Phyre 2 alignment of P13036 with d1pzna1

Return to main results | Retrieve Phyre Job Id

Job Description | P13036
Confidence | 4.88% | Date | Thu Jan 5 11:33:31 GMT 2012
Rank | 82 | Aligned Residues | 33
% Identity | 15% | Template | d1pzna1
SCOP info | SAM domain-like | Rad51 N-terminal domain-like | DNA repair protein Rad51, N-terminal domain
Resolution | 2.85

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | N | D | V | F | E | H | A | G | A | R | D | V | I | R | R | E | D | F | A | K | T | G | A | T | T | M | R | E | V | L | N | R | I | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | S | I | E | D | L | P | G | . | V | G | P | A | T | A | E | K | L | R | E | A | G | Y | D | T | L | E | A | I | A | V | A | S | P
Template Known Secondary structure |  |  |  | S | S |  |  | T | T | . |  |  |  |  |  |  |  |  |  |  | T | T | T |  |  | S |  |  |  |  |  | T |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 35 | . | . | . | . | 40 | . | . |  | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions