Phyre 2 alignment of P13036 with d1pyya1

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Job Description | P13036
Confidence | 4.02% | Date | Thu Jan 5 11:33:31 GMT 2012
Rank | 99 | Aligned Residues | 35
% Identity | 9% | Template | d1pyya1
SCOP info | Penicillin-binding protein 2x (pbp-2x), c-terminal domain | Penicillin-binding protein 2x (pbp-2x), c-terminal domain | Penicillin-binding protein 2x (pbp-2x), c-terminal domain
Resolution | 2.42

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Y | D | V | E | S | G | L | Q | Q | L | L | D | G | S | G | L | Q | V | K | P | L | G | N | N | S | W | T | L | E | P | A | P | A | P | K | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | S | P | G | D | L | A | E | E | . | L | R | R | N | L | V | Q | P | I | V | V | G | T | G | T | K | I | K | N | S | S | A | E | E | G | K
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | . |  |  |  | T | T |  |  |  |  |  |  | S | S |  | S | S |  |  |  |  | S | S |  | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 644 | . | . | . | . | . | 650 | . | . |  | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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