32 c1rnlA_ Probab=99.88   E-value=9.1e-22  Score=143.07  Aligned_columns=179  Identities=28%

Q ss_pred             EEEEECCCHHHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHC-CCCEEEEECCCCCCCCCCCCCC-CCCCCCCCEEEEC
Q ss_conf             69997499899999999999889--889999998999999745-9989999467887332211112-2356665203312
Q batch____         3 KILLVDDDRELTSLLKELLEMEG--FNVIVAHDGEQALDLLDD-SIDLLLLDVMMPKKNGIDTLKA-LRQTHQTPVIMLT   78 (232)
Q Consensus         3 rILiVdDd~~~~~~l~~~L~~~g--~~V~~a~~~~eal~~l~~-~pdlvi~d~~~p~~~g~~~~~~-~~~~~~~~ii~ls   78 (232)
                      ||||||||+.++.+++.+|+..+  ..|..|.|+.+|++.+.+ +||++++|+.+|+++|...+.. ....+..++++++
T Consensus         4 ~Ilivdd~~~~~~~l~~~L~~~~~~~~v~~a~~~~eal~~~~~~~pdiilld~~l~~~~g~~~~~~~~~~~~~~~~~~~~   83 (200)
T c1rnlA_           4 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFS   83 (200)
T ss_dssp             EEEEECSCHHHHHHHHHHHHTCTTEEEEEEESSHHHHHHHHHHHCCSEEEEETTCGGGCHHHHHHHHTTSCCCSEEEEEC
T ss_pred             EEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf             89997499899999999998489817999978989999999871997554211111000136899974203100123444


Q ss_pred             CCCCHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             46631222221012222110003432221367999864210100000001211122222222333211111122100011
Q batch____        79 ARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRSHWSEQQQNNDNGSPTLEVDALVLNPGRQEASFDGQTLELT  158 (232)
Q Consensus        79 ~~~~~~~~~~~~~~ga~~~i~Kp~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~  158 (232)
                      +.............+..++..++.....+.......                      ....................++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~lt  141 (200)
T c1rnlA_          84 VSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA----------------------AAGEMVLSEALTPVLAASLQLT  141 (200)
T ss_dssp             SCSCHHHHHHHHHTTCSEEECTTSCHHHHHHHHHHH----------------------HHSCCCCCTTTHHHHHHHCCCC
T ss_pred             CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC----------------------CCCCCCCCCCCCCCCCCCCCCC
T ss_conf             531011100001122222210012222222222222----------------------2222222222221111111122


Q ss_pred             CCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf             101333334332000134799999985045678874289999999999600157
Q batch____       159 GTEFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMHISNLRRKLPDRK  212 (232)
Q Consensus       159 ~~e~~~l~~l~~~~~~~~s~~~l~~~v~~~~~~~~~~tv~~~I~~lr~KL~~~~  212 (232)
                      ++|..++..+.....         ++.++.++.+|++||++|+++|++||+..+
T Consensus       142 ~re~~vl~~~~~g~s---------~keIA~~L~iS~~TV~~h~~~i~~KL~v~n  186 (200)
T c1rnlA_         142 PRERDILKLIAQGLP---------NKMIARRLDITESTVKVHVKHMLKKMKLKS  186 (200)
T ss_dssp             HHHHHHHHHHHTTCC---------HHHHHHHHTCCHHHHHHHHHHHHHHTTCCS
T ss_pred             CCCCCCCCCCCCCCC---------HHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
T ss_conf             211111222456776---------899898868870699999999999817998