Phyre 2 Results for P13036

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Email | l.a.kelley@imperial.ac.uk
Description | P13036
Date | Thu Jan 5 11:33:31 GMT 2012
Unique Job ID | 0fe111a23c9297f4

Summary |

Top model
Image coloured by rainbow N → C terminus
| Close Jmol

Model (left) based on template c2iahA_
Top template information
PDB header:membrane protein Chain: A: PDB Molecule:ferripyoverdine receptor; PDBTitle: crystal structure of the ferripyoverdine receptor of the outer2 membrane of pseudomonas aeruginosa bound to ferripyoverdine.
Confidence and coverage
Confidence: | 100.0% | Coverage: | 92%
714 residues ( 92% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | T | P | L | R | V | F | R | K | T | T | P | L | V | N | T | I | R | L | S | L | L | P | L | A | G | L | S | F | S | A | F | A | A | Q | V | N | I | A | P | G | S | L | D | K | A | L | N | Q | Y | A | A | H | S | G | F | T | L | S | V
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | D | A | S | L | T | R | G | K | Q | S | N | G | L | H | G | D | Y | D | V | E | S | G | L | Q | Q | L | L | D | G | S | G | L | Q | V | K | P | L | G | N | N | S | W | T | L | E | P | A | P | A | P | K | E | D | A | L | T | V | V | G | D
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  | ? | ? | ? | ? | ? |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Sequence |  | W | L | G | D | A | R | E | N | D | V | F | E | H | A | G | A | R | D | V | I | R | R | E | D | F | A | K | T | G | A | T | T | M | R | E | V | L | N | R | I | P | G | V | S | A | P | E | N | N | G | T | G | S | H | D | L | A | M | N | F
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240
Sequence |  | G | I | R | G | L | N | P | R | L | A | S | R | S | T | V | L | M | D | G | I | P | V | P | F | A | P | Y | G | Q | P | Q | L | S | L | A | P | V | S | L | G | N | M | D | A | I | D | V | V | R | G | G | G | A | V | R | Y | G | P | Q | S
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300
Sequence |  | V | G | G | V | V | N | F | V | T | R | A | I | P | Q | D | F | G | I | E | A | G | V | E | G | Q | L | S | P | T | S | S | Q | N | N | P | K | E | T | H | N | L | M | V | G | G | T | A | D | N | G | F | G | T | A | L | L | Y | S | G | T
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360
Sequence |  | R | G | S | D | W | R | E | H | S | A | T | R | I | D | D | L | M | L | K | S | K | Y | A | P | D | E | V | H | T | F | N | S | L | L | Q | Y | Y | D | G | E | A | D | M | P | G | G | L | S | R | A | D | Y | D | A | D | R | W | Q | S | T
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? | ? | ? |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  | ? | ? | ? | ? |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420
Sequence |  | R | P | Y | D | R | F | W | G | R | R | K | L | A | S | L | G | Y | Q | F | Q | P | D | S | Q | H | K | F | N | I | Q | G | F | Y | T | Q | T | L | R | S | G | Y | L | E | Q | G | K | R | I | T | L | S | P | R | N | Y | W | V | R | G | I
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? |  |  | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480
Sequence |  | E | P | R | Y | S | Q | I | F | M | I | G | P | S | A | H | E | V | G | V | G | Y | R | Y | L | N | E | S | T | H | E | M | R | Y | Y | T | A | T | S | S | G | Q | L | P | S | G | S | S | P | Y | D | R | D | T | R | S | G | T | E | A | H
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? |  | ? |  |  |  |  |  |  | ? | ? |  | ? | ? |  |  | ? | ? | ? | ? | ? | ? |  | ? |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540
Sequence |  | A | W | Y | L | D | D | K | I | D | I | G | N | W | T | I | T | P | G | M | R | F | E | H | I | E | S | Y | Q | N | N | A | I | T | G | T | H | E | E | V | S | Y | N | A | P | L | P | A | L | N | V | L | Y | H | L | T | D | S | W | N | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600
Sequence |  | Y | A | N | T | E | G | S | F | G | T | V | Q | Y | S | Q | I | G | K | A | V | Q | S | G | N | V | E | P | E | K | A | R | T | W | E | L | G | T | R | Y | D | D | G | A | L | T | A | E | M | G | L | F | L | I | N | F | N | N | Q | Y | D
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660
Sequence |  | S | N | Q | T | N | D | T | V | T | A | R | G | K | T | R | H | T | G | L | E | T | Q | A | R | Y | D | L | G | T | L | T | P | T | L | D | N | V | S | I | Y | A | S | Y | A | Y | V | N | A | E | I | R | E | K | G | D | T | Y | G | N | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720
Sequence |  | V | P | F | S | P | K | H | K | G | T | L | G | V | D | Y | K | P | G | N | W | T | F | N | L | N | S | D | F | Q | S | S | Q | F | A | D | N | A | N | T | V | K | E | S | A | D | G | S | T | G | R | I | P | G | F | M | L | W | G | A | R
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | .
Sequence |  | V | A | Y | D | F | G | P | Q | M | A | D | L | N | L | A | F | G | V | K | N | I | F | D | Q | D | Y | F | I | R | S | Y | D | D | N | N | K | G | I | Y | A | G | Q | P | R | T | L | Y | M | Q | G | S | L | K | F
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| c2iahA_ |

### PDB 2iah chain A

Region: 32 - 774
Aligned: 714
Modelled: 738
Confidence: 100.0%
Identity: 15%
PDB header:membrane protein
Chain: A: PDB Molecule:ferripyoverdine receptor;
PDBTitle: crystal structure of the ferripyoverdine receptor of the outer2 membrane of pseudomonas aeruginosa bound to ferripyoverdine.

Phyre2
2 |
| d1kmoa_ |

### PDB 1kmo chain A

Region: 118 - 774
Aligned: 657
Modelled: 657
Confidence: 100.0%
Identity: 99%
Fold: Transmembrane beta-barrels
Superfamily: Porins
Family: Ligand-gated protein channel

Phyre2
3 |
| c1po3A_ |

### PDB 1po3 chain A

Region: 128 - 774
Aligned: 647
Modelled: 647
Confidence: 100.0%
Identity: 100%
PDB header:membrane protein
Chain: A: PDB Molecule:iron(iii) dicitrate transport protein feca
PDBTitle: crystal structure of ferric citrate transporter feca in2 complex with ferric citrate

Phyre2
4 |
| d1by5a_ |

### PDB 1by5 chain A

Region: 105 - 774
Aligned: 636
Modelled: 665
Confidence: 100.0%
Identity: 16%
Fold: Transmembrane beta-barrels
Superfamily: Porins
Family: Ligand-gated protein channel

Phyre2
5 |
| c2grxB_ |

### PDB 2grx chain B

Region: 107 - 774
Aligned: 636
Modelled: 636
Confidence: 100.0%
Identity: 16%
PDB header:metal transport
Chain: B: PDB Molecule:ferrichrome-iron receptor;
PDBTitle: crystal structure of tonb in complex with fhua, e. coli2 outer membrane receptor for ferrichrome

Phyre2
6 |
| c3qlbA_ |

### PDB 3qlb chain A

Region: 107 - 774
Aligned: 631
Modelled: 655
Confidence: 100.0%
Identity: 16%
PDB header:metal transport
Chain: A: PDB Molecule:enantio-pyochelin receptor;
PDBTitle: enantiopyochelin outer membrane tonb-dependent transporter from2 pseudomonas fluorescens bound to the ferri-enantiopyochelin

