BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (646 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P13518 Uncharacterized protein yhdA n=154 Tax=Enterobac... 1333 0.0 UniRef50_Q2NWP5 Putative uncharacterized protein n=1 Tax=Sodalis... 590 e-167 UniRef50_D0I546 MSHA biogenesis protein MshH n=1 Tax=Grimontia h... 393 e-107 UniRef50_B5FGN2 Diguanylate cyclase/phosphodiesterase domain 1 n... 358 4e-97 UniRef50_A5F8T0 MSHA biogenesis protein MshH n=59 Tax=Vibrionale... 348 5e-94 UniRef50_A4SSM9 GGDEF/EAL domain protein n=2 Tax=Aeromonas RepID... 328 5e-88 UniRef50_A6FG29 Putative MSHA biogenesis protein MshH n=1 Tax=Mo... 266 1e-69 UniRef50_Q1ZIS7 Putative MSHA biogenesis protein MshH n=1 Tax=Ps... 257 1e-66 UniRef50_Q12IU8 Diguanylate cyclase/phosphodiesterase n=21 Tax=S... 253 1e-65 UniRef50_B8CM59 GGDEF domain protein n=5 Tax=Shewanella RepID=B8... 143 2e-32 UniRef50_A1U693 Diguanylate cyclase/phosphodiesterase n=3 Tax=Ma... 142 3e-32 UniRef50_UPI000190BF13 regulatory protein CsrD n=1 Tax=Salmonell... 135 6e-30 UniRef50_Q21MK1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 134 1e-29 UniRef50_Q0EZM0 Putative uncharacterized protein n=1 Tax=Maripro... 134 1e-29 UniRef50_A1S6M8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sh... 129 4e-28 UniRef50_Q081P8 Diguanylate cyclase/phosphodiesterase n=2 Tax=Sh... 128 8e-28 UniRef50_Q2S9M3 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 127 2e-27 UniRef50_Q12GR9 Diguanylate cyclase/phosphodiesterase n=2 Tax=Co... 126 2e-27 UniRef50_A8H535 Diguanylate cyclase/phosphodiesterase n=8 Tax=Sh... 125 7e-27 UniRef50_Q31J69 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 124 8e-27 UniRef50_B3PD33 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 123 3e-26 UniRef50_B7RZX6 Cyclic diguanylate phosphodiesterase domain prot... 122 4e-26 UniRef50_A3QEN3 Diguanylate cyclase/phosphodiesterase n=4 Tax=Sh... 121 1e-25 UniRef50_B8GU61 Signal transduction protein containing a membran... 120 1e-25 UniRef50_Q15WY3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 120 2e-25 UniRef50_Q482U2 GGDEF/EAL domain protein n=1 Tax=Colwellia psych... 115 4e-24 UniRef50_UPI000169AB40 putative diguanylate cyclase/cyclic digua... 115 7e-24 UniRef50_Q47K14 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 114 9e-24 UniRef50_A6W234 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 114 9e-24 UniRef50_Q47AP8 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 112 4e-23 UniRef50_B1Y236 Diguanylate cyclase/phosphodiesterase with PAS/P... 112 4e-23 UniRef50_Q3IKD7 Putative membrane protein n=3 Tax=Alteromonadale... 111 7e-23 UniRef50_B8GN37 Diguanylate cyclase/phosphodiesterase with PAS/P... 111 7e-23 UniRef50_B0TEB0 Pas sensor diguanylate cyclase/phophodiesterase ... 110 1e-22 UniRef50_C3X6Z6 Predicted protein n=2 Tax=Oxalobacter formigenes... 110 2e-22 UniRef50_Q21LK5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 110 2e-22 UniRef50_D0I8X1 GGDEF and EAL domain-containing protein n=1 Tax=... 110 2e-22 UniRef50_B9MBY4 Diguanylate cyclase/phosphodiesterase with PAS/P... 110 2e-22 UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/P... 109 3e-22 UniRef50_C6MD86 Diguanylate cyclase/phosphodiesterase with PAS/P... 108 5e-22 UniRef50_Q1PVH4 Conserved hypothetical response regulator protei... 108 5e-22 UniRef50_B5JW24 PAS sensor diguanylate cyclase and phophodiester... 108 8e-22 UniRef50_C8VWV7 Diguanylate cyclase/phosphodiesterase with PAS/P... 108 8e-22 UniRef50_A5IG87 Two component histidine kinase, GGDEF domain pro... 107 1e-21 UniRef50_Q3SME1 Putative diguanylate cyclase/phosphodiesterase (... 107 1e-21 UniRef50_Q6AQX8 Putative uncharacterized protein n=1 Tax=Desulfo... 106 3e-21 UniRef50_Q56669 Mannose-sensitive hemagglutinin D (mshD) (Fragme... 106 3e-21 UniRef50_B9Z392 Response regulator receiver modulated diguanylat... 106 3e-21 UniRef50_Q1H2A5 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 106 4e-21 UniRef50_C0QUQ4 Response regulator receiver modulated diguanylat... 105 6e-21 UniRef50_B9L5S2 Sensory box/ggdef family protein n=1 Tax=Nautili... 105 6e-21 UniRef50_A4A7F0 Protein containing EAL/GGDEF/PAS domains n=1 Tax... 105 7e-21 UniRef50_C6X8Z9 Diguanylate cyclase/phosphodiesterase with PAS/P... 105 8e-21 UniRef50_Q1PXY5 Putative uncharacterized protein n=1 Tax=Candida... 104 1e-20 UniRef50_C0N942 Cyclic diguanylate phosphodiesterase domain prot... 104 1e-20 UniRef50_UPI0001C30E99 diguanylate cyclase/phosphodiesterase wit... 103 2e-20 UniRef50_A0KLQ5 Diguanylate cyclase/phosphodiesterase domain 1 n... 103 2e-20 UniRef50_C6MWA0 Diguanylate cyclase/phosphodiesterase with extra... 103 3e-20 UniRef50_A9L3T6 Diguanylate cyclase/phosphodiesterase n=12 Tax=S... 102 4e-20 UniRef50_B2V685 Diguanylate cyclase/phosphodiesterase n=3 Tax=Su... 102 4e-20 UniRef50_C8W213 Diguanylate cyclase/phosphodiesterase with PAS/P... 102 4e-20 UniRef50_A6VZ59 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 102 5e-20 UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus... 102 5e-20 UniRef50_Q67NQ9 Putative uncharacterized protein n=1 Tax=Symbiob... 101 7e-20 UniRef50_C8QYF1 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 100 2e-19 UniRef50_A1SWS3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 100 2e-19 UniRef50_B8GSV3 Signal transduction protein containing a membran... 100 2e-19 UniRef50_C5BTR2 PAS sensor diguanylate cyclase/phophodiesterase ... 100 3e-19 UniRef50_A1SX34 Diguanylate cyclase/phosphodiesterase with PAS/P... 99 5e-19 UniRef50_B4X4M1 PAS fold family n=2 Tax=Alcanivorax RepID=B4X4M1... 99 6e-19 UniRef50_C8R1Y2 Response regulator receiver modulated diguanylat... 99 6e-19 UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsul... 99 8e-19 UniRef50_Q2C9G6 Putative uncharacterized protein n=2 Tax=Photoba... 98 9e-19 UniRef50_C1SKJ1 Diguanylate cyclase (GGDEF) domain-containing pr... 97 1e-18 UniRef50_A3IWQ8 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 97 2e-18 UniRef50_C6W9U5 Diguanylate cyclase/phosphodiesterase with PAS/P... 97 2e-18 UniRef50_UPI0001C31379 diguanylate cyclase/phosphodiesterase wit... 97 2e-18 UniRef50_A8UVA1 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 97 2e-18 UniRef50_Q3JE85 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ni... 97 3e-18 UniRef50_A3VS31 Putative uncharacterized protein n=1 Tax=Parvula... 96 3e-18 UniRef50_A4XTA6 Diguanylate cyclase/phosphodiesterase n=23 Tax=c... 96 4e-18 UniRef50_A3YC66 Putative uncharacterized protein n=1 Tax=Marinom... 96 5e-18 UniRef50_C7RPI2 Diguanylate cyclase/phosphodiesterase with extra... 96 6e-18 UniRef50_Q5P6G6 Putative uncharacterized protein n=2 Tax=Rhodocy... 96 6e-18 UniRef50_A6V917 Membrane protein, putative n=6 Tax=Pseudomonas a... 96 6e-18 UniRef50_Q31HK1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 95 7e-18 UniRef50_Q67KG5 Putative uncharacterized protein n=1 Tax=Symbiob... 95 7e-18 UniRef50_Q0AB93 Diguanylate cyclase/phosphodiesterase with PAS/P... 95 1e-17 UniRef50_B7K4E7 Response regulator receiver modulated diguanylat... 95 1e-17 UniRef50_B4RS68 Diguanylate cyclase/phosphodiesterase n=4 Tax=Al... 95 1e-17 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 94 1e-17 UniRef50_D0I7X8 GGDEF and EAL domain-containing protein n=1 Tax=... 94 1e-17 UniRef50_C3VA06 Putative phospholipase A2 family protein n=1 Tax... 94 1e-17 UniRef50_C9R8T9 Diguanylate cyclase/phosphodiesterase with GAF s... 94 2e-17 UniRef50_B3PKS7 Diguanylate cyclase/phosphodiesterase domain 2 (... 94 2e-17 UniRef50_C7RNJ0 Diguanylate cyclase/phosphodiesterase with PAS/P... 94 2e-17 UniRef50_C6WW34 Response regulator receiver modulated diguanylat... 93 2e-17 UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 93 3e-17 UniRef50_C6WYS6 Diguanylate cyclase/phosphodiesterase with PAS/P... 93 3e-17 UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n... 93 3e-17 UniRef50_B9YYD0 Diguanylate cyclase/phosphodiesterase with extra... 93 3e-17 UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/P... 93 4e-17 UniRef50_B9R245 Putative uncharacterized protein n=1 Tax=Labrenz... 93 4e-17 UniRef50_A6F7G4 PAS sensor diguanylate cyclase and phophodiester... 93 4e-17 UniRef50_D2SHC8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ge... 92 4e-17 UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 92 4e-17 UniRef50_Q7MI32 C-di-GMP phosphodiesterase A-related protein n=4... 92 5e-17 UniRef50_C1SGC5 Diguanylate cyclase (GGDEF) domain-containing pr... 92 6e-17 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 92 6e-17 UniRef50_B8KKA6 Putative uncharacterized protein n=1 Tax=gamma p... 92 6e-17 UniRef50_Q07XP4 Response regulator receiver modulated diguanylat... 92 7e-17 UniRef50_Q474K3 Diguanylate cyclase/phosphodiesterase with PAS/P... 92 9e-17 UniRef50_C5V4D1 Diguanylate cyclase/phosphodiesterase with extra... 92 9e-17 UniRef50_Q2SJ14 Predicted signal transduction protein containing... 92 9e-17 UniRef50_Q7MQJ2 GGDEF family protein n=2 Tax=Vibrio vulnificus R... 91 1e-16 UniRef50_A2V149 Diguanylate cyclase n=1 Tax=Shewanella putrefaci... 91 1e-16 UniRef50_Q3J9L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 91 1e-16 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 91 1e-16 UniRef50_Q2Y8Q9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 91 1e-16 UniRef50_D0L1D4 Diguanylate cyclase/phosphodiesterase with PAS/P... 91 1e-16 UniRef50_Q2BCE5 Putative uncharacterized protein n=3 Tax=Bacillu... 91 2e-16 UniRef50_C9R830 Diguanylate cyclase/phosphodiesterase n=1 Tax=Am... 91 2e-16 UniRef50_A4XNW2 Diguanylate cyclase/phosphodiesterase n=22 Tax=P... 91 2e-16 UniRef50_A6SZI8 Uncharacterized conserved protein n=3 Tax=Oxalob... 90 2e-16 UniRef50_A6D0T4 Putative uncharacterized protein n=1 Tax=Vibrio ... 90 2e-16 UniRef50_A8UR98 Sensory box/GGDEF family protein n=1 Tax=Hydroge... 90 3e-16 UniRef50_C8VVE0 Diguanylate cyclase/phosphodiesterase with PAS/P... 90 3e-16 UniRef50_A1S2J3 Diguanylate cyclase/phosphodiesterase with PAS/P... 90 3e-16 UniRef50_A4CBU9 Putative uncharacterized protein n=1 Tax=Pseudoa... 90 3e-16 UniRef50_Q7MDD9 Predicted signal transduction protein n=12 Tax=P... 90 3e-16 UniRef50_B8GQI8 Signal transduction protein containing a membran... 90 3e-16 UniRef50_A0Q544 Signal transduction protein with a PAS, a PAC, a... 90 3e-16 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 89 4e-16 UniRef50_A6CVM5 Putative uncharacterized protein n=1 Tax=Vibrio ... 89 5e-16 UniRef50_A4SLY8 GGDEF/EAL domain protein n=2 Tax=Aeromonas RepID... 89 5e-16 UniRef50_Q67RI1 Putative uncharacterized protein n=1 Tax=Symbiob... 89 6e-16 UniRef50_B1KCF3 Diguanylate cyclase/phosphodiesterase with PAS/P... 89 6e-16 UniRef50_D0IWU4 Diguanylate cyclase/phosphodiesterase with n=3 T... 89 6e-16 UniRef50_B6BNW2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 89 6e-16 UniRef50_A2SGZ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 89 7e-16 UniRef50_C6P353 Diguanylate cyclase/phosphodiesterase n=1 Tax=Si... 89 7e-16 UniRef50_D1CDW9 Diguanylate cyclase/phosphodiesterase with PAS/P... 89 7e-16 UniRef50_B4RSR4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Al... 89 8e-16 UniRef50_A0Z5D2 Putative uncharacterized protein n=1 Tax=marine ... 88 8e-16 UniRef50_C6MI98 Diguanylate cyclase/phosphodiesterase with PAS/P... 88 9e-16 UniRef50_Q2P5I3 Putative uncharacterized protein XOO1439 n=9 Tax... 88 1e-15 UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 ... 88 1e-15 UniRef50_A6CPZ0 Putative uncharacterized protein n=1 Tax=Bacillu... 88 1e-15 UniRef50_UPI0001C31434 diguanylate cyclase/phosphodiesterase wit... 88 1e-15 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 88 1e-15 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 88 1e-15 UniRef50_B9MQD5 Diguanylate cyclase/phosphodiesterase with PAS/P... 87 1e-15 UniRef50_A8UY37 Predicted signal transduction protein n=1 Tax=Hy... 87 1e-15 UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/P... 87 1e-15 UniRef50_D2LWI2 Diguanylate cyclase/phosphodiesterase with extra... 87 1e-15 UniRef50_B9JZ37 GGDEF family protein n=1 Tax=Agrobacterium vitis... 87 2e-15 UniRef50_Q2BQ13 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 87 2e-15 UniRef50_B9ZMB9 Diguanylate cyclase/phosphodiesterase with PAS/P... 87 2e-15 UniRef50_C5BN58 Predicted signal transduction protein, with PAS,... 87 2e-15 UniRef50_Q087E2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Al... 87 2e-15 UniRef50_D2M2P9 Diguanylate cyclase/phosphodiesterase with PAS/P... 87 2e-15 UniRef50_Q3ILC0 Putative orphan protein ; putative sensory-box d... 87 3e-15 UniRef50_C1D4V4 AL:histidine kinase, HAMP region n=2 Tax=Neisser... 87 3e-15 UniRef50_Q0AAU4 Response regulator receiver modulated diguanylat... 87 3e-15 UniRef50_Q2SLT6 Predicted signal transduction protein containing... 87 3e-15 UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 87 3e-15 UniRef50_C7RQM1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 86 3e-15 UniRef50_C0N6D3 Putative uncharacterized protein n=1 Tax=Methylo... 86 3e-15 UniRef50_C5EJC7 Putative uncharacterized protein n=1 Tax=Clostri... 86 3e-15 UniRef50_B7V348 FimX n=9 Tax=Pseudomonas RepID=B7V348_PSEA8 86 3e-15 UniRef50_C4KCC9 Response regulator receiver modulated diguanylat... 86 3e-15 UniRef50_C0QA93 Signal transduction family protein (GGDEF domain... 86 3e-15 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 86 4e-15 UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/P... 86 4e-15 UniRef50_A6Q3C0 Signal transduction response regulator n=1 Tax=N... 86 4e-15 UniRef50_A4XFJ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 86 4e-15 UniRef50_Q4KFG2 Sensory box-containing diguanylate cyclase, puta... 86 4e-15 UniRef50_C6P569 Diguanylate cyclase/phosphodiesterase with PAS/P... 86 4e-15 UniRef50_C0N8Q5 Cyclic diguanylate phosphodiesterase domain prot... 86 4e-15 UniRef50_B9ZS13 Diguanylate cyclase/phosphodiesterase with extra... 86 4e-15 UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 86 4e-15 UniRef50_A0L8L0 Diguanylate cyclase/phosphodiesterase with PAS/P... 86 4e-15 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 86 5e-15 UniRef50_B1Y3Y1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Le... 86 5e-15 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 86 5e-15 UniRef50_Q0F3I9 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 86 5e-15 UniRef50_B7KGZ9 Response regulator receiver modulated diguanylat... 86 5e-15 UniRef50_A3QBK2 Response regulator receiver modulated diguanylat... 86 5e-15 UniRef50_Q31DY5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 86 5e-15 UniRef50_Q2SQ18 Predicted signal transduction protein containing... 86 5e-15 UniRef50_C4L8V0 Diguanylate cyclase/phosphodiesterase n=1 Tax=To... 86 6e-15 UniRef50_C7RL13 Diguanylate cyclase/phosphodiesterase with extra... 86 6e-15 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 85 7e-15 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 85 7e-15 UniRef50_C0QSJ8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 85 9e-15 UniRef50_C6X941 Response regulator receiver modulated diguanylat... 85 9e-15 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 85 9e-15 UniRef50_A4BL55 Predicted signal transduction protein containing... 85 9e-15 UniRef50_Q30VT6 Diguanylate cyclase/phosphodiesterase with PAS/P... 85 9e-15 UniRef50_B9QZL6 Cyclic diguanylate phosphodiesterase domain prot... 85 1e-14 UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 85 1e-14 UniRef50_B2UGH6 Diguanylate cyclase/phosphodiesterase with PAS/P... 85 1e-14 UniRef50_A7GAB5 Multisensor diguanylate cyclase/phophodiesterase... 85 1e-14 UniRef50_Q2BQQ4 Signaling protein with a sensor domain, CHASE, G... 85 1e-14 UniRef50_Q30UH2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ca... 85 1e-14 UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsul... 85 1e-14 UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Ba... 85 1e-14 UniRef50_C5SFB8 Diguanylate cyclase/phosphodiesterase n=1 Tax=As... 85 1e-14 UniRef50_Q21RL1 Periplasmic sensor diguanylate cyclase/phosphodi... 85 1e-14 UniRef50_C6HUY5 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 84 1e-14 UniRef50_A1K7N9 GGDEF/EAL/PAS-domain containing protein n=1 Tax=... 84 1e-14 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 84 1e-14 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 84 1e-14 UniRef50_B8KRF7 Ggdef:eal:histidine kinase, hamp region n=1 Tax=... 84 1e-14 UniRef50_C6XCG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 84 1e-14 UniRef50_Q21DZ3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 84 1e-14 UniRef50_C5D2S1 Diguanylate cyclase/phosphodiesterase with PAS/P... 84 1e-14 UniRef50_Q47EJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 84 1e-14 UniRef50_B8GPR3 Signal transduction protein n=2 Tax=Thioalkalivi... 84 1e-14 UniRef50_C5SC92 Diguanylate cyclase/phosphodiesterase with PAS/P... 84 2e-14 UniRef50_Q6LLM3 Hipothetical sensory box/GGDEF family protein n=... 84 2e-14 UniRef50_C6XBN5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 84 2e-14 UniRef50_A6SWF4 Sensory box protein n=1 Tax=Janthinobacterium sp... 84 2e-14 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 84 2e-14 UniRef50_B9ZM78 Diguanylate cyclase/phosphodiesterase with PAS/P... 84 2e-14 UniRef50_A3WM41 Signaling protein with a ligand binding sensor d... 84 2e-14 UniRef50_Q2YC85 Diguanylate cyclase/phosphodiesterase with PAS/P... 84 2e-14 UniRef50_A6VUG3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 84 2e-14 UniRef50_C4I4I7 Sensory box/ggdef/eal domain protein n=36 Tax=Bu... 84 2e-14 UniRef50_C6XA09 Diguanylate cyclase/phosphodiesterase with extra... 84 2e-14 UniRef50_B8INP3 Diguanylate cyclase/phosphodiesterase with PAS/P... 84 2e-14 UniRef50_B9L207 Developmental regulator MorA n=1 Tax=Thermomicro... 84 2e-14 UniRef50_C9QFQ1 Sensory box/GGDEF family protein n=1 Tax=Vibrio ... 84 2e-14 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 84 2e-14 UniRef50_Q3SIU2 Putative diguanylate cyclase/phosphodiesterase (... 84 2e-14 UniRef50_Q1NNT1 GGDEF:EAL n=2 Tax=delta proteobacterium MLMS-1 R... 84 2e-14 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 83 3e-14 UniRef50_C6PPB4 Diguanylate cyclase/phosphodiesterase with PAS/P... 83 3e-14 UniRef50_C0QQR2 Response regulator receiver modulated diguanylat... 83 3e-14 UniRef50_Q12JD4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Sh... 83 3e-14 UniRef50_B1LTA1 Diguanylate cyclase/phosphodiesterase with PAS/P... 83 3e-14 UniRef50_B9ZQW5 Diguanylate cyclase/phosphodiesterase with extra... 83 3e-14 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 83 3e-14 UniRef50_Q5QW01 Intracellular signaling protein (GAF,PAS,GGDEF,E... 83 3e-14 UniRef50_Q15YI2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 83 3e-14 UniRef50_B9JAE4 GGDEF family protein n=1 Tax=Agrobacterium radio... 83 3e-14 UniRef50_B9M6C9 Response regulator receiver modulated diguanylat... 83 3e-14 UniRef50_A0LUU6 Diguanylate cyclase/phosphodiesterase with GAF s... 83 3e-14 UniRef50_C6C4P4 Diguanylate cyclase/phosphodiesterase with MHYT ... 83 3e-14 UniRef50_A1SSA6 Diguanylate cyclase/phosphodiesterase with PAS/P... 83 3e-14 >UniRef50_P13518 Uncharacterized protein yhdA n=154 Tax=Enterobacteriaceae RepID=YHDA_ECOLI Length = 646 Score = 1333 bits (3451), Expect = 0.0, Method: Compositional matrix adjust. Identities = 646/646 (100%), Positives = 646/646 (100%) Query: 1 MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFSV 60 MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFSV Sbjct: 1 MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFSV 60 Query: 61 LRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLR 120 LRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLR Sbjct: 61 LRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLR 120 Query: 121 LVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGER 180 LVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGER Sbjct: 121 LVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGER 180 Query: 181 GSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDN 240 GSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDN Sbjct: 181 GSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDN 240 Query: 241 QLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGAL 300 QLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGAL Sbjct: 241 QLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGAL 300 Query: 301 LARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDT 360 LARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDT Sbjct: 301 LARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDT 360 Query: 361 EQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV 420 EQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV Sbjct: 361 EQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV 420 Query: 421 TREGQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL 480 TREGQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL Sbjct: 421 TREGQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL 480 Query: 481 AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALG 540 AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALG Sbjct: 481 AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALG 540 Query: 541 VRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQV 600 VRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQV Sbjct: 541 VRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQV 600 Query: 601 YATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV 646 YATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV Sbjct: 601 YATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV 646 >UniRef50_Q2NWP5 Putative uncharacterized protein n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NWP5_SODGM Length = 648 Score = 590 bits (1520), Expect = e-167, Method: Compositional matrix adjust. Identities = 308/645 (47%), Positives = 424/645 (65%), Gaps = 6/645 (0%) Query: 1 MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFSV 60 MRL + SA + L + L G +LS++ Q + ++ A+A + D +++ S Sbjct: 1 MRLNVRLSAMTAMFCALVTLLMLAGSALSYFRLHQQRLDRQLTAMADSFDRLMLTEPLSS 60 Query: 61 LRPQITELMMSADIVRVDLLHGDKQVYTLA---RNGSYRPVGSSDLFRELSVPLIKHPGM 117 + P + M SA I ++ L + VY LA NG P+ SD R+ +PL +HP Sbjct: 61 MTPWLPLAMDSAGITQLTLQRQGETVYRLALPPGNGRGDPL--SDTQRQRELPLPRHPDY 118 Query: 118 SLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILN 177 L + Y D + + HSL TAP++ A+G IIV LFLA+RWL+RQ+ QE LETRA RI+ Sbjct: 119 RLVISYTDTLASDVHSLRATAPVSVALGLIIVFLFLALRWLRRQIQPQESLETRARRIIY 178 Query: 178 GERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLF 237 GER NV E P T SA+D LLR++ AREQ SR+D LIR++AAQD +TGL NRL Sbjct: 179 GER-DNVGEQPDEMPTLTGSAIDRLLRDLAQAREQRSRVDILIRAFAAQDARTGLTNRLS 237 Query: 238 FDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYP 297 F++QLA LED + VG HG+V++I PD L + G + L NL+S + RYP Sbjct: 238 FESQLALQLEDNQDVGAHGVVLLIMRPDPERLVERLGPTHAAAIDGALINLVSVSLKRYP 297 Query: 298 GALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSG 357 ALLA Y R D A LLPHR+LKEAES+ QL+ A+ LP+ RDD++HIG+ A+R G Sbjct: 298 DALLAHYFRDDLAVLLPHRSLKEAESLTQQLLGALAILPDIPATCRDDLLHIGVSAYRPG 357 Query: 358 QDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQK 417 Q +VME AE A R AGLQGGN W++YD+ +P++ RGNV+WRTL+E L+ GGP+L + Sbjct: 358 QTAVEVMESAEHAAREAGLQGGNGWSVYDNRVPQQARGNVKWRTLLENTLAGGGPQLLIR 417 Query: 418 PAVTREGQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPE 477 PA R+G + H ++ RI DG + +++AE++P++ Q GL + Y+R Q+ RLI LL P Sbjct: 418 PAFGRDGALDHYVVINRIHDGGDTLTAAEFLPVMRQLGLVQRYERQQLLRLIALLSQLPG 477 Query: 478 ENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVN 537 L+I V+V+SL++ F+RWLRDTLMQC K R +I+ EL EAD+ QH+ L+P +RL+ Sbjct: 478 VVLSIAVSVDSLLQRDFRRWLRDTLMQCGKLMRSQIMFELVEADLCQHLEPLRPALRLLA 537 Query: 538 ALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTS 597 LG + VN+AG+TLVST +I + + ++KLHPGLVR+I++R ENQL VQSL EAC GT Sbjct: 538 GLGCLLTVNRAGMTLVSTGYISLVPISVIKLHPGLVRDIDQRQENQLFVQSLPEACLGTR 597 Query: 598 TQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 T+V+ATGVRS EWQTL+ V GG+GDFFA PL +KKYS+ Sbjct: 598 TRVFATGVRSVREWQTLLDNAVAGGEGDFFAPIAPLGELLKKYSR 642 >UniRef50_D0I546 MSHA biogenesis protein MshH n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I546_VIBHO Length = 651 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 242/649 (37%), Positives = 373/649 (57%), Gaps = 32/649 (4%) Query: 1 MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHL---VSND 57 M+LT + AFVTL+ +FV +G ++SF SH + V T IDT + VSND Sbjct: 7 MKLTNRLVAFVTLIVVCAMFVLFIGGAISFRKLGTDFLSHYLGEVVTEIDTAIANPVSND 66 Query: 58 -FSVLRPQITELMMSADIVRVD------LLHGDKQVYTLARNGSYRPVGSSDLFRELSVP 110 S+ PQ L+ ++DIV ++ LL+ +Q+YT A+ P+ E Sbjct: 67 NISLWLPQ---LLKASDIVELEISSKTGLLYRYEQIYTTAK-----PLE----LIENHFD 114 Query: 111 LIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLET 170 L +PG + + P ++ +S+ + L+ A+ I++ L+ ++WL+ QL G ELLE Sbjct: 115 LPNNPGFYITIKSVPPYADFAYSIGAMSSLSLAVLVIVLALYWGIKWLRTQLIGAELLEH 174 Query: 171 RATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKT 230 R IL G G EWP S ALD ++ E+++AR++ SR DT IRS D T Sbjct: 175 RGRLILAGRAEDVHTGDEREWPGTASLALDQMIAELRDARQERSRFDTFIRSNTFLDKIT 234 Query: 231 GLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLS 290 G NR+ FDN+L TLL+D+ G G V+M+++ D++ L+ G E + N+LS Sbjct: 235 GAANRVMFDNRLQTLLQDK---GAQGAVLMLQIGDWDTLNHELGKEGANEWVKEVGNVLS 291 Query: 291 TFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIG 350 ++R+P A+LARY+ ++FA LL H++ K+A A QL+KA+ L + LD ++ H+G Sbjct: 292 NAILRFPDAVLARYYDTEFAILLSHQSAKDARLFANQLMKALARLTPPRALDGENWAHMG 351 Query: 351 ICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSL--PEKGRGNVRWRTLIEQMLS 408 + + +G+ ++ME + A R+A LQG N W + E GRG+VRWRTL+ ++ Sbjct: 352 MTFFTTGERRGRLMEEVDMAKRSAVLQGSNGWYAFKKETVSDEAGRGSVRWRTLLTRVFE 411 Query: 409 RGGPRLYQKPAVTREGQVHHRELMCRIFDGNEEV-SSAEYMPMVLQFGLSEEYDRLQISR 467 +GGP LY++ +G H EL+ RI D N + ++ ++ V G++ + DR +S+ Sbjct: 412 QGGPDLYRQVMKDVDGHDLHIELLARIKDENGLIIKASRFLNGVELVGMNSKLDRSVVSK 471 Query: 468 LIPLLRYWP-EENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHI 526 + LL E L+I V +SL + FQ WLRD L+Q +S R+ IE++EA + +H Sbjct: 472 ALRLLSTGDGREVLSINVCAQSLGQQAFQIWLRDALLQTPRSVLNRLQIEVSEAPLVKHF 531 Query: 527 SRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLV 586 +P +R+V A G V V+QAG ++VST ++K++ + +KLH L+R+I +R ENQL V Sbjct: 532 DAARPTLRMVRAFGCAVVVDQAGRSVVSTHYVKDIQPKYIKLHRSLIRDIHQRPENQLYV 591 Query: 587 QSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFA---SSQP 632 +S++ AC TSTQV A GV S+ EW TL+Q GV GGQG F SS P Sbjct: 592 RSMLGACEPTSTQVLAVGVESQHEWNTLVQLGVMGGQGRLFGAELSSSP 640 >UniRef50_B5FGN2 Diguanylate cyclase/phosphodiesterase domain 1 n=2 Tax=Vibrio fischeri RepID=B5FGN2_VIBFM Length = 659 Score = 358 bits (919), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 210/651 (32%), Positives = 363/651 (55%), Gaps = 18/651 (2%) Query: 1 MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFS- 59 +RL+ + +FVTL+ IF+ +G ++S H + V TA+D LV+ + + Sbjct: 7 LRLSNRLISFVTLMVSAAIFILFIGGTISVKQIGTEYLDHYLTGVVTAVDEELVNPEKAK 66 Query: 60 VLRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSL 119 + + +L+ ++++V ++L +Y+ S + + ++PL + G + Sbjct: 67 SMETWLPKLLKASNVVSMELFSSTGPIYSFQ---SLAIIPDDSVLYHKTLPLQINKGYEI 123 Query: 120 RLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGE 179 P + +SL +T AI I+V L V WL++QL G ELLE R +L G+ Sbjct: 124 SFKSVPPYSAFTYSLGALFSITAAIAVIVVSLLWGVVWLRKQLHGSELLEERGRMLLAGK 183 Query: 180 RGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFD 239 +G+ EWP S ALD ++ E+++AR++ SR DT IR++ D TG NR+ FD Sbjct: 184 LDDYSIGSEEEWPATASLALDNIIAELKDARKERSRFDTFIRTHTFLDQLTGSANRVLFD 243 Query: 240 NQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGA 299 ++L ++L++ + + G+++++R+ + L + G + +E + L+ M RY + Sbjct: 244 SKLESILQESQ---SQGVLLLLRINGWEELVEEQGSAVGDELIVEVGKQLNNIMQRYSDS 300 Query: 300 LLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQD 359 +L+RY++SDFA L+P ++LKEA+S+A Q +K ++ + + LDRD+ HIG+ + SG+ Sbjct: 301 VLSRYYQSDFALLVPQQSLKEAKSLATQCLKLIEKINPPRSLDRDNWCHIGVSMFVSGER 360 Query: 360 TEQVMEHAESATRNAGLQGGNSWAIYDDS--LPEKGRGNVRWRTLIEQMLSRGGPRLYQK 417 ++ME + A R+A LQ N+W+++ L E G+VRWRTL + + + +Y++ Sbjct: 361 RGRLMEELDMAHRSALLQNNNTWSLFKKQQQLAE-SLGSVRWRTLFDAIFQQDKLIIYKQ 419 Query: 418 PAVTREGQ---VHHRELMCRIFDGNE-EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLR 473 P EG H EL RI D N ++ ++ ++P + Q G + D + ++ PLL Sbjct: 420 PTFLFEGNELAPLHLELFSRIKDENGVQIKASRFLPAIKQVGYQVKLDSAVLKQVFPLLS 479 Query: 474 YWPE---ENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQ 530 PE + ++ + V+S+ F R LR+ L+Q ++Q +R+ EL E V ++ ++ Sbjct: 480 D-PELSHHSFSVHLQVKSITNAAFIRQLRNRLLQTPRAQLQRLSFELIEGQVVTYLDAVR 538 Query: 531 PVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLV 590 PV +++ + G ++ V QAG T+VST +IK+LNV+ +KLH L+++I +R ENQL V+SL+ Sbjct: 539 PVAKMLKSFGCQLVVEQAGRTIVSTHYIKDLNVDFVKLHRSLMKDIHQRYENQLFVRSLL 598 Query: 591 EACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 AC T QV A G+ E+ L GV GGQG FF S L +K S Sbjct: 599 GACETTGAQVIAVGIEKEKEFSLLKDLGVEGGQGRFFESETALYHRQEKIS 649 >UniRef50_A5F8T0 MSHA biogenesis protein MshH n=59 Tax=Vibrionales RepID=A5F8T0_VIBC3 Length = 673 Score = 348 bits (892), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 216/643 (33%), Positives = 342/643 (53%), Gaps = 18/643 (2%) Query: 1 MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSND--F 58 ++L+T+ AFVT+ +F+ LG +LSF Q +H +Q + +D + D + Sbjct: 10 LKLSTRLVAFVTMTVISAMFILFLGGTLSFQRLGQEYLNHYLQGIVEVVDKEMEDPDAAY 69 Query: 59 SVLRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMS 118 S+ R + +++ ++ I+ + L +Y + + +S L ++++PL ++PG Sbjct: 70 SMQR-WMPKMLQASGIIEMQLTSEAGPIYRF--KDTTNTIEASRL-HQVALPLKRNPGYV 125 Query: 119 LRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNG 178 + P NY +SL T A+ I+ L ++WL+ QL G ELLE R IL G Sbjct: 126 MHFKAVPPYLNYNYSLQAMWSTTLAVLLIVFFLIRGLKWLKEQLLGSELLEERGRMILAG 185 Query: 179 ERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFF 238 + G EWP S ALD L+ E+Q+AR++ SR DT IRS D TG NR+ + Sbjct: 186 RVEQHAKGDPREWPFTASEALDRLIEELQDARQERSRFDTFIRSQTFLDQLTGTANRVLY 245 Query: 239 DNQL-ATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYP 297 D++L + LLE G HG VMM+R+ D + ++E + LS + RYP Sbjct: 246 DSKLESALLES----GAHGGVMMLRVDDLESAREESPKRTLDEFIIEVGECLSNIVQRYP 301 Query: 298 GALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSG 357 A+L+RY+ FA +PH+ K+ +A Q IK ++ + + L D+ HIG+ ++ G Sbjct: 302 DAILSRYYEDVFALFIPHQGSKDIAQVATQAIKLIERINPPEPLPEDNWFHIGVTMYQEG 361 Query: 358 QDTEQVMEHAESATRNAGLQGGNSWAIYDDSLP-EKGRGNVRWRTLIEQMLSRGGPRLYQ 416 + ++++ E+A ++A LQG N+W+ + ++ RG+VRWRTL EQ+L LY+ Sbjct: 362 ERRGRIIDEMETALKSAQLQGVNAWSRFQKPKQLQEDRGSVRWRTLFEQVLRPEEILLYR 421 Query: 417 KP----AVTREGQVHHRELMCRIFDGNEEVSSAEYMPMVLQ-FGLSEEYDRLQISRLIPL 471 + + E + H EL RI D + + A L+ G DR S ++ Sbjct: 422 QACYRISANGEREFLHYELFARIQDPQQGILKASRFSSALETVGYEAMLDRAVFSSVVSF 481 Query: 472 L-RYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQ 530 L R E L++ + V R+ RW+R+ LMQ S R + E +EA + H+ ++ Sbjct: 482 LKRSELVEPLSVNLHVVPFNDKRYARWIRNELMQMPFSLRTALSFEFSEAHLVNHLDYMR 541 Query: 531 PVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLV 590 P+IR++ LG ++ V QAG T+VST +IK+L V LKLH L++ I++R ENQL V+SLV Sbjct: 542 PIIRMLAGLGCKIVVGQAGRTIVSTHYIKDLKVNYLKLHRSLIKKIDQRHENQLFVRSLV 601 Query: 591 EACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 C GT +V A GV + EWQTL GV+G QG F Q + Sbjct: 602 GVCGGTQAEVVAVGVETTQEWQTLQMLGVSGVQGRLFDEEQQM 644 >UniRef50_A4SSM9 GGDEF/EAL domain protein n=2 Tax=Aeromonas RepID=A4SSM9_AERS4 Length = 655 Score = 328 bits (840), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 218/643 (33%), Positives = 335/643 (52%), Gaps = 18/643 (2%) Query: 1 MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHL-VSNDFS 59 M+LTT+ +F+TL ++ + LLG SF +V ++ ID L V++D Sbjct: 14 MKLTTQLVSFITLCVIASMAMVLLGGVFSFRELGMELQQKKVNSLVEVIDKQLEVADDHQ 73 Query: 60 VLRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPV---GSSDLFRELSVPLIKHPG 116 VL + L+ SA +V +++ G +++Y +R V L S P+ G Sbjct: 74 VLTRWLPTLLRSAHVVELEIRQGKQRIYW------FRDVQQQTDESLLIPYSQPISHQAG 127 Query: 117 MSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRIL 176 M + P + +S+ + ++ I +I L+ ++RWL+ QL G ELL RA IL Sbjct: 128 MQADFKLERPFKEFEYSMKAMSGISLGIFIVIFGLWYSIRWLRLQLRGAELLAERAQLIL 187 Query: 177 NGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRL 236 + + EWP S ALD LL E+ +AR++ SR D IRS A D TG+ NRL Sbjct: 188 DNKLTKLAHDPAEEWPVSASQALDHLLAELADARKERSRFDNFIRSNAFVDKMTGIGNRL 247 Query: 237 FFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRY 296 FFDN+L + + E G V++I L L Q +E + ++ F+ ++ Sbjct: 248 FFDNRLESAI--MEASVMSGGVLLIDLAGLEELDPELSGRQSQELLMEASASIAAFVRKH 305 Query: 297 PGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS 356 GAL ARY FA LLP+ + E AGQL K++ L ++ + +++G +++ Sbjct: 306 NGALQARYAGQVFAVLLPNMSESEMVDGAGQLHKSLQRLHWPAAVNVETAVYLGAVCYQA 365 Query: 357 GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK--GRGNVRWRTLIEQMLSRGGPRL 414 +V E AE A ++A LQG W +Y+ L E+ +G VRWRTLI + + G Sbjct: 366 QDSLLKVQEEAELALKSARLQGHTGWFLYEKQLDEEQSSKGTVRWRTLIGRRIEEHGIDF 425 Query: 415 YQKPAVTREGQV-HHRELMCRIFD-GNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLL 472 Y +P QV ++L+ RI D + + +MPM + GL DRL + + LL Sbjct: 426 YVQPVQQERDQVVLQQDLLIRIHDEQGRALQAGVFMPMAEKAGLLLPLDRLVAEQTLRLL 485 Query: 473 RYWPEENLAIQVTV--ESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQ 530 R+ E++ I +T+ +SL+ FQRWL L Q +S +R+I++L+EA V +H L+ Sbjct: 486 RHGSEQSCPISLTLCAQSLLHREFQRWLFFDLFQLPRSTNERLILQLSEAQVTRHYEALK 545 Query: 531 PVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLV 590 +R + LG ++A++ AG +VST +IKE + LKLHP LVR I R NQ+ V+SLV Sbjct: 546 RPLRALRMLGCQLAIDHAGQDVVSTQYIKEFEINFLKLHPSLVREIHTRQVNQMAVRSLV 605 Query: 591 EACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 C+ T T+V A GV S EW+ L GV GQG +FA + L Sbjct: 606 GGCANTRTRVIAVGVESGDEWKMLRHLGVHAGQGPWFAEPERL 648 >UniRef50_A6FG29 Putative MSHA biogenesis protein MshH n=1 Tax=Moritella sp. PE36 RepID=A6FG29_9GAMM Length = 638 Score = 266 bits (681), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 156/490 (31%), Positives = 269/490 (54%), Gaps = 8/490 (1%) Query: 143 AIGFIIVM--LFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALD 200 ++G +I + L +A+R L++ + G ELL R+ +ILNG+ +G+ EWP TS A D Sbjct: 141 SMGLLIALFGLVIAIRLLKKGMYGAELLSMRSYKILNGDHVKVAVGSESEWPKATSRAFD 200 Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 L+ ++++ +++ SR D+ +R+ A D TG+ NR FF NQL +L D + G V+ Sbjct: 201 KLIADLEDTKQERSRFDSYMRTNAFVDASTGIGNRDFFLNQLEAMLSDPGVIA--GTVIK 258 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE 320 I L + + L+ G + V+ +++ LLS F+ R+ G++LARY F LLP T E Sbjct: 259 IELYELSQLNYDHGVAGVDGMVKSVSELLSKFVDRFTGSVLARYRGDQFMILLPRITGSE 318 Query: 321 AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGN 380 +E + QL K + + + +D D++ + G+ + G+ E+V+E+ + A + A LQG + Sbjct: 319 SEIVMKQLYKLLTRVGLSTPVDCDELFYTGVAIYHYGEQAEEVLENVDQALKIAVLQGCS 378 Query: 381 SWAIY--DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFD 437 W +Y D+ P +G VRWR L EQ Q+ ++ + +V E+ R+ D Sbjct: 379 GWFLYEQDEQTPVYAKGTVRWRGLFEQTFKNNAFHYEQQLILSMADNKVLGHEIYPRLQD 438 Query: 438 GNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQR 496 N E + + ++PM + G+ + DRL + I L I + ++S + RF R Sbjct: 439 ENNEWIHAGVFLPMAEKCGVLKRIDRLTVEHAISNLETSDPIACGINLDIQSYLDKRFMR 498 Query: 497 WLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTS 556 + +++ + R + E+ E + +++ L + + ALG +AV+ G +V +S Sbjct: 499 AVYLDIIRLPVALRSLLYFEIHEYQINRNLEMLLEPAKNLKALGCCIAVDMVGQDVVDSS 558 Query: 557 WIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQ 616 +IK+LNV+++K+HP LVR++ KR NQL ++S++ +T V A GV S+ EW L + Sbjct: 559 YIKKLNVDVIKIHPSLVRDLHKRQINQLAIRSILGGTVNLATTVVAVGVESKGEWDALNK 618 Query: 617 RGVTGGQGDF 626 GV G QG F Sbjct: 619 LGVYGAQGYF 628 >UniRef50_Q1ZIS7 Putative MSHA biogenesis protein MshH n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZIS7_9GAMM Length = 648 Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 167/641 (26%), Positives = 315/641 (49%), Gaps = 14/641 (2%) Query: 1 MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSN-DFS 59 M+ T KF+ T + I + LLG S + R+ A+ I+ L N D Sbjct: 1 MKFTDKFTLLTTAIVLSCITLILLGGIFSLRSLSLKYHQQRMDAIVNLIEIQLDKNIDHK 60 Query: 60 VLRPQITELMMSADIVRVDLL-HGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMS 118 L + +L+ + ++R+ L H + V N P L PL ++P + Sbjct: 61 ALDAWLPDLLKVSGVIRLQLKDHENVLVDNYYENNIAYP---DRLLLRFKYPLKRYPRLV 117 Query: 119 LRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNG 178 L L P S + AI + +LF +V W+++ G ELLE RA +L Sbjct: 118 LELETIQPYDEVHFSFYPLLGILSAIFLSLSLLFGSVFWIKKHFRGAELLEQRAKYLLQK 177 Query: 179 ERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFF 238 + + EWP S AL L +++ +++Q S D IRS D TGL N F Sbjct: 178 NPTARI-PLAGEWPKYASKALYDLSTQLEESKKQRSHFDAFIRSQVFIDTTTGLANHFAF 236 Query: 239 DNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPG 298 N+L ED + + +++I + + + G ++ + +++LL+ F+ Y Sbjct: 237 INRLEIATEDNSVLSS--ALLIINFKELESVYWSEGETEYHKLLLQISSLLTQFVSPYED 294 Query: 299 ALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQ 358 L R+ + +F ++P + E E ++ +L+K + L LD+D HIG+ + SG Sbjct: 295 NFLGRFSKYEFVLMIPQVSYSETEILSKRLMKRLFLLYLPDCLDKDCFFHIGVSHFNSGD 354 Query: 359 DTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKG--RGNVRWRTLIEQMLSRGGPRLYQ 416 ++E+ E A A Q + W + D S+ + +G++ W +E++ + YQ Sbjct: 355 KPALLIENVERALLVAEHQKASGWFLEDQSILQNSLQKGSIYWGHFLEKVYTEKKVFFYQ 414 Query: 417 KPAVT-REGQVHHRELMCRIF-DGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRY 474 + ++ R+ + H+ +L+ RI D N + + ++ M + G + ++ +++++ LL Sbjct: 415 QQVISARQNKCHYVQLLARICKDDNPLLPPSVFLVMAKKCGFQPQMEKYILTQILGLLTK 474 Query: 475 WPEENLAIQVTVES--LIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPV 532 ++AI +++ + L+ R +W LMQ K+ RK++++E++E + H L+ Sbjct: 475 RGRNSIAIGISISTDILLNRRVFQWFIYELMQLPKALRKKLVLEISEQCMAHHYEDLRKP 534 Query: 533 IRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEA 592 + + +G ++A++Q G ++ST +I + NV+ +K+H L+R+++ R NQ+ +QSLV + Sbjct: 535 LVTLQKIGCKIAIDQVGKVVISTQYIIDFNVDYIKIHQSLIRDVQCRKNNQIALQSLVAS 594 Query: 593 CSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 C + T+V A GV + EW+ L + G+ GQG+F +S+ L Sbjct: 595 CLNSRTKVIALGVDNEYEWKYLRKLGIYAGQGEFLSSASSL 635 >UniRef50_Q12IU8 Diguanylate cyclase/phosphodiesterase n=21 Tax=Shewanella RepID=Q12IU8_SHEDO Length = 657 Score = 253 bits (646), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 168/579 (29%), Positives = 291/579 (50%), Gaps = 19/579 (3%) Query: 65 ITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLRLVYQ 124 + +L+ + V L GDK Y+ NG+ G L H M L LV Sbjct: 88 LPQLLANYHTVEFRLFEGDKLRYSY-NNGANLQQGV-----RYKQALDGHWRMELVLVA- 140 Query: 125 DPMGNYFHSLMTTAPLTGAIGF--IIVMLFLAVRWLQRQLAGQELLETRATRILNGERGS 182 P Y H+L IGF I ++F RW ++L G E L R+ IL+G + Sbjct: 141 -PF--YLHALSWQEYWVLLIGFAAIFALVFYGQRWFAQELDGVEELAMRSHLILDG-KLE 196 Query: 183 NVLGTIYEWPPR-TSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQ 241 L + PR + AL LL ++Q+A+ + R D IRS D +T + N+LFF N+ Sbjct: 197 QALASAGSGKPRLINRALTRLLEQLQDAQRERGRFDKFIRSNVFLDPQTRIGNQLFFVNR 256 Query: 242 LATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALL 301 L L +DQ+ + +HG + +I D ++ G + + L N ++ + + ++ Sbjct: 257 LDGLSQDQQMI-SHGAMYLIDFADLDIAQQEKGDQFIADFLTQLVNSVNQALTEHVDSIF 315 Query: 302 ARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTE 361 +R FA ++P +L EA+S+A +L+K + ++D+ +H+G +R+G + + Sbjct: 316 SRRSFQQFAIVVPQLSLTEADSLANKLLKICISQAGKDFPNQDNFVHLGAAFYRAGDNQQ 375 Query: 362 QVMEHAESATRNAGLQGGNSWAIYDDSL--PEKGRGNVRWRTLIEQMLSRGGPRLYQKPA 419 Q++E A+ A + A LQ N+W +YD E +G+VRWR+ +E L + + Sbjct: 376 QLLEEADMALKAAQLQRSNNWFMYDKGAVDEEIAKGSVRWRSFLESSLLNKRVISFSQGV 435 Query: 420 VTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE 478 + +HH E+ RI D ++V + ++PM + GL + +R + R+ L + Sbjct: 436 FDSDNTLHHHEVFSRIRDNQGKDVRATLFIPMANKCGLMPQIERQLLERVFFTLMPQSQA 495 Query: 479 NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNA 538 N ++ ++++SL F RWL+ TL+ + R+I E++E + +H S+L + ++ Sbjct: 496 NYSVNLSLDSLTSRAFMRWLK-TLLLEHRPLATRLIFEISEDIIVKHQSKLTTHLDMLKK 554 Query: 539 LGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTST 598 +G ++ V+ G +V T +I+E + + +KLH ++R I R+ENQL ++S + Sbjct: 555 MGAKLCVDHVGQQVVGTHYIQECDFDFVKLHKSIIRKIHLRSENQLFIRSFIGGLYRAEV 614 Query: 599 QVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNV 637 QV+A GV S EWQTL GV+ QG+F Q + V Sbjct: 615 QVFAEGVTSFEEWQTLKILGVSAAQGEFLGEVQEANYTV 653 >UniRef50_B8CM59 GGDEF domain protein n=5 Tax=Shewanella RepID=B8CM59_SHEPW Length = 648 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 110/438 (25%), Positives = 203/438 (46%), Gaps = 18/438 (4%) Query: 203 LREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLE-DQEKVGTHGIVMMI 261 + ++ +A E+ SR A QD TG R F +L + + ++ G IV Sbjct: 213 IDKLTDANEKLSRA-------AFQDPITGFGTRAKFTEKLNEICSPNSQQFGVLAIVKAT 265 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA 321 L N L G ++ ++N + +++ P A R +DFA +LP TLK+ Sbjct: 266 ELGSINQLH---GREAGDDYLTRISNHIRKSLVKSPNAYCYRISTADFALILPDVTLKDG 322 Query: 322 ESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNS 381 SI Q+ A D N L D + +IG+C + D +M A++A A G NS Sbjct: 323 TSIIEQVKNAFDEYQQN--LGTDSVAYIGLCPYLQNSDPVSLMTLADTAVSIAQTLGPNS 380 Query: 382 WAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVH-HRELMCRIFD-GN 439 + ++ G+ RW+ I+ ++ R + Y +P V +REL+ R ++ Sbjct: 381 VHVLQRLNGDELFGDSRWKVAIDDIVKRQAIKFYAQPIRPCRNDVESYRELLSRFYNVQG 440 Query: 440 EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN--LAIQVTVESLIRPRFQRW 497 + + + + M + G+SEE DRL I + + +L P + I ++ S + F W Sbjct: 441 KFLPTTTVIAMAERHGMSEELDRLVILKTLSMLNETPSMSGLFGINISASSANQESFVAW 500 Query: 498 LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 L++ L++ ++ R++ E+ E+ + ++S I ++++G RV++ + GL S + Sbjct: 501 LKNVLVR-QRHIAARLVFEVNESGMQTNLSATYHFINEIHSVGARVSIERFGLGFTSFKF 559 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 K++ + +KL + I NQ V+ +++ + +V ATGV ++ E + Sbjct: 560 FKDVRPDFIKLDSSYTQGINSDAHNQFFVKMIIDIARKLTIRVIATGVENQEEKLAMEHL 619 Query: 618 GVTGGQGDFFASSQPLDT 635 + G QG + A PL T Sbjct: 620 LMDGLQGYYIAKPTPLLT 637 >UniRef50_A1U693 Diguanylate cyclase/phosphodiesterase n=3 Tax=Marinobacter RepID=A1U693_MARAV Length = 663 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 112/449 (24%), Positives = 212/449 (47%), Gaps = 15/449 (3%) Query: 194 RTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVG 253 R + A++ + ++ E +L +R +D TGL +R FD ++ +E +EK Sbjct: 223 RVTEAMNQMADDLGQLFEGQGKLIQHLRRVNNEDPVTGLASRSAFDQRMKVEVESEEKSA 282 Query: 254 THGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL 313 G+++M++L F + +G + ++ + + F+ R+ + R ++FA + Sbjct: 283 P-GVLIMLQLAYFADYNLAYGRDEGDQLLRQVAGGIRAFVARHAESFAGRRTGAEFAVFV 341 Query: 314 PHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRN 373 P + + A QL++ +D + ++ D +H G+ R G D +V+ A Sbjct: 342 PGASAADVRIWAEQLVRELDGIYSDLSAPMDAHVHAGLAVARPG-DGIRVLLAAADEALR 400 Query: 374 AGLQGGNSWAIYDDSLPEKG---RGNVR-WRTLIEQMLSRGGPRLYQKPAVTREGQ-VHH 428 A Q G+S ++ LP+ G N+ WRT+I Q + L+ +P V E Q + H Sbjct: 401 AAQQRGDSCSLL---LPDPGVESHHNMETWRTIITQAIREDKLSLWLQPMVHGERQTLVH 457 Query: 429 RELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVES 488 ++ RI + + ++PM + GL + DR+ ++R + L PE LA+ + S Sbjct: 458 YQVFSRIESAEGPLKAGLFVPMAERLGLVSDIDRMLLTRALECLERHPERRLAVSLGSSS 517 Query: 489 LIRPRFQRWLRDTLMQCEKSQRK--RIIIELAEADVGQHISRLQPVIRLVNALGVRVAVN 546 + F+ D L K+ R R+ + +AE + H + +IR ++ LGV V V+ Sbjct: 518 IASDSFRD---DLLTMVAKAGRTAGRLWVGIAEVTIQHHRKAVSSLIRELSRLGVPVLVD 574 Query: 547 QAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVR 606 + G+ V S++K L +++ + N+++ ENQ ++S+V +VYATGV Sbjct: 575 RFGVGGVPFSYLKRLPFRAVRIDHSFIHNLDRHDENQFWLESVVGIAHSRGVKVYATGVE 634 Query: 607 SRSEWQTLIQRGVTGGQGDFFASSQPLDT 635 + +E+ L + G+ G G DT Sbjct: 635 TAAEYSVLCRLGIDGAMGYHLGRPFAADT 663 >UniRef50_UPI000190BF13 regulatory protein CsrD n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. 404ty RepID=UPI000190BF13 Length = 110 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 64/84 (76%), Positives = 73/84 (86%) Query: 1 MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFSV 60 MRLTTKFSAF+TLLTGLTIFVTL+GCSLSFYNA+QYK+ RVQA ATAIDTHLV++D Sbjct: 1 MRLTTKFSAFITLLTGLTIFVTLIGCSLSFYNAVQYKYVSRVQATATAIDTHLVTHDIVS 60 Query: 61 LRPQITELMMSADIVRVDLLHGDK 84 L PQI ELM+++DIVRVDLL G Sbjct: 61 LTPQIDELMIASDIVRVDLLQGSA 84 >UniRef50_Q21MK1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21MK1_SACD2 Length = 642 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 128/540 (23%), Positives = 241/540 (44%), Gaps = 38/540 (7%) Query: 101 SDLFRELSVPLIKHPGMSLR---LVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRW 157 S FR + + HPG + R V+ + + +F + + L G L +++ Sbjct: 124 SGWFRLGELRVQTHPGYAYRDLWRVFTEQLWLFFFTAVLCYGLAG----------LGLKY 173 Query: 158 LQRQLAGQELLETRATRILNGERGSNVLGTIYEWPP--RTSSALDTLLREIQNAREQHSR 215 L R L + LE +A I E V T+ P R A++ ++ +I++ +Q Sbjct: 174 LLRPL---KRLEDQADAICRKE--FPVQETLPNTPELRRMVVAMNRMVSKIKDMFQQQVN 228 Query: 216 LDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGH 275 L +R A+ D TGL NR F+ QL LE G +V+ + + D L+DT G Sbjct: 229 LTEELRREASIDALTGLPNRDEFNAQLKAWLESDHGGGMAALVI-VHVADLQSLNDTHGR 287 Query: 276 SQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTL 335 + + + ++ +P ++LAR DF +P +E ++A L+ + L Sbjct: 288 EKSDGWLQQIAKVIEHCSSAWPSSILARRTGCDFCWFVPSVAERELNALATDLVTRIKLL 347 Query: 336 PNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRG 395 ++ ++GI ++ A++A R + G W + R Sbjct: 348 EFAEV----GKFNVGIAVSAQVDSLPALLGTADAALRQSTSLGDGEWVVMPLGNKTIQRA 403 Query: 396 NVRWRTLIEQMLSRGGPRLYQKPAVTREGQVH-HRELMCRIFDGNEEVSSAEYMPMVLQF 454 WR +E +++ L+ +P V R G+ + E++ RI DG++ +++ + P+V +F Sbjct: 404 AGDWRPFLENVINNQLLSLHAQPIVARSGESPIYAEVLSRIQDGDDLINAGVFWPLVERF 463 Query: 455 GLSEEYDRLQISRLIPLLRYWPEEN------LAIQVTVESLIRPRFQRWLRDTLMQCEKS 508 L DR S L+ L ++ + + + ++ SL F WL ++ + Sbjct: 464 KLEAAMDR---SVLLALTQHLAQSDPQSRRCFGVNLSPMSLFNLEFTEWLEREILASPCA 520 Query: 509 QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKL 568 R++IE+ E + + L ++ + A GVR+A+++ GL + ++ L + +K+ Sbjct: 521 --SRLVIEIPERAL-KRTGGLPEIVFKLAAGGVRIALDRFGLMPAALGSLQNLPLTYVKI 577 Query: 569 HPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFA 628 + I+ +NQ V++LV+ +V A GV + +EW+ L + GV GQG FA Sbjct: 578 DRRFISGIDSHKQNQFYVRNLVQIAQSCDIEVIAEGVETSAEWRVLGELGVGVGQGYLFA 637 >UniRef50_Q0EZM0 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZM0_9PROT Length = 639 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 126/535 (23%), Positives = 234/535 (43%), Gaps = 36/535 (6%) Query: 111 LIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFI--IVMLFLAVRWLQRQLAGQELL 168 L+ HPG + + +++ + S ++ F+ +V + L +R + R L + Sbjct: 127 LVAHPGFAYQKLWETTLQTLLWS---------SLAFMASLVAVLLILRTILRPLNA---V 174 Query: 169 ETRATRILNGERGSNVLGTIYEWPPRTSS------ALDTLLREIQNAREQHSRLDTLIRS 222 E +A I ERG I E PRT A++ + ++Q + + +R Sbjct: 175 EKQAMAIC--ERGF----PIQEHLPRTRELRRVVLAMNKMSAKVQGIINELTTQAEQMRR 228 Query: 223 YAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQF 282 + D TGL NR F+ L ++ D+E+ GT G + +IR+ F + G ++ Sbjct: 229 DSLDDSLTGLANRRAFNAMLENIIHDKEQGGT-GSLAVIRISGFADYNRLHGIQAGDDLL 287 Query: 283 FTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLD 342 + +S Y + AR +DF +LP +A + A++ L N +D Sbjct: 288 IDIAKKISLTANAYHMSTAARITDTDFGVILPLVDSDKAAEFGQSISNAINRLANT--ID 345 Query: 343 RDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTL 402 ++ H GI + ++M A++A A GGN + I S + GN+ W+ L Sbjct: 346 MAELAHTGIALFHETSTMSEIMSDADAALAEASHLGGNGFVI--QSKKSEVPGNIAWKQL 403 Query: 403 IEQMLSRGGPRLYQKPAVTREGQVHHRELMCRI--FDGNEEVSSAEYMPMVLQFGLSEEY 460 IE+ + L +P + QV + EL RI DGN + + M + L+ Sbjct: 404 IEKAMLNNDIHLLAQPVFNLQRQVLYTELRIRIQDQDGNILATPGVFTSMADRLELNTTL 463 Query: 461 DRLQISRLIPLLR--YWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELA 518 D+ I+R L+ + LA+ ++ S+ P F WL + L + ++ E++ Sbjct: 464 DQFVITRATGLIEAGHATTSPLAVNLSPHSINNPSFISWLENHLNHHGDTD-GHLLFEIS 522 Query: 519 EADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEK 578 E + Q I + I L++A +V + G L S +++L V+ +KL R+I Sbjct: 523 EHGLLQQIEQATAFIALIHAHRGKVVMEHFGTRLSSFQTMRQLKVDYIKLSGSYTRDITV 582 Query: 579 RTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 +N+ +Q++ + G ++ A + + ++ +T+ G+ QG +F PL Sbjct: 583 NNDNRFFLQTVADIAHGLDIEIIAEQIETAADAETMQALGINAMQGYYFGEPAPL 637 >UniRef50_A1S6M8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Shewanella amazonensis SB2B RepID=A1S6M8_SHEAM Length = 646 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 107/456 (23%), Positives = 211/456 (46%), Gaps = 21/456 (4%) Query: 192 PPRTSS------ALDTLLREIQNAREQ-----HSRLDTLIRSYAAQDVKTGLNNRLFFDN 240 PP S L T+ E + A +Q H + L R+ A QD TG +R F Sbjct: 182 PPEQSKLGGELKPLATVFEEARQALKQKIDGLHHENEKLSRA-AFQDPITGFGSRARFTR 240 Query: 241 QLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGAL 300 +L L + Q+ + G + M++ + ++ G + ++ + L +P A Sbjct: 241 KLDELAKSQKDL--LGSLAMLQATELGTINQLKGRTAGDDYLAKVAGCLRKAGSPFPDAE 298 Query: 301 LARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDT 360 R SDFA LP+ + +AE L +D + ++ + + G+ ++SG D Sbjct: 299 FYRISSSDFAVFLPNLVISDAERFLEPLKTLLDEYQSTSAME--SIAYTGLVPYKSGVDP 356 Query: 361 EQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV 420 ++ +++A A G NS+ + + ++ G+ RW+ I +++++ R +Q+P Sbjct: 357 VGLLSLSDAALSIAQTLGANSFHVLEKFTEDQEIGDNRWQVAITEIITQRAVRFFQQPIQ 416 Query: 421 TREGQVH-HRELMCRIFDGNEEV-SSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE 478 +V +REL R F+ +V +A + M + GLS+E D+L + + +L P Sbjct: 417 PCRSEVEVYRELFARFFNSEGKVLPTATVIAMAERHGLSQELDKLVVLSAVRMLLDNPNM 476 Query: 479 NLA--IQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLV 536 A + ++ S F WL+D L+ ++ R+++E+ E+ + ++ IR + Sbjct: 477 TGAYGVNISAVSATDDNFVVWLKD-LLTKHRAISNRLVLEINESGLQTNMQGSFRFIREI 535 Query: 537 NALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGT 596 +++G RV++ + G+ S + +E+ + +KL I++ N+ V+ +++ Sbjct: 536 HSVGTRVSIERFGMGFTSFKFFREVRPDYIKLDATYSEAIDQDANNKFFVRMMIDIARRI 595 Query: 597 STQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQP 632 +V A GV + E TL + V G QG + A +P Sbjct: 596 GVRVIACGVERQEEKLTLEKLMVDGLQGFYIAKPEP 631 >UniRef50_Q081P8 Diguanylate cyclase/phosphodiesterase n=2 Tax=Shewanella RepID=Q081P8_SHEFN Length = 632 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 93/415 (22%), Positives = 192/415 (46%), Gaps = 11/415 (2%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A QD +G + R F + + + ++ +G++++I+ + +++ G + ++ Sbjct: 220 AYQDPVSGFSTRQRFTQHIEAISKKDKQ--QYGVLVVIKAAELATINELHGRAAGDDYLA 277 Query: 284 TLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDR 343 L + + + R DFA + TLKE E QL + +D + Sbjct: 278 KLATCIRKSVTNLGLSECFRVSSGDFAVFIESITLKEGERFLEQLKRHLDEYAQST--KS 335 Query: 344 DDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLI 403 D + H G+ + G + +M A++A A G N + + + GN W+ I Sbjct: 336 DSVAHAGMVPYEQGIEPVALMTLADTAVSVAQTLGPNRYYQLEKLSANEQFGNDHWKVTI 395 Query: 404 EQMLSRGGPRLYQKP--AVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEY 460 + +++R + YQ+P + +V+ REL+ R ++ E + + + M ++G+S E Sbjct: 396 DDLINRRSIKFYQQPIQPCNNDTEVY-RELLARFYNSEGEHLPTTTVIAMAERYGMSVEL 454 Query: 461 DRLQISRLIPLLRYWPE--ENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELA 518 D++ +++ I +L P + + ++ S ++ F WL+D L + + R++ EL Sbjct: 455 DKMIVTQTIKVLSENPSISGKMGVNISASSALQDSFTVWLKDILSK-HRGTAARLVFELN 513 Query: 519 EADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEK 578 E+ + ++ + ++ +G +VAV + GL S + +E+ + +KL NIE+ Sbjct: 514 ESGMQANLESSHKFVTEIHKVGAKVAVERFGLGFTSFKFFREVRPDFIKLDSSYSDNIEQ 573 Query: 579 RTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 N+ ++ +V+ S +V ATGV + E L + V G QG + A + L Sbjct: 574 DNNNKFFIRMIVDIAKRISIRVIATGVEKQDEKLVLEKLLVDGLQGYYIAKPEAL 628 >UniRef50_Q2S9M3 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S9M3_HAHCH Length = 666 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 110/445 (24%), Positives = 215/445 (48%), Gaps = 17/445 (3%) Query: 195 TSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLL--EDQEKV 252 +S D L R + EQ + +++L R A D TG+ NR FDN+L L +D + V Sbjct: 222 VNSMADHLRRSFE---EQVATIESL-RKLALLDSVTGVLNRQSFDNRLQAALAGDDGDSV 277 Query: 253 GTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAAL 312 G + + L ++N D +G Q + + ++ + + G+ + R F Sbjct: 278 GALLLAQLSGLSEYN---DQFGREQGDALLKQMAEVIHDECLSHIGSYVGRRGGGCFTVF 334 Query: 313 LPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATR 372 L T AE++A +L++ + +LP K + +HIG+ QV+ A+ A R Sbjct: 335 LSGLTDSRAEAVAERLLERLTSLPLIKNWGGSNRLHIGVVNTEGRTPLAQVLSVADFAMR 394 Query: 373 NAGLQGGNSWAIYDDSLPEKGRGNV---RWRTLIEQMLSRGGPRLYQKPAVTREGQ--VH 427 A N+W S E G+ + W++L+ L+ G L+ +P ++ + + + Sbjct: 395 VAQKSCTNAWRKGRSSGREGGQKPLTATEWQSLLLSTLADKGFYLHFQPVLSDDSRNFLF 454 Query: 428 HRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYD-RLQISRLIPLLRYWPEENLAIQVTV 486 H+ L+ R+ +++AE++PM +F L+ + D ++ L L + + + + V Sbjct: 455 HQALV-RMNMNGRVLAAAEFLPMADRFNLALKVDAQVLEDALTRLAEHHEDAAFCVSLAV 513 Query: 487 ESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVN 546 SL F + +++ +Q R+++E++E + + +++L N L R+ ++ Sbjct: 514 SSLQSAEFADSV-SVILRRFSAQCPRLLLEVSEHALQAAWAGFDRLLQLRNELAFRIVIS 572 Query: 547 QAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVR 606 + G T + ++K V+++K+ PGLV+NI K +Q ++S+V+ + +V