylate cyclase/phosphodiesterase; ... 147 2e-33 UniRef50_A6W5K6 Diguanylate cyclase/phosphodiesterase with PAS/P... 147 2e-33 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 147 2e-33 UniRef50_A1S1U8 Diguanylate cyclase/phosphodiesterase with PAS/P... 147 2e-33 UniRef50_C6X759 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 147 2e-33 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 147 2e-33 UniRef50_Q1YLJ5 Possible signaling protein with EAL domain n=2 T... 147 2e-33 UniRef50_B8GPC4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 147 2e-33 UniRef50_B8GNC0 Signal transduction protein containing a membran... 147 2e-33 UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 147 2e-33 UniRef50_C7MR68 PAS domain S-box/diguanylate cyclase (GGDEF) dom... 147 2e-33 UniRef50_A5PE71 Sensory box/GGDEF family protein n=1 Tax=Erythro... 147 2e-33 UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira b... 147 2e-33 UniRef50_A3ITH6 Putative diguanylate cyclase/phosphodiesterase (... 147 2e-33 UniRef50_Q7MDD2 Predicted signal transduction protein n=2 Tax=Vi... 147 2e-33 UniRef50_A1S1N8 GGDEF domain protein n=1 Tax=Shewanella amazonen... 147 2e-33 UniRef50_B7KJT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 147 2e-33 UniRef50_B1KIP0 Diguanylate cyclase/phosphodiesterase n=3 Tax=Sh... 147 2e-33 >UniRef50_P75800 Uncharacterized protein yliE n=57 Tax=cellular organisms RepID=YLIE_ECOLI Length = 782 Score = 1603 bits (4150), Expect = 0.0, Method: Compositional matrix adjust. Identities = 782/782 (100%), Positives = 782/782 (100%) Query: 1 MLSLYEKIKIRLIILFLLAALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKD 60 MLSLYEKIKIRLIILFLLAALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKD Sbjct: 1 MLSLYEKIKIRLIILFLLAALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKD 60 Query: 61 IERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVV 120 IERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVV Sbjct: 61 IERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVV 120 Query: 121 YHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLH 180 YHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLH Sbjct: 121 YHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLH 180 Query: 181 INGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYN 240 INGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYN Sbjct: 181 INGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYN 240 Query: 241 SEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLV 300 SEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLV Sbjct: 241 SEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLV 300 Query: 301 VYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAE 360 VYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAE Sbjct: 301 VYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAE 360 Query: 361 IERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIV 420 IERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIV Sbjct: 361 IERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIV 420 Query: 421 RKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKS 480 RKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKS Sbjct: 421 RKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKS 480 Query: 481 AICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEI 540 AICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEI Sbjct: 481 AICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEI 540 Query: 541 GELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKT 600 GELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKT Sbjct: 541 GELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKT 600 Query: 601 AMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETV 660 AMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETV Sbjct: 601 AMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETV 660 Query: 661 IERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG 720 IERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG Sbjct: 661 IERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG 720 Query: 721 KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLV 780 KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLV Sbjct: 721 KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLV 780 Query: 781 KE 782 KE Sbjct: 781 KE 782 >UniRef50_B7LP31 Putative uncharacterized protein yliE n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LP31_ESCF3 Length = 782 Score = 586 bits (1510), Expect = e-165, Method: Compositional matrix adjust. Identities = 300/773 (38%), Positives = 476/773 (61%), Gaps = 1/773 (0%) Query: 1 MLSLYEKIKIRLIILFLLAALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKD 60 M S+ EK+ +A +I L + + A + + EL++ N+ +F Sbjct: 1 MYSISEKVNSSFKFAITVAIAVYILLSLFTAFDFHKKIAESSSKNHQELLRNNLRNYFSK 60 Query: 61 IERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVV 120 +E+ A LKD+LYLL++ EEI+RA+I +M + ++ VGL++++ KYY F R +I + Sbjct: 61 VEKEADALKDALYLLQDEEEIKRALIHRMAKIEGINLVGLMMNNGKYYSFIRTPGGEIKL 120 Query: 121 YHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLH 180 + PL G VI +FNP RPW+ + + W Y+C+ PGKKC +F+L Sbjct: 121 QAKFVPGRPLTGADGEVIDENFNPLSRPWNDIPPGAVSKWASWYDCYGMPGKKCFTFSLS 180 Query: 181 INGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYN 240 + + + A+ IH+DL+ +YL +L+ +++FL+ II N+ + LI+ + Sbjct: 181 PSENEKNNFAIKLIHLDLDEKYLTNFLNAQGKPGDIIFLENNGRIIGGNEESTLHLIVKD 240 Query: 241 SEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLV 300 + G Y + D EY EK +P + +++Y + L+ +K F L F I+ + Sbjct: 241 TNGEYRTSNDTD-EYFEKVIILPKLPDVKFHYFYSLNSKLSYLNKSFVLMFMSGIVCFFL 299 Query: 301 VYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAE 360 ++ + + R+ E +LV L L +S + + + I D++EI+ +K I + + Sbjct: 300 LWYIIIVITRKISGESGKLVRNLEHLGNSVYKEDKVDISTEDSREIVELKKIINTIGEKY 359 Query: 361 IERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIV 420 ER ++L+L+SY+Q + F N A+IE+NN Y+A G+I L GLE EA++G ++ N I+ Sbjct: 360 KERIERMLNLVSYEQGTSFYINTAVIETNNKDYVAAGMICLYGLEFAEAIYGSEKYNAII 419 Query: 421 RKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKS 480 +L +I+ KY+ CDI+ + D YLLLC + + F +++N ++ F RN+ +HK+ Sbjct: 420 SELKSKISAKYSSHCDIIKISNDRYLLLCYTDCEEFISNFSVLNLPENIFCLRNIYVHKT 479 Query: 481 AICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEI 540 A+CE G++ Y KLKLA++++R++ SEF++ DD KL+E+++ +W+A NI+HA+ Sbjct: 480 ALCETFSGKDVSIYEGKLKLAMTAMRENKQSEFLYYDDIKLHELDQKVWVASNIKHAISR 539 Query: 541 GELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKT 600 GE +LVYQPIV+I++ ++GAEALCRW SAE G ISP F++IAEDIG I ELG I++ Sbjct: 540 GEFYLVYQPIVNIDSNEVVGAEALCRWNSAEYGFISPAVFVSIAEDIGLIKELGDYILEN 599 Query: 601 AMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETV 660 A+ EF FS + D+FLLHINVSPWQLN+ FH R ++K+ + A +C+EITE+ Sbjct: 600 AIREFSQFSNEYVISDEFLLHINVSPWQLNDFDFHHRVLQLIKDFNINAGQICLEITESA 659 Query: 661 IERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG 720 ++ IN+ FY NI L+ G++I++DDFG+GL++LK+ Y++ PDSIK+DS+FT +F Sbjct: 660 VKEINDSFYNNIIVLKGNGIKIALDDFGSGLADLKKLYKVKPDSIKIDSEFTSGVFDETN 719 Query: 721 KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 +IV I AR +PVIAEGVE+E A+EL KLG Q QGYLYQKP+PFS W Sbjct: 720 RIVWFISSFAREENLPVIAEGVETEHQAKELQKLGFSQVQGYLYQKPLPFSEW 772 >UniRef50_UPI0001C33F7C GGDEF family protein n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001C33F7C Length = 855 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 209/869 (24%), Positives = 365/869 (42%), Gaps = 134/869 (15%) Query: 4 LYEKIKIRLIILFLLAALS--FIGLFFIINY---QLVSERAVKRADSRFELIQKNVGYFF 58 +Y + I+LFL + F +FF++ + +++ + K S+ E I+ + Y+ Sbjct: 9 IYPLTLLHTILLFLAITFATVFCTVFFMLKHASQDILNTMSDKIISSKGETIKNTINYYI 68 Query: 59 KDIERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSV------------GLVLDD-- 104 D R ++ + L KNT E V ++ E++ +++V G V D Sbjct: 69 -DTPRQVNSII-THALQKNTREHVDLVKVRSELLNVMETVFADNYYLSSTAFGSVEGDYV 126 Query: 105 ---------NKYYLFSR-RANDKIVVYHQEQVNGPLVDESGRVIFADFNPSKRPW-SVAS 153 NK YL + ++ + ++ +D+ + + ++ +RPW + Sbjct: 127 GIARELSAQNKEYLTQKSKSTGNNLTFYSGTSEASGIDD----VISGYDMFQRPWYAQVY 182 Query: 154 DDSNNSWNPAYNCFDRPGKKCISF---TLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQI 210 + +SW AY + IS+ T +NGK + + DL LN+ L++I Sbjct: 183 KEKKSSWTNAYRDMNSTSAVSISYSSPTYDLNGK-----FIGVVSSDLRLTELNKSLEKI 237 Query: 211 SANDE--VLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVP----- 263 D ++ + + ++I+A + L + G D Y+ K S++P Sbjct: 238 KPFDGSILIVVNENNQIVAASD---SSLTRGDKHGRLTDQHGFDIPYL-KDSSLPVVKKV 293 Query: 264 -------------------------------NNAL--FEIYFYYPGGNLLNASDKLFYLP 290 NN L ++ P +L + YL Sbjct: 294 GQLIDHKLPARVSRISVHDSQYFVLVLPLMDNNHLLNWKSVIIVPEKIMLKELENFKYLG 353 Query: 291 FAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAK----EI 346 F + + + ++ V + S + ++N TD++ + + + K EI Sbjct: 354 FLGLFGIFSLGLILILVVVSKVISPLRAILN-------KTDELTSYRWTLPEDKWVFPEI 406 Query: 347 ISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII--ESNNNQYLAVGIIKLCGL 404 ++ S ++ + + L I+ D +G + + E Q + +I + + Sbjct: 407 AQLEQSFWKLSRHLAKSFDALEKQINLDATTGLLTRAGLTSKEETFAQRNLLAVISVDNM 466 Query: 405 EAVEAVFGVDERNKIVRKLCQRIAEKYAQ----CCDIV-TFNADLYLLLCRENVQ----- 454 A+ G + N+ +R ++ + Q C D V F A + +V+ Sbjct: 467 NAITNSLGYEYGNEFIRAFIDKMQTTFPQGTLICRDAVDKFIAIFPGMHQHADVEWYQQL 526 Query: 455 ---TFTRKIAMVNDFDSSF---GYRNL---RIHKSAICEPLQGEN-AWSYAEKLKLAISS 504 FT K F GY R+ KS + E + A YA K ++ Sbjct: 527 ITNLFTDKYHPKESLPKKFVFTGYAGAVLSRVTKSTLTEAIMNAGIALEYARK----STT 582 Query: 505 IRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEAL 564 +F+E + + ++ EN+ +R I + E LV QPIVD++T E L Sbjct: 583 CHAMLFTESMHAQEVYNLQLHENL--SRGIYNQ----EFHLVLQPIVDLSTGQCTEGECL 636 Query: 565 CRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINV 624 RW S E GI+ P +FI +AE+ G I LG II+ A E R + DDF LHIN+ Sbjct: 637 IRWHSKEMGIVPPDRFIALAEETGLILPLGNWIIERACLELADLITRGA-SDDFKLHINI 695 Query: 625 SPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISI 684 S QL F +K NGLK ++C+EITETV+ + E ++ LR+ G+ ++I Sbjct: 696 SARQLLSADFAWFLLDAIKSNGLKNQNICIEITETVLLQEIERTRKTLQYLRRHGITVAI 755 Query: 685 DDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNRIPVIAEGV 742 DDFG+G S+L + D++K+D FT + I+ I L +P+IAEG+ Sbjct: 756 DDFGSGFSSLSYLNILPFDAVKIDRTFTAGVLTDQKCESIISSIVTLTNGFSVPLIAEGI 815 Query: 743 ESEDVARELIKLGCVQAQGYLYQKPMPFS 771 E + +LI LGC++AQGY ++KP PFS Sbjct: 816 EDDATRLKLIGLGCMKAQGYYFKKPAPFS 844 >UniRef50_D2LYI1 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LYI1_BACS4 Length = 774 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 118/393 (30%), Positives = 197/393 (50%), Gaps = 21/393 (5%) Query: 390 NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC 449 N+Q LA+ + L + + G ++++ + R+ + + C + D +L+L Sbjct: 385 NDQSLALMFMDLDRFKILNDTMGHQIGDQLLIQTAIRLQQHVCENCTVGRLGGDEFLILS 444 Query: 450 R----ENVQTFTRKIA--MVNDF--DSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKLA 501 + E V +KI M N F +S + + I S P G+ + A Sbjct: 445 KDASIEKVSNIAKKILKDMANPFIINSKEFFTSPSIGISVY--PKDGQTKDDIIKHADTA 502 Query: 502 ISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGA 561 + +++ + + F N + + I ++R A++ E L YQP VD+ + ++G Sbjct: 503 MYVAKENGGNNYQFYTPEPTNLLSKKYIIENDLRKALKNEEFLLYYQPQVDLKSGDLVGL 562 Query: 562 EALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLH 621 EAL RW + G+I P+ FI IAE+ G+IN +G +IK A + + + Q S + Sbjct: 563 EALIRWQHPKLGLIPPMDFIPIAEETGYINHIGKWLIKEACRQNKQWQQNGSFY--IPVA 620 Query: 622 INVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIE---QLRKQ 678 +NVSPWQ + +F E + E L L +EITE+++ HF I+ Q+++ Sbjct: 621 VNVSPWQFRDKNFVENIKAALDETNLDPKYLELEITESMM----HHFIDTIDKVHQVKEM 676 Query: 679 GVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIP 736 G++++IDDFGTG S+L ++ D++K+D F D+ K IV+ I DL + Sbjct: 677 GIKVAIDDFGTGYSSLNAIDQLPIDTLKIDRSFIRDMITNDSKAAIVKTIIDLGNNLHLN 736 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 IAEGVE E+ A L CV+AQGYL+ KP+P Sbjct: 737 TIAEGVEYEEQATFLANQDCVKAQGYLFSKPLP 769 >UniRef50_P74101 Uncharacterized protein sll1895 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Y1895_SYNY3 Length = 696 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 114/404 (28%), Positives = 203/404 (50%), Gaps = 18/404 (4%) Query: 379 FIKNMAIIESN-NNQYLAVGIIKLC--GLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCC 435 F + + + SN NQ +G++ L L+++ + G +++++ + +R++ Sbjct: 277 FKQELGKVLSNVQNQSSVLGLVLLGFRELQSLNDLLGHSVADEVLKIITERLSAHVRLED 336 Query: 436 DIVTFNADLYLLL---CR--ENVQTFTRKIAMVNDFDSSFGYRN----LRIHKSAICEPL 486 + + D ++LL CR + ++ F R++ V F N L+ + C P Sbjct: 337 LLCRWRGDTFILLIQSCRNLDEIEVFVRRLLAV--LKRPFFIANNPLYLQGYAGIACYPN 394 Query: 487 QGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLV 546 G+N ++ +A++ ++D ++ F +++ ++ E I + + A+E E L Sbjct: 395 HGDNVEILLNRVGIALNEVKDIGSRQYCFYEESMNSDHLERIQLEHALHQALERDEFLLY 454 Query: 547 YQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFR 606 YQPI+D+ + + G EAL RW G++SP FI + E G I +G I++TA F Sbjct: 455 YQPIIDVQSGRLCGVEALIRWQHPIHGLVSPGLFIGLLETTGLIIPVGEWIMRTAFQHFH 514 Query: 607 HFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINE 666 H++ ++ DDF + IN+SP Q P I+ E+ L + L VEITE ++ + Sbjct: 515 HWA--PAVDDDFRIAINLSPQQFQAPDLLPTILRILAESSLPPHRLEVEITENIVMQNVT 572 Query: 667 HFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVR 724 + L+ G+R+S+DDFGTG S+L +++K+D FT DI T I++ Sbjct: 573 ATQNLLNALQSHGIRLSMDDFGTGYSSLSYLKTFPFNTLKIDRSFTKDILHTPKDAAIIQ 632 Query: 725 IIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 + L + +IAEG+E E AR L LGC + QGY + P+ Sbjct: 633 AMLLLGNGFNLNIIAEGIEEEPQARCLYDLGCREMQGYWFSHPL 676 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 189/366 (51%), Gaps = 25/366 (6%) Query: 422 KLCQRIAEKYAQCC----DIVTFNADLYLLLCRE-NVQTFTRKIA--MVNDFDSSFGYRN 474 +L + IA+K +C + F D +++L + + T K+A + +F+SSF + Sbjct: 1038 QLLKTIADKLQRCVRPTDTVARFGGDEFVILLEDLTIWTDATKMAQRITEEFESSFTLQE 1097 Query: 475 LRIHKSA------ICEPLQGENAWSYAEKLKLAISS----IRDHMFSEFIFCDDAKLNEI 524 SA P Q + + + S R MF + +L E+ Sbjct: 1098 QEYFTSASIGITFCSSPEQTPSELVRNADIAMYRSKEAGRARYTMFDPIMHTQATQLLEL 1157 Query: 525 EENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIA 584 E N+ R A+E E + YQPIV + R +LG EAL RW+ E+G+ISP FI +A Sbjct: 1158 ETNL------RLALEREEFIVYYQPIVSLMNRNLLGFEALVRWIHPEKGVISPANFIPVA 1211 Query: 585 EDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKE 644 E+ G I LG +++ + + + + ++ ++ + +N+S QL +P+ R I+ E Sbjct: 1212 EETGLIIPLGEWVLRESCRQMKAWQEQFIGAENLRVSVNLSGKQLQQPNLINRIDNILTE 1271 Query: 645 NGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDS 704 GL+ +L +EITE+++ E + Q++ + +++SIDDFGTG S+L + + D+ Sbjct: 1272 TGLEGKNLKLEITESMLMNNKEQVSELLLQMKAKKIQVSIDDFGTGYSSLSYLHYLPVDT 1331 Query: 705 IKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGY 762 +K+D F + G +IV I LA + ++ V+AEGVE+E R+L +LGC QGY Sbjct: 1332 LKIDRSFVSRMSQVGENFEIVEAIITLAHHLQMDVVAEGVETEQHLRQLQQLGCEFGQGY 1391 Query: 763 LYQKPM 768 + KP+ Sbjct: 1392 FFSKPL 1397 >UniRef50_A0LUT2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LUT2_ACIC1 Length = 636 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 125/444 (28%), Positives = 207/444 (46%), Gaps = 22/444 (4%) Query: 344 KEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNM--------AIIESNNNQ-YL 394 + I S+ ++ + AE R + L S+D +G + A+ ++ + +L Sbjct: 184 RSISSVVCAVHARRRAETARYH----LASHDALTGLVNRTTFAARVADAVGQAERGRGHL 239 Query: 395 AVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLY-LLLCRENV 453 V ++ + G + V G ++++R + QR+ + D + +L+ Sbjct: 240 CVLMVDIDGFKRVNDSLGHLHGDRLLRDIAQRMTAIVRPTDTVARIGGDEFGVLVTGLAA 299 Query: 454 QTFTRKIAMV--NDFDSSFGYRNLRIHKSA-ICEPLQGENAWSYAEKLK---LAISSIRD 507 IA+ + F + F +H SA I AE L LA++ ++ Sbjct: 300 PNEAEAIALRLRDAFRTPFAVDGRSVHLSASIGVATSASRGIEPAELLADADLAMTEAKN 359 Query: 508 HMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRW 567 + A + I + ++R A+E G L +QPIV++ T +GAEAL RW Sbjct: 360 TGKGRCVVFRPALRRAAAQRIALEEDLRAAVEAGAFRLDFQPIVELATGMWVGAEALLRW 419 Query: 568 VSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPW 627 RG++ PL FI +AED G + LG +++TA+ ++ R + DF + +NVS Sbjct: 420 PHPTRGLVPPLDFIPLAEDSGLVVPLGEWVLRTALQHRVAWTPRLHCRQDFCVSVNVSVR 479 Query: 628 QLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDF 687 QL EP F + T + +G+ L +E+TE+V + LR GVRI++DDF Sbjct: 480 QLAEPGFVDVVTDALAASGVPPEVLVLEMTESVFIDEEAGTLAVLRALRDLGVRIALDDF 539 Query: 688 GTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESE 745 GTG S L D +K+D F + GTA + R + LA+ + ++AEG+E+ Sbjct: 540 GTGYSALSYLRRFPVDILKLDRSFIAGLLGTAQDQAVTRAVIGLAQQLDLDLVAEGIETY 599 Query: 746 DVARELIKLGCVQAQGYLYQKPMP 769 D L +LGC QG+L QKPMP Sbjct: 600 DQLEILRQLGCRLGQGFLLQKPMP 623 >UniRef50_C7Q6I3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q6I3_CATAD Length = 750 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 123/443 (27%), Positives = 211/443 (47%), Gaps = 26/443 (5%) Query: 349 IKNSIAE--MKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEA 406 I++++AE ++D +N+ L + DQ + M + LAV + L + Sbjct: 313 IEDALAEQAVRDPLTHLANRALLVDRIDQA---LAKMRV----QGGRLAVLFLDLDRFKV 365 Query: 407 VEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVT-FNADLYLLLC-----RENVQTFTRKI 460 V G + ++ R+ Q D+V F D +++LC R++ R++ Sbjct: 366 VNDSLGHAAGDALLVATAARLRSAVRQGSDLVARFGGDEFVILCEHVQGRKDAADVARRV 425 Query: 461 AMVNDFDSSFGYRNLRIHKSA-ICEPLQGENAWSYAEKLKLAISSI-----RDHMFSEFI 514 + F IH SA I + + + E L+ A +++ R+H +I Sbjct: 426 TRA--LSAPFERDGQPIHISASIGIAVTSDPMTTADELLRDADAAMFRVKARNHGSGSYI 483 Query: 515 FCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGI 574 F DD+ E +W+ +R A+E E LVY+P+ ++ R I+G EAL RW ERG+ Sbjct: 484 FFDDSVREEAVSRLWLEGELRRAIEEKEFRLVYEPVYNLRDRQIIGMEALIRWQHPERGL 543 Query: 575 ISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL-KDDFLLHINVSPWQLNEPH 633 + P FI IAED I +G ++ A G+ +++R K + +N+SP QLN+ Sbjct: 544 LPPSTFIEIAEDCDLIVPIGRWVLHEACGQLAVWNRRRDPGKPPLTMAVNLSPRQLNDEG 603 Query: 634 FHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSN 693 ++ +GL+ L +E+TET + + + Q+ GV+I++DDFGTG S+ Sbjct: 604 LVAEVANALRGSGLEPEQLTLEVTETAVHEAPQFAQAVLSQVSDLGVQIALDDFGTGYSS 663 Query: 694 LKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVAREL 751 L I +++K+D F + G IV + +A + + EG+ESE L Sbjct: 664 LGHLRRIPANALKIDRAFVNGLEHKGGDTAIVTAVVTMAHALGMITVGEGIESEAQYEYL 723 Query: 752 IKLGCVQAQGYLYQKPMPFSAWD 774 LGC Q QGYL+ +P+ +A++ Sbjct: 724 RALGCDQGQGYLFAEPVSAAAFE 746 >UniRef50_D2SGK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SGK4_9ACTO Length = 898 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 88/247 (35%), Positives = 141/247 (57%), Gaps = 5/247 (2%) Query: 530 IARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGF 589 I ++ A+E + L +QP +D+ T +++G EAL RWV ERG+I PL+FI +AE+ G Sbjct: 625 IVNDLHRALERNQFVLHFQPQIDLRTNSLIGVEALLRWVHPERGLIPPLEFIPVAEETGL 684 Query: 590 INELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKA 649 IN+LG +++ A + R + R ++ ++ +N+S QL++P E ++++G A Sbjct: 685 INDLGRWVLRAACQQGRTWLDRFPDREPLVMSVNLSGRQLHQPRLAEEVAAALEDSGFPA 744 Query: 650 NSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDS 709 + L +EITE+V+ +E L++ GVR++IDDFGTG S+L D +K+D Sbjct: 745 DQLVLEITESVLMNDTAATIHTLEALKELGVRLAIDDFGTGYSSLTYLQRFPIDILKIDK 804 Query: 710 QFTGDIFGTA----GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQ 765 F D G+A + R I LA+ R+ +AEGVE + REL L C QGY + Sbjct: 805 SFV-DGLGSANIEESAVTRTIVALAKTLRLETVAEGVERSEHVRELQSLHCDIGQGYFFA 863 Query: 766 KPMPFSA 772 +P+ A Sbjct: 864 RPLDAGA 870 >UniRef50_A1S8A3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S8A3_SHEAM Length = 751 Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 120/451 (26%), Positives = 223/451 (49%), Gaps = 18/451 (3%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERS-----NKLLSLISYDQESGFIKNMAIIE 387 I A+ +G + +++ + I+ +K E E + + L L + + + + + Sbjct: 292 ISAVYGEDGQVRCFVAVFSDISLLKQTEAEVAQLAWHDPLTRLPNRSKLTTISQQQIKLA 351 Query: 388 SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLL 447 +N LA+ +I + + + FG +K++ L +R+A + D ++L Sbjct: 352 ANRKTRLALLLIDVDLFKHINDSFGHLAGDKVLLSLSERLAALLGAEDTLARIGGDEFVL 411 Query: 448 LC----RENVQTFTRKI--AMVNDFDSSFGYRNLRIHKSA--ICEPLQGENAWSYAEKLK 499 L R+++ I A FD+S G ++R+ S P G+N + + Sbjct: 412 LTQVRRRDDIPVILSAIQRAFDTSFDTSEG-ESVRLSASIGIAVYPDDGDNPDTLLKNAD 470 Query: 500 LAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAIL 559 A+ + + F + + + + +R A++ L LVYQP +++ TR ++ Sbjct: 471 AAMYRAKQQGRNRHAFYTEQMTQSSMQQLRLQTALRGAVKNSALSLVYQPKINLRTRKLI 530 Query: 560 GAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFL 619 G EALCRW E G++SP +FI +AE IG + E+G ++K A + R + R + Sbjct: 531 GVEALCRWTDHELGVVSPAEFIPVAESIGLMPEIGLWVLKEACRQARIW--RDQGLNPGR 588 Query: 620 LHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQG 679 + +NVS QL +F + ++ + GL ++L +EITE+V+ +++LR G Sbjct: 589 MAVNVSGSQLTGDNFADSVARVLTQTGLSPDALELEITESVVLDNPASAIDTMDKLRGMG 648 Query: 680 VRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNRIPV 737 V +++DDFGTG S+L ++ + +K+D F ++ +G I I + ++ V Sbjct: 649 VSLALDDFGTGYSSLSYLRKLPLNKLKIDQSFVRELPTDQDSGAIAMAIIAMGEALKLGV 708 Query: 738 IAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 IAEGVE+E A L++LGC +AQGYL+ +P+ Sbjct: 709 IAEGVENETQAEFLLRLGCTEAQGYLFARPL 739 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 114/403 (28%), Positives = 198/403 (49%), Gaps = 23/403 (5%) Query: 395 AVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE--- 451 A+ I L +A+ G D ++++ ++ QR+ QC + D ++++ ++ Sbjct: 510 AIMFIDLDNFKALNDTQGHDVGDRLLAEVAQRLKSSVRQCDTVARLGGDEFVVMVQDLAA 569 Query: 452 ------NVQTFTRKIAMVND------FDSSFGYRN-LRIHKSA-ICEPLQGENAWSYAEK 497 V+ KI D FD+ G RN L H +A I L G ++ + E Sbjct: 570 DSMVVAQVEAVAGKILAALDCPYRLVFDAELGRRNALNYHCTASIGITLFGAHSTNVDEL 629 Query: 498 LK---LAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 LK LA+ +D + F D I + + ++R A+E G+ L YQP V Sbjct: 630 LKQADLAMYQAKDSGRNAIRFFDPEMQAAITSRVALEADLREAVEAGQFQLYYQPQVVGE 689 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 + + GAEAL RW + RG++ P +FI +AE+ G I LG +++TA + ++ + + Sbjct: 690 SHRLTGAEALLRWHHSRRGMVPPSEFIPLAEETGLILPLGQWVLETACAQLATWASQPEM 749 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 + +NVS Q+ + F ++ ++ + G L +E+TE+++ E + Sbjct: 750 A-QLTVAVNVSAHQIRQTDFVDQVLAVLADAGANPQRLKLELTESLLVSNVEDIIAKMTL 808 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARY 732 L+ +GV S+DDFGTG S+L + D +K+D F ++ A I ++I LA Sbjct: 809 LKSRGVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQSFVNEVLTDANDAAIAKMIVALAES 868 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 + VIAEGVE+E+ L + GC QGYL+ KP+P + +++ Sbjct: 869 LGLAVIAEGVETEEQRNFLAESGCHAYQGYLFSKPLPLAGFEQ 911 >UniRef50_A4BJS0 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Reinekea blandensis MED297 RepID=A4BJS0_9GAMM Length = 857 Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 98/262 (37%), Positives = 145/262 (55%), Gaps = 8/262 (3%) Query: 509 MFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWV 568 +F E + +L E++E+ R+A+ E LV+QP VD R ILGAEAL RW Sbjct: 585 LFQEEMAEASERLLELKEDS------RNALRRDEFHLVFQPQVDARDRKILGAEALLRWT 638 Query: 569 SAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQ 628 RG++SP +FI + ED + +G ++I+ A + + + +++DF L +NVSP Q Sbjct: 639 HPSRGMVSPGEFIPLLEDGEMMPLVGQKVIELAAAQLADWRKEGLIREDFRLSLNVSPQQ 698 Query: 629 LNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFG 688 + F T++ E+ L A + +EITE +I +H +++LR+ G+ SIDDFG Sbjct: 699 FRQADFVSTVRTVLDEHDLPAYLIDLEITEGMIIDNIDHTVAAMKELREMGIHFSIDDFG 758 Query: 689 TGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESED 746 TG SNL + D +KVD F DI A IVR I +A ++ +AEGVE+ED Sbjct: 759 TGYSNLNYLKRLPLDVLKVDQSFVRDIEHDANDTAIVRTIIAMADQLKLNTVAEGVETED 818 Query: 747 VARELIKLGCVQAQGYLYQKPM 768 L +LGC QGYLY P+ Sbjct: 819 QLTLLRELGCQVFQGYLYSPPL 840 >UniRef50_A8VRD8 Putative diguanylate phosphodiesterase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRD8_9BACI Length = 778 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 134/444 (30%), Positives = 211/444 (47%), Gaps = 25/444 (5%) Query: 348 SIKNSIAEMKDAEIERSNKLLSLISYDQESGFIK-NMAIIE--------SNNNQYLAVGI 398 S+KN I E + K+ +L YD + N +IE + Y A+ + Sbjct: 331 SVKNEIGEAARSFNAMHEKIRNLTYYDPLTKLYNFNGFLIELPFRVKKLTQKEGYTAIAL 390 Query: 399 IKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVT--FNADLYLLLCRENVQTF 456 I + + ++ G N+I+RK R+ Y Q ++V F + L++ Sbjct: 391 ISIDDFKRFNSLRGYQAGNEILRKFADRLT-MYMQEGEMVGRYFGDEFILVMHANTTDNI 449 Query: 457 TRKI------AMVNDFDSSFGYRNLRIHKSA-ICEPLQGENAWSYAEKLKLAISSIRDHM 509 R+I AM N DS G+ NL++ A I + + G A+ + + R+ Sbjct: 450 ERRIRTIWQNAMTNLADSEHGW-NLKMSIGAVITKEIYGTADECLAQANMAKLQAKREGG 508 Query: 510 FSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVS 569 + + F A IEE+ + + +A+E GEL L YQPIVD+ + G EAL RW Sbjct: 509 -NRYRFYAKAMTRVIEEDQRLENELNYALERGELELYYQPIVDVGNGEVYGNEALIRWTH 567 Query: 570 AERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQL 629 E G +SP+K I IAE G I E+G ++K + + R + Q K F + IN+S Q Sbjct: 568 PEYGSVSPVKMIEIAERSGQIVEIGEWVLKEGLRQNRLW-QDQGFKPMF-ISINISVIQF 625 Query: 630 NEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGT 689 +P+F ++++GL + +EITET + + + L+ GV I+IDDFGT Sbjct: 626 EQPNFIRSVKKAIEDSGLDPKWIQLEITETTAMSLGDDKIEKMAALKGLGVSIAIDDFGT 685 Query: 690 GLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDV 747 G S+L F + ++K+D F + A I + +A RI +AEGVE+ + Sbjct: 686 GYSSLAYFTQFPITTLKIDRTFISRLGKDPKAEMITEAVISMAETLRIQTVAEGVETAEQ 745 Query: 748 ARELIKLGCVQAQGYLYQKPMPFS 771 A L +LGC QG+ + KPMP S Sbjct: 746 AAFLKELGCTYIQGFYFAKPMPPS 769 >UniRef50_A6X3N7 Diguanylate cyclase/phosphodiesterase n=9 Tax=Proteobacteria RepID=A6X3N7_OCHA4 Length = 658 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 99/255 (38%), Positives = 148/255 (58%), Gaps = 12/255 (4%) Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 +++ A+E GE+ + YQP TR I G EAL RW RG +SP++FI +AE IGFI+ Sbjct: 402 DLQKALENGEMEVYYQPQACTITREICGYEALLRWTHPIRGAVSPVEFIPVAEKIGFIHA 461 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 LG ++KTA E H+++ LK + +N+SP Q + + ++++GL+AN L Sbjct: 462 LGDWVLKTACLEAAHWNK--PLK----IAVNLSPVQFRSLNLIQSVIDALEQSGLEANRL 515 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +EITE+V+ NE + QL+ G++I++DDFGTG S+L D IK+D F Sbjct: 516 ELEITESVLLDKNEQTLSTLRQLKALGIQIAMDDFGTGYSSLGSLSGFPFDKIKIDRSFV 575 Query: 713 GDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPF 770 D+ A IV ++ + R R+ IAEG+E+E+ L +LGC Q QGYL +PMP Sbjct: 576 RDVTTRPDALAIVELVTGVGRSLRMVTIAEGIETEEQFECLKRLGCDQVQGYLIGRPMPA 635 Query: 771 SAW----DKSGKLVK 781 S +SG+ VK Sbjct: 636 SKLKHLHGRSGQDVK 650 >UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KCA9_AZOSB Length = 689 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 93/253 (36%), Positives = 148/253 (58%), Gaps = 4/253 (1%) Query: 524 IEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITI 583 I E++ + +R A++ G+L LVYQP+VDI + I+GAEAL RW + G ISP++FI + Sbjct: 425 ILESLLLETQLRRALDHGQLSLVYQPMVDIASGRIVGAEALLRWQHPQHGEISPVRFIPV 484 Query: 584 AEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMK 643 AE+ G I +G +++ A+G+ + + RA+ D ++ +N+S Q + ++ Sbjct: 485 AEESGLILPIGEWVLEQALGQVQRW--RAAGHPDLVMAVNLSALQFERLNISNTVLRLLD 542 Query: 644 ENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPD 703 GL ++L +E+TE+V+ E + L +GVR+S+DDFGTG S+L + Sbjct: 543 HYGLPGSALELELTESVLMEDAERAVAAMLNLADRGVRLSVDDFGTGYSSLAYLTRLPLA 602 Query: 704 SIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQG 761 +K+D F +I +A + R I DLAR + VIAEGVE+E L + C QAQG Sbjct: 603 KLKIDRSFVRNIPSDASARSVARTILDLARSLALEVIAEGVENEAQLLLLREWCCDQAQG 662 Query: 762 YLYQKPMPFSAWD 774 YLY +P+P A++ Sbjct: 663 YLYSRPVPARAFE 675 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 132/484 (27%), Positives = 221/484 (45%), Gaps = 39/484 (8%) Query: 310 RRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLS 369 RR+ E+ + T+ + DS +G + + I+++K +E +L Sbjct: 591 RRKSGELYPQILTINTVADS----------QGRPSHYVGVMTDISQLKQSEA----RLEH 636 Query: 370 LISYDQESGFIKNMAIIESNNNQYL----------AVGIIKLCGLEAVEAVFGVDERNKI 419 L+ YD + + N +++S L AV + L + V G + + Sbjct: 637 LVHYDPLTN-LPNRRLVQSRLEHALERADRQGGRVAVLFVDLDRFKTVNDSLGHPSGDVL 695 Query: 420 VRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDS----SFGYRN- 474 + L +R++E+ + + D +L+L EN+Q A+ S F N Sbjct: 696 LELLARRLSERVREDDTLARLGGDEFLVLL-ENLQRPEDAAAVAESLLSLLQQPFHLPNG 754 Query: 475 --LRIHKSAICE--PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWI 530 L + S P G + +A+ ++ + + F + E + + Sbjct: 755 QELYVGASIGISLYPDDGHTVTDLIQHADVAMYQAKEEGRNTYRFYTPSLTQTARERLGL 814 Query: 531 ARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFI 590 + A+ E L YQ +D+ ++G EAL RW SA G+++P +FI +AE+ G I Sbjct: 815 EARLHRALASEEFVLHYQAQIDMRDGRLIGCEALVRWHSATEGLVAPDRFIPLAEETGLI 874 Query: 591 NELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKAN 650 LG +++ A + + S RA D + +N+S QL P ER T +++E GL A Sbjct: 875 VPLGEWVLRQACADCQ--SWRARGLTDLTVAVNLSGRQLRSPDLVERVTRVLRETGLPAE 932 Query: 651 SLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQ 710 L +E+TE++I E + L+ GVR+SIDDFGTG S+L + D +K+D Sbjct: 933 RLKLELTESMIMDQREQALERLRALKALGVRLSIDDFGTGYSSLAYLKRLPIDELKIDRD 992 Query: 711 FTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 F DI + +I I +AR R+ VIAEGVE+ + LI+ GC QGYL+ +P+ Sbjct: 993 FVRDIPEDSSDMEIAATIIAMARNLRLNVIAEGVETPEQCDFLIRQGCTAGQGYLFGRPL 1052 Query: 769 PFSA 772 P A Sbjct: 1053 PAEA 1056 >UniRef50_A8UR98 Sensory box/GGDEF family protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UR98_9AQUI Length = 959 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 120/472 (25%), Positives = 223/472 (47%), Gaps = 28/472 (5%) Query: 318 ELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQES 377 +L + + + + ++ L + + EI + S +M + + +L + +D + Sbjct: 480 KLADAIGVITRNLEKNPPLNLPGTNIAEIKELTESFRDMANKAMSYLEELKKMAYFDPLT 539 Query: 378 GF---------IKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIA 428 G I++ + N +A+ I L + V G D ++I+ ++ +R++ Sbjct: 540 GLPNRTLLRDRIESAIHFANRNGSKVAILFIDLDYFKTVNDTLGHDVGDRILVQVAKRLS 599 Query: 429 EKYAQCCDIVTFNADLYLLL------CRENVQTFTRKIAMVNDFDSSFGYRNLRIHKSA- 481 + + + F D ++ + ++ VQ R +++ F + F I+ SA Sbjct: 600 SVFRETDTVARFGGDEFVAVIPDVRDLKDVVQVAERILSL---FSTPFEANGEDIYLSAS 656 Query: 482 ---ICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAM 538 P GEN + +A+ ++ S F F + ++ E + + + A+ Sbjct: 657 VGIAVYPDNGENPTELIKNADMAMYRAKEEGKSNFSFFTEEMNSKAVEILSVKNKLHKAL 716 Query: 539 EIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQII 598 E GE L YQPI + +I+G EAL RW +RG++SP KF+ I E++G + E+G ++ Sbjct: 717 ERGEFLLYYQPIYSLGDNSIVGLEALLRWRDPDRGLVSPAKFMPILEELGLVKEVGRWVM 776 Query: 599 KTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITE 658 A + R + R + + +N+SP Q + +F +R I + + +EITE Sbjct: 777 GEAFKKSREWGDRYGI----YVSVNISPRQFMDRNFVKRVLQIASDTNANNEHVVLEITE 832 Query: 659 TVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT 718 T + R E +++LR +G ++++DDFGTG S+L + D IKVD FT + + Sbjct: 833 TSLMRNPEESVSILKRLRAKGFKVAVDDFGTGYSSLAYLKRLPIDIIKVDMTFTQGMVKS 892 Query: 719 A--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 IV + L++ + +AEGVE+ + L +LGC AQGYL+ KPM Sbjct: 893 NVDRSIVMAVIGLSKSLGLKSLAEGVETREQVNILRELGCDLAQGYLFGKPM 944 >UniRef50_A9BLH0 Diguanylate cyclase/phosphodiesterase n=2 Tax=Comamonadaceae RepID=A9BLH0_DELAS Length = 877 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 123/448 (27%), Positives = 210/448 (46%), Gaps = 28/448 (6%) Query: 345 EIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES-------NNNQYLAVG 397 E S+ ++ M E + +L+ YD + + +IE N A+ Sbjct: 426 ETSSLVSAFHNMAQRLQESFEHMRTLLQYDSLTQLLTRAGLIEQADAAAAANTPCPAALC 485 Query: 398 IIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD-----LYLLLCR-E 451 +++L +V G +++R + +R+ + Q ++ A L+L C + Sbjct: 486 LLELQNFRSVRDDVGHGTGEQLLRAVAERLRNHHLQFPALLARTASNEFAMLWLHDCTPQ 545 Query: 452 NVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICEPLQGE------NAWSYAEKLKLAISSI 505 +Q R + + FD F I A + GE W + L + Sbjct: 546 QMQDKCRHLLEI--FDQPFSVGKDDIVLRACAGAVSGELLPGVLPEWLRNASIALGEAQR 603 Query: 506 RDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALC 565 H F+ + + ++ +A +R A+E EL + YQP+VD+ T +++GAEAL Sbjct: 604 GSH---PFLLFEPSLAQKMLGRTQLAMELRQAVERNELRVFYQPVVDLATGSMVGAEALV 660 Query: 566 RWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVS 625 RW S RG++ P FI +AE+ I +G +++TA + S L DF LH+N+S Sbjct: 661 RWNSPTRGMVPPGVFIPVAEESDLILSVGEWVLRTAAHDI--ASHLPRLPADFELHVNMS 718 Query: 626 PWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISID 685 +L + F + +GL A L +E+TE+++ ++ I +R GV+I+ID Sbjct: 719 ARELIQSDFASTLEQALATSGLPARLLTLELTESMLLDDSDATLQRIAAIRALGVKIAID 778 Query: 686 DFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVE 743 DFGTG S+L + D IK+D F G + + IV + +A+ + V+AEGVE Sbjct: 779 DFGTGYSSLAYLSRLRFDCIKIDQSFVGQLPESESDKSIVTAVLRIAQGFGVKVVAEGVE 838 Query: 744 SEDVARELIKLGCVQAQGYLYQKPMPFS 771 + A+ L LGC AQGYL+++P+P + Sbjct: 839 EQAQAKLLHALGCKHAQGYLFERPVPLA 866 >UniRef50_Q5E8Q7 GGDEF domain protein n=2 Tax=Vibrio fischeri RepID=Q5E8Q7_VIBF1 Length = 852 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 170/748 (22%), Positives = 328/748 (43%), Gaps = 103/748 (13%) Query: 97 SVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLVDESGRVIFADFNPSKRPW-SVASDD 155 S+ L+L D +R ND +++Y G + ++ R + A+++P RPW A+ Sbjct: 134 SLSLMLQD-------KRTNDDLIIYR-----GSEMSDNIRTVIANYDPRSRPWYKPAATT 181 Query: 156 SNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDE 215 SW+ Y D + IS T+H D D + V D+ N++L Q + + + Sbjct: 182 FKPSWSKIYTNADEKKEITIS-TMHPVFYDEDFIGV--FAADVKLDSFNKFLSQETKHTK 238 Query: 216 -VLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPN-------NAL 267 V++L +++LI ++S G+ I + ++ + AV + +A Sbjct: 239 GVIYLIDD----------QQRLIAHSSVGSVLSIGTQNSPVGSRLFAVESCDETIQQSAT 288 Query: 268 F--------------EIY-FYYPG------------GNLLN--------ASDKLFYLP-- 290 + E++ FYY G GN LN SD L +L Sbjct: 289 YIKNNQLINNKNNDAEVFSFYYKGERYFSQITPYIDGNNLNWYIVISISESDLLGHLQEE 348 Query: 291 ------FAFII--IVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGD 342 F ++ I L+V + T+V + F+ N + + + +EA +G Sbjct: 349 QRRGLFFGIVLAAIGLIVGVYLVTQVTKPIFTTANAARNIAS--GNWNNNVEA----QGS 402 Query: 343 AKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES-----NNNQYLAVG 397 E + N+ +M + + + I++D + + +IE + ++ G Sbjct: 403 IYETTLLMNAFNDMTNKLQSSFDAMRQQITFDSLTQVLSRQGLIEQCRIMLDKKEHYEQG 462 Query: 398 --IIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQ-CCDIVTFNADLYLLLCR---- 450 +I + + FG+ E +++++ + R+ +A I D + L Sbjct: 463 LLVIGINNFRDINDSFGILEGDQLLKNISDRLQCSFAHDNIAIARVGGDEFALFFSKLDD 522 Query: 451 -ENVQTFTRKI--AMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKLAISSIRD 507 E ++ + R + + F + L I + L ++ + +A+ + Sbjct: 523 VEQLKQYARDMEGCFMTPFRVASNNSLLSISTGLVYGDLSCDSMTLWLRNASIALGQAKK 582 Query: 508 HMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRW 567 + + ++ + + + A + A++ EL YQPI+DI + +GAEAL RW Sbjct: 583 NNLNMSLYTPEMAEASLHKANMTAE-LSLAIKNKELVPFYQPIIDIKSGKTIGAEALIRW 641 Query: 568 VSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPW 627 +S +RG++SPL FI +AE+ G I +G Q++ A + + DF +H+N+S Sbjct: 642 LSPQRGMVSPLDFIPLAEENGMIIPMGSQVLTQACLDTVERIDQGLWPADFHMHVNLSVC 701 Query: 628 QLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDF 687 QL + +F + ++ + +L +EITE+ + + ++++R GV+I+IDDF Sbjct: 702 QLTQNNFLDELKAVLHNTSMAPENLTLEITESRLVNHDNSTINTMQKIRDLGVQIAIDDF 761 Query: 688 GTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESE 745 GTG S+L +++ D +KVD F D+ I + ++ + I ++AEG+E++ Sbjct: 762 GTGYSSLAYIHKLPFDVLKVDRSFIKDLTAENIDSSIAAAVCNMTQGFDITLVAEGIETQ 821 Query: 746 DVARELIKLGCVQAQGYLYQKPMPFSAW 773 + A+ L L AQG+LY +P+P W Sbjct: 822 EQAKLLASLNYHHAQGFLYSRPIPLEDW 849 >UniRef50_A3YB63 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A3YB63_9GAMM Length = 949 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 109/384 (28%), Positives = 189/384 (49%), Gaps = 13/384 (3%) Query: 398 IIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFT 457 + L G + + FG D + ++ L +R+ + F D +LL N Q + Sbjct: 536 LFDLNGFKLINDTFGHDVGDALLIGLSERMGSLLEPNERLARFGGDEFLLFIPGN-QLLS 594 Query: 458 RKIAMVNDFDSSFGYRNLRIHKSAICE----PLQGENAWSYAEKLKLAISSIRDHMFSEF 513 R + + +S +N H +A P G + + ++ LA+ + ++ Sbjct: 595 RINFLHKEIFASIRIQNRDFHCAASAGIAVYPKDGTDTLTLIKRADLAMYEAKRKQATDC 654 Query: 514 IFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERG 573 + N+ E + +R+A E E L YQP+V+ + I+ EAL RW SA +G Sbjct: 655 VCYRPEMENQGVERYEMESALRYAYEHNEFSLNYQPVVNPEQKRIMSVEALIRWQSASKG 714 Query: 574 IISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPH 633 + P KFI +AE++G IN++G +IK A+ + H ++ DD +++N+SP QL+ Sbjct: 715 WVGPDKFIKVAEEMGLINQIGLWVIKQALTDLEHV--KSIFGDDVCINVNLSPHQLDNSA 772 Query: 634 FHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSN 693 + ++ N+L +E+TE V+ IN+ I +LRK G RI++DDFGTG S+ Sbjct: 773 LTNELVALAQQKPSLMNNLILEVTENVL--INDASVDRIYRLRKAGYRIALDDFGTGFSS 830 Query: 694 LKRFYEINPDSIKVDSQFTGDIFGTAGK---IVRIIFDLARYNRIPVIAEGVESEDVARE 750 L + D +K+D F F + + +++ I +A+ + ++AEG+ESE + Sbjct: 831 LSHIARMPIDILKIDQSFIAR-FDDSERDRLLLKNIVAMAKDLDLHIVAEGIESEHQVNQ 889 Query: 751 LIKLGCVQAQGYLYQKPMPFSAWD 774 L +GC QGY + KP S +D Sbjct: 890 LADMGCPNMQGYFFSKPKALSEFD 913 >UniRef50_Q8DKE8 Tlr0911 protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DKE8_THEEB Length = 1240 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 92/272 (33%), Positives = 150/272 (55%), Gaps = 2/272 (0%) Query: 500 LAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAIL 559 +A+ + ++ D + + + + A+ EL + +QPIV++ T AI+ Sbjct: 964 IAMYQAKKQGLGQWCIFDPQMHTQAQSCFTLESQLHQAIANSELQVYFQPIVEMKTGAIV 1023 Query: 560 GAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFL 619 G EAL RW E+G ISP +FIT+AE G I LG Q+++ A+ EF + Q+ S + Sbjct: 1024 GLEALSRWFDPEKGEISPSEFITLAEQAGLIVSLGRQVLERAIQEFSQWRQQDSRRQTMT 1083 Query: 620 LHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQG 679 L IN+SP QL + +F ++ L + L +EITET + R E E+L++ G Sbjct: 1084 LGINISPQQLVDANFVSDILAALRRAQLPPHLLHLEITETTMIRNLEATLQVAEELQQLG 1143 Query: 680 VRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPV 737 V ++IDDFGTG S+L R +++ ++K+D F + A +I+ + L + R+ V Sbjct: 1144 VALNIDDFGTGYSSLSRLHQLPIHALKIDRSFVQSLEESQAAQEIIGAVIALGKSLRLDV 1203 Query: 738 IAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 +AEGVE+ A +L+ LGC+ QGY + P+P Sbjct: 1204 VAEGVETAVQAAQLMDLGCLYGQGYFFYPPLP 1235 >UniRef50_A8MJT4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MJT4_ALKOO Length = 504 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 117/390 (30%), Positives = 196/390 (50%), Gaps = 13/390 (3%) Query: 399 IKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR-----ENV 453 I + G + V G + ++I+ ++ +R+ + + ++ D ++LL + E + Sbjct: 117 IDVDGFKMVNDTLGYEIGDQILVRIAERLKKTINKEGELFHIRGDEFVLLIQKEDSMEKI 176 Query: 454 QTFTRKI--AMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFS 511 Q + I AM F S +L + P G N + +A+ + ++ S Sbjct: 177 QKLSETIIKAMAMSFVFSEKEIHLTVSVGIAGYPWGGSNLNLLLQNAHIAVQAAKESSKS 236 Query: 512 EFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAE 571 + + DD+ ++ + + N+ A+E E L YQP +D T I+G EAL RW + Sbjct: 237 KHLVYDDSMNIKMNRKLELINNLHKALEKKEFELYYQPQIDSETNEIVGLEALLRWQNPT 296 Query: 572 RGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNE 631 G +SP +FI +AE+ G I +G ++KTA + + Q+ K + +N+S Q NE Sbjct: 297 LGRVSPAEFIPVAEETGLIIPIGDWVLKTACAQNATW-QKEGYKP-IPVSVNISTIQFNE 354 Query: 632 PHFHERFTTIMKENGLKANSLCVEITETVIERINE-HFYLNI-EQLRKQGVRISIDDFGT 689 P F ++ TI+KE L L +EITE+V IN+ +N+ +L+K GV+I++DDFGT Sbjct: 355 PLFVDKVVTILKETTLNPKWLHLEITESV--AINDATLTINVLNRLQKIGVKIALDDFGT 412 Query: 690 GLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVAR 749 G S+L + + +K+DS F DI I + I L + + V+AEGVE+ + Sbjct: 413 GFSSLGYLSKFKINVLKIDSSFVQDIGEDESTITKTIIVLGKNLNMEVVAEGVETNEQLD 472 Query: 750 ELIKLGCVQAQGYLYQKPMPFSAWDKSGKL 779 L GC QGYL+ P+P +K KL Sbjct: 473 YLKNAGCDIIQGYLFSSPLPAGQIEKMFKL 502 >UniRef50_B0C4Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=2 Tax=Cyanobacteria RepID=B0C4Z3_ACAM1 Length = 754 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 82/241 (34%), Positives = 136/241 (56%), Gaps = 2/241 (0%) Query: 530 IARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGF 589 + R++R A++ E L YQPI+D+ + + E L RW +RG++ P +FI +AE+ G Sbjct: 473 LERDLRSAVDRQEFVLYYQPIIDLQSGDLTDVEVLVRWQHPDRGLVMPSEFIPLAEETGL 532 Query: 590 INELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKA 649 I E+G +++ A R + Q+ + + +N+S QL +P+F + ++ ++GL Sbjct: 533 IVEIGQWVLQEACQTLRDYQQQFASATELKFSVNLSSEQLQDPNFIQTVDRVLSQSGLDG 592 Query: 650 NSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDS 709 L +E+TE+++ E ++QLR + + IS+DDFGTG S+L Y D++K+D Sbjct: 593 RYLKLELTESMLMSHEEKHIKTLQQLRDRSITISLDDFGTGYSSLSYLYRFPLDTLKIDQ 652 Query: 710 QFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKP 767 F + +IV I LAR + VIAEG+E+E+ L KLGC + QGY + P Sbjct: 653 SFVSRMISEPKDAEIVNTIISLARTLNMDVIAEGIETEEEVLHLKKLGCERGQGYWFSPP 712 Query: 768 M 768 M Sbjct: 713 M 713 >UniRef50_C6XLS7 Diguanylate cyclase/phosphodiesterase with MHYT sensor n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XLS7_HIRBI Length = 700 Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 137/500 (27%), Positives = 229/500 (45%), Gaps = 34/500 (6%) Query: 298 LLVVYLMTTRVFRRQFSEMTELVNTLAF----LPDSTDQIEALKIREGDAKEIISIKNSI 353 L+ + T V F+ MT +N + F +P STD + + ++ + + Sbjct: 175 LISIGAFTVAVVGLHFTAMTA-INIIPFNLSDMPMSTDAFYGMAMATAAGGFLVLVTGLV 233 Query: 354 AEMKDAEIERSN--KLLSLISYDQESGF---------IKN-MAIIESNNNQYLAVGIIKL 401 + + D+ +N ++ L++ D +G I+N +A E+N AV I + Sbjct: 234 SFVIDSSTREANSQEIERLVATDALTGLPNRRSFREHIENTLAGFETNPLSNFAVLYIDI 293 Query: 402 CGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCREN----VQTFT 457 G + V G + +++ R++E + I D + + N ++ F Sbjct: 294 NGFKVVNDTLGYSVGDVVLKTFADRMSETLSSGEYIARLGKDEFAAVKVYNSANELEAFV 353 Query: 458 RKI--AMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIF 515 +K+ ++ + L + C P G A +LA+ + + + Sbjct: 354 QKVEDSIEIPIEVEEESIELDLAIGIACCPTDGHYADELTSNAELALRRAKSNASDSICY 413 Query: 516 CDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGII 575 D + + + + RN+R A+ EL L YQ ++ T + G EAL RW E+G I Sbjct: 414 YDANMDDVVRHHREMVRNLRQAILKNELQLYYQMQANVQTGELKGFEALLRWTHPEKGPI 473 Query: 576 SPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFH 635 SP FI IAE+ G I +LG ++K A E A + + + +N+SP QL +P+ Sbjct: 474 SPALFIPIAEENGLIIQLGDWVLKQACKE------AALWEKPYKVAVNLSPMQLMQPNLP 527 Query: 636 ERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLK 695 +R I+ + GL AN L +E+TET I E + Q++ GV +++DDFGTG S+L+ Sbjct: 528 KRIHEILLDTGLSANRLEIELTETAIFEDRERSVHVLRQIKALGVNVALDDFGTGYSSLE 587 Query: 696 RFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIK 753 D IK+D F +I A +R + L R IPV+AEGVE+E+ R L + Sbjct: 588 VLRSFPFDKIKLDRFFMDEIETSSVAKAFLRSVLALGRNLSIPVLAEGVETENQLRILQE 647 Query: 754 LGCVQAQGYLYQKP---MPF 770 GC QG+L KP +PF Sbjct: 648 EGCDAIQGFLLHKPSREVPF 667 >UniRef50_A3IK67 Putative uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IK67_9CHRO Length = 831 Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 109/385 (28%), Positives = 196/385 (50%), Gaps = 8/385 (2%) Query: 391 NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR 450 N L + II + L+ + + + N ++ ++ +R+ K + D ++LL R Sbjct: 429 NNSLGIVIIHVDSLQLLHESLNITQDNNLLIQITKRLQSKLRPKDILARLEEDEFVLLVR 488 Query: 451 ENVQTFTRKIA--MVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKL----KLAISS 504 IA ++N D SF N ++ + + E + +LA+ Sbjct: 489 NQSIQEIILIAKQILNIKDHSFDINNNKVFININIGINFNNVDYKKPESMIKDARLAMYQ 548 Query: 505 IRDHMFSEF-IFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEA 563 + + IF K + + I + ++R A++ +L L YQPIV++NT + G EA Sbjct: 549 AKAEKKENYAIFNPKIKADALAR-IQLETDLRQAIKHKKLSLYYQPIVELNTGYLSGFEA 607 Query: 564 LCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHIN 623 L RW +G ISP++FI IAE+IG I+ LG+ +++ A + + + + ++++N Sbjct: 608 LVRWQHPLKGNISPVEFIPIAEEIGLISYLGWWVLEQACYQLQIWQNLNTKAGQLVINVN 667 Query: 624 VSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRIS 683 VS QL E ++HER +++ G++ L +EITE+ + +H + QL+ G+ + Sbjct: 668 VSAEQLKEENWHERLNYLLQNTGIEGTQLKLEITESCLLETVQHETQRVGQLKNLGLGLC 727 Query: 684 IDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIAEGVE 743 IDDFGTG S+L R +E D++K+D F + + IV +I +LA + V+AEG+E Sbjct: 728 IDDFGTGYSSLSRLHEFPIDTLKIDRSFISKLGISDKAIVLMIINLAHTLGMNVVAEGIE 787 Query: 744 SEDVARELIKLGCVQAQGYLYQKPM 768 + + +L L C QG+ + +PM Sbjct: 788 TREQFNQLQGLNCELGQGFFFAQPM 812 >UniRef50_B7VHD8 GGDEF family protein n=52 Tax=Vibrionales RepID=B7VHD8_VIBSL Length = 857 Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 88/242 (36%), Positives = 143/242 (59%), Gaps = 3/242 (1%) Query: 534 IRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINEL 593 + A+++ + YQPI+D+ + A +GAEAL RWV+ E GIISPL+FI +AE+ G I ++ Sbjct: 598 LNKAIDLQQFEPFYQPIIDLESGATIGAEALARWVTDE-GIISPLEFIPLAEETGLIYDI 656 Query: 594 GYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLC 653 G QI+ + + + DF +H+N+S QL+E F E T +++ L A +L Sbjct: 657 GKQILHKSCRDTAIAIESGKWNKDFSIHVNLSVDQLSESGFIELVKTTLRDTKLPAQNLT 716 Query: 654 VEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTG 713 +EITE+ I ++ N+ L+ G+ I+IDDFGTG S+L +++ D +K+D F Sbjct: 717 LEITESRIVDNDQTIIDNMLTLKALGISIAIDDFGTGYSSLAYLHKLPFDCLKIDRSFVS 776 Query: 714 DI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFS 771 + IV I ++ + ++ ++AEGVE++ A L +L C AQG+LY +P+PF Sbjct: 777 KLEKENLDSSIVAAIVNITKGFKVSLVAEGVETQQQAELLKQLQCPLAQGFLYSRPVPFD 836 Query: 772 AW 773 W Sbjct: 837 QW 838 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 127/470 (27%), Positives = 218/470 (46%), Gaps = 27/470 (5%) Query: 328 DSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKN----- 382 D + I A+K R G+ I I + K+++ ++ L YD +G Sbjct: 240 DVSVTISAMKDRAGNIIGASKIVRDITQRKESQ----ERIEYLAHYDSLTGLPNRTLLSD 295 Query: 383 -MAIIESNNNQY---LAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIV 438 + I N +Y LA+ + + + V G + +K+++ + QR+ Q + Sbjct: 296 RLRIAIENARRYSIRLALLFVDIDRFKLVNDSLGHEIGDKLLKAVAQRMQSTVRQADTVS 355 Query: 439 TFNADLYL-LLCRENVQTFTRKIA--MVNDFDSSFGYRNLRIHKSAICE----PLQGENA 491 D ++ LL R T + A ++ + + +A P G++A Sbjct: 356 RVGGDEFVVLLSRIETATDAARSAEKLITSISQPYQIEEHELLLTASIGISIYPDNGKDA 415 Query: 492 WSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIV 551 S A+ S + + + F + E + + ++R A+ E+F +YQP + Sbjct: 416 SSLTRNADAAMYSAKGQGRNRYQFYSEDLTYAAAERLRLEHDLRGALSRDEIFPLYQPQI 475 Query: 552 DINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQR 611 ++ T ++G EAL RW A +G+ISP FI +AED G I LG I++ A + R + + Sbjct: 476 ELATGRVIGVEALMRWNRAGQGLISPASFIPVAEDSGLILALGEYILRKACLQARQWHEH 535 Query: 612 ASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLN 671 + + +NVS Q + F + ++ E G L +E+TE+V+ + E Sbjct: 536 QGFQG--TIAVNVSAVQFRQNDFTDVVLRVLSETGFPPECLELEVTESVVMQGLESVVQK 593 Query: 672 IEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDL 729 + L G++++IDDFGTG S+L + D +K+D F D+ G A I+R I + Sbjct: 594 MGILESHGIKLAIDDFGTGYSSLSYLRQFAIDRLKIDQSFVRDLPGDADAQAIIRAIVAM 653 Query: 730 ARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP---FSAWDKS 776 R + V+AEGVE+E AR L + C ++QGYLY +PM F AW K+ Sbjct: 654 GRSLGLRVMAEGVETEAQARFLQDIECTESQGYLYARPMKSNDFEAWLKT 703 >UniRef50_B8GM77 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GM77_THISH Length = 759 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 99/292 (33%), Positives = 160/292 (54%), Gaps = 9/292 (3%) Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAK--LNEIEENIWIARNIRHAMEIGE 542 P GE+ + + A+ ++D F FC ++ ++E + + +R A+ + Sbjct: 445 PEDGEDPVTLLKNADAAMYRVKD--FGRDGFCKFSQDLAEAVDERLALETALRQALRENQ 502 Query: 543 LFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAM 602 L + YQP++D+ ++ EAL RW AERG I+P FI +AE+ I LG + +TA+ Sbjct: 503 LQVHYQPVIDLAQGRMVAVEALARWRHAERGEIAPCSFIRLAEETKLILPLGGWMARTAI 562 Query: 603 GEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIE 662 G+FR + +R D + IN S +L +P F + + E+GL+ L +E+TE V+ Sbjct: 563 GQFRLWRERGMELD--YVSINTSGIELFDPGFVDGLFEALDEHGLEGRHLQIELTENVLM 620 Query: 663 RINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG-- 720 + E + +LR+QGVRI+IDDFGTG S+L ++ D +K+D F D+ G G Sbjct: 621 QDYEACRRVLLRLRQQGVRIAIDDFGTGYSSLAYLKQLPIDMLKIDRSFIKDVPGDPGDC 680 Query: 721 KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM-PFS 771 IV I +A + +AEGVE+E+ L+ +GC + QGY Y +P+ P S Sbjct: 681 AIVETIIAMAHRLGLATVAEGVETEEQEDYLLAIGCERLQGYRYARPLDPVS 732 >UniRef50_Q98BI1 Mll5564 protein n=2 Tax=Mesorhizobium RepID=Q98BI1_RHILO Length = 514 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 111/416 (26%), Positives = 192/416 (46%), Gaps = 17/416 (4%) Query: 365 NKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLC 424 +KL L++ G I A S + + + I + + + G + ++++R Sbjct: 86 DKLTGLLARPAMVGKIAEAACATSRTGEPVFLIDIDIDRFKQINDAIGYTQGDELIRAFT 145 Query: 425 QRIAEKYAQCCDIVTFNA-DLYLLLCRENVQTFTRKIA------MVNDFDSSFGYRNLRI 477 +R+ + A + +LL +Q + M+ ++ S +++ + Sbjct: 146 KRLQTCVPARAMVGRIGAGEFAVLLPDHQIQGTMESMVERLIDEMMEPYELSTHQQSVSL 205 Query: 478 HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHA 537 + P G + + LA+ + R + D + W+ + A Sbjct: 206 SVGIVAMPKDGVDPVLILRRSNLALQNARAGGVGNWSVFDSEMGRVADHRQWVESELHTA 265 Query: 538 MEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQI 597 E G+ L YQP +D+ T I+G EAL RW ERG+I P++FI IAE+ G IN +G + Sbjct: 266 FERGDFDLHYQPQLDLPTGRIIGYEALIRWNHPERGMIPPMEFIQIAEETGMINPIGEWV 325 Query: 598 IKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEIT 657 ++ A + H L DD + +N+SP Q F M+ G+K + L +E+T Sbjct: 326 LRKACSDAHH------LPDDCFVAVNISPVQFMTKDFVGIVRDTMRATGIKPSRLELEVT 379 Query: 658 ETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG 717 ET + + + +++L + G+ +++DDFGTG SNL + + +K+D F I G Sbjct: 380 ETAMMQDRDRAAAILKELAEMGISVAVDDFGTGYSNLSYLIDFSFGKLKIDRSFVSRI-G 438 Query: 718 T---AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPF 770 T +G +V I L+R + +IAEGVE+E A L GC QGYL+ +P P Sbjct: 439 TDSSSGAVVSTIVGLSRALGVSIIAEGVETESQATLLRAAGCEVVQGYLFGRPAPL 494 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 100/286 (34%), Positives = 156/286 (54%), Gaps = 8/286 (2%) Query: 500 LAISSIRDHMFSEFIFCDDAKLN-EIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAI 558 +A+ ++ + IF D K++ EI E I + ++R A+E GEL L YQPIVD+ I Sbjct: 543 IAMYRAKEQGRASMIF--DRKMHQEILEAISLETDLRQALEAGELLLHYQPIVDVKDSRI 600 Query: 559 LGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDF 618 +G EAL RW +RG++ P +FI +AE+ G I LG +I A + R + D Sbjct: 601 VGFEALVRWDHPDRGLVPPGQFIPLAEETGLILPLGRFVIDEACRQLRAWQLEMPEAADL 660 Query: 619 LLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQ 678 + +NVS Q + E ++ GL L +EITE+V+ EH + +L+ Sbjct: 661 SVSVNVSCRQFVKDGLVEHVAQVLAATGLPPACLKLEITESVLMHDAEHTARELNRLKAL 720 Query: 679 GVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTG--DIFGTAGKIVRIIFDLARYNRIP 736 GV+I+IDDFGTG S+L ++ D +K+D F G + +IV+ I LAR + Sbjct: 721 GVKIAIDDFGTGYSSLSYLRQLPIDHLKIDRSFISGQGCDGESQEIVKSIISLARSLGLT 780 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE 782 VIAEGVE D L C +AQG+++ +P+ +A +G+L+++ Sbjct: 781 VIAEGVECPDQLDRLRLADCDKAQGFMFSRPVEATA---AGRLIRQ 823 >UniRef50_A3YB61 Sensory box protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YB61_9GAMM Length = 914 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 99/292 (33%), Positives = 159/292 (54%), Gaps = 7/292 (2%) Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELF 544 P G +A S LA+ + + ++ D ++ + I IR+A+ E Sbjct: 609 PKDGTDALSLIRCADLAMYEAKQDPKNNSVYYDTGLEKKVIKRYEIESAIRYALLHEEFE 668 Query: 545 LVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGE 604 L YQP+V+ + IL EAL RW S+ G ISP FI+IAE+ G+IN +G+ +++ + + Sbjct: 669 LHYQPVVNPSNHEILSVEALIRWHSSSLGTISPAFFISIAEESGYINLIGHFVLEQVLAD 728 Query: 605 FRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERI 664 R + ++IN+SP QL + ER T++ +++ KA++L +EITE+ + + Sbjct: 729 LAQL--REVYGEHISININLSPHQLKDVILIERLTSLAQQDN-KASALILEITESTL--V 783 Query: 665 NEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVR 724 +E + QL+ QG RI++DDFGTG S+L + D +K+D F + +V Sbjct: 784 DEEAVHCLTQLQTQGYRIALDDFGTGFSSLSHIARMPIDILKIDQSFIAQSKHSERDLVL 843 Query: 725 I--IFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 + I +AR + +IAEGVE E+ A +LI+ GC QGYLY KP P + D Sbjct: 844 LKNIIAMARGLELKIIAEGVEYEEQANQLIEFGCFHMQGYLYAKPKPLAELD 895 >UniRef50_B5FFC2 Sensory box/ggdef family protein n=2 Tax=Vibrio fischeri RepID=B5FFC2_VIBFM Length = 845 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 90/256 (35%), Positives = 145/256 (56%), Gaps = 4/256 (1%) Query: 530 IARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGF 589 +A + HA++ EL YQP+V+ I GAEAL RW S +RG+ISP +FI +AED G Sbjct: 590 LAAELSHAIKNEELLPYYQPLVNFEDGKIHGAEALIRWHSPQRGLISPNEFIPLAEDNGM 649 Query: 590 INELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKA 649 I +G +++ A + +DF++H+NVS QL++ + +R + E+ LK Sbjct: 650 IINIGRMVLRQACIDTAQKIASGEWPEDFVMHVNVSTEQLHDGNSFQRLQDALIESSLKP 709 Query: 650 NSLCVEITETVIERINEHFYLN-IEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVD 708 +L +EI E+ + N+ F + + ++R GV I+IDDFGTG S+L + + D +K+D Sbjct: 710 KNLSLEIIESRLLN-NDIFIIELLNKVRALGVHIAIDDFGTGYSSLSYLHTLPFDCLKID 768 Query: 709 SQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQK 766 F + I I +A+ + ++AEG+E+++ A L LGC AQGYLY K Sbjct: 769 RSFVKSLTRENADTSITSAIIHMAKGFNVSIVAEGIETKEQAEILRSLGCDIAQGYLYSK 828 Query: 767 PMPFSAWDKSGKLVKE 782 P+P W++ L+ + Sbjct: 829 PLPIEQWEELSHLIHK 844 >UniRef50_B2UGH6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=30 Tax=Burkholderiaceae RepID=B2UGH6_RALPJ Length = 917 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 118/425 (27%), Positives = 199/425 (46%), Gaps = 38/425 (8%) Query: 373 YDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYA 432 + Q + A ++N +AV + L G + V G + + ++R + QR++ Sbjct: 499 FSQRMQAVMEQAASQANEGHQVAVLFLDLDGFKKVNDTAGHEAGDHLLRIVAQRLSACVR 558 Query: 433 QCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICEPLQGENAW 492 Q + D +++L +NV++ + +H +I +P Sbjct: 559 QSDTLARLGGDEFVVLL-DNVRSLGEAERLAKRI----------VH--SIAQPFSTSGTE 605 Query: 493 SY-AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEEN------IWIAR------------- 532 Y + +A+ + + + C DA + ++N ++ AR Sbjct: 606 YYLGASIGIALYPEHGNDAATLLRCADAAMYNAKQNGRNQHRVYTARLSQRAQRRFQLEY 665 Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 ++R A+ GEL L +QPIVD + I+GAE L RW S E G +SP +FI +AED G I + Sbjct: 666 HLRRALTAGELSLRFQPIVDATSMDIVGAEVLLRWHSTELGEVSPAEFIPVAEDAGLIGD 725 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 +G ++ A + H+ RA+ +F + +N+SP Q E + + E GL A++L Sbjct: 726 IGEWVLAQACRQAAHW--RATCMPEFFVAVNLSPRQFGE-GLVPTISRCLTEAGLPASAL 782 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +EITE ++ R ++ L G+RISIDDFGTG S+L D++KVD F Sbjct: 783 EMEITEGLLMRDTAAVMPMLDALTALGIRISIDDFGTGYSSLSYLQRFPIDNLKVDRSFV 842 Query: 713 GDIFGTAGKIV--RIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPF 770 I +V R + +A + V AEGVE+ + A L GC + QG+L+ PM Sbjct: 843 SGIPRHRDSVVISRAVVAMAASLDMTVTAEGVETLEQAEFLQAAGCDKLQGFLFGPPMTA 902 Query: 771 SAWDK 775 +A++ Sbjct: 903 AAYES 907 >UniRef50_B4REU2 Diguanylate phosphodiesterase n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4REU2_PHEZH Length = 771 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 116/422 (27%), Positives = 189/422 (44%), Gaps = 19/422 (4%) Query: 362 ERSNKLLSLISYDQESGFIKNMAIIE-------SNNNQYLAVGIIKLCGLEAVEAVFGVD 414 ER LL ++ E+G A++E + + +AV + L + + G Sbjct: 341 EREAALLHQAMHEPETGLPNRRALLEEIGRRMTGDRRRSVAVLAVGLDRVSVLRGAIGYG 400 Query: 415 ERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRN 474 +++VR++ RI E + ++ L +++ + ++ V D S + Sbjct: 401 RFHEVVRQVASRIGEASGEPLVAHLSSSVLGVVISARTAEALRTRVRRVERLDPSLAIED 460 Query: 475 LRIH---KSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIA 531 L + + +GE A + E +A+ R+ F +AK+ + N+ + Sbjct: 461 LPVDAFVRVGAAYRRRGETAETLLEHASIALDRARELDRRALAF-HEAKVGDPSLNLALM 519 Query: 532 RNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFIN 591 ++R + GEL L YQP V + + G EAL RW RG I+P I+ AE+ G I Sbjct: 520 SDMRRGLAAGELALHYQPKVHAKSGRVTGVEALVRWTHPSRGPIAPDLLISTAEETGMIR 579 Query: 592 ELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANS 651 L I A+ + + D + +NVS L + F ER T + AN Sbjct: 580 ALTEWGIAQAVADLGALG---AGGHDLTVAVNVSAGLLADRTFRERLT---RAAAGHANR 633 Query: 652 LCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQF 711 LC+EITE+ I R + I + R G++I+IDD+GTGLS+L I D +K+D Sbjct: 634 LCLEITESAIIRNPDEAMRAIAEFRAAGLKIAIDDYGTGLSSLSYLKLIEADELKLDKSL 693 Query: 712 TGDIFGTAGK--IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 + +A I++ DLA + V+AEGVE+ V L +GC QGYL K +P Sbjct: 694 VAAVNDSARDRLILKSTVDLAHSLGMSVVAEGVETRSVLAALAAMGCDVVQGYLVSKALP 753 Query: 770 FS 771 Sbjct: 754 IG 755 >UniRef50_B1Y3Y1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y3Y1_LEPCP Length = 730 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 121/456 (26%), Positives = 210/456 (46%), Gaps = 27/456 (5%) Query: 345 EIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNNQYLA--------- 395 E+ + ++ +M+ R ++ L D +G + N + +Q LA Sbjct: 255 EVGVLTQAMDDMRQNLARREARIAELAYRDDLTG-LANRTLFNDRLDQALASARRQGNAL 313 Query: 396 -VGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD---LYLLLCRE 451 V ++ L + V V G +++++++ +R+ + D V A LL ++ Sbjct: 314 SVLVLDLDRFKQVNDVLGHTLGDQVLKEVGERLRNALMRTTDTVARLAGDEFAVLLPTQD 373 Query: 452 NVQTFTRKIAMVNDFDSSFGYRNLRIHKSA----ICEPLQGENAWSYAEKLKLAISSIRD 507 + +++ +S + R+ SA C G +A + +A+ + Sbjct: 374 HAAATALGRRLLSVLESPVPVQGQRVDVSASIGIACADDAGLSAAQLMARADIAMHEAKQ 433 Query: 508 HMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRW 567 +F + A +E + + ++R A + E FL+YQP + ++ AE L RW Sbjct: 434 GNRGLLVF-EAAMERHVEHGLTLLSDLRRAADQHEFFLLYQPKLRLSDGHCDAAEVLIRW 492 Query: 568 VSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPW 627 +RGI+ P +FI AE G I + +++ A+ + + Q L L+INVS Sbjct: 493 RHPQRGIVPPDRFIPFAEQTGAIKAITLWVLQHALNQLASWQQ---LGWQLSLNINVSTR 549 Query: 628 QLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDF 687 L +P F ++ G+ A SLC+E+TE+ I ++ L + GVR+SIDDF Sbjct: 550 DLGQPDFPALVDNALRRAGVAAASLCLEVTESAIMDDPAQALRCLQALNEMGVRLSIDDF 609 Query: 688 GTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESE 745 GTG S+L ++ +K+D F + IVR DLA + + V+AEG+E+E Sbjct: 610 GTGYSSLAYLKKLPVQELKIDRSFVSGLDRDEADVTIVRSTIDLAHHMGLAVVAEGIETE 669 Query: 746 DVARELIKLGCVQAQGYLYQKPMP---FSAWDKSGK 778 V++ L GC QAQGYLY +P+P F AW K + Sbjct: 670 AVSQRLRSFGCDQAQGYLYSRPLPAMEFIAWLKQHR 705 >UniRef50_A0LW67 Diguanylate cyclase/phosphodiesterase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LW67_ACIC1 Length = 884 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 89/242 (36%), Positives = 140/242 (57%), Gaps = 5/242 (2%) Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 ++ A E GE + YQPIVD+ T + AEAL RWV ERG++ P FI+ AE+ G INE Sbjct: 617 DLERAAERGEFQVHYQPIVDLRTGRPVAAEALVRWVHPERGLLFPETFISEAENSGIINE 676 Query: 593 LGYQIIKTA---MGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKA 649 +G +++ A +G ++ +R + F + +N+SP Q +P + ++ G+ Sbjct: 677 IGRLVLRHACAHVGGWQQHVERKPGEPPFAVAVNLSPAQFAQPDLVAQIDEAVEAAGIDP 736 Query: 650 NSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDS 709 NSL +EITET++ + ++ ++ L GVR+++DDFGTG ++L ++ D IK+ Sbjct: 737 NSLILEITETMMLQGSDRVLRTLDLLSGFGVRLAMDDFGTGYASLASLRKLPIDIIKIAK 796 Query: 710 QFTGDIFGTAGK--IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKP 767 FT DI G K VR + +L + +AEGVE+ AREL +LGC QGY + +P Sbjct: 797 TFTDDITGNEEKSPFVRAMIELGEALGLVTLAEGVETAQQARELERLGCRLGQGYHFARP 856 Query: 768 MP 769 +P Sbjct: 857 VP 858 >UniRef50_B0UKA4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Methylobacterium RepID=B0UKA4_METS4 Length = 884 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 96/263 (36%), Positives = 139/263 (52%), Gaps = 8/263 (3%) Query: 522 NEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFI 581 ++E + I +R A++ E + YQP V + ++GAEAL RW ERG I P KFI Sbjct: 608 QRVQERLGIESELRRALKTREFSVHYQPKVSLADGRVVGAEALMRWHHPERGAIPPGKFI 667 Query: 582 TIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTI 641 IAE+ G I +LG +++ A+ E R D + +NVS QL +P F + Sbjct: 668 PIAEEAGLIPDLGVFVLERALAEIGELLARG---HDVTVAVNVSVLQLEDPTFAQTVEDR 724 Query: 642 MKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEIN 701 + GL + L +EITETV R ++ ++ +LR GVR+SIDDFGTG SNL Sbjct: 725 LARAGLPPSCLELEITETVAMRDSDTIQGHVTRLRGLGVRVSIDDFGTGYSNLATLARAP 784 Query: 702 PDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQA 759 D++K+D + G + IVR I LA + EGVE++ R L++ G A Sbjct: 785 IDALKLDRSLVDGVAGNPEQQTIVRTILSLAGSLGFETVVEGVETDADLRFLVEGGATTA 844 Query: 760 QGYLYQKPMP---FSAWDKSGKL 779 QGYL+ P+P F A + G+L Sbjct: 845 QGYLFSPPVPIETFRALLEPGRL 867 >UniRef50_B6ISE7 Sensory box-containing diguanylate cyclase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6ISE7_RHOCS Length = 742 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 86/244 (35%), Positives = 132/244 (54%), Gaps = 3/244 (1%) Query: 534 IRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINEL 593 +R A+E E+ L QP+VD+ R ++G EAL RW RG +SP +FI IAE+ G I L Sbjct: 487 LRRALERDEIGLALQPVVDLPGRRLIGFEALARWAHPGRGSVSPTEFIPIAEESGLIVAL 546 Query: 594 GYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLC 653 G +++ A R + R + + +NVSP QL P E ++ G+ L Sbjct: 547 GETVLRKACALLRSWQPRLN-GTPLTVSVNVSPVQLARPDLFELVDGVIAATGVDVRRLK 605 Query: 654 VEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTG 713 +E+TET + + + ++ LR++G RI IDDFGTG S+L R + + D +KVD F Sbjct: 606 LEVTETALAQDLDIVSSRLDGLRQRGFRILIDDFGTGYSSLSRLHRLPFDGLKVDQSFVR 665 Query: 714 DIFG--TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFS 771 + IVR + L + ++AEGVE + REL ++GC AQGY + +P+ + Sbjct: 666 PMLHDEDCRNIVRTVVALGHALGVDIVAEGVEDPETGRELARMGCTSAQGYHFGRPLSPA 725 Query: 772 AWDK 775 D+ Sbjct: 726 DADR 729 >UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B7KEN2_CYAP7 Length = 1471 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 88/238 (36%), Positives = 142/238 (59%), Gaps = 2/238 (0%) Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 N+R A+E EL + YQPIV + T +LG EAL RW ++G+ISP +FI IAE+ G I Sbjct: 1222 NLRLALEREELIVHYQPIVSLTTGKLLGFEALVRWEHPKKGLISPGEFIPIAEETGLIIP 1281 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 LG ++ + + + + + S D + +N+S QL PH +I+K+ GL+ +L Sbjct: 1282 LGEWVLLESCRQMKAWQKEFSGLDKIRVSVNLSGKQLEYPHLINCLESILKQTGLEGKNL 1341 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +EITE+++ E + Q++ + ++ISIDDFGTG S+L + + D++K+D F Sbjct: 1342 KLEITESMLMNNKEVVSDLLLQIKGKNIQISIDDFGTGYSSLSYLHYLPVDTLKIDRSFV 1401 Query: 713 GDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 + G +IV I +LA + ++ V+AEGVE+E ++L +LGC QGY + KP+ Sbjct: 1402 NRMTQLGENFEIVEAIINLAHHLQMDVVAEGVETEQHIKQLKQLGCESGQGYFFSKPL 1459 >UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8E7_9BURK Length = 633 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 85/257 (33%), Positives = 143/257 (55%), Gaps = 5/257 (1%) Query: 515 FCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGI 574 F +D + + + E++ + ++R A+ E L YQP+ D+++ +LGAEAL RW + + G+ Sbjct: 359 FSEDIR-SSVTESLHLISSLRQAVTQEEFVLHYQPVYDLHSGRLLGAEALVRWQNPKLGM 417 Query: 575 ISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHF 634 +SP FIT+AE G I ++G ++ A + + + Q+ + D + +N+SP Q + + Sbjct: 418 VSPGLFITLAEKSGLIVDIGQWVLTEACRQMQAWRQQGA--TDLFVSVNLSPVQFSRGNV 475 Query: 635 HERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNL 694 ++E GL L +E+TE+ + E F + +++ G+R+SIDDFGTG SNL Sbjct: 476 EAVIAQALRETGLDPRQLELEVTESTLIHDTEKFITTLGRIQHSGIRMSIDDFGTGYSNL 535 Query: 695 KRFYEINPDSIKVDSQFTGDIFGTAGKI--VRIIFDLARYNRIPVIAEGVESEDVARELI 752 +K+D F + + V I LA+ ++ V AEGVE+E L Sbjct: 536 SYLQRFPVHKLKIDQSFVRRLMQGQKDVAMVSAIIHLAKSLQLTVTAEGVENEATREALT 595 Query: 753 KLGCVQAQGYLYQKPMP 769 ++GC QAQGYL+ +PMP Sbjct: 596 RMGCDQAQGYLFARPMP 612 >UniRef50_C7R6X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6X9_KANKD Length = 855 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 98/303 (32%), Positives = 158/303 (52%), Gaps = 20/303 (6%) Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELF 544 P G + + + ++A S +D + F F +D + EN+ + +R A+E EL Sbjct: 560 PEDGRDPDTLLKNAEIARYSAKDKGRNSFEFFNDQLSEGMHENLMLESALRMAVERNELV 619 Query: 545 LVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGE 604 L YQP+V N ++G EAL RW +G+I P KFI +AE+ G I ++G +++ A + Sbjct: 620 LHYQPLVSFNDFTVVGVEALIRWQHPIQGLIPPYKFIPLAEETGIIGDIGLWVLREACRQ 679 Query: 605 FRHFSQ------RASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITE 658 + + RAS +N+S Q+ ++ +++KE GL A L +E+TE Sbjct: 680 MVEWDKAGLNVARAS--------VNISVQQIETGLLPKQVESVLKETGLAAERLYLELTE 731 Query: 659 TVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT 718 + I + + L + + +K GV++++DDFGTG S++ + D +K+D F DI Sbjct: 732 STIMQDPQQASLAMTEFQKMGVKLAVDDFGTGYSSMAYLKRLPLDRLKIDRSFIKDIGAD 791 Query: 719 AGK--IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP----FSA 772 I + I LA+ + +AEGVE E A L LGC AQGYLY KP+P ++ Sbjct: 792 TNDEVICKAIVQLAKSLGLETVAEGVEEESQAEFLKGLGCDVAQGYLYSKPVPALELTAS 851 Query: 773 WDK 775 W K Sbjct: 852 WKK 854 >UniRef50_C8SP16 Diguanylate cyclase/phosphodiesterase n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SP16_9RHIZ Length = 737 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 107/391 (27%), Positives = 184/391 (47%), Gaps = 17/391 (4%) Query: 389 NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL 448 + + LAV + L + V FG ++++R+ R+ + + D ++++ Sbjct: 337 STGEQLAVLYLDLDRFKQVNDTFGHPAGDELLREFADRLRRLTTEADTVARLGGDEFIII 396 Query: 449 CR-----ENVQTFTRKI--AMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKLA 501 R + V+T + + F + + + A P G K +A Sbjct: 397 KRSVAGEDEVRTLCEHLLESARRPFQVAGAQVFVGVSVGAAFAPRDGLEWVELVRKADVA 456 Query: 502 ISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEI-GELFLVYQPIVDINTRAILG 560 + + S + F + + +++R A++ G++ + YQP+ +T + G Sbjct: 457 LYHAKARGRSSYAFFATEMDQTLAMRKGLEQDLRSALQAPGQIQVYYQPLYTADTNRMAG 516 Query: 561 AEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLL 620 EAL RW ERG ++P F+ +AE++G + +LG +++ A + H+ L Sbjct: 517 VEALARWSHVERGWVAPDLFVPLAEEMGLVEQLGELVLRQACLDAVHWPIET-------L 569 Query: 621 HINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGV 680 +NVS QLN P F + T+I+ E + L +E+TE+ + + N+E LR GV Sbjct: 570 AVNVSALQLNNPSFAMKVTSILLETQMDPRRLELEVTESTLSQHRTECQQNVEALRSIGV 629 Query: 681 RISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVI 738 R ++DDFGTG S+L R + D IK+D F + G IV+ I DLAR + Sbjct: 630 RFALDDFGTGFSSLGRLQTLEVDRIKIDRSFVQGFGHSNGDEAIVQAIIDLARATGLSTT 689 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 AEGVE++ L KLGC Q QG+L +P+P Sbjct: 690 AEGVETDSQRNFLRKLGCDQLQGFLLSRPVP 720 >UniRef50_C7RT49 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RT49_9PROT Length = 745 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 118/421 (28%), Positives = 196/421 (46%), Gaps = 21/421 (4%) Query: 373 YDQESGFI-KNMAIIESNNNQYLA------VGIIKLCGLEAVEAVFGVDERNKIVRKLCQ 425 +D++ G +N I+E N +A + ++ + V + G + +++ Sbjct: 325 FDRQLGLPNRNALIVELNQRAQIAPNGDGVLAVVDVDQFATVNDILGQHYGDLVLKMTGA 384 Query: 426 RIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICEP 485 R+ E + I + D + ++ + V T I + F F +R SA Sbjct: 385 RLREFFGPVAYIARLSGDAFAVVGQREVVT-AEAIGLC--FAEPFSLMGIRQSVSASAGI 441 Query: 486 L---QG-ENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIG 541 + G Y + LA+ + ++ + NE+ + ++R A E Sbjct: 442 VFLNAGFRPGAEYVQDAYLALKRAKAAGLAQIVTYTADLANEVRSRARLLDDLRRAFEGH 501 Query: 542 ELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTA 601 L LVYQP +D+ T ++GAEAL RW + +I P +FI +AE G I ++G+ +++ A Sbjct: 502 RLHLVYQPQIDLATSRVIGAEALLRWRLPDGTMIPPDRFIPLAEQSGLIIDIGHWLLREA 561 Query: 602 MGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVI 661 M RA+ + + +NVSP +L P F + I+ E A+++ +EITE+V Sbjct: 562 MLALHRL--RAAGAPNLRMAVNVSPIELRRPDFADSVLQILGETATPADAVELEITESVA 619 Query: 662 ERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTA 719 + LR G+ ++IDDFGTG S+L + D +K+D F + A Sbjct: 620 VGGLAAAIETLAPLRDSGITVAIDDFGTGYSSLSYLERLPADRLKIDRSFVQGLERGQGA 679 Query: 720 GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM---PFSAWDKS 776 +I R I L R + VIAEGVE+E VA + LGC +AQGY + +PM F AW + Sbjct: 680 ARIPRTIIALGRELGLRVIAEGVENESVALAVRALGCHEAQGYHFARPMVEADFVAWLAA 739 Query: 777 G 777 G Sbjct: 740 G 740 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 109/366 (29%), Positives = 177/366 (48%), Gaps = 15/366 (4%) Query: 417 NKIVRKLCQRIAEKYAQCC----DIVTFNADLYLLLC---RENVQTFTRKIAMVNDFDSS 469 +KI L QR+A + +QC + D +++L R+ T ++ F Sbjct: 515 HKIGDTLIQRVASRMSQCVRDSDTVARLGGDEFMILSTDIRDERAAATLAQKLLRQFRQK 574 Query: 470 FGYRNLRIHKSAICE----PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIE 525 I SA P G+N A+ +D + F F N + Sbjct: 575 VAINGHEIIASASIGIAMFPKDGDNGDELFRNADTAMYRAKDVGRNGFQFYSAEMNNRMR 634 Query: 526 ENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAE 585 E +++ +++R+A+ + +L L YQP +D+ + ++ AEAL RW + G+ISP FI IAE Sbjct: 635 ERLYLEQSLRNAIGLHQLSLWYQPKLDLASGSVKSAEALIRWRHPQLGMISPGDFIPIAE 694 Query: 586 DIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKEN 645 + G I +G +I+ A + + R D + IN+S +QL+ ++ + Sbjct: 695 ETGLILPIGAWVIEEASRQLAKW--RDQENQDIRVAINISAYQLSHGKLTDQVIQALDSL 752 Query: 646 GLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSI 705 GL SL +E+TET I + ++ LR+ G+R+++DDFGTG S+L D + Sbjct: 753 GLDPQSLTIEVTETAIMPQMDKAVCELQSLREMGIRVALDDFGTGYSSLTYLKRFPIDIL 812 Query: 706 KVDSQFTGDIFG--TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYL 763 K+D F DI +G IV+ I +LA + V+AEGVE+E L GC + QGY Sbjct: 813 KIDRSFVSDIADDEESGAIVKTIINLAHNLNMTVVAEGVETEAQLEFLRTNGCDEVQGYY 872 Query: 764 YQKPMP 769 + KP+P Sbjct: 873 FCKPLP 878 >UniRef50_C9YBK5 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YBK5_9BURK Length = 577 Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 91/273 (33%), Positives = 149/273 (54%), Gaps = 8/273 (2%) Query: 500 LAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAIL 559 +A+ + F+F ++I E + + +++R A+E LF+VYQP +D+ + A++ Sbjct: 291 IALKRAKKSRRGSFVFFSAEMGSDIRERVRLLQSLRSAVESERLFIVYQPQIDLVSGAVI 350 Query: 560 GAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFL 619 G EAL RW + + + P +FI +AE G I +G +++ A E Q L D Sbjct: 351 GMEALIRWRNEDGTFVPPDRFIPLAEASGMIVAIGDWVLRMACHELVRL-QGLGLG-DVR 408 Query: 620 LHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQG 679 + +NVS Q P F ++ + + + N L +EITE+V E + +R+ G Sbjct: 409 MSVNVSQIQFRHPEFLDKLNAALLDTRISPNCLELEITESVAMEDAEFMLETLHGVRQLG 468 Query: 680 VRISIDDFGTGLSNLKRFYEINPDSIKVD----SQFTGDIFGTAGKIVRIIFDLARYNRI 735 + I+IDDFGTG S+L + ++ D +K+D S+ GD+ G G I ++ +L R ++ Sbjct: 469 ISIAIDDFGTGYSSLSQLRQLPIDRLKIDRAFVSELGGDVLG--GHIASMVIELGRNLQL 526 Query: 736 PVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 VIAEG+E+ + A L LGC + QGYLY KPM Sbjct: 527 KVIAEGIETPEQASRLKDLGCHEGQGYLYAKPM 559 >UniRef50_P64825 Uncharacterized protein Rv1354c/MT1397 n=32 Tax=Corynebacterineae RepID=Y1354_MYCTU Length = 623 Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 134/458 (29%), Positives = 218/458 (47%), Gaps = 30/458 (6%) Query: 337 KIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAV 396 K E + +++I A+++ A + +L L +D +G A+++ + +Q LA Sbjct: 151 KWHEAELNALMTIATLFAQVQ-ARVAAEARLRYLADHDDLTGLHNRRALLQ-HLDQRLAP 208 Query: 397 G--------IIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLL- 447 G + L L+A+ G ++ + QRI + I D ++L Sbjct: 209 GQPGPVAALFLDLDRLKAINDYLGHAAGDQFIHVFAQRIGDALVGESLIARLGGDEFVLI 268 Query: 448 ----LCRENVQTFTRKIA-MVNDFDSSFGYRNLRIHKSAICEPLQGENAWS----YAEKL 498 + + Q ++ + D + G R + G++ S A++ Sbjct: 269 PASPMSADAAQPLAERLRDQLKDHVAIGGEVLTRTVSIGVASGTPGQHTPSDLLRRADQA 328 Query: 499 KLAISSIRDHMFSEFIFCDDAKLN-EIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 LA S IF D ++ E+ +I + ++R +E L LVY P VD+ T Sbjct: 329 ALAAKHAGGD--SVAIFTADMSVSGELRNDIEL--HLRRGIESDALRLVYLPEVDLRTGD 384 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 I+G EAL RW RG+++P FI +AE I EL +++ A EF + Q A L D Sbjct: 385 IVGTEALVRWQHPTRGLLAPGCFIPVAESINLAGELDRWVLRRACNEFSEW-QSAGLGHD 443 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK 677 LL INVS QL F + + ++GL A+S+C+EITE V+ + + +L++ Sbjct: 444 ALLRINVSAGQLVTGGFVDFVADTIGQHGLDASSVCLEITENVVVQDLHTARATLARLKE 503 Query: 678 QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK---IVRIIFDLARYNR 734 GV I+IDDFGTG S + + D++K+D F + GT IVR I LA + Sbjct: 504 VGVHIAIDDFGTGYSAISLLQTLPIDTLKIDKTFVRQL-GTNTSDLVIVRGIMTLAEGFQ 562 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 + V+AEGVE+E AR L+ C +AQG+L+ +P+P A Sbjct: 563 LDVVAEGVETEAAARILLDQRCYRAQGFLFSRPVPGEA 600 >UniRef50_UPI0001C42D3B diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42D3B Length = 656 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 128/448 (28%), Positives = 212/448 (47%), Gaps = 36/448 (8%) Query: 346 IISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--------NNNQYLAVG 397 ++SI+N I E K E ++ L +D+ +G + A E +++ + V Sbjct: 204 LVSIRN-ITERKKQE----EQITYLAYHDEVTGLLNRRAFQERMKEQLNALKSDESVVVA 258 Query: 398 IIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLL-LCRENVQTF 456 I L L+ V G++ N++V+++ + EK + +D ++L N Q Sbjct: 259 TIGLNRLKTVNDAMGIEAGNRLVKEVSHLLNEKCLPRIHLARLGSDEFILSFIESNPQDA 318 Query: 457 TRKIAMVND----------FDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKLAISSIR 506 I +N+ D + + NL + S L N + ++A+ +I+ Sbjct: 319 V--IPFINNILECFNEPLQLDEFYFHVNLSVGLSISSNALIDVN--ELIRQAEVALHTIK 374 Query: 507 DHMFSEFIFCD-DAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALC 565 D F + + I E I I +RHA+ E LV+ P + + + G EAL Sbjct: 375 DSTHGSIQFYEKEMSTGSIREMI-IENELRHAIAKNEFTLVFHPQACLESGDLSGVEALL 433 Query: 566 RWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQR--ASLKDDFLLHIN 623 RW S+ G++SP +FI +AE G I +G +I+ A H++ + L + +N Sbjct: 434 RWKSSALGMVSPFEFIEVAEKTGLIIPIGKWVIEQAC----HYALQLERELGRPVKMAVN 489 Query: 624 VSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRIS 683 +SP Q +P+ E T ++E GL A+SL +EITE+V H + LR+ GV +S Sbjct: 490 LSPVQFVQPNLVEIITNALEEAGLNASSLELEITESVAMEDEAHVMEKLTALRELGVHVS 549 Query: 684 IDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIAEGVE 743 IDDFGTG S+L+ + D +K+D F T I++ I + + VIAEGVE Sbjct: 550 IDDFGTGYSSLQYLSQYPIDKLKIDKSFLRVQTNTNQTIIKSIVSMGHNMGMKVIAEGVE 609 Query: 744 SEDVARELIKLGCVQAQGYLYQKPMPFS 771 S D L L C + QG+++ KP+PF+ Sbjct: 610 SYDHVALLRSLDCDEMQGFVWTKPLPFT 637 >UniRef50_B5ZWQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=14 Tax=Rhizobium/Agrobacterium group RepID=B5ZWQ7_RHILW Length = 794 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 119/398 (29%), Positives = 189/398 (47%), Gaps = 17/398 (4%) Query: 380 IKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVT 439 I+ + N +A+ + L +AV +FG E ++I+RK+ + + I Sbjct: 370 IRQALQVAERKNTEVALFCLDLDRFKAVNDIFGHAEGDRILRKVAAILRRVAGESDTIAR 429 Query: 440 FNADLYLLLCRENVQTFT-RKIA--MVNDF----DSSFGYRNLRIHKSAICEPLQGENAW 492 D + ++ + Q + +K+A ++++F D++ + + P G A Sbjct: 430 LGGDEFAIIQSDGQQPASAQKLAADIIDEFAAEMDTARDPTAVGVSLGIALYPRDGSTAE 489 Query: 493 SYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENI-WIARNIRHAMEIGELFLVYQPIV 551 A+ ++ F D A+++E N I ++RHA+ +L + YQPI+ Sbjct: 490 ELCNNADTALYRVKHDGRGRACFFD-AEMDEAARNRRQIESDLRHAIIRNQLHVSYQPIL 548 Query: 552 DINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQR 611 + + I G EAL RW G+ P FI +AE+ G I +LG I++ A E + Q Sbjct: 549 NAQSVEISGYEALMRWHRPGHGLTEPDIFIPVAEESGSIVQLGEWILQQACREAARWPQ- 607 Query: 612 ASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLN 671 + +NVSP Q P+ ER ++ E GL + L +EITE + R + Sbjct: 608 -----PLTIAVNVSPVQFMLPNLCERVEAVLDETGLAPDRLELEITEAALIRDRDRVMAT 662 Query: 672 IEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDL 729 +++LRK GV I +DDFGTG S+L D IKVD FTG + A IVR I L Sbjct: 663 LQRLRKLGVHIVMDDFGTGYSSLSNLRSFPFDKIKVDRSFTGVLEHDAAARSIVRAIIGL 722 Query: 730 ARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKP 767 +PV+ EGVE+E R +++ GC Q QG L KP Sbjct: 723 GHSLGMPVVTEGVETEMQRRIVVEEGCAQVQGLLLGKP 760 >UniRef50_B8KDR3 Sensory box/ggdef family protein n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8KDR3_VIBPA Length = 825 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 130/494 (26%), Positives = 236/494 (47%), Gaps = 55/494 (11%) Query: 294 IIIVLLVVY--LMTTRVFRRQFSEMTELVNT-LAFLPDSTDQIEALKIREGDAKEIISIK 350 +I L+V LM +++ +F +N+ + L + D++E + + + E+ + Sbjct: 354 VITTLIVALFSLMMSKLIASRFERFQSKINSDFSQLQQTKDKLEHMALHD----ELTGLP 409 Query: 351 NS--IAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVE 408 N + E +A IERS + Q LAV + L + V Sbjct: 410 NRSLLHEHINAGIERSR-----------------------SQCQQLAVMFVDLDDFKKVN 446 Query: 409 AVFGVDERNKIVRKLCQRIAEKYAQCCDIVT-FNADLYLLLCRE--NVQTFTRKIAMVND 465 ++G ++++ ++ ++ E + Q + V F D ++ E N+ +K+ ++ D Sbjct: 447 DLYGHSAGDRLLSEIGKKF-EAFLQPDEFVARFGGDEFIFCFPELNNLAETEKKVELIKD 505 Query: 466 -FDSSFGYRNLRIHKSAICE------PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDD 518 F F N ++ S C P G+ K + + + + +F D Sbjct: 506 VFKQQFVIDNKVLYAS--CSIGVSMFPTDGDEPEDLISKADIVLYKSKARQKGDVLFFDS 563 Query: 519 AKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPL 578 +++ + + R +R A+E GEL +VYQP ++ T I G E+L RW + + G +SPL Sbjct: 564 TINQQVQYDFLLERELRGAIERGELSVVYQPQINAKTGKIYGVESLLRWHNPQLGHVSPL 623 Query: 579 KFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERF 638 +FIT+AE+IG I+ELG +++ + E + D L +N+SP QL F + Sbjct: 624 EFITLAEEIGLISELGEFVLERSCEEINKIFPDS----DLALSVNISPMQLVNESFVTQL 679 Query: 639 TTIMKENGLKANSLCVEITETVIERINEHFYLN--IEQLRKQGVRISIDDFGTGLSNLKR 696 + ++ + N + +EITE V+ IN+ + I QL++ G IS+DDFGTG S+L Sbjct: 680 LSASAKHAMPPNRITLEITENVL--INDLPKVTPIINQLKELGFTISLDDFGTGYSSLSY 737 Query: 697 FYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKL 754 + D +K+D F + + + +V+ I +AR + + V+AEGVE++ LI+ Sbjct: 738 LSNLPLDELKIDRVFIDKMLNSEQSNSLVKAILAIARSSDMRVVAEGVETQAQKVRLIEY 797 Query: 755 GCVQAQGYLYQKPM 768 GC QGY ++P+ Sbjct: 798 GCDLLQGYFIERPL 811 >UniRef50_B0CE49 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor, putative n=2 Tax=Acaryochloris marina MBIC11017 RepID=B0CE49_ACAM1 Length = 880 Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 87/247 (35%), Positives = 140/247 (56%), Gaps = 1/247 (0%) Query: 523 EIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFIT 582 ++ + + +++ A+ EL LVYQPIVD+NT I+G EAL RW ERG++ P +FI Sbjct: 609 QVNSQLQLETDLQRAISNNELHLVYQPIVDLNTENIVGFEALLRWNHPERGLVPPSEFIP 668 Query: 583 IAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIM 642 +AED G + + + ++ A + H+ + +++N+S Q + F E+ I+ Sbjct: 669 VAEDAGLMVSIDWWVLTEACQQMAHWLNIYPGSTELTINVNISAHQFLQSTFCEKVNAII 728 Query: 643 KENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINP 702 +E G+K + L +EITE VI + + L+K G+ ++IDDFGTG S+L Y Sbjct: 729 QETGMKPHHLKLEITEGVILSNAPNISEQLNNLKKLGIHLAIDDFGTGYSSLSYLYAFPL 788 Query: 703 DSIKVDSQFTGDIFGTAG-KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQG 761 D +KVD F + G IVR I +L + + V+AEGVE++ L ++GC AQG Sbjct: 789 DVLKVDYSFVSRMDQDNGLAIVRTIVNLGQNLNMKVVAEGVETKIQQEYLQEMGCEFAQG 848 Query: 762 YLYQKPM 768 YL+ +P+ Sbjct: 849 YLFSRPL 855 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 96/254 (37%), Positives = 143/254 (56%), Gaps = 5/254 (1%) Query: 519 AKLNE-IEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISP 577 A++N + + + + +R A+ + L YQP V + + I+GAEAL RW SA G++SP Sbjct: 438 AEMNSSVTDRLELLNRLRQAITNEDFVLHYQPKVSLASHQIIGAEALVRWNSAHSGMVSP 497 Query: 578 LKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHER 637 FI +AE+ G I LG +++TA + R + Q A + +N+SP QL E Sbjct: 498 ASFIPLAEETGLIIPLGEWVLRTACRQNRAW-QDAGYPP-IPISVNLSPRQLARGDIVEV 555 Query: 638 FTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRF 697 I+ E GL+A L +EITE+V+ E + + QLR GV+IS+DDFGTG S+L Sbjct: 556 VERILTETGLEAQHLELEITESVMTTDVEKSFALLTQLRSLGVKISLDDFGTGYSSLSYL 615 Query: 698 YEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLG 755 D++K+D F DI + IV+ I L R + V+AEG+E+ED + L+ G Sbjct: 616 KRFPVDTLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVLAEGIETEDQFQFLLANG 675 Query: 756 CVQAQGYLYQKPMP 769 C + QGYL KP+P Sbjct: 676 CDEGQGYLMSKPVP 689 >UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5F7_AZOSB Length = 576 Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 111/373 (29%), Positives = 185/373 (49%), Gaps = 14/373 (3%) Query: 407 VEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIA---MV 463 + A FG D N I+R+L +R+A A + +D + + V+ +IA ++ Sbjct: 197 INASFGYDTGNVILRQLGERLAAGLAADVMLARLGSDRFGVFLPGVVEREQAEIAARWLL 256 Query: 464 NDFDSSFGYRNLRIHKSA-ICEPLQGENAWSYAEKL---KLAISSIRDHMFSEFIFCDDA 519 F+ F ++ + +A + + G + E L + A++ ++ + C D Sbjct: 257 RAFEQPFMKNDIELFLTASVGIAMVGGDGADVFELLMNAEAAVARVKCQG-GNGVRCYDR 315 Query: 520 KLNEIE-ENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPL 578 +N E + + +RHA+E GEL L YQPIVD + + AEAL RW E+G+++P Sbjct: 316 AMNAASAERLTLEAELRHAVERGELRLFYQPIVDPDG-TVRAAEALVRWQHPEQGLLAPD 374 Query: 579 KFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERF 638 +FI +A++ G I E+G ++ A + R + + F + +NVS Q +P E Sbjct: 375 RFIPLADETGLITEIGAWVLTEACYQGRCWHDAG--HERFRVSVNVSAVQFGQPRLLETV 432 Query: 639 TTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFY 698 ++ +G L +EITE+ + E + L+ GVRI++DDFGTG S+L Sbjct: 433 REALRGSGFPPACLTLEITESSLMSDVESAAGMLRSLKNMGVRIAVDDFGTGYSSLSYLR 492 Query: 699 EINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGC 756 + D++K+D F D+ G IVR I LA + +AEGVE+ + L + GC Sbjct: 493 RLPIDTVKIDKSFVRDVSNNGEDAAIVRAIIALAHSLGLGTVAEGVETAEQEATLRREGC 552 Query: 757 VQAQGYLYQKPMP 769 QGY Y +P+P Sbjct: 553 DSFQGYRYGRPVP 565 >UniRef50_B6A161 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B6A161_RHILW Length = 721 Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 107/385 (27%), Positives = 187/385 (48%), Gaps = 30/385 (7%) Query: 398 IIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENV-QTF 456 +I L G + V +G ++++R + R+ + + D + ++ R+ V + Sbjct: 333 MIDLDGFKPVNDAWGHAVGDELLRSVAARLVDHLPDGAIVARLGGDEFAVISRDQVLKDG 392 Query: 457 TRKIAMVNDFDSSF--GYRNLRIHKSA----ICEPLQGENAWSYAEKLKLAISSIRDH-- 508 ++ S F G R + I S + +P G NA + LA+ +D Sbjct: 393 ALAARILTSLSSPFVIGGRTIEISCSVGAANMSDP--GTNAAELLRRADLALYRSKDMGR 450 Query: 509 ----MFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEAL 564 ++S + D A +++E+ + RHA+ G++ V+QP+VD TR I G EAL Sbjct: 451 GRSMIYSPSLDEDAANTSDLEQEL------RHALASGQIRTVFQPLVDATTREIRGVEAL 504 Query: 565 CRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINV 624 RW SA RG ++P FI++AE G I++LG+++++ ++ E AS + +NV Sbjct: 505 ARWKSATRGDVTPEVFISLAERAGLIDQLGFEVLRLSVRE-------ASRWPGVGVAVNV 557 Query: 625 SPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISI 684 SP QL P+F + I+ + L +E+TE V+ + + LR G++I++ Sbjct: 558 SPLQLRNPYFASQVGDILAQADFDPMRLTIEVTEGVLISNPDQAKRAFKTLRNMGIKIAL 617 Query: 685 DDFGTGLSNLKRFYEINPDSIKVDSQF--TGDIFGTAGKIVRIIFDLARYNRIPVIAEGV 742 DDFG G +++ E D +K+D D G ++ LA +PV AEG+ Sbjct: 618 DDFGCGYASIGALREFGFDRMKIDRSLIVALDHDDRDGAVLHATIALANALHLPVTAEGI 677 Query: 743 ESEDVARELIKLGCVQAQGYLYQKP 767 E+E+ A + GC + QGYL+ +P Sbjct: 678 ETEEQAAAVRLSGCDELQGYLFSRP 702 >UniRef50_C9RWE1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacillus RepID=C9RWE1_GEOSY Length = 818 Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 113/439 (25%), Positives = 214/439 (48%), Gaps = 25/439 (5%) Query: 350 KNSIAEMKDAEIERSN--KLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGI 398 K ++A ++D ++ N ++ + ++D+ +G A+ ++ + +AV Sbjct: 367 KVTVAAVRDLTEQKQNEERMRYIANHDELTGLPNKEAMYKAVERCLAEAKQHRHEMAVIF 426 Query: 399 IKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTR 458 +++ G++ + +G ++++ L Q EK Q I ++ + ++ + + Sbjct: 427 LEVSGMKTINDFYGYAVGDEVLLHLAQEWKEK--QGMAIGRWSGNEFIAVVSNSTHQKAE 484 Query: 459 KIA--MVNDFDSSFGYRNLRIHKSA----ICEPLQGENAWSYAEKLKLAISSIRDHMFSE 512 ++A ++ D + ++ + P GE+A + K +A R S+ Sbjct: 485 EMAKQLIEAADEPIVVNGMELYVTVNIGISVYPKDGEDAKTLIRKADIARYEARKKAASD 544 Query: 513 FIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAER 572 F+F + + E + + R++R A+E E L YQP + ++ R ++G EAL RW E+ Sbjct: 545 FLFFTEPMAIRLHEKMAMERDLRRALENEEFELYYQPQIRLHDRQVIGMEALIRWRHPEK 604 Query: 573 GIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEP 632 G++SP FI +AE G I + +I+TA + + R D + IN+SP++ Sbjct: 605 GMVSPSLFIPVAEQTGMIIPINEWVIRTACEQTKQLLDRFP---DLSVSINLSPYEFESR 661 Query: 633 HFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNI-EQLRKQGVRISIDDFGTGL 691 F ++ ++ + GL + L +EITE + ++ L+I +L+ GV IS+DDFGTG Sbjct: 662 RFVDKLARLLADAGLPPHHLDLEITERMT--MDTERALDILSKLKGLGVTISMDDFGTGY 719 Query: 692 SNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVAREL 751 S+L ++ D +K+D F I G I+ I L + V+AEGVE+E A L Sbjct: 720 SSLSYLTDLPIDRLKIDRSFVQHIQGKKDVILPAIIRLGHNIGVKVLAEGVETETEAAYL 779 Query: 752 IKLGCVQAQGYLYQKPMPF 770 C +AQGY + P+P+ Sbjct: 780 QGKRCDEAQGYYFSPPLPY 798 >UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K569_AZOSB Length = 947 Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 106/364 (29%), Positives = 173/364 (47%), Gaps = 15/364 (4%) Query: 417 NKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE---NVQTFTRKIAMVNDFDSSFGYR 473 + ++R+ +R+A I D +++L E R +++ F + F Sbjct: 565 DALLRQAAKRLASLLHGGDTIARPGGDEFVMLLAEITDRAVAANRAAQIIDAFSTPFRVE 624 Query: 474 NLRIHKSA----ICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIW 529 + + + P G +A + A+ ++ + + F D + E + Sbjct: 625 HYELSVTPSIGIAIAPDDGVDADTLLRNADAAMYHAKESGRNTYRFFTDEMSLRVRERLE 684 Query: 530 IARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGF 589 + +R AM E + YQP ++ ILG EAL RW ERG+I+P +FI +AED G Sbjct: 685 LENLLRQAMSRDEFEVFYQPQFGLSDHRILGCEALVRWRHPERGLIAPERFIPLAEDTGL 744 Query: 590 INELGYQIIKTAMGEFRHFSQ--RASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGL 647 I +G ++++TA H +Q RA+ D + +N SP Q++ +F E ++ E GL Sbjct: 745 IVAIGRRVLETAC----HTAQGWRAAGLGDIPVAVNASPVQIHHGNFAETVAEVLAETGL 800 Query: 648 KANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKV 707 A L +E+TE+ + + L+ GVR++IDDFGTG S+L D +K+ Sbjct: 801 PARLLEIELTESTLMADAAPVAATLAALQDMGVRLAIDDFGTGYSSLAYLKRFQLDKLKI 860 Query: 708 DSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQ 765 D F D+ G I I +AR + VIAEGVE+ R L+ GC + QGYL+ Sbjct: 861 DRSFINDLPGDPDDANITVAIIGIARSLGMSVIAEGVETAAQERFLVDQGCAEGQGYLFS 920 Query: 766 KPMP 769 P+P Sbjct: 921 PPVP 924 >UniRef50_A6FA54 Sensory box/GGDEF family protein n=1 Tax=Moritella sp. PE36 RepID=A6FA54_9GAMM Length = 848 Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 85/258 (32%), Positives = 137/258 (53%), Gaps = 2/258 (0%) Query: 518 DAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISP 577 D + +E + ++ A+ E + YQPI+D+ T + GAEAL RW S RG++SP Sbjct: 577 DYMITASQEQTRLTAELQRAITNHEFQVYYQPIIDLKTDQVSGAEALVRWHSPTRGLVSP 636 Query: 578 LKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHER 637 L FI +AE G I ++G Q++ A + + + + F LH+N+S +L P + Sbjct: 637 LDFIPLAESTGMIIDIGQQVLTQACSDTKQQIDKGLWPNAFSLHVNLSVRELLHPLYVTT 696 Query: 638 FTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRF 697 I+ L A +L +E+TE+ + +EQLR G+ I+IDDFGTG S+L Sbjct: 697 VKQILATTQLPAANLTLEVTESRLVSQPALTNKTLEQLRDLGIHIAIDDFGTGYSSLAYL 756 Query: 698 YEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIPVIAEGVESEDVARELIKLG 755 ++ D++KVD F + + I+ I + ++AEGVE+ + A+ L +LG Sbjct: 757 TQLPFDALKVDRSFVSQMLESKSHTAIIAAIVTITNVFNAEIVAEGVETAEQAQRLKQLG 816 Query: 756 CVQAQGYLYQKPMPFSAW 773 C AQG+ Y +P P + W Sbjct: 817 CRYAQGFYYSRPKPLAEW 834 >UniRef50_A1U2P2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U2P2_MARAV Length = 768 Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 111/426 (26%), Positives = 207/426 (48%), Gaps = 17/426 (3%) Query: 359 AEIERSNKLLSLISYDQESGFIKNMAIIES-----NNNQYLAVGIIKLCGLEAVEAVFGV 413 AE ER +LL +D +G + +++ + + ++ +I + + FG+ Sbjct: 325 AEGERREELLYRARHDDLTGLLNRAGLLDRLEGRLSQARPFSLVVINIDNFSGINDRFGL 384 Query: 414 DERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC-RENVQTFTRKI-AMVNDFDSSFG 471 + + + + +R+ + D+ +D + ++ N+ + T A+V D F Sbjct: 385 EYGDHTLVEFGRRLERLAERHDDLARLGSDEFAIVTPNTNIPSLTDACRALVEDLAQIFE 444 Query: 472 YRNLRIHKSAICE----PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEEN 527 LR+ A P G++ LA+ + + ++ + + + Sbjct: 445 VGRLRLQVGASVGVARYPEDGDSLSKLIRSAHLALYEAKQSRNAVCVYKAEMETAYLR-R 503 Query: 528 IWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDI 587 + + + +R+ + L++VYQP V+ + +G EAL RW E G +SP +F+ +AE Sbjct: 504 LNVEQRLRYGLASHALYMVYQPQVN-DAGETIGLEALVRWQDEELGFVSPAEFVDVAEKS 562 Query: 588 GFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGL 647 G + LG ++ T++ EFR + +K L IN+S Q +P F + +K + + Sbjct: 563 GLMIPLGNFVLDTSLREFRQLIDK--VKQPLDLAINISVIQFCQPGFVDTVLNALKTHDV 620 Query: 648 KANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKV 707 +SL +EITET+ + I LR G+R+++DDFGTG S+L ++ D +K+ Sbjct: 621 SPSSLVLEITETLFMGNFDQVLQTICDLRSHGIRLAMDDFGTGYSSLSLLRQLPLDELKI 680 Query: 708 DSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQ 765 D F I A +VR I +AR + + +IAEGVE + A+ LIK+GC++ QGY + Sbjct: 681 DKSFVDGIVEDEKAANMVRSIVAIARSHNMSLIAEGVEEQAQAQALIKMGCLRFQGYYFS 740 Query: 766 KPMPFS 771 +P+P + Sbjct: 741 RPVPMA 746 >UniRef50_B9Z5M4 Diguanylate cyclase/phosphodiesterase with GAF sensor n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z5M4_9NEIS Length = 920 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 111/381 (29%), Positives = 187/381 (49%), Gaps = 14/381 (3%) Query: 398 IIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD--LYLLLCRENVQT 455 I+ L L + ++G D ++++ LC+R+A + A+ ++V A+ L+L ++ + Sbjct: 518 ILALDALPNLNELYGHDTGDQVILLLCERLA-RLAEPGELVARVAENRFCLILLGKDESS 576 Query: 456 FTRKIAMVND-----FDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMF 510 R++ +N+ D + +R+ P + E +LA+ R + Sbjct: 577 INRRVTAINETLNLPLDVNAQLIGVRVSAGLALSPQDSKEPLRLLEHAELAMQISRSSIQ 636 Query: 511 SEFI-FCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVS 569 ++ F +D + ++ I +R A+ +LFL YQP D+ TR GAEAL RW Sbjct: 637 GGWVRFHEDMSTDWHRRHLLI-NELRQAIGTHQLFLCYQPYHDLKTRRTRGAEALLRWHH 695 Query: 570 AERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQL 629 E G ISP +FI +AED G I LG ++ A + + Q + +F + +NVS QL Sbjct: 696 PEHGFISPGEFIPLAEDSGVIVPLGEWALREACQQTAKWRQGG--QPEFTISVNVSLLQL 753 Query: 630 NEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGT 689 +PHF + I+ L ++L +E+TET+ R + NI +L+ GV ++IDDFGT Sbjct: 754 EDPHFADLVAGILATAHLPPSALELEVTETLALRQSGSIEDNIRRLKALGVSLAIDDFGT 813 Query: 690 GLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDV 747 G ++ + IK+D QF + IVR+I + V EG+E+E Sbjct: 814 GYASFSYLRRFPAEKIKIDKQFLDQVPDNHQDAAIVRMIVAMGHSLGAMVTGEGIENERQ 873 Query: 748 ARELIKLGCVQAQGYLYQKPM 768 L ++GC AQG+ KP+ Sbjct: 874 LAFLAEIGCDYAQGFHLSKPL 894 >UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XRM5_DESMR Length = 821 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 89/249 (35%), Positives = 141/249 (56%), Gaps = 2/249 (0%) Query: 522 NEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFI 581 EI + I + ++R A++ GEL L YQPIVD+ T I G EAL RW +RG++ P++FI Sbjct: 553 QEILDAINLEADLRAALDRGELLLHYQPIVDVQTGRIEGFEALVRWDHPDRGLVPPVQFI 612 Query: 582 TIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTI 641 +AE+ G I LG +I A + R + + + +NVS Q + + + Sbjct: 613 PLAEETGLIQPLGRFVIAEACRQLRAWQLELPEAEQLSVSVNVSCHQFVKEGLVDHVAGV 672 Query: 642 MKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEIN 701 ++ GL L +EITE+V+ +H + +L+ GV+I+IDDFGTG S+L ++ Sbjct: 673 LETTGLDPACLKLEITESVLMHDAQHTAGELSRLKALGVKIAIDDFGTGYSSLSYLRQLP 732 Query: 702 PDSIKVDSQFTG--DIFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQA 759 D +K+D F D+ G + +IV+ I LAR + VIAEGVE +D +L C +A Sbjct: 733 IDHLKIDRSFISGDDVNGESQEIVKSIIALARSLGLTVIAEGVEHQDQLDKLRNADCDKA 792 Query: 760 QGYLYQKPM 768 QG+++ +P+ Sbjct: 793 QGFMFSRPV 801 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 100/294 (34%), Positives = 161/294 (54%), Gaps = 8/294 (2%) Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELF 544 P G+N ++ A+ +++ + + F D + + E I + +R A+E + Sbjct: 413 PQDGDNPEDLLKRADTALYTVKSRGKNGYDFFDPSMEAKSLERILMENEMRKAIEQEQFQ 472 Query: 545 LVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGE 604 + YQP +DI T A+ G EAL RWV E GII P +FI IAE+ G I LG I+K A + Sbjct: 473 IYYQPKIDIATSAMTGMEALVRWVHPELGIIPPNRFIPIAEETGMILALGEWILKQACKQ 532 Query: 605 FRHF-SQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIER 663 +++ Q +LK + +N+S Q+ + E I++E L + L +EITE++ + Sbjct: 533 NKNWHDQGYTLK----VSVNLSARQIYQKDLVEMIKDILQETKLSPHWLELEITESIFVK 588 Query: 664 INEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGK 721 + E + ++Q+R G++ISIDDFGTG S+ + D+IK+D+ F DI + Sbjct: 589 MEEATAV-LQQIRDIGIQISIDDFGTGYSSFSYIKSLPVDTIKIDASFIRDIHHNQESQA 647 Query: 722 IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 IV+ I +A+ + VIAEG+E D L + GC QGYL+ KP+P +D+ Sbjct: 648 IVKAIVTIAQSLNMNVIAEGIELHDQVAALKENGCDHGQGYLFSKPLPTDDFDQ 701 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 130/456 (28%), Positives = 208/456 (45%), Gaps = 53/456 (11%) Query: 353 IAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE---------SNNNQYLAVGIIKLCG 403 I + K AE +K+ L YDQ +G ++E N QY A+ + L Sbjct: 467 ITQRKAAE----SKIKQLAFYDQLTGLPNRQLLMERLESARLNSQRNGQYGAILYLDLDD 522 Query: 404 LEAVEAVFGVDERNKIVRKLCQR---------------------IAEKYAQCCDIVTFNA 442 + + G D +K + + QR I E+ DI + A Sbjct: 523 FKTLNDTRGHDTGDKFLTLVSQRLLDCVRRTDTVARIGGDEFVIILEQLDSDLDIASKRA 582 Query: 443 DLYLLLCRENVQTFTRK--IAMVNDFDS-SFGYRNLRIHKSAICEPLQGENAWSYAEKLK 499 DL LCR+ + T ++ I + F + S G I E L+ + Sbjct: 583 DL---LCRKILDTLSKPYYIDNIEHFSTLSIGVTLFLGETKGIDELLKHAD--------- 630 Query: 500 LAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAIL 559 LA+ + + F + ++ E+ +A +IRHA+ E L YQP V + + + Sbjct: 631 LAMYQAKGAGRNTHRFFNPEMQAKVLEHAAMANDIRHALTRNEFTLYYQPQVTHDGQ-LT 689 Query: 560 GAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFL 619 GAEAL RW ++G ISP++FI IAE+ G I LG ++ A + Q + L D + Sbjct: 690 GAEALIRWQHPKQGTISPIEFIPIAEETGLILPLGEWVLDQAC-QVLAVWQNSPLTDSLV 748 Query: 620 LHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQG 679 L IN+S Q ++ F ++ ++ + L +E+TE+++ E + QL+K G Sbjct: 749 LAINISAKQFHQTGFVQQVLEALQRYRANPDRLKLELTESMLHEDLEDTITKMSQLKKYG 808 Query: 680 VRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPV 737 V S+DDFGTG S+L + D +K+D F D+ + I R I LA+ + V Sbjct: 809 VSFSLDDFGTGYSSLNYLKRLPLDQLKIDKSFVRDLLTNSHDADIARTIVSLAKSMNLAV 868 Query: 738 IAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 IAEGVE+++ L GC+ QGYL+ +P+P A+ Sbjct: 869 IAEGVETQEQRLALASYGCLDFQGYLFSRPVPLEAF 904 >UniRef50_C5T9I2 Diguanylate cyclase/phosphodiesterase (Fragment) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9I2_ACIDE Length = 632 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 126/442 (28%), Positives = 206/442 (46%), Gaps = 31/442 (7%) Query: 349 IKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE---------SNNNQYLAVGII 399 + S A +++AE N+L +L D +G A E SN LA+ I Sbjct: 191 VLRSRAAVRNAE----NRLHALAHTDAVTGTGNRHAFNERLAAEILRASNLGSRLALIYI 246 Query: 400 KLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR--ENVQTFT 457 L + + FG + ++R++ R+ I D + ++ R N +T T Sbjct: 247 DLDNFKTLNDTFGHAAGDGLLRQVAVRLRSAVRAGDSISRLGGDEFAVILRLDMNDETLT 306 Query: 458 RKIAMVND-FDSSFGYRNLRIHKSAICE------PLQGENAWSYAEKLKLAISSIRDHMF 510 R + D F S+ Y + S C P + S A+ ++ Sbjct: 307 RYGQRIVDIFQST--YTEVGQQVSVTCSAGIATFPDDASDRDSLVSNADTAMYRAKEMGK 364 Query: 511 SEFIFCDDAKLNEIEENIWIARNIRHAMEIGE-LFLVYQPIVDINTRAILGAEALCRWVS 569 + + D + + + +R +E G L L YQ + RA++GAEAL RW Sbjct: 365 NRCVRFDASMNQALARRQTVEHALRWELEHGSGLALHYQALYRATDRALVGAEALLRWTH 424 Query: 570 AERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQL 629 E G ISPL+ +++AED G I LGY +++TA + + + L+ + +N+S QL Sbjct: 425 PELGSISPLEVVSVAEDCGLIIPLGYWVLRTACRDAAQWQAQGPLR----VAVNISARQL 480 Query: 630 NEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGT 689 +P F ER I++E GL A+ L +E+TETV+ E + +L + G+ ++IDDFGT Sbjct: 481 GDPQFLERVMDILREEGLAAHQLEIELTETVLMENMEAGAHTLHRLSQLGIHLAIDDFGT 540 Query: 690 GLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDV 747 G S+L ++ +K+D F D+ + IV I LA + V AEGVE+ Sbjct: 541 GYSSLAYLRQLPMSRLKIDRSFVKDLPAQEHSRTIVTAIVALAHGLGLQVTAEGVETPQQ 600 Query: 748 ARELIKLGCVQAQGYLYQKPMP 769 A+ L++ GC QGY++ +P+P Sbjct: 601 AQYLVQQGCDVLQGYVFARPLP 622 >UniRef50_A5V028 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A5V028_ROSS1 Length = 892 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 88/234 (37%), Positives = 135/234 (57%), Gaps = 3/234 (1%) Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 ++R +E E F+VYQPIV+++T+ +G EAL RW +RGI++P +FI IAE+ G I Sbjct: 642 DLRRGIERNEFFVVYQPIVELSTQRTVGFEALLRWRHPQRGIVTPAEFIAIAEETGLIVP 701 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 +G +++ A + + QR + ++IN+SP Q+ +P R ++ E L A++L Sbjct: 702 IGQMVLREACRQLSAWKQRHPER-TLAMNINLSPRQIADPDLVHRTAALIDEYRLDADAL 760 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +EITET I + ++QLR GV+I IDDFGTG S+L + +IK+D F Sbjct: 761 RLEITETAIIEHGDAAGRVLQQLRALGVQICIDDFGTGYSSLSYLHRFPIATIKIDRSFV 820 Query: 713 GDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLY 764 I + +IVR I LAR + VIAEG E+E+ L + C QG+L+ Sbjct: 821 SQIHRSHENTEIVRSIISLARSLGMAVIAEGTETEEQLLRLRSMSCAYGQGWLF 874 >UniRef50_B4B5G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B5G1_9CHRO Length = 997 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 110/402 (27%), Positives = 192/402 (47%), Gaps = 18/402 (4%) Query: 386 IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLY 445 + + +Y A+ I L + + G D + ++ ++ +R+ + + + D + Sbjct: 598 VARSKGEYGAILFIDLDQFKTLNDARGHDAGDHLLIEVAKRLKQSVRKSDTVARLGGDEF 657 Query: 446 LLLCRE------NVQTFTRKIA--MVNDFDSSFGYRNLRIHKSA----ICEPLQGENAWS 493 ++L + +R++A + + F +++ SA P E Sbjct: 658 VVLLPQLHHEPTTAAHLSREVAEKVRQKLSTPFVFQHEEFIISASIGITIFPKANETVSD 717 Query: 494 YAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDI 553 ++ A+ +++ + F D L ++E + + +R A+E E L QP VDI Sbjct: 718 LLKEADTAMYQVKEKGRNGVCFFDTTMLVQVESRFTLEKELRRALERQEFRLYLQPQVDI 777 Query: 554 NTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRAS 613 N R I+GAE L RW G++ P FI +AED G I +G +++ A F + Sbjct: 778 NER-IVGAEVLLRWQHPSLGLVPPCAFIPLAEDTGLIISIGEWVLQQACFFLADFQAK-- 834 Query: 614 LKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIE 673 DF L +N+SP QL++ F I+ ++ANSL +EITE +I + ++ + Sbjct: 835 -NPDFHLSVNISPRQLSQAEFVSNLKQIINITAVQANSLTLEITERLIIQDVDYVSSVMS 893 Query: 674 QLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLAR 731 +L+ G+ +S+DDFGTG S+L + + IK+D F DI + ++ I +AR Sbjct: 894 KLQDLGINLSLDDFGTGYSSLAYLKRLPLNEIKIDKNFVQDIGNYSNHAPLIEAILAVAR 953 Query: 732 YNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 + + V+AEGVE+ + A L K GC QGYLY KP P + Sbjct: 954 HFNLTVVAEGVETIEQANFLKKRGCHFYQGYLYGKPQPLETF 995 >UniRef50_A0LUZ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Actinomycetales RepID=A0LUZ3_ACIC1 Length = 949 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 91/270 (33%), Positives = 142/270 (52%), Gaps = 12/270 (4%) Query: 518 DAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISP 577 DA L ++ ++RHA+ EL L YQP V++ T ++G EAL RW RG+I P Sbjct: 651 DALLARVQTET----DLRHALSRRELVLHYQPTVNLRTGQVVGVEALIRWYHPTRGLIQP 706 Query: 578 LKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHER 637 + FI +AE+ G + +G I+ + + + A F + +NVS QL+ P + Sbjct: 707 MDFIGMAEETGLVESIGAWAIRECCRQGARWQRYAQPGGVFHVAVNVSGRQLH-PRLPDI 765 Query: 638 FTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRF 697 T + E G+ +L +E+TE ++ + +E + QL+ GVR++IDDFGTG S+L Sbjct: 766 VRTALTETGMPPGALVIEVTENILVKRSEEAIAVLRQLKSFGVRVAIDDFGTGYSSLSYL 825 Query: 698 YEINPDSIKVDSQFTGDIF----GTAG-KIVRIIFDLARYNRIPVIAEGVESEDVARELI 752 D +K+D F I GT G ++VR I L R R+ +AEG+E+ + L+ Sbjct: 826 ARFPVDVLKIDKSFVEQITDRNSGTEGTELVRTILHLGRALRLGTVAEGIETREQYAALL 885 Query: 753 KLGCVQAQGYLYQKPMPFSAWDK--SGKLV 780 + C QGYL+ +P+P D G LV Sbjct: 886 AMSCDYGQGYLFSRPLPAEGIDTLFGGTLV 915 >UniRef50_B8DLW6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Desulfovibrio RepID=B8DLW6_DESVM Length = 739 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 95/294 (32%), Positives = 152/294 (51%), Gaps = 9/294 (3%) Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELF 544 P G + + + ++A+ ++ + F A +++ + I ++IR +E E Sbjct: 427 PEDGRDPATLLKNAEIAMYRAKEQGGARFRRFTQAMNDDVTRRLAIEKSIRKGLENDEFV 486 Query: 545 LVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGE 604 + YQP VDI T + G EAL RW + ++ PL+FI +AED G + LG ++++ A + Sbjct: 487 VFYQPRVDIVTGQVTGMEALVRWARPDGTLVPPLEFIPVAEDTGLVVALGERVLRDACIQ 546 Query: 605 FRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERI 664 R ++ + +N+S Q +P +R + E+GL + L +EITET + R Sbjct: 547 TRRWTDELG---PLRIAVNISARQF-QPDLLDRVQAALAESGLPPSQLELEITETTMMRD 602 Query: 665 NEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KI 722 +E+L QG+ I+IDDFGTG S+L D+IK+D F D+ G G I Sbjct: 603 LPTSVAILERLAAQGISIAIDDFGTGHSSLYYLKNFPIDTIKIDRSFVRDVPGDEGDATI 662 Query: 723 VRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP---FSAW 773 V I + R + V+AEGVE++D L GC + QGY Y KP+P F+ W Sbjct: 663 VSTIVTMGRNLSLNVVAEGVETDDQLGFLRAHGCREVQGYYYSKPLPADGFADW 716 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 121/391 (30%), Positives = 188/391 (48%), Gaps = 11/391 (2%) Query: 390 NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC 449 NN +AV I L + + G D + +++ + R+ + I D ++ L Sbjct: 538 NNFKVAVLFIDLDYFKNINDSLGHDIGDALLKLVAARLKTCLRRSDTIARLGGDEFVALL 597 Query: 450 RE---NVQTFTRKIAMVNDFDSSF--GYRNLRIHKS-AIC-EPLQGENAWSYAEKLKLAI 502 E + + M+ F G L I S IC P GE + LA+ Sbjct: 598 SELDSSEEVIFVAEKMIESLTEKFTLGEYQLSITPSIGICIYPDDGETSVELLRNADLAM 657 Query: 503 SSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAE 562 +D + F F + E + + +R A+ +L + YQP V + + + G E Sbjct: 658 YQAKDDGRNNFKFYSPDMNRKALERLKLETFLRVAIVQQQLSVYYQPKVSVLSGKMTGME 717 Query: 563 ALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHI 622 AL RW E G ISP FI IAE+ G INE+G +++ + + R + +A D + + Sbjct: 718 ALLRWQHPELGFISPAVFIPIAEETGLINEIGDWVLRQSCLQARLW--QAQGYDIVPIAV 775 Query: 623 NVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRI 682 N+S QL + +F R TI++E GL A+ L +EITE+++ E +EQLR GVR+ Sbjct: 776 NLSARQLKQDNFAARVVTILREAGLDAHYLVLEITESMLMSTGESGLQILEQLRDDGVRL 835 Query: 683 SIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAE 740 ++DDFGTG S+L R + DS+K+D F DI IV LA + V AE Sbjct: 836 ALDDFGTGYSSLSRLKNLPLDSLKIDQSFVRDIVTDPNDASIVSATAVLAHALNLKVTAE 895 Query: 741 GVESEDVARELIKLGCVQAQGYLYQKPMPFS 771 GVE+++ + L C + QGYL+ +P+P S Sbjct: 896 GVETQEQLDFIRMLNCEEYQGYLFSRPIPAS 926 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 89/253 (35%), Positives = 135/253 (53%), Gaps = 7/253 (2%) Query: 526 ENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAE 585 E + + + A+E+G+ + YQP +D+ + I G EAL RW ERG++ P +FI +AE Sbjct: 610 ERLLLQNQLHQALELGQFQVHYQPQMDLRSGRICGVEALVRWQHPERGLVPPAEFIPMAE 669 Query: 586 DIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKEN 645 D G I LG +++TA E R + R L +N+SP Q P ++ E+ Sbjct: 670 DTGLIEPLGEWVLRTAAREVRGWQDRGLPA--LNLSVNLSPRQFRHPDLPGMVERVLAES 727 Query: 646 GLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSI 705 GL+A L +EITE +I EH + ++ + GVR+SIDDFGTG S+L + ++ Sbjct: 728 GLEAERLELEITERLIIVDLEHTVDTLSRIARLGVRVSIDDFGTGHSSLAYLKRLPVHAL 787 Query: 706 KVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYL 763 K+D +F I + I + L R R+ VIAEGVE+ + A L + GC QG+ Sbjct: 788 KIDREFVDGIGQDSDDAAIAEAVIALGRTLRLQVIAEGVETREQASFLREHGCDAVQGFF 847 Query: 764 YQKPMP---FSAW 773 +PMP + W Sbjct: 848 IARPMPAGELTGW 860 >UniRef50_B1XX17 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XX17_LEPCP Length = 790 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 84/246 (34%), Positives = 139/246 (56%), Gaps = 4/246 (1%) Query: 526 ENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAE 585 E + + ++R A+E GEL L YQP VD+ T ++GAEAL RW AERG++ P +FI +AE Sbjct: 511 ERVLLEGDLRRAIERGELELHYQPKVDMRTDRVVGAEALLRWHHAERGMVPPDRFIPVAE 570 Query: 586 DIGFINELGYQIIKTAMGEFRHF--SQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMK 643 D G I +G +++TA H+ ++RA ++ + +N+SP Q PHF +M Sbjct: 571 DTGLIIPIGEWVLRTACTAATHWNRTRRARGQEALKIAVNLSPRQFWSPHFVAMVRAVMH 630 Query: 644 ENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPD 703 E G + + +EITE+++ + +L + G ++IDDFGTG S L Sbjct: 631 ETGCRPEWIELEITESLLIDTRGQVSEILAELSRLGFTLAIDDFGTGYSALGYLTRFPIS 690 Query: 704 SIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQG 761 ++K+D F ++ + +VR I + ++ ++AEGVE+ + + L ++GC AQG Sbjct: 691 TLKIDRSFVNEVATHPARASLVRAIVAMGHSLQLELVAEGVETHEQVQVLREMGCQLAQG 750 Query: 762 YLYQKP 767 +LY +P Sbjct: 751 WLYGRP 756 >UniRef50_A1WTZ5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Halorhodospira halophila SL1 RepID=A1WTZ5_HALHL Length = 677 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 110/401 (27%), Positives = 187/401 (46%), Gaps = 16/401 (3%) Query: 380 IKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVT 439 I+ ++ + +LAV + + A+ G D ++I+ + +++ E Q I Sbjct: 281 IEQAHALQEGSADWLAVIVCDIKEFSAINESLGQDLGDEILAAVGRKLRELLPQAATIGR 340 Query: 440 FNADLYLLLCR-----ENVQTFTRKIAMVNDFDSSFGYRNLRIH---KSAICEPLQ-GEN 490 D + +L + + +I V+ + + IH ++ I GE+ Sbjct: 341 MGGDQFGVLLPWLADAQEAMGYAERI--VDKVGNPLALSDRSIHLSLRAGISVTRHSGES 398 Query: 491 AWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPI 550 A E+ A + S F + E +++ +R A++ G L + YQP Sbjct: 399 AGVLVEQADAARQQSK-RTASRCQFFSRELTEQAREQVYLTTELRRALDSGGLAVHYQPQ 457 Query: 551 VDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQ 610 VD+ + LG EAL RW + G ISP +FI AE G I+ +G Q+++ A +FR + Sbjct: 458 VDLRSGEWLGYEALVRWHHPKDGWISPGRFIPAAERAGMIHHVGEQVLEQAGRQFRQWRD 517 Query: 611 RASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYL 670 + L +N++ Q+ P + E+ + GL L +EITE ++ Sbjct: 518 EGVAPE--WLAVNIAAPQMETPGWGEQLLAFLNRFGLAPEDLELEITERLLVERRTEVAT 575 Query: 671 NIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFD 728 + LR+ GVR+++DDFGTG S+L E+ D IK+D F D+ K +V I Sbjct: 576 ELAYLRRHGVRVAVDDFGTGYSSLNYLTELPVDRIKIDRAFIADLTEDPRKVAVVEAIVT 635 Query: 729 LARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 L + I V+AEGVE+E + L+ +GC Q QG+L+ +P P Sbjct: 636 LGQRLGIAVLAEGVETEAQRQVLLDVGCRQGQGFLFARPAP 676 >UniRef50_A1VBK7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=Desulfovibrio vulgaris RepID=A1VBK7_DESVV Length = 1413 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 90/237 (37%), Positives = 125/237 (52%), Gaps = 4/237 (1%) Query: 537 AMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQ 596 A+ G+ L YQP+ D +RA+LG EAL RW RG+I P FI +AE+ G I LG+ Sbjct: 1152 ALRWGQFELDYQPVFDTRSRALLGFEALVRWRHPLRGLIPPTAFIPVAEETGIITRLGHW 1211 Query: 597 IIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEI 656 +++TA+ + + DD + +N+S Q +P +++ GL A+ L VEI Sbjct: 1212 VLETALTALARWRLQIPGIDDLYVAVNMSALQFAQPTLPGSVRDALQKTGLPASCLKVEI 1271 Query: 657 TETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF 716 TET I + I LR GV I IDDFGTG S+L D++KVD F Sbjct: 1272 TETAIMQDPTTALQRISALRDLGVGIGIDDFGTGYSSLAYLQRFPVDTLKVDRSFVSQST 1331 Query: 717 GTAG----KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 G +IVR + LA + V+AEGVE+E+ L LGC QGYL +P+P Sbjct: 1332 TPEGEGNREIVRAVVVLAHSLSLAVVAEGVETEEQFAFLAGLGCDAVQGYLLSRPVP 1388 >UniRef50_A0XYD8 GGDEF/EAL domain protein n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0XYD8_9GAMM Length = 640 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 137/519 (26%), Positives = 235/519 (45%), Gaps = 36/519 (6%) Query: 276 GGNLLN--ASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQI 333 GG N ++ KL +AFI++ + L+ + + N L FL I Sbjct: 125 GGGSANVLSAHKLTCFAYAFILLFPYALVLIMSEDYYE---------NVLGFLGIGYGSI 175 Query: 334 EALKIREGDA--KEIISIKNS---IAEMKDAEIE-RSNKLLSLISYDQESGFIKNMAIIE 387 L + + A ++ I +KN + E + ++ R+ +++ L + D + + A + Sbjct: 176 NLLTLNKASAFTQQAIHLKNQNSDLLERMELRVDARTKEIMHLSNSDSLTQLLNRNAFLN 235 Query: 388 SNNNQY-------LAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTF 440 + A+ I L G + + V G + ++R+ +RI++ A + Sbjct: 236 DAKKRIKHYPDPPFALFFIDLDGFKNINDVMGHKVGDNVLRRTAKRISDVCAHNQQKCRW 295 Query: 441 NADLYLLL----CRENVQTFTRKI--AMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSY 494 D +L+L C+EN F ++I A+ D + + P G + + Sbjct: 296 GGDEFLILSDFVCKENTYDFAKEIIDAITQDHPETEHGARVGATIGIALYPEHGRDLDAL 355 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 +A+ + + F ++ +E+E ++ + A+ LVYQPI+D Sbjct: 356 ILNADMAMYHQKRMNRGQISFFSESLRSELERKRLLSEELLTALINNCFSLVYQPIIDSK 415 Query: 555 TRAILGAEALCRW-VSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRAS 613 T I EAL RW + E I P +FI IAE G I+++G+ +++TA + F + Sbjct: 416 THDIYAIEALIRWQLKGEN--IPPDEFIPIAEQYGLISKIGFWVLETACQQALTFQK--- 470 Query: 614 LKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIE 673 L D + INVS QL E F + +I+ + A+ L +E+TE+V F ++ Sbjct: 471 LTPDLSVSINVSVMQLKEIEFASKVKSILADLNFPAHKLHLEVTESVFANDKHTFLYVVK 530 Query: 674 QLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYN 733 L++ GVRISIDDFGTG S+L ++ D +KVD F D IV + +A Sbjct: 531 SLQELGVRISIDDFGTGYSSLSSMLDVGVDIVKVDKSFVQDEDERGLSIVNAVVQMASSL 590 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 VIAEGVE+ ++L +LG QGY + +P+ SA Sbjct: 591 NFNVIAEGVETPLQCKKLTQLGVTHLQGYYFSRPLTSSA 629 >UniRef50_B1J7P7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=B1J7P7_PSEPW Length = 699 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 103/311 (33%), Positives = 153/311 (49%), Gaps = 28/311 (9%) Query: 481 AICEPLQGE-NAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEEN------------ 527 AIC P Q E + ++ + +AI+ + + + D L E + N Sbjct: 382 AICPPFQIEGHQFTVGVSIGIAIAPDDNEQAEQLLGYADMALYEAKRNGRNRYECFHVEL 441 Query: 528 -------IWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKF 580 + ++R A+ +G+L L YQPIVD T ++ G EAL RW RG++ P+ F Sbjct: 442 DVAARQRRLVETDLRTALHLGQLHLHYQPIVDQQTSSVTGYEALLRWEHPTRGMVMPMDF 501 Query: 581 ITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTT 640 I IAE+ G I+ELG + + A E AS + + +N+SP Q + Sbjct: 502 IPIAEETGLIHELGTRALNLACQEA------ASWDSEQTVSVNLSPVQFKNANLVHTVAL 555 Query: 641 IMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEI 700 + ++GL L +EITE+V+ +E + L+ GV IS+DDFGTG S+L Sbjct: 556 ALADSGLAPQRLELEITESVLLGNSEENVRTLRALKDLGVSISLDDFGTGYSSLGYLRSF 615 Query: 701 NPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQ 758 D IK+D F D+ + A IVR I +L+ I AEGVESE+ + L GC Sbjct: 616 PFDRIKIDKSFVHDMCDSREAMSIVRAITELSNSLMIKTTAEGVESEEQMQRLAAEGCSH 675 Query: 759 AQGYLYQKPMP 769 QGYLY +P+P Sbjct: 676 FQGYLYGRPVP 686 >UniRef50_Q2BPB1 Regulatory component of sensory transduction system n=2 Tax=Gammaproteobacteria RepID=Q2BPB1_9GAMM Length = 885 Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 127/449 (28%), Positives = 212/449 (47%), Gaps = 26/449 (5%) Query: 340 EGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGF---------IKNMAIIESNN 390 EG+ + +++K + + K E K+L +D + ++ M N Sbjct: 430 EGEVRHFLAVKQDVTKQKAQE----EKILHQAHFDGLTELPNRFLAMHRLETMMHEAKRN 485 Query: 391 NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL-- 448 +AV + + + V G D +KI+ + +R+ I D +++L Sbjct: 486 QHQIAVLFLDMDDFKKVNDTLGHDMGDKILVEAAKRLQGSVRDSDTIGRLGGDEFIVLIN 545 Query: 449 -CRENVQTFTRKIAMVNDFDSSFGY--RNLRIHKSAICEPLQGENAWSYAEKLKLAISSI 505 Q ++ F SS R++ + S I L + + +E L+ A S++ Sbjct: 546 HLERPEQALPIAQNLLQQFRSSLTIDGRDILLTMS-IGIALYPGDGTTPSELLRNADSAM 604 Query: 506 ---RDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAE 562 + + F F E + + + +A++ EL L+YQP+VD+ TR I+GAE Sbjct: 605 YHSKAAGRNSFHFYTQEMNIEANRRLQLEEQLHNALDRNELRLLYQPVVDLKTRKIVGAE 664 Query: 563 ALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHI 622 AL RW S E G ISP +FI +AE G I E+G ++ A+ + + + DF + I Sbjct: 665 ALLRWDSKELGAISPEEFIPVAEHTGLIVEIGKFVLDDALRTTSRWIK--TFIPDFHIAI 722 Query: 623 NVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRI 682 N+SP Q +PH + + + GL+ +L +EITE V+ + I +L ++G+ I Sbjct: 723 NLSPRQFRDPHLIDNIESFVNSYGLEGRNLELEITEGVLMSQHADVEEAIAKLTQKGISI 782 Query: 683 SIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAE 740 S+DDFGTG S+L + +KVD F DI A ++V D+A + VIAE Sbjct: 783 SMDDFGTGYSSLSYLRSYPFNILKVDRSFINDISVDAADLELVNASIDMAHGLGLKVIAE 842 Query: 741 GVESEDVARELIKLGCVQAQGYLYQKPMP 769 GVE+E+ L++ C AQGY + KP+P Sbjct: 843 GVETEEQTALLLRKNCDMAQGYYFSKPIP 871 >UniRef50_B0CC56 Diguanylate cyclase/phosphodiesterase with GAF domain n=2 Tax=Acaryochloris marina MBIC11017 RepID=B0CC56_ACAM1 Length = 787 Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 88/273 (32%), Positives = 150/273 (54%), Gaps = 7/273 (2%) Query: 501 AISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHA---MEIGE--LFLVYQPIVDINT 555 A+ + H ++ D+ ++ +W+ ++R+A +E G+ L YQPI + Sbjct: 493 AMYRAKAHGRGGYVVFDETMHKQVRSRLWLGNSLRYAVKAIEQGQNPFLLQYQPIFCLRQ 552 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 + ++G EAL RW ++G+ISP KFI +AE+ G I LG ++K A + + Q S+ Sbjct: 553 QRLIGFEALLRWHHPQQGLISPEKFIPVAEETGLIIPLGQWVLKAACQQLAVWEQEFSVP 612 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 + INVS Q +P+F + ++M+ + L + L +EITETV+ + +EQL Sbjct: 613 --LTMSINVSSQQFLQPNFVQSVESLMQSHQLAGHHLKLEITETVLMESTHYVTDRLEQL 670 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRI 735 + G+ +S+DDFGTG S+L Y + +++K+D F I +IV+ I LA + Sbjct: 671 QNLGISLSLDDFGTGYSSLNYLYNLPINTLKIDRSFVWGIGQGQDQIVKTIIALAHGLEM 730 Query: 736 PVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 V+AEG+E+ + + L LGC QGY + +P+ Sbjct: 731 NVVAEGIETIEQMQYLHTLGCELGQGYWFARPL 763 >UniRef50_A6FHU8 GGDEF family protein n=1 Tax=Moritella sp. PE36 RepID=A6FHU8_9GAMM Length = 628 Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 113/415 (27%), Positives = 218/415 (52%), Gaps = 22/415 (5%) Query: 373 YDQESGFIKNMAIIES--------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLC 424 YD +G ++++ +++ LAV + + +++ +G +K++ ++ Sbjct: 204 YDGLTGIANQLSLVSQMDDMLESVDDDNELAVIYLGIRNFKSINNSYGYAIGDKVLLEVS 263 Query: 425 QRIAEKYAQCCDIVTFNADLYLLLCR-ENV--QTFTRKIAMVNDFDSSFGYRNLRIHKSA 481 QRI ++ + D + ++ R ENV Q + + F+S+F + I + Sbjct: 264 QRIHQQLTTEYLVARCWGDAFAIVVRDENVVEQVIDLISRLSHAFESTFIIDDYTI-TTQ 322 Query: 482 ICEPLQ-----GENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRH 536 +C + + + EK + A+++ +D + F ++ I E ++ ++ Sbjct: 323 VCFGIALADSAEDQGIALVEKAEAAMTASKDKGCNYNFFTEELS-AVIGERHYLESHLAD 381 Query: 537 AMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQ 596 A++ E+ + YQPI+ + T+ +LGAEAL RW + G ++P +FI +AE G I LG Sbjct: 382 ALDKHEMSVHYQPIICVKTQRVLGAEALIRWNNPILGAVAPDRFINLAEQNGQILALGNF 441 Query: 597 IIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEI 656 +++TAM + RH+ R S +DF + +N+SP QL + + R ++ L ++L +EI Sbjct: 442 VLRTAMEQARHW--RKSFGNDFSIAVNISPVQLRDDNLVSRIAQLLAYYQLPGSALELEI 499 Query: 657 TETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF 716 TE V+ + + +++ L+K GV IS+DDFGTG S+L + + D++K+D F ++ Sbjct: 500 TEGVLLQDEKKVAKSLDGLQKLGVSISLDDFGTGYSSLSYLQKYSFDTLKIDRSFIMNLM 559 Query: 717 --GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 ++ R I +A+ + V+AEGVE+ + + +++ GC QGYLY KP+P Sbjct: 560 ECDQDKELARAIIAMAKKLNLQVVAEGVETPEQHQFIVEEGCDFGQGYLYGKPVP 614 >UniRef50_A4W933 Diguanylate cyclase/phosphodiesterase n=3 Tax=Enterobacteriaceae RepID=A4W933_ENT38 Length = 642 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 91/252 (36%), Positives = 140/252 (55%), Gaps = 8/252 (3%) Query: 521 LNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKF 580 L++++E+ + ++ A+ E + YQPIVD T+ I EAL RW+ +GI+SP F Sbjct: 389 LDKLQESRTLEHDMALALANKEFVVYYQPIVDSFTQEIYSYEALIRWIHPLKGILSPDTF 448 Query: 581 ITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTT 640 I +AE G INE+G +++ A E + A + +NVSP QL+ F + Sbjct: 449 IPVAEKTGMINEMGKSMLEMACREAVSWVIPAKIS------VNVSPVQLSSKAFAGIVVS 502 Query: 641 IMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEI 700 I+ E GL A L +E+TE+ + ++ + +LR GV+ISIDDFGTG S+L R + Sbjct: 503 ILNETGLSAERLELEVTESSLFTESKTPMNTLNRLRTLGVKISIDDFGTGYSSLSRLSRL 562 Query: 701 NPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQ 758 D IK+D F + A I+R+I +A+ + +AEGVE+++ L LGC Sbjct: 563 AFDKIKIDKSFVNSVSTQEDALNIIRLITGMAKSLNMKTVAEGVETQEQLESLQALGCDF 622 Query: 759 AQGYLYQKPMPF 770 QGYL+ KP P+ Sbjct: 623 IQGYLFGKPQPY 634 >UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF sensor n=3 Tax=Cyanobacteria RepID=B7KHV9_CYAP7 Length = 1262 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 88/238 (36%), Positives = 136/238 (57%), Gaps = 4/238 (1%) Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 ++R A+E E L YQP +D+NTR ++G EAL RW G++SP FI +AE+ G I Sbjct: 595 DLRKAIERNEFVLHYQPQIDLNTRKLIGVEALIRWQHPSLGMVSPALFIPLAEETGLICP 654 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 LG +++TA ++R + Q+A + +N+S +QL + R I+KE G+ + L Sbjct: 655 LGEWVLRTACHQYRIW-QKAGFPK-IQMAVNLSAFQLQQDDIVARIAMILKETGMTPSDL 712 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +EITET + E +EQL++ G++I+IDDFGTG S+L + D++K+D F Sbjct: 713 ELEITETTVMENLEQMTAILEQLKQMGIKIAIDDFGTGYSSLNVLKHLPVDTLKIDKSFV 772 Query: 713 GDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 DI K+ + I L + + V+AEGVE+ L L C +AQGYL +P+ Sbjct: 773 QDITLDSNDAKLCQGIIMLGKAFELDVLAEGVETFTQLEFLRSLNCDRAQGYLISRPL 830 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 112/392 (28%), Positives = 191/392 (48%), Gaps = 18/392 (4%) Query: 391 NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR 450 N+++AV ++ L + + G + ++R + +R+ + C + + D ++LL Sbjct: 657 NKFVAVLLLDLDNFKHINDTLGHATGDLLIRSVAERLRTECRTCDTLARWGGDEFVLLLT 716 Query: 451 -----ENVQTFTRKIAMVNDFDSSFGYRNLRIHKSA----ICEPLQGENAWSYAEKLKLA 501 +N + T K M + F I+ +A P G++ + ++ A Sbjct: 717 DLDDIQNTTSATEKF-MALLTERPFATSECDINTTASIGIALYPQDGQDPETLLKRADTA 775 Query: 502 ISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGA 561 + + + + + F + E + N+R A++ GE+ LVYQP +D+ I G Sbjct: 776 MYEAKKNGRNGYHFFSLQLAEQAERRHRMEINLRSALKEGEMQLVYQPQIDLGKVRITGM 835 Query: 562 EALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTA--MGEFRHFSQRASLKDDFL 619 EAL RW S E G ISP +FI +AE+ G I LG +++ A G ++ + L Sbjct: 836 EALLRWQSPEEGTISPARFIPLAEETGLIYPLGEWVLQQACRQGAIWQKTEASPL----C 891 Query: 620 LHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQG 679 + +N+S Q ++P + I++E GL + L +EITE+V E + +L+K G Sbjct: 892 VAVNLSAKQFHQPDLAKNIKKILRETGLSPHLLELEITESVFLENMEAAIEALTELKKLG 951 Query: 680 VRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPV 737 V+ SIDDFGTG S+L ++ D IK+ +F DI G I++ +A+ + + Sbjct: 952 VQFSIDDFGTGYSSLSYLKKLPIDRIKIAQEFVRDIDTDDGDKAIIKATIAMAKSLGMKL 1011 Query: 738 IAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 IAEGVE+ L+ GC QGY + KPMP Sbjct: 1012 IAEGVENHQQLAFLLLHGCHAMQGYYFAKPMP 1043 >UniRef50_Q2B961 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B961_9BACI Length = 974 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 117/447 (26%), Positives = 209/447 (46%), Gaps = 24/447 (5%) Query: 340 EGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE---------SNN 390 EG+ I I +I E K E E + L YD+++G + +E Sbjct: 516 EGEPAGIYCIGRNITEQKRIEQE----MTQLAYYDKDTGLPNRLKFMEELDDLLQKAKKK 571 Query: 391 NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLY-LLLC 449 + LAV + + + + G ++I+R++ RI F+ D + L+L Sbjct: 572 KRPLAVLFMDIDRFKLINDSLGHYAGDQILRQIAGRIEAILPPGSFFGRFSGDKFTLILA 631 Query: 450 RE----NVQTFTRKIAMVNDFDSSFGYRNLRIHKS--AICEPLQGENAWSYAEKLKLAIS 503 +E V + I +G + I S A P G + + +A++ Sbjct: 632 KEADSSRVTKLSNHILQAISSPVYYGEQEFFITGSIGASLYPGDGHEKETLMKNADIAMN 691 Query: 504 SIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEA 563 + + + + + + +R A++ E FL YQP+ ++ T AI G+EA Sbjct: 692 RSKHQGGNRLTYYSTEMNEQTLLKLELESYLRKALQKKEFFLCYQPLTNLETGAIYGSEA 751 Query: 564 LCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHIN 623 L RW + G++SP FI +AE+ G INE+G+ +++TA + + + + + +N Sbjct: 752 LIRWNHPKLGLVSPGDFIPLAEETGLINEIGHWVLQTACRQTKEWHNKGL--GSLTVSVN 809 Query: 624 VSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRIS 683 VS Q +P F + ++KE L+ L +E+TE+ + R E+ L I++L++ G+R++ Sbjct: 810 VSVHQFQQPGFVHKVLQVLKETMLEPQFLVLELTESSMLRNMENSILVIQELQRNGIRVA 869 Query: 684 IDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEG 741 IDDFGTG S+L + D++K+D F ++ + IV I + + V+AEG Sbjct: 870 IDDFGTGYSSLSYLKHLPIDALKIDRSFIDNLRSGSPDIAIVNAIITMGLGLHVKVVAEG 929 Query: 742 VESEDVARELIKLGCVQAQGYLYQKPM 768 VE+ + R L L C AQG+ +P+ Sbjct: 930 VETAEQMRLLKDLKCHFAQGFFIHRPL 956 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 120/468 (25%), Positives = 221/468 (47%), Gaps = 30/468 (6%) Query: 335 ALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNNQYL 394 A ++ GD + + + + I + + + E LL ++D +G + N +++E NQ + Sbjct: 405 ATQVPHGDDQALCLMFHDITDRRRFQEE----LLHQATHDTLTG-LPNRSLLEDRLNQAV 459 Query: 395 AVG----------IIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 A + L + V G ++++R + RI C D Sbjct: 460 AGARRRGQMVALLMFDLDNFKVVNDTLGHTAGDQLLRSVAARIRSFVRNCDTFARLGGDE 519 Query: 445 YLLLCRENVQTFTRKIAMVNDFDSSF------GYRNLRIHKSAICE--PLQGENAWSYAE 496 ++++ N+ + + F + G R + I S P G+ + + Sbjct: 520 FVIVL-TNLTRMDDAVTVAESFRNLLAMPFFLGGREIFITASMGISLFPDDGDTMEALIK 578 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 K A+ I++ + F F + ++ + I +R A+E GE+ L YQP ++ T Sbjct: 579 KADTAMYHIKESGRNSFQFFAEEMNQKVNARLTIETGLRRALEKGEMLLHYQPRLEPGTG 638 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 A++G EAL RW S + G+ISP FI IAED G I E+G ++ TA + + + D Sbjct: 639 AVVGMEALVRWNSPDMGLISPADFIPIAEDSGLIVEIGDWVLATACCQALEWHRMG--HD 696 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +N+S Q F +R I++++GL + + +E+TET + + + +LR Sbjct: 697 SLRVSVNISARQFVGHDFVDRVVRIIEQSGLSPHFVELELTETALTHNVDETVKIMNRLR 756 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNR 734 ++G+ ISIDDFGTG S+L D +K+D F D+ IV I +A + Sbjct: 757 ERGITISIDDFGTGYSSLNYLKRFPVDVLKIDKSFIDDMVKRREDAAIVATIIGIAHHMH 816 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK--SGKLV 780 + V+AEGVE+ + + L++ C + QG+ + +P+P +++ +G+ V Sbjct: 817 MKVVAEGVETAEQMKLLMEGNCEEIQGFYFSRPLPPEEFERYIAGRTV 864 >UniRef50_Q07PV4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07PV4_RHOP5 Length = 928 Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 89/241 (36%), Positives = 129/241 (53%), Gaps = 8/241 (3%) Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 ++R A+ G + YQP + + + G EAL RW RG+ISP +FI +AE+ G IN+ Sbjct: 677 DLRQAIADGGFEIYYQPQLRLCDDKVTGCEALLRWRHPVRGMISPAEFIPVAEETGLINQ 736 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 LG ++ + E + D + +NVSP Q F + + +GL A+ L Sbjct: 737 LGEWVLVESCAEAVKW------PGDVKVSVNVSPVQFGSEGFALKVAAALANSGLPAHRL 790 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +EITE V+ R +E + Q+R GV I++DDFGTG S+L D IK+D F Sbjct: 791 ELEITEAVLIRDDEAALTMLHQIRALGVGIALDDFGTGYSSLSYLRRFPFDKIKIDRSFI 850 Query: 713 GDIFGTAGK--IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPF 770 +I G IV+ + D+A R+ AEGVE+E EL +LGC + QGYLY P+P Sbjct: 851 KNIEDANGSAHIVKAVVDIAAAQRMTTTAEGVETEGQLNELRRLGCSEMQGYLYSPPVPA 910 Query: 771 S 771 S Sbjct: 911 S 911 >UniRef50_C5SBB5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SBB5_CHRVI Length = 745 Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 112/416 (26%), Positives = 198/416 (47%), Gaps = 15/416 (3%) Query: 365 NKLLSLISYDQESGFIKNMAII----ESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIV 420 N+L L YDQ SG I E + +A+ ++ L + ++++ Sbjct: 317 NRLFRLAYYDQLSGLPNRNRFIQLVEEKGRDPDMALALLDLDDFADIATTLDHHFGDEVL 376 Query: 421 RKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKS 480 R + +R+ + + + D + LL + T R I V F R+ I S Sbjct: 377 RAVAERLEQTFGSQVMLARVAGDTFGLLGPRDAVTPER-IQQV--FSEPLTVRDETIRLS 433 Query: 481 AICE--PLQGENA--WSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRH 536 A L G+ A + +A+ + + + +A E + + ++R Sbjct: 434 ATSSLITLNGQPAKDRDLLKDAGIALKQGKRLGRGKANYFSEALGRAARERMQLLSSLRA 493 Query: 537 AMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQ 596 A +L LV+QP +++ + ++GAEAL RW + P +FI +AE G I LG Sbjct: 494 AFSAEQLSLVFQPQIELASGPVIGAEALLRWEIEPGRWVPPDQFIPLAEQSGLIVPLGEW 553 Query: 597 IIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEI 656 +++TA + ++R F + +NVS Q EP F ++ ++ + A+ + +E+ Sbjct: 554 VLRTACRQLHRLTERG--HTGFRMAVNVSHAQFREPGFVSMLECVLADSRVAASQIELEL 611 Query: 657 TETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF 716 TE+V + + +R++GV I+IDDFGTG S+L ++N D +K+D F ++ Sbjct: 612 TESVAMDHIDDINTKLADIRRRGVTIAIDDFGTGYSSLSVLRQLNIDRLKIDRSFVKELD 671 Query: 717 GTAGK--IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPF 770 GT K I ++I L + +IAEGVE+ R L+ +GC++AQG+L+ +PMP Sbjct: 672 GTHTKAGIAQLIIALGHQCNLALIAEGVENAVQRRSLLAMGCLEAQGFLFARPMPI 727 >UniRef50_A6T018 Signal transduction protein n=4 Tax=cellular organisms RepID=A6T018_JANMA Length = 745 Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 92/252 (36%), Positives = 135/252 (53%), Gaps = 4/252 (1%) Query: 523 EIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFIT 582 +I E + + +R A E L +VYQP +D+ TR +GAEAL RW + + +ISP +FI Sbjct: 487 DIRERVNMMHALRTAFEERRLTVVYQPQIDMVTRQPVGAEALLRWTTEDGSMISPNRFIP 546 Query: 583 IAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIM 642 IAE G I ELG +++ A E DF++ +NVS Q PHF + Sbjct: 547 IAEYSGLIIELGEWVLRQACQELVRIQSLGFA--DFMVSVNVSQVQFRHPHFLSMLRKAL 604 Query: 643 KENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINP 702 + A+ + +EITE++ + ++Q+ GV I+IDDFGTG S+L +++ Sbjct: 605 HDTNAPAHCVELEITESMAMEEPDALIKLLDQITATGVSIAIDDFGTGFSSLSHLQKLSV 664 Query: 703 DSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQ 760 D +K+D F +I ++ I +I L R + VIAEGVE E A L +LGC Q Sbjct: 665 DRLKIDRAFVTEITDSSRGSSIAEMIIQLGRNLELDVIAEGVEDERQAAILTELGCPLGQ 724 Query: 761 GYLYQKPMPFSA 772 GYL+ KPM A Sbjct: 725 GYLFAKPMSAEA 736 >UniRef50_Q3AAV9 Sensory box/GGDEF domain/EAL domain protein n=6 Tax=Clostridia RepID=Q3AAV9_CARHZ Length = 769 Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 113/388 (29%), Positives = 193/388 (49%), Gaps = 10/388 (2%) Query: 390 NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC 449 N + LAV + L + + G +++++K+ + + + + I D +++L Sbjct: 361 NGKKLAVFFVDLDNFKIINDSLGHHTGDRLLKKIAKELTKCVRETDTISRVGGDEFIILL 420 Query: 450 RE-NVQTFTRKIA--MVNDFDSSFGYRN----LRIHKSAICEPLQGENAWSYAEKLKLAI 502 + N T K+A ++ FD N + I P G++ + + +A+ Sbjct: 421 PDVNSIEDTDKVAKRILELFDQPIKLNNYELPVTISIGIAIYPDHGKSERAILKNADIAM 480 Query: 503 SSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAE 562 + + + F + D A +E+E + R++R A+E + L YQP++D+ T I E Sbjct: 481 YTAKRKGKNGFQYFDIAMKSEVEFANTVKRDLRLALEKNQFILYYQPLIDLKTGKIASME 540 Query: 563 ALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHI 622 AL RW ++G+ISP FI IAE+ I +G +++TA + + + F + + Sbjct: 541 ALLRWQHPKKGMISPFHFIPIAEETRQIISIGEWVLRTACRQMKEWLGMGY--SGFSVSV 598 Query: 623 NVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRI 682 NVS QL +P+F + I+KE L+ L +EITETV+ E N+ L+K GV+I Sbjct: 599 NVSVHQLEQPNFAKVVCDILKEIELEPRYLELEITETVLIEAVETVVENLYHLKKAGVKI 658 Query: 683 SIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK-IVRIIFDLARYNRIPVIAEG 741 IDDFGT S+ + + D +K+D F I K I+ I L ++PV AEG Sbjct: 659 IIDDFGTENSSFRYMQKFTVDGLKIDRSFVNGIKIDVNKAIIDAIILLGHRLKLPVTAEG 718 Query: 742 VESEDVARELIKLGCVQAQGYLYQKPMP 769 VE+ + LI+ GC + QG+ + KP+P Sbjct: 719 VETREQLECLIESGCDKVQGFYFSKPLP 746 >UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5Q6_AZOSB Length = 828 Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 124/465 (26%), Positives = 214/465 (46%), Gaps = 33/465 (7%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII------ 386 I ++ EG+ +++ + I+++KDA+ ++L L YD +G + N A++ Sbjct: 348 IGTVRDDEGEVSNYVAVFSDISQIKDAQ----SQLERLAHYDPLTG-LPNRALLGDRLAH 402 Query: 387 ----ESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 +AV + L G + V G +++++ + +R+ + F Sbjct: 403 AISRARRAGTSVAVLFLDLDGFKNVNDSLGHPAGDRLLQIIAERLCGALRSEGSVSRFGG 462 Query: 443 DLYLLLCRENVQT---------FTRKIAMVNDFDSSFGYRNLRIHKSAICEPLQGENAWS 493 D + ++ + V+ +IA D D + + I + P G++A + Sbjct: 463 DEFAVVLEDVVRGEAVSEVAEHLIAEIARPLDLDGHGAHVSASIGIALF--PRDGDDATT 520 Query: 494 YAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDI 553 + A+ + + F F + + + +R A+E G L YQP +D+ Sbjct: 521 LIKAADTAMYRSKALGRNTFSFHHEDMAQAAHRRLSLEHGLRQALEQGRFELWYQPQIDL 580 Query: 554 NTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRAS 613 T + GAEAL RW ERG++SP +F+ +AE+ G I +G +++ A R + Sbjct: 581 RTGVLAGAEALLRWRDPERGLVSPAEFVPLAEETGLILPIGLWVLEEACRAGRAWLDVGL 640 Query: 614 LKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIE 673 + +NV+ Q+ F + ++ +GL +L VEITE + R E+ L + Sbjct: 641 APGR--IAVNVAAPQIERGGFDQAVARVLSASGLPPAALEVEITEGSLLRSAENARLAVA 698 Query: 674 QLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLAR 731 LR GV ++IDDFGTG S+L + ++K+D +F D+ AG I R I + R Sbjct: 699 ALRALGVGVAIDDFGTGYSSLAYLKNLAVQTLKIDREFVRDLPHDAGNLAITRAIIAMCR 758 Query: 732 YNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP---FSAW 773 V+AEGVE A L+ GC AQGYL+ KPMP F+ W Sbjct: 759 SLGFGVVAEGVEEPAQAAFLVSEGCTLAQGYLFAKPMPGAEFAEW 803 >UniRef50_A6CPZ0 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CPZ0_9BACI Length = 975 Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 118/471 (25%), Positives = 225/471 (47%), Gaps = 36/471 (7%) Query: 325 FLPDSTDQIEALKIR------EGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESG 378 ++P + +++ I+ +G + I +I E K E K+ L +D E+G Sbjct: 494 WIPSKSGEVQLFHIKNIPITVDGHCVGLFGIGRNITEQKKTE----EKITYLAYFDAETG 549 Query: 379 FIKNMAIIE---------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAE 429 + E + + V + + + + G ++I+ +L +RI Sbjct: 550 LPNRIKFRELAEEFISRAKKKKRRIGVLFLDIDRFKLINDTLGHSAGDQILIELAERIKN 609 Query: 430 KYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSS-------FGYRNLRIHKSAI 482 + + F +D + +L +NV K+ V + + G + I K++I Sbjct: 610 ALPKGAYLGRFGSDKFTILISKNVTN--EKLKQVAELIAENIQMPIIQGNQEFYI-KASI 666 Query: 483 CEPLQGENAWSYAEKLKLAISSI---RDHMFSEFIFCDDAKLNEIEENIWIARNIRHAME 539 + ++ A+ LK A +++ + + + +F + E + + +R A+E Sbjct: 667 GVGVYPDHGTDLADLLKNADTALNWAKSNGGDQIVFYTNEMNIMAMEKVKMESYLRKALE 726 Query: 540 IGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIK 599 EL++VYQPIV++N + ++GAEAL RW G++SP++FI +AE+ G I +G ++ Sbjct: 727 REELYIVYQPIVELNDKRVIGAEALLRWNHPYLGVVSPMEFIPLAEETGLIGSIGNWVLT 786 Query: 600 TAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITET 659 A + + + ++ DF + +NVS Q +P F +K +GL A SLC+E+TE+ Sbjct: 787 EACKQAKEWQEKGF--PDFYISVNVSANQFQQPSFTNEINHALKTSGLSAESLCLELTES 844 Query: 660 VIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA 719 V+ + + H +E+L GV+I+IDDFGTG S+L + +K+D F +I ++ Sbjct: 845 VMIQHSGHTIDRMEELAALGVKIAIDDFGTGYSSLGYLKHLPLHVLKIDKSFVQNIEESS 904 Query: 720 G--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 IV+ + + + + V+ EG+E+ + L L C QGY +P+ Sbjct: 905 PDYAIVQAVSMMGKGLGMQVVVEGIETSEQMVLLSHLNCDLGQGYFISRPV 955 >UniRef50_Q31E09 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31E09_THICR Length = 665 Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 92/308 (29%), Positives = 162/308 (52%), Gaps = 14/308 (4%) Query: 482 ICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIG 541 +C P G+N + + +A+ ++ + F F ++ ++ I + ++++ A++ Sbjct: 364 VCFPKDGDNISTLMKNADIAMYEAKNSGKNRFKFFTESLHKQVIGEIQLEQDMQRALKNN 423 Query: 542 ELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTA 601 E L +QP + +N +++GAEAL RW ++G++ P FI AE G + LG+ ++KTA Sbjct: 424 EFELYFQPKICVNDGSVVGAEALVRWNDPKKGLVPPNDFIPAAEKTGLMVPLGHWVLKTA 483 Query: 602 MGEFRHFSQRASLKD----DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEIT 657 + Q+ + K+ D + IN+SP QL + F + ++ ++G+ L +E+T Sbjct: 484 I------QQQVTWKEQGLADLQISINLSPVQLLDTLFDRKLQALINQSGVDPTKLDIEMT 537 Query: 658 ETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG 717 E+ E ++ +RKQG+ IS+DDFGTG S+L + D++K+D F D Sbjct: 538 ESQFMENTEQNLHSLSTMRKQGINISLDDFGTGYSSLAYLKKFPIDTLKIDKTFIDDYAT 597 Query: 718 TAGKI-VRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP---FSAW 773 +G I + I +A + V+AEG+E E L++ GC QGY P+P F A+ Sbjct: 598 ESGAIFIETIVKIAHTLNLNVVAEGIEQEAQLNYLVQTGCETYQGYYCSAPLPVSEFEAF 657 Query: 774 DKSGKLVK 781 KS VK Sbjct: 658 LKSRTPVK 665 >UniRef50_Q47EJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EJ7_DECAR Length = 695 Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 140/510 (27%), Positives = 232/510 (45%), Gaps = 42/510 (8%) Query: 292 AFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEA----LKIREGDAKEII 347 A +++V +YLM V RR L D +I+A L+I+ E + Sbjct: 196 AAVVLVFAALYLMQFLVVRR----------AQGILEDQEGRIKAARDTLEIQVAARTEEL 245 Query: 348 SIKNSIAEMKDAEIERSNKLLSLISY-DQESGFIKNMAIIE---------SNNNQYLAVG 397 NS E + +E ++ L+ ++Y D +G IE + + LAV Sbjct: 246 KRTNSQLEGEISERRQAQSKLNYLAYHDPLTGLANRRCFIERLEESLSEGERHGEKLAVL 305 Query: 398 IIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL-----CREN 452 I L + V G ++++ + R++E + D ++ L + Sbjct: 306 YIDLDQFKQVNDSLGHGVGDELLVSVAARLSEHVRLIDMLARLGGDEFICLMEAARSEDE 365 Query: 453 VQTFTRKIAMVNDFDSSFGYRNLRIHKS---AICEPLQGENAWSYAEKLKLAISSIRDHM 509 V+ R+I ++ G L + S ++C P G + A+ + Sbjct: 366 VELLAREIIAAFEYPFKLGDHELFLTASVGISLC-PSDGNSVLDLMRNADTAMYRAKMLG 424 Query: 510 FSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVS 569 F F E +E I + +R A++ GEL + QP VD + ++GAEAL RW S Sbjct: 425 RGNFHFYTAEMTREAQERIQMENLLRRALDNGELSVHLQPQVDSRSGQLVGAEALVRWNS 484 Query: 570 AERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQL 629 E G + P++FI +AED G I LG +++ +F + R S + + +N+S QL Sbjct: 485 PELGQVMPIRFIPLAEDSGLIIGLGNWVLRETCRQFMQW--RMSGFELPQVSVNLSVKQL 542 Query: 630 NEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGT 689 P F + I+ E G+ L +E+TE+V+ + + F +E+LR G+ +++DDFGT Sbjct: 543 ERPEFIDVLDKILDETGMDPTLLKLELTESVVMAVGDAFT-PLERLRDLGISLALDDFGT 601 Query: 690 GLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDV 747 G S+L + +K+D F I +G I+R I +LAR V+AEGVE+ + Sbjct: 602 GYSSLSYLKMLPVQQLKIDRSFVEGIGRNSGDEAIIRTIMELARSLGFEVVAEGVETVEQ 661 Query: 748 ARELIKLGCVQAQGYLYQK---PMPFSA-W 773 A L LGC Q QG+L+ + P+ F A W Sbjct: 662 ANFLADLGCEQLQGFLHGQAVSPVEFRARW 691 >UniRef50_A0YEH3 Sensory box/GGDEF family protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YEH3_9GAMM Length = 700 Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 131/449 (29%), Positives = 208/449 (46%), Gaps = 34/449 (7%) Query: 347 ISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE---------SNNNQYLAVG 397 I +K I +D E +LL YD +G + ++E NN LAV Sbjct: 243 IVVKEDITVQRDYE----QQLLRQAHYDDLTGLANRVLLVEKLTQALQNAQQNNSQLAVL 298 Query: 398 IIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVT------FNADLYLLLCRE 451 I L + V G + ++++ QR++ + DIV F L LL + Sbjct: 299 GIDLDDFKNVNDSVGHSIGDTLLKQAAQRLS-SCIRSGDIVARMGGDEFVLVLPLLSDAK 357 Query: 452 NVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICE------PLQGENAWSYAEKLKLAISSI 505 N + ++I V F F + S C P +A LA+ Sbjct: 358 NAELMAQRI--VQKFSKPFNIAGRQY--SVTCSIGISVYPDDTSDAHMMLRNADLAMYQS 413 Query: 506 RDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALC 565 +D ++ F + + E + + +R+ ++ GEL L YQPI ++ T+ I G EAL Sbjct: 414 KDQGRDQYQFFTEDINRRLVERLDLEEKLRNVVDNGELALQYQPIFNLETQKIAGFEALV 473 Query: 566 RWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVS 625 RW A+ +I P FI AE+IG I ++ ++ +A E F S D+ L IN+S Sbjct: 474 RWPQADGSVIMPDSFIPAAENIGVIQKIDEWVLASACRETAPF--LLSGDDNLCLAINIS 531 Query: 626 PWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISID 685 P QL +P + ++ N L+ L +EITE V+ E NI+ L + G+R+S+D Sbjct: 532 PLQLEDPGYVAFVMAQLEANQLEPRHLELEITERVLVSDAETTDRNIKALTELGIRMSVD 591 Query: 686 DFGTGLSNLKRFYEINPDSIKVDSQFTG--DIFGTAGKIVRIIFDLARYNRIPVIAEGVE 743 DFGTG S+L ++K+D F D+ +A ++V I +A+ ++ VIAEG+E Sbjct: 592 DFGTGYSSLGYLKRYPLHTLKIDRSFVADMDVDDSARRLVETIILMAKGLQMDVIAEGIE 651 Query: 744 SEDVARELIKLGCVQAQGYLYQKPMPFSA 772 +E L +LGC QAQGY +P+ + Sbjct: 652 TESQQVLLHELGCSQAQGYFLSRPVSLQS 680 >UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Caulobacteraceae RepID=B8H3B9_CAUCN Length = 748 Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 119/450 (26%), Positives = 201/450 (44%), Gaps = 28/450 (6%) Query: 340 EGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESG------FIKNMA---IIESNN 390 EG A+ ++ + IAE K AE + + L YD + F K++ S Sbjct: 252 EGRAEYLLGVSEDIAERKRAEAQ----IARLAHYDPLTDLPNRVLFQKSLGEALARRSRK 307 Query: 391 NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR 450 LAV + L + V G + +++ +R+ + + D + ++ Sbjct: 308 GDALAVHFVDLDRFKTVNDTLGHPLGDALLKIAAERLRGCVREGDTVARLGGDEFAIVQT 367 Query: 451 --ENVQTFTRKIA-----MVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKLAIS 503 ++ TR A M FD + + P G++A +K +A+ Sbjct: 368 GLDDSNGATRLAARIVEAMAAPFDLQGHHVVIGASVGVSLAPTDGDDADELLKKADMALY 427 Query: 504 SIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEA 563 + + F + A +++ + ++R A++ GE L YQP+ + + G EA Sbjct: 428 RAKADGRGAYHFFERAMDEQLQARRALELDLRRALQAGEFELFYQPLYHLGDERVTGCEA 487 Query: 564 LCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHIN 623 L RW ERG++SP FI +AE+IG I +LG +++ A E ++ + L +N Sbjct: 488 LLRWRHPERGMVSPADFIPLAEEIGLIVQLGEWVLRRACAEAANWPEHVRLA------VN 541 Query: 624 VSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRIS 683 +SP Q + + + +GL A L +EITE+V+ + ++ + L+ GVRIS Sbjct: 542 LSPAQFRDRGLVRTVVSALAASGLPAQRLELEITESVLLQDSQANMTMLHDLKALGVRIS 601 Query: 684 IDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEG 741 +DDFGTG S+L D IK+D F DI A I++ + DL + AEG Sbjct: 602 MDDFGTGYSSLSYLRSFPFDKIKIDQTFVRDILHDSDAMAIIKAVLDLGASMGVVTTAEG 661 Query: 742 VESEDVARELIKLGCVQAQGYLYQKPMPFS 771 VE++ L + GC + QGY +P P S Sbjct: 662 VETQAQLDALRQQGCAEIQGYFISRPAPAS 691 >UniRef50_C5BT20 Ggdef domain/eal domain protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BT20_TERTT Length = 991 Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 108/389 (27%), Positives = 183/389 (47%), Gaps = 20/389 (5%) Query: 404 LEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE--------NVQT 455 + + G D ++++R + R+ + +A C + D ++L+ ++ Sbjct: 599 FKTINEALGHDVGDEVLRLVGLRLRDHFADSCFVARAGGDEFVLVQTSQSSDISALSIDV 658 Query: 456 FTRKIAMVNDFDSSFGYRNLRIHKSA--ICEPLQGENAWSYAEKLKLAISSIRDHMFSEF 513 K+ + G R + I S I P G + A+ + + + Sbjct: 659 QANKVINLLSKPIMLGERTISIGTSVGVIMIPKHGNTILDIMRRGDSALFKAKQAGRNCY 718 Query: 514 IFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERG 573 D IEE + + + +R A+E + + YQP VD + R ++GAE L RW E G Sbjct: 719 AVYDPRMQKSIEERMQVEKGLRIALEQNQFGIFYQPKVDASGR-VVGAEGLVRWSHPEHG 777 Query: 574 IISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPH 633 ISP FI +AE+ G I+ +G I++ G+ + Q ++ + IN+S WQ Sbjct: 778 FISPSVFIPVAEETGLIHLIGEWIMEAIAGDLVRW-QDMKIEPFGDIAINISAWQFGRAD 836 Query: 634 FHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSN 693 F E+ ++ N ++ L +E+TET I + + QLR G+ + +DDFGTG S+ Sbjct: 837 FIEKTLAGIRLNNIRVEQLSIEVTETAILGDMGTTRVKLNQLRNAGISVMLDDFGTGYSS 896 Query: 694 LKRFYEINPDSIKVDSQFT---GDIFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARE 750 L ++ D K+D F GD A +VR + + ++ R+ V+AEGVES++ + Sbjct: 897 LAYLKDLPLDGFKIDRTFVEGLGD--AQAEPLVRSMLSIGKHMRLKVVAEGVESKEQFDK 954 Query: 751 LIKLGCVQAQGYLYQKPMP---FSAWDKS 776 L +GC QGYL+ KPMP F W K+ Sbjct: 955 LKAMGCKLFQGYLFAKPMPVDEFLMWVKN 983 >UniRef50_B1WPA8 Putative uncharacterized protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WPA8_CYAA5 Length = 667 Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 100/337 (29%), Positives = 171/337 (50%), Gaps = 41/337 (12%) Query: 470 FGYRNLR-----IHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEI 524 +GY N + IHK ++G+N S + LK I F I+C + ++ +I Sbjct: 310 YGYNNPQDLLESIHKRTNPVYVEGKNHDSLLDILKTDGEIIN---FQSQIYCKNGEIIDI 366 Query: 525 EENIW---------------------------------IARNIRHAMEIGELFLVYQPIV 551 EE IW + ++R A++ +L L YQPIV Sbjct: 367 EETIWAVYDQCEQILYYQGTVQKVINPQIKGDTLTRIQLETDLRQAIKNKQLSLYYQPIV 426 Query: 552 DINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQR 611 +++T + G EAL RW +G ISP++FI IAE+ G IN LG+ +++ A + + + Sbjct: 427 ELDTGHLSGFEALIRWQHPIKGPISPIEFIPIAEESGLINTLGWWVLEQACYQLQTWQNL 486 Query: 612 ASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLN 671 + ++++NVS QL + + ER ++++ G++ L +EITE+ + ++ Sbjct: 487 NTQAAKLVMNVNVSAQQLKQETWVERLNHLLEKMGVEGKQLKLEITESCLLETVQNETQR 546 Query: 672 IEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLAR 731 + QL+ G+ + IDDFGTG S+L R +E D++K+D F + + IV +I +LA Sbjct: 547 VRQLKNLGLGLCIDDFGTGYSSLSRLHEFPIDTLKIDRSFISKLGISDKVIVPMIINLAH 606 Query: 732 YNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 + V+AEG+E+ + +L L C QG+ + KPM Sbjct: 607 TLGMNVVAEGIETREQFNQLQGLNCELGQGFFFAKPM 643 >UniRef50_A6F781 Putative uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6F781_9GAMM Length = 843 Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 114/444 (25%), Positives = 211/444 (47%), Gaps = 24/444 (5%) Query: 342 DAKEIISIKNSIA--EMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGII 399 D E+I +K + + D+ + N++L I +Q K NN LA+ + Sbjct: 391 DFSELIKVKEQLQYQALHDSLTKLPNRILLDIQIEQGIALSKK-------NNTKLALMFV 443 Query: 400 KLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE--NVQTFT 457 L + + ++G ++++ L + + + F D ++ E N+ Sbjct: 444 DLDDFKKINDLYGHSVGDELLATLGTIFNQMLSAGDSVARFGGDEFIFCFPELDNLADAE 503 Query: 458 RKIAMVND-FDSSFGYRNLRIHKS----AICEPLQGENAWSYAEKLKLAISSIRDHMFSE 512 RK +++ F F I+ S P G+ + K + + + Sbjct: 504 RKAKRISEIFKQHFVINGKSIYSSCSIGVAMYPDDGDASEQLISKADIVLYKSKSQQKGN 563 Query: 513 FIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAER 572 F+F +D +++ ++ + + A+ EL ++YQP +D T I G EAL RW + + Sbjct: 564 FLFFNDTINTQVQRDLLLESELHLAIANNELDVLYQPQIDAATGQIYGVEALVRWYNPKL 623 Query: 573 GIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEP 632 G +SP++FI +AED+G IN++G +IK ++ + F+ R++ + L IN+SP QL EP Sbjct: 624 GHVSPVEFIQVAEDVGIINDIGNFVIKKSLQDILQFNNRSNTQ--LHLSINISPKQLMEP 681 Query: 633 HFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLN--IEQLRKQGVRISIDDFGTG 690 F + E + + +EITE V+ IN+ + ++ +R G+++S+DDFGTG Sbjct: 682 DFVSNVINLTHEMAVDNRLITLEITENVL--INDLAKVQPVLQSIRNSGMKLSLDDFGTG 739 Query: 691 LSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVA 748 S+L + D IK+D F + + +V+ I + ++ + VIAEGVE+++ Sbjct: 740 YSSLSYLSNLPIDEIKIDRSFIDKLLTNDQSESLVKTIIAIGQFCDLTVIAEGVETKEQY 799 Query: 749 RELIKLGCVQAQGYLYQKPMPFSA 772 L C QGY + +P+ +A Sbjct: 800 DHLRHYRCDLVQGYYFDRPLSLAA 823 >UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNS8_9GAMM Length = 944 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 87/255 (34%), Positives = 138/255 (54%), Gaps = 4/255 (1%) Query: 515 FCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGI 574 F D +E + +RHA++ +VYQP VD R ++GAE L RW A+RG Sbjct: 667 FYDPELHRAVEARFELENELRHALDEDRFSVVYQPQVDAEGR-VIGAELLLRWEHAQRGA 725 Query: 575 ISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHF 634 ISP +FI +AE G I +G ++++TA + + A+ +D L +N+S Q +PHF Sbjct: 726 ISPAEFIPVAEQTGLIVPIGRKVLRTACAQLGAWQHTAAFRD-LTLSVNISARQFRDPHF 784 Query: 635 HERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNL 694 I++E G + L +E+TE+++ + +I++LR GV ++DDFGTG S+L Sbjct: 785 VPHLREILQETGAPGDRLKLELTESMLLEEIDTVVAHIDELRALGVEFALDDFGTGYSSL 844 Query: 695 KRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELI 752 ++ +K+D F D+ I +++ +LAR + VIAEGVE+ + L Sbjct: 845 AYLKQLPLAQLKIDQSFVRDVLDDPNDAAIAQMVVNLARTLDLDVIAEGVETVEQRAFLF 904 Query: 753 KLGCVQAQGYLYQKP 767 LGC QG+LY P Sbjct: 905 GLGCRHFQGFLYGYP 919 >UniRef50_B8H226 CHASE4-family GGDEF/EAL protein n=2 Tax=Caulobacter vibrioides RepID=B8H226_CAUCN Length = 735 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 95/287 (33%), Positives = 151/287 (52%), Gaps = 10/287 (3%) Query: 490 NAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQP 549 A A + +A+ +D + F + ++ + ++R A++ G +++ YQP Sbjct: 442 GAVEAARRADVAMYRAKDEGRGRYCFFEAEMDAALKARRGLEADLRLALKDGGVWVAYQP 501 Query: 550 IVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFS 609 VD + +LG EAL RW E+G ISP F+ +AED G I+ELG I++ R F+ Sbjct: 502 QVDAAGK-VLGVEALARWTHPEKGAISPGAFVPLAEDCGLIDELGRLIMR------RAFT 554 Query: 610 QRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFY 669 KD + +NVS Q+ + F + I+ E G +A + +EITE + +E + Sbjct: 555 DSLRWKD-LKVAVNVSALQMRQAGFPDLVAQILAETGARAEKIELEITEGALLGDDEATH 613 Query: 670 LNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIF 727 I +LR+ G +++DDFGTG S+L D IK+D F + G AG +V I Sbjct: 614 DAISRLREMGFSLALDDFGTGYSSLSYLRRYPIDKIKIDRSFITPLGGDKEAGAVVAAIV 673 Query: 728 DLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 LA+ ++ VIAEGVE+ +L ++GCVQAQG+L+ + A D Sbjct: 674 RLAKALKLSVIAEGVETNQQREQLHEIGCVQAQGFLFSAALAADAID 720 >UniRef50_B6ARH3 Putative diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Leptospirillum sp. Group II RepID=B6ARH3_9BACT Length = 1157 Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 129/466 (27%), Positives = 210/466 (45%), Gaps = 40/466 (8%) Query: 337 KIREGDA---KEIIS--------IKNSIAEMKDAEIER--SNKLLSLISYDQESGFIKNM 383 + R GDA + I+S I + + MKD +E+ + L D +G + Sbjct: 673 RARSGDAFITETIVSPILDGQQQISHMLIHMKDITLEKIQEKAIWELAHVDSLTGLMNWN 732 Query: 384 AIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQC 434 A +E+ N+ +AV + L G + + G + N +R + R+ + + Sbjct: 733 AFMETLDREFRQAKEENRKMAVFYLDLDGFKEINDTMGHETGNVFLRTIAGRLRQCPSLS 792 Query: 435 CDIVTFNADLYLLLCRE--NVQTFTRKIAMVNDFDS---SFGYRNLRIHKSAICE--PLQ 487 + D ++LLC++ + QT +I + D S G R+ + S P Sbjct: 793 DSVARIGGDEFVLLCKKTGDFQTLQSEIRTLTDLVSRPVEIGGRSFQTTVSIGVAFYPDD 852 Query: 488 GENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVY 547 + + K +A+ + + F D I+E ++R A+ G +FL++ Sbjct: 853 ADKSADLVRKADIAMYQAKKSK-KGWRFFDQEMEERIQERYRNELSLRQALRSGHIFLMF 911 Query: 548 QPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRH 607 QP +D+ R + G EAL RW +AE +++P FI +AE+ G I ELG + + + E H Sbjct: 912 QPQIDLANRRLRGIEALVRWKNAEGVVLTPKSFIALAEESGIILELGEIVFEQSF-ETLH 970 Query: 608 FSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEH 667 + LK DF L +NVSP Q +F E + + LC+E+TE+++ + + Sbjct: 971 RWETLGLK-DFRLSVNVSPRQFWSKNFWEGLSGRIVRQPEAGKRLCLELTESLLMQNPDE 1029 Query: 668 FYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK-----I 722 + LR GVRI+IDDFGTG S+L D IKV +F + G I Sbjct: 1030 IGNRLSDLRSMGVRIAIDDFGTGYSSLAYLSRFPVDEIKVPQEF---VLGMKNHEQDRMI 1086 Query: 723 VRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 VR I +A+ I ++ EG E+ L LGC QGY +PM Sbjct: 1087 VRTIVQMAQSLGIDLVGEGAETRAEIDMLFGLGCTTLQGYGLARPM 1132 >UniRef50_B8HQZ5 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HQZ5_CYAP4 Length = 872 Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 86/238 (36%), Positives = 130/238 (54%), Gaps = 2/238 (0%) Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 ++ A++ GEL L YQPI D+ + G EAL RW G+ISP FI IAE+ I + Sbjct: 617 DLHRAIDRGELMLSYQPIFDLQRDQLAGFEALVRWQHPTEGLISPSVFIPIAEESELIVK 676 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 LG+ +++ A + + + Q+ D ++ +N S Q +P ER I+ + GLK L Sbjct: 677 LGWWVLQQACTQMQTWQQQFPCSQDLVISVNFSGKQFFQPDVLERIWQILDQTGLKPQHL 736 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +EITETV+ E +++L G+ +SIDDFGTG S+L + ++K+D F Sbjct: 737 KLEITETVLMSYGEVTKAKLKRLSDAGIHLSIDDFGTGYSSLSYLHRFPVQTLKIDRSFV 796 Query: 713 GD--IFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 + + G +IV I LA R+ VIAEGVE+ + +L GC Q QG+L P+ Sbjct: 797 SEMGVQGEGLEIVEAIVTLAHKLRLDVIAEGVETREQLEKLRHFGCDQVQGFLLSPPL 854 >UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H6_9PROT Length = 837 Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 127/460 (27%), Positives = 223/460 (48%), Gaps = 29/460 (6%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGF---------IKNM 383 I A+K EG E ++I + I K AE E + +L YD + I Sbjct: 369 ITAVKDNEGVTTEYVAIFSDITLRKHAEEE----IYTLAFYDSLTKLPNRRHLLDRINQA 424 Query: 384 AIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 I + +N Y A+ + + + + G D + + ++ +R+ + D Sbjct: 425 RSISARSNHYGALLFLDMDRFKILNDTLGHDYGDLFLVEVSRRMRNCVRDMDTVARIGGD 484 Query: 444 LYLLLCRE---NVQTFTRKIAMVND-----FDSSFGYRNLRIHKS---AICEPLQGENAW 492 +++L E + + + K+A++ + + ++ H S +C L E + Sbjct: 485 EFVVLIEEIGTDNEEVSTKVALIAEKIRAALTEPYLLKDKEHHSSPSIGVCLYLGNEESV 544 Query: 493 -SYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIV 551 + LA+ ++ + F D A +E + ++RHA+ +L L YQ + Sbjct: 545 DTLLRHADLAMYQAKESGRNGVRFFDPAMQLAVETRAALEADMRHAVTGKQLRLYYQIQL 604 Query: 552 DINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQR 611 + R LGAEAL RW+ RG++SP +FI IAE+ I E+G+ +++TA + +S+ Sbjct: 605 TSDHRP-LGAEALIRWMHPVRGLVSPAQFIPIAEESSLILEIGHWVLETACKQLVLWSKH 663 Query: 612 ASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLN 671 + + +L INVS Q N+ F + +T++ + L N L +E+TE+V+ Sbjct: 664 ERTR-NLILAINVSAQQFNKHDFVDTVSTLLHLHQLNPNRLKLELTESVVLSDVADVVSK 722 Query: 672 IEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDL 729 + L+ GV++++DDFGTG S+L ++ D IK+D F D+ + +V+ I +L Sbjct: 723 MHALKALGVKLALDDFGTGYSSLSYLKQLPLDQIKIDRSFVSDVTTDPSDAVMVQTIINL 782 Query: 730 ARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 A R+ VIAEGVE+ED L + GC+ QG+L+ KPMP Sbjct: 783 AHNFRMNVIAEGVETEDQLNFLKQNGCMAYQGFLFGKPMP 822 >UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Dickeya RepID=C6CKZ2_DICZE Length = 689 Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 84/245 (34%), Positives = 142/245 (57%), Gaps = 11/245 (4%) Query: 530 IARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGF 589 + ++R A++ G+ + YQPI++++T ++ AEAL RW RG+ISP +FI +AED G Sbjct: 431 LTNDLRTAIQCGQFEVYYQPIIELSTNKVVKAEALVRWRHPIRGMISPAEFIPLAEDTGL 490 Query: 590 INELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHE-RFTTIMKENGLK 648 I LG + + A+ + + R F + IN SP QL F E + + ++GL+ Sbjct: 491 IVPLGDWVARQAITQLAQW--RKIFDPHFQVAINQSPVQLRSKDFTEMTWVQELAQHGLE 548 Query: 649 ANSLCVEITETVI----ERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDS 704 N++ +EITE ++ R+N++ +L R G++I+IDDFGTG S+L + + D Sbjct: 549 GNAVIIEITEGLLLNAESRVNDNLHL----FRDTGIQIAIDDFGTGYSSLAYLRKFDIDC 604 Query: 705 IKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLY 764 +K+D F D+ G ++ I +A + V+AEGVE++ L ++GC AQG+L+ Sbjct: 605 LKIDRSFVEDLDGVGFELCVAIIAMAHSLGLKVVAEGVETQQQCDTLARIGCDYAQGFLF 664 Query: 765 QKPMP 769 +P+P Sbjct: 665 SRPVP 669 >UniRef50_Q4ZXA9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group RepID=Q4ZXA9_PSEU2 Length = 748 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 91/245 (37%), Positives = 135/245 (55%), Gaps = 3/245 (1%) Query: 526 ENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAE 585 + + I +R A+E + + YQPI N ++G EAL RW A GIISP FI IAE Sbjct: 488 DTLMIQNALRQALEDKDFLVFYQPIYSGNCEHLVGVEALVRWNHATMGIISPDAFIPIAE 547 Query: 586 DIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKEN 645 D+G I+ELG ++ A E + + + S D L++NVS +L+ P F +R T I+ Sbjct: 548 DLGIIHELGAWVMHKACSEVQAWRKEFS-HLDLRLNVNVSGKELSHPGFVDRVTRIIAST 606 Query: 646 GLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSI 705 GL A L +E+TE+V + + Q+R+ GVR+++DDFGTG S+L D++ Sbjct: 607 GLPATQLQIEVTESVFLYQPDAIAEILRQIRQLGVRVALDDFGTGYSSLGYIDRYPIDAV 666 Query: 706 KVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYL 763 K+D F + + + IV I L R + + AEGVE+ + L K+GC QGYL Sbjct: 667 KIDRSFVSRMMTYERSEAIVSSILSLGRALNLDITAEGVETAEQYNLLRKMGCPYFQGYL 726 Query: 764 YQKPM 768 +PM Sbjct: 727 LNRPM 731 >UniRef50_C9QFQ1 Sensory box/GGDEF family protein n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QFQ1_VIBOR Length = 831 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 105/386 (27%), Positives = 190/386 (49%), Gaps = 13/386 (3%) Query: 394 LAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENV 453 LAV + L + V ++G ++++ ++ ++ + F D ++ C N+ Sbjct: 432 LAVMFVDLDDFKKVNDLYGHSAGDRLLSEIGKKFDAFLGPNDYVARFGGDEFIF-CFSNL 490 Query: 454 QTFTRKIAMVNDFDSSFGYRNLRIHKS--AICE------PLQGENAWSYAEKLKLAISSI 505 + + + V + F + + K A C P G++ K + + Sbjct: 491 KNLSETESKVEQIKNVFRQQFVIDGKVIFASCSIGVSMYPSDGDDPEELISKADIVLYKS 550 Query: 506 RDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALC 565 + + +F D + +++ + + R +R A++ GEL + YQP V+ T + G E+L Sbjct: 551 KARQKGDVLFFDSSINQQVQYDFLLERELREAIDRGELTVSYQPQVNAKTGELYGVESLL 610 Query: 566 RWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVS 625 RW + + G +SPL+FI++AE+IG I +G +I A EF S + +L IN+S Sbjct: 611 RWYNPQLGQVSPLEFISLAEEIGLIGRIGEFVINKACEEFVQVF--PSPDSELILSINIS 668 Query: 626 PWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISID 685 P QL F ++ +I ++ L + + +EITE V+ I Q+++ G +S+D Sbjct: 669 PMQLMYSGFIQQLQSITDKHQLPSRRITLEITENVLINDLPKVAPVINQVKELGFTVSLD 728 Query: 686 DFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVE 743 DFGTG S+L + D +K+D F + + + +V+ I +AR + V+AEGVE Sbjct: 729 DFGTGYSSLSYLSNLPLDELKIDRVFVDKMLSSEQSDSLVKAILAIARSANMRVVAEGVE 788 Query: 744 SEDVARELIKLGCVQAQGYLYQKPMP 769 +E LI+ GC QGYL ++P+P Sbjct: 789 TEAQRAVLIEYGCDLLQGYLIERPIP 814 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 90/254 (35%), Positives = 139/254 (54%), Gaps = 5/254 (1%) Query: 519 AKLNEIEENIW-IARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISP 577 A++N +N + I ++R A++ E + YQP++D+ T I EAL RW +G++ P Sbjct: 830 AEMNAAADNYFQIESDLRRAVDRNEFEVFYQPVIDLKTHRITSYEALVRWRHPTKGLVGP 889 Query: 578 LKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHER 637 +FIT+AE+ G I E+G +++ A + R + +L +N+SP Q N+P+ E Sbjct: 890 AQFITVAEESGLIGEIGTIVLRQACSQLRSWIDEGFTSP--ILALNLSPIQFNDPNLTEG 947 Query: 638 FTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRF 697 I+++ L + + +EITETVI + E ++ L +G R+SIDDFGTG S+L Sbjct: 948 ICRILRDYDLTPDRIELEITETVIMQDGELALGTLQNLSSRGFRLSIDDFGTGYSSLAYL 1007 Query: 698 YEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLG 755 D++K+D F D+ IV I LA + VIAEGVE+++ L L Sbjct: 1008 KRFPVDTLKIDRSFITDMTANENDRAIVTAIMALANSLHLSVIAEGVETKEQYDLLSALN 1067 Query: 756 CVQAQGYLYQKPMP 769 C AQGY KPMP Sbjct: 1068 CNFAQGYYMAKPMP 1081 >UniRef50_D2LS52 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LS52_BACS4 Length = 607 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 103/370 (27%), Positives = 183/370 (49%), Gaps = 16/370 (4%) Query: 417 NKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL-----CRENVQTFTRKIAMVNDFDSSFG 471 +K+++ + Q ++ + I + D + +L +E VQ ++I + F+S F Sbjct: 230 DKLIQSISQTLSSIQHKKVQIYRYGGDEFSVLFHSPKSKEEVQELAQEILLA--FESPFH 287 Query: 472 YRNLRIHKSAICE----PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEEN 527 + ++ +A P+ G ++ ++A+ ++ +F + + E +E Sbjct: 288 VKGNELYITASIGISYFPVIGVTYDQIIQQAEMAMHYAKELGKGDFQWYQSSIRTEHDEK 347 Query: 528 IWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDI 587 + + + +R AME L Y P +D+ ++G EAL RW + G +SP KFI IAE+ Sbjct: 348 LLMEKRLRIAMEQENFELYYHPQIDLKENKVIGVEALLRWNDEQLGKVSPYKFIPIAEET 407 Query: 588 GFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGL 647 G IN++G +++ A + + ++ + + IN+SP Q P F + + + GL Sbjct: 408 GLINQIGDWVLEKACIQAKKWNNEGH---ELRIGINISPQQFQRPDFVSKVKNTLDKTGL 464 Query: 648 KANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKV 707 L +EITE + + + +L++ GV ISIDDFGTG S+L D++K+ Sbjct: 465 SPKLLDLEITENDLLYNRDECLKTLYRLKQFGVSISIDDFGTGYSSLSYLRRFPIDTLKI 524 Query: 708 DSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQ 765 D F ++ IV I LA ++ VIAEGVE+ ++ L KL C + QG+LY Sbjct: 525 DQSFIKEVVDNTNDQAIVTSIIQLAHNMKLRVIAEGVETSEMVAFLNKLSCDEMQGFLYS 584 Query: 766 KPMPFSAWDK 775 +P+P A K Sbjct: 585 QPLPPEAVTK 594 >UniRef50_A2SC87 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SC87_METPP Length = 816 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 141/524 (26%), Positives = 244/524 (46%), Gaps = 56/524 (10%) Query: 285 KLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAK 344 +L ++ AF ++ + V +++ RR + + L + L D +A+ R D Sbjct: 291 RLQWILLAFTLVAIAVFAVVSVYTARRITTPLKTLAGSARRL-GQGDYEQAVPARTDD-- 347 Query: 345 EIISIKNSIAEMKDAEIERSNK---------LLSLISYDQESGFIKNMAIIESNNNQYLA 395 EI + + M+ A ER + L L + +Q ++ N+ A Sbjct: 348 EIGELAQAFETMRLAVREREGEVRRLAFEDGLTQLPNREQFRADLRAAIQHAQARNEPCA 407 Query: 396 VGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTF-----------NADL 444 V ++ L + V V G +++++++ +R+ ++ + D+V +AD+ Sbjct: 408 VLMLDLDRFKHVNDVLGHRFGDRLLQEVAKRLTQEARRSNDVVARLGGDEFAMLMPSADI 467 Query: 445 YLLL-CRENVQ-TFTRKIAMVN---DFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLK 499 L L + +Q F R I++ + D + G C P G A + + + Sbjct: 468 ALALGIAQRIQRAFERPISLDDHTVDLGAGIGI---------ACCPAHGVEADTLVSRAE 518 Query: 500 LAISSIRDHMFSEFIFCDDAKLN-EIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAI 558 LA+ + + H ++ DA L+ +E++ + +R A++ +L L QP + + T A+ Sbjct: 519 LAMYAAKQHQLGVKVY--DAALDMSSDESLSLLSELRTAVDRDQLRLYLQPKISLATGAV 576 Query: 559 LGAEALCRWVSAERGIISPLKFITIAEDIGFINEL-GYQIIKTAMGEFRHFSQRASLKDD 617 LGAEAL RW +RG++ P KFI AE GFI L G+ I ++AM + + +LK Sbjct: 577 LGAEALVRWQHPQRGLVPPGKFIPFAEQTGFIRVLTGWMIERSAMVLRQMNAGAPALK-- 634 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK 677 + +N+S L + + ++ L S+C+EITE+ I + +E+L Sbjct: 635 --ISVNLSTRDLLDQDLPAKMQRLIDTLALNPGSMCLEITESAIMDDPQRALQTLERLHA 692 Query: 678 QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA-----GKIVRIIFDLARY 732 G ++SIDDFGTG S+L + D +K+D F +F KIVR DLA Sbjct: 693 MGFKLSIDDFGTGYSSLAYLKRLPVDELKIDQSF---VFNMERDLDDAKIVRSTIDLAHN 749 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP---FSAW 773 + V+AEG+E+ + L LGC +AQGY KPMP F+ W Sbjct: 750 LGLNVVAEGIETAKAWKLLQALGCDEAQGYFVAKPMPEALFADW 793 >UniRef50_A1TV44 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TV44_ACIAC Length = 772 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 115/404 (28%), Positives = 190/404 (47%), Gaps = 28/404 (6%) Query: 388 SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKY-AQCCDIVTFNADLYL 446 + + L+V + L + V V G +++++ + RIA AQ + + + Sbjct: 368 GRSGEPLSVIALDLDRFKQVNDVLGYALGDRLLQAVVARIASHLRAQREVVARLGGNEFA 427 Query: 447 LL--------CRENVQTFTRKIAMVNDFDSSFGYRNLRIHKSA----ICEPLQGENAWSY 494 +L R+ Q TR F+S + + + SA C P +A + Sbjct: 428 VLLPGADEASARDTAQRITRA------FESPLVFDDQMVDLSAGIGIACWPGPAHDADTL 481 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 ++A+ + + + I+ D + + E + + +R A+E GEL L QP + ++ Sbjct: 482 LGHAEIAMYAAKRRLHGAQIY-DPSMESSSAEALSLLSELRRAVEAGELRLFLQPKLRLD 540 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 + GAEAL RW RG++ P++FI AE GF+ +L I + A R+ ++ Sbjct: 541 GQGGSGAEALVRWQHPVRGLVPPMQFIPFAEQTGFVRQLTLWIFEQAA---RYLARPQVQ 597 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 + +N+S L + R T+M +G++ S C+EITE+ I + + Sbjct: 598 GLGLRISVNLSTRDLMDTDLSTRLGTLMARHGVEPGSFCLEITESAIMDDPGRAEAMLNR 657 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARY 732 L QG ++SIDDFGTG S+L + D +K+D F + AG +IVR DLA Sbjct: 658 LSAQGFKLSIDDFGTGYSSLAYLKRLPVDELKIDKSFVMGMAADAGDAQIVRSTIDLAHN 717 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP---FSAW 773 + V+AEGVES + +L L C +AQGY +PMP F AW Sbjct: 718 LGLSVVAEGVESAAILEQLRGLRCDEAQGYHIGRPMPADDFLAW 761 >UniRef50_A0LT36 Diguanylate cyclase/phosphodiesterase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LT36_ACIC1 Length = 547 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 103/389 (26%), Positives = 178/389 (45%), Gaps = 18/389 (4%) Query: 393 YLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR-- 450 Y + ++ + G + + A+ G ++++ + R+A + + AD + +L R Sbjct: 142 YAGLLVVNIRGFKQINAIVGHSAADQLLTNIAMRLASRVRHRDVVARLGADEFAVLLRDF 201 Query: 451 ---ENVQTFTRKI--AMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKLAISSI 505 E +R I A+ FD + L + P + + + +A+ + Sbjct: 202 NRPEGADAMSRAILRALREPFDVAGLPLTLDVAAGLAVAPRDADTSAELLRRAMVALQAA 261 Query: 506 RDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALC 565 R A E + + + A+ G+L L YQ VD+ T +G EAL Sbjct: 262 RHARSPAVENYRPAHDPAGAERLTLHAELDAALRTGQLVLHYQSTVDLATGRTVGVEALL 321 Query: 566 RWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVS 625 RW RG++ P +F+ AE I + ++ A+ H+ Q+ + +N+S Sbjct: 322 RWQHPRRGLLRPAEFLPAAEQSELIGLVTSYVLDAALASAVHWRQKGIA---LPVSVNIS 378 Query: 626 PWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLN---IEQLRKQGVRI 682 L++P F +R T++ +G+ A+ L +EITET +N Y ++LR GVR+ Sbjct: 379 ARDLHDPSFPDRVDTLLHLHGVPADRLTLEITETT---LNSRLYPADAVAKKLRDLGVRL 435 Query: 683 SIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIPVIAE 740 S DDFGTG + L R ++ +K+D+ I G K IV + +L R + V+AE Sbjct: 436 SCDDFGTGTTPLPRLRDLPLAELKIDNTLIAGIVGDDDKRAIVAAVVELGRVFDLTVVAE 495 Query: 741 GVESEDVARELIKLGCVQAQGYLYQKPMP 769 G+E +D LI+LGC QGY + P+P Sbjct: 496 GIERQDEREVLIRLGCTTGQGYYFSPPVP 524 >UniRef50_B8DMV5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Desulfovibrio vulgaris RepID=B8DMV5_DESVM Length = 663 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 110/384 (28%), Positives = 196/384 (51%), Gaps = 10/384 (2%) Query: 395 AVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQ 454 AV + L + V G ++++R++ +R+AE + +D ++LL E V+ Sbjct: 267 AVAFLDLDRFKVVNDSMGNSAGDQVLREVARRLAENTRTIDTVSRLGSDEFILLLDE-VR 325 Query: 455 TFTRKIAMVNDFDSSF------GYRNLRIHKS-AICEPLQGENAWSYAEKLKLAISSIRD 507 + + V +S R +RI S + G NA +A+ +++ Sbjct: 326 SEEEALITVQRICTSLEPPLEVAGRQIRISASVGVVMNRGGGNADEMLRNANIAMHHVKE 385 Query: 508 HMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRW 567 H + L + + + ++ A++ E FLVYQPI+ ++ R + G EAL RW Sbjct: 386 HGGDGMAVFQPSMLEQAMNLMQLEIDLHRALDNNEFFLVYQPIMSLHDRRLTGFEALVRW 445 Query: 568 VSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPW 627 +RGI+ P +FI ++E G I+++G+ ++ A + ++ ++H+N+S Sbjct: 446 NHPDRGIVGPSEFIPVSESTGQIHQVGHWVLAEACRALAAWREQQPSMRSVIMHVNLSAR 505 Query: 628 QLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDF 687 QL++P E+ +++E GL A L +E+TET++ ++ L + +L++ GVR+ IDDF Sbjct: 506 QLSQPGLVEQVAAVLRETGLPARCLKLEVTETMLMENPDYANLVLRRLKEIGVRLCIDDF 565 Query: 688 GTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESE 745 GTG S+L + D++KVD F + G KIV+ + LA + V+AEGVE E Sbjct: 566 GTGYSSLSYLQQFPIDTLKVDQSFVARMCREPGHFKIVQAVVALAHSLGLDVVAEGVEEE 625 Query: 746 DVARELIKLGCVQAQGYLYQKPMP 769 + L +L C QGYL+ +P+P Sbjct: 626 EQRIMLSELSCEGGQGYLFSRPVP 649 >UniRef50_C1DLU9 Cyclic di-GMP signal transduction protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DLU9_AZOVD Length = 834 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 119/392 (30%), Positives = 190/392 (48%), Gaps = 11/392 (2%) Query: 389 NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA--DLYL 446 Q LA+ + L + V G + ++ +L R+ EK + D+V+ + Sbjct: 431 KQRQPLALIFMDLDNFKNVNDSLGHKVGDALLVELAARL-EKVLRPRDMVSRQGGDEFMF 489 Query: 447 LLCRENVQT---FTRKIAMVNDFDSSFGYRNLRIHKS-AICE-PLQGENAWSYAEKLKLA 501 LL +V+T T I + G L + S IC P G + + + +A Sbjct: 490 LLPEADVRTAEQMTECIKRSVEVPIQVGQYTLHVSASMGICMFPQDGRDLETLSSHADIA 549 Query: 502 ISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGA 561 + + S + F + ++ + +R A++ G+L + YQP DI R + GA Sbjct: 550 MYRAKQERRSHYAFFSEEMQACAARSLLLEGALREAVQWGQLDVYYQPQFDITGRKLEGA 609 Query: 562 EALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLH 621 EAL RW E G ISP +FI IAE G I ++G +++ A + RH+ A L D + Sbjct: 610 EALVRWRHPELGFISPAEFIPIAEITGQIIKIGDLVLRRATQQMRHWLD-AGLPGDMSIA 668 Query: 622 INVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVR 681 +N+S Q + E+ T + E+ L +L +E+TE+V E + LR +GV+ Sbjct: 669 VNISMAQFRDTALLEKIDTALAESQLPPWALELELTESVAMDDPEQVVDIVRSLRSRGVK 728 Query: 682 ISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIA 739 +SIDDFGTG S+L ++ +K+D F I G+ IV+ I LA+ + IA Sbjct: 729 LSIDDFGTGYSSLSYLKKLRVHKLKIDRSFIQAISSAGSDRSIVQAIIGLAKDLDMQTIA 788 Query: 740 EGVESEDVARELIKLGCVQAQGYLYQKPMPFS 771 EG+E+E+ + L LGC QGYL+ KP+P S Sbjct: 789 EGIETEEQRQLLEALGCDSGQGYLFCKPLPAS 820 >UniRef50_Q2BLE3 C-di-GMP phosphodiesterase A-related protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLE3_9GAMM Length = 821 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 97/286 (33%), Positives = 150/286 (52%), Gaps = 3/286 (1%) Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELF 544 P Q N+ + A+ ++ + F F D + +E + + + + A+E GEL Sbjct: 504 PEQNSNSGDILRRADTALYRVKAKSRNGFQFYDPEMQSSAQERLNVEKGLHQAIEHGELE 563 Query: 545 LVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGE 604 L YQP + I GAEAL RW ERG++ P FI IAED G I E+G ++ + + Sbjct: 564 LWYQPQIGAKGECI-GAEALLRWNHPERGLVFPGDFIQIAEDSGQIVEIGNWVLAQGVSQ 622 Query: 605 FRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERI 664 + + +R L +NVSP Q + F +R +T++ E+G+ L +EITE ++ Sbjct: 623 LKGWMERGLPSTFRRLAVNVSPLQFMQVDFVDRVSTLLDESGIPGFMLELEITENMLLNN 682 Query: 665 NEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKI 722 E ++ L+K+GV +IDDFGTG S+LK + D +K+D F D+ I Sbjct: 683 FEIASQKMKLLKKKGVSFAIDDFGTGYSSLKYLRHLPLDILKIDRSFVTDLRPHSEQAAI 742 Query: 723 VRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 V++I A + VIAEGVE+ + L +LGC QGYL+ KP+ Sbjct: 743 VQVIIATADRLDLVVIAEGVETTEECNTLSQLGCNCFQGYLFSKPV 788 >UniRef50_C6BSB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BSB1_DESAD Length = 938 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 109/393 (27%), Positives = 195/393 (49%), Gaps = 12/393 (3%) Query: 390 NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC 449 +N Y AV + L + + G + +K++ ++ +R+ + + + F D ++++ Sbjct: 534 DNYYFAVVFMDLDRFKIINDSLGHNIGDKLLVEVSKRLLQTIRELDTVSRFGGDEFIVVL 593 Query: 450 ------RENVQTFTRKIAMVNDFDSSFGYR-NLRIHKSAICEPLQGENAWSYAEKLKLAI 502 RE ++ R +ND G++ N+ + P + + + +A+ Sbjct: 594 EELASPREGIRIVRRIRDCLNDPIMIEGHKINIAASYGVLLSPTEYDKPEEIIQNANVAM 653 Query: 503 SSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIG-ELFLVYQPIVDINTRAILGA 561 ++ + L E + + + ++R AM G EL+L YQPI + +++++G Sbjct: 654 HQAKESGRDRIKVFNKRMLEEAVQAMQLESDLRAAMLSGDELYLDYQPIYSLQSQSVVGF 713 Query: 562 EALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLH 621 EAL RW RG++ P +FI +AE+ G I ELG ++ A + + + + ++ Sbjct: 714 EALIRWEHPRRGLVMPGEFIPMAEESGLIFELGSWVVSEACRQMKSWQVNYDSASEMMMS 773 Query: 622 INVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVI-ERINEHFYLNIEQLRKQGV 680 IN+SP Q ++P + + + E L A +L +EITET I ER + + + +L+ GV Sbjct: 774 INISPRQFSQPALVDNILSKLSEFDLPARNLKIEITETAIMERAKQSVDM-LNRLKSAGV 832 Query: 681 RISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVI 738 +SIDDFGTG S++ E D +K+D F + + +IVR I +LA + V+ Sbjct: 833 LVSIDDFGTGYSSMSNLQEFPLDQLKIDLSFVRKMNESTENLEIVRAIVNLAHNLGLNVV 892 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPMPFS 771 AEGVE + L LGC QGYL+ KP+ S Sbjct: 893 AEGVEEIEQQDALRDLGCEFGQGYLFSKPISRS 925 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 118/445 (26%), Positives = 204/445 (45%), Gaps = 22/445 (4%) Query: 341 GDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI-KNM------AIIESNNNQY 393 GD I + N + AE +L+ S+D +G +N+ I + + Sbjct: 245 GDVTHFIGVLNDVTARTHAE----KRLIHQASHDALTGLPNRNLLNDRITHAIARSRGRL 300 Query: 394 LAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE-- 451 AV + L + V +G + ++R++ R++ + D +++L + Sbjct: 301 TAVMFLDLDRFKLVNDSYGHAVGDALIREVANRVSACLRAGDTVARLGGDEFVVLLEDLA 360 Query: 452 NVQTFTRKIAMVND-FDSSFGYRNLRIHKSA----ICEPLQGENAWSYAEKLKLAISSIR 506 +++ R A + D S +L + SA P G + + +A+ + Sbjct: 361 SIEDAARLAAKLRDRLSESVRIGSLELPLSASIGVALAPRDGRDPEMLLKNADIAMYRAK 420 Query: 507 DHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCR 566 + + + F + + + +R A+ GEL YQP VD+ T A+ GAEAL R Sbjct: 421 ERGRNNYCFYGPEMDHHARRRLTVESELRRALAGGELEAHYQPQVDLATGALTGAEALVR 480 Query: 567 WVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSP 626 W ER ++ P +FI +AE+ G I LG Q+++ A + + R + + D + +N+S Sbjct: 481 WRHPERCLLLPGEFIAVAEETGLIVPLGEQVLRAACRQSTRW--REAGRPDLKVAVNLSG 538 Query: 627 WQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDD 686 Q + E+ I+ E G A L +EITE+V + + LR+QG+ ++IDD Sbjct: 539 HQFRQHDLVEQVCDILAETGAHAAQLELEITESVAMADADGSVATLAGLRRQGIALAIDD 598 Query: 687 FGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVES 744 FGTG S+L D++K+D F I G IV+ I +AR R+ ++AEGVE+ Sbjct: 599 FGTGYSSLSYLKRFPIDTLKIDRSFIQGIPADGDDTAIVQAIIAMARSLRLSLLAEGVET 658 Query: 745 EDVARELIKLGCVQAQGYLYQKPMP 769 L+ GC QG+L+ + MP Sbjct: 659 PAQREFLVAQGCRSGQGFLFGRAMP 683 >UniRef50_A0YP30 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YP30_9CYAN Length = 352 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 86/248 (34%), Positives = 137/248 (55%), Gaps = 7/248 (2%) Query: 523 EIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFIT 582 E+ E + + + A++ E L YQPIV I+G EAL RW RG ++P++FI Sbjct: 94 EVIEKFRLEKELHQALKQDEFVLFYQPIVCTQNAKIVGFEALIRWQHPRRGWVTPIEFIP 153 Query: 583 IAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIM 642 +AE+ G I +G +++ A + + ++ L + +N+S QL+ P R I+ Sbjct: 154 LAEETGLIQLIGDWVLRQACQQLEIWQEQFPLDSSLKMSVNLSSLQLSNPQLSLRVQQII 213 Query: 643 KENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINP 702 ++ L SL +EITET + N++ L++QGV + IDDFGTG SNL R + + Sbjct: 214 QQTHLNPESLQLEITETAFLENSSIALANLQNLKQQGVSLHIDDFGTGYSNLSRLQDWSI 273 Query: 703 DSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQ 760 D +K+D+ F GK +++ I LA+ + VIAEGVE+E +L +LGC Q Sbjct: 274 DVLKIDNSFV-----RTGKWNMIQAILMLAQSLNLEVIAEGVETEQDWVQLQQLGCPYLQ 328 Query: 761 GYLYQKPM 768 GYL+ +P+ Sbjct: 329 GYLFSRPV 336 >UniRef50_B9R2A8 Cyclic diguanylate phosphodiesterase domain protein n=2 Tax=Labrenzia RepID=B9R2A8_9RHOB Length = 685 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 92/255 (36%), Positives = 134/255 (52%), Gaps = 5/255 (1%) Query: 515 FCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGI 574 F D +L +EN+ + +++ A+E E L +QPI + + AEAL RW+ E+G+ Sbjct: 419 FHDTMRLRR-DENLALKKDMERAIEEDEFALYFQPIALTASSETVSAEALIRWLHPEKGL 477 Query: 575 ISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHF 634 + P +FI +AED G IN +G + ++ F +R D + +NVSPWQL++P F Sbjct: 478 VPPDQFIPLAEDTGLINRIGAWVCRSVAQAQVRFRKRGF---DISISMNVSPWQLSDPEF 534 Query: 635 HERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNL 694 + G + +EITE V+ + +L+ G I IDDFGTG SNL Sbjct: 535 TALMMDLPDLYGCDPTKIILEITENVVLGEIPDALTALNELKIIGYSIVIDDFGTGYSNL 594 Query: 695 KRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKL 754 Y D IK+D F DI G IV++I LA V+AEGVE+ + L + Sbjct: 595 AYLYNYPIDGIKIDRIFINDI-SNGGAIVKLILSLADALGATVVAEGVETIEQRDWLTEN 653 Query: 755 GCVQAQGYLYQKPMP 769 GC + QGYLY KP+P Sbjct: 654 GCDRFQGYLYSKPVP 668 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 119/454 (26%), Positives = 212/454 (46%), Gaps = 25/454 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNNQ 392 I A++ G ISI E +AE + L YD +G + N ++ Q Sbjct: 461 ITAVRDEHGKVVNYISIARDTTEQTEAE----KNIHFLAYYDVLTG-LPNRTLLRDRLGQ 515 Query: 393 YLAVG----------IIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 +AV + L + + G +++++ + RI + + + Sbjct: 516 MIAVAHRDKHQFSLIFLDLDRFKYINDSMGHSVGDRLLQSVALRIQDCVREGDTVARLGG 575 Query: 443 DLYLLLCRENVQTFTRK------IAMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAE 496 D +++L RE ++ IA+ +D + + P Q ++A + + Sbjct: 576 DEFIVLLREAGESAASVVAQKLLIALATPYDLDGQVISTQASIGISIYPDQAQDADTLIK 635 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 +A+ ++ + F F ++ + +++R A+E GELFL YQP D+ + Sbjct: 636 NADMAMYRAKEEGRNNFQFFVPEMNFRVDLLFSMEKDLRLALERGELFLQYQPQADLASG 695 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 + G EAL RW +G +SP +FI +AE+ G I +G +++TA + + R + Sbjct: 696 TLSGVEALIRWDHPVKGQVSPAEFIPVAEETGQIVAIGEWVLRTACSQMAEW--RKTGMH 753 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 D + +N+S QL +P E +++ E GL A L +EITE ++ N+ + + +++ Sbjct: 754 DLTIAVNLSIRQLRQPDLAELIKSVLLETGLDARHLELEITEGIMMGDNQAAFRFLSEMQ 813 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNR 734 GV++SIDDFGTG S+L ++ + +K+D F DI G I+R I L Sbjct: 814 DLGVQLSIDDFGTGFSSLNYLKQMPVNKLKIDQSFIRDIETDEGDAAIIRSIISLGHRLN 873 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 + VIAEGVE+++ L GC + QGY Y +P+ Sbjct: 874 LRVIAEGVETQEQLDFLRIRGCDEIQGYFYSRPL 907 >UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQL8_BACS4 Length = 1016 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 90/247 (36%), Positives = 141/247 (57%), Gaps = 6/247 (2%) Query: 526 ENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAE 585 E + +R A+E E L YQP + +LG EAL RW S++RGI+SP++FI +AE Sbjct: 763 ERFQMENQLRKALEREEFVLHYQPQFHLENNEVLGIEALLRWNSSDRGIVSPMEFIPLAE 822 Query: 586 DIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKEN 645 + G I +GY ++K A + + + + ++ +N+S QL E F + +I+++ Sbjct: 823 ETGLIIPIGYWVLKEACRQNKRWMDQGHRPK--IVSVNISARQLQEKDFVQAVKSILEDT 880 Query: 646 GLKANSLCVEITE-TVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDS 704 L LC+EITE T I+ I+ + +++L + G++I+IDDFGTG S+L ++ + Sbjct: 881 QLPTQYLCLEITESTAIKNIDISMNM-LKELGELGIKIAIDDFGTGYSSLAMLKQLPISN 939 Query: 705 IKVDSQFTG--DIFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGY 762 IK+D F D+ G IVR I +A + V AEGVE+ED L++ C QGY Sbjct: 940 IKIDKSFIRDMDVDKDDGAIVRAIIAMAHSLELTVTAEGVETEDQKNILLQEKCNYLQGY 999 Query: 763 LYQKPMP 769 LY KP+P Sbjct: 1000 LYSKPLP 1006 >UniRef50_C3J4U2 Diguanylate phosphodiesterase n=1 Tax=Geobacillus sp. Y412MC52 RepID=C3J4U2_9BACI Length = 348 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 84/229 (36%), Positives = 130/229 (56%), Gaps = 8/229 (3%) Query: 545 LVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGE 604 L+YQPIVD+ T+A+ E L RW +GI+ P FI +AE+ G I +G I+ A + Sbjct: 108 LLYQPIVDVRTKAVCAMETLIRWHHPSKGIVPPSDFIPLAEETGLIIPIGEWTIRQACRQ 167 Query: 605 FRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERI 664 + ++ + + +NVS +L P F R I+ E ++ + L +EITET+ Sbjct: 168 HERWRRQGFIP--VRMAVNVSVKELYHPQFAARVEAILAETNMRPSWLELEITETIAIYQ 225 Query: 665 NEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI----FGTAG 720 N+ +L++ GVR+SIDDFGTG S+L +++ D++K+D F D +G+ Sbjct: 226 EATILANLHRLKEMGVRLSIDDFGTGYSSLAYLKQLDIDTVKIDRTFIADCPHSHYGSI- 284 Query: 721 KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 I I LAR+ + V+AEGVE E+ L + GC +AQGYL++ PMP Sbjct: 285 -ITSTIISLARHLGMNVVAEGVEREEQLEYLREKGCQEAQGYLFRPPMP 332 >UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89HX5_BRAJA Length = 799 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 95/289 (32%), Positives = 148/289 (51%), Gaps = 8/289 (2%) Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELF 544 P G NA + LA+ + + F + + + ++R A++ E Sbjct: 502 PQDGSNADELLKNADLALYRAKADGRGTYRFFETGMDARAQARRLLEMDLRAALQRDEFQ 561 Query: 545 LVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGE 604 YQPI D+ + ++ EAL RW +RG+I+P+ FI +AE+ G I +LG ++++A Sbjct: 562 PYYQPIRDVASGRVVVFEALLRWNHPQRGLIAPINFIPLAEETGLIVQLGEFVLRSAC-- 619 Query: 605 FRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERI 664 + A+ DD + +N+SP Q P+ T + +GL A L +EITE+V+ + Sbjct: 620 ----TDAATWPDDVDVAVNLSPVQFRNPNLIASVTAALTVSGLPARRLELEITESVLLQN 675 Query: 665 NEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKI 722 +E + +LR GVRIS+DDFGTG S+L D IK+D F ++ + I Sbjct: 676 SEATLTTLHELRAMGVRISLDDFGTGYSSLSYLRSFPFDKIKIDRSFVSELATREDSMAI 735 Query: 723 VRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFS 771 +R + L R I AEGVE++ L + GC QAQGYL+ KP P S Sbjct: 736 IRAVTGLGRSLGIVTTAEGVENDAQLELLRREGCTQAQGYLFSKPRPAS 784 >UniRef50_C6WMG3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WMG3_ACTMD Length = 718 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 90/238 (37%), Positives = 138/238 (57%), Gaps = 9/238 (3%) Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 ++R A+ +L L YQPIVD+ T AI GAEAL RW RG++ P +FI +AE G I Sbjct: 474 DLRAAIGTDQLVLHYQPIVDLATTAISGAEALVRWERPGRGLLGPGEFIGLAEQTGLIVP 533 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 LG ++ +A + + RA+ + + + +NVS QL+ P F + +GL+A++L Sbjct: 534 LGSSVLTSACTQAAGW--RAAGR-ELGVTVNVSTRQLSAPGFLAALAKSLDVSGLQASAL 590 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +E+TE+V +E + +R+ GVR+++DDFGTG S+L + D +K+D FT Sbjct: 591 TIEVTESVWA--DEAAMRALMAVRETGVRVALDDFGTGYSSLSYLHRYPFDVVKIDKSFT 648 Query: 713 ---GDIFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKP 767 GD TAG +VR I DLA +AEG+E+ + A L + GC QG+L+ +P Sbjct: 649 WALGDTGRTAG-VVRCIIDLADVLGAVTVAEGIETPEQAEWLRRAGCGFGQGFLFGRP 705 >UniRef50_B9JAE4 GGDEF family protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JAE4_AGRRK Length = 738 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 89/275 (32%), Positives = 145/275 (52%), Gaps = 9/275 (3%) Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 + LA+ ++ + I + A + EE + ++R+A++ EL + YQP+VD + Sbjct: 447 RADLAMYKAKEAGRARMICYETAMDTDREERNALELDLRNAIDRQELTVAYQPLVDAVSH 506 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 I G EAL RW G +SP FI IAE G I LG +++ A R + Sbjct: 507 DITGVEALVRWNRPGYGPVSPDAFIPIAETSGLIEALGLLVLRKACAAARQWP------- 559 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 D + +NVSP Q P F + ++K+ ++A + +EITE + + E +IE+L+ Sbjct: 560 DLRIAVNVSPGQFRNPAFADYVRHVLKDAEIEAERVTLEITEGYMIQNPERTRQSIERLK 619 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNR 734 K GV++++DDFG+G S++ + D IK+D T D+ + +++ LAR Sbjct: 620 KLGVKVALDDFGSGFSSIGYLRQFGFDRIKIDRSLTMDVLTDSRSRDMLQATVALARSLD 679 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 +PV AEG+E+E+ L GC + QGY + KPMP Sbjct: 680 LPVTAEGIETEEQGTALKLFGCDELQGYFFGKPMP 714 >UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY75_PSYIN Length = 591 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 90/253 (35%), Positives = 141/253 (55%), Gaps = 4/253 (1%) Query: 524 IEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITI 583 I I + +R A+E + L YQ +D + R +LGAEAL RW + E G++ P FI I Sbjct: 332 INARITLENELRIAIEKSQFHLYYQIQMDSDNR-VLGAEALIRWTNPEHGLVLPATFIPI 390 Query: 584 AEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMK 643 AE+ G I +G +I+TA + + + Q+ S D L +NVS Q + F ++ + ++ Sbjct: 391 AEETGLILSIGKWVIETACAQIKVW-QKKSQTRDLTLAVNVSAKQFRQKDFVDQVQSAVQ 449 Query: 644 ENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPD 703 + + N L +E+TE++++ E ++ L K GV+ S+DDFGTG S+L+ + D Sbjct: 450 RHAIPGNLLKLELTESLLQYDTEVTIAMMKALNKIGVQFSLDDFGTGYSSLQYLKRLPLD 509 Query: 704 SIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQG 761 K+D F DI IV+ I +A+ I VIAEGVE+E+ + L+ GC QG Sbjct: 510 QFKIDQSFVRDIATDNNDKAIVKAIIAMAQILDIDVIAEGVETEEQQQLLLGKGCTLYQG 569 Query: 762 YLYQKPMPFSAWD 774 YL+ KP+P +D Sbjct: 570 YLFSKPIPIDQFD 582 >UniRef50_Q89U68 Blr1551 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89U68_BRAJA Length = 566 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 87/239 (36%), Positives = 128/239 (53%), Gaps = 8/239 (3%) Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 ++R AM+ E L YQPI D+ I G EAL RW +RG++ P +FI IAEDIG I Sbjct: 308 DLREAMDKDEFTLFYQPIYDLRMDRISGFEALLRWPHPKRGLVPPDQFIPIAEDIGLITP 367 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 LG ++ R Q A + + +NVS Q+ +P F E + + L + L Sbjct: 368 LGEWVLN------RACEQAAGWPSELKIAVNVSATQIRDPRFAEVIANALDASTLAPHRL 421 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +EITE+V+ + + +L+ QG+ I++DDFGTG S+L D +K+D F Sbjct: 422 ELEITESVLLGNSAETVATLHKLKAQGLSIALDDFGTGYSSLSYLRSFPFDKLKIDQSFV 481 Query: 713 GDIFGTAGK--IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 D T G IVR I L R I + AEGVE+ + ++ GC +AQG+L+ +P+P Sbjct: 482 RDATATNGSKLIVRAITSLGRSLGITITAEGVETIEQLDQIRAEGCNEAQGFLFSRPVP 540 >UniRef50_C5D592 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Geobacillus RepID=C5D592_GEOSW Length = 818 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 95/290 (32%), Positives = 151/290 (52%), Gaps = 12/290 (4%) Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELF 544 P G + + K +A +R S+F+F ++ I+E I + R +R A+E GE Sbjct: 520 PQDGMDPKTLIRKADIARYKLRQKPASQFLFFEEPMARVIQEKIGMERELRRALEKGEFE 579 Query: 545 LVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGE 604 L YQP + ++T + G EAL RW E+G+ISP FI +AE G I + +I+ A Sbjct: 580 LYYQPQIQLDTGMVTGMEALIRWNHPEKGLISPYAFIPVAEQTGMIIPINEWVIRMAC-- 637 Query: 605 FRHFSQRASLKDDFL---LHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVI 661 Q L +DF + +N+SP++ F + +++E GL + L +EITE + Sbjct: 638 ----QQTKQLLNDFPNLSVSVNLSPYEFENRRFVHKLMKLLEETGLPPHHLDLEITERMT 693 Query: 662 ERINEHFYLNI-EQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG 720 I+ + I ++L+ GV IS+DDFGTG S+L ++ D +K+D F +I G Sbjct: 694 --IDTERAITILKRLKSIGVTISMDDFGTGYSSLSYLTDLPIDRLKIDRSFVRNIRGKKE 751 Query: 721 KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPF 770 I+ I L + V+AEGVE+E L C +AQGY + +P+ + Sbjct: 752 AILPSIIRLGHNIGVKVLAEGVETEAEVAYLKDKHCDEAQGYYFAQPLSY 801 >UniRef50_B6A3D2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B6A3D2_RHILW Length = 774 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 89/249 (35%), Positives = 138/249 (55%), Gaps = 12/249 (4%) Query: 523 EIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFIT 582 E+ + ++RHA+ GELFLVYQ IVD +++ G EAL RW A RG+++P FI Sbjct: 520 ELHAKRQLEHDLRHAVAKGELFLVYQRIVDTSSQEPCGYEALLRWRHASRGVLAPADFIA 579 Query: 583 IAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIM 642 AE+ G I +G +++ A S+ AS + + +N+SP Q P+ E+F+ I+ Sbjct: 580 AAEESGCIIPIGIWVLEEAC------SEAASWRTPLTIAVNISPVQFLMPNLVEQFSHIL 633 Query: 643 KENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINP 702 + GL+ + L +EITET + + QLR G+R+ +DDFGTG S+L + Sbjct: 634 AKTGLQPDRLELEITETALFHDRAAVLSTLGQLRAMGIRVVLDDFGTGYSSLANLRDFPF 693 Query: 703 DSIKVDSQFTGDIFGTAGKIVRIIF----DLARYNRIPVIAEGVESEDVARELIKLGCVQ 758 D +K+D +F I A +R +F ++A +PVIAEGVE+++ L Q Sbjct: 694 DKLKIDRRFLAGI--GADPTIRALFENVIEMASTLNLPVIAEGVETQEQLAILHASHPAQ 751 Query: 759 AQGYLYQKP 767 QG+L+ KP Sbjct: 752 MQGFLFGKP 760 >UniRef50_A7T9P7 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7T9P7_NEMVE Length = 446 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 88/249 (35%), Positives = 141/249 (56%), Gaps = 9/249 (3%) Query: 524 IEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITI 583 ++ + +A +RH +E EL LVYQP V + + I+GAEAL RW ++ II P FI+ Sbjct: 187 LQNRLHMAAQLRHCVERNELKLVYQPQVCLANKQIIGAEALVRWQHQDK-IIPPNDFIST 245 Query: 584 AEDIGFINELGYQIIKTAMGE--FRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTI 641 AE G+I +GY I++ A + H + +LK + +NVS QL +PHF ER TI Sbjct: 246 AESSGYIVPMGYWILEEACRQQVAWHNATGQALK----MAVNVSVRQLKDPHFIERLDTI 301 Query: 642 MKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEIN 701 ++ + L +E+TE+++ + + +R +G+++++DDFGTG S+L + Sbjct: 302 LQRTQIATAHLEMEVTESLVMDSSGALNQVLHSIRARGIQLAMDDFGTGYSSLSYLQHLP 361 Query: 702 PDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQA 759 + +K+D F + I ++ + + + VIAEGVE+E ELI+LGC A Sbjct: 362 INHLKIDRSFINRLLENHEGNAITALMIQIGKQLNLSVIAEGVETEAQQDELIRLGCPIA 421 Query: 760 QGYLYQKPM 768 QGYLY KP+ Sbjct: 422 QGYLYSKPL 430 >UniRef50_Q8DIH6 Tlr1612 protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DIH6_THEEB Length = 1292 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 87/255 (34%), Positives = 136/255 (53%), Gaps = 2/255 (0%) Query: 517 DDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIIS 576 D ++ E + + ++R A+ G L L+YQP+V + ++ ++G EAL RW ERG++S Sbjct: 1026 DTQMYEQVLERLHLEHDLRQALNQGGLQLLYQPVVHLQSQRLVGMEALVRWQHPERGLVS 1085 Query: 577 PLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHE 636 P FI IAED G I L + A + + Q+ S + +L +NVS L +P F + Sbjct: 1086 PAHFIPIAEDTGLIVALDQWALAQACWQLWTWRQQYSTAANLVLSVNVSAKTLQDPTFLQ 1145 Query: 637 RFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKR 696 TI + L L +E+TE + + +E LR + V ISIDDFGTG S L Sbjct: 1146 HLDTIRQRYPLPKGQLLLELTERIGIELGSEMLSLLESLRHRHVEISIDDFGTGYSCLSY 1205 Query: 697 FYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKL 754 + + +KVD F + +I+R+I L++ VIAEG+E+ + L +L Sbjct: 1206 LHSLPIQHLKVDRSFVSQLEENERNLQIIRMILLLSKQLGYRVIAEGIETPKQLQILQEL 1265 Query: 755 GCVQAQGYLYQKPMP 769 GC + QGYL+ +P+P Sbjct: 1266 GCDEGQGYLFARPLP 1280 >UniRef50_D2L6G6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L6G6_9DELT Length = 814 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 87/237 (36%), Positives = 132/237 (55%), Gaps = 1/237 (0%) Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 ++R A++ GE FL YQPI+ + R + G EAL RW +G+ SP++FI +AED G I Sbjct: 556 DLRLALKRGEFFLDYQPILALRDRRLTGFEALVRWRRPGKGVASPMEFIPVAEDTGLIVP 615 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 LG ++ A + +R + + +N+S QL +P E I++ GL +L Sbjct: 616 LGLWVLGEACQTMAAWQKRFPGAEHLSMSVNLSAKQLAQPTMVEEVERILRATGLDPRTL 675 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +EITE+VI E L +++L++ GVR+S+DDFGTG S+L D++KVD F Sbjct: 676 KLEITESVIMDNPEVSILRLKRLKELGVRLSVDDFGTGYSSLSYLQRFPIDTLKVDRAFV 735 Query: 713 GDIFGTAG-KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 DI + KIV + LA + V+AEGVE E + L C QG+L+ +P+ Sbjct: 736 SDIEASENRKIVGAVVALAHSLGLDVVAEGVELETQSDVLEGFNCEAGQGFLFSRPV 792 >UniRef50_A5ETN6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Proteobacteria RepID=A5ETN6_BRASB Length = 1047 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 134/258 (51%), Gaps = 7/258 (2%) Query: 513 FIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAER 572 F F + A E + + +++R A+ G+ L YQP++ + G EAL RW ER Sbjct: 774 FRFFEPAMDESARERLQLQQDLRRAITEGQFELHYQPLLGFRENIMTGCEALLRWRHPER 833 Query: 573 GIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEP 632 G++ PL FI +AED G INE+G +++TA E H+ D + +NVSP QL P Sbjct: 834 GMVPPLDFIPLAEDTGLINEIGDWVMRTACAEAAHWPS------DIRVAVNVSPIQLKSP 887 Query: 633 HFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLS 692 + + GL L +EITE V+ ++ + QL GVRI++DDFGTG S Sbjct: 888 TLALHVASALSAAGLAPERLEIEITEAVLIGDDDVALDILHQLHAMGVRIALDDFGTGYS 947 Query: 693 NLKRFYEINPDSIKVDSQFTGDIFG-TAGKIVRIIFDLARYNRIPVIAEGVESEDVAREL 751 +L D IK+D F DI ++ IV+ + +A + + AEGVE+ L Sbjct: 948 SLSYLKRFPFDKIKIDRCFVSDIGADSSSAIVQAVVSIAAASNMTTTAEGVETGAQQTAL 1007 Query: 752 IKLGCVQAQGYLYQKPMP 769 +LGC + QGYL+ P P Sbjct: 1008 RQLGCTEMQGYLFSAPKP 1025 >UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium extorquens group RepID=B7KTV8_METC4 Length = 772 Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 119/440 (27%), Positives = 200/440 (45%), Gaps = 30/440 (6%) Query: 348 SIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES-------NNNQYLAVGIIK 400 + + + KDAE+ ++ L +D +G + ES + LAV + Sbjct: 325 GVCSDVTATKDAEL----RIAHLAHHDALTGLPNRAFMSESLHQALRDPDRACLAVLSLD 380 Query: 401 LCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL-----CRENVQT 455 L G +AV +G + ++ + +R+ + + + F D +++L V+ Sbjct: 381 LDGFKAVNDRYGHPGGDALLTSVAERLQNEVSGGDIVARFGGDEFVVLNVAFTSPSEVED 440 Query: 456 FTRKIAMVNDFDSSFGYRN----LRIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFS 511 R+ ++ + N + + P G A + A+ + Sbjct: 441 LARR--LIESLSTPVPLDNESVTIGVSIGIAFAPTDGRTAEELLKNADAALYRAKTAGRG 498 Query: 512 EFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAE 571 F F + +++ + +++R+A+ EL L YQP V T I G EAL RW E Sbjct: 499 TFRFFEPEMDRKLQARQRLVQDLRNALTRDELRLDYQPFVKSETGVISGCEALLRWRHPE 558 Query: 572 RGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNE 631 RG+ISP++FI +AE+ G I +G +I+ A E AS + + +NVSP Q Sbjct: 559 RGMISPVEFIPLAEESGLIVPIGMWVIQQACREA------ASWPSTYRISVNVSPVQFRS 612 Query: 632 PHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGL 691 + + +GL L VE+TE V+ + + Q+R GVR+++DDFGTG Sbjct: 613 RDLPQVILAALTSSGLAPARLEVEVTEAVLIDDADTALEILRQIRSLGVRVALDDFGTGY 672 Query: 692 SNLKRFYEINPDSIKVDSQFTG--DIFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVAR 749 S+L D IK+D F D + IV+ I D+A+ + V AEGVE++D A+ Sbjct: 673 SSLSYLRRFPFDKIKIDRSFVQELDTRHDSQVIVQAIRDMAQGLGMTVTAEGVETDDQAK 732 Query: 750 ELIKLGCVQAQGYLYQKPMP 769 L + GC + QG+LY +P P Sbjct: 733 RLRQTGCEELQGFLYSRPRP 752 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 85/240 (35%), Positives = 138/240 (57%), Gaps = 4/240 (1%) Query: 534 IRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINEL 593 + HA+E +L L YQ V+ + + + GAE L RW G+ISP +FI +AE+ G I + Sbjct: 885 LHHALEQQQLMLYYQVQVNADYQPV-GAEVLLRWFHPVLGMISPAQFIPLAEESGMIIPI 943 Query: 594 GYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLC 653 GY +++ A + + ++ K D +L +NVS Q +E F ++ ++ ++G+ + L Sbjct: 944 GYWVLEQACDQLKRWASDV-FKCDLVLAVNVSIRQFHEADFAQKVQALVTDSGISPDRLK 1002 Query: 654 VEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTG 713 +EITE+++ E+ ++QL+K G+ S+DDFGTG S+L + D +K+D F Sbjct: 1003 LEITESMLVHDVENIIATMQQLKKIGLNFSMDDFGTGYSSLSSIKRLPLDQLKIDQSFVR 1062 Query: 714 DIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFS 771 DI IVR I +A+ ++ +IAEG+E+E R L GC QGYL+ KP+P S Sbjct: 1063 DIGHDEHDKAIVRTIIAMAQSMKLNIIAEGIETEQQRRLLALKGCTNYQGYLFSKPVPLS 1122 >UniRef50_C5RNC8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Clostridium cellulovorans 743B RepID=C5RNC8_CLOCL Length = 584 Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 117/396 (29%), Positives = 205/396 (51%), Gaps = 28/396 (7%) Query: 391 NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC- 449 ++ A+ I+ + + V ++G +++++++ RI + + I D + +L Sbjct: 188 DETFALVIVDIRRFKKVNDIYGARFGDELLKQVANRIQDYIDESAIIAHLGEDHFGVLLE 247 Query: 450 ----RENVQTFTRKI--AMVNDFDSSFGYRNLRIHKS---AICEPLQG--ENAWSYAEKL 498 R+ V+ +I A+ +F S L I+ S +I E + G ++ + AEK Sbjct: 248 NIKKRQEVEMIVDRINDALTKNF--SIAGEELTINCSMGISIFEEVMGNKKDLLTNAEK- 304 Query: 499 KLAISSIRDHMFSEFIFCDD--AKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 A+ +D + I+ + AK+N + ++ A+E G+ FLVYQP V +NT Sbjct: 305 --ALIEAKDKGLEKVIYTKELSAKVNR---RTILENDLMTAIEKGQFFLVYQPQVSLNTG 359 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 ++G EAL RW + G+ISP +FI I E+ G I+ +G +I+T+ + + + R Sbjct: 360 KMVGVEALIRWSHPKLGLISPFEFIPIVEESGLIDSIGEWVIRTSCIQAKEW--RDKKLP 417 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 F + +N+S QL + + + I+KE L N L VE+TE+ + E N +L Sbjct: 418 FFKVAVNISSIQLKKMNICKIIKDILKELSLDPNVLEVELTESAMMEDIELAIENFRELN 477 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT---GDIFGTAGKIVRIIFDLARYN 733 G++I+IDDFGTG S+L + + D +K+D F GD F + I + I D+A+ Sbjct: 478 NMGIKIAIDDFGTGYSSLNYLRKFSIDKLKIDRSFVTELGDDFEST-IITKTIIDMAKNL 536 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 VIAEGVE+++ + L++ GC + QGY + KP+ Sbjct: 537 SFKVIAEGVETKEHLKYLMENGCDEVQGYYFSKPIT 572 >UniRef50_A5VAG3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VAG3_SPHWW Length = 547 Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 134/256 (52%), Gaps = 20/256 (7%) Query: 522 NEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFI 581 NEIE +R + G + ++P VD+ T A+ G E L RW + GII P FI Sbjct: 273 NEIE------LGLRAGIPSGRIVPWFEPQVDLATGALTGFELLARWDHPDHGIIEPAAFI 326 Query: 582 TIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTI 641 +AE+ G I EL +++ + E RH+ LL +N+SP Q+ +P ++ + Sbjct: 327 PVAEEAGLIGELSMSVMRAGIEEARHWDP------SLLLSVNISPSQMRDPWLAQKIVKL 380 Query: 642 MKENGLKANSLCVEITETVIERINEHFYLN---IEQLRKQGVRISIDDFGTGLSNLKRFY 698 + E A L VEITE + E+ L + L+ Q +R+++DDFGTG S+L Sbjct: 381 LTETSFPAERLEVEITEAA---LFENLGLAASIVASLKNQRIRVALDDFGTGYSSLTHLR 437 Query: 699 EINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGC 756 + D IK+D F + A +VR+I LA+ +PV+AEGVE+ ++A L +GC Sbjct: 438 TLPLDRIKIDRSFVLRMTEDAEAAALVRLIVSLAQGLDVPVLAEGVETGEIAAMLTAIGC 497 Query: 757 VQAQGYLYQKPMPFSA 772 AQG+ + +P P A Sbjct: 498 TMAQGWHFGRPAPARA 513 >UniRef50_Q2BL49 Sensory box/GGDEF domain/EAL domain protein n=2 Tax=cellular organisms RepID=Q2BL49_9GAMM Length = 1014 Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 121/455 (26%), Positives = 213/455 (46%), Gaps = 28/455 (6%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGF---------IKNM 383 I AL + + +++ + I+E+K+AE KL L YD + I++ Sbjct: 556 ISALSSTKTEQSSYVAVFSDISELKEAE----QKLEKLAHYDNLTSLPNRTLFYDRIESS 611 Query: 384 AIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + N + A+ + + + V G ++++ + +RI+ + D Sbjct: 612 LARAARNGKKTALLFVDIDRFKQVNDNHGHHTGDQLLVEAARRISAHIRLGDTVARLGGD 671 Query: 444 LYLLLCRE-----NVQTFTRKIAMVNDFDSSFGYRNLRIHKSA----ICEPLQGENAWSY 494 + ++ E VQ R+I F + I SA P G NA S Sbjct: 672 EFTVILSELDGLDPVQDIARRIQ--KSLRDPFRLDDKEIFSSASIGIAMYPDDGRNAESL 729 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 + +A+ +++ ++ +F D A + E + N++ A+ +LF+VYQP +I+ Sbjct: 730 LKHADVAMYHVKERGRNDILFFDKAINEQAEARAQLEDNLKTAINTQQLFMVYQPRFNIS 789 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 IL AEAL RW E+G ISP FI +AE G I ELG ++ A + +++ Sbjct: 790 GTEILSAEALIRWKHPEQGFISPGDFIPLAESCGLIVELGRWVLMQACQAAQEWNENTG- 848 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 + + +N+S QL++ + + GL + L +EITET++ + E +E Sbjct: 849 -QNTPVSVNLSARQLHDSSLLIDIENALNQTGLDPSLLELEITETMVIQDMETVISRLEA 907 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARY 732 +R GVR+S+DDFGTG S+L + ++K+D F D+ G++G +V+ + ++ Sbjct: 908 IRTIGVRLSVDDFGTGYSSLIYLKRLPVSTVKIDKSFIDDVPGSSGSENLVKAVISMSHS 967 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKP 767 + V+AEGVE+E L + C + QGYL KP Sbjct: 968 LALNVVAEGVETEAQLSFLTENHCDEIQGYLLAKP 1002 >UniRef50_Q07T95 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07T95_RHOP5 Length = 812 Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 87/247 (35%), Positives = 138/247 (55%), Gaps = 4/247 (1%) Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 ++R + + L +Q +D+ R ++GAEAL RW RG + P +FI IAE G I Sbjct: 549 DLRDDLRVRNFELHFQAQIDVAGR-LVGAEALIRWPHKRRGYVPPDQFIGIAETTGLILP 607 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 +G +I+ A + +S R L + L INVS QL++ F + ++ G N L Sbjct: 608 IGNWVIEEACNRLKQWSARPGLAN-LSLAINVSAVQLHDEQFVDHLVATLERTGADPNLL 666 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +E+TE+V+ N+ + +LR++GVR S+DDFGTG S+L ++ + +K+D F Sbjct: 667 KLELTESVLIDCNDDVIERMNRLREKGVRFSLDDFGTGYSSLLYLRKLPIEQLKIDRSFV 726 Query: 713 GDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPF 770 DI A I ++I L + + V+AEGVE+E RELI++GC QGYL +P+P Sbjct: 727 RDILVDANDAAIAKMIIALGKTLGLDVLAEGVETEGQLRELIEMGCDAYQGYLISRPVPV 786 Query: 771 SAWDKSG 777 S +++ Sbjct: 787 SEFERQA 793 >UniRef50_D0J4K1 Diguanylate cyclase/phosphodiesterase with n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J4K1_COMTE Length = 822 Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 92/257 (35%), Positives = 149/257 (57%), Gaps = 14/257 (5%) Query: 522 NEIEENIW----IARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISP 577 EIE ++ + R++R A+ G+ + YQP +D+ ++ ++GAEAL RW + +ISP Sbjct: 558 QEIEHTLYARHMLERHMRVAVAEGDFEVHYQPKIDLASQQVVGAEALVRWRRQDGSLISP 617 Query: 578 LKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHI--NVSPWQLNEPHFH 635 +FI +AE+ G I LG ++ A E R + ++ +L+HI NVS QL + +F Sbjct: 618 AQFIPLAEETGLIVPLGRSVLLKACQEGRRWHEQG-----YLIHIAVNVSAVQLAKSNFT 672 Query: 636 ERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLK 695 + I+++ G+ L +EITE V+ + ++ + I +L K GV ISIDDFGTG S+L Sbjct: 673 AMVSEIIEQTGIMPGYLELEITEGVLAKDVKNTFAIINELHKIGVSISIDDFGTGYSSLS 732 Query: 696 RFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIK 753 + D +K+D FT +I ++ IV I ++A + ++AEGVE++ A L + Sbjct: 733 YLKQFPIDVLKIDQSFTREILTEKSSAAIVAAIINMAHGLDLRLVAEGVETQAQAELLQQ 792 Query: 754 LGCVQAQGYLYQKP-MP 769 +GC QGYLY +P MP Sbjct: 793 MGCTVMQGYLYSRPLMP 809 >UniRef50_A6QAC1 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAC1_SULNB Length = 776 Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 124/466 (26%), Positives = 206/466 (44%), Gaps = 45/466 (9%) Query: 340 EGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGF---------IKNMAIIESNN 390 EGD I+I N I E+ K+L YD + ++N+A ++ + Sbjct: 315 EGDITGGIAIVNDITN----EVTAQEKMLRNAYYDMLTNIPNRTLLMDKLQNLAEVKKST 370 Query: 391 NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL-- 448 Y A+ + + + + FG D +K+++++ RI E + D +++L Sbjct: 371 KNYGALLFLDIDNFKKINTTFGQDIGDKVIKQVAHRIEEFIGSHETLARVAGDKFVILIP 430 Query: 449 ---CRENV-------------QTFTRKIAMVN-DFDSSFGYRNLRIHKSAICEPLQGENA 491 EN Q FTR I +V D SF AI A Sbjct: 431 NIGMDENTAKDATTEYVEKFNQHFTRPIKVVGKDHHVSFSI-------GAILFADTEATA 483 Query: 492 WSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIV 551 + ++ + A+ + F D+ ++EE + + +I A++ E + YQP + Sbjct: 484 FDLLKRAETAMYEAKKSTRGSMKFYQDSMSTQVEEQLMLENDIHRAIKDDEFEMYYQPQL 543 Query: 552 DINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQR 611 + T I+GAEAL RW E+G++ P FI +AE+ G I +L I + + ++ Sbjct: 544 KVKTNEIIGAEALIRWHHPEKGLVLPDAFIQLAEESGIIIKLEEWIFDRIFKDVKEMNRD 603 Query: 612 ASLKDDFLLH---INVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHF 668 F LH IN+S EPHF E+ ++KE+ +K +EITE+ I R + Sbjct: 604 MG---GFSLHHISINISTVHFLEPHFVEKIMLLVKEHKVKPEWFELEITESGIIRNIDDA 660 Query: 669 YLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFD 728 I +L+ G SIDDFGTG S+L E+ D IK+D F ++ IV + Sbjct: 661 IRKIRELKGFGFAFSIDDFGTGYSSLSHLKELPVDVIKIDQSFIRNMNQDDEMIVEAVVA 720 Query: 729 LARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 + + + ++AEGVE+ D + L + C QGYL +P ++ Sbjct: 721 IGQKFHLGIVAEGVENNDTLKYLQHVDCDTYQGYLASMAVPLKDFE 766 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 102/319 (31%), Positives = 165/319 (51%), Gaps = 8/319 (2%) Query: 462 MVNDFDSSFGYRNLRIH-KSAICEPLQGENAWSYAEKLK---LAISSIRDHMFSEFIFCD 517 ++N F + ++ H S++ L G+N E LK +A+ + + F D Sbjct: 931 ILNKFIEPYQFKGYEYHITSSVGITLFGKNNLKSDELLKQADIAMYQAKKLGRNALSFFD 990 Query: 518 DAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISP 577 I+ + + +R A++ E L YQ V ++ RA+ GAEAL RW+ ERG+I P Sbjct: 991 PKMQEGIQARVDMEHELRKALDKNEFQLFYQMQVGLSDRAV-GAEALIRWIHPERGLIPP 1049 Query: 578 LKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHER 637 +F++IAED G I +G +I TA + + + Q + L +NVS Q + F E+ Sbjct: 1050 NEFVSIAEDCGMILSIGAWVIDTACAQLKRWEQSERTRS-LTLSVNVSAKQFRQADFVEQ 1108 Query: 638 FTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRF 697 TT + +G+ L +E+TE+ + E + L+ G+R S+DDFGTG S+L+ Sbjct: 1109 VTTAIARHGINPMLLKLELTESALLDHIEDAVAIMNALKDIGIRFSLDDFGTGYSSLQYL 1168 Query: 698 YEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLG 755 + +K+D F DI + G IVR I +A + VIAEGVE++ L+ G Sbjct: 1169 RLLPLYQLKIDRSFVRDIASSIGNQAIVRTIIAMAHTLNLNVIAEGVETQVQQGILLDSG 1228 Query: 756 CVQAQGYLYQKPMPFSAWD 774 C+ QGYL+ +P+P A++ Sbjct: 1229 CMHYQGYLFSEPVPIDAFE 1247 >UniRef50_B1M2I6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2I6_METRJ Length = 819 Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 102/313 (32%), Positives = 157/313 (50%), Gaps = 14/313 (4%) Query: 466 FDSSF---GYR-NLRIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKL 521 FDS F G+R + + P G +A + LA+ + + A Sbjct: 487 FDSPFSVGGHRVGVGLSVGIALAPEHGTDAEPLYRRADLALYRAKAEGRGTYRIFTPAMD 546 Query: 522 NEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFI 581 E EE + R++R A++ L L YQP VD +T A++G EAL RW RG +SP F+ Sbjct: 547 EEAEERRVLERDLRQALDDNTLGLHYQPQVDGHTGALVGFEALLRWTHPVRGSVSPNLFV 606 Query: 582 TIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTI 641 +AE+ G I LG +++ A E ++Q LK + +N+SP Q +P E I Sbjct: 607 PLAEETGLIVALGDWVLREACREAAQWAQ--PLK----VAVNLSPRQFQKPDLPETVLAI 660 Query: 642 MKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEIN 701 + E GL + L +E+TE++I + +L+ G+RIS+DDFGTG ++L Sbjct: 661 LAETGLSPDRLELEVTESIIINDMARAVGILRRLKSYGIRISMDDFGTGYASLATLQAFP 720 Query: 702 PDSIKVDSQFTGDIFGT---AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQ 758 D +K+D F + GT A IVR + L R + V+AEGVE+ + L + C + Sbjct: 721 FDKLKIDRSFVAQL-GTGPQAAVIVRAVLSLGRSLGMGVVAEGVETHAQMKFLTEEACGE 779 Query: 759 AQGYLYQKPMPFS 771 QGYL+ +P P + Sbjct: 780 MQGYLFGRPRPIT 792 >UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W545_9CYAN Length = 709 Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 85/238 (35%), Positives = 132/238 (55%), Gaps = 2/238 (0%) Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 ++R A+E E + YQPI + T + G EAL RW E G++SP +FI +AED G I Sbjct: 457 DLRRALERQEFEVYYQPITSLVTGMLTGFEALVRWRHPELGLVSPAEFIPVAEDTGLIIP 516 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 LG ++ A + R + + + + +N+S Q+ EP E+ I+ E GL + L Sbjct: 517 LGEWVLHEACRQLRMWHTQFPTPEPLKMSVNLSGKQIKEPDLIEQIDHILAETGLDGSFL 576 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +EITE+++ E + QLR + +++S+DDFGTG S+L + +++K+D F Sbjct: 577 KLEITESILMENAETVTKMLLQLRARNIQLSVDDFGTGYSSLSYLHRFPVNTLKIDRSFV 636 Query: 713 GDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 + +I+R I LA R+ VIAEGVE+ + EL L C Q QGYL+ KP+ Sbjct: 637 SKMNPKNRNTEIIRTIITLAHSLRMDVIAEGVETLEQLTELKLLNCEQGQGYLFSKPL 694 >UniRef50_B6A2R7 Diguanylate cyclase/phosphodiesterase n=10 Tax=Rhizobium RepID=B6A2R7_RHILW Length = 788 Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 89/238 (37%), Positives = 131/238 (55%), Gaps = 15/238 (6%) Query: 539 EIGELFLVYQPIVDINTR-AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQI 597 + G L + YQ + + A GAEAL RW ++RG+++P FI +AE+ G I+ LG+ + Sbjct: 536 DFGSLEVYYQTVHRADGGYAASGAEALVRWRHSQRGLLTPASFIPVAEEGGLIDALGFWV 595 Query: 598 IKTAMGEFRHFSQRASLK--DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVE 655 ++ A RA+ K DD + +NVSP QL P+F E +++E+GL + L +E Sbjct: 596 LREAC--------RAACKWPDDTFVAVNVSPAQLRRPNFAEEVFAVLEESGLPPSRLELE 647 Query: 656 ITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI 715 +TE+ + N Y ++ LR +GV+IS+DDFGTG S L + D IK+D F + Sbjct: 648 LTESSLIEDNSDVYSVLKSLRSRGVQISLDDFGTGFSCLSHLMRFDIDRIKIDRSFV-SL 706 Query: 716 FGT---AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPF 770 GT I+ I L+R I AEGVE+E L LGC QGY + KP+P Sbjct: 707 LGTKANGAAIIGAIVALSRNLGISTTAEGVETEYQRDFLAALGCTDLQGYFFSKPVPL 764 >UniRef50_A2SL43 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SL43_METPP Length = 684 Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 77/248 (31%), Positives = 135/248 (54%), Gaps = 8/248 (3%) Query: 524 IEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITI 583 + E + + +R + GE +QPIV++N++ + E L RW +RG++ P +FI + Sbjct: 427 VAERAALEQAMRDGLTRGEFVAYFQPIVELNSQRVQSVELLARWQHPQRGLLPPAQFIAL 486 Query: 584 AEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMK 643 AED G I L +++ A F++ +L + + +NV+P Q+ + + ++ Sbjct: 487 AEDAGLIGALMLSVLRNA------FAELPALPAHWRVSVNVAPQQIQDETLVPQLLALLA 540 Query: 644 ENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPD 703 E+G+ L VE+TET + R + L+ G +++DDFGTG S+L E++ D Sbjct: 541 EHGVPPARLDVELTETALVRDTSAARRVMRDLKLAGFTVTLDDFGTGHSSLAYLAELDFD 600 Query: 704 SIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQG 761 IK+D F + + K+V I L+R +P +AEG+E+E A L+++GC QG Sbjct: 601 KIKIDRSFVHTLRERPQSAKVVDAIIGLSRSLGVPAVAEGIETEADATRLLRMGCALGQG 660 Query: 762 YLYQKPMP 769 YL+ +P+P Sbjct: 661 YLFGRPVP 668 >UniRef50_Q7NSJ7 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NSJ7_CHRVO Length = 662 Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 88/264 (33%), Positives = 140/264 (53%), Gaps = 4/264 (1%) Query: 500 LAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAIL 559 LA+ + +D + +F A + + + +IR ++ GE +QP VDI + ++ Sbjct: 388 LAMYAAKDAGRNNLMFFTPALEARSQAQLALENDIRRGLDCGEFIAYFQPRVDIASGRVV 447 Query: 560 GAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFL 619 GAEAL RW +RG++ P FI + ED G + ELG QI+ A + R + R D L Sbjct: 448 GAEALARWRHPQRGLLMPDSFIPMCEDCGMVMELGRQILLQAARQQRQWRDRGL---DLL 504 Query: 620 LHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQG 679 + +N+S Q +P + I+ ++G + + L +EITE+V+ +E ++ +R G Sbjct: 505 VSVNLSACQFVDPGLPGQVEQILADSGCQPDRLELEITESVLLGHDEQTMSTLQAMRALG 564 Query: 680 VRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIA 739 VRI++DDFGTG SNL S+K+D F D+ I +I L R + ++A Sbjct: 565 VRIAVDDFGTGYSNLAYLQRYPLTSLKIDRSFIADLDDKPA-IAELITTLCRMMGLNMVA 623 Query: 740 EGVESEDVARELIKLGCVQAQGYL 763 EGVE+E L + GC + QGYL Sbjct: 624 EGVETEAQLAWLAERGCQEYQGYL 647 >UniRef50_Q1GPI8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sphingopyxis alaskensis RepID=Q1GPI8_SPHAL Length = 543 Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 88/239 (36%), Positives = 127/239 (53%), Gaps = 8/239 (3%) Query: 530 IARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGF 589 I IR M GE ++P VDI + ++G E L RW S E G+I P +FI +AE G Sbjct: 272 IETGIREGMPRGEFVPHFEPQVDIASGRLVGFEMLMRWESPEHGLIPPERFIPVAEASGL 331 Query: 590 INELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKA 649 I EL ++I+ AM + + +L +N+SP QL +P F ++ T ++ E G A Sbjct: 332 IGELSLRVIRDAMDIAKRWDP------SIILAVNISPQQLKDPWFSQKLTKLLVETGFPA 385 Query: 650 NSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDS 709 L VEITE+ + + L+ QGV +S+DDFGTG S+L + D IK+D Sbjct: 386 AQLEVEITESSLFENLPLVRSIVTSLKNQGVSLSLDDFGTGYSSLSHLRALPFDRIKIDR 445 Query: 710 QFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQK 766 F + G+ A IV I L +P+ AEGVE E A EL +LGC + QG+ + + Sbjct: 446 SFVTAMRGSPDAQAIVLAIVRLGESLAMPITAEGVEDEATAIELTRLGCAKGQGWHFGR 504 >UniRef50_B7L1R8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=7 Tax=Rhizobiales RepID=B7L1R8_METC4 Length = 795 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 92/255 (36%), Positives = 134/255 (52%), Gaps = 8/255 (3%) Query: 523 EIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFIT 582 E+ E + ++RHA+ GE+ LVYQP D+ T A++G EAL RW ERG +SP FI Sbjct: 531 EVRERRVLEHDLRHAVARGEMHLVYQPQTDVGTGAVIGFEALLRWKHPERGYVSPAVFIP 590 Query: 583 IAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIM 642 IAE+ I ++G +++ A E + Q + +NVS Q++ HF ++ Sbjct: 591 IAEESDVILQIGEWVLREACREAATWPQ------PLTIAVNVSAVQIHSTHFVGLVHEVL 644 Query: 643 KENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINP 702 GL + L VE+TET + L + QL+ G+RI++DDFGTG S+L Sbjct: 645 LRTGLAPHRLEVEVTETALISDPNRALLTLRQLKALGLRIAMDDFGTGYSSLSNLRSFPF 704 Query: 703 DSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQ 760 D IK+D F + IVR + L R +PV+AEGVE+E LI C AQ Sbjct: 705 DKIKIDGSFVRSVDSNEQTAAIVRSVLGLGRGLGLPVLAEGVETEAELGFLIAEQCHAAQ 764 Query: 761 GYLYQKPMPFSAWDK 775 GYL +P P + + + Sbjct: 765 GYLMGRPSPIAQFTQ 779 >UniRef50_B2JE89 Diguanylate cyclase/phosphodiesterase n=58 Tax=Burkholderia RepID=B2JE89_BURP8 Length = 791 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 114/426 (26%), Positives = 205/426 (48%), Gaps = 19/426 (4%) Query: 361 IERSNKLLSLISYDQESGFIKNMAIIESNNNQ--------YLAVGIIKLCGLEAVEAVFG 412 + R ++ L+ +D +G + ++S ++ +LA+ I L + V G Sbjct: 325 LGREREMTHLVEFDLLTGLRNRYSTLQSLRHEVGQPVNVGHLAILFIDLDNFKTVNDTLG 384 Query: 413 VDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCREN---VQTFTRKIAMVNDFDSS 469 + + +++ R+A+ A + D ++++ + + + T A+++ F Sbjct: 385 HNAGDIVLQMTASRLADAVADAGALSRIGGDEFVVVIKGDDVEKRAVTLAEAIIDVFAKP 444 Query: 470 FGYR--NLRIHKSA--ICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIE 525 F R + +H S + E+ +K LA+ S +D + + F + + Sbjct: 445 FEVRGSSFVLHASIGIALYSVANESEIDLLKKADLAMYSAKDAGKNCYQFYSPHLSHRAD 504 Query: 526 ENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAE 585 + + +R A+ +LFL YQP +D+ R I G EAL RW + G+I +FI +AE Sbjct: 505 HLMKWEQQLRVALADQQLFLAYQPKIDLARRCITGFEALVRWNHPQHGLIPANEFIPVAE 564 Query: 586 DIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKEN 645 G I +G +I+TA + + Q+ D L +N+S Q +E + ++E Sbjct: 565 STGLIVPIGDFVIRTACRQLAQWQQQG--YDTLSLAVNISAVQFWRGDLYETISHAIEET 622 Query: 646 GLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSI 705 G+ A L +EITET + + I L++ GVRI++DDFGTG S+L + D++ Sbjct: 623 GIAARRLELEITETAMMEYPDLVSEKIFALKRLGVRIALDDFGTGYSSLSYLNRFSVDTL 682 Query: 706 KVDSQFTGDIFG--TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYL 763 KVD F I G + +V I +LAR + V+ EG E+E+ L LG ++AQG+L Sbjct: 683 KVDRSFVQAIPGDRSVCVMVTAIVNLARSLGLTVVVEGTETEEQIAWLAALGHIEAQGFL 742 Query: 764 YQKPMP 769 + +P+P Sbjct: 743 FSRPVP 748 >UniRef50_B4B330 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B330_9CHRO Length = 1188 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 86/239 (35%), Positives = 140/239 (58%), Gaps = 4/239 (1%) Query: 534 IRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINEL 593 +R A+E+ E L YQPIV ++T + G EAL RW ++G+ISP++FI IAE+ G I + Sbjct: 936 LRQAIELKEFLLYYQPIVSLSTGYLTGFEALIRWQHPKKGLISPVEFIPIAEETGLIVPM 995 Query: 594 GYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLC 653 G I + A + + + ++ +LK+ + +N+S QL H E I+ + G+ +SL Sbjct: 996 GKWITQQACRQLKLWQEQYNLKNPLQISVNLSSKQLRNSHLIEEIDEILAQTGIDPSSLK 1055 Query: 654 VEITETVI-ERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +EITE+++ E ++ + IE LRK+ + + +DDFGTG S+L + ++K+D F Sbjct: 1056 LEITESMLMENVDIAMNILIE-LRKRNIELCLDDFGTGYSSLSYLHRFPVTTVKIDRSFV 1114 Query: 713 GDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 + + +IV I LA + V AEGVE++ ++L L C QAQGY + KP+P Sbjct: 1115 MQMQPGNSNAEIVHAIITLAHSLEMTVTAEGVETQLQLQQLQWLECEQAQGYFFSKPLP 1173 >UniRef50_B8H975 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=4 Tax=Arthrobacter RepID=B8H975_ARTCA Length = 513 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 83/242 (34%), Positives = 134/242 (55%), Gaps = 2/242 (0%) Query: 530 IARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGF 589 + ++R A+ L L YQP+VD+ + + G EAL RW RG I P +FI +AE+ G Sbjct: 253 LVEDLRAAIRNDGLMLYYQPVVDLVSGRLEGVEALVRWNHPTRGFIMPDEFIPLAEEAGL 312 Query: 590 INELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKA 649 I+ELG +++TA+ + R + + + DF + IN+S L F E ++++ G+K Sbjct: 313 ISELGNWVLRTAVQQLRAWIDDSLVDGDFSVRINISATDLQSLQFIEDVRNVLRDTGVKP 372 Query: 650 NSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDS 709 + + +E+TE I + NE ++ LR GV I IDDFGTG S++ + D +KVD Sbjct: 373 DQVVLELTEVAIVKGNELDRYSLAGLRGLGVGIEIDDFGTGYSSISYLRRLPVDRVKVDR 432 Query: 710 QFTGDIFGTAGK--IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKP 767 + G+ +V + L R + + EGVE+ + A L +LGC+ AQGY + +P Sbjct: 433 SLISGLGTDPGQPALVAAVLQLVRACGLEAVWEGVETAEQADILRELGCLSAQGYYFSRP 492 Query: 768 MP 769 +P Sbjct: 493 VP 494 >UniRef50_Q3A5U6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5U6_PELCD Length = 628 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 98/291 (33%), Positives = 154/291 (52%), Gaps = 14/291 (4%) Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELF 544 P G++A + + +A+ ++ + F ++ E + + I +RHA++ EL Sbjct: 314 PNDGKDAETLMKCADMAMYFAKNREPENYRFYQESMNTEALKRLAIETQLRHALQRQELS 373 Query: 545 LVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGE 604 LVYQP D+NT A+ G EAL RW + E G I P +FI IAE+ G I +LG+ ++ TA + Sbjct: 374 LVYQPQFDLNTGAVSGLEALLRWDNQELGQIPPKEFILIAEETGIIYDLGHWVMCTACNQ 433 Query: 605 FRHFSQRASLKDDFLL---HINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVI 661 + + D L +NVSP + P F T + E+GL+ L +EITET++ Sbjct: 434 VKTWHNM-----DIELPRISVNVSPKEFIHPDFLSNVKTALDESGLEPGGLQIEITETLL 488 Query: 662 ERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG- 720 E +E+L + GV+I+IDDFG G S+L R + + D +K+D F I + G Sbjct: 489 MEHYEGTAKILEELSRMGVQIAIDDFGKGYSSLNRLHTLTIDCLKIDRSFVNGI--SVGF 546 Query: 721 ---KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 +++ I +A + VIAEGVE+E+ L C +AQGY P+ Sbjct: 547 KEQSVIKAIISMASAMNLKVIAEGVETENQFTFLKDKHCQEAQGYRLSLPL 597 >UniRef50_B0C9M5 Diguanylate cyclase/phosphodiesterase with response regulator, putative n=6 Tax=Cyanobacteria RepID=B0C9M5_ACAM1 Length = 636 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 86/248 (34%), Positives = 136/248 (54%), Gaps = 2/248 (0%) Query: 523 EIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFIT 582 +++ ++ + ++R A+E E L YQPIV ++T I G EAL RW+S E G +SP KFI Sbjct: 372 DVQSSLQLETDLRRAIERQEFILNYQPIVALDTGMITGFEALVRWISPELGFVSPGKFIP 431 Query: 583 IAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIM 642 +AED G I LG +++ A + + + +N+S Q ++P+ E I+ Sbjct: 432 LAEDTGLIIPLGEWVLREACRQLNEWQSNNVTDIPLTMSVNLSVKQFSQPNLIETIDQIL 491 Query: 643 KENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINP 702 E L L +EITE+ I ++ ++QLR + + +SIDDFGTG S+L + Sbjct: 492 AETQLPTQCLKLEITESAIMENSDSAAKILDQLRDRQIHLSIDDFGTGYSSLSYLHRFPV 551 Query: 703 DSIKVDSQFTG--DIFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQ 760 +++KVD F D IV+ I LA+ + V+AEG+E+ + +L LGC Q Sbjct: 552 NTLKVDRSFVCRLDAADDNVAIVQAIVTLAQTMGMDVVAEGIETTEQQHQLENLGCEYGQ 611 Query: 761 GYLYQKPM 768 GYL+ KP+ Sbjct: 612 GYLFCKPV 619 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 111/394 (28%), Positives = 181/394 (45%), Gaps = 29/394 (7%) Query: 410 VFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR---ENVQTFTRKIAMVND- 465 G D ++++ ++ R+ + F D ++++ +++T T + MV D Sbjct: 468 TLGHDMGDQLLAQVATRLVASVRAADTVARFGGDEFVVMLEALAPDLRTATAQAEMVADK 527 Query: 466 ----------FDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLK---LAISSIRDHMFSE 512 D Y L I + L GE S E LK LA+ + + Sbjct: 528 LLASLNQPFALDGGQHYSTLSIGVT-----LFGEQRLSVDELLKRADLALYQAKAAGRNT 582 Query: 513 FIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAER 572 F D + + ++R + EL + YQP+VD R ++GAEAL RW +R Sbjct: 583 QRFFDPDMQAAVNARSNLEADLRQGLARAELLVYYQPVVDHQAR-LMGAEALVRWRHPQR 641 Query: 573 GIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEP 632 G+I P FI +AE G I LG +++TA + + +SQ + +NVS Q +P Sbjct: 642 GMIGPADFIPLAEQTGLILPLGQYVLQTACAQLQRWSQHPDTAG-LSISVNVSARQFRQP 700 Query: 633 HFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLS 692 F + +K +G L +E+TE+++ E + QL+ +GV ++DDFGTG S Sbjct: 701 GFVAQVLHQLKSHGADPRRLKLELTESLLLGDIEDTIARMAQLKSEGVGFALDDFGTGYS 760 Query: 693 NLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARE 750 +L + D IK+D F ++ IVR I LA+ + V+AEGVE+ Sbjct: 761 SLSYLKRLPLDQIKIDQSFVREVLADPNDAAIVRTILALAKSLDLQVVAEGVETTGQLSF 820 Query: 751 LIKLGCVQAQGYLYQKPMP---FSAWDKSGKLVK 781 L GC QGYL+ +P+P F+ + GK+ + Sbjct: 821 LQLHGCEGFQGYLFGRPVPMEVFACAHRPGKMPQ 854 >UniRef50_C6X941 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X941_METSD Length = 738 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 89/287 (31%), Positives = 157/287 (54%), Gaps = 4/287 (1%) Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELF 544 P G++ + ++ +A+ ++ + F + D + + + + + +R A+E ++ Sbjct: 426 PDHGDSIENLIKRADIAMYHVKWRGKNGFQYYDPSMNSMFHKKLSLENELRRAIEKRQIV 485 Query: 545 LVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGE 604 L YQP + ++ ++G EAL RW E G++SPL+FI +AE+ G I+ LG +++ A + Sbjct: 486 LYYQPKIHLDGHCVIGLEALARWHHPELGLVSPLEFIPLAEETGLIHALGEMLLEEACVQ 545 Query: 605 FRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERI 664 R + Q A L ++F L IN+SP + E F R T ++ + L + +EITE ++ R Sbjct: 546 MRQW-QDAGL-NNFSLAINISPQLVEEDAFVSRILTPIRHHQLSEDLFEIEITENLLMRD 603 Query: 665 NEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKI 722 E +++L G++I++DDFGT S+L S+K+D F DI T+ I Sbjct: 604 VESSISKLKELGSHGIKIALDDFGTCYSSLAYLRRFPIHSVKIDKSFVSDISSTSENASI 663 Query: 723 VRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 + I +A ++ +IAEGVE+ L LGC + QG+L+ KP+P Sbjct: 664 ISAIAGIANGFKLDLIAEGVETIPQMHTLQSLGCTKMQGFLFSKPLP 710 >UniRef50_B9YZY8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YZY8_9NEIS Length = 718 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 87/250 (34%), Positives = 130/250 (52%), Gaps = 6/250 (2%) Query: 526 ENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAE 585 E + + ++R AM G+L + YQPIVD+ T I+ AEAL RW RG ISP +FI IAE Sbjct: 456 ERLQLGHDLRSAMAQGQLDVYYQPIVDLATGHIVKAEALVRWHHPRRGWISPAQFIPIAE 515 Query: 586 DIGFINELGYQIIKTAMGEFRHFSQRA----SLKDDFLLHINVSPWQLNEPHFHERFTTI 641 DIG IN +G + + A G + + + IN SP Q H HE + Sbjct: 516 DIGLINGIGDWVFRRAAGMAKRLWESGCSGTPAGAPLQISINKSPRQFFTGHAHETWIDH 575 Query: 642 MKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEIN 701 ++E GL A + +EITE ++ ++Q R+ GV++S+DDFGTG S + ++ Sbjct: 576 LQEIGLPAECIAIEITEGLLLDERPDVTSKLQQFRRAGVQVSLDDFGTGYSAMAYLKRLD 635 Query: 702 PDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQA 759 D +K+D F D+ T I I ++ + V+AEGVE+ + L GC Sbjct: 636 IDYLKIDQSFVRDMTSTPSDRAITEAIIAMSHKLGLRVVAEGVETREQRDLLSAAGCDFG 695 Query: 760 QGYLYQKPMP 769 QGY + + +P Sbjct: 696 QGYWFSRALP 705 >UniRef50_A9CI56 GGDEF family protein n=5 Tax=Rhizobiales RepID=A9CI56_AGRT5 Length = 694 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 92/246 (37%), Positives = 134/246 (54%), Gaps = 10/246 (4%) Query: 530 IARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGF 589 +A +R + E L YQ D + +I+G EAL RW ERG++SP++FI IAE GF Sbjct: 427 LAIAMRSGLANNEFELYYQQQNDTKSGSIVGFEALLRWKHPERGMVSPVEFIPIAEQTGF 486 Query: 590 INELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKA 649 I ELG +++ A +Q A K + +NV+P QL + F ++ I+ E GL Sbjct: 487 IVELGEWVLREAC------AQAARWKKSLAIAVNVAPQQLADNDFPDKVERILAETGLAP 540 Query: 650 NSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDS 709 L +EITE I + H + I +L+ GV+I++DD+GTG S+L D IK+D Sbjct: 541 ERLELEITEGSIIADHRHALVTIRKLKSLGVKIAMDDYGTGYSSLSTLQSFPFDKIKIDR 600 Query: 710 QFTGDIFGT---AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQK 766 F D T + IVR LA IPV+AEGVE++ L + GC+Q QG+ + K Sbjct: 601 AFI-DGLSTNVQSEAIVRSTLILAHSLNIPVLAEGVETKAHIEFLRREGCLQVQGFFFGK 659 Query: 767 PMPFSA 772 P P ++ Sbjct: 660 PGPLTS 665 >UniRef50_A4XG32 Diguanylate cyclase/phosphodiesterase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XG32_CALS8 Length = 509 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 125/494 (25%), Positives = 232/494 (46%), Gaps = 27/494 (5%) Query: 291 FAFIIIV-LLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISI 349 + F++I +L+ +L+ +++ SE ++L NTL L + ++ +E +++ Sbjct: 17 WMFVVITGILLYFLIRGKLYTLHLSE-SKLQNTLEELQKTNAEL-------SQTQEKLAV 68 Query: 350 KNSIAEMKDAEIERSNKLLSLISYDQESGF--IKNMAIIESN-NNQYLAVGIIKLCGLEA 406 + A+I + SL ++ F + AI E+ NQ LA+ I + L Sbjct: 69 QYKKLAKNQAKIRELSFFDSLTGLPNKNHFQLVLEKAIKEAYLKNQQLAIIYIDIDNLNK 128 Query: 407 VEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD-----LYLLLCRENVQTFTRKIA 461 V G + +++K+ R+ A + D LY + + F RK Sbjct: 129 VNNTLGHIAGDSVLKKIANRLKSVIADKGFVARLTGDEFAIILYNFIDIHLLDYFIRKFT 188 Query: 462 MVNDFDSSFGYRNLRIHKSAICE----PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCD 517 + F+ + + + +A P G +A + E A++S ++ + F F + Sbjct: 189 SI--FNKPWKIMDYEFYITASIGIAIFPNDGNDATTLLENAHKALNSAKEKGKNIFCFYN 246 Query: 518 DAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISP 577 ++E + ++R A+E + L YQPI+D+ I GAEAL RW+ E+G I P Sbjct: 247 KEMDKALQEQFELEWSLRKAIEQNQFKLFYQPIIDLKRMKICGAEALIRWIHPEKGFIPP 306 Query: 578 LKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHER 637 L FI IAE G I+++G +I ++ + + + ++ D F + +NVS + + +F + Sbjct: 307 LSFIPIAEQTGLISKIGEWVISRSVSDLKEI--KMAINDSFYVSVNVSLKEFSTSNFVDN 364 Query: 638 FTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRF 697 + ++ +EITE+V + + L+++G++I +DDFGTG S+L Sbjct: 365 VLYSINSLKIEPTEFGIEITESVAMVDPQKTIGILNFLKERGIKILLDDFGTGYSSLNYL 424 Query: 698 YEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLG 755 ++ D +K+D F ++ K+ + + DL+ + V+AEG+E E A L Sbjct: 425 KQLPIDIVKIDRSFIQNMTYDQKEQKMAKSLIDLSHILDLKVVAEGIEDERQAELLKTFS 484 Query: 756 CVQAQGYLYQKPMP 769 C QGYL+ KPMP Sbjct: 485 CDFGQGYLFGKPMP 498 >UniRef50_A3UFJ0 Putative uncharacterized protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UFJ0_9RHOB Length = 686 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 87/243 (35%), Positives = 134/243 (55%), Gaps = 10/243 (4%) Query: 530 IARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGF 589 +A+++R A+E GEL + YQP +D+ + + G EAL RW RG+ISP +F+ +AE G Sbjct: 422 LAQDLRTALETGELRMFYQPQIDLKSGEVCGYEALVRWPHPVRGMISPAEFVPLAEANGL 481 Query: 590 INELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKA 649 I LG +++T E + + IN+S QLN+PH + M GL Sbjct: 482 IGRLGDWVLETTCEEVAQWPGAPKVA------INLSAIQLNDPHLVGKVLQAMVSTGLSP 535 Query: 650 NSLCVEITET-VIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVD 708 + L +E+TET +I + + + + +++ GV +++DDFGTG S L+ D IK+D Sbjct: 536 SQLEIELTETALIHDLGQSLNV-LRRIKALGVSMALDDFGTGYSALETLRRFPFDKIKLD 594 Query: 709 SQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQK 766 FT + G + ++ + LA IPV+AEGVE+ D L +GC QAQGYL + Sbjct: 595 KGFTDGLSDGGRSRAVISAVVTLAHNLDIPVLAEGVETADQLDLLNMMGCEQAQGYLIGR 654 Query: 767 PMP 769 P P Sbjct: 655 PAP 657 >UniRef50_Q0A7B5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A7B5_ALHEH Length = 735 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 84/248 (33%), Positives = 132/248 (53%), Gaps = 4/248 (1%) Query: 526 ENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAE 585 E+I + R+++ A+ +L L YQP+VD T + EAL RW ERG+I P FI +AE Sbjct: 474 EDISLRRDLQEAIAGDQLMLHYQPVVDAATGYLHSVEALVRWQHPERGLIPPGVFIPLAE 533 Query: 586 DIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKEN 645 G I ++G+ I+ A + R + +N+SP Q P F + ++ E+ Sbjct: 534 QTGQIIDIGHWILHRACRDMADLKARTGRT--LPVAVNISPLQFRRPGFLDNLAQVLSES 591 Query: 646 GLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSI 705 GL A +L +E+TE V+ E + LR GV +IDDFGTG S+L + D + Sbjct: 592 GLPAETLELELTEGVLMADTEATIDTLAALRSLGVHAAIDDFGTGFSSLSYLRYLPIDKV 651 Query: 706 KVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYL 763 K+D F D+ + IV+ + +A + + V+AEG+E+E R+L GC QG+ Sbjct: 652 KLDRSFIQDVTNSRNTAAIVQGVITMAHHLELAVVAEGIETEAQRRDLQDRGCDLLQGFF 711 Query: 764 YQKPMPFS 771 + +PMP + Sbjct: 712 FARPMPLT 719 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 96/261 (36%), Positives = 145/261 (55%), Gaps = 8/261 (3%) Query: 513 FIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAER 572 F F D A I + + ++R A+ E+ L YQP VD + ++LGAEAL RW ++ Sbjct: 969 FRFFDPAMQALITKRAAMEEDLRQALRRDEMRLYYQPQVD-SQGSLLGAEALVRWEHPQQ 1027 Query: 573 GIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEP 632 G++SP FI +AE+ G I +G +++TA + ++ R +L +NVS QL++ Sbjct: 1028 GLLSPAAFIELAEETGLILPIGEWVLRTACMQLVAWAGRPETAG-LVLSVNVSARQLHQH 1086 Query: 633 HFHERFTTIMKENGLKANSLCVEITE-TVIERINEHFY-LNIEQLRKQGVRISIDDFGTG 690 F +R +I+KE G SL +E+TE T++E I E +NI L+ GV S+DDFGTG Sbjct: 1087 DFIDRVFSILKETGANPQSLKLELTESTLVENIEEMITKMNI--LKAMGVGFSMDDFGTG 1144 Query: 691 LSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVA 748 S+L + +K+D F D+ IV+ I L I V+AEGVES + Sbjct: 1145 YSSLAYLKRLPLSQLKIDRSFVRDVLVDSNDASIVQTIIALGHGLGIEVVAEGVESWEQQ 1204 Query: 749 RELIKLGCVQAQGYLYQKPMP 769 + L K GC++ QGYL+ +P P Sbjct: 1205 QFLEKHGCLEYQGYLFGRPQP 1225 >UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacteria RepID=A2SDI4_METPP Length = 1006 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 95/283 (33%), Positives = 151/283 (53%), Gaps = 15/283 (5%) Query: 506 RDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALC 565 R H FS+ + DDA ++ + ++R A+ G+ + YQP+V TR + EAL Sbjct: 732 RYHFFSKAV--DDAASARLQ----LEADMRRALAAGQFIVHYQPVVHGRTRDAVAVEALL 785 Query: 566 RWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVS 625 RW A +G+ SP FI +AE+ G I +G+ +++ A + R +S A + +NVS Sbjct: 786 RWDRAGQGLQSPAVFIPVAEESGLIVPMGHWVLRQACEQLRAWSGTA--LGGISVAVNVS 843 Query: 626 PWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISID 685 P QL + F + ++ G+ + L EITE+ + + E + +L+ GVRI+ID Sbjct: 844 PVQLAQADFVDTVADVLHATGVDGSRLEFEITESTLMQDPEATLEMLRRLKGLGVRIAID 903 Query: 686 DFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVE 743 DFGTG S+L D++K+D F D+ A ++VR I +AR R+ V+AEGVE Sbjct: 904 DFGTGYSSLGHLKRFPVDTLKIDHTFVRDLEADADDRELVRAILAMARSLRLHVVAEGVE 963 Query: 744 SEDVARELIKLGCVQAQGYLYQKPMP---FSAW--DKSGKLVK 781 +E A L + C QGYL+ +P +AW D++ L + Sbjct: 964 TEAQAAILAAMECPAFQGYLFARPAGAAVTAAWLQDRAATLAR 1006 >UniRef50_Q2BPW4 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPW4_9GAMM Length = 837 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 123/443 (27%), Positives = 214/443 (48%), Gaps = 32/443 (7%) Query: 359 AEIERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAV-------- 410 EI++S + ++Y E + N + N+ +L++G + G +A A Sbjct: 397 TEIKKSEARIKRLAYFDELTRLPNRKLF--NDRLHLSLGYAQEHGHKAALAFLDLDFFQR 454 Query: 411 ----FGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLY--LLLCRENVQT----FTRKI 460 FG+D ++++R++ +RI + + F D + +L E+ Q TR + Sbjct: 455 VNDRFGLDAGDQVLREVGRRIENVLCEGDTVARFGGDSFNMILTDVEDDQAVSEYLTRLL 514 Query: 461 AMVNDFDSSFGYR-NLRIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDA 519 +VN G NL + P +A + + A+ +D + + F Sbjct: 515 EVVNQPIMVAGSDINLTVSIGVSFFPSDATDAEDLFQCAEAAVKQAKDFGRNSYRFFSSE 574 Query: 520 KLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLK 579 + ++ ++ ++ A+E + L YQP VD+ R +GAEAL RW E G I P + Sbjct: 575 QHRLVQSRYRMSGDLHRAIETDQFQLYYQPKVDLQ-RQTVGAEALIRWSHPELGFIPPGE 633 Query: 580 FITIAEDIGFINELGYQIIKTAMGEFRH-FSQRASLKDDFLLHINVSPWQLNEPHFHERF 638 FI +AED+GFI+++G+ ++ A+ + + + Q S++ + INVS Q+ E Sbjct: 634 FIPLAEDLGFIDQIGHYVLCEAVRQAKEWYDQGLSVQ----VAINVSAKQMQRRDMAEEV 689 Query: 639 TTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFY 698 ++++ + L VE+TET + I++LR G+ I+IDDFGTG S+L Sbjct: 690 LQVVEQYSCPPHLLAVELTETSFLHCLDETRATIKKLRDAGISIAIDDFGTGFSSLSYIR 749 Query: 699 EINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGC 756 I+ D +K+D F +I + IV I ++++ + V+AEG+E+E L L C Sbjct: 750 NIDMDVLKIDRSFLINIENSDVDRTIVSSIIEMSQAMGLQVVAEGIETETQFAMLKALNC 809 Query: 757 VQAQGYLYQKPMP---FSAWDKS 776 Q QGYL +PMP FS W K+ Sbjct: 810 DQIQGYLIARPMPAENFSDWFKA 832 >UniRef50_A6F6X6 PAS:GGDEF n=1 Tax=Moritella sp. PE36 RepID=A6F6X6_9GAMM Length = 705 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 91/280 (32%), Positives = 141/280 (50%), Gaps = 8/280 (2%) Query: 501 AISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILG 560 A+S R H + D E + +++HA+ + L YQP+VD N++A+LG Sbjct: 405 ALSRSRKHTEQYYTLFDPVLEAHAEAEKRLIVDLKHAINNKAIDLYYQPVVDANSKAVLG 464 Query: 561 AEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLL 620 EAL RW E+G+I P+KFI +AE I +LG +++ A + + + D + Sbjct: 465 VEALARWHHPEQGLIMPIKFIELAEKNNLIGQLGEVVLEKACQQLALWRAQGI---DIFM 521 Query: 621 HINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGV 680 +N+SP Q N+P + + + A+ L +E+TE+ + N +E+L GV Sbjct: 522 AVNLSPIQFNDPQLISKIKYYIDYYDIPAHRLEIEVTESALLESNHTTGHMLEELINLGV 581 Query: 681 RISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVI 738 R++IDDFGTG +L + +K+D F ++ T I R + LAR I V Sbjct: 582 RLAIDDFGTGYCSLSYLKNMPAHKLKIDKSFVDELELDKTTTAITRSVISLARELNITVT 641 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPMP---FSAWDK 775 AEGVE E + L C Q QGYL+ +P+P F W K Sbjct: 642 AEGVEEESQMKWLQAQQCDQFQGYLFSRPLPSDKFCLWYK 681 >UniRef50_Q1H236 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=Q1H236_METFK Length = 722 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 90/255 (35%), Positives = 143/255 (56%), Gaps = 5/255 (1%) Query: 518 DAKLNEI-EENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIIS 576 +A +N + + + + +R A+E ++ L YQP VD+ TR I+G EAL RW E GIIS Sbjct: 441 EASMNAMFHKKLSMENELRRAIEKKQIMLHYQPQVDVETRKIIGLEALARWHHPELGIIS 500 Query: 577 PLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHE 636 P +FI +AE+ G I L ++ A + + + L +F L +NVSP + E F Sbjct: 501 PTEFIPLAEETGLIFSLSEMLLGEACKQMQLWEAAGLL--NFRLALNVSPQLVEEESFVS 558 Query: 637 RFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKR 696 + + ++ + LK +EITE ++ R E+ ++ L K G+RI++DDFGT S+L Sbjct: 559 KTLSYIQSHHLKPEFFEIEITENLLVRDLENTVAKLKALGKHGIRIALDDFGTCYSSLSY 618 Query: 697 FYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKL 754 + +IK+D F GDI + I+ I +A+ ++ +IAEGVE+ + L K+ Sbjct: 619 LRQFPIHNIKIDKSFVGDINTHDESVPIITAISGIAKGFKLDLIAEGVETLQQMKTLHKM 678 Query: 755 GCVQAQGYLYQKPMP 769 GC QGYL+ KP+P Sbjct: 679 GCNIMQGYLFSKPLP 693 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 86/239 (35%), Positives = 129/239 (53%), Gaps = 4/239 (1%) Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 ++R + GEL + YQP+VD R +LG EAL RW RG+ISP FI +AE G I Sbjct: 582 DLRQGLARGELCVYYQPVVDHRAR-LLGVEALVRWRHPVRGMISPADFIPLAEQTGLILP 640 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 LG Q+++TA G+ + + +R + + +NVS Q +P F ++ G L Sbjct: 641 LGQQVLQTACGQLQRWGERKQTRH-LSVSVNVSARQFRQPGFVAEVLQTLQGCGADPRKL 699 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +E+TE+++ E +EQL+++GV ++DDFGTG S+L + D +K+D F Sbjct: 700 KLELTESLLLGDVEDTIARMEQLKREGVGFALDDFGTGYSSLSYLKRLPLDQVKIDQGFV 759 Query: 713 GDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 D+ IVR I LA+ + V+AEGVE+ L GC QGYL+ +P P Sbjct: 760 RDVLTDPNDAAIVRTILALAQSLDLEVVAEGVETTGQLAFLRLHGCEGFQGYLFGRPGP 818 >UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2C0_METRJ Length = 703 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 92/241 (38%), Positives = 127/241 (52%), Gaps = 8/241 (3%) Query: 532 RNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFIN 591 R++R A+E EL L YQP V T +LG EAL RW RG++ P FI +AE+ G I Sbjct: 445 RDLRQAIEGDELILYYQPQVSTGTGRLLGFEALVRWEHPTRGLVPPNAFIPLAEESGLIL 504 Query: 592 ELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANS 651 LG +++ A E ++ LK + +N+SP Q + ER I+ E GL Sbjct: 505 PLGEWVLRAACREAARWAH--PLK----VAVNLSPRQFQQADLPERVLAILTETGLAPTR 558 Query: 652 LCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQF 711 L +EITET+I + +L+ GV I++DDFGTG S+L D IK+D F Sbjct: 559 LELEITETLIINDMARALGILRRLKAFGVSIAMDDFGTGYSSLATLQAFPFDKIKIDRSF 618 Query: 712 TG--DIFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 G ++ A IVR + L R + V+AEGVE++ R L C +AQGYL KP P Sbjct: 619 VGHVEVSPQAAVIVRAVLGLGRSLGMSVVAEGVETDAQMRFLAAEACDEAQGYLISKPQP 678 Query: 770 F 770 Sbjct: 679 I 679 >UniRef50_A4BCU3 Response regulator/sensory box/GGDEF domain/EAL domain protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BCU3_9GAMM Length = 723 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 118/425 (27%), Positives = 206/425 (48%), Gaps = 21/425 (4%) Query: 359 AEIERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNK 418 A + + + L L++ + +G +K + + Q LA+ I L + + G ++ Sbjct: 284 ARLAQYDALTGLVNRNAFNGLLKKALSRSARHEQPLALLFIDLDQFKTINDNHG----HE 339 Query: 419 IVRKLCQRIAEKYAQCC---DIVT-FNADLYLLLCRENVQTFTRKIAMVND-----FDSS 469 I L Q +A + C DI+ D ++++ E++Q T+ A V+ ++ Sbjct: 340 IGDSLLQEVAMRLTDCVRNGDIIGRLGGDEFVIML-ESLQA-TKDAARVSQSVLDALEAP 397 Query: 470 FGYRNLRIH-KSAICEPLQGENAWSYAEKLK---LAISSIRDHMFSEFIFCDDAKLNEIE 525 F R +I ++I + ++A + E L+ +A+ ++ + + F D + Sbjct: 398 FTIRGHQIFIGASIGIAVYPDSALTARELLRCADIAMYRSKEEGRNRYRFFTDEMQESVR 457 Query: 526 ENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAE 585 E + + ++R A E + QP + + T +++GAE L RW + + P FI AE Sbjct: 458 EALQLEIDLRRAYRQQEFDIYLQPKICMATESVIGAEILIRWPRPDGSFLPPDVFIPKAE 517 Query: 586 DIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKEN 645 ++G I+++G + + R + Q+ + DF IN+S QL+ H E I+KE Sbjct: 518 EMGLIHDIGEWVFRETCDTIRSWQQQNRIPLDFTFAINISMRQLHTGHLAEDIAAIVKEV 577 Query: 646 GLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSI 705 G+ N L VE+TE+++ + + L +Q ++ISIDDFGTG S+L ++ D+I Sbjct: 578 GIDPNCLEVEVTESIMMQDPRVTIDALNALHQQKIKISIDDFGTGYSSLSHLRQLPIDAI 637 Query: 706 KVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYL 763 K+D F + G A IV I L + VIAEG+E+E + L GC AQGY Sbjct: 638 KIDKSFVQALESDGQADAIVNTIISLGHNLDMRVIAEGIETEANRQALTAAGCDVAQGYF 697 Query: 764 YQKPM 768 Y KPM Sbjct: 698 YAKPM 702 >UniRef50_Q30T73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30T73_SULDN Length = 707 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 109/389 (28%), Positives = 200/389 (51%), Gaps = 10/389 (2%) Query: 390 NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC 449 NN+ A+ + L + V G + ++ ++ ++ E +Q I D +++L Sbjct: 313 NNETFAILFLDLDNFKWVNDSLGHQIGDLLLIEIAAKLKEIISQDSIISRLGGDEFVILA 372 Query: 450 R-ENVQTFTRKI-AMVNDFDSSFGYRNLRIHKS-AICEPLQGENAWSYAEKLKLAISSI- 505 EN+ T ++ ++ +N ++ S +I L +N +Y + LK A +++ Sbjct: 373 PYENLLTISQLANTILCSVKDPIKVQNREVNVSWSIGISLYPQNGENYNDLLKNADAAMY 432 Query: 506 --RDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEA 563 ++ + F + +D + + + +R+A+ FL YQP +G EA Sbjct: 433 ESKNRGKNTFRYFNDMMNQDAMYRLELDTKLRYAITNNSFFLNYQPKYSFEHGKTIGVEA 492 Query: 564 LCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHIN 623 L RW+ + G I+P KFI IAE+ +INE+G ++K A+ + + + + L + IN Sbjct: 493 LIRWIDKDLGFIAPDKFIPIAEESSYINEIGSWVMKQALNDLKIINSK--LSSPISISIN 550 Query: 624 VSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRIS 683 VS QL F++ T++KE+G++ + + EITET I + +H +++++ GV+IS Sbjct: 551 VSGKQLEHESFYDEARTLLKESGIEPSLVEFEITETSIMQNIDHVVDILKKIKMLGVKIS 610 Query: 684 IDDFGTGLSNLKRFYEINPDSIKVDSQFTG--DIFGTAGKIVRIIFDLARYNRIPVIAEG 741 IDDFGTG S++ ++ D++K+D +F +I + IV I LA+ ++ +AEG Sbjct: 611 IDDFGTGYSSMSYLKKLPIDTLKIDREFIKELEIDEDSKSIVNAIIALAKSFKLTTVAEG 670 Query: 742 VESEDVARELIKLGCVQAQGYLYQKPMPF 770 VE+E+ L L C QGYLY +P+ Sbjct: 671 VENEEQKLILDGLNCDMTQGYLYSRPLSL 699 >UniRef50_A8IKF7 Putative cylclic diguanylate phosphodiesterase n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IKF7_AZOC5 Length = 448 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 89/239 (37%), Positives = 132/239 (55%), Gaps = 4/239 (1%) Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 +R A+ G+ L YQP VD +R ILGAEAL RW + + GII P KFIT+AE+ G I Sbjct: 195 EMRRALARGDFRLHYQPQVD-PSRRILGAEALLRWFNPDHGIIPPAKFITLAEETGLIVP 253 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 LG +++TA + +++ + +D + +NVS Q +P F R I+ G + L Sbjct: 254 LGDWVLRTACAQLALWAEIPATRD-LTISVNVSASQFRQPDFVPRVREILAHTGADPSRL 312 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +E+TE++ R + + LR G+R S+DDFGTG S+L + D IK+D F Sbjct: 313 KLELTESLFVRDPDVAAEKMSALRDVGLRWSLDDFGTGYSSLHMLRNLPVDEIKIDKTFV 372 Query: 713 GDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 + IVR++ D+ + ++AEGVE+E+ R L GC QGYL+ K MP Sbjct: 373 SRMASEEQDRAIVRLLIDMCSTLGLFLVAEGVETEEQYRLLQAWGCDGFQGYLFGKAMP 431 >UniRef50_A0YU61 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with Response Regulator Receiver modulation n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YU61_9CYAN Length = 641 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 86/241 (35%), Positives = 134/241 (55%), Gaps = 2/241 (0%) Query: 530 IARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGF 589 + + +R +E E L YQPIV + T + G EAL RW E GIISP FI IAE+ G Sbjct: 369 LEQKLRIGIENQEFCLYYQPIVSLTTGELAGFEALVRWQHPEEGIISPGLFIPIAEETGL 428 Query: 590 INELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKA 649 I ELG I+ +A+ +++ + Q+ D +LHIN+S QL++ F ++ E ++ Sbjct: 429 IYELGDWILNSAISQWKEWQQKFPCCLDLVLHINISAVQLSQYKFFTNLEKMLIEKNVER 488 Query: 650 NSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDS 709 + L +EITE+ + +++ + G+++ IDDFGTG S L E+ DS+K+D Sbjct: 489 SGLKLEITESCLISKQVKTSRLLDRAKAMGLQLCIDDFGTGYSCLSHLRELPLDSLKIDR 548 Query: 710 QFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKP 767 F ++ +VR I LA + ++AEG+E+ + + L LGC QGYL+ KP Sbjct: 549 SFVMNLEDKDHDATVVRAIIALAHNLGMELVAEGIETSEQWQHLRMLGCEWGQGYLFAKP 608 Query: 768 M 768 M Sbjct: 609 M 609 >UniRef50_Q31K70 Diguanylate cyclase/phosphodiesterase n=4 Tax=Synechococcus elongatus RepID=Q31K70_SYNE7 Length = 901 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 93/260 (35%), Positives = 145/260 (55%), Gaps = 7/260 (2%) Query: 514 IFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERG 573 IF N ++ N+ + +R A++ ++ L YQPIVD+ T A++GAEAL RW E G Sbjct: 625 IFSAKLSANSLK-NLALETALREAIKQADIDLFYQPIVDLETGALVGAEALARWFHPELG 683 Query: 574 IISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL--KDDFLLHINVSPWQLNE 631 I PL+F+T+AE I LG I++ A + H Q+ L DF+LH+N+S Q+ Sbjct: 684 NIPPLEFVTLAERSKLIFSLGNFILEKACLQI-HLWQQDHLITPGDFILHVNISAQQICH 742 Query: 632 PHFHERFTTIMKENGLKANSLCVEITE-TVIERINEHFYLNIEQLRKQGVRISIDDFGTG 690 F + I++ + A +L +EITE +V E I++ +++L+ GV++SIDDFGTG Sbjct: 743 EDFEDWIKDILQRTEISAQNLMLEITESSVAEDIDQQLLKLLDELKSMGVQLSIDDFGTG 802 Query: 691 LSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVA 748 S+L + +S+K+D F I G ++ + LA + V+AEG+E E Sbjct: 803 YSSLSYLQRLPVNSLKIDRSFIHQINLAGDNRQVAQATIALAHSFGLEVVAEGIEEESQL 862 Query: 749 RELIKLGCVQAQGYLYQKPM 768 L +LGC QGY + KP+ Sbjct: 863 YWLRQLGCDMGQGYYFSKPL 882 >UniRef50_A1ASF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASF8_PELPD Length = 1023 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 119/417 (28%), Positives = 194/417 (46%), Gaps = 21/417 (5%) Query: 370 LISYDQESGFIKNMAIIE---------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIV 420 L +YD E+G + ++ + + + I L G +A+ VFG D ++I+ Sbjct: 209 LANYDPETGLPNHSLFMDRLERTIGQDARDRNKTVIIYISLTGYKAIVDVFGHDGESRII 268 Query: 421 RKLCQRIAEKYAQCCDIVTFNADLYLLLCRE-----NVQTFTRKIAMV--NDFDSSFGYR 473 + L ++I Q + D + ++ +V T ++ + +S G Sbjct: 269 KPLSRQIVAAVRQHDSVARIRHDEFAVMLGGVTNDGDVTTILNRLQQIFAVPLPTSQGEC 328 Query: 474 NLRIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARN 533 + C P G A + +A++ R F ++ + E I Sbjct: 329 AIPACMGVACFPTDGLTANIIMQNAHIAMNQARQAGIP-LQFYSESMNRKAMERFAIETC 387 Query: 534 IRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINEL 593 + A++ GE FL YQP V+I+ + G EAL RW G+I P +FI +AE+ G I L Sbjct: 388 MLRAIDAGEFFLCYQPKVEIHDMKLTGVEALVRWQRPGEGVIPPDRFIALAEENGMIVRL 447 Query: 594 GYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLC 653 G I+ A + R + Q A L ++ +N+S QL E F E+ I++E GL+ L Sbjct: 448 GGWILGEACRQNRAW-QDAGLPRT-VVSVNISARQLRENSFVEQVERILEETGLEPCYLD 505 Query: 654 VEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTG 713 +E+TE+V+ ++ + +L++ GV IS+DDFGTG S+L + D+IKVD F Sbjct: 506 LELTESVVMANSDEIVQKLTRLKQLGVGISVDDFGTGYSSLSYLKHLPVDTIKVDRSFVR 565 Query: 714 DIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 DI IV + + + VIAEGVE+ + L C QAQGY + KP+ Sbjct: 566 DIVHDPDDKAIVEAVIAMGHALGLTVIAEGVETLEQLEFLRSQNCNQAQGYYFSKPL 622 >UniRef50_B6IMZ9 Diguanylate cyclase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IMZ9_RHOCS Length = 609 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 93/257 (36%), Positives = 136/257 (52%), Gaps = 8/257 (3%) Query: 517 DDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIIS 576 DDA + ++R A++ +LFLVYQPI+ + +I G EAL RW ERG I Sbjct: 344 DDALRERALSRLRTESDLRVALDSDQLFLVYQPIIRMQNGSIAGFEALVRWSHPERGTIL 403 Query: 577 PLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHE 636 P +FI +AE+ G I LG +K A + + + +R D + +NVS QL + Sbjct: 404 PGEFIALAEETGLILRLGRWALKEAALQIKDWRRRTG--RDLFVSVNVSGRQLMDDDMAA 461 Query: 637 RFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKR 696 ++ E G++ +L +EITE+++ + +RK GVR+ +DDFGTG SNL Sbjct: 462 AVAQVLGETGVEPRALKLEITESLLLDDTARCVQMLHDIRKLGVRLCLDDFGTGFSNLSY 521 Query: 697 FYEINPDSIKVDSQFTGDIFGTAG----KIVRIIFDLARYNRIPVIAEGVESEDVARELI 752 + D++K+D F TAG +I RII LA + V+AEGVE + A L Sbjct: 522 LHSYPVDTLKIDRSFV--RAATAGDRRAEIARIITMLAAALDLEVVAEGVERDAEAAFLR 579 Query: 753 KLGCVQAQGYLYQKPMP 769 L C AQGY + +PMP Sbjct: 580 DLHCQYAQGYFFARPMP 596 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 91/260 (35%), Positives = 144/260 (55%), Gaps = 7/260 (2%) Query: 518 DAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISP 577 +A+ EI E I +R+A++ E L YQP VD+ T I+GAEAL RW E G++ P Sbjct: 673 NARAREILE---IESQLRYALDRDEFVLHYQPQVDLKTGEIIGAEALIRWQHPELGLLGP 729 Query: 578 LKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHER 637 ++FI +AE+ GFI ++G +I+ A + + ++ + L +N+S Q + Sbjct: 730 VRFIEVAEERGFIVQIGNWVIQEACRQLAQWRRQGLPR--ISLAVNLSTLQFRQQDLAVH 787 Query: 638 FTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRF 697 + +GL + L VE+TE+VI E I++++ G+++SIDDFGTG S+L Sbjct: 788 LQRALSAHGLVGSDLDVEVTESVIMDDVETTIHTIDRIKSMGLQLSIDDFGTGYSSLSYL 847 Query: 698 YEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLG 755 D +K+D F DI A I R I ++A+ + VIAEGVE+ + + L + G Sbjct: 848 KRFKADKLKIDRSFVRDIPMDADDSAIARAIINMAKNLNMTVIAEGVETIEQWKFLDREG 907 Query: 756 CVQAQGYLYQKPMPFSAWDK 775 C AQGYL KP+P +++ Sbjct: 908 CHAAQGYLLAKPVPAKEFER 927 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 136/242 (56%), Gaps = 4/242 (1%) Query: 530 IARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGF 589 I +R A+E E L YQP V++ + I+GAEAL RW G++ P++FI +AE+ GF Sbjct: 680 IESQLRFALERDEFVLHYQPQVEMESGRIVGAEALIRWNHPSLGLLGPVRFIQVAEERGF 739 Query: 590 INELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKA 649 I ++G +I A + + +RA L + L IN+S Q +P + ++ +GL Sbjct: 740 IVQIGNWVIAEATRQLVEW-RRAGLPE-LTLAINLSALQFRQPDLALQVKQALESSGLPG 797 Query: 650 NSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDS 709 ++L +E+TE++I + I+ ++ G+R+SIDDFGTG S+L D +K+D Sbjct: 798 HALDIEVTESIIMEDAQATIQTIDNMKNMGLRLSIDDFGTGYSSLSYLKRFKADKLKIDR 857 Query: 710 QFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKP 767 F DI A I R I ++A+ + V+AEGVE+ + + L + GC QGYL KP Sbjct: 858 SFVRDIPQDADDSAIARAIINMAKNLNMQVVAEGVETMEQWQFLEQEGCDFVQGYLIAKP 917 Query: 768 MP 769 +P Sbjct: 918 LP 919 >UniRef50_A4XWY6 Diguanylate phosphodiesterase n=1 Tax=Pseudomonas mendocina ymp RepID=A4XWY6_PSEMY Length = 453 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 88/258 (34%), Positives = 136/258 (52%), Gaps = 10/258 (3%) Query: 516 CDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGII 575 D A+ +E++ ++ R A+ + L YQP ++ R ++GAE L RW +RG++ Sbjct: 193 TDTAERSELDSDL------RAALRERQFVLYYQPQLNAANR-VIGAELLIRWQHPQRGLV 245 Query: 576 SPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFH 635 P +FI AE+ G I LG +++ + RH+S +D L +N+S Q +P F Sbjct: 246 GPGEFIDYAENTGLIIPLGQWVLEQTAAQLRHWSDEPLFRD-IGLAVNISQKQFRQPGFV 304 Query: 636 ERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLK 695 +++ +G+ A L +E+TET+I E + L + GVR S+DDFGTG S+L Sbjct: 305 AEILALIERHGIAAQRLELELTETLIVHDMEDLTRKMNALVEHGVRFSLDDFGTGFSSLS 364 Query: 696 RFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIPVIAEGVESEDVARELIK 753 + +K+D F D+ A IVR + L + + VIAEGVE+E R L Sbjct: 365 HLKRLPLSKLKIDRSFICDVLTDANSETIVRTVIALGQSMGMTVIAEGVETEAQRRFLAD 424 Query: 754 LGCVQAQGYLYQKPMPFS 771 GC Q QGYL +PMP + Sbjct: 425 NGCSQFQGYLLGRPMPLA 442 >UniRef50_Q1YJA6 Putative diguanylate cyclase n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YJA6_MOBAS Length = 834 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 81/238 (34%), Positives = 130/238 (54%), Gaps = 7/238 (2%) Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 ++R A+E E L YQP VD+ + + G EAL RW +RG++SP +FI +AED G + Sbjct: 557 DLRLAVENEEFALFYQPFVDVERQVVTGFEALLRWHHPQRGLVSPAEFIPVAEDCGLMAS 616 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 +G +++TA Q A+ + + +N+SP Q +P + + GL + L Sbjct: 617 IGAWVLETAC------RQAAAWPSELAVSVNLSPVQFRDPGLADIVEAALARAGLASERL 670 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 VE+TE+++ + + +E+ R QG+ IS+DDFGTG S+L D IK+D F Sbjct: 671 RVEVTESLLLQHSATVLATLERFRDQGIGISMDDFGTGYSSLGYLSRFPFDKIKIDQSFV 730 Query: 713 GDIFGTAG-KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 ++ I+R + L+R + VIAEGVE+ L++ GC + QGY + +P P Sbjct: 731 RNLDDRENMAIIRAVIGLSRAMDLSVIAEGVETAAQRDILLREGCREMQGYFFSRPKP 788 >UniRef50_B5XR93 Diguanylate cyclase/cyclic diguanylate phosphodiesterase n=3 Tax=Enterobacteriaceae RepID=B5XR93_KLEP3 Length = 718 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 9/257 (3%) Query: 517 DDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIIS 576 DDA + I IR +E E + YQP+VD +T A+ G EAL RW +G ++ Sbjct: 459 DDALDAVRRHQLMIENGIRQGLEQDEFEVWYQPVVDADTLAMTGVEALLRWPRRPQGALA 518 Query: 577 PLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHE 636 P FI IAE G I+ LG +++ A + + DD LL +N+SP Q +P F Sbjct: 519 PDAFIAIAESSGLIDALGQFVLQRACSDLQPV-------DDLLLSVNISPAQFRDPAFEN 571 Query: 637 RFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKR 696 R + + L VE+TE+ + E +E L+ QG+ +++DDFGTG S++ Sbjct: 572 RVMKTVAACRFPPSRLQVEVTESYVLENPERSQAVVENLKAQGIAVALDDFGTGYSSIGY 631 Query: 697 FYEINPDSIKVDSQFTG--DIFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKL 754 DS+K+D G D A ++VR +AR + V+AEGVE L + Sbjct: 632 LRCFRFDSLKIDKSLAGRVDSDEQAAEMVRGTVRIARALGMTVVAEGVEDPQQLTLLRRA 691 Query: 755 GCVQAQGYLYQKPMPFS 771 GC + QGY + KPMP + Sbjct: 692 GCDRLQGYYFSKPMPIA 708 >UniRef50_B3E3S5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=cellular organisms RepID=B3E3S5_GEOLS Length = 1036 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 128/469 (27%), Positives = 218/469 (46%), Gaps = 33/469 (7%) Query: 330 TDQIEALKIR-EGDAKEIISIKNSIAEMKDA-----EIERSNKLLSLISYDQESGFIKNM 383 T I A +I EGD+ II +++ I +K A E+ R + + L ++ S + + Sbjct: 197 TGSISAHRILFEGDSCTIIFLED-ITLLKQAARKVEELTRYDAITGLPNHKLLSDRLAQL 255 Query: 384 AIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 I S Q L+V + L + G D+ ++++R + R+ + + + Sbjct: 256 LAISSREEQALSVLKLVLGRCPGAISARGGDDCDELLRSVADRLQDVLRETDTLAVLQKG 315 Query: 444 LYLLLC------RENVQTFTRKIAMVND----FDSSFGYRNLRIHKSAICEPLQGENA-- 491 + +L R+ + T+ + +N+ D+ F L H P G + Sbjct: 316 EFGILLPKSGSERDILPVITKLLDAINEPFSLHDAEF---QLNAHIGIAIFPGDGRSGEV 372 Query: 492 -WSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPI 550 +A +L S S F F + + E + I +I + GE F YQP+ Sbjct: 373 LLQHAHLAQLQAQSKSIAGESGFKFYAEEMNQAVREQMQIESSILRGLRAGEFFACYQPL 432 Query: 551 VDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQ 610 + + ++G EAL RW G++ P KFI +AE G I +LG ++++ A+ + + + Sbjct: 433 FSQDGKKLVGMEALARWQHPTLGLVGPDKFIPVAEANGAIVQLGDRMLELALQNCKQWRE 492 Query: 611 RASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYL 670 + + +NVS QL + F ER ++ GL ++LC E+TE+++ EH Sbjct: 493 QG--YPHLTVAVNVSTRQLKDRQFAERVARQLQMVGLPPDALCCELTESLL---MEHSNE 547 Query: 671 NIEQ---LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRI 725 N EQ L++ GV+++IDDFGTG S+L + D IK+D F ++ IV Sbjct: 548 NTEQIFRLKELGVKLAIDDFGTGYSSLTYLKHLPVDRIKIDRSFVNELDSNPDDRAIVVA 607 Query: 726 IFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 I +AR + V AEGVE+ + L +LGC QGY + KPM A++ Sbjct: 608 IIAMARSLHLKVTAEGVETPSQHQLLQELGCDTMQGYYFGKPMQREAFE 656 >UniRef50_B8DNW4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DNW4_DESVM Length = 1076 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 87/245 (35%), Positives = 130/245 (53%), Gaps = 7/245 (2%) Query: 528 IWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDI 587 + I ++R A+E E+ L YQP+V + + G EAL RW E G ISP +F+ +AED Sbjct: 808 LTIETDLRRAVERQEMRLHYQPVVALEDGGLHGVEALLRWTRTEGGDISPAEFVPVAEDT 867 Query: 588 GFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGL 647 G I +G ++ + R +++ A L ++H+N+S Q +P +++ G Sbjct: 868 GLITSIGAFALEEVCLQLRRWNE-AGLPPPGVVHVNISGRQFMQPGLPHAVEMLLERTGT 926 Query: 648 KANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKV 707 SL E+TE+V+ R + QLR G+R+ +DDFGTG S+L + DSIK+ Sbjct: 927 DPRSLRFEVTESVLMRHGSQAITVMAQLRDLGIRLCLDDFGTGYSSLGYLKRLPVDSIKI 986 Query: 708 DSQFTG----DIFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYL 763 D F D G A IVR I L + + ++AEGVE+ A L LGC AQG+L Sbjct: 987 DRSFVAGLEHDRDGQA--IVRSIVSLGLHLGLEIVAEGVETPTQAEMLASLGCRYAQGFL 1044 Query: 764 YQKPM 768 Y P+ Sbjct: 1045 YAPPV 1049 >UniRef50_Q1JXT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXT2_DESAC Length = 868 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 110/399 (27%), Positives = 198/399 (49%), Gaps = 12/399 (3%) Query: 383 MAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 +A IE+ +Q LA+ + L + + FG D +KI+R+ R+ I A Sbjct: 460 LAHIETGQDQ-LAILNLDLDHFKKINETFGFDFGDKILRQTAGRLKHLLRLEDSIARMGA 518 Query: 443 DLYLLLCR-ENV----QTFTRKIAMVNDFDSSFGYRNLRIHKSAICE--PLQGENAWSYA 495 D ++++ + EN+ + +R+I + + L + S P G + + Sbjct: 519 DEFVIIIQGENIAELASSISRRILHRLGTPLNIEDQELIVTTSVGISLFPEDGADPETLL 578 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 + ++A + + + F + + EN+ + +R+A+E EL L YQP +D+N+ Sbjct: 579 KNAEIARYAAKRQGRNRLHFFSSQLSDNVRENLVMESALRNAIERKELVLHYQPQLDLNS 638 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 ++G EAL RW E G++ P FI +AE+IG IN++G +++ A + + ++ Sbjct: 639 GDLVGVEALVRWQRPEIGLVPPGLFIPLAEEIGLINDIGLWVLEEACRQTIDWDRQGYHV 698 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 + +N++ Q+ H ++ I++ GL A L +E+TE+ I + + + Sbjct: 699 PR--MAVNLAVQQIESGHLPQQVLQILQYTGLPAQRLELEVTESAIMIEPKKAADALLEF 756 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYN 733 + G+R++IDDFGTG S+L + D +K+D F DI AG I R I +L+ Sbjct: 757 QSMGIRLAIDDFGTGYSSLAYLKRLPLDRLKIDRSFVMDIGTNAGDDIISRAIINLSNSL 816 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 + +AEG+E+ D L + GC QGYL+ KP+P A Sbjct: 817 GMDTVAEGIENTDQLEFLRREGCEIGQGYLFSKPLPADA 855 >UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Acidovorax RepID=A1TLA7_ACIAC Length = 850 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 89/264 (33%), Positives = 143/264 (54%), Gaps = 4/264 (1%) Query: 515 FCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGI 574 F D + L + + +R A+E EL L YQP+V+ + ++LGAEAL RW +RG+ Sbjct: 584 FFDPSMLQAVLARAALESELRLALESDELLLHYQPLVNGDG-SMLGAEALVRWRHPQRGL 642 Query: 575 ISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHF 634 + P +FI AE G I LG +++ A + +S R++ +L +NVS Q +P F Sbjct: 643 VMPGEFIPAAEQGGLIVALGQWVLERACAQLVAWS-RSAATAQLVLAVNVSVRQFRQPDF 701 Query: 635 HERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNL 694 ++ ++ +G + L +E+TE+++ E +EQLR GV +IDDFGTG S+L Sbjct: 702 VDQLLQTLRRSGAQPRLLKIELTESLLMADVEDVIARMEQLRAHGVGFAIDDFGTGYSSL 761 Query: 695 KRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELI 752 + D +K+D F D+ IVR I LAR + V+AEGVE+ + L Sbjct: 762 AYLKRLPLDQLKIDQSFVRDVLTDPNDAAIVRTILALARSLDLEVVAEGVETTGQLKFLQ 821 Query: 753 KLGCVQAQGYLYQKPMPFSAWDKS 776 + GC QG+L+ +P P + +++ Sbjct: 822 RHGCKAFQGHLFGRPAPAAVLERA 845 >UniRef50_Q11CC0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Chelativorans sp. BNC1 RepID=Q11CC0_MESSB Length = 442 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 120/437 (27%), Positives = 197/437 (45%), Gaps = 28/437 (6%) Query: 349 IKNSIAEMKDAEIERS-----NKLLSLISYDQESGFIKNMAIIESNNNQY---LAVGIIK 400 +++ + E +DA R L L SY F+K + + +N AV ++ Sbjct: 1 MRSQLIEGQDARGVREVVGSIEPLTGLGSYQS---FLKEVTRLIANRGDAPVPFAVIVLD 57 Query: 401 LCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL-----CRENVQT 455 L G + +FG + I+R+ R+ I D + +L E + Sbjct: 58 LDGFMPIRDLFGNTVGDDILRQAAMRLRAAIGDSSIIARVGMDDFAVLQPMISSEEAMAE 117 Query: 456 FTRKIAMVNDFDSSFGYRNLRIHKSAICEPLQG--ENAWSYAEKLKLAI-SSIRDHMFSE 512 R + V G R +++ SA C E A K + ++ + R S Sbjct: 118 RARMLIEVLCPPYEVGERTVQLSASAGCSLFSSKEETAELLLGKAETSLYHAKRSGRRSV 177 Query: 513 FIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAER 572 ++ + + I I + +R A+ GE+ +QPIVD+ +R ++G EAL RW +E Sbjct: 178 LVYTREMD-EAAKRRIRIEQALRQAVAEGEVEPHFQPIVDLPSRRVVGFEALARWTDSEL 236 Query: 573 GIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEP 632 G++ P FI IAE+IG I +L +++ A R + Q L N++P QL + Sbjct: 237 GLVPPCVFIPIAEEIGIIGQLTVLLLRKAAETARDWPQH------LFLSFNLTPSQLMDR 290 Query: 633 HFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLS 692 + + + +++ G L +EITET + IE LR G+R+S+DDFGTG S Sbjct: 291 NTGPQILSTLEKTGFDPKRLEIEITETGLLGDPASAARTIEHLRSMGIRVSLDDFGTGQS 350 Query: 693 NLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARE 750 +L R + D +K+D F + + I+R I + I VIAEG+E E A + Sbjct: 351 SLGRLRDFRFDKLKIDRAFVASLLEDRPSEHIIRAILAMCDGLGIDVIAEGIEEEAQAEK 410 Query: 751 LIKLGCVQAQGYLYQKP 767 L+ GC QG+L+ P Sbjct: 411 LVSFGCKGGQGFLFGTP 427 >UniRef50_Q4KBF3 Response regulator/GGDEF domain/EAL domain protein n=3 Tax=Pseudomonas fluorescens RepID=Q4KBF3_PSEF5 Length = 641 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 106/392 (27%), Positives = 194/392 (49%), Gaps = 19/392 (4%) Query: 391 NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR 450 Q LAV + L + + G +++++++ +R+ + + + + +D ++++ Sbjct: 234 EQRLAVMFLGLDRFKRINHALGYPAGDELLKRIARRLEQGMRESDSLFRYGSDEFVVVLH 293 Query: 451 EN-----VQTFTRKI-AMVNDFDSSFGYRNLRIHKSAICE--PLQGENAWSYAEKLKLAI 502 + ++ +K+ A V+ FD G+ +L++ S P G++A + +K ++A+ Sbjct: 294 DQQHPAQIRALAQKLLATVSQFDDIAGH-DLQVTASLGISLYPEDGQDALALIKKAEMAM 352 Query: 503 SSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAE 562 + ++ + F D + E ++ I A+E E L YQP + + + ++GAE Sbjct: 353 RTSKEQAPGSYCFFTDDMTHRAREQQYLESGILQALERREFHLHYQPKIHLASGNVVGAE 412 Query: 563 ALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHI 622 AL RW ++G ISP FI +AED G I + ++ A + R + Q A L L I Sbjct: 413 ALIRWQRPQQGWISPELFIPVAEDSGLITRISQWVLGEATRQCRAW-QNAGLP-PVPLSI 470 Query: 623 NVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRI 682 N+S +P ++ + +N L L +EITE V+ + E + ++ GVR+ Sbjct: 471 NLSAADFRQPQLLQQLRDALSDNALDPAWLELEITEGVLLQNVEVTLATLLAIKALGVRL 530 Query: 683 SIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK-----IVRIIFDLARYNRIPV 737 ++DDFGTG S+L + D +K+D F I G + + +V I +L R + V Sbjct: 531 AVDDFGTGYSSLSYLRKFPVDVLKIDQSF---IHGLSHEHKDAVLVSAIINLGRSLNLKV 587 Query: 738 IAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 IAEGVE+ L + GC +AQGY + K +P Sbjct: 588 IAEGVETHQQLTFLQQQGCEEAQGYYFSKALP 619 >UniRef50_A5N6D2 Predicted signal transduction protein containing an EAL domain n=2 Tax=Clostridium kluyveri RepID=A5N6D2_CLOK5 Length = 627 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 109/393 (27%), Positives = 192/393 (48%), Gaps = 13/393 (3%) Query: 386 IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLY 445 I+ N ++ ++ I L + V +FG + +K++R++ + + + N L Sbjct: 225 IKENPDEGFSIFQIDLDNFKNVNDIFGYEYGDKLLREIGNTLNSLHMGMVSRSSGNEFLI 284 Query: 446 LLLCRENVQTFTRKIAMVNDFDSSFGYRNL-------RIHKSAICEPLQGENAWSYAEKL 498 L E+V++ + ++ G NL + P G+ + Sbjct: 285 LKDKCESVESLNNTAQYI--LNTISGLWNLDGNEILISVSIGITVYPKHGDKFTTLIRNT 342 Query: 499 KLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAI 558 +A++ + + + + + +EI + + + +R A++ EL L YQP VD+ TR Sbjct: 343 DIALNKTKLLGKNSYKLFEKSMYDEILKKAEMEKELRRAVQNNELILYYQPQVDLKTRKA 402 Query: 559 LGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDF 618 + EAL RW + + G + PL FI++AE+ G I +G ++KTA + + + + D Sbjct: 403 VSFEALIRWKNPKLGWVMPLDFISLAEETGLIVPIGEWVLKTACMQNKVWKNKGYPYD-- 460 Query: 619 LLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQ 678 + INVSP QL + +F I+KE L++ L +EITE+V+ E I +L+ Sbjct: 461 FISINVSPIQLKDKNFLSIVKKILKETQLESQHLEIEITESVMMESLEGNLKVINELKGM 520 Query: 679 GVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIP 736 G+R+++DDFG+G S+L I +++K+D F I + K I I LA + Sbjct: 521 GIRVALDDFGSGYSSLNYLKSIPINTLKIDKTFIDGICKDSYKDIITEEIIKLAHRMELE 580 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 V+AEGVE E+ + L C + QGY + KPMP Sbjct: 581 VVAEGVEGEEQIQSLRGKNCNKIQGYYFGKPMP 613 >UniRef50_C6PYP8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PYP8_9CLOT Length = 638 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 97/274 (35%), Positives = 152/274 (55%), Gaps = 12/274 (4%) Query: 501 AISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILG 560 A+ ++ ++++F D A +E I I + A+E E FL YQP V++ I G Sbjct: 350 AMYKAKEAGLNKYVFYDKAISEALERKIKIENCLNKALENEEFFLCYQPQVNVFNNQIEG 409 Query: 561 AEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLL 620 EAL RW S E G +SP +FI IAE+ G I +G +IKTA + +++S++ D + Sbjct: 410 FEALLRWNSKELGFVSPAEFIPIAEETGLIIPIGRWVIKTACIQNKNWSEKNYKFDH--I 467 Query: 621 HINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITE-TVIERINEHFYLNI---EQLR 676 +N+S QL + F +I++E G++A S +EITE T+I+ +N LNI E+LR Sbjct: 468 AVNISAVQLQQLDFVNIVKSILEETGIRAESFEIEITESTLIKSLN----LNIKKLEELR 523 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNR 734 GV++++DDFGTG S+L + + IK+D F DI A + I+ + L Sbjct: 524 AIGVKVALDDFGTGYSSLNYLKMLPVNRIKIDKSFIDDICTGANEEIIIEALVFLGHKMN 583 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 + ++AEGVE E+ L C + QGY + KP+ Sbjct: 584 LDIVAEGVELEEQVEILKSKKCDKIQGYYFSKPL 617 >UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQI6_9GAMM Length = 955 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 88/256 (34%), Positives = 140/256 (54%), Gaps = 9/256 (3%) Query: 526 ENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAE 585 E+ ++ +R A+E + F+ YQP + I +++G EAL RW ERG+I P FI IAE Sbjct: 698 EHSFVQSALRDALEQSQFFVTYQPQLRIKDYSMVGVEALVRWQHPERGLIPPDSFIPIAE 757 Query: 586 DIGFINELGYQIIKTAMGE-FRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKE 644 + G I ELG I++TA + + +++ + +++NVS QL++ F E +KE Sbjct: 758 NSGLIRELGAWILRTACEQGVQWLNEQVNFG---RIYVNVSATQLHDESFTEAVIMCLKE 814 Query: 645 NGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDS 704 G A L +E+TE+ I + +H + ++ G+ ++IDDFGTG S+L ++ D Sbjct: 815 TGFPAEKLGLEVTESFIMKDPQHAINVLSSFKEIGIELAIDDFGTGYSSLSYLKQLPIDK 874 Query: 705 IKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGY 762 +K+D F DI I + + + + VIAEGVES+ A L+ C + QGY Sbjct: 875 LKIDQSFIRDIPDDPNDMAIAEAVIAMGKALNLEVIAEGVESQIQADFLLDKECTEVQGY 934 Query: 763 LYQKPM---PFSAWDK 775 LY P+ FS W+K Sbjct: 935 LYAHPLTADAFSEWEK 950 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 93/251 (37%), Positives = 138/251 (54%), Gaps = 11/251 (4%) Query: 526 ENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAE 585 E + + ++RHA+ E LVYQ VD + G EAL RW E G++SP+ FI +AE Sbjct: 613 ERLTMESSLRHALTREEFRLVYQVKVDSEDGRMSGVEALVRWHHPEMGLVSPVDFIPLAE 672 Query: 586 DIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKEN 645 +G I+++G +++TA + +H+ + +NVS Q E E ++E Sbjct: 673 AMGVISDIGEWVLRTACRQCKHWMDLG--LPPVRIAVNVSAQQFVETDVPEVVARALRET 730 Query: 646 GLKANSLCVEITETVI-ERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDS 704 GL L +E+TETV+ +R++E + ++ LR GVRISIDDFGTG S+L + D+ Sbjct: 731 GLPPQYLELELTETVLMQRVDEVVAV-LKSLRAMGVRISIDDFGTGYSSLSYLKRMPIDA 789 Query: 705 IKVDSQFTGDIFGTAGK-------IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCV 757 +KVD F DIF K IV I +LA ++ IAEGVE+ + A L GC Sbjct: 790 LKVDRSFVNDIFDGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGVETPEQAEFLRSKGCD 849 Query: 758 QAQGYLYQKPM 768 + QGYL +P+ Sbjct: 850 EVQGYLISRPV 860 >UniRef50_B1XYJ0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XYJ0_LEPCP Length = 1083 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 118/451 (26%), Positives = 204/451 (45%), Gaps = 28/451 (6%) Query: 342 DAKEIISIKNSIAEMKDA--EIERSNKLLSLISYDQESGFIKNMAIIE---------SNN 390 DA E+ ++ +M A I + +L+ L YD +G + E Sbjct: 626 DADEMKLLRELAGDMSFALEHIAQQERLVHLAYYDLLTGLANSTLFHERLERHVEAACAV 685 Query: 391 NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLL--- 447 Q +AV ++ L + + G + +++++ +R+ + I +AD + + Sbjct: 686 RQKVAVALVDLVRFKMINDTLGRHAGDALLKRVAERLLDCVGDHAQIARVSADRFAVVFA 745 Query: 448 -------LCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKL 500 L R +T + DS + ++ + P G NA + + Sbjct: 746 DVRAEADLARVFATQYTECFGLPFTIDSQDLLVSAKVGIA--LYPDDGGNAETLFRNAEA 803 Query: 501 AISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILG 560 A+ + + +F + + E + I +R A+E G+ L YQP VD+++R I+ Sbjct: 804 AVKNAKS-AADTVLFYNPRMSATVAETLAIENRLRQALEQGQFVLHYQPKVDLDSRRIVS 862 Query: 561 AEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLL 620 EAL RW S E G++ PLKFI + E+ G I +G ++ A + +H+ + + Sbjct: 863 VEALLRWQSPELGLVPPLKFIPLLEETGQILAVGDWALRCAARDHKHWRELGLPAPR--I 920 Query: 621 HINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGV 680 +NVS QL+ F ++E G + + +EITET++ + E + LR GV Sbjct: 921 AVNVSAIQLHRDDFVAALALALQEEGGQPAGIDIEITETIVMQDVEASVAKLHALRAMGV 980 Query: 681 RISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIPVI 738 ++IDDFGTG S+L + +K+D F + +V + LA R+ VI Sbjct: 981 DVAIDDFGTGYSSLAYLSRLPVQLLKIDRAFVDTMLSDPNNMILVSTMISLAHSLRMKVI 1040 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 AEGVE+E+ A+ L L C Q QGYL +P+P Sbjct: 1041 AEGVETEEQAKILQLLRCDQMQGYLVSRPVP 1071 >UniRef50_Q21L06 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Alteromonadales RepID=Q21L06_SACD2 Length = 746 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 102/398 (25%), Positives = 197/398 (49%), Gaps = 15/398 (3%) Query: 385 IIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 ++E ++ L + ++ + + A G D ++++R++ R+ + C + AD+ Sbjct: 342 LVEDDSLPELYLALVDIDNFAELNAALGKDYCDELLREIGLRLLNNFPVTCTVARIAADV 401 Query: 445 YLLLCRENVQTFTRKIAMVNDFDSSFGYRN----LRIHKSAICEPLQGENAWSYAEKLKL 500 + +L ++ + +A+ F+ F R+ L + + E ++ + Sbjct: 402 FAVLGPKD---HVKPMAISEVFNKPFKVRDNDQVLSVTSGIVPLTEMSEGGGQAIKEGSI 458 Query: 501 AISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILG 560 + S + E + + + + +++ + R +R A + G+L+L YQP DI T ++G Sbjct: 459 VLKSAKAIRRGEVVMFNRKMVEKATQHVEMLRELREAFDSGKLYLAYQPKFDIKTLDVVG 518 Query: 561 AEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLL 620 EAL RW + ++ P +FI +AE G I +G +++ A+ E R+S +D + Sbjct: 519 LEALLRWENKHGVMVPPQRFIPLAEKSGLIVRMGEWVMENAIAELHKV--RSSGWNDLKM 576 Query: 621 HINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETV-IERINEHFYLNIEQLRKQG 679 +N S QL P + ++ + N + +EITET+ ++ + + + + +++ G Sbjct: 577 GVNFSVAQLRHPEILDALRELIDRVQVDPNLVDLEITETIAMDDVKGNMEV-LTRIKDIG 635 Query: 680 VRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG-KIVRIIFDLARYNRIPVI 738 +S+DDFGTG S+L ++ D++KVD F +G KIV +I +L + + VI Sbjct: 636 FELSVDDFGTGFSSLSYLQKMPFDNLKVDQSFVQTSDTPSGRKIVEMIVNLGQTLGMNVI 695 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPMP---FSAW 773 AEGVE+ + L +LGC Q QGYL KPM + W Sbjct: 696 AEGVETREQLDLLRELGCQQVQGYLLAKPMSCDELTTW 733 >UniRef50_Q2YZH5 Putative uncharacterized protein n=1 Tax=uncultured gamma proteobacterium RepID=Q2YZH5_9GAMM Length = 650 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 107/382 (28%), Positives = 182/382 (47%), Gaps = 16/382 (4%) Query: 398 IIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE----NV 453 +I + L+ + G + + ++ + QR+ I F + + ++ N+ Sbjct: 243 LIDIEALKDINDSLGHENGDILLNLISQRLKGSLRSSDHIGRFGGNKFAVILNHTETGNI 302 Query: 454 QTFTRKIAMVNDFDSSFGYRNLRIHKSAICE----PLQGENAWSYAEKLKLAISSIRDHM 509 + + K ++ +F+++F N ++ AI P +N+ +K + A+ R M Sbjct: 303 EAISNK--LLENFEATFEINNHSLYVRAILGISIFPSHADNSQVLIQKAETALHKARK-M 359 Query: 510 FSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVS 569 +F D + + + + ++R A+ L L YQP +DI + I EAL RW+ Sbjct: 360 ALDFAIYDTSLDKNNADRLRLTHDLRGAIHNDALKLYYQPQLDIRSGTIKSVEALARWIH 419 Query: 570 AERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQL 629 +G I P FI IAE G I L +++TA+ R ++ + + +N+S L Sbjct: 420 PTQGFIPPDVFIEIAEHAGLIQSLTDWVLRTAI---RQSAEWQKIGLHITVSVNLSARNL 476 Query: 630 NEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGT 689 ++ + + ++ +K LC+EITET + EH ++ L GVRISIDDFGT Sbjct: 477 HDETLGTQVSNLLNYWNVKPEQLCLEITETSMMADPEHARTVLDGLDNLGVRISIDDFGT 536 Query: 690 GLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNRIPVIAEGVESEDV 747 G S+L ++ D +KVD F ++ + IVR LA + V+AEGVE + Sbjct: 537 GYSSLAYLKQLPVDELKVDKSFVLNMSNDESDASIVRATVSLAHDLGLEVVAEGVEDQAA 596 Query: 748 ARELIKLGCVQAQGYLYQKPMP 769 EL KLGC QGY + +PMP Sbjct: 597 QDELQKLGCELIQGYHFARPMP 618 >UniRef50_B9K4C5 GGDEF family protein n=1 Tax=Agrobacterium vitis S4 RepID=B9K4C5_AGRVS Length = 542 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 90/289 (31%), Positives = 151/289 (52%), Gaps = 11/289 (3%) Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGE-L 543 P+ G+ S + +A+ + + + + I++ + + +R ++ + + Sbjct: 242 PIHGDTGESLLARADIALYAAKAAGKGTHRTFSENMESRIQKRVRLCAKLRTSLATRQGM 301 Query: 544 FLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMG 603 F+ YQPI+D +T+ I EAL RW+ ERG ISP +F+ IAE+ G I++LG ++ TA Sbjct: 302 FVFYQPIIDAHTKKITAREALVRWLHPERGWISPAEFVPIAEESGLIDQLGDFVLNTACL 361 Query: 604 EFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIER 663 + +S A + +NVS QL + + +GL L +E+TET + Sbjct: 362 DAAGWSDAARVA------VNVSAAQLGKGTIASAILAALTRSGLSPYRLEIEVTETAM-L 414 Query: 664 INEHFYL-NIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAG 720 +EH + ++ ++R GVR+++DDFGTG S+L D IK+D F D + Sbjct: 415 YDEHGVIGDLRRIRDMGVRVALDDFGTGYSSLTHLRAFPFDKIKIDGSFVKDAVERPESA 474 Query: 721 KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 IVR I DL + + +AEGVE+E +++ GC + QGY Y KP+P Sbjct: 475 AIVRAIADLGKRLGVTTVAEGVETEAHLIRVLEEGCTEVQGYFYGKPVP 523 >UniRef50_Q1YF74 Possible signaling protein with EAL, GGDEF domains n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YF74_MOBAS Length = 808 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 86/240 (35%), Positives = 130/240 (54%), Gaps = 12/240 (5%) Query: 537 AMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQ 596 A++ G+ L YQP+ ++ TR ++G EAL RW G++ P++FI +AE+ G I E+G Sbjct: 551 ALKEGQFSLNYQPLFNLPTRELVGFEALIRWNHPTLGLVPPVEFIPLAEETGLITEIGEW 610 Query: 597 IIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEI 656 ++ A E H+ + + +NVSP QL++ + T + E+GL A L +E+ Sbjct: 611 VLNEACREASHW------PGELYVSVNVSPVQLHKTDMLRQVTRALAEHGLTAQRLELEL 664 Query: 657 TETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQF----T 712 TET + + LR GVRI++DDFGTG S+L E + D IK+D F Sbjct: 665 TETAMVDDGRRINATLTALRSLGVRIAMDDFGTGYSSLAHLREFDLDRIKIDRSFIDSAP 724 Query: 713 GDIFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 D+ A ++R + +A+ I EGVESE+ L+ LGC AQGYL +PM A Sbjct: 725 DDVSSLA--VLRAVTMMAKDLSIATTGEGVESEEQLARLLDLGCGTAQGYLLGRPMTAEA 782 >UniRef50_Q21UE9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Comamonadaceae RepID=Q21UE9_RHOFD Length = 1114 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 81/240 (33%), Positives = 134/240 (55%), Gaps = 4/240 (1%) Query: 534 IRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINEL 593 +RH + EL L YQP+VD + R ++G EAL RW +RG+++PL FI +AE G I L Sbjct: 869 LRHGLARDELVLFYQPVVDQDAR-VVGVEALVRWQHPQRGLVAPLAFIPMAEQTGLILPL 927 Query: 594 GYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLC 653 G +++ A + +S +A+ + + +NVS Q +P F ++ T++++ G L Sbjct: 928 GQWVLRVACLQLVSWSAQAA-TERLTMAVNVSARQFRQPEFVQQVLTMLRQTGANPKRLK 986 Query: 654 VEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTG 713 +E+TE+++ + + +LR GVR S+DDFGTG S+L + +K+D F Sbjct: 987 MELTESLLLTDTQDAIAKMSELRDVGVRFSLDDFGTGYSSLSYLKLLPLQQLKIDQSFVR 1046 Query: 714 DIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFS 771 D+ I R + L + + V+AEGVE+ L++ GC + QGYL+ KP+P + Sbjct: 1047 DVLTDPNDAAIARTVLALGQSLGLGVVAEGVETVGQRDFLLQHGCTRFQGYLFGKPVPIA 1106 >UniRef50_A6G7D3 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G7D3_9DELT Length = 696 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 90/285 (31%), Positives = 147/285 (51%), Gaps = 7/285 (2%) Query: 500 LAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAIL 559 +A S + H S+ D E + +R A+ + + YQPIV + + + Sbjct: 411 VATSRAKRHGKSQSSTFDKTMRQEALNTLRTQMQLREAIVRQQFEVYYQPIVSLASSKLT 470 Query: 560 GAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFL 619 G EAL RW +RGII P++FI +AE+ G I +G ++K A + + + D Sbjct: 471 GFEALVRWNHPKRGIIGPIEFIALAEETGLIVPIGQFVLKQACTQMAAWHAKYDEAKDVS 530 Query: 620 LHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQG 679 + +N+S QLN P ++ E L +++ +E+TE+ + +++LR +G Sbjct: 531 ISVNLSGHQLNSPTLVAEIEAVLAETALPPSAVKLELTESTLIDDPTSAQRILKRLRDRG 590 Query: 680 VRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG---TAGKIVRIIFDLARYNRIP 736 +++ IDDFGTG S+L + D +K+D F D+ G IV I LA + Sbjct: 591 IQLYIDDFGTGYSSLSYLHRFAIDGLKIDKSFV-DMVGRDDRKAAIVPSIVGLAHNLGVG 649 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVK 781 V+AEGVE+ D A+ L L C +AQGYLY +P+P D++ KL++ Sbjct: 650 VVAEGVETRDQAQTLALLDCAEAQGYLYSRPVP---QDQAAKLIE 691 >UniRef50_B6R112 Putative uncharacterized protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R112_9RHOB Length = 698 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 93/285 (32%), Positives = 143/285 (50%), Gaps = 6/285 (2%) Query: 481 AICE-PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAME 539 +C P G + + K LA+ +D F D + E EE + + +R A+ Sbjct: 385 GVCTYPEHGVDLDTLMRKADLAMYKAKDLGRDRICFFDISMSREAEERVSLETALRQALR 444 Query: 540 IGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIK 599 EL + YQP V + T I+GAE L RW RG++S FI IAE+ G I+E+G + + Sbjct: 445 NKELAVHYQPRVCVATNRIVGAEGLLRWHHPTRGLVSAASFIEIAEEAGMIDEIGDWVAR 504 Query: 600 TAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITET 659 AM + + ++Q D + IN+SP Q +R I+ E G A S+ +EITE+ Sbjct: 505 EAMLQQKQWAQAGH---DIAISINLSPAQFRRGRISQRLHRILIETGASARSIRLEITES 561 Query: 660 VIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA 719 + + LR G + IDDFGTG SNL ++K+D F D Sbjct: 562 ALLSDANETLKELNALRDLGFTLEIDDFGTGYSNLGYLQRYPVTALKIDRSFIADT--KR 619 Query: 720 GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLY 764 IV++I + R + ++AEG+E+++ R++ KL C + QGYLY Sbjct: 620 WPIVQMIVQMGRLLNLTLVAEGIETKEQLRQIQKLQCHEFQGYLY 664 >UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHS3_CELJU Length = 856 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 86/237 (36%), Positives = 126/237 (53%), Gaps = 4/237 (1%) Query: 534 IRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINEL 593 IR A+ + L YQP VD R I GAEAL RW+ ERG+ISP+ FI IAE+ G I L Sbjct: 615 IREALLFNQFKLYYQPQVDRTGR-ITGAEALIRWLHPERGMISPMDFIPIAEESGLILPL 673 Query: 594 GYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLC 653 G I+ A + H+ Q L L INVS Q +P F + + G + L Sbjct: 674 GNWILDAACQQLIHWKQN-PLTAALTLSINVSARQFQQPDFVTQVLAAVTRTGANPHQLT 732 Query: 654 VEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTG 713 +E+TE+++ + ++ L+ G++ S+DDFGTG S+L + + +K+D F Sbjct: 733 LELTESILATNQQDIITKMDALKSHGIKFSLDDFGTGYSSLSYLKRLPINELKIDKSFVN 792 Query: 714 DIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 DI I R++ LA+ + VIAEGVE++ L + GC+ QGY + KP+ Sbjct: 793 DILTDPNDAAIARMVIRLAQSMELNVIAEGVETQRQRDWLEQEGCLHYQGYYFGKPV 849 >UniRef50_A4JQX8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JQX8_BURVG Length = 913 Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 108/369 (29%), Positives = 173/369 (46%), Gaps = 16/369 (4%) Query: 411 FGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYL-LLCR----ENVQTFTRKIAMVND 465 G ++++R++ QR++ + + + D ++ +L R + + R+IA + Sbjct: 534 LGHGAGDRLLREVAQRLSGCVGEDGTVTRYGGDEFVAMLGRPDDGDRLAALLRRIARALE 593 Query: 466 FDSSFGYRNLRIHKS--AICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNE 523 G R+ S C P G +A + + LA+ + + + Sbjct: 594 RPVQIGDAQSRVQLSIGVACYPADGLDAETLLKHADLAMYQAKARGRNTVELFKPSFAEA 653 Query: 524 IEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITI 583 E I ++ +R A+E L YQP +D+ T + G EAL RW AE G +SP FI + Sbjct: 654 AERRIALSHRLRAALEHDGFELAYQPQIDVRTSRVSGVEALLRWHDAEMGTVSPAIFIPL 713 Query: 584 AEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMK 643 AEDIG I +LG ++++ G+ + + A + +NVSP QL F ++ Sbjct: 714 AEDIGLIGQLGEWVLRSVCGQAKRW---ADTLPALRVSVNVSPRQLASGDFCSVVRRVLD 770 Query: 644 ENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPD 703 +GL A+ L +EITE + + + L + GV I+IDDFGTG S+L + D Sbjct: 771 ASGLPAHQLELEITEGAL--VAPGALPALRALNEIGVLIAIDDFGTGYSSLSYLRTFHAD 828 Query: 704 SIKVDSQFTGDIFGTAG---KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQ 760 +K+D F I GT I+R I LAR V+AEGVE D L+ GC Q Sbjct: 829 RLKIDMSFVRGI-GTHCADEAIIRAILALARSLHFEVVAEGVERPDQLSFLVAEGCPIVQ 887 Query: 761 GYLYQKPMP 769 GY + + +P Sbjct: 888 GYHFCRAVP 896 >UniRef50_A4SJC3 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4SJC3_AERS4 Length = 667 Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 113/443 (25%), Positives = 209/443 (47%), Gaps = 26/443 (5%) Query: 340 EGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNN---QYLAV 396 EG++ I+++ I ++ + + + YD +G +K ++++ + + ++ Sbjct: 225 EGNSLGILTLSRDITGLRTTQAQLQQEQ----HYDSLTGLLKLSHFLQTSRHLGARKASL 280 Query: 397 GIIKLCGLEAVEAVFGVDERNKIVRKLCQRI---AEKYAQCCDIVTFNADLYLLLCRENV 453 ++ L + FG+ ++++ ++ +R+ A + C + + + L E + Sbjct: 281 LLVDLQHFREINDRFGIRVADRLLSQVARRLQQLARPQSLVCRVAADDFAMLLPELSEPL 340 Query: 454 QTFTRKIAMVNDFDSSFGYRNLRIHKSAICEPLQG-----ENAWSYAEKLKLAISSIRDH 508 ++R++ N+ + RI G E S+AE LA + Sbjct: 341 ADWSRRLQ--NELMVPYQIEEHRIQIPVFLGIAHGRANDAERLLSHAEA-ALAQGKRQQQ 397 Query: 509 MFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWV 568 + F DAKL + IA + A++ G+L VYQPI+ + GAE LCRW Sbjct: 398 HCTLFDPELDAKLKRRQ---LIAAQLPLAIKSGQLTAVYQPIISTRNNQLHGAELLCRWP 454 Query: 569 SAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQ 628 E G+ISP +FI +AE++G I +LG ++++ + + A D +L IN+SP Q Sbjct: 455 HPELGMISPDEFIPLAEELGLIGQLGQRMLEQGCAQLARWQGAAP---DLVLSINLSPLQ 511 Query: 629 LNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFG 688 +P + ++ +GL L +EITE V+ + N+ L + G +++IDDFG Sbjct: 512 FRDPDLCPQIFACIERHGLAPWQLELEITEGVLMENADEIESNLANLIEAGFQLAIDDFG 571 Query: 689 TGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIPVIAEGVESED 746 TG +L + ++K+D FT + IVR + L I + AEGVE+ + Sbjct: 572 TGYCSLAYLPRLQVATLKLDRSFTQGLATNQATTAIVRSVIGLGHELGIRITAEGVETPE 631 Query: 747 VARELIKLGCVQAQGYLYQKPMP 769 L++ GC + QGYL+ +P+P Sbjct: 632 QQAWLVQAGCDRLQGYLFSRPLP 654 >UniRef50_B7KGZ9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGZ9_CYAP7 Length = 897 Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 89/246 (36%), Positives = 135/246 (54%), Gaps = 4/246 (1%) Query: 526 ENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAE 585 + + + ++R A+E EL + YQPI+ + ++G EAL RW + G+ISP +FI IAE Sbjct: 637 KQLQLENDLRRAIERDELVVYYQPIICLKNGTLIGVEALVRWQHPQEGMISPAEFIPIAE 696 Query: 586 DIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKEN 645 + G I EL ++ TA + R + ++ S L +N+S Q ++P + I+ +N Sbjct: 697 ETGLIIELDQWVLNTACQQMRFWQEKYSDFKSITLSVNLSGRQFSQPDLIKNIDNILTQN 756 Query: 646 GLKANSLCVEITETV-IERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDS 704 L+ L +EITETV IE N + +EQL ++ V + +DDFGTG S+L + D Sbjct: 757 KLEKQYLKLEITETVLIENPNSAAEM-LEQLIERKVTVCLDDFGTGYSSLGYLHRFPLDV 815 Query: 705 IKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGY 762 +K+D F +I I+R I LAR I VIAEG+E+E L LGC QGY Sbjct: 816 LKIDRSFVSNIETNTSNSTIIRTIITLARELEIEVIAEGIETEQQREFLQSLGCHYGQGY 875 Query: 763 LYQKPM 768 + P+ Sbjct: 876 WFSPPV 881 >UniRef50_B5VW83 Diguanylate cyclase/phosphodiesterase n=4 Tax=Arthrospira RepID=B5VW83_SPIMA Length = 655 Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 84/236 (35%), Positives = 126/236 (53%), Gaps = 2/236 (0%) Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 ++RHA+E EL L YQPI+ + T I+G EAL RW +RG +SP +FI IAE+ G I Sbjct: 364 DLRHAIERQELQLHYQPIISLETLEIIGCEALIRWEHPKRGWVSPSQFIPIAEETGLIQP 423 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 +G ++++A + + +N+S +QL P + TI++E G L Sbjct: 424 IGEWVLRSACETLHRWQLMFPQGKQPFMSVNLSTYQLTNPQLVNKVQTILEETGCDPCRL 483 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +E+TE+ I E + +L + G+++ IDDFGTG S+L R Y ++K+D F Sbjct: 484 KLELTESTIAEYAEVVVPQMRELSELGIKLCIDDFGTGYSSLSRLYHFPIHTLKIDRSFI 543 Query: 713 GDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQK 766 I + KI I +LA + VIAEGVE+ + L GC QGYL+ K Sbjct: 544 EGIDESQDQLKIAYAIVNLAHTLGLEVIAEGVETPEQMAVLQAWGCQLCQGYLFSK 599 >UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium RepID=B0UQT2_METS4 Length = 797 Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 91/240 (37%), Positives = 128/240 (53%), Gaps = 10/240 (4%) Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 ++R A+ E L +QP VD T GAEAL RW ERG++SP +FI +AE+ G I Sbjct: 549 DLRRALARQEFELYFQPQVDARTGRFDGAEALIRWHHPERGLVSPGEFIPLAEETGLIGP 608 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 LG +++TA E R ++ + +N+SP Q +P I+ E GL + L Sbjct: 609 LGEWVLRTACAEARRWAT------PLPVAVNLSPVQFRDPRLAATVRGILAETGLPGSRL 662 Query: 653 CVEITETVIERINEHFYLNI-EQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQF 711 +EITE + + +EH L + +LR G+RIS+DDFGTG S+L D IK+D F Sbjct: 663 EIEITEGTLMQ-DEHRTLAVLTELRGLGIRISMDDFGTGYSSLSYLRRFPFDKIKIDQSF 721 Query: 712 TGDIFG--TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 + IVR I L R I AEGVE++ + + GC Q QGYLY +P+P Sbjct: 722 VRQTPQDRDSVAIVRAIAMLGRSLGIKTTAEGVETDQQSVFIAGEGCDQLQGYLYSRPVP 781 >UniRef50_A4VKZ2 Sensory box protein/GGDEF domain protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VKZ2_PSEU5 Length = 886 Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 126/460 (27%), Positives = 214/460 (46%), Gaps = 29/460 (6%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGF---------IKNM 383 I A++ G+ ++ I + K AE ++ +L YD +G + Sbjct: 413 ISAVRNVHGEVTHYVAAFTDITDRKAAE----ERIHNLAFYDPLTGLPNRRLLLDRLHQA 468 Query: 384 AIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + +NQ A+ I L + + + G ++++R +R+ + + D Sbjct: 469 MAVSRRSNQLGALMFIDLDNFKNINDLHGHQTGDQVLRVAAERLHAEVRASDMVARLGGD 528 Query: 444 LYLLLC--------RENVQTFTRKIAMVNDFDSSFGYRNLRIHKSA-ICEPLQGENAWSY 494 ++++ R Q + ++N D S+ L ++ SA I L G A S Sbjct: 529 EFVVMLENLGDDPLRAAAQAEHIGMKLLNSLDRSYRLNELGLYSSASIGVVLFGGEACSS 588 Query: 495 AEKLKLAISSIRDHMFS---EFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIV 551 E +K A S+ + S F D ++E + + IR ++ GE L +QP + Sbjct: 589 DELMKRADMSMYEAKISGKNALRFFDPRMQLAVQERLRLEAGIRQGLKNGEFVLSFQPQL 648 Query: 552 DINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQR 611 + N ++GAEAL RW +RG++SP FI AE G I+ L Q+++ A G+ ++ Sbjct: 649 EQNA-GVIGAEALVRWQHPQRGLLSPAAFIAQAEHAGLIHALDLQVLQQACGQLARWAAT 707 Query: 612 ASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLN 671 + D L +N+S L + HF E+ +++ +G L +E+TET++ Sbjct: 708 PAFAD-LTLSVNLSAHLLYQDHFVEKLLDLLERSGANPARLKLELTETLLLDNMPEAIAR 766 Query: 672 IEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDL 729 + +L++ G+R SIDDFGTG S++ ++ D +K+D F + A IVR I L Sbjct: 767 MTRLKQHGIRFSIDDFGTGYSSMSYLQQLPLDELKIDQTFIRRLPDDASSLTIVRAICAL 826 Query: 730 ARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 A + VIAEGVES L+ GC + QGYL+ KPMP Sbjct: 827 ASGLGLEVIAEGVESGAQRSVLLGNGCHRFQGYLFGKPMP 866 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 125/457 (27%), Positives = 207/457 (45%), Gaps = 29/457 (6%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGF---------IKNM 383 I +K +G ++IK I E K AE N L +DQ +G +K Sbjct: 487 ITPVKQADGKITNYVAIKEDITEKKKAEAYTEN----LAYFDQLTGLPNRRMLQAQVKYR 542 Query: 384 AIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + +N+Q L V + L + + G ++++ K+ +RI + + + D Sbjct: 543 LNMAQSNHQPLTVMFLDLDNFKNINDSLGHTVGDQVLIKIAKRIKKAIREVDTVSRLGGD 602 Query: 444 LYLLLCRENVQTFTRKIA--MVNDFD--SSFGYRNLRIHKSA--ICEPLQGENAWSYAEK 497 +++L IA ++ + S + L I S P G + + + Sbjct: 603 EFIMLFPNTDANAAMHIATTLIQEISKASVVEHNELTITPSIGIAIYPNDGNDFKTLLKN 662 Query: 498 LKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 + A+ +++ + F F N+ + +RHA++ EL L YQP + + Sbjct: 663 AETAMYRVKNDSRNGFHFVTPEMQLSASRNLQLENALRHALKRNELQLYYQPQISTSNGQ 722 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 I+GAEAL RW E G+ISP +FI IAE G I E+G +++TA+ + +++ + D Sbjct: 723 IIGAEALLRWHHPELGMISPAEFIPIAESSGQIIEIGEWVLRTAIRQTKNW-----MDDG 777 Query: 618 F---LLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 F ++ +N+S Q + + T I+ E L L +E+TE V E + Sbjct: 778 FTPMIIAVNLSVVQFRQKNLLTLITDILAEVQLPNEYLELELTEAVTMHDPESVINVMNT 837 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARY 732 +QG+R+SIDDFGTG S+L + +K+D F DI IV I D+A Sbjct: 838 FHEQGIRMSIDDFGTGYSSLSYLKKFKVYKLKIDQSFIRDISNDPDDRAIVSAIIDMASN 897 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 + IAEGVE+ + L GC + QGY + KP+P Sbjct: 898 LGLQTIAEGVETAEQLAFLRLHGCHEVQGYYFSKPLP 934 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 82/250 (32%), Positives = 136/250 (54%), Gaps = 4/250 (1%) Query: 522 NEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFI 581 + ++E I + + A+++G+ L YQP +D+ + I+GAEAL RW E+G+ISP FI Sbjct: 671 DSLKERISLENALNQALKLGQFELYYQPQLDVKSNRIIGAEALIRWNHPEKGMISPDAFI 730 Query: 582 TIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTI 641 +AE+ G I ++G ++ A + + ++ D + +N+S Q+ + F + Sbjct: 731 PLAEESGLIVDIGSWVLHQASSQLAQWRKQGF--DQLSVSVNLSALQVQKESFAREVADV 788 Query: 642 MKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEIN 701 ++E G+ L +E+TE++I R E ++++ G++IS+DDFGTG S+L Sbjct: 789 IREYGVPEACLDLELTESMIMRNAEETIAALDKIHNLGIQISVDDFGTGYSSLSYLKRFP 848 Query: 702 PDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQA 759 D +K+D F DI I + I +A + VIAEGVE+ L GC Q Sbjct: 849 LDKLKIDRSFVQDITVDTDDAMICKTIISMAHNLNLQVIAEGVETNAQLELLRDYGCEQY 908 Query: 760 QGYLYQKPMP 769 QGYL+ KP+P Sbjct: 909 QGYLFAKPLP 918 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 123/454 (27%), Positives = 206/454 (45%), Gaps = 25/454 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGF---------IKNM 383 I +K EG +++K I E K + L +YD +G +K Sbjct: 871 ISPIKNAEGIITHFVAVKEDITERK----AQQTTLTYQANYDALTGLPNRFLAIDRLKQA 926 Query: 384 AIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + + +AV I L + V G + + +++K+ QR+ + + + D Sbjct: 927 ILQADRQKKRVAVMFIDLDHFKDVNDTLGHEYGDLLLQKVSQRLKQCLRKSDTVARLGGD 986 Query: 444 LYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICE-------PLQGENAWSYAE 496 +L++ +T K+ S NL ++ I P G + Sbjct: 987 EFLIILPNLRETHHCKLIASKILSSLEKPFNLLTEEAFISASIGITLYPDDGNDVSVLMR 1046 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 A+ + ++F F E + + I + +R+A++ E +LVYQPI+D+ + Sbjct: 1047 NADAAMYLGKRGGRNDFKFYTMGMNEEAQSRLRIEKLLRYALKKNEFYLVYQPIIDLRFQ 1106 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 ++GAEAL RW + E G +SP +FI+IAE+ G I+ELG +I A E ++ + S Sbjct: 1107 TVIGAEALLRWNNPELGRVSPDQFISIAEETGLISELGAWVISQACQEVVNWQTQGS--- 1163 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +N+SP Q E E + + NG+ + L +EITE ++ IEQL Sbjct: 1164 PIWVAVNLSPRQFRESKLLEIISNAITLNGITNHYLELEITEKLLLEDFPGSKGIIEQLH 1223 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNR 734 + R+SIDDFGTG S L + + +K+D F DI +V+ I + + Sbjct: 1224 EMDFRLSIDDFGTGYSALSYLIKFPFNRLKIDRSFIADIPHNQEVLALVKTIIAMGHGLK 1283 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 + VIAEGVE+ + A L GC AQGY + +P+ Sbjct: 1284 LQVIAEGVETTEQANILEAEGCDYAQGYFFSRPL 1317 >UniRef50_Q0G4W7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G4W7_9RHIZ Length = 489 Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 103/368 (27%), Positives = 178/368 (48%), Gaps = 17/368 (4%) Query: 412 GVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL-----CRENVQTFTRKIAMVNDF 466 G + ++++R +RI E C D + + E + ++++++ Sbjct: 96 GHEGGDQLLRAFSERILEAVGPECLFARLGGDEFAIAMFGEEAEERSREMASRLSVLSKK 155 Query: 467 DSSFGYRNLRIHKSAICEPLQGEN---AWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNE 523 R L + S+I G N + + +A+ + +++ S F D++ Sbjct: 156 PYECAGRTL-VATSSIGGVACGGNLADVPAIMRRADIALYNAKENKRSAACFYDESMELV 214 Query: 524 IEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITI 583 + + + R++RHA+E GEL L +QPIVD+ ++ EAL RW RG +SP +FI I Sbjct: 215 VTKRAALMRDLRHAVEKGELVLHFQPIVDLADSKLVSFEALLRWRHPSRGFVSPGEFIPI 274 Query: 584 AEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMK 643 AE+ G I +G +I+ A S A+ + IN+SP Q ++ ++ Sbjct: 275 AEESGLILPIGLWVIEEAC------SVAATWPEHIRFAINLSPRQFSDERLIPTVLGALE 328 Query: 644 ENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPD 703 +NG+ L VE+TET I + + +LR +GV+I++DDFGTG ++L + D Sbjct: 329 KNGVGPARLTVELTETAIIEHDGKALAALRKLRSEGVKIALDDFGTGFASLSYLTKFPFD 388 Query: 704 SIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQG 761 +K+D F + A ++ I DLA + +AEG+ES D + K GC + QG Sbjct: 389 VVKIDQSFVREASRNNNADVVISSICDLAARLGLDTVAEGIESLDHLELVRKAGCNRGQG 448 Query: 762 YLYQKPMP 769 YL+ +P P Sbjct: 449 YLFGRPEP 456 >UniRef50_B8INP3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=2 Tax=Proteobacteria RepID=B8INP3_METNO Length = 794 Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 89/239 (37%), Positives = 127/239 (53%), Gaps = 8/239 (3%) Query: 534 IRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINEL 593 +RHA+ GE+ LVYQP + T ++G E L RW ERG +SP FI IAE+ G I ++ Sbjct: 541 LRHAVARGEMHLVYQPQTQVETGEVIGFEVLLRWHHPERGAVSPAVFIPIAEESGAILQI 600 Query: 594 GYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLC 653 G +++ A AS + + +NVS Q++ PHF + ++ + GLK + L Sbjct: 601 GEWVLRQAC------RDAASWPNPLAVAVNVSAVQIHAPHFVQLVHEVLLQTGLKPDRLE 654 Query: 654 VEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQF-- 711 +EITET + R + Q++ GV I++DDFGTG S+L D IK+D F Sbjct: 655 IEITETALIRDPVRALSTLRQVKALGVHIAMDDFGTGYSSLSNLRSFPFDKIKIDPSFIR 714 Query: 712 TGDIFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPF 770 D IVR + L R +PV+AEGVE++ R L C AQGYL +P P Sbjct: 715 AVDTNEQTAAIVRSVLGLGRGLGLPVLAEGVETDAELRFLAAENCDAAQGYLMGRPAPI 773 >UniRef50_Q07VI3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=10 Tax=Bradyrhizobiaceae RepID=Q07VI3_RHOP5 Length = 750 Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 113/426 (26%), Positives = 192/426 (45%), Gaps = 17/426 (3%) Query: 354 AEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGV 413 AEM+ A + + + L L + + + M + + + +A+ + + +AV G Sbjct: 305 AEMRLAFMTQHDSLTGLPNRNSLRKKLDQMLVSSRRSTEKIALHFLGIDNFKAVNDSLGH 364 Query: 414 DERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYR 473 +K++R + +R+ + I N+D + +L + VQ + + + G Sbjct: 365 AVGDKLLRSISRRLRSTLREEDVIGRLNSDEFAIL-QSGVQNPEDVVLLAKRLLHAIGEP 423 Query: 474 NLRIHKSAICE--------PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIE 525 + S + P G+++ +A+S ++ + F + + Sbjct: 424 FILEGHSLVVSASMGIAMVPTDGDDSEKLFMSADMALSKAKNEARGSYSFFEPGMDARAQ 483 Query: 526 ENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAE 585 I +R A++ L YQP++ +N+ I G EAL RW ERG++SP +FI +AE Sbjct: 484 TRRKIEFELRQAIQHDVLRPHYQPLIGLNSGRITGCEALVRWPHPERGLVSPAEFIPVAE 543 Query: 586 DIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKEN 645 + G IN LG Q+++ A + A+ DD + IN+SP Q + +K++ Sbjct: 544 ETGLINPLGTQVLRRACLDA------AAWPDDVRIAINLSPLQFRVGNLLSVVMDALKQS 597 Query: 646 GLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSI 705 GL L +EITET++ + + LR G RIS+DDFGTG S+L D I Sbjct: 598 GLSPKRLELEITETLLLEKSSQVIATLHALRALGARISMDDFGTGYSSLSYLRSFPFDKI 657 Query: 706 KVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYL 763 K+D F + IVR I L + + AEGVE+E L GC +AQG+L Sbjct: 658 KIDQSFVRGVCDNRELQAIVRSIISLGMGLGVTITAEGVETEAELNWLRAEGCHEAQGFL 717 Query: 764 YQKPMP 769 + P Sbjct: 718 FSPARP 723 >UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Comamonadaceae RepID=A1WHK4_VEREI Length = 836 Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 133/242 (54%), Gaps = 4/242 (1%) Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 ++R ++ EL L YQP+VD R + GAEAL RW +RG++ P +F +AE G I Sbjct: 581 DLRRGLQQRELVLHYQPMVDGQGR-LQGAEALVRWNHPQRGLMPPAEFTPLAEQTGLILP 639 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 LG +++TA + +S R++L F L +NVS Q + F ++ ++ +G L Sbjct: 640 LGQWVLETACAQLVAWS-RSALTRAFSLSVNVSVRQFRQADFVQQLLATLEASGANPERL 698 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +E+TE+++ + ++QLR G+ ++DDFGTG S+L + + D IK+D F Sbjct: 699 TIELTESLLLNDVQDIIARMQQLRCHGLGFALDDFGTGYSSLSQLKRLPLDQIKIDRSFV 758 Query: 713 GDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPF 770 D+ A G IVR I LA+ + V+AEGVE+ L GC QGY + +PMP Sbjct: 759 RDLPADAGDGAIVRSILALAQSLGLAVVAEGVETRAQLEFLQHHGCQTFQGYHFGRPMPP 818 Query: 771 SA 772 A Sbjct: 819 EA 820 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 89/287 (31%), Positives = 149/287 (51%), Gaps = 4/287 (1%) Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELF 544 P+ G +A + + A+ + H + F F E I I +R A+++ +L Sbjct: 398 PVDGVDAEALLKNAATAMHQAKQHGSNNFRFFSKGMNRMAWERIEIETGLRRALDLQQLA 457 Query: 545 LVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGE 604 L YQP VD+ T I+G EAL RW S E G +SP++FI +AE+ G I +G ++++A + Sbjct: 458 LHYQPQVDLKTGHIIGMEALLRWESPELGRVSPMRFIPLAEETGLILPIGNWVLESACRQ 517 Query: 605 FRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERI 664 + + RA + +N+S Q + F +R I++ +G+ L +E+TE++I Sbjct: 518 AKAW-HRAGFP-SLRMAVNISARQFKQAGFIDRLDAIIQRSGINPELLEMELTESLIMEK 575 Query: 665 NEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKI 722 ++ + + ++ +G++++IDDFGTG S L D IKVD F DI I Sbjct: 576 SDETLMTLVDIKSRGIKLAIDDFGTGYSMLSYLKHFPIDRIKVDRSFVRDIPENTDDAAI 635 Query: 723 VRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 I +A +I VIAEG+E+ + L C + QGY + +P+P Sbjct: 636 TEAIIAMAHSLKIEVIAEGIETREQLAFLKDRACEEGQGYYFGRPVP 682 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 89/243 (36%), Positives = 133/243 (54%), Gaps = 14/243 (5%) Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 ++R A+E +L L YQP +D+ T + G EAL RW ERG++SP FI +AE+ G I Sbjct: 506 DLRRAIEQNQLALYYQPQIDLKTGDMTGVEALVRWQHPERGLVSPAHFIPLAEETGLIVP 565 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 +G +++ A + + + K+ + +N+SP Q + +F + I++E GL+A L Sbjct: 566 IGEWVLREACKQKKIWLDTG--KNVGKVAVNLSPRQFRQKNFPGKVEAILQETGLEAKYL 623 Query: 653 CVEITETVI-----ERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKV 707 +EITE+ E IN+ + QL + G ++IDDFGTG S+L +K+ Sbjct: 624 ELEITESCAMEHAGETINQ-----LNQLNQMGTFLAIDDFGTGYSSLAYLQRFPIQKLKI 678 Query: 708 DSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQ 765 D F DI A I + I LA ++ V+AEGVE+E A L GC Q QG+LY Sbjct: 679 DRSFIHDIHDDANDAAIAKTIIGLAHNMQLRVVAEGVETESQAEWLRAKGCDQVQGFLYA 738 Query: 766 KPM 768 KPM Sbjct: 739 KPM 741 >UniRef50_B1WR61 Putative uncharacterized protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WR61_CYAA5 Length = 700 Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 83/245 (33%), Positives = 135/245 (55%), Gaps = 2/245 (0%) Query: 526 ENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAE 585 E + + ++R A+E E +L YQPI+ T ++G EAL RW +G ISP FI IAE Sbjct: 425 ERLEVESSLRKALEKQEFYLYYQPIISFKTSQLIGFEALLRWHHPTQGWISPATFIPIAE 484 Query: 586 DIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKEN 645 + G I LG +++ A + + + + +N+S +QLN+ F E+ +++E+ Sbjct: 485 ETGLIVSLGQWVLQEACHQISIWQSHFPFSEPLKVSVNISSFQLNQMDFVEQVKKVLEES 544 Query: 646 GLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSI 705 +KA+ L +EITETVI E ++ L+K GV+ISIDDFGTG S+L ++ D + Sbjct: 545 KIKASQLNLEITETVIMNNIESTSFKLQCLQKLGVKISIDDFGTGYSSLNYLQQLPIDIL 604 Query: 706 KVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYL 763 K+D F + +I+ I L + +AEG+E+ + + LG AQG++ Sbjct: 605 KIDRSFVRRLESNPSEFQIIEAIIKLGNILGMETLAEGIETSEQYNLIQSLGVDYAQGFI 664 Query: 764 YQKPM 768 + KP+ Sbjct: 665 FSKPL 669 >UniRef50_A1T0Y1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T0Y1_PSYIN Length = 727 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 122/449 (27%), Positives = 212/449 (47%), Gaps = 31/449 (6%) Query: 342 DAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNNQY-------- 393 ++ I+ + I+E K E +L L YD +G + N A+ S +Q Sbjct: 250 ESSGIVLVFQDISERKKTE----QQLTRLAQYDCLTG-LPNRALFTSLLSQAISRSDRRK 304 Query: 394 --LAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE 451 LA+ + L + V G D + +++++ QR+ + + D ++++ E Sbjct: 305 NKLALLFLDLDRFKQVNDSLGHDVGDLLLQQVAQRLQLATLEGGTVSRLGGDEFMVILEE 364 Query: 452 NVQTFTRKIA-----MVNDFDSSFGY--RNLRIHKS---AICEPLQGENAWSYAEKLKLA 501 V + + K A M+ D+ F R + I S A+C + S ++ +A Sbjct: 365 -VNSESHKAAKLAQKMITSLDAPFNILGREVLISTSIGIALCSG-STQCIDSLLKRADMA 422 Query: 502 ISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGA 561 + ++ + F F + ++I + +RHA++ E FL YQP VD N+ I+G Sbjct: 423 MYRAKEQGRNNFQFYTAELQQQASKSIELENRLRHALQRKEFFLHYQPQVDTNSGQIIGL 482 Query: 562 EALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLH 621 EAL RW + +ISP +FI +AE+ G I +G +++ A + + + L + Sbjct: 483 EALLRWQPDGQALISPEEFIPVAEEAGLIVPIGEWVLREACSQLHRWHRSGLLSPTVKMA 542 Query: 622 INVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNI-EQLRKQGV 680 +N+S QL T I++E GLK + L +EITET + + + +NI + G+ Sbjct: 543 VNLSVRQLEHTSLLSTLTQILQETGLKPSQLELEITETAVMK-DPDLVVNILHSIHAMGI 601 Query: 681 RISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVI 738 ++S+DDFGTG S+L+ + +K+D F DI G I+ I L+R + V+ Sbjct: 602 QLSLDDFGTGYSSLRYLKLLPLHVLKIDRSFINDIGGKQRDQAILESIIYLSRNLDLTVV 661 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKP 767 AEGVE+++ L + C QGY KP Sbjct: 662 AEGVETQEQLDFLSRFNCHSIQGYYISKP 690 >UniRef50_Q1K1L5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1L5_DESAC Length = 1018 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 124/461 (26%), Positives = 217/461 (47%), Gaps = 31/461 (6%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNNQ 392 I+ ++ +G K SI + I+++K+AE +L L +D +G ++ + Sbjct: 546 IDTIRDHDGSIKNFFSISSDISQIKEAE----RQLHQLAYFDTLTGLPNRVSFAQKLEEH 601 Query: 393 Y--------LAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA-- 442 LAV ++ L + + G + KL Q +E+ C +F A Sbjct: 602 LTTCDEACNLAVMVLDLNAFKLINESLG----PVLADKLLQMFSERLTLCSYDDSFVARI 657 Query: 443 ---DLYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKSA--ICEPLQGENAWSYAEK 497 + +L ++ V++ ++ + G + + + S P GE + Sbjct: 658 GGDEFAFILRKQRVRSLLDELFECVEAPFVIGAQRVSLTTSVGIAVAPDDGETVSELLKN 717 Query: 498 LKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 +A+ SI+D + F + + + + E + +A +R A++ GE L YQP +++ Sbjct: 718 ANIALYSIKDIRRNSFSYYEQVMSDRVIERMSLAEMLREAVDNGEFELYYQPKINLKDGM 777 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 ++GAEAL RW S + G++ P +FI IAE G I +G ++ A + + Q + Sbjct: 778 VVGAEALLRWHSRD-GMVPPDRFIPIAEQTGLILPIGEWVLLQACEQAHIWRQEYP---E 833 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITE-TVIERINEHFYLNIEQLR 676 F + +N+SP Q + + I+KE L A +L +EITE +IE I+ + + LR Sbjct: 834 FHMGVNLSPAQFDLDYLPRLVADILKEAQLPAEALELEITEGMIIEDIDNTVQI-LRSLR 892 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNR 734 GV ISIDDFGTG S+L + D +K+D F ++ + + +V I LAR Sbjct: 893 DLGVEISIDDFGTGYSSLSYLTRLPLDILKIDRSFMFEVPDSRDSTNVVLSILALARSLN 952 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 + V AEGVE+ED L C QGY +P+P + +++ Sbjct: 953 LKVTAEGVETEDHVTLLHDHRCTYIQGYFCSRPLPVAEFEE 993 >UniRef50_B9ZPK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZPK3_9GAMM Length = 842 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 109/395 (27%), Positives = 181/395 (45%), Gaps = 21/395 (5%) Query: 388 SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLL 447 S + +AV ++ L + + FG E ++++R++ QR+ + I F D +++ Sbjct: 440 SRHEHRIAVMLLDLDHFKMINDTFGHHEGDELLREVAQRLKDAAGTDATIGRFGGDEFMI 499 Query: 448 LCRE---NVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICE-----PLQGENAWSYAEKLK 499 L E +Q R ++ FD F R S+ P +A + Sbjct: 500 LLPEITDELQVGERGQEILAQFDRPFHTGPTRQFSSSASLGIALFPQDARDANTLVRYAD 559 Query: 500 LAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAIL 559 +A+ + + + F + ++ + ++HA+E +L L +QP++D ++ A+ Sbjct: 560 MAMYEAKRSGRNTYAFYSEHLDAQVRAEQQLQERLKHALEHDQLALHFQPLIDAHSGAVT 619 Query: 560 GAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFL 619 AEAL RW E G + P +FI AE G I LG +I+ A + ++Q L D Sbjct: 620 AAEALLRWNDPELGAVPPSRFIPSAEANGLILPLGDWVIRRACQQLADWAQ---LDVDTS 676 Query: 620 LHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETV----IERINEHFYLNIEQL 675 + INVS Q +P R +KE G L +E+TETV + EH + L Sbjct: 677 ICINVSALQFRQPDLVSRLAAALKEAGASPEHLEIEVTETVAMADVALTREH----LSGL 732 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYN 733 + GVR+S+DDFGTG S+L + D IK+D F I A I+R + L Sbjct: 733 KALGVRVSLDDFGTGYSSLAYLKSLPIDKIKIDRSFIAGIGHDRDAEMILRSVMGLGHSL 792 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 + ++AEGVE+ + L + GC QG+ Y + Sbjct: 793 HLKLVAEGVETAEQLAFLRREGCDLYQGWFYSPAL 827 >UniRef50_Q55434 Phytochrome-like protein cph2 n=1 Tax=Synechocystis sp. PCC 6803 RepID=PHY2_SYNY3 Length = 1276 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 85/290 (29%), Positives = 151/290 (52%), Gaps = 4/290 (1%) Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELF 544 P GE A S + ++A++ + + + F + + + + ++R A+ E Sbjct: 565 PYDGETAESLLKFAEIALTRAKCQGKNTYQFYRPQDSAPMLDRLTLESDLRQALTNQEFV 624 Query: 545 LVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGE 604 L +QP V ++T +LG EAL RW G ++P FI +AE++G IN LG +++TA Sbjct: 625 LYFQPQVALDTGKLLGVEALVRWQHPRLGQVAPDVFIPLAEELGLINHLGQWVLETACAT 684 Query: 605 FRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERI 664 +HF + + + +N+S Q + + +K G+ L +EITE+++ Sbjct: 685 HQHFFRETGRR--LRMAVNISARQFQDEKWLNSVLECLKRTGMPPEDLELEITESLMMED 742 Query: 665 NEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKI 722 + + + +LR++GV+++IDDFGTG S+L ++ +K+D F D+ G I Sbjct: 743 IKGTVVLLHRLREEGVQVAIDDFGTGYSSLSILKQLPIHRLKIDKSFVNDLLNEGADTAI 802 Query: 723 VRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 ++ + DLA + +AEG+ESE + L K+GC QGY +P+P A Sbjct: 803 IQYVIDLANGLNLETVAEGIESEAQLQRLQKMGCHLGQGYFLTRPLPAEA 852 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 116/448 (25%), Positives = 224/448 (50%), Gaps = 24/448 (5%) Query: 349 IKNSIAEMKD-AEIERSNKLL-SLISYDQESGFIK--------NMAIIESN-NNQYLAVG 397 I ++ +KD EI++ +++L ++ YD +G MA+ +S NN+ A+ Sbjct: 402 IIGTVVALKDITEIKKKDEILYNMEYYDPLTGLPNRSLFSDRLKMALAQSKRNNEMCALI 461 Query: 398 IIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE--NVQT 455 I+ L +A+ G + +++++ ++I + + D ++++ + ++ Sbjct: 462 ILDLDNFKAINDTLGHSVGDMLLKQVAEKIKGYLREVDTVARIGGDEFIIIQPQIKDIND 521 Query: 456 FTRKI-AMVNDFDSSFGYRNLRIHKSAICE----PLQGENAWSYAEKLKLAISSIRDHMF 510 TR ++ F + + +A P GE+ + + A+ ++ Sbjct: 522 ATRAADRILKKFQQPWILEGKEYYITASMGIGIYPNGGEDPQTIFKNADTALYRAKELGR 581 Query: 511 SEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSA 570 + + ++ ++ + + I ++R A+E E L YQP +DI T I+G EAL RW Sbjct: 582 NNYQLYTESMNQKVLQRLDIENSLRRAIEKEEFVLFYQPQIDIKTGKIVGFEALLRWYHP 641 Query: 571 ERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLN 630 + G++ P++FI +AED G I +G +++TA + + + + + L+ +N+S Q Sbjct: 642 DYGLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIECGL--EPHLISVNLSARQFQ 699 Query: 631 EPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNI-EQLRKQGVRISIDDFGT 689 + E I GL L +EITE+ + + F +++ QLRK+G+R+S+DDFGT Sbjct: 700 RSNIVEVIDRIRSSTGLAPELLELEITESTAMQ-DLSFTIDVLNQLRKKGIRVSLDDFGT 758 Query: 690 GLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIPVIAEGVESEDV 747 G S+L ++ D++K+D F DI + + I + + LA + V+AEGVE+++ Sbjct: 759 GYSSLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLAHKLDLTVVAEGVETKEQ 818 Query: 748 ARELIKLGCVQAQGYLYQKPMPFSAWDK 775 L K C +AQGYL+ KP+P +K Sbjct: 819 LLFLKKEKCDKAQGYLFSKPLPAEEIEK 846 >UniRef50_C4XGB8 Putative response regulator receiver protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XGB8_DESMR Length = 801 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 84/237 (35%), Positives = 128/237 (54%), Gaps = 1/237 (0%) Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 ++R A++ GE +L YQPI+ + R + G EAL RW +GI P +FI + ED G I Sbjct: 553 DLRAALKRGEFYLDYQPILALRDRRVTGFEALVRWRRPGKGIAPPGEFIPVCEDTGLIVP 612 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 LG ++ A + R + +N+S QL++P E I+++ G+ +L Sbjct: 613 LGLWVLTEACRTMASWQARFPETAGMSMSVNLSAKQLSQPSLVEDVERILRDTGMDPRAL 672 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +EITETVI E L +++L+ GVR+S+DDFGTG S+L D++KVD F Sbjct: 673 KLEITETVIMDNPEVSILRLKRLKALGVRLSVDDFGTGYSSLSYLQRFPIDTLKVDRAFV 732 Query: 713 GDIFGTAG-KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 D+ + KIV + LA + V+AEGVE E + L C QG+L+ +P+ Sbjct: 733 SDLDTSENRKIVGAVVALAHSLGLDVVAEGVELETQSDVLTGFACEAGQGFLFSRPV 789 >UniRef50_Q7MI32 C-di-GMP phosphodiesterase A-related protein n=40 Tax=Vibrio RepID=Q7MI32_VIBVY Length = 687 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 88/262 (33%), Positives = 148/262 (56%), Gaps = 4/262 (1%) Query: 511 SEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSA 570 ++++F + ++E + I + + A+ G+L L YQP V+ + I+G EAL RW Sbjct: 397 NKYMFYEPEMQAQVESFLEIEKGLHEALHKGQLELYYQPQVNAQQQ-IIGVEALIRWNHP 455 Query: 571 ERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDF-LLHINVSPWQL 629 E+G++ P F+ IAE+ G I ++G II+ A ++ + + L + F L IN+SP Q Sbjct: 456 EKGVLPPGVFMPIAEETGQILQIGDWIIEQACFQYAQWKKEQVLPETFHRLAINISPLQF 515 Query: 630 NEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGT 689 ++ F E T +K+ + + +EITE+++ E + +L++ ++ISIDDFGT Sbjct: 516 SKNAFVEHITHALKQANITGEHIELEITESLLLENVESAINKMAELKELDLKISIDDFGT 575 Query: 690 GLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDV 747 G S+L+ + D +K+D F + + IV I +A + VIAEGVE+E+ Sbjct: 576 GYSSLRYLKHLAVDVLKIDRSFVTQLHLDQSDQAIVSTIIMIAERLSLEVIAEGVETEEE 635 Query: 748 ARELIKLGCVQAQGYLYQKPMP 769 L++LGC Q QGYL+ KP+P Sbjct: 636 FNTLVELGCEQFQGYLFGKPLP 657 >UniRef50_B1XNC7 Sensory box/GGDEF family protein n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XNC7_SYNP2 Length = 610 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 82/244 (33%), Positives = 139/244 (56%), Gaps = 4/244 (1%) Query: 527 NIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAED 586 + + ++R A+E EL +VYQP +++ T ++GAEAL RW RG++ P +FI++AE+ Sbjct: 339 TVSLEADLRQALERNELEVVYQPKMNLQTGKVVGAEALLRWFHPTRGLVLPNQFISLAEE 398 Query: 587 IGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENG 646 G I +G +++ A + R + Q A LKD F + IN+S Q + + H R + IM N Sbjct: 399 TGLIIPIGEYVMEEACCQLRRW-QLAGLKD-FYMSINLSAKQFTQLNLHHRLSQIMINNQ 456 Query: 647 LKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIK 706 L+ + +E+TE+ + E ++ LR G++I++DDFGTG S+L + + D++K Sbjct: 457 LQPQDIQLELTESTLVNNGEVSIRRLKALRSLGLKIALDDFGTGYSSLSYLQQFSFDTLK 516 Query: 707 VDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLY 764 +D F I I+ I ++A + V+AEGVE E L + C + QG+L+ Sbjct: 517 LDRSFIHGIHRNHVNATIITAIIEMAHNLNLKVVAEGVEDEGELEFLTRFNCDEIQGFLF 576 Query: 765 QKPM 768 +P+ Sbjct: 577 SRPI 580 >UniRef50_C6P3U3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3U3_9PROT Length = 600 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 125/453 (27%), Positives = 207/453 (45%), Gaps = 53/453 (11%) Query: 352 SIAEMKDAEIER----------SNKLLSLISYDQESGFIKNMAIIESN-NNQYLAVGIIK 400 S E KD++I+R N+LL L DQE + +N ++Q +AV + Sbjct: 151 SAMEHKDSQIKRIAHYDSLTALPNRLLFLDRLDQE--------VARANRDDQMVAVLSLD 202 Query: 401 LCGLEAVEAVFGVDERNKIVRKLCQRIAEKYA---QCCDIVTFNADLYLLLCRENVQTFT 457 L + V FG + + +L Q +A+K + + CD V AD + V+ Sbjct: 203 LDRFKKVNESFG----HPVGDQLLQTVAKKLSSQIRACDTVARIADDEFAIVLTGVKATH 258 Query: 458 RKIAMVNDFDSSFGYRNLRIHKSAI---------CEPLQGENAWSYAEKLKLAISSIRDH 508 + SF + + I S + P+ G N + + A+ + Sbjct: 259 AAGEVAQKILDSFAHSPISISDSEVFITLSIGISIYPVDGVNTTALLKSADTALHQAKRE 318 Query: 509 MFSEFIFCDDAKLNEIE-ENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRW 567 + F + ++N + + + +R A+ E L YQP VD++ I+G EAL RW Sbjct: 319 GRNNFQYYT-VQMNATSWQRLKLETELRQALARNEFELHYQPKVDMDCNKIVGMEALLRW 377 Query: 568 VSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPW 627 SAERG+++P +FI + E+ G I +G +++ A + R + Q A + D + +N+S Sbjct: 378 QSAERGLVTPAEFIPLLEETGLILPVGEWVLREACKQARAW-QDAGIP-DVHIAVNLSSL 435 Query: 628 QLNEPHFHERFTTIMKE-------NGLKANSLCVEITETVIERINEHFYLNIEQLRKQGV 680 Q +P F IM+E NG++ + + V I+ + L + G+ Sbjct: 436 QFRQPDFAGSVLKIMQEHGLDPAMNGIELELTESLLLDNVARTID-----TLNTLHEAGI 490 Query: 681 RISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVI 738 R SIDDFGTG S+L S+K+D F D+ IV I L R + VI Sbjct: 491 RFSIDDFGTGYSSLSYLKRFPISSLKIDQSFVQDLSSNRDDESIVSAIIALGRSLGLSVI 550 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPMPFS 771 AEGVE+ + + +L ++GC QGYL+ +P+P + Sbjct: 551 AEGVETAEQSAQLRRMGCDGMQGYLFSRPVPVA 583 >UniRef50_A6WAT4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Actinomycetales RepID=A6WAT4_KINRD Length = 683 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 89/243 (36%), Positives = 134/243 (55%), Gaps = 8/243 (3%) Query: 533 NIRHAMEIGELFLVYQPIVDINTRAIL----GAEALCRWVSAERGIISPLKFITIAEDIG 588 ++ HA++ G+L + YQ VD L G EAL RW ERG + PL+FI +AE G Sbjct: 370 DLTHALDAGQLEVHYQATVDFRKDNGLAQPKGYEALLRWHHPERGTVPPLEFIPLAEASG 429 Query: 589 FINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLK 648 I +G +++TA + +S A + +N+S QL ++E+GL+ Sbjct: 430 DILAIGAWVLRTATAQAATWS--AERGYPVSVAVNLSAVQLASDDILHTVREALRESGLR 487 Query: 649 ANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVD 708 + L +E+TE+V+ E + QLR GV ++IDDFGTG S+L + D++K+D Sbjct: 488 PHQLTLEVTESVLVDDLEAVSARLAQLRATGVLVAIDDFGTGYSSLSYLRRLPVDTVKID 547 Query: 709 SQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQK 766 F D+ G+A +V I +LAR + V+AEGVE+E A+ L +L C AQGYLY + Sbjct: 548 QSFITDLAHGGSATTLVASIIELARSLGLDVVAEGVETEQQAQVLRELSCTYAQGYLYAR 607 Query: 767 PMP 769 P P Sbjct: 608 PQP 610 >UniRef50_A1KBA9 Conserved hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KBA9_AZOSB Length = 726 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 112/436 (25%), Positives = 201/436 (46%), Gaps = 23/436 (5%) Query: 359 AEIERSNKLLSLISYDQESGFIKN---------MAIIESNNNQ-YLAVGIIKLCGLEAVE 408 +E +R+ +++S +Y + + N +AI ++ LAV I + + V Sbjct: 282 SERKRAEEIISFQAYHDQLTRLPNRVLFKDRLELAIAQAQRRTGALAVMFIDVDRFKLVN 341 Query: 409 AVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR-----ENVQTFTRKI--A 461 FG E + ++R + R+A + + D + +L ++ + RKI + Sbjct: 342 DTFGHAEGDMLLRGIAARLAGTLRRGDTLARLGGDEFTVLLPDINGPQDAEVIARKILDS 401 Query: 462 MVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKL 521 + F S G P G+ A +A+ ++ + F F D A Sbjct: 402 LSAPFPLSHGDFRATASIGIALFPRDGDGAEDLTRHADIAMYQVKRSGKNGFRFFDIALN 461 Query: 522 NEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFI 581 + E I + ++R A+E E L YQP + + ++G EAL RW G++SP FI Sbjct: 462 SHYRERIVLENDLRTALERREFELHYQPQISLTQHRVVGMEALLRWNHPNLGLVSPATFI 521 Query: 582 TIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTI 641 +AE++G I ++ +++ A G+ + R + +D + +N+SP + T Sbjct: 522 PVAEEMGLIGDISRWVLEEACGQLARW--REAGHNDLRMSLNLSPHDFDSQDVVTMVTEC 579 Query: 642 MKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEIN 701 ++ + L + L +EITE+++ + + LR+ G+ ++IDDFGTG S L + Sbjct: 580 VERHRLPPSQLELEITESMMMQDAAGVAAKVRGLREAGLSVAIDDFGTGYSALAYLQKFP 639 Query: 702 PDSIKVDSQFTGDIFGT-AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQ 760 ++K+D F ++ G I+ I +AR + +IAEGVE + A L LGC Q Sbjct: 640 VSTLKIDRSFVRELEGPNTNPIISAITGIARGFGLQLIAEGVERSEQAETLRTLGCDVMQ 699 Query: 761 GYLYQKPMP---FSAW 773 G+LY +P P +AW Sbjct: 700 GFLYARPAPAAEATAW 715 >UniRef50_C6MET2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MET2_9PROT Length = 753 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 85/241 (35%), Positives = 136/241 (56%), Gaps = 6/241 (2%) Query: 530 IARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGF 589 IA +RHA+ +LFL+YQPIV + T +I AEAL RW ERG +SP++FI+IAE+ Sbjct: 501 IAYELRHALREQQLFLMYQPIVKLATGSIHKAEALVRWQHPERGTVSPVEFISIAEESNL 560 Query: 590 INELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKA 649 I+E+G + K A+ + + +A+ +F + IN SP Q + + E L Sbjct: 561 ISEIGDWVFKQAVNQVAAW--QANYNTNFQISINKSPKQFISK--MSDWVNHLHEQKLDG 616 Query: 650 NSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDS 709 +S+ VEITE ++ ++E + R GV+++IDDFGTG S+L + + D +K+D Sbjct: 617 HSIIVEITENLLLDVHELVVKQLLNFRDAGVQVAIDDFGTGYSSLSYLKKFDIDYLKIDQ 676 Query: 710 QFTGDIFGTAGK--IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKP 767 F ++ + + + +A + VIAEGVE++ + LI +GC QGY + KP Sbjct: 677 SFISNLDSRSNDRILCEAVITMAHRLGMKVIAEGVETDSQKQLLIAMGCDYGQGYFFSKP 736 Query: 768 M 768 + Sbjct: 737 L 737 >UniRef50_B6R9S7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R9S7_9RHOB Length = 728 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 114/452 (25%), Positives = 210/452 (46%), Gaps = 32/452 (7%) Query: 340 EGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NN 390 EG+ +++ +I++ K AE LL + +D +G + E N+ Sbjct: 256 EGNTTHVVTTATNISDRKRAEAH----LLHIAHHDALTGLPNRTMLGERIDEEIFQCRNS 311 Query: 391 NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCD----IVTFNADLYL 446 + A+ I L +++ G ++ +L + +AE+ +C D + D + Sbjct: 312 GRSFALHFIDLDRFKSINDALG----HRTGDRLLEVLAERLLRCVDGSDLVARLGGDEFA 367 Query: 447 LL-----CRENVQTFTRKIAMVNDFDSSFGYRNLRIHKS-AICE-PLQGENAWSYAEKLK 499 +L E F + + V + + L+ S I + P G N+ Sbjct: 368 ILQTDLKSSEEAMRFAQHLVSVVEEPFHISGKELQTSASVGITKYPEDGLNSEELLRCAD 427 Query: 500 LAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAIL 559 +A+ + + F + ++E + + +R+A+E +L L YQP +D+ T I+ Sbjct: 428 MAMYQSKADGGNTFHLFSTKMDHHVKETVALEAELRNAIEHDQLELFYQPQIDLRTNEIV 487 Query: 560 GAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFL 619 GAEAL RW + G+++P F+ AE++G I +G +I A + + + + Sbjct: 488 GAEALLRWNRPDYGVVAPNVFLGTAEEVGLILPIGEWVIFAACQQAKKWMDMG--LETPR 545 Query: 620 LHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQG 679 + +N+SP Q + + + + L A+ L +EITE ++ ++ ++ ++R+ G Sbjct: 546 IAVNISPTQFRKQNVPQLLKDALVSCSLPADKLEIEITENIVLHGSDATVRDLREIREMG 605 Query: 680 VRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIPV 737 + ISIDDFGTG S+L + D +K+D FT D+ I++ I L + + + Sbjct: 606 IAISIDDFGTGYSSLAYLSRYSVDCLKIDRCFTRDMMTDPNNTVIIKAIVGLGKSLDLSI 665 Query: 738 IAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 IAEGVE+ + A L GC AQGYL+ KP+P Sbjct: 666 IAEGVETREQAEYLKDAGCEMAQGYLFGKPVP 697 >UniRef50_C4XMU6 GGDEF domain protein n=2 Tax=Desulfovibrio RepID=C4XMU6_DESMR Length = 601 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 104/394 (26%), Positives = 183/394 (46%), Gaps = 11/394 (2%) Query: 386 IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLY 445 + N + AV + + + V FG ++++ + R+ ++ + + F D + Sbjct: 188 LRRNPDALYAVLYLDMDRFKLVNKTFGHVTGDRLLMVIANRLQKQLRELDTLARFGGDEF 247 Query: 446 LLLCRENVQTFTRKIAMVND----FDSSFGYRNLRIHKSAICEPLQGENAWSYAEKL--- 498 +L E++ M + F + I + + G A+ + +++ Sbjct: 248 AILI-EDISGLDEASTMAENVLRQLAQPFRLKKQEIFVTCSLGVVVGSAAYEHPDQVLRD 306 Query: 499 -KLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 A+ S ++H + D + + + +R AME GE+ + YQPIV + T Sbjct: 307 ADNAMYSSKEHGGDHYTVFDAGMRVLTQRRMEMELALRQAMESGEITVHYQPIVSLATGD 366 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 + G EAL RW +G I P +FI IAE+ G INELG I++ + + + Sbjct: 367 VTGLEALARWQHPRQGFIPPSEFIPIAEESGLINELGALILRQSCRRLVELGRENPEGEK 426 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK 677 + +N+S Q P F + I+ E G+ A+ + +E+TE+V+ + I+ L+ Sbjct: 427 LSVSVNISGRQFKRPDFVQEVAGILAETGIDASRVKLELTESVLMDDADEAVRAIKNLKA 486 Query: 678 QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRI 735 GV++ IDDFGTG S+L DS+KVD F G++ +IVR I +A + Sbjct: 487 LGVKVVIDDFGTGYSSLSYIQRFPFDSLKVDRSFVGNMNEAEQNMEIVRAIIAMAHKLGL 546 Query: 736 PVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 V+AEGVE + L +L C AQG+ + + +P Sbjct: 547 EVVAEGVELAEHKAALSELRCESAQGFFFSRAVP 580 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 114/437 (26%), Positives = 207/437 (47%), Gaps = 25/437 (5%) Query: 354 AEMKDAEIERSNKLLSLISYDQESGFIKN---------MAIIESNNNQ-YLAVGIIKLCG 403 A+ + AE +R ++L ++Y + N MA+ +++ N+ LAV + L Sbjct: 498 AQQELAERKRIEEILRYLAYHDSLTELPNRTLFNDRLSMALNQAHRNKNKLAVMFLDLDH 557 Query: 404 LEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR-----ENVQTFTR 458 + V G D +++++ + QR ++ + I D + +L EN Sbjct: 558 FKKVNDTLGHDIGDQLLKGIAQRFSKLLRKGDTIARIGGDEFTILLHNITRAENASIVAD 617 Query: 459 KIAMVNDFDSSFGYRNLRIHKSA----ICEPLQGENAWSYAEKLKLAISSIRDHMFSEFI 514 KI ++ + + N H + P G +A S + A+ ++ + + Sbjct: 618 KI--IDTLANPWIIGNHEFHITTSIGIALYPDDGTDAESLLKNADAAMYQAKEMGRNNYQ 675 Query: 515 FCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGI 574 F + + N+R A++ E + YQP V+I+T I+G EAL RW +RG+ Sbjct: 676 FYTPTMNAQTLRRFELENNLRRALDRKEFVIYYQPQVEIHTGKIVGVEALIRWQHPQRGM 735 Query: 575 ISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHF 634 ISP +FI +AE+ G I +G I++ A + + + R + +N+S Q +PH Sbjct: 736 ISPAEFIPMAEETGLIIPIGEWILRRACAQNKAWQDRGF--SPMRVTVNLSARQFLQPHL 793 Query: 635 HERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNL 694 + + ++++ GL L +EITE++ + + +LRK G+ ++IDDFGTG S+L Sbjct: 794 PQYISNVLEDTGLGPQWLELEITESLAMKDVAFTEKTLIELRKMGITLAIDDFGTGYSSL 853 Query: 695 KRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELI 752 + D +K+D F D+ + I+ I L ++ V+AEGVE+++ L Sbjct: 854 NYLKRLPIDILKIDRSFIHDLNTESDDVAIISAIITLGHNLKMKVVAEGVETKEQLMFLR 913 Query: 753 KLGCVQAQGYLYQKPMP 769 + C QGYL+ KP+P Sbjct: 914 QQQCDLMQGYLFTKPLP 930 >UniRef50_Q0C635 Putative diguanylate cyclase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C635_HYPNA Length = 594 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 126/447 (28%), Positives = 195/447 (43%), Gaps = 41/447 (9%) Query: 360 EIERSNKLLSLISY-DQESGFIKNMA----IIES-------NNNQYLAVGIIKLCGLEAV 407 ++ R N L I+Y D +G +A IIE+ ++ + I + L V Sbjct: 129 KLRRENDHLRKIAYRDSRTGLPNALAAEKRIIETLPGASFERPAAFILLDIDRFAHL--V 186 Query: 408 EAVFGVDERNKIVRKLCQRIAEKYAQCCD----------IVTFNADLYLLL-----CREN 452 E V G + ++ QRI++ + D + AD + L RE+ Sbjct: 187 EQV-GAGHGDMMIHAAAQRISKALSDVPDPSASALRGSMLAALTADQFTLFMPNAGSREH 245 Query: 453 VQTFTRKIAMVNDFDSSFGYRN----LRIHKSAICEPLQGENAWSYAEKLKLAISSIRDH 508 V R A+ N F+ F + + + P ++ + KLA+ +R+ Sbjct: 246 VIAIAR--AIRNAFNDPFTILGRPVTMSLSGGIVMAPEDADSPQKLMQNAKLALRLVRNE 303 Query: 509 MFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWV 568 S F F ++ +R A+E E V+QP +D T I+GAEAL RW Sbjct: 304 SQSGFRFFTPRLTRIVQGRYRFEAELRDAVENREFKAVFQPKIDFATGRIVGAEALARWR 363 Query: 569 SAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQ 628 + +ISP FI +AE+ G I E+G QI++ A R + D + +NVSP Q Sbjct: 364 RSNGKLISPAAFIPVAEEAGLIEEIGKQILEAACEAARTWELEG---HDVTVAVNVSPSQ 420 Query: 629 LNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFG 688 E ++ +GL L +EITE++ I LR G +++IDDFG Sbjct: 421 FQRNDLTETVMGALRRSGLHPRLLELEITESMAVSDPARVAEFISPLRAMGTKLAIDDFG 480 Query: 689 TGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNRIPVIAEGVESED 746 TG SNL ++ D K+D QF + A IV +I +A + +AEGVE+ Sbjct: 481 TGHSNLATLTQLPFDVFKIDRQFVSALETDRQAPAIVEMILAMAETLGLKTVAEGVETTK 540 Query: 747 VARELIKLGCVQAQGYLYQKPMPFSAW 773 A L + GC AQG+LY +P A+ Sbjct: 541 QADFLRRRGCTMAQGFLYSPGLPDQAF 567 >UniRef50_A6SW06 Sensory box protein n=2 Tax=Betaproteobacteria RepID=A6SW06_JANMA Length = 459 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 83/247 (33%), Positives = 141/247 (57%), Gaps = 5/247 (2%) Query: 525 EENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIA 584 E N+ + ++R A++ +L L YQP + R I+GAEAL RW +G++SP FI +A Sbjct: 184 ERNV-MEADLRKALQDNQLMLYYQPQTGNDGR-IVGAEALLRWRHPVKGMVSPADFIPLA 241 Query: 585 EDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKE 644 E G I +G+ ++ A + +S+ + L INVS Q +P F + +++ Sbjct: 242 EQTGLILPIGHWVLGMACAQLISWSKHPA-TAQLSLAINVSALQFKQPDFVSQVVSVLDR 300 Query: 645 NGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDS 704 +G + L +E+TE+++ + L+++G+R+S+DDFGTG S+L ++ D Sbjct: 301 SGADPHLLELELTESMLVNDVNDIIAKMNALKEKGLRLSLDDFGTGYSSLSYLKKLPLDQ 360 Query: 705 IKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGY 762 +K+D F D+ + IVR + +LAR + VIAEGVE+++ + L +LGC+ QGY Sbjct: 361 LKIDQSFVRDMLFDSNDVTIVRTVVELARGMGLHVIAEGVETQEQRQFLAELGCLSFQGY 420 Query: 763 LYQKPMP 769 L +P+P Sbjct: 421 LLSRPVP 427 >UniRef50_B8DJE3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DJE3_DESVM Length = 1076 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 84/251 (33%), Positives = 141/251 (56%), Gaps = 5/251 (1%) Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 +R AME GE+ L +QP+V + T I G EAL RW + G++SP +FI +AE+ G I Sbjct: 819 ELRRAMERGEIELYFQPVVSLRTARITGLEALVRWNHPDLGLLSPSEFIPLAEESGLIYH 878 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 L +++ R +RA +F L++N+S + E +++++ E+G + Sbjct: 879 LDRHVLELGCASVRALRERAGPAAEFALNLNISARSFRRWNMVESYSSVILESGCNPLDV 938 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +EITE+++ + + + ++ GV + +DDFGTG S+L + D IK+D FT Sbjct: 939 RLEITESLLLTGVDAVTDKLWKFKELGVSLVLDDFGTGYSSLNYLRQFPMDMIKIDKSFT 998 Query: 713 GDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPF 770 + A IV+ I L R + V+AEG+E + A L++LGC+ QG+LY +P+PF Sbjct: 999 SRVHEEKAAYGIVQSIVSLGRGLGLGVVAEGIERPEQAEVLLELGCLYGQGFLYSRPLPF 1058 Query: 771 SAWDKSGKLVK 781 D++ KL++ Sbjct: 1059 ---DRTAKLLE 1066 >UniRef50_C5T9Y9 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Comamonadaceae RepID=C5T9Y9_ACIDE Length = 777 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 106/392 (27%), Positives = 189/392 (48%), Gaps = 23/392 (5%) Query: 394 LAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVT-FNADLYLLLCREN 452 +AV + L + V V G +++++ + R+ E+ + D+V + + +L + Sbjct: 385 MAVLTLDLDRFKHVNDVLGYPFGDRLLQAVAGRLREQVVRPEDMVARLGGNEFAVLLQGA 444 Query: 453 VQTFTRKIA--MVNDFDSSFGYRNLRIHKSAI----CEPLQGENAWSYAEKLKLAISSIR 506 ++A + + F+ + + + SA C P E+A + + ++A+ + + Sbjct: 445 DAAAALEVARRINHSFEDPLVFEDQNVDLSAAMGIACWPGDAEDADTLLSRSEIAMYAGK 504 Query: 507 DHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCR 566 + + D A + + + + +RHA+E EL L QP + ++ + L AEAL R Sbjct: 505 RQLSGPLRY-DPALDSASAQTLSLLTELRHAVEHHELRLYLQPKIALHGQPGLAAEALVR 563 Query: 567 WVSAERGIISPLKFITIAEDIGFINELGYQIIKT-----AMGEFRHFSQRASLKDDFLLH 621 W +RG++ P++FI AE GF+ +L + + A RH R S Sbjct: 564 WQHPQRGLVPPMEFIPFAEQTGFVRQLTLWMFEEVCRWLATPAARHLPLRVS-------- 615 Query: 622 INVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVR 681 +N+S L +P R ++ G+ A++LC+EITE+ I + + +L + G + Sbjct: 616 VNLSTRDLLDPELCHRLAALLARYGVAASALCLEITESAIMDDPQRAEAMLNRLSEHGFK 675 Query: 682 ISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIA 739 +SIDDFGTG S+L + D +K+D F + G IVR DLA + V+A Sbjct: 676 LSIDDFGTGYSSLAYLKRLPVDELKIDKSFVMGMESAGDDALIVRSTIDLAHNLGLTVVA 735 Query: 740 EGVESEDVARELIKLGCVQAQGYLYQKPMPFS 771 EGVE++ + L L C +AQGY KP+P + Sbjct: 736 EGVETQAILGHLRSLSCDEAQGYAISKPLPAA 767 >UniRef50_A3JFU9 Predicted signal transduction protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JFU9_9ALTE Length = 730 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 108/432 (25%), Positives = 205/432 (47%), Gaps = 19/432 (4%) Query: 359 AEIERSNKLLSLISYDQESGFIKNMAIIES-----NNNQYLAVGIIKLCGLEAVEAVFGV 413 AE +R +L+ L +D+ +G + S Q V +I + V FG Sbjct: 302 AEAKRLKELMYLSRHDELTGVGNRSGLSASIKSLLRRKQSFMVAVINIDHFRGVNDRFGQ 361 Query: 414 DERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR----ENVQTFTRKIAMVNDFDSS 469 + ++++ +R+ + AD ++LL + + +++ R+++ D Sbjct: 362 EYGDQVLCAFARRLLSVVDDKDVVARLGADEFVLLIKVVNLQALESHARQLSHQLDKPLE 421 Query: 470 FGYRNLRIHKS--AICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEEN 527 L++ S P G++ + LA+ + ++ ++ + I Sbjct: 422 LEQFPLQLGASIGVAVSPRDGDSVNTLLRSAHLALYQAKKSRNDWCLYREELEQAYIR-R 480 Query: 528 IWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDI 587 + + + +R A+ +G+L +V+QP VD + + + G EAL RW E G + P +F+ +AE Sbjct: 481 VQLEQRLRQALSLGQLTMVFQPQVD-HVKVVYGYEALVRWYDEELGQVGPDEFVGVAESS 539 Query: 588 GFINELGYQIIKTAMGEFRHF-SQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENG 646 G + LG +++T++ EF F + ++ L +N+S Q +P F + +++ G Sbjct: 540 GLMPALGQFVMETSVREFSEFVGAQGEMRK---LAVNISVLQFLQPGFAKDVLSLLSRYG 596 Query: 647 LKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIK 706 L L +E+TE++ + + +LRKQGVR+S+DDFGTG S+L + D +K Sbjct: 597 LSPKQLVLEMTESLFISNFDDVLAVLNELRKQGVRVSMDDFGTGYSSLSLLRTLPLDELK 656 Query: 707 VDSQFTGDIFG--TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLY 764 +D F + +V I +AR +++ ++AEGVE+E L+ +GC QGY + Sbjct: 657 IDKTFIDGLLDDHKVQNMVASIISIARSHQLELVAEGVETEGQYLALMAMGCKLFQGYYF 716 Query: 765 QKPMPFSAWDKS 776 +P S KS Sbjct: 717 GRPAALSVGPKS 728 >UniRef50_C1DJP1 Cyclic di-GMP signal transduction protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DJP1_AZOVD Length = 1104 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 113/376 (30%), Positives = 180/376 (47%), Gaps = 18/376 (4%) Query: 417 NKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE-----NVQTFTRKIAMVNDFDSSFG 471 + +++ +R+ + + + D +L+L + + RKI V D Sbjct: 730 DAVLKTASERLLKLVREGDTVARLGGDEFLILLADLEQPADADAVARKI--VGSLDCPIV 787 Query: 472 YRNLRIHKSAICE----PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEEN 527 + +IH S P GE A + +A+ ++ + + F A E + Sbjct: 788 VQERKIHLSGSIGVSLFPRDGETADELIDNADMAMYRAKELGRNTYQFFTRAMSLETQRR 847 Query: 528 IWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDI 587 + + +R A G+L LVYQP V + I G EAL RW E GI+SP FI IAED Sbjct: 848 VDLEIKLRGAATAGQLQLVYQPKVSLENGGISGCEALLRWHHPELGIVSPEHFIPIAEDS 907 Query: 588 GFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGL 647 G I +G +++TA + R + A L + +NVS Q + T ++E GL Sbjct: 908 GLIVPIGDWVLRTACMQARAWMD-AGLP-PVCVAVNVSTRQFLQQDVVAWVTRTLRETGL 965 Query: 648 KANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKV 707 A L +E+TE++I R E I+QL+ GV++SIDDFGTG S+L D++K+ Sbjct: 966 PAARLELELTESLIARDIEKVTATIDQLKDIGVKLSIDDFGTGYSSLNYLKRFRVDTLKI 1025 Query: 708 DSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQ 765 D F ++ IV + LA + VIAEGVE+E +R L GC + QG+ + Sbjct: 1026 DQSFVRNMLTEMEDETIVLAVIALAHNLKFKVIAEGVETEQHSRFLCSNGCDEIQGHYFS 1085 Query: 766 KPMPFSAWD---KSGK 778 +P+ A++ ++GK Sbjct: 1086 EPVTAEAFETMLRAGK 1101 >UniRef50_C9NJG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=20 Tax=Streptomyces RepID=C9NJG7_9ACTO Length = 724 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 77/236 (32%), Positives = 130/236 (55%), Gaps = 5/236 (2%) Query: 537 AMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQ 596 A++ GE F+ YQP+V + ++ GAEAL RW + G++ P +FI +AE G I LG Sbjct: 474 ALDRGEFFIEYQPLVHLGDGSVHGAEALVRWCHPQHGVLGPDRFIPLAEHTGLIVPLGRW 533 Query: 597 IIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEI 656 +++ ++ + + +R + +++N+SP QL+ P +++ +GL+ +LC+E+ Sbjct: 534 VLEESVRQANFWKERHTDGGPLRINVNLSPTQLHHPSLVAETVDVLERSGLEPGALCLEV 593 Query: 657 TETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF 716 TE+ + ++ + QL + GV I++DDFGTG SNL + +K+D FT + Sbjct: 594 TESALIGADDDLLKPLRQLAEMGVDIALDDFGTGYSNLANLRRLPVSVLKLDRSFTQGMQ 653 Query: 717 GTAG-----KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKP 767 KIV I LA + V EGVE+ A +L ++GC AQG+ Y +P Sbjct: 654 HHPADPVDLKIVEGIVSLAHSLDLAVTVEGVETGAQAEQLRQIGCDTAQGWYYARP 709 >UniRef50_C1CX76 Putative diguanylate cyclase/phosphodiesterase; putative membrane protein n=1 Tax=Deinococcus deserti VCD115 RepID=C1CX76_DEIDV Length = 757 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 101/349 (28%), Positives = 171/349 (48%), Gaps = 39/349 (11%) Query: 421 RKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKS 480 R+L Q ++ Y + VT +A + + LC D+S RN I Sbjct: 425 RRLLQALSRPYTVGTESVTLSASIGVTLCP------------AESVDASEALRNADI--- 469 Query: 481 AICEP-LQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAME 539 A+ E +G N+ + +++ I ++++ IE + R A+E Sbjct: 470 AMYEAKRRGRNSVQF---------------YNQHIEKQTSEIHRIEVQL------RGAIE 508 Query: 540 IGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIK 599 GEL +VYQP+V +++R + AEAL RW S G +SP FI +AE G I+ +G ++ Sbjct: 509 RGELRVVYQPLVSLDSRQVRSAEALLRWDSPVLGPVSPAVFIPVAEQRGLIHAIGSWVLD 568 Query: 600 TAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITET 659 TAMG+ + RA+ D + +NVSP Q F + + + L ++L +E+TE Sbjct: 569 TAMGQLSVW--RATGHPDLSVSVNVSPLQFERDDFIAQVRAALDRHHLPGSALTLELTEG 626 Query: 660 VIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA 719 + + + + QLR G+++++DDFGTG S+L ++ D +K+D F I Sbjct: 627 SLLTDFDASNIKLRQLRALGIQVALDDFGTGYSSLAYLRTLHVDIVKIDRSFIWAIQDDG 686 Query: 720 GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 V I +A + ++ ++AEG+E+ + L L C QGYL+ KP+ Sbjct: 687 LTFVEAIVRIAHHLKLRIVAEGIETLEQCSSLQHLSCDLGQGYLFAKPL 735 >UniRef50_A6W5K6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W5K6_KINRD Length = 593 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 81/255 (31%), Positives = 134/255 (52%), Gaps = 6/255 (2%) Query: 519 AKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPL 578 A L+ + +A ++RHA+ G L L QP+VD+ +G EAL RW +RG + P Sbjct: 317 ALLDAAHDRAELAADLRHAVATGGLHLALQPLVDLAAGRTVGFEALVRWQHPQRGNVPPS 376 Query: 579 KFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERF 638 F+ +AE+ G I +LG ++++A+ QRA+ + + +N+S QL +P Sbjct: 377 VFVEVAEESGTILDLGAFVLESALEALVEL-QRAAGRSGLEVSVNLSGHQLQQPGLVAAV 435 Query: 639 TTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFY 698 ++ +GL LC+E+TE+V +++LR GVRI++DDFGTG S+L Sbjct: 436 VDALRRHGLAPGQLCLEVTESVAVADLATARNTLQELRSHGVRIALDDFGTGYSSLSYLR 495 Query: 699 EINPDSIKVDSQFTGDIFG-----TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIK 753 + D +K+D F D+ G T ++ I L+ + +AEG+E+E + Sbjct: 496 RLPVDVLKIDKSFVDDVSGERADATGAAVLSGIVALSSALGLVTVAEGIETEQSHEVVRG 555 Query: 754 LGCVQAQGYLYQKPM 768 GC QGYL+ +P+ Sbjct: 556 AGCTWGQGYLFARPL 570 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 119/457 (26%), Positives = 203/457 (44%), Gaps = 26/457 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGF---------IKNM 383 I +K EG ++ + I MK E L L S+D +G ++N Sbjct: 442 IAPVKDDEGKTTHFVAAMSDITPMKQYE----TTLHRLASHDVLTGLPNRALLQDRLENA 497 Query: 384 AIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + N + V ++ L + V G + +++ + R+ + + D Sbjct: 498 IAYSARNGHAVWVVLVDLDRFKFVNDTMGHQAGDVLLKIISDRLQASVRESDTVARLGGD 557 Query: 444 LYLLL---CRENVQTFTRKI------AMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSY 494 ++L+ C + ++ + A+V L P G + + Sbjct: 558 EFVLVLPECGDGPSGYSSDVIQRIMEAVVKPLTIQGSEFFLSCSMGIAVYPNDGADPTTL 617 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 +A+ ++ + F F A ++ E + I +RHA+E+ EL L YQP VD++ Sbjct: 618 LAHADVAMYRSKELGRNNFQFYTPAMNDQALERLRIEGELRHAIELNELVLHYQPQVDLH 677 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 T AI+G EAL RW G++ P FI++AE+ G I +G +++TA + + + Sbjct: 678 TGAIVGLEALVRWNHPILGMVQPGSFISLAEETGLIIPIGAWVLQTACRQAKAWQDMGFT 737 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 + + +N+S Q + E ++E GL+A L +E+TE+ + E L + Sbjct: 738 Q--LRIAVNLSARQFTQASLLESIKDTLQETGLEARFLEIELTESSVMADIERNILTLRD 795 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARY 732 L+ GV++S+DDFGTG S+L D++K+D F DI IV I LA Sbjct: 796 LKSLGVQLSVDDFGTGHSSLAYLKRFPIDTLKIDRSFVRDIAINQDDASIVSSIISLAHN 855 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 ++ VIAEGVE+ L GC + QGY + KP+P Sbjct: 856 LKLNVIAEGVETASQMDILRAQGCNEIQGYYFCKPLP 892 >UniRef50_A1S1U8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S1U8_SHEAM Length = 1069 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 104/394 (26%), Positives = 193/394 (48%), Gaps = 16/394 (4%) Query: 389 NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLL- 447 ++ + LAV ++ L + + G D + +++ + +R+ I D +++ Sbjct: 657 HDGRKLAVMVLDLDRFKYINDTQGHDCGDLLLKAVAKRLQTVMGSTDFIARLGGDEFVIV 716 Query: 448 ---LCREN-VQTFTRKI--AMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKLA 501 L +E+ V+ + +++ +M + F G ++ P G + + + A Sbjct: 717 LPRLAQEHAVEQYAKRLLQSMGDPFKVEQGSMSVSASLGIGLYPQDGLDVETLLSNAETA 776 Query: 502 ISSIRDHMFSEF-IFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILG 560 + +D + F F + L IE + + R++R A+ E L YQP+VD+ + + Sbjct: 777 MYGAKDEGRNHFKYFTQEMNLALIE-RLGMERDLRRAVANDEFCLFYQPVVDMESGEVTS 835 Query: 561 AEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLL 620 EAL RW E+G++SP++FI +AED+G + ELG ++ A+ + +L + Sbjct: 836 LEALLRWQDPEQGLVSPVRFIPVAEDMGLMGELGQWVMDKALADLARLH---TLGFGLSM 892 Query: 621 HINVSPWQLN--EPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQ 678 INVS Q + E+ + + +G+ L VEITE+++ + H + +R Sbjct: 893 AINVSACQCHCKRQSLDEQLRSALSRHGIAPRHLHVEITESLLLDNSHHCLDTLNNIRDL 952 Query: 679 GVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNRIP 736 G I +DDFGTG S+L + +IK+D F + G + +VR I ++++ + Sbjct: 953 GCAIYLDDFGTGYSSLSYLKKFPISAIKIDKSFVEQLPGCESDASLVRAIVNMSKSLGMK 1012 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMPF 770 ++AEG+ES+D L LG QGYLY +P+PF Sbjct: 1013 LVAEGIESKDQQAFLQALGSQFGQGYLYSRPLPF 1046 >UniRef50_C6X759 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X759_METSD Length = 765 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 85/255 (33%), Positives = 133/255 (52%), Gaps = 14/255 (5%) Query: 530 IARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGF 589 ++ ++RHA+ EL + YQPIVD+ T I AEAL RW RG++ P +FI +AE+ G Sbjct: 495 VSNDLRHALNRHELVMYYQPIVDLATNEIHKAEALVRWQHPTRGLVPPFEFIPVAEETGM 554 Query: 590 INELGYQIIKTAMGEF-----RHFSQRASLKDD-------FLLHINVSPWQLNEPHFHER 637 IN +G + + + + + R++ + F + INVSP Q + Sbjct: 555 INRMGDWVFRQSARDTVTLVQESLASRSAPPEGNVVDATIFQVSINVSPLQFQSSQELQT 614 Query: 638 FTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRF 697 + + + GL A L +EITE ++ ++ + Q R G+ SIDDFGTG S+L Sbjct: 615 WQAYLDQIGLPAECLAIEITEGLLLEASDQVKATLTQFRDAGIATSIDDFGTGYSSLAYL 674 Query: 698 YEINPDSIKVDSQFTGDIFGTAGKIV--RIIFDLARYNRIPVIAEGVESEDVARELIKLG 755 + + D +K+D F ++ +V +I D+A + VIAEGVE+E L + G Sbjct: 675 KKFHIDFVKIDRSFVQNLGAGNDDMVLCEVIVDMAHRLGMRVIAEGVETEAQLELLKRAG 734 Query: 756 CVQAQGYLYQKPMPF 770 C AQGYL+ +PF Sbjct: 735 CDFAQGYLFSPALPF 749 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 91/287 (31%), Positives = 146/287 (50%), Gaps = 4/287 (1%) Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELF 544 P G+ ++ A+ + H S F + D E+ + + ++ A+ + EL Sbjct: 800 PEHGQTPKELLQQADAAMYRAKAHGRSCFRYFSDELTRAAEQRLDLEVRLQRALRLNELC 859 Query: 545 LVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGE 604 L +QP +DI++ I+GAEAL RW G+ISP +FI +AE+ G I +LG ++ A + Sbjct: 860 LYFQPQIDISSNRIIGAEALVRWQDPAHGLISPAQFIPVAEETGLIKQLGEWVLLEACRQ 919 Query: 605 FRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERI 664 + + Q+ + L +N+SP Q + E +K+ G A+ L +E+TE+ + Sbjct: 920 GKEWQQKGLPAIN--LAVNISPVQFRNSNILESVFNALKQTGYPASLLELELTESALMTH 977 Query: 665 NEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KI 722 + LRK G+R++IDDFGTG S+L D +K+D F DI +I Sbjct: 978 ENEAVEILSALRKYGIRLAIDDFGTGYSSLAYLKRFPLDVLKIDKSFVDDIPHKKDDMEI 1037 Query: 723 VRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 I +A R+ V+AEGVE+E+ L + GC QGYL P+P Sbjct: 1038 AAAIVAMAHTLRLKVLAEGVETEEQLTFLKEQGCDCYQGYLMSPPVP 1084 >UniRef50_Q1YLJ5 Possible signaling protein with EAL domain n=2 Tax=Aurantimonadaceae RepID=Q1YLJ5_MOBAS Length = 828 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 107/400 (26%), Positives = 179/400 (44%), Gaps = 18/400 (4%) Query: 388 SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLY-- 445 + L + +I + G + + +G + I+R+ R+ EK + + + Sbjct: 404 GKGRKALTIAVIDIRGFKTINDTYGHPVGDAILRQCGARLIEKAGTKATVARLGGNEFAV 463 Query: 446 -LLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICEPL---QGE-----NAWSYAE 496 LL R +MV FD F I + L G+ +A + Sbjct: 464 ILLGGRSAADAEDLARSMVASFDEPFEVEGRHISAAGSVGALYVAGGKRPVDLDAAIALQ 523 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 LA+ + S + + ++++ + +++ A+E G+ L YQP VD R Sbjct: 524 NCDLALYQAKQSAGSSYRMFQPSMRQKLQQRRELEIDLQKAIEEGQFELFYQPFVDTGRR 583 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 AI G EAL RW ERG +SP FI +AE+ G I +G ++TA Q ++ Sbjct: 584 AISGFEALLRWNHPERGRVSPSTFIPLAEETGMITPIGLWALETAC------EQASNWVS 637 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 D + +N+S Q P ++ ++GL+ + L +E+TE++ + + + R Sbjct: 638 DLAISVNLSAVQFKSPTLVADVRRVLAKSGLQPSRLQIEVTESLFLDEGDKVLSILTEFR 697 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG-KIVRIIFDLARYNRI 735 + G+ IS+DDFGTG S+L D IK+D F D+ IVR + L+ + Sbjct: 698 RMGLTISMDDFGTGYSSLGYLNRFPFDKIKIDQSFVRDMSRPENIAIVRSVIGLSNALDM 757 Query: 736 PVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 VIAEG+E+ + R L GC + QGY + +P P S K Sbjct: 758 RVIAEGIETPEQMRILYAEGCREMQGYYFSRPRPASDLPK 797 >UniRef50_B8GPC4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPC4_THISH Length = 761 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 114/444 (25%), Positives = 200/444 (45%), Gaps = 28/444 (6%) Query: 360 EIERSNKLLSLISYDQESGFIKNMAIIESNNNQYL----------AVGIIKLCGLEAVEA 409 E E++ + L+ ++Y + N + + +Q + A+ I L + V Sbjct: 318 EREQAQERLNELAYSDSLTHLPNRTLFQDRLHQAMEYAKRHERLIALLFIDLDDFKRVND 377 Query: 410 VFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR-----ENVQTFTRKIAMVN 464 G +++++++ +R + + D + ++ E+ TF RK +++ Sbjct: 378 SLGHAAGDRLLQEIARRFGRVLRETDTLARLGGDEFTVILTDIQRPEDAVTFVRK--LLD 435 Query: 465 DFDSSFGYRNLRIHKSA-ICEPLQGENAWSYAEKLKLAISSI---RDHMFSEFIFCDDAK 520 + F I SA I L + + A+ LK A +++ + + F F Sbjct: 436 TLRAPFMLGEQSITMSASIGITLYPSDDTAEADLLKDADTAMYQAKSRGKNTFDFYAPEL 495 Query: 521 LNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKF 580 + + + ++R A++ + L YQPIV +N + G EAL RW RG++ P +F Sbjct: 496 TQSVRARLTMEGDLRAALDTNQFLLHYQPIVSLNGAGVQGLEALVRWQHPVRGLVPPDEF 555 Query: 581 ITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTT 640 I +AED G I+E+G +I A + + R L IN+SP Q R Sbjct: 556 IPVAEDSGLIHEIGDWVIDAACAQLAQWDARG--LSHLTLAINLSPVQFRRDGLVSRIAR 613 Query: 641 IMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEI 700 ++++ + + L +EITE+++ N H ++ L G+ + IDDFGTG S L Sbjct: 614 RLRQHSIASERLHLEITESLLMEQNRHVAETLQTLDAMGIGLCIDDFGTGYSALNYLRHF 673 Query: 701 NPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQ 758 +KVD F D+ +VR I +A R+ V+AEGVE + L ++GC Q Sbjct: 674 PIRQLKVDRSFVEDMLHAEDTRALVRAIVLMAHALRLEVVAEGVEEKSQLELLREMGCDQ 733 Query: 759 AQGYLYQKPMP---FSAWDKSGKL 779 QGYL +P+P W +S +L Sbjct: 734 VQGYLLSRPLPAAEIPGWIESQRL 757 >UniRef50_B8GNC0 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GNC0_THISH Length = 655 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 90/286 (31%), Positives = 148/286 (51%), Gaps = 4/286 (1%) Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELF 544 P G +A K A+ +D S + F A + + + ++RHA+E E Sbjct: 351 PQDGRSAEQLIMKADTAMYQAKDQGRSNYQFYTSALTLAANDRLALETSLRHALEREEFT 410 Query: 545 LVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGE 604 L YQP V ++G EAL RW ++G+ +P FI +AE+ G I LG +++TA + Sbjct: 411 LHYQPRVRTQDDVMIGMEALVRWHHPDKGLTAPDAFIPMAEETGLITPLGLWVLRTACRQ 470 Query: 605 FRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERI 664 + + + + + +N+S QL +P + I+++ GL A+SL +E+TE+V+ Sbjct: 471 AQTWMR--LYGEPIHMAVNLSMRQLRQPDLVSQIDAILRDTGLPASSLELELTESVLMAG 528 Query: 665 NEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KI 722 + H + +L+ GVR++IDDFGTG S+L + D++K+D F DI A I Sbjct: 529 DGHTLTALAELKALGVRLAIDDFGTGYSSLAYLKRLPIDALKIDRSFVSDIPHDASDMAI 588 Query: 723 VRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 I +AR + V+AEGVE+ + L K GC QG+ + P+ Sbjct: 589 ASTIIAMARTLGLEVVAEGVETPEQLAFLKKEGCDSYQGFGFSPPV 634 >UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=C6XEG9_METSD Length = 718 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 88/257 (34%), Positives = 146/257 (56%), Gaps = 7/257 (2%) Query: 526 ENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAE 585 E + + +R+A+ E L YQP +++ T+ I G EAL RW + +G+ISP +FI IAE Sbjct: 460 ERLEMEYQMRNALGHNEFHLHYQPKLNLRTQRITGVEALIRWHNPRQGLISPNRFIPIAE 519 Query: 586 DIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKEN 645 + I ++G +++ A E SQ + D + +NVSP Q + + + +++E Sbjct: 520 ESSLIEQIGSWVLEKACMESIALSQLSGY--DVPVSVNVSPRQFQQSNLVGNISRVLQET 577 Query: 646 GLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSI 705 GLK + L +EITE + + F + L+ G++++IDDFGTG S+L D++ Sbjct: 578 GLKPSLLELEITEGTLADTSPQFIKVLNDLKGLGIKLAIDDFGTGYSSLGYLKHFPIDNL 637 Query: 706 KVDSQFT-GDIFGTAGK-IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYL 763 K+D F G TA + I++ I L I ++AEGVE+E L+ +GC + QG+L Sbjct: 638 KIDRSFVMGLESDTANQAILKAIVALGHNLGINLVAEGVETERQRDFLLSIGCDEMQGFL 697 Query: 764 YQKPMPFSAWDKSGKLV 780 + +P+PF D++GKL+ Sbjct: 698 FSQPLPF---DQAGKLL 711 >UniRef50_C7MR68 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=2 Tax=Actinomycetales RepID=C7MR68_SACVD Length = 919 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 88/261 (33%), Positives = 141/261 (54%), Gaps = 15/261 (5%) Query: 518 DAKLNE-IEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIIS 576 D +L E ++ + + +++R ++ G+L++ YQP+VD+ T+ + E L RW G IS Sbjct: 659 DVELRERVQRQLRLEQDLRESVRGGQLWVAYQPVVDLRTQQRVAVEGLLRWDHPVHGRIS 718 Query: 577 PLKFITIAEDIGFINELGYQIIKTAMGEF----RHFSQRASLKDDFLLHINVSPWQLNEP 632 P +FI +AE+ IN +G +++TA E RH R L +NVS QL++ Sbjct: 719 PGEFIPLAEESDLINLIGGHMLRTATRELASRRRHSGVRTQLA------VNVSARQLDDG 772 Query: 633 HFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLS 692 ++ GL LC+EITE+ + + E + LR GVR++IDDFGTG S Sbjct: 773 SVVSAVNEALRATGLPPGELCLEITESALMQEPEAAADVLTALRDLGVRLAIDDFGTGYS 832 Query: 693 NLKRFYEINPDSIKVDSQFTGDIFGT----AGKIVRIIFDLARYNRIPVIAEGVESEDVA 748 +L + +++ D++K+D F + G A I++ I +A + V+AEG E+E Sbjct: 833 SLAQLWKLPLDTLKIDRSFVAGLDGPNHPDAEAIIKGIITMAHSMGLTVVAEGTENERQI 892 Query: 749 RELIKLGCVQAQGYLYQKPMP 769 L +LGC QAQG+ KP P Sbjct: 893 AILRELGCDQAQGFHLGKPAP 913 >UniRef50_A5PE71 Sensory box/GGDEF family protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PE71_9SPHN Length = 749 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 90/240 (37%), Positives = 127/240 (52%), Gaps = 8/240 (3%) Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 ++R A+ G+L L +QP++D+ T ILG EAL RW ERG+I P +FI +AE G I E Sbjct: 505 DLRTALTDGDLRLHFQPLMDLQTNKILGYEALVRWHHPERGLILPDEFIPLAEQTGLIVE 564 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 LG +I+ A R L + + IN+SP QL + + G+ + L Sbjct: 565 LGEWVIREAAATAR------LLPGELTISINLSPAQLRSSQLLATVVSAVAHAGIAPSRL 618 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +EITE V +E + +LR GVRI++DDFGTG S+ ++IK+D F Sbjct: 619 ELEITEGVFLEDSEDCMRILRELRTFGVRIALDDFGTGYSSFGYLRRFPFNTIKIDRSFV 678 Query: 713 GDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPF 770 ++ + +IVR I DLA + V AEG+E L LGC QG+L KPMPF Sbjct: 679 AELRESDDCRRIVRAISDLAHGMGMSVTAEGIEDVSQLSMLRDLGCEVGQGFLLGKPMPF 738 >UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SHX8_LEPBA Length = 818 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 89/247 (36%), Positives = 134/247 (54%), Gaps = 4/247 (1%) Query: 525 EENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIA 584 E+ ++I ++R A++ EL L +QP + T + GAEAL RW ERG + P++FI +A Sbjct: 556 EKRLYIENSLRKAIQNEELLLFFQPKISTITNQVCGAEALIRWKHPERGWVPPIEFIPVA 615 Query: 585 EDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKE 644 ED G I +G +++ A + +S++ F L INVS QL ++ R + + Sbjct: 616 EDSGIIERIGDWVLEEACRLKKQWSEKNL--PSFPLSINVSGKQLARANWSHRVQATILQ 673 Query: 645 NGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDS 704 G+ + +E+TE+ I E E L + G+++SIDDFGTG S+L +IN D Sbjct: 674 YGINPEEIELELTESSIMENPEKSIEAFEYLSELGIKVSIDDFGTGYSSLSYLKKINADV 733 Query: 705 IKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGY 762 IK+D F D+ I + I ++A + VIAEGVE+ L LGC QGY Sbjct: 734 IKIDRSFVVDLELNEDDRAICKAIINMAHSLGLEVIAEGVENPAQRDLLHDLGCHMIQGY 793 Query: 763 LYQKPMP 769 LY KP+P Sbjct: 794 LYSKPLP 800 >UniRef50_A3ITH6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with Response Regulator Receiver modulation n=1 Tax=Cyanothece sp. CCY0110 RepID=A3ITH6_9CHRO Length = 635 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 83/226 (36%), Positives = 127/226 (56%), Gaps = 2/226 (0%) Query: 545 LVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGE 604 L YQPIV + TR I G EAL RW G ISP KFI IAE+ IN LG+ I+K + Sbjct: 392 LYYQPIVHLKTRKINGFEALLRWQHPTEGWISPQKFIPIAEETQLINPLGWWILKQVCQQ 451 Query: 605 FRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERI 664 +++++ D ++INVS Q + +F E+ I++E+ L SL +EITE+ Sbjct: 452 MSYWTKQFPNHDSLRVNINVSAIQFKQDNFVEQIGLIIQESHLPPESLKLEITESYTLNT 511 Query: 665 NEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKI-- 722 + +++L+ G+ + IDDFG G S L R E+ +++K+D F + + Sbjct: 512 ENYSLEKLQKLKDMGIHLCIDDFGVGYSCLNRLQELPVNTLKIDRSFLQKLNQCNPNLQF 571 Query: 723 VRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 V+ I LA I V+AEG+E++ + L +LGC+ QGYL+ KP+ Sbjct: 572 VKAILMLASSLEIEVVAEGIETKTQLQYLQELGCLLGQGYLFSKPI 617 >UniRef50_Q7MDD2 Predicted signal transduction protein n=2 Tax=Vibrio vulnificus RepID=Q7MDD2_VIBVY Length = 833 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 89/267 (33%), Positives = 135/267 (50%), Gaps = 8/267 (2%) Query: 512 EFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAE 571 + +F D A + I EN+ + +R A+ EL + QP V T+ + AEAL RW E Sbjct: 551 QVVFYDSALVTAIPENLSLLSELRRALLQNELRVFLQPKVMATTKVVSSAEALIRWQHPE 610 Query: 572 RGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNE 631 RG+++P F+ AE G++ EL +I+ + +H+ + L + +N+S W L Sbjct: 611 RGLLAPFFFVPFAEQTGYVRELTRWMIQQVI---QHWRELQPLSGQLTISVNLSTWDLIN 667 Query: 632 PHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGL 691 P + + E + A+ LC+EITE+ I E L + QL + G +SIDDFGTG Sbjct: 668 PQLLDDLQHWLSEYHVPASGLCLEITESAIMEDPETSELTLLQLSQMGFHLSIDDFGTGY 727 Query: 692 SNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIPVIAEGVESEDVAR 749 S+L + + +KVD F ++ IV LA + V+AEGVES + Sbjct: 728 SSLGYLQRLPVNELKVDKSFVLNMLENPNDKVIVSSTIQLAHSLGLQVVAEGVESYALFT 787 Query: 750 ELIKLGCVQAQGYLYQKPMP---FSAW 773 L +LGC + QGY KP+ F AW Sbjct: 788 SLRELGCDEIQGYCVSKPIALEEFIAW 814 >UniRef50_A1S1N8 GGDEF domain protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1S1N8_SHEAM Length = 817 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 92/273 (33%), Positives = 143/273 (52%), Gaps = 4/273 (1%) Query: 500 LAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAIL 559 +A+ + +D + D ++ EN+W+ +RHA+E +L LV+QPI + + ++ Sbjct: 530 MAMYAAKDGGRNGCALYSDELEDKATENLWLQNELRHAIEREQLSLVFQPIFNHDGE-LV 588 Query: 560 GAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFL 619 EALCRW ERG ISP +FI +AED G I +G ++ + S++ + Sbjct: 589 CCEALCRWHHPERGPISPAQFIPVAEDSGLIIGIGQWVLLEVCRTLKAMSEKGTPMP--A 646 Query: 620 LHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQG 679 + +N+S N+ F ER ++K + + + +E+TE + +++LR G Sbjct: 647 VAVNISARHFNQIDFVERLLALLKAHQVSPAQIELELTEYALLSNLNAISERMQRLRSAG 706 Query: 680 VRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG-KIVRIIFDLARYNRIPVI 738 I+IDDFGTG S+L + +K+D+ F G I AG IVR I D+A + V+ Sbjct: 707 FSIAIDDFGTGYSSLSYLQSLPLSRLKLDAAFVGRIGTEAGNAIVRAIVDMAHSLMLKVV 766 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPMPFS 771 AEGVE+E L L C QGYL KPMP S Sbjct: 767 AEGVETEAQQAYLSSLECDFFQGYLLGKPMPAS 799 >UniRef50_B7KJT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KJT7_CYAP7 Length = 812 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 78/246 (31%), Positives = 140/246 (56%), Gaps = 3/246 (1%) Query: 526 ENIW-IARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIA 584 + +W + +++ A+E E L YQPI+ + T ++G EAL RW +RG+ISP+ FI +A Sbjct: 553 QALWELENHLKLAIERQEFLLYYQPILSLKTLTVIGFEALIRWQHPQRGLISPVHFIPVA 612 Query: 585 EDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKE 644 E+ I +G +++ + + + ++ + +++N+S QL + +F + ++++ Sbjct: 613 EETDLIVAIGEWVLQQSCQQLSAWREKYPQANHLTINVNLSNRQLEKDNFVYKLDNVLQQ 672 Query: 645 NGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDS 704 GL A L +EITET++ + QL+++ + ISIDDFGTG S+L + S Sbjct: 673 TGLPATQLKLEITETLLMTNLAAAIATLSQLKQRNINISIDDFGTGYSSLNYLCRLPVSS 732 Query: 705 IKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGY 762 +K+D F ++ + +I++ I L I VIAEG+E++ +L +LGC QGY Sbjct: 733 LKIDRSFVANVHEDSKNLQIIQTILSLGEQLMIEVIAEGIETQKHLEQLQELGCQYGQGY 792 Query: 763 LYQKPM 768 L+ KP+ Sbjct: 793 LFSKPV 798 >UniRef50_B1KIP0 Diguanylate cyclase/phosphodiesterase n=3 Tax=Shewanella RepID=B1KIP0_SHEWM Length = 796 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 101/396 (25%), Positives = 189/396 (47%), Gaps = 14/396 (3%) Query: 390 NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC 449 NN + V + L + V G +++++ +R+ + F D +L++ Sbjct: 392 NNTKVLVMFLDLDNFKQVNDTVGHHAGDELLKLTSKRLLNSVRNTDTVARFGGDEFLIII 451 Query: 450 RE-NVQTFTRKIA--MVNDFDSSFGYRNLRIHKSAICE----PLQGENAWSYAEKLKLAI 502 E Q + +A ++ F+ +F S P G+ A + +K ++ Sbjct: 452 PELPHQNMAKMLASSILTLFEQAFKIEGQEFFVSTSIGMSIYPQDGDTAATLLKKADTSL 511 Query: 503 SSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAE 562 +D + F F +D+ +I+ + + + A+ + ++ + YQPI+D+ +R I+GAE Sbjct: 512 YRAKDAGRNGFSFYNDSMNQDIQRKLTLNVRLHQAISLDDIEIYYQPILDLASRKIIGAE 571 Query: 563 ALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHI 622 AL RW +E G++SP +FI +AE G I++LG +++ A + + LK + I Sbjct: 572 ALMRWTDSELGVVSPDEFIPLAEKNGLIHKLGDIVLQRACSQAASWQSITPLK----MAI 627 Query: 623 NVSPWQLN-EPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVR 681 N S Q R ++ + GL A+ L +E+TE+++ + L++ G+ Sbjct: 628 NFSSVQFRYSEQLQARIVEVLAQTGLPADKLDMEVTESLLIDQESGLMTMLAYLKQLGIE 687 Query: 682 ISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIA 739 +SIDDFGTG S L + + +K+D F + + +V I +A+ + V+A Sbjct: 688 MSIDDFGTGYSALSYLQKFSFSKLKIDRAFINKMASSKSDKALVTAILAMAKSLEMKVVA 747 Query: 740 EGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 EG+E E A+ L GC QGYL+ +P+ A+ + Sbjct: 748 EGIEDEQQAQFLQSHGCEFGQGYLFSRPVTAEAFTQ 783 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P75800 Uncharacterized protein yliE n=57 Tax=cellular o... 969 0.0 UniRef50_B7LP31 Putative uncharacterized protein yliE n=1 Tax=Es... 788 0.0 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 649 0.0 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 646 0.0 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 646 0.0 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 638 0.0 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 638 0.0 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 636 e-180 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 636 e-180 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 634 e-180 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 631 e-179 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 631 e-179 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 631 e-179 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 629 e-178 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 626 e-178 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 626 e-177 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 626 e-177 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 623 e-177 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 622 e-176 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 622 e-176 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 621 e-176 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 620 e-176 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 620 e-176 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 620 e-176 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 619 e-175 UniRef50_Q5E8Q7 GGDEF domain protein n=2 Tax=Vibrio fischeri Rep... 619 e-175 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 617 e-175 UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Cauloba... 617 e-175 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 617 e-175 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 616 e-174 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 615 e-174 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 615 e-174 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 615 e-174 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 614 e-174 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 613 e-174 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 613 e-173 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 613 e-173 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 612 e-173 UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/P... 612 e-173 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 611 e-173 UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 610 e-173 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 610 e-173 UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum... 609 e-172 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 608 e-172 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 608 e-172 UniRef50_Q0AAU4 Response regulator receiver modulated diguanylat... 607 e-172 UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling p... 607 e-172 UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacter... 607 e-172 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 607 e-172 UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 606 e-171 UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplast... 606 e-171 UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/P... 605 e-171 UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4... 605 e-171 UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 605 e-171 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 605 e-171 UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA a... 605 e-171 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 605 e-171 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 604 e-171 UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 604 e-171 UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/P... 604 e-171 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 604 e-171 UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/P... 604 e-171 UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/P... 604 e-171 UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/P... 604 e-171 UniRef50_C1DB08 Predicted signal transduction protein containing... 604 e-171 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 603 e-171 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 603 e-170 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 602 e-170 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 602 e-170 UniRef50_B8GNC0 Signal transduction protein containing a membran... 602 e-170 UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 601 e-170 UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 600 e-170 UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 ... 599 e-169 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 599 e-169 UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 599 e-169 UniRef50_D2LYI1 Diguanylate cyclase/phosphodiesterase with extra... 598 e-169 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 598 e-169 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 598 e-169 UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 598 e-169 UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 598 e-169 UniRef50_B8DLW6 Response regulator receiver modulated diguanylat... 597 e-169 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 597 e-169 UniRef50_Q2SF23 Predicted signal transduction protein containing... 597 e-169 UniRef50_B9M6C9 Response regulator receiver modulated diguanylat... 597 e-169 UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio... 597 e-169 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 597 e-169 UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 597 e-169 UniRef50_B1M2I6 Diguanylate cyclase/phosphodiesterase with PAS/P... 596 e-168 UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/P... 596 e-168 UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/P... 596 e-168 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 595 e-168 UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 595 e-168 UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 595 e-168 UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/P... 595 e-168 UniRef50_D2SGK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 594 e-168 UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 594 e-168 UniRef50_C1DCZ4 Predicted signal transduction protein containing... 594 e-168 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 594 e-168 UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 593 e-168 UniRef50_A1T0Y1 Response regulator receiver modulated diguanylat... 593 e-167 UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 ... 592 e-167 UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/P... 592 e-167 UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuni... 592 e-167 UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/P... 591 e-167 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 590 e-167 UniRef50_B8HRI7 Response regulator receiver modulated diguanylat... 590 e-167 UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuni... 590 e-167 UniRef50_C4XGB8 Putative response regulator receiver protein n=1... 590 e-167 UniRef50_D2L6G6 Response regulator receiver modulated diguanylat... 590 e-167 UniRef50_A0YYE1 Putative diguanylate cyclase/phosphodiesterase (... 590 e-167 UniRef50_B2UGH6 Diguanylate cyclase/phosphodiesterase with PAS/P... 590 e-167 UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 589 e-166 UniRef50_A1ALB3 Response regulator receiver modulated diguanylat... 589 e-166 UniRef50_Q74EC6 Sensory box/response regulator n=1 Tax=Geobacter... 589 e-166 UniRef50_B1XX17 Diguanylate cyclase/phosphodiesterase with PAS/P... 589 e-166 UniRef50_A1KBA9 Conserved hypothetical signaling protein n=1 Tax... 589 e-166 UniRef50_C4KCC9 Response regulator receiver modulated diguanylat... 589 e-166 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 588 e-166 Sequences not found previously or not previously below threshold: UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 649 0.0 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 641 0.0 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 641 0.0 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 639 0.0 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 636 e-180 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 635 e-180 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 635 e-180 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 634 e-180 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 630 e-179 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 630 e-179 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 629 e-178 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 627 e-178 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 627 e-178 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 627 e-178 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 627 e-178 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 624 e-177 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 624 e-177 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 623 e-177 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 621 e-176 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 621 e-176 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 620 e-176 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 620 e-176 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 620 e-176 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 620 e-176 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 619 e-175 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 618 e-175 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 618 e-175 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 617 e-175 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 617 e-175 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 616 e-175 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 616 e-175 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 615 e-174 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 614 e-174 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 614 e-174 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 614 e-174 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 614 e-174 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 614 e-174 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 613 e-174 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 613 e-174 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 613 e-174 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 612 e-173 UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 612 e-173 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 612 e-173 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 612 e-173 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 611 e-173 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 611 e-173 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 611 e-173 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 611 e-173 UniRef50_A8FYM5 Signal transduction protein containing a membran... 610 e-173 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 610 e-173 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 610 e-173 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 609 e-172 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 609 e-172 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 608 e-172 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 608 e-172 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 607 e-172 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 607 e-172 UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/P... 607 e-172 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 606 e-171 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 606 e-171 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 605 e-171 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 605 e-171 UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/P... 605 e-171 UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 605 e-171 UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curviba... 604 e-171 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 604 e-171 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 604 e-171 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 604 e-171 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 604 e-171 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 603 e-171 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 603 e-171 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 602 e-170 UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/P... 602 e-170 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 602 e-170 UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/P... 601 e-170 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 601 e-170 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 601 e-170 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 600 e-170 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 600 e-170 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 600 e-170 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 600 e-170 UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/P... 599 e-169 UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=ce... 599 e-169 UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=unc... 599 e-169 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 599 e-169 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 599 e-169 UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID... 599 e-169 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 599 e-169 UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 599 e-169 UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/P... 599 e-169 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 598 e-169 UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/P... 598 e-169 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 597 e-169 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 597 e-169 UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/P... 597 e-169 UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/P... 597 e-169 UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 597 e-169 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 597 e-169 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 596 e-169 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 596 e-169 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 596 e-168 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 596 e-168 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 595 e-168 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 595 e-168 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 595 e-168 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 595 e-168 UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC 595 e-168 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 595 e-168 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 594 e-168 UniRef50_B6IWY2 Diguanylate cyclase, putative n=1 Tax=Rhodospiri... 594 e-168 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 594 e-168 UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 594 e-168 UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 594 e-168 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 594 e-168 UniRef50_A0L8P4 Response regulator receiver modulated diguanylat... 592 e-167 UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/P... 592 e-167 UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodie... 592 e-167 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 592 e-167 UniRef50_A1SZV0 Response regulator receiver modulated diguanylat... 592 e-167 UniRef50_B2UIB3 Diguanylate cyclase/phosphodiesterase with PAS/P... 592 e-167 UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/P... 592 e-167 UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 591 e-167 UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibac... 591 e-167 UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 591 e-167 UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extra... 591 e-167 UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter... 590 e-167 UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/P... 590 e-167 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 590 e-167 UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/P... 589 e-166 UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/P... 589 e-166 UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/P... 589 e-166 UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax... 589 e-166 >UniRef50_P75800 Uncharacterized protein yliE n=57 Tax=cellular organisms RepID=YLIE_ECOLI Length = 782 Score = 969 bits (2505), Expect = 0.0, Method: Composition-based stats. Identities = 773/785 (98%), Positives = 773/785 (98%), Gaps = 6/785 (0%) Query: 1 MLSLYEKIKIRLIILFLLAALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKD 60 MLSLYEKIKIRLIILFLLAALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKD Sbjct: 1 MLSLYEKIKIRLIILFLLAALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKD 60 Query: 61 IERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVV 120 IERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVV Sbjct: 61 IERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVV 120 Query: 121 YHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLH 180 YHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLH Sbjct: 121 YHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLH 180 Query: 181 INGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYN 240 INGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYN Sbjct: 181 INGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYN 240 Query: 241 SEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLV 300 SEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLV Sbjct: 241 SEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLV 300 Query: 301 VYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAE 360 VYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAE Sbjct: 301 VYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAE 360 Query: 361 IERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIV 420 IERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIV Sbjct: 361 IERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIV 420 Query: 421 RKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKS 480 RKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKS Sbjct: 421 RKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKS 480 Query: 481 AICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEI 540 AICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEI Sbjct: 481 AICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEI 540 Query: 541 GELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKT 600 GELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKT Sbjct: 541 GELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKT 600 Query: 601 AMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETV 660 AMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETV Sbjct: 601 AMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETV 660 Query: 661 IERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEI---NPDSIKVDSQFTGDIFG 717 IERINEHFYLNIEQLRKQGVRISIDDFGTG L NPDSIKVDSQFTGDIFG Sbjct: 661 IERINEHFYLNIEQLRKQGVRISIDDFGTG---LSNLKRFYEINPDSIKVDSQFTGDIFG 717 Query: 718 TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG Sbjct: 718 TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 Query: 778 KLVKE 782 KLVKE Sbjct: 778 KLVKE 782 >UniRef50_B7LP31 Putative uncharacterized protein yliE n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LP31_ESCF3 Length = 782 Score = 788 bits (2037), Expect = 0.0, Method: Composition-based stats. Identities = 300/773 (38%), Positives = 476/773 (61%), Gaps = 1/773 (0%) Query: 1 MLSLYEKIKIRLIILFLLAALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKD 60 M S+ EK+ +A +I L + + A + + EL++ N+ +F Sbjct: 1 MYSISEKVNSSFKFAITVAIAVYILLSLFTAFDFHKKIAESSSKNHQELLRNNLRNYFSK 60 Query: 61 IERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVV 120 +E+ A LKD+LYLL++ EEI+RA+I +M + ++ VGL++++ KYY F R +I + Sbjct: 61 VEKEADALKDALYLLQDEEEIKRALIHRMAKIEGINLVGLMMNNGKYYSFIRTPGGEIKL 120 Query: 121 YHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLH 180 + PL G VI +FNP RPW+ + + W Y+C+ PGKKC +F+L Sbjct: 121 QAKFVPGRPLTGADGEVIDENFNPLSRPWNDIPPGAVSKWASWYDCYGMPGKKCFTFSLS 180 Query: 181 INGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYN 240 + + + A+ IH+DL+ +YL +L+ +++FL+ II N+ + LI+ + Sbjct: 181 PSENEKNNFAIKLIHLDLDEKYLTNFLNAQGKPGDIIFLENNGRIIGGNEESTLHLIVKD 240 Query: 241 SEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLV 300 + G Y + D EY EK +P + +++Y + L+ +K F L F I+ + Sbjct: 241 TNGEYRTSNDTD-EYFEKVIILPKLPDVKFHYFYSLNSKLSYLNKSFVLMFMSGIVCFFL 299 Query: 301 VYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAE 360 ++ + + R+ E +LV L L +S + + + I D++EI+ +K I + + Sbjct: 300 LWYIIIVITRKISGESGKLVRNLEHLGNSVYKEDKVDISTEDSREIVELKKIINTIGEKY 359 Query: 361 IERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIV 420 ER ++L+L+SY+Q + F N A+IE+NN Y+A G+I L GLE EA++G ++ N I+ Sbjct: 360 KERIERMLNLVSYEQGTSFYINTAVIETNNKDYVAAGMICLYGLEFAEAIYGSEKYNAII 419 Query: 421 RKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKS 480 +L +I+ KY+ CDI+ + D YLLLC + + F +++N ++ F RN+ +HK+ Sbjct: 420 SELKSKISAKYSSHCDIIKISNDRYLLLCYTDCEEFISNFSVLNLPENIFCLRNIYVHKT 479 Query: 481 AICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEI 540 A+CE G++ Y KLKLA++++R++ SEF++ DD KL+E+++ +W+A NI+HA+ Sbjct: 480 ALCETFSGKDVSIYEGKLKLAMTAMRENKQSEFLYYDDIKLHELDQKVWVASNIKHAISR 539 Query: 541 GELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKT 600 GE +LVYQPIV+I++ ++GAEALCRW SAE G ISP F++IAEDIG I ELG I++ Sbjct: 540 GEFYLVYQPIVNIDSNEVVGAEALCRWNSAEYGFISPAVFVSIAEDIGLIKELGDYILEN 599 Query: 601 AMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETV 660 A+ EF FS + D+FLLHINVSPWQLN+ FH R ++K+ + A +C+EITE+ Sbjct: 600 AIREFSQFSNEYVISDEFLLHINVSPWQLNDFDFHHRVLQLIKDFNINAGQICLEITESA 659 Query: 661 IERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG 720 ++ IN+ FY NI L+ G++I++DDFG+GL++LK+ Y++ PDSIK+DS+FT +F Sbjct: 660 VKEINDSFYNNIIVLKGNGIKIALDDFGSGLADLKKLYKVKPDSIKIDSEFTSGVFDETN 719 Query: 721 KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 +IV I AR +PVIAEGVE+E A+EL KLG Q QGYLYQKP+PFS W Sbjct: 720 RIVWFISSFAREENLPVIAEGVETEHQAKELQKLGFSQVQGYLYQKPLPFSEW 772 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 649 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 111/460 (24%), Positives = 192/460 (41%), Gaps = 24/460 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---- 388 I +K G+ + I K E E L + D +G + + Sbjct: 485 IAPVKDDTGEVSHFVVALYDITATKRYESE----LEFQTNRDALTGLANRSLLRDRLSQA 540 Query: 389 -----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 N + + + L + V G + +++ + +R+ + D Sbjct: 541 ISYAHRYNHPIWIAFVDLDRFKFVNDTLGHQAGDLLLKAIAERLQHAVRDTDTVSRMGGD 600 Query: 444 LYLLLCRENVQT-FTRKI--AMVNDFDSSFGYRNLRIHKS----AICEPLQGENAWSYAE 496 ++L+ E V + I +++ S P G + Sbjct: 601 EFVLILPERVDAGLSTGIVQRIMDGIAQPLTIEGHEFFISSSIGVAVYPNDGVTPEELIK 660 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 +A+ ++ + F F + E + + ++R+AME GE L YQP +D+ T Sbjct: 661 HADIAMYRAKETGRNNFQFYTSSMNERALERLRLEGDLRNAMERGEFILHYQPQLDLRTG 720 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 I+G EAL RW E G+I P++FI +AE+ G I +G +I+ A + + + + Sbjct: 721 KIVGVEALIRWQHPELGMIPPMRFIGLAEETGLIVPIGAWVIREACRQNKVWQEHGLGS- 779 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +N+S Q + E ++E L L +E+TE+++ +H + +L+ Sbjct: 780 -LRMSVNLSARQFAQQDLLESIALALEETQLPPQCLEIELTESLVMADVDHAIGILRELK 838 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNR 734 GV++SIDDFGTG S+L D +K+D F DI IV I LA R Sbjct: 839 ALGVQLSIDDFGTGYSSLSYLKRFPIDVLKIDRSFVNDITTDPDDAAIVASIISLAHSLR 898 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 + VIAEGVE+E+ L + C Q QGY + +P+ A + Sbjct: 899 LTVIAEGVETEEQLAYLQQHDCDQIQGYFFSRPITADAME 938 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 104/469 (22%), Positives = 195/469 (41%), Gaps = 28/469 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---- 388 I ++ R+G I + N I E + E +L+ ++D +G + + Sbjct: 426 IAPVRDRDGVVTNYIGVMNDITEHRRYE----EQLVYQATHDPLTGLPNRNLLQDRLGQA 481 Query: 389 ------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + V + L + V G + +++ + R+ + Sbjct: 482 LALEAFRRRNPICVMFLDLDNFKKVNDTLGHTVGDMLLKAVANRLKNCLRGGDTVARLGG 541 Query: 443 DLYLLLC---RENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYA 495 D Y+++ RE T M+N F + I P GE + Sbjct: 542 DEYIIVLPNVREVPDVITVAKKMINVFAAPLLLMGNEIYVTASIGIALFPTDGETVDALL 601 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 + A+ ++ + + F + E + + ++ A++ E L YQP VD+ Sbjct: 602 KNADAAMYHAKEQGKNNYQFYSAEMNIRVFERLSLETSLHRAVKNQEFLLHYQPRVDLRN 661 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 I G EAL RW E G++SP KFI +AE+ G I +G +++TA + + + Sbjct: 662 GRICGVEALVRWNHPEMGLVSPAKFIPLAEETGLIVPMGEWVLRTACAQNKAWQDAGL-- 719 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 + +N+S Q + + I+ E GL L +E+TE+++ + E + +L Sbjct: 720 PPLRMAVNLSARQFRQENLIAMVEEILMETGLAPQWLELELTESLVMQEAEKSAAILREL 779 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYN 733 +G+ ++IDDFGTG S+L ++K+D F D+ +V+ I +A Sbjct: 780 TDRGIEVAIDDFGTGYSSLSYLKRFPIANLKIDQAFIRDMTRDPDDATLVKTIITMAHGL 839 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE 782 + IAEGVE + L + C + QGY + +P+ ++ G+L+ + Sbjct: 840 GMKTIAEGVELAEQIDFLCRHQCEEMQGYYFSRPITA---EELGRLLAD 885 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 646 bits (1667), Expect = 0.0, Method: Composition-based stats. Identities = 133/572 (23%), Positives = 240/572 (41%), Gaps = 52/572 (9%) Query: 230 QLAREKLIIYNSEGNYNIIDSVDTEY--IEKTSAVPNNALFEIYFYYPGGNLLNASDKLF 287 + RE +II + EG ++ TE + + N +LL ++ + Sbjct: 520 ESTREGVIITDLEGRILDVNRAFTEISGYSEPEVLGRNP-----------SLLRSNRQDH 568 Query: 288 YLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEII 347 A + + RR+ E+ + T+ + DS +G + Sbjct: 569 AFYQAMWHSLKTTGHWQGEIWNRRKSGELYPQILTINTVADS----------QGRPSHYV 618 Query: 348 SIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI---------IESNNNQYLAVGI 398 + I+++K +E +L L+ YD + + +AV Sbjct: 619 GVMTDISQLKQSEA----RLEHLVHYDPLTNLPNRRLVQSRLEHALERADRQGGRVAVLF 674 Query: 399 IKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC-----RENV 453 + L + V G + ++ L +R++E+ + + D +L+L E+ Sbjct: 675 VDLDRFKTVNDSLGHPSGDVLLELLARRLSERVREDDTLARLGGDEFLVLLENLQRPEDA 734 Query: 454 QTFTRKIAMVNDFDSSFGYRN-----LRIHKSAICEPLQGENAWSYAEKLKLAISSIRDH 508 ++++ F N + P G + +A+ ++ Sbjct: 735 AAVAE--SLLSLLQQPFHLPNGQELYVGASIGISLYPDDGHTVTDLIQHADVAMYQAKEE 792 Query: 509 MFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWV 568 + + F + E + + + A+ E L YQ +D+ ++G EAL RW Sbjct: 793 GRNTYRFYTPSLTQTARERLGLEARLHRALASEEFVLHYQAQIDMRDGRLIGCEALVRWH 852 Query: 569 SAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQ 628 SA G+++P +FI +AE+ G I LG +++ A + + + R D + +N+S Q Sbjct: 853 SATEGLVAPDRFIPLAEETGLIVPLGEWVLRQACADCQSWRARGLT--DLTVAVNLSGRQ 910 Query: 629 LNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFG 688 L P ER T +++E GL A L +E+TE++I E + L+ GVR+SIDDFG Sbjct: 911 LRSPDLVERVTRVLRETGLPAERLKLELTESMIMDQREQALERLRALKALGVRLSIDDFG 970 Query: 689 TGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESED 746 TG S+L + D +K+D F DI + +I I +AR R+ VIAEGVE+ + Sbjct: 971 TGYSSLAYLKRLPIDELKIDRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEGVETPE 1030 Query: 747 VARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 LI+ GC QGYL+ +P+P A+ + + Sbjct: 1031 QCDFLIRQGCTAGQGYLFGRPLPAEAFAQVMR 1062 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 646 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 133/611 (21%), Positives = 238/611 (38%), Gaps = 59/611 (9%) Query: 198 LNWRYL-----NEYLDQISANDEVLFLKQGH-------EIIAKNQLAREKLIIYNSEGNY 245 LN L + + +FL + + + EG Sbjct: 352 LNLDELLKAIVTRSAELSGTDHGFIFLIDNNNPSELVLRFGTGTYKQMVGIRLKPGEGMV 411 Query: 246 NIIDSVDTEYIEKT-SAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLM 304 + I K S+ P + + GG L + II Sbjct: 412 GTVWQTGEPLIVKDYSSWPGKSSIFSHIKIHGGIALPLKSEGKINGILGII--------- 462 Query: 305 TTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERS 364 + + Q E L F ++ ++ +A + + +AE K E Sbjct: 463 --YIEKNQNLESNNLSLLTGFAQLASIALD-------NANLYQAAQQELAERKRIE---- 509 Query: 365 NKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDE 415 L L +D + + N LAV + L + V G D Sbjct: 510 EILRYLAYHDSLTELPNRTLFNDRLSMALNQAHRNKNKLAVMFLDLDHFKKVNDTLGHDI 569 Query: 416 RNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR-----ENVQTFTRKIAMVNDFDSSF 470 +++++ + QR ++ + I D + +L EN KI ++ + + Sbjct: 570 GDQLLKGIAQRFSKLLRKGDTIARIGGDEFTILLHNITRAENASIVADKI--IDTLANPW 627 Query: 471 GYRNLRIHK----SAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEE 526 N H P G +A S + A+ ++ + + F + Sbjct: 628 IIGNHEFHITTSIGIALYPDDGTDAESLLKNADAAMYQAKEMGRNNYQFYTPTMNAQTLR 687 Query: 527 NIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAED 586 + N+R A++ E + YQP V+I+T I+G EAL RW +RG+ISP +FI +AE+ Sbjct: 688 RFELENNLRRALDRKEFVIYYQPQVEIHTGKIVGVEALIRWQHPQRGMISPAEFIPMAEE 747 Query: 587 IGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENG 646 G I +G I++ A + + + R + +N+S Q +PH + + ++++ G Sbjct: 748 TGLIIPIGEWILRRACAQNKAWQDRGF--SPMRVTVNLSARQFLQPHLPQYISNVLEDTG 805 Query: 647 LKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIK 706 L L +EITE++ + + +LRK G+ ++IDDFGTG S+L + D +K Sbjct: 806 LGPQWLELEITESLAMKDVAFTEKTLIELRKMGITLAIDDFGTGYSSLNYLKRLPIDILK 865 Query: 707 VDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLY 764 +D F D+ + I+ I L ++ V+AEGVE+++ L + C QGYL+ Sbjct: 866 IDRSFIHDLNTESDDVAIISAIITLGHNLKMKVVAEGVETKEQLMFLRQQQCDLMQGYLF 925 Query: 765 QKPMPFSAWDK 775 KP+P ++ Sbjct: 926 TKPLPVRELEQ 936 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 641 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 109/465 (23%), Positives = 201/465 (43%), Gaps = 24/465 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------ 385 + + G+ + I N I E K E +L ++D +G + Sbjct: 495 SVSPVLNAAGEVTNYVGIVNDITERKRYE----EQLEYQSNHDGLTGLPNRNLLGDRIGQ 550 Query: 386 ---IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + AV I L + + G D +K+++ +R++E + Sbjct: 551 ALTYAERYQRQTAVFFIDLDHFKFINDSLGHDMGDKLLQIAARRLSECVRSIDTVARHGG 610 Query: 443 DLYLLLCR-----ENVQTFTRKIAMVNDFDSSFGYRNLRIHKS--AICEPLQGENAWSYA 495 D ++++ E+ RKI G L + S P G +A Sbjct: 611 DEFVIVLSDLAVSEDAAKVARKIQDAVCRPYQIGEHELVVSCSTGISLYPKDGSDAQVLL 670 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 + +A+ + + F F + + + + + +R A+E E + YQP VD+ + Sbjct: 671 KNADVAMYRAKQCGRNNFQFYTGDLNDIVLARLTMEKYLRRALERDEFLVHYQPKVDLLS 730 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 I G EAL RW S E G ISP FI +AE+ G I +G +++TA + + + Sbjct: 731 GRITGMEALVRWQSPELGFISPASFIPLAEETGLIVAIGEWVLRTACAQNKAWQDDGL-- 788 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 ++ +N+SP Q + + I +E GL + +E+ E+++ + ++ L Sbjct: 789 PPMVVAVNLSPRQFRQEDLADTVHRIAEETGLAPRYIELEVVESLLMDDVDGAVAMLDAL 848 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYN 733 ++ GV++++DDFGTG S+L D +K+D F DI + IVR + LA Sbjct: 849 KELGVQLTMDDFGTGYSSLSYLKRFPFDMMKIDQSFVRDITRDPGSAAIVRTVISLAHTL 908 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 + V+AEG+E+E L L C + QG+ + +P+P + +++ + Sbjct: 909 NLRVVAEGIETEGQLGYLRGLACDEMQGFYFSRPVPAAEFEQMLR 953 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 641 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 100/457 (21%), Positives = 189/457 (41%), Gaps = 25/457 (5%) Query: 336 LKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI---------I 386 ++ E + ++ +AE AE ++ + YD +G + Sbjct: 165 FRLMEDLRRHAAMLEEEVAERSRAE----ERIRQMAYYDSLTGLPNRRLFNDRLRQSLAL 220 Query: 387 ESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYA-QCCDIVTFNADLY 445 + + LAV + L + + G ++++ + +R+ + + D + Sbjct: 221 AQRHKRPLAVMFLDLDRFKLINDTLGHAVGDRLLMAVAKRLRNCCRREGDTVARQGGDEF 280 Query: 446 LL---LCRENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKL 498 ++ + FT +++ F + F + P G + + + Sbjct: 281 IINLSAISDVKDAFTVAQKIIDVFRTPFVIDGYELFITTSIGISVYPHDGRSGDALVKNA 340 Query: 499 KLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAI 558 +A+ ++ + E + + ++R A+E E L YQP V++ I Sbjct: 341 DVAMYRAKEQGRNNCQLFAPEMNARAFERLSLENDMRRALERDEFVLHYQPKVNVEHGQI 400 Query: 559 LGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDF 618 EAL RW G++ P +FI +AE+ G I LG +++TA + R + Sbjct: 401 ACMEALVRWQHPSMGLVPPSRFIPLAEETGLIVPLGEWVLRTACQQNRAWQDAGY--PTM 458 Query: 619 LLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQ 678 + +N+SP QL + E ++ E GL L +E+TE+++ E +L + Sbjct: 459 QVAVNLSPRQLRQGDLSETVARVLAETGLAPGWLVIEVTESILMDDAEETIRTFRRLDRM 518 Query: 679 GVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIP 736 GVRISIDDFGTG S+L + ++K+D F +I I + +A+ + Sbjct: 519 GVRISIDDFGTGYSSLHYLKKFPVHTLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLG 578 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 V+AEGVE+ + L L C QG+L+ +P P + Sbjct: 579 VVAEGVETVEQMEVLRALNCRYMQGFLFSEPAPAEQF 615 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 639 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 107/462 (23%), Positives = 194/462 (41%), Gaps = 24/462 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------ 385 + +++ +G+ I+I N + E E E L ++D +G + Sbjct: 620 SLASIRDAQGEVSHFIAIFNDVTERVRYEAE----LEQQATHDALTGLANRNLLNDRMQR 675 Query: 386 ---IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + + +AV ++ L + + G + ++++ +R++ + + Sbjct: 676 AIIRAARDGHAVAVMLLDLDRFKLINDSLGHAAGDALLQETARRLSASVRRGDTVARLGG 735 Query: 443 DLYLLLCRE---NVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYA 495 D ++++ + ++ I P GE A + Sbjct: 736 DEFMVVMSDMSAEDAAAALAAKVLESLAEPMLLNGREIVATGSIGVSLYPRDGEAAATLL 795 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 + +A+ ++ + F F I E + + ++R A+E EL L YQP V + Sbjct: 796 KHADVAMYRAKELGRNRFQFYAPEMNERILERLELENSLRRALENDELELHYQPKVSLRD 855 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 ++GAEAL RW + G++SP FI +AE+ G I +G ++ A + R + Sbjct: 856 GRVIGAEALIRWRHPQLGMVSPADFIPLAEETGLIVPIGEWVVDHACRQLRAWLDAGL-- 913 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 + +NVS Q + + L L VE+TE+ + E + +L Sbjct: 914 PQISVAVNVSARQFQHEQLTHVLARALAAHRLPPGQLHVEVTESAVMCEPERTIFTLREL 973 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYN 733 + GVRIS+DDFGTG +L DSIK+D F D+ +A I +I LA Sbjct: 974 KNIGVRISLDDFGTGYCSLNYLKRFPIDSIKIDRCFVTDLATSAEDAAIALMIVSLAHSL 1033 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 VIAEGVE+E L + GC + QG+L+ +P+P + + + Sbjct: 1034 NQTVIAEGVENEAQLDFLRRHGCDEMQGFLFSRPLPAAEFAR 1075 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 112/457 (24%), Positives = 202/457 (44%), Gaps = 22/457 (4%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------- 385 + ++ GD I + N + AE +L+ S+D +G + Sbjct: 237 LAPVENESGDVTHFIGVLNDVTARTHAE----KRLIHQASHDALTGLPNRNLLNDRITHA 292 Query: 386 IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLY 445 I + + AV + L + V +G + ++R++ R++ + D + Sbjct: 293 IARSRGRLTAVMFLDLDRFKLVNDSYGHAVGDALIREVANRVSACLRAGDTVARLGGDEF 352 Query: 446 LLLCRE--NVQTFTR-KIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKL 498 ++L + +++ R + + S +L + P G + + Sbjct: 353 VVLLEDLASIEDAARLAAKLRDRLSESVRIGSLELPLSASIGVALAPRDGRDPEMLLKNA 412 Query: 499 KLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAI 558 +A+ ++ + + F + + + +R A+ GEL YQP VD+ T A+ Sbjct: 413 DIAMYRAKERGRNNYCFYGPEMDHHARRRLTVESELRRALAGGELEAHYQPQVDLATGAL 472 Query: 559 LGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDF 618 GAEAL RW ER ++ P +FI +AE+ G I LG Q+++ A + + + + D Sbjct: 473 TGAEALVRWRHPERCLLLPGEFIAVAEETGLIVPLGEQVLRAACRQSTRWREAG--RPDL 530 Query: 619 LLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQ 678 + +N+S Q + E+ I+ E G A L +EITE+V + + LR+Q Sbjct: 531 KVAVNLSGHQFRQHDLVEQVCDILAETGAHAAQLELEITESVAMADADGSVATLAGLRRQ 590 Query: 679 GVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIP 736 G+ ++IDDFGTG S+L D++K+D F I G IV+ I +AR R+ Sbjct: 591 GIALAIDDFGTGYSSLSYLKRFPIDTLKIDRSFIQGIPADGDDTAIVQAIIAMARSLRLS 650 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 ++AEGVE+ L+ GC QG+L+ + MP + Sbjct: 651 LLAEGVETPAQREFLVAQGCRSGQGFLFGRAMPAEDF 687 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 114/462 (24%), Positives = 198/462 (42%), Gaps = 25/462 (5%) Query: 335 ALKIREGDAKEIISIKNSIAEMKDAE---IERSNKLLSLISYDQESGFIKNMAI------ 385 L+ +EG + +I I+E K AE E+ ++L + +D + Sbjct: 289 PLRGKEGKVFGVCTIGTDISERKLAENALREQQSRLNYMAFHDALTSLPNRSLFYDRIYH 348 Query: 386 ---IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 +N +A+ ++ + + V G D + +++ + R+ E + Sbjct: 349 GLARARRSNSRVALMLLDIDRFKIVNDSLGHDAGDILLKAIAMRLTEGVRDMDTVARLGG 408 Query: 443 DLYLLLCRENVQTFTRKIAMVNDF----DSSFGYRNLRIH----KSAICEPLQGENAWSY 494 D ++++ E + I + N I P G + Sbjct: 409 DEFVVVL-EGIHDVDDVIFVANKLLATLSRPLDISGHSISATVSIGVSIFPEDGADTDEL 467 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 + +A+ ++ + F + + ++R A+E +L L YQP +D+ Sbjct: 468 LKNADIAMYKAKEAGKNNCQFYTKGMNATAVNYLLLENDLRRAIEQNQLALYYQPQIDLK 527 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 T + G EAL RW ERG++SP FI +AE+ G I +G +++ A + + + Sbjct: 528 TGDMTGVEALVRWQHPERGLVSPAHFIPLAEETGLIVPIGEWVLREACKQKKIWLDTG-- 585 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 K+ + +N+SP Q + +F + I++E GL+A L +EITE+ + Q Sbjct: 586 KNVGKVAVNLSPRQFRQKNFPGKVEAILQETGLEAKYLELEITESCAMEHAGETINQLNQ 645 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARY 732 L + G ++IDDFGTG S+L +K+D F DI A I + I LA Sbjct: 646 LNQMGTFLAIDDFGTGYSSLAYLQRFPIQKLKIDRSFIHDIHDDANDAAIAKTIIGLAHN 705 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 ++ V+AEGVE+E A L GC Q QG+LY KPM + Sbjct: 706 MQLRVVAEGVETESQAEWLRAKGCDQVQGFLYAKPMTAKQLE 747 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 636 bits (1641), Expect = e-180, Method: Composition-based stats. Identities = 114/468 (24%), Positives = 205/468 (43%), Gaps = 28/468 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE---- 387 I + +G + +++ I + K +E +L L ++D + + E Sbjct: 653 SISQVADAKGSVQNYVAVFTDITQRKLSE----ERLQFLANHDALTHLPNRALLQERIDQ 708 Query: 388 -----SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 N +AV I L + + G + ++++ +R+ E + + Sbjct: 709 ALFRAQRNKTAIAVLFIDLDRFKIINDTLGHQTGDMLLQEAAKRLKECLRETDTVARQGG 768 Query: 443 DLYLLLCRE-----NVQTFTRKIAMVNDFDSSFGYRNLRIHKSAIC----EPLQGENAWS 493 D +++L + + T RKI + F + SA P G + S Sbjct: 769 DEFVVLVEDCGDTDYLNTIARKI--MATLAQPFILVGRELFISASIGISVYPDDGLDTAS 826 Query: 494 YAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDI 553 + A+ ++ + F F E + + N+R A+E E L YQP VD+ Sbjct: 827 LLKHADAAMYRAKESGKNTFRFYAAEANTNSVELLTLENNLRRAVERNEFVLHYQPKVDL 886 Query: 554 NTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRAS 613 ++ I+GAEA+ RW E G++SP++FI +AE+ G I ++G I++ + + + Q Sbjct: 887 RSQKIIGAEAVVRWQHPELGMLSPMQFIPLAEETGLIIDIGAWIMRESCRQAVEWQQ--L 944 Query: 614 LKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIE 673 + + +N+S Q + + + E+GL + L +EITE++I E ++ Sbjct: 945 TGQNVRVAVNLSARQFRDETLRQTIADALTESGLTPDCLELEITESMIMHNAERAREVLQ 1004 Query: 674 QLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLAR 731 G + IDDFGTG S+ DS+K+D F DI I + I +A Sbjct: 1005 HFHDLGAHVLIDDFGTGYSSFGYLKHFPIDSLKIDRSFVRDIPDDVDDMAITQAIIAMAH 1064 Query: 732 YNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKL 779 +I V+AEGVE+++ L K GC Q QG+L+ +P+ + + KL Sbjct: 1065 SLQIKVVAEGVETQEQLAFLKKQGCDQIQGFLFSEPLHSHDFVRMLKL 1112 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 636 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 119/462 (25%), Positives = 202/462 (43%), Gaps = 26/462 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE----- 387 I +K EG ++ + I MK E L L S+D +G + + Sbjct: 442 IAPVKDDEGKTTHFVAAMSDITPMKQYETT----LHRLASHDVLTGLPNRALLQDRLENA 497 Query: 388 ----SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + N + V ++ L + V G + +++ + R+ + + D Sbjct: 498 IAYSARNGHAVWVVLVDLDRFKFVNDTMGHQAGDVLLKIISDRLQASVRESDTVARLGGD 557 Query: 444 LYLLLCRE-------NVQTFTRKI--AMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSY 494 ++L+ E ++I A+V L P G + + Sbjct: 558 EFVLVLPECGDGPSGYSSDVIQRIMEAVVKPLTIQGSEFFLSCSMGIAVYPNDGADPTTL 617 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 +A+ ++ + F F A ++ E + I +RHA+E+ EL L YQP VD++ Sbjct: 618 LAHADVAMYRSKELGRNNFQFYTPAMNDQALERLRIEGELRHAIELNELVLHYQPQVDLH 677 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 T AI+G EAL RW G++ P FI++AE+ G I +G +++TA + + + Sbjct: 678 TGAIVGLEALVRWNHPILGMVQPGSFISLAEETGLIIPIGAWVLQTACRQAKAWQDMGFT 737 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 + + +N+S Q + E ++E GL+A L +E+TE+ + E L + Sbjct: 738 Q--LRIAVNLSARQFTQASLLESIKDTLQETGLEARFLEIELTESSVMADIERNILTLRD 795 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD--IFGTAGKIVRIIFDLARY 732 L+ GV++S+DDFGTG S+L D++K+D F D I IV I LA Sbjct: 796 LKSLGVQLSVDDFGTGHSSLAYLKRFPIDTLKIDRSFVRDIAINQDDASIVSSIISLAHN 855 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 ++ VIAEGVE+ L GC + QGY + KP+P + Sbjct: 856 LKLNVIAEGVETASQMDILRAQGCNEIQGYYFCKPLPSDQIE 897 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 636 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 112/461 (24%), Positives = 209/461 (45%), Gaps = 23/461 (4%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--- 388 I A++ G ISI E +AE + L YD +G + + Sbjct: 460 SITAVRDEHGKVVNYISIARDTTEQTEAE----KNIHFLAYYDVLTGLPNRTLLRDRLGQ 515 Query: 389 ------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + ++ + L + + G +++++ + RI + + + Sbjct: 516 MIAVAHRDKHQFSLIFLDLDRFKYINDSMGHSVGDRLLQSVALRIQDCVREGDTVARLGG 575 Query: 443 DLYLLLCRENVQTFTRKIA--MVNDFDSSFGYRNLRIH----KSAICEPLQGENAWSYAE 496 D +++L RE ++ +A ++ + + I P Q ++A + + Sbjct: 576 DEFIVLLREAGESAASVVAQKLLIALATPYDLDGQVISTQASIGISIYPDQAQDADTLIK 635 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 +A+ ++ + F F ++ + +++R A+E GELFL YQP D+ + Sbjct: 636 NADMAMYRAKEEGRNNFQFFVPEMNFRVDLLFSMEKDLRLALERGELFLQYQPQADLASG 695 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 + G EAL RW +G +SP +FI +AE+ G I +G +++TA + + + Sbjct: 696 TLSGVEALIRWDHPVKGQVSPAEFIPVAEETGQIVAIGEWVLRTACSQMAEWRKTG--MH 753 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 D + +N+S QL +P E +++ E GL A L +EITE ++ N+ + + +++ Sbjct: 754 DLTIAVNLSIRQLRQPDLAELIKSVLLETGLDARHLELEITEGIMMGDNQAAFRFLSEMQ 813 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNR 734 GV++SIDDFGTG S+L ++ + +K+D F DI I+R I L Sbjct: 814 DLGVQLSIDDFGTGFSSLNYLKQMPVNKLKIDQSFIRDIETDEGDAAIIRSIISLGHRLN 873 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 + VIAEGVE+++ L GC + QGY Y +P+ + + Sbjct: 874 LRVIAEGVETQEQLDFLRIRGCDEIQGYFYSRPLLAEDFMR 914 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 109/453 (24%), Positives = 193/453 (42%), Gaps = 23/453 (5%) Query: 338 IREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKN---------MAIIES 388 R E ++ I+E + AE E + L YDQ +G A + Sbjct: 541 NRRSGRVEFRAVARDISERRAAEAE----IQRLAHYDQLTGLPNRSLVKDRFRYAASLTQ 596 Query: 389 NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL 448 LAV L + + G D ++++ ++ +R+ + D ++ L Sbjct: 597 RRRGQLAVMFFDLDHFKNINDTLGHDFGDRLLVEVARRLESVLRGGDTVCRLGGDEFVFL 656 Query: 449 CRENVQTFTRKIA--MVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAI 502 + ++A ++ + + P G + + + A+ Sbjct: 657 LPDTDAEGAARVAAKLLEAVAQPLVLDHQELTVTPSIGIAMYPDDGTDFDTLSRNADAAM 716 Query: 503 SSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAE 562 + + F F +A + +A +RHA++ G+ L YQP V + ++GAE Sbjct: 717 YQAKREGRNGFRFFTEAMQARSTRTLLLANALRHALDRGQFSLHYQPQVSLADGRVVGAE 776 Query: 563 ALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHI 622 AL RW E G +SP +F+ IAE G I ++G +++ A+ + R + ++ + Sbjct: 777 ALLRWTHPEFGPVSPGEFVPIAESNGLIAQIGEWVLREAVAQSRRWLDEGL--PPLVMAV 834 Query: 623 NVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRI 682 N+S Q P+ E + +++E GL + + +E+TE V + ++ L +G+R+ Sbjct: 835 NLSAAQFRNPNLPELVSQVIEEAGLPPHQVELELTEAVAMDDPQSAVRVMDALFARGIRM 894 Query: 683 SIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAE 740 SIDDFGTG S+L +K+D F DI IV I LA + +AE Sbjct: 895 SIDDFGTGYSSLGYLKRFKVGKLKIDQSFVRDIGDDPDDKAIVSAIIHLAGSLGMLTVAE 954 Query: 741 GVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 GVE+ D L + GC QGY + +P+P A+ Sbjct: 955 GVETLDQLDFLRQQGCDTVQGYYFSRPLPAEAF 987 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 109/462 (23%), Positives = 202/462 (43%), Gaps = 25/462 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--- 388 I ++ +G ++ + + N I+++KD++ +L L YD +G + Sbjct: 420 SISCVRDEQGRPRQYVFVFNDISQLKDSQ----EQLERLAHYDPLTGLPNRHLALARLEH 475 Query: 389 ------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + LAV I L + + G ++++ + QR+ ++ Q + Sbjct: 476 ALERARRHAFPLAVMFIDLDRFKTINDSLGHQAGDELLVAIAQRLHQRLRQEDTLARLGG 535 Query: 443 DLYLLLCREN--VQTFTRKIAMVNDFDSSFGYRN-----LRIHKSAICEPLQGENAWSYA 495 D +L++ E Q + A++ D FG+ + P G +A Sbjct: 536 DEFLVVIEEAPVQQVASIAHALLKVVDQPFGFSGGGEAYVGASIGISLYPGDGRSASELI 595 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 A+ + + + F ++ E + + ++R A+ E L YQP+V++ + Sbjct: 596 RNADAAMYLAKAQGSNAYRFYTESLTRAANERLSMETSLRRALRCEEFVLHYQPLVELAS 655 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 +LGAE L RW ++ P +FI +AE+ G I LG ++ A + + + Sbjct: 656 GRVLGAEVLVRWQPPGEALVPPSRFIPLAEETGLIVPLGDWVLHEACRQGKAWLDAGL-- 713 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 LL +N+SP Q + ++ +GL L +E+TE + E + L Sbjct: 714 -PLLLAVNLSPRQFLRHDLVGQVRKALQGSGLPPAQLELELTEGALMEQAEQAVKTLHAL 772 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYN 733 ++ GV ++IDDFGTG S+L D +K+D F D+ + +IV I + R Sbjct: 773 KRLGVSLAIDDFGTGYSSLAYLKRFPLDKLKIDRSFVRDLPRDSSDAEIVTTIIAMVRNL 832 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 ++ +AEGVE+ L +LGC QGYL+ P+P A+++ Sbjct: 833 KLEALAEGVETPQQLAFLRQLGCDSGQGYLFSPPLPAEAFER 874 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 634 bits (1637), Expect = e-180, Method: Composition-based stats. Identities = 103/454 (22%), Positives = 190/454 (41%), Gaps = 24/454 (5%) Query: 338 IREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--------- 388 + G A+ II + I + K AE + + L +D +G + + Sbjct: 498 NQSGQAEAIIGMGRDITDRKTAE----STIEQLAYHDPVTGLPNRTLLHDRLQLAINRAE 553 Query: 389 NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL 448 ++Q +A+ + L +A+ G ++++R + R+ + + D +++L Sbjct: 554 RDSQGVAILFLDLDRFKAINDSLGHAMGDQLLRLVGNRLLDCVRSSDTVARLGGDEFVVL 613 Query: 449 ---CRENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLA 501 + + + ++ + + + P G +A + +A Sbjct: 614 ISALDNDHAVGSVVMKILEQLCEPYQIDDHEVYTSSSIGISLFPRDGRDAEELLKNADMA 673 Query: 502 ISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGA 561 + ++ + F E + + +R A+E E FLVYQP +++ + I G Sbjct: 674 MYQAKEAGRNTCHFFSPELNMRATERLLLESTMRRALEREEFFLVYQPQMELRSGHIAGI 733 Query: 562 EALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLH 621 EAL RW + G++ P FI IAE+ G I LG ++ A + + Q + + Sbjct: 734 EALLRWRHPDLGVVPPNNFIPIAEETGLIVPLGEWVLAEACRQAVRWQQEG--QPPLRMA 791 Query: 622 INVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVR 681 +NVS Q + + R I+ E GL L +E+TE+ + E L + QL+K G+ Sbjct: 792 VNVSARQFRQRNLGLRIEKILMETGLDPALLELELTESAVMENPEEAILTLRQLKKMGIT 851 Query: 682 ISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIA 739 +SIDDFGTG S+L D +K+D F + I I LA ++ V+A Sbjct: 852 LSIDDFGTGYSSLSHLKHFPIDRLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVVA 911 Query: 740 EGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 EG+E + + + C QGY +P+ + Sbjct: 912 EGIEHSEQMEFMHQRHCDTMQGYYLSRPVTAEEF 945 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 634 bits (1635), Expect = e-180, Method: Composition-based stats. Identities = 111/451 (24%), Positives = 190/451 (42%), Gaps = 23/451 (5%) Query: 340 EGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NN 390 +G I I + K+AE + L +D +G + E Sbjct: 947 DGAPTHYIGTFIDITQHKEAEA----SIQRLAHFDALTGLPNRSLLEERVRHDLARAHRG 1002 Query: 391 NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR 450 + LA+ + L + V G + ++ ++ +R+ + D ++++ Sbjct: 1003 REALALMFVDLDRFKNVNDSLGHRVGDALLIQVAERLRRAVRDEDTVSRLGGDEFIVVLP 1062 Query: 451 ----ENVQTFTRKIAMVNDFDSSFGYRNL--RIHKSAICEPLQGENAWSYAEKLKLAISS 504 + K+ V L + P GE+ + + A+ Sbjct: 1063 STDADGAAHVAAKLLEVMAPAYRIEQHELTCSLSAGIAMYPADGESFEALSMSADTAMYR 1122 Query: 505 IRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEAL 564 + + + F N+ I ++R A+E GEL L YQP + R ++GAEAL Sbjct: 1123 AKQSGRNAYCFFTAEMQERSARNLQIENDLRRALENGELRLHYQPQFTLADRRLVGAEAL 1182 Query: 565 CRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINV 624 RW + G++SP++FI IAE+ G I +G +++ A+ + R + Q + +N+ Sbjct: 1183 LRWQHPQLGMVSPVEFIPIAEECGLILPIGEWVLRAAVSQLRVWQQEGL--PPMTVAVNL 1240 Query: 625 SPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISI 684 S Q + + + I+ GL A L +E+TE+V +++LR GVR+SI Sbjct: 1241 SAVQFRQASLTDVVSRILDAEGLAAQFLELELTESVAMDNPLAAIATMDKLRALGVRMSI 1300 Query: 685 DDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGV 742 DDFGTG S++ +K+D F D+ IV LAR + IAEGV Sbjct: 1301 DDFGTGYSSMSYLKRFRVHKLKIDRSFVADLAADPEDEAIVTATISLARDLGLQTIAEGV 1360 Query: 743 ESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 ESE L GC +AQGYL+ +P+ + + Sbjct: 1361 ESEAQLAFLRAKGCDEAQGYLFSRPLAPAQF 1391 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 631 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 115/463 (24%), Positives = 199/463 (42%), Gaps = 29/463 (6%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---- 388 I ++ GD + +I + I E K E ++ +L +D + + Sbjct: 408 INVIRDDTGDITQYAAIFSDITERKKTE----ERIKNLAYFDVLTALPNRRLFTDRLQIA 463 Query: 389 -----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + Q LA+ + L + + G ++++ + RI+ + + D Sbjct: 464 IANAHRHGQQLAIMFLDLDLFKRINDSLGHGVGDQVLVETAARISHCVREGDTVARLGGD 523 Query: 444 LYLLLCRE--NVQTFTR-KIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAE 496 + +L E +++ + ++ F + + P G + + Sbjct: 524 EFTVLLPELDHLEDVAKLAERVIAHVKQPFLVDDNELYVTTSIGIAVYPEDGTTVEALIK 583 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 A+ +D + + A E + + ++RHA+ E LVYQ VD Sbjct: 584 NADTAMYRAKDLGRNSYQLYTAAMNARSFERLTMESSLRHALTREEFRLVYQVKVDSEDG 643 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 + G EAL RW E G++SP+ FI +AE +G I+++G +++TA + +H+ Sbjct: 644 RMSGVEALVRWHHPEMGLVSPVDFIPLAEAMGVISDIGEWVLRTACRQCKHWMDLGL--P 701 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +NVS Q E E ++E GL L +E+TETV+ + + ++ LR Sbjct: 702 PVRIAVNVSAQQFVETDVPEVVARALRETGLPPQYLELELTETVLMQRVDEVVAVLKSLR 761 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI-------FGTAGKIVRIIFDL 729 GVRISIDDFGTG S+L + D++KVD F DI +IV I +L Sbjct: 762 AMGVRISIDDFGTGYSSLSYLKRMPIDALKVDRSFVNDIFDGQSKVTEDGAEIVSTIINL 821 Query: 730 ARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 A ++ IAEGVE+ + A L GC + QGYL +P+ Sbjct: 822 AHNLKLKAIAEGVETPEQAEFLRSKGCDEVQGYLISRPVSGED 864 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 631 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 126/461 (27%), Positives = 205/461 (44%), Gaps = 24/461 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE----- 387 I AL+ +++ I E K E ++ L +YD +G + + Sbjct: 476 ISALRDETSQISHYVAVFLDITERKKEE----ERINYLANYDVLTGLPNRYLLSDRIEQA 531 Query: 388 ----SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 NN +AV I L + + G D + +++ + R+ + I D Sbjct: 532 FSSAQRNNFKVAVLFIDLDYFKNINDSLGHDIGDALLKLVAARLKTCLRRSDTIARLGGD 591 Query: 444 LYLLLCRE---NVQTFTRKIAMVNDFDSSFGYRNLRIHK----SAICEPLQGENAWSYAE 496 ++ L E + + M+ F ++ P GE + Sbjct: 592 EFVALLSELDSSEEVIFVAEKMIESLTEKFTLGEYQLSITPSIGICIYPDDGETSVELLR 651 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 LA+ +D + F F + E + + +R A+ +L + YQP V + + Sbjct: 652 NADLAMYQAKDDGRNNFKFYSPDMNRKALERLKLETFLRVAIVQQQLSVYYQPKVSVLSG 711 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 + G EAL RW E G ISP FI IAE+ G INE+G +++ + + R + + D Sbjct: 712 KMTGMEALLRWQHPELGFISPAVFIPIAEETGLINEIGDWVLRQSCLQARLWQAQGY--D 769 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +N+S QL + +F R TI++E GL A+ L +EITE+++ E +EQLR Sbjct: 770 IVPIAVNLSARQLKQDNFAARVVTILREAGLDAHYLVLEITESMLMSTGESGLQILEQLR 829 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNR 734 GVR+++DDFGTG S+L R + DS+K+D F DI IV LA Sbjct: 830 DDGVRLALDDFGTGYSSLSRLKNLPLDSLKIDQSFVRDIVTDPNDASIVSATAVLAHALN 889 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 + V AEGVE+++ + L C + QGYL+ +P+P S K Sbjct: 890 LKVTAEGVETQEQLDFIRMLNCEEYQGYLFSRPIPASEVVK 930 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 631 bits (1627), Expect = e-179, Method: Composition-based stats. Identities = 105/449 (23%), Positives = 197/449 (43%), Gaps = 24/449 (5%) Query: 341 GDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNN 391 G+ + I + I+E K E E L+ + +D +G + + Sbjct: 408 GEQQVICMVLRDISERKRFEGE----LMHMAHHDALTGLPNRTLFFDRLRQGLYKKERSG 463 Query: 392 QYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE 451 + LAV + L + + G + +++++ R+ + I D + ++ E Sbjct: 464 KMLAVIYLDLDRFKIINDTLGHHTGDMLLKEVADRLRGVVRKADTISRLGGDEFTIIIDE 523 Query: 452 NV---QTFTRKIAMVNDFDSSFGYRNLRIHKSAI----CEPLQGENAWSYAEKLKLAISS 504 + +++ F + F + +A P G+ A + A+ Sbjct: 524 IATPADSLLVAEKILHVFSAPFRLEKHEMFITASMGVTLYPNDGDTAEKLLKNADTAMYH 583 Query: 505 IRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEAL 564 ++ + + F + + + E + + +RHA+ E L YQP V+ T I+G EAL Sbjct: 584 AKEEGRNTYQFFSEEMNSRVSERLSMETGLRHALARNEFLLHYQPRVNTTTGRIVGVEAL 643 Query: 565 CRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINV 624 RW ++G+I P FI +AE+ G I +G +++ + R + + + +N+ Sbjct: 644 IRWQQPQKGLILPDAFIPLAEETGLIIPIGEWVLRNTCTQARAWQEAGF--AQMRISVNI 701 Query: 625 SPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISI 684 S Q + + I++E GL+ + L +EITE+VI E + +L++ G+ I+I Sbjct: 702 SCRQFTHDNLPDTIRGILRETGLQPSCLELEITESVIMLNPERAISLLNELKEMGISIAI 761 Query: 685 DDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGV 742 DDFGTG S+L + D +K+D F I G +V I +L + ++AEGV Sbjct: 762 DDFGTGYSSLSLLKRLPADILKIDKSFVSGIPGNKSDETLVATIINLGHNMGLGLVAEGV 821 Query: 743 ESEDVARELIKLGCVQAQGYLYQKPMPFS 771 E ++ L + C + QGY + KP+P Sbjct: 822 ERQEQLHFLEERNCQEVQGYYFSKPLPAE 850 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 630 bits (1626), Expect = e-179, Method: Composition-based stats. Identities = 103/464 (22%), Positives = 191/464 (41%), Gaps = 28/464 (6%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------- 385 I A++ REG ++ I+ +K+ E ++ L YD +G + Sbjct: 395 ITAIRDREGVLTHYAALFTDISRLKETEA----RIRDLAYYDPLTGLPNRRLLDDRLQVE 450 Query: 386 --IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + LAV + L + + G +K++ ++ R+ + D Sbjct: 451 LAHAARLRCRLAVMFVDLDRFKRINDSLGHAVGDKLLVEIAARLRASLRDDDTVARMGGD 510 Query: 444 LYLLLC-----RENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSY 494 +L++ + T R+ MV + + P +A + Sbjct: 511 EFLVVLNNLSGPDEAATMARR--MVAELRRPVNVEGRELVVTTSVGVAVYPDDSRDADTL 568 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 + +A+ +D + F + A E + + + A+ EL L +QP++ Sbjct: 569 VKHADVAMYRAKDEGRNSFQLFEPAMNARSLERLALETALHRALPRDELQLYFQPVMKAE 628 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 ++ EAL RW + G++SP FI +AED G I +G ++++A R + + Sbjct: 629 GGELVAVEALLRWRHPDLGLVSPADFIPLAEDTGLIVPIGEWVLRSACEHHRRWCEAGG- 687 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 + +N+S Q E F +++ E G+ L +E+TE+++ + ++ Sbjct: 688 -APLHMMVNISARQFREEGFAAMVGSVLAETGMTPGDLTLELTESMLMDDTDRALARLDH 746 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARY 732 LR GV ++IDDFGTG S+L D +K+D F I +V I L Sbjct: 747 LRALGVCLAIDDFGTGYSSLAYLKRFPIDELKIDRLFVRGIDRNTRDAALVSAIVSLGHS 806 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKS 776 + V+AEGVE+ L + GC AQG+ + P+P+ + K+ Sbjct: 807 LGLRVVAEGVETAAHLDVLRRQGCDLAQGFHFSPPLPWEEFVKA 850 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 630 bits (1625), Expect = e-179, Method: Composition-based stats. Identities = 103/460 (22%), Positives = 187/460 (40%), Gaps = 23/460 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------ 385 +I L+ +G +SIK I E K E ++ L +D +G + Sbjct: 838 RISPLRHTDGRVTNYLSIKEDITEQKQVEA----RIRQLAHFDLLTGLPNQTLLKDRAGF 893 Query: 386 ---IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + + +LAV + + + + G ++++ L +R+ + F Sbjct: 894 AMQMAQRSAHHLAVLFLDIDHFKNINDTLGHRIGDELLVHLAKRMKLLLRDEDTLSRFGG 953 Query: 443 DLYLLLCRENVQTFTRKIA--MVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAE 496 D ++L+ + +A ++ + + P G + + Sbjct: 954 DEFILVLPDTDADGAAHVAEKILETVAKTCYIEQHELVVTPSIGIAMYPSDGMDFDKLYQ 1013 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 +A+ + + F F + + +R A+ + L YQP + + Sbjct: 1014 SADVAMYRAKQDGRNNFRFFTSEMQARSARRLLLENALRQALSRNQFELHYQPQISMQDG 1073 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 I+GAEAL RW E G ISP +FI +AE+ G I +G +++TA+ + + + Sbjct: 1074 KIVGAEALLRWYHPELGSISPAEFIPVAEESGLILSIGEWVLRTAVQQVKRWQDAG--HP 1131 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + IN+S Q + E I+ E L + + +E+TE+V + L Sbjct: 1132 PVTVAINLSAVQFRQARLSELVMQILHEANLAPHWIELELTESVAMDNPLVAIGVMNDLH 1191 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNR 734 G+R+SIDDFGTG S+L + + +K+D F D+ + IV I LA Sbjct: 1192 GCGIRMSIDDFGTGYSSLSYLRKFKVNKLKIDQSFVRDLADDIESRAIVTAIITLASSMG 1251 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 IAEGVE+ L GC + QGY + +P+ + ++ Sbjct: 1252 FQTIAEGVETAGQLAFLRLQGCNEVQGYYFSRPLTVALFE 1291 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 629 bits (1624), Expect = e-178, Method: Composition-based stats. Identities = 107/460 (23%), Positives = 202/460 (43%), Gaps = 23/460 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------ 385 ++ ++ +G ++I+ I K+A+ ++ SL +D +G + Sbjct: 397 RVSPVREADGRITHYLAIEEDITNQKNAQA----RIESLAHFDVLTGLPNRALLDERAQR 452 Query: 386 ---IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + + LAV + L + + G + + ++ +L QR+ + + Sbjct: 453 ALRLAEEDQATLAVMFLDLDHFKNINDTLGHNLGDTLLVELAQRLRAVLRRDDTLSRLGG 512 Query: 443 DLYLLLCRENVQTFTRKIA--MVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAE 496 D ++LL + +KIA ++ + + + + P G + + + Sbjct: 513 DEFVLLLPGANRESAKKIAQELMRAINEPYRIGSHELNVMASIGIAVYPADGMDFETLCK 572 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 +A+ + + + + + +R A+ +L + YQP + + + Sbjct: 573 NADVAMYRAKQEGRNAYRSFTQEMQAYSTRYLQVLNALRQAIAQEQLHVHYQPQISLISG 632 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 ++GAEAL RW E G ISP +FI IAE+ G I ++G +++ A+ + + + Q D Sbjct: 633 DVIGAEALLRWHHPELGNISPAEFIPIAEESGLILQIGEWVLRVAVAQAKKWHQLGL--D 690 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 ++ +N+S Q I+KE L +E+TE V + + L Sbjct: 691 KLIIAVNLSAVQFRHAGLPNLVMQILKEEDFPPQYLELELTEGVAMHDPQGAIAMMNSLH 750 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNR 734 ++GVR+SIDDFGTG S+L + +K+D F DI A IV I +A+ Sbjct: 751 ERGVRMSIDDFGTGYSSLSYLKQFKAYKLKIDQSFVRDISTDAEDKAIVSAIIGMAKNLG 810 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 + IAEGVE+ + L + GC +AQGY Y KP+P + ++ Sbjct: 811 LQTIAEGVETAEQQAFLREEGCHEAQGYHYSKPLPAADFE 850 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 106/451 (23%), Positives = 197/451 (43%), Gaps = 22/451 (4%) Query: 339 REGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------N 389 G+ E++ I E K AE + + YD + E Sbjct: 357 ENGEIVEMVGSMIDITERKKAE----ETIRYMAHYDSLTNLPNRTLFHEKLAEAMLKAKQ 412 Query: 390 NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC 449 ++ + V I L + + G + +++ + R+ + + D + + Sbjct: 413 KDEKIGVMFIDLDRFKNINDTLGHSIGDVLLQAVANRLICCLRKEDSVSRLGGDEFAIFL 472 Query: 450 RENVQTFTRKIA--MVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAIS 503 +IA ++ S ++ I P G++ + + A+ Sbjct: 473 TGVTHREAGEIAQRIITSMSESITLDHIEIFITPSIGISMYPDDGDDIEALLKHADAAMY 532 Query: 504 SIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEA 563 ++ + + F + + + + + R +R A++ + L YQP + + T I+G EA Sbjct: 533 LAKEQGKNNYQFFSEELHQVLAKKLQLERELRKALDEKQFTLHYQPKIHLQTGQIIGMEA 592 Query: 564 LCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHIN 623 L RW + G+I P++FI IAE+ G I LG +++TA + + + + + + +N Sbjct: 593 LIRWDHPDLGLIPPIQFIPIAEETGLIVPLGEWVMRTACQQTKAWQEAGFTQ--LAVAVN 650 Query: 624 VSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRIS 683 +S Q + + E T+I++E GL L +EITE++ ++ + +L+ GV IS Sbjct: 651 ISLRQFMQNNLIEMITSILEETGLAPQYLELEITESMAL-NVDYTIRILNRLKALGVSIS 709 Query: 684 IDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIAEGVE 743 IDDFGTG S+L + D +K+D F ++ I++ I +A +I VIAEGVE Sbjct: 710 IDDFGTGYSSLSYLSQFPIDRLKIDQSFLRNLNPQNQAIIKTIIHMAHNMKIAVIAEGVE 769 Query: 744 SEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 + + L + C + QGY Y KP+P D Sbjct: 770 THEHVDFLKEQLCNEVQGYFYSKPLPTKEID 800 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 627 bits (1619), Expect = e-178, Method: Composition-based stats. Identities = 110/482 (22%), Positives = 199/482 (41%), Gaps = 29/482 (6%) Query: 314 SEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISY 373 E+ + T P I A++ EGD + + I+E K +E ++ L Y Sbjct: 926 GEILQKRKTGELYPSWVG-ITAVRDEEGDLVSFVCFFSDISERKASE----RRIHRLAYY 980 Query: 374 DQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLC 424 D + + N Q++ + + L + + G +++++++ Sbjct: 981 DALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFLDLDRFKPINDSLGHAAGDRMLQEVA 1040 Query: 425 QRIAEKYAQCCDIVTFNADLYLLLCR---ENVQTFTRKIAMVN----DFDSSFGYRNLRI 477 R++ +Q + D + LL + R I + F Sbjct: 1041 TRLSACVSQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVAELILGRLARPFTLEGREF 1100 Query: 478 ----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARN 533 P G + A+ ++ + F F E + + + Sbjct: 1101 FVTASIGVALSPQDGAELSLLMKNADTAMYHAKEMGKNNFQFYQAEMNARALERLELESD 1160 Query: 534 IRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINEL 593 +R A+E+GE L YQP + R + GAEAL RW RG++ P +FI + E+IG + ++ Sbjct: 1161 LRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPPSEFIPVLEEIGLVAQV 1220 Query: 594 GYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLC 653 G ++ A + R + + + +N+S Q + ER I+ E G+ L Sbjct: 1221 GDWLLAEACKQLRSWHKAKVRVP--KVSVNLSARQFADGQLGERIAAILYETGIPPACLE 1278 Query: 654 VEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTG 713 +E+TE+++ + L++ G+ I++DDFGTG S+L + D +K+D F Sbjct: 1279 LELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNYLKQFPIDVLKIDRSFVD 1338 Query: 714 DIFG--TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFS 771 + +I R I +A + VIAEGVES+ L + GC + QGYL+ +PMP Sbjct: 1339 GLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAE 1398 Query: 772 AW 773 + Sbjct: 1399 QF 1400 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 627 bits (1619), Expect = e-178, Method: Composition-based stats. Identities = 109/470 (23%), Positives = 201/470 (42%), Gaps = 34/470 (7%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------- 385 + ++ G + + + I+ MK+ E +L L YD + + + Sbjct: 357 LSVVRDHNGKVSHYVGVFSDISRMKETEA----RLQRLAHYDALTDLPNRVLLNLRLAHG 412 Query: 386 --IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + + LAV + + + V G ++++ ++ +R+ + + D Sbjct: 413 VERVQRSGEMLAVLFLDIDRFKNVNDSLGHPVGDELLIEIARRLRSRIRAEDTLARLGGD 472 Query: 444 LYLLLCR-----ENVQTFTRKIAMVNDFDSSFGYRN-----LRIHKSAICEPLQGENAWS 493 +++L +V F ++I ++ + SF + + PL ++A Sbjct: 473 EFVILLDRIRSANDVADFAQEI--IDLLNQSFQLASGQEVFVGASIGISLYPLDTDDATQ 530 Query: 494 YAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDI 553 A+ ++ + + F E + + +R +E GE L +QP+V + Sbjct: 531 LISNADAALYQAKEAGRNVYRFYTADLTRAAHERLGLEAALRRGLERGEFVLHFQPVVAL 590 Query: 554 NTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRAS 613 + ++GAEAL RW G+I+PL+FI +AE+ G I LG ++++A + R + Sbjct: 591 DKGEVVGAEALVRWNHPTEGMIAPLRFIPLAEETGLIVPLGEWVLESACRQGREWLD--- 647 Query: 614 LKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIE 673 + +N+S Q I+ G A L +EITE+ + + + Sbjct: 648 CGRPLTIAVNLSTRQFRAGDLTATVRDILDRTGFPAALLELEITESTVMEDADRAVATLA 707 Query: 674 QLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLAR 731 L+ GVR+SIDDFGTG S+L D++K+D F DI IV + +A Sbjct: 708 ALKGLGVRLSIDDFGTGYSSLAYLKRFAVDALKIDRSFVRDIADDENDRMIVATVVAMAH 767 Query: 732 YNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW----DKSG 777 R+ VIAEGVE+ + L LGC QGYL +P + + +++G Sbjct: 768 QMRLGVIAEGVETAEQLAFLRSLGCEAYQGYLVGRPQAAADFLGAVERAG 817 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 627 bits (1619), Expect = e-178, Method: Composition-based stats. Identities = 103/458 (22%), Positives = 188/458 (41%), Gaps = 29/458 (6%) Query: 337 KIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI---------IE 387 + ++G + I + ++AE + L YD +G A + Sbjct: 633 EWQDGVLERIRGTVQDVTSAREAEAH----IQYLAHYDSLTGLPNRSAWMNQARSALSLA 688 Query: 388 SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLL 447 + LAV + L + V G ++++ + QR+A + D ++ Sbjct: 689 QRHQHILAVLFLDLDNFKTVNDSLGHPVGDRLLAAVAQRLAHCLREEDSFARLGGDEFVA 748 Query: 448 LCR-----ENVQTFTRKIAMVNDFDSSFGYRNLR----IHKSAICEPLQGENAWSYAEKL 498 L E+ RK M++ + + + P G + + + Sbjct: 749 LLPRVTRAEDAAAVARK--MLDALATPVVIDDHELAPSVSIGISLFPSDGTDVDTLLKHA 806 Query: 499 KLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAI 558 A+ ++ + F F E + + +R A+E EL L YQP V + Sbjct: 807 DTAMYGAKEVGRNNFQFFVPEMNTRALERLLLENALRRAIERNELTLHYQPQVAATSDRP 866 Query: 559 LGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDF 618 G EAL RW + G++ P +FI IAED G I LG +++ A + +++ Sbjct: 867 NGCEALVRWQHPDFGLVPPAQFIPIAEDSGLIVPLGEWVLREACRQQVKWARSGL---HL 923 Query: 619 LLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQ 678 ++ +N+S Q F + ++ E G + +EITE+ + ++ + +L Sbjct: 924 MVGVNISALQFRRADFVDSVVQVLAETGANPERIELEITESALMDASDALSRRLRELANM 983 Query: 679 GVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIP 736 G+ +++DDFGTG S+L + +K+D F D+ G + LAR + Sbjct: 984 GLSLALDDFGTGYSSLAYLKRLPIGRLKIDRSFVKDLPGDPEDAAVTAATLSLARDLGLE 1043 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 V+AEGVE+ L+ GC QGYLY +P+ +A++ Sbjct: 1044 VVAEGVETVAQRDFLVARGCHTLQGYLYSRPLDVAAFE 1081 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 627 bits (1618), Expect = e-178, Method: Composition-based stats. Identities = 111/463 (23%), Positives = 198/463 (42%), Gaps = 29/463 (6%) Query: 333 IEALKIREG-DAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--- 388 I ++ E + I+I + I K AE + + L +D +G ++ Sbjct: 349 INGVRDPETREITHFIAIFSDITARKRAEAD----IQHLAYHDTLTGLANRFSLTARLQL 404 Query: 389 ------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 N Q LAV + L + + G +++++++ +R+ + + + Sbjct: 405 SVAEARRNGQRLAVMFLDLDRFKHINDSLGHPVGDELLKQVARRLRDAVRETDTVARLGG 464 Query: 443 DLYLLLCR-----ENVQTFTRKIAMVNDFDSSFGYRNLRIH----KSAICEPLQGENAWS 493 D ++++ + +V K ++ + + +H P + + Sbjct: 465 DEFVVVLQGIGGAHDVTHVAAK--LLAQLSAPYCVDTTELHTTASIGISLFPDDSADPAA 522 Query: 494 YAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDI 553 A+ + ++F F D + + R +R A+ GE L YQP D Sbjct: 523 LMRNADTAMYHAKAAGRAKFQFYTDEMNRAATARLDLERKLRGAVARGEFELWYQPQFDS 582 Query: 554 NTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRAS 613 + G EAL RW + G+I+PL+FI +AE+ G I E+G +++ A + R + Sbjct: 583 RHGHLTGLEALVRWRHPQDGLIAPLRFIPLAEETGVIVEIGTWVLREACRQARQWLDAGL 642 Query: 614 LKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIE 673 + + +N+S QL E + T + +GL+ L +EITE+ + + ++ Sbjct: 643 --PELRISVNLSVRQLREKCLVDTVWTTLAASGLRPGLLELEITESAVMDNPDEAVALLQ 700 Query: 674 QLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLAR 731 L+ GVRI+IDDFGTG S+L D +K+D F DI A IV LA Sbjct: 701 ALKNLGVRIAIDDFGTGHSSLSYLKLFPLDHLKIDRSFISDIEHDANDTMIVAAAVSLAH 760 Query: 732 YNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 + VIAEGVES L +LGC + QG+ + +P+ + Sbjct: 761 NLGLSVIAEGVESAVQVARLRELGCDELQGFHFSRPVTADVVE 803 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 626 bits (1616), Expect = e-178, Method: Composition-based stats. Identities = 115/459 (25%), Positives = 204/459 (44%), Gaps = 24/459 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--- 388 + A+ G+ IS+ N + + K E L ++D +G + + Sbjct: 429 ALAAVHNEHGEIAHFISVFNDVTDRKRYEAA----LEYQANHDDLTGLPNRNLLRDRLEH 484 Query: 389 ------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + LAV ++ L + V G + +++++ R+++ + Sbjct: 485 AITKATREHTKLAVLLLDLDQFKRVNDGLGHKIGDTLIQRVASRMSQCVRDSDTVARLGG 544 Query: 443 DLYLLL---CRENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYA 495 D +++L R+ T ++ F I P G+N Sbjct: 545 DEFMILSTDIRDERAAATLAQKLLRQFRQKVAINGHEIIASASIGIAMFPKDGDNGDELF 604 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 A+ +D + F F N + E +++ +++R+A+ + +L L YQP +D+ + Sbjct: 605 RNADTAMYRAKDVGRNGFQFYSAEMNNRMRERLYLEQSLRNAIGLHQLSLWYQPKLDLAS 664 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 ++ AEAL RW + G+ISP FI IAE+ G I +G +I+ A + + + Sbjct: 665 GSVKSAEALIRWRHPQLGMISPGDFIPIAEETGLILPIGAWVIEEASRQLAKWRDQE--N 722 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 D + IN+S +QL+ ++ + GL SL +E+TET I + ++ L Sbjct: 723 QDIRVAINISAYQLSHGKLTDQVIQALDSLGLDPQSLTIEVTETAIMPQMDKAVCELQSL 782 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYN 733 R+ G+R+++DDFGTG S+L D +K+D F DI +G IV+ I +LA Sbjct: 783 REMGIRVALDDFGTGYSSLTYLKRFPIDILKIDRSFVSDIADDEESGAIVKTIINLAHNL 842 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 + V+AEGVE+E L GC + QGY + KP+P Sbjct: 843 NMTVVAEGVETEAQLEFLRTNGCDEVQGYYFCKPLPSEE 881 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 121/485 (24%), Positives = 214/485 (44%), Gaps = 29/485 (5%) Query: 309 FRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLL 368 + E+ + + P I + G + + + I++ K AE +L Sbjct: 563 HGKWMGELLAQKRSGEYYPAWV-SISTVHDNHGSLQNYVVVLTDISQRKQAE----ERLQ 617 Query: 369 SLISYDQESGFIKNMAIIE---------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKI 419 L ++D +G + E Q + V I L + + G + + Sbjct: 618 FLATHDGLTGLPNRTLLQERMELAVLRAQRYQQCVGVLFIDLDRFKIINDTLGHQAGDVL 677 Query: 420 VRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQ-----TFTRKIAMVNDFDSSFGYRN 474 ++++ R+ E Q I D +++L + ++ RKI ++ F Sbjct: 678 LQEVAGRLGECLRQTDTIARQGGDEFVVLVEDFIEQQYLVNVARKI--MHALAQPFILMQ 735 Query: 475 LRIHKSAIC----EPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWI 530 ++ SA P G + S + +A+ +D + F F + + Sbjct: 736 QELYISASIGISVYPDDGVDISSLLKNADMAMYRAKDDGKNTFHFYSADGNANSVSRLTL 795 Query: 531 ARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFI 590 ++R A+E E L+YQ +D+ + I+GAEAL RW SAE G++SP FI +AE+ G I Sbjct: 796 ENSLRRALERNEFSLLYQAKLDLAEQNIIGAEALIRWHSAELGMVSPQDFIPVAEETGMI 855 Query: 591 NELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKAN 650 E+G +++ A + H+ + A + +N+S Q E ++ + ++E+GL N Sbjct: 856 IEIGEWVLQQACRDACHWQEVAG--RPIRVGVNISARQFREDSLYQAISNALEESGLTPN 913 Query: 651 SLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQ 710 L +EITE++I + E ++ R G + IDDFGTG S+L DS+K+D Sbjct: 914 CLELEITESMIMQNAERASQMLQHFRNLGSYVLIDDFGTGYSSLGYLKHFPIDSLKIDRS 973 Query: 711 FTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 F DI + I + I +A +I V+AEGVE++ L GC Q QGY++ +P+ Sbjct: 974 FVRDIPQDSDDMAITQAIIAMAHSLKINVVAEGVETQAQLEFLRGQGCDQLQGYIFSRPL 1033 Query: 769 PFSAW 773 + Sbjct: 1034 VVEDF 1038 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 626 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 118/460 (25%), Positives = 204/460 (44%), Gaps = 23/460 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------- 385 I +K +G ++IK I E K AE N L +DQ +G + Sbjct: 487 ITPVKQADGKITNYVAIKEDITEKKKAEAYTEN----LAYFDQLTGLPNRRMLQAQVKYR 542 Query: 386 --IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + +N+Q L V + L + + G ++++ K+ +RI + + + D Sbjct: 543 LNMAQSNHQPLTVMFLDLDNFKNINDSLGHTVGDQVLIKIAKRIKKAIREVDTVSRLGGD 602 Query: 444 LYLLLCRENVQTFTRKIA--MVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEK 497 +++L IA ++ + + + + P G + + + Sbjct: 603 EFIMLFPNTDANAAMHIATTLIQEISKASVVEHNELTITPSIGIAIYPNDGNDFKTLLKN 662 Query: 498 LKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 + A+ +++ + F F N+ + +RHA++ EL L YQP + + Sbjct: 663 AETAMYRVKNDSRNGFHFVTPEMQLSASRNLQLENALRHALKRNELQLYYQPQISTSNGQ 722 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 I+GAEAL RW E G+ISP +FI IAE G I E+G +++TA+ + +++ Sbjct: 723 IIGAEALLRWHHPELGMISPAEFIPIAESSGQIIEIGEWVLRTAIRQTKNWMDDGFT--P 780 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK 677 ++ +N+S Q + + T I+ E L L +E+TE V E + + Sbjct: 781 MIIAVNLSVVQFRQKNLLTLITDILAEVQLPNEYLELELTEAVTMHDPESVINVMNTFHE 840 Query: 678 QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRI 735 QG+R+SIDDFGTG S+L + +K+D F DI IV I D+A + Sbjct: 841 QGIRMSIDDFGTGYSSLSYLKKFKVYKLKIDQSFIRDISNDPDDRAIVSAIIDMASNLGL 900 Query: 736 PVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 IAEGVE+ + L GC + QGY + KP+P +++ Sbjct: 901 QTIAEGVETAEQLAFLRLHGCHEVQGYYFSKPLPSVEFEQ 940 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 624 bits (1610), Expect = e-177, Method: Composition-based stats. Identities = 107/458 (23%), Positives = 195/458 (42%), Gaps = 23/458 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE----- 387 I + +G ++IK I E + E ++ L +D +G + E Sbjct: 689 ISPVSQVDGRVMNYLAIKEDITEKRLTE----ERIEKLEHFDHLTGLPNRTQLNERFKYA 744 Query: 388 ----SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + + + V + L + + G ++++ + +R+ E + D Sbjct: 745 LSLAQRSGEQMTVMFLDLDHFKDINDTLGHSIGDQLLMDVAKRLKETLRDEDTVSRQGGD 804 Query: 444 LYLLLCRENVQTFTRKIA--MVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEK 497 ++L+ + +A ++ +F + + P GEN + ++ Sbjct: 805 EFILILPGTDENGAAHVAAKLMEAVSQAFQFEQHELVATCSIGIAIYPHDGENFETLSKN 864 Query: 498 LKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 A+ ++ + F F + + +RHA+ G+L L YQP + Sbjct: 865 ADTAMYRVKHDGRNGFCFFTSEMQAHSARTLQLGNALRHALTRGQLHLHYQPQISTQDGH 924 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 ++GAEAL RW E G ISP +FI IAED G I +G +++TA+ + + + Sbjct: 925 VVGAEALLRWQHPELGSISPAEFIPIAEDNGQIIPIGEWVLRTAIKQLKDWMDSGL--PP 982 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK 677 ++ +N+S Q + + E T+I+ E+ + L +E+TE V + +++L Sbjct: 983 MIMAVNLSAAQFRQSNLMELVTSILDESKVPHRYLELELTEAVAMDDPQLAIGVMDKLHT 1042 Query: 678 QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRI 735 G+++SIDDFGTG S+L +K+D F DI IV I ++A + Sbjct: 1043 GGIKMSIDDFGTGYSSLSYLKRFKVYKLKIDQSFVHDITDDPDDKAIVAAIINMASSLGM 1102 Query: 736 PVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 IAEGVE+ L GC + QGY + KP+P + Sbjct: 1103 QTIAEGVETAGQLSFLRLQGCNEVQGYYFSKPLPAEQF 1140 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 624 bits (1609), Expect = e-177, Method: Composition-based stats. Identities = 102/459 (22%), Positives = 201/459 (43%), Gaps = 31/459 (6%) Query: 347 ISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVG 397 ++I I + K AE +++ L YD +G + + +N+ +A+ Sbjct: 462 LAIVRDITDRKKAE----DEIQQLAYYDTLTGLPNRSLLQDRLGQGIVQAVRDNRKVAIM 517 Query: 398 IIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR-----EN 452 + L +++ G + ++ + +R+ E + + D ++++ E+ Sbjct: 518 FLDLDRFKSINDTLGHVAGDSLLATVAERLTECVRETDTVARIGGDEFVIIISAIEHAED 577 Query: 453 VQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDH 508 + KI + + I P G + + LA+ +D Sbjct: 578 LNKIAEKI--LAAISKPLVLNDQEIFITASIGIAIYPEDGTDVQGLLKNADLAMYKAKDQ 635 Query: 509 MFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWV 568 + F + + E++ + ++R A+E E + YQP +D+ + ++G EAL RW Sbjct: 636 GKNAFQYFSREMNVQALEHLILENSLRRALERNEFVIFYQPQMDLKSGRLVGMEALIRWQ 695 Query: 569 SAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQ 628 + G++ P +FI +AE+ G I +G ++TA + R + + + +N+ Q Sbjct: 696 HPDLGLLPPSRFIPMAEETGLILPIGEWALQTACAKNRAWMDAGFM--PLRVAVNLCGIQ 753 Query: 629 LNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFG 688 + F E ++K+ GL + L +E+TE+++ E + +L++ GV ++IDDFG Sbjct: 754 FRQKKFIELIEAVLKKTGLAPSQLELELTESMLMSKAEESTTVLHKLKEMGVSLAIDDFG 813 Query: 689 TGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESED 746 TG S+L + +K+D F D+ IV I +A + V AEGVE+ Sbjct: 814 TGYSSLSYLKNFPINRVKIDRSFIRDVPNNPDDTAIVSAIIAMAHNLNLKVTAEGVENHS 873 Query: 747 VARELIKLGCVQAQGYLYQKPMP---FSAWDKSGKLVKE 782 L C + QGYL P+P F+ + + G +++E Sbjct: 874 QLEFLSTRNCNEIQGYLLSSPLPEAEFTRFLRGGMMIQE 912 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 623 bits (1608), Expect = e-177, Method: Composition-based stats. Identities = 111/459 (24%), Positives = 192/459 (41%), Gaps = 24/459 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE---- 387 I A++ G + + I K AE +L L ++D + +I Sbjct: 612 SISAVRDDAGAITNYVGVFADITVRKQAE----ERLQFLANHDPLTRLPNRSWLIACLED 667 Query: 388 -----SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 +++ Q +AV + L + + FG ++++R+ R+ + I Sbjct: 668 RIQQIASSGQQVAVMFLDLDRFKLINDSFGHQTGDELLRETASRLEQVVGGRGQIARLGG 727 Query: 443 DLYLLLCRENVQTFTR---KIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYA 495 D + LL T ++ + P G +A + Sbjct: 728 DEFTLLVSHFASQATLSTLAEDILAVLAQPLWLEGQELIVTGSLGISVYPHDGSDARTLL 787 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 + +A+ ++ + + F + E + + R +R A+E GE L +QPIV T Sbjct: 788 KNADVAMYRAKEAGKNTYQFFAAEMNAQAIERLQLERGLRQALERGEFELHFQPIVAAAT 847 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 + E L RW E G++SP++FI +AE+ G I +G +I+ A + + Sbjct: 848 YRLEALEVLLRWRHPELGLVSPVRFIPLAEETGLIRPIGDWVIRQACRQLAEWDCLGLHV 907 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 L IN+S Q + + + E G+ A L +E+TE+++ + + +L Sbjct: 908 P--RLAINLSARQFEQQGLIMQVAGALAEAGIAAGRLELEMTESMVMQNPSEAVSLLGEL 965 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYN 733 + GVR+SIDDFGTG S+L D++K+D F + G I I +AR Sbjct: 966 KALGVRLSIDDFGTGYSSLSYLKRFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAMARKL 1025 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 V+AEGVE+E A L GC QGYL+ +P+P + Sbjct: 1026 SFSVVAEGVETEAQAAFLCAKGCQLLQGYLFSRPLPAAE 1064 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 623 bits (1608), Expect = e-177, Method: Composition-based stats. Identities = 117/474 (24%), Positives = 210/474 (44%), Gaps = 36/474 (7%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---- 388 I A+K + G ++ I + K E ++L L YD + +++ Sbjct: 443 ISAVKGQGGLVTHYVATHIDITQRKAVE----DQLHKLAFYDPLTQLPNRRLLLDRLGHV 498 Query: 389 -----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + A+ I L +A+ G D ++++ ++ QR+ QC + D Sbjct: 499 LAGSTRSRNQGAIMFIDLDNFKALNDTQGHDVGDRLLAEVAQRLKSSVRQCDTVARLGGD 558 Query: 444 LYLLLCRE---------NVQTFTRKIAMVND------FDSSFGYRNL-----RIHKSAIC 483 ++++ ++ V+ KI D FD+ G RN Sbjct: 559 EFVVMVQDLAADSMVVAQVEAVAGKILAALDCPYRLVFDAELGRRNALNYHCTASIGITL 618 Query: 484 EPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGEL 543 N ++ LA+ +D + F D I + + ++R A+E G+ Sbjct: 619 FGAHSTNVDELLKQADLAMYQAKDSGRNAIRFFDPEMQAAITSRVALEADLREAVEAGQF 678 Query: 544 FLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMG 603 L YQP V + + GAEAL RW + RG++ P +FI +AE+ G I LG +++TA Sbjct: 679 QLYYQPQVVGESHRLTGAEALLRWHHSRRGMVPPSEFIPLAEETGLILPLGQWVLETACA 738 Query: 604 EFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIER 663 + ++ + + +NVS Q+ + F ++ ++ + G L +E+TE+++ Sbjct: 739 QLATWASQ-PEMAQLTVAVNVSAHQIRQTDFVDQVLAVLADAGANPQRLKLELTESLLVS 797 Query: 664 INEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--K 721 E + L+ +GV S+DDFGTG S+L + D +K+D F ++ A Sbjct: 798 NVEDIIAKMTLLKSRGVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQSFVNEVLTDANDAA 857 Query: 722 IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 I ++I LA + VIAEGVE+E+ L + GC QGYL+ KP+P + +++ Sbjct: 858 IAKMIVALAESLGLAVIAEGVETEEQRNFLAESGCHAYQGYLFSKPLPLAGFEQ 911 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 107/463 (23%), Positives = 198/463 (42%), Gaps = 34/463 (7%) Query: 338 IREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------------ 385 + I I E K E ++ L +D +G + + Sbjct: 411 DNHDKLQGSIITLQDITERKKTE----EEIKFLAYHDVLTGLLNRKSFYTRLEDELIRSY 466 Query: 386 -----IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTF 440 A+ + + + V G D +++++ + R+ + I Sbjct: 467 SYDGDRRRIKGHKWALFFLDVDRFKYVNDTLGHDVGDELLKVVAVRLKNCLRKSDYIFRL 526 Query: 441 NADLYLLLCRE-----NVQTFTRKIAMVNDFDSSFGYRNLRI--HKSAICEPLQGENAWS 493 D + ++ + ++ +KI L I P G++ + Sbjct: 527 GGDEFTIILNDLTDDTDMAKVAQKIRKAIARPCRIKDHELYITVSIGISIYPDDGDDVET 586 Query: 494 YAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDI 553 + +A+ + ++ + F + + E + + N+R+A++ +L + YQP+VD Sbjct: 587 LVKNADIAMYAAKEENQG-YRFFIEEMNRKTLERMMLENNLRNALQHDQLIIYYQPLVD- 644 Query: 554 NTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRAS 613 +T I+G EAL RW E G+ISP +FI +AE+ G I +G +++ A + R + + Sbjct: 645 STNQIVGMEALLRWHHPELGLISPSQFIPLAEETGLIVPIGKWVLRCACQQARKWHEMGY 704 Query: 614 LKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIE 673 + F + +N+S Q EP E I++ L + L +E+TE+ I E ++ Sbjct: 705 TR--FYVAVNLSVRQFREPDLVETIEQILEATDLPPDCLKLEVTESGIMEHPEQAIAKMK 762 Query: 674 QLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLAR 731 LR +G+ SIDDFGTG S+L D++K+D F D +I++ I +AR Sbjct: 763 MLRAKGIHFSIDDFGTGYSSLSYLKRFPIDTLKIDRSFVIDSTTNKDDQEIIKTIIAMAR 822 Query: 732 YNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 + +AEGVE+++ LI GC QGY + +PMP ++ Sbjct: 823 NLGMDTVAEGVEAKEQQDFLIHHGCHMMQGYYFGRPMPAEKFE 865 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 106/461 (22%), Positives = 210/461 (45%), Gaps = 24/461 (5%) Query: 331 DQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI----- 385 D ++ ++G+ ++ + + ++E ++ +NK+ L +D +G + + Sbjct: 286 DSAAPIRDQDGNVLGVVLVFHDVSEARN----MANKMTYLAEHDYLTGLPNRLLLNDRLN 341 Query: 386 ----IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFN 441 I + +++A+ + L + + G + +++++ + +R+ I Sbjct: 342 QALTIARRDQEFIALMFLDLDHFKNINDSLGHEVGDQLLKMVARRLESCLRASDTISRQG 401 Query: 442 ADLYLLLCRE-----NVQTFTRKIAMVNDFDSSFGYRNLRIH--KSAICEPLQGENAWSY 494 D +++L E + K+ G + + P GEN Sbjct: 402 GDEFMILLPELTNYFSPAEVAEKLLAAATVPYEIGSHEITVSASIGIAVFPDDGENGELL 461 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 + A+ + + + F A + E + +R A+E E L YQP +DI Sbjct: 462 TKNADAAMYHAKSLGRNNYQFFTRAMNERVMEIAELESKLRRAVERNEFVLYYQPKIDIR 521 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 T ++GAEAL RW G+++P +FI IAED G I +G +++ A + + + Sbjct: 522 TGQVVGAEALIRWQHPSWGLVAPDRFIPIAEDSGLIRPIGLWVMREACRQNQEWQAAGLA 581 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 + + +N+S QL + +F + + I+ +GL+ + L +E+TE+V + + Sbjct: 582 R--IPVAVNLSTVQLRQHNFLQEVSEILLMSGLEPDYLELEVTESVAIHAETEVINWLHK 639 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARY 732 LR GV++++DDFGTG S+L + +++K+D F DI I+ I ++ Sbjct: 640 LRSMGVKLALDDFGTGYSSLSYLKRLPINNVKIDKSFIRDIETDPDDATIITAIIRMSHG 699 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 R+ VIAEGVE+ + L K GC Q QG++ +P+P + Sbjct: 700 LRLNVIAEGVENINQLEFLKKEGCDQMQGFIASRPVPADEF 740 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 97/462 (20%), Positives = 188/462 (40%), Gaps = 25/462 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKN--------M 383 I ++ EG+ + I I+E K AE K+ L +D + Sbjct: 936 SISTIRGAEGNTEYYIGSFVDISERKAAE----EKISHLAHFDTLTDLPNRSNLQGRLDQ 991 Query: 384 AIIESNN---NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTF 440 A+ + + +AV + L + + G + ++ ++ R+ + Sbjct: 992 ALASARREGHGRSVAVMFLDLDRFKNINDTLGHHVGDALLLEVAARLRSSVRDSDVVARL 1051 Query: 441 NADLYLLLCRENVQTFTRKIA--MVNDFDSSFGYRNLRIH----KSAICEPLQGENAWSY 494 D ++++ ++A ++ ++ +H P GE+ Sbjct: 1052 GGDEFVVVLTGADALAAERVAGKILKALSRAYQIEGHALHSTSSIGIAVFPADGESVEVL 1111 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 + A+ + + F + + + ++ A++ + L YQP VD Sbjct: 1112 MQNADAAMYHAKSAGRNNVQFFTASMNEAASDRRQLEEDLHLALQQKQFVLHYQPQVDAQ 1171 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 R + EAL RW G++ P +F+ +AED G I +G +++TA + + +S A Sbjct: 1172 -RRVFAVEALLRWQHPHHGLVPPARFVPLAEDTGLIVPIGQWVLETACAQIKAWSVDART 1230 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 + + +NVS Q +P F E + +G L +E+TE+++ + Sbjct: 1231 RK-LQVAVNVSARQFRQPDFVELLRQAIDNSGANPARLKLELTESLVLDNVADTIDKMNA 1289 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARY 732 ++ GV S+DDFGTG S+L + D +K+D F + I + I + R Sbjct: 1290 IKLLGVTFSMDDFGTGYSSLSYLTRLPLDQLKIDRAFVCRLPENRSDAVIAQTIVTMGRS 1349 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 + V+AEGVE+E + L GC QG+L+ +P+ A++ Sbjct: 1350 LGLKVVAEGVETEAQRQFLDSHGCDGYQGFLFSRPLAVDAFE 1391 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 119/526 (22%), Positives = 228/526 (43%), Gaps = 42/526 (7%) Query: 290 PFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIE--------------A 335 P +++ L + + E+ + L T ++ A Sbjct: 346 PATCVLLGFSRNELTGADIHALLSGPVQEVDSELERCLRETRELSLCHRDGAELVVEAMA 405 Query: 336 LKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES------- 388 ++ GD + + + + I + + + +LL ++D +G + + Sbjct: 406 TQVPHGDDQALCLMFHDITDRRRFQ----EELLHQATHDTLTGLPNRSLLEDRLNQAVAG 461 Query: 389 --NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYL 446 Q +A+ + L + V G ++++R + RI C D ++ Sbjct: 462 ARRRGQMVALLMFDLDNFKVVNDTLGHTAGDQLLRSVAARIRSFVRNCDTFARLGGDEFV 521 Query: 447 LLCRENVQTFTRKIAMVNDFDS----SFGYRNLRIHK----SAICEPLQGENAWSYAEKL 498 ++ N+ + + F + F I P G+ + +K Sbjct: 522 IVLT-NLTRMDDAVTVAESFRNLLAMPFFLGGREIFITASMGISLFPDDGDTMEALIKKA 580 Query: 499 KLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAI 558 A+ I++ + F F + ++ + I +R A+E GE+ L YQP ++ T A+ Sbjct: 581 DTAMYHIKESGRNSFQFFAEEMNQKVNARLTIETGLRRALEKGEMLLHYQPRLEPGTGAV 640 Query: 559 LGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDF 618 +G EAL RW S + G+ISP FI IAED G I E+G ++ TA + + + D Sbjct: 641 VGMEALVRWNSPDMGLISPADFIPIAEDSGLIVEIGDWVLATACCQALEWHRMG--HDSL 698 Query: 619 LLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQ 678 + +N+S Q F +R I++++GL + + +E+TET + + + +LR++ Sbjct: 699 RVSVNISARQFVGHDFVDRVVRIIEQSGLSPHFVELELTETALTHNVDETVKIMNRLRER 758 Query: 679 GVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNRIP 736 G+ ISIDDFGTG S+L D +K+D F D+ IV I +A + + Sbjct: 759 GITISIDDFGTGYSSLNYLKRFPVDVLKIDKSFIDDMVKRREDAAIVATIIGIAHHMHMK 818 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK--SGKLV 780 V+AEGVE+ + + L++ C + QG+ + +P+P +++ +G+ V Sbjct: 819 VVAEGVETAEQMKLLMEGNCEEIQGFYFSRPLPPEEFERYIAGRTV 864 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 111/457 (24%), Positives = 191/457 (41%), Gaps = 23/457 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------- 385 I+ ++ G I + E K+ E ++ L +D +G + Sbjct: 585 IQTMRDSRGTLTHYIGTFTDLTERKETE----ERVQWLAHFDPLTGLPNRTLLHIRSNLA 640 Query: 386 --IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + ++ LA+ + L + V G ++++++ QR+ + I D Sbjct: 641 ISLAQRRHEPLALMFLDLDNFKNVNDSLGHGVGDELLKQFSQRLVNAVREQDTISRLGGD 700 Query: 444 LYLLLCR----ENVQTFTRKIAMVNDFDSSFGYR--NLRIHKSAICEPLQGENAWSYAEK 497 ++L+ + ++ + + NL + P G + + Sbjct: 701 EFVLVLPGTDTDGAAYLAERLLNIAARQYNIERHEINLTVSIGIAMYPTDGTDFDTLWRS 760 Query: 498 LKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 A+ + +++ F + I +R A+E + LVYQP + +NT Sbjct: 761 ADAAMYRAKQSGRNDYCFFTTEMQARSARTLQIDNALRRALERNQFSLVYQPQLSLNTNR 820 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 I+G EAL RW + G P +FI IAE G I +G ++KTA+ + R + D Sbjct: 821 IVGFEALIRWTHPQFGNTPPDEFIPIAESNGQIIPIGEWVLKTAVRQLRLWQDNGL--KD 878 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK 677 + +N+S Q P E I++E G+ L +E+TE V I++LRK Sbjct: 879 VTISVNLSAVQFRHPRLPELVMAILEEAGVSPECLQLELTEGVAMENPLAAITVIDELRK 938 Query: 678 QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRI 735 +G+RISIDDFGTG S+L N S+K+D F D+ IV + LA + Sbjct: 939 KGIRISIDDFGTGYSSLTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVSAVISLADSLGM 998 Query: 736 PVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 +AEGVE+++ L GC + QGY +P+ A Sbjct: 999 ITVAEGVETKEQLEFLRSRGCTEIQGYYLSRPLQADA 1035 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 620 bits (1600), Expect = e-176, Method: Composition-based stats. Identities = 99/461 (21%), Positives = 188/461 (40%), Gaps = 24/461 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---- 388 I ++ +G I + I + K E +L L ++D + ++E Sbjct: 373 ITGIRGPDGTFTHYAGIFSDITQRKLNE----ERLHYLANHDPLTDLPNRTLLMERLGAA 428 Query: 389 -----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + +A+ + L + + G +K+++ + R+ + D Sbjct: 429 LTRAHRQGKRVALMFLDLDRFKFINDTLGHAVGDKLLQTVASRLTGSLRASDTVARLGGD 488 Query: 444 LYLLLCRE--NVQTFTRKIA-MVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAE 496 + ++ + +++ + +++ + P G Sbjct: 489 EFNIVLEDIRDLRGVAQTAQKLIDRVQGMVTLDGHDVYVTASVGIAIYPDDGSTPEVLRM 548 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 A+ ++ + F F + + N+ A+ E L +QP VD+ Sbjct: 549 NADTAMYRAKERGKNNFQFFTADMNASTLARLRLESNLHRALARQEFQLHFQPKVDLAHG 608 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 I G EAL RW S E G +SP FI IAE+ I+ +G +++ A + RH+ L Sbjct: 609 HIYGMEALLRWRSHELGPVSPADFIPIAEESNLISTIGEWVLEQACRQARHWLNLGLLPG 668 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +N+S Q+ + I++ + L + L +EITE+V ++ L+ Sbjct: 669 --TVAVNLSSKQMTQGDIVATVRRILEHSNLPGHYLELEITESVAMDNTGEMIRTLKNLK 726 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNR 734 GVRI+IDDFGTG S+L ++ D +K+D F D+ I I + + Sbjct: 727 ALGVRIAIDDFGTGYSSLSYLKQLPIDVLKIDRSFVTDLHEDRDDAAIASAIISMGQSLN 786 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 + +AEGVE E+ + L+ GC QGYL+ +P+P + ++ Sbjct: 787 LQPVAEGVEREEHRQFLLDHGCQYGQGYLFSRPVPAATMEQ 827 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 620 bits (1600), Expect = e-176, Method: Composition-based stats. Identities = 104/495 (21%), Positives = 208/495 (42%), Gaps = 25/495 (5%) Query: 303 LMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIE 362 L ++ E+ E + + L + + II + ++ ++E E Sbjct: 289 LCQVLKTGKEAREIHEHLRAGHEKRTYEIKASPLYNEDHSIRGIIETSRDLTDILNSEAE 348 Query: 363 RSNKLLSL---ISYDQESGFIKNMAIIESNNNQYL---------AVGIIKLCGLEAVEAV 410 + K L ++DQ + + A+ I L + + Sbjct: 349 LNEKTQHLQFVTTHDQLTHLPNKELFFDRLERATFKTHRSPFFTALLFIDLDRFKHINDS 408 Query: 411 FGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDS-- 468 G + +++++++ +R++ + + D +L++ E+++ + + +F Sbjct: 409 LGHEIGDQLLQEVAKRLSTSIRKTDTLARMGGDEFLIII-EDIKELSHVSTVAKNFIDTI 467 Query: 469 --SFGYRNLRIHK----SAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLN 522 SF + P ++ ++A+ + ++ F + Sbjct: 468 LPSFTIDGHELFITPSMGISIAPTDTQHPKELLAFAEIAMYQAKGLGGNKCQFYTAEMNS 527 Query: 523 EIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFIT 582 + I + +R A+ + L YQP DI + ++G EAL RW + G+ISP FI Sbjct: 528 RAKTRIELESYLRKAVNQDQFVLYYQPQFDIQSGELVGCEALLRWQHPQMGMISPNDFIP 587 Query: 583 IAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIM 642 +AE+ G I E+G +++ A + + + + +N+SP Q EP F E ++ Sbjct: 588 LAEETGVIIEIGEWVLQEACLQNKKWQDAG--HSPIRVAVNISPRQFREPGFLEMIERVV 645 Query: 643 KENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINP 702 + G+K L +EITE+++ + ++QL+ +G+ ++IDDFGTG S+L Sbjct: 646 QTTGIKPEWLELEITESLLMDDIDSAINILKQLKAKGIHLAIDDFGTGYSSLSYLKRFPL 705 Query: 703 DSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQ 760 +K+D F DI I + + LA + V+AEG+E+++ L + GC Q Sbjct: 706 SRLKIDRSFVRDITTDDNDASITKAVIALAHSMNLKVVAEGIETQEQLLFLKEKGCEVGQ 765 Query: 761 GYLYQKPMPFSAWDK 775 GYLY P+ +D Sbjct: 766 GYLYSPPVAKEPFDH 780 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 620 bits (1599), Expect = e-176, Method: Composition-based stats. Identities = 112/452 (24%), Positives = 188/452 (41%), Gaps = 24/452 (5%) Query: 339 REGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII---------ESN 389 + G + I I E K AE +++ + +D +G +A++ Sbjct: 370 QSGLPAHYVWILADITERKQAE----DRMRHIAQHDALTGLPNRLALLMRLAQLLPEARR 425 Query: 390 NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC 449 + +AV I L + + G ++++R++ R++ + + D ++++ Sbjct: 426 HGWTVAVMFIDLDRFKIINDTLGHQVGDEMLREVACRLSNLLRETDFVARLGGDEFVIIL 485 Query: 450 RENVQTFTRKI---AMVNDFDSSFGYRNLRIH----KSAICEPLQGENAWSYAEKLKLAI 502 I +++ ++ +H P G + + A+ Sbjct: 486 PSISSPADAAIVSGKIISALSTAIEAEGHELHTSPSIGISIFPDDGPDGDIVLKNADTAM 545 Query: 503 SSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAE 562 + + + F E + I R +RHA+ EL LV+QP G E Sbjct: 546 YHAKAAGRNNYQFFAADMNRTAAERLNIERKLRHAIARNELSLVFQPQFRAEDTTPTGVE 605 Query: 563 ALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHI 622 AL RW G+ISP +FI +AE+ G I E+G ++ TA E + + + Sbjct: 606 ALLRWHHPTDGMISPARFIPVAEETGMIVEIGDWVLATACHEMARWINAGL--KPLRIAV 663 Query: 623 NVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRI 682 NVS QL F E + +GL A L +EITE+ + + +E+L + GV + Sbjct: 664 NVSARQLRRRDFCETVANALTTSGLPAELLELEITESSVMENPQEAIHILERLGRMGVTL 723 Query: 683 SIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAE 740 +IDDFGTG S+L D +K+D F DI I LA + VIAE Sbjct: 724 AIDDFGTGYSSLAYLKLFPIDHLKIDRSFVADIEHDLNDRAIAFGTIALAHSLGLNVIAE 783 Query: 741 GVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 GVE+ED L GC + QG+L+ KP+ +A Sbjct: 784 GVETEDQHELLRANGCDEVQGFLFSKPLTGAA 815 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 620 bits (1599), Expect = e-176, Method: Composition-based stats. Identities = 103/458 (22%), Positives = 189/458 (41%), Gaps = 24/458 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKN--------- 382 + ++ +G ++ I E K AE ++ L +D +G Sbjct: 749 AVSVVRDADGVLTHYVASFTDITERKLAEA----QIKHLAYHDPLTGLSNRFSLQTQLDQ 804 Query: 383 MAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + + LAV + L +++ G ++++ ++ +R+ + + Sbjct: 805 TLALARREQRTLAVVFLDLDRFKSINDSLGHALGDQLLVEVARRLRDNVRDSDIVARLGG 864 Query: 443 DLYLLLCRE--NVQTFTRKI-AMVNDFDSSFGYRNLRIH----KSAICEPLQGENAWSYA 495 D ++++ E + R ++ + +H P G++A + Sbjct: 865 DEFVVVLTEVGDAAGAARVADKLLGALVPRYRIGGHALHTTASIGISLYPHDGDDADALM 924 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 + A+ + F + + + ++R A+E G+ L YQP ++ + Sbjct: 925 KNADTAMYHAKSQGRDNVQFFTPEMNQSVLKRLQFDHDLRVAVEAGQFELHYQPQINSTS 984 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 ++ EAL RW G++SP +FI IAE+ G I LG ++ A + R + Sbjct: 985 GRVVKVEALVRWQHPREGLVSPAEFIPIAEETGLILPLGEWVLNEACRQLRLWRDAGIT- 1043 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 D + +N+S QL+ P + +GL+ LC+EITE+V R ++ L Sbjct: 1044 -DLTVAVNLSAHQLHSPALIPMVARTLGNHGLEGADLCLEITESVAMRDTTASIAQLQAL 1102 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYN 733 R G+ +SIDDFGTG S+L + D++K+D F +I I LA Sbjct: 1103 RDLGIHLSIDDFGTGYSSLSYLKLLPIDTLKLDQSFVCEIEFNPSDVAICAATIALAHSL 1162 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFS 771 + V+AEG+E+E R L C QGYL+ P+P Sbjct: 1163 GLEVVAEGIETETQRRLLASHRCDFMQGYLFSAPLPAE 1200 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 620 bits (1599), Expect = e-176, Method: Composition-based stats. Identities = 113/460 (24%), Positives = 198/460 (43%), Gaps = 24/460 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------- 385 I A++ +G E +++ + I E K E+ + ++D +G + Sbjct: 567 ITAVRDTDGRIAEYVTLFSDITERKQQEVA----MWRQANFDPLTGLANRSLLQDRLDRA 622 Query: 386 --IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + + + + L G + + G D ++++ + +R+ + D Sbjct: 623 LAHARRHGCKVGLLFLDLDGFKWINDSLGHDVGDELLVDVARRLNSCVRDEDTVARLGGD 682 Query: 444 LYLLL---CRENVQTFTRKIAMVNDFDSSFGYRNLRIHKS----AICEPLQGENAWSYAE 496 + ++ + +V F R R H S P G++ + Sbjct: 683 EFTVVVHDLADRADLGAIADKLVAVLREPFALRGARHHISGSVGITVFPDDGDDVQTLLR 742 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 +A+ + + + + + ++R A+E L YQPIVD + Sbjct: 743 NADIAMYKAKQAGKNRAQPYAPHMQADALARVHLEADLRMAVEQRAFELHYQPIVDCASG 802 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 A++GAEAL RW ERG+ISPL+FI +AE+ G I +G +++ + + R + R Sbjct: 803 ALVGAEALIRWKHPERGMISPLEFIPVAEECGLIVPIGEWVLREVVRQRRDWLARG--HP 860 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 L +NVS Q E E T++ E G +SL EITE+V+ +E+ + ++ Sbjct: 861 PLRLTLNVSGVQFREAGLPELVRTLLAEFGTARSSLVFEITESVLMGGSENVEARMCDIK 920 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNR 734 +QG+ ++DDFGTG S+L D +K+D F D +V I ++A Sbjct: 921 EQGICFALDDFGTGFSSLSYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEAIINMAHSLG 980 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 + V AEGVES + L LGC QGYL KP+ A++ Sbjct: 981 LRVTAEGVESAEQREFLRALGCDYLQGYLIGKPLAADAFE 1020 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 620 bits (1599), Expect = e-176, Method: Composition-based stats. Identities = 110/469 (23%), Positives = 208/469 (44%), Gaps = 29/469 (6%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNNQ 392 + A+K R G + + + + + K AE K+ +L +D + +++ Sbjct: 426 VTAVKDRNGMVTNYVGVLSDLTQRKAAE----EKIENLAFFDPLTKLPNRRLLLDRLKQA 481 Query: 393 Y---------LAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 AV I L +A+ +G + +++++ +R+ + F D Sbjct: 482 MASATRSVTNGAVLFIDLDNFKALNDTYGHPMGDLLLQQVAKRLVSSVRDGDTVSRFGGD 541 Query: 444 LYLLLCRE------NVQTFTRKI--AMVNDFDSSFGYRNLRIH----KSAICEPLQGENA 491 +++L + + + + + H A + ++ Sbjct: 542 EFVVLLEGFDENPLDAASQAETVGEQIFAALRQPYLIGTHEYHGTSSIGATLFNDKQQSI 601 Query: 492 WSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIV 551 ++ +A+ + + F D I + + ++R A+E + L YQ V Sbjct: 602 DELMKQADIAMYQAKKEGRNVLRFFDPQMQETIAKRTALEGDLRKAIENHQFQLHYQIQV 661 Query: 552 DINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQR 611 D +R GAEAL RW E G++SP +FI +AE+ I +GY +++TA + + Sbjct: 662 D-ESRHPFGAEALIRWFHPEHGMVSPDQFIPLAEESDLILPIGYWVLETACARIQRWQHD 720 Query: 612 ASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLN 671 A F+L +NVS Q + F + +++++ + + L +E+TE+++ E Sbjct: 721 AKT-SGFVLSVNVSAKQFRQTDFVNQVQSLIQQYEINPSLLKLELTESMLLDNIEDTIAT 779 Query: 672 IEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDL 729 + L++ GV+ S+DDFGTG S+L+ + D +K+D F DI + IVR I + Sbjct: 780 MSALKELGVKFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIAVDASDRAIVRTIIAM 839 Query: 730 ARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 A + VIAEGVE+E+ + L GC QGYL+ KP+P ++ S + Sbjct: 840 AHSLDLDVIAEGVETEEQQKHLSSKGCKNFQGYLFGKPVPIEQFETSLR 888 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 620 bits (1599), Expect = e-176, Method: Composition-based stats. Identities = 106/459 (23%), Positives = 200/459 (43%), Gaps = 23/459 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------ 385 + A+K +G +SI I+E K AE ++ L +D +G Sbjct: 499 SVSAVKGPDGSTTHYVSIFTDISEFKRAEA----QIRYLSYHDDLTGLPNRAYFQARLDQ 554 Query: 386 ---IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + + + +A+ ++ L + + G ++++ ++ +RI + Q + Sbjct: 555 LIEAAARDRKQIALVVLDLDRFKTINDSLGHSVGDELLCQVAERIQDCTGQGDFVARQGG 614 Query: 443 DLYLLLCREN--VQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAE 496 D ++++ ++ V+ AM++ + P ++ S + Sbjct: 615 DEFVVILADSDAVRAARVANAMISAIAKPAVAGGRTLIVTPSLGISLYPHDAGDSESLIK 674 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 A+ + + + F E + + + A+ GE L YQP +++ +R Sbjct: 675 SADAAMYHAKSLGRNTYQFFSAEMSAVATERLALENALHQALSNGEFRLYYQPQIEVCSR 734 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 ++G EAL RW E G + PL+FI +AE+ G I+ +G +++ A + R + Sbjct: 735 RLIGLEALIRWRHPEVGWVPPLRFIPLAEETGIIHRIGRWVLEEACRQQREWQAAGLCI- 793 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +N+SP QL + F E+ ++ L L +E+TET + R + +L+ Sbjct: 794 -VPVAVNLSPLQLQKDDFPEQVEALLSGCRLAPGLLELELTETAVMRDVGRMSDMLRKLK 852 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNR 734 ++G R SIDDFGTG S+L D +K+D F D+ I R I LA+ Sbjct: 853 ERGTRFSIDDFGTGYSSLGYLNRFPVDKLKIDQSFIRDVTRREDHAAITRAIIALAKQLH 912 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 + V+AEGVE+ + L + GC AQG+ + +P+P Sbjct: 913 LKVVAEGVETAEQLEFLERAGCDGAQGFYFSRPVPADEI 951 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 108/462 (23%), Positives = 194/462 (41%), Gaps = 24/462 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--- 388 I A+ +G I I + I + K++E ++ L +D +G + + + Sbjct: 407 SITAITEGDGGVSHYIGIFSDITDRKESEA----RIRHLAHHDALTGLPNRLLLQDRLGQ 462 Query: 389 ------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 N+ AV + L + + G + + ++R++ QR + + Sbjct: 463 AILKARRNSTQAAVLFLDLDRFKTINDTLGHEIGDGLLRQVTQRCLGAVRETDTVARQGG 522 Query: 443 DLYLLLCRE-----NVQTFTRKIAMVNDFDSSFGYRNLRI--HKSAICEPLQGENAWSYA 495 D ++++ + + T RKI G L + P G + Sbjct: 523 DEFVIVLPDLEHGQDAGTIARKILAALTEPCRLGPHELTVTGSIGIALYPGDGADPSMLL 582 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 A+ + + F F + + +R A++ EL L +QP V+ Sbjct: 583 RNADAAMYRAKADGRNGFQFYAADMNTHSLGELLLEHQLRGALDRNELRLYFQPKVNAAD 642 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 I G EAL RW + G+++P +F+ AE+ G I +G +++ A + R + Sbjct: 643 GCIEGCEALLRWQHPDLGLLAPGRFVPAAEESGLIVPIGEWVLREACRQLRAWIDAGL-- 700 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 + +N+S Q + E+ L A L +E+TET++ R E + +L Sbjct: 701 APVPVAVNLSGQQFAHQDIVALVREALAEHRLPAPMLELELTETMLMRDLERTIATLAEL 760 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYN 733 R GV ++IDDFGTG S+L + + +++K+D F DI + GKI + LA Sbjct: 761 RAMGVTLAIDDFGTGYSSLAYLRQFDVNALKIDRSFVHDIRPGSSDGKIATAVIALAHNL 820 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 + V AEGVE+ L + GC Q QG+L+ +P P A+ + Sbjct: 821 GLTVTAEGVETAAQQHFLARHGCDQLQGFLFGQPEPAEAFAQ 862 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 116/454 (25%), Positives = 205/454 (45%), Gaps = 24/454 (5%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES----- 388 ++ +G +I E K E E + ++D +G + + Sbjct: 242 RSVYNSDGTLLFFEGTVEAITERKLHEAE----IQFQATHDALTGLPNRTLLYDRMQQAV 297 Query: 389 ----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 + A+ + L + + G +++++ QR+ + + D Sbjct: 298 LHSERYGKLTAIAFLDLDQFKFINDSLGHQVGDELLKITAQRLTSCLRESDTVARQGGDE 357 Query: 445 YLLLCRE--NVQTFTRKIA-MVNDFDSSFGYRNLRIHKSAICE----PLQGENAWSYAEK 497 ++LL + N + T + ++++ + +L + P G +A + + Sbjct: 358 FVLLLTDQPNEEAITHTMQRVLHEVSQPWKANDLEFQITCSIGLTLCPDDGRDAETLLKN 417 Query: 498 LKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 A+ ++ + F + + + + + + +R A+ + L YQP V + + Sbjct: 418 ADSAMYKAKELGRNNFQYFSAEMNSSVTDRLELLNRLRQAITNEDFVLHYQPKVSLASHQ 477 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 I+GAEAL RW SA G++SP FI +AE+ G I LG +++TA + R + Sbjct: 478 IIGAEALVRWNSAHSGMVSPASFIPLAEETGLIIPLGEWVLRTACRQNRAWQDAGY--PP 535 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK 677 + +N+SP QL E I+ E GL+A L +EITE+V+ E + + QLR Sbjct: 536 IPISVNLSPRQLARGDIVEVVERILTETGLEAQHLELEITESVMTTDVEKSFALLTQLRS 595 Query: 678 QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRI 735 GV+IS+DDFGTG S+L D++K+D F DI + IV+ I L R + Sbjct: 596 LGVKISLDDFGTGYSSLSYLKRFPVDTLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNL 655 Query: 736 PVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 V+AEG+E+ED + L+ GC + QGYL KP+P Sbjct: 656 TVLAEGIETEDQFQFLLANGCDEGQGYLMSKPVP 689 >UniRef50_Q5E8Q7 GGDEF domain protein n=2 Tax=Vibrio fischeri RepID=Q5E8Q7_VIBF1 Length = 852 Score = 619 bits (1596), Expect = e-175, Method: Composition-based stats. Identities = 179/809 (22%), Positives = 340/809 (42%), Gaps = 110/809 (13%) Query: 43 ADSRFELIQKNVGYFFKDIERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLD------ 96 S IQ+ Y D ++ LKDSL + E + E ++ Sbjct: 73 VKSMVNQIQRYQMYHPNDTKQLQQFLKDSLEGIYTGLEQMDVLSFGGEKKEYIGFRREPN 132 Query: 97 -SVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLVDESGRVIFADFNPSKRPW-SVASD 154 S+ L+L D +R ND +++Y G + ++ R + A+++P RPW A+ Sbjct: 133 ASLSLMLQD-------KRTNDDLIIYR-----GSEMSDNIRTVIANYDPRSRPWYKPAAT 180 Query: 155 DSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISAND 214 SW+ Y D + IS T+H D D + V D+ N++L Q + + Sbjct: 181 TFKPSWSKIYTNADEKKEITIS-TMHPVFYDEDFIGV--FAADVKLDSFNKFLSQETKHT 237 Query: 215 -EVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPN-------NA 266 V++L +++LI ++S G+ I + ++ + AV + +A Sbjct: 238 KGVIYLIDD----------QQRLIAHSSVGSVLSIGTQNSPVGSRLFAVESCDETIQQSA 287 Query: 267 LF--------------EIY-FYYPG------------GNLLN--------ASDKLFYLP- 290 + E++ FYY G GN LN SD L +L Sbjct: 288 TYIKNNQLINNKNNDAEVFSFYYKGERYFSQITPYIDGNNLNWYIVISISESDLLGHLQE 347 Query: 291 -------FAFII--IVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREG 341 F ++ I L+V + T+V + F+ N + + + +EA +G Sbjct: 348 EQRRGLFFGIVLAAIGLIVGVYLVTQVTKPIFTTANAARNIAS--GNWNNNVEA----QG 401 Query: 342 DAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES-------NNNQYL 394 E + N+ +M + + + I++D + + +IE + Sbjct: 402 SIYETTLLMNAFNDMTNKLQSSFDAMRQQITFDSLTQVLSRQGLIEQCRIMLDKKEHYEQ 461 Query: 395 AVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCD-IVTFNADLYLLLCR--E 451 + +I + + FG+ E +++++ + R+ +A I D + L + Sbjct: 462 GLLVIGINNFRDINDSFGILEGDQLLKNISDRLQCSFAHDNIAIARVGGDEFALFFSKLD 521 Query: 452 NVQTFTRKIAMVN-DFDSSFGYRNLRIHKSAICEPLQGE---NAWSY-AEKLKLAISSIR 506 +V+ + + F + F + S + G+ ++ + +A+ + Sbjct: 522 DVEQLKQYARDMEGCFMTPFRVASNNSLLSISTGLVYGDLSCDSMTLWLRNASIALGQAK 581 Query: 507 DHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCR 566 + + + + A++ EL YQPI+DI + +GAEAL R Sbjct: 582 KNNLN-MSLYTPEMAEASLHKANMTAELSLAIKNKELVPFYQPIIDIKSGKTIGAEALIR 640 Query: 567 WVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSP 626 W+S +RG++SPL FI +AE+ G I +G Q++ A + + DF +H+N+S Sbjct: 641 WLSPQRGMVSPLDFIPLAEENGMIIPMGSQVLTQACLDTVERIDQGLWPADFHMHVNLSV 700 Query: 627 WQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDD 686 QL + +F + ++ + +L +EITE+ + + ++++R GV+I+IDD Sbjct: 701 CQLTQNNFLDELKAVLHNTSMAPENLTLEITESRLVNHDNSTINTMQKIRDLGVQIAIDD 760 Query: 687 FGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVES 744 FGTG S+L +++ D +KVD F D+ I + ++ + I ++AEG+E+ Sbjct: 761 FGTGYSSLAYIHKLPFDVLKVDRSFIKDLTAENIDSSIAAAVCNMTQGFDITLVAEGIET 820 Query: 745 EDVARELIKLGCVQAQGYLYQKPMPFSAW 773 ++ A+ L L AQG+LY +P+P W Sbjct: 821 QEQAKLLASLNYHHAQGFLYSRPIPLEDW 849 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 112/471 (23%), Positives = 196/471 (41%), Gaps = 30/471 (6%) Query: 328 DSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE 387 D + ++ +G I++I I + K E E + L YD +G M +++ Sbjct: 1025 DVEGRWTLIQGEQGQPDAILAIDTDIGQRKATERE----IQRLAFYDSLTGLPNRMLLMD 1080 Query: 388 ---------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIV 438 Q A+ I L + + G D+ + +++++ R+ + Sbjct: 1081 RMRHALATAQRRRQGGALLFIDLDNFKTLNDTLGHDQGDVLLQQVAARLNTCVRSVDTVA 1140 Query: 439 TFNADLYLLLCRE----------NVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICEPL-Q 487 D ++++ + +T KI V + R S P Sbjct: 1141 RLGGDEFVVMIEGLSTHPGELAMSARTVGEKILAVLATPYVLQGYHYRSTPSIGVAPFGD 1200 Query: 488 GENAW--SYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFL 545 G + ++ LA+ + + F D + + ++R A+ + L Sbjct: 1201 GRTSTVGELLKQADLAMYQAKTAGRNTLRFFDPGMQAVVTARAELENDLRTALAREQFML 1260 Query: 546 VYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEF 605 YQP +D ++ G EAL RW +RG++SP +FI +AE+ G + LG ++ TA + Sbjct: 1261 HYQPQID-RRGSVTGVEALVRWPHPQRGMVSPGEFIPLAEETGLVLPLGRWVLHTACAQL 1319 Query: 606 RHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERIN 665 + Q + + +NVS Q + F E + G A+ L +E+TE++ Sbjct: 1320 ARW-QHVPGRGHLSMAVNVSSRQFHHEAFVEDVVRAITATGAPASRLKLELTESLFVEDM 1378 Query: 666 EHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIV 723 E + LR GV S+DDFGTG S+L + D +K+D F D+ IV Sbjct: 1379 ETTIATMAALRSHGVGFSLDDFGTGYSSLSYLKRMPLDQLKIDQSFVRDLLADPNDAAIV 1438 Query: 724 RIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 I L+R + VIAEGVE+ + L + GC QGY + +P+P +A + Sbjct: 1439 DTIIALSRSLGLDVIAEGVETAEQRTRLEQAGCRAYQGYFFSRPLPETALE 1489 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 109/459 (23%), Positives = 186/459 (40%), Gaps = 24/459 (5%) Query: 335 ALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII-------- 386 + G ++ I I E K +E ++ L ++D + Sbjct: 122 PVFNDTGKTIGLVGIGRDITERKQSE----EQIQYLATHDSLTALPNRFMFSKLLAVAIE 177 Query: 387 -ESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLY 445 + + LAV I L + + G D ++++ + R + D + Sbjct: 178 SARRHQRQLAVLFIDLDRFKNINDTLGHDAGDQLLITMANRFRTCLRTSDIVGRLGGDEF 237 Query: 446 LLLCRE-----NVQTFTRKI--AMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKL 498 ++L E +KI A + D + P E+ + + Sbjct: 238 VILLPELESHDQAARVAQKILSAAIQPLDVHGQECRVTASIGICLYPEDAEDEQALMKNA 297 Query: 499 KLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAI 558 +A+ ++ + + F E + + N+R A+E E FL YQ ++ T I Sbjct: 298 DIAMYRAKEEGKNNYQFYSPDLKVRSLERLMLENNLRKALERHEFFLHYQAKRNLKTGKI 357 Query: 559 LGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDF 618 G EAL RW E G ISP FI +AE+ G I LG +++ A + + Q+ Sbjct: 358 AGVEALVRWQHPELGTISPAHFIPLAEETGLIVHLGRWVLRAACTQGVIWQQQGL--PPI 415 Query: 619 LLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQ 678 + +N+S Q + + ++E+GL L +EITE +I + E + ++ Sbjct: 416 CIAVNLSARQFFDDNLINDIANALRESGLAPELLEMEITEGMIMQDAERAIRILTGIKAL 475 Query: 679 GVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIP 736 GVR++IDDFG G S+L D++KVDS F DI I I + + + Sbjct: 476 GVRLAIDDFGVGYSSLAHIKRFPIDTLKVDSSFIRDIPANREDRAITEAIIAMGKTLSLT 535 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 VIAEGVE+++ L C Q QGY + KP+ + + Sbjct: 536 VIAEGVETQEQENFLRDSACDQTQGYYFSKPVSPEEFTR 574 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 617 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 110/466 (23%), Positives = 212/466 (45%), Gaps = 24/466 (5%) Query: 331 DQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES-- 388 + ++ + I E+K ++ L ++ YD +G + Sbjct: 390 GTVAPIRNDSDVIIGTVVALKDITEIK----KKDEILYNMEYYDPLTGLPNRSLFSDRLK 445 Query: 389 -------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFN 441 NN+ A+ I+ L +A+ G + +++++ ++I + + Sbjct: 446 MALAQSKRNNEMCALIILDLDNFKAINDTLGHSVGDMLLKQVAEKIKGYLREVDTVARIG 505 Query: 442 ADLYLLLCRE--NVQTFTRKI-AMVNDFDSSFGYRNLRIHKSAI----CEPLQGENAWSY 494 D ++++ + ++ TR ++ F + + +A P GE+ + Sbjct: 506 GDEFIIIQPQIKDINDATRAADRILKKFQQPWILEGKEYYITASMGIGIYPNGGEDPQTI 565 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 + A+ ++ + + ++ ++ + + I ++R A+E E L YQP +DI Sbjct: 566 FKNADTALYRAKELGRNNYQLYTESMNQKVLQRLDIENSLRRAIEKEEFVLFYQPQIDIK 625 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 T I+G EAL RW + G++ P++FI +AED G I +G +++TA + + + + Sbjct: 626 TGKIVGFEALLRWYHPDYGLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIECGLE 685 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 L+ +N+S Q + E I GL L +EITE+ + + Q Sbjct: 686 PH--LISVNLSARQFQRSNIVEVIDRIRSSTGLAPELLELEITESTAMQDLSFTIDVLNQ 743 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARY 732 LRK+G+R+S+DDFGTG S+L ++ D++K+D F DI + I + + LA Sbjct: 744 LRKKGIRVSLDDFGTGYSSLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLAHK 803 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 + V+AEGVE+++ L K C +AQGYL+ KP+P +K + Sbjct: 804 LDLTVVAEGVETKEQLLFLKKEKCDKAQGYLFSKPLPAEEIEKMLR 849 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 617 bits (1591), Expect = e-175, Method: Composition-based stats. Identities = 99/463 (21%), Positives = 203/463 (43%), Gaps = 24/463 (5%) Query: 331 DQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES-- 388 D + R+G + + + ++E + + K+ L +D +G + E Sbjct: 358 DSAAPIHNRDGQVAGAVIVFHDVSESRAMAL----KMAHLAQHDFLTGLPNRALLTERLS 413 Query: 389 -------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFN 441 +N+ + + + L + + G +++++++ +R+ + Sbjct: 414 RAIGQARRHNKRVGMLFLDLDYFKHINDSLGHAVGDQLLQQVAERLIVCIRDTDTVCRQG 473 Query: 442 ADLYLLLCRE-----NVQTFTRKIAMVNDFDSSFGYRNL--RIHKSAICEPLQGENAWSY 494 D +++L E + K+ L + P G +A + Sbjct: 474 GDEFVILLAEIEQARDAAPIAEKLLAAFAEPCLIAGNELHVSLSIGISIYPDDGMDADTV 533 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 + A+ + + + + F ++I N+R A+ GE L YQP +D+ Sbjct: 534 MKNADTAMYHAKANGRNNYQFFTTEMNTRAVRRLFIEGNLRRALRQGEFMLYYQPKIDLA 593 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 + ++G+EAL RW E G++ P +F+ IAE+ G I +G +++ A + R + + + Sbjct: 594 SGMMIGSEALIRWQDPEHGLVYPKQFVPIAEESGLIVPIGSWVLREACRQVRAWQESGLV 653 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 + +N+S + F E I+KE G+ + L +E+TE+++ E +E Sbjct: 654 A--VPVSVNISAVEFRHKDFLEGVALILKETGMLPSYLELELTESILMHDAESSATVLEA 711 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD--IFGTAGKIVRIIFDLARY 732 L+ G++++IDDFGTG S+L +++K+D F D I IV + + + Sbjct: 712 LKTMGMQLAIDDFGTGYSSLSYLKRFPINTLKIDQSFVHDIAIDPDDASIVGAMIGMGKN 771 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 + V+AEGVE+E+ L L C + QG+L+ +P+P + + Sbjct: 772 LKQRVVAEGVETEEQLAFLRTLHCDEGQGFLFGRPLPADEFAR 814 >UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Caulobacteraceae RepID=B8H3B9_CAUCN Length = 748 Score = 617 bits (1591), Expect = e-175, Method: Composition-based stats. Identities = 115/459 (25%), Positives = 199/459 (43%), Gaps = 28/459 (6%) Query: 335 ALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI--------- 385 AL EG A+ ++ + IAE K AE ++ L YD + + Sbjct: 247 ALLNAEGRAEYLLGVSEDIAERKRAEA----QIARLAHYDPLTDLPNRVLFQKSLGEALA 302 Query: 386 IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLY 445 S LAV + L + V G + +++ +R+ + + D + Sbjct: 303 RRSRKGDALAVHFVDLDRFKTVNDTLGHPLGDALLKIAAERLRGCVREGDTVARLGGDEF 362 Query: 446 LLL---CRENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKL 498 ++ ++ +V + F + + P G++A +K Sbjct: 363 AIVQTGLDDSNGATRLAARIVEAMAAPFDLQGHHVVIGASVGVSLAPTDGDDADELLKKA 422 Query: 499 KLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAI 558 +A+ + + F + A +++ + ++R A++ GE L YQP+ + + Sbjct: 423 DMALYRAKADGRGAYHFFERAMDEQLQARRALELDLRRALQAGEFELFYQPLYHLGDERV 482 Query: 559 LGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDF 618 G EAL RW ERG++SP FI +AE+IG I +LG +++ A E ++ + Sbjct: 483 TGCEALLRWRHPERGMVSPADFIPLAEEIGLIVQLGEWVLRRACAEAANW------PEHV 536 Query: 619 LLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQ 678 L +N+SP Q + + + +GL A L +EITE+V+ + ++ + L+ Sbjct: 537 RLAVNLSPAQFRDRGLVRTVVSALAASGLPAQRLELEITESVLLQDSQANMTMLHDLKAL 596 Query: 679 GVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIP 736 GVRIS+DDFGTG S+L D IK+D F DI + I++ + DL + Sbjct: 597 GVRISMDDFGTGYSSLSYLRSFPFDKIKIDQTFVRDILHDSDAMAIIKAVLDLGASMGVV 656 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 AEGVE++ L + GC + QGY +P P S K Sbjct: 657 TTAEGVETQAQLDALRQQGCAEIQGYFISRPAPASEIAK 695 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 617 bits (1591), Expect = e-175, Method: Composition-based stats. Identities = 125/499 (25%), Positives = 219/499 (43%), Gaps = 27/499 (5%) Query: 299 LVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQ-IEALKIREGDAKEIISIKNSIAEMK 357 + Y + R+ + +NT T+ I + EG+ +++ I + + K Sbjct: 214 IFAYAIQHAFSTRKEYMVECRINTQRNDVIWTESKINPIMDEEGNVTKLLLITRDVTDRK 273 Query: 358 DAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVE 408 +E + L +D + ++ LAV + L + V Sbjct: 274 QSE----ETIHHLAYHDALTDLPNRRMYVQQLSKEMMQAKRFQSSLAVLFLDLDRFKDVN 329 Query: 409 AVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLL-----LCRENVQTFTRKI--A 461 FG D + ++ + +R+ + D + + L R +I Sbjct: 330 DSFGHDVGDMLLIEASKRLQACLKPGDVVARLGGDEFTIMQNQLLDRNEATELAEQIMYQ 389 Query: 462 MVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKL 521 + F+ N+ P G+N ++ A+ +++ + + F D + Sbjct: 390 LQRPFELDGHVFNVSCSIGIALYPQDGDNPEDLLKRADTALYTVKSRGKNGYDFFDPSME 449 Query: 522 NEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFI 581 + E I + +R A+E + + YQP +DI T A+ G EAL RWV E GII P +FI Sbjct: 450 AKSLERILMENEMRKAIEQEQFQIYYQPKIDIATSAMTGMEALVRWVHPELGIIPPNRFI 509 Query: 582 TIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTI 641 IAE+ G I LG I+K A + +++ + + +N+S Q+ + E I Sbjct: 510 PIAEETGMILALGEWILKQACKQNKNWHDQGYT---LKVSVNLSARQIYQKDLVEMIKDI 566 Query: 642 MKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEIN 701 ++E L + L +EITE++ + E ++Q+R G++ISIDDFGTG S+ + Sbjct: 567 LQETKLSPHWLELEITESIFVK-MEEATAVLQQIRDIGIQISIDDFGTGYSSFSYIKSLP 625 Query: 702 PDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQA 759 D+IK+D+ F DI + IV+ I +A+ + VIAEG+E D L + GC Sbjct: 626 VDTIKIDASFIRDIHHNQESQAIVKAIVTIAQSLNMNVIAEGIELHDQVAALKENGCDHG 685 Query: 760 QGYLYQKPMPFSAWDKSGK 778 QGYL+ KP+P +D+ + Sbjct: 686 QGYLFSKPLPTDDFDQLLR 704 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 617 bits (1591), Expect = e-175, Method: Composition-based stats. Identities = 110/455 (24%), Positives = 187/455 (41%), Gaps = 24/455 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKN---------M 383 I + +G I++ N + A I +L +YD + Sbjct: 570 IAPVPDADGQTTHHIAVINDVT----ALIRYQEQLEYQANYDSLTRLPNRNLLRDRLQHA 625 Query: 384 AIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 I+ +++ +AV I L G + V G ++++ + R+A + D Sbjct: 626 LIVAQRHHKGVAVVFIDLDGFKNVNDSLGHSVGDRLLSVVADRLARCARASDTVARHGGD 685 Query: 444 LYLLLCRENVQT---FTRKIAMVNDFDSSFGYRNLRIHKS----AICEPLQGENAWSYAE 496 ++++ + V + ++ A P G++A + + Sbjct: 686 EFVIVMTDTVDEQSLIAWMERVRASISEPVWLDGTELYVGCSMGASLFPQDGDDAETLMK 745 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 K LA+ +D + F F + + R +R A+ E L YQP VDI T Sbjct: 746 KADLAMYRAKDMGRNTFQFYQPEMNVSAGARLNLERRLRRALRDNEFLLHYQPQVDIETG 805 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 ++G EAL RW E G+I P +FI +AE+ G I L +++ A + + + Sbjct: 806 QVVGMEALVRWHDPEVGLIPPSQFIPVAEESGLIGPLSEWVLREACRQNKAWQDEGL--P 863 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +N+S Q + + +++E GL L +E+TE+ I R E + +L Sbjct: 864 PARVSVNLSARQFQQRDIAKLVMQVLEETGLDPQYLELELTESTIMRNAEEAVSMLNELH 923 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNR 734 G+ ++IDDFGTG S+L D +K+D F DI I I LA Sbjct: 924 ALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGESSDDETITSAIIALAHSLN 983 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 + VIAEGVE+ L + C + QGY + KP+P Sbjct: 984 LQVIAEGVETSTQLDFLKERACDEMQGYFFAKPLP 1018 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 616 bits (1590), Expect = e-175, Method: Composition-based stats. Identities = 114/460 (24%), Positives = 200/460 (43%), Gaps = 25/460 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE---- 387 I + I+ + I E K AE + + YD +G E Sbjct: 235 SISPITNGNEQITHFIAFQEDITERKQAE----ETIKQMAYYDTLTGLPNRHLFNELMHL 290 Query: 388 -----SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYA-QCCDIVTFN 441 +N+ LAV + L + + G +++++ R+ E + Sbjct: 291 ALAQAHRHNRLLAVLFLDLDRFKHINDTLGHTVGDQLLQASAHRLKECCRRDRDTVARRG 350 Query: 442 ADLYLLLCRE--NVQTFTR-KIAMVNDFDSSFGYRNLRIHKS----AICEPLQGENAWSY 494 D +++L + +VQ R +++ F F ++ + S P G + + Sbjct: 351 GDEFIILLPDIDDVQEAVRVAQKIIDAFTQVFVLPDIELFISTCIGISIFPNDGRDTETL 410 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 + +A+ ++ S + + + + + ++R A++ E L YQP V+I Sbjct: 411 IKNADMAMYRAKEQGRSRYHLYTSSMDEQAFRRLTMENSLRKALQREEFSLYYQPKVNIK 470 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 T I+ EAL RW + E G+I P +FI +AED G I LG +++TA + + + Sbjct: 471 TGQIVCLEALVRWQNPEMGLILPNQFIPLAEDTGLIIPLGEWVLRTACAQNKTWQ--LLN 528 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 + +N SP Q +P + I+ E L L +E+TE V+ + E + + Sbjct: 529 YPPMRVAVNFSPRQFQQPRLTDMVEQILGEADLAPCWLELELTENVMLQNVEKTVQTLNR 588 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARY 732 L G+ ISIDDFGTG S+L ++ ++K+D F DI I + +A+ Sbjct: 589 LSNLGIHISIDDFGTGYSSLSYIKKLPIQTLKIDRSFVHDINTNADDAAIAIAVITMAQS 648 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 R+ VIAEGVE+ + + L L C + QGYL+ KP+P + Sbjct: 649 LRLNVIAEGVETLEQMKLLDGLNCPEMQGYLFSKPLPVAE 688 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 616 bits (1590), Expect = e-175, Method: Composition-based stats. Identities = 100/456 (21%), Positives = 196/456 (42%), Gaps = 24/456 (5%) Query: 335 ALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI--------- 385 + R+G +++ + ++ + E+ K+ L +D + + Sbjct: 302 PILDRQGQIAGTVTVLHDVSVTRAMEL----KMAHLAQHDFLTDLPNRRVLDDRLRQAIS 357 Query: 386 IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLY 445 + + LAV + + + + G +K ++ + +R+ + D + Sbjct: 358 LARRQGKQLAVLFVDIDRFKHINDSLGHGMGDKALQSMAERLTTCVRASDTVARQGGDEF 417 Query: 446 LLLCRE-----NVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICE--PLQGENAWSYAEKL 498 ++L E + +KI G L+I S P ++A + + Sbjct: 418 VILLAEVTTADDAAIVAKKILSAVALPHRIGRHELQISASIGISTCPNDADDAETLIKHA 477 Query: 499 KLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAI 558 +A+ ++ + + F + + + ++R A+E E L YQP +++ T I Sbjct: 478 DIAMYQAKEKGRNNYQFFRADMNERVLQRQSLESSLRLALERQEFLLHYQPKMNLETGHI 537 Query: 559 LGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDF 618 G EAL RW E G++ P FI +AED G + +G +++ A + + + + Sbjct: 538 TGMEALIRWRHPELGLVPPASFIGVAEDCGLMQPIGRWVLQEACRQVKEWMVAGL--NPV 595 Query: 619 LLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQ 678 + +NVS + HF + + ++E L L +E+TETV+ + E + L+ Sbjct: 596 PVAVNVSAVEFRRKHFFDGVISTLRETDLDPRYLELELTETVLMKEAEPTIAVLHALKSA 655 Query: 679 GVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIP 736 GV+++IDDFGTG S+L + D++K+D F D+ IV I + + + Sbjct: 656 GVKLAIDDFGTGYSSLSYLTRLPVDTLKIDRSFVTDVTTRTDNAAIVSAIIGMGKSLNLN 715 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 VIAEGVE+++ L C + QGY + +P+ A Sbjct: 716 VIAEGVETQEQLALLRSHCCAEGQGYYFSRPVSVPA 751 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 616 bits (1589), Expect = e-174, Method: Composition-based stats. Identities = 116/458 (25%), Positives = 209/458 (45%), Gaps = 25/458 (5%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI-------- 385 + +K + G I++ I + + E+ ++ L +D +G + Sbjct: 595 QVVKDQNGGPLSILASAIDITDKRKTEL----QIKKLAYFDSLTGLPNRTLLKDHMELAL 650 Query: 386 -IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 N+++AV ++ L + + G + ++R + +R+ + C + + D Sbjct: 651 GQARRLNKFVAVLLLDLDNFKHINDTLGHATGDLLIRSVAERLRTECRTCDTLARWGGDE 710 Query: 445 YLLLCRE--NVQTFTRK------IAMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAE 496 ++LL + ++Q T + F +S N P G++ + + Sbjct: 711 FVLLLTDLDDIQNTTSATEKFMALLTERPFATSECDINTTASIGIALYPQDGQDPETLLK 770 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 + A+ + + + + F + E + N+R A++ GE+ LVYQP +D+ Sbjct: 771 RADTAMYEAKKNGRNGYHFFSLQLAEQAERRHRMEINLRSALKEGEMQLVYQPQIDLGKV 830 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 I G EAL RW S E G ISP +FI +AE+ G I LG +++ A + + + + Sbjct: 831 RITGMEALLRWQSPEEGTISPARFIPLAEETGLIYPLGEWVLQQACRQGAIWQKTEA--S 888 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +N+S Q ++P + I++E GL + L +EITE+V E + +L+ Sbjct: 889 PLCVAVNLSAKQFHQPDLAKNIKKILRETGLSPHLLELEITESVFLENMEAAIEALTELK 948 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNR 734 K GV+ SIDDFGTG S+L ++ D IK+ +F DI G I++ +A+ Sbjct: 949 KLGVQFSIDDFGTGYSSLSYLKKLPIDRIKIAQEFVRDIDTDDGDKAIIKATIAMAKSLG 1008 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 + +IAEGVE+ L+ GC QGY + KPMP Sbjct: 1009 MKLIAEGVENHQQLAFLLLHGCHAMQGYYFAKPMPAQE 1046 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 113/464 (24%), Positives = 203/464 (43%), Gaps = 29/464 (6%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE------ 387 G I+I I E K AE K+ +L YD +G +++ Sbjct: 348 TPFHDHNGQIAGGIAIVQDITEHKAAE----EKINNLAFYDPLTGLPNRRLLLDRLQHAL 403 Query: 388 ---SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 + + + A+ I L +A+ G D + ++R++ QR+A + I D Sbjct: 404 ASSARSGREGALLFIDLDNFKALNDTLGHDMGDLLLRQVAQRLASCVREGDSIARLGGDE 463 Query: 445 YLLLCRE----------NVQTFTRKIAMVNDFDSSFGYRNLRI--HKSAICEPLQGENAW 492 ++++ + + KI + R A Sbjct: 464 FVVMLEDLGGHDLEAAAQTEAVGEKILAMLGLPYQLVAHEYRCTPSIGATLFSGHELAKE 523 Query: 493 SYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVD 552 ++ +A+ + + F D + + + + + A++ + L YQ VD Sbjct: 524 ELLKRADIAMYQAKQAGRNTVRFFDQQMQDAVTARVALEGELHKALDRQQFRLHYQIQVD 583 Query: 553 INTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRA 612 + LGAEAL RW+ ERG++ P +FI +AE+ I +G ++ TA + + + Q A Sbjct: 584 -ASGRPLGAEALIRWMHPERGLVPPDQFIGMAEETDLILPIGQWVMDTACAQLKTWQQHA 642 Query: 613 SLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNI 672 + D +L +NVS Q ++ F + ++ + + L +E+TE+++ E + Sbjct: 643 PTR-DLVLAVNVSATQFHQLDFVFQVRATVQRHAIDPKLLKLELTESMLLENIEDTIRTM 701 Query: 673 EQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLA 730 L++ GV+ S+DDFGTG S+L+ + D IK+D F DI + +IV I +A Sbjct: 702 NALKEIGVQFSLDDFGTGYSSLQYLKRLPLDQIKIDQSFVRDIASDSNDREIVGTIIAMA 761 Query: 731 RYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 + + VIAEGVE+E+ + L GC QGYL+ KP+P ++ Sbjct: 762 QNLYLDVIAEGVETEEQRQFLQDNGCTHFQGYLFGKPVPVEQFE 805 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 113/461 (24%), Positives = 199/461 (43%), Gaps = 24/461 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------- 385 I+A++ +G + + I + K+ E +L L YD + Sbjct: 804 IDAIRDEQGVISNFVGLFMDITQQKETE----EQLEKLAYYDPLTELPNRALFRDRLEQE 859 Query: 386 --IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + + + L + I L + V G D+ + ++ ++ RI + D Sbjct: 860 MRLSARGGKSLGLFFIDLDRFKYVNDSLGHDKGDDLLIQVAGRIKHHLRTSDTVARLGGD 919 Query: 444 LYLLLCR--ENVQTFTR-KIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAE 496 + ++ E R A+V F + + P GE+ + + Sbjct: 920 EFTVILPGIEQTNDVARIAGAIVKSLGEVFVLQGHEVFIGGSIGIAMHPDDGEDYETLTK 979 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 A+ ++ + F + + R +R A+E +L L YQP VD+ Sbjct: 980 HADTAMYRAKEEGRGTYKFFTSDMNEINGRRLSLERALRQAVECNQLTLHYQPKVDVKQC 1039 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 I G EAL RW E+G++SP+ FI IAE+ G I +G +++ A + + ++ S + Sbjct: 1040 RITGMEALVRWNHPEQGLVSPVDFIPIAEETGLIITIGEWVMQQACMDAKRLAR--SSRH 1097 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + IN+S Q + + ++++GL L VEITE++ I +LR Sbjct: 1098 PLQVAINLSAKQFQDALLVAKLERSLQQSGLAPELLEVEITESLAMGDVNRTIEQIGELR 1157 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD--IFGTAGKIVRIIFDLARYNR 734 GV++SIDDFGTG S+L ++ +++K+D F D + IV I +A Sbjct: 1158 ALGVKVSIDDFGTGYSSLSYLKKLPLNALKIDKSFIQDLYLDSDDTAIVSSILSMASALG 1217 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 + V+AEGVE++ L + C QGY + KP+PF A++K Sbjct: 1218 LSVVAEGVENQAQIHFLCEKECPTIQGYFFSKPLPFEAFEK 1258 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 105/466 (22%), Positives = 198/466 (42%), Gaps = 30/466 (6%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--- 388 I A+ G I N I E K AE ++ +L +DQ +G +++ Sbjct: 362 SISAVVGTNGRVSHYIGTHNDITERKKAE----ERINALAFFDQLTGLPNRTLLLDRLKQ 417 Query: 389 ------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 ++ + A+ I L + + G D +++++++ R+ + Sbjct: 418 TILSSGRSDSHGALLFIDLDNFKTLNDTLGHDVGDQLLKQVALRLTHCVRDGDTVARLGG 477 Query: 443 DLYLLLCR----------ENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICEPLQG--EN 490 D ++++ ++ +T KI + G+ S +G Sbjct: 478 DEFVVVLANLNTNDKEAAQDTETVAEKILATLNQTYQLGHVTHHSSASIGATLFKGPLIP 537 Query: 491 AWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPI 550 ++ L++ + + F D + ++ + ++ A+ + L YQ Sbjct: 538 IDDLMKQADLSMYKAKAAGRNAVRFFDPSMEIAVKVRAEMEDDLLRALAEKQFLLHYQAQ 597 Query: 551 VDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQ 610 + + GAE L RW +RG++SP +FI +AE+ G I LG+ +++TA + ++ Sbjct: 598 --MVGERLTGAEVLLRWQHPQRGMVSPAEFIPLAEETGLILPLGHWVLETACTQLAQWAG 655 Query: 611 RASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYL 670 R L +NVS Q + F ++ ++++ G L +E+TE+++ E Sbjct: 656 R-PEVAHLTLAVNVSAHQFRQNDFVDQVLGVLEKTGANPQRLKLELTESLLVENVEDIID 714 Query: 671 NIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFD 728 + L+ +GV S+DDFGTG S+L + D +K+D F D+ + I R I Sbjct: 715 KMAALKHRGVGFSLDDFGTGYSSLSYLKRLPLDHLKIDQSFVRDVLTDSNDASIARTIVA 774 Query: 729 LARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 LA + VIAEGVE+E L GC QGY + +P+P ++ Sbjct: 775 LANSLGLGVIAEGVETEAQRDFLASSGCHTYQGYYFSRPLPIEDFE 820 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 123/470 (26%), Positives = 214/470 (45%), Gaps = 27/470 (5%) Query: 328 DSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE 387 D + I A+K R G+ I I + K+++ ++ L YD +G + + Sbjct: 240 DVSVTISAMKDRAGNIIGASKIVRDITQRKESQ----ERIEYLAHYDSLTGLPNRTLLSD 295 Query: 388 S------NNNQY---LAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIV 438 N +Y LA+ + + + V G + +K+++ + QR+ Q + Sbjct: 296 RLRIAIENARRYSIRLALLFVDIDRFKLVNDSLGHEIGDKLLKAVAQRMQSTVRQADTVS 355 Query: 439 TFNADLYLLLCR--ENVQTFTR-KIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENA 491 D +++L E R ++ + + P G++A Sbjct: 356 RVGGDEFVVLLSRIETATDAARSAEKLITSISQPYQIEEHELLLTASIGISIYPDNGKDA 415 Query: 492 WSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIV 551 S A+ S + + + F + E + + ++R A+ E+F +YQP + Sbjct: 416 SSLTRNADAAMYSAKGQGRNRYQFYSEDLTYAAAERLRLEHDLRGALSRDEIFPLYQPQI 475 Query: 552 DINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQR 611 ++ T ++G EAL RW A +G+ISP FI +AED G I LG I++ A + R + + Sbjct: 476 ELATGRVIGVEALMRWNRAGQGLISPASFIPVAEDSGLILALGEYILRKACLQARQWHEH 535 Query: 612 ASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLN 671 + + +NVS Q + F + ++ E G L +E+TE+V+ + E Sbjct: 536 QGFQG--TIAVNVSAVQFRQNDFTDVVLRVLSETGFPPECLELEVTESVVMQGLESVVQK 593 Query: 672 IEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDL 729 + L G++++IDDFGTG S+L + D +K+D F D+ G A I+R I + Sbjct: 594 MGILESHGIKLAIDDFGTGYSSLSYLRQFAIDRLKIDQSFVRDLPGDADAQAIIRAIVAM 653 Query: 730 ARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM---PFSAWDKS 776 R + V+AEGVE+E AR L + C ++QGYLY +PM F AW K+ Sbjct: 654 GRSLGLRVMAEGVETEAQARFLQDIECTESQGYLYARPMKSNDFEAWLKT 703 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 614 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 105/462 (22%), Positives = 204/462 (44%), Gaps = 24/462 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--- 388 + + G+ + I+I N I E K++ ++ L +D +G + + + Sbjct: 324 SVTQVTNSRGEPEHYIAIFNDITEHKNSRA----QIEFLAHHDALTGLPNRILLNDRLEM 379 Query: 389 ------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + L + I L + V G ++I+++ +R+ + Sbjct: 380 AITQVRRQGEKLGILFIDLDRFKNVNDSLGHGVGDQILQEAAKRLTANVRTGDTVSRLGG 439 Query: 443 DLYLLL---CRENVQTFTRKIAMVNDFDSSFGYRNLRIHK----SAICEPLQGENAWSYA 495 D +++L R I + + + +H P GE+ + Sbjct: 440 DEFVVLFPRVRTEGNLADLTIKLREQLQLPYTVDGISLHITPSIGIAVYPDDGEDPNTLI 499 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 + A+ ++ + + F + + + + ++R A++ G+ L YQP + ++ Sbjct: 500 KNADAAMYLAKEKGRNNYQFYTPTLNAKTLDRLKLESDLRSAIDAGDFELHYQPQIIGSS 559 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 + G EAL RW ERG+ISP +FI +AE+ G I LG ++ A+ + + ++ Sbjct: 560 GQLWGLEALIRWRHRERGLISPAEFIPLAEETGLIVGLGDWVLVQAVKQLAEWRRQG--H 617 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 + ++ +N+S Q + F +R I++E L +++ +E+TET++ + + ++ L Sbjct: 618 NHLVVSVNISALQFRQGDFLDRVKHILQEAQLVPDAIELELTETMLMQDVQSAIQTLKGL 677 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYN 733 R+ G RI+IDDFGTG S+L + + +K+D F ++ IV I LA+ Sbjct: 678 RELGFRIAIDDFGTGFSSLNYLRHLPINVLKIDQSFVREMLQEPESLAIVESIIALAQAL 737 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 IAEGVE+ L GC QGY + +PMP +D+ Sbjct: 738 GKETIAEGVETRAEFDVLQARGCRLMQGYFFARPMPPVIFDQ 779 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 614 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 115/457 (25%), Positives = 193/457 (42%), Gaps = 24/457 (5%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES----- 388 E + EG + I E D + N+L L ++D +G + Sbjct: 406 ELVYDDEGKPLLLRGTAQDITERHDYQ----NRLRHLANFDPVTGLPNRTLFKDRLQHAL 461 Query: 389 ----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 N + +A+ + + + V G ++++R+ +R+ + + F D Sbjct: 462 ANATRNQRLVALLFLDMDQFKNVNDSLGHMMGDELLRQTAERLLGCVREGDTVARFGGDE 521 Query: 445 YLLLCRE---NVQTFTRKIAMVNDFDSSFGYRNLR----IHKSAICEPLQGENAWSYAEK 497 +++L + Q +V F + P E+ Sbjct: 522 FIILLENIEHSEQASLSAERVVQAMRRPFRLGEHEHFCNVSIGISLYPEDDEHPEDLVRH 581 Query: 498 LKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 A+ + + + F E + + + A+E+G+ + YQP +D+ + Sbjct: 582 ADSAMYLAKAQGGAGYRFYTPDMNTRAMERLLLQNQLHQALELGQFQVHYQPQMDLRSGR 641 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 I G EAL RW ERG++ P +FI +AED G I LG +++TA E R + R Sbjct: 642 ICGVEALVRWQHPERGLVPPAEFIPMAEDTGLIEPLGEWVLRTAAREVRGWQDRGL--PA 699 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK 677 L +N+SP Q P ++ E+GL+A L +EITE +I EH + ++ + Sbjct: 700 LNLSVNLSPRQFRHPDLPGMVERVLAESGLEAERLELEITERLIIVDLEHTVDTLSRIAR 759 Query: 678 QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRI 735 GVR+SIDDFGTG S+L + ++K+D +F I I + L R R+ Sbjct: 760 LGVRVSIDDFGTGHSSLAYLKRLPVHALKIDREFVDGIGQDSDDAAIAEAVIALGRTLRL 819 Query: 736 PVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 VIAEGVE+ + A L + GC QG+ +PMP Sbjct: 820 QVIAEGVETREQASFLREHGCDAVQGFFIARPMPAGE 856 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 614 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 111/460 (24%), Positives = 193/460 (41%), Gaps = 28/460 (6%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES----- 388 A+ R G+A E+ + I+E K E +L L ++D+ +G + Sbjct: 241 HAVVRRPGEAPELYGLDIDISERKINE----EQLEYLATHDELTGLANRALFHDRLEQSL 296 Query: 389 ----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 + + +AV ++ L + + G ++++ + QR+ + D Sbjct: 297 HYAKRSGRIVAVLLLDLDRFKIINDSLGHSFGDRLLSAVAQRLDRVVRDTDTVARLGGDE 356 Query: 445 YLLLC-----RENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYA 495 ++LL ++V +I +++ I P + + Sbjct: 357 FVLLLAEVTEPDDVGLLASRI--LHELAVPHRIEGREIVMSASLGISLYPKDSGDGSTLI 414 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 +A+ + F F E + I +R A+E GE L YQP VD+ + Sbjct: 415 RNADIAMYRAKQEGGGVFSFYAPEMNQRAMETMEIESALRLALERGEFTLYYQPKVDLAS 474 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 I G EAL RW+ RG+++P FI +AE+ G I +G ++K A + R + Sbjct: 475 GRISGCEALIRWLHPRRGVVAPADFIPLAEETGLIVPIGTWVLKEACRQVRAWQAEGVPI 534 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 + + +N+S Q ++ E GL + L +E+TE+++ + +E+L Sbjct: 535 AN--VAVNLSARQFRTGDLPGLVREVLGETGLDPHLLELEMTESMVMADHAQVVAVMEEL 592 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYN 733 GVR+S+DDFGTG S+ + +K+D F I I I +A Sbjct: 593 TAIGVRLSLDDFGTGYSSFAHLSHFPINHLKIDRSFIKQIVTDPNSATIATSIIAMAHRM 652 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 R+ IAEGVE+E L K GC + QGYL +P+P S + Sbjct: 653 RLKAIAEGVETEAQLAYLRKQGCDEIQGYLLSRPLPASEY 692 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 614 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 118/489 (24%), Positives = 215/489 (43%), Gaps = 35/489 (7%) Query: 310 RRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLS 369 RR+ E+ T+ + I++ E ++ + + I+++K +E +L Sbjct: 308 RRKNGEIYPQWLTINAVC-----IDSSCCDESNSCNYVGVFTDISQIKQSEA----QLAQ 358 Query: 370 LISYDQESGFIKNMAI---------IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIV 420 L YD +G + + + + V I L + V G ++++ Sbjct: 359 LAHYDPLTGLPNRLLAQSQLHQAIERAQRHGRLVGVLYIDLDRFKNVNDSLGHPVGDELL 418 Query: 421 RKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTR----KIAMVNDFDSSFGY-RNL 475 KL +R+ ++ + + D +LL+ E+V+ +++N S F Sbjct: 419 IKLAERMKKRVREEDTLARLGGDEFLLVL-EDVRDLGDPAFVAQSLINLLTSPFVLPSGH 477 Query: 476 RI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIA 531 I P NA + +A+ + + + + +A E + + Sbjct: 478 EIFINASIGISLFPEDASNATELIQHSDMAMYQAKKEGRNTYRYHTEALSVAANERLIME 537 Query: 532 RNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFIN 591 +R+A+ EL L YQP+VD T ++G EAL RW + ++ P KFI IAE+ G I Sbjct: 538 NRLRYALSAEELILHYQPLVDARTGYVVGVEALVRWQPPGKAMVPPGKFIPIAEETGLIV 597 Query: 592 ELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANS 651 LG +++TA + R + ++ +N+S Q + I++E L A+ Sbjct: 598 PLGEWVLRTACKQARAWIDAGL--SPLVMAVNLSVRQFQSENLVGMVQRILEETQLPADY 655 Query: 652 LCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQF 711 L +E+TE++ E + +L+ GV ++IDDFGTG S+L D +K+D +F Sbjct: 656 LELELTESMFMEHVEQSIETLNKLKTLGVHLAIDDFGTGYSSLIYLKRFPIDKLKIDQRF 715 Query: 712 TGDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 D+ +I I +AR ++ V+AEG+ESE+ L + C QGYL+ +P+P Sbjct: 716 VRDLADDHNDREIAATIIAMARGLKLGVLAEGIESEEQLAFLRQQDCDYYQGYLFHRPVP 775 Query: 770 F---SAWDK 775 AW + Sbjct: 776 AIELEAWLR 784 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 614 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 109/457 (23%), Positives = 198/457 (43%), Gaps = 28/457 (6%) Query: 335 ALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES------ 388 A++ E + I I K+AE +L S+D +G + Sbjct: 376 AVRNSEDKITNYVGISRDITLRKEAE----ERLSYQASHDALTGLPNRARFHDRLTHALA 431 Query: 389 ---NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLY 445 + A+ + L + + G + +++ + +R+ + + + D + Sbjct: 432 RAGRDRHEFAILFLDLDRFKVINDTLGHTVGDFLLQGVTKRLLGGTRESDTLARWGGDEF 491 Query: 446 LLLCR-----ENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAE 496 ++L E+ R+I ++ F + + P GE+ + Sbjct: 492 IILLESIRGAEDAAVAARRI--LDVLAEPFSVQGHEVFVSGSIGISVYPRDGEDVQALLR 549 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 +A+ +D +++ F + E + + ++R+A++ E L YQP V+INT Sbjct: 550 CADIAMYRAKDSGKNDYQFYESTMSTGGLERLKLEGDLRYALKRNEFVLHYQPRVNINTG 609 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 I+GAEAL RW +RG++ PL FI +AE+ GFI +G +++TA + R + Sbjct: 610 LIVGAEALIRWDLPDRGLLWPLDFIPLAEESGFIIPIGEWVLRTACLQCRKWQDAGVPHP 669 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +N+S Q + + I+KE GL L +EITE+ + E ++ L Sbjct: 670 --RVSVNLSTHQFKKDNLTSTVDRILKETGLSPGLLELEITESAMMENLEKAVATLQGLA 727 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNR 734 + GV ++IDDFGTG S+L ++K+D F I I I L + Sbjct: 728 ELGVNVAIDDFGTGYSSLGYLKRFPIGALKIDQSFVRHIPSNIDDTAIAMSIISLGKTLN 787 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFS 771 + V+AEGVE+++ L C +AQGYL+ +P+ Sbjct: 788 LKVVAEGVETQEQLTVLRNYQCDEAQGYLFSQPVDAD 824 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 614 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 107/472 (22%), Positives = 197/472 (41%), Gaps = 25/472 (5%) Query: 316 MTELVNTLAFLPDSTDQIEA-LKIREGDAKEIIS-IKNSIAEMKDAEIERSNKLLSLISY 373 ++E + L ++E ++ R + +E + + I + + + ++ + Y Sbjct: 277 VSERLRIQRQLAGMHGELEQQVRDRTRELQETVGNLHREIQDRQRDQ----ERIYWMAHY 332 Query: 374 DQESGFIKNMAIIE---------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLC 424 D + + + E + LAV + L + V G + ++ ++ Sbjct: 333 DALTELPNRVLLAERGQDAIRQAQESGAPLAVMFLDLDNFKHVNDSLGHRIGDALLVEIA 392 Query: 425 QRIAEKYAQCCDIVTFNADLYLLLCR----ENVQTFTRKIAMVNDFDSSFGYRNLRI--H 478 QR+ Q + D ++LL + K+ + L + Sbjct: 393 QRLRTTVRQRDTVARLGGDEFVLLLPGANAQGAARVAAKMQEAALQPVHIQHHELSLALS 452 Query: 479 KSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAM 538 P G + + + A+ + + F F + + + +R A+ Sbjct: 453 MGIALFPEHGSDFETLIQSADTAMYRAKADGRNSFRFFTPTMQAQSARALQLTNALRRAL 512 Query: 539 EIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQII 598 E +L L YQP V I T + G EAL RW E G +SP +FI +AED G I +G ++ Sbjct: 513 ERNQLSLHYQPQVSIATGRVCGVEALLRWHHPELGAVSPAEFIPVAEDTGQILPIGEWVL 572 Query: 599 KTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITE 658 +TA+ + R + + + +N+S Q +P E ++ E G++ + L +E+TE Sbjct: 573 RTALAQLRTWHSQGL--PALTMAVNLSAVQFRQPQLLELVDRLLAEYGVQPHLLELELTE 630 Query: 659 TVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--F 716 V ++QL +GVR+S+DDFGTG S+L +K+D F D+ Sbjct: 631 NVAVADPHAAIATMDQLHAKGVRLSMDDFGTGYSSLSHLKRFQIYRLKIDQSFVRDLDHD 690 Query: 717 GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 G IV I +A+ + AEGVE+ L + GC +AQG+ + +P+ Sbjct: 691 GNDRAIVSAIIRMAQALGMRTTAEGVETAHQLTFLREQGCDEAQGFYFSRPL 742 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 613 bits (1582), Expect = e-174, Method: Composition-based stats. Identities = 111/471 (23%), Positives = 195/471 (41%), Gaps = 33/471 (7%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKN---------MA 384 ++ G ++S+ I + K AE ++ L +D +G Sbjct: 641 TPIRDMHGHVTGLLSVSRDITDRKKAE----QQIELLAFFDALTGLPNRRLLLDRLQRAG 696 Query: 385 IIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 N + A+ I L + + G D ++++ ++ QR+ E + F D Sbjct: 697 AACQRNEKLGALLFIDLDNFKDLNDTLGHDMGDRLLVQVAQRLQECVRTSDTVARFGGDE 756 Query: 445 YLLLCRE----------NVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGEN 490 ++++ + K ++ + F + Q Sbjct: 757 FVVMLEGLDADTALAALQAEQVAEK--LLAQLNRPFEMGAQQHYSTPSIGITLFGDQRRT 814 Query: 491 AWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPI 550 ++ LA+ + + F D ++ + ++R + EL + QPI Sbjct: 815 VDELLKRADLAMYQAKAAGRNTQRFFDPDMQAQVTARSQLESDLRQGIARHELTVHLQPI 874 Query: 551 VDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQ 610 VD +T + GAEAL RW +G+ISP FI +AE+ G I LG Q+++TA + ++ Sbjct: 875 VDGST-RLCGAEALVRWRHPVKGLISPADFIPLAEETGLILPLGRQVLQTACEQLVRWAT 933 Query: 611 RASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYL 670 F + +NVS Q +P F + G L +E+TE+++ E Sbjct: 934 H-PATASFTIAVNVSARQFRQPDFVAEVLGTLAGTGANPQRLKLELTESLLLGDVEDTIC 992 Query: 671 NIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFD 728 + QL++ GV ++DDFGTG S+L + D +K+D F D+ IVR I Sbjct: 993 RMAQLKRVGVGFALDDFGTGYSSLSYLKRLPLDLVKIDQSFVRDVLTDPNDAAIVRTILA 1052 Query: 729 LARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKL 779 LA+ + V+AEGVE+ L GC QGYL+ +P+P A+++ L Sbjct: 1053 LAKSLDLQVVAEGVETAGQLSFLKLHGCEGFQGYLFGRPVPLEAFEREHDL 1103 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 613 bits (1582), Expect = e-174, Method: Composition-based stats. Identities = 107/466 (22%), Positives = 197/466 (42%), Gaps = 25/466 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------ 385 I A++ G + + I +K++E +L L +D + + Sbjct: 681 SISAVRDPHGQVTHYVGVFTDITHLKESEA----RLEFLAHHDPLTHLPNRLLFNNRLDQ 736 Query: 386 ---IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + LAV ++ L + + +G +++++ + QR+ ++ Q + Sbjct: 737 ALHQAEREGRRLAVLLLDLDRFKDINDSYGHLAGDELLKYVAQRLTQRLRQSDTLARLGG 796 Query: 443 DLYLLL---CRENVQTFTRKIAMVNDFDSSFGYRN-----LRIHKSAICEPLQGENAWSY 494 D + LL R + +++ + + + P G + Sbjct: 797 DEFALLMHDLRHDDDAARLASELLSGLSEPWRSSEGVEVSVGVSIGICIYPDHGRTPQTL 856 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 + A+ + + + D E + I +R A+ G+L L YQP VD+ Sbjct: 857 LQGADAALYRAKGDGRGVYRYYADEMTRIARERLHIEARLRRALADGQLLLHYQPQVDLR 916 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 + I+GAEAL RW E+G+I P++FI +AE G I E+G ++ A + R + Sbjct: 917 SGRIIGAEALVRWQDPEQGLIPPVRFIPVAEATGLIGEIGAWVLGEACRQARAWLDAGL- 975 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 + +NVSP Q ++ + ++ E GL L +E+TE + +++ Sbjct: 976 -PALTVAVNVSPRQFHQADLATQVMQVLVETGLPPTHLELELTEGALMEREAEALQVLQR 1034 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARY 732 LR GV ++IDDFGTG S+L D +K+D F DI +I I + Sbjct: 1035 LRGLGVGVAIDDFGTGYSSLASLKRFPIDVLKIDRSFITDIPDDPDDMEIAAAIIAMGHS 1094 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 I V+AEGVE+ + L + C + QG+L +P+P A+++ + Sbjct: 1095 LGILVLAEGVETAEQLAFLQQRNCDRYQGFLRSRPLPAQAFEQLLR 1140 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 613 bits (1582), Expect = e-174, Method: Composition-based stats. Identities = 116/473 (24%), Positives = 212/473 (44%), Gaps = 29/473 (6%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE----- 387 I A++ G E ++I + I + K AE ++ +L YD + +++ Sbjct: 666 ITAVRDENGKTTEYVAIFSDITQRKLAE----EEIRNLAFYDALTRLPNRRLLLDRLHAA 721 Query: 388 ----SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + + ++ AV + + + + G D + ++ ++ +RI + + D Sbjct: 722 LSVSARSRRFGAVLFLDMDRFKTLNDTMGHDYGDLLLIEVAERIKLCVREIDTVARLGGD 781 Query: 444 LYLLLCRE----------NVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICEPLQG--ENA 491 +++L E ++ KI ++ S +G E+ Sbjct: 782 EFVILVEEIDTRAEETSKHIAAIAEKIRSALSVPYRLKEKHHHSSPSIGVCLYRGIEEST 841 Query: 492 WSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIV 551 + +A+ +D + F D +E + + ++RHA+ +L L YQ V Sbjct: 842 DDLLKHADMAMYQAKDSGRNAVRFFDPLMQQAVEARVTLENDLRHALPNDQLQLYYQIQV 901 Query: 552 DINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQR 611 D N R +GAEAL RW+ RG++SP FI IAE+ I E+G ++KTA + ++ R Sbjct: 902 D-NDRRAIGAEALVRWIHPIRGMVSPAHFIPIAEETSLILEVGAWVLKTACLQLAVWADR 960 Query: 612 ASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLN 671 + + +L +NVS Q + F E +++ + L +E+TE+V+ Sbjct: 961 -PMTCNLILAVNVSVQQFKQVGFVEHIAELIRAYCIVPQRLKLELTESVVLNDVSDIVQK 1019 Query: 672 IEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDL 729 + L+ GVR+S+DDFGTG S+L + D +K+D F +I +V+ I + Sbjct: 1020 MCALKSLGVRLSMDDFGTGYSSLSYLKNLPLDQLKIDQSFVRNIATDENDAVMVKTIIAM 1079 Query: 730 ARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE 782 A+ R+ VIAEGVE+E L + GC+ QGY + KP P + + + + Sbjct: 1080 AQNFRLNVIAEGVETEAQLAFLKQNGCMCYQGYYFGKPAPIEQFQSQLEALSK 1132 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 613 bits (1582), Expect = e-174, Method: Composition-based stats. Identities = 107/460 (23%), Positives = 201/460 (43%), Gaps = 23/460 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--- 388 I G+ E + I N I+++K++E K+ L YD +G + +++ Sbjct: 1004 SISRGLDTSGNVTEYVGIFNDISKVKESE----EKIKHLAHYDPLTGLVNRELLMDRLNH 1059 Query: 389 ------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 NN LA+ I L + V G ++++ ++ QRI + I Sbjct: 1060 SISTADRNNTPLALLFIDLDHFKNVNDTLGHQVGDQLLIEVGQRILKILRDEDTIARQGG 1119 Query: 443 DLYLLLCRENVQTFTRKIA--MVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAE 496 D ++++ + + +A ++ + ++ P G++A S + Sbjct: 1120 DEFIVVLPDTGENGAVHVAEKILESISDQLNLKPYKLFITPSIGIAVYPQDGKDADSLLK 1179 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 A+ ++ + + F + I +R A+ + L YQP + Sbjct: 1180 NADTAMYQAKNDGRNVYRFFTMEMQAHSSRIMQIESALRVALFDQQFELYYQPQTCAKSG 1239 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 +I+G EAL RW E G +SP +FI +AE G I +G+ +++TA+ + + +S+ K Sbjct: 1240 SIIGVEALIRWNHPEMGPVSPQEFIPVAEQSGQILAIGWWVLRTAIRQIKIWSEHG--KP 1297 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +N+S Q ++ I++E G+ L +E+TE+V E +++L Sbjct: 1298 CIKVAVNLSAVQFRYEDLPKQVMKILEEEGVSPEFLELELTESVAMANPEAVIEMMDKLV 1357 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNR 734 G+++SIDDFGTG S+L +K+D F D+ I+ I L++ Sbjct: 1358 GHGIKMSIDDFGTGYSSLSYLKRFKVSKLKIDQSFIRDLAVDSDDRSIIEAIISLSKALG 1417 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 + IAEGVE++ L + C + QG+ Y K + A+D Sbjct: 1418 LKTIAEGVETQAQLDFLQEKQCDEIQGFYYSKALTPEAFD 1457 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 613 bits (1581), Expect = e-173, Method: Composition-based stats. Identities = 111/462 (24%), Positives = 204/462 (44%), Gaps = 28/462 (6%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------ 385 I A++ R+G + + N I+ K E +L L+ YD + + Sbjct: 474 AISAIRNRQGVISHFVGVFNDISRQKSTE----QQLERLVFYDPLTQLPNRVLFRDRLIH 529 Query: 386 ---IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + +N+ +++ ++ L + + G ++++ ++ +R+ + + Sbjct: 530 EVGVAERSNKLMSLLLVDLDRFKIINDTLGHGVGDELLLQVSKRLIASVRKSDTVARLGG 589 Query: 443 DLYLLLCR-----ENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICEP----LQGENAWS 493 D + ++ E+ I +N F + A G++ S Sbjct: 590 DEFAIILPGMERAEDAAHVAETI--INQLQVPFSIEENELFVGASIGIAVHGQDGDDYDS 647 Query: 494 YAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDI 553 A+ ++ + F + + + + +R A++ EL L YQP VD Sbjct: 648 LTMNADAAMFKAKESGKGTYKFFTPDMNIQNAKRLVMEAELRRAVDNQELMLHYQPKVDA 707 Query: 554 NTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRAS 613 +R I+G EAL RWV RG+I P +FI +AE+ G I LG ++ A + + + Sbjct: 708 ESRQIVGMEALVRWVHPTRGVIPPGEFIPLAEETGLIVPLGELVLTRACAQVKQWWDMGL 767 Query: 614 LKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIE 673 + +N+SP Q EP+ E+ + I+++ G A L +EITE++ ++ ++ Sbjct: 768 --PQVQVAVNLSPRQFQEPNLIEKVSEILRKTGFPATGLELEITESIAMHDVDNTIETVK 825 Query: 674 QLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLAR 731 +L+ GVRISIDDFGTG S+L + ++K+D F D+ G I+ I +A+ Sbjct: 826 KLKDLGVRISIDDFGTGYSSLSYLKKFPLHALKIDQSFVRDLGGDDDGASIISSIISMAK 885 Query: 732 YNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 + V+AEGVE+ L C Q QG+ KP+P S + Sbjct: 886 AMALGVVAEGVETAQQMEFLRGQECQQVQGFFLSKPLPPSDF 927 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 613 bits (1581), Expect = e-173, Method: Composition-based stats. Identities = 109/466 (23%), Positives = 208/466 (44%), Gaps = 29/466 (6%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---- 388 I A+K G+ ++ I K +E ++ +L +D + + + Sbjct: 547 ITAVKDAGGNVVNYVATLMDITASKASE----EEIRNLAFFDPLTRLPNRRLLQDRLQQA 602 Query: 389 -----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + + A+ I L + + G D + ++ K+ R++ + + D Sbjct: 603 LASCGRSGKSGAILFIDLDNFKNLNDTLGHDIGDLLLEKVAIRLSSCVREGDTVARIGGD 662 Query: 444 LYLLLCR----------ENVQTFTRKIAMVNDFDSSFGYRNL--RIHKSAICEPLQGENA 491 ++++ E ++ KI + G A + Sbjct: 663 EFVVMLEDLSDNILDAAEQTESVGSKILASLNVPYQLGIHTYDNSPSIGATLFNDNHNSI 722 Query: 492 WSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIV 551 ++ +A+ + + F D + + + +R A+E + L YQ V Sbjct: 723 DELLKQADIAMYQAKKAGRNTMRFFDPRMQQSLSARLALELELRKAIEKDQFQLYYQIQV 782 Query: 552 DINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQR 611 D T LGAEAL RW+ E G+++P +FI +AE+ G I +G+ +++TA + + + ++ Sbjct: 783 D-ETHRPLGAEALLRWMHPEHGLMAPAEFIPMAEETGLIVPIGWWVLETACTQLKAW-EK 840 Query: 612 ASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLN 671 L + +L INVS Q ++P F ++ + G+ L +E+TE+++ + Sbjct: 841 DPLTRNLVLSINVSAKQFHQPDFVDQVQAAVDHYGIDPALLKLELTESILLENVDTTIKR 900 Query: 672 IEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDL 729 + L+K GV S+DDFGTG S+L+ + D +K+D F +I + IV I + Sbjct: 901 MSALKKTGVGFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFMQEITSDSSDMAIVSTIIAM 960 Query: 730 ARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 A+ ++ VIAEGVE+E+ + L++ GC QGYL+ KP+P ++K Sbjct: 961 AQSMQMGVIAEGVETEEQRQLLLRKGCNHFQGYLFSKPVPVEQFEK 1006 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 612 bits (1580), Expect = e-173, Method: Composition-based stats. Identities = 98/444 (22%), Positives = 180/444 (40%), Gaps = 23/444 (5%) Query: 346 IISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAV 396 ++ N + + K+ E ++ +D +G A+ + LAV Sbjct: 572 LVGTVNDVTDQKENE----EQIERYAHFDALTGLANRHALYRRLGQAITSVHQHQHPLAV 627 Query: 397 GIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTF 456 + L + + G + ++R++ R+++ + D +LL+ + Sbjct: 628 LFVDLDKFKTINDTLGHAVGDVVLREVAGRLSDFAGPDDILARLGGDEFLLVLPGADERA 687 Query: 457 TRKIA--MVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMF 510 ++A ++ + P GE A +A+ + Sbjct: 688 ASEVAACILTAMSVPVRVDGRELPTTPTIGVSLYPRDGEEADDLIRNADIAMYQAKARGR 747 Query: 511 SEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSA 570 + F E + + +R+A GE+ L YQP +D+ ++G EAL RW Sbjct: 748 NTFQLYTPDMNAAAAERLQLQGELRNAHLRGEIMLHYQPQIDVTDGHVVGCEALMRWKHP 807 Query: 571 ERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLN 630 G++SP +FI +AE+ G I LG I+ A + + + + +N+S Q Sbjct: 808 TLGMVSPGRFIPLAEESGLIITLGNWAIREACRQAMVWQRAGL--PPLTVAVNLSGCQFQ 865 Query: 631 EPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTG 690 + +F + + L L +E+TE+++ E + +L+ GV++SIDDFGTG Sbjct: 866 QSNFTAVVADALADTSLPPQYLELELTESIVMHDVEQVIATLTELKALGVQLSIDDFGTG 925 Query: 691 LSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVA 748 S+L D +K+D F D+ IVR I L + + +IAEGVE++ Sbjct: 926 YSSLNYLKRFPVDLLKIDQGFVRDVETDPSDAAIVRAIIALGKILNLRLIAEGVETQGQL 985 Query: 749 RELIKLGCVQAQGYLYQKPMPFSA 772 L G QGY + +P+P Sbjct: 986 DYLHAAGVDFIQGYYFSRPLPAED 1009 >UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E9L8_GEOLS Length = 631 Score = 612 bits (1580), Expect = e-173, Method: Composition-based stats. Identities = 103/464 (22%), Positives = 198/464 (42%), Gaps = 25/464 (5%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES----- 388 LK +G ++ + I E + A + ++ L +D +G + + + Sbjct: 160 TPLKNHDGAISRVVLLYTDITERRAA----AEEIERLAFFDSLTGLPNRVLLKDRLAQLL 215 Query: 389 ----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 N+ +A+ I L + V G +++++ + +R+ C + D Sbjct: 216 TRAGRYNEMVAILFIDLDRFKEVNDTLGHGTGDQLLQVVSERLTACLRSCDTVARLGGDE 275 Query: 445 YLLLCRENVQTFT---RKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEK 497 +++L + ++ + P+ G++ + + Sbjct: 276 FVVLLPGITERDCVGDIAAKLLQSLCKPVQLDAREVFTSGSIGISLWPIDGDSVSTLFKN 335 Query: 498 LKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 A+ ++ + + F E + ++ ++R+A+E GEL L YQP V T Sbjct: 336 ADTAMYHAKEQGRNTYRFYTPQMHATSMEQLTLSNDLRYALERGELHLCYQPQVSFETGG 395 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 ++G EAL RW+ + G+I P +FI +AED G I +G ++ A + + + Sbjct: 396 LIGVEALLRWIHPKLGMIPPDRFIPLAEDTGLIVPIGTWVLHEACRQAMMWVAQGL--PS 453 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK 677 + +N+S Q E F + +++ GL N L +E+TE ++ L ++ L+ Sbjct: 454 LRVAVNISAKQFRESDFSDTVKAVLQTTGLAPNLLELELTEGMLIENVTQTKLTLQSLKD 513 Query: 678 QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK---IVRIIFDLARYNR 734 GV ++IDDFGTG S+L D +K+D F +I +G IV + L + Sbjct: 514 MGVTLAIDDFGTGYSSLSYLKHFPLDRLKIDKSFVKEIAEKSGDAAAIVEAVVALGHSLK 573 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 + VIAEGVE +D L C + QGY + +P+ A ++ + Sbjct: 574 LTVIAEGVEQQDQVDFLHNRKCDELQGYFFSRPLTPQALEELLR 617 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 612 bits (1579), Expect = e-173, Method: Composition-based stats. Identities = 105/461 (22%), Positives = 197/461 (42%), Gaps = 25/461 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---- 388 I + + + + I ++K +E +L L YD +G + + Sbjct: 658 ISTVFNDRNEPCNYVGVFTDITQIKQSEA----RLAHLAHYDALTGLPNRLLVQSRLHHA 713 Query: 389 -----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + +A + L + V G ++++ L R+ ++ + + D Sbjct: 714 IERTLRHGNQIAALYLDLDRFKNVNDSLGHPIGDELLVMLALRLKKRLREEDTLARLGGD 773 Query: 444 LYLLLC---RENVQTFTRKIAMVNDFDSSFGY-RNLRI----HKSAICEPLQGENAWSYA 495 +L++ +++ + +++ + F I P + Sbjct: 774 EFLVVLEDIKDSNEPAMVAQTLIDLLATPFSLPSGHEIFINTSIGISLFPTDANSVTELI 833 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 + +A+ + + + + DA E + + +R A+ GE L YQP++D Sbjct: 834 QHADMAMYLAKQEGRNTYRYHTDALSIAANERLVLETQLRQALSAGEFVLHYQPLIDARK 893 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 ++G EAL RW ++ ++SP KFI IAE+ G I LG +++TA + R + + Sbjct: 894 GQVMGVEALVRWQPPDKAMVSPGKFIPIAEETGLIVPLGEWVLRTACAQGRAWMD--ADF 951 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 ++ +N+S Q + E +++E L A L +E+TE++ E ++ L Sbjct: 952 PPLVMAVNLSVRQFQSENLVELIRQVLEETKLPAACLELELTESMFMEHAEQSIEILKTL 1011 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYN 733 + GVR+SIDDFGTG S+L D +K+D F + +I I +AR Sbjct: 1012 KSLGVRLSIDDFGTGYSSLTYLKRFPIDKLKIDQSFVHGLAYDPNDREIAATIIAMARNL 1071 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 ++ V+AEGVESE L + GC QGYL+ +P+P + Sbjct: 1072 KLDVLAEGVESEQQLDILNQHGCDYYQGYLFHRPVPAQELE 1112 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 612 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 104/461 (22%), Positives = 199/461 (43%), Gaps = 25/461 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE----- 387 I ++ G IS+K I+ K+ E +L+ +YD +G + ++ Sbjct: 457 ISPIRDNSGVITHYISVKEDISIRKEYE----ERLVRQANYDALTGLPNRILAMDRLKQA 512 Query: 388 ----SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 N+ +A+ ++ L + V G + ++++ R+ + + + D Sbjct: 513 IAQAQRYNRKVALMLLDLDDFKKVNDTLGHAAGDLLLKEAALRLVDCLREGDTVARLGGD 572 Query: 444 LYLLLCRENVQTFTRKI---AMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAE 496 ++LL + T + ++ ++ + F P + Sbjct: 573 EFVLLLPDLTDTSSAEVVAEKILAACNQPFDVGGHEAYIAGSIGIAIFPDDERDPILLMR 632 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 A+ + F + E++ + +RHA+E