Phyre2
7 |
| c1xkhC_ |

### PDB 1xkh chain C

Region: 107 - 774
Aligned: 639
Modelled: 662
Confidence: 100.0%
Identity: 13%
PDB header:membrane protein
Chain: C: PDB Molecule:ferripyoverdine receptor;
PDBTitle: pyoverdine outer membrane receptor fpva from pseudomonas aeruginosa2 pao1 bound to pyoverdine

Phyre2
8 |
| c1xkwA_ |

### PDB 1xkw chain A

Region: 111 - 774
Aligned: 632
Modelled: 649
Confidence: 100.0%
Identity: 14%
PDB header:membrane protein
Chain: A: PDB Molecule:fe(iii)-pyochelin receptor;
PDBTitle: pyochelin outer membrane receptor fpta from pseudomonas2 aeruginosa

Phyre2
9 |
| c3fhhA_ |

### PDB 3fhh chain A

Region: 116 - 774
Aligned: 593
Modelled: 626
Confidence: 100.0%
Identity: 16%
PDB header:membrane protein
Chain: A: PDB Molecule:outer membrane heme receptor shua;
PDBTitle: crystal structure of the heme/hemoglobin outer membrane2 transporter shua from shigella dysenteriae

Phyre2
10 |
| d2gufa1 |

### PDB 2guf chain A domain 1

Region: 118 - 774
Aligned: 545
Modelled: 573
Confidence: 100.0%
Identity: 18%
Fold: Transmembrane beta-barrels
Superfamily: Porins
Family: Ligand-gated protein channel

Phyre2
11 |
| d1fepa_ |

### PDB 1fep chain A

Region: 117 - 774
Aligned: 639
Modelled: 651
Confidence: 100.0%
Identity: 14%
Fold: Transmembrane beta-barrels
Superfamily: Porins
Family: Ligand-gated protein channel

Phyre2
12 |
| c3efmA_ |

### PDB 3efm chain A

Region: 109 - 751
Aligned: 558
Modelled: 581
Confidence: 100.0%
Identity: 17%
PDB header:membrane protein
Chain: A: PDB Molecule:ferric alcaligin siderophore receptor;
PDBTitle: structure of the alcaligin outer membrane recepteur faua from2 bordetella pertussis

Phyre2
13 |
| c3cslB_ |

### PDB 3csl chain B

Region: 127 - 774
Aligned: 632
Modelled: 648
Confidence: 100.0%
Identity: 13%
PDB header:membrane protein/heme binding protein
Chain: B: PDB Molecule:hasr protein;
PDBTitle: structure of the serratia marcescens hemophore receptor hasr in2 complex with its hemophore hasa and heme

Phyre2
14 |
| c2hdiA_ |

### PDB 2hdi chain A

Region: 117 - 774
Aligned: 569
Modelled: 593
Confidence: 100.0%
Identity: 16%
PDB header:protein transport,antimicrobial protein
Chain: A: PDB Molecule:colicin i receptor;
PDBTitle: crystal structure of the colicin i receptor cir from e.coli in complex2 with receptor binding domain of colicin ia.

Phyre2
15 |
| c2d1uA_ |

### PDB 2d1u chain A

Region: 35 - 131
Aligned: 97
Modelled: 97
Confidence: 99.8%
Identity: 98%
PDB header:metal transport
Chain: A: PDB Molecule:iron(iii) dicitrate transport protein feca;
PDBTitle: solution strcuture of the periplasmic signaling domain of2 feca from escherichia coli

Phyre2
16 |
| c1zzvA_ |

### PDB 1zzv chain A

Region: 35 - 113
Aligned: 79
Modelled: 79
Confidence: 99.8%
Identity: 100%
PDB header:membrane protein, metal transport
Chain: A: PDB Molecule:iron(iii) dicitrate transport protein feca;
PDBTitle: solution nmr structure of the periplasmic signaling domain2 of the outer membrane iron transporter feca from3 escherichia coli.