GV Sbjct: 573 RFGSTGMPFGYLKSCPVDMIKIDPGLVKNIHKDQGHQFYLRSIVQIAHSQAIKVIGVGVE 632 Query: 607 SRSEWQTLIQRGVTGGQGDFFASSQ 631 S+ +W +L+Q GV G G + Q Sbjct: 633 SQDDWDSLVQLGVDGAMGYYLFRPQ 657 >UniRef50_Q12GR9 Diguanylate cyclase/phosphodiesterase n=2 Tax=Comamonadaceae RepID=Q12GR9_POLSJ Length = 637 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 110/420 (26%), Positives = 192/420 (45%), Gaps = 14/420 (3%) Query: 211 EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLS 270 E+ +RL+ L R D TGL+ R F +QL LL ++ G G+++M+R+ D NML+ Sbjct: 222 EEAARLEAL-RQKVNLDALTGLSGREHFLSQLRELLVGEDS-GAEGVLVMLRVNDLNMLN 279 Query: 271 DTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT--LKEAESIAGQL 328 GH + + L +L M + G R DFA P T + A + +L Sbjct: 280 ARLGHQRADTLLQQLGGVLKDSMREHSGQQAGRLKGGDFALACPGITSPAQAASELHQRL 339 Query: 329 IKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDS 388 +A LP N + + D+ H+ ++ + ++ A+ A A +G NSW + Sbjct: 340 NQA--WLP-NWVAEVPDLFHLAAVPYQRAESIGDLLSRADEALARAEAEGPNSWHASEAD 396 Query: 389 LPEKGRGNVRWRTLIEQMLSRGGPRL--YQKPAVTREGQVHHRELM-CRIFDGNEEVSSA 445 R +WR+L+ + ++ G RL Y+ + +H ++ +I D + + Sbjct: 397 SGSTARPAEQWRSLLTEAVASGKLRLAFYRVVGSGSQNAIHQEGVIRLQIDDTGTLLPAR 456 Query: 446 EYMPMVLQFGLSEEYDRLQISRL-IPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQ 504 ++MPM LS D L++ RL I LR P ++A+ ++ E++ F+ LR L++ Sbjct: 457 DFMPMAAHLNLSAPID-LEVVRLAIAHLRTTP-GDIAVNLSAETIADFSFRYELR-MLLE 513 Query: 505 CEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVE 564 KR++ E+ E V + + + ++ + LG RV + G + +L ++ Sbjct: 514 FHPEICKRLLFEVPEQGVFKQFNAFRDLVLTLKPLGCRVGIEYFGQRFAEGDKLADLGLD 573 Query: 565 LLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 +K+HP VR+I NQ ++ L + V A GV S S+ L G G G Sbjct: 574 YIKVHPSYVRDIAHNPGNQEFLKGLCKVARNFGIVVIALGVESDSDLPLLASLGFDGVTG 633 >UniRef50_A8H535 Diguanylate cyclase/phosphodiesterase n=8 Tax=Shewanella RepID=A8H535_SHEPA Length = 638 Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 102/441 (23%), Positives = 194/441 (43%), Gaps = 13/441 (2%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 L +I + H RL A D TG R F +L + + + K G++M+I Sbjct: 202 LKAKIDGFHKTHERLS----KTAFHDPITGFGTRALFTEKLDEIGKPEHK--GKGVLMVI 255 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA 321 R + ++ G ++ + N + P A R +DFA ++ +K+A Sbjct: 256 RATELASINQMHGREAGDDYLTRIANEIKCAFNEIPQAQFYRISTADFAIVIADIAIKQA 315 Query: 322 ESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNS 381 IA L A + + + + H G+ + D +M A++A A G NS Sbjct: 316 TGIADALKTAFNEY--QQQVGTPAIGHTGLVPYLQDSDPVSLMTLADTAVSIAQTLGPNS 373 Query: 382 WAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPA-VTREGQVHHRELMCRIFDGNE 440 + I + + G RW+ I +L R R Y +P R +REL+ R ++ Sbjct: 374 YHIQEKLTGGELFGESRWKVAINDLLRRKAIRFYIQPIRPCRHNVEFYRELLSRFYNSQG 433 Query: 441 EV-SSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN--LAIQVTVESLIRPRFQRW 497 ++ +A + M + G+SEE D+L + + +L P + + I ++ S F W Sbjct: 434 KLLPTATVIAMAERHGMSEELDKLIVLNTLRMLIQSPNLDGLIGINISAASATNKSFVSW 493 Query: 498 LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 L++ L + ++ R++ E++E+ + ++S I ++++G R+++ + GL S Sbjct: 494 LKNILSR-QRQIAARLVFEVSESGMQANLSATYHFINELHSVGSRISIERFGLGFTSFKL 552 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 KE+ + +KL P + I + N+ V+ +++ +V ATGV + + + Q Sbjct: 553 FKEVRPDYIKLDPSYTQEITQDPHNKFFVKMIIDIARKLGIKVIATGVEKQQDKLAMEQL 612 Query: 618 GVTGGQGDFFASSQPLDTNVK 638 + G QG + + PL K Sbjct: 613 LIDGLQGYYISEPSPLKKEEK 633 >UniRef50_Q31J69 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31J69_THICR Length = 645 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 99/450 (22%), Positives = 207/450 (46%), Gaps = 21/450 (4%) Query: 194 RTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVG 253 R SA++ ++ +++ ++ ++ ++ A QD TGL+NR F+ + LL D++ Sbjct: 207 RVVSAMNAMVHKMKTVFDRDAQHADKLQKLAYQDSVTGLSNRRHFEMNIDALL-DKQAEA 265 Query: 254 THGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL 313 + G + ++R+ L+D +G+ + L + + T + + + AR + S+ ++ Sbjct: 266 SPGAICLVRIHHLKELNDQFGYMTGDNLVKALADKM-THNLNFENSFYARLNGSELLTIM 324 Query: 314 PHRTLKEAESIAGQLIKAV-DTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATR 372 P + K+ ++ KAV L + K + I + + G D Q++ + AT+ Sbjct: 325 PTISGKKLSKPVSEICKAVPKVLKHLKASESKISISVAYLDYLPGNDRSQLLAQLDFATK 384 Query: 373 NAGLQGGNSWAIYDDSLPEKGRG--NVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRE 430 A G N + Y PEK + RW++++ + L+Q+ A ++H+RE Sbjct: 385 EASQLGQNEFFYYQ---PEKAHAEEDTRWKSMLNNAIEDKRFILFQQAAYDENRKIHNRE 441 Query: 431 LMCRIFDGNEEVSSAEY-MPMVLQFGLSEEYDRLQISRLIPLL---RYWPEENLAIQVTV 486 + R+ D N + SA + +P + + +E D+L +S + L R + E LAI + Sbjct: 442 ALLRLKDENNAIHSASFFIPAIRKLNKMDEIDKLAVSLAVTYLSNHRLFHGERLAINLG- 500 Query: 487 ESLIRPR-FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISR--LQPVIRLVNALGVRV 543 + +IR + Q WL L + +Q + H +R +P+I + G+ Sbjct: 501 QCVIRDQTLQDWLFQQLETVDTNQIAI-----EIPEAIIHANRNEARPLIEKIKNAGIHF 555 Query: 544 AVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYAT 603 ++ G + ++I+E + +KL + IE+ + + V S+ + Q+ A Sbjct: 556 GLDNFGNRFTNMNYIQEFRPDYIKLDTSFSKAIEEDDQTRYYVSSVCDMSESLDIQIIAM 615 Query: 604 GVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 + + ++ Q + G+ QG +F + +PL Sbjct: 616 SIETETQLQAFKELGIHHFQGYYFGAPKPL 645 >UniRef50_B3PD33 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PD33_CELJU Length = 633 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 112/435 (25%), Positives = 192/435 (44%), Gaps = 14/435 (3%) Query: 194 RTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVG 253 R A++TL ++ E+ ++ ++R + D TG+ NR F N L T L+ + +G Sbjct: 205 RLVRAMNTLSASVKIMLEKEAQQLNILRRESQLDPLTGIYNREHFLNVLDTRLQTDDGLG 264 Query: 254 THGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL 313 G++ + R+ + N L+ G Q +E + +L+ F +P + L R + SDFA LL Sbjct: 265 -QGVIALARVRELNELNTHLGRQQTDELLCQIAAVLTQFATEFPESALGRLNGSDFALLL 323 Query: 314 PHRTLKEAESIAGQLIKAVD----TLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAES 369 P +A IA +L + ++ L ++ + + IC ++ GQ +++ + Sbjct: 324 PSELASDA--IATELAQKLNFELIALGQEQL-----ALPLAICQYQHGQKRGHLLQQLDG 376 Query: 370 ATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHR 429 A A L+G N + D+ + RWR LI+ L L Q P ++GQ+ H Sbjct: 377 ALAKAELKG-NRAMVLSDTGEQSPPSLDRWRELIQNALHNRRFTLGQYPVQRQDGQLLHM 435 Query: 430 ELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESL 489 + R+ E + ++ + GL D + + L+ P LAI ++ ESL Sbjct: 436 DAPLRLQLDGELKPAGFFIAWASRLGLLPAIDLAALQAGLQQLQQTPSVPLAINISAESL 495 Query: 490 IRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAG 549 RF R L+ K K + ++ E +H+ L+ + ALG + AG Sbjct: 496 CNARF-REQALQLIHASKPLAKLLWLDFPEVCALRHMDELKAFCTQLKALGCLPGLEHAG 554 Query: 550 LTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRS 609 L +++L + LK+ LVR+I K NQ +QSL + A GV Sbjct: 555 LEFTQFQQLQDLGLSHLKIDAALVRDIHKTPANQPFLQSLCRIGHSLGIVMIAEGVNQVE 614 Query: 610 EWQTLIQRGVTGGQG 624 E Q L + G+ G Sbjct: 615 EQQQLEKLGLDAITG 629 >UniRef50_B7RZX6 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZX6_9GAMM Length = 639 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 104/434 (23%), Positives = 196/434 (45%), Gaps = 14/434 (3%) Query: 197 SALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHG 256 SA++ + I++ Q ++ + A D TGLNNR F + LE + V G Sbjct: 207 SAMNEMSARIKHVLGQEAKRLQKWQREAHVDKVTGLNNREPFMKSVDAALES-DDVNATG 265 Query: 257 IVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR 316 + ++R+ ++ +G + ++ + N L+ +M + R + SDFA L P R Sbjct: 266 SLTLLRITGLARMNQLFGRAAMDGVLSEVGNELNRIVMSHSRWAACRLNGSDFAILAP-R 324 Query: 317 TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGL 376 + E+ A Q+ + + + +D ++ + G +M + A Sbjct: 325 AMDPNEA-AQQMQDGIRQVLEARSMDEGVLLPAATTIYAHGDTIGSIMTRLDGALLANER 383 Query: 377 QGGNSWAIY---DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMC 433 +G +S ++ D + + WR ++EQ L L P V E ++ H E M Sbjct: 384 EGESSISVAFEGDIQMQPVRQQMEEWREILEQSLRDQNFLLDYFPLVGLENELIHYEAMV 443 Query: 434 RIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQIS---RLIPLLRYWPEENLAIQVTVESLI 490 R+ E++S+ +++P V + +S E D+ + R I Y AI ++V +++ Sbjct: 444 RLKWQGEKLSAGQFLPWVNRLEISSELDKHVVDLALRSIETTGY----PTAINLSVAAVV 499 Query: 491 RPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGL 550 P F W+ + + + K + IE+ EA +HI + + + V A G ++ + G Sbjct: 500 EPGFVSWIGERFT-AKSAAAKNLWIEIPEAMAFRHIQNFKSLCKRVKASGCKIGIEHVGH 558 Query: 551 TLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSE 610 L + ++ ++ LK+ VR+IE + NQ L+++L +VYA GVR+ E Sbjct: 559 QLSDLGNLSDVGLDYLKIDASFVRDIENNSANQTLLRTLCTVGHSIGVKVYAEGVRTEQE 618 Query: 611 WQTLIQRGVTGGQG 624 WQT+++ G G G Sbjct: 619 WQTMLEIGADGATG 632 >UniRef50_A3QEN3 Diguanylate cyclase/phosphodiesterase n=4 Tax=Shewanella RepID=A3QEN3_SHELP Length = 642 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 104/438 (23%), Positives = 193/438 (44%), Gaps = 29/438 (6%) Query: 213 HSRLDTL------IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTH--GIVMMIRLP 264 H + D L + A QD T R F +L L K G G++ MI+ Sbjct: 203 HDKFDQLQQQTEQLNREAYQDPVTLFGTRPKFTEKLDAL----AKPGKSRIGLMAMIKAT 258 Query: 265 DFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESI 324 + ++ + G + ++ + + + P R +DFA +P LK+A+ Sbjct: 259 ELGHVNQSQGRAAGDDYLAGVATCIRKALQGMPNIEAFRISSADFAVFIPDLVLKDAQQP 318 Query: 325 AGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAI 384 +L D D + + +IG+ + G D ++ A++A A G NS+ + Sbjct: 319 LEKLKAQFDEYQQGS--DLESVAYIGMVPYEQGGDALSLVYIADAAVSIAQTLGPNSYHV 376 Query: 385 YDDSLPEKGRGNVRWRTLIEQMLSRGGPRLY-QKPAVTREGQVHHRELMCRIFDGNEEVS 443 + E+ G+ W+ IE ++ R + + Q R +REL+ R + S Sbjct: 377 QEKLSDEELVGDSHWKLAIEDIIKRRAIKFHAQDIQPCRGADNVYRELLSRFYS-----S 431 Query: 444 SAEYMP------MVLQFGLSEEYDRLQISRLIPLLRYWPEEN--LAIQVTVESLIRPRFQ 495 +++P M + GLS E D++ I + LL P L I ++ S+ +P F Sbjct: 432 EGKFLPTGTVIAMAERHGLSVELDKIIILSTLRLLLDTPTFTGALGINISTASVNQPAFT 491 Query: 496 RWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVST 555 WL+D ++ ++ R+++E+ EA + +I + +R ++++G RVAV G+ S Sbjct: 492 AWLKDIFVR-QRQIASRLVLEVNEAGMQANIRQAHKFVRDMHSVGARVAVEHFGMGFTSF 550 Query: 556 SWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLI 615 + KE+ + +KL + I+ + N+ V+ +V+ S +V A+ + + E L Sbjct: 551 KFFKEVRPDFIKLDGSYSQGIDTDSNNRFFVKMIVDVARKQSVKVIASSIERQEEKFALE 610 Query: 616 QRGVTGGQGDFFASSQPL 633 Q V G QG + A +P Sbjct: 611 QLLVDGLQGFYIAKPKPF 628 >UniRef50_B8GU61 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=2 Tax=Thioalkalivibrio RepID=B8GU61_THISH Length = 1076 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 104/417 (24%), Positives = 188/417 (45%), Gaps = 26/417 (6%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A D TGL NR F L ++ ++ + ++ L +F ++DT+GH + Sbjct: 655 AQHDALTGLYNRHRFQEHLDRMISSAQRNDSRFALLYFDLDEFKYINDTFGHRAGDTVLV 714 Query: 284 TLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLP-----NN 338 +S+ + G + AR +FA L R E +A ++ +A+ +P +N Sbjct: 715 RAAGEVSSLVRS--GEVFARLGGDEFAVLAEIRHDDEPSQLAERIARAISAIPFRFRGSN 772 Query: 339 KMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNV 397 L IGI + G + E ++ HA++A A G N+W++YD S Sbjct: 773 LRL----TASIGIAFFPEHGDNVEDLVAHADTAMYQAKSNGKNTWSLYDPSRNHSKAMMA 828 Query: 398 R--WRTLIEQMLSRGGPRL-YQKPAVTREGQVHHRELMCRI---FDGNEEVSSAEYMPMV 451 R WR I+Q L L +Q T +G++ H E + R+ DG + +++P+ Sbjct: 829 RMTWRGRIDQALREESLELHFQGIYSTADGELSHVETLVRMRDPADGERLIMPGQFIPVA 888 Query: 452 LQFGLSEEYDRLQISRLIPLLRYWPE-ENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQR 510 + G E DR + + I LL P+ LA+ ++ S P ++++D L+Q + Sbjct: 889 EKTGQILEIDRWVLRQSIGLLAKHPKLRALAVNISGRSFDEPGLPQYIQD-LLQRHDVEP 947 Query: 511 KRIIIELAEADVGQHISRLQPVIRLVNAL---GVRVAVNQAGLTLVSTSWIKELNVELLK 567 +R+I+EL E +S +Q R + AL G + ++ G + +++K L V++LK Sbjct: 948 RRLIVELTETAA---VSEMQDAQRFIEALHQTGCLIGLDDFGSGFSTFAYLKYLGVQILK 1004 Query: 568 LHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 + +R++ +NQ V+++++ G A V L + GV QG Sbjct: 1005 IDGMFIRDLPNNRDNQAFVKAMIDVAKGLDKLTVAEFVEDAETLAMLREFGVDMAQG 1061 >UniRef50_Q15WY3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15WY3_PSEA6 Length = 663 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 133/553 (24%), Positives = 239/553 (43%), Gaps = 59/553 (10%) Query: 114 HPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWL-----QRQLAGQELL 168 HPG + ++Q+ + +++ M A GA+ + V++ + L Q ++ Sbjct: 138 HPGFGYQQLWQNAVQSFW---MILAVFIGALVLLYVLVKMITTPLLALVKQADAISKQQF 194 Query: 169 ETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDV 228 E AT E VL R S+ L L ++ + E++ R +A QD Sbjct: 195 EQIATIPRTPELKRIVLAV-----NRMSAQLAKLFTQLSSQAERY-------RDFAYQDT 242 Query: 229 KTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTN- 287 TG+ NR F+ LL D E+ + G +++IRL N ++ + G+ Q +++ TL + Sbjct: 243 LTGVANRRAFELAFEQLLADSEQ-HSQGYLLLIRLTSLNEVNSSLGY-QAGDEYVTLVSQ 300 Query: 288 -LLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDM 346 L + + L R +DF LL + S A +I ++ + ++ R Sbjct: 301 ELQNALAQQDLNGTLFRVSGADFVMLLEDIAQQPTVSFAQSVISQLNAIEKSEY--RLGT 358 Query: 347 IHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQM 406 H+G+ ++ G V+E A++A A + + W + + N WR + + Sbjct: 359 AHVGVGSFSFGDTRTDVLERADNALSGASV-STDRWQLAQQE--DVHHSNCEWRAQLNTI 415 Query: 407 LSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN----EEVSSAE------------YMPM 450 L + +P T++G+ + E R G + S+E Y+PM Sbjct: 416 LQQNHADFVAQPIQTKQGETLYAEWFARFSSGTAASANKADSSEHNKTDSDNKAHGYLPM 475 Query: 451 ------VLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVE--SLIRPRFQRWLRDTL 502 ++ +++ D L I+ + L P + AI + V SL + F +WL L Sbjct: 476 GQLVPASVRLNYAQKLDELLIASALAQL---PSQQHAIGLNVSRLSLSQTSFHQWLISAL 532 Query: 503 MQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELN 562 Q + + ++++E+ E + L I+ + + GVR+ V + G L + + ++++ Sbjct: 533 PQ-DSAACAKLVLEIPERALVNGTQDLMRFIQQLKSRGVRITVERFGAQLAAITHLRKIR 591 Query: 563 VELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGG 622 + LKL VRNI +NQL VQSLV G + QV A V S +E + L V Sbjct: 592 PDYLKLDGRYVRNIHNEPDNQLFVQSLVNIAHGLNIQVIAEMVESEAEAKCLTDLFVDHL 651 Query: 623 QGDFFASSQPLDT 635 QG + P+DT Sbjct: 652 QGYYIG--MPVDT 662 >UniRef50_Q482U2 GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q482U2_COLP3 Length = 634 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 119/515 (23%), Positives = 225/515 (43%), Gaps = 48/515 (9%) Query: 137 TAPLTGAIGFIIVMLFLAVRW-----------LQRQLAGQELLETRATRILNGERGSNVL 185 T G I I+ +F++ R + +Q+ G EL + + E+ + L Sbjct: 132 TQLFIGVIALSIIFVFISARLNYKLQLTIFSVISKQI-GNELAKINNADFITKEQDNQQL 190 Query: 186 GTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNR----LFFDNQ 241 E P AL+ + EI+ + T + A D TG+ NR F++N+ Sbjct: 191 ---LEIP-----ALEEGIAEIKTMMTEQFNNTTNLEIEAHVDSLTGIENRNRFVQFYENE 242 Query: 242 LATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALL 301 + + G++++ R + ++ G+S + + ++ T ++ P + Sbjct: 243 IVN-----DSPVNFGVLLITRCSELQTINQIHGYSSGDNYIVRVAEIIKTALISRPTGKI 297 Query: 302 ARYHRSDFAALLPHRTLKEAESIAGQL-IKAVDTLPNNKMLDRDDMIHIGICAWRSGQDT 360 R + SDFA +LP+ LK AE A +L IK D N++ D + G+ + + Sbjct: 298 FRLNSSDFATILPNVKLKLAEDYASELTIKFNDYQQVNEL---DSVAFTGLVYFDKSKPL 354 Query: 361 EQVMEHAESATRNAGLQGGNSW------AIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRL 414 +++ A++ A Q NSW I +DS GN WR I+ +L G L Sbjct: 355 GELLALADTGVSVAQTQKVNSWYSQKDIDILNDS--SANYGNQNWRQEIDSVLGAGRISL 412 Query: 415 YQKP--AVTREGQVHHRELMCRIFDGNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPL 471 +P R +V+ E++ R + N + +A ++ M + + DRL I I Sbjct: 413 LLQPIQPSGRNTRVYG-EILARFLNANNNMLPTATFIAMAEKLDKITDVDRLIIDTAIKE 471 Query: 472 L--RYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRL 529 + + + + I ++ S+ F WL L++ E S R++ E++E + Q+I Sbjct: 472 ITSKNMLDSSYGINISPRSINNEHFMIWLERKLLR-EPSAASRLVFEISELGLQQNIKTA 530 Query: 530 QPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSL 589 + ++ +++ +G RV V + G+ L S + ++L + +K+ R+I+ NQ ++ + Sbjct: 531 KRLVDMLHRVGSRVTVERFGVGLTSFKFFRDLTPDYIKMDSSYTRDIDDDKNNQYFLRLM 590 Query: 590 VEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 V+ V A V S+ E TL + + G QG Sbjct: 591 VDLAHRLGISVLAESVESQEEKHTLEKLFIDGCQG 625 >UniRef50_UPI000169AB40 putative diguanylate cyclase/cyclic diguanylate phosphodiesterase protein n=1 Tax=Yersinia pestis FV-1 RepID=UPI000169AB40 Length = 126 Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 54/99 (54%), Positives = 70/99 (70%) Query: 428 HRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVE 487 HRE + + +AE+MP+V +GL E YDR +I ++IPLL WP+E LA ++V+ Sbjct: 4 HREKLAAYMMVPPGLLAAEFMPLVQPYGLGERYDRQKIDKIIPLLSLWPDETLAFSISVD 63 Query: 488 SLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHI 526 SL+ FQRWLRDTL+QC+KS R RII ELAEADV QHI Sbjct: 64 SLLHRPFQRWLRDTLLQCKKSDRMRIIFELAEADVCQHI 102 >UniRef50_Q47K14 Diguanylate cyclase/phosphodiesterase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47K14_DECAR Length = 783 Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 111/415 (26%), Positives = 187/415 (45%), Gaps = 13/415 (3%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTH-GIVMMIRLPDFNMLSDTWGHSQVEEQF 282 A +D TGL NR F +L L+ ++ T G V+ + +F ++DT+GH +V + Sbjct: 363 AERDPLTGLANRARFAAELDRLVSRFQRDATQSGAVLYFDIDEFKTINDTFGH-RVGDNV 421 Query: 283 FTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLD 342 T + + ++R G LLAR +FA + P L +++A +++KA+ L Sbjct: 422 LVRTADVVSKLVR-TGELLARLGGDEFAIVAPGADLDGVQAMAERVVKALTGLSFEFDGK 480 Query: 343 RDDM-IHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGR--GNVR 398 R + I +GI E+++ HA++A A G N W IY L E + Sbjct: 481 RFGLTISLGIALLPEHAASAEELVAHADAAMYQAKRSGKNCWRIYRPDLDESSHMLSQLG 540 Query: 399 WRTLIEQMLSRGGPRL-YQKPAVTREGQVHHRELMCRIFDGN---EEVSSAEYMPMVLQF 454 W I+ L+ L +Q VT + H E + R+ D + E + ++P + Sbjct: 541 WNDKIQAALNENRLVLHFQGVHVTATRAISHYEALVRMIDPDNPDELLQPGSFIPAAERT 600 Query: 455 GLSEEYDRLQISRLIPLLRYWPE-ENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRI 513 G + DR I I L P LAI V+ S P R + D L + + +R+ Sbjct: 601 GRIVDIDRWVIGTAIHKLAGMPSLPALAINVSARSFDDPTLARTISDLLTEFHVNP-QRL 659 Query: 514 IIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLV 573 IIEL E +I + I + LG V ++ G+ S +++K L+ ++LK+ + Sbjct: 660 IIELTETAALANIRDSERFIDDLRRLGCTVCLDDFGVGFSSFAYLKHLSADVLKIDGMFI 719 Query: 574 RNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFA 628 RN+ E+Q+ V+++VE G + A V L + GV QG + + Sbjct: 720 RNLVSNREDQVFVRAIVEVARGLGKKTVAEFVGDAPTLALLGELGVDYAQGYYLS 774 >UniRef50_A6W234 Diguanylate cyclase/phosphodiesterase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W234_MARMS Length = 655 Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 100/425 (23%), Positives = 198/425 (46%), Gaps = 25/425 (5%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQ--------EKVGTH----GIVMMIRLPDFNMLSD 271 A D TGL NRLF N + ++ D E+ +H G + +I L F ++D Sbjct: 216 ATHDSLTGLPNRLFLANMMHPIIIDHSDPTHKKYEEFYSHYPKQGCLFVIDLDKFKEVND 275 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKA 331 T+GH+ + + L + L R+ F P +++A+++ +LI Sbjct: 276 TFGHAAGDTLLINVAKKLGQVL--DDAQTLVRFGGDKFIIWAPEVDIEQAKNLVQRLIIT 333 Query: 332 VDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLP 390 + L IG+ + S D E ++ +A++A A Q + W+++ + Sbjct: 334 CNEPVMINKLAISTGASIGLSHYPSQATDPESLILYADTAMYEAK-QNRSGWSMFSERNI 392 Query: 391 EKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNEEV-SSAEYM 448 + GR ++ R ++ LS +L+ +P V+ ++G + E + R + + + A ++ Sbjct: 393 QCGRQRLKLRADLDDALSERQIKLHYQPKVSLKDGHIIGVEALARWYHPTDGLLPPAHFI 452 Query: 449 PMVLQFGLSEEYDRLQISRLIPLLRYWPEENL----AIQVTVESLIRPRFQRW-LRDTLM 503 ++ Q G +E+ R I+ I L W ++ L AI ++ +L+ P + LR L+ Sbjct: 453 ELIEQSGRVQEFGRYVITNAIEQLDLWHQQGLFTHIAINLSPYNLLDPSLLDFTLR--LL 510 Query: 504 QCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNV 563 + K + ++ IEL E+ +I + + G+++A++ G + S S+I LNV Sbjct: 511 KNHKIEANKLEIELIESATSVNIEYISQSLNNFKEAGIKLAIDDFGTGMSSLSYISNLNV 570 Query: 564 ELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQ 623 +K+ + +E+ Q +V S+V + +V A G+ ++S+ + LI+ G GQ Sbjct: 571 NHIKIDRSFIDGVEQDIRKQAVVSSVVMLANSFECEVIAEGIENKSQSEMLIEIGCLYGQ 630 Query: 624 GDFFA 628 G ++A Sbjct: 631 GYYYA 635 >UniRef50_Q47AP8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AP8_DECAR Length = 637 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 97/420 (23%), Positives = 184/420 (43%), Gaps = 16/420 (3%) Query: 211 EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLS 270 E+ +RL+ +R A D TGL NR FF N+LA L D + + G ++M+RL D ++ Sbjct: 222 EEAARLEQ-VRREATLDSLTGLANRDFFMNELAAALSDDDASAS-GTLLMLRLGDLTGIN 279 Query: 271 DTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIK 330 G +E + L+ P A AR + +DFA LLP +++ A +L+ Sbjct: 280 RRAGRETADEVLRRIGATLNALAADKPNAAAARLNGADFALLLP--GVRDPALQAEKLLH 337 Query: 331 AVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLP 390 + L +++ + + ++ A+ GQ ++ ++A +A Q G +W + + Sbjct: 338 TLSDLAAAGLIEGERIGYVASGAYLHGQTVGSLLSRIDAALASAETQSGLAWCRAESNSE 397 Query: 391 EKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRI--FDGNEEVSSAEYM 448 ++ N W+ L++ + RL + P GQ+ H E R+ + E +++ +M Sbjct: 398 QQATSNADWKKLLDGAIETQRLRLIEFPVAGSGGQLLHLECPLRLQATEDGEWLAAGAFM 457 Query: 449 PMVLQFGLSEEYD----RLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQ 504 PM + ++ E D RL + R+ L +A+ ++ ES++ F+ L + Sbjct: 458 PMASRLSMTTELDLTVVRLALDRIAAGL-----PAVAVNLSGESILDASFRARLYAQI-A 511 Query: 505 CEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVE 564 + R+ +E++E QH + LG R+ + G + + ++ Sbjct: 512 ARRDLAPRLWMEVSEIGAFQHFEEFHAFCDALRPLGCRLGIEHFGRQFSEIGRLHRIGLD 571 Query: 565 LLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 LK+ +R I+ + NQ ++ L V A V++ E L + G G G Sbjct: 572 YLKVDGSFIRAIDSQPGNQAFLKGLCSIAHNIGLTVIAESVQTAEELAILPELGFDGATG 631 >UniRef50_B1Y236 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y236_LEPCP Length = 729 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 115/461 (24%), Positives = 205/461 (44%), Gaps = 44/461 (9%) Query: 203 LREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIR 262 L +I R +RL+ L A D TGL NR +NQL L+ ++ +M + Sbjct: 284 LNDISEQRRVEARLEHL----ALSDAVTGLPNRSALENQLLRQLDREQAFA----LMYLD 335 Query: 263 LPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL-PHRTLKEA 321 + ++D++GH ++ L + L T + G ++R+ +F +L P E Sbjct: 336 VEGVKEVNDSFGHDAGDDLLRQLADRLRTIL--PAGTFISRWGGDEFVLVLAPGSGETEV 393 Query: 322 ESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAW---RSGQDTEQVMEHAESATRNAGLQG 378 S A +I A+ P K+ + + I A R G+++ ++ A+SA + A L+G Sbjct: 394 RSCAQTMIAALS--PPMKVFLNEISVAPSIGAVLVPRDGRESGLLLRKADSAMQAAKLRG 451 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG 438 +S A YD SL + VR + R G +P V REG EL+ R Sbjct: 452 RDSLAFYDGSLDTDSQRRVRMHNQLRLDAERNGFTFVAQPKVDREGHAVGAELLMRWPTA 511 Query: 439 N-EEVSSAEYMPMVLQFGLSEEYDR-------------LQISRLIPLLRYWPEENLAIQV 484 VS E++PM + GL R LQ+ + +P+ A+ + Sbjct: 512 AFGMVSPGEFIPMAEKIGLIGLMGRHALHAAAQLAARSLQVHQPLPV---------AVNL 562 Query: 485 TVESLIRPRFQRWLRDTLMQCEKS--QRKRIIIELAEADVGQHISRLQPVIRLVNALGVR 542 + + L++ R L L+ CE++ + +EL E+ + +++ ++P+++ + G Sbjct: 563 SPKQLLQRGLDRQL---LLACERAGVAPAMLELELTESALVDNMTIIEPLLQRLRQHGFS 619 Query: 543 VAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYA 602 +A++ G S S+++ L +K+ V +I+ L+ +V+ C A Sbjct: 620 LALDDFGTGFSSLSYLRHLPFNKIKIDRSFVMDIDHDHRAARLLAHMVKLCGALGMSTVA 679 Query: 603 TGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 GV S S+++ L+ GV QG +FA P+D V + S R Sbjct: 680 EGVESESQFKALLDLGVQEFQGYYFARPLPVDEWVARLSAR 720 >UniRef50_Q3IKD7 Putative membrane protein n=3 Tax=Alteromonadales RepID=Q3IKD7_PSEHT Length = 647 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 96/413 (23%), Positives = 186/413 (45%), Gaps = 15/413 (3%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 I+ A +D T L NR F +E+ EK T G + +IR + ++ T G+ + + Sbjct: 230 IKHQAYKDGVTDLGNRNMFVEYYEKNIENSEK-STFGTLALIRCSELQSINQTRGYQKGD 288 Query: 280 EQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNK 339 E + +++ Y G+ + R + SDF A+LP+ LKEAE L + Sbjct: 289 EYIKGVADIIKHISGTYTGSQVFRLNSSDFVAVLPNIPLKEAERFGENLQSRFTQYQQTQ 348 Query: 340 MLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDS----LPEKGRG 395 L + + GI + + +++ ++A A + N+W + +S G G Sbjct: 349 ELS--SVANTGIVGYEKAKPLGELLSVVDNAMSMAQSKHANAWHVQRESDLINNVSAGFG 406 Query: 396 NVRWRTLIEQMLSRGGPRLYQKPAVTREGQVH-HRELMCRI-FDGNEEVSSAEYMPMVLQ 453 N WR +I +++ L + + + + E+ R + N+ + +A ++ M + Sbjct: 407 NQNWRKVINEVIEAKRVHLVMQNIMPLGKNIKAYAEIQVRFKTEDNQMLPTASFLAMAEK 466 Query: 454 FGLSEEYDRLQISRLIPLL--RYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRK 511 ++ E DRL I + + R E+ + VT S +F WL L++ + Sbjct: 467 LDMAIEIDRLIIDSSLEKIKSRNLSEKFFGLNVTPSSAHNDQFVIWLERRLLK-DTHIAS 525 Query: 512 RIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPG 571 +++ E++E + Q+I + I +++ +G R+ V + G+ L S + ++L + +K+ Sbjct: 526 KLVFEVSEFGLQQNIKASKRFIDMIHRVGARITVERFGVGLTSFKFFRDLKPDFIKMDAS 585 Query: 572 LVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSE---WQTLIQRGVTG 621 R +E NQ ++ +V+ V+A GV S+ E +TL GV G Sbjct: 586 YTRGLEDDKNNQYFMRLMVDLAHRIGVSVFAEGVESQEEKHIIETLCLDGVQG 638 >UniRef50_B8GN37 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GN37_THISH Length = 803 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 104/413 (25%), Positives = 186/413 (45%), Gaps = 18/413 (4%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A D TGL NR F+ +L + ++ ++ L +F ++D++GH + Sbjct: 382 AEHDALTGLCNRHCFEQRLEKAMASAQRHHHRLALLYFDLDEFKAINDSFGHRAGDAVLV 441 Query: 284 TLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNN-KMLD 342 + + L+ + G +LAR +FA L +++EA S+A +L V +P + Sbjct: 442 RVASELAPVVR--GGDMLARVGGDEFALLTQIDSIEEARSLAARLCGTVAKIPFRFRGTG 499 Query: 343 RDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGN----- 396 +GI + G+ TE ++ A+ A A G N+W++YD PE+ R Sbjct: 500 VRSTASVGIAVYPEHGETTEDLVARADIAMYQAKGLGKNTWSVYD---PERDRSEAVAER 556 Query: 397 VRWRTLIEQMLSRGGPRL-YQKPAVTREGQVHHRELMCRIFDGNEE---VSSAEYMPMVL 452 + W I L + L YQ G++ H E + RI D + + +++P+ Sbjct: 557 LSWGDRIRMALEQDLLLLHYQGVYDAASGELVHMEALARIRDPRDLERILMPGQFVPIAE 616 Query: 453 QFGLSEEYDRLQISRLIPLLRYWPE-ENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRK 511 + GL DR + I L P+ LA+ ++ S P +R+ L+ + Sbjct: 617 KTGLILALDRRVLELGIAQLADNPDMPPLAVNISGRSFDDPALADAIRE-LIARHRVDPS 675 Query: 512 RIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPG 571 R+IIEL E I Q I ++ LG +V ++ G S +++K ++V++LK+ Sbjct: 676 RLIIELTETAAVSEIQEAQRFIESMHRLGCKVCLDDFGAGFSSFAYLKYIDVDMLKIDGM 735 Query: 572 LVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 VR++ + ENQ+ V+++V+ G + A V + + L GV QG Sbjct: 736 FVRDLTRDRENQVFVRAMVDVAKGLGKRTVAEFVEDAATLEMLNTLGVDMAQG 788 >UniRef50_B0TEB0 Pas sensor diguanylate cyclase/phophodiesterase n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TEB0_HELMI Length = 576 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 110/460 (23%), Positives = 202/460 (43%), Gaps = 45/460 (9%) Query: 204 REIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRL 263 R++ +E L L A D TG+ NR +FD L+ K GT +++I + Sbjct: 128 RDLSEQKETEKHLKHL----ATHDYLTGIPNRYYFDGALSRA-RRLAKEGTVSSLLLIDV 182 Query: 264 PDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAES 323 FN+++D H + L+ LL + + R +LAR +F LL EAE Sbjct: 183 DKFNLVNDLLDHDMGDRLLTNLSRLLKSQIRR--DDVLARLSGDEFGLLLHGMAEAEAEK 240 Query: 324 IA---GQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGN 380 +A ++K D P + D + IG+ QD QV+ A +A A + G + Sbjct: 241 VALNLCHIVKERDLCPVLEGCDLRFTVSIGVAEINGHQDVRQVLSRAGAALHMAKMAGRS 300 Query: 381 SWAIYDDSLPEKGRGNVRWRTLIEQ-----MLSRGGPR-----LYQKPAV-TREGQVHHR 429 + N R + +E+ + RG R L+ P V + +G V H Sbjct: 301 QVVV--------AYANERMFSRLEETSRLIQIVRGADREGRFQLFFMPVVRSSDGAVEHY 352 Query: 430 ELMCRIFDGNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVES 488 E + R+ DG+ + + A ++P+ FGL + +R ++ + L P+ L + ++ ES Sbjct: 353 EALLRLRDGDGKLIPPATFIPVAESFGLMGDIERWVVAEAVRFLVKNPQLRLYVNLSGES 412 Query: 489 LIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQA 548 L ++ + ++Q + R+ E+ E + + + ++ + +LG R A++ Sbjct: 413 LGDKEILNFIEE-IVQTTPAIHGRLGFEITETAAVRDLMSAEQWVQKLRSLGCRFALDDF 471 Query: 549 GLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSR 608 G S +++ +L V+ +K+ VR+I+ E LV+ G + V++ G R+ Sbjct: 472 GSGYSSFAYLNKLPVDFIKIDGSFVRSIDHDPERHALVK-------GINQLVHSLGKRTI 524 Query: 609 SE-------WQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 SE W+ + + G+ GQG + PL ++ S Sbjct: 525 SEYVENDRIWRLIREMGIEYGQGYYLGEPSPLPQDMASES 564 >UniRef50_C3X6Z6 Predicted protein n=2 Tax=Oxalobacter formigenes RepID=C3X6Z6_OXAFO Length = 663 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 120/548 (21%), Positives = 241/548 (43%), Gaps = 36/548 (6%) Query: 108 SVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQEL 167 SV + HP + ++ + +++ L+ A L G + ++ + ++ +Q+Q Sbjct: 131 SVKVSAHPEFAYIRLWSTCVQSFYLFLIGFAVLFGLVMIVLHYVLRPLKAVQKQ------ 184 Query: 168 LETRATRILNGERGSNVLGTIYEWPPR---TSSALDTLLREIQNAREQHSRLDTLIRSYA 224 A I N E V+ W +A++ + +I+ Q IR+ A Sbjct: 185 ----AEAISNKEY---VIQAQIPWTRELRDVVTAMNLMSSKIKELFNQQEETLERIRNEA 237 Query: 225 AQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFT 284 D TGL NR +F +L ++E + G + I + ++ GH + + Sbjct: 238 YTDTTTGLPNRTYFTMRLQQMIESGSRFEL-GALFFIEISHLAEINKKSGHMAGDTLLKS 296 Query: 285 LTNLLSTFMMRYP--GALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLD 342 + L+ + R+ L AR + FA + T K+AE+ A + + +L + Sbjct: 297 VAQLIRQQVTRFSVNEVLTARLSGTTFAVAISGMTEKQAEAFALAFAREMASLHGKGLTP 356 Query: 343 RDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK--GRGNVRWR 400 ++ HIG A+ Q +++ A+ A R A ++G N+ + + L + +W Sbjct: 357 FSEVGHIGF-AFHWNQSLSELLSEADMALRAAQIKGPNTTHYHQNHLISEFDTLTATQWI 415 Query: 401 TLIEQMLSRGGPRLYQKPAVTREG--QVHHRELMCRIF-DGNEEVSSAEYMPMVLQFGLS 457 L+ +++ L + + + V H E++ RI D N+ + ++ ++PM+ +GL+ Sbjct: 416 ALLNRVIEEKRFTLLVQAVMNPDDPPSVKHHEVLLRIANDENKLIPASLFIPMIHHYGLT 475 Query: 458 EEYDRLQISRLIPLLRYWPE---ENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRII 514 + D++ ++ ++ LL PE + +A+ + S+ P F WL L + + + KRI+ Sbjct: 476 KALDKMIVATVLDLLDR-PENKMKKIAVNLMPASVSDPEFVNWLSSELAR-KPALAKRIL 533 Query: 515 IELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVR 574 EL + + Q++ Q + V++ G + ++ G + + S I +L LK+ +R Sbjct: 534 FELDDYGIAQNLHAAQTFQQAVSSSGAGIGIDHFGRNVTTLSSIGKLTPVYLKIDGSFIR 593 Query: 575 NIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG------DFFA 628 I+K +NQ V+ LV V A + + E + + V G QG + + Sbjct: 594 LIDKNRDNQRFVEILVNMAHAQDICVIAESIENEKEMELVKNLHVDGLQGYALHRPEIWM 653 Query: 629 SSQPLDTN 636 S+ P D N Sbjct: 654 SNIPEDRN 661 >UniRef50_Q21LK5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21LK5_SACD2 Length = 587 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 109/446 (24%), Positives = 190/446 (42%), Gaps = 19/446 (4%) Query: 212 QHSRLD--TLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNML 269 QH L T I D TGLNNR + L E Q ++ I + ++ Sbjct: 146 QHQLLQYATEIEYRKTHDELTGLNNRKALEAYLNKTFESQSLFSKPIAMIYINVDQLKVV 205 Query: 270 SDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLI 329 +DT GH +E L ++L + Y LAR +FA + T+++AE +A + Sbjct: 206 NDTCGHIAGDELLKQLVHILKNTDVTYD--YLARVGGDEFALIKEDATIEQAEEVAEIIR 263 Query: 330 KAVDTLP---NNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYD 386 V+ + ++K + I + + + R TE ++ A++A A + G N ++ Sbjct: 264 STVEDISFSWDDKNFRQSLSIGVALSSPRLCTITE-IIGAADAACEQAKVAGKNRVHVHK 322 Query: 387 D--SLPEKGRGNVRWRTLIEQMLSRGGPRLYQKP--AVTREGQVHHRELMCRIFDGNEE- 441 D + E R +RW + I+Q L+ +P A+ Q H EL+ R D N Sbjct: 323 DTRAASEDSRHQMRWVSRIQQAFIEDRFELFFQPIVALHHSDQYVHYELLIRYRDENNRF 382 Query: 442 VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPE-----ENLAIQVTVESLIRPRFQR 496 VS ++P ++GLS + D ++ + L PE + +I ++ SL + + Sbjct: 383 VSPNAFLPAAEKYGLSTQIDLWVLTTALDFLASNPEHTYKLQCCSINLSAHSLSSHQTRS 442 Query: 497 WLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTS 556 + ++ C K + E+ E +++ I + +G R A++ G S Sbjct: 443 AIAQLIIGCGFPPEK-VCFEITETSAIKNLDEATAFIEEMKLIGCRFALDDFGTGFSSLG 501 Query: 557 WIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQ 616 ++K LNV+ LK+ +RNI + +V ++ + A V + TL Q Sbjct: 502 YLKSLNVDYLKIDGAFIRNIVHDKIDHAMVTAVASIGKEMNIATIAEFVENEEIKSTLSQ 561 Query: 617 RGVTGGQGDFFASSQPLDTNVKKYSQ 642 V GQG FA PL+ V Y++ Sbjct: 562 MAVDYGQGFGFAKPMPLNDAVAYYNK 587 >UniRef50_D0I8X1 GGDEF and EAL domain-containing protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I8X1_VIBHO Length = 633 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 116/531 (21%), Positives = 226/531 (42%), Gaps = 39/531 (7%) Query: 109 VPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIG--FIIVMLFLAVRWLQRQLAGQE 166 V ++ HPG + + +++ +T L+ IG F+I M +A++ L R L + Sbjct: 122 VHVVSHPGYAYQQMWR-----------STIQLSVWIGILFVIAMFVIALQ-LSRSLRPLK 169 Query: 167 LLETRATRILNGERGSNVLGTIYEWPPRTS-----SALDTLLREIQNAREQHSRLDTLIR 221 + +RA I N G PP T A++ + +++ EQ ++ +R Sbjct: 170 TITSRAKDI-----ARNKFGEPIPLPPTTELKTVVRAINQMSSQLEAYFEQQAKEADRLR 224 Query: 222 SYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTW---GHSQV 278 +A +D +GL NR FF QL + L + G G+VM+ ++++DT+ G +Q Sbjct: 225 EHAYRDTVSGLGNRSFFIGQLKSWLSES---GIGGLVMV----KVDLITDTYRNQGFTQG 277 Query: 279 EEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNN 338 + L+T + +R + +F L P+ T ++ + I ++ V+ + ++ Sbjct: 278 DALVGQFAKKLNTTLTD-ADCTASRISKDEFVILAPNGTGEDLQIIGESVMAIVNDMQHD 336 Query: 339 KMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNV 397 M + IG+ +D ++ A++A A + + D + + G Sbjct: 337 PMGISPPKVAIGLAVNSVDNRDASALLSQADNALTQARNTPNHPIFLIDQTENDASMGKQ 396 Query: 398 RWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLS 457 +W+ LI ++ +PA + + V H+E+ I G + +A ++ V Q L Sbjct: 397 QWKALILDAMAHDWFTFKFQPASSSDQAVIHQEVFSAIEKGGQYYGAAHFLGAVEQLELG 456 Query: 458 EEYDRLQISRLIPLLRYWPEEN-LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIE 516 E +DR +S +I L P+ LA+ +T S+ P F RWL T MQ ++ R+ E Sbjct: 457 ESFDRYVVSNMIERLTDDPDLGPLAVNLTQNSVTNPSFIRWLT-TTMQKHRNMAGRLFFE 515 Query: 517 LAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNI 576 + E + + + + V+ G S ++ + +K+ N+ Sbjct: 516 IPEGVFVRFPDHVSLLTEQAHRFRFGFGVDNYGRNFQSLDYLNKFKPSYVKIDFAYTSNL 575 Query: 577 EKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFF 627 +++ +L S+ + AT V + ++ L + V G QG F Sbjct: 576 NDESQSHVLA-SICRTAHNLNITTIATRVETEAQLNKLSELFVNGFQGFIF 625 >UniRef50_B9MBY4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MBY4_DIAST Length = 790 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 112/452 (24%), Positives = 206/452 (45%), Gaps = 37/452 (8%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 + +I + QH RL+ L A D TGL NR +F QL + + + G +++ Sbjct: 340 CMFTDISEEKAQHQRLEFL----AHCDPLTGLPNRAWFGEQLDSAVRQAQDSGEQMALLL 395 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLK 319 + L F ++D++GH+ +E +T + + PG LL R + A L H R Sbjct: 396 LNLDRFKDVNDSYGHAVGDEVLRHITRQVEQSL--RPGDLLGRLAGDEIAVLARHLRHAD 453 Query: 320 EAESIAGQLIKAVDT---LPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAG 375 A ++A LI A T P+ + + +GIC + + + TE +++ A S+ A Sbjct: 454 GAAAVARHLIAAASTPWCTPDGIQVVVG--VSVGICMFPAHARTTEALLQGAHSSVYGAK 511 Query: 376 LQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCR 434 +G ++ +D+SL + R + + L++G RLY +P V G++ E + R Sbjct: 512 ARGRGAYCFFDESLIQAARERLEIEARLRVALAQGHLRLYYQPQVCIVTGRIMGAEALVR 571 Query: 435 IFDGNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW-----PEENLAIQVTVES 488 D E +S A ++P+ G+ + + + W PE LAI ++ Sbjct: 572 WLDPQEGMISPARFIPVAETSGVIGPLGQWVMRAACEQGQRWRADGLPEIRLAINLS--- 628 Query: 489 LIRPR-FQRWLRDTLMQCEKSQR------KRIIIELAEADVGQHISRLQPVIRLVNALGV 541 PR FQ L D ++ + + + +EL E+ + + ++ V++ + LGV Sbjct: 629 ---PRQFQ--LTDVAACAAEALKASGFPARCLELELTESVLAERPDEIRAVLQRLQQLGV 683 Query: 542 RVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVY 601 R+AV+ G S + +K +++LK+ G +R+I + ++ + ++V V Sbjct: 684 RMAVDDFGTGYSSLAHLKRFPIDVLKIDQGFIRDIPRSADDMAISAAIVAMGHSLGLSVL 743 Query: 602 ATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 A GV + + L +RG QG + S+PL Sbjct: 744 AEGVETPQQLAFLRERGCDAYQG--YLCSRPL 773 >UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM30_THASP Length = 1002 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 119/457 (26%), Positives = 194/457 (42%), Gaps = 45/457 (9%) Query: 205 EIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLP 264 +I RE +R IR A D TGL NR ++L + + G G++M++ + Sbjct: 559 DITGRREAEAR----IRQLAYYDTLTGLPNRSLMWDRLRHAIAASARSGASGMLMLLDID 614 Query: 265 DFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGAL-----LARYHRSDFAALLPH---- 315 F +L+DT GH + LL R GAL +AR DFA ++ + Sbjct: 615 HFKLLNDTQGHEVGD-------ALLREVAQRLRGALREEDTVARVGDDDFAIVVENLGAD 667 Query: 316 --RTLKEAESIAGQLIKAVDTLPNNKMLDRDDM---IHIGICAWRS-GQDTEQVMEHAES 369 + AE IA L + V T P L +G+ +R + V++ AE Sbjct: 668 RDEAIGRAEKIAEHLHRCV-TAPCELGLASGPYHVGASLGLTLFRGRNAAADAVLKQAEV 726 Query: 370 ATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHR 429 A A G N + +++ + L+ G RLY +P + R G+V Sbjct: 727 AVARAKDDGRNLIRFFSEAMQAVVAARAELELKLRAALACNGFRLYYQPQLDRNGRVIGA 786 Query: 430 ELMCRIFDGNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE------NLAI 482 E + R FD E +S A ++P+ + GL + LR W +L+I Sbjct: 787 EALIRCFDAEGEMISPAAFIPLAEETGLIVPIGEWVLETACAQLRAWQRTPSTAGLSLSI 846 Query: 483 QVTVESLIRPRFQRWLRDTLMQCEKSQRKRII-----IELAEADVGQHISRLQPVIRLVN 537 V+ +P F + + +R RI IEL E+ V I +R + Sbjct: 847 NVSARQFHQPDFVGKVAAAI------ERHRIRPGGLEIELTESVVIGDIETTVLRMRQIK 900 Query: 538 ALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTS 597 ALGVR A++ G S S++K L + LK+ VR++EK T ++ +V++++ Sbjct: 901 ALGVRFALDDFGTGYSSLSYLKRLPFDQLKIDQMFVRDMEKDTSSEAIVRAILALSRSLD 960 Query: 598 TQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLD 634 +V A GV + ++ + L+ RG QG F P++ Sbjct: 961 LKVVAEGVETAAQHELLLTRGCELFQGYLFGRPVPIE 997 >UniRef50_C6MD86 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MD86_9PROT Length = 1029 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 98/415 (23%), Positives = 185/415 (44%), Gaps = 14/415 (3%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A +D TGL NR F QL +L+ + + ++ L DF ++DT+GHS + Sbjct: 611 AERDPLTGLYNRHRFQEQLESLIANCLRSRGKFALLYFDLDDFKYINDTYGHSAGDTVLV 670 Query: 284 TLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLP---NNKM 340 +S+ + + + AR +FA L + ++ + ++I A+ ++P + + Sbjct: 671 RAAGEISSIIRQI--EIFARLGGDEFAILSSIQPDEDINVLPSRIITAISSIPLRFHGRN 728 Query: 341 LDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSL--PEKGRGNVR 398 + + + I G+ TE ++ HA++A A QG N+WAIYD + E + Sbjct: 729 IRLTSSLGVAIFP-EHGETTEDLIAHADTAMYQAKTQGKNTWAIYDSTRDDSEVMLQRMT 787 Query: 399 WRTLIEQMLSRGGPRL-YQKPAVTREGQVHHRELMCRIFD---GNEEVSSAEYMPMVLQF 454 WR+ I Q L L +Q +T + + H E + R+ D + +++P+ + Sbjct: 788 WRSRIAQALEHDLFELHFQGVYLTSDKMLSHIEALIRMRDLERSGHLIMPGQFIPIAEKS 847 Query: 455 GLSEEYDRLQISRLI-PLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRI 513 G + DR + I L LAI ++ + P ++R L++ + R+ Sbjct: 848 GQILDIDRWVVKECIEKLANDLNMPPLAINISGRTFDEPSLPLYIRKLLLE-RGVEPGRL 906 Query: 514 IIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLV 573 IIEL E I Q I ++ G +V ++ G + ++K L VE+LK+ + Sbjct: 907 IIELTETAAVSDIQDAQRFIESIHQSGCKVCLDDFGSGFSTFGYLKYLGVEILKIDGLFI 966 Query: 574 RNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFA 628 ++ +NQ+ V+++V+ G A V ++ + + G+ QG F Sbjct: 967 SDLHNNRDNQVFVKAMVDVAHGLGKITVAEYVEDEDTFRMVKKLGIDLVQGYNFG 1021 >UniRef50_Q1PVH4 Conserved hypothetical response regulator protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVH4_9BACT Length = 685 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 113/465 (24%), Positives = 223/465 (47%), Gaps = 39/465 (8%) Query: 190 EWPPRTSS----ALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATL 245 E P SS +++ + R+I + S+L L A D T L NR F +L Sbjct: 228 EAPVFDSSKNVISIEGIARDITEIKTSQSQLVFL----ADHDPLTCLFNRRRFKEELELR 283 Query: 246 LEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYH 305 L + ++ G ++ + L +F ++DT GH +E L+ +L + + +LAR Sbjct: 284 LLEAQRNHIKGALLFLDLDNFKYVNDTLGHQHGDELLIKLSCILKERLRQ--TDILARLG 341 Query: 306 RSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHI----GICAWRSGQDT- 360 +FA +LP+ ++A+ I+ QL V+ N LD + +HI GI + + DT Sbjct: 342 GDEFAVILPNTEEEQAQHISKQL---VELTRNCLALDSLNPLHITVSIGIAMFPAHGDTA 398 Query: 361 EQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVR--WRTLIEQMLSRGGPRLYQKP 418 E ++ +A+ A A +G + I+ SL K + W+ I+ L + LY +P Sbjct: 399 ETLLANADMAMYQAKDEGRDRGCIF--SLEHKIHIETQYDWKRRIKIALEQNSFALYLQP 456 Query: 419 AVT-REGQVHHRELMCRIFDGNEEVSSA-EYMPMVLQFGLSEEYDRLQISRLIPLLR--- 473 + + ++ E++ R+ + N+EV +++ +FG+ E DR + I +++ Sbjct: 457 IINVKTRKITAYEVLLRLTEKNQEVVPPLKFLGTAERFGIIHEIDRWVVVNAIRIIKELK 516 Query: 474 -----YWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISR 528 + E NL+ + ++ + +R + + +++ E +I E+ E + ++I++ Sbjct: 517 LHENGIFLEINLSGKAFSDNELLSIIKREIGENILRPE-----MLIFEITETAIIENIAK 571 Query: 529 LQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQS 588 Q I + ++G R A++ G S +++K L V+ LK+ ++++ + + +Q LV+ Sbjct: 572 AQHFIATLKSIGCRFALDDFGSGFSSFNYLKHLPVDYLKIDGSFIQHLSQNSVDQHLVKG 631 Query: 589 LVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 +VEA G A V ++ +Q L + G+ QG +F +PL Sbjct: 632 MVEAARGLKKLTIAEFVETKETFQLLKEIGIDYAQGHYFG--KPL 674 >UniRef50_B5JW24 PAS sensor diguanylate cyclase and phophodiesterase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW24_9GAMM Length = 796 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 123/484 (25%), Positives = 213/484 (44%), Gaps = 36/484 (7%) Query: 164 GQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSY 223 G L R++NG G N + + E +I AR+ L + Sbjct: 329 GSPLWVRETARVINGRHGENQVLIVSE--------------DISEARQ----LSNQLSHQ 370 Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A+ D TGL NR F+ +L L+E + ++ + L F +++DT GH +E Sbjct: 371 ASHDALTGLVNRGEFERRLRQLVERAHVDDSGHALLYLDLDQFKIINDTCGHVAGDELLR 430 Query: 284 TLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDR 343 L LL + + G LAR +F L+ + T+++AE +A + V + + Sbjct: 431 QLAGLLKHKVRK--GDTLARLGGDEFGVLVENCTMEDAERLAQTMCDVVASFQFFWGVSS 488 Query: 344 DDM-IHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGR--GNVRW 399 + + IG+ + SG D +M A+SA A G N IY ++ E R G ++W Sbjct: 489 FRIGVSIGLASIASGSGDYADIMSQADSACYAAKDLGRNRVHIYRENDAELARRFGEMQW 548 Query: 400 RTLIEQMLSRGGPRLYQKPAV----TREGQVHHRELM-CRIFDGNEEVSSAEYMPMVLQF 454 + IE L + LY +P V TR H+ L+ R DGN V A +M ++ Sbjct: 549 VSKIESTLEQDRFELYFQPIVPIDNTRLDGRHYEVLVRMRDVDGNI-VPPASFMSAAERY 607 Query: 455 GLSEEYDRLQISRLIPLLRYWPE--ENLAI---QVTVESLIRPRFQRWLRDTLMQCEKSQ 509 L DR +S+ + L P+ +NL++ ++ ++L+ F ++ D L Q Sbjct: 608 NLMGRIDRKVVSQTLRWLSLHPDHLKNLSVCSVNLSGQTLMDDDFLEFIFDELKQWNVDP 667 Query: 510 RKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLH 569 RK + E+ E +++++ IR + G + +++ G L S +++K L V+ +K+ Sbjct: 668 RK-LCFEVTETAAIENLTKASDFIRSLKDRGCKFSLDDFGSGLSSFAYLKNLPVDYIKID 726 Query: 570 PGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFAS 629 VR+I K + +V+S+ E + A V L GV QG + + Sbjct: 727 GLFVRDIVKDPIDYSMVRSINEIAQVMGKKTVAEFVEDELILNALRNIGVDYAQGYYISR 786 Query: 630 SQPL 633 QP+ Sbjct: 787 DQPI 790 >UniRef50_C8VWV7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWV7_DESAS Length = 1021 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 109/454 (24%), Positives = 201/454 (44%), Gaps = 35/454 (7%) Query: 204 REIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRL 263 R+I N + +L L A+ D T ++NR + L + + K+G G++++I L Sbjct: 586 RDITNRKRFEQKLQYL----ASHDPLTNISNRYSLEEYLTRFVA-KAKLGRTGVLLLIDL 640 Query: 264 PDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAES 323 +F M++DT+GH+ +E L N L + +AR+ +F LL + T+ EA Sbjct: 641 DNFKMVNDTYGHAAGDEVLIALVNTLRLNLREED--FIARFGGDEFVVLLDNTTVAEAML 698 Query: 324 IAGQLIKAVDTLPNNKML------DRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQ 377 IA +L AVD NN + I IG QD ++++ ++A A Sbjct: 699 IAEKLRNAVD---NNAFCLCTFKTCFNLTISIGAVLIDGNQDAQKLLSIVDAALYVAKES 755 Query: 378 GGNSWAIYDDSLPEKGRGNVRWRT-----LIEQMLSRGGPRLYQKPAVTRE-GQVHHREL 431 G NS + ++ V T LI+Q L Y +P V + G + H E Sbjct: 756 GRNSIKYLE---ADEFSKYVYAETNEIIGLIKQALREDKFISYYQPVVKIDNGTIAHYEA 812 Query: 432 MCRIFDGNEEVS-SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESL- 489 + R+ N E+ ++P+ ++GL + D+ + + L PE + I ++ SL Sbjct: 813 LTRLIGKNREIILPGIFIPVAERYGLMPQIDQWVVRNSLAALVQNPEIKIFINISGMSLG 872 Query: 490 ---IRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVN 546 + ++ +RD+ K R+ E+ E + + R + IR + LG + A++ Sbjct: 873 QDTLLESIEKQIRDS-----KIDPLRLGFEITETTAIKDLPRAERWIRRLKKLGCQFALD 927 Query: 547 QAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVR 606 G+ S S+++ L V+++K+ +R+I ++Q+++ + A V Sbjct: 928 DFGMGFSSFSYLRVLPVDIIKIDGSFIRDINDNPTQHAILQAIINIARTLGKKTIAEYVE 987 Query: 607 SRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 ++ Q+L + + GQG F P N +Y Sbjct: 988 NKEILQSLHKLNIDYGQGYFLGKPAPEFQNSSRY 1021 >UniRef50_A5IG87 Two component histidine kinase, GGDEF domain protein/EAL domain protein n=4 Tax=Legionella pneumophila RepID=A5IG87_LEGPC Length = 639 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 98/442 (22%), Positives = 198/442 (44%), Gaps = 28/442 (6%) Query: 198 ALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGI 257 A++ ++ ++++ + + +R+ QD TG++NR +F LA +L+++++ G Sbjct: 211 AMNQMVTKVKSLFQDQLKQTESLRTQVYQDSLTGMSNRRYFLQHLALILDNEDEF-IPGY 269 Query: 258 VMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFA------- 310 VMM+ + + L+ G+ Q ++ T+ + ++ + + LAR + + FA Sbjct: 270 VMMLVIDGLDELNQKQGYQQGDQLVLTVAKICKSYWKQSSVSTLARINGTTFALISHERD 329 Query: 311 ALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESA 370 L+ + KE E I Q I + H+G ++ Q ++ + A Sbjct: 330 PLVFEKECKEFEQILSQGITDIKICET----------HMGAASYFLHQPVSNLLSIVDQA 379 Query: 371 TRNAGLQGGNSWAIYDDSL--PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHH 428 + A G D+ P+ G+ ++L ++ +S LY + AVT H Sbjct: 380 VKKARETGVFYCQKEHDTYKYPQLISGDEIRKSLEQKKIS-----LYAQ-AVTDGKNCFH 433 Query: 429 RELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVE 487 +E+ RI + EE+ + ++P+ + GL+ D+ ++ L ++ + A+ ++ + Sbjct: 434 KEVFVRIRNQEGEELGAGYFIPVAEKLGLAYLIDQYVLNEL-TVMDIATHTHFALNISED 492 Query: 488 SLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQ 547 +L L + + + +E+ EA V H S + I+ LGV V +++ Sbjct: 493 TLTNKVNSTGYLRQLEATPAAVLRNLSLEINEAHVLSHFSNSKFFIKQAKKLGVTVGIDR 552 Query: 548 AGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRS 607 G+ ++ +LN++ LKLH LV +I++ Q + E V AT V S Sbjct: 553 VGIKFSPLHYLSDLNIDYLKLHGSLVTDIDENESKQFFIHYFNEMAKTMDIAVVATQVES 612 Query: 608 RSEWQTLIQRGVTGGQGDFFAS 629 ++WQ L + GQG F +S Sbjct: 613 EAQWQALQIVHIPWGQGRFLSS 634 >UniRef50_Q3SME1 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SME1_THIDA Length = 928 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 100/415 (24%), Positives = 186/415 (44%), Gaps = 16/415 (3%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A +D TGL NR F +LA + D ++ VM L +F ++D++GH + Sbjct: 502 AERDALTGLYNRHRFQQELARTMLDSDRQKMQCAVMFFDLDEFKTINDSYGHRAGDALLI 561 Query: 284 TLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLP---NNKM 340 + +S + R +LAR +FA LLP EAE++A +++ A+ +P + Sbjct: 562 RVAGEISALVRR--NEVLARLGGDEFAILLPALQDNEAEALADRVVHAIAQIPFRFEGQS 619 Query: 341 LDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIY--DDSLPEKGRGNV 397 L +GI + + D + ++ A+ A A G N+W ++ D + + R + Sbjct: 620 LRV--TTSVGIAYYPAHAVDADDLVARADIAMYQAKDAGKNTWRVFRADSAADSEMRTRL 677 Query: 398 RWRTLIEQMLSRGGPRL-YQKPAVTREGQVHHRELMCRIFD---GNEEVSSAEYMPMVLQ 453 W I L +G +L +Q +G + H E + R+ D ++ + ++ + Sbjct: 678 SWGERISNALDKGLFQLHFQGVYRADDGALSHLEALVRMTDEHRPDQLIMPVHFIQRAEK 737 Query: 454 FGLSEEYDRLQISRLIPLLRYWPE-ENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKR 512 G + DR + I LL P ++A+ ++ SL P + + + L + + R Sbjct: 738 SGRILDIDRWVVHETIQLLAANPCIPSIAVNLSGRSLSEPSLPQTIGNGLREAGVNP-SR 796 Query: 513 IIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGL 572 +I E+ E + Q +I + LG V ++ G+ S +++K L+V+ +K+ Sbjct: 797 LIFEITETAAVADLQDAQRMIEALRQLGCGVCLDDFGVGFASFAYLKHLDVDTIKIDGIF 856 Query: 573 VRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFF 627 +R++ +NQ+ VQ++V G V A V + L Q GV QG + Sbjct: 857 IRDLPNDPDNQVFVQAMVSVALGLGKSVVAEYVEDGATLALLRQFGVDLVQGYYL 911 >UniRef50_Q6AQX8 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AQX8_DESPS Length = 651 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 100/461 (21%), Positives = 196/461 (42%), Gaps = 23/461 (4%) Query: 188 IYEWPPRTSS---ALDTLLREIQNAREQHS---RLDTLIRSYAAQDVKTGLNNRLFFDNQ 241 I E P+T + ++ R RE S ++ R A D TGL NR + Q Sbjct: 195 IQEKLPKTKELRQVVQSMNRMTNQVREMFSGQVKIAERFRRNAYSDQLTGLGNRRYITGQ 254 Query: 242 LATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALL 301 + LE + HG ++M++L + +++ G + +E + +++ L Sbjct: 255 VEARLESGGE-SMHGALLMLQLDNLQKVNELDGFAAGDELLKKVADIIKQETKMLNDVAL 313 Query: 302 ARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTE 361 AR DFA + + +A ++ + V L D++ HIG + Sbjct: 314 ARLTGGDFAIFISEISSVAVYDLAEKISQKVTRLAVENASHSDNIAHIGGVVYEETPTLP 373 Query: 362 QVMEHAESATRNAGLQGGNSWAI------YDDSLPEKGRGNVRWRTLIEQMLSRGGPRLY 415 +++ A++A + A QG N W + DD + +G W+ +E +L RG L+ Sbjct: 374 KLLAEADNALQAARQQGPNKWLVNFLSSGADDLI----KGKSWWKETLENVLERGEIILF 429 Query: 416 QKPAV--TREGQVHHRELMCRI-FDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLL 472 ++P + T + +V H+EL+ RI D E VS+ ++P+ + L D++ + ++ Sbjct: 430 RQPVMNSTDQNRVQHQELLSRIAMDSGEIVSAGVFVPLAERLQLVSRLDKVVLEKVFAQK 489 Query: 473 RYWPE-ENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQP 531 + +A+ V+ SL F W+ L Q + + II E E Q++ ++ Sbjct: 490 EKMADLHTIAVNVSPSSLDDSAFVDWVLAELGQLQ-DKSIHIIFEFPEFGAVQYLDVVKD 548 Query: 532 VIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRT-ENQLLVQSLV 590 R + LG + ++ G + + ++K L E +K+ + ++ +++ + +L Sbjct: 549 FARKIQKLGHGIGLDHFGQSFSNFGYLKSLRPEYVKIDRAFTKELDADNGDSEFFIGALC 608 Query: 591 EACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQ 631 +V A GV + L++ V QG F + Sbjct: 609 GVAHSLDIRVIAEGVERAEQVDLLVELNVDALQGYLFGEPK 649 >UniRef50_Q56669 Mannose-sensitive hemagglutinin D (mshD) (Fragment) n=1 Tax=Vibrio cholerae RepID=Q56669_VIBCH Length = 208 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 58/146 (39%), Positives = 85/146 (58%), Gaps = 1/146 (0%) Query: 455 GLSEEYDRLQISRLIPLL-RYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRI 513 G DR S ++ L R E L++ + V R+ RW+R+ LMQ S R + Sbjct: 20 GYEAMLDRAVFSSVVSFLKRSELVEPLSVNLHVVPFNDKRYARWIRNELMQMPFSLRTAL 79 Query: 514 IIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLV 573 E +EA + H+ ++P+IR++ LG ++ V QAG T+VST +IK+L V LKLH L+ Sbjct: 80 SFEFSEAHLVNHLDYMRPIIRMLAGLGCKIVVGQAGRTIVSTHYIKDLKVNYLKLHRSLI 139 Query: 574 RNIEKRTENQLLVQSLVEACSGTSTQ 599 + I++R ENQL V+SLV C GT Q Sbjct: 140 KKIDQRHENQLFVRSLVGVCGGTPKQ 165 >UniRef50_B9Z392 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z392_9NEIS Length = 709 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 124/504 (24%), Positives = 209/504 (41%), Gaps = 47/504 (9%) Query: 155 VRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWP--------PRTSSALDTLLREI 206 VR++ GQ +E R RG + +E P+ SS L + R++ Sbjct: 210 VRYVLEHRTGQRAIEFRIA-----SRGGEIAERHFEASLVPVALDLPQLSSRLYGVARDV 264 Query: 207 QNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDF 266 + + R+ L A D+ TGL NR F ++L + ++ G V+ + L F Sbjct: 265 TDKKHAEHRMAYL----AYHDLLTGLPNRALFRDRLGLAIMQAKRKGRQVAVLFVDLDRF 320 Query: 267 NMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE-AESIA 325 + +DT+GH + +E + L + LAR +F LLP + KE A +A Sbjct: 321 KLANDTFGHIKGDELLKQVGQRLQCVLRECD--TLARLGGDEFTILLPDLSGKEDAALLA 378 Query: 326 GQLIKAVDTLPNNKMLDRDDM---IHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNS 381 G+L+K V P + +D DD+ + IGI + G D E ++ HA+ A QG N Sbjct: 379 GKLVKEV-AAPFS--IDGDDVFLTVSIGIAVFPDDGDDIETLLRHADIAMYQVKAQGKNG 435 Query: 382 WAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIF----- 436 + + + +R + + L LY +P V + + R + C Sbjct: 436 FGFFLPVMDAAASQRLRMENEVRRALELEQFELYYQPQVEFDSR---RIIGCEALIRWPH 492 Query: 437 DGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIR 491 V ++ ++ + GL + I R LR W L ++ V E L+ Sbjct: 493 PTRGLVPPGAFLGVIEEIGLMKPLTYWVIERACQTLREWKLAGLELSRMSVNVPPEVLVD 552 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNAL---GVRVAVNQA 548 F +L T+ + +R+ IE+ E I+ Q + + L G+RVA++ Sbjct: 553 DDFYDYLIATVDRY-GIRRQSFEIEITE---NAFIADQQAMSLKLAGLAEEGIRVAIDDF 608 Query: 549 GLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSR 608 G S S+++ L V LK+ VR IE E+ +V+++V +G + + A GV + Sbjct: 609 GTQYSSLSYLRHLPVTTLKIDQSFVREIEAGKEDSPIVRAIVAIAAGLNLNLVAEGVETE 668 Query: 609 SEWQTLIQRGVTGGQGDFFASSQP 632 + L G QG F P Sbjct: 669 VQADYLGSLGAVEMQGYLFGKPMP 692 >UniRef50_Q1H2A5 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2A5_METFK Length = 722 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 110/438 (25%), Positives = 193/438 (44%), Gaps = 19/438 (4%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 Q L+ ++ A D TGL NR +L + E + HG VM + L +F ++D Sbjct: 279 QRKILEQSVQRMALYDDLTGLPNRRLMVERLQMIREACVRSHRHGAVMFLDLDNFKEIND 338 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL------PHRTLKEAESIA 325 T GH Q + + L + + +AR +F LL P + +A ++A Sbjct: 339 THGHEQGDRLLKQVGQRLRENIRQVD--TVARAGGDEFIILLADLDEDPAKATAQAYNVA 396 Query: 326 GQLIKAVDT--LPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWA 383 +L A+ T + N +L + I + + ++ TE + +HA+ A A QG N + Sbjct: 397 EKLRNALSTPYIFNRIVLHTSTSVGIVMFSDKAKPKTE-LFKHADMALYRAKAQGKNRIS 455 Query: 384 IYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCR-IFDGNEEV 442 ++D SL + + Q L R RLY +P V R+G+V E + R I V Sbjct: 456 MFDPSLQAEVLEYASLLADLRQALQRDEFRLYFQPVVNRDGKVIGHEALIRWIHPVRGMV 515 Query: 443 SSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE------NLAIQVTVESLIRPRFQR 496 +++P+ Q GL +E + +S L W E+ L++ V+ + F Sbjct: 516 LPGQFIPVAEQTGLIQEIGQWVLSMACKQLNVWSEDAVKSQWTLSVNVSAKQFRDMDFVG 575 Query: 497 WLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTS 556 + D + Q + KR+ +EL E+ I + +R + +GV +++ G S S Sbjct: 576 KVHDAIRQ-SGADPKRLWLELTESMFHTDIVQTIEKMRALQDIGVHFSMDDFGTGYSSLS 634 Query: 557 WIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQ 616 +K L ++ LK+ VR++ + +V++++ + V A G+ S ++ L Q Sbjct: 635 VLKLLPLDQLKIDRSFVRDVIDDPNDAAIVRTILALAGILNLTVVAEGIESSEQFDFLEQ 694 Query: 617 RGVTGGQGDFFASSQPLD 634 G QG FF P+D Sbjct: 695 HGCQAFQGYFFGKPVPMD 712 >UniRef50_C0QUQ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Persephonella marina EX-H1 RepID=C0QUQ4_PERMH Length = 654 Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 94/435 (21%), Positives = 196/435 (45%), Gaps = 18/435 (4%) Query: 210 REQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNML 269 R + L+ + + D TGL NR F L L+ K V++I + DF ++ Sbjct: 221 RTEKVELEKRLNYLYSHDELTGLPNRKKFIENLKKALDYARKNNHLVAVILIDIKDFKII 280 Query: 270 SDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLI 329 + +G+ ++ +++ L M +AR F LL + E + G++ Sbjct: 281 NKQYGYETGDKVLISISKKLEELMTDVDS--VARVGDDKFGILL--YAFRSFEKLTGKIE 336 Query: 330 KAVDTLPNNKMLDRDDM---IHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIY 385 +++ ++ + I +G+ + + G + + ++AE A A G S+ + Sbjct: 337 DVFNSVEGEYSINGFKIFVEIKMGVSVFPKDGVYPDDLYKNAEIALLKAKRTPGKSFEFF 396 Query: 386 DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNEEVS- 443 ++ + + + I +++ +Y +P + + G++ E + R+ DGNE V Sbjct: 397 SKNIYSEITRILNLKEKIRKVIEENNILIYYQPIINLKTGEIDSLEALFRLNDGNETVIL 456 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVES--LIRPRFQRWLRDT 501 + +P+ + GL E ++ ++ + P+ N+ + V + S L +P F R D Sbjct: 457 PKDIIPVAEETGLIVELGERILNSVLKFSKKVPQ-NIKLSVNISSIQLNKPMFDR---DF 512 Query: 502 LMQCEKSQ--RKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIK 559 L+ E S RI+IEL E + +S +R + G+++A++ G S +++K Sbjct: 513 LLSLENSDIPPDRIVIELTETAIMDSVSENITKLRNLKEKGIKIAIDDFGTGYSSLNYLK 572 Query: 560 ELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGV 619 L V+ LK+ V+ I + ++++V++++ + + A GV + + + LI+ G Sbjct: 573 ILPVDFLKIDRSFVKGIGRDRNDEMIVKTIISMAKSMNLKTIAEGVETEEQLRFLIENGC 632 Query: 620 TGGQGDFFASSQPLD 634 GQG +F P D Sbjct: 633 DYGQGYYFGKPVPED 647 >UniRef50_B9L5S2 Sensory box/ggdef family protein n=1 Tax=Nautilia profundicola AmH RepID=B9L5S2_NAUPA Length = 652 Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 109/528 (20%), Positives = 232/528 (43%), Gaps = 46/528 (8%) Query: 122 VYQDPMGNYFHSLMTTAPLTGAIGFI--IVMLFLAVRWLQRQLAGQEL--LETRATRILN 177 +Y P +Y + T + + F+ I+ +F ++ + + + L L+ A R +N Sbjct: 142 LYLFPNKDYLKKIFTYLKIKYVLLFLFTIIFVFFFLKSIYNAVIVKPLVKLKKYADREIN 201 Query: 178 GERGSNVLGTIYEWPPRTSSALDTL--LREIQNAREQHSRLDTLIRSYAAQDVKTGLNNR 235 + IYE+ + T +RE E S D+L R L NR Sbjct: 202 KPKK----FFIYEFDDIKETLAQTFATIREYIEKLEISSITDSLTR----------LKNR 247 Query: 236 LFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMR 295 F + L L+ + +K V+ I + +F ++D +GHS +E ++++LS + Sbjct: 248 KFLNEYLVKLISENQKFA----VVFIDIDNFKDINDFFGHSVGDEIIIEISSILSKHVKN 303 Query: 296 YPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIH------- 348 + ++AR +F + +E L + +D L N+ L R IH Sbjct: 304 HE--IVARIGGDEFVLVFQEYNNEE------DLKERLDLLLNS--LHRTWTIHNQNIGTT 353 Query: 349 --IGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQ 405 IG+ + ++ + E++++ A+ A A G N + I+D++L K ++ +T + Q Sbjct: 354 VSIGVAEFPKTAKSVEELLKFADIALYEAKKMGKNKYVIFDENLKNKINKEIQIKTTMNQ 413 Query: 406 MLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQI 465 L +L+ +P + + E + R + +S +++P+ + G + + Sbjct: 414 ALVNNEFKLFYQPKFDKNKNIIGCEALIRWIRDGQIISPLDFIPIAEKSGFIIQLGNWIM 473 Query: 466 SRLIPLLRYWPEENLAIQVTVE-SLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQ 524 + + + W + + ++++ S ++ R ++++ D +KSQR I +E+ E+ Q Sbjct: 474 EEVAKVQQEWLNKGIKLEISFNVSAVQFRNEKFVNDLKEIFKKSQRNLIEMEITESVFIQ 533 Query: 525 HISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQL 584 + + +I + G+R++++ G S S+++E +++LK+ V I E ++ Sbjct: 534 EKDKAKTIINEIRDYGIRISLDDFGTGYSSLSFLREFEIDVLKIDKSFVDEIYSE-EGKV 592 Query: 585 LVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQP 632 VQ+++ + A GV + ++ L G QG F+ P Sbjct: 593 YVQTILNMAENLHLETIAEGVETEEQFNILKSLGCKYFQGYLFSKPLP 640 >UniRef50_A4A7F0 Protein containing EAL/GGDEF/PAS domains n=1 Tax=Congregibacter litoralis KT71 RepID=A4A7F0_9GAMM Length = 810 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 106/444 (23%), Positives = 197/444 (44%), Gaps = 26/444 (5%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 L +I +E L+T+ A D TGL NR F+++L + E+ GT + Sbjct: 347 CLYSDITPLKEHERELETI----AHFDPLTGLVNRSLFEDRLYQAVATSERQGTFLALAY 402 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE 320 I L F +++D++GH+ + + + ++ + LAR +F AL+ L + Sbjct: 403 IDLDGFKLVNDSFGHAVGDRYLIAIADNMNEALRDTD--TLARIGGDEFIALI--SDLDD 458 Query: 321 AESIAGQLIKAVDTLPNNKMLDRDDM---IHIGICAWR-SGQDTEQVMEHAESATRNAGL 376 E A + + + ML+ ++ IGI + G + ++ A+ A A Sbjct: 459 PEGFAPVVERLLQATSKPVMLEGQEIPVSASIGIARFPLDGLEPGSLVRCADQAMYEAKR 518 Query: 377 QGGNSWAIYDDSL--PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMC 433 QG N + ++D L E G+VR R L ++ L+ +P V G++ E + Sbjct: 519 QGKNRFYVFDRGLVGNEGASGDVR-RALADEEF-----ELFYQPKVNMLTGELLGVEALA 572 Query: 434 RIFDGNEEV-SSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVE----S 488 R + + E++P++ + L E+ +S + +R W + +A QV+V Sbjct: 573 RWRHPHRGLLQPPEFLPLIDRENLQIEFGEWVLSEAVEQIRQWRGQEIATQVSVNIAGVH 632 Query: 489 LIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQA 548 L++ F L + + K + IE+ E ++R+ +I +A GV A++ Sbjct: 633 LLQSNFLESLGSAIARYPDLLAKTLEIEILETSALNDVARVAKIIEYAHAFGVSFALDDF 692 Query: 549 GLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSR 608 G S + ++ L V +K+ VR++ + +E+ +V ++V C G QV A GV + Sbjct: 693 GTGFSSLTHLRRLPVSTVKIDTSFVRDMLESSEDTAIVSAMVGLCRGLGRQVIAEGVSTP 752 Query: 609 SEWQTLIQRGVTGGQGDFFASSQP 632 + Q L+ GQG A+ P Sbjct: 753 AHAQALVNMACNFGQGYAIAAPMP 776 >UniRef50_C6X8Z9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X8Z9_METSD Length = 828 Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 104/457 (22%), Positives = 206/457 (45%), Gaps = 20/457 (4%) Query: 192 PPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEK 251 P R++S + + ++SR I A D+ T L NRL F+ QL L+E Q Sbjct: 373 PERSASGAVMGAMTVASDVTENSRYRKRIEQLAYHDILTELPNRLLFNQQLQILIE-QTP 431 Query: 252 VGTHGIVMM-IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFA 310 + HG ++ I L +F ++DT GHS ++ ++ + + + +LAR +FA Sbjct: 432 INKHGFCLLFIDLDNFKTINDTLGHSVGDKLLIEVSRRIRQLLGK--DDMLARMGGDEFA 489 Query: 311 ALLPHRTLK-EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAE 368 LPH + +A +A ++I A++ + +GI + + +++HA+ Sbjct: 490 ISLPHCLSRLDAALLAARIIDALNVPFEVSSIKFFVSASMGIAFYPEDSSHLDDLLKHAD 549 Query: 369 SATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVH 427 A +A QG N++ Y+ L + L+ Q L++G +LY +P + G++H Sbjct: 550 LAMYHAKRQGRNNFQFYNQELTVNAAERLLMENLLRQALAKGELQLYYQPIMELATGELH 609 Query: 428 HRELMCR--IFD-----GNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL 480 E + R FD ++ + AE M++ G + + + LR P L Sbjct: 610 GAEALLRWNSFDLGMVGPDKFIPIAEERGMIVDIGAWVLREGCRTAVAWNALRSQPCV-L 668 Query: 481 AIQVTVESLIRPRFQRWLRDTLMQ--CEKSQRKRIIIELAEADVGQHISRLQPVIRLVNA 538 AI ++ ++ F + D L + C K E+ E+ + ++ + +++ Sbjct: 669 AINLSSRQFMQQDFLSRITDCLQETGCHPQWLK---FEITESLLLHDSDHIRQTLEALHS 725 Query: 539 LGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTST 598 +G+ +A++ G + ++ + V +K+ + +I TE+ LLV++++ Sbjct: 726 IGITIAIDDFGTGYSALGYLNKFPVSQVKIDRSFISDIATNTESALLVKAIIAMADSLGK 785 Query: 599 QVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDT 635 ++ A GV + + + L Q G QG ++ PL+T Sbjct: 786 ELVAEGVETAEQAKLLSQLGCQYVQGYYYGRPVPLET 822 >UniRef50_Q1PXY5 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXY5_9BACT Length = 829 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 100/431 (23%), Positives = 192/431 (44%), Gaps = 19/431 (4%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + + + ++ A D T L NR F +L L ++ T G ++ + + +F ++D Sbjct: 395 ERKKFEEMLVVMAEHDPLTNLFNRRRFQVELEYWLGYSKRYNTGGALLFLDIDNFKYIND 454 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKA 331 T GH +E LL + P ++AR +FA +LP+ + A S A Q+ ++ Sbjct: 455 TLGHKVGDEILVEFAILLKERVR--PNDIIARLGGDEFAVILPNTNVDHARSFAEQITQS 512 Query: 332 VDTLPNNKMLDR---DDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYDD 387 + ++L+ + +GI + + + ++ A+ A A G N I+ Sbjct: 513 AQ--KHFRVLNERGHNITTSLGIALFPDHSLEADALLACADMAMYGAKEAGKNQCCIF-- 568 Query: 388 SLPEKGRGNVR--WRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNEE-VS 443 SL +K R W I L + +Y +P V R V E + R+ N E + Sbjct: 569 SLEQKQNIESRFLWDKRIRSALGKDDFEIYLQPIVDLRSNAVFGYEALLRMVGENGELIP 628 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLL-RYWPEEN---LAIQVTVESLIRPRFQRWLR 499 AE++P + G + DR + L RY +E L I ++ +++ +++ Sbjct: 629 PAEFLPYAERHGSILDIDRWVVRNAFRLFVRYNMQEKKAVLEINLSGKAITDSGMLSFIK 688 Query: 500 DTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIK 559 + L + R I E+ E+ V ++I + + + G R A++ G+ S +++K Sbjct: 689 EELSASQADAR-YITFEVTESAVVENIEYARYFMNDLCNQGFRFALDDFGIGFCSFTYLK 747 Query: 560 ELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGV 619 L V+ LK+ G +RN+ +Q V+++ + +G ++ A V ++ L + GV Sbjct: 748 HLPVDFLKIDGGFIRNLPDNPTDQCFVKAIADIGNGLEKKIIAEFVENKQTISLLKEIGV 807 Query: 620 TGGQGDFFASS 630 GQG FF+ + Sbjct: 808 VYGQGHFFSKA 818 >UniRef50_C0N942 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N942_9GAMM Length = 945 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 98/426 (23%), Positives = 194/426 (45%), Gaps = 27/426 (6%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A D T L NR F++ LL ++ G+++ + L F ++D+ GH+ ++ Sbjct: 520 ANHDALTELYNRRKFNSDFKKLLNQAQRYKREGMLLFLDLDQFKDINDSCGHNVGDQLLQ 579 Query: 284 TLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDR 343 + S + ++AR +FA +LP L A ++ ++ ++ + + R Sbjct: 580 RVAQ--SLLAISRSTDIVARLGGDEFAIILPETDLHGAITLCEKITDSLKNIDFSHEQAR 637 Query: 344 DDM-IHIGICAWRSGQDT-EQVMEHAESATRNAGLQGGNSWAIY--DDSLPEKGRGNVRW 399 + IGI + T ++++ +A+ A A +G N+W ++ DD + + V+W Sbjct: 638 YTISCSIGITKFPLNNLTVDELVSNADMAMYQAKSKGKNTWHLFTFDDMARTELKARVKW 697 Query: 400 RTLIEQMLSRGGPRLYQKPAVTREGQ-VHHRELMCRIFDGNEEVS-SAEYMPMVLQFGLS 457 + I L+ +L+ +P + + + V H E + R++D N+++ ++ + Q GL Sbjct: 698 KQKIVDALNHNRFQLFYQPIMHIQSRTVSHYEALLRMWDDNDQLHLPGLFIQVAEQTGLI 757 Query: 458 EEYDRLQISRLIPLLRYWPEENL-------AIQVTVESLIRPRFQRWLRDTLMQCEKSQR 510 D + + + + E+NL ++ ++ +++ P Q L + Q +Q Sbjct: 758 HRIDHYVLEQGVAKI---AEQNLQHQDISLSLNLSGHAVVDPELQPLLEHLITQY-GAQA 813 Query: 511 KRIIIELAE----ADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELL 566 ++I EL E AD+ Q +Q +IRL G R +++ G S +++EL V L+ Sbjct: 814 DKLIFELTETAAVADIPQARELMQELIRL----GCRFSIDDFGTGFASFRYLRELPVSLV 869 Query: 567 KLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDF 626 K+ + +I + +++L VQ+LV G Q A V + L GV QG + Sbjct: 870 KIDGSFITHITENEDDRLFVQALVTIAKGMGKQTIAEFVENAETLALLETLGVDYAQGYY 929 Query: 627 FASSQP 632 QP Sbjct: 930 IGKPQP 935 >UniRef50_UPI0001C30E99 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30E99 Length = 994 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 113/458 (24%), Positives = 196/458 (42%), Gaps = 32/458 (6%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 L +IQ+ E+ R + ++ A D TGL NR F+ +L + E+ G G +++ Sbjct: 544 FLGQIQDVSER-VRYEAQLQHMADHDPLTGLLNRRSFERELNQHIHRVERYGAEGAALVL 602 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA 321 + F ++DT GH+ +E + L + + +LAR +FA LLP +EA Sbjct: 603 DIDRFKHINDTLGHNVGDELIVKVAQTLRSRLR--DSDVLARLGGDEFAVLLPKGGQQEA 660 Query: 322 ESIAGQLIKAV--DTLPNNKMLDRDDMIHIGICAW--RSGQDTEQVMEHAESATRNAGLQ 377 E++A ++ +V ++ R +GI + G E V+ +A+ A +A Sbjct: 661 EAVAESILASVRAQSVLTTAGRRRPITTSVGIALFGETGGLSAEDVLVNADLAMYDAKEA 720 Query: 378 GGNSWAIYDDSLPEKG----RGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELM 432 G + A + S E+G + + W I L LY +P V R G V E++ Sbjct: 721 GRDRAATF--SSQERGASRMKARITWAERIRDALEEDRFTLYAQPIVELRSGAVRQHEVL 778 Query: 433 CRIFDGNEEV-SSAEYMPMVLQFGLSEEYDRLQISRLIPLL----RYWPEENLAIQVTVE 487 R+ D EV A ++ + +F L +E DR ++R I + R + + ++ Sbjct: 779 LRMLDEQGEVIPPAAFIGVAERFDLMQEIDRWVVARAIKEMGQQRRAGRDLVFEVNISGA 838 Query: 488 SLIRPRFQRWLRDTLMQCEKSQRKR------IIIELAEADVGQHISRLQPVIRLVNALGV 541 S P D L E+ R+ +++E+ E +I R Q + LG Sbjct: 839 STGDP-------DLLTIIERELRENEIDPINLVLEVTETTAVANIPRAQEFAARLAELGC 891 Query: 542 RVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVY 601 R A++ G S ++K L ++LK+ VR+ +QLL+++ VE G + Sbjct: 892 RFALDDFGAGFGSFYYLKHLPFDILKIDGEFVRSCTTSQTDQLLIRAAVEIARGMGKETI 951 Query: 602 ATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKK 639 A V + L GV QG PL+ + + Sbjct: 952 AEYVGDDETVELLRTLGVDYAQGFHLGRPAPLEQRLAR 989 >UniRef50_A0KLQ5 Diguanylate cyclase/phosphodiesterase domain 1 n=3 Tax=Aeromonadaceae RepID=A0KLQ5_AERHH Length = 641 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 95/428 (22%), Positives = 186/428 (43%), Gaps = 15/428 (3%) Query: 210 REQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNML 269 +EQ + L R D +GL NR +F Q+ + + G VM++ + +ML Sbjct: 224 KEQADEAEKL-RERVYVDAVSGLGNRAYFVGQVNAWIAE----AGQGGVMLVAV---DML 275 Query: 270 SDTW---GHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAG 326 D + G + + ++ L + + G+ LAR +++A L P L + + +A Sbjct: 276 DDLYREEGFAARDNMVKSIAQALKEQLKGWDGSALARISATEYALLCPTDDLAQLKDLAE 335 Query: 327 QLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYD 386 + + L N M + + IGI D ++ A++A A + + + + Sbjct: 336 VINSRIADLVVNPMGEGGALSVIGIAGRDGNDDLSALLTKADNALGKARNERRGA-VVME 394 Query: 387 DSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVH-HRELMCRIFDGNEEVSSA 445 + + G + WR L++ ++R R +PA + V H EL I + + Sbjct: 395 GGVDQGLMGRLAWRDLVQDAIARHLWRFKAQPACRFDNGVRLHAELFASISRDGTDYFAG 454 Query: 446 EYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQC 505 +++P + QF L E+D+ + IPLL+ + LA+ +T SL F+ WL L Sbjct: 455 QFLPAIEQFKLGGEFDQAILEASIPLLQQQADLVLAVNITAGSLCSDEFRAWLTGYLTDH 514 Query: 506 EKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVEL 565 + Q +R++ E+ EA + +H + +++ + G + V+ G S +++EL Sbjct: 515 AELQ-ERLLFEIPEAAIMKHKDHVTALVKALQEHGFQWGVDHYGRHFQSLGYLEELAPAY 573 Query: 566 LKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGD 625 +K+ G + + + + ++ A AT V + + + L + + G QG Sbjct: 574 VKVDHGYTSQVMEPGADTSFLAAVCRAAHNAGVTTIATRVEDQHQVELLAKLHIDGYQG- 632 Query: 626 FFASSQPL 633 F + PL Sbjct: 633 FVHPAFPL 640 >UniRef50_C6MWA0 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Geobacter sp. M18 RepID=C6MWA0_9DELT Length = 657 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 100/433 (23%), Positives = 183/433 (42%), Gaps = 17/433 (3%) Query: 211 EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLS 270 EQ SR + L + A QD TGL NR FF++Q+ L Q++ G+++++R+ L+ Sbjct: 225 EQASRAEGL-QERAYQDPVTGLGNRRFFESQVNAELGRQDE-DARGLLILLRIHGLEALN 282 Query: 271 DTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIK 330 G +E + LL + + Y L+R DF LP+ + E I ++ Sbjct: 283 QKRGLQAGDELLKRVATLLKSSLNAYADTALSRLTGGDFGIFLPNISPSEGGIIGTEIAA 342 Query: 331 AVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIY----- 385 + + K D++ H+GI + +++ A+ A +A +G NSW + Sbjct: 343 QLGRVAMEKTALDDNIGHLGIASCLGSITLTRLLAEADLALSSALQKGANSWELRVVTGD 402 Query: 386 DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREG---QVHHRELMCRIFDGNEEV 442 ++LP+ G W+ + + L L V G +V EL RI + + Sbjct: 403 SETLPQ---GQQHWKDALVKALEERRITL-DAQGVVENGPARKVLQLELFARIMQDGKPL 458 Query: 443 SSAEYMPMVLQFGLSEEYDRLQISRLIPL-LRYWPEENLAIQVTVESLIRPRFQRWLRDT 501 +A +MP+ + L DR+ I + + R + +AI ++ SL F+ WL + Sbjct: 459 DAALFMPVAERLKLVSAIDRIVIEEAMKVDFRSMAVDRVAINLSPSSLEDGAFRGWLF-S 517 Query: 502 LMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKEL 561 ++ + + E +E QH+ ++ V G + ++ G + +++ L Sbjct: 518 FLKGLPPEAPHVSFEFSEFAAVQHLQLIRDFGAAVRECGHGIGLDHYGRSFSKLGYLQSL 577 Query: 562 NVELLKLHPGLVRNIE-KRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVT 620 E +K+ + +++ V SL +V A GV S + L + + Sbjct: 578 RPEYVKIDRAYTGELSGGENDSRFYVASLCSVAHSIDIKVVAEGVESEEQAAVLKELNLD 637 Query: 621 GGQGDFFASSQPL 633 QG FF QPL Sbjct: 638 AMQGYFFGRPQPL 650 >UniRef50_A9L3T6 Diguanylate cyclase/phosphodiesterase n=12 Tax=Shewanella RepID=A9L3T6_SHEB9 Length = 739 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 111/449 (24%), Positives = 203/449 (45%), Gaps = 26/449 (5%) Query: 200 DTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVM 259 DTL+ ++ E++ RL + +A D TGL NRL F+ L LL + + V Sbjct: 276 DTLVMIAEDVSEKY-RLADELSFHANYDALTGLPNRLHFEALLENLLHAHDDMPI--CVA 332 Query: 260 MIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK 319 + L F ++++ GH Q ++ L ++R G ++AR +F L+ + + Sbjct: 333 FLDLDQFQVINNISGH-QAGDKLLCQVALRLKQLVR-KGDIVARLGGDEFGILMHYCNVD 390 Query: 320 EAESIAGQLIKAVDTLPNNKML----DRDDMIHIGICAW-RSGQDTEQVMEHAESATRNA 374 A+ IA ++ L N++ + + + +GI + D VM A++A R A Sbjct: 391 SAKQIAKRICT---QLANHEFIWEGRSHNVSVSMGIAKLDKKAADIYTVMSQADAACRLA 447 Query: 375 GLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQM--LSRGGPRLYQKPAV--TREGQVHHRE 430 QG N W +Y S P+ R ++ + L+ LY + V RE H E Sbjct: 448 KDQGRNGWHLYSASDPKMNRLYTEMMASVDIVGALALNQFELYFQSIVPLNREESGLHLE 507 Query: 431 LMCRIFDGNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPL----LRYWPEENL-AIQV 484 ++ R+ N VS A ++P ++ L+ + D I L+ L W + +L ++ + Sbjct: 508 ILLRMVQANGTIVSPAIFLPAAERYNLASKVDLWVIDNLLKWGGCHLDIWQQLDLVSVNL 567 Query: 485 TVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVA 544 + SL F WL LM E ++ IE+ E + + ++ ++ L ++A Sbjct: 568 SATSLGDFEFMNWLEMRLM-AEPELVDKLCIEITETAAVSQLDQATKLLDILRPLNCKLA 626 Query: 545 VNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATG 604 ++ G S +++K LNV+ +K+ V NI + + +Q +V+S+ + V A Sbjct: 627 LDDFGAGFSSFAYLKRLNVDFVKVDGQFVVNICEDSADQAIVKSICQLGQDMGFDVVAEF 686 Query: 605 VRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 V S+ + L GV QG +A ++P+ Sbjct: 687 VESQDIGRKLQTLGVDYAQG--YAINKPI 713 >UniRef50_B2V685 Diguanylate cyclase/phosphodiesterase n=3 Tax=Sulfurihydrogenibium RepID=B2V685_SULSY Length = 800 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 93/413 (22%), Positives = 192/413 (46%), Gaps = 28/413 (6%) Query: 235 RLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMM 294 R+F ++ L++ + ++M+ + DF ++DT+GH +E + +L + Sbjct: 395 RVFNRRKMMELIQKNIENSKKFAILMLDMDDFKRINDTFGHDLGDEILKEIVKILKN--I 452 Query: 295 RYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHI----G 350 R ++ RY +F L P KEA +IA + KA+ P ++ RD+ I+I G Sbjct: 453 RRQQDIIGRYGGEEFIILSPDADGKEALNIAEDIRKAISEKP---VVVRDNKIYISVSIG 509 Query: 351 ICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQML-- 407 I + G ++++ A+ A A +G N A+Y +PE+ + + + + Sbjct: 510 IAEFPIHGNSPSELLKAADIALYKAKKEGKNK-AVY--LIPEEVKKIISLEFEFKDAILD 566 Query: 408 ----SRGGPRLYQKPAVTREGQVHHRELMCRIFDG--NEEVSSAEYMPMVLQFGLSEEYD 461 R P +Q + G ++ E++ RI+D N+ + + +++ +++GL EE D Sbjct: 567 AIKNDRFVP-FFQPIVEAKTGNIYGYEVLARIYDEKENKYIPAYQFINNAIKYGLVEEID 625 Query: 462 RLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQ-CEKSQRK--RIIIELA 518 ++ + I +Y+ E+ L + + ++ + L C + K + +E+ Sbjct: 626 KIIQEKAI---KYFSEKKLNKCLFLNMSKNFIYKSGNLENLYNLCVSNGLKPENVYLEIT 682 Query: 519 EADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEK 578 E + ++ +I+ +LG R A++ G + ++K NV+++K+ LV NI + Sbjct: 683 EEEAILDFKNVKELIQYGKSLGFRYAIDDFGAGYSNFVYLKHFNVDIIKIDGSLVANIHQ 742 Query: 579 RTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQ 631 +NQ++V++++ + +V A V E LI+ GV QG F + Sbjct: 743 DLDNQIIVENIIRIAKHKNIKVLAEMVELEEEKDILIKLGVDYLQGYLFGKPE 795 >UniRef50_C8W213 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W213_DESAS Length = 1278 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 110/445 (24%), Positives = 198/445 (44%), Gaps = 20/445 (4%) Query: 198 ALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGI 257 A++T+ R+I R L L A+ D TG++NR + L ++ + G Sbjct: 833 AIETI-RDITERRNMEKELKYL----ASHDFLTGIHNRYSLEKCLEQAVKKVAE-GVKSA 886 Query: 258 VMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT 317 ++ I L +F +++DT GH+ ++ TL+ + +F+ G + R+ +FA LL + T Sbjct: 887 LLFIDLDNFKLVNDTLGHAAGDQLLKTLSATIGSFLQ--GGHRIFRFGGDEFAVLLENVT 944 Query: 318 LKEAESIAGQL---IKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNA 374 ++EA A L I+ + + I IGI D +++ +A+++ A Sbjct: 945 VEEAGMTAENLRLLIEEHEFCLTMYKTCFNMTISIGIVIIDGILDFHKILAYADNSLYKA 1004 Query: 375 GLQGGNSWAIY----DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV-TREGQVHHR 429 +GG + ++ DD N + LI+ L LY +P V ++G++ H Sbjct: 1005 K-EGGRNRVVFAQAGDDVTARMSETNHKI-ALIKTALKEDRFILYLQPVVRMKDGKITHH 1062 Query: 430 ELMCRIFDGNEEVSSAEYMPMVLQ-FGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVES 488 E + R+ N E+ S Y V + FGL + DR + + LL +P+ L I ++ S Sbjct: 1063 ETLIRMLGDNGEIISPNYFLTVAERFGLIAQIDRWVVQAAMKLLMEYPDLKLFINLSGVS 1122 Query: 489 LIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQA 548 + + ++ RI E+ E + I + + I + LG A++ Sbjct: 1123 MGDMSLLDAIEKDIIG-SNLDTSRIGFEITETSAMRDIRQAEEWIGRIKKLGCSFALDDF 1181 Query: 549 GLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSR 608 G+ S S++K L V+ LK+ V +I K + + LV S+ + A V ++ Sbjct: 1182 GVGFSSFSYLKILPVDYLKIDGTFVCDIYKDSTHAALVSSMNTIARTLGKKTIAEFVENQ 1241 Query: 609 SEWQTLIQRGVTGGQGDFFASSQPL 633 LI+ GV GQG + A P+ Sbjct: 1242 QIINMLIEIGVEYGQGFYLAEPSPV 1266 >UniRef50_A6VZ59 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinomonas RepID=A6VZ59_MARMS Length = 649 Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 88/434 (20%), Positives = 191/434 (44%), Gaps = 15/434 (3%) Query: 210 REQHSRLDTL--IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFN 267 +E S ++T +++ A +D +GL NR FF++Q+ + ++E+ G G+V+ I L D Sbjct: 221 KEFASEVETAQWLQAKAFKDPVSGLGNRHFFESQMKSHFAERER-GIDGLVL-ISLADLG 278 Query: 268 MLSDTWGHSQVEEQFFTLTNLLSTFMMRYPG-ALLARYHRSDFAALLPHRTLKEAESIAG 326 L++ G+ + + ++L+ + + LAR +DF L+P+ + + Sbjct: 279 KLNNERGYESADMFIQSAADILTKKVSTLSSFSTLARLSGADFVLLIPNFDHSQLTKVVD 338 Query: 327 QLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYD 386 ++ + L + + +IG + M A++A R A +G NS ++D Sbjct: 339 DIMSELMELNTAGISYSAAVANIGAVTIDGSVERSSAMSQADAALREAKREGSNSSKVFD 398 Query: 387 DSLPEK-GRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQ--VHHRELMCRIFDGNEEVS 443 ++ + W+ ++E + +L ++ T + + H E+ + +E Sbjct: 399 LNMGQDMAISKTAWKEILESAIRHKSFKLKKQKITTLDETPTILHEEVFMGLEHAGKEYH 458 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTV----ESLIRPRFQRWLR 499 + ++ + F L + D++ I R+I Y L + +TV S +P F WL Sbjct: 459 AGYFIGLAELFDLGSQIDQVIIGRVI---EYIKSRQLTVPLTVNLSASSYAKPAFITWLD 515 Query: 500 DTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIK 559 TL + +++ E++E V ++ + +++ V+ ++ G + +++ Sbjct: 516 KTLSNLNVDVKSKLMFEISEQSVLIEETQANELAQMLKTQRVQFGIDNVGKQFSAFQYLQ 575 Query: 560 ELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGV 619 L + +K+ R + + +L + + +V ATGV S +W L + V Sbjct: 576 TLMPDYVKVDSSYTRMAAGKESESFFMHTLCKMFGSLNIEVIATGVESEKQWIALKRFDV 635 Query: 620 TGGQGDFFASSQPL 633 +GGQG +Q + Sbjct: 636 SGGQGFLIGRAQDM 649 >UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D1W4_DEIDV Length = 856 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 125/518 (24%), Positives = 230/518 (44%), Gaps = 52/518 (10%) Query: 157 WLQ-RQLAGQELLETRATRILNGERGSNVLGT--IYEWPPRTSSA--LDTLLR--EIQNA 209 W Q R+LAG L + + + E G VLGT +YE S A +D L+R ++ Sbjct: 354 WAQFRELAGIHGLCSCMSLPVLDEHG-EVLGTFALYERSGAMSGAAHMDQLVRARDLAAL 412 Query: 210 REQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNML 269 +H +L +R A D TGL NR F +LA +LE E+ ++ + L +F + Sbjct: 413 AMRHHQLTAQLRHQAQHDALTGLPNRSLFTERLAEILEQSERSRASTALLFVDLDEFKGV 472 Query: 270 SDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLI 329 +DT GH + + + L R G ++AR +F +LP A ++A +++ Sbjct: 473 NDTVGHHVGDYVLQAVADRLLGCARR--GDVVARVGGDEFTLVLPFAEEPHAITVARRVL 530 Query: 330 KAVDTLPNNKMLDRDDMIHIGI-----CAWRSGQDTEQVMEHAESATRNAGLQGGNSWAI 384 + + + H+G + ++G+D + ++ HA+ A A + + +A+ Sbjct: 531 NEL----TRPFVVQGRAFHLGASIGISVSPQAGRDGQTLLRHADLAMYRAKREK-SGFAV 585 Query: 385 YDDSLPEKGRGNVRWRTLIEQMLSRGGPRL---YQKPAVTREGQVHHRELMCRIFDGN-E 440 ++ L ++ + ++ + + + L G L YQ +GQV E + R + Sbjct: 586 FEAQLNQQAQLRLQLASDLREALREPGANLELHYQPQVRLHDGQVVGAEALVRWRHPHLG 645 Query: 441 EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE----------------NLAIQV 484 VS A+++P+ G+ ++PL + EE +A+ V Sbjct: 646 MVSPAQFIPVAEDTGM-----------IVPLGTWVMEEACRQAVAWAAAGHGAMRVAVNV 694 Query: 485 TVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVA 544 + RP F + TL + + R+ +EL E+ V + + + + ALGV VA Sbjct: 695 SALQFARPDFVDTVSATL-RATGLEAGRLEVELTESAVMEDVKESVERMERLRALGVSVA 753 Query: 545 VNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATG 604 V+ G S S+++ L + +LK+ ++N+ ++ +VQ++V + + A G Sbjct: 754 VDDFGTGYSSLSYLQRLPLNVLKIDRTFIQNLGVNATSRSVVQAIVGLAQHLNLECVAEG 813 Query: 605 VRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 V + E + LI+ G QG FFA P ++ SQ Sbjct: 814 VETPDEREALIEVGCRYAQGFFFAKPLPAPALLEWLSQ 851 >UniRef50_Q67NQ9 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67NQ9_SYMTH Length = 720 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 107/444 (24%), Positives = 189/444 (42%), Gaps = 26/444 (5%) Query: 205 EIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLP 264 ++Q+ ++ + L+R A D T L NR F +L + + E+ G G ++ I L Sbjct: 277 QLQDITDRKRYEEELVR-LAMVDSLTDLANRRRFQQELEEAVTEAERTGRSGALVFIDLD 335 Query: 265 DFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESI 324 F ++DT GH +E + +L + + PG AR +FA +L + A + Sbjct: 336 MFKHINDTLGHPAGDEVLRQVATILRSAI--RPGDTAARLGGDEFALVLRNADGARAAQV 393 Query: 325 AGQLIKAVDTLP-NNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSW 382 A +L+ A+ +G+ + G+ ++M A+ A A G +SW Sbjct: 394 ADRLLTAIRRARFGGAEAPVSLTASMGVVLFPEHGRSVRELMNRADMALLEAKEGGRDSW 453 Query: 383 AIYDDSLPEKGR------GNVRWRTLIEQMLSRGGPRLYQKPAVT--REGQVHHRELMCR 434 A + PE GR + WR I + L L+ +P + R H L+ Sbjct: 454 APF---TPE-GRWQREMQAQLLWRQRISRALEEDRFVLHYQPILDLRRNAVTRHEALLRM 509 Query: 435 IFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISR----LIPLLRYWPEENLAIQVTVESLI 490 + DG E + E+M + +F L ++ DR + R L L R L + ++ +L+ Sbjct: 510 VGDGGELIFPGEFMAVAERFDLIQQVDRWVLERAVRELAELQRAGRRTVLEVNLSGRTLM 569 Query: 491 RPRFQRWLRD--TLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQA 548 P +R TL + + +++E+ E + + + I + ALG R+A++ Sbjct: 570 DPVLPAVIRRGLTLRDVDPAS---LVLEITETAAISDVDQAERFIGEMKALGCRLALDDV 626 Query: 549 GLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSR 608 G S ++K L V+ +K+ +RN+ T +Q LV++L C Q A V S Sbjct: 627 GAGFASLYFLKRLPVDYIKIDGAFIRNLPHDTADQHLVRALASVCRELGKQTVAEFVDSP 686 Query: 609 SEWQTLIQRGVTGGQGDFFASSQP 632 Q + + G+ QG P Sbjct: 687 KTLQVVREYGIDYAQGYLIGRPGP 710 >UniRef50_C8QYF1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYF1_9DELT Length = 711 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 133/532 (25%), Positives = 229/532 (43%), Gaps = 69/532 (12%) Query: 122 VYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAV-----RWLQRQLAGQELLETRATRIL 176 V+QD + Y + L T +GA I+ L A+ RWL R Sbjct: 225 VFQDTLPTYNYLLNRTMDSSGAA--ILDQLLKALQAENQRWLNR---------------- 266 Query: 177 NGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHS--RLDTLIRSYAAQDVKTGLNN 234 N+L I+ S L LL ++ RE + R+ + A +D TGL N Sbjct: 267 -----LNLLSYIFFAAFLASVGLIILLL-VKTERENQALNRMSQALHRAATRDQLTGLAN 320 Query: 235 RLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMM 294 R FD+ DQ + H ++++I + DF ++D +G V + LT L + Sbjct: 321 RFAFDS-------DQGRC-RHPLLLLINIDDFKHVNDLYG---VRAGDYVLTELAAILRR 369 Query: 295 RYPGALLARYHR---SDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIG 350 + P R +R DF LL T + +S+A Q++ AVD N RD I I Sbjct: 370 QLPAQPWGRCYRLGGDDFGLLLDEADTTVQPQSLAQQVLAAVDQSEFNY---RDQPIRIN 426 Query: 351 ICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDD--SLPEKGRGNVRWRTLIEQMLS 408 + S ++E A+ A S+ IY + +L E+ N++ + LS Sbjct: 427 VSIGIS--RLRPLLETADLALNEVKKLRRGSFLIYQEELNLQERIADNLQVLENARRALS 484 Query: 409 RGGPRLYQKPAV-TREGQVHHRELMCRIFDGNEEV-SSAEYMPMVLQFGLSEEYDRLQIS 466 +Y +P V R G++ E + R+ + + +V S ++ +V + L E+ R + Sbjct: 485 NDDVLVYYQPIVDNRTGKIVKFESLVRLRNPDGQVLSPVMFLDVVKESSLYPEFTRRMVD 544 Query: 467 RLIPLL---RYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQ---RKRIIIELAEA 520 + L RY NL+I VE + ++D +M K+ +R+ E+ E+ Sbjct: 545 KTFADLADCRYGFSLNLSIADIVE--------QEVQDFIMAKIKAHPEIARRLTFEILES 596 Query: 521 DVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRT 580 + ++I+ +Q I V A G ++A++ G + + I + V+ +K+ L+RNI + Sbjct: 597 EGVENIALVQSFIERVKAAGCQIAIDDFGSGYSNFAHILQFKVDSIKIDATLIRNIHQDQ 656 Query: 581 ENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQP 632 + Q+LV+++V+ C A V S Q + + G+ QG F P Sbjct: 657 QAQVLVRTIVDFCRQLGINTVAEFVHSEEVLQVVKELGIDYSQGYFLGKPAP 708 >UniRef50_A1SWS3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SWS3_PSYIN Length = 623 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 99/439 (22%), Positives = 183/439 (41%), Gaps = 8/439 (1%) Query: 194 RTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVG 253 + S+ L+ QN + + A D TG+NNR F L +L E Sbjct: 175 KVSALLNAQKESFQNKLNKQEEKIAGLTQQATTDNLTGVNNRSSFRKTLTEIL-SAESGQ 233 Query: 254 THGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL 313 H I+ +IR + ++ G Q + LT ++ + + R SDFA + Sbjct: 234 KHAILSIIRASELLAINSQQGFMQGDLYLENLTEIIRKVTYPHKNISIYRISGSDFALIA 293 Query: 314 PHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRN 373 ++ EA+ IA L D LD + + GI +++SGQ EQV+ + A Sbjct: 294 LGMSVSEAQRIAQDLKVLFDQYQAQHKLD--SIAYNGISSFQSGQKPEQVLARTDLALAK 351 Query: 374 AGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPA-VTREGQVHHRELM 432 A +G NSW + + G +WR +IE ++++ L +P + V + E+ Sbjct: 352 AQTEGVNSWVFQQSNDNDNQFGQQQWRVVIENIIAKKSVILLHQPVLILPTDMVGYEEIF 411 Query: 433 CRIFDGNEEVSSAE-YMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN--LAIQVTVESL 489 R + V+ AE M + + + ++ I +I R ++ I ++ ++ Sbjct: 412 TRFVSDDGHVTPAETVFAMAQRVDMIIKLEQFIIGEVINQCRRKSDQKSRWGINISSSAM 471 Query: 490 IRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAG 549 F WL L++ K + E+ E + ++ + V ++ G R A++ G Sbjct: 472 QNSSFIVWLERLLLRDPKV-AALLTFEMQEELLDSNLVSSKRVFDMLRRTGTRSAISNFG 530 Query: 550 LTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRS 609 + S ++ L +L+K+ L+ NIE + NQ ++ +++ + A GV + Sbjct: 531 KGIGSFGLLRTLKPDLVKIDSSLINNIELDSANQQFIRMIIDVAHRMDCTIIAEGVEHLA 590 Query: 610 EWQTLIQRGVTGGQGDFFA 628 + Q L + G QG A Sbjct: 591 QKQILETMHIDGIQGFLIA 609 >UniRef50_B8GSV3 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=2 Tax=Thioalkalivibrio RepID=B8GSV3_THISH Length = 806 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 113/451 (25%), Positives = 200/451 (44%), Gaps = 34/451 (7%) Query: 202 LLREIQNAREQHSRLDTLIRSYAA-QDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 + R++ ARE +L S+AA D TGL NR F+ +L L+ + G V+ Sbjct: 351 VFRDVTQAREMARKL-----SWAATHDSLTGLVNRAEFERRLDLLVTTARQEGRGHAVLF 405 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGAL-----LARYHRSDFAALLPH 315 + L F +++DT GH+ +E LL R G L LAR +F LL Sbjct: 406 MDLDQFKLVNDTCGHAAGDE-------LLRQLTRRLQGQLRDNDTLARLGGDEFGVLLEG 458 Query: 316 RTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQD-----TEQVMEHAESA 370 ++ A IA + ++A T+ + ++ + +G+C + D +M A++A Sbjct: 459 CPMERAGQIA-ETLRA--TVAEFRFQWQEKIYTVGVCIGVAPIDEHIKSVASLMSDADAA 515 Query: 371 TRNAGLQGGNSWAI--YDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREG-QVH 427 A QG N I + D + +G + W I + L R LY + V G + Sbjct: 516 CYLAKEQGRNRIHIIQHGDQALSRRQGEMSWVQRINEALERDRFCLYHQHIVPVSGNEPP 575 Query: 428 HRELMCRIFDGNEEV-SSAEYMPMVLQFGLSEEYDRLQISRLIPLLRY---WPEENLAIQ 483 H E++ R+ D + + + ++P ++GL DR I+R++ LR P AI Sbjct: 576 HTEVLVRMLDEDGAIIAPMAFIPAAERYGLMPAIDRWVIARVLNHLRIPGPRPHGLYAIN 635 Query: 484 VTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRV 543 ++ +SL + ++ D L + + R+ E+ E ++++ + + + LG R Sbjct: 636 LSGQSLCDNQMLDFILDMLART-GVEPGRVCFEITETTAIANLTQAERFMSALRNLGCRF 694 Query: 544 AVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYAT 603 A++ G + S ++K+L V+ LK+ VR++ + N+ +V+S+ Q A Sbjct: 695 ALDDFGTGMSSFGYLKQLKVDFLKIDGSFVRDMNEDPINRAMVESINHIGHIMGIQTIAE 754 Query: 604 GVRSRSEWQTLIQRGVTGGQGDFFASSQPLD 634 V + L GV GQG PL+ Sbjct: 755 CVAHEAVMDHLKAIGVNYGQGFGLHMPAPLE 785 >UniRef50_C5BTR2 PAS sensor diguanylate cyclase/phophodiesterase n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BTR2_TERTT Length = 1416 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 118/496 (23%), Positives = 221/496 (44%), Gaps = 28/496 (5%) Query: 156 RWLQRQLAGQE--LLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQH 213 +++QR L E ++E I G +N + + P + S + + +++ E+H Sbjct: 913 QFVQRCLQSNESFVVENNPLLIHTGSETANYI-ELSIVPLQLSDDVRGCIITLRDTSERH 971 Query: 214 SRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTW 273 +L+ L + + D TGL NR + +L + + G ++ + L F +++DT Sbjct: 972 RQLERL-KWQSTHDSLTGLVNREEMEKRLERAIATSRREGIESSLLYMDLDQFKVINDTC 1030 Query: 274 GHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVD 333 GH ++ L L+ M+R AR +FA LL H + EAE+IA ++ + V Sbjct: 1031 GHLAGDQLLKQLAQLIRD-MLRTRDT-FARLGGDEFAILLDHCPILEAEAIAQKIKQKV- 1087 Query: 334 TLPNNKMLDRDDMIHIGICAWRSG-----QDTEQVMEHAESATRNAGLQGGNSWAIY--D 386 + + D +G+ G QV+ A++A A G N I+ D Sbjct: 1088 --CDYRFAWEDKAFRVGVSIGIVGIHPSVSQLSQVLSDADAACYAAKEAGRNCIQIHTQD 1145 Query: 387 DSLPEKGRGNVRWRTLIEQMLSRGGPRLY-QKPAVTREGQVHHRELMCRIFDGNEE-VSS 444 + + E R +R + I Q + RLY Q+ G + E++ R+F+ E + Sbjct: 1146 NKVLEAQRLQMRSISDINQAIESDHFRLYFQQIHAVGSGAIQSWEILIRMFNATGEFLLP 1205 Query: 445 AEYMPMVLQFGLSEEYDR-LQISRLIPLLRYWPEEN------LAIQVTVESLIRPRFQRW 497 + ++P +FGL D + S L + +Y+ + L+ V+ ++ P + Sbjct: 1206 SHFLPAAERFGLINRIDTWVMESALRNVAQYFGQGKERDFPLLSFNVSGATISDPAYLDL 1265 Query: 498 LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 + + + + K I E+ E V +++ + +R LG ++A++ G L S S+ Sbjct: 1266 VSELFTRYQYPANK-ISFEITETSVVRNLVKASEFMRRARELGCKLALDDFGTGLSSLSY 1324 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 + EL V+ +K+ V+NI N+ +V S+ E +V A GV + ++ L + Sbjct: 1325 LGELPVDRVKIDMSFVKNIVDNPVNRAIVNSVKEVAHLLKLEVVAEGVETPAQLACLREL 1384 Query: 618 GVTGGQGDFFASSQPL 633 GV QG F + +PL Sbjct: 1385 GVDAYQG--FLAGKPL 1398 >UniRef50_A1SX34 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SX34_PSYIN Length = 799 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 98/430 (22%), Positives = 192/430 (44%), Gaps = 28/430 (6%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A+ D TGL NR FD L + E G ++ I L F +++D+ GH + Sbjct: 361 ASHDHLTGLANRREFDRMLLEMFESSISPGVAHVLCCIDLDQFKLINDSCGHFAGD---- 416 Query: 284 TLTNLLSTFMMRYPGA--LLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKML 341 TL +S + + A L+AR +FA L L+ A+ IA + D + + Sbjct: 417 TLLKEISVVLTQTVRAKDLVARIGGDEFAILFQSSDLQAAKQIAQDV---CDKIAQIRFH 473 Query: 342 DRDDMIHIGICA--------WRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKG 393 +D H+G W + + +Q E A A ++ G + + D ++ E+ Sbjct: 474 HKDKFYHVGASIGVVPLDGRWDNAEAAQQAGEIACFAAKHEGRGRVHMYTDLDKTVMEQ- 532 Query: 394 RGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVH---HRELMCRIFD-GNEEVSSAEYMP 449 R ++W + ++Q + L+ +P + + Q H E++ R+ + G VS A +M Sbjct: 533 RDQMQWASRLQQAIDENRFELFAQPIMALDEQAEQGLHFEVLLRLRETGGALVSPAVFMA 592 Query: 450 MVLQFGLSEEYDRLQISRLIPLLRYWPEE-----NLAIQVTVESLIRPRFQRWLRDTLMQ 504 QFGL+ + D ++ ++ ++ +E +A+ ++ S+ F ++L + L Sbjct: 593 SAEQFGLATQIDHWVVNNVLKWMKTHADELEKVHIIAVNLSGNSVGDRDFHQFLIEALDH 652 Query: 505 CEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVE 564 + +K I E+ E +++ I +V+ G +++++ G + S +++K+L V+ Sbjct: 653 AQVPVQK-ISFEITETAAIENLDIATEFIAMVHQRGAKISLDDFGSGMSSMAYLKKLPVD 711 Query: 565 LLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 LK+ V+++E T + +V+S+ + T A V + L GV QG Sbjct: 712 YLKIDGQFVKDMENDTVDCAMVRSIKQIADLTGKITIAEFVENAKILMLLKDIGVDFAQG 771 Query: 625 DFFASSQPLD 634 QP++ Sbjct: 772 YHIGKPQPIN 781 >UniRef50_B4X4M1 PAS fold family n=2 Tax=Alcanivorax RepID=B4X4M1_9GAMM Length = 864 Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 107/446 (23%), Positives = 193/446 (43%), Gaps = 26/446 (5%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 + R++ + R +L R +A D TGL NR F+N L L+ E H ++ I Sbjct: 407 VFRDVTSRRAMQKKL----RYHATHDALTGLTNRREFENTLQESLD--EPGAEHSMLCFI 460 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA 321 L F +++DT GH + ++ + G ++AR +F LL H + A Sbjct: 461 DLDRFKVVNDTAGHVAGDALLRECARVIGRQVRE--GDVVARLGGDEFGLLLRHCPAQRA 518 Query: 322 ESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDT-----EQVMEHAESATRNAGL 376 IA +LI A L + + ++ + IG A D E+ M A+ A A Sbjct: 519 IQIAERLIGA---LGDIRFAWKESLYDIGASAGLVQLDANVITVEEAMSRADVACYAAKH 575 Query: 377 QGGNSWAIY--DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKP--AVTREGQVHHRELM 432 +G N ++Y DDS + ++ + + L LY + + + H E++ Sbjct: 576 RGRNRVSVYTPDDSEASRRHLELQMAAGLRESLESNRFLLYAQEIRPIDASTEPSHYEVL 635 Query: 433 CRIFDGNEEV-SSAEYMPMVLQFGLSEEYDRLQISRLI----PLLRYWPEENLAIQVTVE 487 R+ D N ++ + ++P ++ + DR +++L+ L P+ N+AI ++ Sbjct: 636 LRLRDRNGDILNPGSFIPAAERYQMMPHIDRWVLTQLLVSLSDELAALPQLNIAINLSAT 695 Query: 488 SLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQ 547 SL P F +L L + S +R+ E+ E V +S ++ + G +VA++ Sbjct: 696 SLDDPTFMPFLESLLSKTSLSP-ERLTFEITETTVVNQLSSASDLLGRIREQGCKVALDD 754 Query: 548 AGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRS 607 G S S++K V+ +K+ VRN+ + ++ +V+S+ E + A V Sbjct: 755 FGSGFSSFSYLKHFPVDFIKIDGSFVRNLLHSSVDRTIVESINEVAHRLGVKTVAEYVEE 814 Query: 608 RSEWQTLIQRGVTGGQGDFFASSQPL 633 + L + GV QG QPL Sbjct: 815 HALIGVLEEAGVDFVQGYAIGRPQPL 840 >UniRef50_C8R1Y2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R1Y2_9DELT Length = 603 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 105/442 (23%), Positives = 189/442 (42%), Gaps = 19/442 (4%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 L +E+ R +RL + D TGL NR + L L + G ++ + Sbjct: 150 LEKELAERRVMEARL----KHRVGHDELTGLPNRSQLEGALELALIRAQNFQRSGALLYL 205 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA 321 + F +L+DT GH ++ + +L ++ P L R +FA LL + T ++ Sbjct: 206 DVDHFKLLNDTEGHESGDKLLTGVAGVLRRRVL--PRHLAVRIGGDEFAVLLENTTTEDV 263 Query: 322 ESIAGQLIKAVDTLPNNKMLDRDDM-IHIGICAWRSGQDTE--QVMEHAESATRNAGLQG 378 +A +L + + L ++ IG+ G+ + +++ A+ A A +G Sbjct: 264 LKLAEELRELLHEYRFEGCLGCYNLGASIGVALMSPGESLQAGELLSRADQACHVAKRRG 323 Query: 379 GNSWAIYDDSLPE--KGRGNVRWRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCRI 435 N YD PE + + W ++ Q L G L +P V R+G H E + R+ Sbjct: 324 RNRVHCYDPEDPEVVGLKRDATWVPMLRQALRNGSFALEFQPIVRARDGACCHYEALIRL 383 Query: 436 FDGNEEVSSAEYMPMVLQFGLSEEYD----RLQISRL--IPLLRYWPEENLAIQVTVESL 489 + + S E++P + GL + D + RL +PL L+I ++ +L Sbjct: 384 LENGKMYSPGEFIPSAERMGLIHQLDLWVVEAAVDRLAAMPLTEGQEPIRLSINLSAYAL 443 Query: 490 IRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAG 549 P L L S R R++ E+ E + + + ++ + +LG R A++ G Sbjct: 444 RNPVLMPLLERKLEMTGLSPR-RLMFEITETTAVTQLKQARELVERMRSLGCRFALDDFG 502 Query: 550 LTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRS 609 + +++K V++LK+ V N+ K ++LLV+S+VE QV A V + Sbjct: 503 SGFSTFNYLKHFPVDMLKIDGSFVVNMLKNPTDELLVRSMVELAHSLDKQVIAEFVEDEA 562 Query: 610 EWQTLIQRGVTGGQGDFFASSQ 631 + L + GV QG + Q Sbjct: 563 TARRLREIGVDYLQGFYLGRPQ 584 >UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60BD0_METCA Length = 1214 Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 100/446 (22%), Positives = 193/446 (43%), Gaps = 24/446 (5%) Query: 215 RLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWG 274 R + IR A D TGL NR +L ++ + GT+G ++ + L F L+D+ G Sbjct: 772 RTEEKIRQLAYYDSLTGLPNRSLIFERLTQQMKAARREGTYGALLFMDLDYFKTLNDSLG 831 Query: 275 HSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL----PHRTLKEAESIA-GQLI 329 H + + L + A AR +F LL P ++ ++I + + Sbjct: 832 HHMGDRLLVQVAERLKNCLEDEEAA--ARLGGDEFVVLLAPAKPSASVAAGQAIVHARRV 889 Query: 330 KAVDTLPNNKMLDRDDMIH-----IGICAWRSGQDT-EQVMEHAESATRNAGLQGGNSWA 383 + + + P DD +H IGI + G +T E V++ A++A A +G + Sbjct: 890 RELLSAP----FQLDDYVHYISVSIGIALFPDGANTAEDVLKQADTAMYVAKNEGRDGVR 945 Query: 384 IYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNE-EV 442 Y+ ++ RG + + + L+ +Y +P + +G+V E + R F + Sbjct: 946 FYESAMEAVVRGRLELEKALRKALANDEFEVYYQPQMLGDGRVVGAEALIRWFHPERGAI 1005 Query: 443 SSAEYMPMVLQFGLSEEYDRLQISRLIPLL-----RYWPEENLAIQVTVESLIRPRFQRW 497 S +++P+ Q G+ + + R L R L++ V+ +R Sbjct: 1006 SPDQFIPVCEQNGMILRVGAIVLRRACACLAEIRARGLALPKLSVNVSPRQFMRSDLMTQ 1065 Query: 498 LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 L ++ S + +EL E + H I + LGV +++ G S ++ Sbjct: 1066 LEQFCLENGVSPTD-LCLELTEGVLLNHTELAVAQIGRLKNLGVSFSIDDFGTGYSSLAY 1124 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 +K L ++ LK+ VR++E+ + + +V+++V V A GV +R++ + L + Sbjct: 1125 LKHLPLDDLKIASAFVRDLEQDSSDAAIVETIVSMARHLGLDVIAEGVETRTQVEILERY 1184 Query: 618 GVTGGQGDFFASSQPLDTNVKKYSQR 643 G QG++FA P D ++ ++R Sbjct: 1185 GCHRFQGNYFARPLPKDDFIRFVAER 1210 >UniRef50_Q2C9G6 Putative uncharacterized protein n=2 Tax=Photobacterium RepID=Q2C9G6_9GAMM Length = 636 Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 90/409 (22%), Positives = 172/409 (42%), Gaps = 14/409 (3%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 +R A D +GL NR FF +Q+++ L++ K G ++ + DF ++ Sbjct: 226 LREQAYLDPISGLGNRSFFIHQISSWLDESHKGGL-ALIQTTLISDFYEKEGYQAGDKLI 284 Query: 280 EQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNK 339 +Q N ++ Y +AR R +FA L+P+ + ++ E + +++ D + NN Sbjct: 285 KQIAARLN----DVISYNYTTIARLSRDEFAILIPNLSSEKLELLGKMVLEIFDDIVNNS 340 Query: 340 MLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRW 399 L IG+ + Q++ ++A A L S A+ D G +W Sbjct: 341 KLVSPSTTDIGLVYNEAKITPSQLLTQLDNALTQAKLTPHKSIALIKDPNSHSSLGKQQW 400 Query: 400 RTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEE 459 + L+EQ ++ + +PA V+H E+ I S+ +++ + + Sbjct: 401 KQLLEQAINEDLFQYKFQPATLENKSVYHYEVFTAIQKNKNFYSAGQFLGAIEDLKIGSW 460 Query: 460 YDRLQISRLIPLLR----YWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIII 515 +DR I ++ L P AI +T S+ P F RWL D L+ R+ Sbjct: 461 FDRHVIVTIVNRLNADRTIGP---FAINITNSSIGDPSFTRWL-DRLLSNNTQIASRLFF 516 Query: 516 ELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRN 575 EL E ++ + ++ V ++ G S +++KE N + +K+ Sbjct: 517 ELQEISCIRNTDATSLLCSIIKRYHFGVGIDNYGRHFQSLNYLKETNPDYVKIDYAYTYQ 576 Query: 576 IEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 + +T++ +L S+ +V AT V + ++ + L V+G QG Sbjct: 577 LNDQTKSAVL-SSICRTAHSLDIKVIATRVETETQLERLSDLFVSGYQG 624 >UniRef50_C1SKJ1 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SKJ1_9BACT Length = 647 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 103/452 (22%), Positives = 192/452 (42%), Gaps = 15/452 (3%) Query: 193 PRTSSALDTLLREIQNAREQHSRLDTLIRSYAA---QDVKTGLNNRLFFDNQLATLLEDQ 249 P + T+ + A+ ++R +++Y +D TGL NR +F +QL+ L+ Sbjct: 201 PEMKQVVITMNSMVSKAQAIYNREIETLKNYQELLYKDQSTGLFNRKYFVSQLSAYLQ-A 259 Query: 250 EKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDF 309 E + G V+++ + GHS + + F + + + + P ++ A + +F Sbjct: 260 ENENSSGEVVILSFEGMEDAAAEAGHSVISKLFSFCVDEMQSISGKVPNSVPACLNNREF 319 Query: 310 AALLPHRTLKEAESIAGQLIKAVDTLPN--NKMLDRDDMIHI--GICAWRSGQDTEQVME 365 A +LP EA +A A D + N + + D++ + G ++R +D +V+ Sbjct: 320 ALILPGCDTAEALVMAKT---ATDNINNYIKSIEEIKDILGVFCGAASYRYDEDMGKVLS 376 Query: 366 HAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQ 425 + A A + + Y D G + W+ +IE L L +P V+ G+ Sbjct: 377 KVDYAVTLAKSKESGAVERYVDDGSHIVLGKMEWKHMIETALGEDRFILTSQPVVSDGGE 436 Query: 426 VHHRELMCRIFDGNEEVSSAEY-MPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQV 484 +H +E+ + D + +V A + MPMV+ L+ DR + + + L E LAI + Sbjct: 437 LH-QEIYVNMVDSDGKVQRAGFFMPMVISLNLANSLDRYVLEKTVDYLTGNKEHTLAINI 495 Query: 485 TVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVA 544 T L W R L+ K R+R+ E++++ + H+ L+ LG Sbjct: 496 TDMFLNDRGAFSWFRKLLVSA-KHLRERLTFEISDSAIKHHLDICLDFSGLIKGLGFTFG 554 Query: 545 VNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATG 604 V++ ++ S +++L + LK+ + N E L +SL ++ AT Sbjct: 555 VDRFAMSQESLENLQQLKPDYLKVDYDYLINSEDGDVAAAL-KSLQTITDSLGIKLIATK 613 Query: 605 VRSRSEWQTLIQRGVTGGQGDFFASSQPLDTN 636 + S Q L + QG A PL N Sbjct: 614 IDSEELRQKLEDNNIKYFQGRGVAGINPLGKN 645 >UniRef50_A3IWQ8 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) (Fragment) n=2 Tax=Cyanothece RepID=A3IWQ8_9CHRO Length = 822 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 103/397 (25%), Positives = 175/397 (44%), Gaps = 24/397 (6%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 Q S+L + A+ D TGL NR + QL+ +E + I+ + L F +++D Sbjct: 430 QASQLAHQLSWEASHDNLTGLANRRELEKQLSLAIESYKNEDVEHILCYLDLDQFKIIND 489 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAG---QL 328 T GH +E +TNLL T + +LAR +FA LL +L +A++IA QL Sbjct: 490 TCGHVAGDELLKQVTNLLQTRVR--SSDILARLGGDEFALLLKGCSLGKAKTIANNLRQL 547 Query: 329 IKAVDTLPNNKMLDRDDMIHIGICAWRSG-QDTEQVMEHAESATRNAGLQGGNSWAIYDD 387 +K +N++ + IGI + Q V+ A+SA A +G N +Y + Sbjct: 548 VKNFRFTWDNEIFSVG--VSIGIVSINQEIQTITSVINAADSACYTAKSRGRNCVYVYKE 605 Query: 388 SLPE--KGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREG--QVHHRELMCRIFDGNEEVS 443 S E K G +W + Q L LY + V+ + +VHH L+ + D VS Sbjct: 606 SDDEATKKIGQNQWIIRLNQALDENLFHLYSQKIVSIQSTEKVHHEVLLRLLDDSGNLVS 665 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLR--YWPEENL---------AIQVTVESLIRP 492 + P ++ L EE D+ IS + + Y + NL I ++ S+ Sbjct: 666 PLAFFPSAERYNLMEEIDQWVISNFLKVYSEAYQKQSNLKKANFNHVHTINLSAISVKND 725 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 + ++ + L K + E+ E ++S+ +I + LG A++ G + Sbjct: 726 QLCNFIEEKL-SYYNVNPKHLCFEITETTAITNLSQTIKLIEGIKQLGCYFAIDDFGSGM 784 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSL 589 S S++K L V+ LK+ V+++ + N LV Sbjct: 785 SSLSYLKNLPVDYLKIDGNFVKHLADDSLNHCLVDCF 821 >UniRef50_C6W9U5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Actinomycetales RepID=C6W9U5_ACTMD Length = 673 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 115/460 (25%), Positives = 185/460 (40%), Gaps = 17/460 (3%) Query: 179 ERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFF 238 ER G + P T + +I +R H L L A QD TGL NR Sbjct: 199 ERWFECFGEVVTDPDGTPQRVLGTAHDITQSRRVHDELLAL----AEQDPLTGLANRRAV 254 Query: 239 DNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPG 298 +L E + G G ++++ L +F ++D GH+ + L L T + P Sbjct: 255 TREL----ERRLATGGTGSLLLLDLDNFKDVNDLRGHAVGDRLMRALAAALRTRL--EPE 308 Query: 299 ALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQ 358 L+ R +FA +LP +A +A L + LP R I G+ + + Sbjct: 309 HLIGRLGGDEFAVVLPDTGPADAARVAEHLRDTIARLPLATPATR-TTISTGVAGYGTSG 367 Query: 359 DT-EQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQK 417 DT E V+ +A+ A + G N +Y+ V + L GG L+ Sbjct: 368 DTWELVLANADLALYASKAAGRNRVTVYEPGHYADTAKRVSVLDRLRGALDGGGLALHAM 427 Query: 418 PAVT-REGQVHHRELMCRIFDGNE-EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW 475 P V G+V EL+ R+ DG E + A+++P + L E DR ++ I L Sbjct: 428 PMVRLATGRVLGHELLLRLEDGQEPRLGPADFLPEAERTNLVHEIDRWVLATAIDTLVRH 487 Query: 476 PEENLAIQVTVE--SLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVI 533 P+ L V V +L P F ++ D L + R+ IE+ E ++ + + Sbjct: 488 PDPELRFNVNVSGRTLEDPEFGGFVLDRLAGAGVAP-GRLGIEITETAAVTNLDAARTLA 546 Query: 534 RLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEAC 593 + G R+ ++ G S +K L + +K+ VR I++R + +LV ++ Sbjct: 547 HQLRGHGCRIVLDDFGSGFGSFVHLKHLPITGIKIDGEFVRGIDERGPDAVLVSGIMRIA 606 Query: 594 SGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 G A V + +TL GV GQG PL Sbjct: 607 QGLGLSAVAEWVERPEQVRTLTSLGVRVGQGFHLGGPVPL 646 >UniRef50_UPI0001C31379 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31379 Length = 587 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 107/433 (24%), Positives = 181/433 (41%), Gaps = 14/433 (3%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + R++ ++ A D TGL NR F+ +L + + G G V+++ + F ++D Sbjct: 146 ERKRVEAHLQHMADHDPLTGLLNRRRFEQELERHVAHVRRYGPEGAVLVVDVDRFKQVND 205 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKA 331 +GH+ + ++ +L + +AR +FA LLP EAE +A +L++A Sbjct: 206 AYGHTAGDRVIASVARVLHRRLRSTD--TVARIGGDEFAVLLPKADRAEAEIVARRLVEA 263 Query: 332 VDTLPNNKMLDRDDM-IHIG--ICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDS 388 V + +R + I +G + RS E + A+ A +A GG+ +A ++ Sbjct: 264 VRAQADPGDGERTHVTISVGATVLDERSELSAEAAVVDADLAMYDAKDSGGDGFAFFEAD 323 Query: 389 LPEKGRGNVR--WRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCRIFDGNEE-VSS 444 + + R R WR I L+ L +P V G V EL+ R+ + + + Sbjct: 324 VHARSRSRARTTWRDRIVDALAHDRFALVAQPVVDATSGVVVQHELLLRLTGSHGDLIPP 383 Query: 445 AEYMPMVLQFGLSEEYD----RLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRD 500 A ++ + + GL D R I L L R L + V+ SL + Sbjct: 384 AAFLSIAERDGLIVAIDSWVARRAIGLLAELERSGTATPLEVNVSGRSLADTDLLAAIAG 443 Query: 501 TLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKE 560 L + R ++ E+ E I + + V ALG R A++ G L S ++K Sbjct: 444 ELRRTGVDPRN-LVFEIPETAAVADIQLARAFAQQVRALGCRFAIDDFGAGLGSLYYLKH 502 Query: 561 LNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVT 620 L ++LKL LV + ++L+++S V G A V L GV Sbjct: 503 LPFDMLKLDGELVEQCSRTVADRLVIESAVNVAHGLGAVAIAEQVGDAETHALLTGLGVD 562 Query: 621 GGQGDFFASSQPL 633 QG A QPL Sbjct: 563 LIQGHHIAMPQPL 575 >UniRef50_A8UVA1 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UVA1_9AQUI Length = 711 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 106/460 (23%), Positives = 202/460 (43%), Gaps = 31/460 (6%) Query: 178 GERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLF 237 GER S L + + P S L + A E+++R I YA +D TGL N+ Sbjct: 260 GERDSARLKVVEGFLPALMSVLGS-----AKALEEYARN---IEYYATRDPLTGLYNQRV 311 Query: 238 FDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYP 297 F L +E ++ G V+MI L +F +++DT+GH ++ L+ R Sbjct: 312 FWELLEYEIERAQRRGYSFAVLMIDLDNFKVINDTYGHDFGDKFLREFAKLMRKTFRRED 371 Query: 298 GALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTL----PNNKMLDRDDMIHIGICA 353 ++ARY +F +LP+ + +EA A + I+ +D P+ K + + IGI Sbjct: 372 --IVARYGGDEFVVILPYASEEEALRSARRFIEELDNFYVEAPDGKPIKA--TVSIGIAL 427 Query: 354 W-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDD-----SLPEKGRGNVRWRTLIEQML 407 + + G+ T+++ A++ A +G + + D + +G+ + +E+ L Sbjct: 428 YPQHGESTQELFLTADNIMYRAKAEGKSRVMLPTDTDLTRTAEREGKVGILVLEALEKEL 487 Query: 408 SRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISR 467 +Q T+ G VH E++ RI + + V+++ ++ + + G+ D L + R Sbjct: 488 VLPA---FQPIVDTKTGDVHAYEVLMRIREDGKLVNASRFIHVAERMGIIHRLDHLLMDR 544 Query: 468 LIPLLRYWP-EENLAIQVTVESLIRPRFQRWLRDTLMQCEKS--QRKRIIIELAEADVGQ 524 + ++ L ++ SL+ + +L+D + EK R++ E+ E D + Sbjct: 545 ALEKVKETDFSGRLFFNLSPRSLV---LEDFLKDVIELVEKHDFDPDRMVFEITERDTVK 601 Query: 525 HISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQL 584 I L+ + G AV+ G S ++K L V+ +K+ VR+I ++ Sbjct: 602 SIDLLKGFAESLKREGFHFAVDDFGSGFASFLYLKHLPVDYVKIEGEFVRSILSSKMDRA 661 Query: 585 LVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 V S++ + A V S ++ + GV QG Sbjct: 662 FVISIIALAETLEIKTIAEFVESEEVFKAMKGVGVNYVQG 701 >UniRef50_Q3JE85 Diguanylate cyclase/phosphodiesterase n=2 Tax=Nitrosococcus oceani RepID=Q3JE85_NITOC Length = 979 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 97/419 (23%), Positives = 181/419 (43%), Gaps = 13/419 (3%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A D T L NR F ++ +L + GT G ++ L F ++DT GH + Sbjct: 546 ADHDPLTELFNRRRFQHEFEQILGASIRYGTQGGLLYFDLDQFKYINDTSGHQAGDALLR 605 Query: 284 TLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLP-NNKMLD 342 + + L + ++AR +FA ++ ++ A +A ++ + TL + + Sbjct: 606 MVADKLRQVVR--GSDIVARLGGDEFAVVIRECDVESAVRVARKVCTQLSTLEFPARGGN 663 Query: 343 RDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIY--DDSLPEKGRGNVRW 399 + IGI + G +M +A+ A A +G W ++ D+ + E+ + V W Sbjct: 664 HSISLSIGIALFPLHGATVRDLMANADVAMYQAKEEGRGRWHLFSSDEQVRERMQQRVYW 723 Query: 400 RTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCRIFDGNEE-VSSAEYMPMVLQFGLS 457 + IEQ L LY +P + R + H E++ R++D +S A+++P+ Q GL Sbjct: 724 KEQIEQALREDRFLLYFQPVLDIRTHTIGHYEVLLRMYDHRGRIISPAQFIPVAEQSGLI 783 Query: 458 EEYDRLQISRLIP-LLRYWPEE---NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRI 513 D L + + I + W + L+I ++ + P L D L++ + Sbjct: 784 HAIDHLVLRKAIAQQAKLWSQGYHLTLSINLSGRVVDDPELVPILED-LLRTTGVNPSSL 842 Query: 514 IIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLV 573 + E+ E ++ + + + A G R AV+ G+ S ++K L V+ +K+ V Sbjct: 843 MFEVTETAAVADLAAAEGFMHRIKAHGCRFAVDDFGVGFSSFFYLKRLPVDYVKIDGMFV 902 Query: 574 RNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQP 632 R + K ++Q+ V++L E G + A V L + GV QG + P Sbjct: 903 RELAKSHQDQVFVKALSEVAKGLGKKAVAEFVEDAEALALLHEYGVDYAQGHYIGRPTP 961 >UniRef50_A3VS31 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VS31_9PROT Length = 567 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 100/454 (22%), Positives = 199/454 (43%), Gaps = 23/454 (5%) Query: 191 WPPR-TSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQ 249 W PR S L ++R I +E+ L+ L A D TG NR F +L+ L+ Sbjct: 106 WLPRGESDVLIAMVRRIDAQKEREEALNYL----ATYDELTGQLNRASFKEKLSDWLDGV 161 Query: 250 EKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDF 309 + +G ++++ + + +++ +G ++ + + + + G +L R + F Sbjct: 162 REGTRNGCLLLVGVDNVGSINNDFGFDVADQVIVEVASRIEDIVK--GGTVLGRLAGTKF 219 Query: 310 AALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRD-DMIHIGICAWRSGQDTEQV----- 363 LL + ++ ++ + T ++++ I + +C S T+ V Sbjct: 220 GVLLA----ADGKTTLYTTVREIMTTMRERVVETGAGGIAVSVCIGASELRTDMVSAAAA 275 Query: 364 MEHAESATRNAGLQGGNSWAIYDDSLP--EKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT 421 ++ E+A A G +S+ ++ + + R N +I L+ G L +P V+ Sbjct: 276 LKEVEAAFDQARRAGASSFKMFSEQTETISQRRQNTEISDVILTALNDRGLYLSYQPIVS 335 Query: 422 REGQV-HHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL 480 GQ H E + R+ EE+ + +++P + GL DR + + LR P+ L Sbjct: 336 DVGQAPTHFECLARMRSAGEELPAPKFIPAAERLGLVHLIDRRVLELALGTLRAHPDITL 395 Query: 481 AIQVTVESLIRPRF-QRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNAL 539 A+ ++ E++ P + + ++ C+ + R + +EL E + I + + + L Sbjct: 396 AVNLSWETVRDPLWAEGYIAHLRSHCDVTSR--LTLELTETQLVNEIEPSRDFVTAIKKL 453 Query: 540 GVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQ 599 G + A++ G S +K L++++LK+ V + ENQL V++L++ T+ Sbjct: 454 