10/01/2012 21:40:19 : INFO  : Run start: Tue Jan 10 21:40:19 GMT 2012
10/01/2012 21:40:22 : INFO  : Initialised job
10/01/2012 21:40:23 : INFO  : Renaming log file 'phyre2_20120110_214018.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/0fe111a23c9297f4/phyre_20120110_214018.log'
10/01/2012 21:40:24 : INFO  : Initialised job:
Sequence
>batch____
MTPLRVFRKTTPLVNTIRLSLLPLAGLSFSAFAAQVNIAPGSLDKALNQYAAHSGFTLSV
DASLTRGKQSNGLHGDYDVESGLQQLLDGSGLQVKPLGNNSWTLEPAPAPKEDALTVVGD
WLGDARENDVFEHAGARDVIRREDFAKTGATTMREVLNRIPGVSAPENNGTGSHDLAMNF
GIRGLNPRLASRSTVLMDGIPVPFAPYGQPQLSLAPVSLGNMDAIDVVRGGGAVRYGPQS
VGGVVNFVTRAIPQDFGIEAGVEGQLSPTSSQNNPKETHNLMVGGTADNGFGTALLYSGT
RGSDWREHSATRIDDLMLKSKYAPDEVHTFNSLLQYYDGEADMPGGLSRADYDADRWQST
RPYDRFWGRRKLASLGYQFQPDSQHKFNIQGFYTQTLRSGYLEQGKRITLSPRNYWVRGI
EPRYSQIFMIGPSAHEVGVGYRYLNESTHEMRYYTATSSGQLPSGSSPYDRDTRSGTEAH
AWYLDDKIDIGNWTITPGMRFEHIESYQNNAITGTHEEVSYNAPLPALNVLYHLTDSWNL
YANTEGSFGTVQYSQIGKAVQSGNVEPEKARTWELGTRYDDGALTAEMGLFLINFNNQYD
SNQTNDTVTARGKTRHTGLETQARYDLGTLTPTLDNVSIYASYAYVNAEIREKGDTYGNL
VPFSPKHKGTLGVDYKPGNWTFNLNSDFQSSQFADNANTVKESADGSTGRIPGFMLWGAR
VAYDFGPQMADLNLAFGVKNIFDQDYFIRSYDDNNKGIYAGQPRTLYMQGSLKF

10/01/2012 21:40:25 : INFO  : Checked sequence
10/01/2012 21:40:28 : INFO  : Finding homologues with PSI-BLAST
10/01/2012 21:40:29 : INFO  : PSI-BLAST 3 iterations
10/01/2012 21:44:16 : INFO  : PSI-BLAST 5 iterations
10/01/2012 21:50:23 : INFO  : Finished PSI-BLAST
10/01/2012 21:50:24 : INFO  : Running Buildali to generate a3m file
11/01/2012 01:59:33 : INFO  : Converting to HMM
11/01/2012 02:02:26 : INFO  : Calibrating HMM
11/01/2012 02:02:57 : INFO  : Searching HMM database
11/01/2012 02:20:20 : INFO  : Finished buildali
11/01/2012 02:20:21 : INFO  : Predicting secondary structure
11/01/2012 02:20:25 : INFO  : Predicted secondary structure (PSI-Pred)
11/01/2012 02:20:25 : INFO  : Predicting Disordered regions
11/01/2012 02:20:27 : INFO  : Predicted Disorder (Disopred)
11/01/2012 02:20:28 : INFO  : Running memsat_svm check
11/01/2012 02:24:10 : INFO  : Globular protein
11/01/2012 02:24:11 : INFO  : Predicted Transmembrane (memsat_svm) ID '0fe111a23c9297f4'
11/01/2012 02:24:11 : INFO  : Initialising fold library search
11/01/2012 02:24:13 : INFO  : Initialised search input
11/01/2012 02:24:14 : INFO  : Building Ensemble models
11/01/2012 02:24:15 : INFO  : Building hh.c2iahA_.model.1.pdb
11/01/2012 02:24:22 : INFO  : Building hh.d1kmoa_.model.2.pdb
11/01/2012 02:24:27 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/0fe111a23c9297f4/hh.d1kmoa_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/0fe111a23c9297f4/d1kmoa_.2.pdb
11/01/2012 02:24:30 : INFO  : Building hh.c1po3A_.model.3.pdb
11/01/2012 02:24:36 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/0fe111a23c9297f4/hh.c1po3A_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/0fe111a23c9297f4/c1po3A_.3.pdb
11/01/2012 02:24:38 : INFO  : Building c2iahA_.1.pdb
11/01/2012 02:24:44 : INFO  : Building d1kmoa_.2.pdb
11/01/2012 02:24:51 : INFO  : Building c1po3A_.3.pdb
11/01/2012 02:24:58 : INFO  : Building d1by5a_.4.pdb
11/01/2012 02:25:05 : INFO  : Building c2grxB_.5.pdb
11/01/2012 02:25:11 : INFO  : Building c3qlbA_.6.pdb
11/01/2012 02:25:19 : INFO  : Building c1xkhC_.7.pdb
11/01/2012 02:25:25 : INFO  : Building c1xkwA_.8.pdb
11/01/2012 02:25:31 : INFO  : Building c3fhhA_.9.pdb
11/01/2012 02:25:38 : INFO  : Building d2gufa1.10.pdb
11/01/2012 02:25:44 : INFO  : Building d1fepa_.11.pdb
11/01/2012 02:25:50 : INFO  : Building c3efmA_.12.pdb
11/01/2012 02:25:57 : INFO  : Building c3cslB_.13.pdb
11/01/2012 02:26:04 : INFO  : Building c2hdiA_.14.pdb
11/01/2012 02:26:11 : INFO  : Building c2d1uA_.15.pdb
11/01/2012 02:26:17 : INFO  : Building c1zzvA_.16.pdb
11/01/2012 02:26:23 : INFO  : Building c2a02A_.17.pdb
11/01/2012 02:26:31 : INFO  : Building d1t16a_.18.pdb
11/01/2012 02:26:37 : INFO  : Building c3dwoX_.19.pdb
11/01/2012 02:26:43 : INFO  : Building c3brzA_.20.pdb
11/01/2012 02:27:23 : INFO  : Finished HH model building
11/01/2012 02:27:24 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
11/01/2012 02:28:08 : INFO  : html domain output complete ID '0fe111a23c9297f4'
11/01/2012 08:18:56 : INFO  : Run end  : Wed Jan 11 08:18:56 GMT 2012