Phyre2
17 |
| c2a02A_ |

### PDB 2a02 chain A

Region: 31 - 111
Aligned: 81
Modelled: 81
Confidence: 99.4%
Identity: 27%
PDB header:membrane protein, metal transport
Chain: A: PDB Molecule:ferric-pseudobactin 358 receptor;
PDBTitle: solution nmr structure of the periplasmic signaling domain2 of the outer membrane iron transporter pupa from3 pseudomonas putida.

Phyre2
18 |
| d1t16a_ |

### PDB 1t16 chain A

Region: 524 - 774
Aligned: 239
Modelled: 251
Confidence: 99.2%
Identity: 17%
Fold: Transmembrane beta-barrels
Superfamily: Porins
Family: Outer membrane protein transport protein

Phyre2
19 |
| c3dwoX_ |

### PDB 3dwo chain X

Region: 518 - 726
Aligned: 205
Modelled: 209
Confidence: 98.9%
Identity: 16%
PDB header:membrane protein
Chain: X: PDB Molecule:probable outer membrane protein;
PDBTitle: crystal structure of a pseudomonas aeruginosa fadl homologue

Phyre2
20 |
| c3brzA_ |

### PDB 3brz chain A

Region: 516 - 725
Aligned: 190
Modelled: 198
Confidence: 97.6%
Identity: 15%
PDB header:transport protein
Chain: A: PDB Molecule:todx;
PDBTitle: crystal structure of the pseudomonas putida toluene2 transporter todx

Phyre2
21 |
22 |
23 |
24 |
25 |
26 |
27 |
28 |
29 |
30 |
31 |
32 |
33 |
34 |
35 |
36 |
37 |
38 |
39 |
40 |
41 |
42 |
43 |
44 |
45 |
46 |
47 |
48 |
49 |
50 |
51 |
52 |
53 |
54 |
55 |
56 |
57 |
58 |
59 |
60 |
61 |
62 |
63 |
64 |
65 |
66 |
67 |
68 |
69 |
70 |
71 |
72 |
73 |
74 |
75 |
76 |
77 |
78 |

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c2iahA_ |
|  | 100.0 | 15 | PDB header:membrane protein Chain: A: PDB Molecule:ferripyoverdine receptor; PDBTitle: crystal structure of the ferripyoverdine receptor of the outer2 membrane of pseudomonas aeruginosa bound to ferripyoverdine.
2 | d1kmoa_ |
|  | 100.0 | 99 | Fold:Transmembrane beta-barrels Superfamily:Porins Family:Ligand-gated protein channel
3 | c1po3A_ |
|  | 100.0 | 100 | PDB header:membrane protein Chain: A: PDB Molecule:iron(iii) dicitrate transport protein feca PDBTitle: crystal structure of ferric citrate transporter feca in2 complex with ferric citrate
4 | d1by5a_ |
|  | 100.0 | 16 | Fold:Transmembrane beta-barrels Superfamily:Porins Family:Ligand-gated protein channel
5 | c2grxB_ |
|  | 100.0 | 16 | PDB header:metal transport Chain: B: PDB Molecule:ferrichrome-iron receptor; PDBTitle: crystal structure of tonb in complex with fhua, e. coli2 outer membrane receptor for ferrichrome
6 | c3qlbA_ |
|  | 100.0 | 16 | PDB header:metal transport Chain: A: PDB Molecule:enantio-pyochelin receptor; PDBTitle: enantiopyochelin outer membrane tonb-dependent transporter from2 pseudomonas fluorescens bound to the ferri-enantiopyochelin
7 | c1xkhC_ |
|  | 100.0 | 13 | PDB header:membrane protein Chain: C: PDB Molecule:ferripyoverdine receptor; PDBTitle: pyoverdine outer membrane receptor fpva from pseudomonas aeruginosa2 pao1 bound to pyoverdine
8 | c1xkwA_ |
|  | 100.0 | 14 | PDB header:membrane protein Chain: A: PDB Molecule:fe(iii)-pyochelin receptor; PDBTitle: pyochelin outer membrane receptor fpta from pseudomonas2 aeruginosa
9 | c3fhhA_ |
|  | 100.0 | 16 | PDB header:membrane protein Chain: A: PDB Molecule:outer membrane heme receptor shua; PDBTitle: crystal structure of the heme/hemoglobin outer membrane2 transporter shua from shigella dysenteriae
10 | d2gufa1 |
|  | 100.0 | 18 | Fold:Transmembrane beta-barrels Superfamily:Porins Family:Ligand-gated protein channel
11 | d1fepa_ |
|  | 100.0 | 14 | Fold:Transmembrane beta-barrels Superfamily:Porins Family:Ligand-gated protein channel
12 | c3efmA_ |
|  | 100.0 | 17 | PDB header:membrane protein Chain: A: PDB Molecule:ferric alcaligin siderophore receptor; PDBTitle: structure of the alcaligin outer membrane recepteur faua from2 bordetella pertussis
13 | c3cslB_ |
|  | 100.0 | 13 | PDB header:membrane protein/heme binding protein Chain: B: PDB Molecule:hasr protein; PDBTitle: structure of the serratia marcescens hemophore receptor hasr in2 complex with its hemophore hasa and heme
14 | c2hdiA_ |
|  | 100.0 | 16 | PDB header:protein transport,antimicrobial protein Chain: A: PDB Molecule:colicin i receptor; PDBTitle: crystal structure of the colicin i receptor cir from e.coli in complex2 with receptor binding domain of colicin ia.
15 | c2d1uA_ |
|  | 99.8 | 98 | PDB header:metal transport Chain: A: PDB Molecule:iron(iii) dicitrate transport protein feca; PDBTitle: solution strcuture of the periplasmic signaling domain of2 feca from escherichia coli
16 | c1zzvA_ |
|  | 99.8 | 100 | PDB header:membrane protein, metal transport Chain: A: PDB Molecule:iron(iii) dicitrate transport protein feca; PDBTitle: solution nmr structure of the periplasmic signaling domain2 of the outer membrane iron transporter feca from3 escherichia coli.
17 | c2a02A_ |
|  | 99.4 | 27 | PDB header:membrane protein, metal transport Chain: A: PDB Molecule:ferric-pseudobactin 358 receptor; PDBTitle: solution nmr structure of the periplasmic signaling domain2 of the outer membrane iron transporter pupa from3 pseudomonas putida.
18 | d1t16a_ |
|  | 99.2 | 17 | Fold:Transmembrane beta-barrels Superfamily:Porins Family:Outer membrane protein transport protein
19 | c3dwoX_ |
|  | 98.9 | 16 | PDB header:membrane protein Chain: X: PDB Molecule:probable outer membrane protein; PDBTitle: crystal structure of a pseudomonas aeruginosa fadl homologue
20 | c3brzA_ |
|  | 97.6 | 15 | PDB header:transport protein Chain: A: PDB Molecule:todx; PDBTitle: crystal structure of the pseudomonas putida toluene2 transporter todx
21 | c2y9kG_ |
| not modelled | 96.7 | 18 | PDB header:protein transport Chain: G: PDB Molecule:protein invg; PDBTitle: three-dimensional model of salmonella's needle complex at2 subnanometer resolution
22 | c3gr5A_ |
| not modelled | 95.8 | 14 | PDB header:membrane protein Chain: A: PDB Molecule:escc; PDBTitle: periplasmic domain of the outer membrane secretin escc from2 enteropathogenic e.coli (epec)
23 | c3ezjA_ |
| not modelled | 91.8 | 18 | PDB header:protein transport Chain: A: PDB Molecule:general secretion pathway protein gspd; PDBTitle: crystal structure of the n-terminal domain of the secretin gspd from2 etec determined with the assistance of a nanobody
24 | c3ossD_ |
| not modelled | 89.1 | 18 | PDB header:protein transport Chain: D: PDB Molecule:type 2 secretion system, secretin gspd; PDBTitle: the crystal structure of enterotoxigenic escherichia coli gspc-gspd2 complex from the type ii secretion system
25 | c3bryB_ |
| not modelled | 87.4 | 16 | PDB header:transport protein Chain: B: PDB Molecule:tbux; PDBTitle: crystal structure of the ralstonia pickettii toluene2 transporter tbux
26 | c2k0lA_ |
| not modelled | 81.8 | 8 | PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr structure of the transmembrane domain of the outer2 membrane protein a from klebsiella pneumoniae in dhpc3 micelles.
27 | d1g90a_ |
| not modelled | 79.7 | 20 | Fold:Transmembrane beta-barrels Superfamily:OMPA-like Family:Outer membrane protein
28 | c2y3mA_ |
| not modelled | 79.4 | 11 | PDB header:transport protein Chain: A: PDB Molecule:protein transport protein hofq; PDBTitle: structure of the extra-membranous domain of the secretin2 hofq from actinobacillus actinomycetemcomitans
29 | d1qjpa_ |
| not modelled | 70.0 | 18 | Fold:Transmembrane beta-barrels Superfamily:OMPA-like Family:Outer membrane protein
30 | c3qraA_ |
| not modelled | 65.4 | 12 | PDB header:cell invasion Chain: A: PDB Molecule:attachment invasion locus protein; PDBTitle: the crystal structure of ail, the attachment invasion locus protein of2 yersinia pestis
31 | c2x27X_ |
| not modelled | 63.4 | 12 | PDB header:membrane protein Chain: X: PDB Molecule:outer membrane protein oprg; PDBTitle: crystal structure of the outer membrane protein oprg from2 pseudomonas aeruginosa
32 | d1p4ta_ |
| not modelled | 61.0 | 13 | Fold:Transmembrane beta-barrels Superfamily:OMPA-like Family:Outer membrane protein
33 | c2iwvD_ |
| not modelled | 58.0 | 13 | PDB header:ion channel Chain: D: PDB Molecule:outer membrane protein g; PDBTitle: structure of the monomeric outer membrane porin ompg in the2 open and closed conformation
34 | d1qj8a_ |
| not modelled | 55.0 | 17 | Fold:Transmembrane beta-barrels Superfamily:OMPA-like Family:Outer membrane protein
35 | c2f1tB_ |
| not modelled | 52.4 | 12 | PDB header:membrane protein Chain: B: PDB Molecule:outer membrane protein w; PDBTitle: outer membrane protein ompw
36 | c2lhfA_ |
| not modelled | 51.5 | 9 | PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein h1; PDBTitle: solution structure of outer membrane protein h (oprh) from p.2 aeruginosa in dhpc micelles
37 | c3nb3C_ |
| not modelled | 42.6 | 18 | PDB header:virus Chain: C: PDB Molecule:outer membrane protein a; PDBTitle: the host outer membrane proteins ompa and ompc are packed at specific2 sites in the shigella phage sf6 virion as structural components
38 | c3kvnA_ |
| not modelled | 42.1 | 11 | PDB header:hydrolase Chain: A: PDB Molecule:esterase esta; PDBTitle: crystal structure of the full-length autotransporter esta from2 pseudomonas aeruginosa
39 | d1osma_ |
| not modelled | 36.3 | 12 | Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin
40 | d2fgqx1 |
| not modelled | 31.5 | 16 | Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin
41 | d3cdda2 |
| not modelled | 29.6 | 11 | Fold:Phage tail proteins Superfamily:Phage tail proteins Family:Baseplate protein-like
42 | d1phoa_ |
| not modelled | 25.6 | 12 | Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin
43 | d3d37a1 |
| not modelled | 25.0 | 12 | Fold:Phage tail proteins Superfamily:Phage tail proteins Family:Baseplate protein-like
44 | d2a1ja1 |
| not modelled | 18.8 | 40 | Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Hef domain-like
45 | c2y0hA_ |
| not modelled | 12.9 | 12 | PDB header:transport protein Chain: A: PDB Molecule:probable porin; PDBTitle: crystal structure of pseudomonas aeruginosa opdl
46 | c2qtkB_ |
| not modelled | 12.3 | 12 | PDB header:membrane protein Chain: B: PDB Molecule:probable porin; PDBTitle: crystal structure of the outer membrane protein opdk from2 pseudomonas aeruginosa
47 | c3t7yB_ |
| not modelled | 11.5 | 15 | PDB header:protein transport Chain: B: PDB Molecule:yop proteins translocation protein u; PDBTitle: structure of an autocleavage-inactive mutant of the cytoplasmic domain2 of ct091, the yscu homologue of chlamydia trachomatis
48 | c3jtyB_ |
| not modelled | 11.4 | 13 | PDB header:transport protein Chain: B: PDB Molecule:benf-like porin; PDBTitle: crystal structure of a benf-like porin from pseudomonas fluorescens2 pf-5
49 | d2zfga1 |
| not modelled | 9.8 | 18 | Fold:Transmembrane beta-barrels Superfamily:Porins Family:Porin
50 | d1gm5a2 |
| not modelled | 9.1 | 30 | Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:RecG "wedge" domain
51 | c3cddD_ |
| not modelled | 9.0 | 12 | PDB header:structural protein Chain: D: PDB Molecule:prophage muso2, 43 kda tail protein; PDBTitle: crystal structure of prophage muso2, 43 kda tail protein from2 shewanella oneidensis
52 | d1viga_ |
| not modelled | 8.5 | 17 | Fold:Eukaryotic type KH-domain (KH-domain type I) Superfamily:Eukaryotic type KH-domain (KH-domain type I) Family:Eukaryotic type KH-domain (KH-domain type I)
53 | c3c00B_ |
| not modelled | 8.5 | 15 | PDB header:membrane protein, protein transport Chain: B: PDB Molecule:escu; PDBTitle: crystal structural of the mutated g247t escu/spas c-terminal domain
54 | c1wruA_ |
| not modelled | 8.5 | 16 | PDB header:structural protein Chain: A: PDB Molecule:43 kda tail protein; PDBTitle: structure of central hub elucidated by x-ray analysis of gene product2 44; baseplate component of bacteriophage mu
55 | d3bzra1 |
| not modelled | 8.5 | 21 | Fold:EscU C-terminal domain-like Superfamily:EscU C-terminal domain-like Family:EscU C-terminal domain-like
56 | c3bzrA_ |
| not modelled | 8.5 | 21 | PDB header:membrane protein, protein transport Chain: A: PDB Molecule:escu; PDBTitle: crystal structure of escu c-terminal domain with n262d mutation, space2 group p 41 21 2
57 | c3adyA_ |
| not modelled | 8.3 | 20 | PDB header:proton transport Chain: A: PDB Molecule:dotd; PDBTitle: crystal structure of dotd from legionella
58 | c3sljA_ |
| not modelled | 8.0 | 13 | PDB header:protein transport Chain: A: PDB Molecule:serine protease espp; PDBTitle: pre-cleavage structure of the autotransporter espp - n1023a mutant
59 | c2vt1B_ |
| not modelled | 7.9 | 19 | PDB header:membrane protein Chain: B: PDB Molecule:surface presentation of antigens protein spas; PDBTitle: crystal structure of the cytoplasmic domain of spa40, the2 specificity switch for the shigella flexneri type iii3 secretion system
60 | d1pyya2 |