E+ + YQP+VD T Sbjct: 633 NADAAMYRSKREGKGVFRYFTPEMNARALEHMRMESQLRHAIERNEMKVHYQPLVDSGTG 692 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 ++GAEAL RW + G +SP +FI +AE+ G I +G +++TA + + + Sbjct: 693 RLVGAEALLRWSNPVLGEVSPEQFIPLAEETGLILSIGAWVLRTACRDAASWQR---PDH 749 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + + +N+S Q + E + + E+GL L +E+TE+V+ + I++L Sbjct: 750 EIFVAVNISGKQFQKRTLVEIVRSSLNESGLPPACLELELTESVLLEHTQETLSIIQELE 809 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNR 734 GV +IDDFGTG S++ D++K+D F D+ +V+ I +A Sbjct: 810 SLGVGFAIDDFGTGFSSISYLRRFPFDTLKIDRSFIKDLGDNEGDADLVKSIIAMANSMS 869 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 + V+ EGVE+ L GC AQG+LY +P+P + + Sbjct: 870 LKVVGEGVETHGQREFLRLSGCHIAQGWLYSRPIPGKDFQE 910 >UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Proteobacteria RepID=B1M266_METRJ Length = 960 Score = 612 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 122/482 (25%), Positives = 200/482 (41%), Gaps = 27/482 (5%) Query: 308 VFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKL 367 + R+Q + F S +I A+ RE ++ + E + AE ++ Sbjct: 473 LLRQQRDAFSNGAWQTHFQELSNGRIVAIDRREAADGGFVATYEDVTERRRAEA----RI 528 Query: 368 LSLISYDQESGFIKNMAI--------IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKI 419 + +D +G +A+ ++ +Q AV I L V G +++ Sbjct: 529 AFMAHHDMLTGLPNRVAVGQQIDVAVAQAGRDQGFAVFAIDLDDFRPVNETLGHGIGDEL 588 Query: 420 VRKLCQRIAEKYAQCCDIVTFNADLYLLLCR-----ENVQTFTRKIAMVNDFDSSFGYRN 474 + + R+ + + AD ++++ R E+ R+I V S + Sbjct: 589 LVAVANRLTACVREIDCVARLGADEFIVVQRGVDRPEDAAILARRIIEVVGAPYSLTHHT 648 Query: 475 LRI--HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIAR 532 + + P G NA + ++A+ + F F + A + + R Sbjct: 649 ISVGLTIGITLAPSDGSNADKLLKNAEVALDRGKTEARGAFRFFEPAMDARLIARRIMER 708 Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 ++R A+ + YQPI + T I G EAL RW RG +SP +FI IAE++G I Sbjct: 709 DLRDALAREAFEVYYQPIYSLETDRICGFEALLRWNHPVRGFVSPAEFIPIAEELGLIVP 768 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 LG +++ A E + D+ + +NVS Q ++ GL L Sbjct: 769 LGEWVLRRACEEAARW------PDELKVAVNVSAVQFTSASLVTAVREALRRTGLPGRRL 822 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +EITETV+ + LR GVR+++DDFGTG S+L D IK+D F Sbjct: 823 ELEITETVLVANPGATTAILHSLRALGVRVAMDDFGTGYSSLSYLRSFPFDKIKIDQSFV 882 Query: 713 GDIFGTAGK--IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPF 770 D+ G IVR + L + AEGVE+E L GC + QGYL+ +P+P Sbjct: 883 RDLCVKDGTDFIVRAVIGLGASLGMTTTAEGVETEAQLAHLRAEGCDEVQGYLFSRPVPV 942 Query: 771 SA 772 S Sbjct: 943 SE 944 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 612 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 105/473 (22%), Positives = 209/473 (44%), Gaps = 24/473 (5%) Query: 320 VNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGF 379 V+ F ++I L+ + I +AE K E +L ++D + Sbjct: 163 VHAAGFGAFDAEEIGLLEELANNLAHGILSLRIMAEHKRYE----EQLAYQATHDPLTAL 218 Query: 380 IKNMAIIE---------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEK 430 + + + +++AV + L + V G + +++++ + +R++E+ Sbjct: 219 PNRNLLADRISQALAWAQRHRRWIAVLFVDLDFFKFVNDSLGHGKGDQLLKMVAERLSER 278 Query: 431 YAQCCDIVTFNADLYLLLCRE--NVQTFTRKIAMVND-FDSSFGYRNLRI----HKSAIC 483 Q + D ++++ + + R + ++ + F + Sbjct: 279 VRQVDTLAHQGGDKFVVVLTDLRGNEEADRAVHVIREAISLPFLMDGQELVISCSIGITV 338 Query: 484 EPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGEL 543 P GE+A + + ++A+ ++ + F + + + + +++R A+E E Sbjct: 339 YPKDGEDAQTLVKNAEVAMYRAKEQGRNCFRYYTRELNERVASRMSMEKHLRKALENEEF 398 Query: 544 FLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMG 603 L YQP D+NT + G E L RW +AE G++ P FI +AE+ G I ++G +++TA Sbjct: 399 ELWYQPQADLNTGRLSGMEGLIRWRNAELGMVQPGSFIPLAEETGLIVQIGEWVVRTACL 458 Query: 604 EFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIER 663 + R + + +N+SP Q + +++E GL L +EI E+++ Sbjct: 459 QNRRWQDAGL--SPLTVAVNLSPRQFRDRELTGVIAGVLRETGLDPRYLGLEIVESMVMH 516 Query: 664 INEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGK 721 E + +L+ GV++S+DDFGTG S+L +K+D F DI + Sbjct: 517 DVESAAAMLNELKALGVKLSMDDFGTGYSSLSYLKRFPFAKLKIDLSFVRDIMTDPGSAA 576 Query: 722 IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 I + I +A + V+AEGVE+E L GC + QGY +P+P + ++ Sbjct: 577 IAKSIISMAHNLNLSVVAEGVETEGQLEFLRAHGCNEIQGYYLSRPLPAAEFE 629 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 611 bits (1577), Expect = e-173, Method: Composition-based stats. Identities = 110/470 (23%), Positives = 198/470 (42%), Gaps = 28/470 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII----- 386 + A++ +G A + I + +++++ E ER L YD + + + Sbjct: 881 AVSAVRNDQGKATHYVGISSDLSQLRQTEAERE----HLAHYDPLTDLPNRLLLRSHLTH 936 Query: 387 ----ESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 ++ + V + L + + G ++++ L +R+ + Sbjct: 937 ALAQAKRHHNQVGVLYLDLDRFKNINDSLGYQVGDELLVTLTERLTMHMRSEDLLARLGG 996 Query: 443 DLYLLLCRENVQTFTRKI---AMVNDFDSSFGYRN-----LRIHKSAICEPLQGENAWSY 494 D +LL+ + I +++ F + P G++A Sbjct: 997 DEFLLVLEHINEPEDSAIVARSLLETLAQPFVLHGEREIFIGASIGISIFPNDGDSAEQL 1056 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 + A+ + + + F + E++ + +RHA+ +L + YQP VDI Sbjct: 1057 IQHADAAMHQAKTLGRNTYHFYTEDLSRASNEHLELENRLRHAITANQLRVYYQPQVDIA 1116 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 T I+GAEAL RW ERG++ P +FI +AE+ G I +G ++K + + Sbjct: 1117 TGHIIGAEALVRWQDPERGLVQPGQFIPLAEETGLIGAIGEWVLKETCLQGMRWIDAGL- 1175 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 L +N+SP Q + + ++ E G A+ L +E+TE+ + + E + Sbjct: 1176 -PFLTLAVNLSPHQFLRGNIAGLISKVLAETGFPADRLELELTESALMQQGEDVIKMLHL 1234 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARY 732 LR Q +R++IDDFGTG S+L D +K+D F DI +I I + Sbjct: 1235 LRAQDIRLAIDDFGTGYSSLSYLKRFPLDILKIDKSFVDDIPFHQDDMEIAATIIAMGHI 1294 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE 782 V+AEGVE+ + L GC QGYL P+P ++K L+KE Sbjct: 1295 LGFKVLAEGVETREQLEFLQARGCDLYQGYLTSPPIPAEEFEK---LLKE 1341 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 611 bits (1577), Expect = e-173, Method: Composition-based stats. Identities = 111/452 (24%), Positives = 203/452 (44%), Gaps = 20/452 (4%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI---IESN 389 I + +G + I+ + I+E K E ++ L D +G M++ +E Sbjct: 396 ITTVTGEDGRVECYINTFSDISERKANEA----RIHDLAHTDTLTGLPNRMSLYSGLEER 451 Query: 390 --NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLL 447 N Q + V I+ L + + G ++++ ++ +R+ + + D +++ Sbjct: 452 LANVQPIGVMILDLDNFKIINDTLGHHVGDQLLVEVARRLVCCVGEQGMVARLGGDEFVI 511 Query: 448 L--CRENVQTFTRKIA-MVNDFDSSFGYRNLRIHKSAICE----PLQGENAWSYAEKLKL 500 + C + Q R ++ + +H S+ P G + +S + + Sbjct: 512 VLDCPQATQIVGRVAKEVLQRLAQPYLIEGYELHSSSSIGIGVSPHDGSDPYSLLKNIDT 571 Query: 501 AISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILG 560 A+ + + + F F + +I E + + ++R A+ E L YQP VD+ T I+G Sbjct: 572 AMYAAKSSGKNNFKFFTEKMREQINERMQMENHLRQAILRNEFELHYQPQVDLGTGRIIG 631 Query: 561 AEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLL 620 EAL RW E G++ P KFI +AE+ + LG ++ A + +S++ + + Sbjct: 632 MEALVRWNHPEWGMVHPEKFIRVAEECNLVIPLGEWVLCEACRQISQWSRQGL--EAVCI 689 Query: 621 HINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGV 680 +N+S QL + +M + +K L +EITE+ + E +++L+ +GV Sbjct: 690 SVNISARQLKSRYLFTLIDNLMMTHQIKPGMLELEITESAVMDDPEQTIPRMKELKNKGV 749 Query: 681 RISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVI 738 ++IDDFGTG S+L + +K+D F DI I LAR + ++ Sbjct: 750 ALAIDDFGTGYSSLSYLKLLPLTRLKIDRSFVKDIETDPNDAAICAATIALARTLGLGLV 809 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPMPF 770 AEGVE+E L GC AQGY + KP+P Sbjct: 810 AEGVETEAQLEYLRAQGCDSAQGYYFSKPLPA 841 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 611 bits (1577), Expect = e-173, Method: Composition-based stats. Identities = 120/463 (25%), Positives = 203/463 (43%), Gaps = 31/463 (6%) Query: 341 GDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII----------ESNN 390 G+ + I+ I I+E K E ++ +D +G Sbjct: 371 GETQGIVYIYQDISERKAFE----EQITHQAFHDALTGLPNRSLFADRLERALTRARRRG 426 Query: 391 NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR 450 + AV +I L + V G ++++ ++ +R++ + D + ++ Sbjct: 427 DSQYAVLMIDLNKFKGVNDTLGHQAGDQLLVEVARRLSGCVRSMDTVARLGGDEFAVILE 486 Query: 451 E-----NVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLA 501 E V T +I + F + + A +A Sbjct: 487 EFKTKKEVMTVVERIGV--GLGKPFVLCGKTVTPEASIGIVLHTRDYAAADDLLRDADIA 544 Query: 502 ISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGA 561 + ++ + + D EI E I + ++R A+E GEL L YQPIVD+ I+G Sbjct: 545 MYRAKEQGRAS-MIFDRKMHQEILEAISLETDLRQALEAGELLLHYQPIVDVKDSRIVGF 603 Query: 562 EALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLH 621 EAL RW +RG++ P +FI +AE+ G I LG +I A + R + D + Sbjct: 604 EALVRWDHPDRGLVPPGQFIPLAEETGLILPLGRFVIDEACRQLRAWQLEMPEAADLSVS 663 Query: 622 INVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVR 681 +NVS Q + E ++ GL L +EITE+V+ EH + +L+ GV+ Sbjct: 664 VNVSCRQFVKDGLVEHVAQVLAATGLPPACLKLEITESVLMHDAEHTARELNRLKALGVK 723 Query: 682 ISIDDFGTGLSNLKRFYEINPDSIKVDSQFT--GDIFGTAGKIVRIIFDLARYNRIPVIA 739 I+IDDFGTG S+L ++ D +K+D F G + +IV+ I LAR + VIA Sbjct: 724 IAIDDFGTGYSSLSYLRQLPIDHLKIDRSFISGQGCDGESQEIVKSIISLARSLGLTVIA 783 Query: 740 EGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE 782 EGVE D L C +AQG+++ +P+ +A +G+L+++ Sbjct: 784 EGVECPDQLDRLRLADCDKAQGFMFSRPVEATA---AGRLIRQ 823 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 611 bits (1576), Expect = e-173, Method: Composition-based stats. Identities = 103/442 (23%), Positives = 178/442 (40%), Gaps = 23/442 (5%) Query: 347 ISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVG 397 + I+ K AE ++ L YD +G + E +AV Sbjct: 136 VGTVLDISAQKAAE----QRIRELADYDVLTGLPNRRLLRERFEQLLAAAEREKSEIAVI 191 Query: 398 IIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR--ENVQT 455 + L + V G ++++ ++ +R+ + + D ++ Sbjct: 192 FLDLDHFKRVNDSLGHSVGDELLCEVARRLDSVVRRIDTLARLGGDEFIFAMPGFHTAAA 251 Query: 456 FTRKIAMVNDFDSSFGYRNLRIHK----SAICEPLQGENAWSYAEKLKLAISSIRDHMFS 511 +V F F + P G + + A+ ++ + Sbjct: 252 VEVARRLVEVFSRPFEVAGHELTVTPSLGISIYPHDGRDLETLLRNADTAMYRAKEMGRN 311 Query: 512 EFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAE 571 F F + + + N+R A+ E L YQP+V++ T I+G EAL RW+ E Sbjct: 312 AFQFYSSEMNTTTLDRLLMESNLRRALVQNEFILHYQPLVNLETGLIIGVEALIRWLHPE 371 Query: 572 RGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNE 631 G+I P +FI +AE+ G IN +G ++ A + + + + +NV+P Q + Sbjct: 372 LGLIMPDRFIHVAEETGLINPIGDWVLCEACRQAKAWCDAGL--PPICMAVNVAPVQFRQ 429 Query: 632 PHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGL 691 F E + +GL A+ L +E+TE + + + L + GV +S+DDFGTG Sbjct: 430 AGFVEMVAGALATSGLDASRLELELTERTVMHDADINMGTLSALHRMGVELSLDDFGTGY 489 Query: 692 SNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVAR 749 S+L +K+D F D+ I I + R R+ V+AEGVE + Sbjct: 490 SSLAYLKRFPVGKLKIDRSFVNDLETDPDDWAIASTIVSMGRSLRMTVLAEGVEKVEQLA 549 Query: 750 ELIKLGCVQAQGYLYQKPMPFS 771 L K+GC AQGY + +PM Sbjct: 550 LLRKMGCDMAQGYYFSRPMSAD 571 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 611 bits (1576), Expect = e-173, Method: Composition-based stats. Identities = 108/441 (24%), Positives = 191/441 (43%), Gaps = 28/441 (6%) Query: 348 SIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGI 398 I I E K + ++ L ++D +G + + Q +AV + Sbjct: 247 GIVQDITERK----MQQGRIEYLANHDALTGLPNRNLLSDRMEQAMSQARRTGQLVAVMV 302 Query: 399 IKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC-----RENV 453 + L + + FG + ++R + R+ + D ++++ + + Sbjct: 303 LDLDRFKHINDSFGHSVGDGLLRVVAARLKRSVRDGDTVARLGGDEFVVMLVNLATQADA 362 Query: 454 QTFTRKIAMVNDFDSSFGYRNLRIHKSAICE----PLQGENAWSYAEKLKLAISSIRDHM 509 RKI ++ F F +H + P G NA + + A+ + ++H Sbjct: 363 DVIARKI--LDTFIEPFTLDEHDLHVTTSVGVSLCPTDGTNAETLLKTADAALYAAKEHG 420 Query: 510 FSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVS 569 + + F +EE + + A+ EL L YQP VD+ T I G EAL RW Sbjct: 421 RNCYRFYTRELGARVEEQTILENALHQAVANHELELYYQPKVDLKTGQISGVEALIRWRR 480 Query: 570 AERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQL 629 G+I P +FI IAED G I +G +++TA + + + + +N+S Q Sbjct: 481 PGIGVIPPDRFIPIAEDCGLILPIGEWVLRTACMQAVAWRREG--HPPIRIAVNLSARQF 538 Query: 630 NEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGT 689 + T ++E GL +SL +E+TE+V+ + + +L+ GV +S+DDFGT Sbjct: 539 RQQDVAAMVRTTLEETGLAPDSLELELTESVLMQDCNAIAHTLRELKALGVVLSLDDFGT 598 Query: 690 GLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDV 747 G S+L ++ D +K+D F D+ +A + R I +A + +AEGVE+E Sbjct: 599 GYSSLSYLKDLPIDVVKIDRSFLDDVTTSAEGASLTRSIIAMAESLHMETVAEGVETEAQ 658 Query: 748 ARELIKLGCVQAQGYLYQKPM 768 L + C QGY + P+ Sbjct: 659 LSFLNRHRCHAMQGYYFSHPV 679 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 610 bits (1575), Expect = e-173, Method: Composition-based stats. Identities = 103/459 (22%), Positives = 190/459 (41%), Gaps = 25/459 (5%) Query: 335 ALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI--------- 385 +K GD ++II I + I E K E + +L +D + +A Sbjct: 589 PVKDENGDTQQIIYIFSDITERKLFE----EHIYNLAHHDSLTQLPNRVAFQLQMNTALE 644 Query: 386 IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLY 445 + +AV I L + + G + +++++ +R + I F D + Sbjct: 645 RAKRSKTQMAVMFIDLDHFKMINDTSGHPVGDLLLQQVAERFKRALRKEDVISRFGGDEF 704 Query: 446 LLLCRENVQTFTRKI---AMVNDFDSSFGYRNLRIHKSAICE----PLQGENAWSYAEKL 498 +L + ++ F F + + SA P G++ S Sbjct: 705 TVLLSNTRTDNATTVVARKLLACFYEPFKLPSSEVVISASIGIGVFPDNGDSVDSLMMNA 764 Query: 499 KLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAI 558 A+ ++ + F F +E + + ++R A+E E L YQP D I Sbjct: 765 DSAMYRAKEKGRNCFQFYTKEMNQYAQERLELELDLRKALERDEFVLHYQPQFD-PNGRI 823 Query: 559 LGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDF 618 +G EAL RW ++G++SP +FI +AE G I +G +I TA + + + + Sbjct: 824 IGCEALIRWQHPDKGLLSPGEFINMAEITGLIVPIGKWVIDTACMQHKMWLSQGY--PAL 881 Query: 619 LLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQ 678 + +N+S Q E + +G+ + L +E+TE+++ E + + Sbjct: 882 NISVNLSGRQFLHHDLLETVKNAITTSGITPSCLELELTESIMMVNVEETIRTLNAISSL 941 Query: 679 GVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIP 736 G+ +SIDDFGTG S++ + +K+D F + IV+ I +A + Sbjct: 942 GIHMSIDDFGTGYSSMSCLKRFPVNKLKIDQSFVRGLPQDKEDVAIVKSIIVMAHALNLT 1001 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 VIAEGVE+ + L C + QGY + +P+ + ++ Sbjct: 1002 VIAEGVETLEQLEFLKSSRCEEFQGYYFSRPILAADIEQ 1040 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 610 bits (1575), Expect = e-173, Method: Composition-based stats. Identities = 100/462 (21%), Positives = 194/462 (41%), Gaps = 24/462 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--- 388 I ++ +G + I I+E+K + ++ L +D + ++ E Sbjct: 438 SISLVRDEDGQIRNHIGSFIDISELKATQ----ERIRHLAHHDTLTNLANRFSLHEKLAQ 493 Query: 389 ------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 N LA+ +I L + + G ++++ ++ +R++ + + Sbjct: 494 ALAFCKRNRMQLALMLIDLDRFKTINDTLGHQAGDELLVQVAKRLSHAVRESDIVARLGG 553 Query: 443 DLYLLLCR---ENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYA 495 D +++ + + + + + + P G Sbjct: 554 DEFVIALPGIGSPADAAHLADDITREISAPYLIKGQELRTSPSIGICVYPGDGSEIGDLL 613 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 + +A+ + + + F + E + + ++R A+ E L YQP +D+ + Sbjct: 614 KNADVAMYHAKANGRGNYQFFTEDMNIATTERMCLESDLRLAITRREFLLHYQPQLDLRS 673 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 I+G EAL RW RG++SP FI IAE+ G I +G +++ A + + + R Sbjct: 674 GTIVGVEALIRWQHPTRGLVSPADFIPIAEESGMIAAIGDWVLEEACRQLKVWQNRGIT- 732 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 + IN+S Q + R ++ N L A+ L +E+TE++ + ++ L Sbjct: 733 -HLRMSINLSAGQFLDKTLPARIHELLAANDLSADRLDLEVTESMSMASPDESISVMKTL 791 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYN 733 G+ +SIDDFGTG S+L + ++K+D F DI I + LA Sbjct: 792 SSSGLTLSIDDFGTGYSSLAYLKLLPIHTLKIDRSFVKDIESDPNDADICDVTVLLAHKL 851 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 + V+AEGVE+E + L+ +GC + QGYL KP+P ++ Sbjct: 852 GLEVVAEGVETEAQLKFLLSIGCEKVQGYLISKPLPADQAER 893 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 610 bits (1575), Expect = e-173, Method: Composition-based stats. Identities = 107/454 (23%), Positives = 188/454 (41%), Gaps = 23/454 (5%) Query: 338 IREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNNQ----- 392 G I++ I+ ++A+ ++ L +D + + + E Q Sbjct: 527 DANGPITHSITLFRDISLQREAQ----ERIQRLAHFDPLTDLPNRVLLAERTQRQIAQEQ 582 Query: 393 ----YLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL 448 LA+ + L + V G + ++ + +R+ + D +LLL Sbjct: 583 ARGGQLALLFLDLDHFKNVNDSLGHRIGDILLVAVARRLQSLIGPQDTVSRLGGDEFLLL 642 Query: 449 CREN--VQTFTRKIAMVNDFDSSFGYRNLRIH----KSAICEPLQGENAWSYAEKLKLAI 502 A++ F + P GE+ + ++ A+ Sbjct: 643 LPATSAAHAAKVASALLTAVAQPFQIDPYELSTTLSVGIAMCPADGESFDTLYQRADAAM 702 Query: 503 SSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAE 562 S + + + F + I +R A+E + L YQP V + T ++GAE Sbjct: 703 YSAKQSGRNRYGFFTADLQARTARALQIENALRRALERQQFELHYQPQVSLGTGQVVGAE 762 Query: 563 ALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHI 622 AL RW E G+++P +FI +AE+ G I LG ++ TA + + + + + Sbjct: 763 ALLRWHHPELGVVAPAEFIPVAENSGQIVALGEWVLHTAARDAKRWLDMQLPLR--AVSV 820 Query: 623 NVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRI 682 N+S Q P E T +++ GL A L +E+TE ++QL +GVR+ Sbjct: 821 NLSAVQFRHPQLPEMVTRCLQQAGLPARRLELELTEGAAVDDPVAALAMMDQLHDRGVRL 880 Query: 683 SIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAE 740 S+DDFGTG S+L +K+D F D+ A IV I +A+ + AE Sbjct: 881 SMDDFGTGYSSLSCLKRFQIYKLKIDQSFVRDLDDDANDRAIVSAIIRMAQALGMQTTAE 940 Query: 741 GVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 GVE++ + L GC + QGYL+ +P+P A++ Sbjct: 941 GVETDGQLQFLRAQGCDEGQGYLFSRPLPADAFE 974 >UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZB1_DESAC Length = 1092 Score = 610 bits (1575), Expect = e-173, Method: Composition-based stats. Identities = 110/456 (24%), Positives = 206/456 (45%), Gaps = 27/456 (5%) Query: 342 DAKEIISI--KNSIAEMK-----DAEIERSNKLLSLISYDQESGFIKNMAIIE------- 387 DA+EI+SI + E++ +A E +L L +D + + E Sbjct: 617 DAREILSIVAARAATELERLKADEALAEHRKQLSYLAFHDPLTQLPNRLRFTEVLEAAVG 676 Query: 388 --SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLY 445 + +YL++ I L + + G +K+++ + +R + D + Sbjct: 677 DAEGHGRYLSLLFIDLDRFKNINDSLGHSIGDKLLQAVARRTGSLIDSADVLARLGGDEF 736 Query: 446 LLLCRENVQTFT---RKIAMVNDFDSSFGYRNLRIHKSAICE----PLQGENAWSYAEKL 498 +L V +++ F + +H SA P+ + Sbjct: 737 AILLFNCVTPVVGADTAQRVIDALSQPFQIDDYSLHVSASIGITVAPVDAREPDELIKCA 796 Query: 499 KLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAI 558 +A+ +D + + F + + + E + + ++RHA+ +L L YQP +D+ + I Sbjct: 797 DIAMFKAKDAGRNTYKFYERSMNLKTHELLLLENDLRHALSRDQLELYYQPQLDLQSNCI 856 Query: 559 LGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDF 618 +G EAL RW ERG++SPL+FI +AE+ G I +G I+++A + R +++ Sbjct: 857 VGFEALLRWNHPERGLVSPLEFIPLAEETGLIVSMGEWILRSACRQIRTWNEEHG--RQL 914 Query: 619 LLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQ 678 + +N+S Q + ++++ G+ L +EITE+++ + + +L+K Sbjct: 915 RVAVNISARQFHHYDLVHCVEKVLEQTGVPTEWLELEITESLLMYDIQSSIETMMRLKKL 974 Query: 679 GVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIP 736 GVR++IDDFGTG S+L + S+K+D F D+ A I LA + Sbjct: 975 GVRLAIDDFGTGYSSLSYLKKFPICSLKIDKSFVDDLLTDASDAAIAESTLALASKMDLM 1034 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 V+AEG+E ++ L + GC QGYL +P+P + Sbjct: 1035 VVAEGIEQQEQLDYLQQRGCQFGQGYLISRPLPVAQ 1070 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 610 bits (1573), Expect = e-173, Method: Composition-based stats. Identities = 133/605 (21%), Positives = 251/605 (41%), Gaps = 53/605 (8%) Query: 200 WRYLNEYLDQISANDEVLFLKQGHEIIAKNQLA-REKLIIYNSEGNYNIIDSVDTEYIEK 258 ++ D+ + N+L R+ I++ S +I E+ Sbjct: 494 ENHVTTSFDRKGKPQRFTGVMTDITQQKNNELQLRQAAIVFESTREGIVITDA-----ER 548 Query: 259 TSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLV-------VYLMTTRVFRR 311 N AL ++ F YP LL ++F+ + + RR Sbjct: 549 NIIKVNRALIDL-FGYPENELLGQRPRIFHSGKHDGHFYQQMLQALDEHGFWRGEMWNRR 607 Query: 312 QFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLI 371 Q E+ ++ ++ + DS G+ ISI I+++KD+E +L + Sbjct: 608 QNGELLPMMTSINPVCDSN----------GEILYYISIYTDISQLKDSEA----RLEHMA 653 Query: 372 SYDQESGFIKNMAIIESN---------NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRK 422 +D +G + + N+ +A+ ++ L + V FG ++++ + Sbjct: 654 LHDPLTGLPNRAMLGQKLDSALQHAMLNSTRVALLMLDLDHFKNVNDSFGHHFGDELLHQ 713 Query: 423 LCQRIAEKYAQCCDIVTFNADLYLLLC-----RENVQTFTRKIAMVNDFDSSFGYRN--- 474 + R+ ++ + + D + +L ++V +I ++ F N Sbjct: 714 VSARLKQQLRESDVVCRLGGDEFTVLLQNNPSPDDVSLLAERI--IHALHQPFLLSNARE 771 Query: 475 --LRIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIAR 532 + P G A ++ A+ + + + + + + + + + Sbjct: 772 VMIGTSIGISLYPEHGSTAEELMQQADTAMYRAKHDGRDGYRYFSEELFLKAKARLELEQ 831 Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 + A+ E + YQP + I T I+GAEAL RW E G+I P +FI++AE+ G I Sbjct: 832 RLHRAITGQEFKVFYQPQISIKTNQIIGAEALLRWDDPEYGLIPPSEFISVAEETGLIQN 891 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 +G ++ + R + + L +N+SP QL+ + TI+ +G A+ L Sbjct: 892 IGEWVLYETCRQGRDWLDQ--HLPPINLAVNLSPLQLHHGDVRQLIGTILHNSGFPAHHL 949 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +E+TE+ + E ++ LR+QG+RI+IDDFGTG S+L + D +K+D +F Sbjct: 950 ELELTESALMEQQEETVKILQGLRQQGIRIAIDDFGTGYSSLAYLKQFPLDVLKIDKRFV 1009 Query: 713 GDIFG--TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPF 770 DI +I I + R+ V+AEGVE++ L + GC QGYLY P+P Sbjct: 1010 EDIPHERDDMEIAATIVAMGHSLRLTVLAEGVETKAQLEFLEQQGCDYYQGYLYSMPLPA 1069 Query: 771 SAWDK 775 + + Sbjct: 1070 EEFAQ 1074 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 609 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 107/459 (23%), Positives = 195/459 (42%), Gaps = 25/459 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--- 388 +I + +G+ +++ I E K AE + L L S+D +G + Sbjct: 1046 EINQVIDIKGETSHFVAVFTDITERKKAEQD----LRFLASFDTLTGLPNRTLFQDRLNH 1101 Query: 389 ------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 N +A+ + L + + G + +++ +R+ + + Sbjct: 1102 AITQAHRANNIVALLFLDLDRFKHINDSMGHHVGDLLLKAAAKRLQNAVREGDTVARLGG 1161 Query: 443 DLYLLLCRENVQTFTRKI---AMVNDFDSSFGYRNLRIHKS----AICEPLQGENAWSYA 495 D + ++ +T + ++ F + F + + S P +NA S Sbjct: 1162 DEFTIILEGVAKTKAATLISEKVLRAFQTPFLLEDKSLTISTSIGISLYPNDADNADSLI 1221 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 + A+ + + F F ++ + ++ A+ EL LVYQP + Sbjct: 1222 KFADTAMYHAKSLGRNNFQFYTHKLNEIATRHVLLEAGLKQAIHRNELSLVYQPKFSLRD 1281 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 ++ G EAL RW E G ISP++FI +AE+ G IN++G+ +I A + ++ Sbjct: 1282 GSLTGLEALLRWHHTELGPISPVEFIPLAEETGIINQIGHWVINHACQQLAEWNALGF-- 1339 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 ++ + +N+S QL + +GL A SL +E+TE++I + + +L Sbjct: 1340 NNISMAVNLSARQLK-ADIISTIEVALAVSGLPAQSLELELTESMIMGNPQDSVSILSKL 1398 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYN 733 + G+ I+IDDFGTG S+L D++K+D +F DI I I LA Sbjct: 1399 KALGLTIAIDDFGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSL 1458 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 + V+AEGVE++ L GC + QG+L KP+ Sbjct: 1459 ELNVVAEGVETQAQLNFLGLQGCDEVQGFLLSKPLSAKD 1497 >UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89HX5_BRAJA Length = 799 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 111/443 (25%), Positives = 195/443 (44%), Gaps = 27/443 (6%) Query: 347 ISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--------NNNQYLAVGI 398 ++ I E +A+ K+ + +D +G + E + LAV Sbjct: 353 VATFEDITEWLEAQA----KISHMARHDALTGLPNRVLFHEQLEQGLRRTGSGDQLAVLC 408 Query: 399 IKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC---RENVQT 455 + L + + G + +++++ +R+ + + D + ++ E Sbjct: 409 LDLDHFKDINDSLGHPIGDALLKEVGRRLKATVGESDTVARLGGDEFAVVQIGRSEEAAA 468 Query: 456 FTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFS 511 +V + + + +I P G NA + LA+ + Sbjct: 469 RCLAGRLVEVISAPYEIDDHQIVIGVSIGISLSPQDGSNADELLKNADLALYRAKADGRG 528 Query: 512 EFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAE 571 + F + + + ++R A++ E YQPI D+ + ++ EAL RW + Sbjct: 529 TYRFFETGMDARAQARRLLEMDLRAALQRDEFQPYYQPIRDVASGRVVVFEALLRWNHPQ 588 Query: 572 RGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNE 631 RG+I+P+ FI +AE+ G I +LG ++++A + + DD + +N+SP Q Sbjct: 589 RGLIAPINFIPLAEETGLIVQLGEFVLRSACTDAATW------PDDVDVAVNLSPVQFRN 642 Query: 632 PHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGL 691 P+ T + +GL A L +EITE+V+ + +E + +LR GVRIS+DDFGTG Sbjct: 643 PNLIASVTAALTVSGLPARRLELEITESVLLQNSEATLTTLHELRAMGVRISLDDFGTGY 702 Query: 692 SNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVAR 749 S+L D IK+D F ++ + I+R + L R I AEGVE++ Sbjct: 703 SSLSYLRSFPFDKIKIDRSFVSELATREDSMAIIRAVTGLGRSLGIVTTAEGVENDAQLE 762 Query: 750 ELIKLGCVQAQGYLYQKPMPFSA 772 L + GC QAQGYL+ KP P S Sbjct: 763 LLRREGCTQAQGYLFSKPRPASD 785 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 609 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 100/461 (21%), Positives = 200/461 (43%), Gaps = 26/461 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE---- 387 I L G I +K I + K E +L + ++D +G + + Sbjct: 777 SISPLFDESGKIINFIGVKEDITQRKLNE----KRLEYMATHDGLTGLANRTLLYDHLEI 832 Query: 388 -----SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + + +AV ++ L + + G +++++ + QR+ + + Sbjct: 833 ALHQSQRSKKLVAVILLDLDRFKVINDSLGHLVGDQVLKAVGQRLKQYVRSTDTVARLGG 892 Query: 443 DLYLLLCRENVQTFTR-KIA--MVNDFDSSFGYRNLRIHKSAICEP----LQGENAWSYA 495 D +++L + T KIA ++ + F ++ SA + Sbjct: 893 DEFVVLLTDVRDTTAAGKIAHNLLRKLNEPFFLHGRELYVSASFGICLSETDNVDGTILL 952 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 +A+ + + F + + + + ++R A+E E L YQP V+ T Sbjct: 953 RNADIAMYKAKAEGCGLY-FYSHEMNEHLIKTLEMENSLRQALEKNEFQLYYQPKVEHAT 1011 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 I+G EAL RW +RG+I P +FI +AE+ G I ++G+ ++ A + + + Sbjct: 1012 GRIIGCEALLRWRHPQRGMIPPSEFIPLAEETGLIVQIGHWVLAEACRQSKIWETEGL-- 1069 Query: 616 DDFLLHINVSPWQLNE-PHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 + +N+S Q + + + + ++ + L + L +E+TE+++ + + + + Sbjct: 1070 PPLTMAVNISARQFYQGENLIQAVKSTLERSQLVPSQLELELTESMVMKDAVNAERTMRK 1129 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARY 732 +++ GV +S+DDFGTG S+L DS+K+D F DI + I+ I +A Sbjct: 1130 IKQLGVSLSLDDFGTGYSSLNYLRSFPVDSLKIDRSFILDIASDASSAAILNSIIAIAHT 1189 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 + +AEGVE+ D + GC QGYL+ +P+P + Sbjct: 1190 LGLQTVAEGVENNDQLALVANCGCNYIQGYLFSRPLPPEDF 1230 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 608 bits (1569), Expect = e-172, Method: Composition-based stats. Identities = 112/461 (24%), Positives = 195/461 (42%), Gaps = 23/461 (4%) Query: 331 DQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI----- 385 + A K+R D I+SI I E K AE ++ L +DQ +G + Sbjct: 575 GLMSAEKVRFKDVDCILSITRDITEKKLAEA----QIQQLAHFDQLTGLPNRSQLHDRFR 630 Query: 386 ----IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFN 441 + + LA+ + L + + G ++++ + +R+ + + Sbjct: 631 YALSLAQRHGDQLAIMFLDLDHFKNINDTLGHSVGDQLLVDVSRRLKAALREEDSLSRLG 690 Query: 442 ADLYLLLCRENVQTFTRKIA--MVNDFDSSFGYRNLR----IHKSAICEPLQGENAWSYA 495 D ++LL + ++A ++ + P G++ + + Sbjct: 691 GDEFILLLPGTDEAQASQVATKLLAAVAQPCQIEQNELVSTVSIGIALYPNDGQDFETLS 750 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 + A+ ++ ++F F + + +RHA+ E L +QP V + Sbjct: 751 KNADAAMYRVKQASRNDFRFFTQEMQTHSARTLQLVNALRHALPRHEFELHFQPQVALQD 810 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 I+GAEAL RW E G+ISP +FI IAED G I +G +++TA+ + + + Sbjct: 811 GHIVGAEALLRWRHPELGMISPAEFIPIAEDSGQILAIGEWVLRTAVRQLKQWLDAGL-- 868 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 ++ +N+S Q P+ T I+ E L L +E+TE + +L Sbjct: 869 RPMVIAVNLSAVQFRHPNLMALVTRILDEAALPPEFLELELTEAAAMDDPPAAIAIMNKL 928 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYN 733 + G+R+SIDDFGTG S+L + + +K+D F DI IV I +LA Sbjct: 929 DEHGIRMSIDDFGTGYSSLSYLKKFKVNKLKIDQSFVRDISDDPDDKAIVTAIINLASSL 988 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 + IAEGVE+ L GC + QGY KP+P ++ Sbjct: 989 GMHTIAEGVETASQLAFLRLQGCDEVQGYYVSKPLPKDQFE 1029 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 608 bits (1569), Expect = e-172, Method: Composition-based stats. Identities = 111/461 (24%), Positives = 207/461 (44%), Gaps = 28/461 (6%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE----- 387 + A+ EG + + I+E+K ++ ++L L++ D +G + E Sbjct: 519 LTAVNNEEGKVINYVGVFADISEIKHSQ----SRLNELVNRDPLTGLPNRRLMHELLDHA 574 Query: 388 ----SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 +A+ + L +A+ G +K++ ++ QRI + D Sbjct: 575 IKYAEREQNEIALLFVDLDRFKAINDTLGHQMGDKLLFEVSQRIRAAVRDSDAVARLGGD 634 Query: 444 LYLLLC-----RENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAIC----EPLQGENAWSY 494 ++++ RE+ +KI ++ + F + SA P + Sbjct: 635 EFIVMMDVLREREDAAKVAKKI--ISSLQNEFLIDGRELFISASVGISVYPDDSLDVDGL 692 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 + +A+ +++ + F E + +R A+ + + YQ V + Sbjct: 693 IKAADIAMYQVKNKGKNNHCFYSADLSQNAVERFTLENQLRRALARDQFEVYYQAQVSLE 752 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 T I+GAE+L RW+ E G++SP KFI +AE+ G I +G +++ + + + + + Sbjct: 753 TGRIIGAESLIRWIHPELGVVSPAKFIPLAEETGLIIPIGEWVLRQSAMQVKEWHDQGFD 812 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 D + +NVS Q+ +F + I+ E +++ L +EITE+ + E+ ++ Sbjct: 813 ID--WVSVNVSGVQIQRSNFADTVYGILVETDCESHLLELEITESTVMHNTEYVIDVFDR 870 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARY 732 ++ GVR++IDDFGTG S+L + D IK+D F D+ + I I +A+ Sbjct: 871 IKHLGVRLAIDDFGTGYSSLSHLKRLPLDKIKIDQSFVRDLPNNSDDAAIATAINAMAQS 930 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 VIAEGVE+ A L K+GC Q QGYLY +P+ S + Sbjct: 931 LGFTVIAEGVETRQQASFLKKIGCQQGQGYLYSRPVTASEF 971 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 608 bits (1569), Expect = e-172, Method: Composition-based stats. Identities = 105/459 (22%), Positives = 196/459 (42%), Gaps = 24/459 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------ 385 ++ A + + + ++ I K E E L ++D +G + + Sbjct: 299 EVSASQCLFNNEENHVAFVRDITIRKKYEKE----LEHQSNHDALTGLANRVLLDDRIQQ 354 Query: 386 ---IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + AV ++ L + + G + + ++ + +R++ + + Sbjct: 355 AIVHAERAQRNTAVFLLDLDRFKVINDSLGHSQGDAVLLAVAERLSACISPGDTLSRLGG 414 Query: 443 DLYLLLC-----RENVQTFTRKIAMVNDFDSSFGYRNLRI--HKSAICEPLQGENAWSYA 495 D + ++ + + +KI + G R LRI A P GE + Sbjct: 415 DEFAIVMTHVNHPADARIMAQKILNAFEQPFPLGNRELRITTSIGASLYPRDGEQSEDLL 474 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 A+ + + F FC + + + + ++R A+++G L YQP V I + Sbjct: 475 RHADAAMYQAKKQGGNGFQFCSEEMDTRAHKALELEGDLRQALQLGSFVLHYQPKVKIAS 534 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 I G EAL RW ++G+ISP FI +AE+ G I LG +++ A +F+ + + Sbjct: 535 GKIDGCEALVRWNHPDKGMISPDDFIPLAEETGLIIALGEWVLREACRQFKAWQAQGL-- 592 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 + +N+S Q + F E TI+ E + + L +E+TE+++ + + +L Sbjct: 593 PPIKIAVNLSARQFLQSDFVESIQTILHEFDIDPHWLDLELTESMVMEDPDRIAKLLAEL 652 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYN 733 ++ G +S+DDFGTG S+L D +K+D F D+ A + + +A Sbjct: 653 KQIGFALSLDDFGTGYSSLNYLRRFPIDCLKIDRSFILDVASDATAASVANSVIGIAHSL 712 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 I IAEGVE+ + L C QGYL+ KP+P + Sbjct: 713 GIHAIAEGVETREQYAFLAMCECDSIQGYLFSKPLPAND 751 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 608 bits (1568), Expect = e-172, Method: Composition-based stats. Identities = 116/456 (25%), Positives = 198/456 (43%), Gaps = 28/456 (6%) Query: 339 REGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------N 389 G+ + + ++ I E++ + L +YD +G + E Sbjct: 361 HGGEPRYFVGVQKDITEIRQYQ----EALERQANYDTLTGLANRNLLKERMQQAISEARR 416 Query: 390 NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC 449 +N +V I + + V G ++++R L QR+ + D ++LL Sbjct: 417 HNWTFSVAFIDIDNFKRVNDSMGHSAGDELIRLLGQRLQSCLRDGDTVARLGGDEFVLLL 476 Query: 450 R-----ENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICE----PLQGENAWSYAEKLKL 500 E++ T ++I N + F ++ + P G NA + Sbjct: 477 TSQSLDESIHTVVQRIR--NTIINPFIITGRQLTVTCSIGLANFPHDGRNADTLLSNADS 534 Query: 501 AISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILG 560 A+ + + F F E+ + + ++ HA+E +L L YQP V + I+G Sbjct: 535 AMYQAKASGSNNFRFYAKEMNAELGHRLSLENDLWHALENQQLVLHYQPQVCMRNSQIIG 594 Query: 561 AEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLL 620 EAL RW + G+I PL+FI ++ED G I +G +++TA + R + Sbjct: 595 MEALIRWQHPKLGMIPPLQFIPLSEDDGLIVPIGIWVMETAAHQNRQLQLAGY--PPIRV 652 Query: 621 HINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGV 680 +N+S QL + ++ +GL L +EITE+++ E + + ++ GV Sbjct: 653 AVNLSVRQLEQKDLVHCIEKTLQHSGLDPQCLELEITESMLMHNIEESIITLNRISDLGV 712 Query: 681 RISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNRIPVI 738 ++S+DDFGTG S+L + + +K+D F DI I R I LA I VI Sbjct: 713 QLSLDDFGTGYSSLSYLKRLPINRLKIDKSFINDITTTYNDAIIARSIIALAHSLEIQVI 772 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 AEGVES D L++ GC + QGYL +P PF + Sbjct: 773 AEGVESADQYAFLLENGCDEVQGYLLSRPRPFEEME 808 >UniRef50_Q0AAU4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU4_ALHEH Length = 723 Score = 607 bits (1567), Expect = e-172, Method: Composition-based stats. Identities = 111/450 (24%), Positives = 194/450 (43%), Gaps = 29/450 (6%) Query: 339 REGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI---------IESN 389 G I + + K AE +D +G + Sbjct: 262 HPGQFLGTYGIARDVTDRKHAESIVH----YQAHHDLLTGLPNRALLKDRLAQALARARR 317 Query: 390 NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC 449 N+ +AV + L + V G +++++++ QR+ + + D + LL Sbjct: 318 GNEEVAVLFLDLDRFKVVNDSLGHSVGDQLLQQVAQRLRACLREGDTLARLGGDEFTLLL 377 Query: 450 -----RENVQTFTRKIAMVNDFDSSFGYRNLR----IHKSAICEPLQGENAWSYAEKLKL 500 R V+ +K ++ + F N R + P GE + + + Sbjct: 378 PAIPDRPAVERVAQKC--IDALEQPFMVHNHRLFLGVSIGIALFPEHGETLETLIKHADV 435 Query: 501 AISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILG 560 A+ +++H + F D A + I+ ++ + +R A+E E + YQP VD+ + + G Sbjct: 436 AMYHVKEHGKGHYTFFDQAMGSRIDHHLNMETGLRRALEQHEFRVAYQPQVDVVSGRVTG 495 Query: 561 AEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLL 620 EAL RW E G +SP +FI +AE G I +G ++++A E + + L Sbjct: 496 MEALIRWQHPETGEVSPREFIPVAEQTGLILPIGEWLLRSACEELLRWPD---GNEGLRL 552 Query: 621 HINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGV 680 +N+SP Q+++ F +R I E G L +EITE ++ R E + L + GV Sbjct: 553 AVNLSPLQVHQRDFVDRVRAICDETGFPLRRLDLEITENLLMRDVESVVEKLRTLSRLGV 612 Query: 681 RISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIPVI 738 I+IDDFGTG S+L + ++K+D F I K +V I +A + V+ Sbjct: 613 TITIDDFGTGYSSLGYLQRLPIHALKIDQSFVHAIRENEEKGTLVETIIAMAHGLGLNVV 672 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPM 768 AEGVE++ L +L C + QG+ + P+ Sbjct: 673 AEGVETKRQLDYLRRLQCGRMQGFYFSYPL 702 >UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K569_AZOSB Length = 947 Score = 607 bits (1567), Expect = e-172, Method: Composition-based stats. Identities = 117/459 (25%), Positives = 199/459 (43%), Gaps = 24/459 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE---- 387 + A+ G A + ++ K E L + YD + + + Sbjct: 475 SVSAVLNSAGGATHYVGALTDMSAHKQTEAL----LRHMAEYDALTDLPNRSLLHDRARA 530 Query: 388 -----SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + ++ A+ I L + V G + ++R+ +R+A I Sbjct: 531 AIQGAARTDRLAALLFIDLDRFKNVNDSLGHSVGDALLRQAAKRLASLLHGGDTIARPGG 590 Query: 443 DLYLLLCRENVQ---TFTRKIAMVNDFDSSFGYRNLRIH----KSAICEPLQGENAWSYA 495 D +++L E R +++ F + F + + P G +A + Sbjct: 591 DEFVMLLAEITDRAVAANRAAQIIDAFSTPFRVEHYELSVTPSIGIAIAPDDGVDADTLL 650 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 A+ ++ + + F D + E + + +R AM E + YQP ++ Sbjct: 651 RNADAAMYHAKESGRNTYRFFTDEMSLRVRERLELENLLRQAMSRDEFEVFYQPQFGLSD 710 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 ILG EAL RW ERG+I+P +FI +AED G I +G ++++TA + + RA+ Sbjct: 711 HRILGCEALVRWRHPERGLIAPERFIPLAEDTGLIVAIGRRVLETACHTAQGW--RAAGL 768 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 D + +N SP Q++ +F E ++ E GL A L +E+TE+ + + L Sbjct: 769 GDIPVAVNASPVQIHHGNFAETVAEVLAETGLPARLLEIELTESTLMADAAPVAATLAAL 828 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYN 733 + GVR++IDDFGTG S+L D +K+D F D+ G I I +AR Sbjct: 829 QDMGVRLAIDDFGTGYSSLAYLKRFQLDKLKIDRSFINDLPGDPDDANITVAIIGIARSL 888 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 + VIAEGVE+ R L+ GC + QGYL+ P+P + Sbjct: 889 GMSVIAEGVETAAQERFLVDQGCAEGQGYLFSPPVPVES 927 >UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacteria RepID=A2SDI4_METPP Length = 1006 Score = 607 bits (1566), Expect = e-172, Method: Composition-based stats. Identities = 115/472 (24%), Positives = 208/472 (44%), Gaps = 31/472 (6%) Query: 335 ALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES------ 388 + R+G + + + E + + K+ L +D +G + + Sbjct: 541 PIAGRDGRVLGAVMVFQDVTEAR----GLAQKMSYLAHHDGLTGLPNRVLFQDRVHQACQ 596 Query: 389 ---NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLY 445 + + AV + L + V G +++++ + QR+ I D + Sbjct: 597 SGRRHGRRFAVIFMDLDHFKHVNDSLGHAVGDELLKAVAQRLTGALRASDTICRLGGDEF 656 Query: 446 LLLCRE-------NVQTFTRKIAMVNDFDSSFGYRNLRIHKS--AICEPLQGENAWSYAE 496 ++L + V +KI G + + S P GE+ + + Sbjct: 657 VVLLSDLDDVEVDGVAEVAKKILRQVAQPCVLGGTEVNVGASLGIALFPGDGEDPDTLMK 716 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 + A+ + + + F A + + + ++R A+ G+ + YQP+V TR Sbjct: 717 RADAAMYRSKREGRNRYHFFSKAVDDAASARLQLEADMRRALAAGQFIVHYQPVVHGRTR 776 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 + EAL RW A +G+ SP FI +AE+ G I +G+ +++ A + R +S + Sbjct: 777 DAVAVEALLRWDRAGQGLQSPAVFIPVAEESGLIVPMGHWVLRQACEQLRAWS--GTALG 834 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +NVSP QL + F + ++ G+ + L EITE+ + + E + +L+ Sbjct: 835 GISVAVNVSPVQLAQADFVDTVADVLHATGVDGSRLEFEITESTLMQDPEATLEMLRRLK 894 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNR 734 GVRI+IDDFGTG S+L D++K+D F D+ A ++VR I +AR R Sbjct: 895 GLGVRIAIDDFGTGYSSLGHLKRFPVDTLKIDHTFVRDLEADADDRELVRAILAMARSLR 954 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPF---SAW--DKSGKLVK 781 + V+AEGVE+E A L + C QGYL+ +P +AW D++ L + Sbjct: 955 LHVVAEGVETEAQAAILAAMECPAFQGYLFARPAGAAVTAAWLQDRAATLAR 1006 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 607 bits (1566), Expect = e-172, Method: Composition-based stats. Identities = 114/486 (23%), Positives = 200/486 (41%), Gaps = 48/486 (9%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAE----------------------------IER 363 I AL + A+ + + + I E K AE Sbjct: 600 SISALHPEDKKAQGFLFVASDITERKRAEDALLRSRDELELRVKERTSELESEVLERRRI 659 Query: 364 SNKLLSLISYDQESGFIKNMAIIE---------SNNNQYLAVGIIKLCGLEAVEAVFGVD 414 +KL L +D +G + + + ++ +A+ I L + + G Sbjct: 660 ESKLRYLAHHDALTGLANRTLLQQRLGEAMDNAAQDDTKVAILFIDLDRFKTINDSLGHH 719 Query: 415 ERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENV-QTFTRKIA--MVNDFDSSFG 471 + +++ + R+ E I D ++++ + K+A +++ Sbjct: 720 IGDTLLKNVASRLTETLRSNDTIARLGGDEFMIILPLKANEALAGKLASKILDALRPPIR 779 Query: 472 YRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEEN 527 + P G + A+ + + + + + + Sbjct: 780 IDGHELFVTPSIGICFYPNDGVTVNALMRNADTAMYQAKANGRNTYCYFTAEMNAAADNY 839 Query: 528 IWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDI 587 I ++R A++ E + YQP++D+ T I EAL RW +G++ P +FIT+AE+ Sbjct: 840 FQIESDLRRAVDRNEFEVFYQPVIDLKTHRITSYEALVRWRHPTKGLVGPAQFITVAEES 899 Query: 588 GFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGL 647 G I E+G +++ A + R + +L +N+SP Q N+P+ E I+++ L Sbjct: 900 GLIGEIGTIVLRQACSQLRSWIDEGFTSP--ILALNLSPIQFNDPNLTEGICRILRDYDL 957 Query: 648 KANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKV 707 + + +EITETVI + E ++ L +G R+SIDDFGTG S+L D++K+ Sbjct: 958 TPDRIELEITETVIMQDGELALGTLQNLSSRGFRLSIDDFGTGYSSLAYLKRFPVDTLKI 1017 Query: 708 DSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQ 765 D F D+ IV I LA + VIAEGVE+++ L L C AQGY Sbjct: 1018 DRSFITDMTANENDRAIVTAIMALANSLHLSVIAEGVETKEQYDLLSALNCNFAQGYYMA 1077 Query: 766 KPMPFS 771 KPMP Sbjct: 1078 KPMPAE 1083 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 607 bits (1566), Expect = e-172, Method: Composition-based stats. Identities = 111/462 (24%), Positives = 196/462 (42%), Gaps = 27/462 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII------ 386 + A++ G + + I+++K E ++L L +D + + ++ Sbjct: 491 LNAVRNEVGHVTHYVGVFTDISKLKQTE----DRLDYLAHHDPLTDLPNRLLVLSRLEHA 546 Query: 387 ---ESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 +AV + L + V G ++++R + R+ + + D Sbjct: 547 LDGAQRRGCRVAVMFLDLDRFKTVNDSLGHAAGDELLRAVAARLRGALREEDTLGRLGGD 606 Query: 444 LYLLLCRENVQTFTRKIA----MVNDFDSSFGYRN-----LRIHKSAICEPLQGENAWSY 494 +++L E+V+ +V + F N +R P G++ + Sbjct: 607 EFMVLL-EHVEAPADAAVVAKNLVEVLAAPFALSNGHEVFIRASIGISFYPDDGDDFMTL 665 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 A+ + + + F + + E + + +R A+E E + YQP++ + Sbjct: 666 VRNADAAMYRAKAQGRNTYGFYTEDLIRSATERLALETRLRRALEHDEFVVYYQPVLGVK 725 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 +LGAEAL RW ++SP FI +AE+ G I LG +++ A + R + Sbjct: 726 DGRLLGAEALVRWKPQGEPMVSPAAFIPVAEETGLIVALGEWVLRDACRQVREWIDAGYA 785 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 + +N+S Q T++ E GL A L +EITE+ + EH +E+ Sbjct: 786 FG--QVAVNLSAEQFRRQDVSAMLATVLAETGLPATQLELEITESSLLEAGEHAVGLLER 843 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARY 732 L++QGV ++IDDFGTG S+L + D +K+D F DI + I I +AR Sbjct: 844 LKQQGVGLAIDDFGTGYSSLAYLKRFSIDKLKIDRSFVQDIADDSNDLAIASAIVAMARA 903 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 + V AEGVE E L LGC QGYL P+P ++ Sbjct: 904 LDMAVQAEGVEGEAQLELLRGLGCGSYQGYLCSPPLPADEFE 945 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 607 bits (1565), Expect = e-172, Method: Composition-based stats. Identities = 102/459 (22%), Positives = 200/459 (43%), Gaps = 25/459 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------- 385 I A++ G + I+I I + + A ++++ L YD + + Sbjct: 282 IHAVRNESGGIENCIAIYAEITDQRAA----ASRIQFLAHYDPLTLLPNRALLQDRMHQG 337 Query: 386 --IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + AV + L + + G + +++++ QR+ + + D Sbjct: 338 LAHAAREGTRAAVLFLDLDRFKTINDSLGHLVGDHLLQEVAQRLKASVREDDTVARRGGD 397 Query: 444 LYLLLCR-----ENVQTFTRKI--AMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAE 496 ++++ E KI AM + N+ P + + Sbjct: 398 EFIVMLPHVDSAEQAAHVAGKIIEAMEQTIPVNGYVLNVSFSIGISVFPDDAMDPDTLIR 457 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 +A+ + ++F F E + + ++ A+E GE L++QP + + Sbjct: 458 NADIAMYRSKASGRNQFQFFTADMNAHALERLALENDLHRAVERGEFRLMFQPQFE-GSG 516 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 +I+GAEAL RW +RG+++P +FI +AE+ G I +G +++ A + R + K Sbjct: 517 SIIGAEALLRWQHPQRGLVTPAEFIPVAEETGLIVPIGTWVLERACQQVRAWRDAGLKK- 575 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +N+S Q ++ + E ++ + ++ +L +E+TE+V+ + + +L+ Sbjct: 576 -ITVSVNISALQFSQKNLLELIRRLLAVSNIEPGTLELELTESVLMHDHVATSGLMSELK 634 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNR 734 + GVR++IDDFGTG S+L +K+D F D+ G AG I I LA+ Sbjct: 635 EMGVRMAIDDFGTGYSSLSYLRSFPISKLKIDQSFVRDLSDGGDAGAITGAIIGLAKNLN 694 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 + VIAEGVE+ A L C + QG+ + +P+ + Sbjct: 695 MRVIAEGVETAQQASFLQAQCCDEFQGHFFSQPVSPEKF 733 >UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K210_DESAC Length = 920 Score = 607 bits (1565), Expect = e-172, Method: Composition-based stats. Identities = 105/450 (23%), Positives = 198/450 (44%), Gaps = 26/450 (5%) Query: 337 KIREGDAKEII-SIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES------- 388 + + D ++ +I I+E K AE ++L+ +D +G + I + Sbjct: 461 RWIDLDRGHLVQAIIRDISERKAAE----DQLVHQAYHDPLTGLPNRLLISDRLKLAIAK 516 Query: 389 --NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYL 446 + + ++ L + + G ++I+ L QR+ E + F D +L Sbjct: 517 ARRHKTQAVLLLLDLDRFKNINDTLGHAVGDRILTTLAQRMQETLRDTDTVARFGGDEFL 576 Query: 447 LLCRENVQTFTRKIAMVNDFD----SSFGYRN----LRIHKSAICEPLQGENAWSYAEKL 498 +L E+++ + +++ L P Sbjct: 577 VLL-EDIRELSDVVSLAQKLSDLVSQPVLIDGEEMCLTTSVGISVAPEDSIEVDQLIRFA 635 Query: 499 KLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAI 558 A+ ++ + F F + + N+R A++ E+ + YQP V++++ I Sbjct: 636 DTAMYRAKEKGRNNFQFYTPDMNAHAGRRLQLENNLRKALQRQEMVVYYQPQVEMDSGRI 695 Query: 559 LGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDF 618 +G+EAL RW+ E G+ISP FI +AE+ G I E+G ++ A + + + + Sbjct: 696 IGSEALLRWMHPEHGLISPNDFIPLAEETGVIEEIGAWALEQACQQTVAWQKN---HPEL 752 Query: 619 LLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQ 678 + +N+S Q + + I+ + GL A L +E+TE+++ + + +L K Sbjct: 753 KIAVNLSARQFRNENLVDDIEQILNKTGLAARHLEMELTESLLMEDVDVAIDLMNRLTKL 812 Query: 679 GVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVI 738 G+ ++IDDFGTG S+L D +K+D F + I R I L R + +I Sbjct: 813 GITLAIDDFGTGYSSLSHLNRFPIDKLKIDRSFVNSMSLDNNGIARTIITLGRTLGLSII 872 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPM 768 AEGVE+ + + L++LGC QAQGY + +P+ Sbjct: 873 AEGVENNEQRQLLLQLGCPQAQGYYFSRPV 902 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 94/451 (20%), Positives = 178/451 (39%), Gaps = 24/451 (5%) Query: 341 GDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI---------IESNNN 391 G + I + +++AE ++ L +D +G + A + ++ Sbjct: 637 GRLRRIRGTAQDVTALREAEA----RIRYLARFDPLTGLLNRSAWQDHAQDVLRHAARHD 692 Query: 392 QYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE 451 AV + L + V G ++++ ++ R+ + D +++L Sbjct: 693 DRCAVLFLDLDDFKTVNDSLGHAAGDRLLAQVACRLGGCVRAEDLVARIGGDEFVILLSR 752 Query: 452 --NVQTFTR-KIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISS 504 + + R +++ + + P G + + A+ Sbjct: 753 LAHAEEPARVAERVLDALARPLQIDSQPLRVGASIGIALYPADGGEIDTLLKHADTAMYE 812 Query: 505 IRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEAL 564 ++ + + F + + +R A+E G+L L YQP +D + + G EAL Sbjct: 813 AKESGRNAYRFFLPEMTQRVTRRLQTEAELRKAIESGDLRLHYQPQIDAASGRVYGCEAL 872 Query: 565 CRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINV 624 RW ERG++ P +F+ AE G I LG +++ A + + + +N+ Sbjct: 873 VRWQHPERGLLPPDRFVPFAEQSGLIVPLGEWVLREACLQQVRWRDAGL--PPLDVAVNI 930 Query: 625 SPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISI 684 S Q F ++ E G + +EITE+ + + +QL G+ +++ Sbjct: 931 SALQFRRRDFVATVARVLGETGADPARIELEITESALMDATPELVASFDQLVALGLTLAL 990 Query: 685 DDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGV 742 DDFGTG S+L + +K+D F + I LAR + V+AEGV Sbjct: 991 DDFGTGYSSLSYLKRLPLRRLKIDRSFVDGLPDNPEDAAITSATLSLARDLGMEVVAEGV 1050 Query: 743 ESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 E+ED L K GC QGYL+ +P+ + Sbjct: 1051 ETEDQRGYLCKRGCRAMQGYLFSRPLGVEEF 1081 >UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SC6_GEOMG Length = 821 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 111/469 (23%), Positives = 209/469 (44%), Gaps = 34/469 (7%) Query: 335 ALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES------ 388 + +G A + I + I + K AE K+ L YD +G +++ Sbjct: 354 PVFNEQGKATKFIKVVEDITDRKRAE----EKIRRLAYYDSLTGLPNRPLMMDRLSQAIR 409 Query: 389 ---NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLY 445 + + +A+ + L + V G +++++++ R++ + + D + Sbjct: 410 HARRHGEVVALLFLDLDRFKDVNDSQGHRVGDRLLQEVAARLSGCTRESDTLARLGGDEF 469 Query: 446 LLLCR-----ENVQTFTRKIAMVNDFDSSFGYRNLRIHK----SAICEPLQGENAWSYAE 496 +++ + KI + F +H + P G N + Sbjct: 470 VIIAPGVRAATDASLLADKI--LAALAEPFTLDRQTLHIATSIGIVLFPSDGGNGEMLLQ 527 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 + +A+ + +D + + F E + ++R A+ GE FL+YQP V+ T Sbjct: 528 RADMAMYAAKDRGGNSYRFFSAEMNTRAVERHELEEDMRQALTNGEFFLMYQPQVNTGTW 587 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 ++G EAL RW +G+I P +FI +AE+ GFI++LG +++ A + + Sbjct: 588 KVVGVEALVRWNHPRKGVILPSRFIPVAEETGFISKLGRWVLEEACRQGAQWQHDGL--P 645 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +N+ Q + ++++ GL + L +E+TET++ +E + QL+ Sbjct: 646 PLQMGVNLCARQFTHEEIVGTVSDVLQKTGLPSELLEIELTETMLM-DSETAVSTLGQLK 704 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNR 734 GVR++IDDFGTG S+ D IK+D F DI + G I+ I +AR Sbjct: 705 ALGVRLAIDDFGTGYSSFNYLKHFPLDRIKIDQSFIRDIGQSRGNGAIIEAIVAVARSLG 764 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKP-MPFSAWDKSGKLVKE 782 V+AEGVE+E+ R L+ + C QG+ + +P +P D +L++E Sbjct: 765 PEVLAEGVETEEQLRYLMSITCADIQGFYFSRPLLP----DDVSRLIRE 809 >UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W545_9CYAN Length = 709 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 113/453 (24%), Positives = 197/453 (43%), Gaps = 23/453 (5%) Query: 335 ALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES------ 388 LK +G I+ I+ K E +L +D + +E Sbjct: 246 PLKDADGVITHIVFSVTDISHHKHVE----EQLCHDALHDNLTRLPNRTLFMERVNHAIK 301 Query: 389 ----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 N + AV + L + V G D ++++ +++ + + + D Sbjct: 302 LAKRNQDYLFAVLFLDLDRFKVVNDSLGHDVGDQLLTATARQLEKCVRTTDTVAHLSGDE 361 Query: 445 YLLLCRE--NVQTFTRKIAMVND-FDSSFGYRNLRIHKSAICEPLQGEN----AWSYAEK 497 + +L + +++ TR + + F N + SA + Sbjct: 362 FTILLEDIKDIKDATRVAERIQATLKAPFNLNNHEVFTSASIGIALSSTGYERSEDILRD 421 Query: 498 LKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 +A+ ++ + D E + + ++R A+E E + YQPI + T Sbjct: 422 ADIAMYRAKELGKARHEIFDKIMHARALELLRLENDLRRALERQEFEVYYQPITSLVTGM 481 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 + G EAL RW E G++SP +FI +AED G I LG ++ A + R + + + Sbjct: 482 LTGFEALVRWRHPELGLVSPAEFIPVAEDTGLIIPLGEWVLHEACRQLRMWHTQFPTPEP 541 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK 677 + +N+S Q+ EP E+ I+ E GL + L +EITE+++ E + QLR Sbjct: 542 LKMSVNLSGKQIKEPDLIEQIDHILAETGLDGSFLKLEITESILMENAETVTKMLLQLRA 601 Query: 678 QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRI 735 + +++S+DDFGTG S+L + +++K+D F + +I+R I LA R+ Sbjct: 602 RNIQLSVDDFGTGYSSLSYLHRFPVNTLKIDRSFVSKMNPKNRNTEIIRTIITLAHSLRM 661 Query: 736 PVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 VIAEGVE+ + EL L C Q QGYL+ KP+ Sbjct: 662 DVIAEGVETLEQLTELKLLNCEQGQGYLFSKPL 694 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 105/459 (22%), Positives = 194/459 (42%), Gaps = 25/459 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--- 388 I L+ G +++ + I+E K+ E + + +D + I + Sbjct: 590 SISLLRDEAGQVSHHVALFSDISERKEQEAH----IRHMAEHDFLTDLPNRALIHDRLAQ 645 Query: 389 ------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 LAV + L + + G +++++++ QR+ + Sbjct: 646 AIRAAARQKNRLAVLFLDLDHFKNINDTLGHAHGDELLKQVAQRLQHTVRGSDTVGRNGG 705 Query: 443 DLYLLLCRE---NVQTFTRKIAMVNDFDSSFGYRN----LRIHKSAICEPLQGENAWSYA 495 D ++L+ E + +++D F + P G Sbjct: 706 DEFVLIVPELASPAEAAQLAQRLLDDLRRPFQIDGQALAISTSIGISLFPDNGSELQELL 765 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 LA+ + + + F ++ E + + ++R A+E +L+LVYQP I+ Sbjct: 766 VSADLAMYHAKAQGRNRYQFFTPELNAQVAERLTLENHLRQALERQQLYLVYQPQFAIDN 825 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 R ++G EAL RW E+G+ISP +FI +AE+ G I E+G ++ A + + + Sbjct: 826 RRLVGCEALLRWQHPEQGLISPARFIPLAEETGLIVEIGRWVLDEACRQAAAWLAAGT-- 883 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 + +NVS QL +P + + L + L +E+TE+ + E +++ Sbjct: 884 -PLRVAVNVSARQLGQPDLLAEVEAALARHRLPSCWLELEVTESTLMEDAEQAVRHLQAF 942 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYN 733 +++G+ +++DDFGTG S+L +PD IK+D F ++ IV I LA Sbjct: 943 KERGIHLAVDDFGTGYSSLTYLKRFSPDLIKIDRAFVMNLPDNRDDAAIVSAIVQLAEAL 1002 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 + +AEGVESE+ L + GC QGYL +P Sbjct: 1003 GMQTLAEGVESEEQLDFLAQAGCDVVQGYLTGRPQSAGE 1041 >UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK8_VARPS Length = 1107 Score = 605 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 119/477 (24%), Positives = 212/477 (44%), Gaps = 28/477 (5%) Query: 315 EMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYD 374 +T+ + L L + I+A + ++ +I++ IA+ K + L + S+D Sbjct: 621 AVTDSITALELLGSNPYAIDA---QTQESLRVIAL--QIAQYKQRKQA-ERSLRFMASHD 674 Query: 375 QESGFIKNMAI---------IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQ 425 +G A+ + + + AV + L + + G +++++ + Sbjct: 675 GLTGLFNRAALQHELARAIKRSNRHQKQFAVIFVDLDRFKHINDTLGHGVGDEMIKICGE 734 Query: 426 RIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDF----DSSFGYRNLRIHKSA 481 R+ + + F D ++LL EN+ + + F +H SA Sbjct: 735 RLTALLREADVVARFGGDEFVLLL-ENLSSANDAAGLAEKVLACCAEPFFLAGRELHVSA 793 Query: 482 I----CEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHA 537 P G +A + + A+ ++ + F F + E + + +RHA Sbjct: 794 SVGVSIYPDNGADAEALLKNADTAMYRAKERGRNTFRFYAAKMNAQNTEQLMLESALRHA 853 Query: 538 MEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQI 597 +E GEL + YQP +D+ T+ I+G EAL RW G+I P++FI IAE++G I LG Sbjct: 854 LERGELEMHYQPKMDLQTQRIVGVEALMRWHHPILGMIPPVQFIPIAEELGLIVSLGKWA 913 Query: 598 IKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEIT 657 ++ A + R + + L+ +N+SP Q +++ +GL+ + L +EIT Sbjct: 914 LERACADSRSWQKYGL--PKVLMSVNLSPRQFESRTLIADIQAVLEASGLEPSLLELEIT 971 Query: 658 ETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG 717 E + EH + +R GV ++IDDFGTG S+L ++K+D F D+ Sbjct: 972 EGAVMANPEHAAKLLRAIRDMGVGLAIDDFGTGYSSLSYLKHFPLSTVKIDRSFINDLSQ 1031 Query: 718 TAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 A ++ I LA R+ V+AEG+E+ L GC +AQGY KP+P Sbjct: 1032 DADARALIDGIITLAHGLRMKVVAEGIETTAQLDYLRSHGCDEAQGYWLCKPVPADE 1088 >UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4VY11_9CYAN Length = 1393 Score = 605 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 108/485 (22%), Positives = 211/485 (43%), Gaps = 25/485 (5%) Query: 311 RQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSL 370 L++ + ++ ++ ++ +G IS I++ K E +LL Sbjct: 906 SHLQTERRLISKSGRIVNAILKVVLVRDAQGQPLHYISQVVDISDRKRME----EQLLHD 961 Query: 371 ISYDQESGFIKNMAIIE----------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIV 420 +D +G ++ + AV ++ L + + G ++++ Sbjct: 962 AFHDVLTGLPNRALFMDRLEYALRRAGQRWDYLCAVIVLDLDRFKVINDSLGHLVGDRLL 1021 Query: 421 RKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVND----FDSSFGYRNLR 476 + +R+ + D + +L +++ + +SSF Sbjct: 1022 SAIAERLQGCLRPSDTLARLGGDEFTILL-DDIPNTAAATDIAKSIHQTLESSFNLDGYE 1080 Query: 477 IHKSAICE-PLQG---ENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIAR 532 + +A L G A A+ + + ++ D A + + Sbjct: 1081 VFATASIGIALSGMGYHRAEDLLRDADTAMHRAKLQGTACYVMFDTAMSGRALAQLRLET 1140 Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 +R A+E EL + YQPI+ + T I G EAL RW E+G+ISP FI +AE+ G I Sbjct: 1141 ELRWAIERQELEVYYQPIISLGTGKITGFEALVRWQHPEQGMISPGAFIPLAEETGLIIP 1200 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 +G +++T+ + R + Q+ + +N+S Q ++ + E+ I++E + ++L Sbjct: 1201 IGQWVLRTSCYQLRQWQQQFPHYPPLTMSVNLSGKQFSQTNLIEQIAQIIQETEVNPSTL 1260 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +EITE+ I ++ +E+L+ +++ IDDFGTG S+L R ++ D++K+D F Sbjct: 1261 KLEITESGIMEHSDSASALLERLKALNIQLYIDDFGTGYSSLSRLHQFPIDALKIDRSFV 1320 Query: 713 GDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPF 770 + G G+IV+ I LA + V+AEG+E+ +L C QGY + KP+ Sbjct: 1321 SRMGDAGENGEIVQAIVTLAHNLGMDVVAEGIETNMQLAQLRGRRCEYGQGYFFSKPLNR 1380 Query: 771 SAWDK 775 A ++ Sbjct: 1381 QAAEQ 1385 >UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium extorquens group RepID=B7KTV8_METC4 Length = 772 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 119/480 (24%), Positives = 208/480 (43%), Gaps = 26/480 (5%) Query: 309 FRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLL 368 R+ F ++ + + + G + + + KDAE+ ++ Sbjct: 286 ARQPFRDIVVPFTRAGEMRWWSISGRPVYDETGTFLGYRGVCSDVTATKDAEL----RIA 341 Query: 369 SLISYDQESGFIKNMAIIESNN-------NQYLAVGIIKLCGLEAVEAVFGVDERNKIVR 421 L +D +G + ES + LAV + L G +AV +G + ++ Sbjct: 342 HLAHHDALTGLPNRAFMSESLHQALRDPDRACLAVLSLDLDGFKAVNDRYGHPGGDALLT 401 Query: 422 KLCQRIAEKYAQCCDIVTFNADLYLLL-----CRENVQTFTRKIAMVNDFDSSFGYRNLR 476 + +R+ + + + F D +++L V+ R++ ++ Sbjct: 402 SVAERLQNEVSGGDIVARFGGDEFVVLNVAFTSPSEVEDLARRLIESLSTPVPLDNESVT 461 Query: 477 I--HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNI 534 I P G A + A+ + F F + +++ + +++ Sbjct: 462 IGVSIGIAFAPTDGRTAEELLKNADAALYRAKTAGRGTFRFFEPEMDRKLQARQRLVQDL 521 Query: 535 RHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELG 594 R+A+ EL L YQP V T I G EAL RW ERG+ISP++FI +AE+ G I +G Sbjct: 522 RNALTRDELRLDYQPFVKSETGVISGCEALLRWRHPERGMISPVEFIPLAEESGLIVPIG 581 Query: 595 YQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCV 654 +I+ A E + + + +NVSP Q + + +GL L V Sbjct: 582 MWVIQQACREAASW------PSTYRISVNVSPVQFRSRDLPQVILAALTSSGLAPARLEV 635 Query: 655 EITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD 714 E+TE V+ + + Q+R GVR+++DDFGTG S+L D IK+D F + Sbjct: 636 EVTEAVLIDDADTALEILRQIRSLGVRVALDDFGTGYSSLSYLRRFPFDKIKIDRSFVQE 695 Query: 715 IF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 + + IV+ I D+A+ + V AEGVE++D A+ L + GC + QG+LY +P P + Sbjct: 696 LDTRHDSQVIVQAIRDMAQGLGMTVTAEGVETDDQAKRLRQTGCEELQGFLYSRPRPANE 755 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 115/475 (24%), Positives = 197/475 (41%), Gaps = 26/475 (5%) Query: 317 TELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQE 376 L N + + S + AL G+ + + I E K AE K+ L +D Sbjct: 385 VPLDNGMHWFEMSVTRKSALP---GEEPLFLVLCRDITESKQAE----RKIQLLAHFDSL 437 Query: 377 SGFIKNMAI---------IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRI 427 +G + + N LA+ ++ L + V G ++++ L R+ Sbjct: 438 TGLPNRVLLTDRCNLALSAAQRNGTPLALLLLDLDHFKNVNDSLGHRVGDEVLIALAGRL 497 Query: 428 AEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIA--MVNDFDSSFGYRNLRI----HKSA 481 + + D ++L+ E IA ++ +F + Sbjct: 498 KGAVREQDTVCRLGGDEFILVLPETNAAGAAHIAEMLLQSALVAFELEPHELTVTPSIGI 557 Query: 482 ICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIG 541 P G + + + A+ + + + F E + + +R A+E Sbjct: 558 ALFPGDGSDFDTLSRCADAAMYRAKKDGRNNYRFFTAEMQARSERTLTLENALRRALERN 617 Query: 542 ELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTA 601 +L L YQP + + + ++GAEAL RW E G + P +FI +AE G I +G +++T+ Sbjct: 618 QLQLHYQPQISLASGRVVGAEALLRWSHPELGAVPPAEFIPVAETCGLILPIGEWVLRTS 677 Query: 602 MGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVI 661 + + + + L L +N+S Q E T+I+ E L A+ L +E+TE V Sbjct: 678 VQQLKAWIDAGML--PIALSVNLSSVQFRHADLPELVTSILNEAQLPAHLLELELTENVA 735 Query: 662 ERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG- 720 + L ++GVR+SIDDFGTG S+L + IK+D F DI + Sbjct: 736 MTDPLGAIAVMNNLHERGVRMSIDDFGTGYSSLSYLKKFRVYKIKIDQSFVRDITEDSDD 795 Query: 721 -KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 IV I +A + IAEGVE+E L GC + QGY + +P+P ++ Sbjct: 796 KAIVGAIISMATSLGMQTIAEGVETEGQLEFLKAKGCTEVQGYYFSRPLPVEQFE 850 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 107/438 (24%), Positives = 194/438 (44%), Gaps = 24/438 (5%) Query: 353 IAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNNQ---------YLAVGIIKLCG 403 I E K AE ++ + +D +G + + E N LAV I L Sbjct: 490 INERKMAE----ERVKHMALHDALTGLPNRLLLEERLENALSDAKSHQWQLAVLFIDLDR 545 Query: 404 LEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE-----NVQTFTR 458 + V G E ++++ ++ R+ + + D ++++ E + Sbjct: 546 FKLVNDTLGHHEGDQLLVEVANRLHQVIGANDTVARLGGDEFVIVLNEIAGSTEINGVIE 605 Query: 459 KIAMVNDFDSSFGYRNLRI--HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFC 516 I +++ + P GE + A+ + + + Sbjct: 606 DIQQNFKPAVKLALQDMFVTPSIGVAIYPEDGETPVQLMKNADAAMYHAKASGRNCAQYF 665 Query: 517 DDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIIS 576 + + + ++E I + + A+++G+ L YQP +D+ + I+GAEAL RW E+G+IS Sbjct: 666 NRSLDDSLKERISLENALNQALKLGQFELYYQPQLDVKSNRIIGAEALIRWNHPEKGMIS 725 Query: 577 PLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHE 636 P FI +AE+ G I ++G ++ A + + ++ D + +N+S Q+ + F Sbjct: 726 PDAFIPLAEESGLIVDIGSWVLHQASSQLAQWRKQGF--DQLSVSVNLSALQVQKESFAR 783 Query: 637 RFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKR 696 +++E G+ L +E+TE++I R E ++++ G++IS+DDFGTG S+L Sbjct: 784 EVADVIREYGVPEACLDLELTESMIMRNAEETIAALDKIHNLGIQISVDDFGTGYSSLSY 843 Query: 697 FYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKL 754 D +K+D F DI I + I +A + VIAEGVE+ L Sbjct: 844 LKRFPLDKLKIDRSFVQDITVDTDDAMICKTIISMAHNLNLQVIAEGVETNAQLELLRDY 903 Query: 755 GCVQAQGYLYQKPMPFSA 772 GC Q QGYL+ KP+P Sbjct: 904 GCEQYQGYLFAKPLPVEQ 921 >UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB1_CYAP4 Length = 884 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 101/431 (23%), Positives = 192/431 (44%), Gaps = 20/431 (4%) Query: 360 EIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAV 410 + + +D + I+ + + L+V + L + + Sbjct: 437 RQHKEQVIRYQAFHDLLTDLPNRALFIDRLNLALSNAHRSGEKLSVLFLDLDRFKTINDT 496 Query: 411 FGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE--NVQTFTR-KIAMVNDFD 467 G +++++ + R+ + I + D + +L + V + M++ + Sbjct: 497 LGHSVGDQLLKAVAHRLTHCLREGDTIARWGGDEFTILLPQIHQVNDVAKTAQRMLSALE 556 Query: 468 SSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNE 523 F N + L G + + + +A+ + + + F N Sbjct: 557 QPFHLENHELYITPSIGIAIYDLDGHDGETLIKHADMALYQAKQLGRNTYQFFCSGLSNG 616 Query: 524 IEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITI 583 E + + +++RHA+E E L YQP V+I T I G EAL RW E G++ P F+++ Sbjct: 617 APERLNLEKSLRHALERQEFLLYYQPQVNIKTGKITGMEALLRWKHPEMGLVIPQLFMSV 676 Query: 584 AEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMK 643 AE+ G I +G +++TA + + + + + +N+S Q +P I+ Sbjct: 677 AEESGLIVAIGEWVLRTACAQNKTWQDQGL--PPICIAVNLSARQFRQPDLTGMIARILD 734 Query: 644 ENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPD 703 E GL L +EITET + E +++L+ G++IS+DDFGTG S+L + + Sbjct: 735 ETGLPPQYLDLEITETTAIQDIEFTKRVLQELQDMGIQISMDDFGTGYSSLAHLQQFPLN 794 Query: 704 SIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQG 761 ++K+D F D+ + +IV + LAR + V+AEGVE+++ L L C +AQG Sbjct: 795 TLKIDRSFVRDVAANSRDAQIVTAVIGLARGLNLNVVAEGVENDEQLNCLESLHCEEAQG 854 Query: 762 YLYQKPMPFSA 772 Y++ +P+ A Sbjct: 855 YIFNRPLEADA 865 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 110/473 (23%), Positives = 195/473 (41%), Gaps = 28/473 (5%) Query: 317 TELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQE 376 + +++T + D +G I+ I E K AE + L +D Sbjct: 192 STMIHTDGSIRDIIFSKTVFGNTDGSIGGIVGTILDITERKRAE----EAIQQLAYFDAL 247 Query: 377 SGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRI 427 +G + + V + + + V G + ++ + RI Sbjct: 248 TGLPNRTLLRDRVSQLLSQARREGGGFGVLHLDVDRFKGVNDSLGHACGDVLLSTVAGRI 307 Query: 428 AEKYAQCCDIVTFNADLYLLLCR-----ENVQTFTRKIAMVNDFDSSFGYRNLRI----H 478 A + + +D ++++ E+V RKI V + + + I Sbjct: 308 ASSIRESDTVARLGSDEFVVILPGVGHEEDVVAVVRKI--VEELNRPIVIQGNDIFCTAS 365 Query: 479 KSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAM 538 P G +A + +A+ ++ + F + E + + ++R A+ Sbjct: 366 IGIAIYPTDGSSADILLKNADMAMHKAKEFGGDGYQFYSSELNHRAMERLTLETSLRRAL 425 Query: 539 EIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQII 598 E E L YQP++ I + I+G EAL RW S E G++SP +FI +AE+ G I +G ++ Sbjct: 426 ERREFLLHYQPLLGIGSGRIVGVEALLRWDSPELGMVSPARFIPLAEETGLIVPIGEWVL 485 Query: 599 KTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITE 658 ++A + R + + + +NVS Q F ++ GL L +E+TE Sbjct: 486 RSACEQLRALHELGYT--ELCVSVNVSARQFRHDGFCAMVAAVLAAVGLDPRYLELELTE 543 Query: 659 TVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD--IF 716 +VI +E + +L++ GV ++IDDFGTG S+L D +K+D F + + Sbjct: 544 SVIMERSETAKGILRKLKQMGVSLAIDDFGTGYSSLSYLKHFPIDRLKIDRTFVKEVTVD 603 Query: 717 GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 I I LA + V+AEGVE+ + L L C QGY +P+P Sbjct: 604 QDNAAIAEAIVALAHVLNLDVVAEGVETAEQLAFLAALRCDVVQGYHIARPLP 656 >UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WS3_RHOFD Length = 1034 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 105/464 (22%), Positives = 194/464 (41%), Gaps = 29/464 (6%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--- 388 I + G ++IK I + K AE E + L YD +G + + Sbjct: 569 AIAPIFDDHGRPIHYLAIKEDITKRKAAEAE----IEHLAFYDLLTGLPNRRLLNDRLQQ 624 Query: 389 ------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + ++ A+ I L + + G ++ + +++++ QR+ +C + Sbjct: 625 VLAVGTRSRRHGALLFIDLDNFKNLNDTQGHEQGDVLLQQVAQRLNFCVRECDTVARLGG 684 Query: 443 DLYLLLCRE----------NVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICEPLQG--EN 490 D ++++ ++ + +KI FG+ S + Sbjct: 685 DDFVVMLQDLSEQQTEAATQAEGVGQKILDALHQPYPFGHFTHHGSASVGVALFNASQDT 744 Query: 491 AWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPI 550 ++ LA+ +D + F D I + ++R ++ + L YQP Sbjct: 745 VEELLKRADLALYQAKDAGRNTLRFFDPDMQAVISARAEMEADMRLGLQENQFLLYYQPQ 804 Query: 551 VDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQ 610 V+ + ++G EAL RW RG+++P FI +AED G I LG +++ A + + + Sbjct: 805 VN-HAGRLIGVEALVRWQHPLRGLVAPAHFIPLAEDTGLILPLGQWVMEAACRQLQLWRT 863 Query: 611 RASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYL 670 +A + +NVS Q + F + G A+ L +E+TE+++ + + Sbjct: 864 QAHTAQ-LTIAVNVSALQFHGESFVSDVLATLARTGAPADRLKLELTESLLVKDVDGVIA 922 Query: 671 NIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFD 728 + L+ GV S+DDFGTG S+L + D IK+D F D +VR Sbjct: 923 KMVALKAHGVGFSLDDFGTGYSSLSYLKRLPLDQIKIDQSFVSDALSNPKDAALVRATVA 982 Query: 729 LARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 + R + VIAEGVE++ L GC+ QGY + +P+P + Sbjct: 983 MGRGLGMMVIAEGVETQMQRDFLEGEGCLNFQGYFFGRPVPVAE 1026 >UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TX60_9PROT Length = 961 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 104/460 (22%), Positives = 200/460 (43%), Gaps = 30/460 (6%) Query: 337 KIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI---------IE 387 + +G + ++ + I E K+A+ ++L + +D + + + + Sbjct: 505 RFSDGQNR-LLVVVRDITERKNAQ----DRLEFMAHHDPLTELPNRLLLQDRVDRAIALA 559 Query: 388 SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLL 447 + +A+ + L + V G +++++ + R+ + + I D +++ Sbjct: 560 EREGRRVALMFLDLDQFKTVNDSLGHAAGDRLLKDVAWRLRQCVRESDTIARLGGDEFVI 619 Query: 448 LC-----RENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKL 498 + + V KI + P G + + +K Sbjct: 620 VLNAVRDADGVVEVAEKIH--KSVAPPITIEGQEVTSTLSMGIAMFPEDGHDFDTLMKKA 677 Query: 499 KLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAI 558 A+ ++ S + F + ++ + + A+E GE L +QP V + A+ Sbjct: 678 DAAMYHAKESGRSTYRFFAARMNADAVAHLALRSGLHRALERGEFQLYFQPQVSLTGGAV 737 Query: 559 LGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDF 618 +GAEAL RW ERG++SP +FI +AED G I +G +++ A + + + Sbjct: 738 VGAEALIRWNHPERGLVSPAEFIPVAEDSGLIVPMGDWVLRQACRQAALWQ---AGGHAL 794 Query: 619 LLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQ 678 + +N+S Q ++E+GL +SL +E+TE+++ + +E +L Sbjct: 795 TMAVNLSALQFRRGDLERAVREALEESGLAPHSLELELTESIMIQDHEAVMDMTRRLGAL 854 Query: 679 GVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIP 736 GV++SIDDFGTG S++ D +K+D F D+ I + I +A ++ Sbjct: 855 GVQLSIDDFGTGYSSMAYLKRFAVDKLKIDQSFVRDVHTDTDNAAITQAIIQMAHSLKLE 914 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKS 776 VIAEGVE +V L GC AQG+LY +PM ++K+ Sbjct: 915 VIAEGVEVTEVVEFLRDHGCDLAQGFLYGRPMTAQRFEKT 954 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 114/467 (24%), Positives = 201/467 (43%), Gaps = 30/467 (6%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---- 388 I + G +S++ I E K AE +++ L YD + + +++ Sbjct: 771 ILPIANSAGVFTHWVSVQRDITERKAAE----SRIQHLAFYDMLTNLPNRLLLLDRLEQA 826 Query: 389 -----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + A+ + L + + G D + ++ ++ QR+ + D Sbjct: 827 LLNSMRLKRSGALLFLDLDNFKTLNDTHGHDFGDMLLEQVAQRLLNSVRITDTVARLGGD 886 Query: 444 LYLLLCRENVQTFTRKIA--------MVNDFDSSFGYRNLRIHKSAICEP-----LQGEN 490 ++++ + ++ F + S Q Sbjct: 887 EFVVVVENLSEQGCNAAQEASLVADKILLALSQPFRLSGYEHYSSCSIGVALFCNEQQVT 946 Query: 491 AWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPI 550 ++ LA+ + + F F D A I + + ++R A+ E+ L YQP Sbjct: 947 VDELLKRADLAMYEAKAAGRNTFRFFDPAMQALITKRAAMEEDLRQALRRDEMRLYYQPQ 1006 Query: 551 VDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQ 610 VD ++LGAEAL RW ++G++SP FI +AE+ G I +G +++TA + ++ Sbjct: 1007 VDSQ-GSLLGAEALVRWEHPQQGLLSPAAFIELAEETGLILPIGEWVLRTACMQLVAWAG 1065 Query: 611 RASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYL 670 R +L +NVS QL++ F +R +I+KE G SL +E+TE+ + E Sbjct: 1066 R-PETAGLVLSVNVSARQLHQHDFIDRVFSILKETGANPQSLKLELTESTLVENIEEMIT 1124 Query: 671 NIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD--IFGTAGKIVRIIFD 728 + L+ GV S+DDFGTG S+L + +K+D F D + IV+ I Sbjct: 1125 KMNILKAMGVGFSMDDFGTGYSSLAYLKRLPLSQLKIDRSFVRDVLVDSNDASIVQTIIA 1184 Query: 729 LARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 L I V+AEGVES + + L K GC++ QGYL+ +P P ++ Sbjct: 1185 LGHGLGIEVVAEGVESWEQQQFLEKHGCLEYQGYLFGRPQPAEQLER 1231 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 604 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 108/454 (23%), Positives = 206/454 (45%), Gaps = 28/454 (6%) Query: 338 IREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE---------S 388 +G +++ ++I A+ K+ L +D +G +E Sbjct: 239 NEDGTPSYSVALISNITPHHQAK----QKIRQLAYFDGLTGLPNRQLFLEHCNSSLTQAR 294 Query: 389 NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL 448 N L V II + + V +G + + +++ + QR+++ ++ + +D + + Sbjct: 295 RNRSPLGVCIIDIDRFKGVNDTYGYESGDALLKTVSQRLSDCMSREDVLARLGSDEFAAV 354 Query: 449 C-----RENVQTFTRKIAMVNDFDSSFGYRNLRIHKS----AICEPLQGENAWSYAEKLK 499 ++ +K M++ +++ S P+ G +A + + Sbjct: 355 IASVGSQDEFSVLAQK--MLHCLTEPIQIGEQKLYCSGGMGIALFPVDGVDAEALLKNAA 412 Query: 500 LAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAIL 559 A+ + H + F F E I I +R A+++ +L L YQP VD+ T I+ Sbjct: 413 TAMHQAKQHGSNNFRFFSKGMNRMAWERIEIETGLRRALDLQQLALHYQPQVDLKTGHII 472 Query: 560 GAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFL 619 G EAL RW S E G +SP++FI +AE+ G I +G ++++A + + + + Sbjct: 473 GMEALLRWESPELGRVSPMRFIPLAEETGLILPIGNWVLESACRQAKAWHRAGF--PSLR 530 Query: 620 LHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQG 679 + +N+S Q + F +R I++ +G+ L +E+TE++I ++ + + ++ +G Sbjct: 531 MAVNISARQFKQAGFIDRLDAIIQRSGINPELLEMELTESLIMEKSDETLMTLVDIKSRG 590 Query: 680 VRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNRIPV 737 ++++IDDFGTG S L D IKVD F DI I I +A +I V Sbjct: 591 IKLAIDDFGTGYSMLSYLKHFPIDRIKVDRSFVRDIPENTDDAAITEAIIAMAHSLKIEV 650 Query: 738 IAEGVESEDVARELIKLGCVQAQGYLYQKPMPFS 771 IAEG+E+ + L C + QGY + +P+P Sbjct: 651 IAEGIETREQLAFLKDRACEEGQGYYFGRPVPVE 684 >UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9D8_9BURK Length = 897 Score = 604 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 102/464 (21%), Positives = 192/464 (41%), Gaps = 29/464 (6%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE---- 387 + A +I + + I + + E ++ L YD +G +++ Sbjct: 428 SVSASRIPHTEHDTFVVTLRDITQQRQDE----EEIRRLAFYDPLTGLPNRRLLMDRVRQ 483 Query: 388 -----SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + Q+ A+ + L + + G D +++++++ R+ + + Sbjct: 484 AMVNSARLGQHGALMFLDLDHFKLLNDTLGHDVGDELLQQVAYRLRNCVREGDSVARLGG 543 Query: 443 DLYLLLC------RENVQTFTRKIA--MVNDFDSSFGYRNLRI----HKSAICEPLQGEN 490 D +++L R + +A +++ + R + E Sbjct: 544 DEFVVLLEGLSDNRTDAANQAEVVAHKILDALALPYSLRGHGYNSTPSIGIVVFMEDHET 603 Query: 491 AWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPI 550 +K +A+ + + F D + + +A+ IR ++ E L YQ Sbjct: 604 MDDLLKKADVAMYQAKAAGRNTARFFDPVMQAAVTTHAELAKEIRLGLQRHEFVLHYQVQ 663 Query: 551 VDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQ 610 +D GAEAL RW RG++SP FI +AE+ G I LG ++++A + +S Sbjct: 664 IDSQ-GRCTGAEALVRWNHRVRGLVSPAHFIPLAEETGMILPLGEWVMESACQQLVEWS- 721 Query: 611 RASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYL 670 R + + L +NVS QL +P F ++ +G A L +E+TE+++ E + Sbjct: 722 RNPMTAHWTLAVNVSASQLAQPEFVASVREALQRSGAPAGQLKLELTESMLVDDVEDIIV 781 Query: 671 NIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFD 728 + +++ GV S+DDFGTG S+L + +K+D F D+ I R + Sbjct: 782 KMMAIKELGVSFSLDDFGTGYSSLSYLKRLPLSQLKIDQSFVRDVLTDPSDAVIARTVVA 841 Query: 729 LARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 L + VIAEGVE+ + L + C QGY + +P P A Sbjct: 842 LGHSLGLTVIAEGVETAEQRDALAAMQCDAFQGYYFGRPAPADA 885 >UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K2X7_AZOSB Length = 1070 Score = 604 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 106/460 (23%), Positives = 193/460 (41%), Gaps = 25/460 (5%) Query: 337 KIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI---------IE 387 +R ++ + + E + +L YD +G + Sbjct: 614 PVRAAGDAHVVCVVKDVTER----VLYLRELERQAKYDGLTGLPNRYLLDDRLEQAIVAA 669 Query: 388 SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLL 447 + + L V I L + V G + ++++R+ R+A D +++ Sbjct: 670 RRHERLLGVAFIDLDHFKVVNDNVGHRQGDELLRQAASRLAAVLRDGDTAARQGGDEFVV 729 Query: 448 LCRE---NVQTFTRKIAMVNDFDSSFGYRN----LRIHKSAICEPLQGENAWSYAEKLKL 500 L + F + F + + P G + + + + Sbjct: 730 LLPDLGDERDAFRILGRLQAALAEPFRLDDRSFFVTCSIGVSLYPRDGGDGDTLLKHADI 789 Query: 501 AISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILG 560 A+ + + F ++ + + + +R A+E GEL L +QP VD + ++G Sbjct: 790 AMYQAKAAGRNVVRFFTAEMNIQVRDRLQLEGALRSALENGELHLAFQPQVDGGSGQVIG 849 Query: 561 AEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLL 620 AEAL RW E G + P++FI +AE+ G I +G +++ A + R + Q + Sbjct: 850 AEALLRWQHPELGAVPPVRFIPLAEETGLIGPIGEWVLRAACRQARQWEQAG---RRLRI 906 Query: 621 HINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGV 680 +NVS Q P R I+ E GL L +E+TE+++ E + +L++ GV Sbjct: 907 AVNVSARQFRSPDLPARIAEILDETGLPPALLELELTESMLMGDAEQAEEMLHRLKQLGV 966 Query: 681 RISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNRIPVI 738 +++DDFGTG S+ D++K+D F + IV I LA + VI Sbjct: 967 SLALDDFGTGYSSFAYLQRFPIDTLKIDQSFVRSMVAGVRGEAIVVAIIALAHSLGMRVI 1026 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 AEGVE+ R+L + GC + QGYL+ +P+P + + +G+ Sbjct: 1027 AEGVETPLQQRQLFEFGCDELQGYLFGRPVPAAEFPHAGR 1066 >UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG8_METSD Length = 950 Score = 604 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 122/465 (26%), Positives = 203/465 (43%), Gaps = 29/465 (6%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE------ 387 +A+ G+ I I+ K AE +++ L YD + I+ Sbjct: 483 QAVYDLHGNITRIEGAIQDISAQKVAE----SRIQHLAFYDSLTSLPNRQLFIDRLEHTL 538 Query: 388 ---SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 + ++ AV I L + + G D + +++++ RIA + + F D Sbjct: 539 AYSARTSKSGAVLFIDLDNFKTLNDTMGHDLGDMLLQQVAMRIAGCLRESDTVARFGGDE 598 Query: 445 YLLLCRE---NVQTFTRKIAMVND-----FDSSFGYRNLRIHKSAICEP----LQGENAW 492 +++L E N Q + +V++ F F + H SA Q Sbjct: 599 FVVLLHELSGNHQEAAAQARLVSEKILISFAHPFQFSGYEHHTSASIGVTLFDQQPTTVD 658 Query: 493 SYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVD 552 ++ LA+ + + F D I + + + ++R+ + E FL YQP VD Sbjct: 659 EILKRADLAMYQSKAAGRNVIRFFDPEMQALIADRVEMEEDLRNGLRNDEFFLCYQPQVD 718 Query: 553 INTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRA 612 N +LGAEAL RW + +RG+I P FI +AED G I +G ++ A + ++Q+ Sbjct: 719 -NQGRLLGAEALLRWRNPKRGMIPPSTFIPLAEDSGLIVSVGNWVMYAACKQLVLWAQQ- 776 Query: 613 SLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNI 672 L L +NVS QL + F ++ ++ G L +E+TE+++ E + Sbjct: 777 PLTSSLTLAVNVSAKQLRQMDFVDQIVEVLNVTGANPKRLKLELTESLMVNNIEDVIAKM 836 Query: 673 EQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLA 730 +L+ GV SIDDFG G S+L + D +K+D F D+ I R I L Sbjct: 837 TELKNIGVGFSIDDFGIGYSSLSYLKLLPLDQLKIDQSFVRDVLTDPNDAVIARTIIALG 896 Query: 731 RYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 + + VIAEGVE+ L GC QGYL+ KP+P +++ Sbjct: 897 KSLNLQVIAEGVETLSQREFLDNYGCDAYQGYLFSKPVPADEFER 941 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 604 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 107/474 (22%), Positives = 198/474 (41%), Gaps = 36/474 (7%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--- 388 ++ + +G+A + I E K AE ++ L YD +G ++ Sbjct: 231 ELVTVLDEQGEAVCLTGTIQDITERKRAE----EQIRLLAYYDALTGLPNRRFFLQQLEQ 286 Query: 389 ------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCC------- 435 ++ LAV + L + V G +++++ + R+ + Sbjct: 287 ALVFANRYDRMLAVLFLDLDRFKLVNDTLGHGVGDRLLQDVADRLLRCVRRGDCLARADE 346 Query: 436 -----DIVTFNADLYLLLCRE-----NVQTFTRKIAMVNDFDSSFGYRNLRIH--KSAIC 483 + D + ++ + +V R+I S + + + Sbjct: 347 ECPPSLVSRLGGDEFTIMLSDIEHFQDVAKIARRILEAVSVPYSLEGQEVFVSTSIGISL 406 Query: 484 EPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGEL 543 P A A+ ++ + + D++ + E I + + A++ E Sbjct: 407 YPFDATTASDLIRNADGAMYQAKEQGRNGYQIYDESMNAKALERIILESQLHKALKEEEF 466 Query: 544 FLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMG 603 + YQP V + ++G EAL RW S E G++ P +F+ +AE+IG + ++ +++ A Sbjct: 467 IVYYQPQVSNQSGRVVGIEALVRWNSKELGLVEPGRFLPLAEEIGLVIQIDQWVMREACR 526 Query: 604 EFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIER 663 + + + L IN+S Q + E T+++KE+GL L +E+TE V+ Sbjct: 527 QHKLWLDAGF--PPVTLAINISGQQFMKNELLETVTSVLKESGLDPGLLELELTEGVLMA 584 Query: 664 INEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GK 721 E ++ L+ GVR++IDDFGTG S+L D +K+D F DI Sbjct: 585 HTERTVKTLQALKGMGVRLAIDDFGTGFSSLSYLKRFPLDVLKIDRTFINDITTDPDDAA 644 Query: 722 IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 I ++A ++ VIAEGVE++ L K GC QGYL+ KP+P + + Sbjct: 645 ITLATIEMAHTMKLKVIAEGVETKPQLDFLTKNGCDMYQGYLFSKPVPSTELPR 698 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 604 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 101/454 (22%), Positives = 193/454 (42%), Gaps = 23/454 (5%) Query: 336 LKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESN------ 389 ++ G I I+E K E ++ L +D + +++ Sbjct: 772 VRDETGAISHYIGSFTDISERKVNE----ERIHFLAHHDSLTLLPNRLSLQSRLEKVFQE 827 Query: 390 ---NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYL 446 + +AV I + + + G + ++ ++ +R+ + D ++ Sbjct: 828 AFISQTQIAVMFIDMDHFKNINDTLGHHVGDMLLLEVARRLKNIMGNDDIVARLGGDEFV 887 Query: 447 LLCRENVQTFTRKIAMVND--FDSSFGYRNLRIH----KSAICEPLQGENAWSYAEKLKL 500 ++ + K+A + ++ N +H P G++ + + + Sbjct: 888 VVLSDTDHDRVAKVAEALRSGLNQTYLIDNKPLHSSPSIGISLFPTDGDSVEALMKNADM 947 Query: 501 AISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILG 560 A+ + + + F A + E I +R A+ EL L YQP VDI++ ++G Sbjct: 948 AMYRAKAAGRNNYQFFTAAMNTLVTERQQIETGLRQAIACNELLLYYQPQVDISSGQVVG 1007 Query: 561 AEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLL 620 EAL RW E G+++P +FI IAE+I I +G +++ A+ + + + + + Sbjct: 1008 VEALIRWQHPELGLVAPDRFIPIAEEIDMIIPIGQWVLENALAQLAEWRDKGA--KGLRM 1065 Query: 621 HINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGV 680 +N+S QL + ++ ++ L +L +EITE+V + E + +LR+ G+ Sbjct: 1066 AVNLSAHQLRKDTIVADIINVLTKHKLGKGALELEITESVAMQYPEQNAKLLAELRQHGI 1125 Query: 681 RISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVI 738 ++IDDFGTG S+L + D +K+D F DI I +A + V+ Sbjct: 1126 ELAIDDFGTGYSSLSYLKLLPLDRLKLDRSFVKDIESDPNDAAISAATISMAHELGLTVV 1185 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 AEGVE+E L +GC QGY + KP+ Sbjct: 1186 AEGVENEAQLVLLSGMGCDLVQGYYFSKPLAADD 1219 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 604 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 111/462 (24%), Positives = 200/462 (43%), Gaps = 25/462 (5%) Query: 329 STDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES 388 S I L+ G+ I+ I E K+AE + L +D + + + Sbjct: 561 SITSISPLRNDSGEITHFIANVEDINERKNAEAT----IEHLAYFDPLTDLPNRRMLQDR 616 Query: 389 ---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVT 439 + +A+ + L + V G + +++++ R + + Sbjct: 617 LELALRRSRRHGSNVALMYLDLDSFKHVNDSMGHPAGDLLLKEMAGRFSGVVRDDDVVCR 676 Query: 440 FNADLYLLLCRE-----NVQTFTRKIAMVNDFDSSFGYRNLRI--HKSAICEPLQGENAW 492 D + L+ + +V +K+ R + + P G + Sbjct: 677 LGGDEFALILHDIHQDQDVVPIAQKLIEAVAQPVPLDGREVVVTASIGIALFPRDGGDVK 736 Query: 493 SYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVD 552 + + +A+ ++ + F F + + I I + + +R+A E EL L YQP V Sbjct: 737 NLEKHADIALYHAKEEGKNTFRFYLEELNSTISTRIALEQGLRYAKERQELELHYQPKVC 796 Query: 553 INTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRA 612 + + + G EAL RW S + G++SP++FI +AE I +G +++TA + + ++ Sbjct: 797 VASGKVSGVEALLRWHSPDFGLVSPIRFIPLAEQTRLIIPIGEWVLRTACLQQVQWREQG 856 Query: 613 SLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNI 672 L + +N+S QL P ER I+ E G++ L +E+TE+ + + + Sbjct: 857 LL---LNMAVNLSAIQLKSPGLVERVAAIIDETGIQPEHLELELTESALVNNPDEVVQLL 913 Query: 673 EQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLA 730 E+LR G ISIDDFGTG S+L +K+D F D+ +G I R + DLA Sbjct: 914 ERLRTLGCSISIDDFGTGYSSLSYLKSFPVTILKIDRSFVRDLAHNSGDRAIARSVVDLA 973 Query: 731 RYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 + +AEGVESE+ L ++GC QG++Y +P+ Sbjct: 974 NNLDMKTVAEGVESEEQLTILQQIGCTYIQGFIYSRPVQADQ 1015 >UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2C0_METRJ Length = 703 Score = 604 bits (1558), Expect = e-171, Method: Composition-based stats. Identities = 119/455 (26%), Positives = 187/455 (41%), Gaps = 28/455 (6%) Query: 337 KIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESN------- 389 + +G A I + I K AE ++ + +D + E Sbjct: 238 RAADGRALRFIGTQIDITARKAAEG----QVAHMARHDGLTDLPNRALFYERLEIRLADL 293 Query: 390 --NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLL 447 N AV + L + V G + ++R + RI + D + + Sbjct: 294 HLNGGACAVLCLDLDRFKTVNDSLGHAAGDFLLRAVAHRIRAVLRADDMVARLGGDEFAV 353 Query: 448 LCREN-----VQTFTRKIAMVNDFDSSFGYRNLRI--HKSAICEPLQGENAWSYAEKLKL 500 L + +T ++ FG R L++ P G ++ + + L Sbjct: 354 LVADADDPARAETLAARLIAAVQAPIPFGKRRLKVGLSVGIAQAPSHGFDSETLFRRADL 413 Query: 501 AISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILG 560 A+ + + + A + R++R A+E EL L YQP V T +LG Sbjct: 414 ALHRAKTEGRNTHRVFEPAMDEAEAARRDLERDLRQAIEGDELILYYQPQVSTGTGRLLG 473 Query: 561 AEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLL 620 EAL RW RG++ P FI +AE+ G I LG +++ A E ++ + Sbjct: 474 FEALVRWEHPTRGLVPPNAFIPLAEESGLILPLGEWVLRAACREAARWA------HPLKV 527 Query: 621 HINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGV 680 +N+SP Q + ER I+ E GL L +EITET+I + +L+ GV Sbjct: 528 AVNLSPRQFQQADLPERVLAILTETGLAPTRLELEITETLIINDMARALGILRRLKAFGV 587 Query: 681 RISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIPVI 738 I++DDFGTG S+L D IK+D F G + + IVR + L R + V+ Sbjct: 588 SIAMDDFGTGYSSLATLQAFPFDKIKIDRSFVGHVEVSPQAAVIVRAVLGLGRSLGMSVV 647 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 AEGVE++ R L C +AQGYL KP P + Sbjct: 648 AEGVETDAQMRFLAAEACDEAQGYLISKPQPIERF 682 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 604 bits (1558), Expect = e-171, Method: Composition-based stats. Identities = 110/466 (23%), Positives = 202/466 (43%), Gaps = 31/466 (6%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE------ 387 ++ +G+ + I +I I + K AE N++L L YD +G +++ Sbjct: 586 TLVRNDDGEPQAIFAINTDITQRKSAE----NEILHLALYDSLTGLPNRRLLLDRLGHAL 641 Query: 388 ---SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 + N + A+ I L + + G D + ++R++ R++ + + D Sbjct: 642 AVSARNQRMGALLFIDLDNFKLLNDTLGHDMGDLLLRQVAPRLSSCVRESDTVARLGGDE 701 Query: 445 YLLLC-----RENVQTFTR----KIAMVNDFDSSFG----YRNLRIHKSAICEPLQGENA 491 ++++ ++ + T+ + + F F ++ Q + Sbjct: 702 FVVILMGDFGEDHDEALTQISTICERIRSAFIQPFNLDPYIHHITPSIGIALFNDQSQTT 761 Query: 492 WSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIV 551 ++ LA+ + + F D + + + + E E L YQ V Sbjct: 762 NELLKRADLAMYQAKASGRNAMRFFDPDMQAAMNARAILESELYKSWERNEFILHYQLQV 821 Query: 552 DINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQR 611 D +R I+GAEAL RW RG++ P +FI AE+ G I LG +++TA + ++ + Sbjct: 822 D--SRGIIGAEALVRWQHPRRGLLPPSEFIPQAEETGLILPLGEWVLETACNQLASWALQ 879 Query: 612 ASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLN 671 L +NVS Q +P F E+ +I+ G L +E+TE+++ + Sbjct: 880 -PETVQLNLSVNVSSLQFCQPDFVEQVISILDRTGANPQRLKLELTESILVHDMDDTIAK 938 Query: 672 IEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDL 729 + L+ +GV ++DDFG G S+L + D +K+D F D+ IVR I L Sbjct: 939 MMTLKARGVGFALDDFGIGYSSLYYLKRLPLDWVKIDRSFVRDVLTDNNDATIVRTILLL 998 Query: 730 ARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 A+ + VIAEGVE+ L GC QGYL+ +P+P +++ Sbjct: 999 AKSMGLAVIAEGVETGAQKDFLASHGCTAYQGYLFSRPLPLEQFER 1044 >UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H6_9PROT Length = 837 Score = 604 bits (1558), Expect = e-171, Method: Composition-based stats. Identities = 120/465 (25%), Positives = 220/465 (47%), Gaps = 29/465 (6%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE----- 387 I A+K EG E ++I + I K AE ++ +L YD + +++ Sbjct: 369 ITAVKDNEGVTTEYVAIFSDITLRKHAE----EEIYTLAFYDSLTKLPNRRHLLDRINQA 424 Query: 388 ----SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + +N Y A+ + + + + G D + + ++ +R+ + D Sbjct: 425 RSISARSNHYGALLFLDMDRFKILNDTLGHDYGDLFLVEVSRRMRNCVRDMDTVARIGGD 484 Query: 444 LYLLLCRE---NVQTFTRKIAMVND-----FDSSFGYRNLRIH----KSAICEPLQGENA 491 +++L E + + + K+A++ + + ++ H E+ Sbjct: 485 EFVVLIEEIGTDNEEVSTKVALIAEKIRAALTEPYLLKDKEHHSSPSIGVCLYLGNEESV 544 Query: 492 WSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIV 551 + LA+ ++ + F D A +E + ++RHA+ +L L YQ + Sbjct: 545 DTLLRHADLAMYQAKESGRNGVRFFDPAMQLAVETRAALEADMRHAVTGKQLRLYYQIQL 604 Query: 552 DINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQR 611 + LGAEAL RW+ RG++SP +FI IAE+ I E+G+ +++TA + +S+ Sbjct: 605 -TSDHRPLGAEALIRWMHPVRGLVSPAQFIPIAEESSLILEIGHWVLETACKQLVLWSKH 663 Query: 612 ASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLN 671 + + +L INVS Q N+ F + +T++ + L N L +E+TE+V+ Sbjct: 664 ERTR-NLILAINVSAQQFNKHDFVDTVSTLLHLHQLNPNRLKLELTESVVLSDVADVVSK 722 Query: 672 IEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDL 729 + L+ GV++++DDFGTG S+L ++ D IK+D F D+ +V+ I +L Sbjct: 723 MHALKALGVKLALDDFGTGYSSLSYLKQLPLDQIKIDRSFVSDVTTDPSDAVMVQTIINL 782 Query: 730 ARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 A R+ VIAEGVE+ED L + GC+ QG+L+ KPMP ++ Sbjct: 783 AHNFRMNVIAEGVETEDQLNFLKQNGCMAYQGFLFGKPMPIDEFE 827 >UniRef50_B4AX01 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AX01_9CHRO Length = 1409 Score = 604 bits (1557), Expect = e-171, Method: Composition-based stats. Identities = 116/442 (26%), Positives = 213/442 (48%), Gaps = 23/442 (5%) Query: 346 IISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII----------ESNNNQYLA 395 IIS+ I E K AE +L + +D +G ++ + N A Sbjct: 960 IISMAIDITERKQAE----EQLRHSVLHDGLTGLPNRTLLLDRVEQAIKRKQQQPNYLFA 1015 Query: 396 VGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE-NVQ 454 + I L + V G +++++ + ++ + F D +++L + + Sbjct: 1016 ILFIDLDRFKVVNDSLGHLVGDQLLKTIADKLQRCVRPTDTVARFGGDEFVILLEDLTIW 1075 Query: 455 TFTRKIA--MVNDFDSSFGYRNLRIHKSAICEPLQGENAW----SYAEKLKLAISSIRDH 508 T K+A + +F+SSF + SA + +A+ ++ Sbjct: 1076 TDATKMAQRITEEFESSFTLQEQEYFTSASIGITFCSSPEQTPSELVRNADIAMYRSKEA 1135 Query: 509 MFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWV 568 + + D + + + + N+R A+E E + YQPIV + R +LG EAL RW+ Sbjct: 1136 GRARYTMFDPIMHTQATQLLELETNLRLALEREEFIVYYQPIVSLMNRNLLGFEALVRWI 1195 Query: 569 SAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQ 628 E+G+ISP FI +AE+ G I LG +++ + + + + ++ ++ + +N+S Q Sbjct: 1196 HPEKGVISPANFIPVAEETGLIIPLGEWVLRESCRQMKAWQEQFIGAENLRVSVNLSGKQ 1255 Query: 629 LNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFG 688 L +P+ R I+ E GL+ +L +EITE+++ E + Q++ + +++SIDDFG Sbjct: 1256 LQQPNLINRIDNILTETGLEGKNLKLEITESMLMNNKEQVSELLLQMKAKKIQVSIDDFG 1315 Query: 689 TGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESED 746 TG S+L + + D++K+D F + G +IV I LA + ++ V+AEGVE+E Sbjct: 1316 TGYSSLSYLHYLPVDTLKIDRSFVSRMSQVGENFEIVEAIITLAHHLQMDVVAEGVETEQ 1375 Query: 747 VARELIKLGCVQAQGYLYQKPM 768 R+L +LGC QGY + KP+ Sbjct: 1376 HLRQLQQLGCEFGQGYFFSKPL 1397 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 604 bits (1557), Expect = e-171, Method: Composition-based stats. Identities = 110/528 (20%), Positives = 210/528 (39%), Gaps = 27/528 (5%) Query: 265 NALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLA 324 N FE Y G++L + L T + E+ Sbjct: 185 NPSFEAITGYDRGSVLGQ--NISILQSGRHDRRFYGKMWQTLLTAGKWQGEVWNRRKNGE 242 Query: 325 FLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMA 384 P + I A++ +G + + + + +K++E LL L +D + + Sbjct: 243 IYPQWVN-ISAIRTGDGQTESYVGVFTDLTRIKESE----ENLLYLSGHDALTELPNRLL 297 Query: 385 IIE---------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCC 435 + +++ +AV I+ L + + G + + ++ ++ R+ Sbjct: 298 FHDRLNQTLVESADSGSIVAVLIVDLDRFKVINDSMGHEVGDSLLCEVATRLRAICPAKA 357 Query: 436 DIVTFNADLYLLLCRENVQTFTRKIA---MVNDFDSSFGYRNLRIHKSAIC----EPLQG 488 + D + ++ Q + ++ + A PL G Sbjct: 358 TLARLGGDEFGIVLPNMTQNRDAALLAQEVLTRVAQPITISEVEFAVGASIGMTVYPLDG 417 Query: 489 ENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQ 548 E + A+ + + F F I + +R+A++ E L YQ Sbjct: 418 EKPSVLMRNAESAMYHAKQSGRNNFQFYRSELNTASLARILLESGLRNAVDRQEFLLFYQ 477 Query: 549 PIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHF 608 P +++ T ++G EAL RW E+G++SP +FI +AE+ G + +G +K A + + + Sbjct: 478 PQMELATGKLIGMEALIRWQHPEQGMVSPGEFIPLAEETGLVIPMGQWALKEACRQSKVW 537 Query: 609 SQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHF 668 + + + +N+S Q P F E + E+GL + L +E+TE++ E Sbjct: 538 MDQTGV--PLRISVNLSGIQFRLPDFTEMVMRTVGESGLPPHCLELELTESIAMGDVEET 595 Query: 669 YLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRII 726 + L + GV ++IDDFGTG S+L + D++K+D F + I+R Sbjct: 596 LEKLTILSRFGVLLAIDDFGTGFSSLSYLKKFPIDTLKIDQSFVRNCTRDPEDAAIIRAF 655 Query: 727 FDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 +LA + VIAEGVE + L + C + QGY Y +P+ ++ Sbjct: 656 INLAHSLNLEVIAEGVEHLEQLEFLAQESCDEIQGYFYGRPLSGDKFE 703 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 604 bits (1557), Expect = e-171, Method: Composition-based stats. Identities = 110/460 (23%), Positives = 193/460 (41%), Gaps = 22/460 (4%) Query: 331 DQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES-- 388 + ++ G I + I+ +K AE +D +G + + Sbjct: 626 SALSVVRHANGSVLYFIGQFSDISAVKAAEARALRLAC----FDPLTGLPNRSLLFDRLQ 681 Query: 389 ----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 AV L + + G + +++++ +R+ + + + D Sbjct: 682 EVLNREPHNGAVLFCDLDRFKNINDSLGHTLGDAVLKEVARRLVARVRPGDTVCRYGGDE 741 Query: 445 YLLLCR---ENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEK 497 ++L+ + V ++ D S L + P G + + Sbjct: 742 FVLVLPGLSDCVVLEQLAEQLLADVSSPILLDGLDLRVTPSLGVAVFPRDGNDCDALLRH 801 Query: 498 LKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 A+ + + + F + + E + I +R A+E GE L YQP VD+ Sbjct: 802 ADAALYHAKSRGRNTYRFFTREIDDRVSEYLHIEHGLRSALERGEFELHYQPQVDMAFGR 861 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 ++G EAL RW E+G+ISP++F+ IAE+ G I +G +I+ A + + + Sbjct: 862 VVGVEALLRWKHPEQGMISPVRFVPIAEETGLIVPIGMWVIREACRQAMLWRRAGL--RP 919 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK 677 + +N+S Q + E + ++GL L VE+TE+VI + Y +E LR Sbjct: 920 MTMAVNLSGRQFSRS-VIEAIDEALADSGLDPRWLQVEVTESVIMEDTQEAYTVLEALRA 978 Query: 678 QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRI 735 +G+ +++DDFGTG S+L D +K+D F DI IV I +A RI Sbjct: 979 RGLTVAVDDFGTGYSSLAYLKRFPIDKLKIDRSFIRDIDLDEDNPVIVDAIIGMAHNLRI 1038 Query: 736 PVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 V+AEGVE+ L + GC + QGYL +P P +A + Sbjct: 1039 KVLAEGVETRAQWDYLRQQGCDEVQGYLVSRPQPAAALGQ 1078 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 603 bits (1556), Expect = e-171, Method: Composition-based stats. Identities = 108/474 (22%), Positives = 198/474 (41%), Gaps = 32/474 (6%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE------ 387 ++ G ++ + I E K A + ++ L YD +G +++ Sbjct: 387 TPIRDLHGRVTGVLGVCRDITERKRA----AQEIERLAFYDALTGLPNRRLLLDRLQRSI 442 Query: 388 ---SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 ++ A+ I L + + G D ++++ ++ R+ + F D Sbjct: 443 ATCQRTHKLGALLFIDLDNFKDLNDTLGHDMGDQLLAQVATRLVASVRAADTVARFGGDE 502 Query: 445 YLLLCRENVQTFTRKIA--------MVNDFDSSFGYRN----LRIHKSAICEPLQGENAW 492 ++++ A ++ + F + Q + Sbjct: 503 FVVMLEALAPDLRTATAQAEMVADKLLASLNQPFALDGGQHYSTLSIGVTLFGEQRLSVD 562 Query: 493 SYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVD 552 ++ LA+ + + F D + + ++R + EL + YQP+VD Sbjct: 563 ELLKRADLALYQAKAAGRNTQRFFDPDMQAAVNARSNLEADLRQGLARAELLVYYQPVVD 622 Query: 553 INTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRA 612 + ++GAEAL RW +RG+I P FI +AE G I LG +++TA + + +SQ Sbjct: 623 -HQARLMGAEALVRWRHPQRGMIGPADFIPLAEQTGLILPLGQYVLQTACAQLQRWSQH- 680 Query: 613 SLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNI 672 + +NVS Q +P F + +K +G L +E+TE+++ E + Sbjct: 681 PDTAGLSISVNVSARQFRQPGFVAQVLHQLKSHGADPRRLKLELTESLLLGDIEDTIARM 740 Query: 673 EQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLA 730 QL+ +GV ++DDFGTG S+L + D IK+D F ++ IVR I LA Sbjct: 741 AQLKSEGVGFALDDFGTGYSSLSYLKRLPLDQIKIDQSFVREVLADPNDAAIVRTILALA 800 Query: 731 RYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW---DKSGKLVK 781 + + V+AEGVE+ L GC QGYL+ +P+P + + GK+ + Sbjct: 801 KSLDLQVVAEGVETTGQLSFLQLHGCEGFQGYLFGRPVPMEVFACAHRPGKMPQ 854 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 603 bits (1556), Expect = e-171, Method: Composition-based stats. Identities = 105/465 (22%), Positives = 197/465 (42%), Gaps = 30/465 (6%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE----- 387 I A+ G + + I E K AE ++ L +D + +++ Sbjct: 564 ISAVMSDNGTVSHYVGTHHDITERKIAE----ERIKELAFFDALTRLPNRTLLLDRLRQA 619 Query: 388 ----SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + N A+ I L + + G D+ + +++++ +R+A+ + + D Sbjct: 620 ITASARNEACGALLFIDLDHFKTLNDTLGHDKGDLLLQQVARRLADSVLESDTVARVGGD 679 Query: 444 LYLLLC------RENVQTFTRKI--AMVNDFDSSFGYRNLRIHKSAICEPL----QGENA 491 ++++ R+ T + ++ S + + SA + Sbjct: 680 EFVVVLGNLHKNRQEAANQTEAVGERILAVLGSPYHLGKIEYRTSASIGATVFRGHQASI 739 Query: 492 WSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIV 551 ++ LA+ ++ + F D + + + +R+A+E + L YQ V Sbjct: 740 DELLKQADLAMYKSKERGRNAVRFFDPDMQTVVVQRAALEAGLRNAIEDNQFLLHYQAQV 799 Query: 552 DINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQR 611 + GAEAL RW +RGI+ P +FI +AE+ G I LG +++ A + ++ R Sbjct: 800 --VGTRVTGAEALVRWQHPQRGIVPPAEFIPLAEETGLIVALGSWVLEAACAQLARWAAR 857 Query: 612 ASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLN 671 + +NVS Q + F + TI+ G + + L +E+TE+V+ + Sbjct: 858 -PDMAHLTIAVNVSVQQFRKADFVDNVLTIIGRTGARPDRLKLELTESVLVDNVQDIIEK 916 Query: 672 IEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD--IFGTAGKIVRIIFDL 729 + L+ +G+ ++DDFG G S+L + D +K+D F D + I R I L Sbjct: 917 MSALKAKGIVFALDDFGIGYSSLSYLKRLPLDQLKIDRSFVRDVLVDSNDAVIARTIVAL 976 Query: 730 ARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 AR + VIAEGVE+E L GC QGY + +P+P ++ Sbjct: 977 ARSLGLGVIAEGVETEAQRDFLAAAGCYAYQGYYFCRPLPIEDFE 1021 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 603 bits (1556), Expect = e-171, Method: Composition-based stats. Identities = 106/467 (22%), Positives = 203/467 (43%), Gaps = 31/467 (6%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNN 391 +I ++ + GD +++ I + K A K+ L YD + ++ Sbjct: 522 EIVSVAAQNGDLTHWVAVGRDITQRKAA----DEKIHHLAFYDPLTELPNRQLLL-DRLE 576 Query: 392 QYLA----------VGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFN 441 Q LA + I L + + G + + +++K+ R+ + + Sbjct: 577 QALADCTITRQEGVLMFIDLDNFKILNDTVGHSKGDLLLQKVAVRLKGCVRKLDTVARLG 636 Query: 442 ADLYLLLCRE---NVQTFTRKIAMVND-----FDSSFGYRNLRIHKSAICE--PLQGE-- 489 D ++++ ++ + TRK +V + + + + ++ P Sbjct: 637 GDEFVVMLQDLGTQPEAATRKAQIVAEKVLATLREPYDLAGYQHYSTSSIGVTPFNARQG 696 Query: 490 NAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQP 549 + ++ LA+ + + F D + N ++ ++R + + + YQP Sbjct: 697 SVSELLKQADLAMYQAKTMGRNTVCFFDPDMQASVSANAALSTDLRAGLREHQFLVHYQP 756 Query: 550 IVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFS 609 VD + I G EAL RW +RG++SP +FI +AE+ G I LG +++ A + + Sbjct: 757 QVD-REQRITGVEALLRWKHPQRGMVSPAEFIPVAEETGLILPLGQWVLEQACLQLAVWQ 815 Query: 610 QRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFY 669 +R + +NVS Q P F + +K G++ ++L +E+TE+++ E Sbjct: 816 KR-PETAGLSIAVNVSVRQFRHPDFVDMVMAAIKHTGIQPHNLKLELTESLLADRMEIAI 874 Query: 670 LNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIF 727 + L+ GV +++DDFG G S+L + D +K+D F D+F I I Sbjct: 875 AKMGTLKALGVTLALDDFGMGYSSLSYLKRLPLDQLKIDKSFIADVFSDPNDAAICSAII 934 Query: 728 DLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 LA+ + VIAEGVE+E L LGC QG+L+ P+P + ++ Sbjct: 935 SLAQSLGLDVIAEGVETEAQRSFLAGLGCGYYQGFLFCPPLPIAEFE 981 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 603 bits (1555), Expect = e-170, Method: Composition-based stats. Identities = 116/465 (24%), Positives = 208/465 (44%), Gaps = 29/465 (6%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------ 385 I A++ + +S+ + I+++K +E KL L +D + + Sbjct: 634 SISAVRNDKQQLTHYVSVYSDISKLKASEA----KLAHLAHHDPLTQLPNRTLLTINLSH 689 Query: 386 ---IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + N+ +A+ ++ L + V FG + +++++ +R+ + I Sbjct: 690 AIDLAVRNHHRIALLMLDLDRFKDVNDSFGHQIGDALLQEVARRLRRRVRISDTICRLGG 749 Query: 443 DLYLLLCR-----ENVQTFTRKIAMVNDFDSSFGYRN-----LRIHKSAICEPLQGENAW 492 D + +L +V+ F I + F N + P G+ Sbjct: 750 DEFTVLIEGNPALHDVEHFAEDI--LQLLKDPFSLPNGREVIIGASIGISLYPEHGQTPK 807 Query: 493 SYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVD 552 ++ A+ + H S F + D E+ + + ++ A+ + EL L +QP +D Sbjct: 808 ELLQQADAAMYRAKAHGRSCFRYFSDELTRAAEQRLDLEVRLQRALRLNELCLYFQPQID 867 Query: 553 INTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRA 612 I++ I+GAEAL RW G+ISP +FI +AE+ G I +LG ++ A + + + Q+ Sbjct: 868 ISSNRIIGAEALVRWQDPAHGLISPAQFIPVAEETGLIKQLGEWVLLEACRQGKEWQQKG 927 Query: 613 SLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNI 672 L +N+SP Q + E +K+ G A+ L +E+TE+ + + Sbjct: 928 L--PAINLAVNISPVQFRNSNILESVFNALKQTGYPASLLELELTESALMTHENEAVEIL 985 Query: 673 EQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLA 730 LRK G+R++IDDFGTG S+L D +K+D F DI +I I +A Sbjct: 986 SALRKYGIRLAIDDFGTGYSSLAYLKRFPLDVLKIDKSFVDDIPHKKDDMEIAAAIVAMA 1045 Query: 731 RYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 R+ V+AEGVE+E+ L + GC QGYL P+P +++ Sbjct: 1046 HTLRLKVLAEGVETEEQLTFLKEQGCDCYQGYLMSPPVPADQFEQ 1090 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 602 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 108/450 (24%), Positives = 192/450 (42%), Gaps = 24/450 (5%) Query: 341 GDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNN 391 G + + + ++K + L +YD +G + E ++ Sbjct: 363 GAVGHFVGVLYDVTQIKRYQ----EDLEHQANYDTLTGLANRNLLNERTQQALLQARRHD 418 Query: 392 QYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE 451 +L++ I L + V G ++++ + R+ + D ++LL Sbjct: 419 HFLSLVFIDLDNFKLVNDSMGHGAGDELIANVGSRLQTCVRDGDTVARIGGDEFVLLLTN 478 Query: 452 NVQTFTRK---IAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISS 504 + + + + R I P GE++ S A+ Sbjct: 479 QSVSDSNAGVMQRIQAELIKPMWIRGQEIVVTCSMGVARFPEDGEDSESLLANADTAMYR 538 Query: 505 IRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEAL 564 + + F F E + + ++ HA++ ELFLVYQP +D+ ++G EAL Sbjct: 539 AKSSGRNNFQFYTKEMNATSGERLSLESDLWHALKNDELFLVYQPQIDLRDGTVIGMEAL 598 Query: 565 CRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINV 624 RW +RG+I+P+ FI +AE G I +G +++TA + + IN+ Sbjct: 599 IRWQHPKRGLIAPMDFIPMAECNGLIIPIGIWVLETACRHNLQLQKEGL--PPIRVAINL 656 Query: 625 SPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISI 684 S QL++ +F E ++++ GL + L +E+TE+++ E + + L K G+++S+ Sbjct: 657 SARQLSDRNFVESVQSVIEAIGLDPHYLELEVTESMVMHNVEDVVVTLNDLNKMGIQLSL 716 Query: 685 DDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIPVIAEGV 742 DDFGTG S+L D +K+D F + G I + I LA +I VIAEGV Sbjct: 717 DDFGTGFSSLAYLKRFPIDRLKIDQSFIFNCDSDPGDAIIAQTIIALAHGLKIKVIAEGV 776 Query: 743 ESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 E + L K GC + QGY +P+ F Sbjct: 777 EKSEHLSFLKKNGCDEGQGYFISRPLTFDD 806 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 602 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 108/469 (23%), Positives = 206/469 (43%), Gaps = 29/469 (6%) Query: 329 STDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE- 387 I A++ +G ++ I K A S K+ +L +D + +++ Sbjct: 309 KNLTITAVRDGKGVVSNYVATFRDITTSKAA----SEKINNLAYFDPLTQLPNRRMLLDS 364 Query: 388 --------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVT 439 + +NQ+ A+ + L + + G D + +++++ R+ + + + Sbjct: 365 LRHVLTISARSNQHCALLFLDLDNFKTLNDTLGHDVGDLLLQQVATRLTDCVREGDIVAR 424 Query: 440 FNADLYLLLCRE--------NVQTFTRKIAMVNDFDSSFGYRNLRIH----KSAICEPLQ 487 D +++L + ++ + + R H Sbjct: 425 LGGDEFVVLLENLSLQAIEAANKAKKVAKKIIFELAQYYQLNMHRYHSTTSIGVTIFSGN 484 Query: 488 GENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVY 547 ++ +A+ + + + F + I + R++R A+E + L Y Sbjct: 485 ETGIEELLKQADIAMYQSKAAGRNTWHFFNKTMQESIIARADMERDLRKAIEDNQFQLHY 544 Query: 548 QPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRH 607 Q V ++ LGAEAL RW ERG +SP FI +AE+ G I +G ++ +A + + Sbjct: 545 QAQVS-SSGQTLGAEALIRWQHPERGQVSPFNFIPLAEETGLILPIGQWVLDSACAQLKA 603 Query: 608 FSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEH 667 + Q+ L D +L +N+S QL++ F E+ +K + + L +E+TE+++ Sbjct: 604 W-QKNPLTQDLVLAVNISAKQLHQEDFVEQVKATLKRHDINPARLKLELTESMLVENISD 662 Query: 668 FYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRI 725 + L K G+ S+DDFGTG S+L+ ++ + IK+D F D+ A IVR Sbjct: 663 IITKMNILSKIGISFSLDDFGTGYSSLQYLKKLPLNQIKIDQSFVRDLITDASDRAIVRT 722 Query: 726 IFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 I ++ I VIAEGVE+ + + L+ GC QGYL+ KP+P + ++ Sbjct: 723 IITMSHSLDISVIAEGVETVEERQYLLDNGCTHYQGYLFSKPVPINEFE 771 >UniRef50_B8GNC0 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GNC0_THISH Length = 655 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 108/458 (23%), Positives = 205/458 (44%), Gaps = 25/458 (5%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI-------- 385 ++ +G + ++ I E + + +L + YD +G + Sbjct: 187 NTVRNGQGQVEYFFALGLDITERRRTQA----QLEHIAHYDLLTGLPNRTLLQNRISHAL 242 Query: 386 -IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 + ++ +A+ + L + V G ++++R++ R+ + + + + D Sbjct: 243 DVARRRDRQVAILFLDLDRFKVVNDSLGHAYGDELLRQVSDRLRRRLREEDTLARWGGDE 302 Query: 445 YLLLCRENVQTFTRKIA---MVNDFDSSFGYRN-----LRIHKSAICEPLQGENAWSYAE 496 +++L E + ++ + + N + P G +A Sbjct: 303 FIVLVDEVDDPQGLSLLAEGILAELAEPYRLSNGQEVFVGGSIGISLYPQDGRSAEQLIM 362 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 K A+ +D S + F A + + + ++RHA+E E L YQP V Sbjct: 363 KADTAMYQAKDQGRSNYQFYTSALTLAANDRLALETSLRHALEREEFTLHYQPRVRTQDD 422 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 ++G EAL RW ++G+ +P FI +AE+ G I LG +++TA + + + + + Sbjct: 423 VMIGMEALVRWHHPDKGLTAPDAFIPMAEETGLITPLGLWVLRTACRQAQTWMRLYG--E 480 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +N+S QL +P + I+++ GL A+SL +E+TE+V+ + H + +L+ Sbjct: 481 PIHMAVNLSMRQLRQPDLVSQIDAILRDTGLPASSLELELTESVLMAGDGHTLTALAELK 540 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNR 734 GVR++IDDFGTG S+L + D++K+D F DI A I I +AR Sbjct: 541 ALGVRLAIDDFGTGYSSLAYLKRLPIDALKIDRSFVSDIPHDASDMAIASTIIAMARTLG 600 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 + V+AEGVE+ + L K GC QG+ + P+ A Sbjct: 601 LEVVAEGVETPEQLAFLKKEGCDSYQGFGFSPPVDAQA 638 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 106/472 (22%), Positives = 187/472 (39%), Gaps = 28/472 (5%) Query: 329 STDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE- 387 + A++ R G+ ++ I + K E + ++D + I++ Sbjct: 375 GEMTVTAVRTRAGETTHYVAAITDITKRKRDE----EHIRFQANFDMLTHLPNRHLIMDR 430 Query: 388 --------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVT 439 + + V + L + + +G +++++ +R+ + Sbjct: 431 LEQAMHQAQRTGRQVCVMFLDLDRFKQINDSYGHSAGDEVLKLTARRLRNCVRISDSVGR 490 Query: 440 FNADLYLLLCRENVQTFT---RKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAW 492 D ++++ ++ F + P GE A Sbjct: 491 LGGDEFIVILSNVEDQHAGAYIAEKILYSLSEPFPIGGTEVFCIPSVGITYFPDHGETAP 550 Query: 493 SYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVD 552 +A+ + + + + ++RHA+ E L +QP V Sbjct: 551 DLLRNADVAMYHAKQGGERRYAIFTPDMARRSLALLTMESDLRHALARDEFELHFQPKVR 610 Query: 553 INTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRA 612 ++GAEAL RW E+G+I+P FI +AE+ G I +G ++ A + Sbjct: 611 -ADLTLIGAEALIRWRHPEKGLINPGDFIPLAEESGLILPIGRWTLREACDRVMSWRAEG 669 Query: 613 SLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNI 672 + +NVSP Q + E I+ E GL+ +L +EITETV+ EH + Sbjct: 670 LTIP--SVSVNVSPRQFQDQTLVETVRQILVETGLEPEALDLEITETVMTGDVEHAVGTL 727 Query: 673 EQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLA 730 L+ GV +SIDDFGTG S+L D++K+D F D+ + IV I LA Sbjct: 728 RALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIALA 787 Query: 731 RYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD---KSGKL 779 R V+AEGVE + A L C QG+LY +P+P + + ++ KL Sbjct: 788 RNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSRPLPPAEFTTFLRTAKL 839 >UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=B1XZW3_LEPCP Length = 1069 Score = 602 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 104/462 (22%), Positives = 194/462 (41%), Gaps = 28/462 (6%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES----- 388 A++ R G + I + K++E ++ L +D + IE Sbjct: 592 NAVRDRAGHVSHWVCTSIDITDRKESE----RRIRFLAEHDVLTELPNRALCIERLRLAL 647 Query: 389 ----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 Q +AV I L + + G + ++R + QR+ + + D Sbjct: 648 QQARRTGQKVAVLFIDLDRFKNINDSLGHHVGDGLLRSVAQRLVDGVRAGDTVSRLGGDE 707 Query: 445 YLLLCRE--NVQTFTRKI--AMVNDFDSSFGYRNLRIHKS----AICEPLQGENAWSYAE 496 ++++ +++ + ++ G + IH S P ++ Sbjct: 708 FVVVLNGLADIEEVAHVVEQRLIPRVRQPHGVQGAEIHVSCSVGISVFPDDAQDIDELMR 767 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 + +A+ + + F + + + ++R A+ G+L L YQP + + Sbjct: 768 QADVAMYQAKAQGRNGAQFFTAEMNQRAQARLMVENHLRSAVAQGQLSLHYQPRIHVADG 827 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 + G E L RW S E G + P +FI +AE+ G I E+G +I+ A + + R Sbjct: 828 RVAGVEGLLRWHSPELGHVPPDRFIPVAEETGLIIEIGAWVIEAACAQIERW--RGQGLQ 885 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + + IN+S QL +P + ++ + + L +E+TE+++ + + + LR Sbjct: 886 EVAVSINLSALQLRDPGLLDVLRASLERHAVPPGQLELELTESILMDQVDAHLVTLHALR 945 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNR 734 + G+R+SIDDFGTG S+L D +K+D F D+ I++ I L Sbjct: 946 ELGLRLSIDDFGTGYSSLNYLTRFPIDQLKIDRSFVRDMLDDPRDLAIIKAIIGLGHTLG 1005 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM---PFSAW 773 + V+AEGVE E + L GC + QGY + +PM +AW Sbjct: 1006 LKVVAEGVERELEVQALRAAGCDELQGYHFARPMAADTATAW 1047 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 602 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 107/459 (23%), Positives = 195/459 (42%), Gaps = 24/459 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---- 388 I A+K +G + + + I E++ A ++L +D +G + + + Sbjct: 868 ISAVKDAQGKVAHYVGVFSDITELRRA----HDQLDHQAHHDPLTGLPNRLLLGDRLHKA 923 Query: 389 -----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + LAV I L + + G ++++ ++ R+ + + D Sbjct: 924 LQRAHRDETGLAVFFIDLDRFKNINDTLGHQVGDRVLCEVAWRLGRLMRESDTVGRLGGD 983 Query: 444 LYLLLCRE-----NVQTFTRKIAMVNDFDSSFGYRNLRI--HKSAICEPLQGENAWSYAE 496 +L++ + V KI V + P G +A + + Sbjct: 984 EFLIVIEDVGEPTAVSHIAEKILNVLQASPVTVEHEFFVGASIGISVFPQDGADAETLMK 1043 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 +A+ ++ + + F + + ++R A+E GEL + QP + T Sbjct: 1044 NADVAMYRAKERGRNTYEFFTKDLTQTSLARLQMETDLRRAIERGELRVYLQPQFSLATG 1103 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 ++GAEAL RW+ ++G++ P +FI +AE+ G I +G + TA ++ + Sbjct: 1104 KVVGAEALVRWLRPQQGLVLPGEFIKLAEESGLIVPIGEWVQGTAACQWATWVAAGLAPG 1163 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 +L +NVS + + ++ +GL A L +EITE+ I E+ ++ LR Sbjct: 1164 --VLSVNVSGVEFARGRIQQTARRTLELSGLPARFLELEITESAIMSHAENSVQVLDNLR 1221 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNR 734 G+ + IDDFGTG S+L + + +KVD F + I R + L + Sbjct: 1222 AMGISLVIDDFGTGYSSLAYLKRLPLNKLKVDQSFVRGLPNDTEDCAIARAVIALGHSLQ 1281 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 + VIAEGVE+E L GC + QGYL +PMPF + Sbjct: 1282 LTVIAEGVETEAQREFLTGEGCDEMQGYLRGRPMPFDDY 1320 >UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C8A1_ACAM1 Length = 1015 Score = 601 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 102/457 (22%), Positives = 198/457 (43%), Gaps = 24/457 (5%) Query: 338 IREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--------- 388 ++G A + I+++K AE +L YD+ +G ++ Sbjct: 276 DKQGQALGLEGFITDISKLKQAET----QLRHDAFYDKLTGLPNRSLFMDRLEYCIKRVK 331 Query: 389 -NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLL 447 + +Q AV + L + V G ++++ ++ +R+ + + D + + Sbjct: 332 RHPDQIFAVLFLDLDRFKVVNDSLGHAAGDQLLVEIAERLTACVRESDTLARLGGDEFTV 391 Query: 448 LCRENVQTFTRKIAMV----NDFDSSFGYRN----LRIHKSAICEPLQGENAWSYAEKLK 499 L E ++ + + + + F + + + ++ Sbjct: 392 LL-EGIKDLSDALLVCGRIQQSLNCPFNLNGREVLITVSTGVALSTMGYDDPEQLLHNAD 450 Query: 500 LAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAIL 559 A+ + +++ + + + ++R A+E E L YQPI + T AI+ Sbjct: 451 AAMYRAKALGKAQWEVFTADMHSNASAQLQLEVDLRRAIERQEFQLHYQPIFHLETAAIV 510 Query: 560 GAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFL 619 G EAL RW RG+ISP++FI +AE+ G I + + +++ A + + + L+ Sbjct: 511 GFEALLRWHHPLRGLISPVEFIPVAEETGLILPISWWVLQEACRQLSRWQTQFPLEVPLF 570 Query: 620 LHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQG 679 + +N S Q +E + I+ GL SL +EITE+ I E + +++ G Sbjct: 571 VSVNFSSKQFSEVGLIPQIEDILHTTGLAPQSLKLEITESAIMENAEATAAKLLEIKALG 630 Query: 680 VRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG-KIVRIIFDLARYNRIPVI 738 +++ IDDFGTG S+L + D +KVD F + +IV I L++ + + Sbjct: 631 IQLGIDDFGTGYSSLSYLHRFPVDILKVDRSFVSAMDSHENLQIVHTITMLSQNLGMRAV 690 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 AEGVE+ + A +L + C AQGY + KP+ S+ + Sbjct: 691 AEGVETAEQAAQLRAMNCQYAQGYFFSKPIDASSMEH 727 >UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Comamonadaceae RepID=A1WHK4_VEREI Length = 836 Score = 601 bits (1550), Expect = e-170, Method: Composition-based stats. Identities = 112/461 (24%), Positives = 195/461 (42%), Gaps = 29/461 (6%) Query: 335 ALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES------ 388 ++ +G + + I K AE ++ L YD +G +++ Sbjct: 366 PVQGADGTPRGYRGVGRDITGRKQAEG----QIERLAFYDALTGLPNRRLLLDRLQHATV 421 Query: 389 ---NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLY 445 +N A+ I L +++ G D + ++++ QR+ + + F D + Sbjct: 422 AVTRSNTQGALLFIDLDNFKSLNDTLGHDAGDHLLQQAAQRLKACVREVDTVARFGGDEF 481 Query: 446 LLLCRENVQTFTRKIA--------MVNDFDSSFGYRNLRIH----KSAICEPLQGENAWS 493 ++L + A + + H Q Sbjct: 482 VVLLAGLSAAAAQASAEAAQVAKHIAASLGQPYALGGAVHHSTPSIGIALFGPQACRVDE 541 Query: 494 YAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDI 553 ++ LA+ + + F D + ++R ++ EL L YQP+VD Sbjct: 542 LLKQADLAMYQAKAAGRNTQRFFDPEMQAAASHRSALEADLRRGLQQRELVLHYQPMVDG 601 Query: 554 NTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRAS 613 + GAEAL RW +RG++ P +F +AE G I LG +++TA + +S R++ Sbjct: 602 Q-GRLQGAEALVRWNHPQRGLMPPAEFTPLAEQTGLILPLGQWVLETACAQLVAWS-RSA 659 Query: 614 LKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIE 673 L F L +NVS Q + F ++ ++ +G L +E+TE+++ + ++ Sbjct: 660 LTRAFSLSVNVSVRQFRQADFVQQLLATLEASGANPERLTIELTESLLLNDVQDIIARMQ 719 Query: 674 QLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLAR 731 QLR G+ ++DDFGTG S+L + + D IK+D F D+ A G IVR I LA+ Sbjct: 720 QLRCHGLGFALDDFGTGYSSLSQLKRLPLDQIKIDRSFVRDLPADAGDGAIVRSILALAQ 779 Query: 732 YNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 + V+AEGVE+ L GC QGY + +PMP A Sbjct: 780 SLGLAVVAEGVETRAQLEFLQHHGCQTFQGYHFGRPMPPEA 820 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 601 bits (1550), Expect = e-170, Method: Composition-based stats. Identities = 108/453 (23%), Positives = 187/453 (41%), Gaps = 24/453 (5%) Query: 338 IREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI---------IES 388 G+ + + I K+AE ++ L YD +G Sbjct: 223 DANGNPLYTVPVIQDITRRKEAE----ERIRELAYYDSLTGLANRTLFNDRLDQVMARSR 278 Query: 389 NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL 448 A+ + L + V G + ++R+ +R+ E + + D ++++ Sbjct: 279 RRQSRFALMFLDLDRFKGVNDTLGHAVGDAMLRQAAERLNECLRENDTVARLGGDEFVII 338 Query: 449 CRE-----NVQTFTRKIAMVNDFDSSFGYRNL--RIHKSAICEPLQGENAWSYAEKLKLA 501 + N+ KI G R + P G+ A +A Sbjct: 339 LSDYKEDANLPRVADKILKALSSPFDLGVREVYSSTSVGIAIYPDDGDEATDLLRHADMA 398 Query: 502 ISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGA 561 + + ++ F F + + N+R A+E E F+ YQP +D+ T + G Sbjct: 399 MYAAKESGGDTFRFYSSEMNARAVSRMDMEANLRRALEQEEFFIEYQPQIDLITNKVAGV 458 Query: 562 EALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLH 621 EAL RW + G+I P +FI +AE+ I LG +++ + + Q L F + Sbjct: 459 EALLRWQHPQLGVIPPTQFIGLAEETNLILPLGEWVMRRVFEQCVMWKQEGYL--PFRVG 516 Query: 622 INVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVR 681 INVS Q +P F + ++ E G L EITE+V+ + + L +E L+K G+ Sbjct: 517 INVSGRQFVQPDFVDMVCRLLDETGAAPELLEFEITESVVMKDVDAAVLTLEALKKLGIN 576 Query: 682 ISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIA 739 ++IDDFGTG S+L + + +K+D F D+ A IV +A+ + V A Sbjct: 577 MAIDDFGTGYSSLSCLKHLPLNRLKIDKSFISDLQDNADDRAIVEATIAMAKRLELGVTA 636 Query: 740 EGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 EGVE+E + K C + QG+ + +P+ S Sbjct: 637 EGVETEGQYGFVQKRECDEVQGFYFSRPLSPSE 669 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 601 bits (1550), Expect = e-170, Method: Composition-based stats. Identities = 109/460 (23%), Positives = 200/460 (43%), Gaps = 24/460 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNN- 390 I AL+ +G +++ + I + K+AE +L L ++D + + S + Sbjct: 328 SISALRDEDGLLSNYVAVFSDITQRKEAE----ERLQFLANHDPLTRLPNRSRLTASLDE 383 Query: 391 --------NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + LAV I L + + FG ++++ ++ R++ + + Sbjct: 384 ALTRMDGEDGRLAVMFIDLDRFKLINDSFGHQVGDQLLCEIAIRLSRVVGERGMLARLGG 443 Query: 443 DLYLLLCR--ENVQTFTRKIA-MVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYA 495 D + LL ++ + ++ + P G +A + Sbjct: 444 DEFTLLMSGFDSHHQLADMASDILAALGKPLCLEAHEVFITGSIGISVFPHDGRDARTLL 503 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 + +A+ ++ + + F D + E + + +R A+E E L YQP + Sbjct: 504 KNADVAMYRAKEAGKNTYQFFDIGMNTQTFERLLLENGLRMALERHEFELHYQPQLSAGE 563 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 RA+ GAEAL RW + G++ P +FI +AE+ G I +G +++ A + + + Sbjct: 564 RALAGAEALLRWRHPQLGLVPPARFIALAEETGLIKPIGDWVLREACRQLAAWDAQGLRV 623 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 L +N+SP Q +P + ++ GL A L +EITE++I + + +L Sbjct: 624 P--RLAVNLSPRQFGQPSLPAKVAGALQAAGLAAGRLELEITESMIMQSPTEAVSLLSEL 681 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYN 733 + GV +SIDDFGTG S+L D++K+D F + I I +A+ Sbjct: 682 KSLGVWLSIDDFGTGYSSLSHLKRFPLDTLKIDQSFVEGLPDDDDNAAIAEAILAMAKKL 741 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 + V+AEGVESE+ A L GC QGY + +P+P + Sbjct: 742 KFQVVAEGVESEEQAAFLEGKGCHVLQGYHFGRPLPAGEF 781 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 600 bits (1549), Expect = e-170, Method: Composition-based stats. Identities = 109/469 (23%), Positives = 191/469 (40%), Gaps = 23/469 (4%) Query: 334 EALKIREGDAKEIISIKNSIAE---MKDAEIERSNKLLSLISYDQESGFIKNMAIIE--- 387 L+ R+ D I I+E K+ + +L ++ YD +G + + Sbjct: 237 TLLRNRQDDVTGIFLTCRDISENMRQKEDIAYKEMQLEQILHYDTLTGLPQRDFFFDLLH 296 Query: 388 ------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFN 441 NN+ LA+ + L + + G +++++++ QR+ ++ + Sbjct: 297 SHMVGCQKNNRTLALLYLDLDRFKNINDTLGHTVGDQVLQEVAQRLQNNIRITDNLSRMS 356 Query: 442 ADLYLLLCR-----ENVQTFTRKIAMVNDFDSSFGYRNLRI--HKSAICEPLQGENAWSY 494 D +L+ V +K V + + P + Sbjct: 357 GDEFLITLDPADNLSEVTQLAQKFLSVISVPMKIEHHRFHLTASIGISLFPGDATSPEKL 416 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 A+ ++ F F + + +W+ +R A+E +L L YQP D+N Sbjct: 417 LSCADSAMYRAKESGRDAFRFYKPHMNEKAQGLLWLETELRLAIEQEQLELHYQPQYDLN 476 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 T ++G EAL RW E+G+I P +FI AE+ I LG ++ TA + + Sbjct: 477 TGQLVGMEALVRWNHPEKGMIPPGEFIPQAEETSLIIPLGEWVLNTACRQIAAWHAMGI- 535 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 + +N+S Q + ++ GL A L +EITE+V+ E + + Sbjct: 536 -SPIRMAVNISAVQFYRIDLAQMVAKLLDHYGLPATLLELEITESVLMDDVEAAAETMNK 594 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD--IFGTAGKIVRIIFDLARY 732 L G+++SIDDFGTG S+L ++K+D F D I I I LA + Sbjct: 595 LTAMGIQLSIDDFGTGYSSLSYLKRFPISTLKIDRSFINDVTINEQDAAIALSIISLAGH 654 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVK 781 I V+AEGVE+ + L + C QGYL+ +P+P ++ K Sbjct: 655 MGIEVLAEGVETVEQLSFLQRHACQYGQGYLFNRPLPAKDIERQLKTAH 703 >UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5VXY3_SPIMA Length = 1092 Score = 600 bits (1549), Expect = e-170, Method: Composition-based stats. Identities = 117/460 (25%), Positives = 196/460 (42%), Gaps = 24/460 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNN- 390 I ++ EG I++K I + K E L +YD + I + Sbjct: 631 SICPMRDEEGYITHFIAVKEDITQQKHNE----EILAHQANYDALTDLPNRTLIFDRLRQ 686 Query: 391 --------NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + +AV I L + + G + + ++++ R+ + + Sbjct: 687 AITEAQVHHSNVAVMFIDLDHFKNINDTLGHELGDFLLKEAGMRLRGCIRKTDTVGRLGG 746 Query: 443 DLYLLLCR---ENVQTFTRKIAMVNDFDSSFGYRN----LRIHKSAICEPLQGENAWSYA 495 D +LL+ + VQ +++ F + P G+N + Sbjct: 747 DEFLLIIPKLDDLVQAEYIANQVLDVLGEPFNLCGEEAFISASIGIASYPQDGKNVSTLV 806 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 A+ + + + F F +E + I I +RHA+ EL +VYQP + +NT Sbjct: 807 RNADTAMYAAKQEGRNVFAFFTQNMNDEAQSRIIIENQLRHAISRNELSVVYQPFIHLNT 866 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 I+GAEAL RW + E G I P +FI IAE+ I +LG I+ A E ++ Q+ Sbjct: 867 SQIVGAEALMRWYNPELGNIRPDQFIAIAEESRLIVDLGEWILSQACQEVANWHQQG--N 924 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 + + +N+SP QL P+ + NGL ++ L +EITE + I+QL Sbjct: 925 NGLWVAVNMSPRQLRTPNLVNVIIEAIANNGLSSDCLELEITERSLVEEVPGVQSLIKQL 984 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKI--VRIIFDLARYN 733 +R++IDDFGTG S+L +K+D F D+ I V+ + +A Sbjct: 985 NHLKIRLAIDDFGTGYSSLSYLKRFPFSVLKIDKSFISDLPDDQDAIALVKTMITMAHGL 1044 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 + V+AEG+E+ L GC QGYL+ KP+P + + Sbjct: 1045 GLVVVAEGIETTAQLDFLCNQGCDYGQGYLFSKPLPPAQF 1084 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 600 bits (1549), Expect = e-170, Method: Composition-based stats. Identities = 101/443 (22%), Positives = 190/443 (42%), Gaps = 24/443 (5%) Query: 356 MKDAEIERSNKLLSLISYDQESGFIKNMAIIE------SNNNQY---LAVGIIKLCGLEA 406 M A+ + + +D + + E +N+ Q L V + L + Sbjct: 420 MAIAQKRVESIIRYQACHDALTHLPNRLLFDEQLALALANSKQQPELLGVAFLDLDRFKV 479 Query: 407 VEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR-----ENVQTFTRKIA 461 V G +++++++ R+ + C I + D + LL + + +I Sbjct: 480 VNDTLGHGIGDQLLQQVATRLKQCLRNCDTIARWGGDEFTLLFPHLTSTDEITKIAHRI- 538 Query: 462 MVNDFDSSFGYRNLRIHKSAICE----PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCD 517 ++ F N ++ +A P E+A + + A+ + + F Sbjct: 539 -LDKLSIPFVIDNQELYVTASLGIALCPYDAEDAQTLLKHADAAMYRAKKQGRNNFQVFA 597 Query: 518 DAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISP 577 + E + + ++R A+ E L YQP V+I+T I+G EAL RW G + P Sbjct: 598 EEMHREALNQLTLEADLRRALIKEEFLLYYQPQVEISTGKIVGLEALIRWQHPTLGFVPP 657 Query: 578 LKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHER 637 +FI +AE+IG I +G +++TA + + + + +N+S Q ++ Sbjct: 658 DQFIPLAEEIGLIAPIGQWVLQTACIQHQSWQAEGL--PPVRIAVNLSARQFHQSQLINI 715 Query: 638 FTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRF 697 ++ + L +EITE+ + E +++LR+ G+ I+IDDFGTG S+L Sbjct: 716 ILQTLETTEIDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITIDDFGTGYSSLNVL 775 Query: 698 YEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLG 755 +++K+D F DI + I + I L++ ++ V+AEGVE+ L + Sbjct: 776 KHFPLNTLKIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGVETPQQLSFLRSIH 835 Query: 756 CVQAQGYLYQKPMPFSAWDKSGK 778 C AQGY + P+P K + Sbjct: 836 CDLAQGYYFCPPVPAIEIAKLLR 858 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 600 bits (1549), Expect = e-170, Method: Composition-based stats. Identities = 104/460 (22%), Positives = 200/460 (43%), Gaps = 28/460 (6%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------- 385 I ++ +G +++K +I + K+ E +L+ ++D +G + + Sbjct: 339 ISPIRDDDGVVTHFMAVKENITQRKETE----QQLVHQATHDTLTGLPNRLLLEDRVHHA 394 Query: 386 --IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + + + + + L + V G +++++ + R+ + + D Sbjct: 395 IEVAKREGRRIGLMFLDLDRFKIVNDSLGHVAGDELLKVVSDRLRHTLRRSDTVARLGGD 454 Query: 444 LYLLLCRE-----NVQTFTRKIAMVNDFDSSFGYRNLRIH----KSAICEPLQGENAWSY 494 ++++ + KI+ D ++H P G+N + Sbjct: 455 EFVVVLTHFQSTTELAEVAEKISAA--LDEPVELSGHKVHVGASIGIAIYPDDGDNFNAL 512 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 + A+ + + F F D +E + + + +R A+ GE L YQP VD+ Sbjct: 513 MKDADTAMYRAKQKGRNTFCFYDSNMNDEALDRLKLEEALRRALVRGEFQLFYQPQVDLQ 572 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 T G EAL RW S ERG +SP FI +AE+ I+ +G+ +++ + + + + Sbjct: 573 TGRTSGVEALIRWNSPERGQVSPALFIPVAEESNLISMIGWWVLEESCRQIAAWREAGLT 632 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 + +NVS Q E + +M + + + L +E+TE+ + + + + Sbjct: 633 G--IKVAVNVSGRQFLNHALVECISDLMAQYAVLPSQLEIELTESTVMAEPDRAIEQLTR 690 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARY 732 LR+ G+++S+DDFGTG S+L + +IKVD F D+ IV I LA Sbjct: 691 LREIGIQVSVDDFGTGYSSLSYLKRLPLSTIKVDRSFVRDVNNQSDNAAIVSAILGLADA 750 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 + ++AEGVE+E + L GC++ QG+ Y KPMP Sbjct: 751 LDMSIVAEGVETEGEEQHLKDAGCIKVQGFRYAKPMPADQ 790 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 600 bits (1548), Expect = e-170, Method: Composition-based stats. Identities = 108/462 (23%), Positives = 196/462 (42%), Gaps = 27/462 (5%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI-------I 386 L+ I++I ++ E K AE +K+ L YD +G + + Sbjct: 584 TLLRDENDQPDAILAINTNVTERKAAE----HKVHQLAFYDPLTGLPNRELLGDRLQHAM 639 Query: 387 ESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYL 446 + + Q A+ +I L + + G + +++++ QR+ + + D ++ Sbjct: 640 QVRHGQVGALLLIDLDNFKTLNDTLGHAMGDLLLQQIAQRLQTCLRKGDTLARVGGDEFV 699 Query: 447 LLC------RENVQTFTRKI--AMVNDFDSSFGYRNLRIHKSAICEP----LQGENAWSY 494 ++ + + ++ ++ F F + H +A + Sbjct: 700 IVLEGLSASPGDAGSLATRVGEKILASFARPFQLADYVHHCTASIGITLFNDRPTTLDEL 759 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 ++ LA+ + H + F D A + + ++R A+ +G L YQ VD Sbjct: 760 RKRADLAMYQAKAHGRNALRFFDPAMQAVVAARAELEVDLREALRLGAFELHYQAQVDAR 819 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 + GAEAL RW +RG I+P FI +AE+ G I LG ++ A + +S+ Sbjct: 820 -GCVSGAEALLRWQHPQRGWIAPASFIPLAEETGLILPLGLWVLDVACAQLVAWSKM-PH 877 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 L +NVS Q + F + ++ +G L +E+TE+++ + L + Sbjct: 878 MARLSLAVNVSARQFRQADFAAQVLAAIERSGADPRRLKLELTESLMLDNLDDTILKMSA 937 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD--IFGTAGKIVRIIFDLARY 732 L+ G+ S+DDFGTG S+L + D IK+D F D I I R I L + Sbjct: 938 LKAHGIGFSLDDFGTGYSSLAYLKRLPLDEIKIDQSFVRDVLIDANDASIARSILALGQS 997 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 + V+AEGVE++ L + GC QGYL+ +P P ++ Sbjct: 998 LNLEVVAEGVETDAQHAFLAEHGCQAYQGYLFNRPQPARQFE 1039 >UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BF2_DECAR Length = 1038 Score = 599 bits (1546), Expect = e-169, Method: Composition-based stats. Identities = 118/465 (25%), Positives = 201/465 (43%), Gaps = 30/465 (6%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---- 388 I A++ + G+ +S I + K+AE ++ L YD + + E Sbjct: 569 ISAVRGQHGEITHFVSSFLDITKRKEAE----EQIQFLALYDPLTHLPNRRLLNERLSKA 624 Query: 389 -----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 ++ A+ I L + + G D + ++R++ R+ E + D Sbjct: 625 LTSSGRQRRHAALLFIDLDNFKMINDSMGHDIGDLLLRQVALRLRESVRSNDTVSRLGGD 684 Query: 444 LYLLLCRE---NVQTFTRKI-----AMVNDFDSSFGYRNLRIHKSAICEP----LQGENA 491 +++L E N+ T +I M++ + + H +A E Sbjct: 685 EFVILLEELSPNIHDATTQIEHIAQKMLDSLVQPYKFGEFSHHCTASIGAIPFMDATETI 744 Query: 492 WSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIV 551 S + +A+ + + F D A E+E + R++R A + L QP V Sbjct: 745 ESLLKSADMAMYKAKAAGKNRLFFFDPAMQTEVEARAALERDLRQAQREKQFVLYLQPQV 804 Query: 552 DINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQR 611 D + + GAEAL RW G+I P +F +AE+ I +G +++ A + + Q+ Sbjct: 805 D-QSGHVSGAEALIRWQHPTHGLILPGEFTHVAEETRLILPIGQWVLEEACKQLVIW-QK 862 Query: 612 ASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLN 671 L INVS Q P F + + E+G A+ L +EITE+++ + Sbjct: 863 NPDTAHLTLAINVSALQFRNPDFVDDVARAIHESGALASRLKLEITESLLLEDIDGTIER 922 Query: 672 IEQLR-KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFD 728 ++ L+ + GV +S+DDFGTG S+L ++ D IK+D F DI I + Sbjct: 923 MQVLKNQLGVGLSLDDFGTGYSSLSYLKQLPLDQIKIDRSFVKDIHCNPNDAAIAEAVIA 982 Query: 729 LARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 L R + VIAEGVE+ + LI GC+ QGYL+ +P P A+ Sbjct: 983 LGRSFSLNVIAEGVETIEQRDALIARGCLTFQGYLFGRPGPIDAF 1027 >UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=cellular organisms RepID=B0CAC5_ACAM1 Length = 901 Score = 599 bits (1546), Expect = e-169, Method: Composition-based stats. Identities = 99/432 (22%), Positives = 191/432 (44%), Gaps = 24/432 (5%) Query: 360 EIERSNKLLSLISYDQESGFIKNMAI---------IESNNNQYLAVGIIKLCGLEAVEAV 410 ++ + +D + + NN +AV + L + + Sbjct: 439 RQDKEEIIRHQAFHDALTDLPNRVLFNDRLNIALASAQRNNGSVAVMFMDLDRFKLINDT 498 Query: 411 FGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKI----AMVNDF 466 G +++++++ R+ + + + D + +L + +++ I +++ Sbjct: 499 LGHSIGDELLKEVALRLQDCLRDGDTVARWGGDEFTVLLPK-IESVNDAINTAYRILDAL 557 Query: 467 DSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLN 522 ++F R + P G+ A + +A+ ++ + Sbjct: 558 KAAFVIRRHELFVTTSIGIAIYPEDGQEAEILLQNADVALYRSKEQGRGTCQLYNPTMN- 616 Query: 523 EIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFIT 582 +E + ++RHA++ E L YQP V+I T I+G EAL RW E G++SP FI Sbjct: 617 -AKEQFILENSLRHALDRDEFILHYQPKVNICTGEIVGLEALVRWEHPEMGLVSPATFIP 675 Query: 583 IAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIM 642 IAE+ G I ELG +++TA + + + + IN+S Q +P+ E ++ Sbjct: 676 IAEETGLIVELGEWVLRTACQQAVLWHKLGL--APLSVAINLSARQFYQPNLVEIVAQVI 733 Query: 643 KENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINP 702 + GL L +EITET+ + E + L+ GV I++DDFGTG S+L ++ Sbjct: 734 ESTGLNPQQLELEITETIAVKNMEFAKSILCNLQALGVHIAMDDFGTGYSSLNYLKQLPF 793 Query: 703 DSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQ 760 +++K+D F D+ +I+ + L + + V+AEGV++E+ L L C Q Sbjct: 794 NTLKIDQSFIQDLKPASKDVEIINAVIALGKGLDLKVVAEGVDNEEQLELLRSLNCEIVQ 853 Query: 761 GYLYQKPMPFSA 772 GYL+ +P+ + Sbjct: 854 GYLFSRPLSVDS 865 >UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=uncultured bacterium 9F08 RepID=D2XIQ4_9BACT Length = 965 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 98/462 (21%), Positives = 186/462 (40%), Gaps = 28/462 (6%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES----- 388 A+ +G + I+E + +L YD+ +G + + Sbjct: 370 SAIDDEKGVVIGAVLTFRDISER----LSYEQELERRAHYDELTGLANRVLLKARLQQTT 425 Query: 389 ----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 + + +AV + L + V G D ++++ + QR+ + + D Sbjct: 426 AQAHRHGKSVAVLFLDLDHFKIVNDGLGHDCGDRLLVAIAQRLQTVVREADTVARHGGDE 485 Query: 445 YLLLCRE-----NVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYA 495 ++++ E + R+ ++ + P G + + Sbjct: 486 FVIVLSEPDNGEDAAEIGRR--LLQRIAEPVWIDEHELYTTASVGVSLFPRDGTDVDTLL 543 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 A+ + + F + + + + + +R A+E EL L YQP + Sbjct: 544 RNADAAMYRAKHLGRNNLQFYSEEMNLSLSKRLRMLSQLRQAVERNELCLHYQPQASLPG 603 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 +LG EAL RW E G++SP +FI +AE+ G I +G +++ A + + + + Sbjct: 604 GRLLGVEALVRWQHPELGMVSPAEFIPLAEESGLIEPIGEWVLREACRQGVAWDRAGFM- 662 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 + +N+S Q + P + ++++ GL L +E+TET + + + + Sbjct: 663 -PLRISVNLSARQFDNPKLDDTIRDVLEQTGLAPERLELELTETALIANPQQSVQRLSAI 721 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYN 733 R GVR+++DDFGTG S+L D IK+D F D IVR + +AR Sbjct: 722 RDLGVRLALDDFGTGYSSLAYLQRYTFDLIKIDRSFVADAIRNPGNAAIVRTVIAMARLL 781 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 IAEG E+ + L + GC QGY +P+P ++ Sbjct: 782 GSETIAEGAETAETITFLGRNGCDAVQGYYISRPLPAGEIEQ 823 >UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KCA9_AZOSB Length = 689 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 118/452 (26%), Positives = 215/452 (47%), Gaps = 24/452 (5%) Query: 340 EGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NN 390 G + ++ ++E+K AE +++ L +D +G + + + Sbjct: 231 RGQPASVGTVF-DLSEIKAAE----DRIRQLAYFDPLTGLPNRSLLEDRAGQVLVRAGRD 285 Query: 391 NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR 450 + + I L + V G ++++R QR+ + + D +++L Sbjct: 286 RRAATLMFIDLDRFKTVNDSLGHLMGDQLLRLAGQRLRDSVRLSDTVARLGGDEFIVLAP 345 Query: 451 ENVQTFTRKIA--MVNDFDSSFGYRNLRIHKS----AICEPLQGENAWSYAEKLKLAISS 504 + ++A ++ F + F + + S P G++ + + +A+ Sbjct: 346 DTGAEGAVRLAEKILEVFAAPFDLDDRELTISPSIGIARYPDDGKDFPALLQSADIAMYQ 405 Query: 505 IRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEAL 564 + + F I E++ + +R A++ G+L LVYQP+VDI + I+GAEAL Sbjct: 406 AKREGRNGFRMFSIEMNAPILESLLLETQLRRALDHGQLSLVYQPMVDIASGRIVGAEAL 465 Query: 565 CRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINV 624 RW + G ISP++FI +AE+ G I +G +++ A+G+ + + RA+ D ++ +N+ Sbjct: 466 LRWQHPQHGEISPVRFIPVAEESGLILPIGEWVLEQALGQVQRW--RAAGHPDLVMAVNL 523 Query: 625 SPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISI 684 S Q + ++ GL ++L +E+TE+V+ E + L +GVR+S+ Sbjct: 524 SALQFERLNISNTVLRLLDHYGLPGSALELELTESVLMEDAERAVAAMLNLADRGVRLSV 583 Query: 685 DDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIPVIAEGV 742 DDFGTG S+L + +K+D F +I A + R I DLAR + VIAEGV Sbjct: 584 DDFGTGYSSLAYLTRLPLAKLKIDRSFVRNIPSDASARSVARTILDLARSLALEVIAEGV 643 Query: 743 ESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 E+E L + C QAQGYLY +P+P A++ Sbjct: 644 ENEAQLLLLREWCCDQAQGYLYSRPVPARAFE 675 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 91/442 (20%), Positives = 178/442 (40%), Gaps = 20/442 (4%) Query: 348 SIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGI 398 ++ + + + ++ L YD + +++ + LAV Sbjct: 413 ALLEETTQRMNEQELNEQRIEYLAHYDTVTKLPNRFSLMARLGQALELAKRFSSRLAVIF 472 Query: 399 IKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR---ENVQT 455 I L + + G ++++ ++ R+ + + D ++++ N+ Sbjct: 473 IDLDRFKNINDSLGHHIGDRLLFQVAGRLQDTIRSADIVARLGGDEFVVVLPLINSNISA 532 Query: 456 FTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFS 511 + + + + P GE + LA+ + + Sbjct: 533 AHAVRKIQQTLSQGYTVESHELNITPSIGISVYPTDGETVQELMKNADLAMYHAKSAGRN 592 Query: 512 EFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAE 571 + F ++ + + ++R A+E E+ L YQP +D+ + ++G EAL RW Sbjct: 593 SYQFFTQEMNLTVQARLVLESDLRTALERDEMMLHYQPQIDLKSGEVVGVEALLRWRHPV 652 Query: 572 RGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNE 631 RG ++P FI +AED G I +G +K+A + + + + +N+S Q + Sbjct: 653 RGAVAPDVFIPVAEDTGLILSIGEFALKSACEQLALWISQGL--SPLRMAVNLSARQFKQ 710 Query: 632 PHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGL 691 + I+ G+ A+ L +EITE+ +++ LR+ GV ++IDDFGTG Sbjct: 711 SNLPSLLADILAATGVAAHLLELEITESSAMDDPNTAIVHLRTLREMGVELAIDDFGTGY 770 Query: 692 SNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVAR 749 S+L + +K+D F I + +I LA V+AEGVE+E R Sbjct: 771 SSLSYLKLFPVNRLKIDRSFVRGIDTDSEDAEIAAATIALAHNLGKEVVAEGVETEAQCR 830 Query: 750 ELIKLGCVQAQGYLYQKPMPFS 771 L C QGY + +P+ + Sbjct: 831 FLRGQQCDILQGYFFSEPLSAA 852 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 110/463 (23%), Positives = 197/463 (42%), Gaps = 25/463 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIK---------N 382 I A+ + G + I N + K + KL L YDQ + Sbjct: 589 SISAVYDQRGRITHYVGISNDLTATKQTQ----EKLEELTHYDQLTSLPNILLFRDRLQQ 644 Query: 383 MAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 +A+ I L + V G + ++ ++ QR+ ++ + I Sbjct: 645 AMARARREEHKVALLIFDLDRFKEVNDSLGHSVGDLVLTEVAQRLRQQLSLADTICRPGG 704 Query: 443 DLYLLLC---RENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYA 495 D + LL + ++ F F + ++ P GE S Sbjct: 705 DEFYLLLGRLTDIDTAVQAAQNVLELFSKPFQAADHQLYLTPSIGITLFPDDGEEVESLI 764 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 + ++ A+ + + F F + + + +R A+E+ E L YQP + + Sbjct: 765 QSVETAMYHAKKDGGNSFQFFQETMFTAALGRMTMKNRLRRAVELEEFELYYQPKIAADG 824 Query: 556 RAILGAEALCRWVSAERG-IISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 R ++GAEAL RWV ERG +SP +FI +AE+ G I +G +++ A + + Q Sbjct: 825 RTVVGAEALIRWVQPERGGPVSPAEFIPLAEETGLIIPIGEWVLRQACRQSLLWQQAGL- 883 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 + +N+S Q +P + I++E GL A L +EITE+++ + + Sbjct: 884 -PPLRIAVNLSAVQFKQPGLDDEINWILQEIGLPAELLELEITESLLMEDVTTANATLWK 942 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARY 732 L+ G+ +++DDFGTG S+L D++K+D +F D+ ++ I LA Sbjct: 943 LKDMGIHLALDDFGTGYSSLSYLKNFPLDTLKIDREFVRDLSTDDEDRAVIITIITLAHS 1002 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 ++ V+AEGVE D L + GC QGY + +P+P +++ Sbjct: 1003 LKMEVVAEGVEDADQVAFLRQRGCDVFQGYHFSRPLPAKEFEQ 1045 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 106/466 (22%), Positives = 219/466 (46%), Gaps = 29/466 (6%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE---- 387 I A+K G ++ + I K AE +++ SL +D +G +++ Sbjct: 665 AITAVKDARGVVINYVASLSDITLHKAAE----DEIRSLAFFDPLTGLPNRRLLMDRLQQ 720 Query: 388 -----SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 S + + A+ + L + + G D + +++++ QR+ + + Sbjct: 721 ALVASSRSGKAGALLFLDLDNFKNLNDTLGHDIGDLLLQQVAQRLKNCVREGDTVARIGG 780 Query: 443 DLYLLLCR----ENVQTFTRKIA----MVNDFDSSFGYRNLRIH----KSAICEPLQGEN 490 D ++++ E+++ ++ A +++ + + +H A + + Sbjct: 781 DEFVVMLEDLSAESIEAASQTEAVGWKIISTLNKPYHLEKFEVHSTPSIGATLFDSRPQI 840 Query: 491 AWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPI 550 ++ +A+ + + F D + + + ++R ++E E L YQ Sbjct: 841 IDDLFKQADIAMYQAKKAGRNTMRFFDPQMQDTLNTRTALEADLRKSIERREFNLFYQIQ 900 Query: 551 VDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQ 610 VD +GAEAL RW+ +RG++SP +FI +AE+ I +G +++ A + + + Q Sbjct: 901 VD-EMNRPVGAEALIRWIHPKRGMVSPAEFIPLAEETDLILNIGLWVLQEACAQLKTW-Q 958 Query: 611 RASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYL 670 L + +L +NVS Q + F + +++ + + L +E+TE++++ E L Sbjct: 959 NNPLTRNLVLAVNVSAKQFRQSDFATQVRVFVEKYAIDPSKLKLELTESMLQENIEDTIL 1018 Query: 671 NIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFD 728 + L++ GV+ S+DDFGTG S+L+ ++ + +K+D F D+ IVR I Sbjct: 1019 IMNALKEIGVQFSLDDFGTGYSSLQYIKKLPLNQLKIDQSFVHDLDFDRDDKAIVRAIIA 1078 Query: 729 LARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 +A+ ++ VIAEGVE+++ + L+ GC QGYL+ KP+P +D Sbjct: 1079 MAKSLQLDVIAEGVETQEQRQLLLNKGCTHFQGYLFSKPLPIREFD 1124 >UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID=Q89VU0_BRAJA Length = 955 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 108/465 (23%), Positives = 189/465 (40%), Gaps = 28/465 (6%) Query: 329 STDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES 388 S +I L + + + + E A+ ++ + +D + E Sbjct: 491 SDGRIIKLNHKRMELGGWVVTYEDVTERHKAQA----RVAHMARHDSLTDLPNRTLFREK 546 Query: 389 N---------NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVT 439 +AV L + V G ++++R + R+ E + + Sbjct: 547 MGEGLNQVAIAGGAMAVLCFDLDNFKTVNDRLGHAAGDRLLRWVAARLKENVGEHDTVAR 606 Query: 440 FNADLYLLLCR----ENVQTFTRKIAMVNDFDSSFGYRNLRI--HKSAICEPLQGENAWS 493 D + +L R ++ + R++ + +++ + P G +A Sbjct: 607 LGGDEFAVLQRGPQPQSAEKLARRLVEIIGHPPPLESQSIHVGVSVGIAIAPDHGLDADE 666 Query: 494 YAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDI 553 + LA+ + + + E + N+R A+E E LV+QP V + Sbjct: 667 LMKCADLALYQAKARGRGAYQLFEPEMEEEARSRHALEHNLRGALEAREFHLVFQPQVRL 726 Query: 554 NTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRAS 613 + + G EAL RW RG +SP +FI IAE+ G I +G +++TA + Sbjct: 727 ESSELTGFEALLRWKHPSRGFVSPAEFIPIAEENGLIVPIGEWVLRTACATAASW----- 781 Query: 614 LKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIE 673 D + +N+SP Q T+ + E GL L +E+TET + +E + Sbjct: 782 --PDVTVAVNLSPVQFRARGLAAMVTSALAEAGLPPQRLELEVTETALLDDSEATIEILH 839 Query: 674 QLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLAR 731 QLR GVR+S+DDFG G S+L + D IK+D F G + + IVR I L Sbjct: 840 QLRALGVRVSLDDFGVGYSSLSYLRKFPFDRIKIDRSFVGTLGESPESVAIVRTIASLGS 899 Query: 732 YNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKS 776 + AEGVE+E+ + + GC QGY + +P P + ++ Sbjct: 900 VLGVETTAEGVETEEQLDFVRECGCTAVQGYYFGRPCPAAEVART 944 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 599 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 104/460 (22%), Positives = 192/460 (41%), Gaps = 27/460 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---- 388 + + R+G I++ I+ K E ++ + +D + + +E Sbjct: 771 VNTVHDRQGTVTNYIALFTDISAQKSQE----QRIQHIAHHDALTNLPNRLLCMERLILA 826 Query: 389 -----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 N +++AV I L + + G + ++ R++ + D Sbjct: 827 LQQAHRNGRHVAVIFIDLDHFKNINDSLGHHVGDCVLVTAANRLSMGVRDGDTVSRLGGD 886 Query: 444 LYLLLCRE-----NVQTFTRKIAMVNDFDSSFGYRNLRIH----KSAICEPLQGENAWSY 494 ++++ + ++ + ++ + +H P G + + Sbjct: 887 EFVIILADIEDSHQIEEIMKH-RLLPLMRQPYDAGGYELHCSCSIGISIFPEDGLDKDTL 945 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 A+ ++ + + F + + + + I ++R +E EL L YQP +D++ Sbjct: 946 LRNADTAMYRAKEVGRNNYHFYTEELNSRAMQRLSIETSLRKGIERNELLLHYQPKLDLH 1005 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 T G EAL RW + G+ISP++FI IAE+ G I +G Q+I+ A + +S Sbjct: 1006 TGKPYGLEALLRWQHPDHGMISPMEFIPIAEETGLIIPIGKQVIRNACRQLSRWSSVG-- 1063 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 L +NVS Q + F E +++E G+ + + +E+TET++ +E Sbjct: 1064 MSHICLSLNVSAVQFRDRRFVEDLVQLVREEGVSPHRIELELTETMLMEDAVRTIRVMET 1123 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARY 732 L+ +G SIDDFGTG S+L + D +K+D F + I++ I L Sbjct: 1124 LKDEGFLFSIDDFGTGYSSLNYLHRFPIDCLKIDRSFIRGMLERPADLAIIKAIIGLGHT 1183 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 + VIAEGVE ED R L GC QGY +P+ Sbjct: 1184 LDMQVIAEGVEKEDEYRALRAAGCDGIQGYFVARPLTPEQ 1223 >UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium RepID=B0UQT2_METS4 Length = 797 Score = 599 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 110/462 (23%), Positives = 179/462 (38%), Gaps = 38/462 (8%) Query: 345 EIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI-------------IESNNN 391 ++ + AE + L +D +G + ++ Sbjct: 339 HLVVAVRDQRDRLRAEAA----ITHLAHHDALTGLANRLRFNGVLAELLAERFAARRHDP 394 Query: 392 QYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE 451 A+ I+ L +AV G + ++R++ QR+ + D + +L Sbjct: 395 APFALLILDLDRFKAVNDTLGHGMGDDLLRRVAQRLLRVVGAADVVARLGGDEFAILLAG 454 Query: 452 NVQTFTRKIAM---------VNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKL 498 + F + P G+ Sbjct: 455 AGDAAGAGDLAAIQAAAERAIEILSRPFVIDGHILDIGASIGIALAPQDGDTPEQLLRSA 514 Query: 499 KLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAI 558 LA+ ++ F + ++ + ++R A+ E L +QP VD T Sbjct: 515 DLALYGAKEEGRGRFRMFEGTMNARMQARRSLELDLRRALARQEFELYFQPQVDARTGRF 574 Query: 559 LGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDF 618 GAEAL RW ERG++SP +FI +AE+ G I LG +++TA E R ++ Sbjct: 575 DGAEALIRWHHPERGLVSPGEFIPLAEETGLIGPLGEWVLRTACAEARRWA------TPL 628 Query: 619 LLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQ 678 + +N+SP Q +P I+ E GL + L +EITE + + + +LR Sbjct: 629 PVAVNLSPVQFRDPRLAATVRGILAETGLPGSRLEIEITEGTLMQDEHRTLAVLTELRGL 688 Query: 679 GVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIP 736 G+RIS+DDFGTG S+L D IK+D F IVR I L R I Sbjct: 689 GIRISMDDFGTGYSSLSYLRRFPFDKIKIDQSFVRQTPQDRDSVAIVRAIAMLGRSLGIK 748 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 AEGVE++ + + GC Q QGYLY +P+P + + + Sbjct: 749 TTAEGVETDQQSVFIAGEGCDQLQGYLYSRPVPAESIAELFR 790 >UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39WZ5_GEOMG Length = 739 Score = 599 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 115/465 (24%), Positives = 204/465 (43%), Gaps = 32/465 (6%) Query: 339 REGDAKEII-SIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--------- 388 GD +I SI I E K AE +L L +D +G + ++ Sbjct: 278 HGGDESSVIWSICRDITERKHAE----EQLYRLAHHDTLTGLPNRILFMDRLQQAKALAN 333 Query: 389 NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL 448 +AV + L + + G + +++++ RIA + + D + ++ Sbjct: 334 RYRYQVAVLFLDLDRFKIINDTLGHPVGDHLLQQVAHRIAGCVREVDTVARIGGDEFTII 393 Query: 449 CR-----ENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLK 499 E+V+ +KI + + F + P G+N +K Sbjct: 394 LVNVDTVEDVKRMGQKI--LKTLAAPFNIDTHELFVTASIGISLFPSDGDNLDQLVKKAD 451 Query: 500 LAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAIL 559 +A+ ++ + F ++ + + ++R A++ E + YQP VDI ++ I Sbjct: 452 IAMYCVKGEGRNNVQFYSPQMDANADKRLLLETSLRKALDNREFRVYYQPKVDIVSKRIT 511 Query: 560 GAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFL 619 EAL RW G++SP +FI +AE+ G I +G +++ A + + ++ Sbjct: 512 AMEALIRWDHPILGLVSPGEFIPLAEETGLIIPIGEWVLRAACFQNCEWVRQGI--PPMR 569 Query: 620 LHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQG 679 + +N+S +Q + + E I+ E GL A+ L +EITE+VI + + + QLR G Sbjct: 570 VAVNLSGYQFQQKNLLETIRGILDETGLTADLLELEITESVIMQNPDFAVSVLNQLRDLG 629 Query: 680 VRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPV 737 V ISIDDFG G S+L + +++K+D F D+ + I I + + V Sbjct: 630 VHISIDDFGIGYSSLAHLKRFSVNTLKIDKSFVRDVEINSADAAIATAIIAMGNSLNLKV 689 Query: 738 IAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE 782 IAEGVE+E L C + QGYL+ PMP +K + ++E Sbjct: 690 IAEGVETEGQLSFLSDNKCDEVQGYLFSTPMPP---EKVAEFMRE 731 >UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U882_9DELT Length = 958 Score = 599 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 104/458 (22%), Positives = 200/458 (43%), Gaps = 24/458 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--- 388 I +++ +G+ +++ + I++MK E +L + +D +G + +++ Sbjct: 490 SISSIRDDDGEIANYVAVFHDISDMKHKE----EQLAHHLYHDGLTGLPNRVLVLDRLSM 545 Query: 389 ------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 +AV + L + + FG + + +++ + +R+ Y + Sbjct: 546 ALSHANRTGTKVAVLFLDLDNFKKINDSFGHAQGDTLLKAVAERLVALYRDEDTVARQGG 605 Query: 443 DLYLLLC---RENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYA 495 D +L++ E + + F+ F + + P G++ S Sbjct: 606 DEFLVVVVDVHEEREVVDLAEGLQRVFEEPFVIKGQEVFITPSIGVTLYPDDGQDPASLV 665 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 + +A+ + + + I + + + ++R A++ E + +QP VD+ + Sbjct: 666 KNADMAMYQSKAKGRNSYFLFTQQMSERIAQRLTLESDMRRALKEREFTVYFQPKVDLAS 725 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 + G EAL RWV + I+SP FI +AE+ G I LG ++ + + Sbjct: 726 GEVSGLEALVRWVKPDGIIVSPEDFIPMAEETGLIVPLGEFVLDASCKAMQVLQ--GVGC 783 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 + +N+SP Q + E ++ NGL A+ L +EITE+ + + + +L Sbjct: 784 SALTVAVNLSPIQFGQEDLVEMVVANLERNGLPASRLELEITESTLMTDVQSSVAQLNRL 843 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD--IFGTAGKIVRIIFDLARYN 733 + G+ ISIDDFGTG S+L ++K+D F D I + KIV + +AR Sbjct: 844 VELGITISIDDFGTGYSSLYYLKNFPISTLKIDRSFIRDITIDDSDAKIVETVVLMARTM 903 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFS 771 I V+AEGVE+++ L GC QGY Y +P+P Sbjct: 904 GIGVVAEGVETKEQLDLLATFGCATVQGYYYSRPLPLE 941 >UniRef50_D2LYI1 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LYI1_BACS4 Length = 774 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 130/555 (23%), Positives = 238/555 (42%), Gaps = 26/555 (4%) Query: 237 IIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIII 296 I+ G + I+S Y +P + I P ++ + + + Sbjct: 225 IMNKQSGYEHTINSEGNAYYASYQYIPEL-EWGIIAQIPESSIYDQLRDFRSSIWNMALF 283 Query: 297 VLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEM 356 V++ + T R+ L + + + + + L + D E+ ++ EM Sbjct: 284 VIVSITFFTYIYARKTLEPFVNLYDAVDKVAEGNYT-KTLDVNVKDYPEMKNLIVRFNEM 342 Query: 357 KDAEIERSNKLLSLISYDQESGFIKNMAIIE---------SNNNQYLAVGIIKLCGLEAV 407 + ++ ++D +G I + N+Q LA+ + L + + Sbjct: 343 VHNFNQSRKEVEYRANHDILTGLPNRYHIEQLLEQEIVTCDENDQSLALMFMDLDRFKIL 402 Query: 408 EAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR----ENVQTFTRKIAMV 463 G ++++ + R+ + + C + D +L+L + E V +KI + Sbjct: 403 NDTMGHQIGDQLLIQTAIRLQQHVCENCTVGRLGGDEFLILSKDASIEKVSNIAKKI--L 460 Query: 464 NDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDA 519 D + F + P G+ + A+ +++ + + F Sbjct: 461 KDMANPFIINSKEFFTSPSIGISVYPKDGQTKDDIIKHADTAMYVAKENGGNNYQFYTPE 520 Query: 520 KLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLK 579 N + + I ++R A++ E L YQP VD+ + ++G EAL RW + G+I P+ Sbjct: 521 PTNLLSKKYIIENDLRKALKNEEFLLYYQPQVDLKSGDLVGLEALIRWQHPKLGLIPPMD 580 Query: 580 FITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFT 639 FI IAE+ G+IN +G +IK A + + + Q S + +NVSPWQ + +F E Sbjct: 581 FIPIAEETGYINHIGKWLIKEACRQNKQWQQNGSFY--IPVAVNVSPWQFRDKNFVENIK 638 Query: 640 TIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYE 699 + E L L +EITE++ + Q+++ G++++IDDFGTG S+L + Sbjct: 639 AALDETNLDPKYLELEITESM-MHHFIDTIDKVHQVKEMGIKVAIDDFGTGYSSLNAIDQ 697 Query: 700 INPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCV 757 + D++K+D F D+ IV+ I DL + IAEGVE E+ A L CV Sbjct: 698 LPIDTLKIDRSFIRDMITNDSKAAIVKTIIDLGNNLHLNTIAEGVEYEEQATFLANQDCV 757 Query: 758 QAQGYLYQKPMPFSA 772 +AQGYL+ KP+P Sbjct: 758 KAQGYLFSKPLPPEQ 772 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 101/462 (21%), Positives = 191/462 (41%), Gaps = 29/462 (6%) Query: 331 DQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES-- 388 + I A+ G + I I E +A+ +L L YD + + + Sbjct: 362 ESIVAVYDEAGAIRYFIGSFRDITEQVEAQRH----ILRLAHYDVLTDLPNRVLFQDRLE 417 Query: 389 -------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFN 441 +++ A+ + L G + V G + +++++ R+ I Sbjct: 418 RAVVHALRHDRQAALLFLDLDGFKKVNDTMGHRAGDDLLKEVAVRLRGCVRMTDTIARLG 477 Query: 442 ADLYLLLCRE-----NVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAW 492 D + ++ E + KI + + + P+ G + Sbjct: 478 GDEFTVILDEISAANDASMVADKI--LASLHAPIFIDGRDVFIGTSIGISLFPIDGTSGD 535 Query: 493 SYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVD 552 + A+ + F F E + + +R A+E G+ + YQP + Sbjct: 536 ELLKHADTAMYQAKAAGKGRFNFYSAEMTKREEHRLELETALRQAVEEGQFQVHYQPQKN 595 Query: 553 INTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRA 612 + T + G EAL RW G+ISP+ FI +AE++ I+ + +++ A + R + + Sbjct: 596 LATNRVSGFEALVRWQHPRLGMISPVDFIPLAEEMHLIDRIDMFVMRQACRKGRQWRDQG 655 Query: 613 SLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNI 672 D + +N+S + E+ ++++ G A +L +EITE+ + + + Sbjct: 656 Y---DICMAVNLSGVNFSRDDLPEQVRQVLEDTGFPAENLELEITESFVIDLEVDQREVL 712 Query: 673 EQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKI--VRIIFDLA 730 ++LR GV+++IDDFGTG S+L + +++K+D F DI + + V I +A Sbjct: 713 QRLRALGVKLAIDDFGTGYSSLSYLKRLPVNTLKIDRSFVRDIARDSRDMMLVSSIIGIA 772 Query: 731 RYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 + V+AEG+E D L+ C + QGYL KPMP Sbjct: 773 HSLGLKVVAEGIEERDQLAILLSQECDEIQGYLIAKPMPAEQ 814 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 103/470 (21%), Positives = 202/470 (42%), Gaps = 24/470 (5%) Query: 322 TLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIK 381 + F+ + Q + + + + + + K E ++ L YD +G Sbjct: 256 SFDFVQQADKQRIHVAVFFPETGYFAFLMEDVTQRKVNE----EQIRRLAYYDNLTGLPN 311 Query: 382 NMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYA 432 +++ + + + + L + + G ++++ ++ R+ + Sbjct: 312 RALLMDRLEQMLTKARRDKTRVVLLFLDLDRFKVINDTMGHAHGDQLLVQVANRLRQALR 371 Query: 433 QCCDIVTFNADLYLLLC-----RENVQTFTRKIAMVNDFDSSFGYRNL--RIHKSAICEP 485 + D +++L + NV + + R++ P Sbjct: 372 SSDTLARIGGDEFVVLFTLEGPQLNVSPLAQHLIDSITSVYPISGRDVYASTSIGIATFP 431 Query: 486 LQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFL 545 G + S +A+ + ++ + F + + + N+RHA+E E FL Sbjct: 432 DDGGDCNSLLRCADMAMYAAKEGGGKGYHFYSPEMNLKAHARMEMETNLRHALEREEFFL 491 Query: 546 VYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEF 605 +QPIV+ ++GAEAL RW E+G+I P FI +AE+ GFI LG +++TA + Sbjct: 492 EFQPIVNARDGRLVGAEALLRWSDPEKGLIMPDMFIQVAEESGFIVPLGEWVLRTACRKM 551 Query: 606 RHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERIN 665 + + + F + +NVS Q + +F + +I++E G+ + L +E+TET + Sbjct: 552 KDWREAGL--PPFRISVNVSGRQFCQANFTDTVCSIIRETGMDPSFLALEMTETSLMVDV 609 Query: 666 EHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIV 723 E + QL++ + I IDDFG G S+L + D IK+D F D+ IV Sbjct: 610 EATAKALMQLKELDISIVIDDFGAGYSSLGYLQKFPIDRIKIDRSFIRDLSSHANDKAIV 669 Query: 724 RIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 I +A ++ V+AEGVE+ + L + GC + QG+ + +P+ + Sbjct: 670 EAIIAMAARLKLQVVAEGVETSEQLDFLKEQGCHEIQGFYFHRPLSEELF 719 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 116/469 (24%), Positives = 209/469 (44%), Gaps = 29/469 (6%) Query: 328 DSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE 387 T + E + + I + K AE +K+ L YDQ +G ++E Sbjct: 442 QWTMITAVISDHEDEIINYVITLIDITQRKAAE----SKIKQLAFYDQLTGLPNRQLLME 497 Query: 388 ---------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIV 438 N QY A+ + L + + G D +K + + QR+ + + + Sbjct: 498 RLESARLNSQRNGQYGAILYLDLDDFKTLNDTRGHDTGDKFLTLVSQRLLDCVRRTDTVA 557 Query: 439 TFNADLYLLLCRE---NVQTFTRKI-----AMVNDFDSSFGYRNLR----IHKSAICEPL 486 D ++++ + ++ +++ +++ + N+ + Sbjct: 558 RIGGDEFVIILEQLDSDLDIASKRADLLCRKILDTLSKPYYIDNIEHFSTLSIGVTLFLG 617 Query: 487 QGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLV 546 + + + LA+ + + F + ++ E+ +A +IRHA+ E L Sbjct: 618 ETKGIDELLKHADLAMYQAKGAGRNTHRFFNPEMQAKVLEHAAMANDIRHALTRNEFTLY 677 Query: 547 YQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFR 606 YQP V + + GAEAL RW ++G ISP++FI IAE+ G I LG ++ A Sbjct: 678 YQPQV-THDGQLTGAEALIRWQHPKQGTISPIEFIPIAEETGLILPLGEWVLDQACQVLA 736 Query: 607 HFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINE 666 + Q + L D +L IN+S Q ++ F ++ ++ + L +E+TE+++ E Sbjct: 737 VW-QNSPLTDSLVLAINISAKQFHQTGFVQQVLEALQRYRANPDRLKLELTESMLHEDLE 795 Query: 667 HFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVR 724 + QL+K GV S+DDFGTG S+L + D +K+D F D+ + I R Sbjct: 796 DTITKMSQLKKYGVSFSLDDFGTGYSSLNYLKRLPLDQLKIDKSFVRDLLTNSHDADIAR 855 Query: 725 IIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 I LA+ + VIAEGVE+++ L GC+ QGYL+ +P+P A+ Sbjct: 856 TIVSLAKSMNLAVIAEGVETQEQRLALASYGCLDFQGYLFSRPVPLEAF 904 >UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFK1_HAHCH Length = 1092 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 101/459 (22%), Positives = 206/459 (44%), Gaps = 25/459 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------ 385 ++ + +GD ++I N + E I+ +L YD +G + Sbjct: 477 KVAPVTDAKGDVTHFVAILNDVTES----IQYQAQLEYKTKYDNLTGLPNRNLLNDRIQQ 532 Query: 386 ---IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + N+ A+ + L + + G + ++++ ++ + + + + Sbjct: 533 AIAYAARRNKGFALAVFDLDNFKYINDSMGHETGDQLLTEVAESLRSCLREGDTLARLGG 592 Query: 443 DLYLLL-----CRENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAIC--EPLQGENAWSYA 495 D +++L C + +I + + + + S P GE+A + Sbjct: 593 DEFVILMHKEECDRPLGLMLNRIQQLVSQPRRLKDKEILVTPSIGVCQFPEDGEDASTLL 652 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 + A+ ++ + I++ + + +++R +E GEL L YQP +D + Sbjct: 653 KNADTAMYKAKERGRNRICSYTQEMNESIQKRVQMEQDLRRGIENGELELYYQPQLDPHG 712 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 +G EAL RW +R ++ PL+FI IAE+ G I E+ +++ A + + + + + Sbjct: 713 GGAVGLEALVRWRKGDR-MVPPLEFIPIAEETGLITEVDAWVLRAACLQLKMWRDQ--KQ 769 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 + +N+SP Q + + E +++E+ ++ L +E+TE+++ E + QL Sbjct: 770 QMVPVSVNLSPRQFQDAYCVELVRKVLQESNIEPGCLKIEVTESMVMHNAEEALRTMTQL 829 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYN 733 + GV++S+DDFGTG S+L D +K+D F ++ I+R I L + Sbjct: 830 KAMGVQLSMDDFGTGYSSLSYLKMFPFDQLKIDKSFVRNVTNDPQEAAIIRAIIGLGKTL 889 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 I ++AEGVE+ + L++ GC QGY Y P+P +A Sbjct: 890 GIKIVAEGVETVEQYSFLVRAGCDLIQGYFYSPPLPVAA 928 >UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HTT7_9BACT Length = 860 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 116/462 (25%), Positives = 207/462 (44%), Gaps = 30/462 (6%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--- 388 +I + E + + + E K E N+LL L +YD +G + +IE Sbjct: 396 EISSSVFSEPSGSFVTLVLRDLTERKTFE----NQLLYLANYDALTGLPNRIHLIERLKQ 451 Query: 389 ------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 N Q+LA+ + L + V G + ++ ++ +R++ + + F Sbjct: 452 AIPLAERNGQHLALLFLDLDRFKGVNDSLGHASGDLLLVEVSKRLSNCVRKGDTVARFGG 511 Query: 443 DLYLLLC-----RENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWS 493 D ++ L RE+ + KI + ++ F N+++ P GE++ Sbjct: 512 DEFVFLLEGLEEREDAKPIAEKI--LGALNAPFEIDNVQVFMNGSIGISTWPHDGESSDL 569 Query: 494 YAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDI 553 + A+ ++ + + F + E + R +R A+E E L +QP +D+ Sbjct: 570 LLRRADAAMYRAKELG-NSYAFYNPEIGALPERRFSMERELRRALERNEFELFFQPQIDL 628 Query: 554 NTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRAS 613 T +GAEAL RW E+G+I P +FI +AE G I +G +I++A + + + Sbjct: 629 ATGNCVGAEALIRWRHPEKGLILPDQFIPVAESTGLIVPMGAWVIRSACPHLKSWREAG- 687 Query: 614 LKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIE 673 L +NVS Q + + M+E+G+ + L +E+TE+V+ + + Sbjct: 688 -MAPLRLTVNVSVKQFERGGLIQTLESSMRESGVDSRLLEIEVTESVLMQHP-MASDTLR 745 Query: 674 QLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLAR 731 +L + G+ ISIDDFGTG S+L ++ +K+D F + I I + Sbjct: 746 ELSRMGILISIDDFGTGYSSLSYLKKLPVYKLKIDRSFVTTLPVDPDMLAITTAIVTMGS 805 Query: 732 YNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 R+ IAEGVES + L +LGC + QGY Y +P+P + Sbjct: 806 ALRLKTIAEGVESREQLDILRRLGCDEIQGYYYSRPLPNDTF 847 >UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K2_9PROT Length = 925 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 106/466 (22%), Positives = 196/466 (42%), Gaps = 29/466 (6%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--- 388 I A+K + G + + E K AE K++SL YD +G +++ Sbjct: 453 NIYAVKSKNGVVTHYVGSYTDLTERKMAE----EKIISLAFYDTLTGLPNRRLLLDRLNY 508 Query: 389 ------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + A+ I L + + G D + +++++ R+ + + Sbjct: 509 ALASGLRTGKNGALLFIDLDKFKTLNDTLGHDIGDLLLKQVAHRLKACVREIDTVARIGG 568 Query: 443 DLYLLLCRE----------NVQTFTRKIAMVNDFDSSFGYRNL--RIHKSAICEPLQGEN 490 D ++++ + + KI + G++ Sbjct: 569 DEFVVMLEDLNIESVEAAAQTEVIGEKILAALRMPYQLLTNEFHSSVSIGISLFSNNGQS 628 Query: 491 AWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPI 550 ++ +A+ + ++ F D + I + +R A+ +L L YQ Sbjct: 629 QDEPLKQADIAMYQAKKSGRNKLRFFDQRMQDTISSRANLEAELRKALANEQLQLHYQIQ 688 Query: 551 VDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQ 610 VD +GAE L RW+ GIISP +F+ +AE+ G I +G +++TA + + + Sbjct: 689 VDSA-HQTIGAEVLLRWIHPVNGIISPAQFVPVAEETGLILPIGLWVLETACAQLKKWQD 747 Query: 611 RASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYL 670 +L INVS Q ++ F ++++ + + L +E+TE ++ + Sbjct: 748 N-PATAQLILAINVSARQFHQNGFATEVRSVIERHDINPALLKLELTEGMLLNNLDDTIA 806 Query: 671 NIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFD 728 + L++ GV+ S+DDFGTG S+L+ + +K+D F D+ IVR I Sbjct: 807 TMRSLQEFGVQFSLDDFGTGYSSLQYLKRLPLAQLKIDQSFVRDLATGYNDQAIVRTIIA 866 Query: 729 LARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 +A + VIAEGVE+E + L+K C QGYL+ KPMP ++ Sbjct: 867 MAHSLNLNVIAEGVETEIQRQILLKNQCSHFQGYLFGKPMPIEQFE 912 >UniRef50_B8DLW6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Desulfovibrio RepID=B8DLW6_DESVM Length = 739 Score = 597 bits (1541), Expect = e-169, Method: Composition-based stats. Identities = 113/457 (24%), Positives = 205/457 (44%), Gaps = 27/457 (5%) Query: 336 LKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNNQ--- 392 + R G + ++E+K E +++ ++D+ +G M + + + Sbjct: 265 FRDRTGQRAGEVGTFLDVSELKRKEA----QIVHQATHDELTGLPNRMGLRQRMEDHALK 320 Query: 393 -----YLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLL 447 LAV + + + V G ++++R + R+ + + D +++ Sbjct: 321 GGPDARLAVLYLDMDNFKTVNDSLGHAVGDELLRAVAGRLVGMAPRRDMVARLGGDEFVV 380 Query: 448 LCRENVQ-----TFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKL 498 L + + T + + F F + + P G + + + Sbjct: 381 LLPLSAEGDGELAETESARIQDSFTRPFNAADHELYVMPSIGISVAPEDGRDPATLLKNA 440 Query: 499 KLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAI 558 ++A+ ++ + F A +++ + I ++IR +E E + YQP VDI T + Sbjct: 441 EIAMYRAKEQGGARFRRFTQAMNDDVTRRLAIEKSIRKGLENDEFVVFYQPRVDIVTGQV 500 Query: 559 LGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDF 618 G EAL RW + ++ PL+FI +AED G + LG ++++ A + R ++ Sbjct: 501 TGMEALVRWARPDGTLVPPLEFIPVAEDTGLVVALGERVLRDACIQTRRWTDELG---PL 557 Query: 619 LLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQ 678 + +N+S Q +P +R + E+GL + L +EITET + R +E+L Q Sbjct: 558 RIAVNISARQF-QPDLLDRVQAALAESGLPPSQLELEITETTMMRDLPTSVAILERLAAQ 616 Query: 679 GVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIP 736 G+ I+IDDFGTG S+L D+IK+D F D+ G G IV I + R + Sbjct: 617 GISIAIDDFGTGHSSLYYLKNFPIDTIKIDRSFVRDVPGDEGDATIVSTIVTMGRNLSLN 676 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 V+AEGVE++D L GC + QGY Y KP+P + Sbjct: 677 VVAEGVETDDQLGFLRAHGCREVQGYYYSKPLPADGF 713 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 108/460 (23%), Positives = 196/460 (42%), Gaps = 24/460 (5%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE------ 387 A++ + + ++I + I K E +L L +D +G ++ Sbjct: 481 NAVRNSKEEITHFVAIFSDITLRKQTE----QRLYYLAHHDALTGLPNRSLFLDRLEHAI 536 Query: 388 ---SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 ++ +AV I L + + G + +++++ +R+ I D Sbjct: 537 HHAQRHHHRIAVLFIDLDRFKFINDTLGHPIGDILLKQVAERMRLNIRAEDTIARLGGDE 596 Query: 445 YLLLCRENVQTFTRKI---AMVNDFDSSFGYRNLRIHKSAIC----EPLQGENAWSYAEK 497 + ++ T + +++ + F + + SA P G A ++ Sbjct: 597 FTVIIENFTDTSAISLITQKIISACEKPFNIKGNELFVSASIGVSLYPEDGHEASMLLQR 656 Query: 498 LKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 A+ + S F E + + +R A+ E L YQPI+++ + A Sbjct: 657 ADAAMYQAKKRGKSCCQFFTTEINTAATEQLALKNLLRRALARKEFQLYYQPIINMESGA 716 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 I+ EAL RWV E G+ISP FI +AE+ G I LG +++TA + + ++Q Sbjct: 717 IVSVEALIRWVDPELGLISPNTFIPLAEENGLILPLGEWVLQTACTQAKIWNQSNPY--P 774 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK 677 + IN+S QL + F ER + I+K+ + L +E+TE+++ E + L+K Sbjct: 775 VRIAINLSARQLEQTDFSERVSEILKKTPFPTDHLELELTESMLINRMESSLKTLNTLKK 834 Query: 678 QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD--IFGTAGKIVRIIFDLARYNRI 735 G R+S+DDFGTG S L D++K+D F I I + +A + Sbjct: 835 MGCRLSLDDFGTGYSPLAYLKRFPIDTVKIDRSFVQGISIDPDDAAITTAVTTMAHSLKR 894 Query: 736 PVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 VIA+GVE+ + L ++ +AQGY P+P + Sbjct: 895 AVIAKGVETREQLNFLNEIKVDEAQGYFISYPVPAEELTQ 934 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 100/448 (22%), Positives = 194/448 (43%), Gaps = 24/448 (5%) Query: 342 DAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQ 392 + I I K+ E K+ L +D +G + + +Q Sbjct: 353 QITGVFMIVRDITNKKEYEA----KINYLAFHDSLTGLPNRRFVEQQLDQVIMEAQKTDQ 408 Query: 393 YLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCREN 452 + V + L + V G D + ++++ R+ E + + D ++++ + Sbjct: 409 QVYVLFLDLDHFKLVNDSLGHDFGDLLLQEASLRLRECVGKKGTVYRLGGDEFMVILTDV 468 Query: 453 VQTFTRKIA--MVNDFDSSFGYRNLRIHKSAIC----EPLQGENAWSYAEKLKLAISSIR 506 + +A + + +F ++ + P G++ A+ + + Sbjct: 469 TEREVSSMANEINETIEQAFFIHGHELYITTSIGISRYPEDGQDRSVLMRNADAAMYAAK 528 Query: 507 DHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCR 566 D + F + + + I + A+ E L YQP V + AI+G EAL R Sbjct: 529 DKGKNSFHLYVPNLEQAVNDKMNIQNELNRALARQEFLLHYQPQVSAKSGAIVGVEALIR 588 Query: 567 WVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSP 626 W ERG++ P +FI++AE+ G I +G +++TA + + + + + +N+S Sbjct: 589 WDHPERGLLLPDQFISVAEETGLIVPIGEWVLRTACKQNKQWQDQGL--KPLRVAVNLSA 646 Query: 627 WQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDD 686 Q + F + I+ + L L +EITE+ + +++L++ GV ++IDD Sbjct: 647 RQFLKQDFTQMIAEILHQTRLAPEYLELEITESSMI-DVHRATQALKELKQLGVHVAIDD 705 Query: 687 FGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNRIPVIAEGVES 744 FGTG S+L E + +K+D F D+ + IV I +A + ++ VIAEGVE+ Sbjct: 706 FGTGYSSLYYLKEFPLNRLKIDRSFVRDMIEQPSNQAIVSTIISMAHHLQMHVIAEGVET 765 Query: 745 EDVARELIKLGCVQAQGYLYQKPMPFSA 772 ++ L + C + QGYL+ +P+P Sbjct: 766 KEELAFLQEHLCEEVQGYLFSRPLPSED 793 >UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2Z8_DESAC Length = 1288 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 106/462 (22%), Positives = 196/462 (42%), Gaps = 26/462 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------ 385 + A+ + + I++ I++ K+++ KL L +D + Sbjct: 823 SMSAVCDDQQEVSHYIAVFTDISQAKESQ----EKLDYLSWHDPLTDLPNRSLFCTHLDQ 878 Query: 386 ---IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + AV L + V FG + ++RK+ R+ + + Sbjct: 879 AVKHAERKHHSFAVLCFDLDHFKDVNDSFGHLVGDALLRKIADRLRSCLRESDMLARLGG 938 Query: 443 DLYLLLCRENVQTFTRKI---AMVNDFDSSFGYRN------LRIHKSAICEPLQGENAWS 493 D ++LL + + + +++ + + P G +A Sbjct: 939 DEFVLLLEDVADSHRVTMMAEEILHQLQQPICLTETDLEVQVSVSVGIAVYPEHGRDALE 998 Query: 494 YAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDI 553 ++ A+ + H + F + ++ + +E + ++ ++R A+E E + YQP VD+ Sbjct: 999 LLQRADSALYRAKQHGRARFAYYNEEMTEQAQERVQLSFHLRQALEKKEFAVYYQPQVDL 1058 Query: 554 NTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRAS 613 T I+GAEAL RW S E G+++P +FI +AE+IG I +G I++ + + + Sbjct: 1059 GTGQIVGAEALMRWNSPELGLVTPDRFIPLAEEIGCICSMGTWILRQVCEQGKAWLDAGY 1118 Query: 614 LKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIE 673 L +N+S Q E R ++E G A L +E+TE+ + + ++ Sbjct: 1119 --PPLTLAVNLSAVQFAEEDIACRLKETLQETGYPAEYLELEVTESTLMHKEQQTIDLLK 1176 Query: 674 QLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLAR 731 L + GVR+++DDFGTG S+L +KVD F D+ A K+V I + Sbjct: 1177 SLNELGVRLALDDFGTGYSSLAYLKYFPLHLLKVDKSFIDDLPADANDCKMVTAIVQMGH 1236 Query: 732 YNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 ++AEGVE+ L +LGC QGY P+P + Sbjct: 1237 GLGFDLLAEGVETVAQRDCLAQLGCDYYQGYYCSPPVPACEF 1278 >UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0D5_PELCD Length = 1141 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 110/458 (24%), Positives = 193/458 (42%), Gaps = 29/458 (6%) Query: 338 IREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--------- 388 I EG I S+ I E K+AE + L +D +G + ++ Sbjct: 664 ISEGQPALIGSLL-DITERKEAE----KTIEHLAFHDPLTGLANRLLFMDRIEQAIAHAH 718 Query: 389 NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL 448 +++ A+ + L + + G + ++++ QR+ + + F D + +L Sbjct: 719 RHHESFALMFLDLDRFKTINDSLGHSAGDAALKEVAQRLTTCLRETDTVSRFGGDEFNVL 778 Query: 449 C-----RENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLK 499 E ++ KI + + + + P G A + + Sbjct: 779 LSGPSHEEEIELIAHKI--LKSLAWPYDINDHEVFMTCSIGIASYPKDGREAITLVKNAD 836 Query: 500 LAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAIL 559 A+ +D + F F + E + + ++R E EL + YQP V + + I Sbjct: 837 TALYRAKDLGRNNFQFYSSSMNARALERMAMESSLRRMFERQELRVHYQPQVGLQSGRIT 896 Query: 560 GAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFL 619 G E L RW +I+P F+ +AE+ G I +G +++ + + + Sbjct: 897 GLEGLVRWEHPVGNMIAPSVFVPLAEETGLIVPMGEWVLQAGCYQLKTWLDAGF--APMR 954 Query: 620 LHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQG 679 L INVS QL + F E ++KE L + L +EITETVI + + +LR G Sbjct: 955 LGINVSAHQLQKSDFAELVMQVLKECDLPPHYLNLEITETVIMHNMNEAFETLRRLRAVG 1014 Query: 680 VRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPV 737 + ISIDDFGTG S+L ++ D +K+D F ++ I R I ++A + V Sbjct: 1015 ITISIDDFGTGFSSLSYLKDLPADHLKIDRAFVQNLPFGNNEANIARHIIEMAHGLNLKV 1074 Query: 738 IAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 IAEGVE++ L + GC + QG+L +P+ + Sbjct: 1075 IAEGVENQAQLDFLREAGCDEIQGFLVSRPLAAEDITE 1112 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 116/465 (24%), Positives = 211/465 (45%), Gaps = 29/465 (6%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---- 388 I +G + ISI+ I + K AE +K L YD + +++ Sbjct: 789 IAPFIGDDGKPQSYISIRTDITQRKAAE----DKSNYLALYDPLTNLPNRRLLLDRLTHA 844 Query: 389 -----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + A+ + L + + G D + +++++ + + + + D Sbjct: 845 LASAMRTGRGGALLFLDLDHFKTLNDTLGHDVGDLLLQQVAECLTACVREGDTVARLGGD 904 Query: 444 LYLLLCRENVQTFTRKIA--------MVNDFDSSFGYRNLRIHKSAICE-PLQGEN---A 491 ++++ + A ++N F + ++ H ++ L G+N + Sbjct: 905 EFVVILEGLSEQEVEAAAQAEVVGEKILNKFIEPYQFKGYEYHITSSVGITLFGKNNLKS 964 Query: 492 WSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIV 551 ++ +A+ + + F D I+ + + +R A++ E L YQ V Sbjct: 965 DELLKQADIAMYQAKKLGRNALSFFDPKMQEGIQARVDMEHELRKALDKNEFQLFYQMQV 1024 Query: 552 DINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQR 611 ++ RA +GAEAL RW+ ERG+I P +F++IAED G I +G +I TA + + + Q Sbjct: 1025 GLSDRA-VGAEALIRWIHPERGLIPPNEFVSIAEDCGMILSIGAWVIDTACAQLKRWEQS 1083 Query: 612 ASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLN 671 + L +NVS Q + F E+ TT + +G+ L +E+TE+ + E Sbjct: 1084 ERTRS-LTLSVNVSAKQFRQADFVEQVTTAIARHGINPMLLKLELTESALLDHIEDAVAI 1142 Query: 672 IEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDL 729 + L+ G+R S+DDFGTG S+L+ + +K+D F DI + IVR I + Sbjct: 1143 MNALKDIGIRFSLDDFGTGYSSLQYLRLLPLYQLKIDRSFVRDIASSIGNQAIVRTIIAM 1202 Query: 730 ARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 A + VIAEGVE++ L+ GC+ QGYL+ +P+P A++ Sbjct: 1203 AHTLNLNVIAEGVETQVQQGILLDSGCMHYQGYLFSEPVPIDAFE 1247 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 597 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 101/458 (22%), Positives = 204/458 (44%), Gaps = 24/458 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE----- 387 + + + + ++E+K+A + K+ + YD +G ++ Sbjct: 172 VSTVCDSDNTVTNYVISGVDVSELKEA----NRKMQQMALYDSLTGLANRRLFVDRLEQA 227 Query: 388 ----SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 S + + +A+ + L + + G D + +++ + QR+ + D Sbjct: 228 VKAASRDRKQIALLFLDLDQFKRINDTLGHDAGDSLLQTVAQRLKNCVRAKDTVARLGGD 287 Query: 444 LYLLLCRENVQTFTR---KIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAE 496 + +L + V TF+ ++ + + P G NA + Sbjct: 288 EFTVLLTDIVDTFSVTPVATQILKALKEPIKLKKHEVIVSTSIGVTLAPTDGANADVLMK 347 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 LA+ ++H + F + + + + + +RHA++ E L +QP V++ T Sbjct: 348 NADLALYRAKEHGRDRYHFYTEELNAHALKQLLMEQELRHALQFEEFTLGFQPQVNLTTG 407 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 I+ EAL RW +G++ P FI++AE+ G IN +G ++K A + + Sbjct: 408 KIVSVEALIRWHHPSKGLVMPDSFISVAEETGLINPIGRWVLKNACMQMKMLQD--LTGS 465 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +N+S Q ++P + + E GL+ L +E+TE+++ + +++LR Sbjct: 466 AIKIAVNLSARQFDDPKLEQSIEEALNETGLEPEWLELEVTESMLMGDIQAVTNKLKRLR 525 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNR 734 + GV ++IDDFG+G S+L ++ +++KVD +F DI + +I I +A + Sbjct: 526 QTGVSLAIDDFGSGYSSLSYLKKLPVNALKVDREFVRDIPEDSNDMEITSAIIAVAHKLQ 585 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 + V+AEGVE+ + L+ C AQGY + KP+ F Sbjct: 586 LKVVAEGVETAEQKEYLLANQCDFAQGYFFSKPLSFED 623 >UniRef50_B9M6C9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M6C9_GEOSF Length = 845 Score = 597 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 110/449 (24%), Positives = 198/449 (44%), Gaps = 28/449 (6%) Query: 347 ISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVG 397 I I + E K E +++ ++D +G M ++ N+ AV Sbjct: 402 IHIVRDVTESKKME----DEIRYQATHDILTGLANRMLFMDHLALSISQGHRYNEIQAVM 457 Query: 398 IIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC-----REN 452 + L +++ G +K+++ + R+ E + + D Y +L E+ Sbjct: 458 FLDLDRFKSINDSLGHAAGDKLLQLISGRLKECVRETDTVARIGGDEYNILITQMAHPED 517 Query: 453 VQTFTRKIAMVNDFDSSFGYRNLR----IHKSAICEPLQGENAWSYAEKLKLAISSIRDH 508 KI ++ + F + I P GE+A + + +A+ ++ Sbjct: 518 ATAIANKI--LSSMNKPFAIDGHQLHVTISIGISLYPTDGEDAETLLKNADIALYHAKEQ 575 Query: 509 MFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWV 568 + + F + A E + + +R A+E EL ++YQP V ++T + GAEAL W+ Sbjct: 576 GRNNYQFYNPALNTRTLERVKMENRLRQALERHELVVLYQPQVAMDTGQVTGAEALVYWL 635 Query: 569 SAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQ 628 E G++SP FI +AE+IGFI ++ +++TA + + + F + +N+S Q Sbjct: 636 HPELGLLSPGHFIPMAEEIGFITDIDEWVLETACAQNKAWQDEGY--RSFNVTVNMSSKQ 693 Query: 629 LNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFG 688 P ++ ++ GL L +EITE + E+ ++ L V +IDDFG Sbjct: 694 FRRPDLVDQVRRVLNATGLPPRFLELEITEGTAMKDIEYTIPSLNTLTGMEVGFAIDDFG 753 Query: 689 TGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESED 746 TG S+L ++ +K+D F + IV I +A ++ VIAEGVE D Sbjct: 754 TGYSSLSCLKKLPIRKLKIDKSFIFGVNTDPNDKAIVATIIAMAHNLKLEVIAEGVEDAD 813 Query: 747 VARELIKLGCVQAQGYLYQKPMPFSAWDK 775 L + C Q QG+LY +P+P + + Sbjct: 814 QLEFLHQNHCDQMQGFLYSRPIPAEDFRR 842 >UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XRM5_DESMR Length = 821 Score = 597 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 110/447 (24%), Positives = 195/447 (43%), Gaps = 24/447 (5%) Query: 341 GDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII----------ESNN 390 G + I+ I I+E K E ++ +D +G Sbjct: 360 GQPQGIVYIYQDISERKAFE----EQITHQAFHDALTGLPNRSLFADRLDRALTRARRRG 415 Query: 391 NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR 450 + AV +I L + + G ++++ ++ +R+ + D + ++ Sbjct: 416 DYQYAVLMIDLNKFKGINDTLGHQAGDQLLVEVSRRLMACVRSMDTVARLGGDEFAVILE 475 Query: 451 E-----NVQTFTRKIAMVNDFDSSFGYRNLR--IHKSAICEPLQGENAWSYAEKLKLAIS 503 E V +I + + ++ +A+ Sbjct: 476 ELKSKKEVMAVVDRIGAALGKPCMLCGTTVTPGASVGIVLRTRDYQSPEDILRDADIAMY 535 Query: 504 SIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEA 563 ++ + D EI + I + ++R A++ GEL L YQPIVD+ T I G EA Sbjct: 536 RAKESGRPS-MIFDRRMHQEILDAINLEADLRAALDRGELLLHYQPIVDVQTGRIEGFEA 594 Query: 564 LCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHIN 623 L RW +RG++ P++FI +AE+ G I LG +I A + R + + + +N Sbjct: 595 LVRWDHPDRGLVPPVQFIPLAEETGLIQPLGRFVIAEACRQLRAWQLELPEAEQLSVSVN 654 Query: 624 VSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRIS 683 VS Q + + +++ GL L +EITE+V+ +H + +L+ GV+I+ Sbjct: 655 VSCHQFVKEGLVDHVAGVLETTGLDPACLKLEITESVLMHDAQHTAGELSRLKALGVKIA 714 Query: 684 IDDFGTGLSNLKRFYEINPDSIKVDSQFT--GDIFGTAGKIVRIIFDLARYNRIPVIAEG 741 IDDFGTG S+L ++ D +K+D F D+ G + +IV+ I LAR + VIAEG Sbjct: 715 IDDFGTGYSSLSYLRQLPIDHLKIDRSFISGDDVNGESQEIVKSIIALARSLGLTVIAEG 774 Query: 742 VESEDVARELIKLGCVQAQGYLYQKPM 768 VE +D +L C +AQG+++ +P+ Sbjct: 775 VEHQDQLDKLRNADCDKAQGFMFSRPV 801 >UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACK6_ALHEH Length = 857 Score = 597 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 99/460 (21%), Positives = 188/460 (40%), Gaps = 22/460 (4%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE---- 387 + A+ + I I + I K AE + L YD +G + E Sbjct: 391 SVSAVTNDNDEVTHYIGIASDITSHKAAE----QHIDYLAHYDTLTGLGNRRLLEEELER 446 Query: 388 ----SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + + A+ + L + + G + ++++ ++ R+ + + D Sbjct: 447 MLRNARGGRPFALFFLDLDRFKNINDTLGHESGDRLLEEVADRLRDLAGPQATLCRIGGD 506 Query: 444 LYLLLCRENVQTFTRKIA--MVNDFDSSFGYRN----LRIHKSAICEPLQGENAWSYAEK 497 + +L T IA +V + + P G + Sbjct: 507 EFAILAPGLSHRQTAGIARQLVEGISRPYEITERPLVVTCSVGVAVHPRDGTRREALISA 566 Query: 498 LKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 A+ ++ H + + F + E + + ++R A+ GE L YQP++D Sbjct: 567 ADTALHYVKAHGSNHYQFHEPGMTAAAAERLHLENDLREALLRGEFELYYQPVLDTERLT 626 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 + GAEAL RW E G+I P +FI +AE+ G I +G +++ A + + + Sbjct: 627 VCGAEALLRWHHPEAGLIPPDRFIPLAEETGLIRPIGTWVLREACAQAARWRRLGLTG-- 684 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK 677 + +NVS Q + ++ L ++L +EITE+V+ + + + +L+ Sbjct: 685 MTVSVNVSGEQFWRDELPQAVRQALEAQALAPDALVLEITESVLMHGSANTETRLRELKA 744 Query: 678 QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRI 735 GV +S+DDFGTG S+L D++K+D F D+ + + + + + Sbjct: 745 MGVGLSLDDFGTGYSSLSYLKRFPIDTLKIDKSFVRDMVRDEHDRTLAQTVIAMGHGLGL 804 Query: 736 PVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 V+AEGVES + L + C + QGY + +P+P A + Sbjct: 805 QVVAEGVESAEHLPLLRRARCDRVQGYHFSRPLPARALSR 844 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 597 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 121/462 (26%), Positives = 207/462 (44%), Gaps = 25/462 (5%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKN--------- 382 I +K EG +++K I E K + L +YD +G Sbjct: 870 SISPIKNAEGIITHFVAVKEDITERK----AQQTTLTYQANYDALTGLPNRFLAIDRLKQ 925 Query: 383 MAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + + +AV I L + V G + + +++K+ QR+ + + + Sbjct: 926 AILQADRQKKRVAVMFIDLDHFKDVNDTLGHEYGDLLLQKVSQRLKQCLRKSDTVARLGG 985 Query: 443 DLYLLLCRENVQTFTRKI---AMVNDFDSSFGYRNLRIHKSAIC----EPLQGENAWSYA 495 D +L++ +T K+ +++ + F SA P G + Sbjct: 986 DEFLIILPNLRETHHCKLIASKILSSLEKPFNLLTEEAFISASIGITLYPDDGNDVSVLM 1045 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 A+ + ++F F E + + I + +R+A++ E +LVYQPI+D+ Sbjct: 1046 RNADAAMYLGKRGGRNDFKFYTMGMNEEAQSRLRIEKLLRYALKKNEFYLVYQPIIDLRF 1105 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 + ++GAEAL RW + E G +SP +FI+IAE+ G I+ELG +I A E ++ + S Sbjct: 1106 QTVIGAEALLRWNNPELGRVSPDQFISIAEETGLISELGAWVISQACQEVVNWQTQGS-- 1163 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 + +N+SP Q E E + + NG+ + L +EITE ++ IEQL Sbjct: 1164 -PIWVAVNLSPRQFRESKLLEIISNAITLNGITNHYLELEITEKLLLEDFPGSKGIIEQL 1222 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYN 733 + R+SIDDFGTG S L + + +K+D F DI +V+ I + Sbjct: 1223 HEMDFRLSIDDFGTGYSALSYLIKFPFNRLKIDRSFIADIPHNQEVLALVKTIIAMGHGL 1282 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 ++ VIAEGVE+ + A L GC AQGY + +P+ + + Sbjct: 1283 KLQVIAEGVETTEQANILEAEGCDYAQGYFFSRPLLSEEFRR 1324 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 597 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 98/447 (21%), Positives = 191/447 (42%), Gaps = 24/447 (5%) Query: 348 SIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNN---------QYLAVGI 398 I+ I+E + + + L L+ +D + + + + V Sbjct: 439 EIEREISEQR--LRDNEDHLEYLVYHDVLTDLPNRQLFRDRLQHAISMASLGQHQVGVLF 496 Query: 399 IKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTR 458 I L + + G + ++++ ++ +R+ + + D + ++ + + Sbjct: 497 IDLDHFKKINDSLGHEVGDRLLCEVARRLRLCIGGLDTVARLSGDEFAIIL-DQLNNIEN 555 Query: 459 KIAMVNDFDSSFGYRN--------LRIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMF 510 I + + + L P G++ S + A+ ++ Sbjct: 556 VILIAQEVNRRLAEMMVVEGYKLFLTASIGISLYPGDGKDVVSLLKCADAAMFKAKELGR 615 Query: 511 SEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSA 570 + F E + + +R A++ L + +QP V++ +R I+GAEAL RW Sbjct: 616 DNYRFYTAGLNERASELLALEGALRQAVDKNHLVVYFQPQVELASRRIIGAEALVRWQHP 675 Query: 571 ERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLN 630 E G+ISP+ FI +AE+ G I +G +++ + + R + + +N+S Q Sbjct: 676 ENGMISPVDFIPMAEETGLIVSIGEWVLRQSCLQARQWQVAGY--PPMRISVNMSARQFR 733 Query: 631 EPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTG 690 + I++E GL L +EITE+++ + + +L G+++SIDDFGTG Sbjct: 734 QKDLVPMVRRILQETGLSPEYLDLEITESILMNDVDGAVERLVELHSLGIQLSIDDFGTG 793 Query: 691 LSNLKRFYEINPDSIKVDSQFTGD--IFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVA 748 S+L + +K+D F D I I + DLAR + VIAEG+E +D Sbjct: 794 YSSLAYLKKFPIQYLKIDRSFVRDVIIDPNDAAIATAVIDLARNMNLNVIAEGIEQQDQH 853 Query: 749 RELIKLGCVQAQGYLYQKPMPFSAWDK 775 + L+ GC QGYL+ +P+P +++ Sbjct: 854 QFLLDRGCGYGQGYLFSRPIPAHEFEQ 880 >UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8G6_SPHTD Length = 760 Score = 597 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 106/453 (23%), Positives = 185/453 (40%), Gaps = 22/453 (4%) Query: 338 IREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE---------S 388 + I+ I+E K E E L+ +D +G + + + Sbjct: 292 LDNPAVGGIVINARDISERKRFEKE----LVHQAYHDPLTGLPNRVFLQRRLADSLAQAA 347 Query: 389 NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL 448 +A+ I L + + G D ++++ +L +R+ F D +++L Sbjct: 348 RERTRVALLFIDLDNFKLINDSLGHDAGDRVLSELGKRLLGCIRCGDMAARFGGDEFMVL 407 Query: 449 C---RENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICEPLQGENA----WSYAEKLKLA 501 + F + + G + A Sbjct: 408 INGTPGTDAALAAADRLAATLAEPFVVDGHELVITTSIGVALGGDPDDRPEDLIRNADAA 467 Query: 502 ISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGA 561 + + + + D A + E + + R++RH +E GE + YQP++D+ TR + Sbjct: 468 MHRAKLLGKARRVVFDPAMYAQAVERLALERDLRHGLERGEFQIYYQPVLDVRTRRPVEV 527 Query: 562 EALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLH 621 EAL RW ERG+ISP +FI IAE+ G I LG+ ++ A + + + Sbjct: 528 EALVRWHHPERGLISPGEFIPIAEETGLIVPLGHWVLAEACRQLAAWRTAFPDCAPSAVS 587 Query: 622 INVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVR 681 +N+S Q P I+ E GL SL +EITE+V+ + L++ GV+ Sbjct: 588 VNLSARQFRHPSLTADIAQILAETGLPPASLKLEITESVMMDDTASTLEALRDLKQLGVQ 647 Query: 682 ISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIA 739 +++DDFGTG S+L D++K+D F + + +V + A R+ V Sbjct: 648 LAVDDFGTGYSSLSYLKRFPTDAMKIDRSFARGLDQSREDQALVEAMIAAANALRLQVTV 707 Query: 740 EGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 EGVE+E+ L ++GC QG+L+ PMP Sbjct: 708 EGVETEEQLEFLERVGCDLVQGFLFAPPMPPDE 740 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 596 bits (1538), Expect = e-169, Method: Composition-based stats. Identities = 106/456 (23%), Positives = 200/456 (43%), Gaps = 24/456 (5%) Query: 338 IREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI---------IES 388 +G + + + E K ++ +L + +D + + + + Sbjct: 1054 DSQGHPIRLRGLIMDVTERKTSQ----ERLNYMAHHDHLTDLPNRLLLKARLDQSIQQAT 1109 Query: 389 NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL 448 LAV I L + + G + ++++L QR+ + + + D ++ + Sbjct: 1110 RKRTKLAVVFIDLDRFKHINDSMGHAAGDALLQQLAQRLRQVLRSSDTVARISGDEFVAV 1169 Query: 449 CR--ENVQTFTRKIA-MVNDFDSSFGYRNLRIHKSAI----CEPLQGENAWSYAEKLKLA 501 E++Q + +A ++ F+ F IH ++ P G + A Sbjct: 1170 LEDIEDIQHASMVVAKLMTVFEEPFPLEGQIIHMTSSMGLSLFPDDGMDTAILLRNADSA 1229 Query: 502 ISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGA 561 + ++ + + F + + E + +R A++ E +LVYQP +D+++ +G Sbjct: 1230 MYRAKEEGRNTYCFYAEEMTSAAFEYVLFENALRGALKRNEFYLVYQPQIDLSSHRWVGM 1289 Query: 562 EALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLH 621 E L RW E GI+SP +FI IAE G I E+G ++ A + + + + + Sbjct: 1290 EVLLRWHHPELGIVSPAQFIPIAEQSGLIQEIGTWVLYRACCQAKTWLDQGIDFGH--IA 1347 Query: 622 INVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVR 681 +NV+ Q+ + +F + +GL + L +E+TE ++ E +E L+ G+ Sbjct: 1348 VNVAAPQIQQNNFVHLVQDALDSSGLPSPHLELELTEGLVMHQTEDRIKQLEVLQDMGIY 1407 Query: 682 ISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIA 739 ++IDDFGTG S+L + + +K+D F DI I + L + + +IA Sbjct: 1408 LAIDDFGTGYSSLSYLKRLPINKLKIDKSFVRDIPHDTNDMAISEAVIALGKALNLRIIA 1467 Query: 740 EGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 EGVE E A L + GC +AQGYLY KP+P + Sbjct: 1468 EGVEQEIQATFLREKGCHEAQGYLYSKPLPPEEITQ 1503 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 596 bits (1538), Expect = e-169, Method: Composition-based stats. Identities = 110/461 (23%), Positives = 195/461 (42%), Gaps = 23/461 (4%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------ 385 I +K +G + I I + I+E K AE ++ L ++D + + Sbjct: 870 SISTIKDADGKISQHIGIISDISERKVAE----ERIQFLSNFDPLTNLPNKNLLNDRTKL 925 Query: 386 ---IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + + + L + + G +++V++L +R + Sbjct: 926 ALATAKRLKTAVTLMFVDLDRFKFINESLGPSIGDQVVKELAERFVAYMRPEDTVCRQGG 985 Query: 443 DLYLLLCRENVQTFTRKIA--MVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAE 496 D ++LL +A +++ F + +I P GE+ A+ Sbjct: 986 DEFILLLPNTDAEGAAHVAKKLLDIVAQPFNFHGQKIVLTASIGISAYPQDGESFEQLAQ 1045 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 A+ + + F F + + + + +R A+E E L YQP D T Sbjct: 1046 SADAALYRAKYEGRNNFQFFARQMHEQAHDILLLESELRSAIEHEEFLLYYQPQYDSKTS 1105 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 I+G EAL RW E+G++SP FI IAE+ G I E+G +++TA+ + + + Sbjct: 1106 KIIGLEALIRWQHPEKGLVSPAVFIPIAEESGLIAEIGDWVLRTAVKQLASWQEAGLGA- 1164 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +N+S Q ++ + I+++ + + L +E+TE + +E + QL Sbjct: 1165 -VPVAVNLSVVQFHQDTLYGSVCQILRDTKVDPSMLELELTEGIAMEDSERTLNVLNQLN 1223 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNR 734 GVR+SIDDFGTG S+L + D +K+D F I I+ I +A+ Sbjct: 1224 SLGVRLSIDDFGTGYSSLSYLKKFKIDKLKIDQSFVRGIGSHPQDAAIITAIISMAKSLS 1283 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 IAEGVE+ + LI C + QGY + KP+P + K Sbjct: 1284 FKTIAEGVETLEQLNFLIANSCDEIQGYYFSKPLPSTEVTK 1324 >UniRef50_B1M2I6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2I6_METRJ Length = 819 Score = 596 bits (1538), Expect = e-168, Method: Composition-based stats. Identities = 115/458 (25%), Positives = 195/458 (42%), Gaps = 30/458 (6%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--- 388 ++ + + +G + I + K AE E + L +D +G E+ Sbjct: 351 EVRTVPLADG---GFVRTFTDITKRKAAEAEVA----RLARHDVLTGLPNRALFHETLER 403 Query: 389 ------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 AV + L G ++V G ++++R++ + + Sbjct: 404 SLADIVQRGGACAVLYLDLDGFKSVNDSLGHQAGDELLRRVAAGLRGIAGDGA-VARLGG 462 Query: 443 DLYLLLCRENVQTFTRKI-AMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEK 497 D + +L ++ FDS F R+ P G +A + Sbjct: 463 DEFAVLSDGGAAEAGALAERLIALFDSPFSVGGHRVGVGLSVGIALAPEHGTDAEPLYRR 522 Query: 498 LKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 LA+ + + A E EE + R++R A++ L L YQP VD +T A Sbjct: 523 ADLALYRAKAEGRGTYRIFTPAMDEEAEERRVLERDLRQALDDNTLGLHYQPQVDGHTGA 582 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 ++G EAL RW RG +SP F+ +AE+ G I LG +++ A E ++Q Sbjct: 583 LVGFEALLRWTHPVRGSVSPNLFVPLAEETGLIVALGDWVLREACREAAQWAQ------P 636 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK 677 + +N+SP Q +P E I+ E GL + L +E+TE++I + +L+ Sbjct: 637 LKVAVNLSPRQFQKPDLPETVLAILAETGLSPDRLELEVTESIIINDMARAVGILRRLKS 696 Query: 678 QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRI 735 G+RIS+DDFGTG ++L D +K+D F + IVR + L R + Sbjct: 697 YGIRISMDDFGTGYASLATLQAFPFDKLKIDRSFVAQLGTGPQAAVIVRAVLSLGRSLGM 756 Query: 736 PVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 V+AEGVE+ + L + C + QGYL+ +P P + + Sbjct: 757 GVVAEGVETHAQMKFLTEEACGEMQGYLFGRPRPITDY 794 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 107/457 (23%), Positives = 190/457 (41%), Gaps = 24/457 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------- 385 I + EG I + N + E+ I +L +YD + + Sbjct: 588 IAPVPNAEGVITHHIGVINDVTEL----IRYQEQLEYQANYDGLTRLPNRNLLRDRLEHA 643 Query: 386 --IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + ++ +AV + L G + V G ++++ + +R+A + D Sbjct: 644 LVVAQRHHTGVAVVFLDLDGFKNVNDSLGHSVGDRLLGVVAERLARCSRTSDTVARHGGD 703 Query: 444 LYLLLCRENVQT---FTRKIAMVNDFDSSFGYRNLRIHKS----AICEPLQGENAWSYAE 496 ++++ + V T + ++ A P G++A + + Sbjct: 704 EFVIVMTDTVDEQSLITWMERVRASIAEPVWLDGTELYVGCSMGASLFPQDGDDAETLMK 763 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 K +A+ +D + F F + + R +R A+ E L YQP VDI + Sbjct: 764 KADVAMYRAKDMGRNTFQFYQPEMNASAGARLNLERRLRRALRDNEFLLHYQPQVDIVSG 823 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 I+G EAL RW E G++ P FI +AE+ G I L +++ A + + + + Sbjct: 824 QIVGIEALVRWHDPEAGLVPPSSFIPLAEESGLIGPLSEWVLREACRQNKAWQDQGL--P 881 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +N+S + + + ++ E GL+ L +E+TE+ I R E L + +L Sbjct: 882 PARVSVNLSARVFQQRNIAKLVMQVLAETGLEPRYLELELTESTIMRNAEEAVLMLNELH 941 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNR 734 G+ ++IDDFGTG S+L D +K+D F DI G I I LA + Sbjct: 942 ALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGVSGDDETITSAIIALAHSLK 1001 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFS 771 + VIAEGVE+ L + C + QG+ + KP+ Sbjct: 1002 LQVIAEGVETSAQLDFLKERACDEMQGFYFAKPLSTE 1038 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 102/455 (22%), Positives = 190/455 (41%), Gaps = 23/455 (5%) Query: 338 IREG-DAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI---------IE 387 I+EG + + + + K E ++ +D + + + Sbjct: 475 IKEGTEIVGEVITFKDVTQRKQME----EEIKYHAYFDSLTDLPNRVLLKDRLTQGLTYA 530 Query: 388 SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLL 447 + + LAV + L + V G + ++R++ R++ + + D + + Sbjct: 531 QLHAEKLAVLYLDLDRFKFVNDTLGHSFGDLLLREVANRLSACVPKSATVSRQGGDEFTI 590 Query: 448 LCRE---NVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKL 500 + +++ F F + I P G+ + Sbjct: 591 YLPNIKSEKEVLKVVNRVIDSFSRPFHLVDNEIYMKTSIGISIFPDNGDTTEILVKNADT 650 Query: 501 AISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILG 560 A+ ++ S + F + E+I + ++ A+E EL + YQP ++ T I G Sbjct: 651 AMYKSKEISGSSYHFFSEGMDTRTFESIKLENDLYKALEQEELVIYYQPQINGKTNKIEG 710 Query: 561 AEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLL 620 EAL RW E G+I P KFI IAE+ G I +G ++K A + + + + S + Sbjct: 711 VEALIRWNHQEHGMIPPDKFIPIAEETGLIVPIGEWVLKEACRQLKKWHDQGS--PLISM 768 Query: 621 HINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGV 680 +N+S QL + +++E L + +E+TE +I R E +++L+ G+ Sbjct: 769 SVNLSARQLEQSDLFAMVKNVLEEVELSPKYIQLELTENLIVRNTESTLKTMKKLKGLGI 828 Query: 681 RISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIAE 740 ++IDDFGTG S+L ++ ++K+D F D+ I I LA+ + VIAE Sbjct: 829 NLAIDDFGTGYSSLGYLKKLPISTLKIDKSFVQDMTKDDAAITNTIITLAKNLNLDVIAE 888 Query: 741 GVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 GVE+++ L C QGY + +PM +K Sbjct: 889 GVETKEQVEFLSARNCYLMQGYFFSRPMAAEDIEK 923 >UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B7KEN2_CYAP7 Length = 1471 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 116/459 (25%), Positives = 209/459 (45%), Gaps = 23/459 (5%) Query: 329 STDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII-- 386 L + + I+S+ I E K AE +L +DQ +G + ++ Sbjct: 1005 WNFSSAPLGRLADNRRLIMSMALDITERKQAE----EQLRHAAVHDQLTGLPNRILLLDR 1060 Query: 387 --------ESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIV 438 + A+ I L + V G ++++ + ++ + Sbjct: 1061 IEQAIKRTQQEEKYLFALLFIDLDRFKVVNDSLGHWVGDQLLGAIADKLKACVRPMDTVA 1120 Query: 439 TFNADLYLLLCRE---NVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICEPLQG----ENA 491 F D +++L + + ++ SSF + S E+A Sbjct: 1121 RFGGDEFVILLENLTSRTEATKMAQQITDELRSSFCLQGQDFFISVSIGITFPSSYEESA 1180 Query: 492 WSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIV 551 +A+ ++ + + D + + + N+R A+E EL + YQPIV Sbjct: 1181 SELLRNADIAMYRAKEKGRARYTIFDSKMHIQATRLLELETNLRLALEREELIVHYQPIV 1240 Query: 552 DINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQR 611 + T +LG EAL RW ++G+ISP +FI IAE+ G I LG ++ + + + + + Sbjct: 1241 SLTTGKLLGFEALVRWEHPKKGLISPGEFIPIAEETGLIIPLGEWVLLESCRQMKAWQKE 1300 Query: 612 ASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLN 671 S D + +N+S QL PH +I+K+ GL+ +L +EITE+++ E Sbjct: 1301 FSGLDKIRVSVNLSGKQLEYPHLINCLESILKQTGLEGKNLKLEITESMLMNNKEVVSDL 1360 Query: 672 IEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDL 729 + Q++ + ++ISIDDFGTG S+L + + D++K+D F + G +IV I +L Sbjct: 1361 LLQIKGKNIQISIDDFGTGYSSLSYLHYLPVDTLKIDRSFVNRMTQLGENFEIVEAIINL 1420 Query: 730 ARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 A + ++ V+AEGVE+E ++L +LGC QGY + KP+ Sbjct: 1421 AHHLQMDVVAEGVETEQHIKQLKQLGCESGQGYFFSKPL 1459 >UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Acidovorax RepID=A1TLA7_ACIAC Length = 850 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 114/471 (24%), Positives = 200/471 (42%), Gaps = 33/471 (7%) Query: 335 ALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII-------- 386 + +G + I E K + E + L +D +G + Sbjct: 383 PVFSADGAFLGYRGVGRDITERKRVDAE----IERLAFFDPLTGLPNRRLLTDRLRRAIG 438 Query: 387 -ESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLY 445 + + A+ + L + + G D ++++ + QR+ + F D + Sbjct: 439 TAARERSHGALLFLDLDNFKDLNDTLGHDMGDRLLVQAAQRLLACAGAGDTVSRFGGDEF 498 Query: 446 LLLC----------RENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICEPLQGENAWS-- 493 ++L R + +I + G +I L G Sbjct: 499 VVLAEGLPGDMHRARADAAVLANRITAALGRPYAVGGMGHHHSTPSIGLALFGGGTGDGA 558 Query: 494 ----YAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQP 549 + LA+ + + F D + L + + +R A+E EL L YQP Sbjct: 559 GVDDLLKHADLAMYQAKAAGRNTIRFFDPSMLQAVLARAALESELRLALESDELLLHYQP 618 Query: 550 IVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFS 609 +V+ ++LGAEAL RW +RG++ P +FI AE G I LG +++ A + +S Sbjct: 619 LVN-GDGSMLGAEALVRWRHPQRGLVMPGEFIPAAEQGGLIVALGQWVLERACAQLVAWS 677 Query: 610 QRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFY 669 + A+ +L +NVS Q +P F ++ ++ +G + L +E+TE+++ E Sbjct: 678 RSAATAQ-LVLAVNVSVRQFRQPDFVDQLLQTLRRSGAQPRLLKIELTESLLMADVEDVI 736 Query: 670 LNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIF 727 +EQLR GV +IDDFGTG S+L + D +K+D F D+ IVR I Sbjct: 737 ARMEQLRAHGVGFAIDDFGTGYSSLAYLKRLPLDQLKIDQSFVRDVLTDPNDAAIVRTIL 796 Query: 728 DLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 LAR + V+AEGVE+ + L + GC QG+L+ +P P + +++ + Sbjct: 797 ALARSLDLEVVAEGVETTGQLKFLQRHGCKAFQGHLFGRPAPAAVLERALR 847 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 595 bits (1536), Expect = e-168, Method: Composition-based stats. Identities = 114/446 (25%), Positives = 196/446 (43%), Gaps = 29/446 (6%) Query: 352 SIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE---------SNNNQYLAVGIIKLC 402 I + K AE E + L YD +G +++ S Q+ A+ I L Sbjct: 384 DITDRKRAEQE----IERLAFYDALTGLPNRRMLLDRLQRAVAATSRTQQFGALLFIDLD 439 Query: 403 GLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIA- 461 + + G D + ++ ++ R+ + + F D ++++ T + Sbjct: 440 NFKDLNDTLGHDMGDHLLSQVAARLLACVRETDTVARFGGDEFVVMLETLRPELTEAASQ 499 Query: 462 -------MVNDFDSSFGYRNLRIHKS-AICEPLQGE---NAWSYAEKLKLAISSIRDHMF 510 ++ + F + + + +I L G+ + ++ LA+ + Sbjct: 500 AEIVAEKLLASLNQPFALGGQQHYSTPSIGITLFGDERLSVDELLKRADLAMYQAKGAGR 559 Query: 511 SEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSA 570 + F D + + ++R + GEL + YQP+VD +LG EAL RW Sbjct: 560 NTQRFFDPDMQAAVNARSNLEADLRQGLARGELCVYYQPVVDHRA-RLLGVEALVRWRHP 618 Query: 571 ERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLN 630 RG+ISP FI +AE G I LG Q+++TA G+ + + +R + + +NVS Q Sbjct: 619 VRGMISPADFIPLAEQTGLILPLGQQVLQTACGQLQRWGERKQTRH-LSVSVNVSARQFR 677 Query: 631 EPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTG 690 +P F ++ G L +E+TE+++ E +EQL+++GV ++DDFGTG Sbjct: 678 QPGFVAEVLQTLQGCGADPRKLKLELTESLLLGDVEDTIARMEQLKREGVGFALDDFGTG 737 Query: 691 LSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVA 748 S+L + D +K+D F D+ IVR I LA+ + V+AEGVE+ Sbjct: 738 YSSLSYLKRLPLDQVKIDQGFVRDVLTDPNDAAIVRTILALAQSLDLEVVAEGVETTGQL 797 Query: 749 RELIKLGCVQAQGYLYQKPMPFSAWD 774 L GC QGYL+ +P P D Sbjct: 798 AFLRLHGCEGFQGYLFGRPGPVEDID 823 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 595 bits (1536), Expect = e-168, Method: Composition-based stats. Identities = 110/457 (24%), Positives = 197/457 (43%), Gaps = 28/457 (6%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNN- 390 I L+ +G+ +++ I+E K+ E ++ + YD + + + + + Sbjct: 165 NISVLQDGQGEISHFVALFTDISERKEQEA----RVQHMAEYDALTDLPNRVLVNDRLHQ 220 Query: 391 --------NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + LAV + L + + G +++++++ +R+A + Sbjct: 221 AIRQAELQHNQLAVLFVDLDHFKNINDTLGHCAGDELLKEVARRLAGAVRGLDTVGRTGG 280 Query: 443 DLYLLLCRE-----NVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWS 493 D ++L+ +I + F + P G + + Sbjct: 281 DEFVLILPSINQPGEAAQIAERI--LRTIQQPFQIGEHSLVVGCSIGISLMPDDGSDIQT 338 Query: 494 YAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDI 553 LA+ + H + F F ++ E + + +R AME +L+LVYQP D+ Sbjct: 339 LLMNADLAMYHAKAHGRNTFRFYTREMNTQVAERLLMENRLRRAMEQEQLYLVYQPQYDM 398 Query: 554 NTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRAS 613 + +LG EAL RW + G+I P +FI +AED G I LG ++ A + + + Sbjct: 399 AGQRLLGCEALLRWRDPDEGLIMPGRFIPVAEDTGLIVPLGRWVLDQACRQASLWLRAGL 458 Query: 614 LKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIE 673 + + +NVS QL F + ++ + L + L +E+TE+ + + + Sbjct: 459 --EPMRVAVNVSAHQLMRHDFIDDVREALQRHALPGHCLELEVTESTLMADADLASRQLA 516 Query: 674 QLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLAR 731 ++ GVR++IDDFGTG S+L PD +K+D F D+ G IV I LA Sbjct: 517 VIKAMGVRLAIDDFGTGYSSLAYLKRFAPDLVKIDRSFISDLPGDEENAAIVSAIVHLAG 576 Query: 732 YNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 + +AEGVE+E+ R L LGC QGYL P+ Sbjct: 577 ALGMETLAEGVENENQQRFLQTLGCEAMQGYLLGSPL 613 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 595 bits (1535), Expect = e-168, Method: Composition-based stats. Identities = 109/452 (24%), Positives = 188/452 (41%), Gaps = 21/452 (4%) Query: 342 DAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--------NNNQY 393 +E+I++ +A + +++ L +D +G + E Sbjct: 315 QEQELIAMAAHLAGIAIERKRAEDRISFLAHHDALTGLPNRVLFEEQVDGMLEEIRERDQ 374 Query: 394 LAVG-IIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC--- 449 AV + L + + G +++++ + R+ + +V D +++L Sbjct: 375 CAVLAFLDLDNFKLINDSLGHAAGDELLKAVAGRMRASVRKADFVVRVGGDEFIILLNGL 434 Query: 450 -RENVQTFTRKIAMVNDFDSSFGYRN----LRIHKSAICEPLQGENAWSYAEKLKLAISS 504 +E +R + + + + C P QG A +A+ Sbjct: 435 PKERDIVLSRLEDIRSAIAMPLQLQGRSLQVSCSMGVACFPNQGRTAGELLANADMAMYR 494 Query: 505 IRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEAL 564 ++ + E + +R A+ E L +QP +++ T I AEAL Sbjct: 495 AKELGRDNIQVFTEEMAARAHERLQWQEELREALAGEEFLLHFQPQMNLGTGRIFAAEAL 554 Query: 565 CRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINV 624 RW RGIISP FI +AE+ G I +G ++ A + + + ++ +NV Sbjct: 555 LRWNHPVRGIISPSVFIPLAEETGLIVPIGDWALRAACRQLKAWQDAGL--PPLIISVNV 612 Query: 625 SPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISI 684 S Q E ++ R I+KE GL+A L +E+TE++I + + L GV ++I Sbjct: 613 SARQFRERNWASRVAEILKETGLEARYLELELTESLIMQDVPGAIATMHALEAIGVHLAI 672 Query: 685 DDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGV 742 DDFGTG S+L +K+D F DI A I I LA+ + VIAEGV Sbjct: 673 DDFGTGYSSLSALKRFPVRRLKIDRSFVTDIPLDADDMAITSAIISLAQKLGLRVIAEGV 732 Query: 743 ESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 ESE L K GC + QGY + +P+ A++ Sbjct: 733 ESEAQVEFLQKAGCDEIQGYFFSRPLSAEAFE 764 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 595 bits (1535), Expect = e-168, Method: Composition-based stats. Identities = 107/468 (22%), Positives = 197/468 (42%), Gaps = 33/468 (7%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE---- 387 I A+K G + I K AE +++ +L +D ++G +++ Sbjct: 704 SITAVKENGGIVTHYVGTFMDITRRKAAE----DEIRNLAFFDLQTGLPNRRLLLDRLQQ 759 Query: 388 -----SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + + + A+ +I L + + G D+ + +++++ QR+A + + Sbjct: 760 ALAASARHRRQGALLLIDLDNFKTLNDTLGHDKGDLLLQQVAQRLASCVHEGGTVARLGG 819 Query: 443 DLYLLLCRE----------NVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQG 488 D ++++ +T ++I + ++ Q Sbjct: 820 DEFVVMLENLSEHLEAAATQAETLAKRI--LASLKQTYSLDGYEYQSTASIGITLFSEQQ 877 Query: 489 ENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQ 548 E ++ LA+ + + F D + + +R A+ E L YQ Sbjct: 878 ETTEDLLKRADLAMYQAKAVGRNTLRFFDPEMQAVVTSRAALEAGLRRAVTSDEFLLYYQ 937 Query: 549 PIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHF 608 VD + G EAL RW ERG+++P +FI +AED G I LG ++ A + + Sbjct: 938 AQVDGQ-GHLTGCEALLRWQHPERGLVAPGEFIALAEDTGLILPLGRWVLDAACTQLAQW 996 Query: 609 SQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHF 668 + R + +NVS Q ++ F + T++ G L +E+TE+++ E Sbjct: 997 ATR-PEMAHLTVAVNVSVRQFHQADFVNQVLTVLDSTGTNPQRLKLELTESLLIGDVEDV 1055 Query: 669 YLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD--IFGTAGKIVRII 726 + L+++GV S+DDFGTG S+L + D +K+D F + I I R++ Sbjct: 1056 IAKMSILKEKGVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQGFVRNILIDPNDAAIARMV 1115 Query: 727 FDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 L + VIAEGVE E L +LGC QGYL+ +P+P ++ Sbjct: 1116 IALGDSLGLAVIAEGVEIEAQRDFLARLGCHACQGYLFCRPLPLDQFE 1163 >UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HNE5_CYAP4 Length = 877 Score = 595 bits (1535), Expect = e-168, Method: Composition-based stats. Identities = 109/467 (23%), Positives = 207/467 (44%), Gaps = 26/467 (5%) Query: 335 ALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII-------- 386 A++ EG A + + I+E + A+ +L+ +D +G + Sbjct: 407 AVRNSEGKAYRMAGSLSDISEQRLAQ----EQLMHDALHDPLTGLPNRTLFMDRLRQVIH 462 Query: 387 --ESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 + N AV + L + + G + ++ +L R + D Sbjct: 463 HARRHRNYNFAVLFVDLDRFKVINDSLGHLAGDTLLIELAHRFQIGLRPDDTVARLGGDE 522 Query: 445 YLLLCRE--NVQTFTRKIAMVNDF-DSSFGYRNLRIHKSAICE--PLQGEN--AWSYAEK 497 +++L + V+ R + F + SA P + Y Sbjct: 523 FVILLDDLLEVEESIRIAHRIQTLVQQPFIINGQTVFTSASIGIAPKDTHHHKPEHYLRN 582 Query: 498 LKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 +A+ + S + + + ++R A+E EL L YQPI+ +NT Sbjct: 583 ADIAMYRAKAAGGSRHVLFTSVMHTSALVRLQLETDLRQALERQELRLQYQPILCLNTDQ 642 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 I+G EAL RW G+I+P FIT+AE+ G I +G +++ A + + + + Sbjct: 643 IVGFEALVRWQHPRDGLIAPGHFITVAEETGLIVPIGEWVLQEACRQMQCWHTQFGQVLP 702 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK 677 ++ +N+S QL++P ++ ++ E GL+ L +EITE++I E + +L++ Sbjct: 703 LMVSVNLSSKQLSQPDLLQQVDRMLAETGLRPQQLKLEITESMILDNTEVARQTLLKLKE 762 Query: 678 QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRI 735 + +++S+DDFGTG S+L + + D +K+D F ++ + ++VR I +A ++ Sbjct: 763 RQIQLSMDDFGTGYSSLNYLHRLPIDLLKIDRSFIHEMDSGEESRELVRAIISIAHSLKM 822 Query: 736 PVIAEGVESEDVARELIKLGCVQAQGYLYQKPM---PFSAWDKSGKL 779 VIAEG+E+ +L +LGC QGYL+ P+ P + + + L Sbjct: 823 QVIAEGIETRSQLEQLHELGCEFGQGYLFSTPLDPEPAADFLQQAFL 869 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 595 bits (1535), Expect = e-168, Method: Composition-based stats. Identities = 99/464 (21%), Positives = 189/464 (40%), Gaps = 32/464 (6%) Query: 333 IEALKIREGDAKE----IISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI--- 385 + + + G A E +I I E K E E L ++D +G + + Sbjct: 356 VSQVVLAHGGANEMPEFFSTIARDITERKHFEQE----LRRQATHDALTGLPNRILLEDQ 411 Query: 386 ------IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVT 439 + +++ +V + + + + G + ++R QR+ + + Sbjct: 412 IEAVVAHSARSHKLASVLFLDIDNFKRINESLGHAAGDAMLRHAAQRLRDCVRPTDVVAR 471 Query: 440 FNADLYLLLC-----RENVQTFTRKIAMVNDFDSSFGYRNLRIHKS----AICEPLQGEN 490 + D + ++ +N+ K+ F++ ++ S P G++ Sbjct: 472 YGGDEFTIVLGDLSHVDNIPAILHKVRAA--FETPLVISGQEVYASFSVGVSVYPHDGDD 529 Query: 491 AWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPI 550 + + A+ + + + F +E + + ++R A++ GE L YQP Sbjct: 530 GATLLKNADTAMYRSKASGRNRYQFYAPEMNARGQELLSLETDLRRALDRGEFRLHYQPQ 589 Query: 551 VDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQ 610 +D+ I G EAL RW G+I+P F+ + ED G I +G +++ A ++R + Sbjct: 590 LDLRDNRIAGVEALLRWKHPRDGVIAPGDFVPLLEDTGLIVPVGEWVLRNACTQYRACRE 649 Query: 611 RASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYL 670 + +NVS Q E + +++E + + L +EITE+ + Sbjct: 650 SGV--APVRISVNVSARQFREDTLLRQVEQVLREECMPPHHLELEITESTAMQDVAATGD 707 Query: 671 NIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFD 728 + L GVR++IDDFGTG S+L D++K+D F D A I Sbjct: 708 ILAALDALGVRLAIDDFGTGYSSLAYLKRFPLDALKIDQAFIRDAPRDANIAAIAEASIS 767 Query: 729 LARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 L + V+AEGVE+ + L + C QG+ + +P+P A Sbjct: 768 LGHKLGLEVVAEGVETAEQLAFLRRRACDLIQGFHFSRPLPADA 811 >UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=C6NZZ7_9PROT Length = 1152 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 109/465 (23%), Positives = 205/465 (44%), Gaps = 31/465 (6%) Query: 338 IREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--------- 388 G+ + +I + K AE ++ SL YD + +++ Sbjct: 683 DEHGELMGLRGTGMNITDRKRAE----EEIKSLAFYDPLTHLPNRRLLVDRLQHALASST 738 Query: 389 NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL 448 + + A+ I L + + G D + +++++ R+A + + D ++++ Sbjct: 739 RSGREGALLFIDLDNFKTLNDTLGHDIGDLLLQQVALRLASCVREGDTVARLGGDEFVVM 798 Query: 449 CRENVQTFTRKIA--------MVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAE 496 E + A ++ + + A + ++ + Sbjct: 799 LEELSEQTLEAAAQTESIGEKILLTLNQPYLLAAHEYRNSPSIGATLFGNKPQSIEELLK 858 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIV-DINT 555 + +A+ + + F D + + R + A+E + L YQ + D+ Sbjct: 859 QADIAMYQAKKAGRNTLRFFDPQMQETVIARALLERELSKALENDQFQLYYQIQMTDL-- 916 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 GAEAL RW+ ERG+I P FI +AE++G I +G ++ TA + + + + AS + Sbjct: 917 NEPFGAEALIRWIHPERGLIPPNHFIPLAEEVGLILPIGLWVLDTACNQIKIWEKNASTR 976 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 + +L +NVS + F + T+++ + + L +EITE+++ E + L Sbjct: 977 -ELVLAVNVSARSFFQDDFVTQIQTVLQRHAINPKRLKLEITESMMLNSIEQTIEKMNAL 1035 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYN 733 +K GV+ ++DDFGTG S+L+ + D +K+D F DI + IV I +A Sbjct: 1036 KKLGVQFAMDDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIATDSSDKAIVTTIVAMAHSL 1095 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 + VIAEGVE+E + LI+ GC Q QGYL+ KP P +++S K Sbjct: 1096 NLDVIAEGVETEQQRQLLIESGCSQYQGYLFGKPAPIRQFEESLK 1140 >UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L753_EXISA Length = 819 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 114/480 (23%), Positives = 207/480 (43%), Gaps = 22/480 (4%) Query: 310 RRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLS 369 +R + EL+ + ++ + SI I+E K E ++ Sbjct: 335 KRVIGQTVELIGLRKDGVEVPIEMSLGTWKTDKGIFFSSIIRDISERKRIEA----QIND 390 Query: 370 LISYDQESGFIKNM-------AIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRK 422 L+ D +G A++ + ++ A+ I L + + FG ++ +++ Sbjct: 391 LVYLDPLTGLPNRRLFSDRLDALLGQSQSEQFALYYIDLDNFKVINDRFGHSIGDQFLKQ 450 Query: 423 LCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFT--RKIAMVNDFDSSFGYRNLRIHKS 480 + RI + + D +++L + R ++N F N + Sbjct: 451 VTTRIQSTIQKTDTLARLGGDEFIILSPDTKSNLAAHRAQELINVLHPPFELENEEVFTG 510 Query: 481 AICE----PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRH 536 A P G+ A + +A+ + + + F + + ++ +R Sbjct: 511 ASIGISLHPSDGDTAEELIKNADIAMYRAKADGKNGYQFFTNELNESVSRRSNLSMALRK 570 Query: 537 AMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQ 596 + GE + YQP + + T ++G EAL RW E G+ISP +FI IAE+ G I+ LG Sbjct: 571 GIGRGEFTVHYQPQIQLETEMVIGMEALVRWNHPELGMISPGEFIPIAEETGSIHRLGEF 630 Query: 597 IIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEI 656 ++ A + + + + F + +N+S Q + E + + +GL+A L +E+ Sbjct: 631 VLNEACRQNKAWQDASI--PPFRVAVNISAVQFAQKDLPEVVSRALAASGLEAQYLELEL 688 Query: 657 TETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF 716 TE+VI + + + +L GV +SIDDFGTG S+L D++K+D FT +I Sbjct: 689 TESVI-QSADRAIETMHELVALGVHLSIDDFGTGYSSLSYLKLFPIDTLKIDQHFTKNIE 747 Query: 717 GTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 +V+ I +A + VIAEGVE+E+ L C QAQGY Y +P+P + Sbjct: 748 SDEKDAALVKTIIRMAHELDLNVIAEGVETENQVAFLKAESCNQAQGYFYNRPLPAEEIE 807 >UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC Length = 1499 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 103/453 (22%), Positives = 187/453 (41%), Gaps = 22/453 (4%) Query: 342 DAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESN---------NNQ 392 ++ +A + DA + L +D + + + Sbjct: 1026 KPVHFSVLRKRVARLLDA-SRAEKDIHQLAYHDVLTSLPNRTLFHKQLGELMNRSHLRGE 1084 Query: 393 YLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCREN 452 AV + L + V G + + +++ RI + D + ++ + Sbjct: 1085 QFAVLFLDLDRFKLVNDTLGHEVGDLLLKAAADRIVGCLRSNDMVARLGGDEFTVILEKI 1144 Query: 453 -----VQTFTRKIAMVNDFDSSFGYRNLRIH--KSAICEPLQGENAWSYAEKLKLAISSI 505 KI V +F + + I P GE+ + + A+ Sbjct: 1145 ESPRVAAEVAAKICSVLSKVFAFSGQEMYISTSIGISLYPGDGEDVSTLVKHADTAMFRA 1204 Query: 506 RDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALC 565 ++ + + F + + + + +R A+E EL L YQP +++ T I E L Sbjct: 1205 KEQG-NSYQFYEKGMETAAVKRLGLEAELRRALEQNELALYYQPQINLGTGEIATLETLI 1263 Query: 566 RWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVS 625 RW E G+I P +FI +AE+ G I +G I++ A + + + QR F + +NVS Sbjct: 1264 RWHHPEHGLIPPSEFIPLAEETGLIASIGAWILREACTQMQSWLQRGFG--PFHIAVNVS 1321 Query: 626 PWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISID 685 +L ++ TI+KE GL L +EITE+V+ + +LR+ G++ +ID Sbjct: 1322 GRELEREDLVDKIVTILKETGLPPKWLELEITESVVMKGAGAAIPKFRRLREMGIKFAID 1381 Query: 686 DFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNRIPVIAEGVE 743 DFGTG S+L D +K+D F D+ I++ I LA R+ V+AEGVE Sbjct: 1382 DFGTGYSSLNYLKSFPVDILKIDRCFIHDVVSNPDDAAIIKGIIALAHSLRLKVVAEGVE 1441 Query: 744 SEDVARELIKLGCVQAQGYLYQKPMPFSAWDKS 776 ++ L C + QG+ +P+ + +++ Sbjct: 1442 TQAQEEFLKAHQCDRFQGFYLSEPLSAAEIEQA 1474 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 110/441 (24%), Positives = 192/441 (43%), Gaps = 23/441 (5%) Query: 351 NSIAEMKDAEIERSNKLLSLISYDQESGFIKNMA---------IIESNNNQYLAVGIIKL 401 I++ K E KL +L + D+ +G I + + + + LAV + L Sbjct: 197 RDISQRKADE----EKLETLATRDELTGLINRFSYNHLLKKEVALAKRHMESLAVLFLDL 252 Query: 402 CGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKI- 460 G + + G D ++++R+ R++ + + D +L++ + Sbjct: 253 DGFKNINDSLGHDVGDQLLRETANRLSACIRESDTVARIGGDEFLIIMPGIKDVHDPRFL 312 Query: 461 --AMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFI 514 ++N + PL G+N S + A+ +D + + Sbjct: 313 CERILNMIGQPYLIGTQECFVGASIGISLYPLDGDNVESLVKNADTAMYQAKDSGRNAYK 372 Query: 515 FCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGI 574 F A E + + + R +R+A+E + L+YQP V++++ ILG EAL RW E G Sbjct: 373 FFTPAMGEEAFKRMEMERALRYAIEKNQFKLLYQPQVELSSGRILGVEALLRWTHPEWGP 432 Query: 575 ISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHF 634 ISP FI++ E+ I +G ++ A + + + Q + +N + Q + Sbjct: 433 ISPSVFISLIENTNLILPIGEWVLDEACKQNKAW-QALHPGFPLRMAVNFAARQFAQADL 491 Query: 635 HERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNL 694 E ++++GL A L +EITE E ++ L++ GV I+IDDFGTG S+L Sbjct: 492 VETVAKALQKSGLAAEFLELEITEGSAMNDIELNIRKMQALKELGVSIAIDDFGTGFSSL 551 Query: 695 KRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELI 752 D +K+D F +I IV I ++A + VIAEGVE++ L Sbjct: 552 AYLKRFPIDILKIDKSFLDEIQHGKKDAAIVATISEMAHSLGMEVIAEGVETKYQLEFLR 611 Query: 753 KLGCVQAQGYLYQKPMPFSAW 773 GC QGYL+ +P+P Sbjct: 612 GHGCDMIQGYLFSRPVPPEQI 632 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 594 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 99/474 (20%), Positives = 189/474 (39%), Gaps = 35/474 (7%) Query: 330 TDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE-- 387 + + +K+ +G I+ I + K E ++ L YD + + + Sbjct: 348 NNVVAPIKV-DGQTIGIVGFNQDITDRKRNE----EEIHRLAFYDSLTHLPNRRLMFDRL 402 Query: 388 -------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTF 440 + + A+ +I L + + G + ++++ ++ +R+ Q Sbjct: 403 EHALIGSARRKSHGALLLIDLDNFKFLNDTHGHEVGDELLLEVAKRLKTCIRQGDTAARL 462 Query: 441 NADLYLLLCRE-------NVQTFTRKIAMVNDFDSSFGY----RNLRI------HKSAIC 483 D ++++ + +Q + + F L I Sbjct: 463 GGDEFVVILEDIDGAGNGTIQAELIAGHIQAQLNHPFSLVRPPERLSIDYRCASSIGIAL 522 Query: 484 EPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGEL 543 A + A+ + + F D + + +R A++ + Sbjct: 523 FDDTMVTAKELLRRADTAMYQAKAAGRNTLRFFDPEMQAAVTHRAALETELRKAIDEQQF 582 Query: 544 FLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMG 603 L +Q +D + G EAL RW RG I P FI +AE+ G I +G ++ TA Sbjct: 583 HLCFQVQMD-QSGRPTGGEALLRWEHPTRGTIPPASFIPLAEETGLIVPIGQWVLATACR 641 Query: 604 EFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIER 663 + +SQ+ L +NVS Q + F ++ ++ + G A L +E+TE+++ Sbjct: 642 QLAAWSQQ-PETSGLTLAVNVSARQFRQARFTDQLRDLLLQTGAPATRLKLELTESMMLE 700 Query: 664 INEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--K 721 E + +L++ G+R S+DDFGTG S+L + + +K+D F D+ Sbjct: 701 DTEAIIGRMAELKQLGIRFSLDDFGTGYSSLAYLKRLPLNQLKIDQSFVRDVLTDPNDAA 760 Query: 722 IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 I I L + VIAEGVE++ R L +GC QGYL+ +P+P +++ Sbjct: 761 IAETIVALGNILGLEVIAEGVETDAQWRFLANVGCKNYQGYLFGRPLPLLEFEQ 814 >UniRef50_B6IWY2 Diguanylate cyclase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IWY2_RHOCS Length = 979 Score = 594 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 104/459 (22%), Positives = 200/459 (43%), Gaps = 24/459 (5%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES----- 388 +A++ G I + + K E +L+ + ++D +G + + Sbjct: 514 QAIRDDRGRPVRITGTMTDVTDRKRFE----EQLMYVSTHDPLTGLPNRTLLQDRLQHAA 569 Query: 389 ----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 +AV ++ L + V G +K++R + QR+A I AD Sbjct: 570 DQAERKGNSVAVLLLDLDRFKLVNDSLGHQVGDKLLRAISQRLASSVRPADTIGRLGADE 629 Query: 445 YLLLCRENVQ-TFTRKIA--MVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEK 497 +L++ + + ++A ++ FG ++ P + + Sbjct: 630 FLIIAEDLTEPQMAARVAETVLAGLSQPFGLDGQQLFITCSIGITLFPGDATDIGALLRD 689 Query: 498 LKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 A+ + + + + F + + +R A++ G+ L YQP + T Sbjct: 690 ADTAMHTAKSAGGNGYRFFTPEMNEAAVARLSLEHALREAIDQGQFELHYQPKASLETMQ 749 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 +G EAL RW E G+I P FI +AE+ G I +G +++ A+ + + + + Sbjct: 750 TVGVEALLRWRHPEMGMIPPSTFIPVAEETGMILAIGDWVLRAALEQINRWERAGL--EP 807 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK 677 + +NVS Q+ HF +R +++ E G++ + L +EITET + + +LR Sbjct: 808 LPVAVNVSVRQITSSHFADRIQSLLDEYGVRPDLLELEITETAMMSNMAFIADGLAELRG 867 Query: 678 QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRI 735 +G+RI++DDFGTG S+L + ++KVD F + A G I I + R + Sbjct: 868 RGIRIAVDDFGTGYSSLSYLRRLPITTLKVDRSFVSEAPSNADTGAIAATIIAMGRQLGL 927 Query: 736 PVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 V+AEG+E+++ L + C +AQG+L P+P + + Sbjct: 928 TVVAEGIETQEQLDFLRRHRCHEAQGFLIGFPVPAAELE 966 >UniRef50_D2SGK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SGK4_9ACTO Length = 898 Score = 594 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 104/424 (24%), Positives = 190/424 (44%), Gaps = 17/424 (4%) Query: 366 KLLSLISYDQESGFIKNMAIIE-------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNK 418 +L +D +G + +++ + +AV + L + + G + Sbjct: 447 RLTHHALHDPLTGLPNRVLLLDRLEVALAQRSRGGVAVAFVDLDHFKLINDSLGHAAGDT 506 Query: 419 IVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR-----ENVQTFTRKIA--MVNDFDSSFG 471 ++ R+ + F D +++L +V+ ++A + FD + Sbjct: 507 VITAAATRLRAVVRPGDTVARFGGDEFVVLAESVVDERDVEGLAERLAGALAEPFDLAGD 566 Query: 472 YRNLRIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIA 531 + G +A A+ ++ + D + I Sbjct: 567 EVFVTASIGIAVSSGTGGDAHGLLRDADAAMYRAKEAGRARHEVFDSVMRAGAIRRLEIV 626 Query: 532 RNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFIN 591 ++ A+E + L +QP +D+ T +++G EAL RWV ERG+I PL+FI +AE+ G IN Sbjct: 627 NDLHRALERNQFVLHFQPQIDLRTNSLIGVEALLRWVHPERGLIPPLEFIPVAEETGLIN 686 Query: 592 ELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANS 651 +LG +++ A + R + R ++ ++ +N+S QL++P E ++++G A+ Sbjct: 687 DLGRWVLRAACQQGRTWLDRFPDREPLVMSVNLSGRQLHQPRLAEEVAAALEDSGFPADQ 746 Query: 652 LCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQF 711 L +EITE+V+ +E L++ GVR++IDDFGTG S+L D +K+D F Sbjct: 747 LVLEITESVLMNDTAATIHTLEALKELGVRLAIDDFGTGYSSLTYLQRFPIDILKIDKSF 806 Query: 712 TGDIFG---TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 + + R I LA+ R+ +AEGVE + REL L C QGY + +P+ Sbjct: 807 VDGLGSANIEESAVTRTIVALAKTLRLETVAEGVERSEHVRELQSLHCDIGQGYFFARPL 866 Query: 769 PFSA 772 A Sbjct: 867 DAGA 870 >UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=C6XEG9_METSD Length = 718 Score = 594 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 106/465 (22%), Positives = 205/465 (44%), Gaps = 27/465 (5%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES----- 388 A++ G I E K + + ++D +G + + Sbjct: 256 RAVRNDAGKLLYFEGTVEDITERK----SYNALIEYQATHDDLTGLPNRTLMQDRLLQAI 311 Query: 389 ----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 LAV + L + + G ++++ + +R+ + D Sbjct: 312 SYADRTASKLAVVFVDLDKFKDINDSMGHFIGDQLLIAMARRLESCIRDSDTVARPGGDE 371 Query: 445 YLLLCR-----ENVQTFTRKIAMVNDFDSSFGYRNLRI--HKSAICEPLQGENAWSYAEK 497 ++LL + + +++ + S ++ + P G+ + + + Sbjct: 372 FVLLLSNIHGMDALSQTLQRVLALTSEPCSIEGKDFTVTSSIGISLYPDDGKTSETLLKN 431 Query: 498 LKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 A+ + + F F + + E + + +R+A+ E L YQP +++ T+ Sbjct: 432 ADTAMYKAKQEGKNNFQFYTRELNSILVERLEMEYQMRNALGHNEFHLHYQPKLNLRTQR 491 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 I G EAL RW + +G+ISP +FI IAE+ I ++G +++ A E SQ + D Sbjct: 492 ITGVEALIRWHNPRQGLISPNRFIPIAEESSLIEQIGSWVLEKACMESIALSQLSGY--D 549 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK 677 + +NVSP Q + + + +++E GLK + L +EITE + + F + L+ Sbjct: 550 VPVSVNVSPRQFQQSNLVGNISRVLQETGLKPSLLELEITEGTLADTSPQFIKVLNDLKG 609 Query: 678 QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRI 735 G++++IDDFGTG S+L D++K+D F + I++ I L I Sbjct: 610 LGIKLAIDDFGTGYSSLGYLKHFPIDNLKIDRSFVMGLESDTANQAILKAIVALGHNLGI 669 Query: 736 PVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLV 780 ++AEGVE+E L+ +GC + QG+L+ +P+P +D++GKL+ Sbjct: 670 NLVAEGVETERQRDFLLSIGCDEMQGFLFSQPLP---FDQAGKLL 711 >UniRef50_C1DCZ4 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCZ4_LARHH Length = 759 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 110/456 (24%), Positives = 195/456 (42%), Gaps = 22/456 (4%) Query: 340 EGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNN-------Q 392 E + + I+ K AE ++L+ L S+D + + A+ + Q Sbjct: 299 EDRVSNYVGVFTDISRRKAAE----DRLVFLASHDPLTRLLNRDALFRKLEDICLSGIEQ 354 Query: 393 YLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCREN 452 AV I L + + FG + ++R + R++ + D + LL + Sbjct: 355 SFAVLFIDLDRFKLINDSFGHATGDNLLRIVAARLSFVVGSNALLARQGGDEFTLLLEDT 414 Query: 453 VQTFTR---KIAMVNDFDSSFGYRNLRIHKSAICE----PLQGENAWSYAEKLKLAISSI 505 Q ++++ N +H +A P G++A + A+ Sbjct: 415 GQRTAVIDMANRLLDELSQPITLENQELHITASIGIALAPEHGKDAATLLRHADTALYRA 474 Query: 506 RDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALC 565 +D + F F + + + +RHA+ +L L YQP +D + + ++G E L Sbjct: 475 KDAGKNTFAFFTHTLHGLSNQRLALENALRHALPRNQLTLAYQPQIDPHRQRLVGVEVLL 534 Query: 566 RWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVS 625 RW E G +SP FI +AE+ G I +G +++TA + + + +N+S Sbjct: 535 RWHHPELGQVSPATFIPLAEETGLILPIGRWVLETACRQLAAWDTAGFSVGH--VAVNLS 592 Query: 626 PWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISID 685 Q N+P ++ ++GL A L +E+TE+ + + +L++ GVR+SID Sbjct: 593 AHQFNDPGLTHHLKAVLSDSGLAARRLELEVTESTLINNPTAAIALMTELKELGVRLSID 652 Query: 686 DFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVE 743 DFGTG S+L + D++K+D F I A I I +A+ + V+AEGVE Sbjct: 653 DFGTGYSSLAQLKRFPLDTLKIDRTFVSGIPADASDLAITEAIIAMAKKLSLSVVAEGVE 712 Query: 744 SEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKL 779 + D L + G QGY Y P+ A ++ Sbjct: 713 TADQRDFLARCGSELIQGYFYSPPLAAEALHSFSRM 748 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 101/431 (23%), Positives = 192/431 (44%), Gaps = 20/431 (4%) Query: 362 ERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFG 412 E +++ + ++D +G + + + +AV I L + + G Sbjct: 443 EAEKRIIEMATHDALTGLPNRYLLRDRIEQVLVHDTRLQRQMAVLFIDLDHFKTINDSLG 502 Query: 413 VDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC---RENVQTFTRKIAMVNDFDSS 469 + + +++ + R+ + D ++++ E++ +++ F Sbjct: 503 HEIGDLLLKAVADRLKSCVRNEDTVARQGGDEFIVVLNSIAESLDAAKVAQKILDSFALP 562 Query: 470 FGYRNLRIHK----SAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIE 525 F +H P G NA + + +A+ + + + + F D Sbjct: 563 FHIHKNELHIDGSIGIAVFPDDGVNAETLLKNSDVAMYHAKKNGRNNYQFFTDELNKSAY 622 Query: 526 ENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAE 585 E + ++R+A+E EL L YQP++D+ + + G EAL RW E+ +I+P KFI +AE Sbjct: 623 ERHILGLDLRYALERNELLLYYQPVMDMPSHNLYGVEALLRWRHPEQKLITPDKFINLAE 682 Query: 586 DIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKEN 645 + G I +G +I+T + + + ++ + IN+S Q + + + I+ E Sbjct: 683 ETGLIIPIGEWVIRTVCLQIKAWQEQGFYVP--RVAINLSARQFRDKDLIKNISRILSET 740 Query: 646 GLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSI 705 G+KA + +EITE+++ E + +L G+ ISIDDFGTG S+L + ++ Sbjct: 741 GVKAKHIALEITESMLIDNIEKVVETLNRLDAMGLHISIDDFGTGYSSLSYLKQFPIHTL 800 Query: 706 KVDSQFTGDIFGTAGK--IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYL 763 K+D F D+ IV I +A + VIAEG+E E+ L+ C QGY Sbjct: 801 KIDRSFVRDLVTDKNDRTIVAAIIAMAHSLEMEVIAEGIEIEEQLDFLVTQKCNHYQGYY 860 Query: 764 YQKPMPFSAWD 774 + KP+ S + Sbjct: 861 FSKPVTVSEIE 871 >UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ20_DESAC Length = 814 Score = 594 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 113/513 (22%), Positives = 226/513 (44%), Gaps = 31/513 (6%) Query: 289 LPFAFIIIVLLVVYLMTTRVFR-----RQFSEMTELVNTL-AFLPDSTDQIEALKIREGD 342 L + + V+ VV L + + R + L F D Q+ + + + Sbjct: 284 LEWKINLSVMAVVILFSVLLARFFGQYTLVKPLAALAQASHNFGQDQPWQLPSQYCQPAE 343 Query: 343 AKEIISIKNSIAEM----KDAEIERSNKLLSLISYDQESGFIKNMAIIES---------N 389 +++ + ++ + + +++ +L L ++D+ +G +++ Sbjct: 344 IEQLSATFTTMTQRLENSRAIQLQSEQRLEHLATHDELTGLANRTLLLDRLDHAIEEGMR 403 Query: 390 NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC 449 + +AV +I L + + G D+ ++++ ++ +R+ + + D + L+ Sbjct: 404 QHHAVAVLLIDLDRFQVINDSLGHDQGDRLLCQIGKRLCQHVRSTDTVSRLGGDEFALVL 463 Query: 450 RE--NVQTFTRKIA-MVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAI 502 + N ++ + ++ + S N I P G ++ + LA+ Sbjct: 464 GDLNNEESLIPLMQDLLKEISSPCHIDNHHIVVTASIGISLFPNDGNDSITLLRNADLAM 523 Query: 503 SSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAE 562 + H +F F + + + +++R A+E GEL L YQP V + + I+G E Sbjct: 524 YQSKRH-KGDFTFYSSDMNQHAVKILELEKDLRQALERGELLLHYQPKVSLQSGKIVGCE 582 Query: 563 ALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHI 622 AL RW RG++SP FI +AE+ G I +G +++ A + S + + + Sbjct: 583 ALIRWQHPLRGLVSPADFIPLAEETGLIVPIGTWVLEQACQQAI--SWQQQQLPTITMAV 640 Query: 623 NVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRI 682 N+S Q + + TI++ L + L +EITE++I E + L+++GV + Sbjct: 641 NLSSRQFRHGNLCDVVDTILETTTLHPDLLDLEITESMIMDDPEGAVQTMIALKERGVLL 700 Query: 683 SIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAE 740 S+DDFGTG S+L D +K+D+ F D+ + + I D+A + + +AE Sbjct: 701 SLDDFGTGYSSLNYLRRFPVDCLKIDASFIRDVAQDSSSAAVAVSIVDIAHHLGLTTVAE 760 Query: 741 GVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 GVE+ + L K C QGYLY +P+P + Sbjct: 761 GVETVEQLDFLEKCHCDILQGYLYSRPLPAEDF 793 >UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNY7_9PROT Length = 1003 Score = 594 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 106/468 (22%), Positives = 192/468 (41%), Gaps = 36/468 (7%) Query: 337 KIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES-------- 388 +I +++ + I K +E K+ L +D +G + +E Sbjct: 497 RIAPHGPDKVVVVVRDITLQKHSE----EKIRRLAYFDTLTGLPNRQSFLERLDRELLRA 552 Query: 389 -NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVT-------- 439 N +A+ + L G + + G + +++ + R+ EK I Sbjct: 553 RRTNHRMALLFLDLDGFKRINDTLGHSAGDCLLQTVADRLQEKLRAGAFIARPALDESSL 612 Query: 440 ----FNADLYLLLCR-----ENVQTFTRKIAMVNDFDSSFGYRNLRI--HKSAICEPLQG 488 D + ++ E ++I + + G + + + P G Sbjct: 613 HFARLGGDEFTVVLPDVDTVETACLIAQRIQELLGRPTLIGEQEIAVTSSIGIALFPDDG 672 Query: 489 ENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQ 548 +A + + A+ ++ + + D + + +IR +E GE L YQ Sbjct: 673 ADAATLLKHADTAMYYAKEQGRNNWQLYDRTLTTRTTARLALEGDIRKGLERGEFRLFYQ 732 Query: 549 PIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHF 608 P V + I+G EAL RW ++G++SP +FI +AE+ G I +G ++ A + R + Sbjct: 733 PQVSADDGTIVGVEALIRWQHPQQGLVSPARFIPVAEESGLIVPIGEWVLTAACRQVRQW 792 Query: 609 SQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHF 668 Q + +NVS QL F + I+ G+ A+ L +E+TE+++ Sbjct: 793 QQSGVPVP--RVAVNVSARQLGAAGFLDTVAAIIVATGIAADRLELELTESILMDPEAKR 850 Query: 669 YLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRII 726 + +LR GV SIDDFGTG S+L ++K+D F + A I I Sbjct: 851 IKGLSRLRAMGVHFSIDDFGTGYSSLSYIKRFPIGTLKIDQSFVHGLPQDADDAGITTAI 910 Query: 727 FDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 +AR + V+AEGVE+ + L + C + QGYL+ P+P + Sbjct: 911 ISMARSLNLEVVAEGVETREQLAFLQRALCPKLQGYLFSYPLPPDEME 958 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 594 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 105/465 (22%), Positives = 204/465 (43%), Gaps = 29/465 (6%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---- 388 I +++ +G +S ++ K A+ ++ L YD +G + + Sbjct: 543 ISSVRDGDGVVTHYVSALTDMSAHKAAQ----EEIRHLAFYDALTGLPNRRLLHDRLRVA 598 Query: 389 -----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + + A+ I L + + G D +++++++ QR++ + + D Sbjct: 599 IASSVRSERQGALLFIDLDNFKTLNDTLGHDMGDRLLQQVGQRLSSSVREGDTVARLGGD 658 Query: 444 LYLLLCRENVQTFTRKI--------AMVNDFDSSFGYRNLRIH----KSAICEPLQGENA 491 ++++ + ++ + + H Q Sbjct: 659 EFVVMLENLGERPEEAAGQSRIVGEKIIKLLNRPYDLSGHDYHNTPSVGITLFGGQQVGI 718 Query: 492 WSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIV 551 ++ LA+ + + F D + I +++R A+ FL YQP V Sbjct: 719 DELMKRADLAMYEAKASGRNALRFFDPRMQAVVTARADIEKDLRAAVGRQSFFLAYQPQV 778 Query: 552 DINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQR 611 D + ++GAEAL RW +RG +SP +FI +AE+ G I LG +++TA + ++ R Sbjct: 779 D-ASGQVIGAEALLRWQHQQRGTVSPAEFIPVAEETGLILPLGLWVLETACAQAALWAAR 837 Query: 612 ASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLN 671 ++ F + +NVS Q + +F ++ ++ +G +L +E+TE+++ + Sbjct: 838 -PGRERFTVSVNVSARQFRQANFVDQVLAVLARSGAHPRNLKLELTESMLLDNVQDIIAK 896 Query: 672 IEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDL 729 + L+ +GV S+DDFGTG S+L ++ D +K+D F D+ I R I L Sbjct: 897 MSALKARGVGFSLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDLLTDPNDEVIARTIIAL 956 Query: 730 ARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 AR + VIAEGVES + L GC+ QGYL+ +P+ + ++ Sbjct: 957 ARTLGLSVIAEGVESVEQQDALAAQGCLAYQGYLFSRPLALADFE 1001 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 594 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 103/458 (22%), Positives = 197/458 (43%), Gaps = 25/458 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE----- 387 I A+ + I + I+ K E KL + YD + ++ Sbjct: 360 ISAVMDDKNHLINYICVFEDISVRKAHE----EKLQRMAFYDPLTNLPNRTHLLSLLEQH 415 Query: 388 ----SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 N Q A + + + + G ++++ KL R+ + + D Sbjct: 416 IETGHKNQQTFATLFLDIDHFKHINDSMGHFCGDQLLSKLAIRLQDILHLNAHVARIGGD 475 Query: 444 LYLLLCRE---NVQTFTRKIAMVNDFDSSFGYRNL-----RIHKSAICEPLQGENAWSYA 495 ++++ + +V +++ F F N P G+++ + Sbjct: 476 EFVIILPDVHSDVALLETVGDILSVFQQPFDLANHDSLRVSTSIGIALYPRDGQDSETLL 535 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 + A+ + + + + F ++ ++ I + A+E +L L +QP ++ Sbjct: 536 KNADTAMYLAKKNGRNGYAFYSPDLTDKSVSHVRIQSALHQAIEKQQLRLEFQPQYNLEQ 595 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 AI+G E L RW E G++ P FI IAE G I +G ++ A + + ++ Sbjct: 596 HAIVGVETLLRWQHPEFGLVPPADFIPIAEKTGLIQSIGEWVLLHACQQGNAWLEQGVEF 655 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 + +NVS QL + +F +R + I+ + G A L +EITE+ + + ++ QL Sbjct: 656 G--RIAVNVSALQLQQSNFIQRLSDILNQTGFPAQRLDLEITESFLLIDPQQAIASLNQL 713 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYN 733 R+ G+ IS+DDFGTG S+L + + +K+D F D+ + IV I + + Sbjct: 714 RELGIEISLDDFGTGYSSLSYLKGLPINKLKIDRSFVSDVPSNSDSNAIVNAIIAMGKTL 773 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFS 771 + V+AEG+E+++ A L + GCV QGYL+ +P+ Sbjct: 774 SLKVVAEGIETQEQADYLFEKGCVYGQGYLFSRPVSAE 811 >UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IR9_DECAR Length = 952 Score = 593 bits (1530), Expect = e-168, Method: Composition-based stats. Identities = 113/466 (24%), Positives = 210/466 (45%), Gaps = 29/466 (6%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNN- 391 I A+ G+ I + ++E K AE +++ L YDQ +G + + E + Sbjct: 488 ISAVLGDSGEVTHYIGLHQDVSERKLAE----SRIHQLAYYDQVTGLPNRILLQERLSQV 543 Query: 392 --------QYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 Y + + L + + G + + +++++ + + + + D Sbjct: 544 MAKCRASSNYGVLLFVDLDNFKTLNDTLGHNVGDLLLKQVGEVLRRCSRESDTVARLGGD 603 Query: 444 LYLLLCRENVQTFTRKIA--------MVNDFDSSFGYRNL----RIHKSAICEPLQGENA 491 + ++ E + + ++++ +F N+ + A + E+ Sbjct: 604 EFAVIMSELGTDPSAAMQGAEAAARYLLSELGRTFQLGNVIHRNTVSIGATLFKGEQESI 663 Query: 492 WSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIV 551 S ++ LAI + + F D + + E I +R+A+E + L YQ + Sbjct: 664 ESLMRQIDLAIYQAKGAGRNTVRFFDPSMEIALRERAAIEEALRYAIEEEQFLLHYQAQI 723 Query: 552 DINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQR 611 I GAE L RW ERG++SP FI +AE+ G I LG ++K A + +++ Sbjct: 724 -GEDGRIEGAEVLLRWQHPERGMVSPAIFIPLAEETGDIVLLGSWVLKQAAAQLARWAE- 781 Query: 612 ASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLN 671 + + +L +NVS QL +P F E+ TT+++E G L +E+TE+++ E Sbjct: 782 SPVMAGLVLAVNVSAVQLRQPDFVEQVTTVLREAGADPGRLKLELTESMLVNDVEATIAK 841 Query: 672 IEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDL 729 ++ L+ G+ S+DDFGTG S+L + +K+D F D+ A I + L Sbjct: 842 MQSLKAIGIGFSLDDFGTGYSSLSYLKRLPLSQLKIDQSFVRDVLVDANDVAIASSVVAL 901 Query: 730 ARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 A+ + VIAEGVE+E L +GC QGYL+ +P+P +++ Sbjct: 902 AKSLGLGVIAEGVETEAQRELLAGIGCHCYQGYLFSRPLPIGDFER 947 >UniRef50_A1T0Y1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T0Y1_PSYIN Length = 727 Score = 593 bits (1529), Expect = e-167, Method: Composition-based stats. Identities = 113/461 (24%), Positives = 200/461 (43%), Gaps = 23/461 (4%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI-------- 385 + ++ I+ + I+E K E +L L YD +G Sbjct: 242 SPICKTNSESSGIVLVFQDISERKKTE----QQLTRLAQYDCLTGLPNRALFTSLLSQAI 297 Query: 386 -IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 LA+ + L + V G D + +++++ QR+ + + D Sbjct: 298 SRSDRRKNKLALLFLDLDRFKQVNDSLGHDVGDLLLQQVAQRLQLATLEGGTVSRLGGDE 357 Query: 445 YLLLCRENVQTFTRKIA----MVNDFDSSFGY--RNLRIHKSAICEPLQGEN--AWSYAE 496 ++++ E + M+ D+ F R + I S G S + Sbjct: 358 FMVILEEVNSESHKAAKLAQKMITSLDAPFNILGREVLISTSIGIALCSGSTQCIDSLLK 417 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 + +A+ ++ + F F + ++I + +RHA++ E FL YQP VD N+ Sbjct: 418 RADMAMYRAKEQGRNNFQFYTAELQQQASKSIELENRLRHALQRKEFFLHYQPQVDTNSG 477 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 I+G EAL RW + +ISP +FI +AE+ G I +G +++ A + + + L Sbjct: 478 QIIGLEALLRWQPDGQALISPEEFIPVAEEAGLIVPIGEWVLREACSQLHRWHRSGLLSP 537 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +N+S QL T I++E GLK + L +EITET + + + + + Sbjct: 538 TVKMAVNLSVRQLEHTSLLSTLTQILQETGLKPSQLELEITETAVMKDPDLVVNILHSIH 597 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNR 734 G+++S+DDFGTG S+L+ + +K+D F DI G I+ I L+R Sbjct: 598 AMGIQLSLDDFGTGYSSLRYLKLLPLHVLKIDRSFINDIGGKQRDQAILESIIYLSRNLD 657 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 + V+AEGVE+++ L + C QGY KP + +K Sbjct: 658 LTVVAEGVETQEQLDFLSRFNCHSIQGYYISKPKSAANIEK 698 >UniRef50_A0L8P4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8P4_MAGSM Length = 754 Score = 592 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 109/461 (23%), Positives = 204/461 (44%), Gaps = 28/461 (6%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE----- 387 I A++ + G+ + I I + I+E K E+ KL L YD + M + Sbjct: 278 INAVRNQAGEVENYIGIFSDISESKATEL----KLERLAYYDALTQLPNRMLFHDRLEHE 333 Query: 388 ----SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + + +AV I L + V G +++++ + QR+ + D Sbjct: 334 FYNAQRHRKQVAVFFIDLDRFKQVNDTLGHSAGDELLQHVAQRLEGCVRAADTVARMGGD 393 Query: 444 LYLLLCR-----ENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSY 494 + ++ E+V RK+ + + S + I P G + + Sbjct: 394 EFTVILADISDNESVARVARKV--LEELQKSISIKGHDIFVGASIGIALYPDNGNDVETL 451 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 + +A+ ++ + F + + + + + HA+ L + YQP +++ Sbjct: 452 TKNADMAMYRAKESGRGNYKFFSEEMNVSTSQRLSLESQLHHAVNANLLEVYYQPKLNMQ 511 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 + ++G EAL RW A+ +I P++FI +AE+ G I LG +++ AM + + + + Sbjct: 512 SGIMVGMEALVRWPQADGSMIPPIQFIPVAEETGLIVPLGRLVMRQAMLDCARWVRETGM 571 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 + + +N+S + P + E GL A VEITE+++ E+ +EQ Sbjct: 572 --NLRVAVNLSAREFQSPGLVVEIEQTLAECGLDARHFEVEITESLMMHDVENAIATLEQ 629 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARY 732 + + G+ I++DDFGTG S+L + S+KVD F DI +IV I LA+ Sbjct: 630 ISRLGIHIAMDDFGTGYSSLSYLKKFPIHSLKVDRSFVKDIPDDPNDIEIVAAILSLAKV 689 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 + V+AEGVE+++ L + C + QGY + KP+ + Sbjct: 690 LNLKVVAEGVETQEQLSFLRQNLCDECQGYSFSKPLSAVDF 730 >UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5Q6_AZOSB Length = 828 Score = 592 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 120/467 (25%), Positives = 210/467 (44%), Gaps = 27/467 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------- 385 I ++ EG+ +++ + I+++KDA+ ++L L YD +G + Sbjct: 348 IGTVRDDEGEVSNYVAVFSDISQIKDAQ----SQLERLAHYDPLTGLPNRALLGDRLAHA 403 Query: 386 --IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 +AV + L G + V G +++++ + +R+ + F D Sbjct: 404 ISRARRAGTSVAVLFLDLDGFKNVNDSLGHPAGDRLLQIIAERLCGALRSEGSVSRFGGD 463 Query: 444 LYLLLCRENVQTFTR---KIAMVNDFDSSFGYRNLRIHKSAICE----PLQGENAWSYAE 496 + ++ + V+ ++ + H SA P G++A + + Sbjct: 464 EFAVVLEDVVRGEAVSEVAEHLIAEIARPLDLDGHGAHVSASIGIALFPRDGDDATTLIK 523 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 A+ + + F F + + + +R A+E G L YQP +D+ T Sbjct: 524 AADTAMYRSKALGRNTFSFHHEDMAQAAHRRLSLEHGLRQALEQGRFELWYQPQIDLRTG 583 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 + GAEAL RW ERG++SP +F+ +AE+ G I +G +++ A R + Sbjct: 584 VLAGAEALLRWRDPERGLVSPAEFVPLAEETGLILPIGLWVLEEACRAGRAWLDVGLAPG 643 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +NV+ Q+ F + ++ +GL +L VEITE + R E+ L + LR Sbjct: 644 --RIAVNVAAPQIERGGFDQAVARVLSASGLPPAALEVEITEGSLLRSAENARLAVAALR 701 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNR 734 GV ++IDDFGTG S+L + ++K+D +F D+ AG I R I + R Sbjct: 702 ALGVGVAIDDFGTGYSSLAYLKNLAVQTLKIDREFVRDLPHDAGNLAITRAIIAMCRSLG 761 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP---FSAWDKSGK 778 V+AEGVE A L+ GC AQGYL+ KPMP F+ W ++ + Sbjct: 762 FGVVAEGVEEPAQAAFLVSEGCTLAQGYLFAKPMPGAEFAEWLRTYR 808 >UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B8HP13_CYAP4 Length = 1094 Score = 592 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 108/457 (23%), Positives = 197/457 (43%), Gaps = 24/457 (5%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNM--------AI 385 A++ R+G+ I+ K AE+ + +D +G A+ Sbjct: 618 RAVRDRQGNILYFEGTVEDISARKQAELT----IHYQAFHDLLTGLPNRALFDDRLNQAL 673 Query: 386 IESNNNQYL-AVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 ++ Q+L AV + L + + G +++++++ QR+ + I + D Sbjct: 674 ADARRYQHLLAVFFLDLDRFKVINDTLGHAIGDQLLQQVAQRLLPCLREIDTIARWGGDE 733 Query: 445 YLLLCRE---NVQTFTRKIAMVNDFDSSFGYRNLRIHK----SAICEPLQGENAWSYAEK 497 + LL + ++ F + +H P GE+ + Sbjct: 734 FTLLLPHVQTPADSVKIAERLLASLKPPFSLKGHNLHITASLGIALYPHDGEDGTTLLRN 793 Query: 498 LKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 A+ ++ + + E + + + A+E EL + YQP ++ T Sbjct: 794 ADAALYRAKEEGRNGLYCYTPMLNSRGHELLALESELHKALEQQELDVYYQPQINAATGE 853 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 IL EAL RW ++ G++SP FI +AE+ G I +G +++TA + R + R Sbjct: 854 ILRLEALVRWQHSQLGLVSPQTFIGLAEENGLIMPIGQWVLETACHQCRQWQARGF--PG 911 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK 677 +N+S Q +PH ++ ++ GL A+ L +EITET + + +L + Sbjct: 912 LGTAVNLSVRQFQQPHLVQQVAETLQYTGLAADRLELEITETTAMQNVNLTRTLLHELDQ 971 Query: 678 QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRI 735 GV I++DDFG+G S+L + SIK+D F ++ + IV+ + L R + Sbjct: 972 MGVGIALDDFGSGYSSLNYLRQFPLHSIKIDRTFIQELPYSVQDQAIVKAVIALGRGLNL 1031 Query: 736 PVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 V+AEGVES+ + L LGC QGY + P+ +A Sbjct: 1032 SVVAEGVESQSQLKVLRSLGCDIIQGYFFGPPIAAAA 1068 >UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodiesterase (EAL), with GAF and two PAS/PAC sensor domains n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CCD7_METED Length = 1028 Score = 592 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 106/489 (21%), Positives = 202/489 (41%), Gaps = 35/489 (7%) Query: 308 VFRRQFSEMTELVNTLAFLPDSTDQIEAL--------KIREGDAKEIISIKNSIAEMKDA 359 + F E++ ++ L + + + + +G ++ I E K + Sbjct: 517 LLTEHFGELSATYSSEHRLRSKSGEYTWVLGRGRVVARDEQGAPLRMVGTSIDITERKAS 576 Query: 360 EIERSNKLLSLISYDQESGFIKNMAIIE---------SNNNQYLAVGIIKLCGLEAVEAV 410 E ++ + +D +G E A+ + L +++ + Sbjct: 577 E----QRIAYMARHDVLTGLPNRTVFHEHLEQRLAEVRRGRGQAALLCLDLDRFKSINDM 632 Query: 411 FGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE-----NVQTFTRKI--AMV 463 G ++++ ++ R+ +V D + ++ +++ A+ Sbjct: 633 LGHPAGDELLCQIATRLRATVRGGDVVVRLGGDEFAIIVSHLDHARQASVLAQRVIDAVG 692 Query: 464 NDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNE 523 D + I P G+ + + + LA+ + + + F + Sbjct: 693 QPLDLGGHLVTVGISIGIAFAPTNGDTSETLFKNADLALYRAKASARNTYCFYEAGMDAA 752 Query: 524 IEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITI 583 +E + + +R A+ G L YQP++ + I+G EAL RW +RG+I+P +FI Sbjct: 753 VEARMQLEFEMREAITCGSFALHYQPVLRLADHRIVGFEALMRWPHPKRGMIAPDEFIPS 812 Query: 584 AEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMK 643 AE+ G I LG ++ A E + D + +NVS Q +P + + + Sbjct: 813 AEETGLIVPLGSWALQEACREAASW------PDHLRIAVNVSAVQFQQPGLEQGVMSALA 866 Query: 644 ENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPD 703 +GL + L +E+TE+V+ + E + +L+ GVRI++DDFGTG S+L D Sbjct: 867 ASGLAPHRLVLEVTESVLVQDAEAVIACLHRLKSLGVRIALDDFGTGYSSLSYLRRFPFD 926 Query: 704 SIKVDSQFTGDIFG-TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGY 762 IK+D F +I A IVR + +A V AEGVE+ ++ GC++ QGY Sbjct: 927 RIKIDRSFISEIGDPGAAAIVRAVVGIAMQLGATVTAEGVETTAQLEQVRSEGCMEVQGY 986 Query: 763 LYQKPMPFS 771 L +P+P Sbjct: 987 LVSRPLPAD 995 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 592 bits (1527), Expect = e-167, Method: Composition-based stats. Identities = 104/465 (22%), Positives = 188/465 (40%), Gaps = 27/465 (5%) Query: 335 ALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE------- 387 ++ G A ++ +A+ + L +D +G + + Sbjct: 579 SVTFDAGRAACFSLFVRDLSRRDEAQ----EHIRRLSHFDTLTGLPNSSLFADLLRQAIG 634 Query: 388 --SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLY 445 + + L+V I + + + G ++++ ++ R + D + Sbjct: 635 NAQRSGESLSVMYIDIDHFQHINDTLGHRIGDRLLVEIAGRFRNALCAENTLARLGGDEF 694 Query: 446 LLLCRENVQTFTRKIA--MVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLK 499 L+L +A ++ + + P GE+ + ++ Sbjct: 695 LILLPHAQVECAAHVAEKLIVAAADPMLIEDHEMLVTPSIGIAMYPADGEDFETLLQRAD 754 Query: 500 LAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT-RAI 558 A + + + + F + + +R A+E EL L YQP +D+ + Sbjct: 755 TATNRAKSDGRNTYRFFAPEMQLRSAHTLRLETALRRALERNELVLHYQPQIDLVDFGRV 814 Query: 559 LGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDF 618 G EAL RW E G++SP +FI IAE G I +G +++TA+ + + + Sbjct: 815 AGVEALIRWQHPEFGLVSPAEFIPIAESTGLILPIGEWVMQTALLQLKAWQLAGLQLG-- 872 Query: 619 LLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQ 678 + +N+S Q + + I+ E GL A+ L +E+TE+ + ++ L + Sbjct: 873 QVGVNLSAHQFRQQNLPATVARILAEAGLPASCLELELTESAMMDDPVAAVAMMDALHRD 932 Query: 679 GVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIP 736 GVR+SIDDFGTG S+L D +K+D F D+ IV I LAR R Sbjct: 933 GVRMSIDDFGTGYSSLNYLKRFRIDKLKIDQSFVRDLTQDPEGEAIVEAIVSLARTLRFR 992 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA---WDKSGK 778 IAEGVE + L GC + QGYL+ +P+P W ++ + Sbjct: 993 TIAEGVEKPEQLAFLRASGCQEVQGYLFSRPLPPDELAVWLRAWR 1037 >UniRef50_A1SZV0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV0_PSYIN Length = 711 Score = 592 bits (1527), Expect = e-167, Method: Composition-based stats. Identities = 106/475 (22%), Positives = 201/475 (42%), Gaps = 42/475 (8%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES----- 388 E G AK + + E+ A+ +++L L +D +G A + Sbjct: 233 EVFYDENGAAKVVSGTVVDVTELTQAQ----DQILQLAHFDSLTGLANRNAFRKRVELAM 288 Query: 389 ----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIV------ 438 AV + L + + G +++++++ +R+ + I Sbjct: 289 ERAKQYGHLGAVLFLDLDNFKRINDTLGHSIGDQLLQEVARRLTDIVRGSDSICGTNFNH 348 Query: 439 --------TFNADLYLLLCRE-----NVQTFTRKIAMVNDFDSSFGYRNLRI----HKSA 481 D + +L E + + R++ +N I Sbjct: 349 AIDDNLISRLGGDEFTVLLPEIGKIKDAEHAARRV--LNSIGDIINLSGHDIVVTPSIGI 406 Query: 482 ICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIG 541 P GEN S + A+ ++ +++ ++ + + + +RHA++ Sbjct: 407 AIFPHHGENVDSLLKNADAAMYYVKRAGKNDYELFVNSMNVVAKRRLELESFLRHAIDNK 466 Query: 542 ELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTA 601 EL + YQP +DI T I+GAEAL RW SAE G++SP++FI IAE+ G I+ +G +++ A Sbjct: 467 ELSVNYQPQIDIPTGRIIGAEALLRWNSAELGMVSPVEFIPIAEETGLISPIGEWVLREA 526 Query: 602 MGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVI 661 + + + + + +N+S Q + + + ++ E GL + L +EITE ++ Sbjct: 527 CRQVKEWRDDGL--PEIQIAVNISVQQFAKQSLDKLVSKVLLETGLPVHCLELEITENML 584 Query: 662 ERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TA 719 E + +L+ G+ ++IDDFGTG S+L D +K+D F + + Sbjct: 585 MDDVEGAVETLHKLKDLGINLAIDDFGTGYSSLSYLKRFPIDKLKIDRSFITYVTTEPSD 644 Query: 720 GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 + + I +A + VIAEGVE L + C + QGY + +P+ S + Sbjct: 645 AAVTQAIISMAHNLGLTVIAEGVEEASQLEFLRQHHCEEMQGYYFSRPLIASDME 699 >UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31M30_SYNE7 Length = 917 Score = 592 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 156/713 (21%), Positives = 281/713 (39%), Gaps = 55/713 (7%) Query: 85 VILKMEMMPFLDSVGLVLDDNKYY---LFSRRANDKIVVYHQEQVNGPLV-DESGRVIFA 140 ++ E L VG + D + + + + + V + NG LV DE G V+FA Sbjct: 224 LLHHDETGELLSLVGNIRDITEEHHILSLVQDSETRFQVLIESNPNGILVLDEQGAVLFA 283 Query: 141 DFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNW 200 + D S + Y P ++ L + D L V+ V + W Sbjct: 284 NHVA-----EQVFDQSLSELQGKY--LGLPLTLNVTVQLDLVQPDGSLRYVEVSIVPIPW 336 Query: 201 RYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDT-EYIEKT 259 + YL ++ ++ L+Q + + Q A E NS + I + EY+ Sbjct: 337 QQSKAYLALLT---DITSLQQTQQRLKLLQEATE-----NSPASILITSAEGIIEYV--- 385 Query: 260 SAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTEL 319 N FE+ Y ++ + + + +T R E+ Sbjct: 386 -----NPAFELMTGYGADEVIGKNPRFLKSGLMSPSFYQDLWETITAGETWR--GELYNR 438 Query: 320 VNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGF 379 T D T I +K G +++K I E K L +YD + Sbjct: 439 RKTGELFWDRT-SISPVKDLAGQIIHFVAVKEDITEQKR----NRELLDHQANYDSLTDL 493 Query: 380 IKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEK 430 ++ +N + V ++ L + + G + +++++ +R+ Sbjct: 494 PNRSLALDRLRQATALSERSNDTVIVMLLDLDRFKNINDTLGHSYGDCLLQEIAKRLRYH 553 Query: 431 YAQCCDIVTFNADLYLLLC---RENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAIC 483 + I D +L++C +EN+ ++ + C Sbjct: 554 LPREITISRLGGDEFLIICPAVKENIHLEKLSQQLLKIISQPITIEAEELVITASIGVAC 613 Query: 484 EPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGEL 543 P G A+ S + + ++F E I + ++RHA+E +L Sbjct: 614 YPNDGVTPEVLMRNADTAMYSAKRNGGNDFQLFMPTMNAEAHARIQLETHLRHALEQYQL 673 Query: 544 FLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMG 603 + YQPI+ + ++G EAL RW E G I P +FI IAE+ G I LGY++I+ A Sbjct: 674 KVFYQPIISLQDNHVVGLEALARWHDPELGNIPPDRFIPIAEETGLIIPLGYRVIEQACQ 733 Query: 604 EFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIER 663 + + Q+ + F + +N+SP QL F + I++ + + N L +E+TE ++ Sbjct: 734 DVAIWQQKYNY--PFWVAVNLSPRQLRSNRFTQITAKILQRHNFRPNYLKLEVTEQMLLD 791 Query: 664 INEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGK 721 ++ L ++G+ +++DDFGTG S L S+KVD F DI + + Sbjct: 792 NTSTIAQMLDTLHRKGIALALDDFGTGYSALSYLRRYPFQSLKVDQSFLRDIPHSTESCA 851 Query: 722 IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 +V+ I +A + +AEGVE+ + L +GC QGY + +P+P D Sbjct: 852 LVKTIVAMAHGLGMQAVAEGVETAEQVEFLKAIGCEYGQGYWFSRPLPAVEID 904 >UniRef50_B2UIB3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=8 Tax=Ralstonia RepID=B2UIB3_RALPJ Length = 916 Score = 592 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 139/596 (23%), Positives = 235/596 (39%), Gaps = 36/596 (6%) Query: 206 YLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNN 265 +LD ++ V K E R +L I N II + +A N Sbjct: 319 FLDDVTHLAGVAIQKDNVERGLAESEERYRLAISNLHEGVVII----SPDGVVQAA---N 371 Query: 266 ALFEIYFYYPGGNLLNASD----KLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVN 321 A E G L+ + + + I ++ R F + L+ Sbjct: 372 ASAERILRVRPGQLVGRNRLDPIQRVVDEYGKEIGSTMMPSGQVLRTGEPIFGRVYGLLL 431 Query: 322 TLAFLPDSTDQIEALKIR-EGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI 380 L I ++ E ++ I ++K AE +L L ++D +G Sbjct: 432 KTGELMWVRQNIIPIRRHAEPTPSSVMLSFADITDIKRAE----QRLRHLAAHDALTGLT 487 Query: 381 KNMAIIE---------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKY 431 I + ++ LA+ + L ++V G + +++ R+ + Sbjct: 488 NRSFFIAHLESAIESARDESRELALFFLDLDRFKSVNDTAGHACGDTLLQSAAARLTDCI 547 Query: 432 AQCCDIVTFNADLYLLLCRENVQ-----TFTRKI--AMVNDFDSSFGYRNLRIHKSAICE 484 I D +++L + V+ ++ AM FD+ G L + Sbjct: 548 GPGDVIARLGGDEFVILIDQRVEGKRIALLAERLLQAMREPFDTVNGRYYLGVSIGVALY 607 Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELF 544 P G + A+ + + + F ++ + +R A E EL Sbjct: 608 PHDGISGSDLLRSADAAMYRAKQNGRNRAQFYTAELNARLQRRYMLENALRDARENNELQ 667 Query: 545 LVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGE 604 LVYQP D+ + I+GAEAL RW SA+ G ISP++FI +AE+ G I +G +++ A + Sbjct: 668 LVYQPKYDLASHRIVGAEALLRWNSAKLGAISPVEFIPVAEETGLIVPIGAWVLRRACEQ 727 Query: 605 FRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERI 664 + + +L DF + +N+S Q + ++GL +L VEITE+++ Sbjct: 728 AVIWYE--ALGYDFRMAVNLSARQFQAGDVVPMIEQTLADSGLPPTALEVEITESLLMGG 785 Query: 665 NEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KI 722 + + L QG+RISIDDFGTG S+L ++K+D F I + Sbjct: 786 ADEVRPMFDALTAQGIRISIDDFGTGYSSLSYLQRFPISNVKIDRSFITGIPHDPDSVAL 845 Query: 723 VRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 I +AR + V AEGVE D L K GC + QGY KP+ +D+ + Sbjct: 846 TEAIVAMARALGMTVTAEGVEDADQVEFLAKAGCQEIQGYYIGKPVTAEGFDRLLR 901 >UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=12 Tax=Rhizobiales RepID=Q07P60_RHOP5 Length = 834 Score = 592 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 106/451 (23%), Positives = 186/451 (41%), Gaps = 31/451 (6%) Query: 342 DAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKN-------MAIIESNNNQ-Y 393 + + + E + AE ++ + +D + +E+ + + Sbjct: 381 RSDGFLVAIVDVTERRKAEA----RIAHMAHHDGLTNLPNRSFYQERLQHALEARPAECH 436 Query: 394 LAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC---- 449 +AV + L + V FG +++++ + +R+ + + D + ++ Sbjct: 437 VAVLCVDLDLFKNVNDSFGHPVGDRLLQLVAERLRLEVRGANMVARLGGDEFAIVLVSVV 496 Query: 450 -RENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISS 504 F ++ + + L + P G+N +A+ Sbjct: 497 SPNEASDFAARV--IERLSVPYDVDGLEVVIGASIGIALSPGDGDNGEDLLRNADMALYR 554 Query: 505 IRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEAL 564 ++ F + + ++ + ++R+A G+ L YQP+VD+ + G EAL Sbjct: 555 AKESGGGNHHFFEKEMDRQAQKRRDMEIDLRYAFAKGQFELYYQPLVDVARDRVAGFEAL 614 Query: 565 CRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINV 624 RW ERG+ISP FI +AEDIG I LG +++ A E + + + +N+ Sbjct: 615 LRWRHPERGMISPADFIPVAEDIGLIVGLGEWVLRQACAEAATW------PSEIKIAVNL 668 Query: 625 SPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISI 684 SP Q + + + ++GL L +EITE+V E + Q+R GVRIS+ Sbjct: 669 SPVQFRSRNLVQAVIGALAQSGLSPRRLELEITESVFLAETEANLATLHQMRDLGVRISM 728 Query: 685 DDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGV 742 DDFGTG S+L D IK+D F D+ IVR I L R I AEGV Sbjct: 729 DDFGTGYSSLSYLRSFPFDKIKIDRSFVQDLAQRPDCLAIVRAIAGLGRSLNITTTAEGV 788 Query: 743 ESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 E++ L + GC + QG+L+ P Sbjct: 789 ETQAQLDWLREEGCNEVQGFLFSPARPAGEI 819 >UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPG4_9GAMM Length = 862 Score = 592 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 115/468 (24%), Positives = 204/468 (43%), Gaps = 25/468 (5%) Query: 326 LPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI 385 L +S D L R KE + +S+ M D ++ +L +D + M Sbjct: 394 LEESVDSWTKLDTRHLHFKEFKHLASSVNSMIDGLNMQAEELRHRAFHDHLTSLPNRMHS 453 Query: 386 IES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCD 436 + A+ I L + + G ++++RK+ QR+ + Sbjct: 454 STQLDLMISHTIKHQATAALLFIDLDHFKEINDTLGHSTGDELLRKVSQRLRRSVREEDI 513 Query: 437 IVTFNADLYLLLC-----RENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICE----PLQ 487 + D + ++ R + ++ +K ++N+ + + +A P Sbjct: 514 VARLGGDEFTVITGVLETRSDAESIAQK--LLNELIRPYLIDGNELSVTASIGVSFFPED 571 Query: 488 GENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVY 547 G+N+ A+ + + + + A EI E + +R A+ EL L + Sbjct: 572 GDNSEILLRNADSAMYEAKRNGRNGYRLYTSAMTEEISERFALTEELREAISREELELYF 631 Query: 548 QPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRH 607 QP VDI T +ILGAEAL RW +RG+I P +FI IAE G + ++G +++ + Sbjct: 632 QPQVDIRTGSILGAEALLRWNHPQRGMIPPDRFIPIAESSGQMIKIGAWVLEQVCAKVAG 691 Query: 608 FSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEH 667 + +R + + +N+S Q E+ T ++ + L +EITE+ + E Sbjct: 692 WKERGIVAP--KIAVNISNQQ-MNRELVEQITELLASSKCDPACLELEITESCLMENPEQ 748 Query: 668 FYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRI 725 + L+ GV I+IDDFGTG S+L ++ + +KVD F D+ I R Sbjct: 749 MAHELSSLKALGVGIAIDDFGTGYSSLSYLKQLPINKLKVDRSFVSDLQDDENDLAITRA 808 Query: 726 IFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 I + + + VIAEG+E+++ L+KL C + QGY Y KP+P + Sbjct: 809 IVAMGQSMNLNVIAEGIETQEQIDLLLKLECFEGQGYFYSKPLPEEQF 856 >UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIL1_9PROT Length = 576 Score = 591 bits (1525), Expect = e-167, Method: Composition-based stats. Identities = 116/461 (25%), Positives = 198/461 (42%), Gaps = 28/461 (6%) Query: 335 ALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES------ 388 + G +I + I E AE ++L + +YD +G + + Sbjct: 119 PICDTSGKPLYLIGMFVDITERHRAE----QRILEMATYDILTGLPNRALLKDRIERALE 174 Query: 389 ---NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLY 445 N Q +A+ I L + + G D +K+++ + R + D + Sbjct: 175 HGNRNRQRVALLFIDLDNFKVINDSLGHDVGDKLLQAVAARFVSIVRGEDTVARQGGDEF 234 Query: 446 LLLCRE-----NVQTFTRKIAMVNDFDSSFGYRNLRIHKS----AICEPLQGENAWSYAE 496 ++L + + +KI +N F +H S P GE+ W+ Sbjct: 235 IVLLSNLESAFDAEAVAQKI--LNALQLHFLIDGKELHISGSIGISLFPDDGEDIWTLLR 292 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 +A+ + + + F + +E + +R+A++ EL L YQPIV++N Sbjct: 293 NSDIAMYHAKKNGRNNCEFFKPEMNRQAKERHSMEVALRNALKRDELLLHYQPIVNVNGG 352 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 G E L RW G+I P+KFI +AE+ G I +G +++ + + + + ++ Sbjct: 353 KADGFEVLLRWQHPGDGLIYPVKFIRLAEETGMIIPIGEWLMRQSCLQIKAWQEQGYEVP 412 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 L IN+S Q + E I+ E G+ + L +EITE+ + E + QL Sbjct: 413 --RLAINLSAIQFRQKTLMENIVRILDETGVTGHYLTLEITESELIEDVEETIKTLRQLS 470 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNR 734 + G+ ISIDDFGTG SNL +++K+D F DI I+ I +A Sbjct: 471 ELGIEISIDDFGTGYSNLSFLKRYQINTLKIDRSFVRDIPDDPDDTAIIDAILVMAHALG 530 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 + VIAEGVE+E L GC + QG+ + KP+P +K Sbjct: 531 LQVIAEGVENEQQLAYLALHGCTRFQGFYFSKPLPAIEIEK 571 >UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT6_BREBN Length = 816 Score = 591 bits (1524), Expect = e-167, Method: Composition-based stats. Identities = 109/456 (23%), Positives = 203/456 (44%), Gaps = 26/456 (5%) Query: 340 EGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE---------SNN 390 EG+ I I E E K+ L +D+ + + S + Sbjct: 355 EGEVVGNHIIVKDITE----ENRVKEKIRYLAYHDELTDLPNRRKFNQVLHQSIEKSSQD 410 Query: 391 NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKY-AQCCDIVTFNADLYLLLC 449 + AV +I + + + G + ++ + RI++ I D + +LC Sbjct: 411 SSSFAVMVIDIDRFKMINDSLGHSYGDIFLQGVSDRISKSAKGYHATIARMGGDEFTILC 470 Query: 450 R---ENVQTFTRKIAMVNDFDSSFGYRNLRIHKSA----ICEPLQGENAWSYAEKLKLAI 502 + + + ++ F ++ + SA P G +A + +K A+ Sbjct: 471 ETGADGREAASLADKIIEALKQPFTLKDSEFYISASIGTAIFPDHGTDAVALLKKADTAM 530 Query: 503 SSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAE 562 ++ + +F ++ ENI I R++R A+E EL + YQP + ++G E Sbjct: 531 YEVKKQGKNGHLFYTTDFDAQLLENIEIERDLRKAIERKELVVYYQPQFHSESNRMIGVE 590 Query: 563 ALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHI 622 AL RW +G++SP FI IAE+ G I E+G +++ A + + + + + + Sbjct: 591 ALVRWNHPTKGMLSPGVFIPIAEETGLIYEIGTWVLREACRQMKQWHDKGG--PLIPVSV 648 Query: 623 NVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRI 682 N+S Q ++ + + I++E L + L +EITE+++ + +L K G RI Sbjct: 649 NLSSHQFHQRNLVQYIKNILEETKLAPHFLELEITESMMM-DPAVSISILHELNKIGTRI 707 Query: 683 SIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAE 740 S+DDFGTG S+L + +K+D F D+ IV I +A++ ++ VIAE Sbjct: 708 SLDDFGTGYSSLSYLKKFPIHKLKIDRSFITDLSRNENDKAIVATIISMAKHLKLDVIAE 767 Query: 741 GVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKS 776 G+E++D L + C + QGY Y +P+ + ++S Sbjct: 768 GIETKDQLDILTENHCKEIQGYYYSRPLSANEVEQS 803 >UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Shewanella RepID=A6WKV6_SHEB8 Length = 921 Score = 591 bits (1524), Expect = e-167, Method: Composition-based stats. Identities = 113/467 (24%), Positives = 212/467 (45%), Gaps = 28/467 (5%) Query: 329 STDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII-- 386 I + GD + +++ I+ K+ E +L L +D + M + Sbjct: 459 QNITISTIYDEVGDVRYFVAVFADISAQKENEA----QLTHLAYFDPLTHLPNRMKFMMQ 514 Query: 387 -------ESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVT 439 N LA +I + + + FG ++++ +L +R+ + + Sbjct: 515 LKQEVRQAKRLNLQLATVMIDVDLFKHINDSFGHSIGDEMLVELAKRLRSQVGDQDVLSR 574 Query: 440 FNADLYLLLCR--ENVQTFTRKI-AMVNDFDSSFGYRN-----LRIHKSAICEPLQGENA 491 D ++ L +N + T I + F+ F L P G +A Sbjct: 575 IGGDEFVALISGIDNNEDATVAINQLRQVFEQPFIVSTGDHLRLTASMGVSLYPNDGTDA 634 Query: 492 WSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIV 551 + A+ ++ + + F ++ + E++ + + A+E L+L+YQP + Sbjct: 635 DTLLRNADAAMYRAKNDGRNNYAFYTESLTQQSFEHLKLQSALYGAIEQNALYLMYQPKL 694 Query: 552 DINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQR 611 D+ +R +G EAL RW + G+ISP FI +AE IG I+E+G +++TA + + + Sbjct: 695 DLVSRKTVGFEALLRWHDPQLGLISPAVFIPVAEKIGLIHEIGLWVLETACRQGMRWLRE 754 Query: 612 ASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLN 671 K + +NV+ QL F + ++ E GL A L +E+TE+V+ + + + Sbjct: 755 G--KHFGRIAVNVAGQQLQRSSFVDDVKRVLAETGLPAKHLELEVTESVMMQNPDLAIRD 812 Query: 672 IEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDL 729 +++L G+ +S+DDFGTG S+L ++ +K+D F DI I + + L Sbjct: 813 LKRLGDLGIELSVDDFGTGYSSLNYLKKLPIHKLKIDQSFVRDIPFDTNNTAIAKAVIAL 872 Query: 730 ARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKP-MP--FSAW 773 ++ +IAEGVE+++ A L + C QAQGYL+ +P +P A+ Sbjct: 873 GHALKLDIIAEGVETKEQADFLQQNQCDQAQGYLFSRPQLPEDLDAF 919 >UniRef50_C7LQR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=C7LQR9_DESBD Length = 1262 Score = 591 bits (1524), Expect = e-167, Method: Composition-based stats. Identities = 107/462 (23%), Positives = 195/462 (42%), Gaps = 28/462 (6%) Query: 341 GDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES----------NN 390 G+ I I I+E K+ E ++ +D +G E Sbjct: 801 GEITNIFWIYQDISERKEFE----RQITHQAFHDSLTGLPNRSLFRERLGRAVERTKRRP 856 Query: 391 NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR 450 + + A +I L + V G + ++ ++ R+ + D + +L Sbjct: 857 DYHFAAMLIDLNKFKWVNDSLGHQAGDALLVEIASRLKSCVRSVDTVARLGGDEFAILLE 916 Query: 451 E---NVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAIS 503 E N + + + N+ +F + I + + A +A+ Sbjct: 917 EFRTNKEVISVASRIQNEVRRAFLWNGKEIVSGASVGIVLQTRDCAGAEDILRDADIAMY 976 Query: 504 SIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEA 563 ++ +F + E+ E I + +R A+E L L YQPI D++ + G EA Sbjct: 977 KAKERGRGHLVFHNR-MRQEVLEVINMENELRRAIEGNSLELHYQPIFDVDGGKLEGFEA 1035 Query: 564 LCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD-DFLLHI 622 L RW E G+I P +FI +AE+ G I LG ++ A + + + + + + + Sbjct: 1036 LVRWRHPEHGMIMPDRFIPLAEESGLIVPLGQWVVNAACRQLKSWDDESGTAEYGLTMSV 1095 Query: 623 NVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRI 682 N+S Q + + ++EN + L +EITE+ I + +L++ GV + Sbjct: 1096 NLSCKQFAQHTLVDMILRALRENDIAPPRLKLEITESAIILDPAAAAEKLRRLKEIGVLL 1155 Query: 683 SIDDFGTGLSNLKRFYEINPDSIKVDSQFTG--DIFGTAGKIVRIIFDLARYNRIPVIAE 740 ++DDFGTG S+L + D +K+D F D +IVR I D+A + V AE Sbjct: 1156 AVDDFGTGYSSLSYLRQFPMDILKIDRSFISGTDTPKENAEIVRSIVDMAHSLGLRVTAE 1215 Query: 741 GVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE 782 GVE+++ L + C +AQGY++ KPM +G ++++ Sbjct: 1216 GVETQEQLERLQSINCDRAQGYMFSKPMAPGD---AGDMIRQ 1254 >UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Geobacter RepID=C6E7Z7_GEOSM Length = 721 Score = 591 bits (1524), Expect = e-167, Method: Composition-based stats. Identities = 108/509 (21%), Positives = 217/509 (42%), Gaps = 29/509 (5%) Query: 289 LPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIIS 348 + F+++ ++ Y + ++ + + +L++++ + S + A+++ + EI Sbjct: 185 VTLLFMLVTVIAAYFFSAKLQQMISRPLLDLLSSMKDVSASKN--YAIRVAKPSDDEIGL 242 Query: 349 IK-------NSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQ 392 + + I E +R L L YD + + N Q Sbjct: 243 LYDGFNEMLSEIEERNQILRQRQAHLQQLAHYDPLTRLPNRTLFYDRLAQALNQAERNRQ 302 Query: 393 YLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCREN 452 L+V I L + + G + ++ + R++ C + D + + + Sbjct: 303 ALSVIFIDLDHFKDINDTLGHRTGDLLLIDVANRLSTVVRSCDTVARLGGDEFTVFTQNV 362 Query: 453 VQTFTRKIAMVND---FDSSFGYRNLRIHKSAICE----PLQGENAWSYAEKLKLAISSI 505 + I F F I+ +A P G+ +A+ Sbjct: 363 MNADNAAIVAAKLNALFAKPFQLGESEIYVTASIGVTLFPNDGKTVDELLMNADIAMYHA 422 Query: 506 RDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALC 565 + + + D E + + ++R A+E E L YQP VD+ T + EAL Sbjct: 423 KACGKNVYKMFDRKMNEHANERVTLLSDLRLALEREEFVLHYQPKVDLLTGNVTSVEALV 482 Query: 566 RWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVS 625 RW+ G+++P KFI ++E+ GFI EL +++TA + + + ++ + +N+S Sbjct: 483 RWMHPRLGMLAPDKFIRLSEESGFIVELTDWVLRTACTQAKKWQEQNLGS--VRVAVNLS 540 Query: 626 PWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISID 685 P+ E +++ GL+ L +EITE+ + + +E+ +LR+ G+ IS+D Sbjct: 541 PYHFQRQDVKEAIFSVLDATGLEPALLEIEITESALMQNDEYTCALFRELRELGMTISVD 600 Query: 686 DFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAEGVE 743 DFGTG S+L + +++K+D F ++ IV I +A+ + ++AEGVE Sbjct: 601 DFGTGYSSLSYLHRFPINTLKIDRTFILNMMKSSEDQAIVTAIIAMAKSLNMQIVAEGVE 660 Query: 744 SEDVARELIKLGCVQAQGYLYQKPMPFSA 772 + D +L GC + QG+L +P+ + Sbjct: 661 TVDQLEKLKDQGCHEIQGFLVSRPVAAES 689 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 590 bits (1523), Expect = e-167, Method: Composition-based stats. Identities = 111/450 (24%), Positives = 208/450 (46%), Gaps = 29/450 (6%) Query: 348 SIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGI 398 + I E K +E E ++ L YD +G +++ N+++ A+ Sbjct: 682 ATVRDITERKKSESE----IVRLAFYDPLTGLPNRRLLMDRLQHALTSNLRNDKHGAILF 737 Query: 399 IKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC------REN 452 I L +++ G + ++ ++ QR+ + + D +++L +N Sbjct: 738 IDLDNFKSLNDTKGHAVGDLLLVEVAQRLKGCVREEDTVARLGGDEFVVLLDNLSHGHDN 797 Query: 453 VQTFTRKIA--MVNDFDSSFGYRNLRIH----KSAICEPLQGENAWSYAEKLKLAISSIR 506 T+++A ++ + S+ + H + ++ A+ + Sbjct: 798 AGAHTKRVAEKILQALNLSYMLQGYEYHSSPSIGVALFCADASSPDELLKRADSAMYQSK 857 Query: 507 DHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCR 566 + F D+ + + + HA+E +L L YQ V+ +GAE L R Sbjct: 858 AAGRNTVRFYDERTQALLLARAELEHALHHALEQQQLMLYYQVQVN-ADYQPVGAEVLLR 916 Query: 567 WVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSP 626 W G+ISP +FI +AE+ G I +GY +++ A + + ++ K D +L +NVS Sbjct: 917 WFHPVLGMISPAQFIPLAEESGMIIPIGYWVLEQACDQLKRWASD-VFKCDLVLAVNVSI 975 Query: 627 WQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDD 686 Q +E F ++ ++ ++G+ + L +EITE+++ E+ ++QL+K G+ S+DD Sbjct: 976 RQFHEADFAQKVQALVTDSGISPDRLKLEITESMLVHDVENIIATMQQLKKIGLNFSMDD 1035 Query: 687 FGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVES 744 FGTG S+L + D +K+D F DI IVR I +A+ ++ +IAEG+E+ Sbjct: 1036 FGTGYSSLSSIKRLPLDQLKIDQSFVRDIGHDEHDKAIVRTIIAMAQSMKLNIIAEGIET 1095 Query: 745 EDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 E R L GC QGYL+ KP+P S ++ Sbjct: 1096 EQQRRLLALKGCTNYQGYLFSKPVPLSDFE 1125 >UniRef50_B8HRI7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HRI7_CYAP4 Length = 744 Score = 590 bits (1523), Expect = e-167, Method: Composition-based stats. Identities = 110/464 (23%), Positives = 200/464 (43%), Gaps = 34/464 (7%) Query: 344 KEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES----------NNNQY 393 I I+E K E E L YD + + + + Sbjct: 257 DGIAITARDISERKQKEAE----LHRQAFYDPLTELPNRTYFMNRLTKVLERAGRRQDFH 312 Query: 394 LAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE-- 451 AV + L + V G ++ ++ + +R++ + + D + +L E Sbjct: 313 YAVFFLDLDRFKVVNDSLGHLLGDEFLKAIARRLSSCLREEDMVARLGGDEFAILLEELS 372 Query: 452 ---NVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICEPLQGEN----AWSYAEKLKLAISS 504 V ++ V + F + + +A G + + +A+ Sbjct: 373 NPDIVHRIAERLQRV--LSAPFTLKQHELFTTASIGIALGTSYYEQPEAILRDADIAMYQ 430 Query: 505 IRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEAL 564 + + I D A + + ++R A+E E LVYQPIV I T ++G EAL Sbjct: 431 AKTQGKARHIIFDQAMHTRAVKRWQLESDLRWAIERREFCLVYQPIVSIQTERLIGFEAL 490 Query: 565 CRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL----KDDFLL 620 RW +RG ISP +FI++AE+ G I LG+ ++ + R + + +L + + Sbjct: 491 VRWHHPQRGWISPAEFISVAEETGLIIPLGHWVLWEGCRQLRQWQSQFNLSPTAEPPLTV 550 Query: 621 HINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGV 680 +N+S Q +P ++++ G++ L +E+TE+++ + QL++ G+ Sbjct: 551 SVNLSSKQFCQPDLIHYIQQVLQQTGMEGTCLKLELTESILMENLSTATSLLVQLKELGI 610 Query: 681 RISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVI 738 ++++DDFGTG S+L + D +K+D F I +IVR I LAR + V+ Sbjct: 611 QLALDDFGTGYSSLSYLHRFPLDVLKIDRSFINGIEAETENLEIVRTILSLARSLNLQVV 670 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE 782 AEGVE++ L L C AQGYL +P+ +K+ + ++E Sbjct: 671 AEGVETQAQLDHLQALQCGYAQGYLISRPLTP---EKTEQFLQE 711 >UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74BV5_GEOSL Length = 660 Score = 590 bits (1522), Expect = e-167, Method: Composition-based stats. Identities = 102/476 (21%), Positives = 186/476 (39%), Gaps = 39/476 (8%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKN---------MA 384 E L +G ++ + I E AE ++ L +D + Sbjct: 188 ELLSADDGRTSRLVGTVHDITERTLAE----ERIRYLAHHDTLTALPNRFQFEERMEQAL 243 Query: 385 IIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCD-------- 436 N +AV + L + V G ++++++ R+ + + Sbjct: 244 AFAQRNGFMMAVLFLDLDHFKKVNDTLGHHAGDRLLQEAAGRLMKCLRRSDTLTHASRED 303 Query: 437 ----IVTFNADLYLLLC-----RENVQTFTRKIAMVNDFDSSFGYRNLRI--HKSAICEP 485 I D + +L ++ +++I G + + P Sbjct: 304 ASPFISRMGGDEFTILLTDLAHPQDAARVSQRIITALSKRYVIGGHEVFVGASIGISLFP 363 Query: 486 LQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFL 545 GE+ A+ ++ + + + + E + + N+R A++ E L Sbjct: 364 SDGEDCDQLLRNADTAMYHAKELGRNTYQYYSGSMNAMALERLTLENNLRWALKRNEFRL 423 Query: 546 VYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEF 605 YQP +D + ++G EAL W ++ P FI +AE+ G I +G ++ A + Sbjct: 424 CYQPQLDAASGRVVGMEALLSWHRPGCDVVPPDDFIPLAEETGLIASIGEWVLWNACAQA 483 Query: 606 RHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERIN 665 + + +N+S Q E +++ GL + L +EITE V Sbjct: 484 VTWLHEGL--PPVRVAVNLSSLQFRSRRLAELVRKVLRATGLPPSHLELEITEGVFMSNE 541 Query: 666 EHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IV 723 E + I L+K GVR S+DDFGTG S+L R D++K+D F DI + Sbjct: 542 EDAAVVIRDLKKMGVRFSVDDFGTGYSSLSRLSRFPLDALKIDRSFVRDISADPAAAGLT 601 Query: 724 RIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM---PFSAWDKS 776 I +AR + VIAEGVE+ + L GC + QG+L+ +P+ +A+ ++ Sbjct: 602 AAIIAMARNLGLNVIAEGVETHEQFAFLRANGCAEVQGFLFSQPLNPDAAAAFLRA 657 >UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BR92_9GAMM Length = 944 Score = 590 bits (1522), Expect = e-167, Method: Composition-based stats. Identities = 107/464 (23%), Positives = 202/464 (43%), Gaps = 29/464 (6%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------ 385 I+A+ G A+ I+ + E K E KL L +D + + Sbjct: 485 SIQAVTDSAGMARNYIASITDLTERKQVE----EKLRYLSDFDPLTNLPNRRLLGYRVDQ 540 Query: 386 ----IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFN 441 +Q A+ I L + + G ++I++K+ +RI E + + Sbjct: 541 TLSLSRRQPDQQFALLYIDLDHFKNINDSLGHRFGDEILQKVAKRITELVREGDTVSRLG 600 Query: 442 ADLYLLLCRE-----NVQTFTRKIAMVNDFDSSFGYRNLRI---HKSAICEPLQGENAWS 493 D +++L E +I +++ + + P G++ Sbjct: 601 GDEFMILMPELHKLEQAANLAERI--LHNIAQPLENDSHLMITPSVGIAVYPNDGDSFDK 658 Query: 494 YAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDI 553 A+ + + + F E + + ++R A+E E L YQP +++ Sbjct: 659 LLRNADAAVHFAKRQGRNNYQFYTAEMNQRASERLQVEISLRKAVENQEFELFYQPQLNL 718 Query: 554 NTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRAS 613 ++ G EAL RW G++ P +FI +AE+ G I ++G ++ A + ++ +++ Sbjct: 719 RDGSLAGVEALIRWRHPNEGLVPPNRFIPLAEETGLILQIGSWVLVEACRQGAEWAAKST 778 Query: 614 LKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIE 673 + F + +NVS Q P E + + +GL SL +EITE+ + + E + Sbjct: 779 --EPFTMSVNVSVRQFR-PELVEEVRSALLTSGLSPKSLVIEITESTLMQDEEKTLTLLH 835 Query: 674 QLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLAR 731 +L++ GV++S+DDFGTG S++ N D +K+D F D+ I I D+A Sbjct: 836 ELKELGVQLSLDDFGTGYSSMAYLKRFNLDQLKIDRAFISDLPQNPDDAAITSAIIDVAS 895 Query: 732 YNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 + + +AEG+E + A L +GC++ QGY Y+KP+P + + Sbjct: 896 HFGLVTVAEGIEKPEQAEFLASVGCIEGQGYYYEKPIPANDLTE 939 >UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionella ferruginea ES-2 RepID=C5V4D4_9PROT Length = 925 Score = 590 bits (1522), Expect = e-167, Method: Composition-based stats. Identities = 106/448 (23%), Positives = 189/448 (42%), Gaps = 27/448 (6%) Query: 345 EIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLA 395 ++ I E K S ++ L +DQ +G + + + LA Sbjct: 477 AFQTLFRDITEQKQT----SAQIEHLAYHDQLTGLPNRRLLKDRLSQAVSSVVRRDAKLA 532 Query: 396 VGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC-----R 450 + + L + V G + +++ + +R+ + D ++LL Sbjct: 533 LMYLDLDHFKDVNDSLGHGAGDVLLQIVAERLQGCVRADDTLARMGGDEFVLLLNGVNGA 592 Query: 451 ENVQTFTRKIAMVNDFDSSFGYRNLRI--HKSAICEPLQGENAWSYAEKLKLAISSIRDH 508 ++V + KI G LRI P G +A + +A+ + Sbjct: 593 DDVASIAGKIIHELSQPMRIGNDELRITPSLGISMCPQDGRDADDLLKYADVALYQAKQQ 652 Query: 509 MFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWV 568 + + F A ++ E + + R +RHA+E E L YQP VD+ I+G EAL RW Sbjct: 653 GRATYRFYTQALHDQSVERVQLERLLRHALERNEFELYYQPQVDLCDGRIIGCEALIRWN 712 Query: 569 SAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQ 628 G +SP +FI IAE G I ++G ++K A + + + + D + NVS Q Sbjct: 713 HPGMGQVSPARFIPIAEQSGLIIDIGNWVMKQACHQAKRWHDQG---WDIKVSFNVSARQ 769 Query: 629 L-NEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDF 687 + + E+G+ + VE+TE+++ + + ++R G+++++DDF Sbjct: 770 FMRSGELMQSLRDALAESGVDPTRMEVELTESLLL-DPQGMGEILHEIRALGIQLALDDF 828 Query: 688 GTGLSNLKRFYEINPDSIKVDSQFTG--DIFGTAGKIVRIIFDLARYNRIPVIAEGVESE 745 GTG S+L +K+D F D ++V+ I +A R+ +IAEG+E+ Sbjct: 829 GTGYSSLSYLRRFPISILKIDRSFVSAADNNADDAEMVKTIIGMAHNLRMSLIAEGIETN 888 Query: 746 DVARELIKLGCVQAQGYLYQKPMPFSAW 773 L GC QGY Y P+P + + Sbjct: 889 AQRDMLETQGCEVGQGYHYSCPVPATEF 916 >UniRef50_C4XGB8 Putative response regulator receiver protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XGB8_DESMR Length = 801 Score = 590 bits (1522), Expect = e-167, Method: Composition-based stats. Identities = 112/449 (24%), Positives = 196/449 (43%), Gaps = 22/449 (4%) Query: 348 SIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES----------NNNQYLAVG 397 I I + K E ++L + +D +G ++ +N AV Sbjct: 355 GIVTDITDRKQLE----SQLAHMAFHDPLTGLPNRSLCLDRIRQALERSKRRDNYQYAVI 410 Query: 398 IIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE-----N 452 + L + V G ++++ + +R+ + + D ++++ E Sbjct: 411 FLDLDRFKIVNDSLGHHVGDRLLESVARRLRDCVRSLDTVARLGGDEFVVVLEETGSYRE 470 Query: 453 VQTFTRKI--AMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMF 510 V ++I AM F S ++ + P E +A+ +D Sbjct: 471 VVRIIKRIRDAMSEVFPLSGHDVHVSASMGIVVSPAIYEKPEELLRNANIALHRAKDEGR 530 Query: 511 SEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSA 570 + F + L + + + ++R A++ GE +L YQPI+ + R + G EAL RW Sbjct: 531 NRFKVFNTRMLEDAIRLMDLESDLRAALKRGEFYLDYQPILALRDRRVTGFEALVRWRRP 590 Query: 571 ERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLN 630 +GI P +FI + ED G I LG ++ A + R + +N+S QL+ Sbjct: 591 GKGIAPPGEFIPVCEDTGLIVPLGLWVLTEACRTMASWQARFPETAGMSMSVNLSAKQLS 650 Query: 631 EPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTG 690 +P E I+++ G+ +L +EITETVI E L +++L+ GVR+S+DDFGTG Sbjct: 651 QPSLVEDVERILRDTGMDPRALKLEITETVIMDNPEVSILRLKRLKALGVRLSVDDFGTG 710 Query: 691 LSNLKRFYEINPDSIKVDSQFTGDIFGTAG-KIVRIIFDLARYNRIPVIAEGVESEDVAR 749 S+L D++KVD F D+ + KIV + LA + V+AEGVE E + Sbjct: 711 YSSLSYLQRFPIDTLKVDRAFVSDLDTSENRKIVGAVVALAHSLGLDVVAEGVELETQSD 770 Query: 750 ELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 L C QG+L+ +P+ ++ + Sbjct: 771 VLTGFACEAGQGFLFSRPVCKEDVERMLR 799 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 590 bits (1522), Expect = e-167, Method: Composition-based stats. Identities = 108/460 (23%), Positives = 191/460 (41%), Gaps = 29/460 (6%) Query: 337 KIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE--------- 387 + G + I + I + K+ R ++ L YD + + Sbjct: 471 RDDLGTVRRAIEVVTDITDKKN----REQEIHRLAFYDPLTRLPNRRLFFDRLEQAFSAS 526 Query: 388 SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLL 447 + + Q+ AV + L + + G D + ++ +R+ E I D +++ Sbjct: 527 ARSGQHGAVLFLDLDNFKTLNDTRGHDVGDLLLTMAAERLQEAVRANDTISRQGGDEFMV 586 Query: 448 LC----RENVQTFTRKIAMVND----FDSSFGYRNLRIHKSAICEPL----QGENAWSYA 495 L E ++ + D F H A Sbjct: 587 LLNNLSPERHAAISQAGRVAEKIRAALDQPFDLDGYEHHIGVSIGLSLFLGHDTPADELF 646 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 ++ A+ + ++ F D E+E+ + ++R A+ G+ L YQP N Sbjct: 647 KRADAAMYQAKHAGRNQVRFFDPEMQAELEQASALVVDLRQAIWQGQFQLHYQPQ-TAND 705 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 I+GAEAL RW ERG +SP++FI +AE+ I +G +++ A G+ ++ Sbjct: 706 GRIIGAEALLRWRHPERGPVSPMQFIPLAEESNLILAIGRWVLEEACGQLAAWADL-PAA 764 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 + L +NVS Q +P F I+ G L +E+TE+++ +++L Sbjct: 765 GNCKLAVNVSARQFRQPEFVAEIRRILAATGADPKLLKLELTESIVMTELADTVSKMQEL 824 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYN 733 R G+ S+DDFGTG S+L + + + +K+D F D+ IV I + R Sbjct: 825 RDLGIGFSMDDFGTGYSSLAQLKRLPLEQLKIDRAFVRDLGSDPHDDAIVETIIAMGRTL 884 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 I VIAEGVE+++ L + GC QGYL+ +P+P + + Sbjct: 885 DIQVIAEGVETKEQLATLARYGCDAYQGYLFSRPVPAAQF 924 >UniRef50_D2L6G6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L6G6_9DELT Length = 814 Score = 590 bits (1521), Expect = e-167, Method: Composition-based stats. Identities = 112/453 (24%), Positives = 197/453 (43%), Gaps = 22/453 (4%) Query: 348 SIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES----------NNNQYLAVG 397 + + I + K E N+L + +D +G ++ N AV Sbjct: 358 GLVSDITDRKHLE----NQLAHMAFHDPLTGLPNRSLCLDRIRQAIERSKRRENYQYAVI 413 Query: 398 IIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE---NVQ 454 + L + + G ++++ + +R+ + + D +++L E N + Sbjct: 414 FLDLDRFKVINDSLGHHMGDRLLEGVSRRLRDCVRGLDTVARLGGDEFVVLLEETGSNRE 473 Query: 455 TFTRKIAMVNDFDSSFGYRNLRIHK----SAICEPLQGENAWSYAEKLKLAISSIRDHMF 510 + F + IH + P + +A+ + Sbjct: 474 IIRIVKRIRTAISDIFVLCDHDIHVTCSMGIVISPALYDKPEELLRNANIALHRAKGEGR 533 Query: 511 SEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSA 570 + F + L + + + ++R A++ GE FL YQPI+ + R + G EAL RW Sbjct: 534 NRFKVFNTRMLEDAIRLMDLENDLRLALKRGEFFLDYQPILALRDRRLTGFEALVRWRRP 593 Query: 571 ERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLN 630 +G+ SP++FI +AED G I LG ++ A + +R + + +N+S QL Sbjct: 594 GKGVASPMEFIPVAEDTGLIVPLGLWVLGEACQTMAAWQKRFPGAEHLSMSVNLSAKQLA 653 Query: 631 EPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTG 690 +P E I++ GL +L +EITE+VI E L +++L++ GVR+S+DDFGTG Sbjct: 654 QPTMVEEVERILRATGLDPRTLKLEITESVIMDNPEVSILRLKRLKELGVRLSVDDFGTG 713 Query: 691 LSNLKRFYEINPDSIKVDSQFTGDIFGTAG-KIVRIIFDLARYNRIPVIAEGVESEDVAR 749 S+L D++KVD F DI + KIV + LA + V+AEGVE E + Sbjct: 714 YSSLSYLQRFPIDTLKVDRAFVSDIEASENRKIVGAVVALAHSLGLDVVAEGVELETQSD 773 Query: 750 ELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE 782 L C QG+L+ +P+ ++ +E Sbjct: 774 VLEGFNCEAGQGFLFSRPVCGEDVERMLGTTRE 806 >UniRef50_A0YYE1 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensors n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YYE1_9CYAN Length = 1090 Score = 590 bits (1521), Expect = e-167, Method: Composition-based stats. Identities = 101/469 (21%), Positives = 199/469 (42%), Gaps = 26/469 (5%) Query: 335 ALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII-------- 386 L D + ++ I I + K AE ++L YD + + Sbjct: 618 PLLNHYPDTEYLLCIGEDITKRKQAE----DQLRHHAFYDTLTNLPNRALFLNRLAHSIK 673 Query: 387 --ESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 + + + AV + L + V G ++++ + +R+ + D Sbjct: 674 QVQQTSGELFAVLFLDLDNFKRVNDSLGHQIGDQLLIAIARRLEGCLRSRDTLARLGGDE 733 Query: 445 YLLLCRENVQTFTRKIAMVNDFDS----SFGYRNLRIHKSAICE-----PLQGENAWSYA 495 + +L E + T I + F + + ++ Sbjct: 734 FTILL-EQINNITDAIKVARHLHQQLMLPFNLSGNEVFTNVSIGIALSCSRHEQHPEELL 792 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 + A+ ++ + D + E + + +R A+E+ E + YQPIV I T Sbjct: 793 QNADSAMYRAKEMGKGAYAVFDTRMHRQAVERLQLESQLRRALELNEFQVYYQPIVSITT 852 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 ++G EAL RW++ +G ISP FI +AE+IG I+++G ++ A + + + ++ L Sbjct: 853 GEVIGFEALIRWLNPYKGFISPALFIPVAEEIGLISKIGQWVLYQACEQLQVWRKQFPLF 912 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 + + +N+S QL EP E+ ++ GL ++ L +EITE+++ + + Q+ Sbjct: 913 KNLTVSVNLSSQQLREPDLLEQIDQVLATTGLPSHCLKLEITESLLIENYDQALKILRQI 972 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYN 733 + + +++S+DDFGTG S+L + +++K+D F + I++ I LA Sbjct: 973 QDRNIQLSLDDFGTGYSSLSYLHRFPINTLKIDRSFVKRLKQNHENTAIIKAILRLANAL 1032 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE 782 + IAEG+E+ +L LGC QG+L+ K + L++ Sbjct: 1033 AMNTIAEGIETVFQLEKLKGLGCEYGQGHLFSKALDAQDITHLLSLIQR 1081 >UniRef50_B2UGH6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=30 Tax=Burkholderiaceae RepID=B2UGH6_RALPJ Length = 917 Score = 590 bits (1521), Expect = e-167, Method: Composition-based stats. Identities = 119/460 (25%), Positives = 205/460 (44%), Gaps = 28/460 (6%) Query: 336 LKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNM------------ 383 ++ + ++ N I + A+ +L L D +G Sbjct: 454 VRPGDNTPSAVLISFNDIGPARAAQ----QQLTFLAQRDALTGLYNRAYFSQRMQAVMEQ 509 Query: 384 AIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 A ++N +AV + L G + V G + + ++R + QR++ Q + D Sbjct: 510 AASQANEGHQVAVLFLDLDGFKKVNDTAGHEAGDHLLRIVAQRLSACVRQSDTLARLGGD 569 Query: 444 LYLLLCRE-----NVQTFTRKI--AMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAE 496 +++L + ++I ++ F +S L P G +A + Sbjct: 570 EFVVLLDNVRSLGEAERLAKRIVHSIAQPFSTSGTEYYLGASIGIALYPEHGNDAATLLR 629 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 A+ + + + ++ + + ++R A+ GEL L +QPIVD + Sbjct: 630 CADAAMYNAKQNGRNQHRVYTARLSQRAQRRFQLEYHLRRALTAGELSLRFQPIVDATSM 689 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 I+GAE L RW S E G +SP +FI +AED G I ++G ++ A + H+ RA+ Sbjct: 690 DIVGAEVLLRWHSTELGEVSPAEFIPVAEDAGLIGDIGEWVLAQACRQAAHW--RATCMP 747 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 +F + +N+SP Q E + + E GL A++L +EITE ++ R ++ L Sbjct: 748 EFFVAVNLSPRQFGE-GLVPTISRCLTEAGLPASALEMEITEGLLMRDTAAVMPMLDALT 806 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIV--RIIFDLARYNR 734 G+RISIDDFGTG S+L D++KVD F I +V R + +A Sbjct: 807 ALGIRISIDDFGTGYSSLSYLQRFPIDNLKVDRSFVSGIPRHRDSVVISRAVVAMAASLD 866 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 + V AEGVE+ + A L GC + QG+L+ PM +A++ Sbjct: 867 MTVTAEGVETLEQAEFLQAAGCDKLQGFLFGPPMTAAAYE 906 >UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQL8_BACS4 Length = 1016 Score = 589 bits (1520), Expect = e-166, Method: Composition-based stats. Identities = 115/467 (24%), Positives = 206/467 (44%), Gaps = 34/467 (7%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII------- 386 ++++ G A II +I+E K E +++ L +D +G + Sbjct: 549 DSIRDENGQAIRIIGSITNISEKKQQE----KQIMHLAFHDGLTGLPNRRLLRSRLELAM 604 Query: 387 --ESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCD-------- 436 N L + +I L + + G +++++K+ + Sbjct: 605 TDADRYNYKLGLLLIDLDRFKVINDTLGHQAGDELIQKVADVLELTMRSPDTHSRAKQEH 664 Query: 437 --IVTFNADLYLLLCR---ENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAIC----EPLQ 487 + D +++L + ++ F F +N + SA P Sbjct: 665 TTVARLGGDEFIILLTHITDVSDLQASANLIIEKFKEPFFIQNQDVFTSASIGISVYPDH 724 Query: 488 GENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVY 547 G + S +A+ +++ ++ E + +R A+E E L Y Sbjct: 725 GRDYDSLTGNADIAMYRAKENGKNQMEMYSSEINTLTMERFQMENQLRKALEREEFVLHY 784 Query: 548 QPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRH 607 QP + +LG EAL RW S++RGI+SP++FI +AE+ G I +GY ++K A + + Sbjct: 785 QPQFHLENNEVLGIEALLRWNSSDRGIVSPMEFIPLAEETGLIIPIGYWVLKEACRQNKR 844 Query: 608 FSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEH 667 + + ++ +N+S QL E F + +I+++ L LC+EITE+ + + Sbjct: 845 WMDQG--HRPKIVSVNISARQLQEKDFVQAVKSILEDTQLPTQYLCLEITESTAIKNIDI 902 Query: 668 FYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRI 725 +++L + G++I+IDDFGTG S+L ++ +IK+D F D+ G IVR Sbjct: 903 SMNMLKELGELGIKIAIDDFGTGYSSLAMLKQLPISNIKIDKSFIRDMDVDKDDGAIVRA 962 Query: 726 IFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 I +A + V AEGVE+ED L++ C QGYLY KP+P Sbjct: 963 IIAMAHSLELTVTAEGVETEDQKNILLQEKCNYLQGYLYSKPLPAEE 1009 >UniRef50_A1ALB3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Desulfuromonadales RepID=A1ALB3_PELPD Length = 705 Score = 589 bits (1520), Expect = e-166, Method: Composition-based stats. Identities = 121/528 (22%), Positives = 223/528 (42%), Gaps = 25/528 (4%) Query: 264 NNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTL 323 ++ L+ I+ + PG + + ++ L + L + + + + Sbjct: 175 SDELYRIFGFTPGEPKRISKEWIYSLIHPADLPAFKQQLLTSVKTLQSFNMIYHTTSRSG 234 Query: 324 AFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNM 383 L + E + +G A I I AE E + LI+YD +G Sbjct: 235 GELVVNIQG-EVERGEDGRAWLISGTVLDITARIKAESE----IHHLINYDTLTGLPNRS 289 Query: 384 AIIE---------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQC 434 + + + + + V + L + V G +K+++++ +R+A + Sbjct: 290 LLHDRLRQAIAQAAQDRHMVWVLCLDLDRFKGVNDTLGHRSGDKLLQEVARRLAACVRES 349 Query: 435 CDIVTFNADLYLLLC-----RENVQTFTRKIAMVNDFDSSFGYRNL--RIHKSAICEPLQ 487 + D ++++ + +KI + L P+ Sbjct: 350 DTLARLGGDEFVVVLDGVVSEKGASIVAKKILTLIAEPIPIDDHELYTTASIGIAAYPMD 409 Query: 488 GENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVY 547 GE+ + + LA+ ++ + F F ++ E + + ++R A+E E FLVY Sbjct: 410 GEDGHTLLKHADLAMYKAKELDRNNFHFFSHDMNIKVMERMMLENSMRKALERDEFFLVY 469 Query: 548 QPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRH 607 QP VD + I G EAL RW + G+++P +FI +AE+ GFI LG ++ TA + R Sbjct: 470 QPQVDARSGRITGVEALLRWNHPDMGLLTPDRFIYLAEETGFIVPLGEWVLMTACRQNRA 529 Query: 608 FSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEH 667 + + + +N+S Q + E + I+ E GL+ L +EITE+ I R + Sbjct: 530 WQKLGF--PPLRVAVNLSGKQFGQHRLDEMISAILLETGLEPEWLELEITESAIMRNADQ 587 Query: 668 FYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRI 725 + L+++G+ ++IDDFGTG S+L +K+D F DI I I Sbjct: 588 NIAILRSLKEKGISLAIDDFGTGYSSLSYLKHFPITRLKIDKTFVQDITTNPDDAAIAEI 647 Query: 726 IFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 I +A+ ++ VIAEGVE+ L C + QGYL+ +P+ + Sbjct: 648 IIAMAQTLKLNVIAEGVETRAQMEFLSTHTCFEMQGYLFSRPLTTDKF 695 >UniRef50_Q74EC6 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74EC6_GEOSL Length = 799 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 115/464 (24%), Positives = 198/464 (42%), Gaps = 40/464 (8%) Query: 337 KIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE--------- 387 +I +++I + E + +E + L +D +G + E Sbjct: 318 RIVANGTGTVLAIVRDVTERRQSE----EMIRYLAHHDSLTGLPNRIFFGEMLELVLSRA 373 Query: 388 SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIV--------- 438 + + +A+ + L + + G + ++R+ QR+ + Sbjct: 374 RRDGKQVAILFVDLDDFKLINDTLGHAAGDHLLREAAQRLKGCVRSSDYVASGAESGLCG 433 Query: 439 ---TFNADLYLLLC-----RENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAIC----EPL 486 F D ++L ++V T++I +++F F I S P Sbjct: 434 NIARFGGDEFILSLGNLDSVDDVVAVTQRI--ISEFSREFRIDGHEIFVSVSIGISMYPD 491 Query: 487 QGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLV 546 E+ S +A+ + ++ F F ++ + I ++R A+E GE+F+ Sbjct: 492 DAEDTGSLVRNADMAMFAAKEEGGPSFRFFTRGMNEAAQQRLSIELSLRKALERGEIFVH 551 Query: 547 YQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFR 606 YQP VD++ I G EAL RW E G+I P FI +AE G I +G +++ A + R Sbjct: 552 YQPKVDLSCGEITGFEALARWHHPELGLIPPDTFIPLAEKNGLIVRIGEWVLRAACAQAR 611 Query: 607 HFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINE 666 + D + IN+S Q + ++ E L + L EITE ++ E Sbjct: 612 TWIDEGF--SDLCMAINLSSHQFTSGNLTSMVKEVLDETELPPSCLEFEITEGILMERTE 669 Query: 667 HFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVR 724 + +LR GVRISIDDFGTG S+L +++K+D F +I I++ Sbjct: 670 KTMRILSELRDMGVRISIDDFGTGYSSLGYLKRFPVNTVKIDRSFVREIDSPHEDAAIIK 729 Query: 725 IIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 I +AR + V+AEGVES L+ GC +AQG+L+ KP+ Sbjct: 730 AIIAVARNLNLQVVAEGVESHRQTEFLLAHGCNEAQGFLFGKPV 773 >UniRef50_B1XX17 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XX17_LEPCP Length = 790 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 106/454 (23%), Positives = 204/454 (44%), Gaps = 20/454 (4%) Query: 340 EGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES-----NNNQYL 394 +G ++S +E+K + E L L D +G +++ + Sbjct: 317 DGRVTRLMSTLQDTSELKQTQRE----LQKLAFNDPLTGLGNRAWFMQALAGMLRQGERS 372 Query: 395 AVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQ 454 A+ ++ L +A+ G + ++ QR+ + D + ++ Sbjct: 373 ALLMLDLDHFKAINDTLGHHAGDLLLGMAAQRLQRVLGDTASLARLGGDEFAIILPAIAS 432 Query: 455 TFTRKIA---MVNDFDSSFGYRNLRIHKSAICE----PLQGENAWSYAEKLKLAISSIRD 507 + +++ F + ++ SA P ++ + +A+ + Sbjct: 433 SAAAAQQAQALIDTLTRPFSVAGVEVYVSASIGIAVSPQDADDTEALLRCADVAMFDAKG 492 Query: 508 HMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRW 567 + + F + E + + ++R A+E GEL L YQP VD+ T ++GAEAL RW Sbjct: 493 LGRAGYQFYAAQQSERARERVLLEGDLRRAIERGELELHYQPKVDMRTDRVVGAEALLRW 552 Query: 568 VSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFS--QRASLKDDFLLHINVS 625 AERG++ P +FI +AED G I +G +++TA H++ +RA ++ + +N+S Sbjct: 553 HHAERGMVPPDRFIPVAEDTGLIIPIGEWVLRTACTAATHWNRTRRARGQEALKIAVNLS 612 Query: 626 PWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISID 685 P Q PHF +M E G + + +EITE+++ + +L + G ++ID Sbjct: 613 PRQFWSPHFVAMVRAVMHETGCRPEWIELEITESLLIDTRGQVSEILAELSRLGFTLAID 672 Query: 686 DFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVE 743 DFGTG S L ++K+D F ++ +VR I + ++ ++AEGVE Sbjct: 673 DFGTGYSALGYLTRFPISTLKIDRSFVNEVATHPARASLVRAIVAMGHSLQLELVAEGVE 732 Query: 744 SEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 + + + L ++GC AQG+LY +P + ++ + Sbjct: 733 THEQVQVLREMGCQLAQGWLYGRPQARALFEAAH 766 >UniRef50_A1KBA9 Conserved hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KBA9_AZOSB Length = 726 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 111/445 (24%), Positives = 197/445 (44%), Gaps = 23/445 (5%) Query: 345 EIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKN--------MAIIESNNNQ-YLA 395 + + I+E K AE + +DQ + +AI ++ LA Sbjct: 273 GLYGVARDISERKRAE----EIISFQAYHDQLTRLPNRVLFKDRLELAIAQAQRRTGALA 328 Query: 396 VGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE---- 451 V I + + V FG E + ++R + R+A + + D + +L + Sbjct: 329 VMFIDVDRFKLVNDTFGHAEGDMLLRGIAARLAGTLRRGDTLARLGGDEFTVLLPDINGP 388 Query: 452 -NVQTFTRKI--AMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKLAISSIRDH 508 + + RKI ++ F S G P G+ A +A+ ++ Sbjct: 389 QDAEVIARKILDSLSAPFPLSHGDFRATASIGIALFPRDGDGAEDLTRHADIAMYQVKRS 448 Query: 509 MFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWV 568 + F F D A + E I + ++R A+E E L YQP + + ++G EAL RW Sbjct: 449 GKNGFRFFDIALNSHYRERIVLENDLRTALERREFELHYQPQISLTQHRVVGMEALLRWN 508 Query: 569 SAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQ 628 G++SP FI +AE++G I ++ +++ A G+ + + +D + +N+SP Sbjct: 509 HPNLGLVSPATFIPVAEEMGLIGDISRWVLEEACGQLARWREAG--HNDLRMSLNLSPHD 566 Query: 629 LNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFG 688 + T ++ + L + L +EITE+++ + + LR+ G+ ++IDDFG Sbjct: 567 FDSQDVVTMVTECVERHRLPPSQLELEITESMMMQDAAGVAAKVRGLREAGLSVAIDDFG 626 Query: 689 TGLSNLKRFYEINPDSIKVDSQFTGDIFG-TAGKIVRIIFDLARYNRIPVIAEGVESEDV 747 TG S L + ++K+D F ++ G I+ I +AR + +IAEGVE + Sbjct: 627 TGYSALAYLQKFPVSTLKIDRSFVRELEGPNTNPIISAITGIARGFGLQLIAEGVERSEQ 686 Query: 748 ARELIKLGCVQAQGYLYQKPMPFSA 772 A L LGC QG+LY +P P + Sbjct: 687 AETLRTLGCDVMQGFLYARPAPAAE 711 >UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JW23_DESAC Length = 951 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 97/463 (20%), Positives = 198/463 (42%), Gaps = 24/463 (5%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNK---LLSLISYDQESGFIKNMAI----- 385 L G + + I + + AE K L + ++D +G Sbjct: 490 TPLIGSAGQHEGAVLIFKDLTRQQQAEERLEEKKQLLDHMSNHDSLTGLPNRRLFQDRLY 549 Query: 386 ----IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFN 441 ++ ++V I L + + G + +K++ + +R+ + + Sbjct: 550 HAIERARRSSSEMSVLFIDLDRFKKINDSLGHELGDKLLISVARRMQSHLRRSDTLARLG 609 Query: 442 ADLYLLLCRENVQTFTRKIA---MVNDFDSSFGYRNLRIHKSAIC----EPLQGENAWSY 494 D ++++ E+ + + ++N+ +F + R+ +A P E+ Sbjct: 610 GDEFVVILEESSHSHFAAVIARNLLNELSEAFDVESHRLFVTASIGISRYPYDAEDVVGL 669 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 A+ + + F F ++ + + +R A+ + + + YQP D+ Sbjct: 670 MSSADAAMYHAKSRGRNNFQFYAPEMNGRAQDFLEMETQLRDALALEQFEVYYQPQYDMR 729 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 + ++GAEAL RW ERG++ P FI +AE+ G I +G ++ + R + Sbjct: 730 DQTLVGAEALLRWNHPERGMVPPGDFIALAEETGAIVPIGEWVLMQVCRQNRQWMDEGLT 789 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 + +N+S Q + + +++++G+ A L +EITE+++ E + + Sbjct: 790 --PVRVAVNISIAQFRS-NLSQTLEQVLEQSGMPAELLELEITESMLMEDEEETITLLNE 846 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARY 732 L+++G+ ISIDDFGTG S+L ++ D +K+D F + I I L + Sbjct: 847 LKEKGLHISIDDFGTGYSSLSYLRKLPVDKLKIDRSFIAHVVHNQSDAAITGSIIALGQN 906 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 + ++AEGVE E+ L++ C AQG+LY +PM + + Sbjct: 907 MDLRILAEGVEHEEQRDFLLQHRCYIAQGFLYARPMTAEDFVR 949 >UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodoferax ferrireducens T118 RepID=Q21R50_RHOFD Length = 1052 Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 108/466 (23%), Positives = 197/466 (42%), Gaps = 30/466 (6%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE----- 387 I A+K G A ++ ++ K AE +++ SL YD +G +++ Sbjct: 587 ISAVKDPAGQATHYVATFTDLSTRKSAE----DQIKSLAFYDTLTGLPNRRLLLDRLKQA 642 Query: 388 ----SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + + + A+ I L + + +G D +++++++ QR++ + D Sbjct: 643 LASGARHRRQGALLYIDLDDFKTLNNTYGHDVGDQLLQEVAQRLSHYLRAGDTVARPGGD 702 Query: 444 LYLLLCR----------ENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICEPLQG---EN 490 +++L + KI + R S E Sbjct: 703 SFVVLLEALSTNSVEAATEAENTGEKIRLALSQPYQIADHAHRSTASIGVTLFDDRQQEG 762 Query: 491 AWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPI 550 ++ +LA+ + + F D + + ++R A+ + L YQ Sbjct: 763 IDEPLKRAELAMYQAKTAGRNTLRFFDPQMQTAVMAMAALEADLREAVRSNQFLLYYQAQ 822 Query: 551 VDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQ 610 V R + G EAL RW RG++ P +FI +AE G I LG +++TA + ++ Sbjct: 823 VSGE-RQVAGVEALVRWQHPVRGLVPPAEFIPLAEQTGLILPLGQWVLETACAQLAAWAS 881 Query: 611 RASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYL 670 + + + +NVS Q ++ F + +K G L +E+TE+++ E Sbjct: 882 Q-PERAHLTVAVNVSALQFHQADFVAQVLAALKRAGANPQRLKLELTESLLVHDAEDVIA 940 Query: 671 NIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFD 728 + L++QGV S+DDFGTG S+L + + +K+D F DI A I +++ Sbjct: 941 KMITLKEQGVGFSLDDFGTGYSSLSYLKRLPLNQLKIDQGFVRDILHDANDAAIAKMVVA 1000 Query: 729 LARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 LA + VIAEGVE+E L GC QG+LY + +P A++ Sbjct: 1001 LADTLGLSVIAEGVETEAQRDFLAAQGCHAYQGHLYSRALPIDAFE 1046 >UniRef50_C4KCC9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4KCC9_THASP Length = 748 Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 114/445 (25%), Positives = 187/445 (42%), Gaps = 23/445 (5%) Query: 345 EIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKN--------MAIIESNNNQ-YLA 395 + + I+E K AE + +DQ + +AI ++ LA Sbjct: 285 GLYGVARDISERKRAE----EIISFQAYHDQLTHLPNRVLFKDRLELAIAQAQRRTGALA 340 Query: 396 VGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR----- 450 V I + + V FG E + ++R + R++ + + D + +L Sbjct: 341 VMFIDIDRFKLVNDTFGHAEGDLLLRAIASRLSATLRRGDTLARLGGDEFTVLLPDINQP 400 Query: 451 ENVQTFTRKI--AMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKLAISSIRDH 508 E+ + RK+ A+ S G + P G A A+ ++ Sbjct: 401 EDAEVIARKVLDALATPVRLSQGEFRATVSVGIALFPRDGTTAEDLTRHADAAMYQVKRS 460 Query: 509 MFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWV 568 + F F D + I + ++R A+ GEL L YQP V + TR I+G EAL RW Sbjct: 461 GKNAFRFFDPELNTRHRDRIALENDLRGAVARGELDLHYQPQVSLATRGIVGLEALLRWN 520 Query: 569 SAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQ 628 G I P FI +AE++G I+E+ +++TA + + + IN+S Sbjct: 521 HPGLGAIPPATFIQVAEEVGLISEISNWVLETACAQLARWQAEGVGAP--RVSINLSACD 578 Query: 629 LNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFG 688 R + +G+ + L VEITE ++ + LR+ G+ ++IDDFG Sbjct: 579 FQRGDVVGRIRACLDRHGVAPSCLEVEITEGLMMDDTADIAAKVRALREAGISVAIDDFG 638 Query: 689 TGLSNLKRFYEINPDSIKVDSQFTGDIFGT-AGKIVRIIFDLARYNRIPVIAEGVESEDV 747 TG S L ++K+D F D+ G I+ I +AR + ++AEGVE+ + Sbjct: 639 TGYSALAYLQRFPVSTLKIDRSFVRDLEGPMTNPIISAITGIARGFDLDLVAEGVENLEQ 698 Query: 748 ARELIKLGCVQAQGYLYQKPMPFSA 772 A L LGC QGYL+ +P P Sbjct: 699 ADALRALGCEVMQGYLFARPAPAGE 723 >UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=23 Tax=Pseudomonas RepID=A4Y0E0_PSEMY Length = 766 Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 108/458 (23%), Positives = 196/458 (42%), Gaps = 24/458 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI------- 385 I + G +++ + I +K ++ E L L +D S + Sbjct: 295 IRVIHDEHGRISHYVAVFSDITALKRSQRE----LDYLAHHDPLSNLPNRLLFTERIAHA 350 Query: 386 IESNNNQYL--AVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 +E + ++ L AV +I L + + G + + +++ + +R+ + C + D Sbjct: 351 LERSKSEQLRGAVLLIDLDHFKHINESLGHNVGDLLLKSVGERLQQDLPGGCTLARLGGD 410 Query: 444 LYLLL---CRENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICE----PLQGENAWSYAE 496 + LL C + Q ++ ++ F ++ A P ++ Sbjct: 411 EFGLLSETCADAPQAAELAQNLLRCLEAPFRLDEHELYIGASIGISLFPDDADSVEQVLR 470 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 A+ + + F + + + +A ++RHA++ EL + YQP+ D+ Sbjct: 471 NADSALFKAKSSGREGYAFYVQELTDYARQRVELASSLRHALDNHELRVFYQPLHDLENG 530 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 +G EAL RW +RG+I P +FI IAED G I + +++ A G+ ++ S Sbjct: 531 NPVGMEALVRWQHPQRGLIPPAEFIPIAEDNGMIGPIDAWVLEQACGQMMRWNAEGSALR 590 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +NVS + + ++ E GL L +E+TE+ I + + +LR Sbjct: 591 --FVAVNVSSRLFSRGELDLKVAQVLAETGLSPQQLELEVTESAIMEDPDAALSLLTRLR 648 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNR 734 GVR++IDDFGTG S+L R + D +K+D F + I R + L Sbjct: 649 ALGVRLAIDDFGTGYSSLARLKRLPVDKLKLDQSFVRGLPDDIEDAAIARAVIALGHSLG 708 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 + V+AEG+ES L LGC QGY + +P P +A Sbjct: 709 LNVLAEGIESPAQVDFLRALGCDYGQGYHFGRPAPVTA 746 >UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax=cellular organisms RepID=Q607T2_METCA Length = 1346 Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 101/460 (21%), Positives = 194/460 (42%), Gaps = 23/460 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---- 388 I ++ G I + I+ +K+AE + L YD S ++E Sbjct: 876 IVTVRDETGAMVNYIGVAADISSLKEAE----EHIHHLAYYDPLSALPNRRYLMERAEYA 931 Query: 389 -----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + LAV + + + V G ++++ ++ +I E + + D Sbjct: 932 LALAERRKEELAVVFLDVDHFKDVNDSLGHQVGDELLVRVATQIKEFTRETDTVARLGGD 991 Query: 444 LYLLLCRENVQTFTRKIA--MVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEK 497 + LL + + ++A ++ F + P G + + Sbjct: 992 EFALLLPDLGRDAVSQVADKILAALRKPFEHSGQTFAVTGSIGISLYPHDGTDFETLLRN 1051 Query: 498 LKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 A+ + ++F F D +I + + +R A+ GEL +QP +D+ Sbjct: 1052 ADTAMYHAKQQGRNQFRFYDPGMNVDILARLTVLSELREAIPAGELRTFFQPEIDLANGT 1111 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 ++GAEAL RW RG++SP +FI +AE I + +++ + + + + Sbjct: 1112 LVGAEALVRWQHPTRGLLSPDQFIPVAESNDLIIAISDWVLEDTCRHLAQWKK--ADQAP 1169 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK 677 + +N++ +P R +++ G+ +SL +E+TE+ + + + +++L Sbjct: 1170 ITVGVNLAARHFRDPRLVPRVKSLLCRYGVPGSSLQLELTESTLLDADAQTMIVLQELIA 1229 Query: 678 QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRI 735 G +SIDDFGTG S+L + ++K+D F DI I + L + Sbjct: 1230 LGCSLSIDDFGTGYSSLSYLKNLPIATLKIDQSFVRDIAFDADDRTISGTVVALGHSLGL 1289 Query: 736 PVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 VIAEGVE+E+ R L++ GC QGYL+ +P+ + K Sbjct: 1290 KVIAEGVETEEQRRILLEQGCDFGQGYLFSRPLSSKEFIK 1329 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 106/466 (22%), Positives = 202/466 (43%), Gaps = 29/466 (6%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE---- 387 I ++ +G + + I E K + + ++D + + Sbjct: 577 SISVIRRADGSIYRHVGQFSDITEKKR----KDELIWEQANFDTLTNLPNRRLFADRFRQ 632 Query: 388 -----SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + + +Y A+ + L + + FG +K++ ++ +R+ + + Sbjct: 633 AISAGARSGRYGALLSLDLDQFKRLNDTFGHSMGDKLLIEVARRLTSCVREEDTVARMGG 692 Query: 443 DLYLLLC----RENVQTFTRKIAMVNDFDS----SFGYRNLRIHKSAICEPL----QGEN 490 D +L++ E + R + + + H S+ + ++ Sbjct: 693 DEFLVILNGLGSEQNEAAIRAELIAEKIRNELCRPYQLDKTEHHSSSSIGIVLFRGHSDD 752 Query: 491 AWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPI 550 + A+ + + F D + +E+ + +R A+E E L YQ Sbjct: 753 PERLLAHVDTAMYQSKAKGRNAICFFDSSMQEILEKRGQLETALRGALERKEFLLHYQLQ 812 Query: 551 VDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQ 610 +D ++ +GAEAL RW +A+ G +SP++FI +AE+ G I +G+ +++TA + + Sbjct: 813 MD-SSGRPIGAEALLRWNNAKLGSVSPVQFIPVAEESGLILPIGHWVLETACAQLARWQS 871 Query: 611 RASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYL 670 + + +NVS Q E F + +++++G++ L +E+TE+++ L Sbjct: 872 D-PRFNRLCIAVNVSAIQFREAAFVAKVRNVLQQSGIQPWLLKLELTESLVLDDINDSIL 930 Query: 671 NIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFD 728 +E L+ GV+ S+DDFGTG S+L + D +K+D F DI IV+ I Sbjct: 931 KMEALKNLGVKFSMDDFGTGYSSLSYLSRLPLDQLKIDQSFVRDITTDQHDAAIVQTIIS 990 Query: 729 LARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 +A + VIAEGVE+E+ L GC QGYLY KPMP + Sbjct: 991 MALSLGMEVIAEGVETEEQREFLDLRGCQAYQGYLYAKPMPIEELE 1036 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P75800 Uncharacterized protein yliE n=57 Tax=cellular o... 812 0.0 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 780 0.0 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 770 0.0 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 770 0.0 UniRef50_B0CC32 Diguanylate cyclase/phosphodiesterase, putative ... 768 0.0 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 768 0.0 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 758 0.0 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 754 0.0 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 754 0.0 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 753 0.0 UniRef50_B8HQZ5 Diguanylate cyclase/phosphodiesterase with extra... 751 0.0 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 748 0.0 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 746 0.0 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 744 0.0 UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/P... 744 0.0 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 743 0.0 UniRef50_B1HMB6 Sensory box/GGDEF family protein n=1 Tax=Lysinib... 743 0.0 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 742 0.0 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 741 0.0 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 739 0.0 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 739 0.0 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 738 0.0 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 738 0.0 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 737 0.0 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 737 0.0 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 736 0.0 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 735 0.0 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 734 0.0 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 734 0.0 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 734 0.0 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 734 0.0 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 733 0.0 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 732 0.0 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 732 0.0 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 731 0.0 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 731 0.0 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 731 0.0 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 731 0.0 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 731 0.0 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 730 0.0 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 730 0.0 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 730 0.0 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 730 0.0 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 729 0.0 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 729 0.0 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 729 0.0 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 729 0.0 UniRef50_A8FYM5 Signal transduction protein containing a membran... 729 0.0 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 728 0.0 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 727 0.0 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 726 0.0 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 725 0.0 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 724 0.0 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 724 0.0 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 724 0.0 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 724 0.0 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 723 0.0 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 723 0.0 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 721 0.0 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 721 0.0 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 721 0.0 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 721 0.0 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 721 0.0 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 720 0.0 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 720 0.0 UniRef50_A8UR98 Sensory box/GGDEF family protein n=1 Tax=Hydroge... 719 0.0 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 719 0.0 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 718 0.0 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 718 0.0 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 718 0.0 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 718 0.0 UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/P... 718 0.0 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 716 0.0 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 716 0.0 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 716 0.0 UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 715 0.0 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 715 0.0 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 715 0.0 UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/P... 714 0.0 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 714 0.0 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 713 0.0 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 713 0.0 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 713 0.0 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 712 0.0 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 712 0.0 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 711 0.0 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 710 0.0 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 709 0.0 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 709 0.0 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 709 0.0 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 709 0.0 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 709 0.0 UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 708 0.0 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 708 0.0 UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/P... 707 0.0 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 707 0.0 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 707 0.0 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 706 0.0 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 706 0.0 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 706 0.0 UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/P... 705 0.0 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 705 0.0 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 705 0.0 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 705 0.0 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 705 0.0 UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 705 0.0 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 705 0.0 UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/P... 704 0.0 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 703 0.0 UniRef50_C1DB08 Predicted signal transduction protein containing... 703 0.0 UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 703 0.0 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 703 0.0 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 703 0.0 UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/P... 702 0.0 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 702 0.0 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 702 0.0 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 702 0.0 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 702 0.0 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 702 0.0 UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/P... 702 0.0 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 702 0.0 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 702 0.0 UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/P... 701 0.0 UniRef50_A0L8P4 Response regulator receiver modulated diguanylat... 701 0.0 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 701 0.0 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 701 0.0 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 701 0.0 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 701 0.0 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 700 0.0 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 700 0.0 UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/P... 700 0.0 UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curviba... 699 0.0 UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 699 0.0 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 698 0.0 UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 698 0.0 UniRef50_Q2S7Q5 Predicted signal transduction protein containing... 697 0.0 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 697 0.0 UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter... 697 0.0 UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling p... 697 0.0 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 697 0.0 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 696 0.0 UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 ... 696 0.0 UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 696 0.0 UniRef50_A1ALB3 Response regulator receiver modulated diguanylat... 696 0.0 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 696 0.0 UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/P... 696 0.0 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 695 0.0 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 695 0.0 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 695 0.0 UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA a... 694 0.0 UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 694 0.0 UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuni... 694 0.0 UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/P... 693 0.0 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 693 0.0 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 693 0.0 UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/P... 691 0.0 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 691 0.0 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 691 0.0 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 691 0.0 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 690 0.0 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 690 0.0 UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4... 690 0.0 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 689 0.0 UniRef50_B2UIB3 Diguanylate cyclase/phosphodiesterase with PAS/P... 689 0.0 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 689 0.0 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 689 0.0 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 689 0.0 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 689 0.0 UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=unc... 689 0.0 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 689 0.0 UniRef50_B9M6C9 Response regulator receiver modulated diguanylat... 689 0.0 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 689 0.0 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 688 0.0 UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/P... 688 0.0 UniRef50_Q2SF23 Predicted signal transduction protein containing... 688 0.0 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 687 0.0 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 687 0.0 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 687 0.0 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 687 0.0 UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/P... 687 0.0 UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Cauloba... 687 0.0 UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria... 686 0.0 UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 686 0.0 UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 686 0.0 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 686 0.0 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 686 0.0 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 686 0.0 UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/P... 686 0.0 UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 686 0.0 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 686 0.0 UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 686 0.0 UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 685 0.0 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 685 0.0 UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/P... 685 0.0 UniRef50_B7LP31 Putative uncharacterized protein yliE n=1 Tax=Es... 685 0.0 UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplast... 685 0.0 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 685 0.0 UniRef50_Q21XK7 Response regulator receiver modulated diguanylat... 684 0.0 UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/P... 684 0.0 UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 684 0.0 UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax... 684 0.0 UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellula... 684 0.0 UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Ba... 684 0.0 UniRef50_A1SZV0 Response regulator receiver modulated diguanylat... 684 0.0 UniRef50_C1DCZ4 Predicted signal transduction protein containing... 684 0.0 UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/P... 684 0.0 UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/P... 683 0.0 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 683 0.0 UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/P... 683 0.0 UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n... 682 0.0 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 682 0.0 UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/P... 681 0.0 UniRef50_C7RQ11 Response regulator receiver modulated diguanylat... 681 0.0 UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacter... 681 0.0 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 681 0.0 UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=ce... 680 0.0 UniRef50_C7RVM5 Response regulator receiver modulated diguanylat... 680 0.0 UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 680 0.0 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 680 0.0 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 679 0.0 UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuni... 679 0.0 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 678 0.0 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 678 0.0 UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/P... 678 0.0 UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 678 0.0 UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum... 678 0.0 UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH 677 0.0 UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax... 677 0.0 UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfuro... 677 0.0 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_B8GQW3 Signal transduction protein containing a membran... 677 0.0 UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 677 0.0 UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 677 0.0 UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 676 0.0 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 676 0.0 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 676 0.0 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 676 0.0 UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 676 0.0 UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/P... 675 0.0 UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio... 675 0.0 Sequences not found previously or not previously below threshold: >UniRef50_P75800 Uncharacterized protein yliE n=57 Tax=cellular organisms RepID=YLIE_ECOLI Length = 782 Score = 812 bits (2098), Expect = 0.0, Method: Composition-based stats. Identities = 773/785 (98%), Positives = 773/785 (98%), Gaps = 6/785 (0%) Query: 1 MLSLYEKIKIRLIILFLLAALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKD 60 MLSLYEKIKIRLIILFLLAALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKD Sbjct: 1 MLSLYEKIKIRLIILFLLAALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKD 60 Query: 61 IERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVV 120 IERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVV Sbjct: 61 IERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVV 120 Query: 121 YHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLH 180 YHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLH Sbjct: 121 YHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLH 180 Query: 181 INGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYN 240 INGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYN Sbjct: 181 INGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYN 240 Query: 241 SEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLV 300 SEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLV Sbjct: 241 SEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLV 300 Query: 301 VYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAE 360 VYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAE Sbjct: 301 VYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAE 360 Query: 361 IERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIV 420 IERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIV Sbjct: 361 IERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIV 420 Query: 421 RKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKS 480 RKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKS Sbjct: 421 RKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKS 480 Query: 481 AICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEI 540 AICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEI Sbjct: 481 AICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEI 540 Query: 541 GELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKT 600 GELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKT Sbjct: 541 GELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKT 600 Query: 601 AMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETV 660 AMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETV Sbjct: 601 AMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETV 660 Query: 661 IERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEI---NPDSIKVDSQFTGDIFG 717 IERINEHFYLNIEQLRKQGVRISIDDFGTG L NPDSIKVDSQFTGDIFG Sbjct: 661 IERINEHFYLNIEQLRKQGVRISIDDFGTG---LSNLKRFYEINPDSIKVDSQFTGDIFG 717 Query: 718 TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG Sbjct: 718 TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 Query: 778 KLVKE 782 KLVKE Sbjct: 778 KLVKE 782 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 780 bits (2015), Expect = 0.0, Method: Composition-based stats. Identities = 137/734 (18%), Positives = 257/734 (35%), Gaps = 55/734 (7%) Query: 74 LLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPL-VD 132 L + + V FL V V + + R N+K+ Q G + VD Sbjct: 175 ALSLSRVQMKGVWH------FLGIVRDVTESRETGERLRETNEKLDTLIQASPQGIVAVD 228 Query: 133 ESGRVIFADFNP-SKRPW---------SVASDDSNNSWNPAYNCFDRPGKKCISFTLHIN 182 G+V + W + + + GK+ L Sbjct: 229 CGGKVTLWNRAAVEIFGWSAEEVLGKPYPVAPAERAAEHRKLRELVLQGKRITDVELRRR 288 Query: 183 GKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSE 242 KD + V + D V+ + +N+ L+ E Sbjct: 289 RKDGSPIDVSLSAAPI--------CDGSGTPLGVITIISDISARKRNEQELV-LLKRAME 339 Query: 243 GNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVY 302 + N I D + + N FE Y +++ + + + Sbjct: 340 SSINGITITDATHPDNPIIY-VNPAFERITGYGVDEVIDKNPRFLR---GDDRDQAELKK 395 Query: 303 LMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIE 362 L+ R+ + + I ++ R+G I + N I E + E Sbjct: 396 LVQAFKEEREGCFVLRNYRKDGSPFWNELFIAPVRDRDGVVTNYIGVMNDITEHRRYE-- 453 Query: 363 RSNKLLSLISYDQESGFIKNMAIIES----------NNNQYLAVGIIKLCGLEAVEAVFG 412 +L+ ++D +G + + + V + L + V G Sbjct: 454 --EQLVYQATHDPLTGLPNRNLLQDRLGQALALEAFRRRNPICVMFLDLDNFKKVNDTLG 511 Query: 413 VDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR---ENVQTFTRKIAMVNDFDSS 469 + +++ + R+ + D Y+++ E T M+N F + Sbjct: 512 HTVGDMLLKAVANRLKNCLRGGDTVARLGGDEYIIVLPNVREVPDVITVAKKMINVFAAP 571 Query: 470 FGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIE 525 I P GE + + A+ ++ + + F + Sbjct: 572 LLLMGNEIYVTASIGIALFPTDGETVDALLKNADAAMYHAKEQGKNNYQFYSAEMNIRVF 631 Query: 526 ENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAE 585 E + + ++ A++ E L YQP VD+ I G EAL RW E G++SP KFI +AE Sbjct: 632 ERLSLETSLHRAVKNQEFLLHYQPRVDLRNGRICGVEALVRWNHPEMGLVSPAKFIPLAE 691 Query: 586 DIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKEN 645 + G I +G +++TA + + + + +N+S Q + + I+ E Sbjct: 692 ETGLIVPMGEWVLRTACAQNKAWQDAGL--PPLRMAVNLSARQFRQENLIAMVEEILMET 749 Query: 646 GLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSI 705 GL L +E+TE+++ + E + +L +G+ ++IDDFGTG S+L ++ Sbjct: 750 GLAPQWLELELTESLVMQEAEKSAAILRELTDRGIEVAIDDFGTGYSSLSYLKRFPIANL 809 Query: 706 KVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYL 763 K+D F D+ +V+ I +A + IAEGVE + L + C + QGY Sbjct: 810 KIDQAFIRDMTRDPDDATLVKTIITMAHGLGMKTIAEGVELAEQIDFLCRHQCEEMQGYY 869 Query: 764 YQKPMPFSAWDKSG 777 + +P+ + Sbjct: 870 FSRPITAEELGRLL 883 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 770 bits (1989), Expect = 0.0, Method: Composition-based stats. Identities = 131/653 (20%), Positives = 252/653 (38%), Gaps = 51/653 (7%) Query: 150 SVASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNWRYL-NEYLD 208 +SD + ++ K + + + L ++++++D + + + Sbjct: 308 YPSSDGLSIYFHDITEYKLVQEKMSLQNQYLSSLHETTLALMNRLNLDELLKAIVTRSAE 367 Query: 209 QISANDEVLFLKQGH-------EIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKT-S 260 + +FL + + + EG + I K S Sbjct: 368 LSGTDHGFIFLIDNNNPSELVLRFGTGTYKQMVGIRLKPGEGMVGTVWQTGEPLIVKDYS 427 Query: 261 AVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELV 320 + P + + GG L + II + + Q E L Sbjct: 428 SWPGKSSIFSHIKIHGGIALPLKSEGKINGILGIIY-----------IEKNQNLESNNLS 476 Query: 321 NTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI 380 F ++ ++ +A + + +AE K E L L +D + Sbjct: 477 LLTGFAQLASIALD-------NANLYQAAQQELAERKRIE----EILRYLAYHDSLTELP 525 Query: 381 KNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKY 431 + N LAV + L + V G D +++++ + QR ++ Sbjct: 526 NRTLFNDRLSMALNQAHRNKNKLAVMFLDLDHFKKVNDTLGHDIGDQLLKGIAQRFSKLL 585 Query: 432 AQCCDIVTFNADLYLLLCRENVQTFTRKI---AMVNDFDSSFGYRNLRI----HKSAICE 484 + I D + +L + I +++ + + N Sbjct: 586 RKGDTIARIGGDEFTILLHNITRAENASIVADKIIDTLANPWIIGNHEFHITTSIGIALY 645 Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELF 544 P G +A S + A+ ++ + + F + + N+R A++ E Sbjct: 646 PDDGTDAESLLKNADAAMYQAKEMGRNNYQFYTPTMNAQTLRRFELENNLRRALDRKEFV 705 Query: 545 LVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGE 604 + YQP V+I+T I+G EAL RW +RG+ISP +FI +AE+ G I +G I++ A + Sbjct: 706 IYYQPQVEIHTGKIVGVEALIRWQHPQRGMISPAEFIPMAEETGLIIPIGEWILRRACAQ 765 Query: 605 FRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERI 664 + + R + +N+S Q +PH + + ++++ GL L +EITE++ + Sbjct: 766 NKAWQDRGF--SPMRVTVNLSARQFLQPHLPQYISNVLEDTGLGPQWLELEITESLAMKD 823 Query: 665 NEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKI 722 + +LRK G+ ++IDDFGTG S+L + D +K+D F D+ I Sbjct: 824 VAFTEKTLIELRKMGITLAIDDFGTGYSSLNYLKRLPIDILKIDRSFIHDLNTESDDVAI 883 Query: 723 VRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 + I L ++ V+AEGVE+++ L + C QGYL+ KP+P ++ Sbjct: 884 ISAIITLGHNLKMKVVAEGVETKEQLMFLRQQQCDLMQGYLFTKPLPVRELEQ 936 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 770 bits (1988), Expect = 0.0, Method: Composition-based stats. Identities = 119/598 (19%), Positives = 234/598 (39%), Gaps = 32/598 (5%) Query: 199 NWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEK 258 + AN + H + R++ I +S G I D+++ ++ Sbjct: 370 RLLQEERTAELAGANSALETEIAEHRDAEEALRQRQRAIDSSSNG-IMITDALELDH--- 425 Query: 259 TSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTE 318 + N FE Y +L + +L + + + R+ Sbjct: 426 -PIIYVNPAFERITGYAASEVLGRNPRLLCSGDREQLG---LEVIRVALCELREGHAELR 481 Query: 319 LVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESG 378 L + + + G+ + I N I E K E +L ++D +G Sbjct: 482 NYRKDGSLFWNALSVSPVLNAAGEVTNYVGIVNDITERKRYE----EQLEYQSNHDGLTG 537 Query: 379 FIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAE 429 + + + AV I L + + G D +K+++ +R++E Sbjct: 538 LPNRNLLGDRIGQALTYAERYQRQTAVFFIDLDHFKFINDSLGHDMGDKLLQIAARRLSE 597 Query: 430 KYAQCCDIVTFNADLYLLLCRENV---QTFTRKIAMVNDFDSSFGYRNLRI----HKSAI 482 + D ++++ + + + + + Sbjct: 598 CVRSIDTVARHGGDEFVIVLSDLAVSEDAAKVARKIQDAVCRPYQIGEHELVVSCSTGIS 657 Query: 483 CEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGE 542 P G +A + +A+ + + F F + + + + + +R A+E E Sbjct: 658 LYPKDGSDAQVLLKNADVAMYRAKQCGRNNFQFYTGDLNDIVLARLTMEKYLRRALERDE 717 Query: 543 LFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAM 602 + YQP VD+ + I G EAL RW S E G ISP FI +AE+ G I +G +++TA Sbjct: 718 FLVHYQPKVDLLSGRITGMEALVRWQSPELGFISPASFIPLAEETGLIVAIGEWVLRTAC 777 Query: 603 GEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIE 662 + + + ++ +N+SP Q + + I +E GL + +E+ E+++ Sbjct: 778 AQNKAWQDDGL--PPMVVAVNLSPRQFRQEDLADTVHRIAEETGLAPRYIELEVVESLLM 835 Query: 663 RINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--G 720 + ++ L++ GV++++DDFGTG S+L D +K+D F DI Sbjct: 836 DDVDGAVAMLDALKELGVQLTMDDFGTGYSSLSYLKRFPFDMMKIDQSFVRDITRDPGSA 895 Query: 721 KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 IVR + LA + V+AEG+E+E L L C + QG+ + +P+P + +++ + Sbjct: 896 AIVRTVISLAHTLNLRVVAEGIETEGQLGYLRGLACDEMQGFYFSRPVPAAEFEQMLR 953 >UniRef50_B0CC32 Diguanylate cyclase/phosphodiesterase, putative n=2 Tax=Cyanobacteria RepID=B0CC32_ACAM1 Length = 886 Score = 768 bits (1985), Expect = 0.0, Method: Composition-based stats. Identities = 158/865 (18%), Positives = 327/865 (37%), Gaps = 109/865 (12%) Query: 8 IKIRLIILFLLAALSFIGLFFIINY----QLVSERAVKRADSRFELIQKNVGYFFKDIER 63 ++ LI+LF+L L +GL ++ + + + A + + I + + + Sbjct: 20 LRFTLIVLFVLQLLVSVGLVGYLSLRNGEEAIEDLANQLMSETGDRISERLNIYLL-TPH 78 Query: 64 SALTL-KDSLYL----LKNTEEIQRAVILKMEMMPFL----------DSVGLVLDDNKYY 108 L +D+L + L + + ++R + ++ + + VGL ++D+ Sbjct: 79 QVNQLNEDALDMGQLQLNDLQSMERHFWRQSQVFKLISYIQFGNLQGEFVGLAVNDDGTL 138 Query: 109 LFSRRA-NDKIVVYHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDS-NNSWNPAYNC 166 + + Y + + I +F+ +RPW + + +W Y Sbjct: 139 TYQVTEETGALQTYSIDTKGDR---KQYLKISPNFDARQRPWYIVPQQADKPAWTEIYPW 195 Query: 167 FDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISAND--EVLFLKQGHE 224 P ++ TL D + DL+ ++++L ++S D L++ + Sbjct: 196 VSPP---TLAITLGQPYYDAQGKFQGILATDLSLAQISDFLKELSLCDSSRTFILERSGD 252 Query: 225 IIAKNQLAREKLIIYNSEGNYNIIDSVD-------------------------------- 252 I+A + + + G S D Sbjct: 253 IVATSSNELPFVWRNHKPGRLMATHSEDGVVQATAAYLAKQAGGLQQINARRQIQFSIKG 312 Query: 253 TEYIEKTSAVPNNA--LFEIYFYYPGGNLLNA----SDKLFYLPFAFIIIVLLVVYLMTT 306 Y + + + + + P + + + L F + + + + Sbjct: 313 QRYFLQVTPLQDQHGLDWLSVLVIPESSFMAQIDANTRTTLLLCFLALGCAIYLGVCTAS 372 Query: 307 RVFRRQFSEMTELVNTLAFLPDSTD------QIEALKIREGDAKE-IISIKNS------- 352 + R + D T +I L+ E + + + Sbjct: 373 WIARPILRFSQASQAISSGQFDQTVAVKGFKEIGVLQQSFNRMAEKLQATFSDLEAANLA 432 Query: 353 ----IAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE----------SNNNQYLAVGI 398 +AE + AE + L +D +GF +E ++ AV Sbjct: 433 LTKEVAERQRAE----EQFKHLALHDPLTGFPNRAFFMEQLERAVKQTQRHSQYLFAVLF 488 Query: 399 IKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR---ENVQT 455 I L + V G + ++++ + ++ + D +++L E Sbjct: 489 IDLDRFKIVNDSLGHEVGDQLLGAIAHQLHSLVRATDIVARLGGDEFVILLEPIEEVNDA 548 Query: 456 FTRKIAMVNDFDSSFGYRNLRIHKSAICEPL----QGENAWSYAEKLKLAISSIRDHMFS 511 +V + + N ++ SA A +A+ ++ + Sbjct: 549 VRVADRIVQELSAPIDLSNRQVFISASVGIALSSPDYSQATDILRDADIAMYRAKNRGKA 608 Query: 512 EFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAE 571 F ++ + + + + ++R A+ +L + YQPIV+I T + G EAL RW + Sbjct: 609 CFEIFNERMYTQALDRLQLENDLRQAIANQQLQVFYQPIVNIQTGKLSGFEALGRWPHPQ 668 Query: 572 RGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNE 631 RG I P +FI IAE+ G I LG I+++A + + Q + + +N+S QL + Sbjct: 669 RGFIPPTEFIPIAEETGLIIPLGEWILQSACQQMATWLQTYPSAVKYTISVNMSIKQLKD 728 Query: 632 PHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGL 691 P+ + ++++GL + L +E+TE+++ + + QL+++G+++SIDDFGTG Sbjct: 729 PNLLTKVDRALEQSGLNRHQLSLELTESILMENVIELKVILNQLKERGIQLSIDDFGTGY 788 Query: 692 SNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVAR 749 S+L + ++IK+D F I G +I+ I +LA + I+EGVES+ Sbjct: 789 SSLSYLHLFPFNTIKIDQSFITRIGAQGENQEIIETIINLASQLNMDAISEGVESKQQLN 848 Query: 750 ELIKLGCVQAQGYLYQKPMPFSAWD 774 L KL C +AQG + +P+ A + Sbjct: 849 YLKKLLCQKAQGNYFSQPLSSDAAE 873 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 768 bits (1985), Expect = 0.0, Method: Composition-based stats. Identities = 137/741 (18%), Positives = 274/741 (36%), Gaps = 55/741 (7%) Query: 57 FFKDIERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRAND 116 + D +R + D K E+ ++ E++ + ++ + F + + Sbjct: 409 YRDDSQRIVTLIIDISSRKKAEAELVKSQQDYRELVESVQAIVWRAIPGGKFTFVSKEAE 468 Query: 117 KIVVYHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCIS 176 ++ Y + G + +P R W V Y + + Sbjct: 469 ALLGY----PLAQWTTDPGFWVD-KIHPDDRDWVVE-----------YCRTESLKLQSFD 512 Query: 177 FTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKL 236 F + D ++ + I + + + ++ K A R Sbjct: 513 FDYRMIAADGRVVWMKDIVKVIPNMSNTRPAELVGVMLDITASK------AAEADLRLAR 566 Query: 237 IIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIII 296 ++++ +I + N ++ Y ++ + + Sbjct: 567 QVFDNTAEGIVITDPAFR------VLEVNQAYQQITGYDKEEIIGKLPSV--MQAGLHEA 618 Query: 297 VLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEM 356 T R + E+ + P+ I + +G + +++ I + Sbjct: 619 AYYEGIWQTLRREGQWVGEIWNRRKSGESYPEWL-SISQVADAKGSVQNYVAVFTDITQR 677 Query: 357 KDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAV 407 K +E +L L ++D + + E N +AV I L + + Sbjct: 678 KLSE----ERLQFLANHDALTHLPNRALLQERIDQALFRAQRNKTAIAVLFIDLDRFKII 733 Query: 408 EAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTF---TRKIAMVN 464 G + ++++ +R+ E + + D +++L + T T ++ Sbjct: 734 NDTLGHQTGDMLLQEAAKRLKECLRETDTVARQGGDEFVVLVEDCGDTDYLNTIARKIMA 793 Query: 465 DFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAK 520 F + P G + S + A+ ++ + F F Sbjct: 794 TLAQPFILVGRELFISASIGISVYPDDGLDTASLLKHADAAMYRAKESGKNTFRFYAAEA 853 Query: 521 LNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKF 580 E + + N+R A+E E L YQP VD+ ++ I+GAEA+ RW E G++SP++F Sbjct: 854 NTNSVELLTLENNLRRAVERNEFVLHYQPKVDLRSQKIIGAEAVVRWQHPELGMLSPMQF 913 Query: 581 ITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTT 640 I +AE+ G I ++G I++ + + + Q + + +N+S Q + + Sbjct: 914 IPLAEETGLIIDIGAWIMRESCRQAVEWQQ--LTGQNVRVAVNLSARQFRDETLRQTIAD 971 Query: 641 IMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEI 700 + E+GL + L +EITE++I E ++ G + IDDFGTG S+ Sbjct: 972 ALTESGLTPDCLELEITESMIMHNAERAREVLQHFHDLGAHVLIDDFGTGYSSFGYLKHF 1031 Query: 701 NPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQ 758 DS+K+D F DI I + I +A +I V+AEGVE+++ L K GC Q Sbjct: 1032 PIDSLKIDRSFVRDIPDDVDDMAITQAIIAMAHSLQIKVVAEGVETQEQLAFLKKQGCDQ 1091 Query: 759 AQGYLYQKPMPFSAWDKSGKL 779 QG+L+ +P+ + + KL Sbjct: 1092 IQGFLFSEPLHSHDFVRMLKL 1112 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 758 bits (1959), Expect = 0.0, Method: Composition-based stats. Identities = 139/660 (21%), Positives = 243/660 (36%), Gaps = 34/660 (5%) Query: 142 FNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNWR 201 F P+ D + +W+ + K S L L V I+V L Sbjct: 294 FYDQPEPYDHVFDVAGKTWSMVVSTPSMLFLKNSSSALWAFLVGLLLSVVSAIYVQLIVD 353 Query: 202 YLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSA 261 Q+ +D L+ ++ + + AR+ I S + I + A Sbjct: 354 RSRRI--QLLVDDRTAQLRTVNDDLIADIAARKHAEHELQLRERAIEASANAIIIARAVA 411 Query: 262 VP-----NNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEM 316 N F Y L + + + L + + +R+ + Sbjct: 412 PDYPLEYVNPAFTRITGYSPEEALG---RNIGFLWGKDWEQPGIEELRSIALEKREGHAV 468 Query: 317 TELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQE 376 L S I +K G+ + I K E E L + D Sbjct: 469 LRNYRKDGALFWSDLYIAPVKDDTGEVSHFVVALYDITATKRYESE----LEFQTNRDAL 524 Query: 377 SGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRI 427 +G + + N + + + L + V G + +++ + +R+ Sbjct: 525 TGLANRSLLRDRLSQAISYAHRYNHPIWIAFVDLDRFKFVNDTLGHQAGDLLLKAIAERL 584 Query: 428 AEKYAQCCDIVTFNADLYLLLCRENVQT---FTRKIAMVNDFDSSFGYRNLRI----HKS 480 + D ++L+ E V +++ Sbjct: 585 QHAVRDTDTVSRMGGDEFVLILPERVDAGLSTGIVQRIMDGIAQPLTIEGHEFFISSSIG 644 Query: 481 AICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEI 540 P G + +A+ ++ + F F + E + + ++R+AME Sbjct: 645 VAVYPNDGVTPEELIKHADIAMYRAKETGRNNFQFYTSSMNERALERLRLEGDLRNAMER 704 Query: 541 GELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKT 600 GE L YQP +D+ T I+G EAL RW E G+I P++FI +AE+ G I +G +I+ Sbjct: 705 GEFILHYQPQLDLRTGKIVGVEALIRWQHPELGMIPPMRFIGLAEETGLIVPIGAWVIRE 764 Query: 601 AMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETV 660 A + + + + + +N+S Q + E ++E L L +E+TE++ Sbjct: 765 ACRQNKVWQEHGLGS--LRMSVNLSARQFAQQDLLESIALALEETQLPPQCLEIELTESL 822 Query: 661 IERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--T 718 + +H + +L+ GV++SIDDFGTG S+L D +K+D F DI Sbjct: 823 VMADVDHAIGILRELKALGVQLSIDDFGTGYSSLSYLKRFPIDVLKIDRSFVNDITTDPD 882 Query: 719 AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 IV I LA R+ VIAEGVE+E+ L + C Q QGY + +P+ A + K Sbjct: 883 DAAIVASIISLAHSLRLTVIAEGVETEEQLAYLQQHDCDQIQGYFFSRPITADAMEVMLK 942 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 754 bits (1948), Expect = 0.0, Method: Composition-based stats. Identities = 129/603 (21%), Positives = 246/603 (40%), Gaps = 37/603 (6%) Query: 197 DLNWRYLNEYLDQISANDEVLFLKQGHEIIA--KNQLAREKL--IIYNSEGNYNIIDSVD 252 ++ W LD A+ ++ I K + A +L +++S G +I + Sbjct: 331 EIRWVREKANLD-FDAHGNAVYAIGTVRDITRYKQEEATLRLAARVFDSSGEAILITDEN 389 Query: 253 TEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQ 312 V N F Y ++ + ++ L Sbjct: 390 VR------VVAVNHSFVAMSGYRSEEVMGKNPRM--LSSGRHDAEFYRAMWDDINQHGYW 441 Query: 313 FSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLIS 372 E+ + + P I A++ G ISI E +AE + L Sbjct: 442 QGEIWDKHKSGRIYPKW-MSITAVRDEHGKVVNYISIARDTTEQTEAEKN----IHFLAY 496 Query: 373 YDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKL 423 YD +G + + + ++ + L + + G +++++ + Sbjct: 497 YDVLTGLPNRTLLRDRLGQMIAVAHRDKHQFSLIFLDLDRFKYINDSMGHSVGDRLLQSV 556 Query: 424 CQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFT--RKIAMVNDFDSSFGYRNL----RI 477 RI + + + D +++L RE ++ ++ + + + Sbjct: 557 ALRIQDCVREGDTVARLGGDEFIVLLREAGESAASVVAQKLLIALATPYDLDGQVISTQA 616 Query: 478 HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHA 537 P Q ++A + + +A+ ++ + F F ++ + +++R A Sbjct: 617 SIGISIYPDQAQDADTLIKNADMAMYRAKEEGRNNFQFFVPEMNFRVDLLFSMEKDLRLA 676 Query: 538 MEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQI 597 +E GELFL YQP D+ + + G EAL RW +G +SP +FI +AE+ G I +G + Sbjct: 677 LERGELFLQYQPQADLASGTLSGVEALIRWDHPVKGQVSPAEFIPVAEETGQIVAIGEWV 736 Query: 598 IKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEIT 657 ++TA + + + D + +N+S QL +P E +++ E GL A L +EIT Sbjct: 737 LRTACSQMAEWRKTGM--HDLTIAVNLSIRQLRQPDLAELIKSVLLETGLDARHLELEIT 794 Query: 658 ETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG 717 E ++ N+ + + +++ GV++SIDDFGTG S+L ++ + +K+D F DI Sbjct: 795 EGIMMGDNQAAFRFLSEMQDLGVQLSIDDFGTGFSSLNYLKQMPVNKLKIDQSFIRDIET 854 Query: 718 T--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 I+R I L + VIAEGVE+++ L GC + QGY Y +P+ + + Sbjct: 855 DEGDAAIIRSIISLGHRLNLRVIAEGVETQEQLDFLRIRGCDEIQGYFYSRPLLAEDFMR 914 Query: 776 SGK 778 K Sbjct: 915 FVK 917 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 754 bits (1947), Expect = 0.0, Method: Composition-based stats. Identities = 125/565 (22%), Positives = 226/565 (40%), Gaps = 34/565 (6%) Query: 233 REKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFA 292 R+ ++ S II ++ ++ N F Y +L + L Sbjct: 513 RQAATVFESTREGVIITDLEGRILD------VNRAFTEISGYSEPEVLGRNPSLLRSNRQ 566 Query: 293 FIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNS 352 + + E+ + P I + +G + + Sbjct: 567 DH--AFYQAMWHSLKTTGHWQGEIWNRRKSGELYPQ-ILTINTVADSQGRPSHYVGVMTD 623 Query: 353 IAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCG 403 I+++K +E +L L+ YD + + +AV + L Sbjct: 624 ISQLKQSEA----RLEHLVHYDPLTNLPNRRLVQSRLEHALERADRQGGRVAVLFVDLDR 679 Query: 404 LEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENV---QTFTRKI 460 + V G + ++ L +R++E+ + + D +L+L Sbjct: 680 FKTVNDSLGHPSGDVLLELLARRLSERVREDDTLARLGGDEFLVLLENLQRPEDAAAVAE 739 Query: 461 AMVNDFDSSFGY-RNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIF 515 ++++ F + P G + +A+ ++ + + F Sbjct: 740 SLLSLLQQPFHLPNGQELYVGASIGISLYPDDGHTVTDLIQHADVAMYQAKEEGRNTYRF 799 Query: 516 CDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGII 575 + E + + + A+ E L YQ +D+ ++G EAL RW SA G++ Sbjct: 800 YTPSLTQTARERLGLEARLHRALASEEFVLHYQAQIDMRDGRLIGCEALVRWHSATEGLV 859 Query: 576 SPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFH 635 +P +FI +AE+ G I LG +++ A + + + R D + +N+S QL P Sbjct: 860 APDRFIPLAEETGLIVPLGEWVLRQACADCQSWRARGLT--DLTVAVNLSGRQLRSPDLV 917 Query: 636 ERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLK 695 ER T +++E GL A L +E+TE++I E + L+ GVR+SIDDFGTG S+L Sbjct: 918 ERVTRVLRETGLPAERLKLELTESMIMDQREQALERLRALKALGVRLSIDDFGTGYSSLA 977 Query: 696 RFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIK 753 + D +K+D F DI +I I +AR R+ VIAEGVE+ + LI+ Sbjct: 978 YLKRLPIDELKIDRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEGVETPEQCDFLIR 1037 Query: 754 LGCVQAQGYLYQKPMPFSAWDKSGK 778 GC QGYL+ +P+P A+ + + Sbjct: 1038 QGCTAGQGYLFGRPLPAEAFAQVMR 1062 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 753 bits (1944), Expect = 0.0, Method: Composition-based stats. Identities = 121/558 (21%), Positives = 220/558 (39%), Gaps = 33/558 (5%) Query: 240 NSEGNYNIIDSVDTEYIEKTSAVP-NNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVL 298 N ++ T + N F Y ++ + + Sbjct: 317 NLARKVIEASLDGIMIVDSTQKIEFVNPAFTHMTGYTAEEIIGKNPNVLKSGHHDETFYK 376 Query: 299 LVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKD 358 + ++ + + E+ P+ I ++ GD + +I + I E K Sbjct: 377 HMYTVLEAQDY--WQGEIWNRRKNGEIYPEWL-TINVIRDDTGDITQYAAIFSDITERKK 433 Query: 359 AEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEA 409 E ++ +L +D + + + Q LA+ + L + + Sbjct: 434 TE----ERIKNLAYFDVLTALPNRRLFTDRLQIAIANAHRHGQQLAIMFLDLDLFKRIND 489 Query: 410 VFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR--ENVQTFTR-KIAMVNDF 466 G ++++ + RI+ + + D + +L ++++ + ++ Sbjct: 490 SLGHGVGDQVLVETAARISHCVREGDTVARLGGDEFTVLLPELDHLEDVAKLAERVIAHV 549 Query: 467 DSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLN 522 F + + P G + + A+ +D + + A Sbjct: 550 KQPFLVDDNELYVTTSIGIAVYPEDGTTVEALIKNADTAMYRAKDLGRNSYQLYTAAMNA 609 Query: 523 EIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFIT 582 E + + ++RHA+ E LVYQ VD + G EAL RW E G++SP+ FI Sbjct: 610 RSFERLTMESSLRHALTREEFRLVYQVKVDSEDGRMSGVEALVRWHHPEMGLVSPVDFIP 669 Query: 583 IAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIM 642 +AE +G I+++G +++TA + +H+ + +NVS Q E E + Sbjct: 670 LAEAMGVISDIGEWVLRTACRQCKHWMDLGL--PPVRIAVNVSAQQFVETDVPEVVARAL 727 Query: 643 KENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINP 702 +E GL L +E+TETV+ + + ++ LR GVRISIDDFGTG S+L + Sbjct: 728 RETGLPPQYLELELTETVLMQRVDEVVAVLKSLRAMGVRISIDDFGTGYSSLSYLKRMPI 787 Query: 703 DSIKVDSQFTGDI-------FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLG 755 D++KVD F DI +IV I +LA ++ IAEGVE+ + A L G Sbjct: 788 DALKVDRSFVNDIFDGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGVETPEQAEFLRSKG 847 Query: 756 CVQAQGYLYQKPMPFSAW 773 C + QGYL +P+ Sbjct: 848 CDEVQGYLISRPVSGEDL 865 >UniRef50_B8HQZ5 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HQZ5_CYAP4 Length = 872 Score = 751 bits (1939), Expect = 0.0, Method: Composition-based stats. Identities = 164/850 (19%), Positives = 309/850 (36%), Gaps = 102/850 (12%) Query: 10 IRLIILFLLAALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKD----IERSA 65 I I+ +A + Q + E + I+ ++ FF+ ++ + Sbjct: 22 IPFILQIGVAVGLIGWFSLWNSQQAIDEATGELRRKTANRIKSSLDSFFEKPYDLVQINE 81 Query: 66 LTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIV------ 119 +T++ L +T +QR ++ P++ + Y SR ND+ + Sbjct: 82 VTIRQGLLNPNDTVAMQRYFWEQIHFFPYMTYISYGNSQGHYIGASRSLNDESLRVVLSN 141 Query: 120 --VYHQEQVNGPLVDESGRVIFAD---FNPSKRPWSVASDDS-NNSWNPAYNCFDRPG-K 172 H + + + F+ RPW + S W P Y F P Sbjct: 142 PSTNHALTTYATDSQGKLKKVLSTVPRFDARLRPWYQSGAGSQQPVWYPIYEYFSHPSLG 201 Query: 173 KCISFTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQ--ISANDEVLFLKQGHEIIAKNQ 230 +++ + + + + DL + ++++L I + ++ ++A + Sbjct: 202 IGVAYPVRTSSGELQ----GVLTADLELQQISQFLHSLTIGKTGKAFIIEPNGLLVASSA 257 Query: 231 LAREKLIIYNSEGNYNIIDSVD----------TEYIEKTSAVPNNAL------------- 267 I I S + + + S + + Sbjct: 258 PEVPYNISKGKLKRLEAIASSNPLIQTAAQYLKAHFDDLSQIQTSQQLQFDQKGERYFLQ 317 Query: 268 ----------FEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMT 317 F I P + S + L ++ LL ++T R + Sbjct: 318 VLPYREWGLNFLIVVVVPETDFTATSQENTQLTIMLCLVALLAAIALSTWTSRWLVRPIL 377 Query: 318 ELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQES 377 + L E ++E+ S+ + M + +L +D + Sbjct: 378 NTIEAANALSQGDWSQSV---PEPHSQELASLARAFNRMANQLRVSFQQLEHHARHDSLT 434 Query: 378 GFIKNMAIIES------NNNQYLAVGIIKLCG----------------LEAVEAVFGVDE 415 G + A ++ L L + V G Sbjct: 435 GLLNRDAFRVRLEEAFARHDWQL------LHQPGEKSLLAVLLLDLDYFKLVNDSLGHIL 488 Query: 416 RNKIVRKLCQRIAEKYAQCCD----IVTFNADLYLLLCRENVQTFTRKIAMV----NDFD 467 ++++ ++ QR+ + D I F D +++L +N+Q T + D Sbjct: 489 GDQLLIEVTQRLLHCLSNFDDANYAIGRFGGDEFVILI-DNIQDVTTATRLAGQICKDLQ 547 Query: 468 SSFGYRNLRIHKSAICEPLQGEN----AWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNE 523 SF S + A ++ + +A+ + + + + D Sbjct: 548 RSFTLSGNEFFISTSIGIVLSTTGDRQADTFLKNADIALYRAKANGKAGYEVFDAQVHTG 607 Query: 524 IEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITI 583 ++ + + ++ A++ GEL L YQPI D+ + G EAL RW G+ISP FI I Sbjct: 608 AKDRLRLETDLHRAIDRGELMLSYQPIFDLQRDQLAGFEALVRWQHPTEGLISPSVFIPI 667 Query: 584 AEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMK 643 AE+ I +LG+ +++ A + + + Q+ D ++ +N S Q +P ER I+ Sbjct: 668 AEESELIVKLGWWVLQQACTQMQTWQQQFPCSQDLVISVNFSGKQFFQPDVLERIWQILD 727 Query: 644 ENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPD 703 + GLK L +EITETV+ E +++L G+ +SIDDFGTG S+L + Sbjct: 728 QTGLKPQHLKLEITETVLMSYGEVTKAKLKRLSDAGIHLSIDDFGTGYSSLSYLHRFPVQ 787 Query: 704 SIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQG 761 ++K+D F ++ G +IV I LA R+ VIAEGVE+ + +L GC Q QG Sbjct: 788 TLKIDRSFVSEMGVQGEGLEIVEAIVTLAHKLRLDVIAEGVETREQLEKLRHFGCDQVQG 847 Query: 762 YLYQKPMPFS 771 +L P+ Sbjct: 848 FLLSPPLLPE 857 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 748 bits (1933), Expect = 0.0, Method: Composition-based stats. Identities = 149/619 (24%), Positives = 250/619 (40%), Gaps = 30/619 (4%) Query: 175 ISFTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLARE 234 I+ + + + D +A + +L R + +S + + HE I + + A + Sbjct: 324 IARPISLISQAADKVAGGDLEYELPARLGEGEVAHLSTAIHDMVVNLTHE-IKQRKEAEQ 382 Query: 235 KLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFI 294 L + N + T + + V N F Y +L KL L Sbjct: 383 GLRLSAKVFESNTEAIMIT--DAEQNIVMVNQAFTQITGYGADEVLGQRPKL--LSSGRH 438 Query: 295 IIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIA 354 + R E+ P+ I AL+ +++ I Sbjct: 439 GPEFYEAFWHALRANDLWRGEIWNKRKNGEIFPEWV-TISALRDETSQISHYVAVFLDIT 497 Query: 355 EMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLE 405 E K E ++ L +YD +G + + NN +AV I L + Sbjct: 498 ERKKEE----ERINYLANYDVLTGLPNRYLLSDRIEQAFSSAQRNNFKVAVLFIDLDYFK 553 Query: 406 AVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE---NVQTFTRKIAM 462 + G D + +++ + R+ + I D ++ L E + + M Sbjct: 554 NINDSLGHDIGDALLKLVAARLKTCLRRSDTIARLGGDEFVALLSELDSSEEVIFVAEKM 613 Query: 463 VNDFDSSFGYRNLRIHK----SAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDD 518 + F ++ P GE + LA+ +D + F F Sbjct: 614 IESLTEKFTLGEYQLSITPSIGICIYPDDGETSVELLRNADLAMYQAKDDGRNNFKFYSP 673 Query: 519 AKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPL 578 + E + + +R A+ +L + YQP V + + + G EAL RW E G ISP Sbjct: 674 DMNRKALERLKLETFLRVAIVQQQLSVYYQPKVSVLSGKMTGMEALLRWQHPELGFISPA 733 Query: 579 KFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERF 638 FI IAE+ G INE+G +++ + + R + + + +N+S QL + +F R Sbjct: 734 VFIPIAEETGLINEIGDWVLRQSCLQARLWQAQGYDIVP--IAVNLSARQLKQDNFAARV 791 Query: 639 TTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFY 698 TI++E GL A+ L +EITE+++ E +EQLR GVR+++DDFGTG S+L R Sbjct: 792 VTILREAGLDAHYLVLEITESMLMSTGESGLQILEQLRDDGVRLALDDFGTGYSSLSRLK 851 Query: 699 EINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGC 756 + DS+K+D F DI IV LA + V AEGVE+++ + L C Sbjct: 852 NLPLDSLKIDQSFVRDIVTDPNDASIVSATAVLAHALNLKVTAEGVETQEQLDFIRMLNC 911 Query: 757 VQAQGYLYQKPMPFSAWDK 775 + QGYL+ +P+P S K Sbjct: 912 EEYQGYLFSRPIPASEVVK 930 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 746 bits (1927), Expect = 0.0, Method: Composition-based stats. Identities = 116/573 (20%), Positives = 217/573 (37%), Gaps = 35/573 (6%) Query: 228 KNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLF 287 K R ++++ N D + F F LL + L Sbjct: 399 KESEERYRMLVENQADLVIKTDMTGNLLFV-------SPSFCKLFGQTEEKLLGKA-LLP 450 Query: 288 YLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEII 347 + + + M ++ ++ + I + G A+ II Sbjct: 451 VIMLPEQLATAAGMEQMICSDTSYYREYLSPTREGKRWIGWALRCI---FNQSGQAEAII 507 Query: 348 SIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGI 398 + I + K AE + L +D +G + + ++Q +A+ Sbjct: 508 GMGRDITDRKTAEST----IEQLAYHDPVTGLPNRTLLHDRLQLAINRAERDSQGVAILF 563 Query: 399 IKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL---CRENVQT 455 + L +A+ G ++++R + R+ + + D +++L + Sbjct: 564 LDLDRFKAINDSLGHAMGDQLLRLVGNRLLDCVRSSDTVARLGGDEFVVLISALDNDHAV 623 Query: 456 FTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFS 511 + + ++ + + + P G +A + +A+ ++ + Sbjct: 624 GSVVMKILEQLCEPYQIDDHEVYTSSSIGISLFPRDGRDAEELLKNADMAMYQAKEAGRN 683 Query: 512 EFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAE 571 F E + + +R A+E E FLVYQP +++ + I G EAL RW + Sbjct: 684 TCHFFSPELNMRATERLLLESTMRRALEREEFFLVYQPQMELRSGHIAGIEALLRWRHPD 743 Query: 572 RGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNE 631 G++ P FI IAE+ G I LG ++ A + + Q + + +NVS Q + Sbjct: 744 LGVVPPNNFIPIAEETGLIVPLGEWVLAEACRQAVRWQQEG--QPPLRMAVNVSARQFRQ 801 Query: 632 PHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGL 691 + R I+ E GL L +E+TE+ + E L + QL+K G+ +SIDDFGTG Sbjct: 802 RNLGLRIEKILMETGLDPALLELELTESAVMENPEEAILTLRQLKKMGITLSIDDFGTGY 861 Query: 692 SNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVAR 749 S+L D +K+D F + I I LA ++ V+AEG+E + Sbjct: 862 SSLSHLKHFPIDRLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVVAEGIEHSEQME 921 Query: 750 ELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE 782 + + C QGY +P+ + K + E Sbjct: 922 FMHQRHCDTMQGYYLSRPVTAEEFGTFLKRLGE 954 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 744 bits (1923), Expect = 0.0, Method: Composition-based stats. Identities = 118/530 (22%), Positives = 207/530 (39%), Gaps = 27/530 (5%) Query: 261 AVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELV 320 V N F Y +L + L L + E+ Sbjct: 872 IVMINQAFTRITGYSEVEVLGRNPSL--LASGRHDQAFYQSMWESIESLGHWQGEIWNRR 929 Query: 321 NTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI 380 + P+ I + +G I I + K+AE + L +D +G Sbjct: 930 KDGSVYPEWLL-ISRV-DGDGAPTHYIGTFIDITQHKEAEAS----IQRLAHFDALTGLP 983 Query: 381 KNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKY 431 + E + LA+ + L + V G + ++ ++ +R+ Sbjct: 984 NRSLLEERVRHDLARAHRGREALALMFVDLDRFKNVNDSLGHRVGDALLIQVAERLRRAV 1043 Query: 432 AQCCDIVTFNADLYLLLCR--ENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEP 485 + D ++++ + ++ ++ + P Sbjct: 1044 RDEDTVSRLGGDEFIVVLPSTDADGAAHVAAKLLEVMAPAYRIEQHELTCSLSAGIAMYP 1103 Query: 486 LQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFL 545 GE+ + + A+ + + + F N+ I ++R A+E GEL L Sbjct: 1104 ADGESFEALSMSADTAMYRAKQSGRNAYCFFTAEMQERSARNLQIENDLRRALENGELRL 1163 Query: 546 VYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEF 605 YQP + R ++GAEAL RW + G++SP++FI IAE+ G I +G +++ A+ + Sbjct: 1164 HYQPQFTLADRRLVGAEALLRWQHPQLGMVSPVEFIPIAEECGLILPIGEWVLRAAVSQL 1223 Query: 606 RHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERIN 665 R + Q + +N+S Q + + + I+ GL A L +E+TE+V Sbjct: 1224 RVWQQEGL--PPMTVAVNLSAVQFRQASLTDVVSRILDAEGLAAQFLELELTESVAMDNP 1281 Query: 666 EHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIV 723 +++LR GVR+SIDDFGTG S++ +K+D F D+ IV Sbjct: 1282 LAAIATMDKLRALGVRMSIDDFGTGYSSMSYLKRFRVHKLKIDRSFVADLAADPEDEAIV 1341 Query: 724 RIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 LAR + IAEGVESE L GC +AQGYL+ +P+ + + Sbjct: 1342 TATISLARDLGLQTIAEGVESEAQLAFLRAKGCDEAQGYLFSRPLAPAQF 1391 >UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31M30_SYNE7 Length = 917 Score = 744 bits (1921), Expect = 0.0, Method: Composition-based stats. Identities = 154/715 (21%), Positives = 276/715 (38%), Gaps = 53/715 (7%) Query: 85 VILKMEMMPFLDSVGLVLDDNKYY---LFSRRANDKIVVYHQEQVNGPLV-DESGRVIFA 140 ++ E L VG + D + + + + + V + NG LV DE G V+FA Sbjct: 224 LLHHDETGELLSLVGNIRDITEEHHILSLVQDSETRFQVLIESNPNGILVLDEQGAVLFA 283 Query: 141 DFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNW 200 + D S + Y P ++ L + D L V+ V + W Sbjct: 284 NHVAE-----QVFDQSLSELQGKY--LGLPLTLNVTVQLDLVQPDGSLRYVEVSIVPIPW 336 Query: 201 RYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTS 260 + YL ++ ++ L+Q + + Q A E NS + I + Sbjct: 337 QQSKAYLALLT---DITSLQQTQQRLKLLQEATE-----NSPASILITSAEGIIEYV--- 385 Query: 261 AVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELV 320 N FE+ Y ++ + + + +T R E+ Sbjct: 386 ----NPAFELMTGYGADEVIGKNPRFLKSGLMSPSFYQDLWETITAGETWR--GELYNRR 439 Query: 321 NTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI 380 T D T I +K G +++K I E K L +YD + Sbjct: 440 KTGELFWDRT-SISPVKDLAGQIIHFVAVKEDITEQKR----NRELLDHQANYDSLTDLP 494 Query: 381 KNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKY 431 ++ +N + V ++ L + + G + +++++ +R+ Sbjct: 495 NRSLALDRLRQATALSERSNDTVIVMLLDLDRFKNINDTLGHSYGDCLLQEIAKRLRYHL 554 Query: 432 AQCCDIVTFNADLYLLLCR---ENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICE 484 + I D +L++C EN+ ++ + C Sbjct: 555 PREITISRLGGDEFLIICPAVKENIHLEKLSQQLLKIISQPITIEAEELVITASIGVACY 614 Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELF 544 P G A+ S + + ++F E I + ++RHA+E +L Sbjct: 615 PNDGVTPEVLMRNADTAMYSAKRNGGNDFQLFMPTMNAEAHARIQLETHLRHALEQYQLK 674 Query: 545 LVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGE 604 + YQPI+ + ++G EAL RW E G I P +FI IAE+ G I LGY++I+ A + Sbjct: 675 VFYQPIISLQDNHVVGLEALARWHDPELGNIPPDRFIPIAEETGLIIPLGYRVIEQACQD 734 Query: 605 FRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERI 664 + Q+ + F + +N+SP QL F + I++ + + N L +E+TE ++ Sbjct: 735 VAIWQQKYNY--PFWVAVNLSPRQLRSNRFTQITAKILQRHNFRPNYLKLEVTEQMLLDN 792 Query: 665 NEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KI 722 ++ L ++G+ +++DDFGTG S L S+KVD F DI + + Sbjct: 793 TSTIAQMLDTLHRKGIALALDDFGTGYSALSYLRRYPFQSLKVDQSFLRDIPHSTESCAL 852 Query: 723 VRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 V+ I +A + +AEGVE+ + L +GC QGY + +P+P D Sbjct: 853 VKTIVAMAHGLGMQAVAEGVETAEQVEFLKAIGCEYGQGYWFSRPLPAVEIDSFL 907 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 743 bits (1920), Expect = 0.0, Method: Composition-based stats. Identities = 130/602 (21%), Positives = 240/602 (39%), Gaps = 37/602 (6%) Query: 198 LNWRYLNEYL--DQISANDEVLFLKQGHEIIAKNQLARE-KLIIYNSEGNYNIIDSVDTE 254 L W L L D+ + + + + +++ A++ L +++S II Sbjct: 292 LVWANLTAALMRDEGGRPEYFILVVEDISARKQSEEAQQLALTVFDSMLEGVIITDHHRR 351 Query: 255 YIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFS 314 + NA F YP LL + L+ R Sbjct: 352 I------LAVNAAFGEITRYPVEALLGRTPPLWRTAHQD--AAFYRRIWRQLLASGRWEG 403 Query: 315 EMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYD 374 E+ P I ++ +G ++ + + N I+++KD++ +L L YD Sbjct: 404 ELWHRKRDGTPFPLWL-SISCVRDEQGRPRQYVFVFNDISQLKDSQ----EQLERLAHYD 458 Query: 375 QESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQ 425 +G + + LAV I L + + G ++++ + Q Sbjct: 459 PLTGLPNRHLALARLEHALERARRHAFPLAVMFIDLDRFKTINDSLGHQAGDELLVAIAQ 518 Query: 426 RIAEKYAQCCDIVTFNADLYLLLCREN--VQTFTRKIAMVNDFDSSFGYRN-----LRIH 478 R+ ++ Q + D +L++ E Q + A++ D FG+ + Sbjct: 519 RLHQRLRQEDTLARLGGDEFLVVIEEAPVQQVASIAHALLKVVDQPFGFSGGGEAYVGAS 578 Query: 479 KSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAM 538 P G +A A+ + + + F ++ E + + ++R A+ Sbjct: 579 IGISLYPGDGRSASELIRNADAAMYLAKAQGSNAYRFYTESLTRAANERLSMETSLRRAL 638 Query: 539 EIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQII 598 E L YQP+V++ + +LGAE L RW ++ P +FI +AE+ G I LG ++ Sbjct: 639 RCEEFVLHYQPLVELASGRVLGAEVLVRWQPPGEALVPPSRFIPLAEETGLIVPLGDWVL 698 Query: 599 KTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITE 658 A + + + LL +N+SP Q + ++ +GL L +E+TE Sbjct: 699 HEACRQGKAWLDAGL---PLLLAVNLSPRQFLRHDLVGQVRKALQGSGLPPAQLELELTE 755 Query: 659 TVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT 718 + E + L++ GV ++IDDFGTG S+L D +K+D F D+ Sbjct: 756 GALMEQAEQAVKTLHALKRLGVSLAIDDFGTGYSSLAYLKRFPLDKLKIDRSFVRDLPRD 815 Query: 719 --AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKS 776 +IV I + R ++ +AEGVE+ L +LGC QGYL+ P+P A+++ Sbjct: 816 SSDAEIVTTIIAMVRNLKLEALAEGVETPQQLAFLRQLGCDSGQGYLFSPPLPAEAFERW 875 Query: 777 GK 778 + Sbjct: 876 LR 877 >UniRef50_B1HMB6 Sensory box/GGDEF family protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HMB6_LYSSC Length = 782 Score = 743 bits (1918), Expect = 0.0, Method: Composition-based stats. Identities = 139/785 (17%), Positives = 289/785 (36%), Gaps = 58/785 (7%) Query: 15 LFLLAALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKDIERSALTLKDSLYL 74 L + + +I + + + E +++N+ F D T D + Sbjct: 13 LIISVSFILCIPCALIGWVSYKTTYEQITNKTMEGLERNL--FILD------TYIDKMLS 64 Query: 75 LKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLVDES 134 L E A + + + V F ++ + I NG + Sbjct: 65 LPKEEVSLLAQSINADNIEINQGVEDSEIREILDRFQSQSTNIIKTIVT-SHNGTFMFSP 123 Query: 135 GRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKI 194 + +D+ P ++ W + + N + ++ + + K + Sbjct: 124 RLTLSSDYKPLEQGWYKLAVE-NPGIVSITAPRLSKSEPVVTLSRQTSDKK------GVV 176 Query: 195 HVDLNWRYLNEYLDQIS-ANDEVLF-LKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVD 252 V ++ L + Q++ A ++L+ L +++A + N S + Sbjct: 177 AVSISLEDLTRSVSQLTFAEGDILYILDPTGKVVAHPSEKLAEKPKGNHYDEILKNSSGE 236 Query: 253 TEY-----IEKTSAVPNNAL-FEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTT 306 + ++K + N + I + + +F + ++ + + ++ + Sbjct: 237 ISFKDNGNLKKAIFLTNAKTGWRIIAEIDQLKIAQSVKPIFNVTLFVLLFAICLTSILIS 296 Query: 307 RVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKN--SIAEMKDAEIERS 364 + R + LV+ ++K+ EGD + IK+ ++ DA Sbjct: 297 VIVRSITKPLQVLVDA------------SVKVSEGDLSGHVIIKSQDEFQKLGDAYNHMI 344 Query: 365 NKLLSLISYDQESGFIKNMAI---------IESNNNQYLAVGIIKLCGLEAVEAVFGVDE 415 + L YD + S+ ++ I + + V G Sbjct: 345 DSLSKFAFYDPLTNLPNRRQFVFTLEQAITQASSEQSKFSIIFIDVDNFKQVNDTLGHSA 404 Query: 416 RNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTF-TRKIA--MVNDFDSSFGY 472 +++++K+ +++ + D +++L K+ + + F F Sbjct: 405 GDELLQKVAEQLQSSIGSEGVVARLGGDEFVILLEHRADHAYLEKMLSSLRDSFVQPFTI 464 Query: 473 RNL----RIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENI 528 ++ P+ G + +A+ ++ + F D+ + + Sbjct: 465 HGQITFVQMSLGIASYPIDGVTQEELLKHADIAMYKAKESGGNNHRFFDNKMNELVIKKN 524 Query: 529 WIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIG 588 I + IR A+ E+ + YQP ++ T + G EAL RW S E G +SP FI IAE G Sbjct: 525 QIEQMIRLALARNEINVHYQPQIEPATGKLRGFEALVRWKSPELGFVSPEDFIPIAEKTG 584 Query: 589 FINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLK 648 FI ++ ++ A + + FL+ +N+S QL F ++ I+ E LK Sbjct: 585 FITQIDEWVMYQACLKNVELQHQFGY--PFLMSVNISALQLERTDFVDKVQLILNETKLK 642 Query: 649 ANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVD 708 L +EITE+++ E + +L GV+I+ DDFGTG S+L + ++K+D Sbjct: 643 PEYLEIEITESILVESFESSICILRKLENLGVKIAQDDFGTGYSSLNYLSLLPIHTLKID 702 Query: 709 SQFTGDIFGTAGK--IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQK 766 ++ + I+ I LA V+AEGVE+++ L + C QGY + + Sbjct: 703 RSLIQNMTSATAEKTIIESIIQLAHKLGHDVVAEGVETKEQYILLKEWNCDFVQGYYFSR 762 Query: 767 PMPFS 771 P+ Sbjct: 763 PVSED 767 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 742 bits (1916), Expect = 0.0, Method: Composition-based stats. Identities = 127/614 (20%), Positives = 241/614 (39%), Gaps = 39/614 (6%) Query: 188 LLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNI 247 ++ V K D+ W ++ +N V + R + ++ I Sbjct: 291 VIGVKKESGDIIWTSVSAAPLSYDSNSCVTVTTDITKRKQFESELRVSATAFETQEGILI 350 Query: 248 IDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTR 307 D E + NA F Y + + +L L Sbjct: 351 TD-------ENNVMLRTNAAFTAITGYTNKEAIGQNPRL--LSSGRQNASFYSAMWKAIN 401 Query: 308 VFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKL 367 E+ P+ + A+K R G + + + + + K AE K+ Sbjct: 402 TTGVWEGEIWNRRKNGEIYPE-HLTVTAVKDRNGMVTNYVGVLSDLTQRKAAE----EKI 456 Query: 368 LSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNK 418 +L +D + +++ + AV I L +A+ +G + Sbjct: 457 ENLAFFDPLTKLPNRRLLLDRLKQAMASATRSVTNGAVLFIDLDNFKALNDTYGHPMGDL 516 Query: 419 IVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE------NVQTFTRKI--AMVNDFDSSF 470 +++++ +R+ + F D +++L + + + + + Sbjct: 517 LLQQVAKRLVSSVRDGDTVSRFGGDEFVVLLEGFDENPLDAASQAETVGEQIFAALRQPY 576 Query: 471 GYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEE 526 A + ++ ++ +A+ + + F D I + Sbjct: 577 LIGTHEYHGTSSIGATLFNDKQQSIDELMKQADIAMYQAKKEGRNVLRFFDPQMQETIAK 636 Query: 527 NIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAED 586 + ++R A+E + L YQ VD +R GAEAL RW E G++SP +FI +AE+ Sbjct: 637 RTALEGDLRKAIENHQFQLHYQIQVD-ESRHPFGAEALIRWFHPEHGMVSPDQFIPLAEE 695 Query: 587 IGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENG 646 I +GY +++TA + + A F+L +NVS Q + F + +++++ Sbjct: 696 SDLILPIGYWVLETACARIQRWQHDA-KTSGFVLSVNVSAKQFRQTDFVNQVQSLIQQYE 754 Query: 647 LKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIK 706 + + L +E+TE+++ E + L++ GV+ S+DDFGTG S+L+ + D +K Sbjct: 755 INPSLLKLELTESMLLDNIEDTIATMSALKELGVKFSLDDFGTGYSSLQYLKRLPLDQLK 814 Query: 707 VDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLY 764 +D F DI IVR I +A + VIAEGVE+E+ + L GC QGYL+ Sbjct: 815 IDQSFVRDIAVDASDRAIVRTIIAMAHSLDLDVIAEGVETEEQQKHLSSKGCKNFQGYLF 874 Query: 765 QKPMPFSAWDKSGK 778 KP+P ++ S + Sbjct: 875 GKPVPIEQFETSLR 888 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 741 bits (1914), Expect = 0.0, Method: Composition-based stats. Identities = 129/655 (19%), Positives = 243/655 (37%), Gaps = 48/655 (7%) Query: 155 DSNNSWNPAYNCFD---RPGKKCISFTLHI---NGKDHDLLAVDKIHVDLNWRYLNEYLD 208 P+Y F P + + D+DL + ++ W + Sbjct: 179 GQAPGCVPSYELFLSVVHPEDQALVEAAWRQAVARGDYDLTHRVIVGGEVRWVHERAEFR 238 Query: 209 QIS---ANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNN 265 + + A + ++ + Q R+ ++ + G II K + N Sbjct: 239 RAADGAALAGIGTVQDITDRKLAEQSLRQAATVFENTGEGVIIADA------KNRIIAVN 292 Query: 266 ALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAF 325 F + Y ++ S L L E+ Sbjct: 293 RAFTVITGYGPEEVIGRSPNL--LRSGRHDAAYYDAMWRGVHEAGHWQGEIWNRRKNGEI 350 Query: 326 LPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI 385 P+ + ++ G + + + I+ MK+ E +L L YD + + + Sbjct: 351 FPE-LLTLSVVRDHNGKVSHYVGVFSDISRMKETEA----RLQRLAHYDALTDLPNRVLL 405 Query: 386 IES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCD 436 + + LAV + + + V G ++++ ++ +R+ + Sbjct: 406 NLRLAHGVERVQRSGEMLAVLFLDIDRFKNVNDSLGHPVGDELLIEIARRLRSRIRAEDT 465 Query: 437 IVTFNADLYLLLCRE--NVQTFTR-KIAMVNDFDSSFGY-RNLRI----HKSAICEPLQG 488 + D +++L + +++ + SF + PL Sbjct: 466 LARLGGDEFVILLDRIRSANDVADFAQEIIDLLNQSFQLASGQEVFVGASIGISLYPLDT 525 Query: 489 ENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQ 548 ++A A+ ++ + + F E + + +R +E GE L +Q Sbjct: 526 DDATQLISNADAALYQAKEAGRNVYRFYTADLTRAAHERLGLEAALRRGLERGEFVLHFQ 585 Query: 549 PIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHF 608 P+V ++ ++GAEAL RW G+I+PL+FI +AE+ G I LG ++++A + R + Sbjct: 586 PVVALDKGEVVGAEALVRWNHPTEGMIAPLRFIPLAEETGLIVPLGEWVLESACRQGREW 645 Query: 609 SQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHF 668 + +N+S Q I+ G A L +EITE+ + + Sbjct: 646 LDCG---RPLTIAVNLSTRQFRAGDLTATVRDILDRTGFPAALLELEITESTVMEDADRA 702 Query: 669 YLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRII 726 + L+ GVR+SIDDFGTG S+L D++K+D F DI IV + Sbjct: 703 VATLAALKGLGVRLSIDDFGTGYSSLAYLKRFAVDALKIDRSFVRDIADDENDRMIVATV 762 Query: 727 FDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW----DKSG 777 +A R+ VIAEGVE+ + L LGC QGYL +P + + +++G Sbjct: 763 VAMAHQMRLGVIAEGVETAEQLAFLRSLGCEAYQGYLVGRPQAAADFLGAVERAG 817 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 739 bits (1910), Expect = 0.0, Method: Composition-based stats. Identities = 130/655 (19%), Positives = 238/655 (36%), Gaps = 44/655 (6%) Query: 143 NPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCIS--FTLHINGKDHDLLAVDKIHVDLNW 200 +P + W + + A + ++ D D Sbjct: 447 HPQLQRWRRIAAERGFKAAAALPLRSDGETYGVLCLVSVDPQAFDAD-----------EV 495 Query: 201 RYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTS 260 L E D I+ L + + +A R + I ++ N +I D Sbjct: 496 ELLAELADDIAFGIRTLRARVEQQQLAATLELRNRAIEEST--NAIVISHADRAADNPII 553 Query: 261 AVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELV 320 V N F + Y +L + + V + + R Sbjct: 554 YV--NPAFTVTTGYGADEVLGRNARFLIDNDWDQPAVERLREAVREGGDARVTLRTYHKD 611 Query: 321 NTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI 380 L + + +++ +G+ I+I N + E E E L ++D +G Sbjct: 612 ---GQLLWNEISLASIRDAQGEVSHFIAIFNDVTERVRYEAE----LEQQATHDALTGLA 664 Query: 381 KNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKY 431 + + + +AV ++ L + + G + ++++ +R++ Sbjct: 665 NRNLLNDRMQRAIIRAARDGHAVAVMLLDLDRFKLINDSLGHAAGDALLQETARRLSASV 724 Query: 432 AQCCDIVTFNADLYLLLCRE---NVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICE 484 + + D ++++ + ++ I Sbjct: 725 RRGDTVARLGGDEFMVVMSDMSAEDAAAALAAKVLESLAEPMLLNGREIVATGSIGVSLY 784 Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELF 544 P GE A + + +A+ ++ + F F I E + + ++R A+E EL Sbjct: 785 PRDGEAAATLLKHADVAMYRAKELGRNRFQFYAPEMNERILERLELENSLRRALENDELE 844 Query: 545 LVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGE 604 L YQP V + ++GAEAL RW + G++SP FI +AE+ G I +G ++ A + Sbjct: 845 LHYQPKVSLRDGRVIGAEALIRWRHPQLGMVSPADFIPLAEETGLIVPIGEWVVDHACRQ 904 Query: 605 FRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERI 664 R + + +NVS Q + + L L VE+TE+ + Sbjct: 905 LRAWLDAGL--PQISVAVNVSARQFQHEQLTHVLARALAAHRLPPGQLHVEVTESAVMCE 962 Query: 665 NEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKI 722 E + +L+ GVRIS+DDFGTG +L DSIK+D F D+ I Sbjct: 963 PERTIFTLRELKNIGVRISLDDFGTGYCSLNYLKRFPIDSIKIDRCFVTDLATSAEDAAI 1022 Query: 723 VRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 +I LA VIAEGVE+E L + GC + QG+L+ +P+P + + + Sbjct: 1023 ALMIVSLAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGFLFSRPLPAAEFARLL 1077 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 739 bits (1908), Expect = 0.0, Method: Composition-based stats. Identities = 113/557 (20%), Positives = 209/557 (37%), Gaps = 28/557 (5%) Query: 240 NSEGNYNIIDSVDTEY-IEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVL 298 + N S + V N F Y + + + L Sbjct: 317 HLYANVFTNASEGMAITDAQARIVAVNPAFTDITGYSIEEIHGRTPAV--LASGRQDAAF 374 Query: 299 LVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKD 358 T + E+ + P+ I A+ +G I I + I + K+ Sbjct: 375 YREMWATLGKRGQWQGEIWNRRRSGEIYPEWL-SITAITEGDGGVSHYIGIFSDITDRKE 433 Query: 359 AEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEA 409 +E ++ L +D +G + + + N+ AV + L + + Sbjct: 434 SEA----RIRHLAHHDALTGLPNRLLLQDRLGQAILKARRNSTQAAVLFLDLDRFKTIND 489 Query: 410 VFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE---NVQTFTRKIAMVNDF 466 G + + ++R++ QR + + D ++++ + T ++ Sbjct: 490 TLGHEIGDGLLRQVTQRCLGAVRETDTVARQGGDEFVIVLPDLEHGQDAGTIARKILAAL 549 Query: 467 DSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLN 522 + P G + A+ + + F F Sbjct: 550 TEPCRLGPHELTVTGSIGIALYPGDGADPSMLLRNADAAMYRAKADGRNGFQFYAADMNT 609 Query: 523 EIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFIT 582 + + +R A++ EL L +QP V+ I G EAL RW + G+++P +F+ Sbjct: 610 HSLGELLLEHQLRGALDRNELRLYFQPKVNAADGCIEGCEALLRWQHPDLGLLAPGRFVP 669 Query: 583 IAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIM 642 AE+ G I +G +++ A + R + + +N+S Q + Sbjct: 670 AAEESGLIVPIGEWVLREACRQLRAWIDAGL--APVPVAVNLSGQQFAHQDIVALVREAL 727 Query: 643 KENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINP 702 E+ L A L +E+TET++ R E + +LR GV ++IDDFGTG S+L + + Sbjct: 728 AEHRLPAPMLELELTETMLMRDLERTIATLAELRAMGVTLAIDDFGTGYSSLAYLRQFDV 787 Query: 703 DSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQ 760 +++K+D F DI + GKI + LA + V AEGVE+ L + GC Q Q Sbjct: 788 NALKIDRSFVHDIRPGSSDGKIATAVIALAHNLGLTVTAEGVETAAQQHFLARHGCDQLQ 847 Query: 761 GYLYQKPMPFSAWDKSG 777 G+L+ +P P A+ + Sbjct: 848 GFLFGQPEPAEAFAQRL 864 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 738 bits (1906), Expect = 0.0, Method: Composition-based stats. Identities = 120/610 (19%), Positives = 227/610 (37%), Gaps = 45/610 (7%) Query: 188 LLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKN--QLAREKLIIYNSEGNY 245 L+ I + Y++E + DE L L Q + +A + E +II ++EG Sbjct: 245 LVGFADIMASIEHEYVHELQYALKERDEALNLSQQNLRLADKVFEATLEGIIITDAEGII 304 Query: 246 NIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMT 305 + N F + ++ + ++ L + + Sbjct: 305 ETV----------------NPAFTRITGWRREEVVGKNPRI--LSSSQQPPEFYRHLWQS 346 Query: 306 TRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSN 365 R E+ F + I ++ +G I + I + K E Sbjct: 347 LREHGFWQGEVINRRKDGKFYTE-HLTITGIRGPDGTFTHYAGIFSDITQRKLNE----E 401 Query: 366 KLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDER 416 +L L ++D + ++E + +A+ + L + + G Sbjct: 402 RLHYLANHDPLTDLPNRTLLMERLGAALTRAHRQGKRVALMFLDLDRFKFINDTLGHAVG 461 Query: 417 NKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQ---TFTRKIAMVNDFDSSFGYR 473 +K+++ + R+ + D + ++ + +++ Sbjct: 462 DKLLQTVASRLTGSLRASDTVARLGGDEFNIVLEDIRDLRGVAQTAQKLIDRVQGMVTLD 521 Query: 474 NLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIW 529 + P G A+ ++ + F F + Sbjct: 522 GHDVYVTASVGIAIYPDDGSTPEVLRMNADTAMYRAKERGKNNFQFFTADMNASTLARLR 581 Query: 530 IARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGF 589 + N+ A+ E L +QP VD+ I G EAL RW S E G +SP FI IAE+ Sbjct: 582 LESNLHRALARQEFQLHFQPKVDLAHGHIYGMEALLRWRSHELGPVSPADFIPIAEESNL 641 Query: 590 INELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKA 649 I+ +G +++ A + RH+ L + +N+S Q+ + I++ + L Sbjct: 642 ISTIGEWVLEQACRQARHWLNLGLL--PGTVAVNLSSKQMTQGDIVATVRRILEHSNLPG 699 Query: 650 NSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDS 709 + L +EITE+V ++ L+ GVRI+IDDFGTG S+L ++ D +K+D Sbjct: 700 HYLELEITESVAMDNTGEMIRTLKNLKALGVRIAIDDFGTGYSSLSYLKQLPIDVLKIDR 759 Query: 710 QFTGDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKP 767 F D+ I I + + + +AEGVE E+ + L+ GC QGYL+ +P Sbjct: 760 SFVTDLHEDRDDAAIASAIISMGQSLNLQPVAEGVEREEHRQFLLDHGCQYGQGYLFSRP 819 Query: 768 MPFSAWDKSG 777 +P + ++ Sbjct: 820 VPAATMEQLL 829 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 738 bits (1905), Expect = 0.0, Method: Composition-based stats. Identities = 137/699 (19%), Positives = 249/699 (35%), Gaps = 36/699 (5%) Query: 96 DSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDD 155 D V + + + IV + + + D + P + Sbjct: 351 DIVEYGQMNLVWVGLVDKKTQDIVPVASAGEHQDYLKGLYINVLPDHPAGQGPAGQVVRE 410 Query: 156 SNNSWNP--AYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISAN 213 + W + + +K I + L + + + + L+ + + Sbjct: 411 NKPIWMQDFLHEPAMKHWQKHIEHFKWRSSAILPLHRNGNVIGVM--FFYSNVLNAFTES 468 Query: 214 DEVLFLK--QGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKT-SAVPNNALFEI 270 + L L+ + + ++ E+L + S ++ V N+ F Sbjct: 469 SQRLLLELVEDIDFALEHFEKEEQLQLS---AQIFAQSSEGIMLLDPNCHIVMVNSAFTH 525 Query: 271 YFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDST 330 Y L + K+ L R E+ + P+ Sbjct: 526 ITGYSEEETLGRNPKM--LASGQHDRNFYATMWEAIETEGRWQGEVWNRRKDGSLYPEWL 583 Query: 331 DQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII---- 386 I+ ++ G I + E K+ E ++ L +D +G + Sbjct: 584 L-IQTMRDSRGTLTHYIGTFTDLTERKETE----ERVQWLAHFDPLTGLPNRTLLHIRSN 638 Query: 387 -----ESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFN 441 ++ LA+ + L + V G ++++++ QR+ + I Sbjct: 639 LAISLAQRRHEPLALMFLDLDNFKNVNDSLGHGVGDELLKQFSQRLVNAVREQDTISRLG 698 Query: 442 ADLYLLLCRENVQTFTR--KIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYA 495 D ++L+ ++N + I P G + + Sbjct: 699 GDEFVLVLPGTDTDGAAYLAERLLNIAARQYNIERHEINLTVSIGIAMYPTDGTDFDTLW 758 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 A+ + +++ F + I +R A+E + LVYQP + +NT Sbjct: 759 RSADAAMYRAKQSGRNDYCFFTTEMQARSARTLQIDNALRRALERNQFSLVYQPQLSLNT 818 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 I+G EAL RW + G P +FI IAE G I +G ++KTA+ + R + Sbjct: 819 NRIVGFEALIRWTHPQFGNTPPDEFIPIAESNGQIIPIGEWVLKTAVRQLRLWQDNGL-- 876 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 D + +N+S Q P E I++E G+ L +E+TE V I++L Sbjct: 877 KDVTISVNLSAVQFRHPRLPELVMAILEEAGVSPECLQLELTEGVAMENPLAAITVIDEL 936 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYN 733 RK+G+RISIDDFGTG S+L N S+K+D F D+ IV + LA Sbjct: 937 RKKGIRISIDDFGTGYSSLTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVSAVISLADSL 996 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 + +AEGVE+++ L GC + QGY +P+ A Sbjct: 997 GMITVAEGVETKEQLEFLRSRGCTEIQGYYLSRPLQADA 1035 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 737 bits (1904), Expect = 0.0, Method: Composition-based stats. Identities = 139/785 (17%), Positives = 268/785 (34%), Gaps = 53/785 (6%) Query: 26 LFFIINYQLVSERAVKRADSRFELIQKNVGYFFKDIERSALTLKDSL-------YLLKNT 78 L + +LV + +RF+ + F R A + + + + Sbjct: 53 LLGYVAAELVGKSIEDLVPNRFKASHPVLRSEFTASPR-ARRMGNGMAVKARRKDGSECD 111 Query: 79 EEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLVDESGRVI 138 ++ + I E M F ++ + + + RR N + Q G + ++ + Sbjct: 112 VDVSLSRIETDEGMFFASALRDISERKRKEEELRRQNGVLSTIFQSFPGGITLFDADLRL 171 Query: 139 FA---DFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIH 195 A F V + + G+ H Sbjct: 172 VAFNDQFKALLDLPDVLFEQPEPDFETLIRYNAARGEYGPGDPEQQVAAIIARTKKFVPH 231 Query: 196 VDLNWRYLNEYLDQISAN---DEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVD 252 R L L + +++ II + Sbjct: 232 KIERVRPDGTSLSIRGVPLASGGFLSIYTDITDRKQSEEQLRIAAAAFESQTCMIITDAN 291 Query: 253 TEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQ 312 N F Y + + +L L T Sbjct: 292 RVIQR------VNRAFIETTGYSAEEAVGQTPRL--LQSGRHGADFYREMWETIHRTGAW 343 Query: 313 FSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLIS 372 E+ P I A+ G I N I E K AE ++ +L Sbjct: 344 QGEIWGRRKNGEVYPKWL-SISAVVGTNGRVSHYIGTHNDITERKKAE----ERINALAF 398 Query: 373 YDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKL 423 +DQ +G +++ ++ + A+ I L + + G D +++++++ Sbjct: 399 FDQLTGLPNRTLLLDRLKQTILSSGRSDSHGALLFIDLDNFKTLNDTLGHDVGDQLLKQV 458 Query: 424 CQRIAEKYAQCCDIVTFNADLYLLLCRE--------NVQTFTRKIAMVNDFDSSFGYRNL 475 R+ + D ++++ T T ++ + ++ ++ Sbjct: 459 ALRLTHCVRDGDTVARLGGDEFVVVLANLNTNDKEAAQDTETVAEKILATLNQTYQLGHV 518 Query: 476 RIHKSAICEPLQGENA----WSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIA 531 H SA + ++ L++ + + F D + ++ + Sbjct: 519 THHSSASIGATLFKGPLIPIDDLMKQADLSMYKAKAAGRNAVRFFDPSMEIAVKVRAEME 578 Query: 532 RNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFIN 591 ++ A+ + L YQ + + GAE L RW +RG++SP +FI +AE+ G I Sbjct: 579 DDLLRALAEKQFLLHYQAQ--MVGERLTGAEVLLRWQHPQRGMVSPAEFIPLAEETGLIL 636 Query: 592 ELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANS 651 LG+ +++TA + ++ R L +NVS Q + F ++ ++++ G Sbjct: 637 PLGHWVLETACTQLAQWAGR-PEVAHLTLAVNVSAHQFRQNDFVDQVLGVLEKTGANPQR 695 Query: 652 LCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQF 711 L +E+TE+++ E + L+ +GV S+DDFGTG S+L + D +K+D F Sbjct: 696 LKLELTESLLVENVEDIIDKMAALKHRGVGFSLDDFGTGYSSLSYLKRLPLDHLKIDQSF 755 Query: 712 TGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 D+ I R I LA + VIAEGVE+E L GC QGY + +P+P Sbjct: 756 VRDVLTDSNDASIARTIVALANSLGLGVIAEGVETEAQRDFLASSGCHTYQGYYFSRPLP 815 Query: 770 FSAWD 774 ++ Sbjct: 816 IEDFE 820 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 737 bits (1904), Expect = 0.0, Method: Composition-based stats. Identities = 134/619 (21%), Positives = 235/619 (37%), Gaps = 31/619 (5%) Query: 181 INGKDHDLLAV-DKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIY 239 G D D++ V + + + E +S V + H Q A L + Sbjct: 291 PMGDDKDVIGVFNVYASEPDAFDAQEVALLVSLAQRVTVEIRAHRDRHGRQAAEAALRLR 350 Query: 240 NSEGNYNIIDSVDTEYIEKTSAVP-NNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVL 298 + + + A+ N FE Y + S Sbjct: 351 ERAIECSANAVIISSAQVPEFAIEYVNPAFERITGYTAAEAIGRSSSFL---LRNDHEQA 407 Query: 299 LVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKD 358 + + +R+ + L + I +K EG ++ + I MK Sbjct: 408 GLYEIRAALAEKREGKAVLRNYRKNGSLFWNDLYIAPVKDDEGKTTHFVAAMSDITPMKQ 467 Query: 359 AEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEA 409 E L L S+D +G + + N + V ++ L + V Sbjct: 468 YETT----LHRLASHDVLTGLPNRALLQDRLENAIAYSARNGHAVWVVLVDLDRFKFVND 523 Query: 410 VFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQ-----TFTRKIAMVN 464 G + +++ + R+ + + D ++L+ E + ++ Sbjct: 524 TMGHQAGDVLLKIISDRLQASVRESDTVARLGGDEFVLVLPECGDGPSGYSSDVIQRIME 583 Query: 465 DFDSSFGYRNLR----IHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAK 520 + P G + + +A+ ++ + F F A Sbjct: 584 AVVKPLTIQGSEFFLSCSMGIAVYPNDGADPTTLLAHADVAMYRSKELGRNNFQFYTPAM 643 Query: 521 LNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKF 580 ++ E + I +RHA+E+ EL L YQP VD++T AI+G EAL RW G++ P F Sbjct: 644 NDQALERLRIEGELRHAIELNELVLHYQPQVDLHTGAIVGLEALVRWNHPILGMVQPGSF 703 Query: 581 ITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTT 640 I++AE+ G I +G +++TA + + + + +N+S Q + E Sbjct: 704 ISLAEETGLIIPIGAWVLQTACRQAKAWQDMGFT--QLRIAVNLSARQFTQASLLESIKD 761 Query: 641 IMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEI 700 ++E GL+A L +E+TE+ + E L + L+ GV++S+DDFGTG S+L Sbjct: 762 TLQETGLEARFLEIELTESSVMADIERNILTLRDLKSLGVQLSVDDFGTGHSSLAYLKRF 821 Query: 701 NPDSIKVDSQFTGD--IFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQ 758 D++K+D F D I IV I LA ++ VIAEGVE+ L GC + Sbjct: 822 PIDTLKIDRSFVRDIAINQDDASIVSSIISLAHNLKLNVIAEGVETASQMDILRAQGCNE 881 Query: 759 AQGYLYQKPMPFSAWDKSG 777 QGY + KP+P + Sbjct: 882 IQGYYFCKPLPSDQIETLL 900 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 736 bits (1900), Expect = 0.0, Method: Composition-based stats. Identities = 101/537 (18%), Positives = 199/537 (37%), Gaps = 28/537 (5%) Query: 261 AVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELV 320 + N F Y + + +L L E+ + Sbjct: 868 ILEVNDAFCRLTGYAADEVRGSDPRL--LSSGRTSAEEYRTMWQAINSTGHWQGEVWDRR 925 Query: 321 NTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI 380 ++ P I ++ EG+ + I I+E K AE K+ L +D + Sbjct: 926 KDGSYYPKWL-SISTIRGAEGNTEYYIGSFVDISERKAAE----EKISHLAHFDTLTDLP 980 Query: 381 KN---------MAIIESN--NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAE 429 + + +AV + L + + G + ++ ++ R+ Sbjct: 981 NRSNLQGRLDQALASARREGHGRSVAVMFLDLDRFKNINDTLGHHVGDALLLEVAARLRS 1040 Query: 430 KYAQCCDIVTFNADLYLLLCRENVQTFTRKI--AMVNDFDSSFGYRNLRI----HKSAIC 483 + D ++++ ++ ++ ++ + Sbjct: 1041 SVRDSDVVARLGGDEFVVVLTGADALAAERVAGKILKALSRAYQIEGHALHSTSSIGIAV 1100 Query: 484 EPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGEL 543 P GE+ + A+ + + F + + + ++ A++ + Sbjct: 1101 FPADGESVEVLMQNADAAMYHAKSAGRNNVQFFTASMNEAASDRRQLEEDLHLALQQKQF 1160 Query: 544 FLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMG 603 L YQP VD R + EAL RW G++ P +F+ +AED G I +G +++TA Sbjct: 1161 VLHYQPQVDAQ-RRVFAVEALLRWQHPHHGLVPPARFVPLAEDTGLIVPIGQWVLETACA 1219 Query: 604 EFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIER 663 + + +S A + +NVS Q +P F E + +G L +E+TE+++ Sbjct: 1220 QIKAWSVDA-RTRKLQVAVNVSARQFRQPDFVELLRQAIDNSGANPARLKLELTESLVLD 1278 Query: 664 INEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGK 721 + ++ GV S+DDFGTG S+L + D +K+D F + Sbjct: 1279 NVADTIDKMNAIKLLGVTFSMDDFGTGYSSLSYLTRLPLDQLKIDRAFVCRLPENRSDAV 1338 Query: 722 IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 I + I + R + V+AEGVE+E + L GC QG+L+ +P+ A++ + Sbjct: 1339 IAQTIVTMGRSLGLKVVAEGVETEAQRQFLDSHGCDGYQGFLFSRPLAVDAFEDFLQ 1395 Score = 53.1 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 12/143 (8%), Positives = 28/143 (19%), Gaps = 20/143 (13%) Query: 265 NALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLA 324 N F Y + + ++ L T + Sbjct: 621 NPSFTRVTGYSRLEAIGQNPRI--LQSGEAPSDTYRSLWQTLLEGKVWTGLFHNRRKNGE 678 Query: 325 FLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMA 384 + I + G+ +++K + E A+ Sbjct: 679 LFWEK-ASIAPIIGDHGEVTHYLAVKEDVTERLRADKLLQESEE--AF---------RRL 726 Query: 385 IIESNNNQYLAVG----IIKLCG 403 ++ L + I Sbjct: 727 FEDA--KDPLLLLKDGSFIDCNR 747 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 735 bits (1898), Expect = 0.0, Method: Composition-based stats. Identities = 108/461 (23%), Positives = 191/461 (41%), Gaps = 23/461 (4%) Query: 335 ALKIREGDAKEIISIKNSIAEMKDAEIERSN---KLLSLISYDQESGFIKNMAIIES--- 388 L+ +EG + +I I+E K AE +L + +D + + Sbjct: 289 PLRGKEGKVFGVCTIGTDISERKLAENALREQQSRLNYMAFHDALTSLPNRSLFYDRIYH 348 Query: 389 ------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 +N +A+ ++ + + V G D + +++ + R+ E + Sbjct: 349 GLARARRSNSRVALMLLDIDRFKIVNDSLGHDAGDILLKAIAMRLTEGVRDMDTVARLGG 408 Query: 443 DLYLLLCR---ENVQTFTRKIAMVNDFDSSFGYRNLRIH----KSAICEPLQGENAWSYA 495 D ++++ + ++ I P G + Sbjct: 409 DEFVVVLEGIHDVDDVIFVANKLLATLSRPLDISGHSISATVSIGVSIFPEDGADTDELL 468 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 + +A+ ++ + F + + ++R A+E +L L YQP +D+ T Sbjct: 469 KNADIAMYKAKEAGKNNCQFYTKGMNATAVNYLLLENDLRRAIEQNQLALYYQPQIDLKT 528 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 + G EAL RW ERG++SP FI +AE+ G I +G +++ A + + + Sbjct: 529 GDMTGVEALVRWQHPERGLVSPAHFIPLAEETGLIVPIGEWVLREACKQKKIWLDTGKNV 588 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 + +N+SP Q + +F + I++E GL+A L +EITE+ + QL Sbjct: 589 G--KVAVNLSPRQFRQKNFPGKVEAILQETGLEAKYLELEITESCAMEHAGETINQLNQL 646 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYN 733 + G ++IDDFGTG S+L +K+D F DI I + I LA Sbjct: 647 NQMGTFLAIDDFGTGYSSLAYLQRFPIQKLKIDRSFIHDIHDDANDAAIAKTIIGLAHNM 706 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 ++ V+AEGVE+E A L GC Q QG+LY KPM + Sbjct: 707 QLRVVAEGVETESQAEWLRAKGCDQVQGFLYAKPMTAKQLE 747 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 734 bits (1896), Expect = 0.0, Method: Composition-based stats. Identities = 113/570 (19%), Positives = 222/570 (38%), Gaps = 34/570 (5%) Query: 224 EIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNAS 283 + + + ++ ++ S +I + + V N + Y +L + Sbjct: 558 QKVYAAESLKQAAAVFESTREGVVITDL------QPRIVAINRAYAEITGYSEEQVLGKN 611 Query: 284 DKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDA 343 ++ + + E+ + P I + + Sbjct: 612 PRIIK--SGRHDKLFYQAMWASLTKAGYWRGEVWNRRRSGDIYPQWL-TISTVFNDRNEP 668 Query: 344 KEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYL 394 + + I ++K +E +L L YD +G + + + + Sbjct: 669 CNYVGVFTDITQIKQSEA----RLAHLAHYDALTGLPNRLLVQSRLHHAIERTLRHGNQI 724 Query: 395 AVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE--- 451 A + L + V G ++++ L R+ ++ + + D +L++ + Sbjct: 725 AALYLDLDRFKNVNDSLGHPIGDELLVMLALRLKKRLREEDTLARLGGDEFLVVLEDIKD 784 Query: 452 NVQTFTRKIAMVNDFDSSFGY-RNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIR 506 + + +++ + F I P + + +A+ + Sbjct: 785 SNEPAMVAQTLIDLLATPFSLPSGHEIFINTSIGISLFPTDANSVTELIQHADMAMYLAK 844 Query: 507 DHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCR 566 + + + DA E + + +R A+ GE L YQP++D ++G EAL R Sbjct: 845 QEGRNTYRYHTDALSIAANERLVLETQLRQALSAGEFVLHYQPLIDARKGQVMGVEALVR 904 Query: 567 WVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSP 626 W ++ ++SP KFI IAE+ G I LG +++TA + R + ++ +N+S Sbjct: 905 WQPPDKAMVSPGKFIPIAEETGLIVPLGEWVLRTACAQGRAWMDA--DFPPLVMAVNLSV 962 Query: 627 WQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDD 686 Q + E +++E L A L +E+TE++ E ++ L+ GVR+SIDD Sbjct: 963 RQFQSENLVELIRQVLEETKLPAACLELELTESMFMEHAEQSIEILKTLKSLGVRLSIDD 1022 Query: 687 FGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVES 744 FGTG S+L D +K+D F + +I I +AR ++ V+AEGVES Sbjct: 1023 FGTGYSSLTYLKRFPIDKLKIDQSFVHGLAYDPNDREIAATIIAMARNLKLDVLAEGVES 1082 Query: 745 EDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 E L + GC QGYL+ +P+P + Sbjct: 1083 EQQLDILNQHGCDYYQGYLFHRPVPAQELE 1112 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 734 bits (1896), Expect = 0.0, Method: Composition-based stats. Identities = 124/591 (20%), Positives = 234/591 (39%), Gaps = 37/591 (6%) Query: 208 DQISANDEVLFLKQGHEIIAKNQLAR-EKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNA 266 D+ E+ + + + ++++ +I D +E N Sbjct: 472 DRFGKPQELFGVMLDITDRKAAEESLNLSKQVFDNTSEAILIADRDRNILE------VNQ 525 Query: 267 LFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFL 326 + Y + + YL + + + E+ + + Sbjct: 526 AYLDMTGYGREDCVGT-----YLALLDEPAGGGQLIGNLVQQHGKWMGELLAQKRSGEYY 580 Query: 327 PDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII 386 P I + G + + + I++ K AE +L L ++D +G + Sbjct: 581 PAWV-SISTVHDNHGSLQNYVVVLTDISQRKQAE----ERLQFLATHDGLTGLPNRTLLQ 635 Query: 387 ES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDI 437 E Q + V I L + + G + +++++ R+ E Q I Sbjct: 636 ERMELAVLRAQRYQQCVGVLFIDLDRFKIINDTLGHQAGDVLLQEVAGRLGECLRQTDTI 695 Query: 438 VTFNADLYLLLCRENVQT---FTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGEN 490 D +++L + ++ +++ F + P G + Sbjct: 696 ARQGGDEFVVLVEDFIEQQYLVNVARKIMHALAQPFILMQQELYISASIGISVYPDDGVD 755 Query: 491 AWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPI 550 S + +A+ +D + F F + + ++R A+E E L+YQ Sbjct: 756 ISSLLKNADMAMYRAKDDGKNTFHFYSADGNANSVSRLTLENSLRRALERNEFSLLYQAK 815 Query: 551 VDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQ 610 +D+ + I+GAEAL RW SAE G++SP FI +AE+ G I E+G +++ A + H+ + Sbjct: 816 LDLAEQNIIGAEALIRWHSAELGMVSPQDFIPVAEETGMIIEIGEWVLQQACRDACHWQE 875 Query: 611 RASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYL 670 + +N+S Q E ++ + ++E+GL N L +EITE++I + E Sbjct: 876 --VAGRPIRVGVNISARQFREDSLYQAISNALEESGLTPNCLELEITESMIMQNAERASQ 933 Query: 671 NIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFD 728 ++ R G + IDDFGTG S+L DS+K+D F DI + I + I Sbjct: 934 MLQHFRNLGSYVLIDDFGTGYSSLGYLKHFPIDSLKIDRSFVRDIPQDSDDMAITQAIIA 993 Query: 729 LARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKL 779 +A +I V+AEGVE++ L GC Q QGY++ +P+ + + Sbjct: 994 MAHSLKINVVAEGVETQAQLEFLRGQGCDQLQGYIFSRPLVVEDFVGLLRF 1044 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 734 bits (1896), Expect = 0.0, Method: Composition-based stats. Identities = 100/457 (21%), Positives = 189/457 (41%), Gaps = 25/457 (5%) Query: 337 KIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES-------- 388 ++ E + ++ +AE AE ++ + YD +G + Sbjct: 166 RLMEDLRRHAAMLEEEVAERSRAE----ERIRQMAYYDSLTGLPNRRLFNDRLRQSLALA 221 Query: 389 -NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYA-QCCDIVTFNADLYL 446 + + LAV + L + + G ++++ + +R+ + + D ++ Sbjct: 222 QRHKRPLAVMFLDLDRFKLINDTLGHAVGDRLLMAVAKRLRNCCRREGDTVARQGGDEFI 281 Query: 447 LLCR---ENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLK 499 + + FT +++ F + F + P G + + + Sbjct: 282 INLSAISDVKDAFTVAQKIIDVFRTPFVIDGYELFITTSIGISVYPHDGRSGDALVKNAD 341 Query: 500 LAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAIL 559 +A+ ++ + E + + ++R A+E E L YQP V++ I Sbjct: 342 VAMYRAKEQGRNNCQLFAPEMNARAFERLSLENDMRRALERDEFVLHYQPKVNVEHGQIA 401 Query: 560 GAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFL 619 EAL RW G++ P +FI +AE+ G I LG +++TA + R + Sbjct: 402 CMEALVRWQHPSMGLVPPSRFIPLAEETGLIVPLGEWVLRTACQQNRAWQDAGY--PTMQ 459 Query: 620 LHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQG 679 + +N+SP QL + E ++ E GL L +E+TE+++ E +L + G Sbjct: 460 VAVNLSPRQLRQGDLSETVARVLAETGLAPGWLVIEVTESILMDDAEETIRTFRRLDRMG 519 Query: 680 VRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNRIPV 737 VRISIDDFGTG S+L + ++K+D F +I I + +A+ + V Sbjct: 520 VRISIDDFGTGYSSLHYLKKFPVHTLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLGV 579 Query: 738 IAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 +AEGVE+ + L L C QG+L+ +P P + Sbjct: 580 VAEGVETVEQMEVLRALNCRYMQGFLFSEPAPAEQFT 616 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 734 bits (1896), Expect = 0.0, Method: Composition-based stats. Identities = 106/527 (20%), Positives = 199/527 (37%), Gaps = 26/527 (4%) Query: 265 NALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLA 324 N F Y ++ + ++ + + + E+ Sbjct: 774 NDAFVKTTGYTLPEVMGKNPRILHSGKTT--VETYAAMWTQLNSGQMWRGELINRRKDGT 831 Query: 325 FLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMA 384 + +I L+ +G +SIK I E K E ++ L +D +G Sbjct: 832 EYVE-LARISPLRHTDGRVTNYLSIKEDITEQKQVEA----RIRQLAHFDLLTGLPNQTL 886 Query: 385 IIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCC 435 + + + +LAV + + + + G ++++ L +R+ Sbjct: 887 LKDRAGFAMQMAQRSAHHLAVLFLDIDHFKNINDTLGHRIGDELLVHLAKRMKLLLRDED 946 Query: 436 DIVTFNADLYLLLCRENVQTFTR--KIAMVNDFDSSFGYRNLRI----HKSAICEPLQGE 489 + F D ++L+ + ++ + + P G Sbjct: 947 TLSRFGGDEFILVLPDTDADGAAHVAEKILETVAKTCYIEQHELVVTPSIGIAMYPSDGM 1006 Query: 490 NAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQP 549 + + +A+ + + F F + + +R A+ + L YQP Sbjct: 1007 DFDKLYQSADVAMYRAKQDGRNNFRFFTSEMQARSARRLLLENALRQALSRNQFELHYQP 1066 Query: 550 IVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFS 609 + + I+GAEAL RW E G ISP +FI +AE+ G I +G +++TA+ + + + Sbjct: 1067 QISMQDGKIVGAEALLRWYHPELGSISPAEFIPVAEESGLILSIGEWVLRTAVQQVKRWQ 1126 Query: 610 QRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFY 669 + IN+S Q + E I+ E L + + +E+TE+V Sbjct: 1127 DAG--HPPVTVAINLSAVQFRQARLSELVMQILHEANLAPHWIELELTESVAMDNPLVAI 1184 Query: 670 LNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIF 727 + L G+R+SIDDFGTG S+L + + +K+D F D+ + IV I Sbjct: 1185 GVMNDLHGCGIRMSIDDFGTGYSSLSYLRKFKVNKLKIDQSFVRDLADDIESRAIVTAII 1244 Query: 728 DLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 LA IAEGVE+ L GC + QGY + +P+ + ++ Sbjct: 1245 TLASSMGFQTIAEGVETAGQLAFLRLQGCNEVQGYYFSRPLTVALFE 1291 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 733 bits (1894), Expect = 0.0, Method: Composition-based stats. Identities = 140/722 (19%), Positives = 260/722 (36%), Gaps = 62/722 (8%) Query: 92 MPFLDSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLVDESGRVIF------------ 139 F+ + + + R + D+ ++G L+ +SG F Sbjct: 646 GEFVVVSEDITERKQAETALRDSEDRFRSIFNNAIDGILLADSGTRKFIMGNSAIARMLG 705 Query: 140 -ADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDL 198 ++ + + + + A G+ +S + KD + D L Sbjct: 706 YSNEELLQLGTEDIHPEQDKEYYIAQFAMMVRGESTLSSNAVVKRKDGSVFYADIKASPL 765 Query: 199 NW---RYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEY 255 YL + I+ E R+ ++ S N II +D Sbjct: 766 RIGDKVYLMGFFRDIT------------ERKQTEDALRQGAAVFESSHNGIIITDLDG-- 811 Query: 256 IEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSE 315 + N + Y LL + ++ L + E Sbjct: 812 ----HILAANQAYADISGYTESELLGQNPRI--LNSGRQSRDFYRKMWANIKEAGSWQGE 865 Query: 316 MTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQ 375 + P + A++ +G A + I + +++++ E ER L YD Sbjct: 866 LWNRRKNGEIYPTWL-AVSAVRNDQGKATHYVGISSDLSQLRQTEAER----EHLAHYDP 920 Query: 376 ESGFIKNMAII---------ESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQR 426 + + + ++ + V + L + + G ++++ L +R Sbjct: 921 LTDLPNRLLLRSHLTHALAQAKRHHNQVGVLYLDLDRFKNINDSLGYQVGDELLVTLTER 980 Query: 427 IAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKI---AMVNDFDSSFGYRN-----LRIH 478 + + D +LL+ + I +++ F + Sbjct: 981 LTMHMRSEDLLARLGGDEFLLVLEHINEPEDSAIVARSLLETLAQPFVLHGEREIFIGAS 1040 Query: 479 KSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAM 538 P G++A + A+ + + + F + E++ + +RHA+ Sbjct: 1041 IGISIFPNDGDSAEQLIQHADAAMHQAKTLGRNTYHFYTEDLSRASNEHLELENRLRHAI 1100 Query: 539 EIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQII 598 +L + YQP VDI T I+GAEAL RW ERG++ P +FI +AE+ G I +G ++ Sbjct: 1101 TANQLRVYYQPQVDIATGHIIGAEALVRWQDPERGLVQPGQFIPLAEETGLIGAIGEWVL 1160 Query: 599 KTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITE 658 K + + L +N+SP Q + + ++ E G A+ L +E+TE Sbjct: 1161 KETCLQGMRWIDAGL--PFLTLAVNLSPHQFLRGNIAGLISKVLAETGFPADRLELELTE 1218 Query: 659 TVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF-- 716 + + + E + LR Q +R++IDDFGTG S+L D +K+D F DI Sbjct: 1219 SALMQQGEDVIKMLHLLRAQDIRLAIDDFGTGYSSLSYLKRFPLDILKIDKSFVDDIPFH 1278 Query: 717 GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKS 776 +I I + V+AEGVE+ + L GC QGYL P+P ++K Sbjct: 1279 QDDMEIAATIIAMGHILGFKVLAEGVETREQLEFLQARGCDLYQGYLTSPPIPAEEFEKL 1338 Query: 777 GK 778 K Sbjct: 1339 LK 1340 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 732 bits (1890), Expect = 0.0, Method: Composition-based stats. Identities = 114/596 (19%), Positives = 217/596 (36%), Gaps = 40/596 (6%) Query: 209 QISANDEVLFLKQGHEIIAKNQLA----REKLIIYNSEGNYNIIDSVDTEYIEKTSAVPN 264 + N + + + I + R I+ G +I + Sbjct: 631 RYGKNGDPIASCGTVQDITARKKQEDALRLYASIFEHSGEAILIADQ------ARHIIAV 684 Query: 265 NALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLA 324 N F Y ++ + A + E+ + Sbjct: 685 NPAFTNLTGYALDDIRGEEPTILAGGQASEES--YRSTWASLEQTGYWQGEIIDRRKDGT 742 Query: 325 FLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKN-- 382 P + ++ +G ++ I E K AE ++ L +D +G Sbjct: 743 LYPKW-MAVSVVRDADGVLTHYVASFTDITERKLAEA----QIKHLAYHDPLTGLSNRFS 797 Query: 383 -------MAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCC 435 + + LAV + L +++ G ++++ ++ +R+ + Sbjct: 798 LQTQLDQTLALARREQRTLAVVFLDLDRFKSINDSLGHALGDQLLVEVARRLRDNVRDSD 857 Query: 436 DIVTFNADLYLLLCRENVQTFTRK---IAMVNDFDSSFGYRNL----RIHKSAICEPLQG 488 + D ++++ E ++ + P G Sbjct: 858 IVARLGGDEFVVVLTEVGDAAGAARVADKLLGALVPRYRIGGHALHTTASIGISLYPHDG 917 Query: 489 ENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQ 548 ++A + + A+ + F + + + ++R A+E G+ L YQ Sbjct: 918 DDADALMKNADTAMYHAKSQGRDNVQFFTPEMNQSVLKRLQFDHDLRVAVEAGQFELHYQ 977 Query: 549 PIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHF 608 P ++ + ++ EAL RW G++SP +FI IAE+ G I LG ++ A + R + Sbjct: 978 PQINSTSGRVVKVEALVRWQHPREGLVSPAEFIPIAEETGLILPLGEWVLNEACRQLRLW 1037 Query: 609 SQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHF 668 D + +N+S QL+ P + +GL+ LC+EITE+V R Sbjct: 1038 RDAGIT--DLTVAVNLSAHQLHSPALIPMVARTLGNHGLEGADLCLEITESVAMRDTTAS 1095 Query: 669 YLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRII 726 ++ LR G+ +SIDDFGTG S+L + D++K+D F +I I Sbjct: 1096 IAQLQALRDLGIHLSIDDFGTGYSSLSYLKLLPIDTLKLDQSFVCEIEFNPSDVAICAAT 1155 Query: 727 FDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE 782 LA + V+AEG+E+E R L C QGYL+ P+P +++ ++E Sbjct: 1156 IALAHSLGLEVVAEGIETETQRRLLASHRCDFMQGYLFSAPLPA---ERALAYIRE 1208 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 732 bits (1890), Expect = 0.0, Method: Composition-based stats. Identities = 123/598 (20%), Positives = 229/598 (38%), Gaps = 43/598 (7%) Query: 198 LNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIE 257 L W + + + ++ + A+ +L + +S + D Sbjct: 824 LMWDEHDRFEGLLGIARDI-----SQQRRAERELRMAATVFEHSTAAIMVTDPAG----- 873 Query: 258 KTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMT 317 V N F Y ++L+ +L L L L + + E+ Sbjct: 874 --YIVQVNDSFSRLTGYSPADVLDQQPRL--LTADRQEANQLKHVLASLQHSGSWEGEIL 929 Query: 318 ELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQES 377 + T P I A++ EGD + + I+E K +E ++ L YD + Sbjct: 930 QKRKTGELYPSWVG-ITAVRDEEGDLVSFVCFFSDISERKASER----RIHRLAYYDALT 984 Query: 378 GFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIA 428 + N Q++ + + L + + G +++++++ R++ Sbjct: 985 HLPNRTLFQDRLHTALQQAERNGQWVVLMFLDLDRFKPINDSLGHAAGDRMLQEVATRLS 1044 Query: 429 EKYAQCCDIVTFNADLYLLLCRENVQ-------TFTRKIAMVNDFDSSFGYRNLRI---- 477 +Q + D + LL ++ F Sbjct: 1045 ACVSQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVAELILGRLARPFTLEGREFFVTA 1104 Query: 478 HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHA 537 P G + A+ ++ + F F E + + ++R A Sbjct: 1105 SIGVALSPQDGAELSLLMKNADTAMYHAKEMGKNNFQFYQAEMNARALERLELESDLRRA 1164 Query: 538 MEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQI 597 +E+GE L YQP + R + GAEAL RW RG++ P +FI + E+IG + ++G + Sbjct: 1165 LELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPPSEFIPVLEEIGLVAQVGDWL 1224 Query: 598 IKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEIT 657 + A + R + + + +N+S Q + ER I+ E G+ L +E+T Sbjct: 1225 LAEACKQLRSWHKAKVRVP--KVSVNLSARQFADGQLGERIAAILYETGIPPACLELELT 1282 Query: 658 ETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG 717 E+++ + L++ G+ I++DDFGTG S+L + D +K+D F + Sbjct: 1283 ESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNYLKQFPIDVLKIDRSFVDGLPH 1342 Query: 718 --TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 +I R I +A + VIAEGVES+ L + GC + QGYL+ +PMP + Sbjct: 1343 GEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAEQF 1400 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 731 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 121/582 (20%), Positives = 227/582 (39%), Gaps = 37/582 (6%) Query: 216 VLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYP 275 + ++ E R ++ II + + + N+ F Y Sbjct: 266 IHIVEDITERKNFEDNLRLSATVFEGSTEAIIITDA------RANILRVNSAFTAMTGYA 319 Query: 276 GGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEA 335 ++ + +L L T + E+ P + A Sbjct: 320 DHEVVGKNPRL--LKSGNHHEEFYRAMWATLSSTGQWQGEIWNRRKNGDIFPAWL-TLCA 376 Query: 336 LKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES------- 388 ++ E + I I K+AE +L S+D +G + Sbjct: 377 VRNSEDKITNYVGISRDITLRKEAE----ERLSYQASHDALTGLPNRARFHDRLTHALAR 432 Query: 389 --NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYL 446 + A+ + L + + G + +++ + +R+ + + + D ++ Sbjct: 433 AGRDRHEFAILFLDLDRFKVINDTLGHTVGDFLLQGVTKRLLGGTRESDTLARWGGDEFI 492 Query: 447 LLCR-----ENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEK 497 +L E+ R+I ++ F + + P GE+ + Sbjct: 493 ILLESIRGAEDAAVAARRI--LDVLAEPFSVQGHEVFVSGSIGISVYPRDGEDVQALLRC 550 Query: 498 LKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 +A+ +D +++ F + E + + ++R+A++ E L YQP V+INT Sbjct: 551 ADIAMYRAKDSGKNDYQFYESTMSTGGLERLKLEGDLRYALKRNEFVLHYQPRVNINTGL 610 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 I+GAEAL RW +RG++ PL FI +AE+ GFI +G +++TA + R + Sbjct: 611 IVGAEALIRWDLPDRGLLWPLDFIPLAEESGFIIPIGEWVLRTACLQCRKWQDAGVPHP- 669 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK 677 + +N+S Q + + I+KE GL L +EITE+ + E ++ L + Sbjct: 670 -RVSVNLSTHQFKKDNLTSTVDRILKETGLSPGLLELEITESAMMENLEKAVATLQGLAE 728 Query: 678 QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNRI 735 GV ++IDDFGTG S+L ++K+D F I I I L + + Sbjct: 729 LGVNVAIDDFGTGYSSLGYLKRFPIGALKIDQSFVRHIPSNIDDTAIAMSIISLGKTLNL 788 Query: 736 PVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 V+AEGVE+++ L C +AQGYL+ +P+ + Sbjct: 789 KVVAEGVETQEQLTVLRNYQCDEAQGYLFSQPVDADRMTEFL 830 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 731 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 110/591 (18%), Positives = 226/591 (38%), Gaps = 37/591 (6%) Query: 210 ISANDEVLFLKQGHEIIAKNQLAREKLI----IYNSEGNYNIIDSVDTEYIEKTSAVPNN 265 E + + + I++ + L ++++ I+ + N Sbjct: 321 FGPQGEFICYEGTVQDISERKRTEAHLQLMAMVFSNSNEAIIVTDASNRI------IATN 374 Query: 266 ALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAF 325 F Y +++ + ++ L + E+ + Sbjct: 375 PAFTCLTGYQPDDVIGKNPRI--LSAGTTPTEVFSDMWTCLHREGAWQGELWDRKKNGEA 432 Query: 326 LPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI 385 P I ++ +G + I I+E+K + ++ L +D + ++ Sbjct: 433 YPKWL-SISLVRDEDGQIRNHIGSFIDISELKATQ----ERIRHLAHHDTLTNLANRFSL 487 Query: 386 IES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCD 436 E N LA+ +I L + + G ++++ ++ +R++ + Sbjct: 488 HEKLAQALAFCKRNRMQLALMLIDLDRFKTINDTLGHQAGDELLVQVAKRLSHAVRESDI 547 Query: 437 IVTFNADLYLLLCREN---VQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGE 489 + D +++ + + + + + + P G Sbjct: 548 VARLGGDEFVIALPGIGSPADAAHLADDITREISAPYLIKGQELRTSPSIGICVYPGDGS 607 Query: 490 NAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQP 549 + +A+ + + + F + E + + ++R A+ E L YQP Sbjct: 608 EIGDLLKNADVAMYHAKANGRGNYQFFTEDMNIATTERMCLESDLRLAITRREFLLHYQP 667 Query: 550 IVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFS 609 +D+ + I+G EAL RW RG++SP FI IAE+ G I +G +++ A + + + Sbjct: 668 QLDLRSGTIVGVEALIRWQHPTRGLVSPADFIPIAEESGMIAAIGDWVLEEACRQLKVWQ 727 Query: 610 QRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFY 669 R + IN+S Q + R ++ N L A+ L +E+TE++ + Sbjct: 728 NRGIT--HLRMSINLSAGQFLDKTLPARIHELLAANDLSADRLDLEVTESMSMASPDESI 785 Query: 670 LNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIF 727 ++ L G+ +SIDDFGTG S+L + ++K+D F DI I + Sbjct: 786 SVMKTLSSSGLTLSIDDFGTGYSSLAYLKLLPIHTLKIDRSFVKDIESDPNDADICDVTV 845 Query: 728 DLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 LA + V+AEGVE+E + L+ +GC + QGYL KP+P ++ + Sbjct: 846 LLAHKLGLEVVAEGVETEAQLKFLLSIGCEKVQGYLISKPLPADQAERFIR 896 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 731 bits (1888), Expect = 0.0, Method: Composition-based stats. Identities = 129/596 (21%), Positives = 240/596 (40%), Gaps = 43/596 (7%) Query: 214 DEVLFLKQGHEIIAKNQLAREKLII----YNSEGNYNIIDSVDTEYIEKTSAVPNNALFE 269 +L L+ I +L E+L + + + I D+ T + N F+ Sbjct: 553 GHLLGLRGTGRNITGRKLKEEQLRVAAAAFETHEAIMITDAHGT-------IIKVNQAFQ 605 Query: 270 IYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDS 329 Y +L + ++ L R E+ + + P Sbjct: 606 RITGYSQEEVLGENPRI--LSAGRNEKSFYSAMWQQLTTLGRWRGEIWDKRKSGQIYPKW 663 Query: 330 TDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES- 388 I A++ G E ++I + I + K AE ++ +L YD + +++ Sbjct: 664 -MTITAVRDENGKTTEYVAIFSDITQRKLAE----EEIRNLAFYDALTRLPNRRLLLDRL 718 Query: 389 --------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTF 440 + ++ AV + + + + G D + ++ ++ +RI + + Sbjct: 719 HAALSVSARSRRFGAVLFLDMDRFKTLNDTMGHDYGDLLLIEVAERIKLCVREIDTVARL 778 Query: 441 NADLYLLLCRENV--------QTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQG 488 D +++L E + + + + Sbjct: 779 GGDEFVILVEEIDTRAEETSKHIAAIAEKIRSALSVPYRLKEKHHHSSPSIGVCLYRGIE 838 Query: 489 ENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQ 548 E+ + +A+ +D + F D +E + + ++RHA+ +L L YQ Sbjct: 839 ESTDDLLKHADMAMYQAKDSGRNAVRFFDPLMQQAVEARVTLENDLRHALPNDQLQLYYQ 898 Query: 549 PIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHF 608 VD N R +GAEAL RW+ RG++SP FI IAE+ I E+G ++KTA + + Sbjct: 899 IQVD-NDRRAIGAEALVRWIHPIRGMVSPAHFIPIAEETSLILEVGAWVLKTACLQLAVW 957 Query: 609 SQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHF 668 + R + + +L +NVS Q + F E +++ + L +E+TE+V+ Sbjct: 958 ADR-PMTCNLILAVNVSVQQFKQVGFVEHIAELIRAYCIVPQRLKLELTESVVLNDVSDI 1016 Query: 669 YLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRII 726 + L+ GVR+S+DDFGTG S+L + D +K+D F +I +V+ I Sbjct: 1017 VQKMCALKSLGVRLSMDDFGTGYSSLSYLKNLPLDQLKIDQSFVRNIATDENDAVMVKTI 1076 Query: 727 FDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE 782 +A+ R+ VIAEGVE+E L + GC+ QGY + KP P + + + + Sbjct: 1077 IAMAQNFRLNVIAEGVETEAQLAFLKQNGCMCYQGYYFGKPAPIEQFQSQLEALSK 1132 Score = 44.3 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 10/40 (25%), Gaps = 1/40 (2%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLI 371 + G + I I E K AE N Sbjct: 165 SKTPVYDDTGQLIGVFGIARDITERKRAEAALKNS-EQQA 203 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 731 bits (1888), Expect = 0.0, Method: Composition-based stats. Identities = 121/610 (19%), Positives = 246/610 (40%), Gaps = 38/610 (6%) Query: 194 IHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDT 253 +H +N +E I+A + ++ H+ + + + + N+ II Sbjct: 320 LHNLINLERKDELGTLINAFNSMILSLDQHQNALRESESNFRALADNANDGLQIITD--- 376 Query: 254 EYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQF 313 A N EI Y LL + + + +II F + Sbjct: 377 ---SSHLAYVNKRAAEIVGYSVEEMLLTTIETIIHPDHLQMIIERKAK--TDAGEFVPKQ 431 Query: 314 SEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISY 373 E+ + +P + +G E ++I I + K AE +++ L Y Sbjct: 432 FEIMLAHRNGSCVPVEVTTARTIW--QGKQVE-LAIVRDITDRKKAE----DEIQQLAYY 484 Query: 374 DQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLC 424 D +G + + +N+ +A+ + L +++ G + ++ + Sbjct: 485 DTLTGLPNRSLLQDRLGQGIVQAVRDNRKVAIMFLDLDRFKSINDTLGHVAGDSLLATVA 544 Query: 425 QRIAEKYAQCCDIVTFNADLYLLLCR--ENVQTFTR-KIAMVNDFDSSFGYRNLRI---- 477 +R+ E + + D ++++ E+ + + ++ + I Sbjct: 545 ERLTECVRETDTVARIGGDEFVIIISAIEHAEDLNKIAEKILAAISKPLVLNDQEIFITA 604 Query: 478 HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHA 537 P G + + LA+ +D + F + + E++ + ++R A Sbjct: 605 SIGIAIYPEDGTDVQGLLKNADLAMYKAKDQGKNAFQYFSREMNVQALEHLILENSLRRA 664 Query: 538 MEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQI 597 +E E + YQP +D+ + ++G EAL RW + G++ P +FI +AE+ G I +G Sbjct: 665 LERNEFVIFYQPQMDLKSGRLVGMEALIRWQHPDLGLLPPSRFIPMAEETGLILPIGEWA 724 Query: 598 IKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEIT 657 ++TA + R + + + +N+ Q + F E ++K+ GL + L +E+T Sbjct: 725 LQTACAKNRAWMDAGFM--PLRVAVNLCGIQFRQKKFIELIEAVLKKTGLAPSQLELELT 782 Query: 658 ETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG 717 E+++ E + +L++ GV ++IDDFGTG S+L + +K+D F D+ Sbjct: 783 ESMLMSKAEESTTVLHKLKEMGVSLAIDDFGTGYSSLSYLKNFPINRVKIDRSFIRDVPN 842 Query: 718 TAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 IV I +A + V AEGVE+ L C + QGYL P+P + + + Sbjct: 843 NPDDTAIVSAIIAMAHNLNLKVTAEGVENHSQLEFLSTRNCNEIQGYLLSSPLPEAEFTR 902 Query: 776 SGK---LVKE 782 + +++E Sbjct: 903 FLRGGMMIQE 912 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 731 bits (1888), Expect = 0.0, Method: Composition-based stats. Identities = 127/620 (20%), Positives = 244/620 (39%), Gaps = 53/620 (8%) Query: 194 IHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDT 253 + ++ R LNE L+Q L++ + + NQ ++ + I ++ Sbjct: 307 LAEEMRIRELNEQLEQR-------VLERTARLESANQELNREIAERSRAEAELRIAAIAF 359 Query: 254 EYIE-------KTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTT 306 + E + N F Y +++ + L L T Sbjct: 360 DSQEGMMVTDAHGVILRVNRAFVEETGYSAEDVVGRKRTM--LTSGREDAALDDAMWETV 417 Query: 307 RVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNK 366 + E+ + P I A+K + G ++ I + K E ++ Sbjct: 418 QRCGAWQGEVWDRRKNGEVYPVWL-TISAVKGQGGLVTHYVATHIDITQRKAVE----DQ 472 Query: 367 LLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERN 417 L L YD + +++ + A+ I L +A+ G D + Sbjct: 473 LHKLAFYDPLTQLPNRRLLLDRLGHVLAGSTRSRNQGAIMFIDLDNFKALNDTQGHDVGD 532 Query: 418 KIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQT-------FTRKIAMVNDFDSSF 470 +++ ++ QR+ QC + D ++++ ++ ++ D + Sbjct: 533 RLLAEVAQRLKSSVRQCDTVARLGGDEFVVMVQDLAADSMVVAQVEAVAGKILAALDCPY 592 Query: 471 GY-------------RNLRIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCD 517 + N ++ LA+ +D + F D Sbjct: 593 RLVFDAELGRRNALNYHCTASIGITLFGAHSTNVDELLKQADLAMYQAKDSGRNAIRFFD 652 Query: 518 DAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISP 577 I + + ++R A+E G+ L YQP V + + GAEAL RW + RG++ P Sbjct: 653 PEMQAAITSRVALEADLREAVEAGQFQLYYQPQVVGESHRLTGAEALLRWHHSRRGMVPP 712 Query: 578 LKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHER 637 +FI +AE+ G I LG +++TA + ++ + + +NVS Q+ + F ++ Sbjct: 713 SEFIPLAEETGLILPLGQWVLETACAQLATWASQ-PEMAQLTVAVNVSAHQIRQTDFVDQ 771 Query: 638 FTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRF 697 ++ + G L +E+TE+++ E + L+ +GV S+DDFGTG S+L Sbjct: 772 VLAVLADAGANPQRLKLELTESLLVSNVEDIIAKMTLLKSRGVGFSLDDFGTGYSSLSYL 831 Query: 698 YEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLG 755 + D +K+D F ++ I ++I LA + VIAEGVE+E+ L + G Sbjct: 832 KRLPLDQLKIDQSFVNEVLTDANDAAIAKMIVALAESLGLAVIAEGVETEEQRNFLAESG 891 Query: 756 CVQAQGYLYQKPMPFSAWDK 775 C QGYL+ KP+P + +++ Sbjct: 892 CHAYQGYLFSKPLPLAGFEQ 911 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 730 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 112/496 (22%), Positives = 199/496 (40%), Gaps = 26/496 (5%) Query: 302 YLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREG-DAKEIISIKNSIAEMKDAE 360 E T V T I ++ E + I+I + I K AE Sbjct: 319 VWAIVGEHGSWSGETT-GVRCGGQRYPRTLMINGVRDPETREITHFIAIFSDITARKRAE 377 Query: 361 IERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVF 411 + + L +D +G ++ N Q LAV + L + + Sbjct: 378 AD----IQHLAYHDTLTGLANRFSLTARLQLSVAEARRNGQRLAVMFLDLDRFKHINDSL 433 Query: 412 GVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE---NVQTFTRKIAMVNDFDS 468 G +++++++ +R+ + + + D ++++ + ++ + Sbjct: 434 GHPVGDELLKQVARRLRDAVRETDTVARLGGDEFVVVLQGIGGAHDVTHVAAKLLAQLSA 493 Query: 469 SFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEI 524 + + P + + A+ + ++F F D Sbjct: 494 PYCVDTTELHTTASIGISLFPDDSADPAALMRNADTAMYHAKAAGRAKFQFYTDEMNRAA 553 Query: 525 EENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIA 584 + + R +R A+ GE L YQP D + G EAL RW + G+I+PL+FI +A Sbjct: 554 TARLDLERKLRGAVARGEFELWYQPQFDSRHGHLTGLEALVRWRHPQDGLIAPLRFIPLA 613 Query: 585 EDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKE 644 E+ G I E+G +++ A + R + + + +N+S QL E + T + Sbjct: 614 EETGVIVEIGTWVLREACRQARQWLDAGL--PELRISVNLSVRQLREKCLVDTVWTTLAA 671 Query: 645 NGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDS 704 +GL+ L +EITE+ + + ++ L+ GVRI+IDDFGTG S+L D Sbjct: 672 SGLRPGLLELEITESAVMDNPDEAVALLQALKNLGVRIAIDDFGTGHSSLSYLKLFPLDH 731 Query: 705 IKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGY 762 +K+D F DI A IV LA + VIAEGVES L +LGC + QG+ Sbjct: 732 LKIDRSFISDIEHDANDTMIVAAAVSLAHNLGLSVIAEGVESAVQVARLRELGCDELQGF 791 Query: 763 LYQKPMPFSAWDKSGK 778 + +P+ + + Sbjct: 792 HFSRPVTADVVENLLR 807 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 730 bits (1885), Expect = 0.0, Method: Composition-based stats. Identities = 123/579 (21%), Positives = 229/579 (39%), Gaps = 39/579 (6%) Query: 224 EIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNAS 283 + + + R ++ S +I ++ V N + Y +L + Sbjct: 221 QKVRATEALRLSATVFASIREGVVITDLEPRI------VAVNRAYMRITGYSEEQVLGKN 274 Query: 284 DKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIR---- 339 K+ T + E+ P I A+ I Sbjct: 275 PKIIKSGLHDK--TFYQAMWATLKATGHWSGEVWNRRKNGEIYPQWL-TINAVCIDSSCC 331 Query: 340 -EGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI---------IESN 389 E ++ + + I+++K +E +L L YD +G + Sbjct: 332 DESNSCNYVGVFTDISQIKQSEA----QLAQLAHYDPLTGLPNRLLAQSQLHQAIERAQR 387 Query: 390 NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC 449 + + + V I L + V G ++++ KL +R+ ++ + + D +LL+ Sbjct: 388 HGRLVGVLYIDLDRFKNVNDSLGHPVGDELLIKLAERMKKRVREEDTLARLGGDEFLLVL 447 Query: 450 REN---VQTFTRKIAMVNDFDSSFGY-RNLRI----HKSAICEPLQGENAWSYAEKLKLA 501 + +++N S F I P NA + +A Sbjct: 448 EDVRDLGDPAFVAQSLINLLTSPFVLPSGHEIFINASIGISLFPEDASNATELIQHSDMA 507 Query: 502 ISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGA 561 + + + + + +A E + + +R+A+ EL L YQP+VD T ++G Sbjct: 508 MYQAKKEGRNTYRYHTEALSVAANERLIMENRLRYALSAEELILHYQPLVDARTGYVVGV 567 Query: 562 EALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLH 621 EAL RW + ++ P KFI IAE+ G I LG +++TA + R + ++ Sbjct: 568 EALVRWQPPGKAMVPPGKFIPIAEETGLIVPLGEWVLRTACKQARAWIDAGL--SPLVMA 625 Query: 622 INVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVR 681 +N+S Q + I++E L A+ L +E+TE++ E + +L+ GV Sbjct: 626 VNLSVRQFQSENLVGMVQRILEETQLPADYLELELTESMFMEHVEQSIETLNKLKTLGVH 685 Query: 682 ISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIA 739 ++IDDFGTG S+L D +K+D +F D+ +I I +AR ++ V+A Sbjct: 686 LAIDDFGTGYSSLIYLKRFPIDKLKIDQRFVRDLADDHNDREIAATIIAMARGLKLGVLA 745 Query: 740 EGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 EG+ESE+ L + C QGYL+ +P+P + + Sbjct: 746 EGIESEEQLAFLRQQDCDYYQGYLFHRPVPAIELEAWLR 784 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 730 bits (1885), Expect = 0.0, Method: Composition-based stats. Identities = 124/594 (20%), Positives = 230/594 (38%), Gaps = 36/594 (6%) Query: 198 LNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIE 257 L+ + + + + + + + + + ++ + +I D Sbjct: 490 LDVEIHSRLFEYRGRSAIIGVVVDISDRVQADANQKLASKVFENAAEGILITGADYRI-- 547 Query: 258 KTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMT 317 + N F YP ++ ++F ++ V L EM Sbjct: 548 ----IAVNQAFTRITGYPPELVIGRVSRIFRDNTSW-----SVAMLDGLARHGHWQGEML 598 Query: 318 ELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQES 377 + + + P + I A++ G + + I K AE +L L ++D + Sbjct: 599 DRRRSHEWYP-AELSISAVRDDAGAITNYVGVFADITVRKQAE----ERLQFLANHDPLT 653 Query: 378 GFIKNMAIIE---------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIA 428 +I +++ Q +AV + L + + FG ++++R+ R+ Sbjct: 654 RLPNRSWLIACLEDRIQQIASSGQQVAVMFLDLDRFKLINDSFGHQTGDELLRETASRLE 713 Query: 429 EKYAQCCDIVTFNADLYLLLCRENVQTFTR---KIAMVNDFDSSFGYRNLRI----HKSA 481 + I D + LL T ++ + Sbjct: 714 QVVGGRGQIARLGGDEFTLLVSHFASQATLSTLAEDILAVLAQPLWLEGQELIVTGSLGI 773 Query: 482 ICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIG 541 P G +A + + +A+ ++ + + F + E + + R +R A+E G Sbjct: 774 SVYPHDGSDARTLLKNADVAMYRAKEAGKNTYQFFAAEMNAQAIERLQLERGLRQALERG 833 Query: 542 ELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTA 601 E L +QPIV T + E L RW E G++SP++FI +AE+ G I +G +I+ A Sbjct: 834 EFELHFQPIVAAATYRLEALEVLLRWRHPELGLVSPVRFIPLAEETGLIRPIGDWVIRQA 893 Query: 602 MGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVI 661 + + L IN+S Q + + + E G+ A L +E+TE+++ Sbjct: 894 CRQLAEWDCLGLHVP--RLAINLSARQFEQQGLIMQVAGALAEAGIAAGRLELEMTESMV 951 Query: 662 ERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTA 719 + + +L+ GVR+SIDDFGTG S+L D++K+D F + G Sbjct: 952 MQNPSEAVSLLGELKALGVRLSIDDFGTGYSSLSYLKRFPLDTLKIDRSFIEGLPGDGDN 1011 Query: 720 GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 I I +AR V+AEGVE+E A L GC QGYL+ +P+P + Sbjct: 1012 AAIAEAILAMARKLSFSVVAEGVETEAQAAFLCAKGCQLLQGYLFSRPLPAAEL 1065 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 730 bits (1885), Expect = 0.0, Method: Composition-based stats. Identities = 120/593 (20%), Positives = 239/593 (40%), Gaps = 43/593 (7%) Query: 212 ANDEVLFLKQGHEIIAKNQLAREKLII----YNSEGNYNIIDSVDTEYIEKTSAVPNNAL 267 AN + L + + A+++L I + S+ + D+V + + N Sbjct: 432 ANGNISLLLGITRDVTASMHAKQQLRIAATAFESQEGMLVTDAVG-------AILRVNQA 484 Query: 268 FEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLP 327 F Y ++ + ++ L + E+ P Sbjct: 485 FTRITGYTADEVIGKNPRI--LNSGRHDAYFYKEMWERIKRTGEWEGEIWNRRKNGDVYP 542 Query: 328 DSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE 387 + I A+K G+ ++ I K +E ++ +L +D + + + Sbjct: 543 E-HLTITAVKDAGGNVVNYVATLMDITASKASE----EEIRNLAFFDPLTRLPNRRLLQD 597 Query: 388 S---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIV 438 + + A+ I L + + G D + ++ K+ R++ + + Sbjct: 598 RLQQALASCGRSGKSGAILFIDLDNFKNLNDTLGHDIGDLLLEKVAIRLSSCVREGDTVA 657 Query: 439 TFNADLYLLLCRENVQTFTRKI--------AMVNDFDSSFGYRNLRI----HKSAICEPL 486 D ++++ + ++ + + A Sbjct: 658 RIGGDEFVVMLEDLSDNILDAAEQTESVGSKILASLNVPYQLGIHTYDNSPSIGATLFND 717 Query: 487 QGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLV 546 + ++ +A+ + + F D + + + +R A+E + L Sbjct: 718 NHNSIDELLKQADIAMYQAKKAGRNTMRFFDPRMQQSLSARLALELELRKAIEKDQFQLY 777 Query: 547 YQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFR 606 YQ VD T LGAEAL RW+ E G+++P +FI +AE+ G I +G+ +++TA + + Sbjct: 778 YQIQVD-ETHRPLGAEALLRWMHPEHGLMAPAEFIPMAEETGLIVPIGWWVLETACTQLK 836 Query: 607 HFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINE 666 + + L + +L INVS Q ++P F ++ + G+ L +E+TE+++ + Sbjct: 837 AWEKD-PLTRNLVLSINVSAKQFHQPDFVDQVQAAVDHYGIDPALLKLELTESILLENVD 895 Query: 667 HFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVR 724 + L+K GV S+DDFGTG S+L+ + D +K+D F +I IV Sbjct: 896 TTIKRMSALKKTGVGFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFMQEITSDSSDMAIVS 955 Query: 725 IIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 I +A+ ++ VIAEGVE+E+ + L++ GC QGYL+ KP+P ++K Sbjct: 956 TIIAMAQSMQMGVIAEGVETEEQRQLLLRKGCNHFQGYLFSKPVPVEQFEKLL 1008 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 729 bits (1884), Expect = 0.0, Method: Composition-based stats. Identities = 120/564 (21%), Positives = 219/564 (38%), Gaps = 35/564 (6%) Query: 228 KNQLAREKLIIYNSEGNYNIID-SVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKL 286 L + L + S + I D + EY N+ F Y +L + + Sbjct: 594 SETLLKLSLAVEQSPNSIVITDLDANIEY--------ANSNFTKVTGYSLDEVLGKNPRF 645 Query: 287 FYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEI 346 + +T E+ +S I + +G Sbjct: 646 MQSGKTPKATYEDMWAHLT--RGEPWKGELFNRRKDGTEYIESVL-ISPVSQVDGRVMNY 702 Query: 347 ISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVG 397 ++IK I E + E ++ L +D +G + E + + + V Sbjct: 703 LAIKEDITEKRLTE----ERIEKLEHFDHLTGLPNRTQLNERFKYALSLAQRSGEQMTVM 758 Query: 398 IIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFT 457 + L + + G ++++ + +R+ E + D ++L+ + Sbjct: 759 FLDLDHFKDINDTLGHSIGDQLLMDVAKRLKETLRDEDTVSRQGGDEFILILPGTDENGA 818 Query: 458 R--KIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFS 511 ++ +F + + P GEN + ++ A+ ++ + Sbjct: 819 AHVAAKLMEAVSQAFQFEQHELVATCSIGIAIYPHDGENFETLSKNADTAMYRVKHDGRN 878 Query: 512 EFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAE 571 F F + + +RHA+ G+L L YQP + ++GAEAL RW E Sbjct: 879 GFCFFTSEMQAHSARTLQLGNALRHALTRGQLHLHYQPQISTQDGHVVGAEALLRWQHPE 938 Query: 572 RGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNE 631 G ISP +FI IAED G I +G +++TA+ + + + ++ +N+S Q + Sbjct: 939 LGSISPAEFIPIAEDNGQIIPIGEWVLRTAIKQLKDWMDSGL--PPMIMAVNLSAAQFRQ 996 Query: 632 PHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGL 691 + E T+I+ E+ + L +E+TE V + +++L G+++SIDDFGTG Sbjct: 997 SNLMELVTSILDESKVPHRYLELELTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFGTGY 1056 Query: 692 SNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVAR 749 S+L +K+D F DI IV I ++A + IAEGVE+ Sbjct: 1057 SSLSYLKRFKVYKLKIDQSFVHDITDDPDDKAIVAAIINMASSLGMQTIAEGVETAGQLS 1116 Query: 750 ELIKLGCVQAQGYLYQKPMPFSAW 773 L GC + QGY + KP+P + Sbjct: 1117 FLRLQGCNEVQGYYFSKPLPAEQF 1140 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 729 bits (1884), Expect = 0.0, Method: Composition-based stats. Identities = 134/600 (22%), Positives = 245/600 (40%), Gaps = 39/600 (6%) Query: 200 WRYLNEYLDQISANDEVLFLKQGHEIIAKNQLA-REKLIIYNSEGNYNIIDSVDTEYIEK 258 ++ D+ + N+L R+ I++ S +I E+ Sbjct: 494 ENHVTTSFDRKGKPQRFTGVMTDITQQKNNELQLRQAAIVFESTREGIVITDA-----ER 548 Query: 259 TSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTE 318 N AL ++ F YP LL ++F+ + L EM Sbjct: 549 NIIKVNRALIDL-FGYPENELLGQRPRIFHSGKHDGHFYQQM--LQALDEHGFWRGEMWN 605 Query: 319 LVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESG 378 LP T I + G+ ISI I+++KD+E +L + +D +G Sbjct: 606 RRQNGELLPMMT-SINPVCDSNGEILYYISIYTDISQLKDSEA----RLEHMALHDPLTG 660 Query: 379 FIKNMAI---------IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAE 429 + N+ +A+ ++ L + V FG ++++ ++ R+ + Sbjct: 661 LPNRAMLGQKLDSALQHAMLNSTRVALLMLDLDHFKNVNDSFGHHFGDELLHQVSARLKQ 720 Query: 430 KYAQCCDIVTFNADLYLLLC-----RENVQTFTRKIAMVNDFDSSFGYRN-----LRIHK 479 + + + D + +L ++V +I ++ F N + Sbjct: 721 QLRESDVVCRLGGDEFTVLLQNNPSPDDVSLLAERI--IHALHQPFLLSNAREVMIGTSI 778 Query: 480 SAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAME 539 P G A ++ A+ + + + + + + + + + + A+ Sbjct: 779 GISLYPEHGSTAEELMQQADTAMYRAKHDGRDGYRYFSEELFLKAKARLELEQRLHRAIT 838 Query: 540 IGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIK 599 E + YQP + I T I+GAEAL RW E G+I P +FI++AE+ G I +G ++ Sbjct: 839 GQEFKVFYQPQISIKTNQIIGAEALLRWDDPEYGLIPPSEFISVAEETGLIQNIGEWVLY 898 Query: 600 TAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITET 659 + R + + L +N+SP QL+ + TI+ +G A+ L +E+TE+ Sbjct: 899 ETCRQGRDWLDQHL--PPINLAVNLSPLQLHHGDVRQLIGTILHNSGFPAHHLELELTES 956 Query: 660 VIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG-- 717 + E ++ LR+QG+RI+IDDFGTG S+L + D +K+D +F DI Sbjct: 957 ALMEQQEETVKILQGLRQQGIRIAIDDFGTGYSSLAYLKQFPLDVLKIDKRFVEDIPHER 1016 Query: 718 TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 +I I + R+ V+AEGVE++ L + GC QGYLY P+P + + Sbjct: 1017 DDMEIAATIVAMGHSLRLTVLAEGVETKAQLEFLEQQGCDYYQGYLYSMPLPAEEFAQLL 1076 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 729 bits (1884), Expect = 0.0, Method: Composition-based stats. Identities = 110/536 (20%), Positives = 205/536 (38%), Gaps = 31/536 (5%) Query: 261 AVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELV 320 + N F Y ++ + + L + E+ Sbjct: 326 ILSVNPAFTRMTGYAPEEVVGLNPSV--LNSGRQSPAFYARMWDGLLGDGQWQGEVWNRR 383 Query: 321 NTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI 380 T P I A++ REG ++ I+ +K+ E ++ L YD +G Sbjct: 384 KTGEVYPQ-LLHITAIRDREGVLTHYAALFTDISRLKETEA----RIRDLAYYDPLTGLP 438 Query: 381 KNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKY 431 + + LAV + L + + G +K++ ++ R+ Sbjct: 439 NRRLLDDRLQVELAHAARLRCRLAVMFVDLDRFKRINDSLGHAVGDKLLVEIAARLRASL 498 Query: 432 AQCCDIVTFNADLYLLLC-----RENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAI 482 + D +L++ + T R+ MV + + Sbjct: 499 RDDDTVARMGGDEFLVVLNNLSGPDEAATMARR--MVAELRRPVNVEGRELVVTTSVGVA 556 Query: 483 CEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGE 542 P +A + + +A+ +D + F + A E + + + A+ E Sbjct: 557 VYPDDSRDADTLVKHADVAMYRAKDEGRNSFQLFEPAMNARSLERLALETALHRALPRDE 616 Query: 543 LFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAM 602 L L +QP++ ++ EAL RW + G++SP FI +AED G I +G ++++A Sbjct: 617 LQLYFQPVMKAEGGELVAVEALLRWRHPDLGLVSPADFIPLAEDTGLIVPIGEWVLRSAC 676 Query: 603 GEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIE 662 R + + + +N+S Q E F +++ E G+ L +E+TE+++ Sbjct: 677 EHHRRWCEAGG--APLHMMVNISARQFREEGFAAMVGSVLAETGMTPGDLTLELTESMLM 734 Query: 663 RINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AG 720 + ++ LR GV ++IDDFGTG S+L D +K+D F I Sbjct: 735 DDTDRALARLDHLRALGVCLAIDDFGTGYSSLAYLKRFPIDELKIDRLFVRGIDRNTRDA 794 Query: 721 KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKS 776 +V I L + V+AEGVE+ L + GC AQG+ + P+P+ + K+ Sbjct: 795 ALVSAIVSLGHSLGLRVVAEGVETAAHLDVLRRQGCDLAQGFHFSPPLPWEEFVKA 850 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 729 bits (1883), Expect = 0.0, Method: Composition-based stats. Identities = 117/630 (18%), Positives = 238/630 (37%), Gaps = 41/630 (6%) Query: 167 FDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEII 226 PG+ LH + + HV L +Y + Sbjct: 132 LSEPGRVFDHLPLHTSL----VRESPIRHVRLESIAFTQYGS--GRLCRTALVDLSDRKR 185 Query: 227 AKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKL 286 +++L + S I DS++ V N F Y +L + KL Sbjct: 186 EEDRLNLIAQVFERSTDAIMITDSLNR-------IVSVNRAFTTVTGYSADEVLGRNPKL 238 Query: 287 FYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEI 346 L E++ + I A++ G + Sbjct: 239 --LASGRHDRDFYREMWSAIERNGSWSGEISNRRKNGEIYNEWL-TIHAVRNESGGIENC 295 Query: 347 ISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVG 397 I+I I + + A ++++ L YD + + + AV Sbjct: 296 IAIYAEITDQRAA----ASRIQFLAHYDPLTLLPNRALLQDRMHQGLAHAAREGTRAAVL 351 Query: 398 IIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR--ENVQT 455 + L + + G + +++++ QR+ + + D ++++ ++ + Sbjct: 352 FLDLDRFKTINDSLGHLVGDHLLQEVAQRLKASVREDDTVARRGGDEFIVMLPHVDSAEQ 411 Query: 456 FT-RKIAMVNDFDSSFGYRNL----RIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMF 510 ++ + + P + + +A+ + Sbjct: 412 AAHVAGKIIEAMEQTIPVNGYVLNVSFSIGISVFPDDAMDPDTLIRNADIAMYRSKASGR 471 Query: 511 SEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSA 570 ++F F E + + ++ A+E GE L++QP + + +I+GAEAL RW Sbjct: 472 NQFQFFTADMNAHALERLALENDLHRAVERGEFRLMFQPQFE-GSGSIIGAEALLRWQHP 530 Query: 571 ERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLN 630 +RG+++P +FI +AE+ G I +G +++ A + R + K + +N+S Q + Sbjct: 531 QRGLVTPAEFIPVAEETGLIVPIGTWVLERACQQVRAWRDAGLKK--ITVSVNISALQFS 588 Query: 631 EPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTG 690 + + E ++ + ++ +L +E+TE+V+ + + +L++ GVR++IDDFGTG Sbjct: 589 QKNLLELIRRLLAVSNIEPGTLELELTESVLMHDHVATSGLMSELKEMGVRMAIDDFGTG 648 Query: 691 LSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNRIPVIAEGVESEDVA 748 S+L +K+D F D+ AG I I LA+ + VIAEGVE+ A Sbjct: 649 YSSLSYLRSFPISKLKIDQSFVRDLSDGGDAGAITGAIIGLAKNLNMRVIAEGVETAQQA 708 Query: 749 RELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 L C + QG+ + +P+ + + + Sbjct: 709 SFLQAQCCDEFQGHFFSQPVSPEKFAELLR 738 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 729 bits (1882), Expect = 0.0, Method: Composition-based stats. Identities = 146/811 (18%), Positives = 281/811 (34%), Gaps = 60/811 (7%) Query: 4 LYEKIKIRLIILFLLAALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKDIER 63 + E L+ L + + +I Q +R +R + ++ VG ++ Sbjct: 261 VMESTNQSLLTLQASVGAIMVTILILIASQEERKRVNRRLLQVQQDLEAKVGQRTHELYT 320 Query: 64 SALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVVYHQ 123 S L +E+ R L + L++ +D + + Y Sbjct: 321 SNKQL---------AQEVTRQHQLGETLKSLLNATNFTSNDQFLQSCVKDLANAYGAYFA 371 Query: 124 E---------QVNGPLVDESGRVIFADFNPSKR--PWSVASDDSNNSWNPA----YNCFD 168 Q L +G + +F+ R P A + + + Y Sbjct: 372 FIGIFSDKTCQSIKTLAVWAGDKVEDNFSYRLRGTPCEDAMNHNVELISSRAALHYPEDK 431 Query: 169 RPGKKCISFTLHINGKDHDLLAVDKIHV-DLNWRYLNEYLDQISANDEVLFLKQGHEIIA 227 + + + I V D + E++ + + Sbjct: 432 LLNELEVDSYFGAPLVAPSGETIGIIAVMDKKAMDIEEWVKPVLGLFANRVALELQRQST 491 Query: 228 KNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLF 287 ++ + S I DS D + N F Y ++ S +L Sbjct: 492 HKEMEMAASVFKESAEAIVICDSEDK-------ILRVNPAFYKITGYSQIEVVGQSPQL- 543 Query: 288 YLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEII 347 L I +L + E++ I +K GD ++II Sbjct: 544 -LQSDRPIQSMLHNREAALKKNDIWQCEVSGYRKNGEHFLSWQTVI-PVKDENGDTQQII 601 Query: 348 SIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI---------IESNNNQYLAVGI 398 I + I E K E + +L +D + +A + +AV Sbjct: 602 YIFSDITERKLFE----EHIYNLAHHDSLTQLPNRVAFQLQMNTALERAKRSKTQMAVMF 657 Query: 399 IKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE---NVQT 455 I L + + G + +++++ +R + I F D + +L + T Sbjct: 658 IDLDHFKMINDTSGHPVGDLLLQQVAERFKRALRKEDVISRFGGDEFTVLLSNTRTDNAT 717 Query: 456 FTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFS 511 ++ F F + + P G++ S A+ ++ + Sbjct: 718 TVVARKLLACFYEPFKLPSSEVVISASIGIGVFPDNGDSVDSLMMNADSAMYRAKEKGRN 777 Query: 512 EFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAE 571 F F +E + + ++R A+E E L YQP D I+G EAL RW + Sbjct: 778 CFQFYTKEMNQYAQERLELELDLRKALERDEFVLHYQPQFD-PNGRIIGCEALIRWQHPD 836 Query: 572 RGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNE 631 +G++SP +FI +AE G I +G +I TA + + + + + +N+S Q Sbjct: 837 KGLLSPGEFINMAEITGLIVPIGKWVIDTACMQHKMWLSQGY--PALNISVNLSGRQFLH 894 Query: 632 PHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGL 691 E + +G+ + L +E+TE+++ E + + G+ +SIDDFGTG Sbjct: 895 HDLLETVKNAITTSGITPSCLELELTESIMMVNVEETIRTLNAISSLGIHMSIDDFGTGY 954 Query: 692 SNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVAR 749 S++ + +K+D F + IV+ I +A + VIAEGVE+ + Sbjct: 955 SSMSCLKRFPVNKLKIDQSFVRGLPQDKEDVAIVKSIIVMAHALNLTVIAEGVETLEQLE 1014 Query: 750 ELIKLGCVQAQGYLYQKPMPFSAWDKSGKLV 780 L C + QGY + +P+ + ++ + + Sbjct: 1015 FLKSSRCEEFQGYYFSRPILAADIEQYLQAL 1045 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 728 bits (1881), Expect = 0.0, Method: Composition-based stats. Identities = 107/484 (22%), Positives = 187/484 (38%), Gaps = 24/484 (4%) Query: 312 QFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLI 371 E + + + G ++ I I E K +E ++ L Sbjct: 99 INREEPVVDRQSGRIRWLLTSKFPVFNDTGKTIGLVGIGRDITERKQSE----EQIQYLA 154 Query: 372 SYDQESGFIKNMAII---------ESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRK 422 ++D + + + LAV I L + + G D ++++ Sbjct: 155 THDSLTALPNRFMFSKLLAVAIESARRHQRQLAVLFIDLDRFKNINDTLGHDAGDQLLIT 214 Query: 423 LCQRIAEKYAQCCDIVTFNADLYLLLCRE---NVQTFTRKIAMVNDFDSSFGYRNLRI-- 477 + R + D +++L E + Q +++ Sbjct: 215 MANRFRTCLRTSDIVGRLGGDEFVILLPELESHDQAARVAQKILSAAIQPLDVHGQECRV 274 Query: 478 --HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIR 535 P E+ + + +A+ ++ + + F E + + N+R Sbjct: 275 TASIGICLYPEDAEDEQALMKNADIAMYRAKEEGKNNYQFYSPDLKVRSLERLMLENNLR 334 Query: 536 HAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGY 595 A+E E FL YQ ++ T I G EAL RW E G ISP FI +AE+ G I LG Sbjct: 335 KALERHEFFLHYQAKRNLKTGKIAGVEALVRWQHPELGTISPAHFIPLAEETGLIVHLGR 394 Query: 596 QIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVE 655 +++ A + + Q+ + +N+S Q + + ++E+GL L +E Sbjct: 395 WVLRAACTQGVIWQQQGL--PPICIAVNLSARQFFDDNLINDIANALRESGLAPELLEME 452 Query: 656 ITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI 715 ITE +I + E + ++ GVR++IDDFG G S+L D++KVDS F DI Sbjct: 453 ITEGMIMQDAERAIRILTGIKALGVRLAIDDFGVGYSSLAHIKRFPIDTLKVDSSFIRDI 512 Query: 716 FGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 I I + + + VIAEGVE+++ L C Q QGY + KP+ + Sbjct: 513 PANREDRAITEAIIAMGKTLSLTVIAEGVETQEQENFLRDSACDQTQGYYFSKPVSPEEF 572 Query: 774 DKSG 777 + Sbjct: 573 TRFM 576 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 727 bits (1877), Expect = 0.0, Method: Composition-based stats. Identities = 115/574 (20%), Positives = 223/574 (38%), Gaps = 32/574 (5%) Query: 218 FLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGG 277 F+ + ++ +I + + + N F Y Sbjct: 899 FITDISQHKKTEAQIELASKVFEQSREGIMITDSNQKI------LMVNEAFSEISGYSVE 952 Query: 278 NLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALK 337 L + ++ L + + E+ P+ I Sbjct: 953 ETLGKTPRM--LASGRHSREFYQNVWKSIKEKGHWQGEIWNRRKNGEIFPEWL-SISRGL 1009 Query: 338 IREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--------- 388 G+ E + I N I+++K++E K+ L YD +G + +++ Sbjct: 1010 DTSGNVTEYVGIFNDISKVKESE----EKIKHLAHYDPLTGLVNRELLMDRLNHSISTAD 1065 Query: 389 NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL 448 NN LA+ I L + V G ++++ ++ QRI + I D ++++ Sbjct: 1066 RNNTPLALLFIDLDHFKNVNDTLGHQVGDQLLIEVGQRILKILRDEDTIARQGGDEFIVV 1125 Query: 449 CRENVQ--TFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAI 502 + + ++ + ++ P G++A S + A+ Sbjct: 1126 LPDTGENGAVHVAEKILESISDQLNLKPYKLFITPSIGIAVYPQDGKDADSLLKNADTAM 1185 Query: 503 SSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAE 562 ++ + + F + I +R A+ + L YQP + +I+G E Sbjct: 1186 YQAKNDGRNVYRFFTMEMQAHSSRIMQIESALRVALFDQQFELYYQPQTCAKSGSIIGVE 1245 Query: 563 ALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHI 622 AL RW E G +SP +FI +AE G I +G+ +++TA+ + + +S+ K + + Sbjct: 1246 ALIRWNHPEMGPVSPQEFIPVAEQSGQILAIGWWVLRTAIRQIKIWSEHG--KPCIKVAV 1303 Query: 623 NVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRI 682 N+S Q ++ I++E G+ L +E+TE+V E +++L G+++ Sbjct: 1304 NLSAVQFRYEDLPKQVMKILEEEGVSPEFLELELTESVAMANPEAVIEMMDKLVGHGIKM 1363 Query: 683 SIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAE 740 SIDDFGTG S+L +K+D F D+ I+ I L++ + IAE Sbjct: 1364 SIDDFGTGYSSLSYLKRFKVSKLKIDQSFIRDLAVDSDDRSIIEAIISLSKALGLKTIAE 1423 Query: 741 GVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 GVE++ L + C + QG+ Y K + A+D Sbjct: 1424 GVETQAQLDFLQEKQCDEIQGFYYSKALTPEAFD 1457 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 54/162 (33%), Gaps = 5/162 (3%) Query: 211 SANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKT--SAVPNNALF 268 N V + + + + + E I + ++ N + D +++ T + N F Sbjct: 448 GENGRVQYYLMTVQDVTELKHLAELNIEHQNQLNALVHTIPDLVWLKDTEGLYLACNPSF 507 Query: 269 EIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPD 328 E +F +++ +D F M +E + + Sbjct: 508 ERFFGAKEADIIGKTDYDFVDKALADFFRENDCNAMAA--EESIENEEWLTFSENGYRGL 565 Query: 329 STDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSL 370 + +K EG ++ + I++ K+ E + +L L Sbjct: 566 FSTIKTPMKNEEGQVIGVVGVARDISKRKEDEAQL-ERLTKL 606 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 726 bits (1874), Expect = 0.0, Method: Composition-based stats. Identities = 128/657 (19%), Positives = 241/657 (36%), Gaps = 45/657 (6%) Query: 141 DFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKC-----ISFTLHINGKDHDLLAVDKIH 195 D P +P + D + C + + + A + Sbjct: 69 DLIPKCQPDVILMDAKMPVLDGFEACKRIKENPVTAHIQVLIITSLEDDESINHAYEVGA 128 Query: 196 VDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEY 255 D Y+ + + +S + V FL + ++A+ QL + N+ + DS Sbjct: 129 SD----YVPKPIHWVSLQNRVQFLYK--MMVAERQLMLTAKVFENTTEGIVVTDST---- 178 Query: 256 IEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSE 315 N FE Y G++L + L T + E Sbjct: 179 ---ACITNVNPSFEAITGYDRGSVLGQ--NISILQSGRHDRRFYGKMWQTLLTAGKWQGE 233 Query: 316 MTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQ 375 + P I A++ +G + + + + +K++E LL L +D Sbjct: 234 VWNRRKNGEIYPQWV-NISAIRTGDGQTESYVGVFTDLTRIKESE----ENLLYLSGHDA 288 Query: 376 ESGFIKNMAIIESNNNQYL---------AVGIIKLCGLEAVEAVFGVDERNKIVRKLCQR 426 + + + N + AV I+ L + + G + + ++ ++ R Sbjct: 289 LTELPNRLLFHDRLNQTLVESADSGSIVAVLIVDLDRFKVINDSMGHEVGDSLLCEVATR 348 Query: 427 IAEKYAQCCDIVTFNADLYLLLCRE---NVQTFTRKIAMVNDFDSSFGYRNLRI----HK 479 + + D + ++ N ++ + Sbjct: 349 LRAICPAKATLARLGGDEFGIVLPNMTQNRDAALLAQEVLTRVAQPITISEVEFAVGASI 408 Query: 480 SAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAME 539 PL GE + A+ + + F F I + +R+A++ Sbjct: 409 GMTVYPLDGEKPSVLMRNAESAMYHAKQSGRNNFQFYRSELNTASLARILLESGLRNAVD 468 Query: 540 IGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIK 599 E L YQP +++ T ++G EAL RW E+G++SP +FI +AE+ G + +G +K Sbjct: 469 RQEFLLFYQPQMELATGKLIGMEALIRWQHPEQGMVSPGEFIPLAEETGLVIPMGQWALK 528 Query: 600 TAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITET 659 A + + + + + +N+S Q P F E + E+GL + L +E+TE+ Sbjct: 529 EACRQSKVWMDQ--TGVPLRISVNLSGIQFRLPDFTEMVMRTVGESGLPPHCLELELTES 586 Query: 660 VIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT- 718 + E + L + GV ++IDDFGTG S+L + D++K+D F + Sbjct: 587 IAMGDVEETLEKLTILSRFGVLLAIDDFGTGFSSLSYLKKFPIDTLKIDQSFVRNCTRDP 646 Query: 719 -AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 I+R +LA + VIAEGVE + L + C + QGY Y +P+ ++ Sbjct: 647 EDAAIIRAFINLAHSLNLEVIAEGVEHLEQLEFLAQESCDEIQGYFYGRPLSGDKFE 703 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 725 bits (1873), Expect = 0.0, Method: Composition-based stats. Identities = 116/536 (21%), Positives = 207/536 (38%), Gaps = 28/536 (5%) Query: 265 NALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLA 324 N F Y + L + E Sbjct: 171 NPRFTQLTGYTSAETIGKKP--HILKSGETPPEEYRKLWEIISGGGEWWGEFHNRKKNGE 228 Query: 325 FLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMA 384 ++ I + I+ + I E K AE + + YD +G Sbjct: 229 LY-WASASISPITNGNEQITHFIAFQEDITERKQAE----ETIKQMAYYDTLTGLPNRHL 283 Query: 385 IIE---------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYA-QC 434 E +N+ LAV + L + + G +++++ R+ E Sbjct: 284 FNELMHLALAQAHRHNRLLAVLFLDLDRFKHINDTLGHTVGDQLLQASAHRLKECCRRDR 343 Query: 435 CDIVTFNADLYLLLCRENV---QTFTRKIAMVNDFDSSFGYRNLRIHK----SAICEPLQ 487 + D +++L + + +++ F F ++ + P Sbjct: 344 DTVARRGGDEFIILLPDIDDVQEAVRVAQKIIDAFTQVFVLPDIELFISTCIGISIFPND 403 Query: 488 GENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVY 547 G + + + +A+ ++ S + + + + + ++R A++ E L Y Sbjct: 404 GRDTETLIKNADMAMYRAKEQGRSRYHLYTSSMDEQAFRRLTMENSLRKALQREEFSLYY 463 Query: 548 QPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRH 607 QP V+I T I+ EAL RW + E G+I P +FI +AED G I LG +++TA + + Sbjct: 464 QPKVNIKTGQIVCLEALVRWQNPEMGLILPNQFIPLAEDTGLIIPLGEWVLRTACAQNKT 523 Query: 608 FSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEH 667 + + +N SP Q +P + I+ E L L +E+TE V+ + E Sbjct: 524 WQL--LNYPPMRVAVNFSPRQFQQPRLTDMVEQILGEADLAPCWLELELTENVMLQNVEK 581 Query: 668 FYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRI 725 + +L G+ ISIDDFGTG S+L ++ ++K+D F DI I Sbjct: 582 TVQTLNRLSNLGIHISIDDFGTGYSSLSYIKKLPIQTLKIDRSFVHDINTNADDAAIAIA 641 Query: 726 IFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVK 781 + +A+ R+ VIAEGVE+ + + L L C + QGYL+ KP+P + +K Sbjct: 642 VITMAQSLRLNVIAEGVETLEQMKLLDGLNCPEMQGYLFSKPLPVAEMTTLLSNIK 697 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 724 bits (1871), Expect = 0.0, Method: Composition-based stats. Identities = 118/544 (21%), Positives = 213/544 (39%), Gaps = 27/544 (4%) Query: 256 IEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSE 315 + N F Y ++ +F + E Sbjct: 493 DAQGVITSVNPAFCTITGYLAAEVIGRKSSMFKPE--RHEATFFDAMWTSIVESGSWAGE 550 Query: 316 MTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQ 375 + + P I A++ +G E +++ + I E K E+ + ++D Sbjct: 551 VWSRRSDGDRYPQWV-TITAVRDTDGRIAEYVTLFSDITERKQQEVA----MWRQANFDP 605 Query: 376 ESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQR 426 +G + + + + + + L G + + G D ++++ + +R Sbjct: 606 LTGLANRSLLQDRLDRALAHARRHGCKVGLLFLDLDGFKWINDSLGHDVGDELLVDVARR 665 Query: 427 IAEKYAQCCDIVTFNADLYLLL---CRENVQTFTRKIAMVNDFDSSFGYRNLRIHK---- 479 + + D + ++ + +V F R R H Sbjct: 666 LNSCVRDEDTVARLGGDEFTVVVHDLADRADLGAIADKLVAVLREPFALRGARHHISGSV 725 Query: 480 SAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAME 539 P G++ + +A+ + + + + + ++R A+E Sbjct: 726 GITVFPDDGDDVQTLLRNADIAMYKAKQAGKNRAQPYAPHMQADALARVHLEADLRMAVE 785 Query: 540 IGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIK 599 L YQPIVD + A++GAEAL RW ERG+ISPL+FI +AE+ G I +G +++ Sbjct: 786 QRAFELHYQPIVDCASGALVGAEALIRWKHPERGMISPLEFIPVAEECGLIVPIGEWVLR 845 Query: 600 TAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITET 659 + + R + R L +NVS Q E E T++ E G +SL EITE+ Sbjct: 846 EVVRQRRDWLARG--HPPLRLTLNVSGVQFREAGLPELVRTLLAEFGTARSSLVFEITES 903 Query: 660 VIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT- 718 V+ +E+ + +++QG+ ++DDFGTG S+L D +K+D F D Sbjct: 904 VLMGGSENVEARMCDIKEQGICFALDDFGTGFSSLSYLKRFPVDIVKIDRSFVRDCPDDR 963 Query: 719 -AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 +V I ++A + V AEGVES + L LGC QGYL KP+ A++ Sbjct: 964 NDATLVEAIINMAHSLGLRVTAEGVESAEQREFLRALGCDYLQGYLIGKPLAADAFEALM 1023 Query: 778 KLVK 781 ++ Sbjct: 1024 APLR 1027 Score = 57.0 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 45/151 (29%), Gaps = 10/151 (6%) Query: 221 QGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLL 280 Q + + QL + I S + I D T N FE Y ++ Sbjct: 97 QSVAHVGEQQLRKLSTAIECSPASIVITDRSGTIEYV-------NPQFERSTGYTAQEVV 149 Query: 281 NASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIRE 340 + ++ L T E + A + I ++ + Sbjct: 150 GKNPRI--LKSGNRSADEYAAMWATITHGHVWRGEFENVRKDGAHYWER-ASIAPIRADD 206 Query: 341 GDAKEIISIKNSIAEMKDAEIERSNKLLSLI 371 G +++K I K AE E ++ + L Sbjct: 207 GMISGFVAVKEDITLQKRAERELRDREMKLA 237 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 724 bits (1870), Expect = 0.0, Method: Composition-based stats. Identities = 97/477 (20%), Positives = 204/477 (42%), Gaps = 24/477 (5%) Query: 319 LVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESG 378 L++ D + R+G + + + ++E + + K+ L +D +G Sbjct: 346 LIHRDGLEAAIEDSAAPIHNRDGQVAGAVIVFHDVSESRAM----ALKMAHLAQHDFLTG 401 Query: 379 FIKNMAI---------IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAE 429 + +N+ + + + L + + G +++++++ +R+ Sbjct: 402 LPNRALLTERLSRAIGQARRHNKRVGMLFLDLDYFKHINDSLGHAVGDQLLQQVAERLIV 461 Query: 430 KYAQCCDIVTFNADLYLLLC---RENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAI 482 + D +++L + ++ F + Sbjct: 462 CIRDTDTVCRQGGDEFVILLAEIEQARDAAPIAEKLLAAFAEPCLIAGNELHVSLSIGIS 521 Query: 483 CEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGE 542 P G +A + + A+ + + + + F ++I N+R A+ GE Sbjct: 522 IYPDDGMDADTVMKNADTAMYHAKANGRNNYQFFTTEMNTRAVRRLFIEGNLRRALRQGE 581 Query: 543 LFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAM 602 L YQP +D+ + ++G+EAL RW E G++ P +F+ IAE+ G I +G +++ A Sbjct: 582 FMLYYQPKIDLASGMMIGSEALIRWQDPEHGLVYPKQFVPIAEESGLIVPIGSWVLREAC 641 Query: 603 GEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIE 662 + R + + + + +N+S + F E I+KE G+ + L +E+TE+++ Sbjct: 642 RQVRAWQESGLVAVP--VSVNISAVEFRHKDFLEGVALILKETGMLPSYLELELTESILM 699 Query: 663 RINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD--IFGTAG 720 E +E L+ G++++IDDFGTG S+L +++K+D F D I Sbjct: 700 HDAESSATVLEALKTMGMQLAIDDFGTGYSSLSYLKRFPINTLKIDQSFVHDIAIDPDDA 759 Query: 721 KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 IV + + + + V+AEGVE+E+ L L C + QG+L+ +P+P + + Sbjct: 760 SIVGAMIGMGKNLKQRVVAEGVETEEQLAFLRTLHCDEGQGFLFGRPLPADEFARLL 816 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 724 bits (1870), Expect = 0.0, Method: Composition-based stats. Identities = 111/512 (21%), Positives = 208/512 (40%), Gaps = 29/512 (5%) Query: 283 SDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGD 342 K Y F + + + Y E+ N D + + G+ Sbjct: 308 LRKTSYEIFPYEVAEQMESYFRRAFAGESVTFELKLSGN------DYYITLSPI-EENGE 360 Query: 343 AKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQY 393 E++ I E K AE + + YD + E ++ Sbjct: 361 IVEMVGSMIDITERKKAE----ETIRYMAHYDSLTNLPNRTLFHEKLAEAMLKAKQKDEK 416 Query: 394 LAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENV 453 + V I L + + G + +++ + R+ + + D + + Sbjct: 417 IGVMFIDLDRFKNINDTLGHSIGDVLLQAVANRLICCLRKEDSVSRLGGDEFAIFLTGVT 476 Query: 454 QTFT--RKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRD 507 ++ S ++ I P G++ + + A+ ++ Sbjct: 477 HREAGEIAQRIITSMSESITLDHIEIFITPSIGISMYPDDGDDIEALLKHADAAMYLAKE 536 Query: 508 HMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRW 567 + + F + + + + + R +R A++ + L YQP + + T I+G EAL RW Sbjct: 537 QGKNNYQFFSEELHQVLAKKLQLERELRKALDEKQFTLHYQPKIHLQTGQIIGMEALIRW 596 Query: 568 VSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPW 627 + G+I P++FI IAE+ G I LG +++TA + + + + + +N+S Sbjct: 597 DHPDLGLIPPIQFIPIAEETGLIVPLGEWVMRTACQQTKAWQEAGFT--QLAVAVNISLR 654 Query: 628 QLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDF 687 Q + + E T+I++E GL L +EITE++ ++ + +L+ GV ISIDDF Sbjct: 655 QFMQNNLIEMITSILEETGLAPQYLELEITESMAL-NVDYTIRILNRLKALGVSISIDDF 713 Query: 688 GTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIAEGVESEDV 747 GTG S+L + D +K+D F ++ I++ I +A +I VIAEGVE+ + Sbjct: 714 GTGYSSLSYLSQFPIDRLKIDQSFLRNLNPQNQAIIKTIIHMAHNMKIAVIAEGVETHEH 773 Query: 748 ARELIKLGCVQAQGYLYQKPMPFSAWDKSGKL 779 L + C + QGY Y KP+P D ++ Sbjct: 774 VDFLKEQLCNEVQGYFYSKPLPTKEIDSFLQV 805 Score = 42.0 bits (98), Expect = 0.086, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 35/131 (26%), Gaps = 5/131 (3%) Query: 244 NYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYL 303 + SV + EK N F + L+ S + + F Sbjct: 13 SALEESSVISITDEKGIITYVNHNFCQLSKFNREELIGKSHNI--VDSGFHPRNYFKSLW 70 Query: 304 MTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIER 363 T + EM S + G + ++I I + K E Sbjct: 71 DTISRGKVWKGEMKNRGKDGTEYWLS-MTLVPFMNDSGFLYQYVAIGTDITKRKLMEESL 129 Query: 364 SNKLLSLISYD 374 + + L +D Sbjct: 130 AKTMKDL--HD 138 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 724 bits (1869), Expect = 0.0, Method: Composition-based stats. Identities = 140/728 (19%), Positives = 257/728 (35%), Gaps = 68/728 (9%) Query: 85 VILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLVDESG--RVIFADF 142 + + +++ F+ + + D R ++++ + + + +S V+F Sbjct: 119 LFIDQQLVGFITTYTDITDRKAAETALRTQHNQLQTVIESIPSAVSLFDSAGNLVLFNTA 178 Query: 143 NPSKR--PWSVASDDSN-------NSWNPAYNCFDRPGKKCISFTLHINGKDH------- 186 P P +A + N+ Y P K + H Sbjct: 179 FPRLLDVPAELAKPGVSMETLFRFNAMRGEYGP-GDPEKIVATLMERAKNPSHHYFERTR 237 Query: 187 -DLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNY 245 + ++ V L IS + + + + ++ Sbjct: 238 PNGKTLEVRGVPLAEGGFVTVYTDISE-----------RRASAEREQLAQKVYSHTPAGI 286 Query: 246 NIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMT 305 D + N Y L+ + +F L I + Sbjct: 287 IFTDDQHR-------ILSINPATTEMTGYEPFELIGQT--VFGLISLDEGISQKD-FQEQ 336 Query: 306 TRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIRE-GDAKEIISIKNSIAEMKDAEIERS 364 + SE+ + P +I + + G + I I E K AE Sbjct: 337 ISMRGSWSSELEVTQKNGSNFPAG-ARINRVDDPQSGLPAHYVWILADITERKQAE---- 391 Query: 365 NKLLSLISYDQESGFIKNMAII---------ESNNNQYLAVGIIKLCGLEAVEAVFGVDE 415 +++ + +D +G +A++ + +AV I L + + G Sbjct: 392 DRMRHIAQHDALTGLPNRLALLMRLAQLLPEARRHGWTVAVMFIDLDRFKIINDTLGHQV 451 Query: 416 RNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKI---AMVNDFDSSFGY 472 ++++R++ R++ + + D ++++ I +++ ++ Sbjct: 452 GDEMLREVACRLSNLLRETDFVARLGGDEFVIILPSISSPADAAIVSGKIISALSTAIEA 511 Query: 473 RNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENI 528 + P G + + A+ + + + F E + Sbjct: 512 EGHELHTSPSIGISIFPDDGPDGDIVLKNADTAMYHAKAAGRNNYQFFAADMNRTAAERL 571 Query: 529 WIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIG 588 I R +RHA+ EL LV+QP G EAL RW G+ISP +FI +AE+ G Sbjct: 572 NIERKLRHAIARNELSLVFQPQFRAEDTTPTGVEALLRWHHPTDGMISPARFIPVAEETG 631 Query: 589 FINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLK 648 I E+G ++ TA E + + +NVS QL F E + +GL Sbjct: 632 MIVEIGDWVLATACHEMARWINAGL--KPLRIAVNVSARQLRRRDFCETVANALTTSGLP 689 Query: 649 ANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVD 708 A L +EITE+ + + +E+L + GV ++IDDFGTG S+L D +K+D Sbjct: 690 AELLELEITESSVMENPQEAIHILERLGRMGVTLAIDDFGTGYSSLAYLKLFPIDHLKID 749 Query: 709 SQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQK 766 F DI I LA + VIAEGVE+ED L GC + QG+L+ K Sbjct: 750 RSFVADIEHDLNDRAIAFGTIALAHSLGLNVIAEGVETEDQHELLRANGCDEVQGFLFSK 809 Query: 767 PMP-FSAW 773 P+ +A+ Sbjct: 810 PLTGAAAF 817 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 723 bits (1866), Expect = 0.0, Method: Composition-based stats. Identities = 121/548 (22%), Positives = 226/548 (41%), Gaps = 29/548 (5%) Query: 247 IIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTT 306 +I +VD E + + + A+ + Y P + ++L + + + ++L Sbjct: 448 VIWTVDPE--TRCFSYVSPAMRRLSGYAPHELIDAPIERLLKPEYVAEMRERMALHLAEF 505 Query: 307 RVFRRQFSEMTELVNTLAFLPDSTDQIEALK----IREGDAKEIISIKNSIAEMKDAEIE 362 V +R+ + + L T E + R E ++ I+E + AE E Sbjct: 506 HVGKRKSEDYSVEEVELGRRDGGTVWAEVVTTLGLNRRSGRVEFRAVARDISERRAAEAE 565 Query: 363 RSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGV 413 + L YDQ +G + + LAV L + + G Sbjct: 566 ----IQRLAHYDQLTGLPNRSLVKDRFRYAASLTQRRRGQLAVMFFDLDHFKNINDTLGH 621 Query: 414 DERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKI--AMVNDFDSSFG 471 D ++++ ++ +R+ + D ++ L + ++ ++ Sbjct: 622 DFGDRLLVEVARRLESVLRGGDTVCRLGGDEFVFLLPDTDAEGAARVAAKLLEAVAQPLV 681 Query: 472 YRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEEN 527 + + P G + + + A+ + + F F +A Sbjct: 682 LDHQELTVTPSIGIAMYPDDGTDFDTLSRNADAAMYQAKREGRNGFRFFTEAMQARSTRT 741 Query: 528 IWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDI 587 + +A +RHA++ G+ L YQP V + ++GAEAL RW E G +SP +F+ IAE Sbjct: 742 LLLANALRHALDRGQFSLHYQPQVSLADGRVVGAEALLRWTHPEFGPVSPGEFVPIAESN 801 Query: 588 GFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGL 647 G I ++G +++ A+ + R + ++ +N+S Q P+ E + +++E GL Sbjct: 802 GLIAQIGEWVLREAVAQSRRWLDEGL--PPLVMAVNLSAAQFRNPNLPELVSQVIEEAGL 859 Query: 648 KANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKV 707 + + +E+TE V + ++ L +G+R+SIDDFGTG S+L +K+ Sbjct: 860 PPHQVELELTEAVAMDDPQSAVRVMDALFARGIRMSIDDFGTGYSSLGYLKRFKVGKLKI 919 Query: 708 DSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQ 765 D F DI IV I LA + +AEGVE+ D L + GC QGY + Sbjct: 920 DQSFVRDIGDDPDDKAIVSAIIHLAGSLGMLTVAEGVETLDQLDFLRQQGCDTVQGYYFS 979 Query: 766 KPMPFSAW 773 +P+P A+ Sbjct: 980 RPLPAEAF 987 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 723 bits (1866), Expect = 0.0, Method: Composition-based stats. Identities = 112/527 (21%), Positives = 211/527 (40%), Gaps = 26/527 (4%) Query: 265 NALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLA 324 N F Y +++ + E + Sbjct: 333 NTTFSTNTGYALHDIIGKKPNMHKSGKTS--RATYADMWAHLGRGESWQGEFINRRHNGE 390 Query: 325 FLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMA 384 D ++ ++ +G ++I+ I K+A+ ++ SL +D +G Sbjct: 391 ERID-LVRVSPVREADGRITHYLAIEEDITNQKNAQA----RIESLAHFDVLTGLPNRAL 445 Query: 385 IIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCC 435 + E + LAV + L + + G + + ++ +L QR+ + Sbjct: 446 LDERAQRALRLAEEDQATLAVMFLDLDHFKNINDTLGHNLGDTLLVELAQRLRAVLRRDD 505 Query: 436 DIVTFNADLYLLLCRENVQTFTRKIA--MVNDFDSSFGYRNLRI----HKSAICEPLQGE 489 + D ++LL + +KIA ++ + + + + P G Sbjct: 506 TLSRLGGDEFVLLLPGANRESAKKIAQELMRAINEPYRIGSHELNVMASIGIAVYPADGM 565 Query: 490 NAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQP 549 + + + +A+ + + + + + +R A+ +L + YQP Sbjct: 566 DFETLCKNADVAMYRAKQEGRNAYRSFTQEMQAYSTRYLQVLNALRQAIAQEQLHVHYQP 625 Query: 550 IVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFS 609 + + + ++GAEAL RW E G ISP +FI IAE+ G I ++G +++ A+ + + + Sbjct: 626 QISLISGDVIGAEALLRWHHPELGNISPAEFIPIAEESGLILQIGEWVLRVAVAQAKKWH 685 Query: 610 QRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFY 669 Q K ++ +N+S Q I+KE L +E+TE V + Sbjct: 686 QLGLDK--LIIAVNLSAVQFRHAGLPNLVMQILKEEDFPPQYLELELTEGVAMHDPQGAI 743 Query: 670 LNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIF 727 + L ++GVR+SIDDFGTG S+L + +K+D F DI IV I Sbjct: 744 AMMNSLHERGVRMSIDDFGTGYSSLSYLKQFKAYKLKIDQSFVRDISTDAEDKAIVSAII 803 Query: 728 DLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 +A+ + IAEGVE+ + L + GC +AQGY Y KP+P + ++ Sbjct: 804 GMAKNLGLQTIAEGVETAEQQAFLREEGCHEAQGYHYSKPLPAADFE 850 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 721 bits (1863), Expect = 0.0, Method: Composition-based stats. Identities = 119/574 (20%), Positives = 218/574 (37%), Gaps = 31/574 (5%) Query: 226 IAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDK 285 I + + A E L + ++ + V N F Y ++ + + Sbjct: 389 ITEQRQATELLRLNSAV--IESTHDGVVLTDLDGAIVAVNRAFTEVTGYSRDEVVGQNPR 446 Query: 286 LFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKE 345 L + + E+ P+ + A++ G Sbjct: 447 F--LQSGRHDRGFYLSMWAALKEAGHWQGELWNRRKNGELFPEWL-TLNAVRNEVGHVTH 503 Query: 346 IISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII---------ESNNNQYLAV 396 + + I+++K E ++L L +D + + ++ +AV Sbjct: 504 YVGVFTDISKLKQTE----DRLDYLAHHDPLTDLPNRLLVLSRLEHALDGAQRRGCRVAV 559 Query: 397 GIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCREN---V 453 + L + V G ++++R + R+ + + D +++L Sbjct: 560 MFLDLDRFKTVNDSLGHAAGDELLRAVAARLRGALREEDTLGRLGGDEFMVLLEHVEAPA 619 Query: 454 QTFTRKIAMVNDFDSSFGY-RNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDH 508 +V + F + P G++ + A+ + Sbjct: 620 DAAVVAKNLVEVLAAPFALSNGHEVFIRASIGISFYPDDGDDFMTLVRNADAAMYRAKAQ 679 Query: 509 MFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWV 568 + + F + + E + + +R A+E E + YQP++ + +LGAEAL RW Sbjct: 680 GRNTYGFYTEDLIRSATERLALETRLRRALEHDEFVVYYQPVLGVKDGRLLGAEALVRWK 739 Query: 569 SAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQ 628 ++SP FI +AE+ G I LG +++ A + R + + +N+S Q Sbjct: 740 PQGEPMVSPAAFIPVAEETGLIVALGEWVLRDACRQVREWIDAGYAFG--QVAVNLSAEQ 797 Query: 629 LNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFG 688 T++ E GL A L +EITE+ + EH +E+L++QGV ++IDDFG Sbjct: 798 FRRQDVSAMLATVLAETGLPATQLELEITESSLLEAGEHAVGLLERLKQQGVGLAIDDFG 857 Query: 689 TGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESED 746 TG S+L + D +K+D F DI + I I +AR + V AEGVE E Sbjct: 858 TGYSSLAYLKRFSIDKLKIDRSFVQDIADDSNDLAIASAIVAMARALDMAVQAEGVEGEA 917 Query: 747 VARELIKLGCVQAQGYLYQKPMPFSAWD-KSGKL 779 L LGC QGYL P+P ++ + +L Sbjct: 918 QLELLRGLGCGSYQGYLCSPPLPADEFEARFLRL 951 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 721 bits (1863), Expect = 0.0, Method: Composition-based stats. Identities = 105/456 (23%), Positives = 196/456 (42%), Gaps = 24/456 (5%) Query: 341 GDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNN 391 G+ + I + I+E K E E L+ + +D +G + + Sbjct: 408 GEQQVICMVLRDISERKRFEGE----LMHMAHHDALTGLPNRTLFFDRLRQGLYKKERSG 463 Query: 392 QYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE 451 + LAV + L + + G + +++++ R+ + I D + ++ E Sbjct: 464 KMLAVIYLDLDRFKIINDTLGHHTGDMLLKEVADRLRGVVRKADTISRLGGDEFTIIIDE 523 Query: 452 NV---QTFTRKIAMVNDFDSSFGYRNLRIHK----SAICEPLQGENAWSYAEKLKLAISS 504 + +++ F + F + P G+ A + A+ Sbjct: 524 IATPADSLLVAEKILHVFSAPFRLEKHEMFITASMGVTLYPNDGDTAEKLLKNADTAMYH 583 Query: 505 IRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEAL 564 ++ + + F + + + E + + +RHA+ E L YQP V+ T I+G EAL Sbjct: 584 AKEEGRNTYQFFSEEMNSRVSERLSMETGLRHALARNEFLLHYQPRVNTTTGRIVGVEAL 643 Query: 565 CRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINV 624 RW ++G+I P FI +AE+ G I +G +++ + R + + + +N+ Sbjct: 644 IRWQQPQKGLILPDAFIPLAEETGLIIPIGEWVLRNTCTQARAWQEAGF--AQMRISVNI 701 Query: 625 SPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISI 684 S Q + + I++E GL+ + L +EITE+VI E + +L++ G+ I+I Sbjct: 702 SCRQFTHDNLPDTIRGILRETGLQPSCLELEITESVIMLNPERAISLLNELKEMGISIAI 761 Query: 685 DDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGV 742 DDFGTG S+L + D +K+D F I G +V I +L + ++AEGV Sbjct: 762 DDFGTGYSSLSLLKRLPADILKIDKSFVSGIPGNKSDETLVATIINLGHNMGLGLVAEGV 821 Query: 743 ESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 E ++ L + C + QGY + KP+P K Sbjct: 822 ERQEQLHFLEERNCQEVQGYYFSKPLPAETLQPLLK 857 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 721 bits (1863), Expect = 0.0, Method: Composition-based stats. Identities = 125/614 (20%), Positives = 226/614 (36%), Gaps = 39/614 (6%) Query: 185 DHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIA-----------KNQLAR 233 D D++ ++ + + + + + ++ F +I K Sbjct: 415 DTDVMLSGVPKMNYETDLVIDGVHRTTVTSKLPFTDSDGRVIGVLGSYTDITERKRADLA 474 Query: 234 EKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAF 293 +L + + N I + E N F+ Y ++ +L L Sbjct: 475 LRLQSRALDASVNAILITE-PSKEGNLIEYVNPAFKRITGYDPQEVIGQDCRL--LQRDD 531 Query: 294 IIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSI 353 + R + + A + I + +G I++ N + Sbjct: 532 RDQEGIAAIRQALAANREVSAVLRNYRKDGALFWNQLY-IAPVPDADGQTTHHIAVINDV 590 Query: 354 AEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGL 404 A I +L +YD + + + +++ +AV I L G Sbjct: 591 T----ALIRYQEQLEYQANYDSLTRLPNRNLLRDRLQHALIVAQRHHKGVAVVFIDLDGF 646 Query: 405 EAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQT---FTRKIA 461 + V G ++++ + R+A + D ++++ + V Sbjct: 647 KNVNDSLGHSVGDRLLSVVADRLARCARASDTVARHGGDEFVIVMTDTVDEQSLIAWMER 706 Query: 462 MVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCD 517 + + A P G++A + +K LA+ +D + F F Sbjct: 707 VRASISEPVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADLAMYRAKDMGRNTFQFYQ 766 Query: 518 DAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISP 577 + + R +R A+ E L YQP VDI T ++G EAL RW E G+I P Sbjct: 767 PEMNVSAGARLNLERRLRRALRDNEFLLHYQPQVDIETGQVVGMEALVRWHDPEVGLIPP 826 Query: 578 LKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHER 637 +FI +AE+ G I L +++ A + + + + +N+S Q + + Sbjct: 827 SQFIPVAEESGLIGPLSEWVLREACRQNKAWQDEGL--PPARVSVNLSARQFQQRDIAKL 884 Query: 638 FTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRF 697 +++E GL L +E+TE+ I R E + +L G+ ++IDDFGTG S+L Sbjct: 885 VMQVLEETGLDPQYLELELTESTIMRNAEEAVSMLNELHALGIGLAIDDFGTGYSSLSYL 944 Query: 698 YEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLG 755 D +K+D F DI I I LA + VIAEGVE+ L + Sbjct: 945 KRFPVDRLKIDRSFVSDIGESSDDETITSAIIALAHSLNLQVIAEGVETSTQLDFLKERA 1004 Query: 756 CVQAQGYLYQKPMP 769 C + QGY + KP+P Sbjct: 1005 CDEMQGYFFAKPLP 1018 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 721 bits (1861), Expect = 0.0, Method: Composition-based stats. Identities = 114/535 (21%), Positives = 215/535 (40%), Gaps = 26/535 (4%) Query: 256 IEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSE 315 + + N FE Y G ++ + ++ L + E Sbjct: 426 DARARILRVNPAFETITGYSAGEVVGRTPRM--LQSGRHDGAFYRRFWRALETEGHWSGE 483 Query: 316 MTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQ 375 + P + A+K +G +SI I+E K AE ++ L +D Sbjct: 484 IWNRHRDGHIFPAW-QSVSAVKGPDGSTTHYVSIFTDISEFKRAEA----QIRYLSYHDD 538 Query: 376 ESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQR 426 +G + + +A+ ++ L + + G ++++ ++ +R Sbjct: 539 LTGLPNRAYFQARLDQLIEAAARDRKQIALVVLDLDRFKTINDSLGHSVGDELLCQVAER 598 Query: 427 IAEKYAQCCDIVTFNADLYLLLC--RENVQTFTRKIAMVNDFDSSFGYRNLRI----HKS 480 I + Q + D ++++ + V+ AM++ + Sbjct: 599 IQDCTGQGDFVARQGGDEFVVILADSDAVRAARVANAMISAIAKPAVAGGRTLIVTPSLG 658 Query: 481 AICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEI 540 P ++ S + A+ + + + F E + + + A+ Sbjct: 659 ISLYPHDAGDSESLIKSADAAMYHAKSLGRNTYQFFSAEMSAVATERLALENALHQALSN 718 Query: 541 GELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKT 600 GE L YQP +++ +R ++G EAL RW E G + PL+FI +AE+ G I+ +G +++ Sbjct: 719 GEFRLYYQPQIEVCSRRLIGLEALIRWRHPEVGWVPPLRFIPLAEETGIIHRIGRWVLEE 778 Query: 601 AMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETV 660 A + R + + +N+SP QL + F E+ ++ L L +E+TET Sbjct: 779 ACRQQREWQAAGLCIVP--VAVNLSPLQLQKDDFPEQVEALLSGCRLAPGLLELELTETA 836 Query: 661 IERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GT 718 + R + +L+++G R SIDDFGTG S+L D +K+D F D+ Sbjct: 837 VMRDVGRMSDMLRKLKERGTRFSIDDFGTGYSSLGYLNRFPVDKLKIDQSFIRDVTRRED 896 Query: 719 AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 I R I LA+ + V+AEGVE+ + L + GC AQG+ + +P+P Sbjct: 897 HAAITRAIIALAKQLHLKVVAEGVETAEQLEFLERAGCDGAQGFYFSRPVPADEI 951 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 721 bits (1861), Expect = 0.0, Method: Composition-based stats. Identities = 112/474 (23%), Positives = 200/474 (42%), Gaps = 22/474 (4%) Query: 316 MTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQ 375 + L + ++ GD I + N + AE +L+ S+D Sbjct: 220 VLNLERENGAQQSVELFLAPVENESGDVTHFIGVLNDVTARTHAEK----RLIHQASHDA 275 Query: 376 ESGFIKNMAIIES------NNNQYL-AVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIA 428 +G + + + L AV + L + V +G + ++R++ R++ Sbjct: 276 LTGLPNRNLLNDRITHAIARSRGRLTAVMFLDLDRFKLVNDSYGHAVGDALIREVANRVS 335 Query: 429 EKYAQCCDIVTFNADLYLLLCRENV---QTFTRKIAMVNDFDSSFGYRNLRI----HKSA 481 + D +++L + + + S +L + Sbjct: 336 ACLRAGDTVARLGGDEFVVLLEDLASIEDAARLAAKLRDRLSESVRIGSLELPLSASIGV 395 Query: 482 ICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIG 541 P G + + +A+ ++ + + F + + + +R A+ G Sbjct: 396 ALAPRDGRDPEMLLKNADIAMYRAKERGRNNYCFYGPEMDHHARRRLTVESELRRALAGG 455 Query: 542 ELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTA 601 EL YQP VD+ T A+ GAEAL RW ER ++ P +FI +AE+ G I LG Q+++ A Sbjct: 456 ELEAHYQPQVDLATGALTGAEALVRWRHPERCLLLPGEFIAVAEETGLIVPLGEQVLRAA 515 Query: 602 MGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVI 661 + + + + D + +N+S Q + E+ I+ E G A L +EITE+V Sbjct: 516 CRQSTRWREAG--RPDLKVAVNLSGHQFRQHDLVEQVCDILAETGAHAAQLELEITESVA 573 Query: 662 ERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTA 719 + + LR+QG+ ++IDDFGTG S+L D++K+D F I G Sbjct: 574 MADADGSVATLAGLRRQGIALAIDDFGTGYSSLSYLKRFPIDTLKIDRSFIQGIPADGDD 633 Query: 720 GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 IV+ I +AR R+ ++AEGVE+ L+ GC QG+L+ + MP + Sbjct: 634 TAIVQAIIAMARSLRLSLLAEGVETPAQREFLVAQGCRSGQGFLFGRAMPAEDF 687 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 720 bits (1860), Expect = 0.0, Method: Composition-based stats. Identities = 118/578 (20%), Positives = 222/578 (38%), Gaps = 48/578 (8%) Query: 220 KQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNL 279 ++ I A ++E + + +++G I N F Y + Sbjct: 611 EEALRIAATAFESQEGMTVTDAQGAVLRI----------------NRAFTEITGYSADEV 654 Query: 280 LNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIR 339 + + +L L + R E+ P+ I A+K Sbjct: 655 VGHNPRL--LQSGRHDKAFYAAMWESIRRTGSWQGEIWNRRKNGEAYPE-LLSITAVKEN 711 Query: 340 EGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NN 390 G + I K AE +++ +L +D ++G +++ + Sbjct: 712 GGIVTHYVGTFMDITRRKAAE----DEIRNLAFFDLQTGLPNRRLLLDRLQQALAASARH 767 Query: 391 NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR 450 + A+ +I L + + G D+ + +++++ QR+A + + D ++++ Sbjct: 768 RRQGALLLIDLDNFKTLNDTLGHDKGDLLLQQVAQRLASCVHEGGTVARLGGDEFVVMLE 827 Query: 451 ENVQTFTRKI--------AMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKL 498 + ++ ++ Q E ++ Sbjct: 828 NLSEHLEAAATQAETLAKRILASLKQTYSLDGYEYQSTASIGITLFSEQQETTEDLLKRA 887 Query: 499 KLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAI 558 LA+ + + F D + + +R A+ E L YQ VD + Sbjct: 888 DLAMYQAKAVGRNTLRFFDPEMQAVVTSRAALEAGLRRAVTSDEFLLYYQAQVDGQ-GHL 946 Query: 559 LGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDF 618 G EAL RW ERG+++P +FI +AED G I LG ++ A + ++ R Sbjct: 947 TGCEALLRWQHPERGLVAPGEFIALAEDTGLILPLGRWVLDAACTQLAQWATR-PEMAHL 1005 Query: 619 LLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQ 678 + +NVS Q ++ F + T++ G L +E+TE+++ E + L+++ Sbjct: 1006 TVAVNVSVRQFHQADFVNQVLTVLDSTGTNPQRLKLELTESLLIGDVEDVIAKMSILKEK 1065 Query: 679 GVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD--IFGTAGKIVRIIFDLARYNRIP 736 GV S+DDFGTG S+L + D +K+D F + I I R++ L + Sbjct: 1066 GVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQGFVRNILIDPNDAAIARMVIALGDSLGLA 1125 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 VIAEGVE E L +LGC QGYL+ +P+P ++ Sbjct: 1126 VIAEGVEIEAQRDFLARLGCHACQGYLFCRPLPLDQFE 1163 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 720 bits (1859), Expect = 0.0, Method: Composition-based stats. Identities = 119/596 (19%), Positives = 228/596 (38%), Gaps = 44/596 (7%) Query: 213 NDEVLFLKQGHEIIAKNQLAREKLII----YNSEGNYNIIDSVDTEYIEKTSAVPNNALF 268 E + + I + + +L I ++S I D+ T + N+ F Sbjct: 450 KGEFIGFRTSGRDITERKQVEAELRIAAVAFDSMEPMMITDASAT-------ILRVNSAF 502 Query: 269 EIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPD 328 Y ++ + ++ L E+ + P Sbjct: 503 TECTGYTAEEIVGQTPRV--LRSGRHDDAFFQEMWEEIHSAGGWQGEVWDRRKNGEVYPK 560 Query: 329 STDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES 388 I A+ G + + I E K AE ++ L +D + +++ Sbjct: 561 WL-TISAVMSDNGTVSHYVGTHHDITERKIAE----ERIKELAFFDALTRLPNRTLLLDR 615 Query: 389 ---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVT 439 N A+ I L + + G D+ + +++++ +R+A+ + + Sbjct: 616 LRQAITASARNEACGALLFIDLDHFKTLNDTLGHDKGDLLLQQVARRLADSVLESDTVAR 675 Query: 440 FNADLYLLLC------RENVQTFTRKI--AMVNDFDSSFGYRNLRI----HKSAICEPLQ 487 D ++++ R+ T + ++ S + + A Sbjct: 676 VGGDEFVVVLGNLHKNRQEAANQTEAVGERILAVLGSPYHLGKIEYRTSASIGATVFRGH 735 Query: 488 GENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVY 547 + ++ LA+ ++ + F D + + + +R+A+E + L Y Sbjct: 736 QASIDELLKQADLAMYKSKERGRNAVRFFDPDMQTVVVQRAALEAGLRNAIEDNQFLLHY 795 Query: 548 QPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRH 607 Q V + GAEAL RW +RGI+ P +FI +AE+ G I LG +++ A + Sbjct: 796 QAQV--VGTRVTGAEALVRWQHPQRGIVPPAEFIPLAEETGLIVALGSWVLEAACAQLAR 853 Query: 608 FSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEH 667 ++ R + +NVS Q + F + TI+ G + + L +E+TE+V+ + Sbjct: 854 WAAR-PDMAHLTIAVNVSVQQFRKADFVDNVLTIIGRTGARPDRLKLELTESVLVDNVQD 912 Query: 668 FYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD--IFGTAGKIVRI 725 + L+ +G+ ++DDFG G S+L + D +K+D F D + I R Sbjct: 913 IIEKMSALKAKGIVFALDDFGIGYSSLSYLKRLPLDQLKIDRSFVRDVLVDSNDAVIART 972 Query: 726 IFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVK 781 I LAR + VIAEGVE+E L GC QGY + +P+P ++ V+ Sbjct: 973 IVALARSLGLGVIAEGVETEAQRDFLAAAGCYAYQGYYFCRPLPIEDFEALLNNVE 1028 >UniRef50_A8UR98 Sensory box/GGDEF family protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UR98_9AQUI Length = 959 Score = 719 bits (1857), Expect = 0.0, Method: Composition-based stats. Identities = 156/786 (19%), Positives = 308/786 (39%), Gaps = 73/786 (9%) Query: 61 IERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVV 120 + + LK + ++ R+V + ME++ ++ N + + +++VV Sbjct: 174 VSIVPMFLKSVHQAKEGEKDFVRSVRVDMEIISDNLEESILYWLNIHLNAVKELANRLVV 233 Query: 121 YHQEQVNGPLVD-ESGRVIFADFN---------------PSKRPWSVASDDSNNSWNPAY 164 + E D E+ R F++F+ P P +N ++ P Y Sbjct: 234 WGPENREQLQRDTEAIRRAFSEFHACYIADSEATAITFYPEINPKGKYMIGTNFNYRPYY 293 Query: 165 NCFDRPGKKCISFTLHINGKDHDLLAVDKIHVD-----------LNWRYLNEYLDQISAN 213 R K + ++ + V L L + + S Sbjct: 294 KEVKRTHKHTFTQVFIAKFALKPVVGIAVPAVKEGKFLGYAYCGLRLDRLRSVVREFSLK 353 Query: 214 DEVLF--LKQGHEIIAKNQLAREKLIIYNS-----EGNYNIIDSVDTEYIEKTSAVPNNA 266 + V + + + II N+ + L + ++++ E+ K P + Sbjct: 354 EGVFVTLIDKKNRIIVSNKEGVKPLQEFERGELKITSFGLVMETFRGEHDSK-FNPPADR 412 Query: 267 LFEIYFYYPGG----------------NLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFR 310 L+ +FY L F I + L+ +L+ + Sbjct: 413 LYHSFFYRENKLREDVGWTVVMEVSIVPYLKELMSKLNTNFLSIYALALLSFLLARFLTS 472 Query: 311 RQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSL 370 + +L + + + + ++ L + + EI + S +M + + +L + Sbjct: 473 ISTKPVQKLADAIGVITRNLEKNPPLNLPGTNIAEIKELTESFRDMANKAMSYLEELKKM 532 Query: 371 ISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVR 421 +D +G + + N +A+ I L + V G D ++I+ Sbjct: 533 AYFDPLTGLPNRTLLRDRIESAIHFANRNGSKVAILFIDLDYFKTVNDTLGHDVGDRILV 592 Query: 422 KLCQRIAEKYAQCCDIVTFNADLYLLLCREN---VQTFTRKIAMVNDFDSSFGYRNLRI- 477 ++ +R++ + + + F D ++ + + +++ F + F I Sbjct: 593 QVAKRLSSVFRETDTVARFGGDEFVAVIPDVRDLKDVVQVAERILSLFSTPFEANGEDIY 652 Query: 478 ---HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNI 534 P GEN + +A+ ++ S F F + ++ E + + + Sbjct: 653 LSASVGIAVYPDNGENPTELIKNADMAMYRAKEEGKSNFSFFTEEMNSKAVEILSVKNKL 712 Query: 535 RHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELG 594 A+E GE L YQPI + +I+G EAL RW +RG++SP KF+ I E++G + E+G Sbjct: 713 HKALERGEFLLYYQPIYSLGDNSIVGLEALLRWRDPDRGLVSPAKFMPILEELGLVKEVG 772 Query: 595 YQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCV 654 ++ A + R + R + +N+SP Q + +F +R I + + + Sbjct: 773 RWVMGEAFKKSREWGDRYG----IYVSVNISPRQFMDRNFVKRVLQIASDTNANNEHVVL 828 Query: 655 EITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD 714 EITET + R E +++LR +G ++++DDFGTG S+L + D IKVD FT Sbjct: 829 EITETSLMRNPEESVSILKRLRAKGFKVAVDDFGTGYSSLAYLKRLPIDIIKVDMTFTQG 888 Query: 715 IFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 + + IV + L++ + +AEGVE+ + L +LGC AQGYL+ KPM Sbjct: 889 MVKSNVDRSIVMAVIGLSKSLGLKSLAEGVETREQVNILRELGCDLAQGYLFGKPMKEEE 948 Query: 773 WDKSGK 778 + + Sbjct: 949 AEALIR 954 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 719 bits (1856), Expect = 0.0, Method: Composition-based stats. Identities = 116/596 (19%), Positives = 224/596 (37%), Gaps = 40/596 (6%) Query: 212 ANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVD--TEYIEKTSAVPNNALFE 269 A E + E I + + A E L + + D Y + N F Sbjct: 287 AKGEPFAIVTSCEDITERKQAEEALRKSEERYRIVLESAPDPVVVYDTEGKVAYFNPAFS 346 Query: 270 IYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDS 329 F + + + + + + T + Sbjct: 347 RVFGWTLDESIGRNIDF----LPVENVPENKLIFEKINCGKTLSGIETYCLTKDGKKVGV 402 Query: 330 TDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII--- 386 + I I E K E ++ L +D +G + + Sbjct: 403 NISGAGFFDNHDKLQGSIITLQDITERKKTE----EEIKFLAYHDVLTGLLNRKSFYTRL 458 Query: 387 ------------ESNN--NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYA 432 + A+ + + + V G D +++++ + R+ Sbjct: 459 EDELIRSYSYDGDRRRIKGHKWALFFLDVDRFKYVNDTLGHDVGDELLKVVAVRLKNCLR 518 Query: 433 QCCDIVTFNADLYLLLC---RENVQTFTRKIAMVNDFDSSFGYRNLR----IHKSAICEP 485 + I D + ++ ++ + ++ + P Sbjct: 519 KSDYIFRLGGDEFTIILNDLTDDTDMAKVAQKIRKAIARPCRIKDHELYITVSIGISIYP 578 Query: 486 LQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFL 545 G++ + + +A+ + ++ + F + + E + + N+R+A++ +L + Sbjct: 579 DDGDDVETLVKNADIAMYAAKEENQ-GYRFFIEEMNRKTLERMMLENNLRNALQHDQLII 637 Query: 546 VYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEF 605 YQP+VD +T I+G EAL RW E G+ISP +FI +AE+ G I +G +++ A + Sbjct: 638 YYQPLVD-STNQIVGMEALLRWHHPELGLISPSQFIPLAEETGLIVPIGKWVLRCACQQA 696 Query: 606 RHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERIN 665 R + + + F + +N+S Q EP E I++ L + L +E+TE+ I Sbjct: 697 RKWHEMGYTR--FYVAVNLSVRQFREPDLVETIEQILEATDLPPDCLKLEVTESGIMEHP 754 Query: 666 EHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIV 723 E ++ LR +G+ SIDDFGTG S+L D++K+D F D +I+ Sbjct: 755 EQAIAKMKMLRAKGIHFSIDDFGTGYSSLSYLKRFPIDTLKIDRSFVIDSTTNKDDQEII 814 Query: 724 RIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKL 779 + I +AR + +AEGVE+++ LI GC QGY + +PMP ++ + Sbjct: 815 KTIIAMARNLGMDTVAEGVEAKEQQDFLIHHGCHMMQGYYFGRPMPAEKFEDMLQT 870 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 718 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 117/569 (20%), Positives = 217/569 (38%), Gaps = 31/569 (5%) Query: 222 GHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLN 281 + I +L +L++ + N ++ N F Y + Sbjct: 942 TNRNITSRKLIENELVLSSQV--LNSMNEAVVVAGLDYKIRSVNPAFSAITGYSERQI-- 997 Query: 282 ASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREG 341 +DK L + E+ + +I + +G Sbjct: 998 -TDKYLVHLAYKQQRELFNSIEQQLLRHKHWVGEIWIRNKQRKAILVWL-EINQVIDIKG 1055 Query: 342 DAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQ 392 + +++ I E K AE + L L S+D +G + N Sbjct: 1056 ETSHFVAVFTDITERKKAEQD----LRFLASFDTLTGLPNRTLFQDRLNHAITQAHRANN 1111 Query: 393 YLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCREN 452 +A+ + L + + G + +++ +R+ + + D + ++ Sbjct: 1112 IVALLFLDLDRFKHINDSMGHHVGDLLLKAAAKRLQNAVREGDTVARLGGDEFTIILEGV 1171 Query: 453 VQTFTRK---IAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSI 505 +T ++ F + F + + P +NA S + A+ Sbjct: 1172 AKTKAATLISEKVLRAFQTPFLLEDKSLTISTSIGISLYPNDADNADSLIKFADTAMYHA 1231 Query: 506 RDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALC 565 + + F F ++ + ++ A+ EL LVYQP + ++ G EAL Sbjct: 1232 KSLGRNNFQFYTHKLNEIATRHVLLEAGLKQAIHRNELSLVYQPKFSLRDGSLTGLEALL 1291 Query: 566 RWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVS 625 RW E G ISP++FI +AE+ G IN++G+ +I A + ++ ++ + +N+S Sbjct: 1292 RWHHTELGPISPVEFIPLAEETGIINQIGHWVINHACQQLAEWNALGF--NNISMAVNLS 1349 Query: 626 PWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISID 685 QL + +GL A SL +E+TE++I + + +L+ G+ I+ID Sbjct: 1350 ARQLK-ADIISTIEVALAVSGLPAQSLELELTESMIMGNPQDSVSILSKLKALGLTIAID 1408 Query: 686 DFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNRIPVIAEGVE 743 DFGTG S+L D++K+D +F DI I I LA + V+AEGVE Sbjct: 1409 DFGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVE 1468 Query: 744 SEDVARELIKLGCVQAQGYLYQKPMPFSA 772 ++ L GC + QG+L KP+ Sbjct: 1469 TQAQLNFLGLQGCDEVQGFLLSKPLSAKD 1497 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 718 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 113/537 (21%), Positives = 205/537 (38%), Gaps = 28/537 (5%) Query: 256 IEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSE 315 V N F Y + L L E Sbjct: 517 DASNHIVMVNRAFTDITGYSAQEAIGRQPSL--LSSGRQPPAFYQKMWQQLAQRGHWAGE 574 Query: 316 MTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQ 375 + P+ I L+ G +++ + I+E K+ E + + +D Sbjct: 575 IWNRRKDGTIYPEWL-SISLLRDEAGQVSHHVALFSDISERKEQEAH----IRHMAEHDF 629 Query: 376 ESGFIKNMAIIESNN---------NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQR 426 + I + LAV + L + + G +++++++ QR Sbjct: 630 LTDLPNRALIHDRLAQAIRAAARQKNRLAVLFLDLDHFKNINDTLGHAHGDELLKQVAQR 689 Query: 427 IAEKYAQCCDIVTFNADLYLLLCRENV---QTFTRKIAMVNDFDSSFGYRNLRI----HK 479 + + D ++L+ E + +++D F + Sbjct: 690 LQHTVRGSDTVGRNGGDEFVLIVPELASPAEAAQLAQRLLDDLRRPFQIDGQALAISTSI 749 Query: 480 SAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAME 539 P G LA+ + + + F ++ E + + ++R A+E Sbjct: 750 GISLFPDNGSELQELLVSADLAMYHAKAQGRNRYQFFTPELNAQVAERLTLENHLRQALE 809 Query: 540 IGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIK 599 +L+LVYQP I+ R ++G EAL RW E+G+ISP +FI +AE+ G I E+G ++ Sbjct: 810 RQQLYLVYQPQFAIDNRRLVGCEALLRWQHPEQGLISPARFIPLAEETGLIVEIGRWVLD 869 Query: 600 TAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITET 659 A + + + + +NVS QL +P + + L + L +E+TE+ Sbjct: 870 EACRQAAAWLAAGT---PLRVAVNVSARQLGQPDLLAEVEAALARHRLPSCWLELEVTES 926 Query: 660 VIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG-- 717 + E +++ +++G+ +++DDFGTG S+L +PD IK+D F ++ Sbjct: 927 TLMEDAEQAVRHLQAFKERGIHLAVDDFGTGYSSLTYLKRFSPDLIKIDRAFVMNLPDNR 986 Query: 718 TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 IV I LA + +AEGVESE+ L + GC QGYL +P Sbjct: 987 DDAAIVSAIVQLAEALGMQTLAEGVESEEQLDFLAQAGCDVVQGYLTGRPQSAGELT 1043 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 121/577 (20%), Positives = 224/577 (38%), Gaps = 33/577 (5%) Query: 219 LKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGN 278 L+ + +I+++ G +I + + N ++ Y Sbjct: 699 LQDVTRRKMAEEGLVLAKMIFDNAGEAIVITDAQGDITD------VNPAYQRIMGYTRDE 752 Query: 279 LLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKI 338 ++ + + L E+ + + P I+A++ Sbjct: 753 IVGQNPSI--LKSGRHDEQFYEQMWNEMLSEGHWQGEIWDRRKSGEIFPKWL-TIDAIRD 809 Query: 339 REGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------N 389 +G + + I + K+ E +L L YD + + Sbjct: 810 EQGVISNFVGLFMDITQQKETE----EQLEKLAYYDPLTELPNRALFRDRLEQEMRLSAR 865 Query: 390 NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC 449 + L + I L + V G D+ + ++ ++ RI + D + ++ Sbjct: 866 GGKSLGLFFIDLDRFKYVNDSLGHDKGDDLLIQVAGRIKHHLRTSDTVARLGGDEFTVIL 925 Query: 450 R--ENVQTFTR-KIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAI 502 E R A+V F + + P GE+ + + A+ Sbjct: 926 PGIEQTNDVARIAGAIVKSLGEVFVLQGHEVFIGGSIGIAMHPDDGEDYETLTKHADTAM 985 Query: 503 SSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAE 562 ++ + F + + R +R A+E +L L YQP VD+ I G E Sbjct: 986 YRAKEEGRGTYKFFTSDMNEINGRRLSLERALRQAVECNQLTLHYQPKVDVKQCRITGME 1045 Query: 563 ALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHI 622 AL RW E+G++SP+ FI IAE+ G I +G +++ A + + ++ + + I Sbjct: 1046 ALVRWNHPEQGLVSPVDFIPIAEETGLIITIGEWVMQQACMDAKRLARS--SRHPLQVAI 1103 Query: 623 NVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRI 682 N+S Q + + ++++GL L VEITE++ I +LR GV++ Sbjct: 1104 NLSAKQFQDALLVAKLERSLQQSGLAPELLEVEITESLAMGDVNRTIEQIGELRALGVKV 1163 Query: 683 SIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD--IFGTAGKIVRIIFDLARYNRIPVIAE 740 SIDDFGTG S+L ++ +++K+D F D + IV I +A + V+AE Sbjct: 1164 SIDDFGTGYSSLSYLKKLPLNALKIDKSFIQDLYLDSDDTAIVSSILSMASALGLSVVAE 1223 Query: 741 GVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 GVE++ L + C QGY + KP+PF A++K Sbjct: 1224 GVENQAQIHFLCEKECPTIQGYFFSKPLPFEAFEKFL 1260 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 132/567 (23%), Positives = 234/567 (41%), Gaps = 35/567 (6%) Query: 227 AKNQLAREKLIIYNSEGNYNIID-SVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDK 285 A + L + L + S + I D EY+ N +F Y +L + + Sbjct: 391 ASDSLLKLSLAVEQSPNSIVITDLDGKIEYV--------NNMFIKVTGYSRDEVLGQNPR 442 Query: 286 LFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKE 345 + + +T E+ + +S I +K +G Sbjct: 443 ILKSGKTPQTTFKEMWAHLTRGDI--WHGEIINRRKDKSIYIES-ATITPVKQADGKITN 499 Query: 346 IISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI---------IESNNNQYLAV 396 ++IK I E K AE +L +DQ +G + + +N+Q L V Sbjct: 500 YVAIKEDITEKKKAEAYT----ENLAYFDQLTGLPNRRMLQAQVKYRLNMAQSNHQPLTV 555 Query: 397 GIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTF 456 + L + + G ++++ K+ +RI + + + D +++L Sbjct: 556 MFLDLDNFKNINDSLGHTVGDQVLIKIAKRIKKAIREVDTVSRLGGDEFIMLFPNTDANA 615 Query: 457 TRKIA--MVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMF 510 IA ++ + + + + P G + + + + A+ +++ Sbjct: 616 AMHIATTLIQEISKASVVEHNELTITPSIGIAIYPNDGNDFKTLLKNAETAMYRVKNDSR 675 Query: 511 SEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSA 570 + F F N+ + +RHA++ EL L YQP + + I+GAEAL RW Sbjct: 676 NGFHFVTPEMQLSASRNLQLENALRHALKRNELQLYYQPQISTSNGQIIGAEALLRWHHP 735 Query: 571 ERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLN 630 E G+ISP +FI IAE G I E+G +++TA+ + +++ ++ +N+S Q Sbjct: 736 ELGMISPAEFIPIAESSGQIIEIGEWVLRTAIRQTKNWMDDGFT--PMIIAVNLSVVQFR 793 Query: 631 EPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTG 690 + + T I+ E L L +E+TE V E + +QG+R+SIDDFGTG Sbjct: 794 QKNLLTLITDILAEVQLPNEYLELELTEAVTMHDPESVINVMNTFHEQGIRMSIDDFGTG 853 Query: 691 LSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVA 748 S+L + +K+D F DI IV I D+A + IAEGVE+ + Sbjct: 854 YSSLSYLKKFKVYKLKIDQSFIRDISNDPDDRAIVSAIIDMASNLGLQTIAEGVETAEQL 913 Query: 749 RELIKLGCVQAQGYLYQKPMPFSAWDK 775 L GC + QGY + KP+P +++ Sbjct: 914 AFLRLHGCHEVQGYYFSKPLPSVEFEQ 940 >UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K2_9PROT Length = 925 Score = 718 bits (1853), Expect = 0.0, Method: Composition-based stats. Identities = 119/596 (19%), Positives = 227/596 (38%), Gaps = 48/596 (8%) Query: 205 EYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPN 264 L + + I A + E +II +S G + Sbjct: 345 SSLKHARTHVRAQLAETDLRIAATAFESEESMIITDSRG----------------IILKV 388 Query: 265 NALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLA 324 N +F Y + + L + + E+ + Sbjct: 389 NQVFTATTGYTSEEAVGKTPSLLKTD--RHSAEFYHEMWRQIKQTGKWQGEIWDKRKNGE 446 Query: 325 FLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMA 384 P I A+K + G + + E K AE K++SL YD +G Sbjct: 447 IYP-KLLNIYAVKSKNGVVTHYVGSYTDLTERKMAE----EKIISLAFYDTLTGLPNRRL 501 Query: 385 IIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCC 435 +++ + A+ I L + + G D + +++++ R+ + Sbjct: 502 LLDRLNYALASGLRTGKNGALLFIDLDKFKTLNDTLGHDIGDLLLKQVAHRLKACVREID 561 Query: 436 DIVTFNADLYLLLCRE----NVQTFTRKI----AMVNDFDSSFGYRNLR----IHKSAIC 483 + D ++++ + +V+ + ++ + + Sbjct: 562 TVARIGGDEFVVMLEDLNIESVEAAAQTEVIGEKILAALRMPYQLLTNEFHSSVSIGISL 621 Query: 484 EPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGEL 543 G++ ++ +A+ + ++ F D + I + +R A+ +L Sbjct: 622 FSNNGQSQDEPLKQADIAMYQAKKSGRNKLRFFDQRMQDTISSRANLEAELRKALANEQL 681 Query: 544 FLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMG 603 L YQ VD +GAE L RW+ GIISP +F+ +AE+ G I +G +++TA Sbjct: 682 QLHYQIQVDSA-HQTIGAEVLLRWIHPVNGIISPAQFVPVAEETGLILPIGLWVLETACA 740 Query: 604 EFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIER 663 + + + +L INVS Q ++ F ++++ + + L +E+TE ++ Sbjct: 741 QLKKWQDN-PATAQLILAINVSARQFHQNGFATEVRSVIERHDINPALLKLELTEGMLLN 799 Query: 664 INEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGK 721 + + L++ GV+ S+DDFGTG S+L+ + +K+D F D+ Sbjct: 800 NLDDTIATMRSLQEFGVQFSLDDFGTGYSSLQYLKRLPLAQLKIDQSFVRDLATGYNDQA 859 Query: 722 IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 IVR I +A + VIAEGVE+E + L+K C QGYL+ KPMP ++ Sbjct: 860 IVRTIIAMAHSLNLNVIAEGVETEIQRQILLKNQCSHFQGYLFGKPMPIEQFESLL 915 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 716 bits (1850), Expect = 0.0, Method: Composition-based stats. Identities = 110/530 (20%), Positives = 208/530 (39%), Gaps = 28/530 (5%) Query: 265 NALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLA 324 N F Y ++ + L L T + E+ + Sbjct: 392 NPRFSQVTGYASKEVIGKKPSI--LKSGRTPAALYDSLWETISAGKEWRGELMNRKKDGS 449 Query: 325 FLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMA 384 I ++ G IS+K I+ K+ E +L+ +YD +G + Sbjct: 450 LF-WQHAIISPIRDNSGVITHYISVKEDISIRKEYE----ERLVRQANYDALTGLPNRIL 504 Query: 385 IIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCC 435 ++ N+ +A+ ++ L + V G + ++++ R+ + + Sbjct: 505 AMDRLKQAIAQAQRYNRKVALMLLDLDDFKKVNDTLGHAAGDLLLKEAALRLVDCLREGD 564 Query: 436 DIVTFNADLYLLLCRENVQ---TFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQG 488 + D ++LL + ++ + F P Sbjct: 565 TVARLGGDEFVLLLPDLTDTSSAEVVAEKILAACNQPFDVGGHEAYIAGSIGIAIFPDDE 624 Query: 489 ENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQ 548 + A+ + F + E++ + +RHA+E E+ + YQ Sbjct: 625 RDPILLMRNADAAMYRSKREGKGVFRYFTPEMNARALEHMRMESQLRHAIERNEMKVHYQ 684 Query: 549 PIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHF 608 P+VD T ++GAEAL RW + G +SP +FI +AE+ G I +G +++TA + + Sbjct: 685 PLVDSGTGRLVGAEALLRWSNPVLGEVSPEQFIPLAEETGLILSIGAWVLRTACRDAASW 744 Query: 609 SQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHF 668 + + + +N+S Q + E + + E+GL L +E+TE+V+ + Sbjct: 745 QR---PDHEIFVAVNISGKQFQKRTLVEIVRSSLNESGLPPACLELELTESVLLEHTQET 801 Query: 669 YLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRII 726 I++L GV +IDDFGTG S++ D++K+D F D+ +V+ I Sbjct: 802 LSIIQELESLGVGFAIDDFGTGFSSISYLRRFPFDTLKIDRSFIKDLGDNEGDADLVKSI 861 Query: 727 FDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKS 776 +A + V+ EGVE+ L GC AQG+LY +P+P + + Sbjct: 862 IAMANSMSLKVVGEGVETHGQREFLRLSGCHIAQGWLYSRPIPGKDFQEL 911 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 716 bits (1850), Expect = 0.0, Method: Composition-based stats. Identities = 129/741 (17%), Positives = 267/741 (36%), Gaps = 62/741 (8%) Query: 94 FLDSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLVDESGRVI--FADFNPSKRPWSV 151 L ++GL L + + + + ++ + S R A+ + + Sbjct: 43 LLTALGLGLQQQLHLSENTTSLARFLLVILFCAGVIKIYHSRRSTQRNANHDSRPEQFYA 102 Query: 152 ASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHV------DLNWRYLNE 205 Y+ R +F I +H+L ++ + V D L Sbjct: 103 FFQHGGAGMYS-YDTAGRILNANPAFCSMIGYSEHELKSMTILDVTPPQVRDETLNRLAR 161 Query: 206 YLDQIS-----------ANDEVLFLKQGHEIIAKNQLA------REKLIIYNSEGNYNII 248 + D+++ + L + I + + + + + + + Sbjct: 162 FRDKLNEPCNFEKTYLCKDGSTLIGHFTGKWIVSDNDSIYAVALVQDITEHKNADQAVLK 221 Query: 249 DSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVY------ 302 + + + A P A+ Y S L + L Sbjct: 222 EREFLQTVIDGIADPIMAISTDYHVILANRAARESHPEHALQPGPTLCYQLSHGSDTPCS 281 Query: 303 -------LMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAE 355 L ++ E+ E + + L + + II + + Sbjct: 282 DTNQKCPLCQVLKTGKEAREIHEHLRAGHEKRTYEIKASPLYNEDHSIRGIIETSRDLTD 341 Query: 356 MKDAEIERSNKLLSLIS---YDQESGFIKNMAIIESNNNQYL---------AVGIIKLCG 403 + ++E E + K L +DQ + + A+ I L Sbjct: 342 ILNSEAELNEKTQHLQFVTTHDQLTHLPNKELFFDRLERATFKTHRSPFFTALLFIDLDR 401 Query: 404 LEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQ---TFTRKI 460 + + G + +++++++ +R++ + + D +L++ + + T Sbjct: 402 FKHINDSLGHEIGDQLLQEVAKRLSTSIRKTDTLARMGGDEFLIIIEDIKELSHVSTVAK 461 Query: 461 AMVNDFDSSFGYRNLRIHK----SAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFC 516 ++ SF + P ++ ++A+ + ++ F Sbjct: 462 NFIDTILPSFTIDGHELFITPSMGISIAPTDTQHPKELLAFAEIAMYQAKGLGGNKCQFY 521 Query: 517 DDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIIS 576 + + I + +R A+ + L YQP DI + ++G EAL RW + G+IS Sbjct: 522 TAEMNSRAKTRIELESYLRKAVNQDQFVLYYQPQFDIQSGELVGCEALLRWQHPQMGMIS 581 Query: 577 PLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHE 636 P FI +AE+ G I E+G +++ A + + + + +N+SP Q EP F E Sbjct: 582 PNDFIPLAEETGVIIEIGEWVLQEACLQNKKWQDAG--HSPIRVAVNISPRQFREPGFLE 639 Query: 637 RFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKR 696 +++ G+K L +EITE+++ + ++QL+ +G+ ++IDDFGTG S+L Sbjct: 640 MIERVVQTTGIKPEWLELEITESLLMDDIDSAINILKQLKAKGIHLAIDDFGTGYSSLSY 699 Query: 697 FYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKL 754 +K+D F DI I + + LA + V+AEG+E+++ L + Sbjct: 700 LKRFPLSRLKIDRSFVRDITTDDNDASITKAVIALAHSMNLKVVAEGIETQEQLLFLKEK 759 Query: 755 GCVQAQGYLYQKPMPFSAWDK 775 GC QGYLY P+ +D Sbjct: 760 GCEVGQGYLYSPPVAKEPFDH 780 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 716 bits (1849), Expect = 0.0, Method: Composition-based stats. Identities = 119/594 (20%), Positives = 231/594 (38%), Gaps = 33/594 (5%) Query: 208 DQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNAL 267 D+ + L + E+ +N +++ + N Sbjct: 192 DEKGKRTDELVIANK-ELFFQNAEKEKRVGELRVAATVFETQEGMFVTDANLCILRVNKA 250 Query: 268 FEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLP 327 F Y G ++ S KLF + E++ + Sbjct: 251 FTNISGYSGEEVIGQSPKLFN--SGRQDKAFYKEMWNSINTTDAWRGEVSNRSKSGDIYA 308 Query: 328 DSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE 387 I A++ +G ++ I K A S K+ +L +D + +++ Sbjct: 309 -KNLTITAVRDGKGVVSNYVATFRDITTSKAA----SEKINNLAYFDPLTQLPNRRMLLD 363 Query: 388 ---------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIV 438 + +NQ+ A+ + L + + G D + +++++ R+ + + + Sbjct: 364 SLRHVLTISARSNQHCALLFLDLDNFKTLNDTLGHDVGDLLLQQVATRLTDCVREGDIVA 423 Query: 439 TFNADLYLLLCRENVQTFTRKIA--------MVNDFDSSFGYRNLRI----HKSAICEPL 486 D +++L ++ + + R Sbjct: 424 RLGGDEFVVLLENLSLQAIEAANKAKKVAKKIIFELAQYYQLNMHRYHSTTSIGVTIFSG 483 Query: 487 QGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLV 546 ++ +A+ + + + F + I + R++R A+E + L Sbjct: 484 NETGIEELLKQADIAMYQSKAAGRNTWHFFNKTMQESIIARADMERDLRKAIEDNQFQLH 543 Query: 547 YQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFR 606 YQ V ++ LGAEAL RW ERG +SP FI +AE+ G I +G ++ +A + + Sbjct: 544 YQAQVS-SSGQTLGAEALIRWQHPERGQVSPFNFIPLAEETGLILPIGQWVLDSACAQLK 602 Query: 607 HFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINE 666 + + L D +L +N+S QL++ F E+ +K + + L +E+TE+++ Sbjct: 603 AWQKN-PLTQDLVLAVNISAKQLHQEDFVEQVKATLKRHDINPARLKLELTESMLVENIS 661 Query: 667 HFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVR 724 + L K G+ S+DDFGTG S+L+ ++ + IK+D F D+ IVR Sbjct: 662 DIITKMNILSKIGISFSLDDFGTGYSSLQYLKKLPLNQIKIDQSFVRDLITDASDRAIVR 721 Query: 725 IIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 I ++ I VIAEGVE+ + + L+ GC QGYL+ KP+P + ++ K Sbjct: 722 TIITMSHSLDISVIAEGVETVEERQYLLDNGCTHYQGYLFSKPVPINEFEVLLK 775 >UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZE4_9PROT Length = 727 Score = 715 bits (1847), Expect = 0.0, Method: Composition-based stats. Identities = 125/614 (20%), Positives = 238/614 (38%), Gaps = 38/614 (6%) Query: 188 LLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNI 247 LLAV+ L + + + ++ + + L + +++ + + + L+ E +Y+ Sbjct: 127 LLAVEIPKTSLPLTTMLQPV--LAHLAKAIVLCRNNDVHTRGLIDQRDLLETVFESSYSG 184 Query: 248 IDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTR 307 + D K + V N F Y + + L L Sbjct: 185 VMITD----AKGNIVEVNPAFTRITGYQSEEVQGRNPHL--LASGRHDHTFYREMWDDIL 238 Query: 308 VFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKL 367 E+ + P I ++ G+ + I + + + K+AE ++ Sbjct: 239 ANGHWEGEIWDRRKNGEVYPSW-MNINPVRDISGNLLYYVGIFSDVTKRKEAEA----QI 293 Query: 368 LSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNK 418 L YD + + E + + AV + L + + G D ++ Sbjct: 294 HQLAFYDPLTELPNRRLLNERLQQAFSVGARSGHHGAVLFLDLDNFKTLNDTKGHDIGDQ 353 Query: 419 IVRKLCQRIAEKYAQCCDIVTFNADLYLLLC------RENVQTFTR--KIAMVNDFDSSF 470 ++ ++ +R+ + D ++++ + T + + Sbjct: 354 LLIEVAKRLNSCVRNGDTVARLGGDEFVVVLESLSSVPDEAATQADLVAEKIRYALSQPY 413 Query: 471 GYRNL----RIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEE 526 N + ++ + A+ + + F D IE Sbjct: 414 QLANHVHRTTPSIGVVMFRGHQQSLEEVLKFADTAMYQAKTAGRNAIRFYDPVMQASIEA 473 Query: 527 NIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAED 586 + +R +E +L L YQ +D ++ LGAE L RW ERG++SP +FI +AE+ Sbjct: 474 RAELEEELRQVVERNQLRLYYQVQMD-SSNRPLGAEVLLRWQHPERGLVSPAQFIPMAEE 532 Query: 587 IGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENG 646 G I +G +++TA + + + L D L +NVS Q F + + ++G Sbjct: 533 TGHIVPIGLWVLQTACTQLKVWQSD-PLTCDLTLAVNVSAKQFRSMDFVSQVQRTLAQSG 591 Query: 647 LKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIK 706 K + L +E+TE+++ E + +L+ GV S+DDFGTG S+L+ + D IK Sbjct: 592 AKPSLLKLELTESLVLENVEDTIAKMRELKLLGVSFSMDDFGTGYSSLQYLKRLPLDQIK 651 Query: 707 VDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLY 764 +D F DI IV+ I ++ + VIAEGVE+E L GC QGYL+ Sbjct: 652 IDQSFVRDIASDSNDAAIVQTIIAMSEVLGLNVIAEGVETEAQREFLDLRGCHAFQGYLF 711 Query: 765 QKPMPFSAWDKSGK 778 +P P + ++ + Sbjct: 712 GRPAPLAEFEAILR 725 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 715 bits (1846), Expect = 0.0, Method: Composition-based stats. Identities = 145/778 (18%), Positives = 281/778 (36%), Gaps = 38/778 (4%) Query: 25 GLFFIINYQLVSERAVKRADSRFELI---QKNVGYFFKDIERSALTLKDSLYLLKNTEEI 81 I+++ ++E K +L+ + + F +L ++D+ + + + Sbjct: 174 IFGAAISWKNIAESQEKNRHQLKQLLARERSYLQLFDAIGRIQSLFIQDANPSVLFGKVL 233 Query: 82 QRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNG-PLVDESGRVIFA 140 Q A+ L L + N Y + + P + Sbjct: 234 QEALTLSKSEFGLLGEIRYSKTGNSYLRTLAAGHVACSEHGCYLRATCPTSGAEILQLKT 293 Query: 141 DFN-PSKRPWSVASDDSN-NSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDL 198 FN + + ++D +SW D K+ ++ + + ++ + Sbjct: 294 LFNRAMSQGKVIIANDIRHDSWAAGMLSHDSQIKRFLALPFYHHNSLLGIIGIANRDKPY 353 Query: 199 NWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEK 258 + +N +S +L + KN +R +L E + DT K Sbjct: 354 DKSLINYLNPLLSTCGSILDAYHNDQR-RKNAESRLRLTAKVFESTVEGVIITDT----K 408 Query: 259 TSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTE 318 V N F ++ I V + + + E+ Sbjct: 409 AYVVDVNEAFTHITGIARSEIMGRHLSTLQTKQEKPISFQRVRH--AIKSTGQWQGELWS 466 Query: 319 LVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESG 378 P A++ + + ++I + I K E +L L +D +G Sbjct: 467 QRKNGEIYPLWVTA-NAVRNSKEEITHFVAIFSDITLRKQTE----QRLYYLAHHDALTG 521 Query: 379 FIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAE 429 ++ ++ +AV I L + + G + +++++ +R+ Sbjct: 522 LPNRSLFLDRLEHAIHHAQRHHHRIAVLFIDLDRFKFINDTLGHPIGDILLKQVAERMRL 581 Query: 430 KYAQCCDIVTFNADLYLLLCRENVQTFTR---KIAMVNDFDSSFGYRNLRI----HKSAI 482 I D + ++ T +++ + F + + Sbjct: 582 NIRAEDTIARLGGDEFTVIIENFTDTSAISLITQKIISACEKPFNIKGNELFVSASIGVS 641 Query: 483 CEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGE 542 P G A ++ A+ + S F E + + +R A+ E Sbjct: 642 LYPEDGHEASMLLQRADAAMYQAKKRGKSCCQFFTTEINTAATEQLALKNLLRRALARKE 701 Query: 543 LFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAM 602 L YQPI+++ + AI+ EAL RWV E G+ISP FI +AE+ G I LG +++TA Sbjct: 702 FQLYYQPIINMESGAIVSVEALIRWVDPELGLISPNTFIPLAEENGLILPLGEWVLQTAC 761 Query: 603 GEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIE 662 + + ++Q + IN+S QL + F ER + I+K+ + L +E+TE+++ Sbjct: 762 TQAKIWNQSNPY--PVRIAINLSARQLEQTDFSERVSEILKKTPFPTDHLELELTESMLI 819 Query: 663 RINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD--IFGTAG 720 E + L+K G R+S+DDFGTG S L D++K+D F I Sbjct: 820 NRMESSLKTLNTLKKMGCRLSLDDFGTGYSPLAYLKRFPIDTVKIDRSFVQGISIDPDDA 879 Query: 721 KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 I + +A + VIA+GVE+ + L ++ +AQGY P+P + + Sbjct: 880 AITTAVTTMAHSLKRAVIAKGVETREQLNFLNEIKVDEAQGYFISYPVPAEELTQKLR 937 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 715 bits (1846), Expect = 0.0, Method: Composition-based stats. Identities = 119/618 (19%), Positives = 250/618 (40%), Gaps = 48/618 (7%) Query: 184 KDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEG 243 KD ++ V+ L + E ++ +I A A+E ++I +++ Sbjct: 536 KDGTVIDVEISGYPLQLHGKPALFNSSRDITERKKIEVEIQIAATAFEAQEGMLITDADR 595 Query: 244 NYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYL 303 N + N F Y ++ + ++ L Sbjct: 596 NILRV----------------NRAFTDITGYSAEEVIGKNPRI--LSSGLHDSHFYAAMW 637 Query: 304 MTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIER 363 T E+ P+ I A+K G ++ + I K AE Sbjct: 638 NTLVATGAWKGEIWNKRKNGEVYPERL-AITAVKDARGVVINYVASLSDITLHKAAE--- 693 Query: 364 SNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVD 414 +++ SL +D +G +++ + + A+ + L + + G D Sbjct: 694 -DEIRSLAFFDPLTGLPNRRLLMDRLQQALVASSRSGKAGALLFLDLDNFKNLNDTLGHD 752 Query: 415 ERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKI--------AMVNDF 466 + +++++ QR+ + + D ++++ + +++ Sbjct: 753 IGDLLLQQVAQRLKNCVREGDTVARIGGDEFVVMLEDLSAESIEAASQTEAVGWKIISTL 812 Query: 467 DSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLN 522 + + + A + + ++ +A+ + + F D + Sbjct: 813 NKPYHLEKFEVHSTPSIGATLFDSRPQIIDDLFKQADIAMYQAKKAGRNTMRFFDPQMQD 872 Query: 523 EIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFIT 582 + + ++R ++E E L YQ VD +GAEAL RW+ +RG++SP +FI Sbjct: 873 TLNTRTALEADLRKSIERREFNLFYQIQVD-EMNRPVGAEALIRWIHPKRGMVSPAEFIP 931 Query: 583 IAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIM 642 +AE+ I +G +++ A + + + L + +L +NVS Q + F + + Sbjct: 932 LAEETDLILNIGLWVLQEACAQLKTWQNN-PLTRNLVLAVNVSAKQFRQSDFATQVRVFV 990 Query: 643 KENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINP 702 ++ + + L +E+TE++++ E L + L++ GV+ S+DDFGTG S+L+ ++ Sbjct: 991 EKYAIDPSKLKLELTESMLQENIEDTILIMNALKEIGVQFSLDDFGTGYSSLQYIKKLPL 1050 Query: 703 DSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQ 760 + +K+D F D+ IVR I +A+ ++ VIAEGVE+++ + L+ GC Q Sbjct: 1051 NQLKIDQSFVHDLDFDRDDKAIVRAIIAMAKSLQLDVIAEGVETQEQRQLLLNKGCTHFQ 1110 Query: 761 GYLYQKPMPFSAWDKSGK 778 GYL+ KP+P +D + Sbjct: 1111 GYLFSKPLPIREFDALLE 1128 Score = 61.2 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 40/145 (27%), Gaps = 9/145 (6%) Query: 220 KQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNL 279 + + +L R +++S II ++ I N F Y ++ Sbjct: 317 QNEAQRREAERLQRINATVFDSSAEAIIITDLNANIIS------VNPAFTQITGYSPEDV 370 Query: 280 LNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIR 339 L + ++ L E+ + + I A + Sbjct: 371 LGKNPRI--LSSGQQSKGFYRELWEALLRDNFWQGELVNRHKNGSLY-NIHLSISASRDG 427 Query: 340 EGDAKEIISIKNSIAEMKDAEIERS 364 G + I + I E K E E Sbjct: 428 TGQLQHFIGVTTDITERKQHESELR 452 >UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodoferax ferrireducens T118 RepID=Q21R50_RHOFD Length = 1052 Score = 714 bits (1845), Expect = 0.0, Method: Composition-based stats. Identities = 123/608 (20%), Positives = 230/608 (37%), Gaps = 43/608 (7%) Query: 200 WRYLN--EYLDQISANDEVLFLKQGH-EIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYI 256 W +L ++D ++ + + R I + SE I D Sbjct: 461 WGHLTGQRFVDGNGEEQGLVGVIADITQRRQTEAELRIAAIAFESEQGMAITDPQGV--- 517 Query: 257 EKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEM 316 + N F Y + + +L L + E+ Sbjct: 518 ----MLRVNRAFSAITGYSAPEAVGQNPRL--LSSGRHDAAFYAAMWDSLVREGAWQGEI 571 Query: 317 TELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQE 376 P+ I A+K G A ++ ++ K AE +++ SL YD Sbjct: 572 WNRRKNGEVFPEWL-TISAVKDPAGQATHYVATFTDLSTRKSAE----DQIKSLAFYDTL 626 Query: 377 SGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRI 427 +G +++ + + A+ I L + + +G D +++++++ QR+ Sbjct: 627 TGLPNRRLLLDRLKQALASGARHRRQGALLYIDLDDFKTLNNTYGHDVGDQLLQEVAQRL 686 Query: 428 AEKYAQCCDIVTFNADLYLLLCR----ENVQTFTRKI----AMVNDFDSSFGYRNL---- 475 + + D +++L +V+ T + + + Sbjct: 687 SHYLRAGDTVARPGGDSFVVLLEALSTNSVEAATEAENTGEKIRLALSQPYQIADHAHRS 746 Query: 476 RIHKSAICEPL-QGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNI 534 Q E ++ +LA+ + + F D + + ++ Sbjct: 747 TASIGVTLFDDRQQEGIDEPLKRAELAMYQAKTAGRNTLRFFDPQMQTAVMAMAALEADL 806 Query: 535 RHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELG 594 R A+ + L YQ V R + G EAL RW RG++ P +FI +AE G I LG Sbjct: 807 REAVRSNQFLLYYQAQVSGE-RQVAGVEALVRWQHPVRGLVPPAEFIPLAEQTGLILPLG 865 Query: 595 YQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCV 654 +++TA + ++ + + + +NVS Q ++ F + +K G L + Sbjct: 866 QWVLETACAQLAAWASQ-PERAHLTVAVNVSALQFHQADFVAQVLAALKRAGANPQRLKL 924 Query: 655 EITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD 714 E+TE+++ E + L++QGV S+DDFGTG S+L + + +K+D F D Sbjct: 925 ELTESLLVHDAEDVIAKMITLKEQGVGFSLDDFGTGYSSLSYLKRLPLNQLKIDQGFVRD 984 Query: 715 IFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 I I +++ LA + VIAEGVE+E L GC QG+LY + +P A Sbjct: 985 ILHDANDAAIAKMVVALADTLGLSVIAEGVETEAQRDFLAAQGCHAYQGHLYSRALPIDA 1044 Query: 773 WDKSGKLV 780 ++ + V Sbjct: 1045 FEAFMRQV 1052 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 714 bits (1844), Expect = 0.0, Method: Composition-based stats. Identities = 118/543 (21%), Positives = 222/543 (40%), Gaps = 27/543 (4%) Query: 258 KTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMT 317 K + N +E + +L + K+ E+ Sbjct: 403 KNQIMDVNPAYERITGFMRHEVLGRNPKI--TQSGRHDASFYATMWKHLVGEGHWSGEIW 460 Query: 318 ELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQES 377 + P I A++ R+G + + N I+ K E +L L+ YD + Sbjct: 461 DRRRNGEIFPKWL-AISAIRNRQGVISHFVGVFNDISRQKSTE----QQLERLVFYDPLT 515 Query: 378 GFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIA 428 + + +N+ +++ ++ L + + G ++++ ++ +R+ Sbjct: 516 QLPNRVLFRDRLIHEVGVAERSNKLMSLLLVDLDRFKIINDTLGHGVGDELLLQVSKRLI 575 Query: 429 EKYAQCCDIVTFNADLYLLLCR--ENVQTFT-RKIAMVNDFDSSFGYRNLRIHKSAICEP 485 + + D + ++ E + ++N F + A Sbjct: 576 ASVRKSDTVARLGGDEFAIILPGMERAEDAAHVAETIINQLQVPFSIEENELFVGASIGI 635 Query: 486 ----LQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIG 541 G++ S A+ ++ + F + + + + +R A++ Sbjct: 636 AVHGQDGDDYDSLTMNADAAMFKAKESGKGTYKFFTPDMNIQNAKRLVMEAELRRAVDNQ 695 Query: 542 ELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTA 601 EL L YQP VD +R I+G EAL RWV RG+I P +FI +AE+ G I LG ++ A Sbjct: 696 ELMLHYQPKVDAESRQIVGMEALVRWVHPTRGVIPPGEFIPLAEETGLIVPLGELVLTRA 755 Query: 602 MGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVI 661 + + + + +N+SP Q EP+ E+ + I+++ G A L +EITE++ Sbjct: 756 CAQVKQWWDMGL--PQVQVAVNLSPRQFQEPNLIEKVSEILRKTGFPATGLELEITESIA 813 Query: 662 ERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA-- 719 ++ +++L+ GVRISIDDFGTG S+L + ++K+D F D+ G Sbjct: 814 MHDVDNTIETVKKLKDLGVRISIDDFGTGYSSLSYLKKFPLHALKIDQSFVRDLGGDDDG 873 Query: 720 GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKL 779 I+ I +A+ + V+AEGVE+ L C Q QG+ KP+P S + + Sbjct: 874 ASIISSIISMAKAMALGVVAEGVETAQQMEFLRGQECQQVQGFFLSKPLPPSDFLALLER 933 Query: 780 VKE 782 +E Sbjct: 934 QQE 936 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 713 bits (1842), Expect = 0.0, Method: Composition-based stats. Identities = 116/558 (20%), Positives = 220/558 (39%), Gaps = 33/558 (5%) Query: 233 REKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFA 292 + +++S I + D + N F Y ++ + ++ L Sbjct: 777 LQAATVFDSSAEGITITAPDGNI------IAVNRAFTEITGYTEDEVIGRNPRM--LQSG 828 Query: 293 FIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNS 352 F + R E+ +S I A+K +G + + + Sbjct: 829 FQDRRFYLDMWQALGTQGRWRGELWNRRKDGQTFLESL-TISAVKDAQGKVAHYVGVFSD 887 Query: 353 IAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCG 403 I E++ A ++L +D +G + + + + LAV I L Sbjct: 888 ITELRRA----HDQLDHQAHHDPLTGLPNRLLLGDRLHKALQRAHRDETGLAVFFIDLDR 943 Query: 404 LEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFT---RKI 460 + + G ++++ ++ R+ + + D +L++ + + Sbjct: 944 FKNINDTLGHQVGDRVLCEVAWRLGRLMRESDTVGRLGGDEFLIVIEDVGEPTAVSHIAE 1003 Query: 461 AMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFC 516 ++N +S P G +A + + +A+ ++ + + F Sbjct: 1004 KILNVLQASPVTVEHEFFVGASIGISVFPQDGADAETLMKNADVAMYRAKERGRNTYEFF 1063 Query: 517 DDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIIS 576 + + ++R A+E GEL + QP + T ++GAEAL RW+ ++G++ Sbjct: 1064 TKDLTQTSLARLQMETDLRRAIERGELRVYLQPQFSLATGKVVGAEALVRWLRPQQGLVL 1123 Query: 577 PLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHE 636 P +FI +AE+ G I +G + TA ++ + +L +NVS + + Sbjct: 1124 PGEFIKLAEESGLIVPIGEWVQGTAACQWATWVAAGL--APGVLSVNVSGVEFARGRIQQ 1181 Query: 637 RFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKR 696 ++ +GL A L +EITE+ I E+ ++ LR G+ + IDDFGTG S+L Sbjct: 1182 TARRTLELSGLPARFLELEITESAIMSHAENSVQVLDNLRAMGISLVIDDFGTGYSSLAY 1241 Query: 697 FYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKL 754 + + +KVD F + I R + L ++ VIAEGVE+E L Sbjct: 1242 LKRLPLNKLKVDQSFVRGLPNDTEDCAIARAVIALGHSLQLTVIAEGVETEAQREFLTGE 1301 Query: 755 GCVQAQGYLYQKPMPFSA 772 GC + QGYL +PMPF Sbjct: 1302 GCDEMQGYLRGRPMPFDD 1319 Score = 42.4 bits (99), Expect = 0.076, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 45/172 (26%), Gaps = 6/172 (3%) Query: 200 WRYLNEYLDQISANDE-VLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEK 258 W + L + +++L + + A E L+ + ++ Sbjct: 348 WCRVTGSLANPGEPGDGLVWLFEDVTEKRQADRAMEALLREQAL--IFERAPTGIAFLRD 405 Query: 259 TSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTE 318 N FE F Y G LL S ++ + A + E+ Sbjct: 406 RVIQRCNPSFERIFGYAPGQLLGQSTRVCFASEAAW-REAGERAYAVADESGKFIGELEY 464 Query: 319 LVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSL 370 P +L A+ + + + + AE L Sbjct: 465 CRADGT--PIWCQVTGSLLNPANPAEGYVWLFEDVTARRAAEEALVESLWEQ 514 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 713 bits (1842), Expect = 0.0, Method: Composition-based stats. Identities = 127/605 (20%), Positives = 238/605 (39%), Gaps = 36/605 (5%) Query: 199 NWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLARE---KLIIYNSEGNYNIIDSVDTEY 255 + RYL ++Q++ + +I + Q R+ ++ S +I D Sbjct: 38 SERYLEVTVNQLNYQGDAYLCATARDISGRRQTERQLRLAAQVFESSNEAILISDPDNRI 97 Query: 256 IEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSE 315 + N F Y + + K L T + + E Sbjct: 98 ------LTVNRAFGHITGYGEAEVRGS--KASMLFSDRHEPAFFQQMWQTLQQRGQWSGE 149 Query: 316 MTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQ 375 + + P I L+ +G+ +++ I+E K+ E ++ + YD Sbjct: 150 IWNRRKSGEHFPCWV-NISVLQDGQGEISHFVALFTDISERKEQEA----RVQHMAEYDA 204 Query: 376 ESGFIKNMAIIESNN---------NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQR 426 + + + + + + LAV + L + + G +++++++ +R Sbjct: 205 LTDLPNRVLVNDRLHQAIRQAELQHNQLAVLFVDLDHFKNINDTLGHCAGDELLKEVARR 264 Query: 427 IAEKYAQCCDIVTFNADLYLLLCR---ENVQTFTRKIAMVNDFDSSFGYRNLRI----HK 479 +A + D ++L+ + + ++ F + Sbjct: 265 LAGAVRGLDTVGRTGGDEFVLILPSINQPGEAAQIAERILRTIQQPFQIGEHSLVVGCSI 324 Query: 480 SAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAME 539 P G + + LA+ + H + F F ++ E + + +R AME Sbjct: 325 GISLMPDDGSDIQTLLMNADLAMYHAKAHGRNTFRFYTREMNTQVAERLLMENRLRRAME 384 Query: 540 IGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIK 599 +L+LVYQP D+ + +LG EAL RW + G+I P +FI +AED G I LG ++ Sbjct: 385 QEQLYLVYQPQYDMAGQRLLGCEALLRWRDPDEGLIMPGRFIPVAEDTGLIVPLGRWVLD 444 Query: 600 TAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITET 659 A + + + + + +NVS QL F + ++ + L + L +E+TE+ Sbjct: 445 QACRQASLWLRAGL--EPMRVAVNVSAHQLMRHDFIDDVREALQRHALPGHCLELEVTES 502 Query: 660 VIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT- 718 + + + ++ GVR++IDDFGTG S+L PD +K+D F D+ G Sbjct: 503 TLMADADLASRQLAVIKAMGVRLAIDDFGTGYSSLAYLKRFAPDLVKIDRSFISDLPGDE 562 Query: 719 -AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 IV I LA + +AEGVE+E+ R L LGC QGYL P+ + Sbjct: 563 ENAAIVSAIVHLAGALGMETLAEGVENENQQRFLQTLGCEAMQGYLLGSPLAEEMMTRRL 622 Query: 778 KLVKE 782 + + Sbjct: 623 EQQQR 627 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 123/536 (22%), Positives = 222/536 (41%), Gaps = 27/536 (5%) Query: 261 AVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELV 320 + N F I Y ++ S + A + + L + Sbjct: 361 VIYANRAFSIMTGYSHDEIIGLSPRFL---LANDLAQPGLERLRNCMRHGGSARAILRNY 417 Query: 321 NTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI 380 L + + A+ G+ IS+ N + + K E L ++D +G Sbjct: 418 RKDGSLFWNEVALAAVHNEHGEIAHFISVFNDVTDRKRYEAA----LEYQANHDDLTGLP 473 Query: 381 KNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKY 431 + + + LAV ++ L + V G + +++++ R+++ Sbjct: 474 NRNLLRDRLEHAITKATREHTKLAVLLLDLDQFKRVNDGLGHKIGDTLIQRVASRMSQCV 533 Query: 432 AQCCDIVTFNADLYLLL---CRENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICE 484 + D +++L R+ T ++ F I Sbjct: 534 RDSDTVARLGGDEFMILSTDIRDERAAATLAQKLLRQFRQKVAINGHEIIASASIGIAMF 593 Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELF 544 P G+N A+ +D + F F N + E +++ +++R+A+ + +L Sbjct: 594 PKDGDNGDELFRNADTAMYRAKDVGRNGFQFYSAEMNNRMRERLYLEQSLRNAIGLHQLS 653 Query: 545 LVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGE 604 L YQP +D+ + ++ AEAL RW + G+ISP FI IAE+ G I +G +I+ A + Sbjct: 654 LWYQPKLDLASGSVKSAEALIRWRHPQLGMISPGDFIPIAEETGLILPIGAWVIEEASRQ 713 Query: 605 FRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERI 664 + + D + IN+S +QL+ ++ + GL SL +E+TET I Sbjct: 714 LAKWRDQ--ENQDIRVAINISAYQLSHGKLTDQVIQALDSLGLDPQSLTIEVTETAIMPQ 771 Query: 665 NEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKI 722 + ++ LR+ G+R+++DDFGTG S+L D +K+D F DI +G I Sbjct: 772 MDKAVCELQSLREMGIRVALDDFGTGYSSLTYLKRFPIDILKIDRSFVSDIADDEESGAI 831 Query: 723 VRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 V+ I +LA + V+AEGVE+E L GC + QGY + KP+P + + Sbjct: 832 VKTIINLAHNLNMTVVAEGVETEAQLEFLRTNGCDEVQGYYFCKPLPSEECLEFLR 887 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 712 bits (1840), Expect = 0.0, Method: Composition-based stats. Identities = 103/464 (22%), Positives = 189/464 (40%), Gaps = 29/464 (6%) Query: 339 REGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKN---------MAIIESN 389 ++G + I + ++AE + L YD +G + Sbjct: 635 QDGVLERIRGTVQDVTSAREAEAH----IQYLAHYDSLTGLPNRSAWMNQARSALSLAQR 690 Query: 390 NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC 449 + LAV + L + V G ++++ + QR+A + D ++ L Sbjct: 691 HQHILAVLFLDLDNFKTVNDSLGHPVGDRLLAAVAQRLAHCLREEDSFARLGGDEFVALL 750 Query: 450 R-----ENVQTFTRKIAMVNDFDSSFGYRNLR----IHKSAICEPLQGENAWSYAEKLKL 500 E+ RK M++ + + + P G + + + Sbjct: 751 PRVTRAEDAAAVARK--MLDALATPVVIDDHELAPSVSIGISLFPSDGTDVDTLLKHADT 808 Query: 501 AISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILG 560 A+ ++ + F F E + + +R A+E EL L YQP V + G Sbjct: 809 AMYGAKEVGRNNFQFFVPEMNTRALERLLLENALRRAIERNELTLHYQPQVAATSDRPNG 868 Query: 561 AEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLL 620 EAL RW + G++ P +FI IAED G I LG +++ A + +++ ++ Sbjct: 869 CEALVRWQHPDFGLVPPAQFIPIAEDSGLIVPLGEWVLREACRQQVKWARSGL---HLMV 925 Query: 621 HINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGV 680 +N+S Q F + ++ E G + +EITE+ + ++ + +L G+ Sbjct: 926 GVNISALQFRRADFVDSVVQVLAETGANPERIELEITESALMDASDALSRRLRELANMGL 985 Query: 681 RISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVI 738 +++DDFGTG S+L + +K+D F D+ G + LAR + V+ Sbjct: 986 SLALDDFGTGYSSLAYLKRLPIGRLKIDRSFVKDLPGDPEDAAVTAATLSLARDLGLEVV 1045 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE 782 AEGVE+ L+ GC QGYLY +P+ +A++ + +E Sbjct: 1046 AEGVETVAQRDFLVARGCHTLQGYLYSRPLDVAAFEAWMQATEE 1089 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 712 bits (1839), Expect = 0.0, Method: Composition-based stats. Identities = 120/715 (16%), Positives = 257/715 (35%), Gaps = 66/715 (9%) Query: 103 DDNKYYLFSRRANDKIVVYHQEQVNGP---LVDESGRVIFADFNPSKRPWSVASD----- 154 + +Y F +++ Q N + E+ + ++N S W+ + Sbjct: 538 QNWEYENFLEDITEQLETQQTLQKNKKNIQQLAENTEAVLYEYNLSDNKWTYMAPQVERI 597 Query: 155 -DSNNS----------------WNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVD 197 W A + + ++ D V Sbjct: 598 FGYKPEDWIDNQFWLDRVHEADWGKASREELSKLNQQEAHSIEYRFYKKDGSIVWVR--- 654 Query: 198 LNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIE 257 + + + +L + + I + EY+ Sbjct: 655 -DIIRIESDAENKLCLHGLLIDITDSKQSESQLKKLSRAIEQSPVSVVITDPEGRIEYV- 712 Query: 258 KTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMT 317 N F Y ++ + ++ L ++ + T + + E+ Sbjct: 713 -------NPKFTQLTGYTLEEVIAQNPRI--LKSGNLLPSVYDSLWKTITSGKEWYGELE 763 Query: 318 ELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQES 377 + +S I L G I +K I + K E +L + ++D + Sbjct: 764 NKRKDGSIFWES-ASISPLFDESGKIINFIGVKEDITQRKLNEK----RLEYMATHDGLT 818 Query: 378 GFIKNMAIIE---------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIA 428 G + + + + +AV ++ L + + G +++++ + QR+ Sbjct: 819 GLANRTLLYDHLEIALHQSQRSKKLVAVILLDLDRFKVINDSLGHLVGDQVLKAVGQRLK 878 Query: 429 EKYAQCCDIVTFNADLYLLLCRENVQTFTR---KIAMVNDFDSSFGYRNLRIHKSAICEP 485 + + D +++L + T ++ + F ++ SA Sbjct: 879 QYVRSTDTVARLGGDEFVVLLTDVRDTTAAGKIAHNLLRKLNEPFFLHGRELYVSASFGI 938 Query: 486 ----LQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIG 541 + +A+ + + F + + + + ++R A+E Sbjct: 939 CLSETDNVDGTILLRNADIAMYKAKAEGCGLY-FYSHEMNEHLIKTLEMENSLRQALEKN 997 Query: 542 ELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTA 601 E L YQP V+ T I+G EAL RW +RG+I P +FI +AE+ G I ++G+ ++ A Sbjct: 998 EFQLYYQPKVEHATGRIIGCEALLRWRHPQRGMIPPSEFIPLAEETGLIVQIGHWVLAEA 1057 Query: 602 MGEFRHFSQRASLKDDFLLHINVSPWQLNEP-HFHERFTTIMKENGLKANSLCVEITETV 660 + + + + +N+S Q + + + + ++ + L + L +E+TE++ Sbjct: 1058 CRQSKIWETEGL--PPLTMAVNISARQFYQGENLIQAVKSTLERSQLVPSQLELELTESM 1115 Query: 661 IERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT-- 718 + + + + ++++ GV +S+DDFGTG S+L DS+K+D F DI Sbjct: 1116 VMKDAVNAERTMRKIKQLGVSLSLDDFGTGYSSLNYLRSFPVDSLKIDRSFILDIASDAS 1175 Query: 719 AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 + I+ I +A + +AEGVE+ D + GC QGYL+ +P+P + Sbjct: 1176 SAAILNSIIAIAHTLGLQTVAEGVENNDQLALVANCGCNYIQGYLFSRPLPPEDF 1230 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 711 bits (1837), Expect = 0.0, Method: Composition-based stats. Identities = 119/532 (22%), Positives = 202/532 (37%), Gaps = 27/532 (5%) Query: 265 NALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLA 324 N F Y LL L + V+ + L V E+T L + Sbjct: 58 NPFLVGMFGYSAEELLEQMGPLDLILPEQHAFVIEQMQLRAAGVLG-HNYELTGLRKDGS 116 Query: 325 FLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMA 384 LP ++ G + I+ K AE ++ L YD +G Sbjct: 117 TLPIMVLGSPSVI---GGLPASVGTVLDISAQKAAE----QRIRELADYDVLTGLPNRRL 169 Query: 385 IIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCC 435 + E +AV + L + V G ++++ ++ +R+ + Sbjct: 170 LRERFEQLLAAAEREKSEIAVIFLDLDHFKRVNDSLGHSVGDELLCEVARRLDSVVRRID 229 Query: 436 DIVTFNADLYLLLCR--ENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGE 489 + D ++ +V F F + P G Sbjct: 230 TLARLGGDEFIFAMPGFHTAAAVEVARRLVEVFSRPFEVAGHELTVTPSLGISIYPHDGR 289 Query: 490 NAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQP 549 + + A+ ++ + F F + + + N+R A+ E L YQP Sbjct: 290 DLETLLRNADTAMYRAKEMGRNAFQFYSSEMNTTTLDRLLMESNLRRALVQNEFILHYQP 349 Query: 550 IVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFS 609 +V++ T I+G EAL RW+ E G+I P +FI +AE+ G IN +G ++ A + + + Sbjct: 350 LVNLETGLIIGVEALIRWLHPELGLIMPDRFIHVAEETGLINPIGDWVLCEACRQAKAWC 409 Query: 610 QRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFY 669 + +NV+P Q + F E + +GL A+ L +E+TE + + Sbjct: 410 DAGL--PPICMAVNVAPVQFRQAGFVEMVAGALATSGLDASRLELELTERTVMHDADINM 467 Query: 670 LNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIF 727 + L + GV +S+DDFGTG S+L +K+D F D+ I I Sbjct: 468 GTLSALHRMGVELSLDDFGTGYSSLAYLKRFPVGKLKIDRSFVNDLETDPDDWAIASTIV 527 Query: 728 DLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKL 779 + R R+ V+AEGVE + L K+GC AQGY + +PM +L Sbjct: 528 SMGRSLRMTVLAEGVEKVEQLALLRKMGCDMAQGYYFSRPMSADGMADMLRL 579 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 710 bits (1834), Expect = 0.0, Method: Composition-based stats. Identities = 106/475 (22%), Positives = 212/475 (44%), Gaps = 24/475 (5%) Query: 317 TELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQE 376 T L+ D ++ ++G+ ++ + + ++E ++ +NK+ L +D Sbjct: 272 TALIGRHGNEYAIEDSAAPIRDQDGNVLGVVLVFHDVSEARNM----ANKMTYLAEHDYL 327 Query: 377 SGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRI 427 +G + + + + +++A+ + L + + G + +++++ + +R+ Sbjct: 328 TGLPNRLLLNDRLNQALTIARRDQEFIALMFLDLDHFKNINDSLGHEVGDQLLKMVARRL 387 Query: 428 AEKYAQCCDIVTFNADLYLLLCRENV---QTFTRKIAMVNDFDSSFGYRNLRI----HKS 480 I D +++L E ++ + + I Sbjct: 388 ESCLRASDTISRQGGDEFMILLPELTNYFSPAEVAEKLLAAATVPYEIGSHEITVSASIG 447 Query: 481 AICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEI 540 P GEN + A+ + + + F A + E + +R A+E Sbjct: 448 IAVFPDDGENGELLTKNADAAMYHAKSLGRNNYQFFTRAMNERVMEIAELESKLRRAVER 507 Query: 541 GELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKT 600 E L YQP +DI T ++GAEAL RW G+++P +FI IAED G I +G +++ Sbjct: 508 NEFVLYYQPKIDIRTGQVVGAEALIRWQHPSWGLVAPDRFIPIAEDSGLIRPIGLWVMRE 567 Query: 601 AMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETV 660 A + + + + + +N+S QL + +F + + I+ +GL+ + L +E+TE+V Sbjct: 568 ACRQNQEWQAAGLAR--IPVAVNLSTVQLRQHNFLQEVSEILLMSGLEPDYLELEVTESV 625 Query: 661 IERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG 720 + +LR GV++++DDFGTG S+L + +++K+D F DI Sbjct: 626 AIHAETEVINWLHKLRSMGVKLALDDFGTGYSSLSYLKRLPINNVKIDKSFIRDIETDPD 685 Query: 721 K--IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 I+ I ++ R+ VIAEGVE+ + L K GC Q QG++ +P+P + Sbjct: 686 DATIITAIIRMSHGLRLNVIAEGVENINQLEFLKKEGCDQMQGFIASRPVPADEF 740 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 709 bits (1831), Expect = 0.0, Method: Composition-based stats. Identities = 137/786 (17%), Positives = 262/786 (33%), Gaps = 54/786 (6%) Query: 37 ERAVKRADSRFELIQKNVGYFFKDIERSALT-LKDSLYLLKNTEEIQR-AVILKMEMMPF 94 A + ++ LI + + + A+ + + L ++R A I + Sbjct: 66 TLAGQIGETIDTLIGSPLTSYLTPADALAVQKVVEGAIALHGGVPVRRIAHIRHISGSER 125 Query: 95 LDSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLVDESGRVIFADFNPSKRPWSVASD 154 + S+ DN + + + + R IF + + + D Sbjct: 126 VYSLRFSPLDNGPHPLLVVITRDMTAQVAAENALRAAEGKYRAIFEN--AVEGIYQSTPD 183 Query: 155 DS----NNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNWR-YLNEYLDQ 209 + N + Y P + FT + D + + + ++ + Sbjct: 184 GTYLDVNPALARIYGYAS-PAELIAHFTDIASQLYVDGTKRGEFQRLMRETGEVRDFTAE 242 Query: 210 ISAN-DEVLFLKQGHEIIAKNQLA--------------REKLIIYNSEGNYNIIDSVDTE 254 + +++ + + R+ G + Sbjct: 243 VWRCDGHTIWITENARCVRGPDNEVLYYEGTVEDITAQRQSQETMRLLGKVFTSIAEGIV 302 Query: 255 YIEKTSAV-PNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQF 313 +E+ V N FE ++ +LF L Sbjct: 303 LLERDLTVRTVNPAFEAMTGLLRQDMEGRPARLFASGLHEND--FLATVAAEVDRAGLWR 360 Query: 314 SEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISY 373 E+ + A++ R G+ ++ I + K E + ++ Sbjct: 361 GEIWGERREGPPY-SGEMTVTAVRTRAGETTHYVAAITDITKRKRDE----EHIRFQANF 415 Query: 374 DQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLC 424 D + I++ + + V + L + + +G +++++ Sbjct: 416 DMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQINDSYGHSAGDEVLKLTA 475 Query: 425 QRIAEKYAQCCDIVTFNADLYLLLCRENVQTFT---RKIAMVNDFDSSFGYRNLRI---- 477 +R+ + D ++++ ++ F + Sbjct: 476 RRLRNCVRISDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILYSLSEPFPIGGTEVFCIP 535 Query: 478 HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHA 537 P GE A +A+ + + + + ++RHA Sbjct: 536 SVGITYFPDHGETAPDLLRNADVAMYHAKQGGERRYAIFTPDMARRSLALLTMESDLRHA 595 Query: 538 MEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQI 597 + E L +QP V ++GAEAL RW E+G+I+P FI +AE+ G I +G Sbjct: 596 LARDEFELHFQPKVR-ADLTLIGAEALIRWRHPEKGLINPGDFIPLAEESGLILPIGRWT 654 Query: 598 IKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEIT 657 ++ A + + +NVSP Q + E I+ E GL+ +L +EIT Sbjct: 655 LREACDRVMSWRAEGLTIP--SVSVNVSPRQFQDQTLVETVRQILVETGLEPEALDLEIT 712 Query: 658 ETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG 717 ETV+ EH + L+ GV +SIDDFGTG S+L D++K+D F D+ Sbjct: 713 ETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKIDQTFVRDVLH 772 Query: 718 T--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 + IV I LAR V+AEGVE + A L C QG+LY +P+P + + Sbjct: 773 SGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSRPLPPAEFTT 832 Query: 776 SGKLVK 781 + K Sbjct: 833 FLRTAK 838 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 709 bits (1831), Expect = 0.0, Method: Composition-based stats. Identities = 116/503 (23%), Positives = 208/503 (41%), Gaps = 29/503 (5%) Query: 299 LVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKD 358 ++ L R E L + G I+I I E K Sbjct: 313 ILPSLRKALEGERSNFEGHYLATYSDAEGWAYITCTPFHDHNGQIAGGIAIVQDITEHKA 372 Query: 359 AEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEA 409 AE K+ +L YD +G +++ + + A+ I L +A+ Sbjct: 373 AE----EKINNLAFYDPLTGLPNRRLLLDRLQHALASSARSGREGALLFIDLDNFKALND 428 Query: 410 VFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE--------NVQTFTRKIA 461 G D + ++R++ QR+A + I D ++++ + QT Sbjct: 429 TLGHDMGDLLLRQVAQRLASCVREGDSIARLGGDEFVVMLEDLGGHDLEAAAQTEAVGEK 488 Query: 462 MVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCD 517 ++ + A ++ +A+ + + F D Sbjct: 489 ILAMLGLPYQLVAHEYRCTPSIGATLFSGHELAKEELLKRADIAMYQAKQAGRNTVRFFD 548 Query: 518 DAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISP 577 + + + + + A++ + L YQ VD + LGAEAL RW+ ERG++ P Sbjct: 549 QQMQDAVTARVALEGELHKALDRQQFRLHYQIQVD-ASGRPLGAEALIRWMHPERGLVPP 607 Query: 578 LKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHER 637 +FI +AE+ I +G ++ TA + + + Q A D +L +NVS Q ++ F + Sbjct: 608 DQFIGMAEETDLILPIGQWVMDTACAQLKTWQQHAPT-RDLVLAVNVSATQFHQLDFVFQ 666 Query: 638 FTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRF 697 ++ + + L +E+TE+++ E + L++ GV+ S+DDFGTG S+L+ Sbjct: 667 VRATVQRHAIDPKLLKLELTESMLLENIEDTIRTMNALKEIGVQFSLDDFGTGYSSLQYL 726 Query: 698 YEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLG 755 + D IK+D F DI +IV I +A+ + VIAEGVE+E+ + L G Sbjct: 727 KRLPLDQIKIDQSFVRDIASDSNDREIVGTIIAMAQNLYLDVIAEGVETEEQRQFLQDNG 786 Query: 756 CVQAQGYLYQKPMPFSAWDKSGK 778 C QGYL+ KP+P ++ + Sbjct: 787 CTHFQGYLFGKPVPVEQFEAMLQ 809 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 709 bits (1831), Expect = 0.0, Method: Composition-based stats. Identities = 132/599 (22%), Positives = 239/599 (39%), Gaps = 39/599 (6%) Query: 207 LDQISANDEVLFLKQGHEIIAKNQLAREKLIIYN--SEGNYNIIDSVDTEYIEKTSAVPN 264 ++ +SA + + I + + KL+ + + +I D+E + + Sbjct: 650 MELVSACSHIAGIA----IERHHSEEQLKLLETSIARLNDIVLIAEADSEGKQNPRIIFV 705 Query: 265 NALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLA 324 N FE Y +L P + + V L+ + +E+ Sbjct: 706 NKAFERLMGYTAEEVLGKDPGFLDGPNTQMEELWRVKALL--KQGESVRTELVNYRKNGE 763 Query: 325 FLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMA 384 + D I + G +S++ I E K AE ++ L YD + + Sbjct: 764 EIWLEMD-ILPIANSAGVFTHWVSVQRDITERKAAES----RIQHLAFYDMLTNLPNRLL 818 Query: 385 IIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCC 435 +++ + A+ + L + + G D + ++ ++ QR+ Sbjct: 819 LLDRLEQALLNSMRLKRSGALLFLDLDNFKTLNDTHGHDFGDMLLEQVAQRLLNSVRITD 878 Query: 436 DIVTFNADLYLLLCRENVQTFTRKI--------AMVNDFDSSFGYRNLR----IHKSAIC 483 + D ++++ + ++ F Sbjct: 879 TVARLGGDEFVVVVENLSEQGCNAAQEASLVADKILLALSQPFRLSGYEHYSSCSIGVAL 938 Query: 484 E-PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGE 542 Q ++ LA+ + + F F D A I + + ++R A+ E Sbjct: 939 FCNEQQVTVDELLKRADLAMYEAKAAGRNTFRFFDPAMQALITKRAAMEEDLRQALRRDE 998 Query: 543 LFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAM 602 + L YQP VD ++LGAEAL RW ++G++SP FI +AE+ G I +G +++TA Sbjct: 999 MRLYYQPQVDSQ-GSLLGAEALVRWEHPQQGLLSPAAFIELAEETGLILPIGEWVLRTAC 1057 Query: 603 GEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIE 662 + ++ R +L +NVS QL++ F +R +I+KE G SL +E+TE+ + Sbjct: 1058 MQLVAWAGR-PETAGLVLSVNVSARQLHQHDFIDRVFSILKETGANPQSLKLELTESTLV 1116 Query: 663 RINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD--IFGTAG 720 E + L+ GV S+DDFGTG S+L + +K+D F D + Sbjct: 1117 ENIEEMITKMNILKAMGVGFSMDDFGTGYSSLAYLKRLPLSQLKIDRSFVRDVLVDSNDA 1176 Query: 721 KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKL 779 IV+ I L I V+AEGVES + + L K GC++ QGYL+ +P P ++ L Sbjct: 1177 SIVQTIIALGHGLGIEVVAEGVESWEQQQFLEKHGCLEYQGYLFGRPQPAEQLEREFGL 1235 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 709 bits (1830), Expect = 0.0, Method: Composition-based stats. Identities = 128/575 (22%), Positives = 232/575 (40%), Gaps = 31/575 (5%) Query: 222 GHEIIAKNQLAREKLIIYNSEGNYNII--DSVDTEYIEKTS--AVPNNALFEIYFYYPGG 277 I + + + +E Y I ++++ Y S + N + Y Sbjct: 127 EGFIQDVTERKQADEALREAERRYRSIFENAIEGIYQSTPSDGYLAVNPALARMYGYDSP 186 Query: 278 N-LLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEAL 336 L++ + + L LM F N + ++ ++ Sbjct: 187 QALISTLRDIDNQVYVDPQRRLEFKRLMAKHGVVTNFESRVHRRN--GEVIWISENARSV 244 Query: 337 KIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES-------- 388 +G +I E K E E + ++D +G + + Sbjct: 245 YNSDGTLLFFEGTVEAITERKLHEAE----IQFQATHDALTGLPNRTLLYDRMQQAVLHS 300 Query: 389 -NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLL 447 + A+ + L + + G +++++ QR+ + + D ++L Sbjct: 301 ERYGKLTAIAFLDLDQFKFINDSLGHQVGDELLKITAQRLTSCLRESDTVARQGGDEFVL 360 Query: 448 LCRENVQTFTRK---IAMVNDFDSSFGYRNLR----IHKSAICEPLQGENAWSYAEKLKL 500 L + ++++ + +L P G +A + + Sbjct: 361 LLTDQPNEEAITHTMQRVLHEVSQPWKANDLEFQITCSIGLTLCPDDGRDAETLLKNADS 420 Query: 501 AISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILG 560 A+ ++ + F + + + + + + +R A+ + L YQP V + + I+G Sbjct: 421 AMYKAKELGRNNFQYFSAEMNSSVTDRLELLNRLRQAITNEDFVLHYQPKVSLASHQIIG 480 Query: 561 AEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLL 620 AEAL RW SA G++SP FI +AE+ G I LG +++TA + R + + Sbjct: 481 AEALVRWNSAHSGMVSPASFIPLAEETGLIIPLGEWVLRTACRQNRAWQDAGY--PPIPI 538 Query: 621 HINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGV 680 +N+SP QL E I+ E GL+A L +EITE+V+ E + + QLR GV Sbjct: 539 SVNLSPRQLARGDIVEVVERILTETGLEAQHLELEITESVMTTDVEKSFALLTQLRSLGV 598 Query: 681 RISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVI 738 +IS+DDFGTG S+L D++K+D F DI + IV+ I L R + V+ Sbjct: 599 KISLDDFGTGYSSLSYLKRFPVDTLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVL 658 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 AEG+E+ED + L+ GC + QGYL KP+P + Sbjct: 659 AEGIETEDQFQFLLANGCDEGQGYLMSKPVPNKNF 693 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 709 bits (1830), Expect = 0.0, Method: Composition-based stats. Identities = 161/779 (20%), Positives = 296/779 (37%), Gaps = 64/779 (8%) Query: 22 SFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKDIERSALTLKDSLYLLKNTEEI 81 + I + + +E +QK + +I L +L + Sbjct: 591 LYCSPQEFIGRTVQEVLPESVGNLLYEGVQKALVS--GEIVSIEYFLIIALQ-----KRF 643 Query: 82 QRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLVDE-SGRVIFA 140 A I+++ + + V + D + L R + +++ NG L+ + G+V+F Sbjct: 644 FDARIVRLSPVETIAVVRDISDRKQTELALRESEERLKTIISTNPNGLLILDLQGKVLFV 703 Query: 141 DFNPSK---RPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVD 197 + R N + + I L+ V V Sbjct: 704 NPAAEILFGRKQEDLMGQIL-GIPIIVNNYSE---------IEILQPSGKLIIVRMRLVK 753 Query: 198 LNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIE 257 + W+ N +L + +V ++Q E + A E+ + + I D+ T Sbjct: 754 IIWQEKNAFLASLV---DVTDIQQAQEQLKILYQATEQSPV-----SVVITDAEGTIEYV 805 Query: 258 KTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMT 317 N FE Y ++ + ++ L T + E Sbjct: 806 -------NPKFEKITGYQRAEVIGQNPRI--LKSGETTTEEYKQIWKTITSGQEWHGEFH 856 Query: 318 ELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQES 377 ++ I +K EG +++K I E K + L +YD + Sbjct: 857 NKKKNGELFWEA-ASISPIKNAEGIITHFVAVKEDITERKAQQTT----LTYQANYDALT 911 Query: 378 GFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIA 428 G I+ + +AV I L + V G + + +++K+ QR+ Sbjct: 912 GLPNRFLAIDRLKQAILQADRQKKRVAVMFIDLDHFKDVNDTLGHEYGDLLLQKVSQRLK 971 Query: 429 EKYAQCCDIVTFNADLYLLLCRENVQTFT---RKIAMVNDFDSSFGYRN----LRIHKSA 481 + + + D +L++ +T +++ + F + Sbjct: 972 QCLRKSDTVARLGGDEFLIILPNLRETHHCKLIASKILSSLEKPFNLLTEEAFISASIGI 1031 Query: 482 ICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIG 541 P G + A+ + ++F F E + + I + +R+A++ Sbjct: 1032 TLYPDDGNDVSVLMRNADAAMYLGKRGGRNDFKFYTMGMNEEAQSRLRIEKLLRYALKKN 1091 Query: 542 ELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTA 601 E +LVYQPI+D+ + ++GAEAL RW + E G +SP +FI+IAE+ G I+ELG +I A Sbjct: 1092 EFYLVYQPIIDLRFQTVIGAEALLRWNNPELGRVSPDQFISIAEETGLISELGAWVISQA 1151 Query: 602 MGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVI 661 E ++ + + +N+SP Q E E + + NG+ + L +EITE ++ Sbjct: 1152 CQEVVNWQTQG---SPIWVAVNLSPRQFRESKLLEIISNAITLNGITNHYLELEITEKLL 1208 Query: 662 ERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG- 720 IEQL + R+SIDDFGTG S L + + +K+D F DI Sbjct: 1209 LEDFPGSKGIIEQLHEMDFRLSIDDFGTGYSALSYLIKFPFNRLKIDRSFIADIPHNQEV 1268 Query: 721 -KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 +V+ I + ++ VIAEGVE+ + A L GC AQGY + +P+ + + + Sbjct: 1269 LALVKTIIAMGHGLKLQVIAEGVETTEQANILEAEGCDYAQGYFFSRPLLSEEFRRYLQ 1327 >UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E9L8_GEOLS Length = 631 Score = 708 bits (1828), Expect = 0.0, Method: Composition-based stats. Identities = 104/464 (22%), Positives = 198/464 (42%), Gaps = 25/464 (5%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES----- 388 LK +G ++ + I E + A + ++ L +D +G + + + Sbjct: 160 TPLKNHDGAISRVVLLYTDITERRAA----AEEIERLAFFDSLTGLPNRVLLKDRLAQLL 215 Query: 389 ----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 N+ +A+ I L + V G +++++ + +R+ C + D Sbjct: 216 TRAGRYNEMVAILFIDLDRFKEVNDTLGHGTGDQLLQVVSERLTACLRSCDTVARLGGDE 275 Query: 445 YLLLCRENVQTFT---RKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEK 497 +++L + ++ + P+ G++ + + Sbjct: 276 FVVLLPGITERDCVGDIAAKLLQSLCKPVQLDAREVFTSGSIGISLWPIDGDSVSTLFKN 335 Query: 498 LKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 A+ ++ + + F E + ++ ++R+A+E GEL L YQP V T Sbjct: 336 ADTAMYHAKEQGRNTYRFYTPQMHATSMEQLTLSNDLRYALERGELHLCYQPQVSFETGG 395 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 ++G EAL RW+ + G+I P +FI +AED G I +G ++ A + + + Sbjct: 396 LIGVEALLRWIHPKLGMIPPDRFIPLAEDTGLIVPIGTWVLHEACRQAMMWVAQGL--PS 453 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK 677 + +N+S Q E F + +++ GL N L +E+TE ++ L ++ L+ Sbjct: 454 LRVAVNISAKQFRESDFSDTVKAVLQTTGLAPNLLELELTEGMLIENVTQTKLTLQSLKD 513 Query: 678 QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF---GTAGKIVRIIFDLARYNR 734 GV ++IDDFGTG S+L D +K+D F +I G A IV + L + Sbjct: 514 MGVTLAIDDFGTGYSSLSYLKHFPLDRLKIDKSFVKEIAEKSGDAAAIVEAVVALGHSLK 573 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 + VIAEGVE +D L C + QGY + +P+ A ++ + Sbjct: 574 LTVIAEGVEQQDQVDFLHNRKCDELQGYFFSRPLTPQALEELLR 617 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 708 bits (1828), Expect = 0.0, Method: Composition-based stats. Identities = 118/604 (19%), Positives = 229/604 (37%), Gaps = 41/604 (6%) Query: 196 VDLNWRYLNEYLDQISANDEVLFLKQGH--EIIAKNQLAREKLIIYNSEGNYNIIDSVDT 253 +L Y + + + + + + L + +S + D Sbjct: 449 SELYVDYSSHPIRSHGEMEGAVVVFEDISERRQKDEALKLASSVYQSSNDGILVTD---- 504 Query: 254 EYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQF 313 EK + N F Y ++ +F + Sbjct: 505 ---EKNRILDVNPAFTRITGYTLEDVRGKDPGIF--QSGKHDAQFYQQMWQSILDDGHWQ 559 Query: 314 SEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISY 373 E+ +L I ++ +G + + I E K + + ++ Sbjct: 560 GEIWDLKKNGELHAKWL-SISVIRRADGSIYRHVGQFSDITEKKR----KDELIWEQANF 614 Query: 374 DQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLC 424 D + + + +Y A+ + L + + FG +K++ ++ Sbjct: 615 DTLTNLPNRRLFADRFRQAISAGARSGRYGALLSLDLDQFKRLNDTFGHSMGDKLLIEVA 674 Query: 425 QRIAEKYAQCCDIVTFNADLYLLLC----RENVQTFTRKI----AMVNDFDSSFGYRNLR 476 +R+ + + D +L++ E + R + N+ + Sbjct: 675 RRLTSCVREEDTVARMGGDEFLVILNGLGSEQNEAAIRAELIAEKIRNELCRPYQLDKTE 734 Query: 477 I----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIAR 532 + ++ + A+ + + F D + +E+ + Sbjct: 735 HHSSSSIGIVLFRGHSDDPERLLAHVDTAMYQSKAKGRNAICFFDSSMQEILEKRGQLET 794 Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 +R A+E E L YQ +D ++ +GAEAL RW +A+ G +SP++FI +AE+ G I Sbjct: 795 ALRGALERKEFLLHYQLQMD-SSGRPIGAEALLRWNNAKLGSVSPVQFIPVAEESGLILP 853 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 +G+ +++TA + + + + +NVS Q E F + +++++G++ L Sbjct: 854 IGHWVLETACAQLARWQSD-PRFNRLCIAVNVSAIQFREAAFVAKVRNVLQQSGIQPWLL 912 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +E+TE+++ L +E L+ GV+ S+DDFGTG S+L + D +K+D F Sbjct: 913 KLELTESLVLDDINDSILKMEALKNLGVKFSMDDFGTGYSSLSYLSRLPLDQLKIDQSFV 972 Query: 713 GDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPF 770 DI IV+ I +A + VIAEGVE+E+ L GC QGYLY KPMP Sbjct: 973 RDITTDQHDAAIVQTIISMALSLGMEVIAEGVETEEQREFLDLRGCQAYQGYLYAKPMPI 1032 Query: 771 SAWD 774 + Sbjct: 1033 EELE 1036 >UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H6_9PROT Length = 837 Score = 707 bits (1827), Expect = 0.0, Method: Composition-based stats. Identities = 131/590 (22%), Positives = 247/590 (41%), Gaps = 39/590 (6%) Query: 222 GHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSA-------VPNNALFEIYFYY 274 + + N+L ++++ N I + E E + N F+ Y Sbjct: 254 EGKTLLSNRLLKQQIEDRKQAENQLRIAATAFETHEAIMITDAHANIIRVNQAFQNITGY 313 Query: 275 PGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIE 334 +++ + ++ L E+ + P I Sbjct: 314 SPEDVIGKNPRV--LSSGRQGSEFYAAMWKRLLGSGSWTGEIWDKRKNGEVYPKWL-TIT 370 Query: 335 ALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES------ 388 A+K EG E ++I + I K AE ++ +L YD + +++ Sbjct: 371 AVKDNEGVTTEYVAIFSDITLRKHAE----EEIYTLAFYDSLTKLPNRRHLLDRINQARS 426 Query: 389 ---NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLY 445 +N Y A+ + + + + G D + + ++ +R+ + D + Sbjct: 427 ISARSNHYGALLFLDMDRFKILNDTLGHDYGDLFLVEVSRRMRNCVRDMDTVARIGGDEF 486 Query: 446 LLLCRE---NVQTFTRKIAMVN-----DFDSSFGYRNLRI----HKSAICEPLQGENAWS 493 ++L E + + + K+A++ + ++ E+ + Sbjct: 487 VVLIEEIGTDNEEVSTKVALIAEKIRAALTEPYLLKDKEHHSSPSIGVCLYLGNEESVDT 546 Query: 494 YAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDI 553 LA+ ++ + F D A +E + ++RHA+ +L L YQ + Sbjct: 547 LLRHADLAMYQAKESGRNGVRFFDPAMQLAVETRAALEADMRHAVTGKQLRLYYQIQL-T 605 Query: 554 NTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRAS 613 + LGAEAL RW+ RG++SP +FI IAE+ I E+G+ +++TA + +S+ Sbjct: 606 SDHRPLGAEALIRWMHPVRGLVSPAQFIPIAEESSLILEIGHWVLETACKQLVLWSKHE- 664 Query: 614 LKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIE 673 + +L INVS Q N+ F + +T++ + L N L +E+TE+V+ + Sbjct: 665 RTRNLILAINVSAQQFNKHDFVDTVSTLLHLHQLNPNRLKLELTESVVLSDVADVVSKMH 724 Query: 674 QLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLAR 731 L+ GV++++DDFGTG S+L ++ D IK+D F D+ +V+ I +LA Sbjct: 725 ALKALGVKLALDDFGTGYSSLSYLKQLPLDQIKIDRSFVSDVTTDPSDAVMVQTIINLAH 784 Query: 732 YNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVK 781 R+ VIAEGVE+ED L + GC+ QG+L+ KPMP ++ + Sbjct: 785 NFRMNVIAEGVETEDQLNFLKQNGCMAYQGFLFGKPMPIDEFEALLGQTQ 834 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 707 bits (1826), Expect = 0.0, Method: Composition-based stats. Identities = 124/637 (19%), Positives = 243/637 (38%), Gaps = 40/637 (6%) Query: 164 YNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLN-WRYLNEYLDQISANDEVLFLKQG 222 + F H ++ + ++ +V L+ W ++ Y + V F Sbjct: 423 WEEFKETAGTTFDREYHRALMENRTVTFEEFYVPLDEWFEVHAYPSEEGLT--VYFRDIT 480 Query: 223 HEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNA 282 ++ + I + + N E + + ++ Sbjct: 481 ERKESEQARQEAHVRIRQQASLLDKATDAIIVFGMDNCIEFWNQGAERLYGWTSEEVMGR 540 Query: 283 SDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGD 342 ++ Y + + E+ + + L + ++ +G+ Sbjct: 541 EVEMLYDN-----VAVFDEANRALLSSGEWRGELAQRRRDQSML-NVEAHWTLVRNDDGE 594 Query: 343 AKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQY 393 + I +I I + K AE N++L L YD +G +++ N + Sbjct: 595 PQAIFAINTDITQRKSAE----NEILHLALYDSLTGLPNRRLLLDRLGHALAVSARNQRM 650 Query: 394 LAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC---- 449 A+ I L + + G D + ++R++ R++ + + D ++++ Sbjct: 651 GALLFIDLDNFKLLNDTLGHDMGDLLLRQVAPRLSSCVRESDTVARLGGDEFVVILMGDF 710 Query: 450 -RENVQTFTR----KIAMVNDFDSSFG----YRNLRIHKSAICEPLQGENAWSYAEKLKL 500 ++ + T+ + + F F ++ Q + ++ L Sbjct: 711 GEDHDEALTQISTICERIRSAFIQPFNLDPYIHHITPSIGIALFNDQSQTTNELLKRADL 770 Query: 501 AISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILG 560 A+ + + F D + + + + E E L YQ VD +R I+G Sbjct: 771 AMYQAKASGRNAMRFFDPDMQAAMNARAILESELYKSWERNEFILHYQLQVD--SRGIIG 828 Query: 561 AEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLL 620 AEAL RW RG++ P +FI AE+ G I LG +++TA + ++ + L Sbjct: 829 AEALVRWQHPRRGLLPPSEFIPQAEETGLILPLGEWVLETACNQLASWALQ-PETVQLNL 887 Query: 621 HINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGV 680 +NVS Q +P F E+ +I+ G L +E+TE+++ + + L+ +GV Sbjct: 888 SVNVSSLQFCQPDFVEQVISILDRTGANPQRLKLELTESILVHDMDDTIAKMMTLKARGV 947 Query: 681 RISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVI 738 ++DDFG G S+L + D +K+D F D+ IVR I LA+ + VI Sbjct: 948 GFALDDFGIGYSSLYYLKRLPLDWVKIDRSFVRDVLTDNNDATIVRTILLLAKSMGLAVI 1007 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 AEGVE+ L GC QGYL+ +P+P +++ Sbjct: 1008 AEGVETGAQKDFLASHGCTAYQGYLFSRPLPLEQFER 1044 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 707 bits (1826), Expect = 0.0, Method: Composition-based stats. Identities = 124/592 (20%), Positives = 225/592 (38%), Gaps = 36/592 (6%) Query: 211 SANDEVLFLKQGHEIIAKNQLA-REKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFE 269 A ++ L + ++Q + +++ +I V N F Sbjct: 405 GAKPRIILLSRDITERKRSQEQLQLTAQVFDQSSEAIVIADASHRI------VRINRAFS 458 Query: 270 IYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDS 329 Y + S +L + A VY R R E + P Sbjct: 459 RITGYQESEAVGQSVRLLTMAEAGPDCNADAVYARLARQER-WEGESWGRRKDGSGYPQW 517 Query: 330 TDQIEALKI--REGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE 387 + +++ G I++ I+ ++A+ ++ L +D + + + E Sbjct: 518 L-SVSSVRDGDANGPITHSITLFRDISLQREAQ----ERIQRLAHFDPLTDLPNRVLLAE 572 Query: 388 SNNNQ---------YLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIV 438 Q LA+ + L + V G + ++ + +R+ + Sbjct: 573 RTQRQIAQEQARGGQLALLFLDLDHFKNVNDSLGHRIGDILLVAVARRLQSLIGPQDTVS 632 Query: 439 TFNADLYLLLCR--ENVQTFTRKIAMVNDFDSSFGYRNLRIH----KSAICEPLQGENAW 492 D +LLL A++ F + P GE+ Sbjct: 633 RLGGDEFLLLLPATSAAHAAKVASALLTAVAQPFQIDPYELSTTLSVGIAMCPADGESFD 692 Query: 493 SYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVD 552 + ++ A+ S + + + F + I +R A+E + L YQP V Sbjct: 693 TLYQRADAAMYSAKQSGRNRYGFFTADLQARTARALQIENALRRALERQQFELHYQPQVS 752 Query: 553 INTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRA 612 + T ++GAEAL RW E G+++P +FI +AE+ G I LG ++ TA + + + Sbjct: 753 LGTGQVVGAEALLRWHHPELGVVAPAEFIPVAENSGQIVALGEWVLHTAARDAKRWLDMQ 812 Query: 613 SLKDDFL-LHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLN 671 + +N+S Q P E T +++ GL A L +E+TE Sbjct: 813 L---PLRAVSVNLSAVQFRHPQLPEMVTRCLQQAGLPARRLELELTEGAAVDDPVAALAM 869 Query: 672 IEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDL 729 ++QL +GVR+S+DDFGTG S+L +K+D F D+ IV I + Sbjct: 870 MDQLHDRGVRLSMDDFGTGYSSLSCLKRFQIYKLKIDQSFVRDLDDDANDRAIVSAIIRM 929 Query: 730 ARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVK 781 A+ + AEGVE++ + L GC + QGYL+ +P+P A++ + +K Sbjct: 930 AQALGMQTTAEGVETDGQLQFLRAQGCDEGQGYLFSRPLPADAFEAYLRAMK 981 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 706 bits (1823), Expect = 0.0, Method: Composition-based stats. Identities = 114/568 (20%), Positives = 227/568 (39%), Gaps = 31/568 (5%) Query: 230 QLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYL 289 Q + +L E + I D + + N +E Y ++L + Sbjct: 229 QENQLRLWAKVFEASNEAILITDANF----RIISVNRAYETIMGYREQDVLGV--DTLEV 282 Query: 290 PFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISI 349 + + E+ + P + + G+ + I+I Sbjct: 283 GAKLQTYSFYRNLVSLLKERGHWQGELINQRKSGEEFPSW-FSVTQVTNSRGEPEHYIAI 341 Query: 350 KNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIK 400 N I E K++ ++ L +D +G + + + + L + I Sbjct: 342 FNDITEHKNSRA----QIEFLAHHDALTGLPNRILLNDRLEMAITQVRRQGEKLGILFID 397 Query: 401 LCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRK- 459 L + V G ++I+++ +R+ + D +++L Sbjct: 398 LDRFKNVNDSLGHGVGDQILQEAAKRLTANVRTGDTVSRLGGDEFVVLFPRVRTEGNLAD 457 Query: 460 --IAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEF 513 I + + + + P GE+ + + A+ ++ + + Sbjct: 458 LTIKLREQLQLPYTVDGISLHITPSIGIAVYPDDGEDPNTLIKNADAAMYLAKEKGRNNY 517 Query: 514 IFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERG 573 F + + + + ++R A++ G+ L YQP + ++ + G EAL RW ERG Sbjct: 518 QFYTPTLNAKTLDRLKLESDLRSAIDAGDFELHYQPQIIGSSGQLWGLEALIRWRHRERG 577 Query: 574 IISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPH 633 +ISP +FI +AE+ G I LG ++ A+ + + ++ + ++ +N+S Q + Sbjct: 578 LISPAEFIPLAEETGLIVGLGDWVLVQAVKQLAEWRRQG--HNHLVVSVNISALQFRQGD 635 Query: 634 FHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSN 693 F +R I++E L +++ +E+TET++ + + ++ LR+ G RI+IDDFGTG S+ Sbjct: 636 FLDRVKHILQEAQLVPDAIELELTETMLMQDVQSAIQTLKGLRELGFRIAIDDFGTGFSS 695 Query: 694 LKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVAREL 751 L + + +K+D F ++ IV I LA+ IAEGVE+ L Sbjct: 696 LNYLRHLPINVLKIDQSFVREMLQEPESLAIVESIIALAQALGKETIAEGVETRAEFDVL 755 Query: 752 IKLGCVQAQGYLYQKPMPFSAWDKSGKL 779 GC QGY + +PMP +D+ + Sbjct: 756 QARGCRLMQGYFFARPMPPVIFDQWYQQ 783 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 706 bits (1823), Expect = 0.0, Method: Composition-based stats. Identities = 121/596 (20%), Positives = 225/596 (37%), Gaps = 33/596 (5%) Query: 200 WRYLNEYLDQISANDEVLFL-KQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEK 258 L D E++ + ++ + R ++ S + +I + + I Sbjct: 746 EDQLTLTRDNNGKPLEIVGAWLDITDRLSAEEKLRLNAKVFESSRDGIVITDKNNKIIS- 804 Query: 259 TSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTE 318 N F Y ++ + + + V E+ Sbjct: 805 -----VNNAFTTITGYEAKEVVGKNPHMLASEKLEE--SFYSAMWDSIGVMGYWQGEVIN 857 Query: 319 LVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESG 378 I +K +G + I I + I+E K AE ++ L ++D + Sbjct: 858 QRKNGEIYTQWL-SISTIKDADGKISQHIGIISDISERKVAE----ERIQFLSNFDPLTN 912 Query: 379 FIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAE 429 + + + + + L + + G +++V++L +R Sbjct: 913 LPNKNLLNDRTKLALATAKRLKTAVTLMFVDLDRFKFINESLGPSIGDQVVKELAERFVA 972 Query: 430 KYAQCCDIVTFNADLYLLLCRENVQTFTRKI--AMVNDFDSSFGYRNLRI----HKSAIC 483 + D ++LL + +++ F + +I Sbjct: 973 YMRPEDTVCRQGGDEFILLLPNTDAEGAAHVAKKLLDIVAQPFNFHGQKIVLTASIGISA 1032 Query: 484 EPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGEL 543 P GE+ A+ A+ + + F F + + + + +R A+E E Sbjct: 1033 YPQDGESFEQLAQSADAALYRAKYEGRNNFQFFARQMHEQAHDILLLESELRSAIEHEEF 1092 Query: 544 FLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMG 603 L YQP D T I+G EAL RW E+G++SP FI IAE+ G I E+G +++TA+ Sbjct: 1093 LLYYQPQYDSKTSKIIGLEALIRWQHPEKGLVSPAVFIPIAEESGLIAEIGDWVLRTAVK 1152 Query: 604 EFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIER 663 + + + + +N+S Q ++ + I+++ + + L +E+TE + Sbjct: 1153 QLASWQEAGLGAVP--VAVNLSVVQFHQDTLYGSVCQILRDTKVDPSMLELELTEGIAME 1210 Query: 664 INEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGK 721 +E + QL GVR+SIDDFGTG S+L + D +K+D F I Sbjct: 1211 DSERTLNVLNQLNSLGVRLSIDDFGTGYSSLSYLKKFKIDKLKIDQSFVRGIGSHPQDAA 1270 Query: 722 IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 I+ I +A+ IAEGVE+ + LI C + QGY + KP+P + K Sbjct: 1271 IITAIISMAKSLSFKTIAEGVETLEQLNFLIANSCDEIQGYYFSKPLPSTEVTKLL 1326 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 706 bits (1822), Expect = 0.0, Method: Composition-based stats. Identities = 114/593 (19%), Positives = 225/593 (37%), Gaps = 51/593 (8%) Query: 207 LDQISANDEVL---FLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVP 263 L I + ++ ++Q I A ++E +++ N N ++ + Sbjct: 392 LRMIGTHTDITERKKIEQQLRIAATAFESQEGIVVTNENFNILRVNQAFID--------- 442 Query: 264 NNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTL 323 Y + L + R E+ Sbjct: 443 -------ITGYEAEEATGKKPNI--LKSGRQSGEFYRNIYTSLRETGSWSGEIINRRKNG 493 Query: 324 AFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNM 383 P+ I A+K +G + + I+ K A S ++ +L +D + Sbjct: 494 EIYPE-HLTITAVKDADGQTTNYVGMFTDISVAKAA----SERIENLAFFDPLTNLPNRR 548 Query: 384 AIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQC 434 + + Y A+ + L +++ G D + +++++ R++ + Sbjct: 549 LFSDRLTQALVNSTRSGNYGALVFLDLDHFKSLNDTLGHDYGDMLLKQVALRLSNCVREG 608 Query: 435 CDIVTFNADLYLLLCRE------NVQTFTRKI--AMVNDFDSSFGYRNLRI----HKSAI 482 + D ++LL I ++ + + ++ Sbjct: 609 DSVARLGGDEFVLLVENLSANDVEAAHQIEAIGDKILMSLNQPYQLQSHEYLSTPSIGIS 668 Query: 483 CEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGE 542 E++ + +A+ + + F D I + + R ++ A+E + Sbjct: 669 LFNGHQESSEDLLKHADIAMYQAKKAGRNTLRFFDPLMQETINMRVDLERELKKAIEQKQ 728 Query: 543 LFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAM 602 L YQ ++ GAEAL RW ERGIISP++FI +AE+ G I ++G ++ A Sbjct: 729 FELYYQVQMNSA-GQPSGAEALIRWRHPERGIISPIQFIPVAEETGLITQIGEWVLNQAC 787 Query: 603 GEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIE 662 + + + DF L INVS Q +P F + ++ + L +E+TE+++ Sbjct: 788 LQLQAWQLDQ-ASKDFSLAINVSAKQFLQPDFANQVKNSIRSFHIDNTKLKLELTESMLI 846 Query: 663 RINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG-- 720 E+ + L + G++ S+DDFGTG S+L+ + +K+D F D+ Sbjct: 847 DNIEYVIHTMNTLGEIGIQFSLDDFGTGYSSLQYLKMLPLSQLKIDQSFVRDLATDNSNK 906 Query: 721 KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 IV I +A + VIAEGVE+++ + L GC QGY + +P+ + + Sbjct: 907 TIVLTIITMAHSLGLNVIAEGVETDEQLQLLNAHGCGNYQGYYFSEPLSINEF 959 >UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BF2_DECAR Length = 1038 Score = 705 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 146/725 (20%), Positives = 270/725 (37%), Gaps = 61/725 (8%) Query: 73 YLLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLVD 132 YL+++ + A+ + ++ L +D N F +++ + ++V G Sbjct: 340 YLIRSKRLVGAALRERASLLDSLGEGVYGIDQNGQCTFINPKALEMLGWTADEVIGSDQH 399 Query: 133 ESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVD 192 A F+ + S+ + + R G++ KD V Sbjct: 400 -------ARFHHHRPDGSIYPSADCPVYQTLRDGQRRQGEE------WFFNKDGRGFPVQ 446 Query: 193 KIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVD 252 ++ Q V+ + E ++L R I + ++ + D+ Sbjct: 447 YSVTPIS--------RQEDKEGAVVTFRDISEARKADELMRIAAIAFETQEAMLVTDA-- 496 Query: 253 TEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQ 312 K+ + N F Y + + L + + + + Sbjct: 497 -----KSQILRVNRAFTEVTGYSAAEAIGQTPALLKSGYHEDSFYKDL--WTSLKENGLW 549 Query: 313 FSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLIS 372 E+ P+ I A++ + G+ +S I + K+AE ++ L Sbjct: 550 RGEIWNRRKNGEIYPEWL-TISAVRGQHGEITHFVSSFLDITKRKEAE----EQIQFLAL 604 Query: 373 YDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKL 423 YD + + E ++ A+ I L + + G D + ++R++ Sbjct: 605 YDPLTHLPNRRLLNERLSKALTSSGRQRRHAALLFIDLDNFKMINDSMGHDIGDLLLRQV 664 Query: 424 CQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTR--------KIAMVNDFDSSFGYRNL 475 R+ E + D +++L E M++ + + Sbjct: 665 ALRLRESVRSNDTVSRLGGDEFVILLEELSPNIHDATTQIEHIAQKMLDSLVQPYKFGEF 724 Query: 476 RIHKSAICE--PL-QG-ENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIA 531 H +A P E S + +A+ + + F D A E+E + Sbjct: 725 SHHCTASIGAIPFMDATETIESLLKSADMAMYKAKAAGKNRLFFFDPAMQTEVEARAALE 784 Query: 532 RNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFIN 591 R++R A + L QP VD + + GAEAL RW G+I P +F +AE+ I Sbjct: 785 RDLRQAQREKQFVLYLQPQVD-QSGHVSGAEALIRWQHPTHGLILPGEFTHVAEETRLIL 843 Query: 592 ELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANS 651 +G +++ A + + + L INVS Q P F + + E+G A+ Sbjct: 844 PIGQWVLEEACKQLVIWQKN-PDTAHLTLAINVSALQFRNPDFVDDVARAIHESGALASR 902 Query: 652 LCVEITETVIERINEHFYLNIEQLR-KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQ 710 L +EITE+++ + ++ L+ + GV +S+DDFGTG S+L ++ D IK+D Sbjct: 903 LKLEITESLLLEDIDGTIERMQVLKNQLGVGLSLDDFGTGYSSLSYLKQLPLDQIKIDRS 962 Query: 711 FTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 F DI I + L R + VIAEGVE+ + LI GC+ QGYL+ +P Sbjct: 963 FVKDIHCNPNDAAIAEAVIALGRSFSLNVIAEGVETIEQRDALIARGCLTFQGYLFGRPG 1022 Query: 769 PFSAW 773 P A+ Sbjct: 1023 PIDAF 1027 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 705 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 107/466 (22%), Positives = 205/466 (43%), Gaps = 24/466 (5%) Query: 331 DQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES-- 388 + ++ + I E+K + L ++ YD +G + Sbjct: 390 GTVAPIRNDSDVIIGTVVALKDITEIKK----KDEILYNMEYYDPLTGLPNRSLFSDRLK 445 Query: 389 -------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFN 441 NN+ A+ I+ L +A+ G + +++++ ++I + + Sbjct: 446 MALAQSKRNNEMCALIILDLDNFKAINDTLGHSVGDMLLKQVAEKIKGYLREVDTVARIG 505 Query: 442 ADLYLLLCR---ENVQTFTRKIAMVNDFDSSFGYRNLRIHK----SAICEPLQGENAWSY 494 D ++++ + ++ F + + P GE+ + Sbjct: 506 GDEFIIIQPQIKDINDATRAADRILKKFQQPWILEGKEYYITASMGIGIYPNGGEDPQTI 565 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 + A+ ++ + + ++ ++ + + I ++R A+E E L YQP +DI Sbjct: 566 FKNADTALYRAKELGRNNYQLYTESMNQKVLQRLDIENSLRRAIEKEEFVLFYQPQIDIK 625 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 T I+G EAL RW + G++ P++FI +AED G I +G +++TA + + + + Sbjct: 626 TGKIVGFEALLRWYHPDYGLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIECGLE 685 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 L+ +N+S Q + E I GL L +EITE+ + + Q Sbjct: 686 PH--LISVNLSARQFQRSNIVEVIDRIRSSTGLAPELLELEITESTAMQDLSFTIDVLNQ 743 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARY 732 LRK+G+R+S+DDFGTG S+L ++ D++K+D F DI + I + + LA Sbjct: 744 LRKKGIRVSLDDFGTGYSSLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLAHK 803 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 + V+AEGVE+++ L K C +AQGYL+ KP+P +K + Sbjct: 804 LDLTVVAEGVETKEQLLFLKKEKCDKAQGYLFSKPLPAEEIEKMLR 849 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 705 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 111/541 (20%), Positives = 215/541 (39%), Gaps = 32/541 (5%) Query: 261 AVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELV 320 + N F Y + + KL L + E+ Sbjct: 474 ILRVNQAFTDITGYAADECIGQTPKL--LSSGRHDASFYAAMRESIERNGVWQGEIWNRR 531 Query: 321 NTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI 380 P+ I +++ +G +S ++ K A+ ++ L YD +G Sbjct: 532 KNGDVFPEWL-TISSVRDGDGVVTHYVSALTDMSAHKAAQ----EEIRHLAFYDALTGLP 586 Query: 381 KNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKY 431 + + + + A+ I L + + G D +++++++ QR++ Sbjct: 587 NRRLLHDRLRVAIASSVRSERQGALLFIDLDNFKTLNDTLGHDMGDRLLQQVGQRLSSSV 646 Query: 432 AQCCDIVTFNADLYLLLCRENVQTFTRK--------IAMVNDFDSSFGYRNLRI----HK 479 + + D ++++ + ++ + + Sbjct: 647 REGDTVARLGGDEFVVMLENLGERPEEAAGQSRIVGEKIIKLLNRPYDLSGHDYHNTPSV 706 Query: 480 SAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAME 539 Q ++ LA+ + + F D + I +++R A+ Sbjct: 707 GITLFGGQQVGIDELMKRADLAMYEAKASGRNALRFFDPRMQAVVTARADIEKDLRAAVG 766 Query: 540 IGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIK 599 FL YQP VD + ++GAEAL RW +RG +SP +FI +AE+ G I LG +++ Sbjct: 767 RQSFFLAYQPQVD-ASGQVIGAEALLRWQHQQRGTVSPAEFIPVAEETGLILPLGLWVLE 825 Query: 600 TAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITET 659 TA + ++ F + +NVS Q + +F ++ ++ +G +L +E+TE+ Sbjct: 826 TACAQAAL-WAARPGRERFTVSVNVSARQFRQANFVDQVLAVLARSGAHPRNLKLELTES 884 Query: 660 VIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA 719 ++ + + L+ +GV S+DDFGTG S+L ++ D +K+D F D+ Sbjct: 885 MLLDNVQDIIAKMSALKARGVGFSLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDLLTDP 944 Query: 720 GK--IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 I R I LAR + VIAEGVES + L GC+ QGYL+ +P+ + ++ Sbjct: 945 NDEVIARTIIALARTLGLSVIAEGVESVEQQDALAAQGCLAYQGYLFSRPLALADFEAFL 1004 Query: 778 K 778 + Sbjct: 1005 R 1005 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 705 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 114/457 (24%), Positives = 192/457 (42%), Gaps = 24/457 (5%) Query: 336 LKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES------- 388 + EG + I E D + N+L L ++D +G + Sbjct: 408 VYDDEGKPLLLRGTAQDITERHDYQ----NRLRHLANFDPVTGLPNRTLFKDRLQHALAN 463 Query: 389 --NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYL 446 N + +A+ + + + V G ++++R+ +R+ + + F D ++ Sbjct: 464 ATRNQRLVALLFLDMDQFKNVNDSLGHMMGDELLRQTAERLLGCVREGDTVARFGGDEFI 523 Query: 447 LLCRE---NVQTFTRKIAMVNDFDSSFGYRNLR----IHKSAICEPLQGENAWSYAEKLK 499 +L + Q +V F + P E+ Sbjct: 524 ILLENIEHSEQASLSAERVVQAMRRPFRLGEHEHFCNVSIGISLYPEDDEHPEDLVRHAD 583 Query: 500 LAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAIL 559 A+ + + + F E + + + A+E+G+ + YQP +D+ + I Sbjct: 584 SAMYLAKAQGGAGYRFYTPDMNTRAMERLLLQNQLHQALELGQFQVHYQPQMDLRSGRIC 643 Query: 560 GAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFL 619 G EAL RW ERG++ P +FI +AED G I LG +++TA E R + R Sbjct: 644 GVEALVRWQHPERGLVPPAEFIPMAEDTGLIEPLGEWVLRTAAREVRGWQDRGL--PALN 701 Query: 620 LHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQG 679 L +N+SP Q P ++ E+GL+A L +EITE +I EH + ++ + G Sbjct: 702 LSVNLSPRQFRHPDLPGMVERVLAESGLEAERLELEITERLIIVDLEHTVDTLSRIARLG 761 Query: 680 VRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPV 737 VR+SIDDFGTG S+L + ++K+D +F I I + L R R+ V Sbjct: 762 VRVSIDDFGTGHSSLAYLKRLPVHALKIDREFVDGIGQDSDDAAIAEAVIALGRTLRLQV 821 Query: 738 IAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 IAEGVE+ + A L + GC QG+ +PMP Sbjct: 822 IAEGVETREQASFLREHGCDAVQGFFIARPMPAGELT 858 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 705 bits (1820), Expect = 0.0, Method: Composition-based stats. Identities = 119/580 (20%), Positives = 225/580 (38%), Gaps = 34/580 (5%) Query: 218 FLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGG 277 L + + + R +++S +I + V N F Y Sbjct: 576 VLTDLTDRLQAEERLRLAAQVFDSTQEGVMITDA------RRRIVSVNRAFTTLLGYTET 629 Query: 278 NLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALK 337 +L + ++ L E+ + +P+ I A++ Sbjct: 630 EVLGQTPRM--LSSGRHDRDFYEAMQAQLDHTGLWQGEIWNRHKDGSPVPE-LLSISAVR 686 Query: 338 IREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--------- 388 G + + I +K++E +L L +D + + Sbjct: 687 DPHGQVTHYVGVFTDITHLKESEA----RLEFLAHHDPLTHLPNRLLFNNRLDQALHQAE 742 Query: 389 NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL 448 + LAV ++ L + + +G +++++ + QR+ ++ Q + D + LL Sbjct: 743 REGRRLAVLLLDLDRFKDINDSYGHLAGDELLKYVAQRLTQRLRQSDTLARLGGDEFALL 802 Query: 449 ---CRENVQTFTRKIAMVNDFDSSFGYRN-----LRIHKSAICEPLQGENAWSYAEKLKL 500 R + +++ + + + P G + + Sbjct: 803 MHDLRHDDDAARLASELLSGLSEPWRSSEGVEVSVGVSIGICIYPDHGRTPQTLLQGADA 862 Query: 501 AISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILG 560 A+ + + + D E + I +R A+ G+L L YQP VD+ + I+G Sbjct: 863 ALYRAKGDGRGVYRYYADEMTRIARERLHIEARLRRALADGQLLLHYQPQVDLRSGRIIG 922 Query: 561 AEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLL 620 AEAL RW E+G+I P++FI +AE G I E+G ++ A + R + + Sbjct: 923 AEALVRWQDPEQGLIPPVRFIPVAEATGLIGEIGAWVLGEACRQARAWLDAGL--PALTV 980 Query: 621 HINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGV 680 +NVSP Q ++ + ++ E GL L +E+TE + +++LR GV Sbjct: 981 AVNVSPRQFHQADLATQVMQVLVETGLPPTHLELELTEGALMEREAEALQVLQRLRGLGV 1040 Query: 681 RISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVI 738 ++IDDFGTG S+L D +K+D F DI +I I + I V+ Sbjct: 1041 GVAIDDFGTGYSSLASLKRFPIDVLKIDRSFITDIPDDPDDMEIAAAIIAMGHSLGILVL 1100 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 AEGVE+ + L + C + QG+L +P+P A+++ + Sbjct: 1101 AEGVETAEQLAFLQQRNCDRYQGFLRSRPLPAQAFEQLLR 1140 >UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUG6_METML Length = 836 Score = 705 bits (1820), Expect = 0.0, Method: Composition-based stats. Identities = 113/537 (21%), Positives = 222/537 (41%), Gaps = 32/537 (5%) Query: 260 SAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTEL 319 S + N+ F Y +++ + ++ + + E+ Sbjct: 304 SILQVNSAFTTITGYSAEDVVGKNPRILSSGRHDQLFYQAL--WDRVNTTGTWCGEIWNR 361 Query: 320 VNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGF 379 P+ I +K ++G +S+ I+E K + S ++ L YD + Sbjct: 362 RKNGDIYPERI-TISEVKDKDGKVTNYVSVFTDISESKAS----SEQIEHLAFYDPLTNL 416 Query: 380 IKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEK 430 + +++ + A+ + L + + G + +++ +R++ Sbjct: 417 PNRLLLLDRVRQAFSSSSRTGKKGALLFVDLDHFKVLNDTLGHSTGDLLLKLQAERLSHC 476 Query: 431 YAQCCDIVTFNADLYLLLCRE------NVQTFTRKI--AMVNDFDSSFGYRNLRI----H 478 + F D ++++ + +I +++ + + Sbjct: 477 VRAGDTVARFGGDEFVVVLEDLDRNATEAAAIAEQIGNKILSTLHEPCQFGTHQYQSTSS 536 Query: 479 KSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAM 538 ++ +++ + + F D A ++ + +R+A+ Sbjct: 537 IGITLFSGDEHEIEDLLKQADISMYQAKKAGRNTLRFFDPAMQEKLSVRASLESELRYAI 596 Query: 539 EIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQII 598 E +L L YQ VD + + ++GAEAL RW+ ERG +SP++FI IAE+ I ++G+ +I Sbjct: 597 EKQQLALYYQVQVD-DNQRMVGAEALIRWIHPERGTVSPIEFIPIAEESALILDVGHWVI 655 Query: 599 KTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITE 658 TA + +++ K ++ +NVS Q F + + + + A+ L +E+TE Sbjct: 656 NTACMQLAEWAKS-VEKKHLMIAVNVSAHQFRALDFVQSTQQAIDLHKIDASRLKLELTE 714 Query: 659 TVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT 718 +VI + + L+ GV++S+DDFGTG S+L ++ D +K+D F D+ Sbjct: 715 SVILEDVDDVIAKMHALKALGVKLSLDDFGTGYSSLSYLKKLPLDQVKIDQSFVRDLAYD 774 Query: 719 AG-KI-VRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 I V+ I DLA RI VIAEGVE+E L GC QGYL+ +P+P Sbjct: 775 PNDAIMVKTIIDLANNFRINVIAEGVETELELDILKGYGCRLYQGYLFGRPVPIEQL 831 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 705 bits (1820), Expect = 0.0, Method: Composition-based stats. Identities = 120/594 (20%), Positives = 229/594 (38%), Gaps = 36/594 (6%) Query: 198 LNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIE 257 ++ + + + + E + + R ++ + +I Sbjct: 206 VDMEVHSRLFELNGRKAVIGVVMDISERLLADTNLRLAAKVFENSAEGILILDAGARI-- 263 Query: 258 KTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMT 317 + N F Y L + ++F EM Sbjct: 264 ----IAVNDAFTRITGYAEEEALGKASRIFSAEQQAR-----AAMQQALADCGHWQGEML 314 Query: 318 ELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQES 377 + + P + I AL+ +G +++ + I + K+AE +L L ++D + Sbjct: 315 DRRKGGQWYP-AELSISALRDEDGLLSNYVAVFSDITQRKEAE----ERLQFLANHDPLT 369 Query: 378 GFIKNMAIIESNN---------NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIA 428 + S + + LAV I L + + FG ++++ ++ R++ Sbjct: 370 RLPNRSRLTASLDEALTRMDGEDGRLAVMFIDLDRFKLINDSFGHQVGDQLLCEIAIRLS 429 Query: 429 EKYAQCCDIVTFNADLYLLLCR--ENVQTFTR-KIAMVNDFDSSFGYRNLRI----HKSA 481 + + D + LL ++ ++ + Sbjct: 430 RVVGERGMLARLGGDEFTLLMSGFDSHHQLADMASDILAALGKPLCLEAHEVFITGSIGI 489 Query: 482 ICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIG 541 P G +A + + +A+ ++ + + F D + E + + +R A+E Sbjct: 490 SVFPHDGRDARTLLKNADVAMYRAKEAGKNTYQFFDIGMNTQTFERLLLENGLRMALERH 549 Query: 542 ELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTA 601 E L YQP + RA+ GAEAL RW + G++ P +FI +AE+ G I +G +++ A Sbjct: 550 EFELHYQPQLSAGERALAGAEALLRWRHPQLGLVPPARFIALAEETGLIKPIGDWVLREA 609 Query: 602 MGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVI 661 + + + L +N+SP Q +P + ++ GL A L +EITE++I Sbjct: 610 CRQLAAWDAQGLRVP--RLAVNLSPRQFGQPSLPAKVAGALQAAGLAAGRLELEITESMI 667 Query: 662 ERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA-- 719 + + +L+ GV +SIDDFGTG S+L D++K+D F + Sbjct: 668 MQSPTEAVSLLSELKSLGVWLSIDDFGTGYSSLSHLKRFPLDTLKIDQSFVEGLPDDDDN 727 Query: 720 GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 I I +A+ + V+AEGVESE+ A L GC QGY + +P+P + Sbjct: 728 AAIAEAILAMAKKLKFQVVAEGVESEEQAAFLEGKGCHVLQGYHFGRPLPAGEF 781 >UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q478F7_DECAR Length = 739 Score = 704 bits (1818), Expect = 0.0, Method: Composition-based stats. Identities = 115/539 (21%), Positives = 203/539 (37%), Gaps = 37/539 (6%) Query: 261 AVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELV 320 + N F Y + + L + E+ Sbjct: 188 ILRVNQAFTKLTGYSAEEAIGQTP--GMLKSGRQDADFYAAMWCSLGQCGHWQGEIWNRR 245 Query: 321 NTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI 380 P+ I ++ G +S + I+ +K AE E + L YD + Sbjct: 246 KNGEIFPEWL-TISGVRDGRGKVTHYVSTFSDISNLKVAESE----IHHLAFYDPLTAMP 300 Query: 381 KNMAII---------ESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKY 431 ++ + Q+ A+ II + + + G D + ++ ++ +R++ Sbjct: 301 NRRLLLNRLDQACVSAKRSGQFGALLIIDIDHFKTLNDTLGHDVGDHLLVEVARRLSACI 360 Query: 432 AQCCDIVTFNADLYLLLCRE----------NVQTFTRKIAMVNDFDSSFGYRN-----LR 476 + D ++++ E + KI + + + Sbjct: 361 REGDTAARQGGDEFVVMLEELGSEQEGAAVQAEIVAEKIRL--ELARPYLLNGDTEYFRS 418 Query: 477 IHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRH 536 Q + ++ +A+ +D + F D A ++E + +R Sbjct: 419 ASIGISLFFGQEKTIDILLKQADIALYKAKDAGRNAIRFFDTAMQTTLDERAELEAGLRR 478 Query: 537 AMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQ 596 A+ E L QP VD R ++GAEAL RW R +++P FI +AE+ G I +G Sbjct: 479 ALVRDEFVLYVQPQVDAV-RRLIGAEALLRWQPPGRAMVAPNDFIPLAEETGLIVPIGIW 537 Query: 597 IIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEI 656 ++ A E R ++ L +NVS Q + F + + +G L +E+ Sbjct: 538 VLDQACAELRRWADD-PRSASLFLSVNVSARQFRQADFVAQVADALARHGANPRLLKLEL 596 Query: 657 TETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD-- 714 TE+++ E ++ LR GVR S+DDFGTG ++L + +KVD F D Sbjct: 597 TESLLLDNVEEVIEKMQALRTIGVRFSLDDFGTGYASLSYLKRFPFEQLKVDRSFIRDIN 656 Query: 715 IFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 I IVR I + R+ V+AEGVE + L+K C QGYL+ +PM F + Sbjct: 657 INPDDAAIVRAIIAMGNTLRLSVVAEGVEDDLQHAYLVKHECSLFQGYLFGRPMSFDDF 715 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 703 bits (1816), Expect = 0.0, Method: Composition-based stats. Identities = 105/473 (22%), Positives = 207/473 (43%), Gaps = 24/473 (5%) Query: 320 VNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGF 379 V+ F ++I L+ + I +AE K E +L ++D + Sbjct: 163 VHAAGFGAFDAEEIGLLEELANNLAHGILSLRIMAEHKRYE----EQLAYQATHDPLTAL 218 Query: 380 IKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEK 430 + + + +++AV + L + V G + +++++ + +R++E+ Sbjct: 219 PNRNLLADRISQALAWAQRHRRWIAVLFVDLDFFKFVNDSLGHGKGDQLLKMVAERLSER 278 Query: 431 YAQCCDIVTFNADLYLLLCRE--NVQTFTRKIAMV-NDFDSSFGYRNLRI----HKSAIC 483 Q + D ++++ + + R + ++ F + Sbjct: 279 VRQVDTLAHQGGDKFVVVLTDLRGNEEADRAVHVIREAISLPFLMDGQELVISCSIGITV 338 Query: 484 EPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGEL 543 P GE+A + + ++A+ ++ + F + + + + +++R A+E E Sbjct: 339 YPKDGEDAQTLVKNAEVAMYRAKEQGRNCFRYYTRELNERVASRMSMEKHLRKALENEEF 398 Query: 544 FLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMG 603 L YQP D+NT + G E L RW +AE G++ P FI +AE+ G I ++G +++TA Sbjct: 399 ELWYQPQADLNTGRLSGMEGLIRWRNAELGMVQPGSFIPLAEETGLIVQIGEWVVRTACL 458 Query: 604 EFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIER 663 + R + + +N+SP Q + +++E GL L +EI E+++ Sbjct: 459 QNRRWQDAGL--SPLTVAVNLSPRQFRDRELTGVIAGVLRETGLDPRYLGLEIVESMVMH 516 Query: 664 INEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GK 721 E + +L+ GV++S+DDFGTG S+L +K+D F DI Sbjct: 517 DVESAAAMLNELKALGVKLSMDDFGTGYSSLSYLKRFPFAKLKIDLSFVRDIMTDPGSAA 576 Query: 722 IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 I + I +A + V+AEGVE+E L GC + QGY +P+P + ++ Sbjct: 577 IAKSIISMAHNLNLSVVAEGVETEGQLEFLRAHGCNEIQGYYLSRPLPAAEFE 629 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 703 bits (1816), Expect = 0.0, Method: Composition-based stats. Identities = 117/532 (21%), Positives = 208/532 (39%), Gaps = 25/532 (4%) Query: 261 AVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELV 320 + N FE Y G +L + + + R E+ Sbjct: 559 ILRVNPAFEAITGYAAGEVLGLTPDFRCVSSPGGTS--ISQRWELAEQTGRWQGEIVCRR 616 Query: 321 NTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI 380 + + + + ++ G I + I+ +K AE +D +G Sbjct: 617 RSGEHYYEWS-ALSVVRHANGSVLYFIGQFSDISAVKAAEARALRLAC----FDPLTGLP 671 Query: 381 KNMAIIES------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQC 434 + + AV L + + G + +++++ +R+ + Sbjct: 672 NRSLLFDRLQEVLNREPHNGAVLFCDLDRFKNINDSLGHTLGDAVLKEVARRLVARVRPG 731 Query: 435 CDIVTFNADLYLLLCRENVQTFTR---KIAMVNDFDSSFGYRNLRI----HKSAICEPLQ 487 + + D ++L+ ++ D S L + P Sbjct: 732 DTVCRYGGDEFVLVLPGLSDCVVLEQLAEQLLADVSSPILLDGLDLRVTPSLGVAVFPRD 791 Query: 488 GENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVY 547 G + + A+ + + + F + + E + I +R A+E GE L Y Sbjct: 792 GNDCDALLRHADAALYHAKSRGRNTYRFFTREIDDRVSEYLHIEHGLRSALERGEFELHY 851 Query: 548 QPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRH 607 QP VD+ ++G EAL RW E+G+ISP++F+ IAE+ G I +G +I+ A + Sbjct: 852 QPQVDMAFGRVVGVEALLRWKHPEQGMISPVRFVPIAEETGLIVPIGMWVIREACRQAML 911 Query: 608 FSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEH 667 + + + +N+S Q + E + ++GL L VE+TE+VI + Sbjct: 912 WRRAGL--RPMTMAVNLSGRQFSRS-VIEAIDEALADSGLDPRWLQVEVTESVIMEDTQE 968 Query: 668 FYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRI 725 Y +E LR +G+ +++DDFGTG S+L D +K+D F DI IV Sbjct: 969 AYTVLEALRARGLTVAVDDFGTGYSSLAYLKRFPIDKLKIDRSFIRDIDLDEDNPVIVDA 1028 Query: 726 IFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 I +A RI V+AEGVE+ L + GC + QGYL +P P +A + Sbjct: 1029 IIGMAHNLRIKVLAEGVETRAQWDYLRQQGCDEVQGYLVSRPQPAAALGQWM 1080 >UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TX60_9PROT Length = 961 Score = 703 bits (1815), Expect = 0.0, Method: Composition-based stats. Identities = 103/495 (20%), Positives = 201/495 (40%), Gaps = 26/495 (5%) Query: 300 VVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDA 359 + + L + + +G ++ + I E K+A Sbjct: 468 AQVWLRAAAAGQPQQFDWHARRLDGSLFWVEVSMRLARFSDGQ-NRLLVVVRDITERKNA 526 Query: 360 EIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAV 410 + ++L + +D + + + + + +A+ + L + V Sbjct: 527 Q----DRLEFMAHHDPLTELPNRLLLQDRVDRAIALAEREGRRVALMFLDLDQFKTVNDS 582 Query: 411 FGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC---RENVQTFTRKIAMVNDFD 467 G +++++ + R+ + + I D ++++ R+ + Sbjct: 583 LGHAAGDRLLKDVAWRLRQCVRESDTIARLGGDEFVIVLNAVRDADGVVEVAEKIHKSVA 642 Query: 468 SSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNE 523 + P G + + +K A+ ++ S + F + Sbjct: 643 PPITIEGQEVTSTLSMGIAMFPEDGHDFDTLMKKADAAMYHAKESGRSTYRFFAARMNAD 702 Query: 524 IEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITI 583 ++ + + A+E GE L +QP V + A++GAEAL RW ERG++SP +FI + Sbjct: 703 AVAHLALRSGLHRALERGEFQLYFQPQVSLTGGAVVGAEALIRWNHPERGLVSPAEFIPV 762 Query: 584 AEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMK 643 AED G I +G +++ A + + + +N+S Q ++ Sbjct: 763 AEDSGLIVPMGDWVLRQACRQAALWQAGG---HALTMAVNLSALQFRRGDLERAVREALE 819 Query: 644 ENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPD 703 E+GL +SL +E+TE+++ + +E +L GV++SIDDFGTG S++ D Sbjct: 820 ESGLAPHSLELELTESIMIQDHEAVMDMTRRLGALGVQLSIDDFGTGYSSMAYLKRFAVD 879 Query: 704 SIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQG 761 +K+D F D+ I + I +A ++ VIAEGVE +V L GC AQG Sbjct: 880 KLKIDQSFVRDVHTDTDNAAITQAIIQMAHSLKLEVIAEGVEVTEVVEFLRDHGCDLAQG 939 Query: 762 YLYQKPMPFSAWDKS 776 +LY +PM ++K+ Sbjct: 940 FLYGRPMTAQRFEKT 954 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 703 bits (1815), Expect = 0.0, Method: Composition-based stats. Identities = 124/567 (21%), Positives = 233/567 (41%), Gaps = 38/567 (6%) Query: 231 LAREKLIIYNSEGNYNIIDSVDTEYI----EKTSAVPNNALFEIYFYYPGGNLLNASDKL 286 L + + E N +++ + + + + N + + L Sbjct: 307 LESLQQGRRSEERNRLVVERTNQAILLLEPGAGTIIDANPATCVLLGFSRNELTG----- 361 Query: 287 FYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEI 346 A I +L R E EL + + A ++ GD + + Sbjct: 362 -----ADIHALLSGPVQEVDSELERCLRETRELSLCHRDGAELVVEAMATQVPHGDDQAL 416 Query: 347 ISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVG 397 + + I + + + +LL ++D +G + + Q +A+ Sbjct: 417 CLMFHDITDRRRFQ----EELLHQATHDTLTGLPNRSLLEDRLNQAVAGARRRGQMVALL 472 Query: 398 IIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENV---Q 454 + L + V G ++++R + RI C D ++++ Sbjct: 473 MFDLDNFKVVNDTLGHTAGDQLLRSVAARIRSFVRNCDTFARLGGDEFVIVLTNLTRMDD 532 Query: 455 TFTRKIAMVNDFDSSFGYRNLRIHK----SAICEPLQGENAWSYAEKLKLAISSIRDHMF 510 T + N F I P G+ + +K A+ I++ Sbjct: 533 AVTVAESFRNLLAMPFFLGGREIFITASMGISLFPDDGDTMEALIKKADTAMYHIKESGR 592 Query: 511 SEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSA 570 + F F + ++ + I +R A+E GE+ L YQP ++ T A++G EAL RW S Sbjct: 593 NSFQFFAEEMNQKVNARLTIETGLRRALEKGEMLLHYQPRLEPGTGAVVGMEALVRWNSP 652 Query: 571 ERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLN 630 + G+ISP FI IAED G I E+G ++ TA + + + D + +N+S Q Sbjct: 653 DMGLISPADFIPIAEDSGLIVEIGDWVLATACCQALEWHRMG--HDSLRVSVNISARQFV 710 Query: 631 EPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTG 690 F +R I++++GL + + +E+TET + + + +LR++G+ ISIDDFGTG Sbjct: 711 GHDFVDRVVRIIEQSGLSPHFVELELTETALTHNVDETVKIMNRLRERGITISIDDFGTG 770 Query: 691 LSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVA 748 S+L D +K+D F D+ IV I +A + + V+AEGVE+ + Sbjct: 771 YSSLNYLKRFPVDVLKIDKSFIDDMVKRREDAAIVATIIGIAHHMHMKVVAEGVETAEQM 830 Query: 749 RELIKLGCVQAQGYLYQKPMPFSAWDK 775 + L++ C + QG+ + +P+P +++ Sbjct: 831 KLLMEGNCEEIQGFYFSRPLPPEEFER 857 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 703 bits (1815), Expect = 0.0, Method: Composition-based stats. Identities = 125/602 (20%), Positives = 229/602 (38%), Gaps = 34/602 (5%) Query: 196 VDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEY 255 D + + + + + + E + + R +I D Sbjct: 462 ADFSLTQFSPEGGGSTRGGIICYARDITERQKREERMRLSSRFLEDTNEAVVITDADARI 521 Query: 256 IEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSE 315 IE N FE Y + + ++ L T E Sbjct: 522 IE------VNRAFEKLTGYSRQEAIGQNPRI--LQSGHYDADFYREMWDTLLTTGHWEGE 573 Query: 316 MTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQ 375 + P I A+ + G + I N + K + KL L YDQ Sbjct: 574 LWSRRKNNELHPKWL-SISAVYDQRGRITHYVGISNDLTATKQTQ----EKLEELTHYDQ 628 Query: 376 ESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQR 426 + + + +A+ I L + V G + ++ ++ QR Sbjct: 629 LTSLPNILLFRDRLQQAMARARREEHKVALLIFDLDRFKEVNDSLGHSVGDLVLTEVAQR 688 Query: 427 IAEKYAQCCDIVTFNADLYLLLC---RENVQTFTRKIAMVNDFDSSFGYRNLRI----HK 479 + ++ + I D + LL + ++ F F + ++ Sbjct: 689 LRQQLSLADTICRPGGDEFYLLLGRLTDIDTAVQAAQNVLELFSKPFQAADHQLYLTPSI 748 Query: 480 SAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAME 539 P GE S + ++ A+ + + F F + + + +R A+E Sbjct: 749 GITLFPDDGEEVESLIQSVETAMYHAKKDGGNSFQFFQETMFTAALGRMTMKNRLRRAVE 808 Query: 540 IGELFLVYQPIVDINTRAILGAEALCRWVSAERG-IISPLKFITIAEDIGFINELGYQII 598 + E L YQP + + R ++GAEAL RWV ERG +SP +FI +AE+ G I +G ++ Sbjct: 809 LEEFELYYQPKIAADGRTVVGAEALIRWVQPERGGPVSPAEFIPLAEETGLIIPIGEWVL 868 Query: 599 KTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITE 658 + A + + Q + +N+S Q +P + I++E GL A L +EITE Sbjct: 869 RQACRQSLLWQQAGL--PPLRIAVNLSAVQFKQPGLDDEINWILQEIGLPAELLELEITE 926 Query: 659 TVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT 718 +++ + +L+ G+ +++DDFGTG S+L D++K+D +F D+ Sbjct: 927 SLLMEDVTTANATLWKLKDMGIHLALDDFGTGYSSLSYLKNFPLDTLKIDREFVRDLSTD 986 Query: 719 AG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKS 776 ++ I LA ++ V+AEGVE D L + GC QGY + +P+P +++ Sbjct: 987 DEDRAVIITIITLAHSLKMEVVAEGVEDADQVAFLRQRGCDVFQGYHFSRPLPAKEFEQF 1046 Query: 777 GK 778 + Sbjct: 1047 LR 1048 >UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2Z8_DESAC Length = 1288 Score = 702 bits (1814), Expect = 0.0, Method: Composition-based stats. Identities = 142/730 (19%), Positives = 283/730 (38%), Gaps = 41/730 (5%) Query: 80 EIQRAVILKMEMMPFLDSVGL-VLDDNKYYLFSRRANDKIVVYHQEQVNGP---LVDESG 135 + + ++ K + + V +L+D + + +++ VY +G ++ E Sbjct: 571 AVNQHIVHKPQPIELFQFVCDTLLEDTTFAMAWIGLPNEMGVYKPVVSSGISLEVLGEPQ 630 Query: 136 RVIFADFNPSKRPWSVASDDSNNSWNPA-YNCFDR-PGKKCISFTLHINGKDHDLLAVDK 193 I + + ++ ++ + P Y + R P + SF + LL V Sbjct: 631 HCIHNNGQLNHLTTNITAESAQEVLCPTGYRLYQRSPFQAVASFPIQPKQAAGALLVVYT 690 Query: 194 IHVDL-NWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVD 252 L + LD++ +V F HE + + ++L + + + + V Sbjct: 691 QDKKLLEQDDEQQLLDELV--QDVAFALDVHEHEQQQAFSMKQLQLAATVFDNSREGIVL 748 Query: 253 TEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQ 312 T+ EK V N F Y +L + ++ + + + Sbjct: 749 TDKNEK--IVSVNRAFSDITGYRDDEVLGQTPRILKSNRHGRDFYQNMWHCLAE--HGCW 804 Query: 313 FSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLIS 372 E+ P+ + A+ + + I++ I++ K+++ KL L Sbjct: 805 QGEIWNRRKDGQVYPE-LMSMSAVCDDQQEVSHYIAVFTDISQAKESQ----EKLDYLSW 859 Query: 373 YDQESGFIKNMAI---------IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKL 423 +D + + AV L + V FG + ++RK+ Sbjct: 860 HDPLTDLPNRSLFCTHLDQAVKHAERKHHSFAVLCFDLDHFKDVNDSFGHLVGDALLRKI 919 Query: 424 CQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTR---KIAMVNDFDSSFGYRN------ 474 R+ + + D ++LL + + +++ Sbjct: 920 ADRLRSCLRESDMLARLGGDEFVLLLEDVADSHRVTMMAEEILHQLQQPICLTETDLEVQ 979 Query: 475 LRIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNI 534 + + P G +A ++ A+ + H + F + ++ + +E + ++ ++ Sbjct: 980 VSVSVGIAVYPEHGRDALELLQRADSALYRAKQHGRARFAYYNEEMTEQAQERVQLSFHL 1039 Query: 535 RHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELG 594 R A+E E + YQP VD+ T I+GAEAL RW S E G+++P +FI +AE+IG I +G Sbjct: 1040 RQALEKKEFAVYYQPQVDLGTGQIVGAEALMRWNSPELGLVTPDRFIPLAEEIGCICSMG 1099 Query: 595 YQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCV 654 I++ + + + L +N+S Q E R ++E G A L + Sbjct: 1100 TWILRQVCEQGKAWLDAGY--PPLTLAVNLSAVQFAEEDIACRLKETLQETGYPAEYLEL 1157 Query: 655 EITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD 714 E+TE+ + + ++ L + GVR+++DDFGTG S+L +KVD F D Sbjct: 1158 EVTESTLMHKEQQTIDLLKSLNELGVRLALDDFGTGYSSLAYLKYFPLHLLKVDKSFIDD 1217 Query: 715 IFGTAGK--IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 + A +V I + ++AEGVE+ L +LGC QGY P+P Sbjct: 1218 LPADANDCKMVTAIVQMGHGLGFDLLAEGVETVAQRDCLAQLGCDYYQGYYCSPPVPACE 1277 Query: 773 WDKSGKLVKE 782 + + + ++ Sbjct: 1278 FA-ALRQSQK 1286 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 702 bits (1814), Expect = 0.0, Method: Composition-based stats. Identities = 121/500 (24%), Positives = 215/500 (43%), Gaps = 27/500 (5%) Query: 299 LVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQ-IEALKIREGDAKEIISIKNSIAEMK 357 + Y + R+ + +NT T+ I + EG+ +++ I + + K Sbjct: 214 IFAYAIQHAFSTRKEYMVECRINTQRNDVIWTESKINPIMDEEGNVTKLLLITRDVTDRK 273 Query: 358 DAEIERSNKLLSLISYDQESGFIKNMA---------IIESNNNQYLAVGIIKLCGLEAVE 408 +E + L +D + + LAV + L + V Sbjct: 274 QSE----ETIHHLAYHDALTDLPNRRMYVQQLSKEMMQAKRFQSSLAVLFLDLDRFKDVN 329 Query: 409 AVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL---CRENVQTFTRKIAMVND 465 FG D + ++ + +R+ + D + ++ + + ++ Sbjct: 330 DSFGHDVGDMLLIEASKRLQACLKPGDVVARLGGDEFTIMQNQLLDRNEATELAEQIMYQ 389 Query: 466 FDSSFGYRNL----RIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKL 521 F P G+N ++ A+ +++ + + F D + Sbjct: 390 LQRPFELDGHVFNVSCSIGIALYPQDGDNPEDLLKRADTALYTVKSRGKNGYDFFDPSME 449 Query: 522 NEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFI 581 + E I + +R A+E + + YQP +DI T A+ G EAL RWV E GII P +FI Sbjct: 450 AKSLERILMENEMRKAIEQEQFQIYYQPKIDIATSAMTGMEALVRWVHPELGIIPPNRFI 509 Query: 582 TIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTI 641 IAE+ G I LG I+K A + +++ + + +N+S Q+ + E I Sbjct: 510 PIAEETGMILALGEWILKQACKQNKNWHDQGYT---LKVSVNLSARQIYQKDLVEMIKDI 566 Query: 642 MKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEIN 701 ++E L + L +EITE++ + E ++Q+R G++ISIDDFGTG S+ + Sbjct: 567 LQETKLSPHWLELEITESIFVK-MEEATAVLQQIRDIGIQISIDDFGTGYSSFSYIKSLP 625 Query: 702 PDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQA 759 D+IK+D+ F DI + IV+ I +A+ + VIAEG+E D L + GC Sbjct: 626 VDTIKIDASFIRDIHHNQESQAIVKAIVTIAQSLNMNVIAEGIELHDQVAALKENGCDHG 685 Query: 760 QGYLYQKPMPFSAWDKSGKL 779 QGYL+ KP+P +D+ + Sbjct: 686 QGYLFSKPLPTDDFDQLLRQ 705 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 702 bits (1813), Expect = 0.0, Method: Composition-based stats. Identities = 118/542 (21%), Positives = 211/542 (38%), Gaps = 26/542 (4%) Query: 255 YIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFS 314 Y + N E+++ Y G + L L + ++ R Sbjct: 164 YGVDGTVRYWNLASELFYGYSAGEAIG--RNLLDLVIPEGMRAEEKRRMLRMAETGRADP 221 Query: 315 EMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYD 374 + + + A+ R G+A E+ + I+E K E +L L ++D Sbjct: 222 PSEQCLLRRDGSRITVLSCHAVVRRPGEAPELYGLDIDISERKINE----EQLEYLATHD 277 Query: 375 QESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQ 425 + +G + + + +AV ++ L + + G ++++ + Q Sbjct: 278 ELTGLANRALFHDRLEQSLHYAKRSGRIVAVLLLDLDRFKIINDSLGHSFGDRLLSAVAQ 337 Query: 426 RIAEKYAQCCDIVTFNADLYLLLCRENVQTFTR---KIAMVNDFDSSFGYRNLRI----H 478 R+ + D ++LL E + ++++ I Sbjct: 338 RLDRVVRDTDTVARLGGDEFVLLLAEVTEPDDVGLLASRILHELAVPHRIEGREIVMSAS 397 Query: 479 KSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAM 538 P + + +A+ + F F E + I +R A+ Sbjct: 398 LGISLYPKDSGDGSTLIRNADIAMYRAKQEGGGVFSFYAPEMNQRAMETMEIESALRLAL 457 Query: 539 EIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQII 598 E GE L YQP VD+ + I G EAL RW+ RG+++P FI +AE+ G I +G ++ Sbjct: 458 ERGEFTLYYQPKVDLASGRISGCEALIRWLHPRRGVVAPADFIPLAEETGLIVPIGTWVL 517 Query: 599 KTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITE 658 K A + R + + + +N+S Q ++ E GL + L +E+TE Sbjct: 518 KEACRQVRAWQAEGVPIAN--VAVNLSARQFRTGDLPGLVREVLGETGLDPHLLELEMTE 575 Query: 659 TVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT 718 +++ + +E+L GVR+S+DDFGTG S+ + +K+D F I Sbjct: 576 SMVMADHAQVVAVMEELTAIGVRLSLDDFGTGYSSFAHLSHFPINHLKIDRSFIKQIVTD 635 Query: 719 AGK--IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKS 776 I I +A R+ IAEGVE+E L K GC + QGYL +P+P S + Sbjct: 636 PNSATIATSIIAMAHRMRLKAIAEGVETEAQLAYLRKQGCDEIQGYLLSRPLPASEYAAL 695 Query: 777 GK 778 + Sbjct: 696 VR 697 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 702 bits (1813), Expect = 0.0, Method: Composition-based stats. Identities = 122/631 (19%), Positives = 234/631 (37%), Gaps = 39/631 (6%) Query: 176 SFTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIA-------- 227 +F +N D ++ + ++ ++ + + + ++ F ++I Sbjct: 424 AFADLLNEHDREVASTGVPKMNFEVDFVIDGVHRTRVTSKLPFTDGDGQVIGVLGSYTDI 483 Query: 228 ---KNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASD 284 K +L + + N I N F Y ++ Sbjct: 484 TEQKRADLALRLQSRALDASVNAILIT-APSPSGNLIEYVNPAFMRITGYDLDEVIGHDC 542 Query: 285 KLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAK 344 ++ V L+ + R + + A + I + EG Sbjct: 543 RVLQRDDRDQEGVALIREALAA--NREVSAVVRNYRKDGALFWNQLF-IAPVPNAEGVIT 599 Query: 345 EIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLA 395 I + N + E+ + +L +YD + + + ++ +A Sbjct: 600 HHIGVINDVTELIRYQ----EQLEYQANYDGLTRLPNRNLLRDRLEHALVVAQRHHTGVA 655 Query: 396 VGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQT 455 V + L G + V G ++++ + +R+A + D ++++ + V Sbjct: 656 VVFLDLDGFKNVNDSLGHSVGDRLLGVVAERLARCSRTSDTVARHGGDEFVIVMTDTVDE 715 Query: 456 ---FTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDH 508 T + + A P G++A + +K +A+ +D Sbjct: 716 QSLITWMERVRASIAEPVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADVAMYRAKDM 775 Query: 509 MFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWV 568 + F F + + R +R A+ E L YQP VDI + I+G EAL RW Sbjct: 776 GRNTFQFYQPEMNASAGARLNLERRLRRALRDNEFLLHYQPQVDIVSGQIVGIEALVRWH 835 Query: 569 SAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQ 628 E G++ P FI +AE+ G I L +++ A + + + + + +N+S Sbjct: 836 DPEAGLVPPSSFIPLAEESGLIGPLSEWVLREACRQNKAWQDQGL--PPARVSVNLSARV 893 Query: 629 LNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFG 688 + + + ++ E GL+ L +E+TE+ I R E L + +L G+ ++IDDFG Sbjct: 894 FQQRNIAKLVMQVLAETGLEPRYLELELTESTIMRNAEEAVLMLNELHALGIGLAIDDFG 953 Query: 689 TGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESED 746 TG S+L D +K+D F DI G I I LA ++ VIAEGVE+ Sbjct: 954 TGYSSLSYLKRFPVDRLKIDRSFVSDIGVSGDDETITSAIIALAHSLKLQVIAEGVETSA 1013 Query: 747 VARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 L + C + QG+ + KP+ + Sbjct: 1014 QLDFLKERACDEMQGFYFAKPLSTEGISELL 1044 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 121/643 (18%), Positives = 237/643 (36%), Gaps = 43/643 (6%) Query: 148 PWSVASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNWRYLNEYL 207 PW + +S + + + H KD L + V LN + Sbjct: 602 PWELTPIRYQSSETEQLERLKQTRRYG-PYQKHYRHKDGQL-----VAVRLNGSLVT--- 652 Query: 208 DQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNAL 267 + ++ E ++ G I + V N+ Sbjct: 653 AANGEQLILFIVEDITEQERTVARVNLLAQVFQQSGEGITIMDAN------DIIVDVNSA 706 Query: 268 FEIYFYYPGGNLLNASDKLFYLPFAF-IIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFL 326 F Y ++ + + I + L T E+ + Sbjct: 707 FTQITGYSRDEIIGKNCRFLEAERTDRSIDAQVRAALEQTGF---WQGEVWDRHKEGFDF 763 Query: 327 PDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII 386 P + ++ G I I+E K E ++ L +D + +++ Sbjct: 764 PKWLM-MSIVRDETGAISHYIGSFTDISERKVNE----ERIHFLAHHDSLTLLPNRLSLQ 818 Query: 387 ESN---------NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDI 437 + +AV I + + + G + ++ ++ +R+ + Sbjct: 819 SRLEKVFQEAFISQTQIAVMFIDMDHFKNINDTLGHHVGDMLLLEVARRLKNIMGNDDIV 878 Query: 438 VTFNADLYLLLCRE-NVQTFTR-KIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENA 491 D ++++ + + + A+ + + ++ N + P G++ Sbjct: 879 ARLGGDEFVVVLSDTDHDRVAKVAEALRSGLNQTYLIDNKPLHSSPSIGISLFPTDGDSV 938 Query: 492 WSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIV 551 + + +A+ + + + F A + E I +R A+ EL L YQP V Sbjct: 939 EALMKNADMAMYRAKAAGRNNYQFFTAAMNTLVTERQQIETGLRQAIACNELLLYYQPQV 998 Query: 552 DINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQR 611 DI++ ++G EAL RW E G+++P +FI IAE+I I +G +++ A+ + + + Sbjct: 999 DISSGQVVGVEALIRWQHPELGLVAPDRFIPIAEEIDMIIPIGQWVLENALAQLAEWRDK 1058 Query: 612 ASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLN 671 + +N+S QL + ++ ++ L +L +EITE+V + E Sbjct: 1059 G--AKGLRMAVNLSAHQLRKDTIVADIINVLTKHKLGKGALELEITESVAMQYPEQNAKL 1116 Query: 672 IEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDL 729 + +LR+ G+ ++IDDFGTG S+L + D +K+D F DI I + Sbjct: 1117 LAELRQHGIELAIDDFGTGYSSLSYLKLLPLDRLKLDRSFVKDIESDPNDAAISAATISM 1176 Query: 730 ARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 A + V+AEGVE+E L +GC QGY + KP+ Sbjct: 1177 AHELGLTVVAEGVENEAQLVLLSGMGCDLVQGYYFSKPLAADD 1219 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 123/615 (20%), Positives = 222/615 (36%), Gaps = 37/615 (6%) Query: 187 DLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYN 246 L + Y Y +I A + K+ E R+ +E Sbjct: 63 QRLMSGETVPRFEVEYKTRYGHKIIAEGSISLYKENGEPCGIQGFFRDITARKKTEKALQ 122 Query: 247 IIDSVDTEYIEKTSA-----------VPNNALFEIYFYYPGGNLLNASDKLFYLPFAFII 295 + E + A + N+ F + Y LL K+ + I Sbjct: 123 TSEERFRTIYESSVAGIAMLAPDGHFLQANSAFCNFLGYNEEELL--QMKITDVTHPDDI 180 Query: 296 IVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAE 355 L + + + + G+ + + I Sbjct: 181 EDTLSRRNIARANRLHSIVCEKRYIRKDGSVFWAQLSSTWFFDANGNPLYTVPVIQDITR 240 Query: 356 MKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEA 406 K+AE ++ L YD +G + A+ + L + Sbjct: 241 RKEAE----ERIRELAYYDSLTGLANRTLFNDRLDQVMARSRRRQSRFALMFLDLDRFKG 296 Query: 407 VEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFT---RKIAMV 463 V G + ++R+ +R+ E + + D ++++ + + ++ Sbjct: 297 VNDTLGHAVGDAMLRQAAERLNECLRENDTVARLGGDEFVIILSDYKEDANLPRVADKIL 356 Query: 464 NDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDA 519 S F + P G+ A +A+ + ++ F F Sbjct: 357 KALSSPFDLGVREVYSSTSVGIAIYPDDGDEATDLLRHADMAMYAAKESGGDTFRFYSSE 416 Query: 520 KLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLK 579 + + N+R A+E E F+ YQP +D+ T + G EAL RW + G+I P + Sbjct: 417 MNARAVSRMDMEANLRRALEQEEFFIEYQPQIDLITNKVAGVEALLRWQHPQLGVIPPTQ 476 Query: 580 FITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFT 639 FI +AE+ I LG +++ + + Q L F + INVS Q +P F + Sbjct: 477 FIGLAEETNLILPLGEWVMRRVFEQCVMWKQEGYL--PFRVGINVSGRQFVQPDFVDMVC 534 Query: 640 TIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYE 699 ++ E G L EITE+V+ + + L +E L+K G+ ++IDDFGTG S+L Sbjct: 535 RLLDETGAAPELLEFEITESVVMKDVDAAVLTLEALKKLGINMAIDDFGTGYSSLSCLKH 594 Query: 700 INPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCV 757 + + +K+D F D+ IV +A+ + V AEGVE+E + K C Sbjct: 595 LPLNRLKIDKSFISDLQDNADDRAIVEATIAMAKRLELGVTAEGVETEGQYGFVQKRECD 654 Query: 758 QAQGYLYQKPMPFSA 772 + QG+ + +P+ S Sbjct: 655 EVQGFYFSRPLSPSE 669 >UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLV2_DESVM Length = 896 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 116/589 (19%), Positives = 220/589 (37%), Gaps = 34/589 (5%) Query: 207 LDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNA 266 L V+ A+ Q + + N+ I D V N Sbjct: 308 LRGKGMTALVVVHDISGRRTAERQARLFERVFRNALEGICITDPEG-------IIVAVNP 360 Query: 267 LFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFL 326 F YP + + S +L L R E+ Sbjct: 361 AFTTITGYPADDAVGQSPRL--LKSHHHDSAFYEDMWRALVEEGRWEDEIWNRRRNGEVY 418 Query: 327 PDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII 386 P+ I A+ G + +++ + I E+K E ++ +D +G + Sbjct: 419 PEWL-SISAIPGPTGRTEYYVAVFHDITELKAKES----QIQHQAHHDALTGLPNRALLR 473 Query: 387 ES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDI 437 + ++ +AV + L + V G + +++ +++ + + Sbjct: 474 DRLGMAINGARREDRKVAVLSVDLDNFKQVNDSLGHMVGDIYLQQAAEQMRQMVRPQDTL 533 Query: 438 VTFNADLYLLLCRE---NVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGEN 490 D ++++ ++ ++ F + + P G++ Sbjct: 534 ARVGGDEFVVVLQDVEGERDAAQVAERLLARFTDPVRVQEHELFVGASVGIALFPDDGDD 593 Query: 491 AWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPI 550 + +A+S ++ + A + + + ++ A+ G++ YQP Sbjct: 594 PDTLVRNADIAMSRAKEQGKRRYHLFTPAMNDRAVRRLSLEGDLHRALAAGDITAHYQPR 653 Query: 551 VDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQ 610 VD+NT I G EAL RW+ A+ P +FI +AE G I LG +++ A + R Sbjct: 654 VDLNTGLITGMEALARWIRADGSQEHPAEFIPLAESTGLIVPLGEHMLRLACAKTRALCD 713 Query: 611 RASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYL 670 D + +N+S Q + ++ E GL + L +EITE+ I +H Sbjct: 714 AG--HADLHVAVNLSVHQFRHRNLVGMVADVLAETGLPPHLLELEITESTIVTDVDHTIR 771 Query: 671 NIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFD 728 + QL + G+ +S+DDFGTG S+L + + S+K+D F DI I I Sbjct: 772 KLNQLAEMGIALSVDDFGTGYSSLYQLKNLPLTSLKIDRSFIRDIPDDPNDAAIAATIIT 831 Query: 729 LARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 +A + V+AEGVE+ + L+ GC + QG+L+ +P+P + Sbjct: 832 MADRLGLRVVAEGVETPEQLNFLLLEGCHEVQGFLFSRPLPPDEFTALL 880 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 127/593 (21%), Positives = 241/593 (40%), Gaps = 42/593 (7%) Query: 211 SANDEVLFLKQGHEIIAKNQLA----REKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNA 266 +A+ + F+ E I+ + R+ ++++ +I + + N Sbjct: 518 TADRNIAFIISVIEDISSQKENEAILRQSATVFDNTREGIMITDKN------AQIIRVNP 571 Query: 267 LFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFL 326 F F + L + +F + E+ + Sbjct: 572 AFAELFGFSQHELQGKTPVIFKSGKHTH--EFYQHIRDSLNTSAFWRGEIWNRRKDNHII 629 Query: 327 PDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI- 385 P I A++ + +S+ + I+++K +E KL L +D + + Sbjct: 630 PL-ICSISAVRNDKQQLTHYVSVYSDISKLKASEA----KLAHLAHHDPLTQLPNRTLLT 684 Query: 386 --------IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDI 437 + N+ +A+ ++ L + V FG + +++++ +R+ + I Sbjct: 685 INLSHAIDLAVRNHHRIALLMLDLDRFKDVNDSFGHQIGDALLQEVARRLRRRVRISDTI 744 Query: 438 VTFNADLYLLLCR-----ENVQTFTRKIAMVNDFDSSFGY-RNLRI----HKSAICEPLQ 487 D + +L +V+ F ++ F + P Sbjct: 745 CRLGGDEFTVLIEGNPALHDVEHFAE--DILQLLKDPFSLPNGREVIIGASIGISLYPEH 802 Query: 488 GENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVY 547 G+ ++ A+ + H S F + D E+ + + ++ A+ + EL L + Sbjct: 803 GQTPKELLQQADAAMYRAKAHGRSCFRYFSDELTRAAEQRLDLEVRLQRALRLNELCLYF 862 Query: 548 QPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRH 607 QP +DI++ I+GAEAL RW G+ISP +FI +AE+ G I +LG ++ A + + Sbjct: 863 QPQIDISSNRIIGAEALVRWQDPAHGLISPAQFIPVAEETGLIKQLGEWVLLEACRQGKE 922 Query: 608 FSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEH 667 + Q+ L +N+SP Q + E +K+ G A+ L +E+TE+ + Sbjct: 923 WQQKGL--PAINLAVNISPVQFRNSNILESVFNALKQTGYPASLLELELTESALMTHENE 980 Query: 668 FYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRI 725 + LRK G+R++IDDFGTG S+L D +K+D F DI +I Sbjct: 981 AVEILSALRKYGIRLAIDDFGTGYSSLAYLKRFPLDVLKIDKSFVDDIPHKKDDMEIAAA 1040 Query: 726 IFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 I +A R+ V+AEGVE+E+ L + GC QGYL P+P +++ + Sbjct: 1041 IVAMAHTLRLKVLAEGVETEEQLTFLKEQGCDCYQGYLMSPPVPADQFEQLLR 1093 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 129/596 (21%), Positives = 229/596 (38%), Gaps = 32/596 (5%) Query: 202 YLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEY-IEKTS 260 L +Y+ I V F G + A + ++ + EK Sbjct: 317 QLTDYIQGIQKGLRVSFSPTGIYEYNQVGDAMQHMVENLKIAATVFESAEGMVVTDEKKH 376 Query: 261 AVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELV 320 + N F Y ++L + + + + E+ Sbjct: 377 ILRVNQAFTDITGYQPKDVLG--HHIKVIRSGRHNQSFYDELELQLKTQGSWQGEIFNKR 434 Query: 321 NTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI 380 T + E + + I + K AE K+ L YDQ +G Sbjct: 435 KNGEEYLQWTMITAVISDHEDEIINYVITLIDITQRKAAES----KIKQLAFYDQLTGLP 490 Query: 381 KNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKY 431 ++E N QY A+ + L + + G D +K + + QR+ + Sbjct: 491 NRQLLMERLESARLNSQRNGQYGAILYLDLDDFKTLNDTRGHDTGDKFLTLVSQRLLDCV 550 Query: 432 AQCCDIVTFNADLYLLLCRENVQTFTRKIA--------MVNDFDSSFGYRNLR----IHK 479 + + D ++++ + +++ + N+ + Sbjct: 551 RRTDTVARIGGDEFVIILEQLDSDLDIASKRADLLCRKILDTLSKPYYIDNIEHFSTLSI 610 Query: 480 SAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAME 539 + + + LA+ + + F + ++ E+ +A +IRHA+ Sbjct: 611 GVTLFLGETKGIDELLKHADLAMYQAKGAGRNTHRFFNPEMQAKVLEHAAMANDIRHALT 670 Query: 540 IGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIK 599 E L YQP V + + GAEAL RW ++G ISP++FI IAE+ G I LG ++ Sbjct: 671 RNEFTLYYQPQV-THDGQLTGAEALIRWQHPKQGTISPIEFIPIAEETGLILPLGEWVLD 729 Query: 600 TAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITET 659 A + L D +L IN+S Q ++ F ++ ++ + L +E+TE+ Sbjct: 730 QACQVLAVWQNS-PLTDSLVLAINISAKQFHQTGFVQQVLEALQRYRANPDRLKLELTES 788 Query: 660 VIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT- 718 ++ E + QL+K GV S+DDFGTG S+L + D +K+D F D+ Sbjct: 789 MLHEDLEDTITKMSQLKKYGVSFSLDDFGTGYSSLNYLKRLPLDQLKIDKSFVRDLLTNS 848 Query: 719 -AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 I R I LA+ + VIAEGVE+++ L GC+ QGYL+ +P+P A+ Sbjct: 849 HDADIARTIVSLAKSMNLAVIAEGVETQEQRLALASYGCLDFQGYLFSRPVPLEAF 904 >UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WS3_RHOFD Length = 1034 Score = 701 bits (1811), Expect = 0.0, Method: Composition-based stats. Identities = 107/532 (20%), Positives = 208/532 (39%), Gaps = 32/532 (6%) Query: 265 NALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLA 324 N +FE Y ++ + ++ T E + Sbjct: 505 NPMFEQVSGYRRAEVMGQNPRILSSHEKSED--EYREMWATLLAGDIWHGEFHSRRKDGS 562 Query: 325 FLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMA 384 + I + G ++IK I + K AE E + L YD +G Sbjct: 563 LFWEQ-AAIAPIFDDHGRPIHYLAIKEDITKRKAAEAE----IEHLAFYDLLTGLPNRRL 617 Query: 385 IIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCC 435 + + + ++ A+ I L + + G ++ + +++++ QR+ +C Sbjct: 618 LNDRLQQVLAVGTRSRRHGALLFIDLDNFKNLNDTQGHEQGDVLLQQVAQRLNFCVRECD 677 Query: 436 DIVTFNADLYLLLCRENVQTFTRK--------IAMVNDFDSSFGYRNLRI----HKSAIC 483 + D ++++ ++ + T +++ + + + Sbjct: 678 TVARLGGDDFVVMLQDLSEQQTEAATQAEGVGQKILDALHQPYPFGHFTHHGSASVGVAL 737 Query: 484 EPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGEL 543 + ++ LA+ +D + F D I + ++R ++ + Sbjct: 738 FNASQDTVEELLKRADLALYQAKDAGRNTLRFFDPDMQAVISARAEMEADMRLGLQENQF 797 Query: 544 FLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMG 603 L YQP V+ + ++G EAL RW RG+++P FI +AED G I LG +++ A Sbjct: 798 LLYYQPQVN-HAGRLIGVEALVRWQHPLRGLVAPAHFIPLAEDTGLILPLGQWVMEAACR 856 Query: 604 EFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIER 663 + + + +A + +NVS Q + F + G A+ L +E+TE+++ + Sbjct: 857 QLQLWRTQA-HTAQLTIAVNVSALQFHGESFVSDVLATLARTGAPADRLKLELTESLLVK 915 Query: 664 INEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGK 721 + + L+ GV S+DDFGTG S+L + D IK+D F D Sbjct: 916 DVDGVIAKMVALKAHGVGFSLDDFGTGYSSLSYLKRLPLDQIKIDQSFVSDALSNPKDAA 975 Query: 722 IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 +VR + R + VIAEGVE++ L GC+ QGY + +P+P + Sbjct: 976 LVRATVAMGRGLGMMVIAEGVETQMQRDFLEGEGCLNFQGYFFGRPVPVAEL 1027 >UniRef50_A0L8P4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8P4_MAGSM Length = 754 Score = 701 bits (1810), Expect = 0.0, Method: Composition-based stats. Identities = 112/532 (21%), Positives = 216/532 (40%), Gaps = 27/532 (5%) Query: 261 AVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELV 320 + N F + L + + F E+ + Sbjct: 209 ILDINPAFTEITGFSREEALGHNPRSFKSD--RHDATFYTNMWRKIAEEGFWQGEIWDRR 266 Query: 321 NTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI 380 P I A++ + G+ + I I + I+E K E+ KL L YD + Sbjct: 267 KNGEIYPKRL-TINAVRNQAGEVENYIGIFSDISESKATEL----KLERLAYYDALTQLP 321 Query: 381 KNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKY 431 M + + + +AV I L + V G +++++ + QR+ Sbjct: 322 NRMLFHDRLEHEFYNAQRHRKQVAVFFIDLDRFKQVNDTLGHSAGDELLQHVAQRLEGCV 381 Query: 432 AQCCDIVTFNADLYLLLCRE--NVQTFTR-KIAMVNDFDSSFGYRNLRI----HKSAICE 484 + D + ++ + + ++ R ++ + S + I Sbjct: 382 RAADTVARMGGDEFTVILADISDNESVARVARKVLEELQKSISIKGHDIFVGASIGIALY 441 Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELF 544 P G + + + +A+ ++ + F + + + + + HA+ L Sbjct: 442 PDNGNDVETLTKNADMAMYRAKESGRGNYKFFSEEMNVSTSQRLSLESQLHHAVNANLLE 501 Query: 545 LVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGE 604 + YQP +++ + ++G EAL RW A+ +I P++FI +AE+ G I LG +++ AM + Sbjct: 502 VYYQPKLNMQSGIMVGMEALVRWPQADGSMIPPIQFIPVAEETGLIVPLGRLVMRQAMLD 561 Query: 605 FRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERI 664 + + + + + +N+S + P + E GL A VEITE+++ Sbjct: 562 CARWVRETGM--NLRVAVNLSAREFQSPGLVVEIEQTLAECGLDARHFEVEITESLMMHD 619 Query: 665 NEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KI 722 E+ +EQ+ + G+ I++DDFGTG S+L + S+KVD F DI +I Sbjct: 620 VENAIATLEQISRLGIHIAMDDFGTGYSSLSYLKKFPIHSLKVDRSFVKDIPDDPNDIEI 679 Query: 723 VRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 V I LA+ + V+AEGVE+++ L + C + QGY + KP+ + Sbjct: 680 VAAILSLAKVLNLKVVAEGVETQEQLSFLRQNLCDECQGYSFSKPLSAVDFT 731 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 701 bits (1809), Expect = 0.0, Method: Composition-based stats. Identities = 113/536 (21%), Positives = 203/536 (37%), Gaps = 28/536 (5%) Query: 261 AVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELV 320 V N F Y ++ S L + R E Sbjct: 702 IVSVNQAFCATTGYRAEEIIGQSS--LALRSDVHDGIYFRQLWRGIRKRGSWQGEFWCRH 759 Query: 321 NTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI 380 P + + R+G I++ I+ K E ++ + +D + Sbjct: 760 KNGEVSPQWMV-VNTVHDRQGTVTNYIALFTDISAQKSQE----QRIQHIAHHDALTNLP 814 Query: 381 KNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKY 431 + +E N +++AV I L + + G + ++ R++ Sbjct: 815 NRLLCMERLILALQQAHRNGRHVAVIFIDLDHFKNINDSLGHHVGDCVLVTAANRLSMGV 874 Query: 432 AQCCDIVTFNADLYLLLCRENVQTFTR----KIAMVNDFDSSFGYRNLRI----HKSAIC 483 + D ++++ + + K ++ + + Sbjct: 875 RDGDTVSRLGGDEFVIILADIEDSHQIEEIMKHRLLPLMRQPYDAGGYELHCSCSIGISI 934 Query: 484 EPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGEL 543 P G + + A+ ++ + + F + + + + I ++R +E EL Sbjct: 935 FPEDGLDKDTLLRNADTAMYRAKEVGRNNYHFYTEELNSRAMQRLSIETSLRKGIERNEL 994 Query: 544 FLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMG 603 L YQP +D++T G EAL RW + G+ISP++FI IAE+ G I +G Q+I+ A Sbjct: 995 LLHYQPKLDLHTGKPYGLEALLRWQHPDHGMISPMEFIPIAEETGLIIPIGKQVIRNACR 1054 Query: 604 EFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIER 663 + +S L +NVS Q + F E +++E G+ + + +E+TET++ Sbjct: 1055 QLSRWSSVGM--SHICLSLNVSAVQFRDRRFVEDLVQLVREEGVSPHRIELELTETMLME 1112 Query: 664 INEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--K 721 +E L+ +G SIDDFGTG S+L + D +K+D F + Sbjct: 1113 DAVRTIRVMETLKDEGFLFSIDDFGTGYSSLNYLHRFPIDCLKIDRSFIRGMLERPADLA 1172 Query: 722 IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 I++ I L + VIAEGVE ED R L GC QGY +P+ + Sbjct: 1173 IIKAIIGLGHTLDMQVIAEGVEKEDEYRALRAAGCDGIQGYFVARPLTPEQVPEWL 1228 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 701 bits (1809), Expect = 0.0, Method: Composition-based stats. Identities = 116/574 (20%), Positives = 222/574 (38%), Gaps = 33/574 (5%) Query: 223 HEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNA 282 + + + + I + S I ++ + N F Y ++L Sbjct: 418 IQRESSDHRLHQAKIAFESTAEGIFITD------DELRTIAINQGFTDITGYTEDDVLGN 471 Query: 283 SDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGD 342 + R E + + A+ EG Sbjct: 472 IPNVLEADLKKP--EPHREIWKALTREGRWRGEFWNQRKNNEQYAEWV-TLTAVNNEEGK 528 Query: 343 AKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE---------SNNNQY 393 + + I+E+K ++ +L L++ D +G + E Sbjct: 529 VINYVGVFADISEIKHSQS----RLNELVNRDPLTGLPNRRLMHELLDHAIKYAEREQNE 584 Query: 394 LAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLL---LCR 450 +A+ + L +A+ G +K++ ++ QRI + D +++ + R Sbjct: 585 IALLFVDLDRFKAINDTLGHQMGDKLLFEVSQRIRAAVRDSDAVARLGGDEFIVMMDVLR 644 Query: 451 ENVQTFTRKIAMVNDFDSSFGYRNLRIHK----SAICEPLQGENAWSYAEKLKLAISSIR 506 E +++ + F + P + + +A+ ++ Sbjct: 645 EREDAAKVAKKIISSLQNEFLIDGRELFISASVGISVYPDDSLDVDGLIKAADIAMYQVK 704 Query: 507 DHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCR 566 + + F E + +R A+ + + YQ V + T I+GAE+L R Sbjct: 705 NKGKNNHCFYSADLSQNAVERFTLENQLRRALARDQFEVYYQAQVSLETGRIIGAESLIR 764 Query: 567 WVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSP 626 W+ E G++SP KFI +AE+ G I +G +++ + + + + + D + +NVS Sbjct: 765 WIHPELGVVSPAKFIPLAEETGLIIPIGEWVLRQSAMQVKEWHDQGFDID--WVSVNVSG 822 Query: 627 WQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDD 686 Q+ +F + I+ E +++ L +EITE+ + E+ ++++ GVR++IDD Sbjct: 823 VQIQRSNFADTVYGILVETDCESHLLELEITESTVMHNTEYVIDVFDRIKHLGVRLAIDD 882 Query: 687 FGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVES 744 FGTG S+L + D IK+D F D+ I I +A+ VIAEGVE+ Sbjct: 883 FGTGYSSLSHLKRLPLDKIKIDQSFVRDLPNNSDDAAIATAINAMAQSLGFTVIAEGVET 942 Query: 745 EDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 A L K+GC Q QGYLY +P+ S + + Sbjct: 943 RQQASFLKKIGCQQGQGYLYSRPVTASEFTALLR 976 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 701 bits (1809), Expect = 0.0, Method: Composition-based stats. Identities = 129/590 (21%), Positives = 227/590 (38%), Gaps = 38/590 (6%) Query: 202 YLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSA 261 ++ LD+ + E ++ R + S NI VD Y Sbjct: 461 DISFALDRFADERERKIMQDDLRD----SEERYRKAFQTSPDAVNITRLVDGLY------ 510 Query: 262 VPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVN 321 V N FE + ++ + L + LV L + R + V Sbjct: 511 VDVNTGFERITGWRHDEVVGKTATELNLWGNPADRMRLVDALQS---EGRCNNLEATFVK 567 Query: 322 TLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIK 381 + E ++ ++ I+SI I E K AE ++ L +DQ +G Sbjct: 568 KNGDIFHGLMSAEKVRFKD--VDCILSITRDITEKKLAEA----QIQQLAHFDQLTGLPN 621 Query: 382 NMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYA 432 + + + LA+ + L + + G ++++ + +R+ Sbjct: 622 RSQLHDRFRYALSLAQRHGDQLAIMFLDLDHFKNINDTLGHSVGDQLLVDVSRRLKAALR 681 Query: 433 QCCDIVTFNADLYLLLCR--ENVQTFTRKIAMVNDFDSSFGYRNLR----IHKSAICEPL 486 + + D ++LL + Q ++ + P Sbjct: 682 EEDSLSRLGGDEFILLLPGTDEAQASQVATKLLAAVAQPCQIEQNELVSTVSIGIALYPN 741 Query: 487 QGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLV 546 G++ + ++ A+ ++ ++F F + + +RHA+ E L Sbjct: 742 DGQDFETLSKNADAAMYRVKQASRNDFRFFTQEMQTHSARTLQLVNALRHALPRHEFELH 801 Query: 547 YQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFR 606 +QP V + I+GAEAL RW E G+ISP +FI IAED G I +G +++TA+ + + Sbjct: 802 FQPQVALQDGHIVGAEALLRWRHPELGMISPAEFIPIAEDSGQILAIGEWVLRTAVRQLK 861 Query: 607 HFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINE 666 + ++ +N+S Q P+ T I+ E L L +E+TE Sbjct: 862 QWLDAGL--RPMVIAVNLSAVQFRHPNLMALVTRILDEAALPPEFLELELTEAAAMDDPP 919 Query: 667 HFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVR 724 + +L + G+R+SIDDFGTG S+L + + +K+D F DI IV Sbjct: 920 AAIAIMNKLDEHGIRMSIDDFGTGYSSLSYLKKFKVNKLKIDQSFVRDISDDPDDKAIVT 979 Query: 725 IIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 I +LA + IAEGVE+ L GC + QGY KP+P ++ Sbjct: 980 AIINLASSLGMHTIAEGVETASQLAFLRLQGCDEVQGYYVSKPLPKDQFE 1029 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 701 bits (1809), Expect = 0.0, Method: Composition-based stats. Identities = 105/533 (19%), Positives = 203/533 (38%), Gaps = 28/533 (5%) Query: 258 KTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMT 317 K + N +F Y ++ + ++ R E+ Sbjct: 292 KGRILRINPMFTELTGYGEAEVVGGNPRIIRSNH--HDADFYAEIWQAIFRDGRWQGEIW 349 Query: 318 ELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQES 377 + I A+ G + I I E +A+ +L L YD + Sbjct: 350 NRRKDGQVFVAW-ESIVAVYDEAGAIRYFIGSFRDITEQVEAQRH----ILRLAHYDVLT 404 Query: 378 GFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIA 428 + + +++ A+ + L G + V G + +++++ R+ Sbjct: 405 DLPNRVLFQDRLERAVVHALRHDRQAALLFLDLDGFKKVNDTMGHRAGDDLLKEVAVRLR 464 Query: 429 EKYAQCCDIVTFNADLYLLLCRENV---QTFTRKIAMVNDFDSSFGYRNLRI----HKSA 481 I D + ++ E ++ + + Sbjct: 465 GCVRMTDTIARLGGDEFTVILDEISAANDASMVADKILASLHAPIFIDGRDVFIGTSIGI 524 Query: 482 ICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIG 541 P+ G + + A+ + F F E + + +R A+E G Sbjct: 525 SLFPIDGTSGDELLKHADTAMYQAKAAGKGRFNFYSAEMTKREEHRLELETALRQAVEEG 584 Query: 542 ELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTA 601 + + YQP ++ T + G EAL RW G+ISP+ FI +AE++ I+ + +++ A Sbjct: 585 QFQVHYQPQKNLATNRVSGFEALVRWQHPRLGMISPVDFIPLAEEMHLIDRIDMFVMRQA 644 Query: 602 MGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVI 661 + R + + D + +N+S + E+ ++++ G A +L +EITE+ + Sbjct: 645 CRKGRQWRDQGY---DICMAVNLSGVNFSRDDLPEQVRQVLEDTGFPAENLELEITESFV 701 Query: 662 ERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK 721 + +++LR GV+++IDDFGTG S+L + +++K+D F DI + Sbjct: 702 IDLEVDQREVLQRLRALGVKLAIDDFGTGYSSLSYLKRLPVNTLKIDRSFVRDIARDSRD 761 Query: 722 I--VRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 + V I +A + V+AEG+E D L+ C + QGYL KPMP Sbjct: 762 MMLVSSIIGIAHSLGLKVVAEGIEERDQLAILLSQECDEIQGYLIAKPMPAEQ 814 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 700 bits (1808), Expect = 0.0, Method: Composition-based stats. Identities = 130/631 (20%), Positives = 236/631 (37%), Gaps = 47/631 (7%) Query: 163 AYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQG 222 Y+ R G+ + T D V V L + + + Sbjct: 411 KYSNIRRVGEVLDAETFCPALHDGKGAYVWATGVPL--------YNAAGERIGAIEAIRD 462 Query: 223 HEIIAKNQLAREKLI--IYNSEGNYNIIDSVD-TEYIEKTSAVPNNALFEIYFYYPGGNL 279 +++L +KL I NS I D+ EY+ K + Sbjct: 463 ISDRKQSELFLKKLTHGIENSASAVVITDTQGVIEYVNKKFI--------QLTGFSLEEA 514 Query: 280 LNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIR 339 + + ++ + V T R E+ S I L+ Sbjct: 515 VGKNPRILKSEATPP--EVFVDLWKTILSGREWRGELLNRRKNGEVY-WSITSISPLRND 571 Query: 340 EGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NN 390 G+ I+ I E K+AE + L +D + + + + Sbjct: 572 SGEITHFIANVEDINERKNAEAT----IEHLAYFDPLTDLPNRRMLQDRLELALRRSRRH 627 Query: 391 NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR 450 +A+ + L + V G + +++++ R + + D + L+ Sbjct: 628 GSNVALMYLDLDSFKHVNDSMGHPAGDLLLKEMAGRFSGVVRDDDVVCRLGGDEFALILH 687 Query: 451 E---NVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAIS 503 + + ++ + P G + + + +A+ Sbjct: 688 DIHQDQDVVPIAQKLIEAVAQPVPLDGREVVVTASIGIALFPRDGGDVKNLEKHADIALY 747 Query: 504 SIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEA 563 ++ + F F + + I I + + +R+A E EL L YQP V + + + G EA Sbjct: 748 HAKEEGKNTFRFYLEELNSTISTRIALEQGLRYAKERQELELHYQPKVCVASGKVSGVEA 807 Query: 564 LCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHIN 623 L RW S + G++SP++FI +AE I +G +++TA + + ++ L + +N Sbjct: 808 LLRWHSPDFGLVSPIRFIPLAEQTRLIIPIGEWVLRTACLQQVQWREQGLL---LNMAVN 864 Query: 624 VSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRIS 683 +S QL P ER I+ E G++ L +E+TE+ + + +E+LR G IS Sbjct: 865 LSAIQLKSPGLVERVAAIIDETGIQPEHLELELTESALVNNPDEVVQLLERLRTLGCSIS 924 Query: 684 IDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEG 741 IDDFGTG S+L +K+D F D+ I R + DLA + +AEG Sbjct: 925 IDDFGTGYSSLSYLKSFPVTILKIDRSFVRDLAHNSGDRAIARSVVDLANNLDMKTVAEG 984 Query: 742 VESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 VESE+ L ++GC QG++Y +P+ Sbjct: 985 VESEEQLTILQQIGCTYIQGFIYSRPVQADQ 1015 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 700 bits (1807), Expect = 0.0, Method: Composition-based stats. Identities = 138/684 (20%), Positives = 254/684 (37%), Gaps = 60/684 (8%) Query: 121 YHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLH 180 + + + V+ A+ S P + + + + G + T+ Sbjct: 455 WLRRTPQELEGQRASDVLSAELLQSLHPHMLQALQGRPVVFDYRSPYRGAGPEFFHTTII 514 Query: 181 I-NGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLI-I 238 G D ++A+ VD+ + L L Q +A A ++ + Sbjct: 515 PETGPDGRVVAIMVFAVDVTEQ-----------KHLALELSQQRSRLASLVNAIPDVVFL 563 Query: 239 YNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVL 298 ++ G Y N +FE Y +++ D+ P + Sbjct: 564 KDAAGRYLSC----------------NPVFERYLGRRERDIVGLGDEELMTPVEAARVRQ 607 Query: 299 LVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKD 358 L M + E T + ++ G ++S+ I + K Sbjct: 608 LDERAMAAW--QPLVYEETLTFAEDGYAGYFETIKTPIRDMHGHVTGLLSVSRDITDRKK 665 Query: 359 AEIERSNKLLSLISYDQESGFIKNMAIIE---------SNNNQYLAVGIIKLCGLEAVEA 409 AE ++ L +D +G +++ N + A+ I L + + Sbjct: 666 AE----QQIELLAFFDALTGLPNRRLLLDRLQRAGAACQRNEKLGALLFIDLDNFKDLND 721 Query: 410 VFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFT--------RKIA 461 G D ++++ ++ QR+ E + F D ++++ Sbjct: 722 TLGHDMGDRLLVQVAQRLQECVRTSDTVARFGGDEFVVMLEGLDADTALAALQAEQVAEK 781 Query: 462 MVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCD 517 ++ + F + Q ++ LA+ + + F D Sbjct: 782 LLAQLNRPFEMGAQQHYSTPSIGITLFGDQRRTVDELLKRADLAMYQAKAAGRNTQRFFD 841 Query: 518 DAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISP 577 ++ + ++R + EL + QPIVD +T + GAEAL RW +G+ISP Sbjct: 842 PDMQAQVTARSQLESDLRQGIARHELTVHLQPIVDGST-RLCGAEALVRWRHPVKGLISP 900 Query: 578 LKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHER 637 FI +AE+ G I LG Q+++TA + ++ F + +NVS Q +P F Sbjct: 901 ADFIPLAEETGLILPLGRQVLQTACEQLVRWATH-PATASFTIAVNVSARQFRQPDFVAE 959 Query: 638 FTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRF 697 + G L +E+TE+++ E + QL++ GV ++DDFGTG S+L Sbjct: 960 VLGTLAGTGANPQRLKLELTESLLLGDVEDTICRMAQLKRVGVGFALDDFGTGYSSLSYL 1019 Query: 698 YEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLG 755 + D +K+D F D+ IVR I LA+ + V+AEGVE+ L G Sbjct: 1020 KRLPLDLVKIDQSFVRDVLTDPNDAAIVRTILALAKSLDLQVVAEGVETAGQLSFLKLHG 1079 Query: 756 CVQAQGYLYQKPMPFSAWDKSGKL 779 C QGYL+ +P+P A+++ L Sbjct: 1080 CEGFQGYLFGRPVPLEAFEREHDL 1103 >UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V280_9PROT Length = 725 Score = 700 bits (1807), Expect = 0.0, Method: Composition-based stats. Identities = 115/582 (19%), Positives = 221/582 (37%), Gaps = 40/582 (6%) Query: 224 EIIAKNQLAREKLIIYNSEGNYNIIDSVDTE-------YIEKTSAVPNNALFEIYFYYPG 276 ++ N E L +I + E K + N F Y Sbjct: 135 QVSTLNSELDEMLHKQRETEQELLISATAFEAQDGIMITDSKGVILRVNQAFTDITGYSS 194 Query: 277 GNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEAL 336 + + +L L + + E+ + P I + Sbjct: 195 EEAVGQTPRL--LKSGRHDADFYAAMWQCIKNTGQWSGEIWDRRKNGEIYPKWL-TITEV 251 Query: 337 KIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES-------- 388 K +G +S + I K +E +++ +L YD + +++ Sbjct: 252 KSFDGSVVHYVSSQVDITARKASE----DRIHNLAFYDPLTQLPNRRLLLDRLRHSVSFS 307 Query: 389 -NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLL 447 + +++A+ I L + + G D + +++++ +R C + D +++ Sbjct: 308 LRDGRHVALMFIDLDKFKKINDTLGHDIGDLLLKQVAERTLTCVRTCDTVARLGGDEFVV 367 Query: 448 LCRENVQTFTRKI--------AMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYA 495 L +++ + S+ + A Sbjct: 368 LLDGLAGNLHEAAAQAKQIGRKIIDTLNQSYDLAGHEYQSGASIGIALFDEHCQTAEDLL 427 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 ++ +A+ + + F D I + + ++ + A+ + ++ YQP++ Sbjct: 428 KQADIAMYQAKKAGRNTLRFFDPEMQASILARVALEKDFKDALLQEQFYICYQPVIS-RE 486 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 + GAEAL RW + RGI+SP FI +AE+ G I LG ++KTA + +S R Sbjct: 487 GRVAGAEALVRWRHSIRGIVSPADFIPLAEETGLIVPLGNWVLKTACRQLSDWSSRD-DT 545 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 D + +NVS QL + F +++E G L +E+TE+++ E + + L Sbjct: 546 RDLTIAVNVSARQLKQEDFVTTVMGLIEETGANPRRLKLELTESMLVSDAESIIVKMNLL 605 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYN 733 ++ G+ ++DDFGTG S+L + D +KVD F +I I +LA Sbjct: 606 KEAGITFALDDFGTGYSSLAYLSRLPLDQLKVDQSFVRNIETEDSAVVICAATINLAHNL 665 Query: 734 RIPVIAEGVESEDVARELIK-LGCVQAQGYLYQKPMPFSAWD 774 ++ V+AEGVE+E L C QGYL+ KP+ ++ Sbjct: 666 KLKVVAEGVENEAQRYFLSSVHQCDFLQGYLFSKPVAIDEFE 707 >UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9D8_9BURK Length = 897 Score = 699 bits (1805), Expect = 0.0, Method: Composition-based stats. Identities = 141/727 (19%), Positives = 264/727 (36%), Gaps = 49/727 (6%) Query: 79 EEIQRAVILKMEMM--PFLDSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLVDESGR 136 ++I IL+ E + + SV L+ ++ K+ N I Y + G + +G Sbjct: 177 QDIMSEFILRYEAIFTGVMGSVLLMDEEGKHLRHGAAPNLPIE-YCKAIDGGAIGPSAGS 235 Query: 137 VIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKK--CISFTLHINGKD-----HDLL 189 A F + S ++D W AY C S + + Sbjct: 236 CGTAAFTGKEVLVSDIAND--PLWA-AYKELALSHGLRACWSVPIRSTKGKVIGTFANYY 292 Query: 190 AVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIID 249 V +I D + +S + I +++ A E+ +Y +++D Sbjct: 293 GVARIPSDSELQSARRSAYLLSL---AIENDLNDRQIRQDRQAIEEAGLYRQAILDSMVD 349 Query: 250 SVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVF 309 + T + NNA + P +L + +L Sbjct: 350 GLVTLDLNGRIHTFNNAACRMMGRDPEAPRPQTLSELLGTQLPLNV----QGHLDLLSTV 405 Query: 310 RRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLS 369 E+ A + A +I + + I + + E ++ Sbjct: 406 DGIEGASAEVNGRHANGAIRPISVSASRIPHTEHDTFVVTLRDITQQRQDE----EEIRR 461 Query: 370 LISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIV 420 L YD +G +++ Q+ A+ + L + + G D ++++ Sbjct: 462 LAFYDPLTGLPNRRLLMDRVRQAMVNSARLGQHGALMFLDLDHFKLLNDTLGHDVGDELL 521 Query: 421 RKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKI--------AMVNDFDSSFGY 472 +++ R+ + + D +++L T +++ + Sbjct: 522 QQVAYRLRNCVREGDSVARLGGDEFVVLLEGLSDNRTDAANQAEVVAHKILDALALPYSL 581 Query: 473 RNL----RIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENI 528 R + E +K +A+ + + F D + + Sbjct: 582 RGHGYNSTPSIGIVVFMEDHETMDDLLKKADVAMYQAKAAGRNTARFFDPVMQAAVTTHA 641 Query: 529 WIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIG 588 +A+ IR ++ E L YQ +D GAEAL RW RG++SP FI +AE+ G Sbjct: 642 ELAKEIRLGLQRHEFVLHYQVQIDSQ-GRCTGAEALVRWNHRVRGLVSPAHFIPLAEETG 700 Query: 589 FINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLK 648 I LG ++++A + +S R + + L +NVS QL +P F ++ +G Sbjct: 701 MILPLGEWVMESACQQLVEWS-RNPMTAHWTLAVNVSASQLAQPEFVASVREALQRSGAP 759 Query: 649 ANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVD 708 A L +E+TE+++ E + + +++ GV S+DDFGTG S+L + +K+D Sbjct: 760 AGQLKLELTESMLVDDVEDIIVKMMAIKELGVSFSLDDFGTGYSSLSYLKRLPLSQLKID 819 Query: 709 SQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQK 766 F D+ I R + L + VIAEGVE+ + L + C QGY + + Sbjct: 820 QSFVRDVLTDPSDAVIARTVVALGHSLGLTVIAEGVETAEQRDALAAMQCDAFQGYYFGR 879 Query: 767 PMPFSAW 773 P P A Sbjct: 880 PAPADAL 886 >UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=C6NZZ7_9PROT Length = 1152 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 121/597 (20%), Positives = 240/597 (40%), Gaps = 41/597 (6%) Query: 212 ANDEVLFLKQGHEIIAKNQL-AREKLIIYNSEGNYNIIDSVDTEYI-----EKTSAVPNN 265 ++ ++Q + + R + ++ SE + ++ EY+ + +N Sbjct: 555 TESDIQLIEQSARLASIAIERKRSEEALHYSEKRFRDVNDAAGEYVWEMGTDMVYTYVSN 614 Query: 266 ALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAF 325 ++ Y P LL + F + +V + + F + Sbjct: 615 RSVDVKGYVPD-ELLGHTPMEFMPVEDIPHVREIVNRAIASNTS---FKLQHRDITKSGT 670 Query: 326 LPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI 385 L G+ + +I + K AE ++ SL YD + + Sbjct: 671 LLWEEVNGVPFFDEHGELMGLRGTGMNITDRKRAE----EEIKSLAFYDPLTHLPNRRLL 726 Query: 386 IES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCD 436 ++ + + A+ I L + + G D + +++++ R+A + Sbjct: 727 VDRLQHALASSTRSGREGALLFIDLDNFKTLNDTLGHDIGDLLLQQVALRLASCVREGDT 786 Query: 437 IVTFNADLYLLLCRENVQTFTRK--------IAMVNDFDSSFGYRNLRI----HKSAICE 484 + D ++++ E + ++ + + A Sbjct: 787 VARLGGDEFVVMLEELSEQTLEAAAQTESIGEKILLTLNQPYLLAAHEYRNSPSIGATLF 846 Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELF 544 + ++ ++ +A+ + + F D + + R + A+E + Sbjct: 847 GNKPQSIEELLKQADIAMYQAKKAGRNTLRFFDPQMQETVIARALLERELSKALENDQFQ 906 Query: 545 LVYQPIV-DINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMG 603 L YQ + D+ GAEAL RW+ ERG+I P FI +AE++G I +G ++ TA Sbjct: 907 LYYQIQMTDL--NEPFGAEALIRWIHPERGLIPPNHFIPLAEEVGLILPIGLWVLDTACN 964 Query: 604 EFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIER 663 + + + ++ + + +L +NVS + F + T+++ + + L +EITE+++ Sbjct: 965 QIKIW-EKNASTRELVLAVNVSARSFFQDDFVTQIQTVLQRHAINPKRLKLEITESMMLN 1023 Query: 664 INEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGK 721 E + L+K GV+ ++DDFGTG S+L+ + D +K+D F DI Sbjct: 1024 SIEQTIEKMNALKKLGVQFAMDDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIATDSSDKA 1083 Query: 722 IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 IV I +A + VIAEGVE+E + LI+ GC Q QGYL+ KP P +++S K Sbjct: 1084 IVTTIVAMAHSLNLDVIAEGVETEQQRQLLIESGCSQYQGYLFGKPAPIRQFEESLK 1140 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 698 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 122/632 (19%), Positives = 245/632 (38%), Gaps = 35/632 (5%) Query: 160 WNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFL 219 W+ + P ++ I L A+ L +++ D + D V Sbjct: 177 WDHLPDSVVAPMRRGIDRVLDRRETVESHHAIG---AKLFDVHMHLVADSVGQRDRVAIF 233 Query: 220 KQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNL 279 + + ++ R++L + + + T+ V N F + Y + Sbjct: 234 SRD---VTQSHQRRQQLRKLETALEQAPVSVMITDSHGAIEYV--NRAFVLVSGYSEDEV 288 Query: 280 LNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIR 339 L + +L L + L E+ + + I ++ Sbjct: 289 LGRNPRL--LKSGETVASLYRDMWHCLASGATWQGELCNRAKDGSLFWEY-ATISPIRDD 345 Query: 340 EGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NN 390 +G +++K +I + K+ E +L+ ++D +G + + + Sbjct: 346 DGVVTHFMAVKENITQRKETE----QQLVHQATHDTLTGLPNRLLLEDRVHHAIEVAKRE 401 Query: 391 NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR 450 + + + + L + V G +++++ + R+ + + D ++++ Sbjct: 402 GRRIGLMFLDLDRFKIVNDSLGHVAGDELLKVVSDRLRHTLRRSDTVARLGGDEFVVVLT 461 Query: 451 E---NVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAIS 503 + + D ++ P G+N + + A+ Sbjct: 462 HFQSTTELAEVAEKISAALDEPVELSGHKVHVGASIGIAIYPDDGDNFNALMKDADTAMY 521 Query: 504 SIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEA 563 + + F F D +E + + + +R A+ GE L YQP VD+ T G EA Sbjct: 522 RAKQKGRNTFCFYDSNMNDEALDRLKLEEALRRALVRGEFQLFYQPQVDLQTGRTSGVEA 581 Query: 564 LCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHIN 623 L RW S ERG +SP FI +AE+ I+ +G+ +++ + + + + + +N Sbjct: 582 LIRWNSPERGQVSPALFIPVAEESNLISMIGWWVLEESCRQIAAWREAGLTG--IKVAVN 639 Query: 624 VSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRIS 683 VS Q E + +M + + + L +E+TE+ + + + +LR+ G+++S Sbjct: 640 VSGRQFLNHALVECISDLMAQYAVLPSQLEIELTESTVMAEPDRAIEQLTRLREIGIQVS 699 Query: 684 IDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEG 741 +DDFGTG S+L + +IKVD F D+ IV I LA + ++AEG Sbjct: 700 VDDFGTGYSSLSYLKRLPLSTIKVDRSFVRDVNNQSDNAAIVSAILGLADALDMSIVAEG 759 Query: 742 VESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 VE+E + L GC++ QG+ Y KPMP Sbjct: 760 VETEGEEQHLKDAGCIKVQGFRYAKPMPADQL 791 >UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39WZ5_GEOMG Length = 739 Score = 698 bits (1802), Expect = 0.0, Method: Composition-based stats. Identities = 114/480 (23%), Positives = 202/480 (42%), Gaps = 25/480 (5%) Query: 318 ELVNTLAFLPDSTDQIEALKIREGDAKEII-SIKNSIAEMKDAEIERSNKLLSLISYDQE 376 E V T + GD +I SI I E K AE +L L +D Sbjct: 257 EAVFTAKDGRSVIVEGSLSCAHGGDESSVIWSICRDITERKHAE----EQLYRLAHHDTL 312 Query: 377 SGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRI 427 +G + ++ +AV + L + + G + +++++ RI Sbjct: 313 TGLPNRILFMDRLQQAKALANRYRYQVAVLFLDLDRFKIINDTLGHPVGDHLLQQVAHRI 372 Query: 428 AEKYAQCCDIVTFNADLYLLLCR--ENVQTFTR-KIAMVNDFDSSFGYRNLRI----HKS 480 A + + D + ++ + V+ R ++ + F + Sbjct: 373 AGCVREVDTVARIGGDEFTIILVNVDTVEDVKRMGQKILKTLAAPFNIDTHELFVTASIG 432 Query: 481 AICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEI 540 P G+N +K +A+ ++ + F ++ + + ++R A++ Sbjct: 433 ISLFPSDGDNLDQLVKKADIAMYCVKGEGRNNVQFYSPQMDANADKRLLLETSLRKALDN 492 Query: 541 GELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKT 600 E + YQP VDI ++ I EAL RW G++SP +FI +AE+ G I +G +++ Sbjct: 493 REFRVYYQPKVDIVSKRITAMEALIRWDHPILGLVSPGEFIPLAEETGLIIPIGEWVLRA 552 Query: 601 AMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETV 660 A + + ++ + +N+S +Q + + E I+ E GL A+ L +EITE+V Sbjct: 553 ACFQNCEWVRQGI--PPMRVAVNLSGYQFQQKNLLETIRGILDETGLTADLLELEITESV 610 Query: 661 IERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA- 719 I + + + QLR GV ISIDDFG G S+L + +++K+D F D+ + Sbjct: 611 IMQNPDFAVSVLNQLRDLGVHISIDDFGIGYSSLAHLKRFSVNTLKIDKSFVRDVEINSA 670 Query: 720 -GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 I I + + VIAEGVE+E L C + QGYL+ PMP + + Sbjct: 671 DAAIATAIIAMGNSLNLKVIAEGVETEGQLSFLSDNKCDEVQGYLFSTPMPPEKVAEFMR 730 >UniRef50_Q2S7Q5 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7Q5_HAHCH Length = 832 Score = 697 bits (1801), Expect = 0.0, Method: Composition-based stats. Identities = 151/828 (18%), Positives = 300/828 (36%), Gaps = 101/828 (12%) Query: 31 NYQLVSERAVKRADSRFELIQKNVGYFFKDIERSALTLKDSLYLLKNTEEIQRAVILKME 90 L ++ + + + + +++R + +L L+ + I++ + E Sbjct: 24 GLLLYHRQSENFLEQVNDQLVGQLNVAQANLQRRIDVAQGNLRLISKSNLIRQYFMTDDE 83 Query: 91 MMPFLDSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLVDESGRVIFADFNPSKRPWS 150 + +++LF R + ++ Q P + RV+ A+ P Sbjct: 84 -------------EQRFFLFYRPV---LELFRSYQEIFPEYID-MRVLDANGKPQTSLPQ 126 Query: 151 VASDDSNNSWNPAYNCFD----RPGKKCI-------------------SFTLHINGKDHD 187 A D+ ++ A+ D K C+ +FT + D Sbjct: 127 PAYKDNADAITQAWINTDKGQPEKEKTCVIRAVSGAPLLLVGASISLSTFTDWRTIDESD 186 Query: 188 LLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHE--------IIAKNQLAREKLIIY 239 I L+ + Y I + V+ + + ++ E L Sbjct: 187 RAGSLVIASRLDDIAKSIYAAHIGKHGHVMLVDAAGNPYFHESEEHSSSHREVFEHLPPP 246 Query: 240 NSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLP----FAFII 295 + +I Y+ T I +P L + FYL + ++ Sbjct: 247 SENREAIVIGEPGNYYL--TLQREVLPDLRIVGVWPMSEL---KENAFYLANQAAWLTLV 301 Query: 296 IVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAK-----EIISIK 350 ++L+ L+ + V + ++ + L +S + R+ + EI + Sbjct: 302 LILVTSALIFSVVHGQLIKPISRVTQLAHLLGESHAETPPEAARDFQSTLRRRDEIGELA 361 Query: 351 NSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI---------IESNNNQYLAVGIIKL 401 + M ++KL + +D +G + ++ L + I + Sbjct: 362 RAFKSMDGNLRATASKLTFIAYHDSLTGLANRHTFGAFLHRAIAEAARHHFRLGLLYIDI 421 Query: 402 CGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIV---------------TFNADLYL 446 G + V G + + +++++ QR+ + D + Sbjct: 422 DGFKDVNDSLGHEAGDLVLKEISQRLHNVLRAEDMVADMSAQYEAMEATKMSRIGGDEFA 481 Query: 447 LL---CRENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLK 499 ++ + +++ + F + P G++A + Sbjct: 482 IVVNHLHSPMDISHIVKRLLDAMQAPFQIESHSFLLGASVGIAVYPEDGKDAHELLKCAD 541 Query: 500 LAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAIL 559 +A+ + + F + D + E I +IR A++ G+ L YQP V ++ Sbjct: 542 IAMYHSKRQGRNGFEYFDTKMNHMAVERHQIISDIRSALQKGQFELYYQPQVSALAGNVM 601 Query: 560 GAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFL 619 G EAL RW ERG +SP++FI IAE+ G I E+G +++ A + R + + D+ Sbjct: 602 GCEALLRWRHPERGFVSPVEFIPIAEETGQIIEIGRWVLEEACRQCREWQAQGL--DEIR 659 Query: 620 LHINVSPWQLNEP-HFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQ 678 + +N+S Q + + +GL + L +EITET + + ++ + L+ Sbjct: 660 MSVNISAVQFSSSTDIVAVTREALAHSGLPPDCLDLEITETAMMQSDKVGVDKLNALKNL 719 Query: 679 GVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIP 736 GV IS+DDFGTG S+L ++ D +K+D F I + I++ I LA+ I Sbjct: 720 GVSISMDDFGTGYSSLASLRDLPIDQLKIDKSFVDKINHDSQGRAIIKAILALAKELSIE 779 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFS---AWDKSGKLVK 781 V+AEGVE L C QGY KP+P + + V+ Sbjct: 780 VVAEGVEERTQLDFLSLHRCDLIQGYYVAKPLPADGMRDFLRQHTQVE 827 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 697 bits (1799), Expect = 0.0, Method: Composition-based stats. Identities = 106/490 (21%), Positives = 198/490 (40%), Gaps = 40/490 (8%) Query: 319 LVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESG 378 + ++ + +G+A + I E K AE ++ L YD +G Sbjct: 218 RITLGGGERTLHAELVTVLDEQGEAVCLTGTIQDITERKRAE----EQIRLLAYYDALTG 273 Query: 379 FIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAE 429 ++ ++ LAV + L + V G +++++ + R+ Sbjct: 274 LPNRRFFLQQLEQALVFANRYDRMLAVLFLDLDRFKLVNDTLGHGVGDRLLQDVADRLLR 333 Query: 430 KYAQCCDIVT------------FNADLYLLLCRE-----NVQTFTRKIAMVNDFDSSFGY 472 + + D + ++ + +V R+I + + Sbjct: 334 CVRRGDCLARADEECPPSLVSRLGGDEFTIMLSDIEHFQDVAKIARRI--LEAVSVPYSL 391 Query: 473 RNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENI 528 + P A A+ ++ + + D++ + E I Sbjct: 392 EGQEVFVSTSIGISLYPFDATTASDLIRNADGAMYQAKEQGRNGYQIYDESMNAKALERI 451 Query: 529 WIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIG 588 + + A++ E + YQP V + ++G EAL RW S E G++ P +F+ +AE+IG Sbjct: 452 ILESQLHKALKEEEFIVYYQPQVSNQSGRVVGIEALVRWNSKELGLVEPGRFLPLAEEIG 511 Query: 589 FINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLK 648 + ++ +++ A + + + L IN+S Q + E T+++KE+GL Sbjct: 512 LVIQIDQWVMREACRQHKLWLDAGF--PPVTLAINISGQQFMKNELLETVTSVLKESGLD 569 Query: 649 ANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVD 708 L +E+TE V+ E ++ L+ GVR++IDDFGTG S+L D +K+D Sbjct: 570 PGLLELELTEGVLMAHTERTVKTLQALKGMGVRLAIDDFGTGFSSLSYLKRFPLDVLKID 629 Query: 709 SQFTGDIFG--TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQK 766 F DI I ++A ++ VIAEGVE++ L K GC QGYL+ K Sbjct: 630 RTFINDITTDPDDAAITLATIEMAHTMKLKVIAEGVETKPQLDFLTKNGCDMYQGYLFSK 689 Query: 767 PMPFSAWDKS 776 P+P + + Sbjct: 690 PVPSTELPRL 699 >UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74BV5_GEOSL Length = 660 Score = 697 bits (1799), Expect = 0.0, Method: Composition-based stats. Identities = 99/471 (21%), Positives = 181/471 (38%), Gaps = 39/471 (8%) Query: 339 REGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------N 389 +G ++ + I E AE ++ L +D + E Sbjct: 193 DDGRTSRLVGTVHDITERTLAE----ERIRYLAHHDTLTALPNRFQFEERMEQALAFAQR 248 Query: 390 NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCD------------I 437 N +AV + L + V G ++++++ R+ + + I Sbjct: 249 NGFMMAVLFLDLDHFKKVNDTLGHHAGDRLLQEAAGRLMKCLRRSDTLTHASREDASPFI 308 Query: 438 VTFNADLYLLLCRENV---QTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGEN 490 D + +L + ++ + + P GE+ Sbjct: 309 SRMGGDEFTILLTDLAHPQDAARVSQRIITALSKRYVIGGHEVFVGASIGISLFPSDGED 368 Query: 491 AWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPI 550 A+ ++ + + + + E + + N+R A++ E L YQP Sbjct: 369 CDQLLRNADTAMYHAKELGRNTYQYYSGSMNAMALERLTLENNLRWALKRNEFRLCYQPQ 428 Query: 551 VDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQ 610 +D + ++G EAL W ++ P FI +AE+ G I +G ++ A + + Sbjct: 429 LDAASGRVVGMEALLSWHRPGCDVVPPDDFIPLAEETGLIASIGEWVLWNACAQAVTWLH 488 Query: 611 RASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYL 670 + +N+S Q E +++ GL + L +EITE V E + Sbjct: 489 EGL--PPVRVAVNLSSLQFRSRRLAELVRKVLRATGLPPSHLELEITEGVFMSNEEDAAV 546 Query: 671 NIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFD 728 I L+K GVR S+DDFGTG S+L R D++K+D F DI + I Sbjct: 547 VIRDLKKMGVRFSVDDFGTGYSSLSRLSRFPLDALKIDRSFVRDISADPAAAGLTAAIIA 606 Query: 729 LARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM---PFSAWDKS 776 +AR + VIAEGVE+ + L GC + QG+L+ +P+ +A+ ++ Sbjct: 607 MARNLGLNVIAEGVETHEQFAFLRANGCAEVQGFLFSQPLNPDAAAAFLRA 657 >UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0D5_PELCD Length = 1141 Score = 697 bits (1799), Expect = 0.0, Method: Composition-based stats. Identities = 132/651 (20%), Positives = 240/651 (36%), Gaps = 36/651 (5%) Query: 149 WSVASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNWRYLNEYLD 208 W A + + C S+T + H+ +D + W Sbjct: 480 WPSAPITEVSDLSRY--CQQAAQALATSYTELEKQRRHNTDTLDNLLAKHRWESFTSS-R 536 Query: 209 QISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDS-VDTEYIEKTSAVPNNAL 267 Q+ L ++ + Q + + S I +S V + N Sbjct: 537 QLEKTARQLAKEKHQRLRV--QELIDNIDAAESRYQLLIENSLVGIFVYQHHRYTYVNPR 594 Query: 268 FEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLP 327 F F Y +++++ + + + V + V + Sbjct: 595 FAEIFGYTPEEIVDSAPQPQLVHPDDQLFVDANNLKILGGVNANHLRYEFVGLRKTGQPI 654 Query: 328 DSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE 387 D I I EG +I I E K+AE + L +D +G + ++ Sbjct: 655 DVEILI-GRGISEGQPA-LIGSLLDITERKEAEKT----IEHLAFHDPLTGLANRLLFMD 708 Query: 388 S---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIV 438 +++ A+ + L + + G + ++++ QR+ + + Sbjct: 709 RIEQAIAHAHRHHESFALMFLDLDRFKTINDSLGHSAGDAALKEVAQRLTTCLRETDTVS 768 Query: 439 TFNADLYLLLC-----RENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGE 489 F D + +L E ++ KI + + + + P G Sbjct: 769 RFGGDEFNVLLSGPSHEEEIELIAHKI--LKSLAWPYDINDHEVFMTCSIGIASYPKDGR 826 Query: 490 NAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQP 549 A + + A+ +D + F F + E + + ++R E EL + YQP Sbjct: 827 EAITLVKNADTALYRAKDLGRNNFQFYSSSMNARALERMAMESSLRRMFERQELRVHYQP 886 Query: 550 IVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFS 609 V + + I G E L RW +I+P F+ +AE+ G I +G +++ + + + Sbjct: 887 QVGLQSGRITGLEGLVRWEHPVGNMIAPSVFVPLAEETGLIVPMGEWVLQAGCYQLKTWL 946 Query: 610 QRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFY 669 L INVS QL + F E ++KE L + L +EITETVI + Sbjct: 947 DAGF--APMRLGINVSAHQLQKSDFAELVMQVLKECDLPPHYLNLEITETVIMHNMNEAF 1004 Query: 670 LNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIF 727 + +LR G+ ISIDDFGTG S+L ++ D +K+D F ++ I R I Sbjct: 1005 ETLRRLRAVGITISIDDFGTGFSSLSYLKDLPADHLKIDRAFVQNLPFGNNEANIARHII 1064 Query: 728 DLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 ++A + VIAEGVE++ L + GC + QG+L +P+ + Sbjct: 1065 EMAHGLNLKVIAEGVENQAQLDFLREAGCDEIQGFLVSRPLAAEDITEILT 1115 >UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K569_AZOSB Length = 947 Score = 697 bits (1799), Expect = 0.0, Method: Composition-based stats. Identities = 130/585 (22%), Positives = 227/585 (38%), Gaps = 38/585 (6%) Query: 218 FLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYF--YYP 275 ++ + AKN+ + ++ ++ D +I SA A + P Sbjct: 371 IAQRNAALEAKNRELQLAARVFECGNEAMMVLDADHRFITVNSACAQLAGLDAAALRGRP 430 Query: 276 GGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEA 335 LLN D + A + RR+ + A Sbjct: 431 AAQLLNDHDGAGWERIARELAEQ--GAWSGEVTVRREDGPTLPAQ----------LSVSA 478 Query: 336 LKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES------- 388 + G A + ++ K E L + YD + + + Sbjct: 479 VLNSAGGATHYVGALTDMSAHKQTEAL----LRHMAEYDALTDLPNRSLLHDRARAAIQG 534 Query: 389 --NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYL 446 ++ A+ I L + V G + ++R+ +R+A I D ++ Sbjct: 535 AARTDRLAALLFIDLDRFKNVNDSLGHSVGDALLRQAAKRLASLLHGGDTIARPGGDEFV 594 Query: 447 LLC---RENVQTFTRKIAMVNDFDSSFGYRNLRIH----KSAICEPLQGENAWSYAEKLK 499 +L + R +++ F + F + + P G +A + Sbjct: 595 MLLAEITDRAVAANRAAQIIDAFSTPFRVEHYELSVTPSIGIAIAPDDGVDADTLLRNAD 654 Query: 500 LAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAIL 559 A+ ++ + + F D + E + + +R AM E + YQP ++ IL Sbjct: 655 AAMYHAKESGRNTYRFFTDEMSLRVRERLELENLLRQAMSRDEFEVFYQPQFGLSDHRIL 714 Query: 560 GAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFL 619 G EAL RW ERG+I+P +FI +AED G I +G ++++TA + + D Sbjct: 715 GCEALVRWRHPERGLIAPERFIPLAEDTGLIVAIGRRVLETACHTAQGWRAAGLG--DIP 772 Query: 620 LHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQG 679 + +N SP Q++ +F E ++ E GL A L +E+TE+ + + L+ G Sbjct: 773 VAVNASPVQIHHGNFAETVAEVLAETGLPARLLEIELTESTLMADAAPVAATLAALQDMG 832 Query: 680 VRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIPV 737 VR++IDDFGTG S+L D +K+D F D+ G I I +AR + V Sbjct: 833 VRLAIDDFGTGYSSLAYLKRFQLDKLKIDRSFINDLPGDPDDANITVAIIGIARSLGMSV 892 Query: 738 IAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE 782 IAEGVE+ R L+ GC + QGYL+ P+P + ++ Sbjct: 893 IAEGVETAAQERFLVDQGCAEGQGYLFSPPVPVESMTALLATARD 937 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 697 bits (1799), Expect = 0.0, Method: Composition-based stats. Identities = 123/623 (19%), Positives = 228/623 (36%), Gaps = 52/623 (8%) Query: 178 TLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVL---FLKQGHEIIAKNQLARE 234 T + D ++ V L+ N I ++ ++ I A A+E Sbjct: 412 TEWLPFTDGRAHLLEMTRVRLH-DSANNVTGLIGLAADITERQKVESELRIAAAAFEAQE 470 Query: 235 KLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFI 294 ++I + + N F Y +L + +L Sbjct: 471 GMLITDRHNVIMRV----------------NQAFTSITGYLAEEVLGKNP--CFLASGRH 512 Query: 295 IIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIA 354 + E+ P+ I A+K + + ++ I Sbjct: 513 DAGFYQSMWEGLNEKGKWEGEVWNRRKDGEIYPEYLL-ISAVKDIKNEVANYVATFRDIT 571 Query: 355 EMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLE 405 K AE E + L YD + + + N A+ I L + Sbjct: 572 ANKAAESE----IKKLAFYDPLTLLPNRRLLTDRLNHALASSARNRNIGALLFIDLDNFK 627 Query: 406 AVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRK------ 459 + G D + +++++ R+ + + D ++++ + Sbjct: 628 TLNDTLGHDMGDALLKQVALRLKSCIREDDTLARLGGDEFVVILENLSELAMDAATKAEL 687 Query: 460 --IAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEF 513 ++ + + + + ++ +A+ + + Sbjct: 688 IGEKILAALNQVYPLASQEYHGAASIGVTLFAGHALSIDELMKQADIAMYQSKKSGRNTL 747 Query: 514 IFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERG 573 F D I E + +R A++ +L L YQ ++ L AEAL RWV RG Sbjct: 748 RFFDLDTQKIINERAELEIELRKAVDKKQLHLHYQIQLNSV-GTPLSAEALIRWVHPVRG 806 Query: 574 IISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPH 633 +ISP FI +AED G I +G ++ TA + + D L +NVS Q ++ + Sbjct: 807 LISPAHFIPLAEDTGLILPIGQWVLDTACAQLHSWQDERFT-QDLTLAVNVSAKQFHQKN 865 Query: 634 FHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSN 693 F ++ + + L +E+TE+++ E + + LR+ G++ S+DDFGTG S+ Sbjct: 866 FVALVKETVQRHAINPKLLKLELTESMLVENIEDIIVTMNALREMGIQFSLDDFGTGYSS 925 Query: 694 LKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVAREL 751 L+ + + +K+D F ++ + IVR I +A + VIAEGVE+E+ L Sbjct: 926 LQYLKRLPLNQLKIDQSFVRELSSSSSDRAIVRTIVAMAESLNLNVIAEGVETEEQHTLL 985 Query: 752 IKLGCVQAQGYLYQKPMPFSAWD 774 +GC QGYL+ KPMP D Sbjct: 986 QDIGCNYYQGYLFGKPMPIEQLD 1008 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 697 bits (1799), Expect = 0.0, Method: Composition-based stats. Identities = 112/578 (19%), Positives = 230/578 (39%), Gaps = 36/578 (6%) Query: 224 EIIAKNQLAREKLIIYNS----EGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNL 279 +++ + ++E+L++ + + +I + V N FE + Y + Sbjct: 413 RDVSERRNSQEQLMLLETGIARLNDIVVIVEASPHHGSGPQIVFVNDAFERHTGYTRDEV 472 Query: 280 LNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIR 339 L+ + P + + + +Q + +I ++ + Sbjct: 473 LSRMPGMLQGPGTRQDE---LARIFSALQQWKQARGELVIYRKDGGSFWVDLEIVSVAAQ 529 Query: 340 EGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNN-------- 391 GD +++ I + K A K+ L YD + +++ Sbjct: 530 NGDLTHWVAVGRDITQRKAA----DEKIHHLAFYDPLTELPNRQLLLDRLEQALADCTIT 585 Query: 392 -QYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC- 449 Q + I L + + G + + +++K+ R+ + + D ++++ Sbjct: 586 RQEGVLMFIDLDNFKILNDTVGHSKGDLLLQKVAVRLKGCVRKLDTVARLGGDEFVVMLQ 645 Query: 450 -----RENVQTFTR--KIAMVNDFDSSFGYRNLRIHKSAICE--PLQGE--NAWSYAEKL 498 E + ++ + + + ++ P + ++ Sbjct: 646 DLGTQPEAATRKAQIVAEKVLATLREPYDLAGYQHYSTSSIGVTPFNARQGSVSELLKQA 705 Query: 499 KLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAI 558 LA+ + + F D + N ++ ++R + + + YQP VD + I Sbjct: 706 DLAMYQAKTMGRNTVCFFDPDMQASVSANAALSTDLRAGLREHQFLVHYQPQVD-REQRI 764 Query: 559 LGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDF 618 G EAL RW +RG++SP +FI +AE+ G I LG +++ A + + +R Sbjct: 765 TGVEALLRWKHPQRGMVSPAEFIPVAEETGLILPLGQWVLEQACLQLAVWQKR-PETAGL 823 Query: 619 LLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQ 678 + +NVS Q P F + +K G++ ++L +E+TE+++ E + L+ Sbjct: 824 SIAVNVSVRQFRHPDFVDMVMAAIKHTGIQPHNLKLELTESLLADRMEIAIAKMGTLKAL 883 Query: 679 GVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIP 736 GV +++DDFG G S+L + D +K+D F D+F I I LA+ + Sbjct: 884 GVTLALDDFGMGYSSLSYLKRLPLDQLKIDKSFIADVFSDPNDAAICSAIISLAQSLGLD 943 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 VIAEGVE+E L LGC QG+L+ P+P + ++ Sbjct: 944 VIAEGVETEAQRSFLAGLGCGYYQGFLFCPPLPIAEFE 981 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 96/477 (20%), Positives = 195/477 (40%), Gaps = 24/477 (5%) Query: 319 LVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESG 378 LV + + R+G +++ + ++ + E+ K+ L +D + Sbjct: 286 LVRRDGSELPIDESRAPILDRQGQIAGTVTVLHDVSVTRAMEL----KMAHLAQHDFLTD 341 Query: 379 FIKNMAI---------IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAE 429 + + + LAV + + + + G +K ++ + +R+ Sbjct: 342 LPNRRVLDDRLRQAISLARRQGKQLAVLFVDIDRFKHINDSLGHGMGDKALQSMAERLTT 401 Query: 430 KYAQCCDIVTFNADLYLLLCRENV---QTFTRKIAMVNDFDSSFGYRNLRI----HKSAI 482 + D +++L E +++ + Sbjct: 402 CVRASDTVARQGGDEFVILLAEVTTADDAAIVAKKILSAVALPHRIGRHELQISASIGIS 461 Query: 483 CEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGE 542 P ++A + + +A+ ++ + + F + + + ++R A+E E Sbjct: 462 TCPNDADDAETLIKHADIAMYQAKEKGRNNYQFFRADMNERVLQRQSLESSLRLALERQE 521 Query: 543 LFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAM 602 L YQP +++ T I G EAL RW E G++ P FI +AED G + +G +++ A Sbjct: 522 FLLHYQPKMNLETGHITGMEALIRWRHPELGLVPPASFIGVAEDCGLMQPIGRWVLQEAC 581 Query: 603 GEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIE 662 + + + + + +NVS + HF + + ++E L L +E+TETV+ Sbjct: 582 RQVKEWMVAGL--NPVPVAVNVSAVEFRRKHFFDGVISTLRETDLDPRYLELELTETVLM 639 Query: 663 RINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAG 720 + E + L+ GV+++IDDFGTG S+L + D++K+D F D+ Sbjct: 640 KEAEPTIAVLHALKSAGVKLAIDDFGTGYSSLSYLTRLPVDTLKIDRSFVTDVTTRTDNA 699 Query: 721 KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 IV I + + + VIAEGVE+++ L C + QGY + +P+ A + Sbjct: 700 AIVSAIIGMGKSLNLNVIAEGVETQEQLALLRSHCCAEGQGYYFSRPVSVPAVAELL 756 >UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5Q6_AZOSB Length = 828 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 129/594 (21%), Positives = 236/594 (39%), Gaps = 34/594 (5%) Query: 207 LDQISANDEVLFLKQGH-EIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNN 265 D + ++ + + E A + R+ ++++ I D N Sbjct: 230 FDSVGQRKGIVVVGRDITERRAAEERLRQAATVFDNTVEGISITDRDG------IIQSVN 283 Query: 266 ALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAF 325 F Y ++ ++ L T + E+ T Sbjct: 284 PAFSRITGYAEAEVIGCHTRI--LQSGRHGADYYRAMWRTLARTGQWQGEIWNRRKTGEV 341 Query: 326 LPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI 385 P I ++ EG+ +++ + I+++KDA+ +L L YD +G + Sbjct: 342 YPQWL-TIGTVRDDEGEVSNYVAVFSDISQIKDAQS----QLERLAHYDPLTGLPNRALL 396 Query: 386 ---------IESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCD 436 +AV + L G + V G +++++ + +R+ Sbjct: 397 GDRLAHAISRARRAGTSVAVLFLDLDGFKNVNDSLGHPAGDRLLQIIAERLCGALRSEGS 456 Query: 437 IVTFNADLYLLLCRENVQTFTR---KIAMVNDFDSSFGYRNL----RIHKSAICEPLQGE 489 + F D + ++ + V+ ++ + P G+ Sbjct: 457 VSRFGGDEFAVVLEDVVRGEAVSEVAEHLIAEIARPLDLDGHGAHVSASIGIALFPRDGD 516 Query: 490 NAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQP 549 +A + + A+ + + F F + + + +R A+E G L YQP Sbjct: 517 DATTLIKAADTAMYRSKALGRNTFSFHHEDMAQAAHRRLSLEHGLRQALEQGRFELWYQP 576 Query: 550 IVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFS 609 +D+ T + GAEAL RW ERG++SP +F+ +AE+ G I +G +++ A R + Sbjct: 577 QIDLRTGVLAGAEALLRWRDPERGLVSPAEFVPLAEETGLILPIGLWVLEEACRAGRAWL 636 Query: 610 QRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFY 669 + +NV+ Q+ F + ++ +GL +L VEITE + R E+ Sbjct: 637 DVGL--APGRIAVNVAAPQIERGGFDQAVARVLSASGLPPAALEVEITEGSLLRSAENAR 694 Query: 670 LNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIF 727 L + LR GV ++IDDFGTG S+L + ++K+D +F D+ AG I R I Sbjct: 695 LAVAALRALGVGVAIDDFGTGYSSLAYLKNLAVQTLKIDREFVRDLPHDAGNLAITRAII 754 Query: 728 DLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVK 781 + R V+AEGVE A L+ GC AQGYL+ KPMP + + + + + Sbjct: 755 AMCRSLGFGVVAEGVEEPAQAAFLVSEGCTLAQGYLFAKPMPGAEFAEWLRTYR 808 >UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SC6_GEOMG Length = 821 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 107/491 (21%), Positives = 205/491 (41%), Gaps = 25/491 (5%) Query: 306 TRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSN 365 R S E + + +G A + I + I + K AE Sbjct: 325 AMTTGRAVSREVERILDDGEPSGLRLSAFPVFNEQGKATKFIKVVEDITDRKRAE----E 380 Query: 366 KLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDER 416 K+ L YD +G +++ + + +A+ + L + V G Sbjct: 381 KIRRLAYYDSLTGLPNRPLMMDRLSQAIRHARRHGEVVALLFLDLDRFKDVNDSQGHRVG 440 Query: 417 NKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTR---KIAMVNDFDSSFGYR 473 +++++++ R++ + + D ++++ ++ F Sbjct: 441 DRLLQEVAARLSGCTRESDTLARLGGDEFVIIAPGVRAATDASLLADKILAALAEPFTLD 500 Query: 474 NLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIW 529 + + P G N ++ +A+ + +D + + F E Sbjct: 501 RQTLHIATSIGIVLFPSDGGNGEMLLQRADMAMYAAKDRGGNSYRFFSAEMNTRAVERHE 560 Query: 530 IARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGF 589 + ++R A+ GE FL+YQP V+ T ++G EAL RW +G+I P +FI +AE+ GF Sbjct: 561 LEEDMRQALTNGEFFLMYQPQVNTGTWKVVGVEALVRWNHPRKGVILPSRFIPVAEETGF 620 Query: 590 INELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKA 649 I++LG +++ A + + + +N+ Q + ++++ GL + Sbjct: 621 ISKLGRWVLEEACRQGAQWQHDGL--PPLQMGVNLCARQFTHEEIVGTVSDVLQKTGLPS 678 Query: 650 NSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDS 709 L +E+TET++ +E + QL+ GVR++IDDFGTG S+ D IK+D Sbjct: 679 ELLEIELTETMLM-DSETAVSTLGQLKALGVRLAIDDFGTGYSSFNYLKHFPLDRIKIDQ 737 Query: 710 QFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKP 767 F DI + G I+ I +AR V+AEGVE+E+ R L+ + C QG+ + +P Sbjct: 738 SFIRDIGQSRGNGAIIEAIVAVARSLGPEVLAEGVETEEQLRYLMSITCADIQGFYFSRP 797 Query: 768 MPFSAWDKSGK 778 + + + Sbjct: 798 LLPDDVSRLIR 808 >UniRef50_A1ALB3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Desulfuromonadales RepID=A1ALB3_PELPD Length = 705 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 121/533 (22%), Positives = 223/533 (41%), Gaps = 25/533 (4%) Query: 264 NNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTL 323 ++ L+ I+ + PG + + ++ L + L + + + + Sbjct: 175 SDELYRIFGFTPGEPKRISKEWIYSLIHPADLPAFKQQLLTSVKTLQSFNMIYHTTSRSG 234 Query: 324 AFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNM 383 L Q E + +G A I I AE E + LI+YD +G Sbjct: 235 GELV-VNIQGEVERGEDGRAWLISGTVLDITARIKAESE----IHHLINYDTLTGLPNRS 289 Query: 384 AIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQC 434 + + + + V + L + V G +K+++++ +R+A + Sbjct: 290 LLHDRLRQAIAQAAQDRHMVWVLCLDLDRFKGVNDTLGHRSGDKLLQEVARRLAACVRES 349 Query: 435 CDIVTFNADLYLLLCRENVQTFTRKI---AMVNDFDSSFGYRNLRI----HKSAICEPLQ 487 + D ++++ V I ++ + + P+ Sbjct: 350 DTLARLGGDEFVVVLDGVVSEKGASIVAKKILTLIAEPIPIDDHELYTTASIGIAAYPMD 409 Query: 488 GENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVY 547 GE+ + + LA+ ++ + F F ++ E + + ++R A+E E FLVY Sbjct: 410 GEDGHTLLKHADLAMYKAKELDRNNFHFFSHDMNIKVMERMMLENSMRKALERDEFFLVY 469 Query: 548 QPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRH 607 QP VD + I G EAL RW + G+++P +FI +AE+ GFI LG ++ TA + R Sbjct: 470 QPQVDARSGRITGVEALLRWNHPDMGLLTPDRFIYLAEETGFIVPLGEWVLMTACRQNRA 529 Query: 608 FSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEH 667 + + + +N+S Q + E + I+ E GL+ L +EITE+ I R + Sbjct: 530 WQKLGF--PPLRVAVNLSGKQFGQHRLDEMISAILLETGLEPEWLELEITESAIMRNADQ 587 Query: 668 FYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRI 725 + L+++G+ ++IDDFGTG S+L +K+D F DI I I Sbjct: 588 NIAILRSLKEKGISLAIDDFGTGYSSLSYLKHFPITRLKIDKTFVQDITTNPDDAAIAEI 647 Query: 726 IFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 I +A+ ++ VIAEGVE+ L C + QGYL+ +P+ + + Sbjct: 648 IIAMAQTLKLNVIAEGVETRAQMEFLSTHTCFEMQGYLFSRPLTTDKFVYLLR 700 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 696 bits (1797), Expect = 0.0, Method: Composition-based stats. Identities = 127/533 (23%), Positives = 228/533 (42%), Gaps = 27/533 (5%) Query: 265 NALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLA 324 NA E F Y ++ +S ++ + + + RR T Sbjct: 180 NAGAEGLFGYRASEVIGSSVEILI---PPDLREEEGDIMCLIKSGRRADHFETVRWGKGR 236 Query: 325 FLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMA 384 D + I A+K R G+ I I + K+++ ++ L YD +G Sbjct: 237 KPIDVSVTISAMKDRAGNIIGASKIVRDITQRKESQ----ERIEYLAHYDSLTGLPNRTL 292 Query: 385 IIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCC 435 + + + LA+ + + + V G + +K+++ + QR+ Q Sbjct: 293 LSDRLRIAIENARRYSIRLALLFVDIDRFKLVNDSLGHEIGDKLLKAVAQRMQSTVRQAD 352 Query: 436 DIVTFNADLYLLLCR--ENVQTFTR-KIAMVNDFDSSFGYRNLRI----HKSAICEPLQG 488 + D +++L E R ++ + + P G Sbjct: 353 TVSRVGGDEFVVLLSRIETATDAARSAEKLITSISQPYQIEEHELLLTASIGISIYPDNG 412 Query: 489 ENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQ 548 ++A S A+ S + + + F + E + + ++R A+ E+F +YQ Sbjct: 413 KDASSLTRNADAAMYSAKGQGRNRYQFYSEDLTYAAAERLRLEHDLRGALSRDEIFPLYQ 472 Query: 549 PIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHF 608 P +++ T ++G EAL RW A +G+ISP FI +AED G I LG I++ A + R + Sbjct: 473 PQIELATGRVIGVEALMRWNRAGQGLISPASFIPVAEDSGLILALGEYILRKACLQARQW 532 Query: 609 SQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHF 668 + + + +NVS Q + F + ++ E G L +E+TE+V+ + E Sbjct: 533 HEHQGFQG--TIAVNVSAVQFRQNDFTDVVLRVLSETGFPPECLELEVTESVVMQGLESV 590 Query: 669 YLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRII 726 + L G++++IDDFGTG S+L + D +K+D F D+ G A I+R I Sbjct: 591 VQKMGILESHGIKLAIDDFGTGYSSLSYLRQFAIDRLKIDQSFVRDLPGDADAQAIIRAI 650 Query: 727 FDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKL 779 + R + V+AEGVE+E AR L + C ++QGYLY +PM + ++ K Sbjct: 651 VAMGRSLGLRVMAEGVETEAQARFLQDIECTESQGYLYARPMKSNDFEAWLKT 703 >UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9S8_MAGSM Length = 971 Score = 696 bits (1796), Expect = 0.0, Method: Composition-based stats. Identities = 116/574 (20%), Positives = 226/574 (39%), Gaps = 33/574 (5%) Query: 218 FLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGG 277 L E R +++ + +I S D + N F Y Sbjct: 395 VLHDITERRKGEHDLRLAQVLFRTTNEALMISSRDNKIEM------VNPAFSRITGYQLD 448 Query: 278 NLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALK 337 +L L L + E+ + P+ I + Sbjct: 449 EVLGKGPDL--LQSGRHDAPFYTQMWHALQQDGAWEGEIWNRRKSGETYPEWL-SIATVT 505 Query: 338 IREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--------- 388 +G+ + ++ + I + K AE +L +YD + + Sbjct: 506 NDKGETVQYVAAFSDITKRKQAE----ETILHQANYDFLTDLPNRNLFHDRLQTELKRSQ 561 Query: 389 NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL 448 + Q +A+ I L + V G + ++++R++ R+ + I D + ++ Sbjct: 562 RSGQQVALLFIDLDRFKFVNDTLGHNVGDQLLREVAIRLGHCVRESDTIARLGGDEFTVI 621 Query: 449 CRENV--QTFTR-KIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLA 501 E + R M++ + + ++ + P +N + +A Sbjct: 622 LPELHGPEGVARLAQGMIDKLEERYCIQDHELFISASIGITIYPEDADNMMDLVKNADVA 681 Query: 502 ISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGA 561 + +++ F F + + I + +R A+E G+ ++ YQP V ++ I G Sbjct: 682 MYRAKENGRGSFCFYTAEMNADARQLHKIEQALRVALEEGQFWIHYQPYVQQSSGLITGV 741 Query: 562 EALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLH 621 EAL RW ++ I+ P +FI +AE+ G I +G ++++ +G + + D Sbjct: 742 EALIRWRNSAGEIVYPDQFIPVAEETGLIVPIGLWVLRSVIGVIAQWQREG--HPDITFS 799 Query: 622 INVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVR 681 +NVS Q E H + ++EN + SL +EITE+++ R EH +++++ GVR Sbjct: 800 VNVSARQFQEGHLVGQIKAALQENQINPQSLMLEITESLMIRDPEHTLNMLKEIKALGVR 859 Query: 682 ISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIA 739 +++DDFGTG S+L + D +K+D F I +V I +A + VI Sbjct: 860 VALDDFGTGYSSLGYLKQFPIDLLKIDRSFINGIANSQDDETMVSAIVSMAHSLGVGVIG 919 Query: 740 EGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 EG+E++ + + C QG+ Y +PMP+ Sbjct: 920 EGIENDQQLQRVNLHACDYVQGFFYSRPMPYDEL 953 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 695 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 111/535 (20%), Positives = 203/535 (37%), Gaps = 37/535 (6%) Query: 265 NALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLA 324 N E + + S + + T+ E+ + Sbjct: 967 NEGAERLYGWTREEATGQS----IAELLYQDTQEFLRATRATQEQGEWAGEIVQFHRDGR 1022 Query: 325 FLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMA 384 L D + ++ +G I++I I + K E E + L YD +G M Sbjct: 1023 RL-DVEGRWTLIQGEQGQPDAILAIDTDIGQRKATERE----IQRLAFYDSLTGLPNRML 1077 Query: 385 IIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCC 435 +++ Q A+ I L + + G D+ + +++++ R+ Sbjct: 1078 LMDRMRHALATAQRRRQGGALLFIDLDNFKTLNDTLGHDQGDVLLQQVAARLNTCVRSVD 1137 Query: 436 DIVTFNADLYLLLCRENV--------QTFTRKIAMVNDFDSSFGYRNLRI----HKSAIC 483 + D ++++ T ++ + + + Sbjct: 1138 TVARLGGDEFVVMIEGLSTHPGELAMSARTVGEKILAVLATPYVLQGYHYRSTPSIGVAP 1197 Query: 484 EPLQGEN--AWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIG 541 G ++ LA+ + + F D + + ++R A+ Sbjct: 1198 F-GDGRTSTVGELLKQADLAMYQAKTAGRNTLRFFDPGMQAVVTARAELENDLRTALARE 1256 Query: 542 ELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTA 601 + L YQP +D ++ G EAL RW +RG++SP +FI +AE+ G + LG ++ TA Sbjct: 1257 QFMLHYQPQID-RRGSVTGVEALVRWPHPQRGMVSPGEFIPLAEETGLVLPLGRWVLHTA 1315 Query: 602 MGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVI 661 + + + + +NVS Q + F E + G A+ L +E+TE++ Sbjct: 1316 CAQLARWQHV-PGRGHLSMAVNVSSRQFHHEAFVEDVVRAITATGAPASRLKLELTESLF 1374 Query: 662 ERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--A 719 E + LR GV S+DDFGTG S+L + D +K+D F D+ Sbjct: 1375 VEDMETTIATMAALRSHGVGFSLDDFGTGYSSLSYLKRMPLDQLKIDQSFVRDLLADPND 1434 Query: 720 GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 IV I L+R + VIAEGVE+ + L + GC QGY + +P+P +A + Sbjct: 1435 AAIVDTIIALSRSLGLDVIAEGVETAEQRTRLEQAGCRAYQGYFFSRPLPETALE 1489 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 695 bits (1794), Expect = 0.0, Method: Composition-based stats. Identities = 106/482 (21%), Positives = 193/482 (40%), Gaps = 24/482 (4%) Query: 319 LVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESG 378 +++T + D +G I+ I E K AE + L +D +G Sbjct: 194 MIHTDGSIRDIIFSKTVFGNTDGSIGGIVGTILDITERKRAE----EAIQQLAYFDALTG 249 Query: 379 FIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAE 429 + + V + + + V G + ++ + RIA Sbjct: 250 LPNRTLLRDRVSQLLSQARREGGGFGVLHLDVDRFKGVNDSLGHACGDVLLSTVAGRIAS 309 Query: 430 KYAQCCDIVTFNADLYLLLCR---ENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAI 482 + + +D ++++ +V + + + I Sbjct: 310 SIRESDTVARLGSDEFVVILPGVGHEEDVVAVVRKIVEELNRPIVIQGNDIFCTASIGIA 369 Query: 483 CEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGE 542 P G +A + +A+ ++ + F + E + + ++R A+E E Sbjct: 370 IYPTDGSSADILLKNADMAMHKAKEFGGDGYQFYSSELNHRAMERLTLETSLRRALERRE 429 Query: 543 LFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAM 602 L YQP++ I + I+G EAL RW S E G++SP +FI +AE+ G I +G ++++A Sbjct: 430 FLLHYQPLLGIGSGRIVGVEALLRWDSPELGMVSPARFIPLAEETGLIVPIGEWVLRSAC 489 Query: 603 GEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIE 662 + R + + + +NVS Q F ++ GL L +E+TE+VI Sbjct: 490 EQLRALHELGYT--ELCVSVNVSARQFRHDGFCAMVAAVLAAVGLDPRYLELELTESVIM 547 Query: 663 RINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD--IFGTAG 720 +E + +L++ GV ++IDDFGTG S+L D +K+D F + + Sbjct: 548 ERSETAKGILRKLKQMGVSLAIDDFGTGYSSLSYLKHFPIDRLKIDRTFVKEVTVDQDNA 607 Query: 721 KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLV 780 I I LA + V+AEGVE+ + L L C QGY +P+P + + Sbjct: 608 AIAEAIVALAHVLNLDVVAEGVETAEQLAFLAALRCDVVQGYHIARPLPPRNLLEFLEAR 667 Query: 781 KE 782 +E Sbjct: 668 QE 669 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 695 bits (1794), Expect = 0.0, Method: Composition-based stats. Identities = 125/583 (21%), Positives = 236/583 (40%), Gaps = 29/583 (4%) Query: 214 DEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFY 273 + + + I++ ++A E++ + + + T+ ++ +V N F Sbjct: 359 GRINAVWRMVRDISEKRVAEERMQLAAKVFENTVEGIMITDADKRIRSV--NRAFSQITG 416 Query: 274 YPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQI 333 + +L + L E+ P+ I Sbjct: 417 FGQQEVLGQKPDM--LSSGRHDETFYEAMWSAINEHGSWQGELWNRRKNGEVYPEWL-AI 473 Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES----- 388 A++ G+ ++I + ++E K A ++ L +D +G I + Sbjct: 474 SAVRNAVGEITHYVAIFSDLSERKAA----DERIQFLAHFDVLTGLPNRAHIQDRVELAI 529 Query: 389 ----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 +N+ LA+ ++ L + + G + +++ L +RI + D Sbjct: 530 QNATRDNERLALLLLDLDRFKTINESLGHSAGDALLQVLAERIRSTLLTGEVVARQGGDE 589 Query: 445 YLLLCR---ENVQTFTRKIAMVNDFDSSFGYRNLRIHK----SAICEPLQGENAWSYAEK 497 +++L + + + N I P G + + Sbjct: 590 FIVLLPLIADPGSAALAAERIREVLEPPVELFNHSISITPSIGISVFPDDGRDFETLVRN 649 Query: 498 LKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 A+ + + + F E + I +R+A++ E L YQP VD+ T Sbjct: 650 ADAAMYHAKSAGRNSYKFYTADLNARAREILEIESQLRYALDRDEFVLHYQPQVDLKTGE 709 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 I+GAEAL RW E G++ P++FI +AE+ GFI ++G +I+ A + + ++ Sbjct: 710 IIGAEALIRWQHPELGLLGPVRFIEVAEERGFIVQIGNWVIQEACRQLAQWRRQGL--PR 767 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK 677 L +N+S Q + + +GL + L VE+TE+VI E I++++ Sbjct: 768 ISLAVNLSTLQFRQQDLAVHLQRALSAHGLVGSDLDVEVTESVIMDDVETTIHTIDRIKS 827 Query: 678 QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRI 735 G+++SIDDFGTG S+L D +K+D F DI I R I ++A+ + Sbjct: 828 MGLQLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPMDADDSAIARAIINMAKNLNM 887 Query: 736 PVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 VIAEGVE+ + + L + GC AQGYL KP+P +++ + Sbjct: 888 TVIAEGVETIEQWKFLDREGCHAAQGYLLAKPVPAKEFERLLE 930 >UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB1_CYAP4 Length = 884 Score = 694 bits (1793), Expect = 0.0, Method: Composition-based stats. Identities = 102/437 (23%), Positives = 193/437 (44%), Gaps = 20/437 (4%) Query: 361 IERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVF 411 + + +D + I+ + + L+V + L + + Sbjct: 438 QHKEQVIRYQAFHDLLTDLPNRALFIDRLNLALSNAHRSGEKLSVLFLDLDRFKTINDTL 497 Query: 412 GVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR--ENVQTFTR-KIAMVNDFDS 468 G +++++ + R+ + I + D + +L V + M++ + Sbjct: 498 GHSVGDQLLKAVAHRLTHCLREGDTIARWGGDEFTILLPQIHQVNDVAKTAQRMLSALEQ 557 Query: 469 SFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEI 524 F N + L G + + + +A+ + + + F N Sbjct: 558 PFHLENHELYITPSIGIAIYDLDGHDGETLIKHADMALYQAKQLGRNTYQFFCSGLSNGA 617 Query: 525 EENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIA 584 E + + +++RHA+E E L YQP V+I T I G EAL RW E G++ P F+++A Sbjct: 618 PERLNLEKSLRHALERQEFLLYYQPQVNIKTGKITGMEALLRWKHPEMGLVIPQLFMSVA 677 Query: 585 EDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKE 644 E+ G I +G +++TA + + + + + +N+S Q +P I+ E Sbjct: 678 EESGLIVAIGEWVLRTACAQNKTWQDQGL--PPICIAVNLSARQFRQPDLTGMIARILDE 735 Query: 645 NGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDS 704 GL L +EITET + E +++L+ G++IS+DDFGTG S+L + ++ Sbjct: 736 TGLPPQYLDLEITETTAIQDIEFTKRVLQELQDMGIQISMDDFGTGYSSLAHLQQFPLNT 795 Query: 705 IKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGY 762 +K+D F D+ +IV + LAR + V+AEGVE+++ L L C +AQGY Sbjct: 796 LKIDRSFVRDVAANSRDAQIVTAVIGLARGLNLNVVAEGVENDEQLNCLESLHCEEAQGY 855 Query: 763 LYQKPMPFSAWDKSGKL 779 ++ +P+ A + +L Sbjct: 856 IFNRPLEADAATEILQL 872 >UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5VXY3_SPIMA Length = 1092 Score = 694 bits (1793), Expect = 0.0, Method: Composition-based stats. Identities = 152/708 (21%), Positives = 263/708 (37%), Gaps = 50/708 (7%) Query: 85 VILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLV-DESGRVIFADFN 143 V + + +++ +V R + ++ NG +V + GR +F + Sbjct: 408 VTHIISTIKAIENPEIVNPSITAEAALRESEARLRTIISTSTNGLVVVNRKGRALFINPA 467 Query: 144 PSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNWRYL 203 AS P S L I +D L V V+++W Sbjct: 468 AEALFGRPASQLEG-------ELIGIPLVTKESTELEILRQDGQLKIVRMRVVEISWEQE 520 Query: 204 NEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVP 263 YL ++ + + QL S + I DS Sbjct: 521 TAYLASLTDVTDFKKTED--------QLKMFSRACDQSPVSIVITDSEGDIQYV------ 566 Query: 264 NNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTL 323 N FE Y G ++ + ++ + V ++ E Sbjct: 567 -NPKFEEITGYKAGEVIGQNPRILKSGYTTE--PEYDVLWRQITSGKQWSGEFHNKKKNG 623 Query: 324 AFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNM 383 + I ++ EG I++K I + K E L +YD + Sbjct: 624 ELFWE-HASICPMRDEEGYITHFIAVKEDITQQKHNE----EILAHQANYDALTDLPNRT 678 Query: 384 AIIESN---------NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQC 434 I + ++ +AV I L + + G + + ++++ R+ + Sbjct: 679 LIFDRLRQAITEAQVHHSNVAVMFIDLDHFKNINDTLGHELGDFLLKEAGMRLRGCIRKT 738 Query: 435 CDIVTFNADLYLLLCR---ENVQTFTRKIAMVNDFDSSFGYRN----LRIHKSAICEPLQ 487 + D +LL+ + VQ +++ F + P Sbjct: 739 DTVGRLGGDEFLLIIPKLDDLVQAEYIANQVLDVLGEPFNLCGEEAFISASIGIASYPQD 798 Query: 488 GENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVY 547 G+N + A+ + + + F F +E + I I +RHA+ EL +VY Sbjct: 799 GKNVSTLVRNADTAMYAAKQEGRNVFAFFTQNMNDEAQSRIIIENQLRHAISRNELSVVY 858 Query: 548 QPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRH 607 QP + +NT I+GAEAL RW + E G I P +FI IAE+ I +LG I+ A E + Sbjct: 859 QPFIHLNTSQIVGAEALMRWYNPELGNIRPDQFIAIAEESRLIVDLGEWILSQACQEVAN 918 Query: 608 FSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEH 667 + Q+ + + +N+SP QL P+ + NGL ++ L +EITE + Sbjct: 919 WHQQG--NNGLWVAVNMSPRQLRTPNLVNVIIEAIANNGLSSDCLELEITERSLVEEVPG 976 Query: 668 FYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKI--VRI 725 I+QL +R++IDDFGTG S+L +K+D F D+ I V+ Sbjct: 977 VQSLIKQLNHLKIRLAIDDFGTGYSSLSYLKRFPFSVLKIDKSFISDLPDDQDAIALVKT 1036 Query: 726 IFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 + +A + V+AEG+E+ L GC QGYL+ KP+P + + Sbjct: 1037 MITMAHGLGLVVVAEGIETTAQLDFLCNQGCDYGQGYLFSKPLPPAQF 1084 >UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BR92_9GAMM Length = 944 Score = 694 bits (1792), Expect = 0.0, Method: Composition-based stats. Identities = 115/538 (21%), Positives = 211/538 (39%), Gaps = 28/538 (5%) Query: 256 IEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSE 315 + N F Y ++ + K L E Sbjct: 412 GSDNRLLTVNDAFVDITGYSADEVVGKNPKF--LQSGRHDETFYRSMWQMINTSGYWRGE 469 Query: 316 MTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQ 375 + P I+A+ G A+ I+ + E K E KL L +D Sbjct: 470 IWNRRKNGEVFPQWL-SIQAVTDSAGMARNYIASITDLTERKQVE----EKLRYLSDFDP 524 Query: 376 ESGFIKNMAI---------IESNN-NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQ 425 + + + +Q A+ I L + + G ++I++K+ + Sbjct: 525 LTNLPNRRLLGYRVDQTLSLSRRQPDQQFALLYIDLDHFKNINDSLGHRFGDEILQKVAK 584 Query: 426 RIAEKYAQCCDIVTFNADLYLLLCRENV---QTFTRKIAMVNDFDSSFGYRNL---RIHK 479 RI E + + D +++L E Q ++++ + Sbjct: 585 RITELVREGDTVSRLGGDEFMILMPELHKLEQAANLAERILHNIAQPLENDSHLMITPSV 644 Query: 480 SAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAME 539 P G++ A+ + + + F E + + ++R A+E Sbjct: 645 GIAVYPNDGDSFDKLLRNADAAVHFAKRQGRNNYQFYTAEMNQRASERLQVEISLRKAVE 704 Query: 540 IGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIK 599 E L YQP +++ ++ G EAL RW G++ P +FI +AE+ G I ++G ++ Sbjct: 705 NQEFELFYQPQLNLRDGSLAGVEALIRWRHPNEGLVPPNRFIPLAEETGLILQIGSWVLV 764 Query: 600 TAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITET 659 A + + A + F + +NVS Q P E + + +GL SL +EITE+ Sbjct: 765 EACRQGAEW--AAKSTEPFTMSVNVSVRQFR-PELVEEVRSALLTSGLSPKSLVIEITES 821 Query: 660 VIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG-- 717 + + E + +L++ GV++S+DDFGTG S++ N D +K+D F D+ Sbjct: 822 TLMQDEEKTLTLLHELKELGVQLSLDDFGTGYSSMAYLKRFNLDQLKIDRAFISDLPQNP 881 Query: 718 TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 I I D+A + + +AEG+E + A L +GC++ QGY Y+KP+P + + Sbjct: 882 DDAAITSAIIDVASHFGLVTVAEGIEKPEQAEFLASVGCIEGQGYYYEKPIPANDLTE 939 >UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG8_METSD Length = 950 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 116/465 (24%), Positives = 196/465 (42%), Gaps = 29/465 (6%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES----- 388 +A+ G+ I I+ K AE ++ L YD + I+ Sbjct: 483 QAVYDLHGNITRIEGAIQDISAQKVAES----RIQHLAFYDSLTSLPNRQLFIDRLEHTL 538 Query: 389 ----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 ++ AV I L + + G D + +++++ RIA + + F D Sbjct: 539 AYSARTSKSGAVLFIDLDNFKTLNDTMGHDLGDMLLQQVAMRIAGCLRESDTVARFGGDE 598 Query: 445 YLLLCRE----NVQTFTRK----IAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAW 492 +++L E + + + ++ F F + Q Sbjct: 599 FVVLLHELSGNHQEAAAQARLVSEKILISFAHPFQFSGYEHHTSASIGVTLFDQQPTTVD 658 Query: 493 SYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVD 552 ++ LA+ + + F D I + + + ++R+ + E FL YQP VD Sbjct: 659 EILKRADLAMYQSKAAGRNVIRFFDPEMQALIADRVEMEEDLRNGLRNDEFFLCYQPQVD 718 Query: 553 INTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRA 612 N +LGAEAL RW + +RG+I P FI +AED G I +G ++ A + ++Q+ Sbjct: 719 -NQGRLLGAEALLRWRNPKRGMIPPSTFIPLAEDSGLIVSVGNWVMYAACKQLVLWAQQ- 776 Query: 613 SLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNI 672 L L +NVS QL + F ++ ++ G L +E+TE+++ E + Sbjct: 777 PLTSSLTLAVNVSAKQLRQMDFVDQIVEVLNVTGANPKRLKLELTESLMVNNIEDVIAKM 836 Query: 673 EQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLA 730 +L+ GV SIDDFG G S+L + D +K+D F D+ I R I L Sbjct: 837 TELKNIGVGFSIDDFGIGYSSLSYLKLLPLDQLKIDQSFVRDVLTDPNDAVIARTIIALG 896 Query: 731 RYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 + + VIAEGVE+ L GC QGYL+ KP+P +++ Sbjct: 897 KSLNLQVIAEGVETLSQREFLDNYGCDAYQGYLFSKPVPADEFER 941 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 103/478 (21%), Positives = 198/478 (41%), Gaps = 24/478 (5%) Query: 314 SEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISY 373 ++ E + ++ A + + + ++ I K E E L ++ Sbjct: 281 KQVFETRHQRKDGRIFPVEVSASQCLFNNEENHVAFVRDITIRKKYEKE----LEHQSNH 336 Query: 374 DQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLC 424 D +G + + + + AV ++ L + + G + + ++ + Sbjct: 337 DALTGLANRVLLDDRIQQAIVHAERAQRNTAVFLLDLDRFKVINDSLGHSQGDAVLLAVA 396 Query: 425 QRIAEKYAQCCDIVTFNADLYLLLCREN---VQTFTRKIAMVNDFDSSFGYRNLRI---- 477 +R++ + + D + ++ ++N F+ F N + Sbjct: 397 ERLSACISPGDTLSRLGGDEFAIVMTHVNHPADARIMAQKILNAFEQPFPLGNRELRITT 456 Query: 478 HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHA 537 A P GE + A+ + + F FC + + + + ++R A Sbjct: 457 SIGASLYPRDGEQSEDLLRHADAAMYQAKKQGGNGFQFCSEEMDTRAHKALELEGDLRQA 516 Query: 538 MEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQI 597 +++G L YQP V I + I G EAL RW ++G+ISP FI +AE+ G I LG + Sbjct: 517 LQLGSFVLHYQPKVKIASGKIDGCEALVRWNHPDKGMISPDDFIPLAEETGLIIALGEWV 576 Query: 598 IKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEIT 657 ++ A +F+ + + + +N+S Q + F E TI+ E + + L +E+T Sbjct: 577 LREACRQFKAWQAQGL--PPIKIAVNLSARQFLQSDFVESIQTILHEFDIDPHWLDLELT 634 Query: 658 ETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG 717 E+++ + + +L++ G +S+DDFGTG S+L D +K+D F D+ Sbjct: 635 ESMVMEDPDRIAKLLAELKQIGFALSLDDFGTGYSSLNYLRRFPIDCLKIDRSFILDVAS 694 Query: 718 TAGK--IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 A + + +A I IAEGVE+ + L C QGYL+ KP+P + Sbjct: 695 DATAASVANSVIGIAHSLGIHAIAEGVETREQYAFLAMCECDSIQGYLFSKPLPANDL 752 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 100/460 (21%), Positives = 189/460 (41%), Gaps = 23/460 (5%) Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNN- 391 I ++K + + + + K E ++ +D + + + + Sbjct: 472 ISSIK-EGTEIVGEVITFKDVTQRKQME----EEIKYHAYFDSLTDLPNRVLLKDRLTQG 526 Query: 392 --------QYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + LAV + L + V G + ++R++ R++ + + D Sbjct: 527 LTYAQLHAEKLAVLYLDLDRFKFVNDTLGHSFGDLLLREVANRLSACVPKSATVSRQGGD 586 Query: 444 LYLLLCRE---NVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAE 496 + + + +++ F F + I P G+ + Sbjct: 587 EFTIYLPNIKSEKEVLKVVNRVIDSFSRPFHLVDNEIYMKTSIGISIFPDNGDTTEILVK 646 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 A+ ++ S + F + E+I + ++ A+E EL + YQP ++ T Sbjct: 647 NADTAMYKSKEISGSSYHFFSEGMDTRTFESIKLENDLYKALEQEELVIYYQPQINGKTN 706 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 I G EAL RW E G+I P KFI IAE+ G I +G ++K A + + + + Sbjct: 707 KIEGVEALIRWNHQEHGMIPPDKFIPIAEETGLIVPIGEWVLKEACRQLKKWHDQG--SP 764 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +N+S QL + +++E L + +E+TE +I R E +++L+ Sbjct: 765 LISMSVNLSARQLEQSDLFAMVKNVLEEVELSPKYIQLELTENLIVRNTESTLKTMKKLK 824 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIP 736 G+ ++IDDFGTG S+L ++ ++K+D F D+ I I LA+ + Sbjct: 825 GLGINLAIDDFGTGYSSLGYLKKLPISTLKIDKSFVQDMTKDDAAITNTIITLAKNLNLD 884 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKS 776 VIAEGVE+++ L C QGY + +PM +K Sbjct: 885 VIAEGVETKEQVEFLSARNCYLMQGYFFSRPMAAEDIEKL 924 >UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KEH4_CYAP7 Length = 1027 Score = 692 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 150/777 (19%), Positives = 287/777 (36%), Gaps = 65/777 (8%) Query: 32 YQLVSERAVKRA-DSRFELIQKNVGYFFKDIERSALTLKDSL-----YLLKNTEEIQRAV 85 QL+S + S E+ + +G + + L + L +++ + A Sbjct: 281 QQLLSTAPEEVIGKSIQEVFPEPIGNQLYEGIQQVLLTRQPLSLEYSLNIEDKKRFFEAR 340 Query: 86 ILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLV-DESGRVIFADFNP 144 I+++ + + + L R + +++ NG L+ D G+V+F + Sbjct: 341 IVQLNQTEIIAVIRDISARKHTELALRESEERLSTIISTNPNGLLILDREGKVLFVNPAA 400 Query: 145 SK---RPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNWR 201 RP P + I ++ V + W Sbjct: 401 EILFGRPKKDLMGQI----------LGLPIIVNNYSEIEILQPTGKMVIARIRQVKILWE 450 Query: 202 YLNEYLDQISANDEVLFLKQGHEIIAKNQLARE-KLIIYNSEGNYNIIDSVDTEYIEKTS 260 +L + ++ ++ +I+ + +II ++EG+ + Sbjct: 451 EKEAFLASLVDVTDLKGAQKQLKILKQATEQSPVSVIITDAEGHIEYV------------ 498 Query: 261 AVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELV 320 N FE Y ++ + +L T + E Sbjct: 499 ----NRKFEKLTGYTRQEVIGKNPRLLKSGKISQD--QYKQLWRTLTSGQEWHGEFHNQK 552 Query: 321 NTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI 380 +S I +K EG I+IK I K + L +YD +G Sbjct: 553 KNGELFWES-ASISPIKNEEGVITHFIAIKEDITRRKA----QDRILAYQANYDALTGLP 607 Query: 381 KNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKY 431 I+ Q +AV I L + V G + + +++++ +R+ + Sbjct: 608 NRFLAIDRLKLAILQAERQEQRVAVMFIDLDRFKNVNDTLGHEYGDLLLKQVAERLKKCL 667 Query: 432 AQCCDIVTFNADLYLLLCRENVQTFT---RKIAMVNDFDSSFGYRNLRI----HKSAICE 484 + + D +L++ Q +++ + F Sbjct: 668 RKSDTVARLGGDEFLIIIPNLKQPSHCKGIAKKILSSLEKPFNLLEEEAFISASIGITLY 727 Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELF 544 P G++ + A+ + ++F F I I + A++ E++ Sbjct: 728 PDDGDDVNALMRNADTAMYLGKRGGRNDFKFYTLGMNETNRTRIIIENLLHQALKKKEIY 787 Query: 545 LVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGE 604 LVYQPI+++ T ++GAEAL RW + + G +SP +FI IAE+ G IN+LG +I A E Sbjct: 788 LVYQPIMELKTEKVIGAEALLRWNNPQLGQVSPDQFIPIAEETGLINQLGAWVISQACQE 847 Query: 605 FRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERI 664 + + + + +N+SP Q + + T + NG+ + L +EITE ++ Sbjct: 848 VVQWKAQGT---PISVAVNLSPRQFRDSKLLKIITDAIAVNGITNHDLELEITEKLLLED 904 Query: 665 NEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKI-- 722 + + QL + +SIDDFGTG S L + + +K+D F D+ + + Sbjct: 905 SPGSQGILSQLHQMNFPLSIDDFGTGYSALSYLIKFPFNRLKIDRSFITDMTHSQKAMGL 964 Query: 723 VRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKL 779 V+ I ++ + VIAEGVE+ + L GC AQGY + +P+ + +L Sbjct: 965 VKTIIAMSHGLNLQVIAEGVETSEQLNSLKSQGCDYAQGYFFSRPLTGEEFRYYLQL 1021 >UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY96_DESAC Length = 904 Score = 692 bits (1787), Expect = 0.0, Method: Composition-based stats. Identities = 114/578 (19%), Positives = 214/578 (37%), Gaps = 34/578 (5%) Query: 218 FLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGG 277 + H+ + ++++ +I ++D N E Y Sbjct: 340 IVDLDHQRKESEKQLLLSSSVFDNAVEGIVITNLDG------IIEQVNPACEAMSGYRLK 393 Query: 278 NLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALK 337 L+ + ++F + R E+ P + I Sbjct: 394 ELIGENPRIFRSDH--HNSAFYQQMWQSLIEEGRWEGEVWNRRKNGEVYPLNV-SISRCT 450 Query: 338 IREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--------- 388 G ++I + I+E+K +E KL +D + + Sbjct: 451 NSAGIPSHYVAIFHDISEIKRSE----EKLQHQAYHDALTNLPNRKLFHDRLSVAVAHAR 506 Query: 389 NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL 448 + LAV + + + + G +K+++++ +R+ Q D +++L Sbjct: 507 QHKTKLAVIYLDIDNFKYINDSLGHHYGDKLLQQISERLLSCTRQEDTTARLGGDEFIIL 566 Query: 449 CRENVQTFTRKI---AMVNDFDSSFGYRNLR----IHKSAICEPLQGENAWSYAEKLKLA 501 E + ++ + + P + + +A Sbjct: 567 MPEIEDPHDITVLCRRILKQLELPHALSGRDYTVNVSMGVTVFPDDADTPEDLIKNADIA 626 Query: 502 ISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGA 561 + ++ + + A I + I + + A+ E L YQP VD+ + ++GA Sbjct: 627 MYRAKEAGKNGYQLFTAAMQQTIMQRIELEARLSDALCRNEFVLFYQPQVDLESEHVIGA 686 Query: 562 EALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLH 621 EAL RW + ++ P +FI IAE+ G I ++ + ++K A + + ++ +F + Sbjct: 687 EALIRWQKPDGQLVYPDEFIPIAEECGLITQIDHWVLKAACRQANKWREQ--SGRNFKMS 744 Query: 622 INVSPWQL-NEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGV 680 +N+S Q + +R ++ + GL A L +E+TE + E + QL GV Sbjct: 745 VNLSSEQFAKDQELVQRVKNVLNKTGLPAECLTLEVTENAVMSDTESAIAIMTQLTALGV 804 Query: 681 RISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVI 738 I+IDDFGTG S+L +K+D F DI G + I I L R + VI Sbjct: 805 SIAIDDFGTGYSSLSYVKNFPARYLKIDRSFVKDIPGDSDDMAIAASIISLGRNLNMEVI 864 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKS 776 AEGVE + L + C Q QGY Y KP + + Sbjct: 865 AEGVEEQTQIDFLKQHRCQQVQGYFYGKPCAAEFFSQQ 902 >UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIL1_9PROT Length = 576 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 112/461 (24%), Positives = 192/461 (41%), Gaps = 24/461 (5%) Query: 335 ALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES------ 388 + G +I + I E AE ++L + +YD +G + + Sbjct: 119 PICDTSGKPLYLIGMFVDITERHRAE----QRILEMATYDILTGLPNRALLKDRIERALE 174 Query: 389 ---NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLY 445 N Q +A+ I L + + G D +K+++ + R + D + Sbjct: 175 HGNRNRQRVALLFIDLDNFKVINDSLGHDVGDKLLQAVAARFVSIVRGEDTVARQGGDEF 234 Query: 446 LLLCRENV---QTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKL 498 ++L ++N F + P GE+ W+ Sbjct: 235 IVLLSNLESAFDAEAVAQKILNALQLHFLIDGKELHISGSIGISLFPDDGEDIWTLLRNS 294 Query: 499 KLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAI 558 +A+ + + + F + +E + +R+A++ EL L YQPIV++N Sbjct: 295 DIAMYHAKKNGRNNCEFFKPEMNRQAKERHSMEVALRNALKRDELLLHYQPIVNVNGGKA 354 Query: 559 LGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDF 618 G E L RW G+I P+KFI +AE+ G I +G +++ + + + + ++ Sbjct: 355 DGFEVLLRWQHPGDGLIYPVKFIRLAEETGMIIPIGEWLMRQSCLQIKAWQEQGYEVP-- 412 Query: 619 LLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQ 678 L IN+S Q + E I+ E G+ + L +EITE+ + E + QL + Sbjct: 413 RLAINLSAIQFRQKTLMENIVRILDETGVTGHYLTLEITESELIEDVEETIKTLRQLSEL 472 Query: 679 GVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIP 736 G+ ISIDDFGTG SNL +++K+D F DI I+ I +A + Sbjct: 473 GIEISIDDFGTGYSNLSFLKRYQINTLKIDRSFVRDIPDDPDDTAIIDAILVMAHALGLQ 532 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 VIAEGVE+E L GC + QG+ + KP+P +K Sbjct: 533 VIAEGVENEQQLAYLALHGCTRFQGFYFSKPLPAIEIEKKM 573 >UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U882_9DELT Length = 958 Score = 691 bits (1785), Expect = 0.0, Method: Composition-based stats. Identities = 120/594 (20%), Positives = 237/594 (39%), Gaps = 34/594 (5%) Query: 202 YLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSA 261 + N Y+D++ + L + A+ +L + + N+ +I D Sbjct: 370 HFNRYMDRLVDFRDELRAEIDERTRAEQRLRLYEKVFENALEGISITDKSGV-------M 422 Query: 262 VPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVN 321 V N F + ++ + ++ L T + E+ Sbjct: 423 VAVNPAFTTITGFTSEEVIGKNPRV--LKSDMHGEEFYGEMWTTLKARGSWHGEIWNRRK 480 Query: 322 TLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIK 381 P+ I +++ +G+ +++ + I++MK E +L + +D +G Sbjct: 481 NGESYPE-ILSISSIRDDDGEIANYVAVFHDISDMKHKE----EQLAHHLYHDGLTGLPN 535 Query: 382 NMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYA 432 + +++ +AV + L + + FG + + +++ + +R+ Y Sbjct: 536 RVLVLDRLSMALSHANRTGTKVAVLFLDLDNFKKINDSFGHAQGDTLLKAVAERLVALYR 595 Query: 433 QCCDIVTFNADLYLLLC---RENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEP 485 + D +L++ E + + F+ F + + P Sbjct: 596 DEDTVARQGGDEFLVVVVDVHEEREVVDLAEGLQRVFEEPFVIKGQEVFITPSIGVTLYP 655 Query: 486 LQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFL 545 G++ S + +A+ + + + I + + + ++R A++ E + Sbjct: 656 DDGQDPASLVKNADMAMYQSKAKGRNSYFLFTQQMSERIAQRLTLESDMRRALKEREFTV 715 Query: 546 VYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEF 605 +QP VD+ + + G EAL RWV + I+SP FI +AE+ G I LG ++ + Sbjct: 716 YFQPKVDLASGEVSGLEALVRWVKPDGIIVSPEDFIPMAEETGLIVPLGEFVLDASCKAM 775 Query: 606 RHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERIN 665 + + +N+SP Q + E ++ NGL A+ L +EITE+ + Sbjct: 776 QVLQ--GVGCSALTVAVNLSPIQFGQEDLVEMVVANLERNGLPASRLELEITESTLMTDV 833 Query: 666 EHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIV 723 + + +L + G+ ISIDDFGTG S+L ++K+D F DI KIV Sbjct: 834 QSSVAQLNRLVELGITISIDDFGTGYSSLYYLKNFPISTLKIDRSFIRDITIDDSDAKIV 893 Query: 724 RIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 + +AR I V+AEGVE+++ L GC QGY Y +P+P + Sbjct: 894 ETVVLMARTMGIGVVAEGVETKEQLDLLATFGCATVQGYYYSRPLPLEKIIEFL 947 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 691 bits (1785), Expect = 0.0, Method: Composition-based stats. Identities = 119/555 (21%), Positives = 214/555 (38%), Gaps = 34/555 (6%) Query: 244 NYNIIDSVDTEYIEKTSAVPNNAL------FEIYFYYPGGNLLNASDKLFYLPFAFIIIV 297 I++ + +A P L FE Y + + K Sbjct: 262 RTRAIEACVNPIVIVDTATPGMPLIYVNGAFETITGYSSEEAIGRNCKFLQ---GMDTDQ 318 Query: 298 LLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREG-DAKEIISIKNSIAEM 356 + L +R S + + + + I + G + + + ++ Sbjct: 319 PELGKLRAAIREQRPASVLLRNYHKDGSMFLNELYIAPVSDTSGGAVGHFVGVLYDVTQI 378 Query: 357 KDAEIERSNKLLSLISYDQESGFIKN---------MAIIESNNNQYLAVGIIKLCGLEAV 407 K + L +YD +G + ++ +L++ I L + V Sbjct: 379 KRYQ----EDLEHQANYDTLTGLANRNLLNERTQQALLQARRHDHFLSLVFIDLDNFKLV 434 Query: 408 EAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENV---QTFTRKIAMVN 464 G ++++ + R+ + D ++LL + Sbjct: 435 NDSMGHGAGDELIANVGSRLQTCVRDGDTVARIGGDEFVLLLTNQSVSDSNAGVMQRIQA 494 Query: 465 DFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAK 520 + R I P GE++ S A+ + + F F Sbjct: 495 ELIKPMWIRGQEIVVTCSMGVARFPEDGEDSESLLANADTAMYRAKSSGRNNFQFYTKEM 554 Query: 521 LNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKF 580 E + + ++ HA++ ELFLVYQP +D+ ++G EAL RW +RG+I+P+ F Sbjct: 555 NATSGERLSLESDLWHALKNDELFLVYQPQIDLRDGTVIGMEALIRWQHPKRGLIAPMDF 614 Query: 581 ITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTT 640 I +AE G I +G +++TA + + IN+S QL++ +F E + Sbjct: 615 IPMAECNGLIIPIGIWVLETACRHNLQLQKEGL--PPIRVAINLSARQLSDRNFVESVQS 672 Query: 641 IMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEI 700 +++ GL + L +E+TE+++ E + + L K G+++S+DDFGTG S+L Sbjct: 673 VIEAIGLDPHYLELEVTESMVMHNVEDVVVTLNDLNKMGIQLSLDDFGTGFSSLAYLKRF 732 Query: 701 NPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQ 758 D +K+D F + G I + I LA +I VIAEGVE + L K GC + Sbjct: 733 PIDRLKIDQSFIFNCDSDPGDAIIAQTIIALAHGLKIKVIAEGVEKSEHLSFLKKNGCDE 792 Query: 759 AQGYLYQKPMPFSAW 773 QGY +P+ F Sbjct: 793 GQGYFISRPLTFDDL 807 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 691 bits (1784), Expect = 0.0, Method: Composition-based stats. Identities = 118/545 (21%), Positives = 220/545 (40%), Gaps = 32/545 (5%) Query: 256 IEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSE 315 K N F Y LL + L + T + E Sbjct: 715 DVKGRITYANDKFSEISGYSIEELLGQDHAI--LNSGYHPKGYFKEMYRTVANGQVWHDE 772 Query: 316 MTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQ 375 + + I +G + ISI+ I + K AE + + L YD Sbjct: 773 ICNRAKDGSLY-WVDTTIAPFIGDDGKPQSYISIRTDITQRKAAEDKSN----YLALYDP 827 Query: 376 ESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQR 426 + +++ + A+ + L + + G D + +++++ + Sbjct: 828 LTNLPNRRLLLDRLTHALASAMRTGRGGALLFLDLDHFKTLNDTLGHDVGDLLLQQVAEC 887 Query: 427 IAEKYAQCCDIVTFNADLYLLLCR----ENVQTFTRKI----AMVNDFDSSFGYRNLRIH 478 + + + D ++++ + V+ + ++N F + ++ H Sbjct: 888 LTACVREGDTVARLGGDEFVVILEGLSEQEVEAAAQAEVVGEKILNKFIEPYQFKGYEYH 947 Query: 479 K----SAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNI 534 + ++ +A+ + + F D I+ + + + Sbjct: 948 ITSSVGITLFGKNNLKSDELLKQADIAMYQAKKLGRNALSFFDPKMQEGIQARVDMEHEL 1007 Query: 535 RHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELG 594 R A++ E L YQ V ++ +GAEAL RW+ ERG+I P +F++IAED G I +G Sbjct: 1008 RKALDKNEFQLFYQMQVGLSD-RAVGAEALIRWIHPERGLIPPNEFVSIAEDCGMILSIG 1066 Query: 595 YQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCV 654 +I TA + + + +++ L +NVS Q + F E+ TT + +G+ L + Sbjct: 1067 AWVIDTACAQLKRW-EQSERTRSLTLSVNVSAKQFRQADFVEQVTTAIARHGINPMLLKL 1125 Query: 655 EITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD 714 E+TE+ + E + L+ G+R S+DDFGTG S+L+ + +K+D F D Sbjct: 1126 ELTESALLDHIEDAVAIMNALKDIGIRFSLDDFGTGYSSLQYLRLLPLYQLKIDRSFVRD 1185 Query: 715 IFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 I + IVR I +A + VIAEGVE++ L+ GC+ QGYL+ +P+P A Sbjct: 1186 IASSIGNQAIVRTIIAMAHTLNLNVIAEGVETQVQQGILLDSGCMHYQGYLFSEPVPIDA 1245 Query: 773 WDKSG 777 ++ Sbjct: 1246 FEALL 1250 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 691 bits (1783), Expect = 0.0, Method: Composition-based stats. Identities = 98/446 (21%), Positives = 180/446 (40%), Gaps = 23/446 (5%) Query: 345 EIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLA 395 ++ N + + K+ E ++ +D +G A+ + LA Sbjct: 571 RLVGTVNDVTDQKENE----EQIERYAHFDALTGLANRHALYRRLGQAITSVHQHQHPLA 626 Query: 396 VGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQT 455 V + L + + G + ++R++ R+++ + D +LL+ + Sbjct: 627 VLFVDLDKFKTINDTLGHAVGDVVLREVAGRLSDFAGPDDILARLGGDEFLLVLPGADER 686 Query: 456 FTRKIA--MVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHM 509 ++A ++ + P GE A +A+ + Sbjct: 687 AASEVAACILTAMSVPVRVDGRELPTTPTIGVSLYPRDGEEADDLIRNADIAMYQAKARG 746 Query: 510 FSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVS 569 + F E + + +R+A GE+ L YQP +D+ ++G EAL RW Sbjct: 747 RNTFQLYTPDMNAAAAERLQLQGELRNAHLRGEIMLHYQPQIDVTDGHVVGCEALMRWKH 806 Query: 570 AERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQL 629 G++SP +FI +AE+ G I LG I+ A + + + + +N+S Q Sbjct: 807 PTLGMVSPGRFIPLAEESGLIITLGNWAIREACRQAMVWQRAGL--PPLTVAVNLSGCQF 864 Query: 630 NEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGT 689 + +F + + L L +E+TE+++ E + +L+ GV++SIDDFGT Sbjct: 865 QQSNFTAVVADALADTSLPPQYLELELTESIVMHDVEQVIATLTELKALGVQLSIDDFGT 924 Query: 690 GLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDV 747 G S+L D +K+D F D+ IVR I L + + +IAEGVE++ Sbjct: 925 GYSSLNYLKRFPVDLLKIDQGFVRDVETDPSDAAIVRAIIALGKILNLRLIAEGVETQGQ 984 Query: 748 ARELIKLGCVQAQGYLYQKPMPFSAW 773 L G QGY + +P+P Sbjct: 985 LDYLHAAGVDFIQGYYFSRPLPAEDM 1010 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 690 bits (1782), Expect = 0.0, Method: Composition-based stats. Identities = 117/464 (25%), Positives = 209/464 (45%), Gaps = 25/464 (5%) Query: 328 DSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE 387 D Q + +K + G I++ I + + E+ ++ L +D +G + + Sbjct: 589 DVELQAQVVKDQNGGPLSILASAIDITDKRKTEL----QIKKLAYFDSLTGLPNRTLLKD 644 Query: 388 ---------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIV 438 N+++AV ++ L + + G + ++R + +R+ + C + Sbjct: 645 HMELALGQARRLNKFVAVLLLDLDNFKHINDTLGHATGDLLIRSVAERLRTECRTCDTLA 704 Query: 439 TFNADLYLLLCRE--NVQTFTRKIAMVNDF--DSSFGYR----NLRIHKSAICEPLQGEN 490 + D ++LL + ++Q T + F N P G++ Sbjct: 705 RWGGDEFVLLLTDLDDIQNTTSATEKFMALLTERPFATSECDINTTASIGIALYPQDGQD 764 Query: 491 AWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPI 550 + ++ A+ + + + + F + E + N+R A++ GE+ LVYQP Sbjct: 765 PETLLKRADTAMYEAKKNGRNGYHFFSLQLAEQAERRHRMEINLRSALKEGEMQLVYQPQ 824 Query: 551 VDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQ 610 +D+ I G EAL RW S E G ISP +FI +AE+ G I LG +++ A + + + Sbjct: 825 IDLGKVRITGMEALLRWQSPEEGTISPARFIPLAEETGLIYPLGEWVLQQACRQGAIWQK 884 Query: 611 RASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYL 670 + +N+S Q ++P + I++E GL + L +EITE+V E Sbjct: 885 T--EASPLCVAVNLSAKQFHQPDLAKNIKKILRETGLSPHLLELEITESVFLENMEAAIE 942 Query: 671 NIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFD 728 + +L+K GV+ SIDDFGTG S+L ++ D IK+ +F DI G I++ Sbjct: 943 ALTELKKLGVQFSIDDFGTGYSSLSYLKKLPIDRIKIAQEFVRDIDTDDGDKAIIKATIA 1002 Query: 729 LARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 +A+ + +IAEGVE+ L+ GC QGY + KPMP Sbjct: 1003 MAKSLGMKLIAEGVENHQQLAFLLLHGCHAMQGYYFAKPMPAQE 1046 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 104/486 (21%), Positives = 198/486 (40%), Gaps = 25/486 (5%) Query: 311 RQFSEMTELVNTLAFLPDSTDQI-EALKIREGDAKEIIS-IKNSIAEMKDAEIERSNKLL 368 +++E + L ++ + ++ R + +E + + I + + + ++ Sbjct: 272 WIVMDVSERLRIQRQLAGMHGELEQQVRDRTRELQETVGNLHREIQDRQRDQ----ERIY 327 Query: 369 SLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKI 419 + YD + + + E + LAV + L + V G + + Sbjct: 328 WMAHYDALTELPNRVLLAERGQDAIRQAQESGAPLAVMFLDLDNFKHVNDSLGHRIGDAL 387 Query: 420 VRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKI--AMVNDFDSSFGYRNLRI 477 + ++ QR+ Q + D ++LL ++ M ++ + Sbjct: 388 LVEIAQRLRTTVRQRDTVARLGGDEFVLLLPGANAQGAARVAAKMQEAALQPVHIQHHEL 447 Query: 478 H----KSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARN 533 P G + + + A+ + + F F + + + Sbjct: 448 SLALSMGIALFPEHGSDFETLIQSADTAMYRAKADGRNSFRFFTPTMQAQSARALQLTNA 507 Query: 534 IRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINEL 593 +R A+E +L L YQP V I T + G EAL RW E G +SP +FI +AED G I + Sbjct: 508 LRRALERNQLSLHYQPQVSIATGRVCGVEALLRWHHPELGAVSPAEFIPVAEDTGQILPI 567 Query: 594 GYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLC 653 G +++TA+ + R + + + +N+S Q +P E ++ E G++ + L Sbjct: 568 GEWVLRTALAQLRTWHSQGL--PALTMAVNLSAVQFRQPQLLELVDRLLAEYGVQPHLLE 625 Query: 654 VEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTG 713 +E+TE V ++QL +GVR+S+DDFGTG S+L +K+D F Sbjct: 626 LELTENVAVADPHAAIATMDQLHAKGVRLSMDDFGTGYSSLSHLKRFQIYRLKIDQSFVR 685 Query: 714 DIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFS 771 D+ IV I +A+ + AEGVE+ L + GC +AQG+ + +P+ Sbjct: 686 DLDHDGNDRAIVSAIIRMAQALGMRTTAEGVETAHQLTFLREQGCDEAQGFYFSRPLGAP 745 Query: 772 AWDKSG 777 + Sbjct: 746 HLQQYL 751 >UniRef50_B4VY11 PAS fold family n=2 Tax=Oscillatoriales RepID=B4VY11_9CYAN Length = 1393 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 104/491 (21%), Positives = 207/491 (42%), Gaps = 23/491 (4%) Query: 311 RQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSL 370 L++ + ++ ++ ++ +G IS I++ K E +LL Sbjct: 906 SHLQTERRLISKSGRIVNAILKVVLVRDAQGQPLHYISQVVDISDRKRME----EQLLHD 961 Query: 371 ISYDQESGFIKNMAIIES----------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIV 420 +D +G ++ + AV ++ L + + G ++++ Sbjct: 962 AFHDVLTGLPNRALFMDRLEYALRRAGQRWDYLCAVIVLDLDRFKVINDSLGHLVGDRLL 1021 Query: 421 RKLCQRIAEKYAQCCDIVTFNADLYLLLC---RENVQTFTRKIAMVNDFDSSFGYRNLRI 477 + +R+ + D + +L ++ +SSF + Sbjct: 1022 SAIAERLQGCLRPSDTLARLGGDEFTILLDDIPNTAAATDIAKSIHQTLESSFNLDGYEV 1081 Query: 478 ----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARN 533 + A A+ + + ++ D A + + Sbjct: 1082 FATASIGIALSGMGYHRAEDLLRDADTAMHRAKLQGTACYVMFDTAMSGRALAQLRLETE 1141 Query: 534 IRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINEL 593 +R A+E EL + YQPI+ + T I G EAL RW E+G+ISP FI +AE+ G I + Sbjct: 1142 LRWAIERQELEVYYQPIISLGTGKITGFEALVRWQHPEQGMISPGAFIPLAEETGLIIPI 1201 Query: 594 GYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLC 653 G +++T+ + R + Q+ + +N+S Q ++ + E+ I++E + ++L Sbjct: 1202 GQWVLRTSCYQLRQWQQQFPHYPPLTMSVNLSGKQFSQTNLIEQIAQIIQETEVNPSTLK 1261 Query: 654 VEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTG 713 +EITE+ I ++ +E+L+ +++ IDDFGTG S+L R ++ D++K+D F Sbjct: 1262 LEITESGIMEHSDSASALLERLKALNIQLYIDDFGTGYSSLSRLHQFPIDALKIDRSFVS 1321 Query: 714 DIFG--TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFS 771 + G+IV+ I LA + V+AEG+E+ +L C QGY + KP+ Sbjct: 1322 RMGDAGENGEIVQAIVTLAHNLGMDVVAEGIETNMQLAQLRGRRCEYGQGYFFSKPLNRQ 1381 Query: 772 AWDKSGKLVKE 782 A ++ + + Sbjct: 1382 AAEQLMMNLPQ 1392 Score = 54.3 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 56/182 (30%), Gaps = 8/182 (4%) Query: 184 KDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEG 243 V H R+ + + + A VL L GH+ N ++ I ++ G Sbjct: 532 GQEQPFGVLGAHTTSQRRFSEDDIHFLQAVANVLALAIGHQQSEANLYLMQRAIAASNNG 591 Query: 244 NYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYL 303 II + + N FE Y ++ + + + P V + Sbjct: 592 --VIITDPNQP---DNPVIYVNPAFESMTGYTAKEVIGHNCRFWQEPDYNQAGVTKLATA 646 Query: 304 MTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIER 363 + +R+ + + + + + +G + I+ I + K AE Sbjct: 647 IQ---EQRECHVILQNYRKDGSTFWNELYVSPVFDGDGYLTHFVGIQTDITKRKQAEEAL 703 Query: 364 SN 365 Sbjct: 704 RQ 705 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 689 bits (1780), Expect = 0.0, Method: Composition-based stats. Identities = 123/555 (22%), Positives = 222/555 (40%), Gaps = 29/555 (5%) Query: 245 YNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFA---FIIIVLLVV 301 + + + S N + E+ F +P + S + A +I + Sbjct: 91 IDTANDAFITIDAEGSISDWNPMAEMIFGWPEDLAIGKSMMDLIMNQAPRNALIDDIQEF 150 Query: 302 YLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEI 361 + F + +T L P + I G + I++ K E Sbjct: 151 INTGSAPFTQGQIVITALHRDGHEFP-AEMSISP--QAVGASFIFNIFVRDISQRKADE- 206 Query: 362 ERSNKLLSLISYDQESGFIKN----MAI-----IESNNNQYLAVGIIKLCGLEAVEAVFG 412 KL +L + D+ +G I + + + + LAV + L G + + G Sbjct: 207 ---EKLETLATRDELTGLINRFSYNHLLKKEVALAKRHMESLAVLFLDLDGFKNINDSLG 263 Query: 413 VDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRK---IAMVNDFDSS 469 D ++++R+ R++ + + D +L++ + ++N Sbjct: 264 HDVGDQLLRETANRLSACIRESDTVARIGGDEFLIIMPGIKDVHDPRFLCERILNMIGQP 323 Query: 470 FGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIE 525 + PL G+N S + A+ +D + + F A E Sbjct: 324 YLIGTQECFVGASIGISLYPLDGDNVESLVKNADTAMYQAKDSGRNAYKFFTPAMGEEAF 383 Query: 526 ENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAE 585 + + + R +R+A+E + L+YQP V++++ ILG EAL RW E G ISP FI++ E Sbjct: 384 KRMEMERALRYAIEKNQFKLLYQPQVELSSGRILGVEALLRWTHPEWGPISPSVFISLIE 443 Query: 586 DIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKEN 645 + I +G ++ A + + + + +N + Q + E ++++ Sbjct: 444 NTNLILPIGEWVLDEACKQNKAWQALHPGF-PLRMAVNFAARQFAQADLVETVAKALQKS 502 Query: 646 GLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSI 705 GL A L +EITE E ++ L++ GV I+IDDFGTG S+L D + Sbjct: 503 GLAAEFLELEITEGSAMNDIELNIRKMQALKELGVSIAIDDFGTGFSSLAYLKRFPIDIL 562 Query: 706 KVDSQFTGDIFG--TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYL 763 K+D F +I IV I ++A + VIAEGVE++ L GC QGYL Sbjct: 563 KIDKSFLDEIQHGKKDAAIVATISEMAHSLGMEVIAEGVETKYQLEFLRGHGCDMIQGYL 622 Query: 764 YQKPMPFSAWDKSGK 778 + +P+P + + Sbjct: 623 FSRPVPPEQIAEILQ 637 >UniRef50_B2UIB3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=8 Tax=Ralstonia RepID=B2UIB3_RALPJ Length = 916 Score = 689 bits (1780), Expect = 0.0, Method: Composition-based stats. Identities = 133/604 (22%), Positives = 226/604 (37%), Gaps = 36/604 (5%) Query: 198 LNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIE 257 + +LD ++ V K E R +L I N II Sbjct: 311 MPVEEEQHFLDDVTHLAGVAIQKDNVERGLAESEERYRLAISNLHEGVVIISPDGV---- 366 Query: 258 KTSAVPNNALFEIYFYYPGGNLLNASD----KLFYLPFAFIIIVLLVVYLMTTRVFRRQF 313 NA E G L+ + + + I ++ R F Sbjct: 367 ---VQAANASAERILRVRPGQLVGRNRLDPIQRVVDEYGKEIGSTMMPSGQVLRTGEPIF 423 Query: 314 SEMTELVNTLAFLPDSTDQIEALKI-REGDAKEIISIKNSIAEMKDAEIERSNKLLSLIS 372 + L+ L I ++ E ++ I ++K AE +L L + Sbjct: 424 GRVYGLLLKTGELMWVRQNIIPIRRHAEPTPSSVMLSFADITDIKRAE----QRLRHLAA 479 Query: 373 YDQESGFIKNMAIIE---------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKL 423 +D +G I + ++ LA+ + L ++V G + +++ Sbjct: 480 HDALTGLTNRSFFIAHLESAIESARDESRELALFFLDLDRFKSVNDTAGHACGDTLLQSA 539 Query: 424 CQRIAEKYAQCCDIVTFNADLYLLLCRENVQ---TFTRKIAMVNDFDSSFG-YRNLR--- 476 R+ + I D +++L + V+ ++ F Sbjct: 540 AARLTDCIGPGDVIARLGGDEFVILIDQRVEGKRIALLAERLLQAMREPFDTVNGRYYLG 599 Query: 477 IHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRH 536 + P G + A+ + + + F ++ + +R Sbjct: 600 VSIGVALYPHDGISGSDLLRSADAAMYRAKQNGRNRAQFYTAELNARLQRRYMLENALRD 659 Query: 537 AMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQ 596 A E EL LVYQP D+ + I+GAEAL RW SA+ G ISP++FI +AE+ G I +G Sbjct: 660 ARENNELQLVYQPKYDLASHRIVGAEALLRWNSAKLGAISPVEFIPVAEETGLIVPIGAW 719 Query: 597 IIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEI 656 +++ A + + + L DF + +N+S Q + ++GL +L VEI Sbjct: 720 VLRRACEQAVIWYEA--LGYDFRMAVNLSARQFQAGDVVPMIEQTLADSGLPPTALEVEI 777 Query: 657 TETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF 716 TE+++ + + L QG+RISIDDFGTG S+L ++K+D F I Sbjct: 778 TESLLMGGADEVRPMFDALTAQGIRISIDDFGTGYSSLSYLQRFPISNVKIDRSFITGIP 837 Query: 717 GTAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 + I +AR + V AEGVE D L K GC + QGY KP+ +D Sbjct: 838 HDPDSVALTEAIVAMARALGMTVTAEGVEDADQVEFLAKAGCQEIQGYYIGKPVTAEGFD 897 Query: 775 KSGK 778 + + Sbjct: 898 RLLR 901 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 689 bits (1780), Expect = 0.0, Method: Composition-based stats. Identities = 114/498 (22%), Positives = 200/498 (40%), Gaps = 25/498 (5%) Query: 298 LLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMK 357 LLV + R FS LV+ Q E+ + + I I E K Sbjct: 198 LLVQSFTSLRTEGVPFSLEHRLVHADGTERCVLHQAESGRDPNHAII-LRGIVQDITERK 256 Query: 358 DAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVE 408 + ++ L ++D +G + + Q +AV ++ L + + Sbjct: 257 MQQG----RIEYLANHDALTGLPNRNLLSDRMEQAMSQARRTGQLVAVMVLDLDRFKHIN 312 Query: 409 AVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE---NVQTFTRKIAMVND 465 FG + ++R + R+ + D ++++ +++ Sbjct: 313 DSFGHSVGDGLLRVVAARLKRSVRDGDTVARLGGDEFVVMLVNLATQADADVIARKILDT 372 Query: 466 FDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKL 521 F F + P G NA + + A+ + ++H + + F Sbjct: 373 FIEPFTLDEHDLHVTTSVGVSLCPTDGTNAETLLKTADAALYAAKEHGRNCYRFYTRELG 432 Query: 522 NEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFI 581 +EE + + A+ EL L YQP VD+ T I G EAL RW G+I P +FI Sbjct: 433 ARVEEQTILENALHQAVANHELELYYQPKVDLKTGQISGVEALIRWRRPGIGVIPPDRFI 492 Query: 582 TIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTI 641 IAED G I +G +++TA + + + + +N+S Q + T Sbjct: 493 PIAEDCGLILPIGEWVLRTACMQAVAWRREG--HPPIRIAVNLSARQFRQQDVAAMVRTT 550 Query: 642 MKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEIN 701 ++E GL +SL +E+TE+V+ + + +L+ GV +S+DDFGTG S+L ++ Sbjct: 551 LEETGLAPDSLELELTESVLMQDCNAIAHTLRELKALGVVLSLDDFGTGYSSLSYLKDLP 610 Query: 702 PDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQA 759 D +K+D F D+ +A + R I +A + +AEGVE+E L + C Sbjct: 611 IDVVKIDRSFLDDVTTSAEGASLTRSIIAMAESLHMETVAEGVETEAQLSFLNRHRCHAM 670 Query: 760 QGYLYQKPMPFSAWDKSG 777 QGY + P+ Sbjct: 671 QGYYFSHPVTGDEIADML 688 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 117/536 (21%), Positives = 211/536 (39%), Gaps = 27/536 (5%) Query: 256 IEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSE 315 K + + N F Y ++ + +L L T + E Sbjct: 313 DAKRNILRINDAFSTITGYQADEIVGQNPRL--LKSGVHSPAFYAEIWKTIDQYGNWQGE 370 Query: 316 MTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQ 375 +T + + + I +L+ G A I I + ++E + A + ++ L SYD Sbjct: 371 ITNRHKDGSLVTEWL-SISSLRDTTGTASHYIGIFSDLSERQAA----AERIQYLSSYDT 425 Query: 376 ESGFIKNMAIIESNNNQYL---------AVGIIKLCGLEAVEAVFGVDERNKIVRKLCQR 426 + + N L A+ ++ L + G ++I+ ++ +R Sbjct: 426 LTELPNRHLFDDRLNQALLTARRFERGTALILLDLNRFRLINDTLGPPAGDEILVEVTRR 485 Query: 427 IAEKYAQCCDIVTFNADLYLLL---CRENVQTFTRKIAMVNDFDSSFGYRNLRI----HK 479 + + + + + + + M++ F + Sbjct: 486 LKLQVREGDTVGRRAGNEFGFVMANLSHERDALALAQRMLDAISVPFSVAGQSVAITASI 545 Query: 480 SAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAME 539 P GEN + A+ + + F F + + I +R A+ Sbjct: 546 GISVFPKNGENGEAMLRSADAALLRAKQSGRNTFSFYSPEMDADAARRLSIESALRDALA 605 Query: 540 IGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIK 599 E + YQP V +++ ++G EAL RW SA G ISP++FI IAE+ G I ++G +++ Sbjct: 606 RDEFCVHYQPQVSLDSGHMIGMEALLRWNSALLGPISPVEFIPIAEETGLIMQIGDWVLR 665 Query: 600 TAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITET 659 TA + + + L + +N+SP Q + + + E+GL A +L +EITE+ Sbjct: 666 TACHQTKAWLDLGLL--PLHVAVNLSPRQFRQADLPAQVAHALAESGLPAGALELEITES 723 Query: 660 VIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA 719 + +L+ G+++S+DDFGTG S+L D IK+D F DI Sbjct: 724 AFIDDIDDAVAMCSKLKSLGIKLSLDDFGTGYSSLAYVSRFPFDKIKIDQSFVRDIVNNP 783 Query: 720 --GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 I + R + V+AEGVE+E A L C QGYL+ +P+P + Sbjct: 784 VNAAIASAAIVMGRSLNLSVLAEGVETEAQAAFLRSRRCDAIQGYLFSRPLPPEEF 839 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 123/582 (21%), Positives = 233/582 (40%), Gaps = 29/582 (4%) Query: 214 DEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFY 273 + + + I++ + A E++ + + + T+ + +V N F Sbjct: 357 GRINAVWRMVRDISEKRAAEERVQLAAKVFENTVEGIMITDADRRIRSV--NRAFTEITG 414 Query: 274 YPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQI 333 Y +L K L + E+ P+ I Sbjct: 415 YTQHEVLGQ--KTSILSSGRHDEPFYEQMWQSIAEHGSWQGELWNRRKNGEVYPEWL-AI 471 Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES----- 388 A++ G+ ++I + + E K A ++ L +D + + + + Sbjct: 472 NAVRNSLGEITHYVAIFSDLTERKAA----DERIQFLAHFDVLTSLPNRIHMQDRVELAI 527 Query: 389 ----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 +NQ LA+ ++ L + V G + +++ RI A + D Sbjct: 528 HNAVRDNQRLALLLLDLDRFKTVNESLGHSAGDTLLQVAADRIKSVMAPGEMLARQGGDE 587 Query: 445 YLLLCR---ENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEK 497 +++L + + + + F + N + P G + + Sbjct: 588 FIILLPVISDPGEAALAAERVRDVFANPIELHNHVLTITPSIGISVYPDDGRDYETLVRN 647 Query: 498 LKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRA 557 A+ + + + F E + I +R A+E E L YQP V++ + Sbjct: 648 ADAAMYHAKSSGRNSYKFYTADLNARAREILAIESQLRFALERDEFVLHYQPQVEMESGR 707 Query: 558 ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD 617 I+GAEAL RW G++ P++FI +AE+ GFI ++G +I A + + + + Sbjct: 708 IVGAEALIRWNHPSLGLLGPVRFIQVAEERGFIVQIGNWVIAEATRQLVEWRRAGL--PE 765 Query: 618 FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK 677 L IN+S Q +P + ++ +GL ++L +E+TE++I + I+ ++ Sbjct: 766 LTLAINLSALQFRQPDLALQVKQALESSGLPGHALDIEVTESIIMEDAQATIQTIDNMKN 825 Query: 678 QGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNRI 735 G+R+SIDDFGTG S+L D +K+D F DI I R I ++A+ + Sbjct: 826 MGLRLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPQDADDSAIARAIINMAKNLNM 885 Query: 736 PVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 V+AEGVE+ + + L + GC QGYL KP+P + + Sbjct: 886 QVVAEGVETMEQWQFLEQEGCDFVQGYLIAKPLPADDFAELL 927 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 110/487 (22%), Positives = 197/487 (40%), Gaps = 28/487 (5%) Query: 309 FRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLL 368 E+T+L L L+ I++I ++ E K AE K+ Sbjct: 560 HSEWNGEITQLRKDGTALV-VEAHWTLLRDENDQPDAILAINTNVTERKAAEH----KVH 614 Query: 369 SLISYDQESGFIKNMAIIES-------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVR 421 L YD +G + + + Q A+ +I L + + G + +++ Sbjct: 615 QLAFYDPLTGLPNRELLGDRLQHAMQVRHGQVGALLLIDLDNFKTLNDTLGHAMGDLLLQ 674 Query: 422 KLCQRIAEKYAQCCDIVTFNADLYLLLC------RENVQTFTRKI--AMVNDFDSSFGYR 473 ++ QR+ + + D ++++ + + ++ ++ F F Sbjct: 675 QIAQRLQTCLRKGDTLARVGGDEFVIVLEGLSASPGDAGSLATRVGEKILASFARPFQLA 734 Query: 474 NL----RIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIW 529 + + ++ LA+ + H + F D A + Sbjct: 735 DYVHHCTASIGITLFNDRPTTLDELRKRADLAMYQAKAHGRNALRFFDPAMQAVVAARAE 794 Query: 530 IARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGF 589 + ++R A+ +G L YQ VD + GAEAL RW +RG I+P FI +AE+ G Sbjct: 795 LEVDLREALRLGAFELHYQAQVDAR-GCVSGAEALLRWQHPQRGWIAPASFIPLAEETGL 853 Query: 590 INELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKA 649 I LG ++ A + +S+ L +NVS Q + F + ++ +G Sbjct: 854 ILPLGLWVLDVACAQLVAWSKM-PHMARLSLAVNVSARQFRQADFAAQVLAAIERSGADP 912 Query: 650 NSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDS 709 L +E+TE+++ + L + L+ G+ S+DDFGTG S+L + D IK+D Sbjct: 913 RRLKLELTESLMLDNLDDTILKMSALKAHGIGFSLDDFGTGYSSLAYLKRLPLDEIKIDQ 972 Query: 710 QFTGD--IFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKP 767 F D I I R I L + + V+AEGVE++ L + GC QGYL+ +P Sbjct: 973 SFVRDVLIDANDASIARSILALGQSLNLEVVAEGVETDAQHAFLAEHGCQAYQGYLFNRP 1032 Query: 768 MPFSAWD 774 P ++ Sbjct: 1033 QPARQFE 1039 >UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=uncultured bacterium 9F08 RepID=D2XIQ4_9BACT Length = 965 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 107/533 (20%), Positives = 198/533 (37%), Gaps = 26/533 (4%) Query: 264 NNALFEIYFYYPGGNLLNA-SDKLFYLPF-AFIIIVLLVVYLMTTRVFRRQFSEMTELVN 321 +N F Y L L +L R + S L + Sbjct: 298 SNPAATALFGYSAEELQGEDLHALIHLCKEGEAHPREECGLWRLLRFGGQYHSGHETLRH 357 Query: 322 TLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIK 381 A+ +G + I+E E +L YD+ +G Sbjct: 358 KDGTPLPVEMNGSAIDDEKGVVIGAVLTFRDISERLSYE----QELERRAHYDELTGLAN 413 Query: 382 NMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYA 432 + + + + +AV + L + V G D ++++ + QR+ Sbjct: 414 RVLLKARLQQTTAQAHRHGKSVAVLFLDLDHFKIVNDGLGHDCGDRLLVAIAQRLQTVVR 473 Query: 433 QCCDIVTFNADLYLLLC--RENVQTFTR-KIAMVNDFDSSFGYRNLRI----HKSAICEP 485 + + D ++++ +N + ++ + P Sbjct: 474 EADTVARHGGDEFVIVLSEPDNGEDAAEIGRRLLQRIAEPVWIDEHELYTTASVGVSLFP 533 Query: 486 LQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFL 545 G + + A+ + + F + + + + + +R A+E EL L Sbjct: 534 RDGTDVDTLLRNADAAMYRAKHLGRNNLQFYSEEMNLSLSKRLRMLSQLRQAVERNELCL 593 Query: 546 VYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEF 605 YQP + +LG EAL RW E G++SP +FI +AE+ G I +G +++ A + Sbjct: 594 HYQPQASLPGGRLLGVEALVRWQHPELGMVSPAEFIPLAEESGLIEPIGEWVLREACRQG 653 Query: 606 RHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERIN 665 + + + + +N+S Q + P + ++++ GL L +E+TET + Sbjct: 654 VAWDRAGFM--PLRISVNLSARQFDNPKLDDTIRDVLEQTGLAPERLELELTETALIANP 711 Query: 666 EHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIV 723 + + +R GVR+++DDFGTG S+L D IK+D F D IV Sbjct: 712 QQSVQRLSAIRDLGVRLALDDFGTGYSSLAYLQRYTFDLIKIDRSFVADAIRNPGNAAIV 771 Query: 724 RIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKS 776 R + +AR IAEG E+ + L + GC QGY +P+P ++ Sbjct: 772 RTVIAMARLLGSETIAEGAETAETITFLGRNGCDAVQGYYISRPLPAGEIEQL 824 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 103/438 (23%), Positives = 195/438 (44%), Gaps = 24/438 (5%) Query: 355 EMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLE 405 E K+AE +++ + ++D +G + + + +AV I L + Sbjct: 440 EGKEAEK----RIIEMATHDALTGLPNRYLLRDRIEQVLVHDTRLQRQMAVLFIDLDHFK 495 Query: 406 AVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR---ENVQTFTRKIAM 462 + G + + +++ + R+ + D ++++ E++ + Sbjct: 496 TINDSLGHEIGDLLLKAVADRLKSCVRNEDTVARQGGDEFIVVLNSIAESLDAAKVAQKI 555 Query: 463 VNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDD 518 ++ F F + P G NA + + +A+ + + + + F D Sbjct: 556 LDSFALPFHIHKNELHIDGSIGIAVFPDDGVNAETLLKNSDVAMYHAKKNGRNNYQFFTD 615 Query: 519 AKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPL 578 E + ++R+A+E EL L YQP++D+ + + G EAL RW E+ +I+P Sbjct: 616 ELNKSAYERHILGLDLRYALERNELLLYYQPVMDMPSHNLYGVEALLRWRHPEQKLITPD 675 Query: 579 KFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERF 638 KFI +AE+ G I +G +I+T + + + ++ + IN+S Q + + Sbjct: 676 KFINLAEETGLIIPIGEWVIRTVCLQIKAWQEQGFYVP--RVAINLSARQFRDKDLIKNI 733 Query: 639 TTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFY 698 + I+ E G+KA + +EITE+++ E + +L G+ ISIDDFGTG S+L Sbjct: 734 SRILSETGVKAKHIALEITESMLIDNIEKVVETLNRLDAMGLHISIDDFGTGYSSLSYLK 793 Query: 699 EINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGC 756 + ++K+D F D+ IV I +A + VIAEG+E E+ L+ C Sbjct: 794 QFPIHTLKIDRSFVRDLVTDKNDRTIVAAIIAMAHSLEMEVIAEGIEIEEQLDFLVTQKC 853 Query: 757 VQAQGYLYQKPMPFSAWD 774 QGY + KP+ S + Sbjct: 854 NHYQGYYFSKPVTVSEIE 871 >UniRef50_B9M6C9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M6C9_GEOSF Length = 845 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 108/473 (22%), Positives = 202/473 (42%), Gaps = 25/473 (5%) Query: 323 LAFLPDSTDQIEAL-KIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIK 381 + +I + + + I I + E K E +++ ++D +G Sbjct: 377 TKWGYSLNVEISSSPFVERNNVMGSIHIVRDVTESKKME----DEIRYQATHDILTGLAN 432 Query: 382 NMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYA 432 M ++ N+ AV + L +++ G +K+++ + R+ E Sbjct: 433 RMLFMDHLALSISQGHRYNEIQAVMFLDLDRFKSINDSLGHAAGDKLLQLISGRLKECVR 492 Query: 433 QCCDIVTFNADLYLLLCRENV---QTFTRKIAMVNDFDSSFGYRNLR----IHKSAICEP 485 + + D Y +L + +++ + F + I P Sbjct: 493 ETDTVARIGGDEYNILITQMAHPEDATAIANKILSSMNKPFAIDGHQLHVTISIGISLYP 552 Query: 486 LQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFL 545 GE+A + + +A+ ++ + + F + A E + + +R A+E EL + Sbjct: 553 TDGEDAETLLKNADIALYHAKEQGRNNYQFYNPALNTRTLERVKMENRLRQALERHELVV 612 Query: 546 VYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEF 605 +YQP V ++T + GAEAL W+ E G++SP FI +AE+IGFI ++ +++TA + Sbjct: 613 LYQPQVAMDTGQVTGAEALVYWLHPELGLLSPGHFIPMAEEIGFITDIDEWVLETACAQN 672 Query: 606 RHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERIN 665 + + F + +N+S Q P ++ ++ GL L +EITE + Sbjct: 673 KAWQDEGY--RSFNVTVNMSSKQFRRPDLVDQVRRVLNATGLPPRFLELEITEGTAMKDI 730 Query: 666 EHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIV 723 E+ ++ L V +IDDFGTG S+L ++ +K+D F + IV Sbjct: 731 EYTIPSLNTLTGMEVGFAIDDFGTGYSSLSCLKKLPIRKLKIDKSFIFGVNTDPNDKAIV 790 Query: 724 RIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKS 776 I +A ++ VIAEGVE D L + C Q QG+LY +P+P + + Sbjct: 791 ATIIAMAHNLKLEVIAEGVEDADQLEFLHQNHCDQMQGFLYSRPIPAEDFRRL 843 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 98/490 (20%), Positives = 197/490 (40%), Gaps = 51/490 (10%) Query: 334 EALKIREGDAKEIISIK---------------------------NSIAEMKDAEIERSNK 366 ++ G+ ++S+ I+E + + + Sbjct: 398 TPIRDHNGEVLGVLSVLSRGKIKSLERAKDVLAIMAARVSAEIEREISEQRL--RDNEDH 455 Query: 367 LLSLISYDQESGFIKNMAIIESNNN---------QYLAVGIIKLCGLEAVEAVFGVDERN 417 L L+ +D + + + + V I L + + G + + Sbjct: 456 LEYLVYHDVLTDLPNRQLFRDRLQHAISMASLGQHQVGVLFIDLDHFKKINDSLGHEVGD 515 Query: 418 KIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVND----FDSSFGYR 473 +++ ++ +R+ + + D + ++ + + I + + Sbjct: 516 RLLCEVARRLRLCIGGLDTVARLSGDEFAIIL-DQLNNIENVILIAQEVNRRLAEMMVVE 574 Query: 474 NLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIW 529 ++ P G++ S + A+ ++ + F E + Sbjct: 575 GYKLFLTASIGISLYPGDGKDVVSLLKCADAAMFKAKELGRDNYRFYTAGLNERASELLA 634 Query: 530 IARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGF 589 + +R A++ L + +QP V++ +R I+GAEAL RW E G+ISP+ FI +AE+ G Sbjct: 635 LEGALRQAVDKNHLVVYFQPQVELASRRIIGAEALVRWQHPENGMISPVDFIPMAEETGL 694 Query: 590 INELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKA 649 I +G +++ + + R + + +N+S Q + I++E GL Sbjct: 695 IVSIGEWVLRQSCLQARQWQVAGY--PPMRISVNMSARQFRQKDLVPMVRRILQETGLSP 752 Query: 650 NSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDS 709 L +EITE+++ + + +L G+++SIDDFGTG S+L + +K+D Sbjct: 753 EYLDLEITESILMNDVDGAVERLVELHSLGIQLSIDDFGTGYSSLAYLKKFPIQYLKIDR 812 Query: 710 QFTGD--IFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKP 767 F D I I + DLAR + VIAEG+E +D + L+ GC QGYL+ +P Sbjct: 813 SFVRDVIIDPNDAAIATAVIDLARNMNLNVIAEGIEQQDQHQFLLDRGCGYGQGYLFSRP 872 Query: 768 MPFSAWDKSG 777 +P +++ Sbjct: 873 IPAHEFEQLL 882 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 110/590 (18%), Positives = 214/590 (36%), Gaps = 34/590 (5%) Query: 206 YLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNN 265 + DQ + + + + + + S Y + + + N Sbjct: 174 FYDQHGTWQGYRGIDRDITV-----RQQLEEWLRQSAMVYENMWEGAVITDPAGTILDVN 228 Query: 266 ALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAF 325 F Y ++ + ++ L + E+ Sbjct: 229 PAFSRITGYAKDEVIGKNPRI--LKSDRHEQAFYQHMWRELIEKGQWRGEIWNRRKNGEV 286 Query: 326 LPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI 385 P+ I + G + + ++++K +E KL SL YD + + + Sbjct: 287 YPEWL-SISGVSDARGQTSYYVGVFTDLSQLKQSEA----KLESLAYYDPLTALPNRLLL 341 Query: 386 IES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCD 436 + + V I L V ++++ + +R Sbjct: 342 HSRLEHALEWAERHQTKVGVYFIDLDQFRVVNESLSYQAGDQLLVMVSKRFLSCLRVDDT 401 Query: 437 IVTFNADLYLLL---CRENVQTFTRKIAMVNDFDSSFGYRN-LRI----HKSAICEPLQG 488 + D ++L+ + + ++ D F I P G Sbjct: 402 LARPGGDEFVLIQEALADPQEATETARELLASLDQPFQLDGGQEIYLGASIGITVFPGDG 461 Query: 489 ENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQ 548 + + A+ +++ + F F + + + + +R A+E EL L YQ Sbjct: 462 TTPPDLLKNAEAAMYHAKENGRNRFSFYAEQMNADALARLQMEMALRQAVENRELLLYYQ 521 Query: 549 PIVDINTR-AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRH 607 P + +++GAEAL RW + E +I+P +FI +AE G I +G +I A + R Sbjct: 522 PQWQLADSPSVIGAEALIRWRNKEGELIAPDQFIPLAEKSGLIGAIGDWVIDEACRQLRI 581 Query: 608 FSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEH 667 + + K + +NVS Q + E ++++ + A+ +E+TE+++ E Sbjct: 582 WRDQG--KKQLRVAVNVSARQFRAGNLAEVVAQALRKHEIPAHCFELELTESILMEKPEE 639 Query: 668 FYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRI 725 + + GV I++DDFGTG S+L +K+D F D+ + I Sbjct: 640 AAELLNRCAALGVGIALDDFGTGYSSLAYLSRFPITVLKIDRSFVRDLNHRSEAALIADS 699 Query: 726 IFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 I LA + V+AEGVE+E+ L GC AQG+L+ P+P + + Sbjct: 700 IIALAHRMGLQVVAEGVETEEQRAYLQSRGCDLAQGFLFSPPLPAEQFAE 749 >UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K210_DESAC Length = 920 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 106/463 (22%), Positives = 199/463 (42%), Gaps = 23/463 (4%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--- 388 +I A I + +I I+E K AE ++L+ +D +G + I + Sbjct: 457 EINARWIDLDRGHLVQAIIRDISERKAAE----DQLVHQAYHDPLTGLPNRLLISDRLKL 512 Query: 389 ------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNA 442 + + ++ L + + G ++I+ L QR+ E + F Sbjct: 513 AIAKARRHKTQAVLLLLDLDRFKNINDTLGHAVGDRILTTLAQRMQETLRDTDTVARFGG 572 Query: 443 DLYLLLCREN---VQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYA 495 D +L+L + + + + + P Sbjct: 573 DEFLVLLEDIRELSDVVSLAQKLSDLVSQPVLIDGEEMCLTTSVGISVAPEDSIEVDQLI 632 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 A+ ++ + F F + + N+R A++ E+ + YQP V++++ Sbjct: 633 RFADTAMYRAKEKGRNNFQFYTPDMNAHAGRRLQLENNLRKALQRQEMVVYYQPQVEMDS 692 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 I+G+EAL RW+ E G+ISP FI +AE+ G I E+G ++ A + + + Sbjct: 693 GRIIGSEALLRWMHPEHGLISPNDFIPLAEETGVIEEIGAWALEQACQQTVAWQKN---H 749 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 + + +N+S Q + + I+ + GL A L +E+TE+++ + + +L Sbjct: 750 PELKIAVNLSARQFRNENLVDDIEQILNKTGLAARHLEMELTESLLMEDVDVAIDLMNRL 809 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRI 735 K G+ ++IDDFGTG S+L D +K+D F + I R I L R + Sbjct: 810 TKLGITLAIDDFGTGYSSLSHLNRFPIDKLKIDRSFVNSMSLDNNGIARTIITLGRTLGL 869 Query: 736 PVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 +IAEGVE+ + + L++LGC QAQGY + +P+ +A+ + + Sbjct: 870 SIIAEGVENNEQRQLLLQLGCPQAQGYYFSRPVHDNAFSEMLE 912 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 688 bits (1776), Expect = 0.0, Method: Composition-based stats. Identities = 100/472 (21%), Positives = 204/472 (43%), Gaps = 24/472 (5%) Query: 320 VNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGF 379 + + + + + ++E+K+A + K+ + YD +G Sbjct: 159 RRRDGYDFWWAVTVSTVCDSDNTVTNYVISGVDVSELKEA----NRKMQQMALYDSLTGL 214 Query: 380 IKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEK 430 ++ + + +A+ + L + + G D + +++ + QR+ Sbjct: 215 ANRRLFVDRLEQAVKAASRDRKQIALLFLDLDQFKRINDTLGHDAGDSLLQTVAQRLKNC 274 Query: 431 YAQCCDIVTFNADLYLLLCRENVQTFTR---KIAMVNDFDSSFGYRNLRI----HKSAIC 483 + D + +L + V TF+ ++ + + Sbjct: 275 VRAKDTVARLGGDEFTVLLTDIVDTFSVTPVATQILKALKEPIKLKKHEVIVSTSIGVTL 334 Query: 484 EPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGEL 543 P G NA + LA+ ++H + F + + + + + +RHA++ E Sbjct: 335 APTDGANADVLMKNADLALYRAKEHGRDRYHFYTEELNAHALKQLLMEQELRHALQFEEF 394 Query: 544 FLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMG 603 L +QP V++ T I+ EAL RW +G++ P FI++AE+ G IN +G ++K A Sbjct: 395 TLGFQPQVNLTTGKIVSVEALIRWHHPSKGLVMPDSFISVAEETGLINPIGRWVLKNACM 454 Query: 604 EFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIER 663 + + + +N+S Q ++P + + E GL+ L +E+TE+++ Sbjct: 455 QMKMLQD--LTGSAIKIAVNLSARQFDDPKLEQSIEEALNETGLEPEWLELEVTESMLMG 512 Query: 664 INEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--K 721 + +++LR+ GV ++IDDFG+G S+L ++ +++KVD +F DI + + Sbjct: 513 DIQAVTNKLKRLRQTGVSLAIDDFGSGYSSLSYLKKLPVNALKVDREFVRDIPEDSNDME 572 Query: 722 IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 I I +A ++ V+AEGVE+ + L+ C AQGY + KP+ F Sbjct: 573 ITSAIIAVAHKLQLKVVAEGVETAEQKEYLLANQCDFAQGYFFSKPLSFEDL 624 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 687 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 114/586 (19%), Positives = 215/586 (36%), Gaps = 50/586 (8%) Query: 221 QGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLL 280 + E + + + I+ N+ Y D +E V G+LL Sbjct: 254 KNAEHALRESESLMRAIVDNTPVEYWARDLEGRCIMENALVVE-----------HWGSLL 302 Query: 281 NASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIRE 340 + L V RV+ + E + + +K+ + Sbjct: 303 GKRPED----SGVSPDELAVWQENNRRVYEGEVIEAEVEYQVGGQTRIFNNVVAPIKV-D 357 Query: 341 GDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNN 391 G I+ I + K E ++ L YD + + + Sbjct: 358 GQTIGIVGFNQDITDRKRNE----EEIHRLAFYDSLTHLPNRRLMFDRLEHALIGSARRK 413 Query: 392 QYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE 451 + A+ +I L + + G + ++++ ++ +R+ Q D ++++ + Sbjct: 414 SHGALLLIDLDNFKFLNDTHGHEVGDELLLEVAKRLKTCIRQGDTAARLGGDEFVVILED 473 Query: 452 -------NVQTFTRKIAMVNDFDSSFGY----RNLRI------HKSAICEPLQGENAWSY 494 +Q + + F L I A Sbjct: 474 IDGAGNGTIQAELIAGHIQAQLNHPFSLVRPPERLSIDYRCASSIGIALFDDTMVTAKEL 533 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 + A+ + + F D + + +R A++ + L +Q +D Sbjct: 534 LRRADTAMYQAKAAGRNTLRFFDPEMQAAVTHRAALETELRKAIDEQQFHLCFQVQMD-Q 592 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 + G EAL RW RG I P FI +AE+ G I +G ++ TA + +SQ+ Sbjct: 593 SGRPTGGEALLRWEHPTRGTIPPASFIPLAEETGLIVPIGQWVLATACRQLAAWSQQ-PE 651 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 L +NVS Q + F ++ ++ + G A L +E+TE+++ E + + Sbjct: 652 TSGLTLAVNVSARQFRQARFTDQLRDLLLQTGAPATRLKLELTESMMLEDTEAIIGRMAE 711 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARY 732 L++ G+R S+DDFGTG S+L + + +K+D F D+ I I L Sbjct: 712 LKQLGIRFSLDDFGTGYSSLAYLKRLPLNQLKIDQSFVRDVLTDPNDAAIAETIVALGNI 771 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 + VIAEGVE++ R L +GC QGYL+ +P+P +++ + Sbjct: 772 LGLEVIAEGVETDAQWRFLANVGCKNYQGYLFGRPLPLLEFEQFLQ 817 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 130/541 (24%), Positives = 223/541 (41%), Gaps = 31/541 (5%) Query: 261 AVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELV 320 V N FE F Y ++ + F +P ++ + E Sbjct: 295 IVDANKAFEALFGYRTADIQGFGMRAFIVP--EHLLSECENMRCAVLAGKPVVRETVRRH 352 Query: 321 NTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI 380 +P S ++I G+ + I+ I I+E K E ++ +D +G Sbjct: 353 CDGRLIPVSMIGF-PIEIA-GETQGIVYIYQDISERKAFE----EQITHQAFHDALTGLP 406 Query: 381 KNMAIIES----------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEK 430 + + AV +I L + V G ++++ ++ +R++ Sbjct: 407 NRSLFADRLERALTRARRRGDSQYAVLMIDLNKFKGVNDTLGHQAGDQLLVEVARRLSGC 466 Query: 431 YAQCCDIVTFNADLYLLLCRE---NVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAIC 483 + D + ++ E + T + F + + Sbjct: 467 VRSMDTVARLGGDEFAVILEEFKTKKEVMTVVERIGVGLGKPFVLCGKTVTPEASIGIVL 526 Query: 484 EPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGEL 543 A +A+ ++ + D EI E I + ++R A+E GEL Sbjct: 527 HTRDYAAADDLLRDADIAMYRAKEQGRASM-IFDRKMHQEILEAISLETDLRQALEAGEL 585 Query: 544 FLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMG 603 L YQPIVD+ I+G EAL RW +RG++ P +FI +AE+ G I LG +I A Sbjct: 586 LLHYQPIVDVKDSRIVGFEALVRWDHPDRGLVPPGQFIPLAEETGLILPLGRFVIDEACR 645 Query: 604 EFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIER 663 + R + D + +NVS Q + E ++ GL L +EITE+V+ Sbjct: 646 QLRAWQLEMPEAADLSVSVNVSCRQFVKDGLVEHVAQVLAATGLPPACLKLEITESVLMH 705 Query: 664 INEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT--GDIFGTAGK 721 EH + +L+ GV+I+IDDFGTG S+L ++ D +K+D F G + + Sbjct: 706 DAEHTARELNRLKALGVKIAIDDFGTGYSSLSYLRQLPIDHLKIDRSFISGQGCDGESQE 765 Query: 722 IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVK 781 IV+ I LAR + VIAEGVE D L C +AQG+++ +P+ +A +G+L++ Sbjct: 766 IVKSIISLARSLGLTVIAEGVECPDQLDRLRLADCDKAQGFMFSRPVEATA---AGRLIR 822 Query: 782 E 782 + Sbjct: 823 Q 823 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 138/778 (17%), Positives = 281/778 (36%), Gaps = 55/778 (7%) Query: 36 SERAVKRADSRFELIQKNVGYFFKDIERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFL 95 E AV+ Q + D + A T++ S+ + E+Q ++ L Sbjct: 91 EEVAVEALKK---GAQDYLIKGKIDGDSLARTMRYSMERKQIELELQDGKQRYKRLVEIL 147 Query: 96 DSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDD 155 + +D N Y+ F N+ + V+ G DE F++ V+ + Sbjct: 148 PDIIYRIDANGYFTFI---NEAVQVF------GYEPDELIGKHFSELIHPDDLKKVSRSE 198 Query: 156 SNNSWNPAYNCFD---------RPGKKCISFTLHINGKDHDLLAVDKIHVDLNWRYLNEY 206 + ++ + + R G++ + ++ + W +E Sbjct: 199 VLSEYSGKTSDYKTTPKLFDERRTGQRKTTGLQIRVKSKKSPEYMEYTIQIIKWPKKHEK 258 Query: 207 LDQISANDEVLF-LKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPN- 264 + +++A + + + + S+ E AV + Sbjct: 259 IIEVAATGHYDSDIMKNDKRFVGTVGVIRDITGSKHAEEMICTLSLAVEQSPAMIAVTDT 318 Query: 265 -------NALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMT 317 N F + +L + + + + + L + ++ E Sbjct: 319 DGRIDYINPKFCKVTGFEPEEVLG-KNLIDIIQPGGESLSMADKTLWKAITSKGEWKEAF 377 Query: 318 ELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQES 377 L ++ + A+K EG ++I I E K AE ++ L YD + Sbjct: 378 SSRKKHGELFWTSLSLSAIKSNEGFISHYLAIMEDITEHKQAE----ERIHYLAYYDSLT 433 Query: 378 GFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIA 428 + Q LAV I + + V G +++++ + R+ Sbjct: 434 ALPNRELFHDRLNMAIIHAHRKQQMLAVAFIDIDRFKKVNDTLGHSTGDRLLKIIADRLK 493 Query: 429 EKYAQCCDIVTFNADLYLLLCRENV---QTFTRKIAMVNDFDSSFGYRNLRI----HKSA 481 + + D ++LL E ++ + + Sbjct: 494 SCIREEDTVSRQGGDEFVLLLTEISRMEDANDVTQRILKKLKEPVIIDDHDLCISASIGI 553 Query: 482 ICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIG 541 P G A + + A+ ++ + F + E + +R A+E Sbjct: 554 ALYPGDGTTAEALLKNADSAMYISKESGRDNYHFYSSTVQEKAYEQLLEEMYLRRALENR 613 Query: 542 ELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTA 601 EL L YQP V+I T ++G EAL RW ++G+ISP +FI +AED G I + + ++ TA Sbjct: 614 ELVLYYQPQVNIATGRLVGMEALLRWKHPKKGLISPAEFIPLAEDTGQIVPIDFWVLHTA 673 Query: 602 MGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVI 661 + + + + +N+S + + ++ + + ++L +EITE + Sbjct: 674 CKQNMAWQRAGL--PSVPIAVNISGHTFGRENLIDFVNNVLHDTRMSPDALDLEITEGIA 731 Query: 662 ERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA-- 719 + + + +L+ G++I+IDDFGTG S+L + +K+ F ++ Sbjct: 732 IQNLQTTIYKLNKLKSLGIQITIDDFGTGFSSLSYLSKFPIQKLKIGMTFIHNLHKDPTN 791 Query: 720 GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 IV+ + +A+ ++ VIAEGVE+++ L L C + QGYL K + + Sbjct: 792 SAIVKAVIAMAKSLQLTVIAEGVETDEQFEFLQGLQCDEFQGYLCSKAVTSEEMGRFL 849 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 117/574 (20%), Positives = 221/574 (38%), Gaps = 33/574 (5%) Query: 229 NQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFY 288 +R + + + + + N +FE + P ++ +D Sbjct: 284 EAESRLRESESRLARVVSAMPDMVFLKDADGVYLSVNPVFERFIGRPEHQIVGRNDFDLT 343 Query: 289 LPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQI-EALKIREGDAKEII 347 P M T R+ L + I ++ G ++ Sbjct: 344 TPAQARQFRQNDQRAMQT---RQPLVYEETLTFAEDGYQGRFETIKTPIRDLHGRVTGVL 400 Query: 348 SIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE---------SNNNQYLAVGI 398 + I E K A + ++ L YD +G +++ ++ A+ Sbjct: 401 GVCRDITERKRA----AQEIERLAFYDALTGLPNRRLLLDRLQRSIATCQRTHKLGALLF 456 Query: 399 IKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC----RENVQ 454 I L + + G D ++++ ++ R+ + F D ++++ + Sbjct: 457 IDLDNFKDLNDTLGHDMGDQLLAQVATRLVASVRAADTVARFGGDEFVVMLEALAPDLRT 516 Query: 455 TFTRKI----AMVNDFDSSFGYRN----LRIHKSAICEPLQGENAWSYAEKLKLAISSIR 506 + ++ + F + Q + ++ LA+ + Sbjct: 517 ATAQAEMVADKLLASLNQPFALDGGQHYSTLSIGVTLFGEQRLSVDELLKRADLALYQAK 576 Query: 507 DHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCR 566 + F D + + ++R + EL + YQP+VD + ++GAEAL R Sbjct: 577 AAGRNTQRFFDPDMQAAVNARSNLEADLRQGLARAELLVYYQPVVD-HQARLMGAEALVR 635 Query: 567 WVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSP 626 W +RG+I P FI +AE G I LG +++TA + + +SQ + +NVS Sbjct: 636 WRHPQRGMIGPADFIPLAEQTGLILPLGQYVLQTACAQLQRWSQH-PDTAGLSISVNVSA 694 Query: 627 WQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDD 686 Q +P F + +K +G L +E+TE+++ E + QL+ +GV ++DD Sbjct: 695 RQFRQPGFVAQVLHQLKSHGADPRRLKLELTESLLLGDIEDTIARMAQLKSEGVGFALDD 754 Query: 687 FGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVES 744 FGTG S+L + D IK+D F ++ IVR I LA+ + V+AEGVE+ Sbjct: 755 FGTGYSSLSYLKRLPLDQIKIDQSFVREVLADPNDAAIVRTILALAKSLDLQVVAEGVET 814 Query: 745 EDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 L GC QGYL+ +P+P + + + Sbjct: 815 TGQLSFLQLHGCEGFQGYLFGRPVPMEVFACAHR 848 >UniRef50_B0C8A1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C8A1_ACAM1 Length = 1015 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 108/525 (20%), Positives = 211/525 (40%), Gaps = 22/525 (4%) Query: 271 YFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDST 330 Y LL + + + L + T ++ ++ + L Sbjct: 209 LTGYAPEELLGTFNLTYNTLIDPDDLPQLTAAITTAIATQQVYTVEYRIRTKSGQLKWFL 268 Query: 331 DQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES-- 388 +Q + ++G A + I+++K AE +L YD+ +G ++ Sbjct: 269 EQGNGIFDKQGQALGLEGFITDISKLKQAET----QLRHDAFYDKLTGLPNRSLFMDRLE 324 Query: 389 -------NN-NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTF 440 + +Q AV + L + V G ++++ ++ +R+ + + Sbjct: 325 YCIKRVKRHPDQIFAVLFLDLDRFKVVNDSLGHAAGDQLLVEIAERLTACVRESDTLARL 384 Query: 441 NADLYLLLCR---ENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWS 493 D + +L + + + F + + ++ Sbjct: 385 GGDEFTVLLEGIKDLSDALLVCGRIQQSLNCPFNLNGREVLITVSTGVALSTMGYDDPEQ 444 Query: 494 YAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDI 553 A+ + +++ + + + ++R A+E E L YQPI + Sbjct: 445 LLHNADAAMYRAKALGKAQWEVFTADMHSNASAQLQLEVDLRRAIERQEFQLHYQPIFHL 504 Query: 554 NTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRAS 613 T AI+G EAL RW RG+ISP++FI +AE+ G I + + +++ A + + + Sbjct: 505 ETAAIVGFEALLRWHHPLRGLISPVEFIPVAEETGLILPISWWVLQEACRQLSRWQTQFP 564 Query: 614 LKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIE 673 L+ + +N S Q +E + I+ GL SL +EITE+ I E + Sbjct: 565 LEVPLFVSVNFSSKQFSEVGLIPQIEDILHTTGLAPQSLKLEITESAIMENAEATAAKLL 624 Query: 674 QLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF-GTAGKIVRIIFDLARY 732 +++ G+++ IDDFGTG S+L + D +KVD F + +IV I L++ Sbjct: 625 EIKALGIQLGIDDFGTGYSSLSYLHRFPVDILKVDRSFVSAMDSHENLQIVHTITMLSQN 684 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 + +AEGVE+ + A +L + C AQGY + KP+ S+ + Sbjct: 685 LGMRAVAEGVETAEQAAQLRAMNCQYAQGYFFSKPIDASSMEHLL 729 >UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Caulobacteraceae RepID=B8H3B9_CAUCN Length = 748 Score = 687 bits (1773), Expect = 0.0, Method: Composition-based stats. Identities = 118/485 (24%), Positives = 205/485 (42%), Gaps = 29/485 (5%) Query: 311 RQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSL 370 R E T +I AL EG A+ ++ + IAE K AE ++ L Sbjct: 224 RVIEEDHVPRKDGGMAILRTKKI-ALLNAEGRAEYLLGVSEDIAERKRAEA----QIARL 278 Query: 371 ISYDQESGFIKNMAI-------IESNN--NQYLAVGIIKLCGLEAVEAVFGVDERNKIVR 421 YD + + + + LAV + L + V G + +++ Sbjct: 279 AHYDPLTDLPNRVLFQKSLGEALARRSRKGDALAVHFVDLDRFKTVNDTLGHPLGDALLK 338 Query: 422 KLCQRIAEKYAQCCDIVTFNADLYLLL---CRENVQTFTRKIAMVNDFDSSFGYRNLRI- 477 +R+ + + D + ++ ++ +V + F + + Sbjct: 339 IAAERLRGCVREGDTVARLGGDEFAIVQTGLDDSNGATRLAARIVEAMAAPFDLQGHHVV 398 Query: 478 ---HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNI 534 P G++A +K +A+ + + F + A +++ + ++ Sbjct: 399 IGASVGVSLAPTDGDDADELLKKADMALYRAKADGRGAYHFFERAMDEQLQARRALELDL 458 Query: 535 RHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELG 594 R A++ GE L YQP+ + + G EAL RW ERG++SP FI +AE+IG I +LG Sbjct: 459 RRALQAGEFELFYQPLYHLGDERVTGCEALLRWRHPERGMVSPADFIPLAEEIGLIVQLG 518 Query: 595 YQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCV 654 +++ A E ++ + L +N+SP Q + + + +GL A L + Sbjct: 519 EWVLRRACAEAANW------PEHVRLAVNLSPAQFRDRGLVRTVVSALAASGLPAQRLEL 572 Query: 655 EITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD 714 EITE+V+ + ++ + L+ GVRIS+DDFGTG S+L D IK+D F D Sbjct: 573 EITESVLLQDSQANMTMLHDLKALGVRISMDDFGTGYSSLSYLRSFPFDKIKIDQTFVRD 632 Query: 715 IFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 I + I++ + DL + AEGVE++ L + GC + QGY +P P S Sbjct: 633 ILHDSDAMAIIKAVLDLGASMGVVTTAEGVETQAQLDALRQQGCAEIQGYFISRPAPASE 692 Query: 773 WDKSG 777 K Sbjct: 693 IAKML 697 >UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria RepID=Q88QU8_PSEPK Length = 1247 Score = 686 bits (1772), Expect = 0.0, Method: Composition-based stats. Identities = 134/615 (21%), Positives = 231/615 (37%), Gaps = 42/615 (6%) Query: 177 FTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKL 236 FT HI D + + L V + I + L +EKL Sbjct: 635 FTCHIRRSDGQIRLCELSARPLPI-------------TGVDCMLTIARDITERHLMQEKL 681 Query: 237 IIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIII 296 + + + T+ ++ SAV N F Y L + +L L Sbjct: 682 QLAATVFENTAEGVLITDIDQRISAV--NRAFSEITGYSEIEALGQTPRL--LASGQHDS 737 Query: 297 VLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEM 356 + E+ P I A++ + + +++ I+ + Sbjct: 738 AFYLAMWHQLTAEGHWQGEIYNKRKNGELYPSWL-TISAVRNSDREITHFVAVFADISSI 796 Query: 357 KDAEIERSNKLLSLISYDQESGFIKNMAIIESNNN---------QYLAVGIIKLCGLEAV 407 K A+ KL +D +G + AV + L + + Sbjct: 797 KHAQA----KLDYQAHHDPLTGLPNRTLFENRLQGVLTCAQVSNRQGAVLFLDLDRFKHI 852 Query: 408 EAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCREN---VQTFTRKIAMVN 464 G + +++ + QR+ E+ + D +++L T ++ Sbjct: 853 NDSLGHPVGDLLLKGIAQRLKEQVRDVDTVARLGGDEFIILLPGLHKPSDASTIANKLLA 912 Query: 465 DFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAK 520 F++ F P G + + A+ + + Sbjct: 913 CFNAPFQAGEHEFFTSASIGISLYPQDGTDVSTLIRNADAAMYRSKAKGRNRVEAYTRDL 972 Query: 521 LNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKF 580 + E I + +R A+E E+ L +QP + + T++++GAEAL RW G + P F Sbjct: 973 TAQASERIALEHELRRAVERNEMSLCFQPKLSLKTQSLVGAEALIRWSHPTFGEVPPEHF 1032 Query: 581 ITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTT 640 I +AE+ G I +LG +++ A + + + Q IN++ QL PH R Sbjct: 1033 IHLAEENGTILQLGDWVLEQACRQMQAWKQHYQPFGPL--SINLAGAQLRHPHLARRIEQ 1090 Query: 641 IMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEI 700 ++K + LKA L +EITE I E + QL+K GV+++IDDFGTG S+L + Sbjct: 1091 LLKHHQLKAGDLQLEITENFIMSQAEEALAVLYQLKKLGVQLAIDDFGTGYSSLSYLKRL 1150 Query: 701 NPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQ 758 D +K+D F + I R I L R ++ +IAEGVE++ R L GC Q Sbjct: 1151 PLDILKIDKSFIRGLPDDPHDAAIARAIIALGRSMQLTIIAEGVENQAQQRFLAAEGCEQ 1210 Query: 759 AQGYLYQKPMPFSAW 773 QGY+ P+P + Sbjct: 1211 IQGYIVSLPLPPEEF 1225 >UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47UD6_COLP3 Length = 921 Score = 686 bits (1772), Expect = 0.0, Method: Composition-based stats. Identities = 119/595 (20%), Positives = 227/595 (38%), Gaps = 48/595 (8%) Query: 222 GHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIE----KTSAVPNNALFEIYFYYPGG 277 ++I N + + ++I D E +P L+++ P Sbjct: 312 DAQLIVANMSTMPDQSSHRNTKTISVISKQDFLLGEAVNVSVFIIPKT-LWKVVVVTPQM 370 Query: 278 NLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRR-QFSEMTELVNTLAFLPDSTDQIEA- 335 +N++ K+ L +I ++++ + RR + ++VN L Q+ Sbjct: 371 VAINSASKVSNLILMLLIAIMIIAAFLGFIYCRRSLIMPIYQMVNQLQRPVTEGGQVYPE 430 Query: 336 -LKIREGDAKEIIS----------------IKNSIAEMKDAEIERSNKLLSLISYDQESG 378 L R D +++ +K I E K AE +L L +D +G Sbjct: 431 LLDDRRQDEFGLLAYHFNQSKMALDSNNRDLKLQINERKQAEY----QLKHLALHDPLTG 486 Query: 379 FIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAE 429 + + + AV + L + + G D +++++++ R++ Sbjct: 487 LPNRLLFQDRLEQAIALSDRHQHKFAVFFMDLDNFKIINDTMGHDAGDELLKQVSLRLSC 546 Query: 430 KYAQCCDIVTFNADLYLLLCRENV---QTFTRKIAMVNDFDSSFGYRNLRI----HKSAI 482 + + D + + + T + + + I Sbjct: 547 TGRKTDTVARLGGDEFAFIITKVNTIEDAVTFAQRLNSLLKTPIEINGNNINMGSSIGIT 606 Query: 483 CEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGE 542 P N+ +A+ +D + F ++ N + ++ ++ Sbjct: 607 IYPDDAANSEELLRNADIAMYQAKDDGRNTVRFFTSEMNARLQRNKEVLTDLAESLTKEH 666 Query: 543 LFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAM 602 L YQP+ I+ ++GAEAL RW E+G+I P +FI +AE G INELG ++ A Sbjct: 667 FELYYQPLFTIDQNILVGAEALIRWHHPEKGMIPPDQFIAVAEKSGLINELGDWVLAQAC 726 Query: 603 GEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIE 662 E ++F F + IN+SP Q + I+ ++ + A + +EITE + Sbjct: 727 REIKNFLNAGITV--FKVAINISPVQFRRKDLLQHMLMILAQHDVSAELIELEITEGAVM 784 Query: 663 RINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG-- 720 + ++ L G ++++DDFGTG S+L +K+D F D+ Sbjct: 785 DNVDQAIETMQALHDAGFQLAMDDFGTGYSSLSYLKRFPIQKVKIDRSFISDLENDDDSK 844 Query: 721 KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 I I ++ + V+AEGVE+E+ L C QGY +P+P S + K Sbjct: 845 SITTAIIQMSHSLGLHVLAEGVETEEQLHYLQAEKCDYVQGYYTGRPIPASEFIK 899 >UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5X9_9PROT Length = 927 Score = 686 bits (1772), Expect = 0.0, Method: Composition-based stats. Identities = 109/594 (18%), Positives = 221/594 (37%), Gaps = 34/594 (5%) Query: 202 YLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSA 261 +++ +S +F E + R ++Y + ++ D Sbjct: 346 HISTTYSSVSGGRCFVFSTDLTEQKRAEESLRLAAMVYENSSEAILVTDADN------LI 399 Query: 262 VPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVN 321 + N FE Y +L + ++F + E+ + Sbjct: 400 IAVNPAFEQMTGYAAAEVLGKNPRIFK--SGRHDRAFYHSMWLALDTEGYWHGEVWDKRK 457 Query: 322 TLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIK 381 I ++ +G +++ I E K E + +YD + Sbjct: 458 NGEEYI-KLLTINVIRDDDGAIYRHVALFTDITERKKVE----ELIWRQANYDSLTKLPN 512 Query: 382 NMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYA 432 + +A+ +I L + V G D+ + ++ + +RI+ Sbjct: 513 RQMFHDRLEQEAKKAHRAGLSMALLLIDLDRFKEVNDTLGHDKGDILLIEAARRISACVR 572 Query: 433 QCCDIVTFNADLYLLLCRENVQTFTR---KIAMVNDFDSSFGYRN----LRIHKSAICEP 485 + + D ++++ E + ++ F + P Sbjct: 573 ESDTVARLGGDEFIVILSELEDMASIDRVAQDILGSLAEPFKLDAEPAYISASIGISLYP 632 Query: 486 LQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFL 545 + A+ + + F + + + +A ++R A+ G+ + Sbjct: 633 NDATELDVLFKHADQAMYVAKYAGRNRFNYFTKDMQEAAQARMHLANDLRIAVAAGQFRV 692 Query: 546 VYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEF 605 YQPIV++++ I AEAL RW RG++SP +FI +AE+ G I +G + + A+ + Sbjct: 693 YYQPIVEMSSGQIYKAEALIRWQHPVRGMVSPAEFIPLAEETGLIVPIGEWVFRQAVQQV 752 Query: 606 RHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERIN 665 + ++ F + +N SP Q + +++ + +S+ VEITE ++ Sbjct: 753 VQWRRKF--HRSFQISVNKSPVQFRHAESL-SWPEYLEQQHVSGDSIIVEITEGLLLDAE 809 Query: 666 EHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIV 723 + + R G++++IDDFGTG S+L E + D +K+D F ++ + + Sbjct: 810 VEVNKKLLRFRDAGIQVAIDDFGTGYSSLSYLKEFDIDYLKIDQSFVRNLGPGTSDLALC 869 Query: 724 RIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 I +A VIAEGVE+ L GC QGYLY +P+P +++ Sbjct: 870 EAIIVMAHKLGFKVIAEGVETSTQHELLAAAGCDYGQGYLYSRPLPPEEFERQL 923 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 104/468 (22%), Positives = 193/468 (41%), Gaps = 25/468 (5%) Query: 328 DSTDQI-EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII 386 I A +G + + + E K ++ +L + +D + + + Sbjct: 1043 HWVQAIGNAEYDSQGHPIRLRGLIMDVTERKTSQ----ERLNYMAHHDHLTDLPNRLLLK 1098 Query: 387 ES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDI 437 LAV I L + + G + ++++L QR+ + + Sbjct: 1099 ARLDQSIQQATRKRTKLAVVFIDLDRFKHINDSMGHAAGDALLQQLAQRLRQVLRSSDTV 1158 Query: 438 VTFNADLYLLLCRENVQTFTRKI---AMVNDFDSSFGYRNLRI----HKSAICEPLQGEN 490 + D ++ + + + ++ F+ F I P G + Sbjct: 1159 ARISGDEFVAVLEDIEDIQHASMVVAKLMTVFEEPFPLEGQIIHMTSSMGLSLFPDDGMD 1218 Query: 491 AWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPI 550 A+ ++ + + F + + E + +R A++ E +LVYQP Sbjct: 1219 TAILLRNADSAMYRAKEEGRNTYCFYAEEMTSAAFEYVLFENALRGALKRNEFYLVYQPQ 1278 Query: 551 VDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQ 610 +D+++ +G E L RW E GI+SP +FI IAE G I E+G ++ A + + + Sbjct: 1279 IDLSSHRWVGMEVLLRWHHPELGIVSPAQFIPIAEQSGLIQEIGTWVLYRACCQAKTWLD 1338 Query: 611 RASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYL 670 + + +NV+ Q+ + +F + +GL + L +E+TE ++ E Sbjct: 1339 QGIDFGH--IAVNVAAPQIQQNNFVHLVQDALDSSGLPSPHLELELTEGLVMHQTEDRIK 1396 Query: 671 NIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFD 728 +E L+ G+ ++IDDFGTG S+L + + +K+D F DI I + Sbjct: 1397 QLEVLQDMGIYLAIDDFGTGYSSLSYLKRLPINKLKIDKSFVRDIPHDTNDMAISEAVIA 1456 Query: 729 LARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKS 776 L + + +IAEGVE E A L + GC +AQGYLY KP+P + Sbjct: 1457 LGKALNLRIIAEGVEQEIQATFLREKGCHEAQGYLYSKPLPPEEITQL 1504 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 120/595 (20%), Positives = 215/595 (36%), Gaps = 40/595 (6%) Query: 218 FLKQGHEIIAKNQLAREKLIIYNSEGN---------YNIIDSVDTEYIEKTSAVPNNALF 268 + + +++A L+ E ID + V N + Sbjct: 341 YSEADGKMLASLAEYLAPLLAARLESRRAEELVARVLETIDEGFIIIDHEFKIVSANRAY 400 Query: 269 EIYFYYPGGNLLNAS--DKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFL 326 YP ++ + + + T L Sbjct: 401 AESAGYPLAEVIGRHCYQVSHQIDQPCYLNGEDCAVQHVFNTGEPHTAVHTHYTAAGEPL 460 Query: 327 PDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII 386 T + G + I + I + K+ E ++ L YD + Sbjct: 461 YVETKAYPLERDDLGTVRRAIEVVTDITDKKNRE----QEIHRLAFYDPLTRLPNRRLFF 516 Query: 387 ES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDI 437 + + Q+ AV + L + + G D + ++ +R+ E I Sbjct: 517 DRLEQAFSASARSGQHGAVLFLDLDNFKTLNDTRGHDVGDLLLTMAAERLQEAVRANDTI 576 Query: 438 VTFNADLYLLLC----RENVQTFTRK----IAMVNDFDSSFGYRNLRIHKSAIC----EP 485 D +++L E ++ + D F H Sbjct: 577 SRQGGDEFMVLLNNLSPERHAAISQAGRVAEKIRAALDQPFDLDGYEHHIGVSIGLSLFL 636 Query: 486 LQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFL 545 A ++ A+ + ++ F D E+E+ + ++R A+ G+ L Sbjct: 637 GHDTPADELFKRADAAMYQAKHAGRNQVRFFDPEMQAELEQASALVVDLRQAIWQGQFQL 696 Query: 546 VYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEF 605 YQP N I+GAEAL RW ERG +SP++FI +AE+ I +G +++ A G+ Sbjct: 697 HYQPQ-TANDGRIIGAEALLRWRHPERGPVSPMQFIPLAEESNLILAIGRWVLEEACGQL 755 Query: 606 RHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERIN 665 ++ + L +NVS Q +P F I+ G L +E+TE+++ Sbjct: 756 AAWADL-PAAGNCKLAVNVSARQFRQPEFVAEIRRILAATGADPKLLKLELTESIVMTEL 814 Query: 666 EHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIV 723 +++LR G+ S+DDFGTG S+L + + + +K+D F D+ IV Sbjct: 815 ADTVSKMQELRDLGIGFSMDDFGTGYSSLAQLKRLPLEQLKIDRAFVRDLGSDPHDDAIV 874 Query: 724 RIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 I + R I VIAEGVE+++ L + GC QGYL+ +P+P + + Sbjct: 875 ETIIAMGRTLDIQVIAEGVETKEQLATLARYGCDAYQGYLFSRPVPAAQFAHLLT 929 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 115/475 (24%), Positives = 197/475 (41%), Gaps = 26/475 (5%) Query: 317 TELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQE 376 L N + + S + AL G+ + + I E K AE K+ L +D Sbjct: 385 VPLDNGMHWFEMSVTRKSALP---GEEPLFLVLCRDITESKQAER----KIQLLAHFDSL 437 Query: 377 SGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRI 427 +G + + + N LA+ ++ L + V G ++++ L R+ Sbjct: 438 TGLPNRVLLTDRCNLALSAAQRNGTPLALLLLDLDHFKNVNDSLGHRVGDEVLIALAGRL 497 Query: 428 AEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIA--MVNDFDSSFGYRNLRI----HKSA 481 + + D ++L+ E IA ++ +F + Sbjct: 498 KGAVREQDTVCRLGGDEFILVLPETNAAGAAHIAEMLLQSALVAFELEPHELTVTPSIGI 557 Query: 482 ICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIG 541 P G + + + A+ + + + F E + + +R A+E Sbjct: 558 ALFPGDGSDFDTLSRCADAAMYRAKKDGRNNYRFFTAEMQARSERTLTLENALRRALERN 617 Query: 542 ELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTA 601 +L L YQP + + + ++GAEAL RW E G + P +FI +AE G I +G +++T+ Sbjct: 618 QLQLHYQPQISLASGRVVGAEALLRWSHPELGAVPPAEFIPVAETCGLILPIGEWVLRTS 677 Query: 602 MGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVI 661 + + + + L L +N+S Q E T+I+ E L A+ L +E+TE V Sbjct: 678 VQQLKAWIDAGML--PIALSVNLSSVQFRHADLPELVTSILNEAQLPAHLLELELTENVA 735 Query: 662 ERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTA 719 + L ++GVR+SIDDFGTG S+L + IK+D F DI Sbjct: 736 MTDPLGAIAVMNNLHERGVRMSIDDFGTGYSSLSYLKKFRVYKIKIDQSFVRDITEDSDD 795 Query: 720 GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 IV I +A + IAEGVE+E L GC + QGY + +P+P ++ Sbjct: 796 KAIVGAIISMATSLGMQTIAEGVETEGQLEFLKAKGCTEVQGYYFSRPLPVEQFE 850 >UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderia RepID=B2JN77_BURP8 Length = 915 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 118/576 (20%), Positives = 221/576 (38%), Gaps = 39/576 (6%) Query: 222 GHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLN 281 E+ R + ++S + D+ T + N+ F Y +++ Sbjct: 340 TAEVRESEAELRIAAVAFDSLEGMMVTDADGT-------ILRVNSAFTKCTGYTADDVIG 392 Query: 282 ASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREG 341 + +L L T E+ + P I A+K +G Sbjct: 393 RNPRL--LSSGRHDAAFFRDMWETIHRVGGWQGEIWDRRKNGEIYPKWL-TITAVKAVDG 449 Query: 342 DAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQ 392 + + I E K AE ++ L +D + + + N+ Sbjct: 450 NVTHYVGTHYDITERKLAE----EQIKELAFFDALTHLPNRTLLRDRLKQVIALSAQNHT 505 Query: 393 YLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE- 451 + A+ + L + + G D+ + ++ ++ R+ + + D ++++ + Sbjct: 506 HGALLFVDLDNFKTLNDTLGHDKGDLLLGQVAVRLLGSVREGDTVARMGGDEFVIVLSDL 565 Query: 452 -------NVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKL 500 +T ++ + A + ++ L Sbjct: 566 SRNRDEAASETEGAAEKVLTALSRPYYLAGTEFRTTASIGATLFTGHETSIDELLKQSDL 625 Query: 501 AISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILG 560 A+ ++ + F D A + E + +R A++ +L + YQ V +N + G Sbjct: 626 AMYKSKESGRNAICFFDPAMQTVVMERAALEAALRRAIDEDQLLVHYQAQV-LNGNRVTG 684 Query: 561 AEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLL 620 AEAL RW + G++ P +FI +AE+ G I LG +++ TA + +S R + + Sbjct: 685 AEALVRWQHPQHGLVPPAEFIPLAEETGLILALGDRVLDTACRQLAQWSLR-PDRAHLSI 743 Query: 621 HINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGV 680 +NVS QL E F + G + L +E+TE+V+ E + LR +GV Sbjct: 744 AVNVSAQQLRENSFVTSVLEALARTGADPSRLKLELTESVLVDNVEDIIRKMTLLRTKGV 803 Query: 681 RISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIPVI 738 S+DDFG G S+L + +K+D F D+ I R I LA+ + VI Sbjct: 804 VFSLDDFGVGYSSLSYLKRLPLGQLKIDRSFVRDVLDDPNDAVIARAIVALAQSLGLGVI 863 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 AEGVE++ + L GC QGYL+ +P+P ++ Sbjct: 864 AEGVETQAQRQFLADAGCHAYQGYLFCRPLPIEDFE 899 >UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IR9_DECAR Length = 952 Score = 686 bits (1770), Expect = 0.0, Method: Composition-based stats. Identities = 120/539 (22%), Positives = 224/539 (41%), Gaps = 32/539 (5%) Query: 261 AVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELV 320 + N F Y + + ++ L + R E+ + Sbjct: 419 ILRVNQAFLRDTGYAVEECVGQTPRI--LRSGRHDPAFYQKMWESIRSSGVWQGEIWDRR 476 Query: 321 NTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI 380 + P I A+ G+ I + ++E K AE ++ L YDQ +G Sbjct: 477 KDGSIYPKWL-TISAVLGDSGEVTHYIGLHQDVSERKLAES----RIHQLAYYDQVTGLP 531 Query: 381 KNMAIIESNNN---------QYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKY 431 + + E + Y + + L + + G + + +++++ + + Sbjct: 532 NRILLQERLSQVMAKCRASSNYGVLLFVDLDNFKTLNDTLGHNVGDLLLKQVGEVLRRCS 591 Query: 432 AQCCDIVTFNADLYLLLCRENVQTFTRKIA--------MVNDFDSSFGYRNL----RIHK 479 + + D + ++ E + + ++++ +F N+ + Sbjct: 592 RESDTVARLGGDEFAVIMSELGTDPSAAMQGAEAAARYLLSELGRTFQLGNVIHRNTVSI 651 Query: 480 SAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAME 539 A + E+ S ++ LAI + + F D + + E I +R+A+E Sbjct: 652 GATLFKGEQESIESLMRQIDLAIYQAKGAGRNTVRFFDPSMEIALRERAAIEEALRYAIE 711 Query: 540 IGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIK 599 + L YQ + I GAE L RW ERG++SP FI +AE+ G I LG ++K Sbjct: 712 EEQFLLHYQAQI-GEDGRIEGAEVLLRWQHPERGMVSPAIFIPLAEETGDIVLLGSWVLK 770 Query: 600 TAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITET 659 A + +++ + +L +NVS QL +P F E+ TT+++E G L +E+TE+ Sbjct: 771 QAAAQLARWAES-PVMAGLVLAVNVSAVQLRQPDFVEQVTTVLREAGADPGRLKLELTES 829 Query: 660 VIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA 719 ++ E ++ L+ G+ S+DDFGTG S+L + +K+D F D+ A Sbjct: 830 MLVNDVEATIAKMQSLKAIGIGFSLDDFGTGYSSLSYLKRLPLSQLKIDQSFVRDVLVDA 889 Query: 720 G--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKS 776 I + LA+ + VIAEGVE+E L +GC QGYL+ +P+P +++ Sbjct: 890 NDVAIASSVVALAKSLGLGVIAEGVETEAQRELLAGIGCHCYQGYLFSRPLPIGDFERL 948 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 686 bits (1770), Expect = 0.0, Method: Composition-based stats. Identities = 125/600 (20%), Positives = 218/600 (36%), Gaps = 70/600 (11%) Query: 232 AREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLN---------- 281 ++ I+ +++ DS + N E YP LL Sbjct: 494 MLQRAILNSAKLMILSTDSEGR-------VISCNPATEQMLAYPSAELLGRTPVECFFLR 546 Query: 282 ----ASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALK 337 + F + V L R+ + T I AL Sbjct: 547 EEIQERRRALSSETGFDPASDIDVLLARVRLGSVDQGQWTFQRKDGEKFI-VELSISALH 605 Query: 338 IREGDAKEIISIKNSIAEMKDAE----------------------------IERSNKLLS 369 + A+ + + + I E K AE +KL Sbjct: 606 PEDKKAQGFLFVASDITERKRAEDALLRSRDELELRVKERTSELESEVLERRRIESKLRY 665 Query: 370 LISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIV 420 L +D +G + + ++ +A+ I L + + G + ++ Sbjct: 666 LAHHDALTGLANRTLLQQRLGEAMDNAAQDDTKVAILFIDLDRFKTINDSLGHHIGDTLL 725 Query: 421 RKLCQRIAEKYAQCCDIVTFNADLYLLLCR---ENVQTFTRKIAMVNDFDSSFGYRNLRI 477 + + R+ E I D ++++ +++ + Sbjct: 726 KNVASRLTETLRSNDTIARLGGDEFMIILPLKANEALAGKLASKILDALRPPIRIDGHEL 785 Query: 478 ----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARN 533 P G + A+ + + + + + + I + Sbjct: 786 FVTPSIGICFYPNDGVTVNALMRNADTAMYQAKANGRNTYCYFTAEMNAAADNYFQIESD 845 Query: 534 IRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINEL 593 +R A++ E + YQP++D+ T I EAL RW +G++ P +FIT+AE+ G I E+ Sbjct: 846 LRRAVDRNEFEVFYQPVIDLKTHRITSYEALVRWRHPTKGLVGPAQFITVAEESGLIGEI 905 Query: 594 GYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLC 653 G +++ A + R + +N+SP Q N+P+ E I+++ L + + Sbjct: 906 GTIVLRQACSQLRSWIDEGFTSPIL--ALNLSPIQFNDPNLTEGICRILRDYDLTPDRIE 963 Query: 654 VEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTG 713 +EITETVI + E ++ L +G R+SIDDFGTG S+L D++K+D F Sbjct: 964 LEITETVIMQDGELALGTLQNLSSRGFRLSIDDFGTGYSSLAYLKRFPVDTLKIDRSFIT 1023 Query: 714 DIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFS 771 D+ IV I LA + VIAEGVE+++ L L C AQGY KPMP Sbjct: 1024 DMTANENDRAIVTAIMALANSLHLSVIAEGVETKEQYDLLSALNCNFAQGYYMAKPMPAE 1083 >UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Comamonadaceae RepID=A1WHK4_VEREI Length = 836 Score = 686 bits (1770), Expect = 0.0, Method: Composition-based stats. Identities = 117/572 (20%), Positives = 219/572 (38%), Gaps = 30/572 (5%) Query: 233 REKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFA 292 R + + +SE + + + +++ + A G L + + A Sbjct: 263 RVENQLRDSEARFRSLSDLSSDWYWEHDAQGRFTQLAGDLSVNGMPLSAVLGRTRWEIGA 322 Query: 293 FIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDST-DQIEALKIREGDAKEIISIKN 351 + ++ F ++ ++ +G + + Sbjct: 323 LNMTEADWAAHRAVLAAQQPFRDLELQRRRADGSMHWISVSGVPVQGADGTPRGYRGVGR 382 Query: 352 SIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLC 402 I K AE ++ L YD +G +++ +N A+ I L Sbjct: 383 DITGRKQAEG----QIERLAFYDALTGLPNRRLLLDRLQHATVAVTRSNTQGALLFIDLD 438 Query: 403 GLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKI-- 460 +++ G D + ++++ QR+ + + F D +++L + Sbjct: 439 NFKSLNDTLGHDAGDHLLQQAAQRLKACVREVDTVARFGGDEFVVLLAGLSAAAAQASAE 498 Query: 461 ------AMVNDFDSSFGYRNL----RIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMF 510 + + Q ++ LA+ + Sbjct: 499 AAQVAKHIAASLGQPYALGGAVHHSTPSIGIALFGPQACRVDELLKQADLAMYQAKAAGR 558 Query: 511 SEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSA 570 + F D + ++R ++ EL L YQP+VD + GAEAL RW Sbjct: 559 NTQRFFDPEMQAAASHRSALEADLRRGLQQRELVLHYQPMVDGQ-GRLQGAEALVRWNHP 617 Query: 571 ERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLN 630 +RG++ P +F +AE G I LG +++TA + +S+ A + F L +NVS Q Sbjct: 618 QRGLMPPAEFTPLAEQTGLILPLGQWVLETACAQLVAWSRSALTRA-FSLSVNVSVRQFR 676 Query: 631 EPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTG 690 + F ++ ++ +G L +E+TE+++ + ++QLR G+ ++DDFGTG Sbjct: 677 QADFVQQLLATLEASGANPERLTIELTESLLLNDVQDIIARMQQLRCHGLGFALDDFGTG 736 Query: 691 LSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVA 748 S+L + + D IK+D F D+ G IVR I LA+ + V+AEGVE+ Sbjct: 737 YSSLSQLKRLPLDQIKIDRSFVRDLPADAGDGAIVRSILALAQSLGLAVVAEGVETRAQL 796 Query: 749 RELIKLGCVQAQGYLYQKPMPFSAWDKSGKLV 780 L GC QGY + +PMP A ++V Sbjct: 797 EFLQHHGCQTFQGYHFGRPMPPEALAHRFQVV 828 >UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GLY5_THISH Length = 1082 Score = 685 bits (1769), Expect = 0.0, Method: Composition-based stats. Identities = 135/752 (17%), Positives = 267/752 (35%), Gaps = 60/752 (7%) Query: 39 AVKRADSRFELIQKNVGYFFKDIERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSV 98 A + SR E+ +++ + ++R + + E+ + +++ +D Sbjct: 354 AGRLLQSRVEMRTEHLNVANRSLQREVEQRRQA------EAEVLAQSRRQAQVLEAVDEA 407 Query: 99 GLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNN 158 LD + F+ A + + Q+ G + ++ D + Sbjct: 408 IFGLDADCRVEFANPAAEALAGCSIGQMRGQRLSGVLQIRD--------------DQGRS 453 Query: 159 SWNPAYNCFDR-PGKKCISFTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVL 217 +W P +C P I D + VD L+ V Sbjct: 454 AWEPDGDCLAEDPMPVSIRRAFDQTLYHRDGR---VLVVDY---AFRPILEGGQVRGGVF 507 Query: 218 FLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGG 277 + + R ++++ +I + N FE Y Sbjct: 508 SCRDITGRKRIEESLRLHAQVFDTATEGVMIADARGRILS------VNRAFEQVTGYSAE 561 Query: 278 NLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALK 337 ++ + + L T + E+ P+ I ++ Sbjct: 562 EVVGRNPSI--LSSGRQDKAFYRRMWDTIKGEGIWSGEIWNRRKDGEIYPEWL-TISSIA 618 Query: 338 IREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--------- 388 G+A +++ + I K +E ++ L ++D +G + Sbjct: 619 GPNGEASHFVAVFSDITAQKRSE----QEIDFLANHDPLTGLANRNLFEDRLAHAISMAG 674 Query: 389 NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL 448 N Q++ + ++ L + G + ++R+ +R+ + D + ++ Sbjct: 675 RNGQHVGLLLVDLDRFRLINDGMGHGPGDALLRETGRRLGHCVRDSDTVARLGGDEFGII 734 Query: 449 CR---ENVQTFTRKIAMVNDFDSSFGYRNLR----IHKSAICEPLQGENAWSYAEKLKLA 501 + + ++ + + P G +A + A Sbjct: 735 LEGLADAADAGMQAERILEAMRAPLRLGGQELFCTVSIGIAVFPADGTDAATLLRHADTA 794 Query: 502 ISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGA 561 ++ + + F F A + + I +RHA+E EL L YQPI+D + I Sbjct: 795 MALAKREGRNNFQFYTHALTEAVFSRLNIETGLRHALERDELRLHYQPILDAASGRIAAM 854 Query: 562 EALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLH 621 E+L RW ERG++SP FI +AE I LG + +A + R +S + + Sbjct: 855 ESLMRWQHPERGLVSPGVFIPVAEQSDLILALGRWALVSACAQVRAWSDAGL--EPVPVS 912 Query: 622 INVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVR 681 +N+ +P F E +++E G++ SL +E+TE+ + I +LR GV Sbjct: 913 VNIPACHFRQPGFVEEVLGVVRETGVQPQSLIIELTESALMEPVSLAEERIRRLRDTGVV 972 Query: 682 ISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVIA 739 ++IDDFGTG S+L + + +KVD F + G I + ++ + V+A Sbjct: 973 VAIDDFGTGYSSLGYLQRFHVNYLKVDRSFVSGLPGDENARAITEAVIGVSHSLGLQVVA 1032 Query: 740 EGVESEDVARELIKLGCVQAQGYLYQKPMPFS 771 EGVE++ L GC + QGYL +P+ Sbjct: 1033 EGVETQAQLDHLRATGCDKVQGYLTGRPVTAE 1064 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 685 bits (1769), Expect = 0.0, Method: Composition-based stats. Identities = 110/463 (23%), Positives = 193/463 (41%), Gaps = 30/463 (6%) Query: 335 ALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES------ 388 + +G I + K AE ++ L YD +G +++ Sbjct: 368 PHREPDGSVVSH-GFTMDITDRKRAE----QEIERLAFYDALTGLPNRRMLLDRLQRAVA 422 Query: 389 ---NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLY 445 Q+ A+ I L + + G D + ++ ++ R+ + + F D + Sbjct: 423 ATSRTQQFGALLFIDLDNFKDLNDTLGHDMGDHLLSQVAARLLACVRETDTVARFGGDEF 482 Query: 446 LLLC----RENVQTFTRKI----AMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWS 493 +++ E + ++ ++ + F + + + Sbjct: 483 VVMLETLRPELTEAASQAEIVAEKLLASLNQPFALGGQQHYSTPSIGITLFGDERLSVDE 542 Query: 494 YAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDI 553 ++ LA+ + + F D + + ++R + GEL + YQP+VD Sbjct: 543 LLKRADLAMYQAKGAGRNTQRFFDPDMQAAVNARSNLEADLRQGLARGELCVYYQPVVDH 602 Query: 554 NTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRAS 613 +LG EAL RW RG+ISP FI +AE G I LG Q+++TA G+ + + +R Sbjct: 603 RA-RLLGVEALVRWRHPVRGMISPADFIPLAEQTGLILPLGQQVLQTACGQLQRWGER-K 660 Query: 614 LKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIE 673 + +NVS Q +P F ++ G L +E+TE+++ E +E Sbjct: 661 QTRHLSVSVNVSARQFRQPGFVAEVLQTLQGCGADPRKLKLELTESLLLGDVEDTIARME 720 Query: 674 QLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLAR 731 QL+++GV ++DDFGTG S+L + D +K+D F D+ IVR I LA+ Sbjct: 721 QLKREGVGFALDDFGTGYSSLSYLKRLPLDQVKIDQGFVRDVLTDPNDAAIVRTILALAQ 780 Query: 732 YNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 + V+AEGVE+ L GC QGYL+ +P P D Sbjct: 781 SLDLEVVAEGVETTGQLAFLRLHGCEGFQGYLFGRPGPVEDID 823 >UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21SH7_RHOFD Length = 658 Score = 685 bits (1769), Expect = 0.0, Method: Composition-based stats. Identities = 114/535 (21%), Positives = 222/535 (41%), Gaps = 28/535 (5%) Query: 261 AVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELV 320 V N F Y ++L+ + L L + V E+ Sbjct: 128 IVRINPAFSEITGYSAADVLDQTPAL--LRSGRHDSAFYAAMWDSINVSGHWQGEVWNRR 185 Query: 321 NTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI 380 P I+ ++ G +++ +++++ +++E L L +D + Sbjct: 186 KNSEIYPQ-LISIDVIRDHTGRVCNYVAVLTDLSKLRSSQLE----LDFLAHHDPLTRLP 240 Query: 381 KNMAII---------ESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKY 431 + ++ + +LA+ ++ L + + FG +++++ + R+ ++ Sbjct: 241 NRLLLLSRLQHGIELAQRDGTHLALLMLDLDRFKDINDSFGHLVGDELLQLVATRLVKQV 300 Query: 432 AQCCDIVTFNADLYLLLCRENV---QTFTRKIAMVNDFDSSFGYR-NLRI----HKSAIC 483 + F D + +L + Q ++ +G + + Sbjct: 301 RTIDTVGRFGGDEFSVLMEDVAGAEQAARVANDIIRVLSEPYGLSSGVEVRIGASVGISI 360 Query: 484 EPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGEL 543 P G ++ A+ + F + ++ I I +R A+ GEL Sbjct: 361 YPDNGLTPELMLQQADSALYQAKIEGRGRFAYFSESLTQAARARIDIEVRLRRAITQGEL 420 Query: 544 FLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMG 603 + YQP VDI + I+GAEAL RW G++ P +FITIAE G I E+ +++ Sbjct: 421 RVYYQPQVDIPSGRIVGAEALVRWQCPIEGLVPPARFITIAEATGLIGEIDDWVLRETCQ 480 Query: 604 EFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIER 663 + + + L +N+S +Q + + ++++ G A L +E+TE+ + + Sbjct: 481 QGQRWRAAGL--PTLTLAVNLSAYQFLQGDISQTVAQVLRDTGYPAAFLELELTESALMQ 538 Query: 664 INEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGK 721 +++L+ GVR++IDDFGTG S+L D +K+D +F DI + Sbjct: 539 REAQAIQMLDRLKALGVRLAIDDFGTGYSSLAYLKLFPLDVLKIDKRFIDDIPAHRDDME 598 Query: 722 IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKS 776 IV I +A R+ V+AEGVE+++ L GC Q QGYL +P+P + ++K Sbjct: 599 IVTAIIAMAHSLRLKVLAEGVENKEQLAYLQTQGCDQFQGYLTSRPVPAAEFEKL 653 >UniRef50_B7LP31 Putative uncharacterized protein yliE n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LP31_ESCF3 Length = 782 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 300/773 (38%), Positives = 476/773 (61%), Gaps = 1/773 (0%) Query: 1 MLSLYEKIKIRLIILFLLAALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKD 60 M S+ EK+ +A +I L + + A + + EL++ N+ +F Sbjct: 1 MYSISEKVNSSFKFAITVAIAVYILLSLFTAFDFHKKIAESSSKNHQELLRNNLRNYFSK 60 Query: 61 IERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVV 120 +E+ A LKD+LYLL++ EEI+RA+I +M + ++ VGL++++ KYY F R +I + Sbjct: 61 VEKEADALKDALYLLQDEEEIKRALIHRMAKIEGINLVGLMMNNGKYYSFIRTPGGEIKL 120 Query: 121 YHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLH 180 + PL G VI +FNP RPW+ + + W Y+C+ PGKKC +F+L Sbjct: 121 QAKFVPGRPLTGADGEVIDENFNPLSRPWNDIPPGAVSKWASWYDCYGMPGKKCFTFSLS 180 Query: 181 INGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYN 240 + + + A+ IH+DL+ +YL +L+ +++FL+ II N+ + LI+ + Sbjct: 181 PSENEKNNFAIKLIHLDLDEKYLTNFLNAQGKPGDIIFLENNGRIIGGNEESTLHLIVKD 240 Query: 241 SEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLV 300 + G Y + D EY EK +P + +++Y + L+ +K F L F I+ + Sbjct: 241 TNGEYRTSNDTD-EYFEKVIILPKLPDVKFHYFYSLNSKLSYLNKSFVLMFMSGIVCFFL 299 Query: 301 VYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAE 360 ++ + + R+ E +LV L L +S + + + I D++EI+ +K I + + Sbjct: 300 LWYIIIVITRKISGESGKLVRNLEHLGNSVYKEDKVDISTEDSREIVELKKIINTIGEKY 359 Query: 361 IERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIV 420 ER ++L+L+SY+Q + F N A+IE+NN Y+A G+I L GLE EA++G ++ N I+ Sbjct: 360 KERIERMLNLVSYEQGTSFYINTAVIETNNKDYVAAGMICLYGLEFAEAIYGSEKYNAII 419 Query: 421 RKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKS 480 +L +I+ KY+ CDI+ + D YLLLC + + F +++N ++ F RN+ +HK+ Sbjct: 420 SELKSKISAKYSSHCDIIKISNDRYLLLCYTDCEEFISNFSVLNLPENIFCLRNIYVHKT 479 Query: 481 AICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEI 540 A+CE G++ Y KLKLA++++R++ SEF++ DD KL+E+++ +W+A NI+HA+ Sbjct: 480 ALCETFSGKDVSIYEGKLKLAMTAMRENKQSEFLYYDDIKLHELDQKVWVASNIKHAISR 539 Query: 541 GELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKT 600 GE +LVYQPIV+I++ ++GAEALCRW SAE G ISP F++IAEDIG I ELG I++ Sbjct: 540 GEFYLVYQPIVNIDSNEVVGAEALCRWNSAEYGFISPAVFVSIAEDIGLIKELGDYILEN 599 Query: 601 AMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETV 660 A+ EF FS + D+FLLHINVSPWQLN+ FH R ++K+ + A +C+EITE+ Sbjct: 600 AIREFSQFSNEYVISDEFLLHINVSPWQLNDFDFHHRVLQLIKDFNINAGQICLEITESA 659 Query: 661 IERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG 720 ++ IN+ FY NI L+ G++I++DDFG+GL++LK+ Y++ PDSIK+DS+FT +F Sbjct: 660 VKEINDSFYNNIIVLKGNGIKIALDDFGSGLADLKKLYKVKPDSIKIDSEFTSGVFDETN 719 Query: 721 KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 +IV I AR +PVIAEGVE+E A+EL KLG Q QGYLYQKP+PFS W Sbjct: 720 RIVWFISSFAREENLPVIAEGVETEHQAKELQKLGFSQVQGYLYQKPLPFSEW 772 >UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W545_9CYAN Length = 709 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 110/455 (24%), Positives = 191/455 (41%), Gaps = 23/455 (5%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES----- 388 LK +G I+ I+ K E +L +D + +E Sbjct: 245 APLKDADGVITHIVFSVTDISHHKHVE----EQLCHDALHDNLTRLPNRTLFMERVNHAI 300 Query: 389 -----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 N + AV + L + V G D ++++ +++ + + + D Sbjct: 301 KLAKRNQDYLFAVLFLDLDRFKVVNDSLGHDVGDQLLTATARQLEKCVRTTDTVAHLSGD 360 Query: 444 LYLLLCRENVQ---TFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAE 496 + +L + + + F N + E + Sbjct: 361 EFTILLEDIKDIKDATRVAERIQATLKAPFNLNNHEVFTSASIGIALSSTGYERSEDILR 420 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 +A+ ++ + D E + + ++R A+E E + YQPI + T Sbjct: 421 DADIAMYRAKELGKARHEIFDKIMHARALELLRLENDLRRALERQEFEVYYQPITSLVTG 480 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 + G EAL RW E G++SP +FI +AED G I LG ++ A + R + + + Sbjct: 481 MLTGFEALVRWRHPELGLVSPAEFIPVAEDTGLIIPLGEWVLHEACRQLRMWHTQFPTPE 540 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +N+S Q+ EP E+ I+ E GL + L +EITE+++ E + QLR Sbjct: 541 PLKMSVNLSGKQIKEPDLIEQIDHILAETGLDGSFLKLEITESILMENAETVTKMLLQLR 600 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNR 734 + +++S+DDFGTG S+L + +++K+D F + +I+R I LA R Sbjct: 601 ARNIQLSVDDFGTGYSSLSYLHRFPVNTLKIDRSFVSKMNPKNRNTEIIRTIITLAHSLR 660 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMP 769 + VIAEGVE+ + EL L C Q QGYL+ KP+ Sbjct: 661 MDVIAEGVETLEQLTELKLLNCEQGQGYLFSKPLT 695 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 91/442 (20%), Positives = 177/442 (40%), Gaps = 20/442 (4%) Query: 348 SIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGI 398 ++ + + + ++ L YD + +++ + LAV Sbjct: 413 ALLEETTQRMNEQELNEQRIEYLAHYDTVTKLPNRFSLMARLGQALELAKRFSSRLAVIF 472 Query: 399 IKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR---ENVQT 455 I L + + G ++++ ++ R+ + + D ++++ N+ Sbjct: 473 IDLDRFKNINDSLGHHIGDRLLFQVAGRLQDTIRSADIVARLGGDEFVVVLPLINSNISA 532 Query: 456 FTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFS 511 + + + + P GE + LA+ + + Sbjct: 533 AHAVRKIQQTLSQGYTVESHELNITPSIGISVYPTDGETVQELMKNADLAMYHAKSAGRN 592 Query: 512 EFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAE 571 + F ++ + + ++R A+E E+ L YQP +D+ + ++G EAL RW Sbjct: 593 SYQFFTQEMNLTVQARLVLESDLRTALERDEMMLHYQPQIDLKSGEVVGVEALLRWRHPV 652 Query: 572 RGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNE 631 RG ++P FI +AED G I +G +K+A + + + + +N+S Q + Sbjct: 653 RGAVAPDVFIPVAEDTGLILSIGEFALKSACEQLALWISQGL--SPLRMAVNLSARQFKQ 710 Query: 632 PHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGL 691 + I+ G+ A+ L +EITE+ +++ LR+ GV ++IDDFGTG Sbjct: 711 SNLPSLLADILAATGVAAHLLELEITESSAMDDPNTAIVHLRTLREMGVELAIDDFGTGY 770 Query: 692 SNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVAR 749 S+L + +K+D F I +I LA V+AEGVE+E R Sbjct: 771 SSLSYLKLFPVNRLKIDRSFVRGIDTDSEDAEIAAATIALAHNLGKEVVAEGVETEAQCR 830 Query: 750 ELIKLGCVQAQGYLYQKPMPFS 771 L C QGY + +P+ + Sbjct: 831 FLRGQQCDILQGYFFSEPLSAA 852 >UniRef50_Q21XK7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21XK7_RHOFD Length = 716 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 118/594 (19%), Positives = 221/594 (37%), Gaps = 39/594 (6%) Query: 207 LDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNA 266 + +S N ++ ++ + A R ++ G +I D + V NA Sbjct: 114 VKPVSTNVLIVRVRNLIQRNADRIQLRLAAHVFEYSGEAIMITDRDNQI------VDVNA 167 Query: 267 LFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFL 326 F Y +L+ + K L R E + + Sbjct: 168 AFTTLTGYHKSEVLSKNPKF--LSSGRTTRKEYQAMWAAIRTGGFWQGEFWDRRKDGSVF 225 Query: 327 PDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII 386 P + + R GD ++ ++ K+ E ++ L +D +G + + Sbjct: 226 P-KMMTVSVVLDRAGDIDFYLANFVDVSHYKETER----RIEHLAHHDTLTGLPNRLHLQ 280 Query: 387 ---------ESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDI 437 ++ LAV + L + + G + ++ ++ R+ Q + Sbjct: 281 VFLEQSILIAKRMSEQLAVVFLDLDRFKTINDTLGHPVGDDLLIQVADRLKTSVRQYDMV 340 Query: 438 VTFNADLYLLLC-----RENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQG 488 D ++++ KI + + F + P G Sbjct: 341 ARLGGDEFVMILRGHDMPSVASAVAEKIRL--HLNQPFQIGQHTLRTATSIGIALYPGNG 398 Query: 489 ENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQ 548 E + A+ + + F F E + + + A+E + L YQ Sbjct: 399 ERMDDLMKHADTAMYFTKSEGGNGFCFFSSDMNLHAHEKLELENLLHGALENQQFELYYQ 458 Query: 549 PIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHF 608 P + + + ++GAE L RW E+G ISP FI +AE I +G +++ A + + Sbjct: 459 PQLSLPEQQVIGAEVLLRWHHPEKGFISPAVFIPLAEATNQIGAIGEWVLENACRQASQW 518 Query: 609 SQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHF 668 + + +NVS Q + + ++ E GL A+ L +EITET + + Sbjct: 519 LRDGLPLP--RIGVNVSGRQFQDKNLFTLVKRVLAETGLPADRLELEITETAVTASPDEA 576 Query: 669 YLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA----GKIVR 724 ++ LR+ G+ +++DDFG G S+L + ++ D +K+D+ F DI G I Sbjct: 577 ARLLQSLRECGIMVALDDFGQGYSSLGQLRDLPIDRLKIDAAFVRDITDEPGHPGGAIAA 636 Query: 725 IIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 L VIAEGVE++ L+ GC + QGY + KPMP ++ + Sbjct: 637 ATIGLGHNLGFSVIAEGVETQAQLSFLMAHGCDEVQGYYFAKPMPREQFEAFLR 690 >UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FU0_DECAR Length = 1006 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 106/582 (18%), Positives = 206/582 (35%), Gaps = 29/582 (4%) Query: 209 QISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALF 268 + + L + + + Q ++ + S Y+ + T+ K + N F Sbjct: 426 EYGRDGTPLRVIGTSQEVTAQQEMLAQMQLLASAVQYSGEAILITDVKNK--ILTVNPAF 483 Query: 269 EIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPD 328 Y + L + E+ + P Sbjct: 484 TRLTGYTSEEAVGRDPSF--LSAGRTMPEEYERMWNGIAERGFWQGEIWDRRKDGGIYPK 541 Query: 329 STDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKN------ 382 I ++ +G + ++ ++ + AE +L + +D +G + Sbjct: 542 W-MSISVIRGEDGMIRYHVAHFTDVSSERAAE----ERLHHMAHHDVLTGLLNRLSLKGR 596 Query: 383 ---MAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVT 439 + +AV + L + + G ++++ ++ R+ + + Sbjct: 597 LDQALAAARRDGSRVAVLFVDLDRFKVINDTLGHHVGDELLIEVANRLRDGVRDSDVVAR 656 Query: 440 FNADLYLLLCR--ENVQTFT-RKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAW 492 D ++++ E+ +V S+ + P GE+ Sbjct: 657 VGGDEFVIMLSGVEHTSAVAMVAEKLVFSVGQSYQIGGYDLYSTPSIGIAIYPTDGEDGD 716 Query: 493 SYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVD 552 + A+ + + F F D E + +R A+ E L YQP++D Sbjct: 717 ILMKNADAAMYHAKMAGRNNFQFFDAKMNEAALERLNTEHALRRALANQEFCLYYQPVID 776 Query: 553 INTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRA 612 + + + EAL RW E+G++ P KFI IAE+ G I LG ++ A + F+ Sbjct: 777 LASNRVASLEALIRWNHPEKGLLLPGKFIGIAEETGLIQPLGEWVLWAACRQLADFAAAG 836 Query: 613 SLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNI 672 + +N+S Q+ + +++ + +L EITE+V + Sbjct: 837 I--SGIKMGVNISAIQMRNGNLPLLARGVIEAYDIDPRNLIFEITESVAMEQPTETVRIL 894 Query: 673 EQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLA 730 + L GV ++IDDFGTG S+L + +K+D F I I LA Sbjct: 895 DLLNAMGVSVAIDDFGTGYSSLSYLRMFPINHLKLDRSFVEQIGEEIDGCVICDATIGLA 954 Query: 731 RYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 + V+AEGVE++ L GC QG+L+ +P+P Sbjct: 955 HSLELKVVAEGVETQAQLDYLRSRGCDMVQGFLFSRPVPADE 996 >UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1G1_PELCD Length = 1061 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 108/536 (20%), Positives = 203/536 (37%), Gaps = 34/536 (6%) Query: 265 NALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLA 324 N F Y + + +L T R E + Sbjct: 532 NPKFTQITGYSLTEVHGKNPRLLKSGETS--AEEYRDLWTTITAGREWHGEFHNKRKDGS 589 Query: 325 FLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMA 384 + I ++ GD ++IK I + K E +L L ++D +G Sbjct: 590 LFWE-HASISPVRNDAGDISHFLAIKEDITDRKRYE----EQLQHLATHDNLTGLANRAL 644 Query: 385 IIESNNNQYLAVGIIK------------LCGLEAVEAVFGVDERNKIVRKLCQRIAEKYA 432 + + + K L + + G +++++ R+ E Sbjct: 645 LQDRLEQS---ILFAKRSGRLVAALLLDLDRFKIINDSLGHSFGDRLLQIAADRLRESVR 701 Query: 433 QCCDIVTFNADLYLLLCRENV---QTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEP 485 + D +++L E +++ + F + I P Sbjct: 702 GADTVARLGGDEFVILLAEVANEEDVGKVAKKILDRITAPFQIADREITVTASLGISIYP 761 Query: 486 LQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFL 545 GE+ + +A+ ++ + F + E + + ++R A++ GEL L Sbjct: 762 QDGEDEETLIRNADIAMYQAKEEG-NAFRLYAPEMNIVVHEAMEMETDLRRALDRGELLL 820 Query: 546 VYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEF 605 YQP +D+++ I GAEAL RW RG+I+P FI +AE+ G I +G +++ + Sbjct: 821 HYQPKIDLDSGKITGAEALVRWQHPVRGMIAPGMFIPLAEETGLILPIGEWVLENICLQI 880 Query: 606 RHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERIN 665 + + + + N+S Q I+++ GL + L +E+TE++I R Sbjct: 881 KSWQTQGF--PLVPIAANLSARQFRNDELIATIQRILQDTGLPPHLLELELTESMIMRNV 938 Query: 666 EHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTA--GKIV 723 + +++L GV +++DDFGTG S+L D +K+D F D+ + Sbjct: 939 QTAAETMQELNALGVSLALDDFGTGYSSLNYLRRFPVDCLKIDRSFISDVADDPSAAAVA 998 Query: 724 RIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKL 779 I +A + +AEGVE+E+ L + C QGYLY P+ + + Sbjct: 999 TSIIAIAHSLGLQAVAEGVETEEQLEFLRQCACDSYQGYLYSAPLAVEEFTAMLRQ 1054 >UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YA12_9BURK Length = 786 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 106/540 (19%), Positives = 213/540 (39%), Gaps = 31/540 (5%) Query: 261 AVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELV 320 + N+ F+ Y + + + + V + R E+ + Sbjct: 239 ILQVNSAFQRVTGYLPEEAIGKAPRDL-MGSGIQTQEFYEVMNESIRSNGSWQGEVWDRR 297 Query: 321 NTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI 380 P T I A++ GD ++ + + K AE N++ +L+ +D + Sbjct: 298 KNGETYPAWT-TITAVRSESGDVTHYVANLSDFSARKAAE----NEIKTLVYFDSLTMLP 352 Query: 381 KNMAIIESNN---------NQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKY 431 ++ A+ + L + + G + + +++++ R+ Sbjct: 353 NRRMLMGRLETAMHAALSTGHLGALLFVDLDDFKTLNDTLGHHQGDILLQQVANRLQSCV 412 Query: 432 AQCCDIVTFNADLYLLLCRENVQTFTRKI--------AMVNDFDSSFGYRNLR----IHK 479 + + D ++++ + ++ + + L Sbjct: 413 READTVARLGGDEFVVMLEGLSKDVAEASTQAEAVAGKVMQALNQPYDLGTLTRSSTPSV 472 Query: 480 SAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAME 539 Q E+ ++ LA+ + + D + + +R A+E Sbjct: 473 GITVFGKQQESLDEPLKRADLAMYQAKAAGRNTSRLFDPKTQAAVTLRADLEAALRTALE 532 Query: 540 IGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIK 599 + L QP + + GAEAL RW RG++ P +FI +AED G I +G ++ Sbjct: 533 EEQFVLYLQPQIS-EDVRVTGAEALIRWQHPTRGLVMPGEFIAVAEDCGMIVPIGNWVLN 591 Query: 600 TAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITET 659 TA + ++ + + +NVS Q ++ F E+ + +G +A+ L +EITE+ Sbjct: 592 TACKQLALWATQ-PAFAHMTIAVNVSAKQFHQHDFVEQVLDALSRHGAQASGLKIEITES 650 Query: 660 VIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD--IFG 717 ++ + + +E+L+ GV ++DDFGTG S+L + D +K+D F D + Sbjct: 651 MLIANVDDVIVRMEELQHHGVGFAMDDFGTGYSSLTYLKRLPLDVLKIDQSFVRDVLVDT 710 Query: 718 TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 I +I LA + VIAEGVE+ + + L + GC QGYL+ +P+P ++ S Sbjct: 711 NDAAIANMIVALANSMGLSVIAEGVETVEQMQYLARHGCHAYQGYLFSRPVPVERFETSL 770 >UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellular organisms RepID=Q5P8Z7_AZOSE Length = 1008 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 119/598 (19%), Positives = 230/598 (38%), Gaps = 36/598 (6%) Query: 198 LNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIE 257 L + + A ++ L+ E +N R + + + I D + Sbjct: 387 LQYDREGRAVRVCGAIQDITELRAT-ETALRNSEERFSIAMTAAPFAVAITRVEDGRF-- 443 Query: 258 KTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMT 317 V N +E++F + L+ + L + +L R Sbjct: 444 ----VEVNDKYELHFGWKREELIGKTSVETNL-WPDPESRQ--RWLEMLRQHGSVLD--F 494 Query: 318 ELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQES 377 E + + + I K +++ + I + K+A+ ++ L +D + Sbjct: 495 ETLGCERNGAVRQVSLSSRYIDIDGEKHVLTFVHDITDRKEAQA----RIEYLAHHDALT 550 Query: 378 GFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIA 428 G + + + +A+ + L + + G + +++ + R+ Sbjct: 551 GLPNRVLFRDRFALATAWAERAHAKVALLFVDLDHFKTINDTLGHPVGDGLLQGVALRLR 610 Query: 429 EKYAQCCDIVTFNADLYLLLCRENVQTFT---RKIAMVNDFDSSFGYRNLRI----HKSA 481 E + + D +L+ + + + F + Sbjct: 611 ECLRETDTVSRLGGDEFLIALTDIRDPQAINSATAKIFDTLTRPFELEGHELTNTMSIGI 670 Query: 482 ICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIG 541 P GE+ + + A+ + + + F + E + + + A+E Sbjct: 671 AIWPDDGEDFDTLLKNADTAMYQAKRAGRNTWRFYTEQMNANAVEQLQLRTALHSALEND 730 Query: 542 ELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTA 601 E L YQP +++ + ++G EAL RW +R ++ P +FI AE+ G I +G +++ A Sbjct: 731 EFLLHYQPQINLASGHVVGVEALLRWHWDKRELVPPDRFIPAAEESGLIVPIGDWVLREA 790 Query: 602 MGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVI 661 + ++++ + + +N+S Q + +GL L +E+TE+++ Sbjct: 791 CMQAVRWTRQGL--PELTIAVNLSAVQFRRGDLERSVVRALSLSGLDPARLELELTESLL 848 Query: 662 ERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TA 719 E + +L+ GVR+SIDDFGTG S+L D +K+D F DI Sbjct: 849 LVDTESVIETLRRLKSLGVRLSIDDFGTGYSSLAYLKRFAVDKLKIDQSFVRDIATDPDD 908 Query: 720 GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 IVR I +A ++ VIAEGVESED+ R L C +AQGY Y +PMP A + Sbjct: 909 AAIVRAIVSMAHTLKLQVIAEGVESEDIDRFLHIFNCDEAQGYHYARPMPGDALAEWL 966 >UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Bacteria RepID=B7KEB0_CYAP7 Length = 684 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 133/606 (21%), Positives = 242/606 (39%), Gaps = 49/606 (8%) Query: 204 NEYLDQISANDEVLFLKQGHE----IIAKNQLAREKLIIYNSEGNYNIIDSVDT--EYIE 257 + ++Q + +++ + II + + E NY + + D + E Sbjct: 80 KKVVEQELKHGDIINFSNEIQATYYIINSPVNSSFSPQYHYLENNYKSLTATDINKKIKE 139 Query: 258 KTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMT 317 KT P + LF++ + +F + F I L + + +++ Sbjct: 140 KTIVYPQDFLFKLASLVELSP-----NPIFEVNFQGKITYLNSLANQKFKDLKKKSLHHP 194 Query: 318 ELVNTLAFLPDSTDQIEALKIREGDAK-----EIIS--------IKNSIAEMKDAEIERS 364 L N L ++I +++ GD ++ I I + K AE Sbjct: 195 LLKNLLDQGKPKDEKIVIREVKIGDEVFEQHLHYLTENKLIRSYIF-DITDRKMAENS-- 251 Query: 365 NKLLSLISYDQESGFIKNMAIIESNN---------NQYLAVGIIKLCGLEAVEAVFGVDE 415 L YD + E + +AV I L G + + G Sbjct: 252 --LHYQAYYDTLTDLPNRSLFYEKLSTALAKAYLEETLIAVMFIDLDGFKNINDTLGHTL 309 Query: 416 RNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKI---AMVNDFDSSFGY 472 ++++ QR+ + + D + +L + +I + + F Sbjct: 310 GDELLGSFAQRLRHNLRSSDILARWGGDEFTILIPQIKNEEEIEICAKRVFSILQQPFQV 369 Query: 473 RNL----RIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENI 528 N + P G++A + + A+ ++ + + ++ E + Sbjct: 370 GNHLLYLKASIGVAIYPRDGQDAETIIKNADAALYRTKEMGRNHYQIYHPLITSKTSERL 429 Query: 529 WIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIG 588 + + A+E + L YQP ++I +AI G EAL RW G++SP KFI IAE+ G Sbjct: 430 EMENLLHQALEKDQFLLHYQPQINIKNQAICGMEALIRWEHPTLGLVSPAKFIPIAEESG 489 Query: 589 FINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLK 648 I +G +++ A + R + ++ + +N+S Q +P+F T I+ E L+ Sbjct: 490 LIISIGEWVLRQACEQNRLWQKKGL--PPVRVAVNLSAQQFQQPNFVNIVTKILAETNLE 547 Query: 649 ANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVD 708 L +EITET I + E + L+ GV IS+DDFGTG S+L +I ++IK+D Sbjct: 548 PQFLELEITETTIMKNLEFSCQIVHDLKHMGVHISMDDFGTGYSSLGYLKQIPFNTIKID 607 Query: 709 SQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQK 766 F D+ I+ + + R + VIAEGVE++ L KL C + QG+ + K Sbjct: 608 QSFIKDLQDKPQDLAIISAVLAIGRGFNVRVIAEGVETQHQVELLRKLECEEMQGFKFSK 667 Query: 767 PMPFSA 772 P+ A Sbjct: 668 PLKPEA 673 >UniRef50_A1SZV0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV0_PSYIN Length = 711 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 105/477 (22%), Positives = 197/477 (41%), Gaps = 38/477 (7%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES----- 388 E G AK + + E+ A+ +++L L +D +G A + Sbjct: 233 EVFYDENGAAKVVSGTVVDVTELTQAQ----DQILQLAHFDSLTGLANRNAFRKRVELAM 288 Query: 389 ----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIV------ 438 AV + L + + G +++++++ +R+ + I Sbjct: 289 ERAKQYGHLGAVLFLDLDNFKRINDTLGHSIGDQLLQEVARRLTDIVRGSDSICGTNFNH 348 Query: 439 --------TFNADLYLLLCREN---VQTFTRKIAMVNDFDSSFGYRNLRI----HKSAIC 483 D + +L E ++N I Sbjct: 349 AIDDNLISRLGGDEFTVLLPEIGKIKDAEHAARRVLNSIGDIINLSGHDIVVTPSIGIAI 408 Query: 484 EPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGEL 543 P GEN S + A+ ++ +++ ++ + + + +RHA++ EL Sbjct: 409 FPHHGENVDSLLKNADAAMYYVKRAGKNDYELFVNSMNVVAKRRLELESFLRHAIDNKEL 468 Query: 544 FLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMG 603 + YQP +DI T I+GAEAL RW SAE G++SP++FI IAE+ G I+ +G +++ A Sbjct: 469 SVNYQPQIDIPTGRIIGAEALLRWNSAELGMVSPVEFIPIAEETGLISPIGEWVLREACR 528 Query: 604 EFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIER 663 + + + + + +N+S Q + + + ++ E GL + L +EITE ++ Sbjct: 529 QVKEWRDDGL--PEIQIAVNISVQQFAKQSLDKLVSKVLLETGLPVHCLELEITENMLMD 586 Query: 664 INEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGK 721 E + +L+ G+ ++IDDFGTG S+L D +K+D F + Sbjct: 587 DVEGAVETLHKLKDLGINLAIDDFGTGYSSLSYLKRFPIDKLKIDRSFITYVTTEPSDAA 646 Query: 722 IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 + + I +A + VIAEGVE L + C + QGY + +P+ S + + Sbjct: 647 VTQAIISMAHNLGLTVIAEGVEEASQLEFLRQHHCEEMQGYYFSRPLIASDMEALLR 703 >UniRef50_C1DCZ4 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCZ4_LARHH Length = 759 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 131/696 (18%), Positives = 245/696 (35%), Gaps = 33/696 (4%) Query: 104 DNKYYLFSRRANDKIVVYHQEQVNGPLVDESGRV----IFADFNPSKRPWSVASDDSNNS 159 Y R + + + LV I+A+ S+ A + S Sbjct: 66 REHLYRSQRSELRDLRAQYDALIEQSLVGIYILKEHTLIYANQRASEMLGYPAGALAGKS 125 Query: 160 WNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFL 219 + S + V + R E +++ + Sbjct: 126 LVDLMPP-GVAHEIGESVRRRHRDNITEQHYVLPLIHRNGHRLSVELHSRLTEFRGERVI 184 Query: 220 KQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNL 279 I+ L + + + + T + + N F Y Sbjct: 185 VGVGLDISARLETERTLQLAATVFENSSEGILLT--DADGTLITVNPAFTRITGYTEEQA 242 Query: 280 LNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIR 339 L ++F + + + EM + P + A+ Sbjct: 243 LGRRSRMFRTDHVGQ--ATNMQMMQSLAEHGHWQGEMFDRHRDGRLYPVWL-SLSAVYDE 299 Query: 340 EGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNN-------Q 392 + + + I+ K AE ++L+ L S+D + + A+ + Q Sbjct: 300 D-RVSNYVGVFTDISRRKAAE----DRLVFLASHDPLTRLLNRDALFRKLEDICLSGIEQ 354 Query: 393 YLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCREN 452 AV I L + + FG + ++R + R++ + D + LL + Sbjct: 355 SFAVLFIDLDRFKLINDSFGHATGDNLLRIVAARLSFVVGSNALLARQGGDEFTLLLEDT 414 Query: 453 VQTFTR---KIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSI 505 Q ++++ N + P G++A + A+ Sbjct: 415 GQRTAVIDMANRLLDELSQPITLENQELHITASIGIALAPEHGKDAATLLRHADTALYRA 474 Query: 506 RDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALC 565 +D + F F + + + +RHA+ +L L YQP +D + + ++G E L Sbjct: 475 KDAGKNTFAFFTHTLHGLSNQRLALENALRHALPRNQLTLAYQPQIDPHRQRLVGVEVLL 534 Query: 566 RWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVS 625 RW E G +SP FI +AE+ G I +G +++TA + + + +N+S Sbjct: 535 RWHHPELGQVSPATFIPLAEETGLILPIGRWVLETACRQLAAWDTAGFSVGH--VAVNLS 592 Query: 626 PWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISID 685 Q N+P ++ ++GL A L +E+TE+ + + +L++ GVR+SID Sbjct: 593 AHQFNDPGLTHHLKAVLSDSGLAARRLELEVTESTLINNPTAAIALMTELKELGVRLSID 652 Query: 686 DFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVE 743 DFGTG S+L + D++K+D F I I I +A+ + V+AEGVE Sbjct: 653 DFGTGYSSLAQLKRFPLDTLKIDRTFVSGIPADASDLAITEAIIAMAKKLSLSVVAEGVE 712 Query: 744 SEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKL 779 + D L + G QGY Y P+ A ++ Sbjct: 713 TADQRDFLARCGSELIQGYFYSPPLAAEALHSFSRM 748 >UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Shewanella RepID=A6WKV6_SHEB8 Length = 921 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 127/580 (21%), Positives = 241/580 (41%), Gaps = 30/580 (5%) Query: 214 DEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFY 273 E + + I+K++ E+L + + ++ V T+ + V N F Sbjct: 349 GEFVGVIGMTRNISKHKEVEEQLTLATNVFKNSVEGVVVTDRHGNITDV--NGAFFEITG 406 Query: 274 YPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQI 333 Y LL + ++F + E+ P I Sbjct: 407 YVREELLGQNPRIFS--SGRHDKAFFDKLWNALLANGKWNGEIWNRRKNGTIFPQ-NITI 463 Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAII------- 386 + GD + +++ I+ K+ E +L L +D + M + Sbjct: 464 STIYDEVGDVRYFVAVFADISAQKENEA----QLTHLAYFDPLTHLPNRMKFMMQLKQEV 519 Query: 387 --ESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 N LA +I + + + FG ++++ +L +R+ + + D Sbjct: 520 RQAKRLNLQLATVMIDVDLFKHINDSFGHSIGDEMLVELAKRLRSQVGDQDVLSRIGGDE 579 Query: 445 YLLLCR--ENVQTFTRKI-AMVNDFDSSFGYRN-----LRIHKSAICEPLQGENAWSYAE 496 ++ L +N + T I + F+ F L P G +A + Sbjct: 580 FVALISGIDNNEDATVAINQLRQVFEQPFIVSTGDHLRLTASMGVSLYPNDGTDADTLLR 639 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 A+ ++ + + F ++ + E++ + + A+E L+L+YQP +D+ +R Sbjct: 640 NADAAMYRAKNDGRNNYAFYTESLTQQSFEHLKLQSALYGAIEQNALYLMYQPKLDLVSR 699 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 +G EAL RW + G+ISP FI +AE IG I+E+G +++TA + + + Sbjct: 700 KTVGFEALLRWHDPQLGLISPAVFIPVAEKIGLIHEIGLWVLETACRQGMRWLREGKHFG 759 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 + +NV+ QL F + ++ E GL A L +E+TE+V+ + + ++++L Sbjct: 760 --RIAVNVAGQQLQRSSFVDDVKRVLAETGLPAKHLELEVTESVMMQNPDLAIRDLKRLG 817 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNR 734 G+ +S+DDFGTG S+L ++ +K+D F DI I + + L + Sbjct: 818 DLGIELSVDDFGTGYSSLNYLKKLPIHKLKIDQSFVRDIPFDTNNTAIAKAVIALGHALK 877 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 + +IAEGVE+++ A L + C QAQGYL+ +P D Sbjct: 878 LDIIAEGVETKEQADFLQQNQCDQAQGYLFSRPQLPEDLD 917 >UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B8HP13_CYAP4 Length = 1094 Score = 683 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 106/496 (21%), Positives = 204/496 (41%), Gaps = 24/496 (4%) Query: 302 YLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEI 361 ++ + + +++ + ++ A++ R+G+ I+ K AE+ Sbjct: 586 FVHSILEQGQVTDFESQVYRKDGSVIWISENARAVRDRQGNILYFEGTVEDISARKQAEL 645 Query: 362 ERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFG 412 + +D +G + LAV + L + + G Sbjct: 646 T----IHYQAFHDLLTGLPNRALFDDRLNQALADARRYQHLLAVFFLDLDRFKVINDTLG 701 Query: 413 VDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCREN---VQTFTRKIAMVNDFDSS 469 +++++++ QR+ + I + D + LL + ++ Sbjct: 702 HAIGDQLLQQVAQRLLPCLREIDTIARWGGDEFTLLLPHVQTPADSVKIAERLLASLKPP 761 Query: 470 FGYRNLRIHK----SAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIE 525 F + +H P GE+ + A+ ++ + + Sbjct: 762 FSLKGHNLHITASLGIALYPHDGEDGTTLLRNADAALYRAKEEGRNGLYCYTPMLNSRGH 821 Query: 526 ENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAE 585 E + + + A+E EL + YQP ++ T IL EAL RW ++ G++SP FI +AE Sbjct: 822 ELLALESELHKALEQQELDVYYQPQINAATGEILRLEALVRWQHSQLGLVSPQTFIGLAE 881 Query: 586 DIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKEN 645 + G I +G +++TA + R + R +N+S Q +PH ++ ++ Sbjct: 882 ENGLIMPIGQWVLETACHQCRQWQARGF--PGLGTAVNLSVRQFQQPHLVQQVAETLQYT 939 Query: 646 GLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSI 705 GL A+ L +EITET + + +L + GV I++DDFG+G S+L + SI Sbjct: 940 GLAADRLELEITETTAMQNVNLTRTLLHELDQMGVGIALDDFGSGYSSLNYLRQFPLHSI 999 Query: 706 KVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYL 763 K+D F ++ + IV+ + L R + V+AEGVES+ + L LGC QGY Sbjct: 1000 KIDRTFIQELPYSVQDQAIVKAVIALGRGLNLSVVAEGVESQSQLKVLRSLGCDIIQGYF 1059 Query: 764 YQKPMPFSAWDKSGKL 779 + P+ +A + + Sbjct: 1060 FGPPIAAAAMTQLLEQ 1075 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 683 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 149/784 (19%), Positives = 281/784 (35%), Gaps = 77/784 (9%) Query: 25 GLFFIINYQLVSERAVKRADSRFE--LIQKNVGYFFKDIERSALTLKDSLYLLKNTEEIQ 82 F ++ + E A+ + +I+ N+ + + ++ + + E++ Sbjct: 76 IPFIFVSGTIGEETAIHSLKNGAADYIIKNNLSRLPSAVTSALERAEEKIMHKRMERELE 135 Query: 83 ---RAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLVDESGRVIF 139 R + M+ +P + + +Y + D + + H++ I Sbjct: 136 NSNRLFRVFMQNLPAIAFIKD--QQGQYIFANASTVDALQLPHEQ-------------II 180 Query: 140 ADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLN 199 + P +A + + F L D+ Sbjct: 181 GKHDTLLFPPQLA--QEMRAAEQQTLAQGEAIQHVRQFPL---------------ADDVK 223 Query: 200 WRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKT 259 L + Q + + I + + A E L++ N I++ T + Sbjct: 224 LWLLTTFPVQ-DMDGNFNHIGGIGIDITEQRKAEEALLLRNH-----AIEASATPILIVD 277 Query: 260 SAVPN------NALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQF 313 P N FE+ Y + + + + + T R Sbjct: 278 VTQPAMPLIYVNRAFELVTGYSSQEAVGRNCRFLQ---GHDREQPELEKIRTAIRERCPG 334 Query: 314 SEMTELVNTLAFLPDSTDQIEALKIREG-DAKEIISIKNSIAEMKDAEIERSNKLLSLIS 372 + L + + + G + + + ++ I E++ + L + Sbjct: 335 YAILRNYRKDGSLFWNELYVAPVPDPHGGEPRYFVGVQKDITEIRQYQ----EALERQAN 390 Query: 373 YDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKL 423 YD +G + E +N +V I + + V G ++++R L Sbjct: 391 YDTLTGLANRNLLKERMQQAISEARRHNWTFSVAFIDIDNFKRVNDSMGHSAGDELIRLL 450 Query: 424 CQRIAEKYAQCCDIVTFNADLYLLLCRE---NVQTFTRKIAMVNDFDSSFGYRNLRI--- 477 QR+ + D ++LL + T + N + F ++ Sbjct: 451 GQRLQSCLRDGDTVARLGGDEFVLLLTSQSLDESIHTVVQRIRNTIINPFIITGRQLTVT 510 Query: 478 -HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRH 536 P G NA + A+ + + F F E+ + + ++ H Sbjct: 511 CSIGLANFPHDGRNADTLLSNADSAMYQAKASGSNNFRFYAKEMNAELGHRLSLENDLWH 570 Query: 537 AMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQ 596 A+E +L L YQP V + I+G EAL RW + G+I PL+FI ++ED G I +G Sbjct: 571 ALENQQLVLHYQPQVCMRNSQIIGMEALIRWQHPKLGMIPPLQFIPLSEDDGLIVPIGIW 630 Query: 597 IIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEI 656 +++TA + R + +N+S QL + ++ +GL L +EI Sbjct: 631 VMETAAHQNRQLQLAGY--PPIRVAVNLSVRQLEQKDLVHCIEKTLQHSGLDPQCLELEI 688 Query: 657 TETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF 716 TE+++ E + + ++ GV++S+DDFGTG S+L + + +K+D F DI Sbjct: 689 TESMLMHNIEESIITLNRISDLGVQLSLDDFGTGYSSLSYLKRLPINRLKIDKSFINDIT 748 Query: 717 G--TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 I R I LA I VIAEGVES D L++ GC + QGYL +P PF + Sbjct: 749 TTYNDAIIARSIIALAHSLEIQVIAEGVESADQYAFLLENGCDEVQGYLLSRPRPFEEME 808 Query: 775 KSGK 778 + Sbjct: 809 ALLR 812 >UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Y8_9PROT Length = 812 Score = 683 bits (1763), Expect = 0.0, Method: Composition-based stats. Identities = 116/627 (18%), Positives = 231/627 (36%), Gaps = 42/627 (6%) Query: 177 FTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKL 236 L + L + V + + D+I ++ + Sbjct: 198 VKLQSTMESMQLSGSMEQFVPVKLEQGEQ--DEIGKLGLAFNQMSEALSNSERSMKLAAS 255 Query: 237 IIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIII 296 I ++ + D E V N F Y + + ++ + Sbjct: 256 IYQSNADAIMVTD-------ENNLIVDVNPAFTRITGYTLDEVRGKNPRI--MQSGKHDN 306 Query: 297 VLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEM 356 E+ + T I L+ +G ++ + I E Sbjct: 307 EFYRHMWQAILNEGHWQGEIWDKRKTGEIYA-KLAHISILRRSDGGVYRHVAQFSDITEK 365 Query: 357 KDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAV 407 K + + +YD + + + N A+ + L + + Sbjct: 366 KQ----KDELIFWQANYDALTCLPNRRLLNDRLAHALAANKRNEDCGALMFLDLDKFKTL 421 Query: 408 EAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTF--------TRK 459 G + ++ ++ +RI + + D +++L Sbjct: 422 NDTLGHAYGDMLLVEVARRIKSCVREVDTVARIGGDEFVVLLENLGADIKDATQAAAHIA 481 Query: 460 IAMVNDFDSSFGYRNL----RIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIF 515 + + + + GE+A ++ +A+ ++ + F Sbjct: 482 EKIRASLSTPYQLHDKMHHSSPSIGVSLIHCNGESAEELIKQADMAMYQAKEAGRNAVRF 541 Query: 516 CDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGII 575 D +E + ++RHA+ +L L YQ +D +T +GAEAL RW+ RG++ Sbjct: 542 FDPQMQQSVETIAALESDLRHAVHERQLQLFYQIQLD-HTHHPVGAEALLRWIHPVRGMV 600 Query: 576 SPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFH 635 SP +FI AE+ I ++G+ ++ A + +S + D +L +N+S Q +P F Sbjct: 601 SPAQFIPFAEESSLILDIGHWVLDEACRQIAAWSHQ-ERTRDLVLAVNISARQFKQPDFV 659 Query: 636 ERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK-QGVRISIDDFGTGLSNL 694 E+ +++++ ++ L +E+TE++ + + LR G+ +S+DDFGTG S+L Sbjct: 660 EQVGAMIRKHAIQPARLKLELTESIALEELDVIITKMHALRNGLGISLSLDDFGTGYSSL 719 Query: 695 KRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELI 752 + D IK+D F D+ +V+ I D+A I VIAEGVE+ L Sbjct: 720 SYLKRLPLDQIKIDQSFVRDMTVDSGDAVMVKTIIDMAHNFGIEVIAEGVETAGQFFLLK 779 Query: 753 KLGCVQAQGYLYQKPMPFSAWDKSGKL 779 + GC+ QGYL+ +P+P ++ + Sbjct: 780 QYGCLLFQGYLFGRPVPLREFEALLQQ 806 >UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AR1_DECAR Length = 655 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 115/577 (19%), Positives = 226/577 (39%), Gaps = 36/577 (6%) Query: 224 EIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNAS 283 + + LA ++LI+ ++ + DS + N+ FE Y G ++ + Sbjct: 90 KRQVEAGLALQRLIVDHASEAMMLTDSA-------QRILSVNSAFEQITGYAGKDVFGKT 142 Query: 284 DKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDA 343 + + E+ + P +I A+ Sbjct: 143 PTMLSAGHQGL--ASHRNVWDFVAENGSWEGEIWDRRKDGTIYPKQ-MRITAICEDGVQL 199 Query: 344 KEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNN---------QYL 394 +++ + I+E + ++ +L L +D + +A+ + L Sbjct: 200 SHFVAVFSDISESRA----QAERLEYLARHDPLTNLPNRLALDAHLDTLLEGATPGINRL 255 Query: 395 AVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQ 454 A+ II L + + G ++++ +L +R+ + + D ++++ + + Sbjct: 256 ALLIIDLDNFKTINDSLGHHAGDRLLSELARRLGAQMDLTKRLFRLGGDEFVVVVDQLIN 315 Query: 455 TFTRKIAMVNDFD----SSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIR 506 I +V + P G +A + A+ + Sbjct: 316 EEAV-IELVQQLAGGIGDPCNIDGHVLHCTSSIGISLYPEDGRDAQALIRNADTAMYYAK 374 Query: 507 DHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCR 566 + + F + + + + + A+ +L L YQP +D+ + ++G EAL R Sbjct: 375 ANGRNNHKFFTEPMNAAANKRLHLESELWCALAENQLVLYYQPQIDLLSGKVVGVEALVR 434 Query: 567 WVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSP 626 W RG+I P +FI +AE+ G I LG+ ++ TA + R + + + +N+S Sbjct: 435 WRHPLRGLIPPAEFIPVAEECGLILPLGHWVLLTACRQAREWLDAGIDMGE--MAVNISA 492 Query: 627 WQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDD 686 Q +P F I+ E GL L +EITE+ I + + QLR G++++IDD Sbjct: 493 HQFRQPEFISSVQAILAETGLPTGRLELEITESTIMHEVDAAIQTLAQLRAMGIKLAIDD 552 Query: 687 FGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK--IVRIIFDLARYNRIPVIAEGVES 744 FGTG S+L D +K+D F D+ +V I L R + ++AEGVE+ Sbjct: 553 FGTGYSSLAYLRRFPLDRLKIDRSFLADVETDPDAASLVTSIVLLGRSLGLQLVAEGVEN 612 Query: 745 EDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVK 781 A L L C + QG+ + +P+ G+ ++ Sbjct: 613 FAQAEFLRTLECERVQGFHFYQPVCAEEVVGVGRFLE 649 >UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n=2 Tax=Proteobacteria RepID=Q2W1Z2_MAGSA Length = 1510 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 109/570 (19%), Positives = 230/570 (40%), Gaps = 34/570 (5%) Query: 226 IAKNQLAREKLI--IYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNAS 283 + + + +L +++ G I + + N F Y ++ + Sbjct: 942 MKHHAEEQLRLAAKVFDRAGEAITITD------SSGNIITVNDSFCRITGYSHQEVIGKN 995 Query: 284 DKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDA 343 + L + E+ P+ + +++ G Sbjct: 996 PRF--LQSGKHGKDFYDAMWRSLIEQGCWQGEIFNRRKNGEIYPEWL-TVNSVRDENGSV 1052 Query: 344 KEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYL 394 ++I + I+ +K ++ ++ L ++D+ +G +++ L Sbjct: 1053 VNYVAIFSDISAIKSSQR----RIEFLATHDELTGIPNRSLLMDRLKHAVAQAKRQKTKL 1108 Query: 395 AVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENV- 453 AV I L + + G D ++++++ +R+ + D ++ + + Sbjct: 1109 AVLFIDLDNFKVINDSLGHDVGDQLLKQATERLKHCVRDSDTLARLGGDEFVAVLTDVSL 1168 Query: 454 -QTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDH 508 + + +V+ +SF + + P G+++ + + A+ ++ Sbjct: 1169 EKVNSVAARIVDFLGASFSINDKSLFVSASIGISVFPDDGQDSLTLLKHADTAMYRAKER 1228 Query: 509 MFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWV 568 +++ F D + + + +R A+E + YQP VDI+T ++GAEAL RW Sbjct: 1229 GRNQYQFFADEMKVIALQRLTLETGLRLALETKSFRMCYQPQVDIHTGEVVGAEALLRWR 1288 Query: 569 SAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQ 628 G +SP FI IAE G I +G + + + ++ ++ + INVS Q Sbjct: 1289 DPTLGEVSPAHFIPIAESCGLIGAIGETVFTMVLEQIAYWREKGLTVP--RIAINVSAHQ 1346 Query: 629 LNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFG 688 L + F + + + +G+ + + +E+TE+ + + + G+++SIDDFG Sbjct: 1347 LRDAGFAAKVGSWLDSSGISSELIGIELTESALMERIDMVKEMLTSFDGMGMKVSIDDFG 1406 Query: 689 TGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESED 746 TG S+L ++ +K+D F I I + I D++R + V+AEGVESE+ Sbjct: 1407 TGYSSLSYLKKLPIHELKIDRSFVDGIALERDDRSIAKAIIDMSRALGMRVVAEGVESEE 1466 Query: 747 VARELIKLGCVQAQGYLYQKPMPFSAWDKS 776 L + GC QGYL+ +P+ A+ K Sbjct: 1467 QLGVLKEEGCDMVQGYLFHRPLSPEAFAKV 1496 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 92/451 (20%), Positives = 175/451 (38%), Gaps = 24/451 (5%) Query: 341 GDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNM---------AIIESNNN 391 G + I + +++AE ++ L +D +G + + ++ Sbjct: 637 GRLRRIRGTAQDVTALREAEA----RIRYLARFDPLTGLLNRSAWQDHAQDVLRHAARHD 692 Query: 392 QYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE 451 AV + L + V G ++++ ++ R+ + D +++L Sbjct: 693 DRCAVLFLDLDDFKTVNDSLGHAAGDRLLAQVACRLGGCVRAEDLVARIGGDEFVILLSR 752 Query: 452 NV---QTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISS 504 + +++ + + P G + + A+ Sbjct: 753 LAHAEEPARVAERVLDALARPLQIDSQPLRVGASIGIALYPADGGEIDTLLKHADTAMYE 812 Query: 505 IRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEAL 564 ++ + + F + + +R A+E G+L L YQP +D + + G EAL Sbjct: 813 AKESGRNAYRFFLPEMTQRVTRRLQTEAELRKAIESGDLRLHYQPQIDAASGRVYGCEAL 872 Query: 565 CRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINV 624 RW ERG++ P +F+ AE G I LG +++ A + + + +N+ Sbjct: 873 VRWQHPERGLLPPDRFVPFAEQSGLIVPLGEWVLREACLQQVRWRDAGL--PPLDVAVNI 930 Query: 625 SPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISI 684 S Q F ++ E G + +EITE+ + + +QL G+ +++ Sbjct: 931 SALQFRRRDFVATVARVLGETGADPARIELEITESALMDATPELVASFDQLVALGLTLAL 990 Query: 685 DDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGV 742 DDFGTG S+L + +K+D F + I LAR + V+AEGV Sbjct: 991 DDFGTGYSSLSYLKRLPLRRLKIDRSFVDGLPDNPEDAAITSATLSLARDLGMEVVAEGV 1050 Query: 743 ESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 E+ED L K GC QGYL+ +P+ + Sbjct: 1051 ETEDQRGYLCKRGCRAMQGYLFSRPLGVEEF 1081 >UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=B1XZW3_LEPCP Length = 1069 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 101/485 (20%), Positives = 189/485 (38%), Gaps = 26/485 (5%) Query: 306 TRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSN 365 + E+ P A++ R G + I + K++E Sbjct: 565 VQTRGSWQGEVRICRRAGGDYPAWLLA-NAVRDRAGHVSHWVCTSIDITDRKESER---- 619 Query: 366 KLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDER 416 ++ L +D + IE Q +AV I L + + G Sbjct: 620 RIRFLAEHDVLTELPNRALCIERLRLALQQARRTGQKVAVLFIDLDRFKNINDSLGHHVG 679 Query: 417 NKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRK----IAMVNDFDSSFGY 472 + ++R + QR+ + + D ++++ ++ G Sbjct: 680 DGLLRSVAQRLVDGVRAGDTVSRLGGDEFVVVLNGLADIEEVAHVVEQRLIPRVRQPHGV 739 Query: 473 RNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENI 528 + I P ++ + +A+ + + F + + Sbjct: 740 QGAEIHVSCSVGISVFPDDAQDIDELMRQADVAMYQAKAQGRNGAQFFTAEMNQRAQARL 799 Query: 529 WIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIG 588 + ++R A+ G+L L YQP + + + G E L RW S E G + P +FI +AE+ G Sbjct: 800 MVENHLRSAVAQGQLSLHYQPRIHVADGRVAGVEGLLRWHSPELGHVPPDRFIPVAEETG 859 Query: 589 FINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLK 648 I E+G +I+ A + + + + + IN+S QL +P + ++ + + Sbjct: 860 LIIEIGAWVIEAACAQIERWRGQGL--QEVAVSINLSALQLRDPGLLDVLRASLERHAVP 917 Query: 649 ANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVD 708 L +E+TE+++ + + + LR+ G+R+SIDDFGTG S+L D +K+D Sbjct: 918 PGQLELELTESILMDQVDAHLVTLHALRELGLRLSIDDFGTGYSSLNYLTRFPIDQLKID 977 Query: 709 SQFTGDIFGTAG--KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQK 766 F D+ I++ I L + V+AEGVE E + L GC + QGY + + Sbjct: 978 RSFVRDMLDDPRDLAIIKAIIGLGHTLGLKVVAEGVERELEVQALRAAGCDELQGYHFAR 1037 Query: 767 PMPFS 771 PM Sbjct: 1038 PMAAD 1042 >UniRef50_C7RQ11 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ11_9PROT Length = 978 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 105/532 (19%), Positives = 199/532 (37%), Gaps = 28/532 (5%) Query: 261 AVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELV 320 + N F Y + + +L L + E+ Sbjct: 303 IISVNPAFSEMTGYTAAEAIGRNPRL--LQSGRHDRAFYQAMWASLTQAGHWQGELWNRR 360 Query: 321 NTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI 380 P + +K G +++ ++++K E +L L YD + Sbjct: 361 ADGEIYPQW-ATLSVVKDEHGQPTHYLAVFTDLSKLKHRE----EELEHLAHYDPLTDLP 415 Query: 381 KNMAII---------ESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKY 431 + + AV +I L + V G ++++ + R+ + Sbjct: 416 NRLLLRSLLQHALERAQRQGGKSAVLVINLDQFKNVNDSLGHALGDELLLGVTARLKARL 475 Query: 432 AQCCDIVTFNADLYLLLCR---ENVQTFTRKIAMVNDFDSSFGY-RNLR----IHKSAIC 483 + AD ++ + + + ++ F Sbjct: 476 RHEDVVGRLGADEFVAILEASQDAENAGSIAGDLLAALAPPFVLADGHETYARASIGISV 535 Query: 484 EPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGEL 543 P G+ A +A+ + +++ F + + + + +R A+ GEL Sbjct: 536 FPQDGKGANDLLRSADVAMHRAKQRGGNQYAFYTGELGHGALQRLEMETALRRALIQGEL 595 Query: 544 FLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMG 603 L YQP +D+ + I+G EAL RW G++ P +FI +AE+ G I +G +I Sbjct: 596 VLHYQPKLDLASGVIVGGEALLRWQRPGFGLVPPYRFIPLAEETGLIVPIGAWVINETCR 655 Query: 604 EFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIER 663 + R +++ + ++ +NVS Q T ++++ + L +E+TE+++ Sbjct: 656 QIRAWAEAG--QPSVMVAVNVSARQFAGGELEAVLATALRKHAVDPRMLGLELTESMLMA 713 Query: 664 INEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGK-- 721 E ++ LR+ GV +++DDFGTG S+L D +K+D F I Sbjct: 714 APEQATERLDALRRVGVAVALDDFGTGYSSLSYLSRFPVDELKIDRSFITHIVSDPKAAN 773 Query: 722 IVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 I + LA + V+AEGVE+E L K C Q QGYL+ P+P + Sbjct: 774 IATAVIALAHRMALKVVAEGVETETQLSYLRKNRCDQIQGYLFSAPVPADEF 825 >UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacteria RepID=A2SDI4_METPP Length = 1006 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 108/475 (22%), Positives = 198/475 (41%), Gaps = 26/475 (5%) Query: 313 FSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLIS 372 E L + + R+G + + + E + + K+ L Sbjct: 519 VRESAALRHRSGRDYGVQISAAPIAGRDGRVLGAVMVFQDVTEAR----GLAQKMSYLAH 574 Query: 373 YDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKL 423 +D +G + + + + AV + L + V G +++++ + Sbjct: 575 HDGLTGLPNRVLFQDRVHQACQSGRRHGRRFAVIFMDLDHFKHVNDSLGHAVGDELLKAV 634 Query: 424 CQRIAEKYAQCCDIVTFNADLYLLLCRE----NVQTFTR-KIAMVNDFDSSFGYRNLRI- 477 QR+ I D +++L + V ++ + Sbjct: 635 AQRLTGALRASDTICRLGGDEFVVLLSDLDDVEVDGVAEVAKKILRQVAQPCVLGGTEVN 694 Query: 478 ---HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNI 534 P GE+ + ++ A+ + + + F A + + + ++ Sbjct: 695 VGASLGIALFPGDGEDPDTLMKRADAAMYRSKREGRNRYHFFSKAVDDAASARLQLEADM 754 Query: 535 RHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELG 594 R A+ G+ + YQP+V TR + EAL RW A +G+ SP FI +AE+ G I +G Sbjct: 755 RRALAAGQFIVHYQPVVHGRTRDAVAVEALLRWDRAGQGLQSPAVFIPVAEESGLIVPMG 814 Query: 595 YQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCV 654 + +++ A + R +S + + +NVSP QL + F + ++ G+ + L Sbjct: 815 HWVLRQACEQLRAWS--GTALGGISVAVNVSPVQLAQADFVDTVADVLHATGVDGSRLEF 872 Query: 655 EITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGD 714 EITE+ + + E + +L+ GVRI+IDDFGTG S+L D++K+D F D Sbjct: 873 EITESTLMQDPEATLEMLRRLKGLGVRIAIDDFGTGYSSLGHLKRFPVDTLKIDHTFVRD 932 Query: 715 I--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKP 767 + ++VR I +AR R+ V+AEGVE+E A L + C QGYL+ +P Sbjct: 933 LEADADDRELVRAILAMARSLRLHVVAEGVETEAQAAILAAMECPAFQGYLFARP 987 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 108/450 (24%), Positives = 201/450 (44%), Gaps = 29/450 (6%) Query: 348 SIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGI 398 + I E K +E E ++ L YD +G +++ N+++ A+ Sbjct: 682 ATVRDITERKKSESE----IVRLAFYDPLTGLPNRRLLMDRLQHALTSNLRNDKHGAILF 737 Query: 399 IKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE------- 451 I L +++ G + ++ ++ QR+ + + D +++L Sbjct: 738 IDLDNFKSLNDTKGHAVGDLLLVEVAQRLKGCVREEDTVARLGGDEFVVLLDNLSHGHDN 797 Query: 452 -NVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIR 506 T ++ + S+ + + ++ A+ + Sbjct: 798 AGAHTKRVAEKILQALNLSYMLQGYEYHSSPSIGVALFCADASSPDELLKRADSAMYQSK 857 Query: 507 DHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCR 566 + F D+ + + + HA+E +L L YQ V+ +GAE L R Sbjct: 858 AAGRNTVRFYDERTQALLLARAELEHALHHALEQQQLMLYYQVQVN-ADYQPVGAEVLLR 916 Query: 567 WVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSP 626 W G+ISP +FI +AE+ G I +GY +++ A + + ++ K D +L +NVS Sbjct: 917 WFHPVLGMISPAQFIPLAEESGMIIPIGYWVLEQACDQLKRWASD-VFKCDLVLAVNVSI 975 Query: 627 WQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDD 686 Q +E F ++ ++ ++G+ + L +EITE+++ E+ ++QL+K G+ S+DD Sbjct: 976 RQFHEADFAQKVQALVTDSGISPDRLKLEITESMLVHDVENIIATMQQLKKIGLNFSMDD 1035 Query: 687 FGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVES 744 FGTG S+L + D +K+D F DI IVR I +A+ ++ +IAEG+E+ Sbjct: 1036 FGTGYSSLSSIKRLPLDQLKIDQSFVRDIGHDEHDKAIVRTIIAMAQSMKLNIIAEGIET 1095 Query: 745 EDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 E R L GC QGYL+ KP+P S ++ Sbjct: 1096 EQQRRLLALKGCTNYQGYLFSKPVPLSDFE 1125 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 28/222 (12%), Positives = 64/222 (28%), Gaps = 32/222 (14%) Query: 195 HVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTE 254 H+D ++ L + + + + E+L + ++ + ++EKL + + + Sbjct: 392 HLDRVYQNLEQRVTERTQELEILNQQIRANLLIS-RESQEKLAASEAHSKRIAEELQYQK 450 Query: 255 YIEKTSAVPN-----------NALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYL 303 + A+ + N F Y L+ + K+ + Sbjct: 451 FALDEHAIVSVTDVTGTITDVNERFCQISQYSREELIGKNHKMLNSGWHPK--GFFKAMY 508 Query: 304 MTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKD-AEIE 362 + E+ + + G + I I+ I E K AE Sbjct: 509 RAITRGQVWNDEVCNRAKDGSLY-WLDMTVVPFMDECGKPYKYIGIRTDITERKKSAEAI 567 Query: 363 RSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGL 404 ++ I +D AV ++ + G Sbjct: 568 ERSEAKLHILFDS----------------NSDAVLMLDMQGF 593 >UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=cellular organisms RepID=B0CAC5_ACAM1 Length = 901 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 98/429 (22%), Positives = 186/429 (43%), Gaps = 22/429 (5%) Query: 361 IERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVF 411 ++ + +D + + + NN +AV + L + + Sbjct: 440 QDKEEIIRHQAFHDALTDLPNRVLFNDRLNIALASAQRNNGSVAVMFMDLDRFKLINDTL 499 Query: 412 GVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCR---ENVQTFTRKIAMVNDFDS 468 G +++++++ R+ + + + D + +L +++ + Sbjct: 500 GHSIGDELLKEVALRLQDCLRDGDTVARWGGDEFTVLLPKIESVNDAINTAYRILDALKA 559 Query: 469 SFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEI 524 +F R + P G+ A + +A+ ++ + Sbjct: 560 AFVIRRHELFVTTSIGIAIYPEDGQEAEILLQNADVALYRSKEQGRGTCQLYNPTMN--A 617 Query: 525 EENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIA 584 +E + ++RHA++ E L YQP V+I T I+G EAL RW E G++SP FI IA Sbjct: 618 KEQFILENSLRHALDRDEFILHYQPKVNICTGEIVGLEALVRWEHPEMGLVSPATFIPIA 677 Query: 585 EDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKE 644 E+ G I ELG +++TA + + + + IN+S Q +P+ E +++ Sbjct: 678 EETGLIVELGEWVLRTACQQAVLWHKLGL--APLSVAINLSARQFYQPNLVEIVAQVIES 735 Query: 645 NGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDS 704 GL L +EITET+ + E + L+ GV I++DDFGTG S+L ++ ++ Sbjct: 736 TGLNPQQLELEITETIAVKNMEFAKSILCNLQALGVHIAMDDFGTGYSSLNYLKQLPFNT 795 Query: 705 IKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGY 762 +K+D F D+ +I+ + L + + V+AEGV++E+ L L C QGY Sbjct: 796 LKIDQSFIQDLKPASKDVEIINAVIALGKGLDLKVVAEGVDNEEQLELLRSLNCEIVQGY 855 Query: 763 LYQKPMPFS 771 L+ +P+ Sbjct: 856 LFSRPLSVD 864 >UniRef50_C7RVM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RVM5_9PROT Length = 708 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 120/601 (19%), Positives = 228/601 (37%), Gaps = 35/601 (5%) Query: 194 IHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDT 253 I+V + + ++ +L++ EV + + E + + + V T Sbjct: 109 INVAIARQRISNFLEREGLRKEVEAQRDRLATLVAELERAEGELSIAAVAFASQNGMVIT 168 Query: 254 EYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQF 313 K + N F Y + + + L + Sbjct: 169 --DPKGVILRVNQSFTRLTGYSAAEAIGRTPAV--LKSGRHDDPFYQRMWNSLVEKGYWQ 224 Query: 314 SEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISY 373 E+ + + I A+ G ++ + I E K AE E + L Y Sbjct: 225 GEIWNKRKSGQIYAE-LLTITAIVASGGITTHYVASFSDITEDKQAEAE----IHRLAYY 279 Query: 374 DQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLC 424 D + + + + Y A+ I L + + G D + ++ ++ Sbjct: 280 DALTRLPNRRLLQDRLGQALAAAARHGLYGALFFIGLDNFKTLNDTRGHDVGDLLLVEVA 339 Query: 425 QRIAEKYAQCCDIVTFNADLYLLLCR------ENVQTFTRKI--AMVNDFDSSFGYRNLR 476 Q + + + + D ++LL + +++ + F Sbjct: 340 QCLRAQVREGDTVARLGGDEFVLLLDGVSGNADEAAAVAKEVGDKLREATSRPFSLDGQE 399 Query: 477 ----IHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIAR 532 + + ++ LA+ ++ F D A ++ + Sbjct: 400 YRCKLSIGVSLFAAL-DTVEELFKRADLALYQAKNAGRDRLRFFDPAMQAAMDLRGALES 458 Query: 533 NIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINE 592 ++ A+ + +L L YQP +D ++G EAL RW +RG++SP +F+ +AE G I Sbjct: 459 DLHQALALDQLRLHYQPQIDTA-GRVIGVEALLRWWHPQRGLVSPNEFVPLAESTGLILP 517 Query: 593 LGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSL 652 +G I++T+ +++ A + +NVS Q + F E+ +K +G L Sbjct: 518 IGRWILETSCVLIKNWESDA-CTRSLQVAVNVSARQFRQADFVEQVKRSLKASGANPARL 576 Query: 653 CVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFT 712 +E+TE+V+ + E + +++ GV S+DDFGTG S+L ++ D +K+D F Sbjct: 577 KLELTESVLLKNVEDTIAKMLAIKRLGVAFSLDDFGTGYSSLSYLAQLPLDQLKIDQSFV 636 Query: 713 GDIFG--TAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPF 770 + G I R I + R + VIAEGVESE + L GC QGYL+ +P+P Sbjct: 637 RKLPGARKEETIARTIITMGRELDMNVIAEGVESEAQRQFLEAHGCHAFQGYLFSRPLPV 696 Query: 771 S 771 Sbjct: 697 E 697 >UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ20_DESAC Length = 814 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 124/647 (19%), Positives = 251/647 (38%), Gaps = 47/647 (7%) Query: 176 SFTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQG--HEIIAKNQLAR 233 +F + ++ + + L L+ S + + Sbjct: 155 AFPFALPVRNSHNQVKGVLTIVLAVSSFTNLLEHASLPQGSFIAVTDHHGLRLFYHPENS 214 Query: 234 EKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLF------ 287 E I + + SAV ++ + +YP + LF Sbjct: 215 ETHPIGQPIAAESWQAAQQARDPGLVSAVASDGRVKRLAFYPMYLNSQTTPYLFMWAGIP 274 Query: 288 --------YLPFAFIIIVLLVVYLMTTRVFR-----RQFSEMTELVNTLA-FLPDSTDQI 333 L + + V+ VV L + + R + L F D Q+ Sbjct: 275 EQQILAPANLEWKINLSVMAVVILFSVLLARFFGQYTLVKPLAALAQASHNFGQDQPWQL 334 Query: 334 EALKIREGDAKEIISIKNSIAEM----KDAEIERSNKLLSLISYDQESGFIKNMAIIES- 388 + + + +++ + ++ + + +++ +L L ++D+ +G +++ Sbjct: 335 PSQYCQPAEIEQLSATFTTMTQRLENSRAIQLQSEQRLEHLATHDELTGLANRTLLLDRL 394 Query: 389 --------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTF 440 + +AV +I L + + G D+ ++++ ++ +R+ + + Sbjct: 395 DHAIEEGMRQHHAVAVLLIDLDRFQVINDSLGHDQGDRLLCQIGKRLCQHVRSTDTVSRL 454 Query: 441 NADLYLLLCRE---NVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWS 493 D + L+ + ++ + S N I P G ++ + Sbjct: 455 GGDEFALVLGDLNNEESLIPLMQDLLKEISSPCHIDNHHIVVTASIGISLFPNDGNDSIT 514 Query: 494 YAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDI 553 LA+ + H +F F + + + +++R A+E GEL L YQP V + Sbjct: 515 LLRNADLAMYQSKRH-KGDFTFYSSDMNQHAVKILELEKDLRQALERGELLLHYQPKVSL 573 Query: 554 NTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRAS 613 + I+G EAL RW RG++SP FI +AE+ G I +G +++ A + + Sbjct: 574 QSGKIVGCEALIRWQHPLRGLVSPADFIPLAEETGLIVPIGTWVLEQACQQAIS--WQQQ 631 Query: 614 LKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIE 673 + +N+S Q + + TI++ L + L +EITE++I E + Sbjct: 632 QLPTITMAVNLSSRQFRHGNLCDVVDTILETTTLHPDLLDLEITESMIMDDPEGAVQTMI 691 Query: 674 QLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLAR 731 L+++GV +S+DDFGTG S+L D +K+D+ F D+ + + I D+A Sbjct: 692 ALKERGVLLSLDDFGTGYSSLNYLRRFPVDCLKIDASFIRDVAQDSSSAAVAVSIVDIAH 751 Query: 732 YNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 + + +AEGVE+ + L K C QGYLY +P+P + + Sbjct: 752 HLGLTTVAEGVETVEQLDFLEKCHCDILQGYLYSRPLPAEDFTSLLR 798 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 99/456 (21%), Positives = 192/456 (42%), Gaps = 25/456 (5%) Query: 334 EALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMA--------- 384 + + + + I I K+ E K+ L +D +G Sbjct: 346 TPVFVDQ-QITGVFMIVRDITNKKEYEA----KINYLAFHDSLTGLPNRRFVEQQLDQVI 400 Query: 385 IIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADL 444 + +Q + V + L + V G D + ++++ R+ E + + D Sbjct: 401 MEAQKTDQQVYVLFLDLDHFKLVNDSLGHDFGDLLLQEASLRLRECVGKKGTVYRLGGDE 460 Query: 445 YLLLCRENVQTF--TRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKL 498 ++++ + + + + + +F + P G++ Sbjct: 461 FMVILTDVTEREVSSMANEINETIEQAFFIHGHELYITTSIGISRYPEDGQDRSVLMRNA 520 Query: 499 KLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAI 558 A+ + +D + F + + + I + A+ E L YQP V + AI Sbjct: 521 DAAMYAAKDKGKNSFHLYVPNLEQAVNDKMNIQNELNRALARQEFLLHYQPQVSAKSGAI 580 Query: 559 LGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDF 618 +G EAL RW ERG++ P +FI++AE+ G I +G +++TA + + + + Sbjct: 581 VGVEALIRWDHPERGLLLPDQFISVAEETGLIVPIGEWVLRTACKQNKQWQDQGL--KPL 638 Query: 619 LLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQ 678 + +N+S Q + F + I+ + L L +EITE+ +++L++ Sbjct: 639 RVAVNLSARQFLKQDFTQMIAEILHQTRLAPEYLELEITESS-MIDVHRATQALKELKQL 697 Query: 679 GVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFDLARYNRIP 736 GV ++IDDFGTG S+L E + +K+D F D+ + IV I +A + ++ Sbjct: 698 GVHVAIDDFGTGYSSLYYLKEFPLNRLKIDRSFVRDMIEQPSNQAIVSTIISMAHHLQMH 757 Query: 737 VIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 VIAEGVE+++ L + C + QGYL+ +P+P Sbjct: 758 VIAEGVETKEELAFLQEHLCEEVQGYLFSRPLPSED 793 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 679 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 100/499 (20%), Positives = 195/499 (39%), Gaps = 33/499 (6%) Query: 298 LLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGD----AKEIISIKNSI 353 LL+ T R E+ + +P + + + G + +I I Sbjct: 326 LLMEAFPTARRDGAWQGEIAARLADGREIP-----VSQVVLAHGGANEMPEFFSTIARDI 380 Query: 354 AEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGL 404 E K E +L ++D +G + + + +++ +V + + Sbjct: 381 TERKHFE----QELRRQATHDALTGLPNRILLEDQIEAVVAHSARSHKLASVLFLDIDNF 436 Query: 405 EAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE--NVQTF-TRKIA 461 + + G + ++R QR+ + + + D + ++ + +V Sbjct: 437 KRINESLGHAAGDAMLRHAAQRLRDCVRPTDVVARYGGDEFTIVLGDLSHVDNIPAILHK 496 Query: 462 MVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCD 517 + F++ + P G++ + + A+ + + + F Sbjct: 497 VRAAFETPLVISGQEVYASFSVGVSVYPHDGDDGATLLKNADTAMYRSKASGRNRYQFYA 556 Query: 518 DAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISP 577 +E + + ++R A++ GE L YQP +D+ I G EAL RW G+I+P Sbjct: 557 PEMNARGQELLSLETDLRRALDRGEFRLHYQPQLDLRDNRIAGVEALLRWKHPRDGVIAP 616 Query: 578 LKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHER 637 F+ + ED G I +G +++ A ++R + + +NVS Q E + Sbjct: 617 GDFVPLLEDTGLIVPVGEWVLRNACTQYRACRESGV--APVRISVNVSARQFREDTLLRQ 674 Query: 638 FTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRF 697 +++E + + L +EITE+ + + L GVR++IDDFGTG S+L Sbjct: 675 VEQVLREECMPPHHLELEITESTAMQDVAATGDILAALDALGVRLAIDDFGTGYSSLAYL 734 Query: 698 YEINPDSIKVDSQFTGDIFGTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLG 755 D++K+D F D A I L + V+AEGVE+ + L + Sbjct: 735 KRFPLDALKIDQAFIRDAPRDANIAAIAEASISLGHKLGLEVVAEGVETAEQLAFLRRRA 794 Query: 756 CVQAQGYLYQKPMPFSAWD 774 C QG+ + +P+P A Sbjct: 795 CDLIQGFHFSRPLPADALT 813 Score = 42.4 bits (99), Expect = 0.071, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 35/139 (25%), Gaps = 4/139 (2%) Query: 232 AREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPF 291 E L+ S+ DSV + T N FE Y + + L Sbjct: 140 QTEHLVRRLSQAVEQAADSVFITDRQGTIQY-VNPSFERLTGYSAAEAIGRTP---ALIK 195 Query: 292 AFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKN 351 + L T + R F E L I L +S Sbjct: 196 SDRHDDAFFHKLWDTILAGRIFQETLVNRRKDGGLFYEEKTIAPLFDEGRGIAGFVSTGR 255 Query: 352 SIAEMKDAEIERSNKLLSL 370 + + E R L L Sbjct: 256 DVTDRIRDEQTRGQLLEIL 274 >UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQI6_9GAMM Length = 955 Score = 679 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 121/581 (20%), Positives = 226/581 (38%), Gaps = 34/581 (5%) Query: 218 FLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGG 277 +++ E I + ++ S G I + + V N F + Sbjct: 386 YIEDVTERIEAENRLNQAAAVFRSTGEGVAITDQNG------TIVDVNEAFTKITGFDRD 439 Query: 278 NLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALK 337 ++ + ++ L I + E+ + P+ I A+ Sbjct: 440 EVIGKNTRI--LQSGKHDIAFYENMWEQIQKHGHWRGEVWNRAKSGTIYPE-ILTISAID 496 Query: 338 IREGD-AKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES-------- 388 ++G + + I +K+ E +L L YD + + E Sbjct: 497 FKKGQQPSGYVGVFADITSLKETEA----RLDHLAHYDALTELPNRLLFRERLIHSLLMS 552 Query: 389 -NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLL 447 +AV + L + + G + ++ ++ R+ + + D + L Sbjct: 553 ERKKTKVAVLFLDLDRFKNINDTLGHGVGDILLAEIASRLRHVVRMGDTVGRISGDEFCL 612 Query: 448 LCRE---NVQTFTRKIAMVNDFDSSFGYRNL----RIHKSAICEPLQGENAWSYAEKLKL 500 + + +++ F + + P +A + Sbjct: 613 ILEDIQDVTDVVPIVEKILSVFSQTIQINSHMLQISASIGVAISPDNSNDADALLSFSDS 672 Query: 501 AISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILG 560 A+ ++ + + F + E+ ++ +R A+E + F+ YQP + I +++G Sbjct: 673 AMYEAKEAGRNTYKFYTAEMTQQALEHSFVQSALRDALEQSQFFVTYQPQLRIKDYSMVG 732 Query: 561 AEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLL 620 EAL RW ERG+I P FI IAE+ G I ELG I++TA + + + Sbjct: 733 VEALVRWQHPERGLIPPDSFIPIAENSGLIRELGAWILRTACEQGVQWLNEQVNFG--RI 790 Query: 621 HINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGV 680 ++NVS QL++ F E +KE G A L +E+TE+ I + +H + ++ G+ Sbjct: 791 YVNVSATQLHDESFTEAVIMCLKETGFPAEKLGLEVTESFIMKDPQHAINVLSSFKEIGI 850 Query: 681 RISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIVRIIFDLARYNRIPVI 738 ++IDDFGTG S+L ++ D +K+D F DI I + + + + VI Sbjct: 851 ELAIDDFGTGYSSLSYLKQLPIDKLKIDQSFIRDIPDDPNDMAIAEAVIAMGKALNLEVI 910 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKL 779 AEGVES+ A L+ C + QGYLY P+ A+ + K Sbjct: 911 AEGVESQIQADFLLDKECTEVQGYLYAHPLTADAFSEWEKQ 951 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 678 bits (1751), Expect = 0.0, Method: Composition-based stats. Identities = 128/664 (19%), Positives = 234/664 (35%), Gaps = 51/664 (7%) Query: 137 VIFADFNPSK--RPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKI 194 VI D+ RPW + W A P + L +N D ++ D Sbjct: 400 VIVEDYLAESTTRPWHAGAR--KFGWRSA---AAFPILRGGQVHLVLNLYDTNVQGFDVK 454 Query: 195 HVDLNWRYLNEYLDQIS-ANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDT 253 DL + E + I A D + + + A + + K Sbjct: 455 MRDL----ITEMVADIGYALDRIDLVAEQARTSAALRESEVK------YRKVLETSQDGF 504 Query: 254 EYIEKTSAV-PNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQ 312 + + + N + + Y L+ + + ++ + Sbjct: 505 WLLNRDWLLTEVNDAYIEFSGYRREELVG----MHVTQLDASDASEMARHIASAVEDGNA 560 Query: 313 FSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLIS 372 E + P ++ G A ++ +A+ + L Sbjct: 561 TFETRHRTKSGELKPVEV----SVTFDAGRAACFSLFVRDLSRRDEAQ----EHIRRLSH 612 Query: 373 YDQESGFIKNMAIIE---------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKL 423 +D +G + + + + L+V I + + + G ++++ ++ Sbjct: 613 FDTLTGLPNSSLFADLLRQAIGNAQRSGESLSVMYIDIDHFQHINDTLGHRIGDRLLVEI 672 Query: 424 CQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTR--KIAMVNDFDSSFGYRNLRI---- 477 R + D +L+L ++ + + Sbjct: 673 AGRFRNALCAENTLARLGGDEFLILLPHAQVECAAHVAEKLIVAAADPMLIEDHEMLVTP 732 Query: 478 HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHA 537 P GE+ + ++ A + + + + F + + +R A Sbjct: 733 SIGIAMYPADGEDFETLLQRADTATNRAKSDGRNTYRFFAPEMQLRSAHTLRLETALRRA 792 Query: 538 MEIGELFLVYQPIVDINT-RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQ 596 +E EL L YQP +D+ + G EAL RW E G++SP +FI IAE G I +G Sbjct: 793 LERNELVLHYQPQIDLVDFGRVAGVEALIRWQHPEFGLVSPAEFIPIAESTGLILPIGEW 852 Query: 597 IIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEI 656 +++TA+ + + + + +N+S Q + + I+ E GL A+ L +E+ Sbjct: 853 VMQTALLQLKAWQLAGLQLG--QVGVNLSAHQFRQQNLPATVARILAEAGLPASCLELEL 910 Query: 657 TETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF 716 TE+ + ++ L + GVR+SIDDFGTG S+L D +K+D F D+ Sbjct: 911 TESAMMDDPVAAVAMMDALHRDGVRMSIDDFGTGYSSLNYLKRFRIDKLKIDQSFVRDLT 970 Query: 717 GTA--GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD 774 IV I LAR R IAEGVE + L GC + QGYL+ +P+P Sbjct: 971 QDPEGEAIVEAIVSLARTLRFRTIAEGVEKPEQLAFLRASGCQEVQGYLFSRPLPPDELA 1030 Query: 775 KSGK 778 + Sbjct: 1031 VWLR 1034 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 678 bits (1751), Expect = 0.0, Method: Composition-based stats. Identities = 114/571 (19%), Positives = 220/571 (38%), Gaps = 35/571 (6%) Query: 224 EIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNAS 283 + + QL+ I NS+ I D + N F Y ++ + Sbjct: 261 RKMVETQLSLASKIFNNSQEGMVITDRNAN-------IIDVNTAFTQITGYRSEEVIGKN 313 Query: 284 DKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDA 343 ++ + E + P I A+ + Sbjct: 314 PRILRSGHHDQ--GFYKQLWHQLETKGQWKGEFINRKKDGSIYPQ-LATISAVMDDKNHL 370 Query: 344 KEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE---------SNNNQYL 394 I + I+ K E KL + YD + ++ N Q Sbjct: 371 INYICVFEDISVRKAHE----EKLQRMAFYDPLTNLPNRTHLLSLLEQHIETGHKNQQTF 426 Query: 395 AVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQ 454 A + + + + G ++++ KL R+ + + D ++++ + Sbjct: 427 ATLFLDIDHFKHINDSMGHFCGDQLLSKLAIRLQDILHLNAHVARIGGDEFVIILPDVHS 486 Query: 455 TFTRKIA---MVNDFDSSFGYRNL-----RIHKSAICEPLQGENAWSYAEKLKLAISSIR 506 +++ F F N P G+++ + + A+ + Sbjct: 487 DVALLETVGDILSVFQQPFDLANHDSLRVSTSIGIALYPRDGQDSETLLKNADTAMYLAK 546 Query: 507 DHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCR 566 + + + F ++ ++ I + A+E +L L +QP ++ AI+G E L R Sbjct: 547 KNGRNGYAFYSPDLTDKSVSHVRIQSALHQAIEKQQLRLEFQPQYNLEQHAIVGVETLLR 606 Query: 567 WVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSP 626 W E G++ P FI IAE G I +G ++ A + + ++ + +NVS Sbjct: 607 WQHPEFGLVPPADFIPIAEKTGLIQSIGEWVLLHACQQGNAWLEQGVEFG--RIAVNVSA 664 Query: 627 WQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDD 686 QL + +F +R + I+ + G A L +EITE+ + + ++ QLR+ G+ IS+DD Sbjct: 665 LQLQQSNFIQRLSDILNQTGFPAQRLDLEITESFLLIDPQQAIASLNQLRELGIEISLDD 724 Query: 687 FGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVES 744 FGTG S+L + + +K+D F D+ + IV I + + + V+AEG+E+ Sbjct: 725 FGTGYSSLSYLKGLPINKLKIDRSFVSDVPSNSDSNAIVNAIIAMGKTLSLKVVAEGIET 784 Query: 745 EDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 ++ A L + GCV QGYL+ +P+ + Sbjct: 785 QEQADYLFEKGCVYGQGYLFSRPVSAEKLFR 815 >UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y791_LEPCP Length = 1066 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 110/539 (20%), Positives = 194/539 (35%), Gaps = 27/539 (5%) Query: 258 KTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMT 317 + V N F Y + S +L L R E+ Sbjct: 522 RPRIVSVNRAFTEITGYSETEAVGMSPRL--LQSGRHEPAFFTRLWNQLLTHGRWQGEVQ 579 Query: 318 ELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQES 377 + ++ +S+ I K+AE +L L +D + Sbjct: 580 NRRKNGELYTQW-MSVSTVRDEHDQPTHYVSVFTDITPQKEAE----QRLQHLAHFDPLT 634 Query: 378 GFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIA 428 + ++ + +AV I L + V G + ++R + R+ Sbjct: 635 QLPNRLMVLSRLEHAIASAARAERRVAVLFIDLDNFKTVNDSLGHSAGDDLLRAVADRLG 694 Query: 429 EKYAQCCDIVTFNADLYLLLCR---ENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSA 481 + + + D ++L+ E ++ ++ F + Sbjct: 695 TRTRREDTLGRLGGDEFILMLEHLREPQDAAQVAQELIGLLETPFRVAGQEVYVQASIGI 754 Query: 482 ICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIG 541 P G A+ + + F ++ + + + +R A+E Sbjct: 755 SLYPDDGLEVGELVRDADAAMYQAKRAGRGVYRFYTESLTTAAQSRLALDTRLRRALENK 814 Query: 542 ELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTA 601 E L YQP+ + R ++G EAL R I P +FI + E+ G I LG + + A Sbjct: 815 EFVLWYQPLYRLADRCLIGLEALVRLNQPGLPPIGPAEFIPLLEETGQITTLGAWVTQEA 874 Query: 602 MGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVI 661 + R + + IN+SP ++ ER ++ +GL A L +E+TE+ + Sbjct: 875 CRQGRAWLDEGLDFG--RIAINLSPQEIRRGQTDERVREALERSGLPAERLELELTESGL 932 Query: 662 ERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--A 719 E + +LR GVR++IDDFGTG S+L +K+D F D+ Sbjct: 933 MEQGERAEAFLHRLRALGVRLAIDDFGTGYSSLAYLKRFPVSKLKIDRSFVRDLPADAND 992 Query: 720 GKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 ++V+ + + R I V+AEGVE+E L LGC AQGY + P P + Sbjct: 993 AQLVQTMVSMGRNLGISVLAEGVETEAQFDYLRSLGCDAAQGYFFSPPRPADEARHWLR 1051 >UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3H4_9PROT Length = 904 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 124/652 (19%), Positives = 242/652 (37%), Gaps = 55/652 (8%) Query: 152 ASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQIS 211 S ++ Y C ++ + T+ + V H ++ IS Sbjct: 279 VLSGSLPIFSMEYPCHSNTEQRWFAMTVAPLWHRK-IRGVVITHTNI-----TNLRQAIS 332 Query: 212 ANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIY 271 ++ +I AR + I S I D+ + N+ E Sbjct: 333 DREQAF---SDIQI----SEARLRTIFDASPDALLISDAQG-------AITMANSRVEEV 378 Query: 272 FYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFS--EMTELVNTLAFLPDS 329 Y +L+ S + + R + L + Sbjct: 379 LGYMAEDLIGQSIEALVPKSVNSAHSEHRSAYIEAPDRRLMLGGRTIKALRKDGSECE-- 436 Query: 330 TDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES- 388 +I ++ I S I+E + AE K+ L +D +G +++ Sbjct: 437 -VEINLSRVDTDQGVMIASALRDISERRRAEG----KIAELSFFDHLTGLPNRTLLMDRM 491 Query: 389 --------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTF 440 + ++ A+ I L +A+ G + ++++R + R+ + + Sbjct: 492 KLAMTASYRDGKHCALLFIDLDNFKALNETLGHEIGDQLLRDIAPRLVASVREDDTVARL 551 Query: 441 NADLYLLLCRENVQTFTRK--------IAMVNDFDSSFGYRNLRI----HKSAICEPLQG 488 D +L+L + +T + + ++ + N A Sbjct: 552 GGDEFLVLLVDLARTESEAANQVEAIGLKIIEALSQPYSLNNQHYVCTPSIGATLFFGH- 610 Query: 489 ENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQ 548 A ++ LA+ + + F D + + I ++R + + L YQ Sbjct: 611 VVADDLLKQSDLAMYKAKAEGGASIHFFDPKMEEAVIKRAKIEADLRQGLIKKQFLLHYQ 670 Query: 549 PIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHF 608 P + + + G EAL RW RG++ P FI +AE+ G I +LG +++ A + + Sbjct: 671 PQI-FSNGRMTGVEALVRWQHPVRGLVPPSDFIPLAEETGLILQLGNWVLEAACKQLAEW 729 Query: 609 SQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHF 668 + R D + +NVS Q ++P F + +++ G L +E+TE+++ + Sbjct: 730 ATR-PELADLTVAVNVSVQQFHQPEFVDHIQEVIRVTGANPERLKLELTESMLAENVQDI 788 Query: 669 YLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRII 726 + L+ G+ S+DDFGTG S+L ++ D +K+D F D+ I + I Sbjct: 789 IKKMFALKADGIGFSLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDVLTDPSDATIAKTI 848 Query: 727 FDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 +LA+ + VIAEGVE+E L GC QGY + +P+P +++ + Sbjct: 849 VNLAQSLGLSVIAEGVETEAQRNFLETSGCHSCQGYFFSRPLPIEEFEEYAR 900 >UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89HX5_BRAJA Length = 799 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 112/469 (23%), Positives = 202/469 (43%), Gaps = 27/469 (5%) Query: 321 NTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI 380 T + + + + + + ++ I E +A+ K+ + +D +G Sbjct: 327 RTTSQVVNRLGRSIRVVNQPMQGGGWVATFEDITEWLEAQA----KISHMARHDALTGLP 382 Query: 381 KNMAIIESN--------NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYA 432 + E + LAV + L + + G + +++++ +R+ Sbjct: 383 NRVLFHEQLEQGLRRTGSGDQLAVLCLDLDHFKDINDSLGHPIGDALLKEVGRRLKATVG 442 Query: 433 QCCDIVTFNADLYLLLC---RENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEP 485 + + D + ++ E +V + + + +I P Sbjct: 443 ESDTVARLGGDEFAVVQIGRSEEAAARCLAGRLVEVISAPYEIDDHQIVIGVSIGISLSP 502 Query: 486 LQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFL 545 G NA + LA+ + + F + + + ++R A++ E Sbjct: 503 QDGSNADELLKNADLALYRAKADGRGTYRFFETGMDARAQARRLLEMDLRAALQRDEFQP 562 Query: 546 VYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEF 605 YQPI D+ + ++ EAL RW +RG+I+P+ FI +AE+ G I +LG ++++A + Sbjct: 563 YYQPIRDVASGRVVVFEALLRWNHPQRGLIAPINFIPLAEETGLIVQLGEFVLRSACTDA 622 Query: 606 RHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERIN 665 + DD + +N+SP Q P+ T + +GL A L +EITE+V+ + + Sbjct: 623 ATW------PDDVDVAVNLSPVQFRNPNLIASVTAALTVSGLPARRLELEITESVLLQNS 676 Query: 666 EHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIV 723 E + +LR GVRIS+DDFGTG S+L D IK+D F ++ + I+ Sbjct: 677 EATLTTLHELRAMGVRISLDDFGTGYSSLSYLRSFPFDKIKIDRSFVSELATREDSMAII 736 Query: 724 RIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 R + L R I AEGVE++ L + GC QAQGYL+ KP P S Sbjct: 737 RAVTGLGRSLGIVTTAEGVENDAQLELLRREGCTQAQGYLFSKPRPASD 785 >UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH Length = 838 Score = 677 bits (1749), Expect = 0.0, Method: Composition-based stats. Identities = 117/540 (21%), Positives = 210/540 (38%), Gaps = 32/540 (5%) Query: 261 AVPNNALFEIYFYYPGGNLLN--ASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTE 318 + + F+I + + S ++ L + L R E Sbjct: 283 IIITDPDFKILRVNHAFSQITGFDSQRVIGLHLGNDLWCGLGGLGYELGTLSRWQGETQR 342 Query: 319 LVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESG 378 L P + ++ G+ + I+E K+AE ++ L YD+ +G Sbjct: 343 LHADGYPYPQWEI-VTPVQDDRGEISHFVICFEDISERKEAER----RIQDLAYYDELTG 397 Query: 379 FIKNMAIIE---------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAE 429 + E S + A+ I L + + G + +++++ R+ Sbjct: 398 LPNRRQLHETLAHAFGEASRDYLIGALLFIDLDHFKTINDSLGHATGDWLLKEVASRLKR 457 Query: 430 KYAQCCDIVTFNADLYLLLCRE--------NVQTFTRKIAMVNDFDSSFGYRNLRIHKSA 481 Q + D ++LL +Q ++++ + + + +H A Sbjct: 458 LVRQGDCLARLGGDEFVLLLPSLSASPPQAEMQADLIAERLISEIAAPYNHAGQVLHIGA 517 Query: 482 I----CEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHA 537 P + + ++ A+ + F D + + + + I +R A Sbjct: 518 SVGITLFPGREQGVDDLLKQADTAMYQAKSAGRKTRRFFDASMQLQADRRLLIHNELRSA 577 Query: 538 MEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQI 597 + EL L YQP + I+G EAL RW R ++SP +FI IAE+ I ++G + Sbjct: 578 LNQQELTLYYQPQHMVEGGDIIGVEALIRWQPPGRALVSPAEFIPIAEETDLIVDIGNWV 637 Query: 598 IKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEIT 657 + A ++ + + +NVS Q + F +R ++ G+ SL +EIT Sbjct: 638 LYEACAQYVRWEENGIHIPQL--SVNVSAKQFHATDFVDRIHDVLASTGMDPASLNLEIT 695 Query: 658 ETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF- 716 E+V+ E + +L+ G+ +IDDFG G S+L + D +K+D F DI Sbjct: 696 ESVVLGHAEDTISKMSELKALGISFAIDDFGAGYSSLSYLKRLPADELKIDRSFIQDIPR 755 Query: 717 -GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 G IV + +AR+ V AEGVES L GC QGYL KP+P ++ Sbjct: 756 DGDNMAIVEAVIAMARHMGFNVTAEGVESRQQLEFLQAQGCHFYQGYLASKPLPVPYLER 815 >UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax=cellular organisms RepID=Q607T2_METCA Length = 1346 Score = 677 bits (1749), Expect = 0.0, Method: Composition-based stats. Identities = 106/541 (19%), Positives = 202/541 (37%), Gaps = 31/541 (5%) Query: 261 AVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELV 320 V N F Y + + L E Sbjct: 807 IVAVNPAFSDMTGYSPEEAVGRTPAF--LQSGRHGKEYYAAMWRAVDQEGSWQGEFWNRR 864 Query: 321 NTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI 380 + I ++ G I + I+ +K+AE + L YD S Sbjct: 865 KNGELFA-VLETIVTVRDETGAMVNYIGVAADISSLKEAE----EHIHHLAYYDPLSALP 919 Query: 381 KNMAIIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKY 431 ++E + LAV + + + V G ++++ ++ +I E Sbjct: 920 NRRYLMERAEYALALAERRKEELAVVFLDVDHFKDVNDSLGHQVGDELLVRVATQIKEFT 979 Query: 432 AQCCDIVTFNADLYLLLCRENVQTFT--RKIAMVNDFDSSFGYRNLRI----HKSAICEP 485 + + D + LL + + ++ F + P Sbjct: 980 RETDTVARLGGDEFALLLPDLGRDAVSQVADKILAALRKPFEHSGQTFAVTGSIGISLYP 1039 Query: 486 LQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFL 545 G + + A+ + ++F F D +I + + +R A+ GEL Sbjct: 1040 HDGTDFETLLRNADTAMYHAKQQGRNQFRFYDPGMNVDILARLTVLSELREAIPAGELRT 1099 Query: 546 VYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEF 605 +QP +D+ ++GAEAL RW RG++SP +FI +AE I + +++ Sbjct: 1100 FFQPEIDLANGTLVGAEALVRWQHPTRGLLSPDQFIPVAESNDLIIAISDWVLEDTCRHL 1159 Query: 606 RHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERIN 665 + + + + +N++ +P R +++ G+ +SL +E+TE+ + + Sbjct: 1160 AQWKKA--DQAPITVGVNLAARHFRDPRLVPRVKSLLCRYGVPGSSLQLELTESTLLDAD 1217 Query: 666 EHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIV 723 + +++L G +SIDDFGTG S+L + ++K+D F DI I Sbjct: 1218 AQTMIVLQELIALGCSLSIDDFGTGYSSLSYLKNLPIATLKIDQSFVRDIAFDADDRTIS 1277 Query: 724 RIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAW-----DKSGK 778 + L + VIAEGVE+E+ R L++ GC QGYL+ +P+ + + + + Sbjct: 1278 GTVVALGHSLGLKVIAEGVETEEQRRILLEQGCDFGQGYLFSRPLSSKEFIKWRMEHALR 1337 Query: 779 L 779 L Sbjct: 1338 L 1338 >UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=23 Tax=Pseudomonas RepID=A4Y0E0_PSEMY Length = 766 Score = 677 bits (1748), Expect = 0.0, Method: Composition-based stats. Identities = 129/657 (19%), Positives = 238/657 (36%), Gaps = 40/657 (6%) Query: 139 FADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVD- 197 + A D+ ++W + DR + + L +D + H D Sbjct: 107 SPSYAALLGLTPQALGDTRDAWAERLHPEDR-ERVLQALALDQQYDSYDNVY-RLRHADG 164 Query: 198 -LNWRYLNEYL--DQISANDEVLFLKQGHEIIAKNQLA-REKLIIYNSEGNYNIIDSVDT 253 W + L D+ + + N + R+ ++++ ++ + Sbjct: 165 TYRWFHSRGRLLRDEGGRPQRFIGIASDITQQRANDESLRQAAAVFDATQEGVLVTDPEQ 224 Query: 254 EYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQF 313 V N F Y +L L L Sbjct: 225 RI------VHVNPAFSRITGYSAEEVLGQHPTL--LKSGRHDAAFYQSLWQALHNRDAWS 276 Query: 314 SEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISY 373 E+ + P I + G +++ + I +K ++ E L L + Sbjct: 277 GEVWNRRKSGEIYPQW-QCIRVIHDEHGRISHYVAVFSDITALKRSQRE----LDYLAHH 331 Query: 374 DQESGFIKNMAIIES------NNNQ---YLAVGIIKLCGLEAVEAVFGVDERNKIVRKLC 424 D S + E + AV +I L + + G + + +++ + Sbjct: 332 DPLSNLPNRLLFTERIAHALERSKSEQLRGAVLLIDLDHFKHINESLGHNVGDLLLKSVG 391 Query: 425 QRIAEKYAQCCDIVTFNADLYLLL---CRENVQTFTRKIAMVNDFDSSFGYRNLRI---- 477 +R+ + C + D + LL C + Q ++ ++ F + Sbjct: 392 ERLQQDLPGGCTLARLGGDEFGLLSETCADAPQAAELAQNLLRCLEAPFRLDEHELYIGA 451 Query: 478 HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHA 537 P ++ A+ + + F + + + +A ++RHA Sbjct: 452 SIGISLFPDDADSVEQVLRNADSALFKAKSSGREGYAFYVQELTDYARQRVELASSLRHA 511 Query: 538 MEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQI 597 ++ EL + YQP+ D+ +G EAL RW +RG+I P +FI IAED G I + + Sbjct: 512 LDNHELRVFYQPLHDLENGNPVGMEALVRWQHPQRGLIPPAEFIPIAEDNGMIGPIDAWV 571 Query: 598 IKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEIT 657 ++ A G+ ++ S + +NVS + + ++ E GL L +E+T Sbjct: 572 LEQACGQMMRWNAEGSALR--FVAVNVSSRLFSRGELDLKVAQVLAETGLSPQQLELEVT 629 Query: 658 ETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG 717 E+ I + + +LR GVR++IDDFGTG S+L R + D +K+D F + Sbjct: 630 ESAIMEDPDAALSLLTRLRALGVRLAIDDFGTGYSSLARLKRLPVDKLKLDQSFVRGLPD 689 Query: 718 T--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSA 772 I R + L + V+AEG+ES L LGC QGY + +P P +A Sbjct: 690 DIEDAAIARAVIALGHSLGLNVLAEGIESPAQVDFLRALGCDYGQGYHFGRPAPVTA 746 >UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAC3_SULNB Length = 813 Score = 677 bits (1748), Expect = 0.0, Method: Composition-based stats. Identities = 172/821 (20%), Positives = 300/821 (36%), Gaps = 72/821 (8%) Query: 11 RLIILFLLAALSFIGLFFIINYQLVSERAVKR-------ADSRFELI----QKNVGYFFK 59 R+ I L A L F+ L F Y+ E + + + S E I Q F + Sbjct: 3 RMKIFILFAVLLFVVL-FYRTYEQYQEISKTQKLIVLHESKSLAEFISSFRQTYQDVFLR 61 Query: 60 DIERSALTLKDSLYLLKNTEEIQRAVI-LKMEMMPFLDSVGLVLDDNKYYLFSRRANDKI 118 + + T + L + TE +R + E++ S NK F + D Sbjct: 62 EHIKITDTSLNLLPVKTITEISERFSSKVNGEIVVRTVSDRPRNPLNKVDRFEAQMIDYF 121 Query: 119 VVYHQEQVNGPLVDESGRVIFADFNPSKRPW-SVASDDSNNSWNPAYNCFDRPGKKCISF 177 + +E+ E+ I + +++ S YN I Sbjct: 122 KSHPEEKYKFLENGETYSFIKPMYIEKSCLRCHGKREEAVPSIRKRYNKAYGYKLGEIRG 181 Query: 178 TLHINGKDHDLLA-------VDKIHVDLNWRYL---------------NEYLDQISANDE 215 +HI KD DL A + L + L EYL+++ + Sbjct: 182 VMHIKIKDRDLFAGLYDNFLSSLLAAILIYVLLLVVIYLLIKRIRHKDKEYLEKLEKD-- 239 Query: 216 VLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYP 275 +++ I K + E L +S+G + S E EK + EI Y Sbjct: 240 ---IEKKTREINKQKETFETLFEKSSDGILIVDGSTFIECNEK--------MVEILKYDS 288 Query: 276 GGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEA 335 LLN F + ++ E V A ++ Sbjct: 289 KEKLLNMHYTSMVPKFQPDGRNSYEKSKEMVLLAKKYKGYQFECVYIRADGEKFLAEVTL 348 Query: 336 LKIREGDAKEIISIKNSIAEMKDAEIERSNK---LLSLISYDQESGFIKNMAIIES---- 388 I G I ++ I++ K A+ E + L +D +G + Sbjct: 349 TPIMLGKRHVIYTVVRDISDKKKAQQELLKQKDILHHQAHHDALTGLPNRTLFSDRLEHG 408 Query: 389 -----NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNAD 443 + LA+ I L + + G +K++ + +R+ K Q + D Sbjct: 409 LKLAERHLGKLALFFIDLDNFKQINDSLGHQIGDKVLVVVSKRLKAKIRQEDTLARLGGD 468 Query: 444 LYLLLCRE--NVQTFTR-KIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAE 496 + ++ +VQ + + + + P +NA + Sbjct: 469 EFTIIMENFKDVQQVSVLAQKIQKVLNQPMHIEGHTLYISCSIGISFYPQDTQNANDLVK 528 Query: 497 KLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTR 556 A+ ++ + F F E + + ++R A++ E L YQP V+ T Sbjct: 529 YADAAMYKAKEEGRNNFQFYSTEMTTLAYERVVMEASLRQAIKNEEFILYYQPQVNAQTS 588 Query: 557 AILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKD 616 + G EAL RW G+I P KFI +AE+ G I E+ +++TAM + R + R D Sbjct: 589 RMTGMEALIRWEHPHLGMILPDKFIPLAEESGLILEIDRWVMRTAMKQVREWYARGL--D 646 Query: 617 DFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLR 676 +L +N+S QL + +F + + + L E+TE + + + ++ +++ Sbjct: 647 PGVLSLNLSMRQLKDENFIDVIKEYLHMMSFEPEWLEFEVTEGQMMKRPDDAVASLGEIK 706 Query: 677 KQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNR 734 G+ I+IDDFGTG S+L + +K+D F I IV+ LA+ Sbjct: 707 SMGISIAIDDFGTGYSSLGYLKRLPVSRLKIDQSFIHGIPEDRENAAIVKATIALAKSLS 766 Query: 735 IPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDK 775 + +IAEGVE+E+ L+ GC+ QGY Y +PM +K Sbjct: 767 LSIIAEGVENEEQKEFLLFNGCISMQGYYYGRPMTADQIEK 807 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 677 bits (1748), Expect = 0.0, Method: Composition-based stats. Identities = 109/442 (24%), Positives = 182/442 (41%), Gaps = 25/442 (5%) Query: 355 EMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--------NNNQYLAVG-IIKLCGLE 405 E K AE +++ L +D +G + E AV + L + Sbjct: 332 ERKRAE----DRISFLAHHDALTGLPNRVLFEEQVDGMLEEIRERDQCAVLAFLDLDNFK 387 Query: 406 AVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC----RENVQTFTRKIA 461 + G +++++ + R+ + +V D +++L +E +R Sbjct: 388 LINDSLGHAAGDELLKAVAGRMRASVRKADFVVRVGGDEFIILLNGLPKERDIVLSRLED 447 Query: 462 MVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCD 517 + + + + C P QG A +A+ ++ Sbjct: 448 IRSAIAMPLQLQGRSLQVSCSMGVACFPNQGRTAGELLANADMAMYRAKELGRDNIQVFT 507 Query: 518 DAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISP 577 + E + +R A+ E L +QP +++ T I AEAL RW RGIISP Sbjct: 508 EEMAARAHERLQWQEELREALAGEEFLLHFQPQMNLGTGRIFAAEALLRWNHPVRGIISP 567 Query: 578 LKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHER 637 FI +AE+ G I +G ++ A + + + ++ +NVS Q E ++ R Sbjct: 568 SVFIPLAEETGLIVPIGDWALRAACRQLKAWQDAGL--PPLIISVNVSARQFRERNWASR 625 Query: 638 FTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRF 697 I+KE GL+A L +E+TE++I + + L GV ++IDDFGTG S+L Sbjct: 626 VAEILKETGLEARYLELELTESLIMQDVPGAIATMHALEAIGVHLAIDDFGTGYSSLSAL 685 Query: 698 YEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLG 755 +K+D F DI I I LA+ + VIAEGVESE L K G Sbjct: 686 KRFPVRRLKIDRSFVTDIPLDADDMAITSAIISLAQKLGLRVIAEGVESEAQVEFLQKAG 745 Query: 756 CVQAQGYLYQKPMPFSAWDKSG 777 C + QGY + +P+ A++ Sbjct: 746 CDEIQGYFFSRPLSAEAFESLL 767 Score = 43.1 bits (101), Expect = 0.045, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 20/77 (25%), Gaps = 3/77 (3%) Query: 308 VFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNK- 366 F + T L+ + G I+ I I + K AE + Sbjct: 119 TGEPIFGIEERAIVTKGRDRWLMTSKVPLRSKSGKIIGIVGISRDITDRKSAERLLEGQA 178 Query: 367 --LLSLISYDQESGFIK 381 L + + F Sbjct: 179 RLLEMIAKGKPLTEFFN 195 >UniRef50_B8GQW3 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GQW3_THISH Length = 926 Score = 677 bits (1748), Expect = 0.0, Method: Composition-based stats. Identities = 152/764 (19%), Positives = 277/764 (36%), Gaps = 75/764 (9%) Query: 42 RADSRFELIQKNVGYFFKDIERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLV 101 A+ + + + D+ +S TL+ L + E A++ E + + Sbjct: 201 LANDEMGDLARTLNALASDLGQSQSTLRQQNLKLNRSVERMEALLRGAEAVLWEAEPATG 260 Query: 102 LDDNKYYLFSRRANDKIVVYHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWN 161 F I+ +Q+ P + E+ D Sbjct: 261 QWR-----FVNGDTQAILGISAQQIGQPGIREAR----------------VHADDLPRLR 299 Query: 162 PAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQ 221 Y P + + N +W +L + + S +D L+ Sbjct: 300 ETYRQAG-PTPSSVDYRYRSNEA--------------SWVWLRDIVSSASDSDGHAVLR- 343 Query: 222 GHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPN----NALFEIYFYYPGG 277 + + + L + +SE Y + +E I +T N +E Y Sbjct: 344 -GLTLDVSPQRQAALALKDSESRYREVIEHVSEVIFRTDHQGRWTLLNPAWEELTGYSIA 402 Query: 278 NLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALK 337 L F ++ L L+ + Q + L+ + + + + Sbjct: 403 ESLGRPVSEFVSAEDSPLLEALTNQLLHG--NKSQLRDELRLLTRAGEPRWVSVFVRSSQ 460 Query: 338 IREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES--------- 388 EG I E K AE ++ L YD + + + Sbjct: 461 DAEGRVIATFGTLTDITERKRAE----EEIRRLAFYDSLTELPNRSLLYDRLRLAMASAA 516 Query: 389 NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL 448 + + A+ + L + + G D ++++R++ R+ + + D ++++ Sbjct: 517 RSRHHGAILFLDLDNFKDINDTLGHDVGDELLRQVASRMQGTIRETDTLARLGGDEFVII 576 Query: 449 C----RENVQTFTRKI----AMVNDFDSSFGYRNLR----IHKSAICEPLQGE-NAWSYA 495 E Q +++ F A GE N Sbjct: 577 LNDLHPEQAQAAVEAETLGSKLLHLLAEPFRLGEHERHCTPSIGATLF-GDGEVNVDELL 635 Query: 496 EKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINT 555 ++ LA+ +D + F + ++ + + R A+ +L L YQP VD + Sbjct: 636 KQADLAMYRAKDSGRNTLCFFEPEMHQVVKARAALEADFRKALREDQLHLHYQPHVD-DQ 694 Query: 556 RAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLK 615 ILGAEAL RW ERG++ P++FI +AE G I +LG +++TA + + + + Sbjct: 695 GHILGAEALLRWSHPERGMVPPMEFIAVAEQTGLIIKLGRWVLQTACQQLALWHRESQWM 754 Query: 616 DDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQL 675 + +NVS Q P F I++ G A L +E+TE+++ E + L Sbjct: 755 R-INMAVNVSAKQFRHPDFVREVAEILQSTGAPAQHLVLELTESLLLEDTETVITRMNAL 813 Query: 676 RKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYN 733 R+ GV ++DDFGTG S+L + +K+D F DI I +I LA+ Sbjct: 814 RELGVGFALDDFGTGYSSLSYLKRLPLSLLKIDQSFVRDILVDANDAAIAEMIITLAKTL 873 Query: 734 RIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 + VIAEGVE+ + L+++GC Q QGYL+ +P P +K Sbjct: 874 GLEVIAEGVETPEQRDFLLEMGCHQFQGYLFGRPGPVDQLEKRL 917 >UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. WCH70 RepID=C5D2J8_GEOSW Length = 568 Score = 677 bits (1748), Expect = 0.0, Method: Composition-based stats. Identities = 117/581 (20%), Positives = 216/581 (37%), Gaps = 35/581 (6%) Query: 217 LFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPG 276 ++ I K I S + I D+ + N FEI Y Sbjct: 1 MYDHDQQLIDIHTFAGIAKNIFEYSNESIIITDAQNRILFV-------NPAFEIVTGYSA 53 Query: 277 GNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEAL 336 ++ + ++ L + E+ + I + Sbjct: 54 EEVIGKNPRI--LQSGMHDKQFYKKMWNDIKQHGVWKGEIWNKRKDGELYLEWL-TISVV 110 Query: 337 KIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI---------IE 387 K ++G+ +++ + I E K +L L YD + + + Sbjct: 111 KDQKGNMTNYVAMFSDITEHKR----NVEQLTRLALYDTLTNVPNRYLLEKRLESIIRMS 166 Query: 388 SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLL 447 +NQ A+ + L + + G + ++++ QR+ + I F D +++ Sbjct: 167 KKHNQSFALLFLDLDRFKNINDTLGHRVGDMLLKETAQRLKRMLRKQDTIARFGGDEFVI 226 Query: 448 LCRENV---QTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKL 500 + + +V F + + I P G + + Sbjct: 227 ILPNLKHIREAAYMAEKIVESLKRPFCFNHQEIYISTSIGISVYPYDGTDKETLIRMADR 286 Query: 501 AISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILG 560 A+ + + +++ ++ + +R A+E GE L YQP +DI T+ I Sbjct: 287 AMYQAKKNGRNQYALYHAGMHGNGKQLFQLETALRKALERGEFELYYQPQLDIKTKQIRA 346 Query: 561 AEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLL 620 EAL RW E+G ISP FI +AE+ G I + I+ A + R + Sbjct: 347 VEALIRWNHPEKGFISPGMFIPLAEESGLITPISDWIMMQACEHLKQLQLRFPY---VKM 403 Query: 621 HINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGV 680 IN+SP + F ++ ++ + + +E+TE+ + E + +L+ G+ Sbjct: 404 SINISPIYFQQIDFLKKLQKTIESVNVNPRLIELELTESAVMPHAEQSVERLTKLKTMGM 463 Query: 681 RISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKIVRIIFDLARYNRIPVI 738 I+IDDFGTG S+L + D +K+D FT + IV+ I +A +I V+ Sbjct: 464 SIAIDDFGTGFSSLSYLHRFPIDILKIDRSFTKQLSRYQQDSAIVKAIIMMAHSLQIRVV 523 Query: 739 AEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKL 779 AEGVE++ + L K C QGY KP+ S + + Sbjct: 524 AEGVETKKQYQILEKQSCDFVQGYYVSKPLSISELYEFLDM 564 >UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GA6_THICR Length = 815 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 124/633 (19%), Positives = 245/633 (38%), Gaps = 38/633 (6%) Query: 175 ISFTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLARE 234 ++ L+ D + K + + +D+ + + + + +N++ Sbjct: 193 LTRRLYAIQTVADEVKQGKRSLRVKLDG----VDEAAQLAKRFNIMLDTLVKRENEIVES 248 Query: 235 KLIIYNSEGNYNIIDSVDTE----YIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLP 290 + SE N I +V+ E + K V +N + L++ + F Sbjct: 249 HQALEQSEKRLNQIMAVNHEGIWDWDIKADKVTHNQSWADMIGLDDNLLVHPAQVFFDAV 308 Query: 291 FAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEAL-KIREGDAKEIISI 349 + + E + D+ + + E + ++ Sbjct: 309 HPDDRERVSRAVGECFKSKSHYHMEYRFVQRNTGKEVWVQDRGDVVEWDAEENPLRMVGG 368 Query: 350 KNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIK 400 + E K AE + +L YD + + + + A+ I Sbjct: 369 FYEVTERKKAE----EAIQNLAFYDPLTQLPNRRLLQDRLQQEMAVTERSKHVCALMFID 424 Query: 401 LCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRE------NVQ 454 L + + G D +K++R++ R+ E + + D ++L+ + Sbjct: 425 LDDFKTLNDTLGHDTGDKLLRQVATRLRENVREFDTVARIGGDEFVLILPSLDDDWKDAA 484 Query: 455 TFTR--KIAMVNDFDSSFGYR----NLRIHKSAICEPLQGENAWSYAEKLKLAISSIRDH 508 T ++ + + + E + LA+ + Sbjct: 485 THAELVAQKVLRVLNKPYLLDSTPYHSTPSIGVKLFSGHQETLEELLKHADLAMYQAKAK 544 Query: 509 MFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWV 568 + F D + + ++R A+ + L YQP ++ + I+GAEAL RW Sbjct: 545 GRNTVRFYDTTMQEVVNAKSVMEASMRQAITGQQFVLFYQPQIN-SNGQIIGAEALVRWR 603 Query: 569 SAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQ 628 ++G+I+P KFI +AE+ GFI +G +++TA + ++++ + +NVS Q Sbjct: 604 HPQKGLIAPNKFIPLAEENGFILSIGRWVLQTACEQLVEWARQ-PATAQITMAVNVSARQ 662 Query: 629 LNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFG 688 ++ E I+ + G L +E+TE+++ + E ++ L+K GV S+DDFG Sbjct: 663 FHQIDLVEEVERIICQTGANPQLLKLELTESLLVKDIEDVVDKMQALKKLGVSFSLDDFG 722 Query: 689 TGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAEGVESED 746 TG S+L + D +K+D F DI I R + LA+ VIAEGVE+ + Sbjct: 723 TGYSSLAYLKRLPLDQLKIDQTFVRDIIDDSNDAAIARAVIALAKSMEFNVIAEGVENIE 782 Query: 747 VARELIKLGCVQAQGYLYQKPMPFSAWDKSGKL 779 + LI +GC QGYL+ +P+P + ++ L Sbjct: 783 QHQMLIDMGCRVFQGYLFGRPVPIEEFFQNTAL 815 >UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Cyanothece RepID=B7JWK6_CYAP8 Length = 1143 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 117/595 (19%), Positives = 225/595 (37%), Gaps = 27/595 (4%) Query: 204 NEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKT-SAV 262 N + L L + + A EG N + V KT ++ Sbjct: 548 NALFNPEGDYMGTLGLITDITKRKRTEQALYD-SEKRLEGILNSLQDVIWSADPKTRQSL 606 Query: 263 PNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNT 322 N ++ + P + D +L LV + + + ++ Sbjct: 607 YLNPAIQLVYGRPMEDF--FRDPHLWLCMVHPEDQELVSHHLKLLEDKGSTEVHYRIIRP 664 Query: 323 LAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKN 382 + + +G + I I + I E K AE +L ++D + Sbjct: 665 DGETRWLHSRSRLVYDEQGKSLRIDGINSDITERKQAE----EQLQYNATHDTLTQLPNR 720 Query: 383 MAIIES------NNNQY----LAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYA 432 + ++ +Y AV + L + + G ++++R++ +R+ + Sbjct: 721 LLFMDRLEHALERRRRYSDPLFAVLFLDLDEFKVINDSLGHALGDELLREIARRLQKSLR 780 Query: 433 QCCDIVTFNADLYLLLCR---ENVQTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEP 485 + D + +L + + D F I Sbjct: 781 ADDTLARLGGDEFTILLEEIHDVKDAIKIAERIHKDLTRPFNLEGQEIFTNTSIGIALSN 840 Query: 486 LQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFL 545 + E A A+ + + + D + + ++R A+E E + Sbjct: 841 GEYEAASEILRDADTAMYRAKAGGKACYAIFDQQMHASAVSRLQLETDLRRAIERQEFLV 900 Query: 546 VYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEF 605 YQPI+ + + G EAL RW ++G++ P +FI IAE+ G I +G I++ A + Sbjct: 901 YYQPIISLQHDTLTGFEALIRWQHPQQGLVPPARFIPIAEETGLIVPIGEWILEQAAQQL 960 Query: 606 RHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERIN 665 + + + + + +N+S QL + I+ + + N+L VEITE+++ Sbjct: 961 KIWQTQYRNYESLKMSVNLSSKQLRDASLLGTIDRILSKTEIDNNALKVEITESILMENV 1020 Query: 666 EHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG--KIV 723 + + LR++ + I +DDFGTG S+L + +++K+D F + +IV Sbjct: 1021 QVAADVLIALRERNIEICLDDFGTGYSSLSYLHRFPVNTLKIDRSFVMRMRPNDENSEIV 1080 Query: 724 RIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 R I LA + +IAEG+E+E +L +GC Q QGY + KP+ S + K Sbjct: 1081 RAIVSLAHILGMEIIAEGIETELQLAQLKWIGCEQGQGYFFAKPLATSEVEALLK 1135 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 107/469 (22%), Positives = 193/469 (41%), Gaps = 23/469 (4%) Query: 334 EALKIREGDAKEIISIKNSIAE---MKDAEIERSNKLLSLISYDQESGFIKNMAIIE--- 387 L+ R+ D I I+E K+ + +L ++ YD +G + + Sbjct: 237 TLLRNRQDDVTGIFLTCRDISENMRQKEDIAYKEMQLEQILHYDTLTGLPQRDFFFDLLH 296 Query: 388 ------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFN 441 NN+ LA+ + L + + G +++++++ QR+ ++ + Sbjct: 297 SHMVGCQKNNRTLALLYLDLDRFKNINDTLGHTVGDQVLQEVAQRLQNNIRITDNLSRMS 356 Query: 442 ADLYLLLCR--ENVQTFTR-KIAMVNDFDSSFGYRNL----RIHKSAICEPLQGENAWSY 494 D +L+ +N+ T+ ++ + P + Sbjct: 357 GDEFLITLDPADNLSEVTQLAQKFLSVISVPMKIEHHRFHLTASIGISLFPGDATSPEKL 416 Query: 495 AEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDIN 554 A+ ++ F F + + +W+ +R A+E +L L YQP D+N Sbjct: 417 LSCADSAMYRAKESGRDAFRFYKPHMNEKAQGLLWLETELRLAIEQEQLELHYQPQYDLN 476 Query: 555 TRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASL 614 T ++G EAL RW E+G+I P +FI AE+ I LG ++ TA + + Sbjct: 477 TGQLVGMEALVRWNHPEKGMIPPGEFIPQAEETSLIIPLGEWVLNTACRQIAAWHAMGI- 535 Query: 615 KDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQ 674 + +N+S Q + ++ GL A L +EITE+V+ E + + Sbjct: 536 -SPIRMAVNISAVQFYRIDLAQMVAKLLDHYGLPATLLELEITESVLMDDVEAAAETMNK 594 Query: 675 LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARY 732 L G+++SIDDFGTG S+L ++K+D F D+ I I LA + Sbjct: 595 LTAMGIQLSIDDFGTGYSSLSYLKRFPISTLKIDRSFINDVTINEQDAAIALSIISLAGH 654 Query: 733 NRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVK 781 I V+AEGVE+ + L + C QGYL+ +P+P ++ K Sbjct: 655 MGIEVLAEGVETVEQLSFLQRHACQYGQGYLFNRPLPAKDIERQLKTAH 703 >UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y6A9_LEPCP Length = 898 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 120/573 (20%), Positives = 217/573 (37%), Gaps = 33/573 (5%) Query: 219 LKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGN 278 ++ E R ++++ N +I + N F Y Sbjct: 330 VQDITERRQAEDEMRLAASVFDNSLNAILIADANGRI------RKVNRAFTAITGYTAEE 383 Query: 279 LLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKI 338 + + +L + + E+ + + I A+ Sbjct: 384 AVGDTPRLMKSGLHSP--GFYGEMWAELQACGKWDGELMNQCKD-GRIISVRESIAAVHD 440 Query: 339 REGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES---------N 389 G I I + I E K + + ++ L YD +G +++ Sbjct: 441 PAGAVAYYIGIFHDITEQKAS----AQRIHQLAYYDVLTGLPNRALLMDRCQHELARAMR 496 Query: 390 NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLC 449 + + LAV + L + + G + ++R + QR+ I D +++L Sbjct: 497 DGKRLAVLFLDLDRFKHINDSLGHPVGDGLLRAVAQRLQGTLRDSDTIARLGGDEFIVLL 556 Query: 450 RENVQTFT---RKIAMVNDFDSSFGYRNLRIHKS----AICEPLQGENAWSYAEKLKLAI 502 + +++ F F R+ P + S + LA+ Sbjct: 557 EHVETSAGVELAARRILDAFRDPFQLEEHRLSVGASVGISLFPDHASDITSLFKYADLAL 616 Query: 503 SSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAE 562 + +F F + + ++ + + R +R A+E +L L YQP+ + + GAE Sbjct: 617 YQAKAAGRGDFRFFEPRFNDAAKDRMRLERELRQALERNQLSLQYQPVFALPDGRLAGAE 676 Query: 563 ALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHI 622 AL RW G +SP FI IAED G I +G +++ A + R + D ++ + Sbjct: 677 ALLRWTHPALGSVSPATFIPIAEDSGLIVPIGAWVLEQACRQARQWLDAGL--DPGVIAV 734 Query: 623 NVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRI 682 N+S Q+ + ++++ GL A L +EI+E+ I R E + QLR GV + Sbjct: 735 NLSGMQIQRNDLVDTVSSVLARTGLPACHLELEISESYITRHAESDLQRLGQLRALGVSM 794 Query: 683 SIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAE 740 +IDDFGTG ++L + +K+D F DI A + R I L + V+AE Sbjct: 795 AIDDFGTGQTSLGHLRRLPVSKLKIDRSFMADIEHDAAAAAVTRAIIGLGHGLGLTVVAE 854 Query: 741 GVESEDVARELIKLGCVQAQGYLYQKPMPFSAW 773 GVES L+ C QG+ Y +P+ + Sbjct: 855 GVESAAQESALVAQHCDLVQGFRYARPLDAPVF 887 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 676 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 96/439 (21%), Positives = 180/439 (41%), Gaps = 20/439 (4%) Query: 359 AEIERSNKLLSLISYDQESGFIKNMAIIES---------NNNQYLAVGIIKLCGLEAVEA 409 A+ + + +D + + E + L V + L + V Sbjct: 423 AQKRVESIIRYQACHDALTHLPNRLLFDEQLALALANSKQQPELLGVAFLDLDRFKVVND 482 Query: 410 VFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLL---CRENVQTFTRKIAMVNDF 466 G +++++++ R+ + C I + D + LL + +++ Sbjct: 483 TLGHGIGDQLLQQVATRLKQCLRNCDTIARWGGDEFTLLFPHLTSTDEITKIAHRILDKL 542 Query: 467 DSSFGYRNLRI----HKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLN 522 F N + P E+A + + A+ + + F + Sbjct: 543 SIPFVIDNQELYVTASLGIALCPYDAEDAQTLLKHADAAMYRAKKQGRNNFQVFAEEMHR 602 Query: 523 EIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFIT 582 E + + ++R A+ E L YQP V+I+T I+G EAL RW G + P +FI Sbjct: 603 EALNQLTLEADLRRALIKEEFLLYYQPQVEISTGKIVGLEALIRWQHPTLGFVPPDQFIP 662 Query: 583 IAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIM 642 +AE+IG I +G +++TA + + + + +N+S Q ++ + Sbjct: 663 LAEEIGLIAPIGQWVLQTACIQHQSWQAEGL--PPVRIAVNLSARQFHQSQLINIILQTL 720 Query: 643 KENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINP 702 + + L +EITE+ + E +++LR+ G+ I+IDDFGTG S+L Sbjct: 721 ETTEIDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITIDDFGTGYSSLNVLKHFPL 780 Query: 703 DSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQ 760 +++K+D F DI I + I L++ ++ V+AEGVE+ L + C AQ Sbjct: 781 NTLKIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGVETPQQLSFLRSIHCDLAQ 840 Query: 761 GYLYQKPMPFSAWDKSGKL 779 GY + P+P K + Sbjct: 841 GYYFCPPVPAIEIAKLLRQ 859 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 676 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 132/635 (20%), Positives = 247/635 (38%), Gaps = 63/635 (9%) Query: 198 LNWRYLNEYLDQISAND-EVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYI 256 L W + + + +++ + + K A + +I N + V ++ Sbjct: 300 LFWTQIRGNIISSNEPGLGYIWIVEDIDQQVKADEALK--VILNEQNLILDYAMVGIVFL 357 Query: 257 EKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEM 316 + S N FE F Y G L +S + +YL + F + Sbjct: 358 KNRSVTRCNQRFEEMFGYNAGELAGSSSRQWYLTEQDWKAA--GKACYKPLSQGKVFQDE 415 Query: 317 TELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIE-------------- 362 L P + + AK I I I E K A++ Sbjct: 416 MLLSRKDGS-PIWCEVTSKAIDPDDLAKGSIWITMDITERKAADVALARAHEDLELRVKE 474 Query: 363 ---------------------RSNKLLSLISYDQESGFIKNMAIIESN---------NNQ 392 ++ + +D +G + + E + Sbjct: 475 RTKELAKANMDLLVEINERKMAEERVKHMALHDALTGLPNRLLLEERLENALSDAKSHQW 534 Query: 393 YLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCREN 452 LAV I L + V G E ++++ ++ R+ + + D ++++ E Sbjct: 535 QLAVLFIDLDRFKLVNDTLGHHEGDQLLVEVANRLHQVIGANDTVARLGGDEFVIVLNEI 594 Query: 453 VQTFTRKIAMVNDFDSSFG------YRNLRI--HKSAICEPLQGENAWSYAEKLKLAISS 504 + T ++ D +F +++ + P GE + A+ Sbjct: 595 AGS-TEINGVIEDIQQNFKPAVKLALQDMFVTPSIGVAIYPEDGETPVQLMKNADAAMYH 653 Query: 505 IRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEAL 564 + + + + + + ++E I + + A+++G+ L YQP +D+ + I+GAEAL Sbjct: 654 AKASGRNCAQYFNRSLDDSLKERISLENALNQALKLGQFELYYQPQLDVKSNRIIGAEAL 713 Query: 565 CRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINV 624 RW E+G+ISP FI +AE+ G I ++G ++ A + + ++ D + +N+ Sbjct: 714 IRWNHPEKGMISPDAFIPLAEESGLIVDIGSWVLHQASSQLAQWRKQGF--DQLSVSVNL 771 Query: 625 SPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISI 684 S Q+ + F +++E G+ L +E+TE++I R E ++++ G++IS+ Sbjct: 772 SALQVQKESFAREVADVIREYGVPEACLDLELTESMIMRNAEETIAALDKIHNLGIQISV 831 Query: 685 DDFGTGLSNLKRFYEINPDSIKVDSQFTGDI--FGTAGKIVRIIFDLARYNRIPVIAEGV 742 DDFGTG S+L D +K+D F DI I + I +A + VIAEGV Sbjct: 832 DDFGTGYSSLSYLKRFPLDKLKIDRSFVQDITVDTDDAMICKTIISMAHNLNLQVIAEGV 891 Query: 743 ESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSG 777 E+ L GC Q QGYL+ KP+P + Sbjct: 892 ETNAQLELLRDYGCEQYQGYLFAKPLPVEQMTEHL 926 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 110/453 (24%), Positives = 201/453 (44%), Gaps = 20/453 (4%) Query: 332 QIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAI---IES 388 I + +G + I+ + I+E K E ++ L D +G M++ +E Sbjct: 395 TITTVTGEDGRVECYINTFSDISERKANEA----RIHDLAHTDTLTGLPNRMSLYSGLEE 450 Query: 389 N--NNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYL 446 N Q + V I+ L + + G ++++ ++ +R+ + + D ++ Sbjct: 451 RLANVQPIGVMILDLDNFKIINDTLGHHVGDQLLVEVARRLVCCVGEQGMVARLGGDEFV 510 Query: 447 LLC--RENVQTFTRKIA-MVNDFDSSFGYRNLRIHKSAICE----PLQGENAWSYAEKLK 499 ++ + Q R ++ + +H S+ P G + +S + + Sbjct: 511 IVLDCPQATQIVGRVAKEVLQRLAQPYLIEGYELHSSSSIGIGVSPHDGSDPYSLLKNID 570 Query: 500 LAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAIL 559 A+ + + + F F + +I E + + ++R A+ E L YQP VD+ T I+ Sbjct: 571 TAMYAAKSSGKNNFKFFTEKMREQINERMQMENHLRQAILRNEFELHYQPQVDLGTGRII 630 Query: 560 GAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFL 619 G EAL RW E G++ P KFI +AE+ + LG ++ A + +S++ Sbjct: 631 GMEALVRWNHPEWGMVHPEKFIRVAEECNLVIPLGEWVLCEACRQISQWSRQGLEA--VC 688 Query: 620 LHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQG 679 + +N+S QL + +M + +K L +EITE+ + E +++L+ +G Sbjct: 689 ISVNISARQLKSRYLFTLIDNLMMTHQIKPGMLELEITESAVMDDPEQTIPRMKELKNKG 748 Query: 680 VRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGT--AGKIVRIIFDLARYNRIPV 737 V ++IDDFGTG S+L + +K+D F DI I LAR + + Sbjct: 749 VALAIDDFGTGYSSLSYLKLLPLTRLKIDRSFVKDIETDPNDAAICAATIALARTLGLGL 808 Query: 738 IAEGVESEDVARELIKLGCVQAQGYLYQKPMPF 770 +AEGVE+E L GC AQGY + KP+P Sbjct: 809 VAEGVETEAQLEYLRAQGCDSAQGYYFSKPLPA 841 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 676 bits (1744), Expect = 0.0, Method: Composition-based stats. Identities = 113/529 (21%), Positives = 215/529 (40%), Gaps = 26/529 (4%) Query: 261 AVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELV 320 + N Y L S P + L M + + + + Sbjct: 164 FLKVNPALCEMLGYSENELFGVSVLDITHPTDIELTERLFAEAMGGQTRSHDYEKRY--I 221 Query: 321 NTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFI 380 + +G +++ ++I A K+ L +D +G Sbjct: 222 RRDGETLWAHVSTSWHYNEDGTPSYSVALISNITPHHQA----KQKIRQLAYFDGLTGLP 277 Query: 381 KNMAIIE---------SNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKY 431 +E N L V II + + V +G + + +++ + QR+++ Sbjct: 278 NRQLFLEHCNSSLTQARRNRSPLGVCIIDIDRFKGVNDTYGYESGDALLKTVSQRLSDCM 337 Query: 432 AQCCDIVTFNADLYLLLCRE---NVQTFTRKIAMVNDFDSSFGYRNLRIH----KSAICE 484 ++ + +D + + + M++ +++ Sbjct: 338 SREDVLARLGSDEFAAVIASVGSQDEFSVLAQKMLHCLTEPIQIGEQKLYCSGGMGIALF 397 Query: 485 PLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELF 544 P+ G +A + + A+ + H + F F E I I +R A+++ +L Sbjct: 398 PVDGVDAEALLKNAATAMHQAKQHGSNNFRFFSKGMNRMAWERIEIETGLRRALDLQQLA 457 Query: 545 LVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGE 604 L YQP VD+ T I+G EAL RW S E G +SP++FI +AE+ G I +G ++++A + Sbjct: 458 LHYQPQVDLKTGHIIGMEALLRWESPELGRVSPMRFIPLAEETGLILPIGNWVLESACRQ 517 Query: 605 FRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERI 664 + + + + +N+S Q + F +R I++ +G+ L +E+TE++I Sbjct: 518 AKAWHRAGF--PSLRMAVNISARQFKQAGFIDRLDAIIQRSGINPELLEMELTESLIMEK 575 Query: 665 NEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIF--GTAGKI 722 ++ + + ++ +G++++IDDFGTG S L D IKVD F DI I Sbjct: 576 SDETLMTLVDIKSRGIKLAIDDFGTGYSMLSYLKHFPIDRIKVDRSFVRDIPENTDDAAI 635 Query: 723 VRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFS 771 I +A +I VIAEG+E+ + L C + QGY + +P+P Sbjct: 636 TEAIIAMAHSLKIEVIAEGIETREQLAFLKDRACEEGQGYYFGRPVPVE 684 >UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K2X7_AZOSB Length = 1070 Score = 676 bits (1744), Expect = 0.0, Method: Composition-based stats. Identities = 115/532 (21%), Positives = 210/532 (39%), Gaps = 32/532 (6%) Query: 265 NALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLA 324 N E L++A + + L V + E Sbjct: 549 NPAAERILGMARALLVDAPAPALTVFAPGALAELGVALVCGRETHLEVEGE-----RADG 603 Query: 325 FLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMA 384 + ++ GDA ++ + + E + +L YD +G Sbjct: 604 SPFWCECALAPVR-AAGDA-HVVCVVKDVTER----VLYLRELERQAKYDGLTGLPNRYL 657 Query: 385 IIES---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCC 435 + + + + L V I L + V G + ++++R+ R+A Sbjct: 658 LDDRLEQAIVAARRHERLLGVAFIDLDHFKVVNDNVGHRQGDELLRQAASRLAAVLRDGD 717 Query: 436 DIVTFNADLYLLLCRE---NVQTFTRKIAMVNDFDSSFGYRN----LRIHKSAICEPLQG 488 D +++L + F + F + + P G Sbjct: 718 TAARQGGDEFVVLLPDLGDERDAFRILGRLQAALAEPFRLDDRSFFVTCSIGVSLYPRDG 777 Query: 489 ENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQ 548 + + + +A+ + + F ++ + + + +R A+E GEL L +Q Sbjct: 778 GDGDTLLKHADIAMYQAKAAGRNVVRFFTAEMNIQVRDRLQLEGALRSALENGELHLAFQ 837 Query: 549 PIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHF 608 P VD + ++GAEAL RW E G + P++FI +AE+ G I +G +++ A + R + Sbjct: 838 PQVDGGSGQVIGAEALLRWQHPELGAVPPVRFIPLAEETGLIGPIGEWVLRAACRQARQW 897 Query: 609 SQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHF 668 Q + +NVS Q P R I+ E GL L +E+TE+++ E Sbjct: 898 EQAG---RRLRIAVNVSARQFRSPDLPARIAEILDETGLPPALLELELTESMLMGDAEQA 954 Query: 669 YLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRII 726 + +L++ GV +++DDFGTG S+ D++K+D F + IV I Sbjct: 955 EEMLHRLKQLGVSLALDDFGTGYSSFAYLQRFPIDTLKIDQSFVRSMVAGVRGEAIVVAI 1014 Query: 727 FDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGK 778 LA + VIAEGVE+ R+L + GC + QGYL+ +P+P + + +G+ Sbjct: 1015 IALAHSLGMRVIAEGVETPLQQRQLFEFGCDELQGYLFGRPVPAAEFPHAGR 1066 >UniRef50_B8HNE5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HNE5_CYAP4 Length = 877 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 113/534 (21%), Positives = 226/534 (42%), Gaps = 26/534 (4%) Query: 268 FEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLP 327 ++ Y + N ++ F + + + + + F E L + Sbjct: 340 WKTILGYSESEVDNCLEEWFSRIHPQDLERVKLKLNLHQQGQSSHFEEEYRLRHKNGKYR 399 Query: 328 DSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIE 387 + A++ EG A + + I+E + A+ +L+ +D +G ++ Sbjct: 400 WVLSRGIAVRNSEGKAYRMAGSLSDISEQRLAQ----EQLMHDALHDPLTGLPNRTLFMD 455 Query: 388 S----------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDI 437 + N AV + L + + G + ++ +L R + Sbjct: 456 RLRQVIHHARRHRNYNFAVLFVDLDRFKVINDSLGHLAGDTLLIELAHRFQIGLRPDDTV 515 Query: 438 VTFNADLYLLLCRENVQ---TFTRKIAMVNDFDSSFGYRNLRIHKSAICE--PLQGEN-- 490 D +++L + ++ + + F + SA P + Sbjct: 516 ARLGGDEFVILLDDLLEVEESIRIAHRIQTLVQQPFIINGQTVFTSASIGIAPKDTHHHK 575 Query: 491 AWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPI 550 Y +A+ + S + + + ++R A+E EL L YQPI Sbjct: 576 PEHYLRNADIAMYRAKAAGGSRHVLFTSVMHTSALVRLQLETDLRQALERQELRLQYQPI 635 Query: 551 VDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQ 610 + +NT I+G EAL RW G+I+P FIT+AE+ G I +G +++ A + + + Sbjct: 636 LCLNTDQIVGFEALVRWQHPRDGLIAPGHFITVAEETGLIVPIGEWVLQEACRQMQCWHT 695 Query: 611 RASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYL 670 + ++ +N+S QL++P ++ ++ E GL+ L +EITE++I E Sbjct: 696 QFGQVLPLMVSVNLSSKQLSQPDLLQQVDRMLAETGLRPQQLKLEITESMILDNTEVARQ 755 Query: 671 NIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFG--TAGKIVRIIFD 728 + +L+++ +++S+DDFGTG S+L + + D +K+D F ++ + ++VR I Sbjct: 756 TLLKLKERQIQLSMDDFGTGYSSLNYLHRLPIDLLKIDRSFIHEMDSGEESRELVRAIIS 815 Query: 729 LARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM---PFSAWDKSGKL 779 +A ++ VIAEG+E+ +L +LGC QGYL+ P+ P + + + L Sbjct: 816 IAHSLKMQVIAEGIETRSQLEQLHELGCEFGQGYLFSTPLDPEPAADFLQQAFL 869 >UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XRM5_DESMR Length = 821 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 125/578 (21%), Positives = 231/578 (39%), Gaps = 30/578 (5%) Query: 212 ANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDT--EYIEKTSAVPNNALFE 269 A+ V + + I + A E+L + + +S + + V N FE Sbjct: 233 ADGAVAYYEGTVVDITDRKRAEEQLAAQRAYFDQLFANSPQAIALIDMRRNIVDVNHAFE 292 Query: 270 IYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDS 329 F + + + + +P + + + + E +P S Sbjct: 293 DLFGFKAAEIKGYGMRAYIVPKHLLGECESTRGAILS--GKPMVRETFRQHRDGRLIPVS 350 Query: 330 TDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIES- 388 I G + I+ I I+E K E ++ +D +G + Sbjct: 351 M--IGFPIEFGGQPQGIVYIYQDISERKAFE----EQITHQAFHDALTGLPNRSLFADRL 404 Query: 389 ---------NNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVT 439 + AV +I L + + G ++++ ++ +R+ + Sbjct: 405 DRALTRARRRGDYQYAVLMIDLNKFKGINDTLGHQAGDQLLVEVSRRLMACVRSMDTVAR 464 Query: 440 FNADLYLLLCRENV---QTFTRKIAMVNDFDSSFGYRNLRI----HKSAICEPLQGENAW 492 D + ++ E + + + + ++ Sbjct: 465 LGGDEFAVILEELKSKKEVMAVVDRIGAALGKPCMLCGTTVTPGASVGIVLRTRDYQSPE 524 Query: 493 SYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVD 552 +A+ ++ D EI + I + ++R A++ GEL L YQPIVD Sbjct: 525 DILRDADIAMYRAKESGRPSM-IFDRRMHQEILDAINLEADLRAALDRGELLLHYQPIVD 583 Query: 553 INTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRA 612 + T I G EAL RW +RG++ P++FI +AE+ G I LG +I A + R + Sbjct: 584 VQTGRIEGFEALVRWDHPDRGLVPPVQFIPLAEETGLIQPLGRFVIAEACRQLRAWQLEL 643 Query: 613 SLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNI 672 + + +NVS Q + + +++ GL L +EITE+V+ +H + Sbjct: 644 PEAEQLSVSVNVSCHQFVKEGLVDHVAGVLETTGLDPACLKLEITESVLMHDAQHTAGEL 703 Query: 673 EQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTG--DIFGTAGKIVRIIFDLA 730 +L+ GV+I+IDDFGTG S+L ++ D +K+D F D+ G + +IV+ I LA Sbjct: 704 SRLKALGVKIAIDDFGTGYSSLSYLRQLPIDHLKIDRSFISGDDVNGESQEIVKSIIALA 763 Query: 731 RYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPM 768 R + VIAEGVE +D +L C +AQG+++ +P+ Sbjct: 764 RSLGLTVIAEGVEHQDQLDKLRNADCDKAQGFMFSRPV 801 Score = 45.4 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 53/164 (32%), Gaps = 13/164 (7%) Query: 216 VLFLKQGHEIIAKNQL---AREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYF 272 V+F A+ QL R+ I+ + + Y+E + F+ Sbjct: 114 VIFRDISGRRRAEEQLDAAERKYRAIFENAVEGIFQTTPGGRYLEVNRTLARIYGFDSVD 173 Query: 273 YYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQ 332 + + ++L+ P V L R S + + ++ ++ ++ Sbjct: 174 EMTE-HFRDIKNQLYVEPKRRDDF---VRELSAHDQVRNFESAIHKKDGSVIWISENA-- 227 Query: 333 IEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQE 376 ++ +G I + K AE + + + +DQ Sbjct: 228 -RVVRDADGAVAYYEGTVVDITDRKRAEEQLAAQ---RAYFDQL 267 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.174 0.616 Lambda K H 0.267 0.0533 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,469,523,284 Number of Sequences: 3077464 Number of extensions: 359090073 Number of successful extensions: 871243 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 22280 Number of HSP's successfully gapped in prelim test: 3135 Number of HSP's that attempted gapping in prelim test: 766636 Number of HSP's gapped (non-prelim): 35674 length of query: 782 length of database: 1,040,396,356 effective HSP length: 137 effective length of query: 645 effective length of database: 618,783,788 effective search space: 399115543260 effective search space used: 399115543260 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 98 (42.0 bits)