1 c1nijA_ Probab=100.00  E-value=0  Score=473.09  Aligned_columns=297  Identities=25%

Q ss_pred             EEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             33888607999884489999997344688189998176444405889741796199977986345556899999999986
Q batch____         2 TRTNLITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGIDGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLLR   81 (328)
Q Consensus         2 i~VtiitGfLGsGKTTll~~ll~~~~~~~~~avi~ne~g~~~iD~~ll~~~~~~v~el~~GCiCC~~~~~l~~~l~~l~~   81 (328)
                      ||||||||||||||||||+++|++ +++.|+|||+||||+++||+.++.+.+.++.+|.|||+||+.++++..+|.++..
T Consensus         3 ipv~iitGfLGaGKTTll~~ll~~-~~~~~~avi~Nefg~~~iD~~ll~~~~~~v~~l~~GCiCC~~~~~~~~~l~~l~~   81 (317)
T c1nijA_           3 IAVTLLTGFLGAGKTTLLRHILNE-QHGYKIAVIENEFGEVSVDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLLD   81 (317)
T ss_dssp             EEEEEEEESSSSSCHHHHHHHHHS-CCCCCEEEECSSCCSCCEEEEEECTTSCEEEEETTSCEEECTTSCHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCHHHHHHHHHHC-CCCCEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCCEECCCHHHHHHHHHHHHH
T ss_conf             618998089888988999999842-6997389997166444205889840797299977995421324778999999998


Q ss_pred             H-----CCCCEEEECCCCCCCHHHHHHHHCC-CCCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCEEEEECCC
Q ss_conf             2-----5988999818675544899997425-100464688308999841155465752138999998506688980610
Q batch____        82 Q-----GKPDRLLIEPTGLGHPKQILDLLTA-PVYEPWIDLRATLCILDPRLLLDEKSASNENFRDQLAAADIIVANKSD  155 (328)
Q Consensus        82 ~-----~~~d~iiiE~sG~a~p~~i~~~l~~-~~~~~~~~l~~vi~vVDa~~~~~~~~~~~~~~~~Qi~~Ad~ivlnK~D  155 (328)
                      +     .+||+|+||+||+++|.+++++++. +.+..++.+++++|||||.++.++.... +++.+||++||+|++||+|
T Consensus        82 ~~~~~~~~~d~i~IE~sG~a~p~~i~~~l~~~~~l~~~~~l~~vi~vvD~~~~~~~~~~~-~~~~~Qi~~Ad~ivlnk~D  160 (317)
T c1nijA_          82 NLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQRYLLDGVIALVDAVHADEQMNQF-TIAQSQVGYADRILLTKTD  160 (317)
T ss_dssp             HHHHTSCCCSEEEEEEETTCCHHHHHHHHHHSHHHHHHEEEEEEEEEEETTTHHHHHHHC-HHHHHHHHTCSEEEEECTT
T ss_pred             HHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEECHHHHHHHHHH-HHHHHHHHHCCEEEEECCC
T ss_conf             412554686689980887579899998863082011308980178997402677766322-5564453107789960556


Q ss_pred             CCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             28999999999999985899759997324569878444434610123444321112333477754453234664377766
Q batch____       156 RTTPESEQALQRWWQQNGGDRQLIHSEHGKVDGHLLDLPRRNLAELPASAAHSHQHVVKKGLAALSLPEHQRWRRSLNSG  235 (328)
Q Consensus       156 ~~~~~~l~~~~~~i~~lnp~a~i~~t~~~~v~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (328)
                      ++++.+  ++++.++.+||.|+++.+++++++.+++                    .................+.+.+.+
T Consensus       161 ~~~~~~--~i~~~i~~lnP~a~i~~~~~g~vd~~~l--------------------~~~~~~~~~~~~~~~~~~~~~~~~  218 (317)
T c1nijA_         161 VAGEAE--KLHERLARINARAPVYTVTHGDIDLGLL--------------------FNTNGFMLEENVVSTKPRFHFIAD  218 (317)
T ss_dssp             TCSCTH--HHHHHHHHHCSSSCEEECCSSCCCGGGG--------------------SCCCTTSCCSCCCSSCCCSCSTGG
T ss_pred             CCCHHH--HHHHHHHHHCCCCEEEEEECCCCCHHHH--------------------CCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             689899--9999997408997799963054687897--------------------198866852100012422368744


Q ss_pred             CCEEEEEEEECHHHCCCHHHHHHHHC------CCCEEEEEEEEECCCE--EEEEEEECCEEEE---EECCCCCCCEEEEE
Q ss_conf             64479999964132359888988526------8986998789971993--3999945897999---75688888308999
Q batch____       236 QGYQACGWIFDADTVFDTIGILEWAR------LAPVERVKGVLRIPEG--LVRINRQGDDLHI---ETQNVAPPDSRIEL  304 (328)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~i~R~KG~i~~~~~--~~~~~~vg~~~~i---~~~~~~~~~s~lV~  304 (328)
                      ....+.++.|..++|+++.++..|+.      +..|||+||++|++++  ++.||+||+.+++   .+|++..++++|||
T Consensus       219 ~~~~i~s~~~~~~~p~~~~~l~~~l~~l~~~~~~~i~R~KG~v~l~~~~~~~~~q~vg~~~~~~~~~~~~~~~~~~~LVf  298 (317)
T c1nijA_         219 KQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLFQGVQRLYSADWDRPWGDEKPHSTMVF  298 (317)
T ss_dssp             GGCSEEEEEEEESSCBCHHHHHHHHHHHHHHTTTTEEEEEEEECBTTCSEEEEEEEETTEEEEEEEEECTTSCCCEEEEE
T ss_pred             CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEEECCEEEECCCCCCCCCCCCEEEEE
T ss_conf             34527999998088889999999999998525997899888999888995599982288898241345887788408999


Q ss_pred             ECCCCCCHHHHHHHHHHCC
Q ss_conf             8198599999998897504
Q batch____       305 ISSSEADWNALQSALLKLR  323 (328)
Q Consensus       305 IG~~~ld~~~l~~~L~~~~  323 (328)
                      ||.+ +|++.|++.|++|+
T Consensus       299 IG~~-ld~~~l~~~l~~c~  316 (317)
T c1nijA_         299 IGIQ-LPEEEIRAAFAGLR  316 (317)
T ss_dssp             EEES-CCHHHHHHHHHTTC
T ss_pred             ECCC-CCHHHHHHHHHHHC
T ss_conf             7379-99999999998606