| not modelled | 7.3 | 12 | Fold:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Superfamily:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Family:Penicillin-binding protein 2x (pbp-2x), c-terminal domain
61 | c3cinA_ |
| not modelled | 7.1 | 20 | PDB header:isomerase Chain: A: PDB Molecule:myo-inositol-1-phosphate synthase-related protein; PDBTitle: crystal structure of a myo-inositol-1-phosphate synthase-related2 protein (tm_1419) from thermotoga maritima msb8 at 1.70 a resolution
62 | c1pmdA_ |
| not modelled | 6.9 | 12 | PDB header:peptidoglycan synthesis Chain: A: PDB Molecule:peptidoglycan synthesis multifunctional enzyme; PDBTitle: penicillin-binding protein 2x (pbp-2x)
63 | d1i78a_ |
| not modelled | 6.6 | 8 | Fold:Transmembrane beta-barrels Superfamily:OMPT-like Family:Outer membrane protease OMPT
64 | d1wrua2 |
| not modelled | 6.5 | 12 | Fold:Phage tail proteins Superfamily:Phage tail proteins Family:Baseplate protein-like
65 | c3c01H_ |
| not modelled | 6.4 | 20 | PDB header:membrane protein, protein transport Chain: H: PDB Molecule:surface presentation of antigens protein spas; PDBTitle: crystal structural of native spas c-terminal domain
66 | c1n0wB_ |
| not modelled | 6.4 | 63 | PDB header:gene regulation/antitumor protein Chain: B: PDB Molecule:breast cancer type 2 susceptibility protein; PDBTitle: crystal structure of a rad51-brca2 brc repeat complex
67 | d1rp5a2 |
| not modelled | 6.3 | 9 | Fold:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Superfamily:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Family:Penicillin-binding protein 2x (pbp-2x), c-terminal domain
68 | c3ov5A_ |
| not modelled | 6.3 | 24 | PDB header:protein transport Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: atomic structure of the xanthomonas citri virb7 globular domain.
69 | d2ctma1 |
| not modelled | 6.2 | 16 | Fold:Eukaryotic type KH-domain (KH-domain type I) Superfamily:Eukaryotic type KH-domain (KH-domain type I) Family:Eukaryotic type KH-domain (KH-domain type I)
70 | d2aq0a1 |
| not modelled | 6.1 | 31 | Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Hef domain-like
71 | c3nsgA_ |
| not modelled | 6.0 | 16 | PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein f; PDBTitle: crystal structure of ompf, an outer membrane protein from salmonella2 typhi
72 | c3a2rX_ |
| not modelled | 6.0 | 10 | PDB header:membrane protein Chain: X: PDB Molecule:outer membrane protein ii; PDBTitle: crystal structure of outer membrane protein porb from neisseria2 meningitidis
73 | c2qomB_ |
| not modelled | 5.9 | 11 | PDB header:hydrolase Chain: B: PDB Molecule:serine protease espp; PDBTitle: the crystal structure of the e.coli espp autotransporter beta-domain.
74 | c1zq1B_ |
| not modelled | 5.9 | 15 | PDB header:lyase Chain: B: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit d; PDBTitle: structure of gatde trna-dependent amidotransferase from2 pyrococcus abyssi
75 | c2y0lA_ |
| not modelled | 5.9 | 11 | PDB header:transport protein Chain: A: PDB Molecule:cis-aconitate porin opdh; PDBTitle: crystal structure of pseudomonas aeruginosa opdo
76 | d1okja1 |
| not modelled | 5.7 | 32 | Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:YeaZ-like
77 | d2b59b2 |
| not modelled | 5.7 | 19 | Fold:Prealbumin-like Superfamily:Carboxypeptidase regulatory domain-like Family:Pre-dockerin domain
78 | d1k25a2 |
| not modelled | 5.6 | 9 | Fold:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Superfamily:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Family:Penicillin-binding protein 2x (pbp-2x), c-terminal domain

Binding site prediction |

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
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Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0