Phyre 2 alignment of P13036 with c1qmfA_

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Job Description | P13036
Confidence | 3.97% | Date | Thu Jan 5 11:33:31 GMT 2012
Rank | 100 | Aligned Residues | 43
% Identity | 12% | Template | c1qmfA_
PDB info | PDB header:peptidoglycan synthesis | Chain: A: PDB Molecule:penicillin-binding protein 2x; | PDBTitle: penicillin-binding protein 2x (pbp-2x) acyl-enzyme complex
Resolution | 2.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | G | K | Q | S | N | G | L | H | G | D | Y | D | V | E | S | G | L | Q | Q | L | L | D | G | S | G | L | Q | V | K | P | L | G | N | N | S | W | T | L | E | P | A | P | A | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | A | E | E | V | P | D | M | Y | G | . | W | T | K | E | T | A | E | . | T | L | A | K | W | L | N | I | E | L | E | F | Q | G | S | G | S | T | V | Q | K | Q | D | V | R | A
Template Known Secondary structure |  |  |  |  | B |  |  |  |  | T | T | . |  | B |  |  |  |  |  | . |  |  |  |  |  | T | T |  |  |  |  |  |  | S | S | S | S |  |  |  |  |  | S | S |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 692 | . | . | . | . | . | . | . | 700 | . |  | . | . | . | . | . | . | . |  | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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