GCKFAIDDFGAGYTSFRNLKALDIDILKIDGSFVSGLTHSRENQLFVRTLLDLARNFGTK 513 Query: 600 VYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 A V + S+ Q L GV QG F PL Sbjct: 514 TVAEWVDNASDAQLLKALGVDHLQGFFIGRPGPL 547 >UniRef50_A4XTA6 Diguanylate cyclase/phosphodiesterase n=23 Tax=cellular organisms RepID=A4XTA6_PSEMY Length = 650 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 103/432 (23%), Positives = 194/432 (44%), Gaps = 20/432 (4%) Query: 211 EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLS 270 E+ SR + L R A QD TGL NR FD +L+ L E+ G ++++RL D L+ Sbjct: 224 EEASRSEKL-REEAYQDSLTGLANRRQFDIRLSNQLVVSEQ-HPDGYLLLLRLNDLGGLN 281 Query: 271 DTWGHSQVEEQFFTLTNLLSTFMMRYPGA---LLARYHRSDFAALLPHRTLKEAESIAGQ 327 G + + L + L ++ PG L +R +F L P +AE +A + Sbjct: 282 QRLGGQRTDALIAALGDALKR-LLESPGRSEWLASRNRGGEFTLLAPGLNRDDAERLASE 340 Query: 328 LIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDD 387 L +D L D + + HIGI A+R G+D V+ A+ A A W DD Sbjct: 341 LSDMLDNLRQTGASDCNPVAHIGIAAFRPGEDAGAVLGRADQALAQAQSNADRCWERLDD 400 Query: 388 SLPEKGRGNVRWRTLIEQMLSRGGPRLYQKP---AVTREGQVHHRELMCRIFDG-NEEVS 443 + +G WR+ I+ LS+G +LY +P R+ + H+ ++ R+ D E ++ Sbjct: 401 FTAQNNQGLHDWRSWIDDALSQGKLQLYFQPVAECANRDRLLQHK-VLARLLDPQGEAIA 459 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLM 503 + ++P + + G + +D + + L P+ LA+ ++ +L R + L + L Sbjct: 460 AGRFLPWIERLGWAARFDLAMLEHSLTHLAQHPQP-LALSLSAATLRDERSKARLLEMLR 518 Query: 504 QCEKSQRKRIIIELAEADVGQHI---SRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKE 560 ++ + +E+ E +H+ + L+ + + V G + + G + Sbjct: 519 NHPEAAHL-MTLEVDE----RHLPPPAELEALSQNVREAGYSLGLQHFGGRFSLIGNLTH 573 Query: 561 LNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVT 620 L + LK+ +R I++ ++ +L ++++ A + + A V + E + L + G+ Sbjct: 574 LGLAYLKIDGTYIRAIDQESDKRLFIEAIFRATNSIDLPLIAEMVETEGELEVLTELGIH 633 Query: 621 GGQGDFFASSQP 632 G G + P Sbjct: 634 GAMGRLIGAPAP 645 >UniRef50_A3YC66 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YC66_9GAMM Length = 557 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 93/433 (21%), Positives = 193/433 (44%), Gaps = 17/433 (3%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 Q +T ++ A D T L NR +F+ L LE +K + M+ L F ++D Sbjct: 115 QRQAFETELKYLANFDSMTKLPNRTYFNQALTQALESNKKDKHPLYLFMLGLDGFKEIND 174 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKA 331 T GH+ ++ ++ L + + +L+AR+ +FA L T EA+ +A +LI+ Sbjct: 175 TLGHNIGDQVLISVAERLQKILPK--DSLIARFGGDEFALLSSKFTHNEAQLLAQELIQF 232 Query: 332 VDTLPNNKMLDRDDMIH--IGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDS 388 + LP + + D + I IGI S D ++ A+ A A L G N + I+ Sbjct: 233 I-ALPFS-IFDNEIYIETSIGIADSDISKADKSTLLRFADIALSEAKLAGKNGYKIFAPE 290 Query: 389 LPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN--EEVSSA 445 + K + + + Q+L ++ +P +G E + R + ++VS A Sbjct: 291 MAHKKSEEAKIKQTLRQILENQDLIVHYQPQYNVIQGDFIGFEALARWPESEYGKQVSPA 350 Query: 446 EYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN------LAIQVTVESLIRPRFQRWLR 499 ++P+ Q L + + L +W N +++ ++ + L P F L+ Sbjct: 351 IFIPLAEQNQLIHIIGEQVLIQSCEQLAFWHARNPNCHFTISVNLSAKQLNHPLFLERLK 410 Query: 500 DTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIK 559 L+ +R++ E+ E + + + I+ + +G+R+A++ G S ++++ Sbjct: 411 AILLNYHFP-LERLVFEITETAILGNFESIIHSIQTIKDMGIRLALDDFGTGYSSLNYLQ 469 Query: 560 ELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGV 619 +L +++K+ + + + + + LV++++ + V A GV S Q ++ G Sbjct: 470 KLPFDVIKIDQSFTQQLGQCKKTEALVKAIITIADACNMDVIAEGVESNMHHQHVVALGC 529 Query: 620 TGGQGDFFASSQP 632 QG +++ + P Sbjct: 530 NKIQGYYYSPALP 542 >UniRef50_C7RPI2 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=2 Tax=Betaproteobacteria RepID=C7RPI2_9PROT Length = 645 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 100/421 (23%), Positives = 183/421 (43%), Gaps = 17/421 (4%) Query: 211 EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLS 270 E+ +RL+ L R A D TGL NR F +L L D E G G +++IRL D ++ Sbjct: 222 EEAARLEIL-RREANCDPLTGLANRGHFMARLRQTL-DAEDAG-EGTLLLIRLADLAGIN 278 Query: 271 DTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIK 330 G + + ++ TF + AR + +DFA +L A + Sbjct: 279 RRLGRAATDAFLRQAAEVIGTFANPDSQGIAARLNGADFAIVLAAGRDAHAAAHVLLAAL 338 Query: 331 AVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLP 390 P ++ + ++ IG+ + D E ++ ++A A +G N AI + + Sbjct: 339 IEAGKP---YVEGETIVSIGLGGYCRPTDLETLLARVDAALAAAEAEGVN--AIREAVIA 393 Query: 391 EKGRG---NVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIF--DGNEEVSSA 445 G +W I + + R RL P V G + HRE R+ + E +++ Sbjct: 394 AGDHGPRTAEQWAQAITRAVDREWLRLVSFPVVDAAGGLSHRECPLRLLAEENGEWLAAG 453 Query: 446 EYMPMVLQFGLSEEYDRLQISRLIPLLRYWPE-ENLAIQVTVESLIRPRF-QRWLRDTLM 503 ++P+ + L+ D ++ + L P+ LA+ ++ S+ F QR L ++ Sbjct: 454 RFLPLAERLRLTPALDLAAVALGLQELTARPDLPGLAVNLSASSVANASFRQRLL--GML 511 Query: 504 QCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNV 563 S+ +R+ +E+AE +H++ + + R + A G R+ + G + +L + Sbjct: 512 GAHASEARRLWLEVAENGALRHLAAFRELSRGLKAAGCRIGLEHFGHQFSQIGLLHDLGL 571 Query: 564 ELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQ 623 + LK+ +R ++ N ++ L G QV A GV +R+EW L++ G G Sbjct: 572 DYLKVDASFIRGLDSNRGNAAFLEGLSGIAHGIGLQVLAEGVETRAEWLALVELGFDGVT 631 Query: 624 G 624 G Sbjct: 632 G 632 >UniRef50_Q5P6G6 Putative uncharacterized protein n=2 Tax=Rhodocyclaceae RepID=Q5P6G6_AZOSE Length = 648 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 102/427 (23%), Positives = 181/427 (42%), Gaps = 7/427 (1%) Query: 211 EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLS 270 ++ RL+ L R D+ TGL NR F N+L ++L ++ + G +++ RL D L+ Sbjct: 222 DESRRLEQLRRQTQHDDI-TGLLNRGQFMNRLDSVLA-RDDARSAGTLLIGRLGDLAALN 279 Query: 271 DTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIK 330 G + + + F + R SDFA L P R + IAG+L + Sbjct: 280 QRLGRDTTNRLLHDIAHEYAAFAAPHGDWETGRIGGSDFALLAPGR--PDPAVIAGELAQ 337 Query: 331 AVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLP 390 +DT N M R + + A+ +G+ ++ + A A G + I +S Sbjct: 338 RLDTALNITMEGRGIRLPLAAGAFAAGESRSSLLARVDGALAAAERAGERAIEIAQESPI 397 Query: 391 EKGRGNVR-WRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEEVSSAEYMP 449 +++ WRT + + L R RL + P + +G + H E R+ S+ +MP Sbjct: 398 ALPFPDLQAWRTALTESLDRHDVRLARFPVLGPDGTLLHYEAPMRLMLDGSWQSAGYFMP 457 Query: 450 MVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQ 509 V + GL +D ++R+ L I ++ ESL RF+ L +L++ + Sbjct: 458 WVARLGLVARFD-AAVARVAMREIANSTTPLGINISAESLADARFRSELF-SLLEGNPAA 515 Query: 510 RKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLH 569 +R+ IE+ E + + G ++ + AG + + EL ++ +K+ Sbjct: 516 AQRLWIEVPEYGALLDQPEFRAFCLALRPFGCKLGIEHAGPRFARLADLHELGLDYIKID 575 Query: 570 PGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFAS 629 LVR I+ +Q ++SL A GV + +E + L GV G G + Sbjct: 576 AALVRGIDDDASSQGFLRSLCTIAHSIGLLTIAEGVGTEAEKRALPAFGVDGMTGPAIEA 635 Query: 630 SQPLDTN 636 Q L + Sbjct: 636 PQHLQAS 642 >UniRef50_A6V917 Membrane protein, putative n=6 Tax=Pseudomonas aeruginosa RepID=A6V917_PSEA7 Length = 1105 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 105/432 (24%), Positives = 189/432 (43%), Gaps = 21/432 (4%) Query: 223 YAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQF 282 +A+ D TGL NR F+ +L L + ++ + + I L F +++D+ GH+ + Sbjct: 670 HASHDALTGLFNRTKFEEELRRALANAQERASQHALCFIDLDRFKVVNDSAGHAAGDMLL 729 Query: 283 FTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTL--PNNKM 340 L+ +L+ LAR +F LL L AE +A +LI+ + ++ P Sbjct: 730 RELSRILAD--RTRASDTLARLGGDEFGLLLFDCDLAVAEEVASKLIEQICSVRFPWEGR 787 Query: 341 LDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRG--NV 397 + D IGI A + + T ++M A+ A A G N ++Y E R ++ Sbjct: 788 V-YDVGASIGITALTATSRSTSELMSQADVACYAAKHAGRNRVSVYQFGHEEVERQHRDI 846 Query: 398 RWRTLIEQMLSRGGPRLYQK---PAVTREGQVHHRELMCRIFDGNEEVSS-AEYMPMVLQ 453 + + + L +L + P V R H EL+ R++D + +++ ++P + Sbjct: 847 LLASGLREALENDRFQLQAQEIVPVVARRDGGRHYELLLRLYDPDGQMTPPGAFIPAAER 906 Query: 454 FGLSEEYDRLQISRLIPLLRYWPE------ENLAIQVTVESLIRPRFQRWLRDTLMQCEK 507 F L DR I+ L+ + P + I ++ SL P F +L D + Sbjct: 907 FNLMASIDRWVINE--ALINFGPRIAAIDGLTIGINLSGNSLNDPLFLPYLLDRIEHSPL 964 Query: 508 SQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLK 567 +R+ EL E + +S ++ + LG +VA++ G L S +++K V+ +K Sbjct: 965 GP-ERLYFELTETALMNQLSVASRIVDKLRDLGCKVALDDFGSGLSSFNYLKNFAVDAIK 1023 Query: 568 LHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFF 627 + VRN++K +Q +V S+ + A V SR L + GV QG Sbjct: 1024 IDGSFVRNLDKSPVDQAIVDSINQIAQRLGAVTVAEFVESREILDHLARLGVDYAQGYAV 1083 Query: 628 ASSQPLDTNVKK 639 QP T +++ Sbjct: 1084 GRPQPFATVLEQ 1095 >UniRef50_Q31HK1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HK1_THICR Length = 864 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 97/475 (20%), Positives = 205/475 (43%), Gaps = 23/475 (4%) Query: 175 ILNGERGSNVLGTIYE-WPPRTSS------ALDTLLREIQNAREQHSRLDTLIRSYAAQD 227 IL+ + V+G E +PP+ SS ++ T L + + + ++ + YA +D Sbjct: 369 ILDTPKIGGVVGLGVETFPPKESSRSVVVESILTTLVNVIGSIKAINKFTKELEYYATRD 428 Query: 228 VKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTN 287 T L N+ F LA + ++MI +F +++D +GH+ +E N Sbjct: 429 PLTHLFNQRVFHELLAYEVTRAHAHRYSFGLLMIDFDNFKLINDQYGHAFGDEVLQAFAN 488 Query: 288 LLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMI 347 + + G + ARY +F +LP + + +S++ +++ A L KM++ + Sbjct: 489 AIQQVLRE--GDIFARYGGDEFCVILPESQMDDVKSMSYKILNATSDL---KMIEPKGSV 543 Query: 348 HIGICAW------RSGQDTEQVMEHAESATRNAGLQGGNSWAI-YDDSLPEKGRGNVRWR 400 C+ +D E + A++ G NS + ++ L E + + Sbjct: 544 VTMTCSVGVSLYPDHAKDKEDLFMVADNMLYRVKDNGKNSLSYPEEEDLVEVYKESNDQS 603 Query: 401 TLIEQMLSRGGP-RLYQKPAVTRE-GQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSE 458 I L G P + +P + E G++ EL+ R+ E +S++ ++ GL Sbjct: 604 LFIMHSLETGEPIEPHYQPIICMETGEIAVHELLMRLRQNGELISASRFIETAEHMGLVN 663 Query: 459 EYDRLQISRLIPLLRYWPEENLA-IQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIEL 517 + D + I + + ++ L I ++ ++++ F ++ L + + +RI+ E+ Sbjct: 664 QMDLVLIDKALAQVQISDYRGLVFINLSPKAIVASEFIAKIK-GLTEKYEVHHERIVFEI 722 Query: 518 AEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIE 577 E + +I+ L+ +R + + G R A++ G S ++K V+ +K+ + N+ Sbjct: 723 TERETVHNIALLEKFVRELRSEGFRFAIDDFGSGFSSFQYLKRFPVDFIKIEGEFINNMS 782 Query: 578 KRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQP 632 K + V+S V + + A + ++ + Q G+ QG A+ QP Sbjct: 783 KNKIDLAFVESAVSMATSLGIKTIAEFIENKETLLLVKQLGIDYAQGFLLATPQP 837 >UniRef50_Q67KG5 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67KG5_SYMTH Length = 712 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 100/422 (23%), Positives = 194/422 (45%), Gaps = 18/422 (4%) Query: 215 RLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWG 274 R+ ++ A+QD TGL NR F +L LE G ++ + L ++DT G Sbjct: 259 RVQAALKRLASQDALTGLYNRRAFQAELERYLELARHHRVRGALLFMDLDLLKYVNDTLG 318 Query: 275 HSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDT 334 H ++ + ++ + P + AR+ +FA L+P+ T +EA S+A L++AV Sbjct: 319 HQAGDQVLVRVAEIIQAHL--RPIDIAARHGGDEFAILMPY-TGREAVSVAESLLRAVQQ 375 Query: 335 LPNNKMLDRDDMI--HIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPE 391 ++ R + IG+ + G E ++ A+ A A G N+ A++D + + Sbjct: 376 -EEFRVKGRSVTMTASIGVTFFPDHGLTAEALVAQADMAMYRAKESGRNAVAVFDGTDEQ 434 Query: 392 KGR--GNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFD-GNEEVSSAEY 447 + + W + + L LY +P + R G++ EL+ R+ D G ++ + Sbjct: 435 RIEMVAKLSWDRRLREALREDRFVLYAQPILDLRLGRITRVELLLRLVDEGGNVIAPGAF 494 Query: 448 MPMVLQFGLSEEYDRLQISRLIPLL-RYWPE---ENLAIQVTVESLIRPRFQRWLRDTLM 503 + +FGL +E DR + I L+ + P+ E + ++ +++ P R +++ L Sbjct: 495 LAGAERFGLIQEIDRWVLREAIRLIAQQEPDSEIEAFEVNLSGKTISDPGLARMIQEEL- 553 Query: 504 QCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNV 563 + + ++++E+ E + + + I + LG R A++ G S +K+L V Sbjct: 554 EASGADPSKLVLEITETAAIGDLEQARRFITAMRRLGCRFALDDVGSGFSSLRLLKQLPV 613 Query: 564 ELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR-GVTGG 622 + LK+ +RN+ ++ LV+++V Q A V R+E L++ GV Sbjct: 614 DYLKIDGAFIRNLPTEDADKHLVRAMVAMARTQGQQTIAEFV-DRAETLRLVREFGVDYA 672 Query: 623 QG 624 QG Sbjct: 673 QG 674 >UniRef50_Q0AB93 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AB93_ALHEH Length = 693 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 110/446 (24%), Positives = 195/446 (43%), Gaps = 25/446 (5%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 + +I +E H RL L A D TGL NR F ++L ++ E G ++ + Sbjct: 252 VFSDITKHKELHDRLHAL----ANYDSLTGLPNRTLFLDRLRQIIALAEHRGFSFSLLYL 307 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA 321 L F ++DT+ H+ ++ + L T + LAR +F L+ L Sbjct: 308 GLDRFKEINDTYSHTAGDQVLVEVGQRLQTCLREKDD--LARMGGDEFVILVEGEELN-V 364 Query: 322 ESIAGQLIKAVDTLPNNKMLDRDDMI---HIGICAW-RSGQDTEQVMEHAESATRNAGLQ 377 ++A +L++ TL N ++D++ IGIC + G DT+ +M A+SA A Sbjct: 365 HTVAQRLLR---TLENPILIDQEPFFVSASIGICHYPDDGADTDTLMATAQSALYQAKAA 421 Query: 378 GGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQ-VHHRELMCRI- 435 G +++Y E+ R VR + + + L L +P + + V E + R Sbjct: 422 GQGGFSLYSPDAHERARQRVRLVSDLREALEHNRLELAWQPQFGLDNRRVTGFEALARWQ 481 Query: 436 FDGNEEVSSAEYMPMVLQFGLSEEYDRLQI----SRLIPLLRYWPE---ENLAIQVTVES 488 D +S AE++P+ Q GL + R I + LL+ PE A+ ++ Sbjct: 482 RDDGRPISPAEFIPLAEQSGLIAQLGRWVIDTATAEAKALLQARPELEQARFALNLSPYQ 541 Query: 489 LIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQA 548 L + L D L + +E+ E+ + R+ + + + GVR+AV+ Sbjct: 542 L-DDSLPKILTDGLAAAGLPAGA-LEVEITESALFADQERVTETLNAIGSTGVRLAVDDF 599 Query: 549 GLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSR 608 G + + +K L + LKL L+ ++E ++ +V++L+ V A GV ++ Sbjct: 600 GTGYSNIARLKLLPIHRLKLDRSLITDLEHDHSDREIVRALLAMAEALGLDVVAEGVETQ 659 Query: 609 SEWQTLIQRGVTGGQGDFFASSQPLD 634 ++ L Q G QG +A QPL+ Sbjct: 660 AQATFLAQAGCPQAQGYLYARPQPLE 685 >UniRef50_B7K4E7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Cyanobacteria RepID=B7K4E7_CYAP8 Length = 715 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 113/433 (26%), Positives = 188/433 (43%), Gaps = 30/433 (6%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A+ D TGL NRL F+ +L L +K H ++ + L F +++DT GH+ +E Sbjct: 289 ASHDSLTGLINRLGFEQKLEEALLSAKKENQHHVLCYLDLDQFKVVNDTCGHAAGDELLR 348 Query: 284 TLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAG---QLIKAVDTLPNNKM 340 +T+LL + LAR +FA LL +L++A IA +LI+ NNK Sbjct: 349 QITHLLQQRVR--TSDTLARLGGDEFAFLLHQCSLEKATEIAETFRELIEKFRFCWNNKT 406 Query: 341 LDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIY--DDSLPEKGRGNV 397 + IG+ ++ +D V+ A++A A +G N +Y D+ K R Sbjct: 407 FSIG--VSIGVVEIDKNSKDKNSVLALADAACYAAKGKGRNCVQVYQVDNHELLKQRKER 464 Query: 398 RWRTLIEQMLSRGGPRLYQKPAVTREGQVH--HRELMCRIFDGNEE-VSSAEYMPMVLQF 454 +W I Q L RLY + + + E++ R+ D N + VS ++P ++ Sbjct: 465 QWVVQINQALEDNRFRLYSQKITPLNSHLKPIYYEILLRLLDDNGQLVSPGNFLPAAERY 524 Query: 455 GLSEEYDRLQISRLIPLL-RYWP--------EENL-AIQVTVESLIRPRFQRWLRDTLMQ 504 GL DR IS + Y+ E+NL AI ++ S+ +F +L++ L Sbjct: 525 GLMPAIDRWVISTFLKKYDNYYHQTVNKSDFEQNLYAINLSGASINSEQFLEFLKEQLTN 584 Query: 505 CEKSQRKRIIIELAEADVGQHISRLQPVIRLVNA---LGVRVAVNQAGLTLVSTSWIKEL 561 K K + E+ E I+ I L+N LG A++ G + S ++K Sbjct: 585 -SKIPLKNLCFEITETTA---IANFDQAIELINELQQLGCCFAIDDFGHGMNSFDYLKHF 640 Query: 562 NVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTG 621 V LK+ VRN+ + +Q +V+S + Q A V + + + G+ Sbjct: 641 PVNYLKIDGSFVRNLVQSEVDQAIVESFNRIGHIMNFQTIAEFVENAAILSKIEAIGLDY 700 Query: 622 GQGDFFASSQPLD 634 QG A P + Sbjct: 701 AQGYVIAKPVPFE 713 >UniRef50_B4RS68 Diguanylate cyclase/phosphodiesterase n=4 Tax=Alteromonas macleodii RepID=B4RS68_ALTMD Length = 645 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 115/520 (22%), Positives = 216/520 (41%), Gaps = 24/520 (4%) Query: 114 HPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRAT 173 HPG++ +++ + F A+ FII + +R + ++ E ++ + Sbjct: 138 HPGLANETLWESVKQSAFMFFAAFVFAYIALLFIITAITKPLRIVVNKI---EDIQNQKF 194 Query: 174 RILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLN 233 +N + + L I + R SS+++ + +E+ EQ R A +D TG+ Sbjct: 195 SHINYKPFTKELSFITQAVNRLSSSVEVMFKELTQKAEQ-------FRIQAFEDSLTGVQ 247 Query: 234 NRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFM 293 NR F + LL + G VM+IRL N ++ T G + + L +F Sbjct: 248 NRSAFTRHMNALL-SKTATSDEGYVMLIRLAQLNAINMTLGAQDGDNYVTAVAKELKSFT 306 Query: 294 MRY-PGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPN-NKMLDRDDMIHIGI 351 A L R +DF + ++ E+ +L TL + N + D + IG Sbjct: 307 SSIQETAFLFRVSGADFVLVTEAMAKQDCEA---RLKVLSTTLSHCNPLKDGSKAVWIGA 363 Query: 352 CAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGG 411 + Q ++ME+A+SA A Q N W + N W+ + Q+L + Sbjct: 364 AQFNDEQSFSEIMENADSALMAATKQ-PNGWQFASE--LTYIHSNTAWKERLNQVLEQQY 420 Query: 412 PRLYQKPAVTREGQV-HHRELMCRIFDGN--EEVSSAEYMPMVLQFGLSEEYDRLQISRL 468 + +P + E + + E R + N + + +P + L E D+L +S + Sbjct: 421 ADILIQPVMNVEENIPAYYEAFARFKEKNSGNAIPMTQLIPASERLNLIPEVDKLVVSLV 480 Query: 469 IPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISR 528 + L ++AI + SL F++WL L Q + +++ EL ++ + H Sbjct: 481 LSKLTK-SSRDVAINIANASLASASFRQWLLGLLNQ-NTALCTQLVFELEDSALIHHKDD 538 Query: 529 LQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQS 588 + + LG ++ + G L S + ++ + +K+ L ++I ++QL V S Sbjct: 539 AILFCKSLVNLGCKITIEHFGDNLASLAGLRAIQPHFVKISGKLTKDIHADQDSQLFVSS 598 Query: 589 LVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFA 628 L+ G S + A V + +E L + V QG +FA Sbjct: 599 LLSIARGLSINIIAELVENEAESVALTRLDVVYQQGFYFA 638 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 98/476 (20%), Positives = 204/476 (42%), Gaps = 22/476 (4%) Query: 182 SNVLGTIYEWPPRTSSALDT--LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFD 239 SN L + + S ALD L + Q + R++ ++R A D T L NR F+ Sbjct: 472 SNNLSLLTGFAQLASIALDNANLYQAAQQELAERKRIEEILRYLAYHDSLTELPNRTLFN 531 Query: 240 NQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGA 299 ++L+ L + VM + L F ++DT GH ++ + S + + G Sbjct: 532 DRLSMALNQAHRNKNKLAVMFLDLDHFKKVNDTLGHDIGDQLLKGIAQRFSKLLRK--GD 589 Query: 300 LLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDM---IHIGICAW-R 355 +AR +F LL + T E SI K +DTL N ++ + IGI + Sbjct: 590 TIARIGGDEFTILLHNITRAENASIVAD--KIIDTLANPWIIGNHEFHITTSIGIALYPD 647 Query: 356 SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLY 415 G D E ++++A++A A G N++ Y ++ + + + L R +Y Sbjct: 648 DGTDAESLLKNADAAMYQAKEMGRNNYQFYTPTMNAQTLRRFELENNLRRALDRKEFVIY 707 Query: 416 QKPAV-TREGQVHHRELMCRIFDGNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLR 473 +P V G++ E + R +S AE++PM + GL + R + Sbjct: 708 YQPQVEIHTGKIVGVEALIRWQHPQRGMISPAEFIPMAEETGLIIPIGEWILRRACAQNK 767 Query: 474 YWPEENLA-----IQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISR 528 W + + + ++ ++P +++ + L + + +E+ E+ + ++ Sbjct: 768 AWQDRGFSPMRVTVNLSARQFLQPHLPQYISNVLEDTGLGPQ-WLELEITESLAMKDVAF 826 Query: 529 LQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQS 588 + + + +G+ +A++ G S +++K L +++LK+ + ++ +++ ++ + Sbjct: 827 TEKTLIELRKMGITLAIDDFGTGYSSLNYLKRLPIDILKIDRSFIHDLNTESDDVAIISA 886 Query: 589 LVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRY 644 ++ +V A GV ++ + L Q+ QG F P V++ Q+Y Sbjct: 887 IITLGHNLKMKVVAEGVETKEQLMFLRQQQCDLMQGYLFTKPLP----VRELEQKY 938 >UniRef50_D0I7X8 GGDEF and EAL domain-containing protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I7X8_VIBHO Length = 644 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 95/414 (22%), Positives = 176/414 (42%), Gaps = 15/414 (3%) Query: 198 ALDTLLREIQNAREQ-HSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHG 256 ALD L IQ + H L TL S V +GL NR +F +QL + + ++E G G Sbjct: 208 ALDNLANHIQRIIQSLHRELKTLNNSLMYDPV-SGLPNRQYFTHQLGSWMTEEE--GVPG 264 Query: 257 IVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR 316 V + + +++ +G+ +E + L L + +P +AR ++ A +LP Sbjct: 265 AVFIADMSWMDIIYRRYGYVARDETWQLLAGSLQSAFRAHPNVCIARLSDTEIALILPQS 324 Query: 317 TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGL 376 + ++ + LI ++ + ++ HIG+ G Q++ A++A + A Sbjct: 325 SEEQCQQGLHTLISTLNNEVTMAGFNTNEGFHIGVVHGH-GLPGTQLLSLADNALQRAIK 383 Query: 377 QGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT---REGQVHHRELMC 433 Q + +++ + E+ G WR+L+ L RL +P +G HRE+ Sbjct: 384 Q--HDVFVFNRASEEQVIGRETWRSLLNDALKHKAIRLLAQPVYPLSGNKGVALHREIFT 441 Query: 434 RIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP-EENLAIQVTVESLIRP 492 S MP + F E+DR+ I L+ L + P E +A+ +T +SL Sbjct: 442 HANIEGSWQSGGRLMPYIQLFKKGIEFDRVVIEHLVGLHKASPITETVALNLTNDSLESH 501 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 F WL+ L + +I E++EA ++S + G + ++ G L Sbjct: 502 EFLSWLQTLLTTILPA--DKICFEISEASACNNLSACIAFSEGIRKAGATIGIDHFGRYL 559 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVR 606 ++ L + +KL + ++ +++L + L V ATGV+ Sbjct: 560 QEVEYLTVLKPDYVKLDHAFSQ--DQNAQSRLFIDMLANIAESQGITVIATGVK 611 >UniRef50_C3VA06 Putative phospholipase A2 family protein n=1 Tax=Pseudomonas nitroreducens RepID=C3VA06_9PSED Length = 645 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 101/438 (23%), Positives = 195/438 (44%), Gaps = 13/438 (2%) Query: 206 IQNAREQHSRLDT--LIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRL 263 I+N R + + +T +I A D T L NR FF + L++ + V +++I++ Sbjct: 197 IENLRIRAKKRETEAIIHHMAFYDALTQLPNRQFFYKKAQALIDGSKGVHQSFALLIIKV 256 Query: 264 PDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAES 323 F+ +++T+G Q ++ + L Y A + R ++FA LL + ++ A Sbjct: 257 RQFHEINETFGFPQGDKILMEIKQRLCETFGSY--AEVFRVGDAEFALLLHNADVESATH 314 Query: 324 IAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSW 382 I+ +++ T L++ + +GI + G + E ++ HA SA A + G + Sbjct: 315 ISHRVVSLFQTQGEKTGLNQYTRLTVGIAVYPGHGLEPELLIRHARSAMSEA-RRTGRDY 373 Query: 383 AIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFD-GNE 440 A++ + L E + + +S G LY +P V+ + + E + R E Sbjct: 374 AVFSNRLDEGCSRRLELTAELRDAISSGDLMLYCQPKVSSDKSTLCGAEALVRWRSRAGE 433 Query: 441 EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN----LAIQVTVESLIRPRFQR 496 VS +E++P+ GL + + W E LA+ ++ + L PR Sbjct: 434 MVSPSEFVPLAEFSGLITQLTHWVLETAFRQRFAWHELGINIPLAVNLSAQDLYDPRLVG 493 Query: 497 WLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTS 556 + + LM SQ I E+ E+ + + S I+ + ++G++ A++ G+ S S Sbjct: 494 KV-EGLMATWGSQGSWIQFEVTESGLMKDPSVALETIKKIKSMGIKFAIDDFGVGYSSLS 552 Query: 557 WIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQ 616 ++ L V+L+K+ V+ + E +V S +E + +V A GV S L + Sbjct: 553 YLSNLPVDLIKIDQSFVKAMLNEPEAAAIVGSTIELAHQLNFEVVAEGVESEEVRDRLEK 612 Query: 617 RGVTGGQGDFFASSQPLD 634 G QG F ++ P++ Sbjct: 613 MGCDIIQGYFISAPIPIE 630 >UniRef50_C9R8T9 Diguanylate cyclase/phosphodiesterase with GAF sensor n=1 Tax=Ammonifex degensii KC4 RepID=C9R8T9_AMMDK Length = 673 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 96/444 (21%), Positives = 196/444 (44%), Gaps = 15/444 (3%) Query: 205 EIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLP 264 E+ REQ ++ + D TGL +R + ++ L + + G +++I + Sbjct: 222 EVLAHREQCLQVQEKLHHLVHHDPLTGLPHRFYLEDHLKQAVLKARR-GISSALLVIDID 280 Query: 265 DFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESI 324 +F +++D WG+ + L + ++AR F L+ +EA + Sbjct: 281 NFQLVNDNWGYKAGDRLLQAFARFLQENIREED--IIARVAGDKFMVLMEDVFEEEACKL 338 Query: 325 AGQLIKAVDTLPNNKMLDRDDM---IHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNS 381 A +L + V+ + LD + GI + + E VM A+ A R A +G N Sbjct: 339 AEELRRRVEE--GSFELDGQRCRITVSAGISMVKGDEAAETVMSQADLALRRAKEEGRNR 396 Query: 382 WAIY--DDSLPEKGRGNVRWRTLIEQMLSRG-GPRLYQKPAV-TREGQVHHRELMCRIFD 437 ++ ++ L + +G L+++ L+ G G L+ +P V + QV H E + R+ + Sbjct: 397 VVLFRPEEELLARLKGEQEVLNLLKEALATGRGLLLFLQPVVRLSDLQVVHYEALLRLRE 456 Query: 438 GNEE--VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQ 495 N + S A+++P+ +FGL DR I + +LR P+ L + ++ S+ Sbjct: 457 CNMDRYCSPAQFIPLAERFGLMPRLDRWVIEAALDILRAHPKLKLFVNLSGLSVGDDSLL 516 Query: 496 RWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVST 555 +L+ L + E R+ E+ E +++ R + + + LG +A++ G + Sbjct: 517 EYLQAKLKEKEVDP-SRLGFEVTETAAIRNLLRAERWLGRLKQLGCELALDDFGSGFSTF 575 Query: 556 SWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLI 615 S+++ L V LK+ +R + ++ LV+++ A G+ + + L Sbjct: 576 SYLRSLPVNYLKIDLSFIRGLTSDRMHRALVEAMNTVAHTLGKLTVAEGIENEETLRILQ 635 Query: 616 QRGVTGGQGDFFASSQPLDTNVKK 639 + G GQG +F +P++ + + Sbjct: 636 ELGTDFGQGYYFGRPEPVEAIIAR 659 >UniRef50_B3PKS7 Diguanylate cyclase/phosphodiesterase domain 2 (EAL) n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKS7_CELJU Length = 940 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 104/456 (22%), Positives = 197/456 (43%), Gaps = 23/456 (5%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 L +I + +E +L+ + A D T L NR+ +++ L ++ G VM I Sbjct: 480 LFNDITHIKEHQRQLEHI----AHYDALTHLPNRVLLADRMKQALLHSQRSGLSLAVMYI 535 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA 321 L F ++D +GH ++ +++ + + LAR +F +L L++ Sbjct: 536 DLDGFKAINDQYGHDLGDQLLVAISSRFKSVLRE--SDTLARIGGDEFVVVL--NELEQP 591 Query: 322 ESIAGQLIKAVDTLPNNKMLDRDDMIHI----GICAWRSG-QDTEQVMEHAESATRNAGL 376 + L + + T + +L RD + I GI + S D EQ++ HA+ A A Sbjct: 592 AAYQPVLDRLLATAADPLIL-RDQALRITASIGITLYPSDTADAEQLIRHADQAMYLAKQ 650 Query: 377 QGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRI 435 +G N W ++D + I L + L+ +P V + G + E + R Sbjct: 651 RGKNGWHLFDVDRDVATKHQYESLERIRLALEQREFILHYQPKVNMKTGALVGAEALIRW 710 Query: 436 FDGNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVE----SLI 490 +S E++P++ + + + I + + +W E LA+ V+V L Sbjct: 711 QHPTRGMISPGEFLPLIEEHPIGLDVGEWVIDTALSQIEHWQREGLALPVSVNLCALQLQ 770 Query: 491 RPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGL 550 + RF + L + L ++ +E+ E ++ + +R NALGVR AV+ G Sbjct: 771 QGRFAQRLSELLQAHPDVAPGQLELEIVETSALADMTDVANTMRACNALGVRFAVDDFGT 830 Query: 551 TLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSE 610 S +++K L E LK+ +R++ ++ +V+ ++ QV A GV S + Sbjct: 831 GYSSLTYLKRLPAETLKIDQSFIRDMLDDPDDFAIVKGVISLAQAFHRQVIAEGVESVAH 890 Query: 611 WQTLIQRGVTGGQGDFFASSQP-LDTNVKKYSQRYS 645 + LI G QG + ++P L + + QR++ Sbjct: 891 GEMLIPLGCELAQG--YGIARPMLAGEISSWIQRWT 924 >UniRef50_C7RNJ0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNJ0_9PROT Length = 957 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 95/431 (22%), Positives = 180/431 (41%), Gaps = 13/431 (3%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + R ++ + A D TGL NR F ++L L ++ G ++ + L F ++D Sbjct: 527 ERKRAESHVSYLAEHDPLTGLVNRQHFQHELDKALLSARRLARDGALLYLDLDGFKYVND 586 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKA 331 GH + T+ + ++ + LL R + LL A +A ++ K Sbjct: 587 LSGHQAGDALLRTVADEVAN--VARSSDLLGRLGGDELGVLLHECDRDGAVQVAEKINKR 644 Query: 332 VDTLPNNKMLDRDDM-IHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYD--D 387 + + ++ + IGI + + D +Q++ +A+ A A +GG W IY + Sbjct: 645 LAEIRFPELAASHRVSASIGIVVFSEATMDVKQLLANADIAMYQAKSRGGAGWHIYSEGE 704 Query: 388 SLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCRIFDGNEE-VSSA 445 + EK + + W +I + L G +Y +P + R QV H E + R+ + + Sbjct: 705 GVQEKMQSRLHWEEMINRSLLDEGLLVYYQPILDIRARQVSHYEALVRMRSADGSIIPPG 764 Query: 446 EYMPMVLQFGLSEEYDRLQI----SRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDT 501 +M + GL E DR I +++ L +I ++ S+ R ++RD Sbjct: 765 LFMEVAEDSGLIREIDRRVIHQVFGKMLALFAIGRSYKFSINLSGVSINDARLLSFIRDE 824 Query: 502 LMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKEL 561 L + ++ E+ E S + + V LG +++ G+ S +++K+L Sbjct: 825 LSRSPLLP-SHVVFEITETAAVSDFSAARTFMNAVRELGCAFSLDDFGVGFSSFNYVKQL 883 Query: 562 NVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTG 621 V+ +K+ VR + ++Q+ V++L E G + A V + L GV Sbjct: 884 PVDYVKIDGSFVRTLVDSPDDQVFVRALAEVARGFGKKTVAEFVEDERALKMLRSFGVDY 943 Query: 622 GQGDFFASSQP 632 QG F P Sbjct: 944 AQGYFIGKPAP 954 >UniRef50_C6WW34 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WW34_METML Length = 623 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 100/444 (22%), Positives = 192/444 (43%), Gaps = 25/444 (5%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 I+ A D+ T L NRL ++L L + HG ++ I L F L+DT GHS + Sbjct: 181 IQHLAYYDLLTNLPNRLLLIDRLQHTLAMSARHQNHGALLFIDLDHFKTLNDTKGHSVGD 240 Query: 280 EQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL------PHRTLKEAESIAGQLIKAVD 333 + L T M G LAR +F +L + +AE++ ++I A++ Sbjct: 241 LLLVEVAKRLQTCMRE--GDTLARLGGDEFVVILQDLSEDSSQAAVQAETVCAKIISAIN 298 Query: 334 TLPNNKMLDR---DDMIHIGICAWRSGQDT-EQVMEHAESATRNAGLQGGNSWAIYDDSL 389 LP LD +G+C +R+ + T +++++ A+ A A G N+ YD ++ Sbjct: 299 -LP--YYLDSYLYHSSTSVGVCLFRNQEFTVDELLKRADIAMYQAKSAGRNTQRFYDPTM 355 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEE-VSSAEYM 448 + + + + RLY + V G VH E + R + V +++ Sbjct: 356 QAALEARAALESDLRLAIKKNQFRLYYQMQVDHSGNVHGAEALIRWQHPQKGLVPPLQFI 415 Query: 449 PMVLQFGLSEEYDRLQISRLIPLLRYWPEENL------AIQVTVESLIRPRF-QRWLRDT 501 P+ + GL + ++ W + L A+ V+ P F +R + Sbjct: 416 PLTEETGLIIPIGHWVMETACAQIKRWESDPLTRNLQVAVNVSACQFHDPSFVERAIE-- 473 Query: 502 LMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKEL 561 ++ K + + +EL E+ V ++ ++ + + GV +++ G S S++ +L Sbjct: 474 MLSRHKIKPGNLKLELTESLVLDNVEEAIMKMQALKSYGVLFSMDDFGTGFSSLSYLTKL 533 Query: 562 NVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTG 621 ++ LK+ +RN+ + ++VQ+++ + +V A GV S ++ + L Q Sbjct: 534 PLDQLKIDQSFIRNMCMNNRDAVVVQTIIGMANNLGIEVIAEGVESETQREFLEQNKCNL 593 Query: 622 GQGDFFASSQPLDTNVKKYSQRYS 645 QG F+ P+D K Q ++ Sbjct: 594 CQGYLFSQPLPIDAFENKLRQIHA 617 >UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S8G6_CHRVI Length = 861 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 97/438 (22%), Positives = 187/438 (42%), Gaps = 18/438 (4%) Query: 205 EIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLP 264 +I + + SRL+ L A DV TGL NRL +L L+D ++ V + L Sbjct: 282 DITDLKNSQSRLENL----AHYDVLTGLPNRLLLGYRLRQALDDAQRHERLAAVCFLDLD 337 Query: 265 DFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESI 324 +F +++D GH + + L + +AR +F LL L+ E + Sbjct: 338 NFKLVNDHHGHETGDRLLIDIGRRLRDTLR--SNDTVARLGGDEFVILL--NDLRNQEEL 393 Query: 325 AGQLIKAVDTLPNNKMLDRDDMI---HIGICAWR-SGQDTEQVMEHAESATRNAGLQGGN 380 L++ +D + + +D ++ +G+ + D + ++ HA+ A A G N Sbjct: 394 DNVLVRLLDGVAHPVRIDALQIVITVSVGVTIYPLDDHDPDTLLRHADQAMYQAKQMGRN 453 Query: 381 SWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN 439 + ++D + R I Q L G +LY +P V R GQV E + R Sbjct: 454 RYQLFDPEAANAMQSRHRELERIRQALQHGEFQLYYQPKVDMRLGQVVGMEALIRWRHPE 513 Query: 440 EE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN----LAIQVTVESLIRPRF 494 V +++P++ L E + + +R W E +++ + + F Sbjct: 514 RGLVPPLQFLPLIEASPLIVEVGEWVLHEALGQIRQWCAEGRPLTISVNIAAHHFQQRDF 573 Query: 495 QRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVS 554 L+ L + ++ + + +E+ E+ + I ++ ++ A+GVR A++ G S Sbjct: 574 VLRLQTILAEHPEATPRLLELEILESAALEDIQSVRGIMTACQAMGVRFALDDFGTGYSS 633 Query: 555 TSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTL 614 S++K+L E LK+ VRN+ + +E+ +++ ++ +V A GV + + L Sbjct: 634 LSYLKQLPAETLKIDQSFVRNMLEDSEDLAIIEGVIGLAKVFRKEVIAEGVETPEQGLLL 693 Query: 615 IQRGVTGGQGDFFASSQP 632 ++ G QG P Sbjct: 694 MRFGCDHAQGYGIGRPMP 711 >UniRef50_C6WYS6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYS6_METML Length = 934 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 112/461 (24%), Positives = 192/461 (41%), Gaps = 35/461 (7%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 L +I A+EQ L+ + A D T L NR ++L L E+ G V + Sbjct: 480 LFSDITQAKEQQQNLERM----AYHDPLTQLPNRALLSDRLQQALARAERSGELLAVCCL 535 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKE 320 L F ++DT GH + L +S + +AR +FA LL +++ E Sbjct: 536 DLDGFKPVNDTLGHEAGDYLLVQLAVRMSACLR--DSDTVARLGGDEFAVLLCGLQSIDE 593 Query: 321 AESIAGQLIKAVDTLP---NNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQ 377 +L+ + T P +K + I I G + + ++ HA+ A A L Sbjct: 594 CTQTLERLLSVIKT-PYSIGDKSVTVSSSIGYTIFP-DDGCEPDTLLRHADHAMYQAKLN 651 Query: 378 GGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQV---------H 427 GG+ +D + RG + R +E LS RLY +P V R+G+V Sbjct: 652 GGSRVQQFDSHHDRQFRGLRQDRERVEAALSNQEFRLYYQPKVDLRQGKVVGMEALIRWE 711 Query: 428 HRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVE 487 H EL R S A ++P+V S IS + +R W L QV+V Sbjct: 712 HPELGLR--------SPATFLPIVENTDFSIPLGEWVISEALGQIRVWQAAGLDFQVSVN 763 Query: 488 ----SLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRV 543 +++ F L L + + +I +E+ E + +S + I LGV Sbjct: 764 IAARHIVQSNFTERLVLLLAEFPEVAPHKIELEITETAAIEDVSGVANTINTCKQLGVSF 823 Query: 544 AVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYAT 603 A++ G+ S ++++ L VE +K+ VR++ + ++ +V ++ +V A Sbjct: 824 ALDDFGVGYSSLTYLRRLPVETIKIDQSFVRDMLQDVDDLAVVAGVISLSRDFKRKVVAE 883 Query: 604 GVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRY 644 GV + + L++ G + QG A P D V+++ + Y Sbjct: 884 GVENSEQGLWLLRMGCSVVQGYGVARPMPAD-EVQQWVESY 923 >UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n=2 Tax=Proteobacteria RepID=Q2W1Z2_MAGSA Length = 1510 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 99/423 (23%), Positives = 185/423 (43%), Gaps = 25/423 (5%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 I A D TG+ NR ++L + ++ T V+ I L +F +++D+ GH + Sbjct: 1072 IEFLATHDELTGIPNRSLLMDRLKHAVAQAKRQKTKLAVLFIDLDNFKVINDSLGHDVGD 1131 Query: 280 EQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNK 339 + T L + LAR +F A+L +L++ S+A ++ VD L + Sbjct: 1132 QLLKQATERLKHCV--RDSDTLARLGGDEFVAVLTDVSLEKVNSVAARI---VDFLGASF 1186 Query: 340 MLDRDDMI---HIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRG 395 ++ + IGI + GQD+ +++HA++A A +G N + + D + Sbjct: 1187 SINDKSLFVSASIGISVFPDDGQDSLTLLKHADTAMYRAKERGRNQYQFFADEMKVIALQ 1246 Query: 396 NVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQ 453 + T + L R+ +P V G+V E + R D EVS A ++P+ Sbjct: 1247 RLTLETGLRLALETKSFRMCYQPQVDIHTGEVVGAEALLRWRDPTLGEVSPAHFIPIAES 1306 Query: 454 FGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQ----RWLRDTLMQ 504 GL + ++ + YW E+ L AI V+ L F WL + + Sbjct: 1307 CGLIGAIGETVFTMVLEQIAYWREKGLTVPRIAINVSAHQLRDAGFAAKVGSWLDSSGIS 1366 Query: 505 CEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVE 564 E I IEL E+ + + I ++ ++ + +G++V+++ G S S++K+L + Sbjct: 1367 SE-----LIGIELTESALMERIDMVKEMLTSFDGMGMKVSIDDFGTGYSSLSYLKKLPIH 1421 Query: 565 LLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 LK+ V I +++ + +++++ +V A GV S + L + G QG Sbjct: 1422 ELKIDRSFVDGIALERDDRSIAKAIIDMSRALGMRVVAEGVESEEQLGVLKEEGCDMVQG 1481 Query: 625 DFF 627 F Sbjct: 1482 YLF 1484 >UniRef50_B9YYD0 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YYD0_9NEIS Length = 640 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 109/441 (24%), Positives = 182/441 (41%), Gaps = 33/441 (7%) Query: 198 ALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGI 257 A++TL I++ ++ +R +R+ D TGL NR F+ ++ L D + G Sbjct: 213 AMNTLSGRIKSMLDEAARHIDQLRAATLSDPLTGLANRSRFEERMIGELAD-PQAAAEGE 271 Query: 258 VMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT 317 +M++RLPD + G V + + + L G AR ++F L+P Sbjct: 272 LMLVRLPDLAEANKRLGGDAVNRRLKHVASELQRSASGQTGWQAARLRGAEFVLLMPGAE 331 Query: 318 LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEH---------AE 368 + AE +A +L + + D G WR+ + +H A Sbjct: 332 PQAAERLATEL--------GERWQEASDPAAAG---WRATLGLTRYAQHDTLPAILLRAN 380 Query: 369 SATRNAGLQGGNSWAIYDDSLPEKG---RGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQ 425 A A Q SW YD P+ G + W + + L+ RL P V EG Sbjct: 381 EAVTLAEQQSSKSWCRYD---PDGGTLPSSDFDWNKRLREALADHAFRLAFYPVVNGEGA 437 Query: 426 VHHRELMCRIFD-GNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQV 484 V H+E M + G + + + GLS D+ I + LL + +A+ + Sbjct: 438 VIHQEGMITLPQHGASTLRAGTLTAHAARLGLSPALDQEAIEQ--ALLSLAGQRVIAVNL 495 Query: 485 TVESLIRP-RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRV 543 + SL P F +RD L Q Q K + +E E + + Q R + LGVR+ Sbjct: 496 SAPSLDVPYAFTETVRDRL-QASLPQGK-LALEWLEPGLAERWPAFQGFCRSIRPLGVRI 553 Query: 544 AVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYAT 603 + G + + E++++ L + L+R E QLL+ +L++ +VYA Sbjct: 554 GLEMTGEHFNLLARLHEVSLDYLVIDGALIRGAESDPGAQLLLSNLLQVARMLDLEVYAK 613 Query: 604 GVRSRSEWQTLIQRGVTGGQG 624 GV + +E L++ GV G G Sbjct: 614 GVTTSAEGSQLLRAGVDGITG 634 >UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM39_THASP Length = 920 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 105/447 (23%), Positives = 189/447 (42%), Gaps = 32/447 (7%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 Q + + L+ A D TGL NR +++A + + + G++M++ + F L+D Sbjct: 475 QRKQSEALLHRLAYFDALTGLPNRALLHDRIAQAIRSGVRRESFGMLMLVDIDRFRQLND 534 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH------RTLKEAESIA 325 T GH+ + + L + +AR+ DFA L+ L AE +A Sbjct: 535 TLGHAAGDRLLCEVAARLRASVREED--TVARHGDDDFAVLVERIGETEADALSHAEHVA 592 Query: 326 GQLIKAVD---TLPNNKMLDRDDMIHIGICAWRSGQDT-EQVMEHAESATRNAGLQGGNS 381 +L +A+ L + + GI + G + E +++ AE A A G + Sbjct: 593 RKLQRALQQPYVLGGTEGDRHFATLSFGISLFHDGVSSLESLLKQAEVALYRAKQDGRDI 652 Query: 382 WAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCR-IFDGNE 440 ++ + + R + + L RL+ +P V R G V E + R DG Sbjct: 653 VRFFNPEMQAVVDAHARLEARMHEALEANAFRLFFQPQVNRRGVVIGAEALLRWPLDGGA 712 Query: 441 EVSSAEYMPMVLQFGLSEEYDRLQI----SRLIPLLRYWPEEN-----LAIQVTVESLIR 491 VS AE++P+ G RL + S L R+ E +A+ V+ + Sbjct: 713 MVSPAEFIPLAEDTG---HIVRLGLWVLRSACAQLARWQMNEGTRHLKIAVNVSARQFHQ 769 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVN---ALGVRVAVNQA 548 P F ++D++ + R+ +EL E+ + +S + IR +N ALG+R A++ Sbjct: 770 PDFVASVKDSV-RAAAIDPCRLELELTESAI---LSDVDETIRRMNELRALGIRFALDDF 825 Query: 549 GLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSR 608 G S S++K L + LK+ VR++ + ++ +V +++ +V A GV Sbjct: 826 GTGYSSLSYLKRLPFDQLKIDQSFVRDMAEDESSEAIVLAILSLSHALGLEVVAEGVEMP 885 Query: 609 SEWQTLIQRGVTGGQGDFFASSQPLDT 635 + L Q G QG F P++ Sbjct: 886 EQRDFLRQHGCDSFQGYLFGKPLPMEA 912 >UniRef50_B9R245 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R245_9RHOB Length = 892 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 97/431 (22%), Positives = 189/431 (43%), Gaps = 12/431 (2%) Query: 217 DTLIRSYAAQDVKTGLNNRLFFDNQLATLLE---DQEKVGTHGIVMMIRLPDFNMLSDTW 273 D ++ A D T L NRL F L +++ D ++V + +++I L DF ++D+ Sbjct: 454 DERVKKAAETDNLTELANRLSFRETLDHVVDIAGDADEVASS--LLLIDLNDFKAVNDSH 511 Query: 274 GHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVD 333 GH + + N L + G L AR +FA +L RT ++ IA L D Sbjct: 512 GHVVGDRLLQHVANTLKA--VSEGGDLAARLGGDEFALVLKPRTEEDIREIANGLCAVFD 569 Query: 334 TLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK 392 N L + +G+ + G +E+ + A+ A A + +++ ++D + ++ Sbjct: 570 LPVNLDGLMVQSGLSVGVAIISADGTGSEETLSRADLALYKAKQEKRSAYRVFDADIAKE 629 Query: 393 GRGNVRWRTLIEQMLSRGGPRLYQKPAVTREG-QVHHRELMCRIFDGNEE-VSSAEYMPM 450 R + + +++ G ++ +P + E +V H E + R G E V + ++P+ Sbjct: 630 DAERKRTKNALIRVVENQGLDVFCQPILNLETHRVDHFEALVRWHQGEESYVPPSNFIPL 689 Query: 451 VLQFGLSEEYDRLQISRLIPLLRYWPEENLA-IQVTVESLIRPRFQRWLRDTLMQCEKSQ 509 + GL + +S ++ L WP + A + V+V L RF + + L + S Sbjct: 690 AEEIGLIAKVGDFVLSEVLRSLATWPNDYRACVNVSVLQLGDGRFVERVLNGLKEAGISP 749 Query: 510 RKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLH 569 R+ +EL E+ + S +R + G+ +A++ G+ S +++EL LK+ Sbjct: 750 H-RLELELTESVLMSAGSAAHEDLRKLRDAGLNLALDDFGIGFSSFGYLQELPFNKLKID 808 Query: 570 PGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFAS 629 V +EK + +++++ + A GV + + + G GQG F Sbjct: 809 RRFVSEVEKDEGSAAILRTIAALADNLDMKSTAEGVETAQQLSVVTACGCHYGQGYFIGQ 868 Query: 630 SQPLDTNVKKY 640 PL+ + Y Sbjct: 869 PIPLEDVQQAY 879 >UniRef50_A6F7G4 PAS sensor diguanylate cyclase and phophodiesterase n=2 Tax=Moritella sp. PE36 RepID=A6F7G4_9GAMM Length = 911 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 98/428 (22%), Positives = 187/428 (43%), Gaps = 25/428 (5%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A D+ TGL NR F++QL+ + + ++ + L F +++DT GH+ +E Sbjct: 483 AKHDMLTGLINRYEFEHQLSDAVCSVQGSQLTHVLCFLDLDQFKIINDTCGHAAGDELLR 542 Query: 284 TLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDR 343 + L+ + P LAR +FA L+ L EA A +++ V + + + Sbjct: 543 QIAGLIGDNLK--PNDTLARLGGDEFAVLMRDCQLTEAVVAANEILDKVKKF---QFIWK 597 Query: 344 DDMIHIG-------ICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIY--DDSLPEKGR 394 +G IC + +T +V+ HA+ A A G N Y +D L Sbjct: 598 KSCFSVGVSIGVAEIC--NTSGNTSEVLIHADLACYAAKDLGRNRVHTYHDNDELLTARD 655 Query: 395 GNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHR--ELMCRIFDGNEE-VSSAEYMPMV 451 RW I++ L+ LY +P V + E++ R+ D N +S ++P+ Sbjct: 656 DEFRWVNEIKEALNEDRFELYAQPIVALQDTAQKPIFEVLLRMQDKNGALISPGVFLPIA 715 Query: 452 LQFGLSEEYDRLQISRLIPLLRYWPE-----ENLAIQVTVESLIRPRFQRWLRDTLMQCE 506 ++ LSE DR I R + ++ + ++++I ++ SL + + T+ Q + Sbjct: 716 ERYNLSEPIDRWVIDRTLQWMKAHSQQLDMFDHISINLSGASLGDSDLLQHIMTTITQAK 775 Query: 507 KSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELL 566 S + +I+ E+ E +++ I ++ G + A++ G L S +++K L V L Sbjct: 776 VSPQ-QIMFEITETAAISNLASATIFINTLSTFGCQFALDDFGSGLSSFAYLKNLPVNTL 834 Query: 567 KLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDF 626 K+ +++I + +V+S+ E + A V + + Q + G+ QG Sbjct: 835 KIDGIFIKDILTNPIDAAMVKSINEIGHLMKLKTIAEFVENDAIKQKVETIGIDFAQGYG 894 Query: 627 FASSQPLD 634 QP+D Sbjct: 895 IGKPQPID 902 >UniRef50_D2SHC8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SHC8_9ACTO Length = 846 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 116/452 (25%), Positives = 197/452 (43%), Gaps = 32/452 (7%) Query: 197 SALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHG 256 SALD++L + NA + +L T IR A D TGL NR ++ LL G G Sbjct: 381 SALDSMLTHV-NAAIRQQQLLTQIRYDADHDRLTGLPNRQRLAVEIDELLVADPVTGRAG 439 Query: 257 IVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR 316 +++ L ++ ++DT GH+ +E LL P AL+AR FA LLP Sbjct: 440 LILA-SLDNYAEVTDTLGHAASDELLLVTAGLLREHA--PPQALVARMEGEQFAVLLPGL 496 Query: 317 TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAG 375 +L E A +L +A T LD + + IG+ A G D+ +M+ A+ A Sbjct: 497 SLPATERAARRLREATSTRVRVAGLDLEVTLTIGVAAAPVHGADSGTLMQRADVALLAGA 556 Query: 376 LQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCR 434 G + A Y L ++ ++ T +EQ ++ G + +P + R + E + R Sbjct: 557 --GKSGVASYHPVLDQQSLRRLQLGTELEQAMADGDISVVFQPIIDARTSDIVSVETLVR 614 Query: 435 -IFDGNEEVSSAEYMPMVLQFG----LSEEYDRLQISRLIPLLRYWPEENLAIQVTVE-- 487 ++ E++ + Q G L++ L ++R R W ++++A+ V V Sbjct: 615 WAHPRYGAIAPDEFIHLAEQIGRIGPLTDHVLDLALARC----RRWLDQDIALSVAVNLS 670 Query: 488 --SLIRP----RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGV 541 L P R +R LR + E + +EL E V R V+ ++ALG+ Sbjct: 671 ARCLTEPDLVDRVRRALRRHGVPGEL-----LTLELTEGSVVDDSVRSSTVLADLHALGM 725 Query: 542 RVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVY 601 R++++ G S S +++L ++ +K+ V + + +S++E +V Sbjct: 726 RLSMDDFGTGYSSLSQLRQLPIDEVKIDKSFVLGMSTSQGESFIARSIIELAHNLGLRVV 785 Query: 602 ATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 A GV L + G QG F S+PL Sbjct: 786 AEGVEDELTRNLLAEMGCDKLQG--FLVSRPL 815 >UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGZ6_9PROT Length = 595 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 86/456 (18%), Positives = 203/456 (44%), Gaps = 35/456 (7%) Query: 194 RTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVG 253 +T L+ L+ + REQ + A D T L NR+ F ++L + ++ Sbjct: 143 KTQLDLEKNLKILDEQREQ-------LEYQANHDSLTDLPNRVLFMDRLQQSINIAQRYD 195 Query: 254 THGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL 313 ++ I L F ++D+ GH ++ ++ + M + L+R +F +L Sbjct: 196 NKVALLFIDLDHFKEINDSLGHGVGDKVLIEVSRRMKNQMRK--SDTLSRLGGDEFCIIL 253 Query: 314 PHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDM---IHIGICAW-RSGQDTEQVMEHAES 369 + + E ++ + ++ L ++ + + IG+ + G ++++A++ Sbjct: 254 --NDIIDIEDMSDIITSGMEALKEPMEINGHTLYVGMSIGVSVYPNDGNSASSLLKNADA 311 Query: 370 ATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV-TREGQVHH 428 A A G N++ YD+++ E+ V T + + L +Y +P + RE ++ Sbjct: 312 AMYKAKGDGRNTYCFYDEAMTERAFERVFLETALRKALEEDELVVYFQPQIDARENKLVG 371 Query: 429 RELMCRI------FDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE---- 478 E + R F + +++P+ G+ + DRL + + + + W + Sbjct: 372 MEALVRWEHPIMGF-----IYPDKFIPLAEITGMIVQLDRLVMKKALTQFKKWDKAGLNP 426 Query: 479 -NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVN 537 LA+ + ++ + F ++ + ++ CE K I EL E + + ++ ++ Sbjct: 427 GKLALNLAIKQIEENDFIEFI-ENILDCEDCSYKNIEFELTENQIMNNPEASIETLQKLS 485 Query: 538 ALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTS 597 LG+ +A++ G S +++K L ++ LK+ ++++ + ++ + ++++ CS + Sbjct: 486 DLGISIAIDDFGTGYSSLAYLKRLPIDKLKIDRSFIKDLPQDADDAAITKTIISLCSSLN 545 Query: 598 TQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 +V A GV + + ++Q G QG ++ S+PL Sbjct: 546 LKVIAEGVETEKQKNFILQNGCQFIQGYYY--SRPL 579 >UniRef50_Q7MI32 C-di-GMP phosphodiesterase A-related protein n=40 Tax=Vibrio RepID=Q7MI32_VIBVY Length = 687 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 104/470 (22%), Positives = 198/470 (42%), Gaps = 32/470 (6%) Query: 190 EWPP-RTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLED 248 E PP + L L N + + ++ + A D TGL NR L L++ Sbjct: 207 ELPPGNNNDELGRLALSFHNLWQARAAAESQLNQLAYFDTLTGLANRSLLLKSLNETLKE 266 Query: 249 QEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSD 308 + G++ + L F ++D+ GH+ + T+ L ++ PG + AR + Sbjct: 267 SQSEQYPGVLFYLDLDRFKTINDSLGHTIGDNLMRTIAKRLEAWLQ--PGEIAARIGGDE 324 Query: 309 FAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIH----IGICAWR-SGQDTEQV 363 FA L+P ++A + A QL+ TL +N D ++ IGI + G + V Sbjct: 325 FAILIPKLNKEDAANKAKQLL----TLISNPYSIDDHQLYCTVSIGISTFADKGISSIDV 380 Query: 364 MEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE 423 + A++A A + G N + Y+ + + + + + L +G LY +P V + Sbjct: 381 LRQADTALYRAKVAGRNKYMFYEPEMQAQVESFLEIEKGLHEALHKGQLELYYQPQVNAQ 440 Query: 424 GQVHHRELMCRIFDGNEEV-SSAEYMPMVLQFGLSEEYDRLQISRLI---PLLRY--WPE 477 Q+ E + R + V +MP+ + G LQI I +Y W + Sbjct: 441 QQIIGVEALIRWNHPEKGVLPPGVFMPIAEETG-----QILQIGDWIIEQACFQYAQWKK 495 Query: 478 EN--------LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRL 529 E LAI ++ + F + L Q + + I +E+ E+ + +++ Sbjct: 496 EQVLPETFHRLAINISPLQFSKNAFVEHITHALKQANIT-GEHIELEITESLLLENVESA 554 Query: 530 QPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSL 589 + + L ++++++ G S ++K L V++LK+ V + +Q +V ++ Sbjct: 555 INKMAELKELDLKISIDDFGTGYSSLRYLKHLAVDVLKIDRSFVTQLHLDQSDQAIVSTI 614 Query: 590 VEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKK 639 + S +V A GV + E+ TL++ G QG F P++ +K Sbjct: 615 IMIAERLSLEVIAEGVETEEEFNTLVELGCEQFQGYLFGKPLPVEMITQK 664 >UniRef50_C1SGC5 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGC5_9BACT Length = 808 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 97/462 (20%), Positives = 212/462 (45%), Gaps = 29/462 (6%) Query: 186 GTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATL 245 G Y + +I+N ++ L+ + + D TGL NR N L T+ Sbjct: 367 GVSYVFSVNIQKIFSRYKHDIENRNKELEELNIELTNQLYTDHLTGLPNRNKLVNDLNTV 426 Query: 246 LEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYH 305 I++M+ + F +++T+G + + +S+F +Y ++H Sbjct: 427 --------DSPILIMLNIDSFKKINETYGFIIGDFVLIDVGERISSFDNKYDMKTY-KFH 477 Query: 306 RSDFAALLPH----RTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTE 361 +++A L+ TLK ++ +L + +D N K + + I I + A S + Sbjct: 478 GNEYAILIDSDIEGNTLK---TLVHELTEYLDF--NVKYEELEIEIDISVTAGVSAEKG- 531 Query: 362 QVMEHAESATRNAGLQGGNSWAIYDDSLP--EKGRGNVRWRTLIEQMLSRGGPRLYQKP- 418 + E A A R+A + + IYD S+ ++ ++RW ++++ L+ Y +P Sbjct: 532 NIFEKAGMALRHAD-KKKLPYTIYDSSIDIVDEYENDIRWTKIVKRALNENTLVPYFQPI 590 Query: 419 AVTREGQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE 478 A ++ G+V E + R+ D +E ++ +++ ++ + L + R I++ + + Sbjct: 591 ANSQTGEVEKFECLLRLIDHDEVITPFQFLDIIKKTKLYQHITRRIITKSFEMFT-SNDF 649 Query: 479 NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNA 538 +I +++E ++ +++ D L + R +I EL E++ + + I+ + Sbjct: 650 MFSINLSIEDVMDESTSKFILDLLKTSGIANR--VIFELLESEGIESFEVVNDFIKEIKK 707 Query: 539 LGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTST 598 G VA++ G + ++ EL V+++K+ L++NI+K T+ Q++V ++++ + + Sbjct: 708 TGAMVAIDDFGSGYSNFVYLSELQVDIIKIDGSLIKNIDKDTQAQIIVGTIIKFANQLNI 767 Query: 599 QVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 + A V S S +I+ G+ QG + QP N+ Y Sbjct: 768 KTVAEFVHSESVKLKVIEMGIDYIQG--YHIGQPT-ANIDSY 806 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 103/471 (21%), Positives = 206/471 (43%), Gaps = 50/471 (10%) Query: 192 PPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEK 251 P R + T ++ Q + + A D TGL NRL ++++ +E ++ Sbjct: 341 PIRDDDGVVTHFMAVKENITQRKETEQQLVHQATHDTLTGLPNRLLLEDRVHHAIEVAKR 400 Query: 252 VGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAA 311 G +M + L F +++D+ GH +E +++ L + R +AR +F Sbjct: 401 EGRRIGLMFLDLDRFKIVNDSLGHVAGDELLKVVSDRLRHTLRRSD--TVARLGGDEFVV 458 Query: 312 LLPH-RTLKEAESIAGQLIKAVDT---LPNNKMLDRDDMIH----IGICAW-RSGQDTEQ 362 +L H ++ E +A ++ A+D L +K +H IGI + G + Sbjct: 459 VLTHFQSTTELAEVAEKISAALDEPVELSGHK-------VHVGASIGIAIYPDDGDNFNA 511 Query: 363 VMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT- 421 +M+ A++A A +G N++ YD ++ ++ ++ + + L RG +L+ +P V Sbjct: 512 LMKDADTAMYRAKQKGRNTFCFYDSNMNDEALDRLKLEEALRRALVRGEFQLFYQPQVDL 571 Query: 422 REGQVHHRELMCRIFDGNE--EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN 479 + G+ E + R ++ E +VS A ++P ++EE S LI ++ +W E Sbjct: 572 QTGRTSGVEALIR-WNSPERGQVSPALFIP------VAEE------SNLISMIGWWVLEE 618 Query: 480 LAIQVT---------VESLIRPRFQRWLRDTLMQCEKSQR-------KRIIIELAEADVG 523 Q+ ++ + +++L L++C ++ IEL E+ V Sbjct: 619 SCRQIAAWREAGLTGIKVAVNVSGRQFLNHALVECISDLMAQYAVLPSQLEIELTESTVM 678 Query: 524 QHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQ 583 R + + +G++V+V+ G S S++K L + +K+ VR++ +++N Sbjct: 679 AEPDRAIEQLTRLREIGIQVSVDDFGTGYSSLSYLKRLPLSTIKVDRSFVRDVNNQSDNA 738 Query: 584 LLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLD 634 +V +++ + A GV + E Q L G QG +A P D Sbjct: 739 AIVSAILGLADALDMSIVAEGVETEGEEQHLKDAGCIKVQGFRYAKPMPAD 789 >UniRef50_B8KKA6 Putative uncharacterized protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KKA6_9GAMM Length = 827 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 101/428 (23%), Positives = 191/428 (44%), Gaps = 28/428 (6%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 + S A D TGL NR F+++L L + E+ G H + I + F ++D++GH+ + Sbjct: 370 LESIANFDTLTGLVNRQLFEDRLEQSLANCERRGNHLALAYIDIDSFKHINDSYGHTAGD 429 Query: 280 EQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLP-- 336 + + N + + LAR +F AL+ L + E + +L++A TLP Sbjct: 430 DYLIGIANNMQLALRDTD--TLARIGGDEFIALITDLERLDDLEPVTQRLLEAA-TLPVM 486 Query: 337 -NNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGR 394 N++ L IGI + G+D +++ A+ A A QG ++D R Sbjct: 487 VNDRQLTGS--ASIGIARYPLDGEDAGRLIRCADQAMYEAKQQGKRRLHVFD-------R 537 Query: 395 GNVR---WRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGNEEV-SSAEYMP 449 G +R R +E L G L +P + G++ E + R + AE++P Sbjct: 538 GLLRVSASRDNVEAALDSGEFELLYQPKINLISGELVGFEALARWNHPQRGLLQPAEFLP 597 Query: 450 MVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVE----SLIRPRFQRWLRDTLMQC 505 ++ + L E+ + + + + + N+++ ++V L + F + + Sbjct: 598 LIDRENLQLEFGDWVLDQAVKQIESGLQSNISLPISVNIAGVHLRQTDFVESIASKMQAV 657 Query: 506 EKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVEL 565 + + IE+ E +S + +I NALG+ +++ G S + ++ L V Sbjct: 658 GSMGPQLLEIEILETSALDDLSAVAGIISSANALGISFSLDDFGTGFSSLTHLRRLPVST 717 Query: 566 LKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGD 625 +K+ VR++ + E+ +V S+V C G + +V A GV S + + LI GQG Sbjct: 718 VKIDTSFVRDMLESEEDFAIVSSIVSLCRGLNRRVVAEGVSSVAHAKALIGINCIYGQG- 776 Query: 626 FFASSQPL 633 F ++P+ Sbjct: 777 -FGIARPM 783 >UniRef50_Q07XP4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q07XP4_SHEFN Length = 829 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 87/424 (20%), Positives = 186/424 (43%), Gaps = 21/424 (4%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A D T L NR+ ++L+ GT ++I + F L+D+ GH +E Sbjct: 393 ANHDQLTDLPNRILLQDRLSVACSTARSYGTKAAALLIDIDHFKFLNDSLGHQYGDELIC 452 Query: 284 TLTNLLSTFMMRYPGAL-LARYHRSDFAALLPH-RTLKEAESIAGQLIKAVD---TLPNN 338 + L + + P + LAR +F L+ R+++ + +A L++A+ L N Sbjct: 453 MMARRLRSLI---PASYTLARLGGDEFVILMSETRSVEASSQLASTLVEAMHEPFVLDNQ 509 Query: 339 KMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNV 397 K + I IG+ + D E++M HA+ A A +G N + + L Sbjct: 510 KF---NVSISIGVSVFPNDAVDAEELMRHADVAMYRAKQEGRNRFCFFSHDLESSLMERH 566 Query: 398 RWRTLIEQMLSRGGPRLYQKPAVTREGQVH-HRELMCRIF-DGNEEVSSAEYMPMVLQFG 455 T + + L ++ +P + + + E + R+ D E +S AE++P+ + G Sbjct: 567 HLETRLRKALINDELFVHYQPKIDLQTNIIIGAEALVRLANDEGELISPAEFIPLAEESG 626 Query: 456 LSEEYDRLQISRLIPLLRYWPEEN----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRK 511 L + +++ + W E +++ V P ++ L+ Sbjct: 627 LIIMLGKQVLNKACAEAKRWLEMGHTIPISVNVAAAQFADPDLAGMIKKALLD-HNLPAH 685 Query: 512 RIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPG 571 + +E+ E + + +Q + + +LG+++A++ G S +++K+ NV+++K+ Sbjct: 686 LLELEITETALMIDAADMQNKLSELISLGIKIAIDDFGTGYSSLAYLKKFNVDVMKIDMS 745 Query: 572 LVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQ 631 V+++ + +V++++ + A GV ++ + L++ G GQG F S+ Sbjct: 746 FVKDMLNNKHDYEIVKTIISLGKSMGLVLIAEGVETKEQSHALVELGCFMGQGYLF--SR 803 Query: 632 PLDT 635 PL++ Sbjct: 804 PLNS 807 >UniRef50_Q474K3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=cellular organisms RepID=Q474K3_RALEJ Length = 968 Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 115/456 (25%), Positives = 195/456 (42%), Gaps = 39/456 (8%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLED-QEKVGTHGIVM 259 +L +I++ RE +RL A+ D TGL NR F+ +LA + + GTH + M Sbjct: 506 VVLHDIRHEREHAARL----AHEASHDALTGLVNRTEFERRLAAAIARVRVTSGTHAL-M 560 Query: 260 MIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK 319 + L F +++DT GH+ +E + ++ + + G LAR +F LL H Sbjct: 561 YLDLDQFKVVNDTCGHAAGDELIRQMAAVMRAQLRK--GDTLARLGGDEFGILLEHCPAP 618 Query: 320 EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTE-----QVMEHAESATRNA 374 +AE IA L +AV + R +G+ D + + M A++A A Sbjct: 619 DAERIAESLRRAVAGF---RFTHRQRTFAVGVSIGLVALDGDTGGVAEAMSAADAACYVA 675 Query: 375 GLQGGNSWAIY--DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVH---HR 429 G N +Y D++ + G + W + + L+ G LY++ V GQ H Sbjct: 676 KENGRNRVQVYHPQDTVVQARHGEMEWVSRVHAALAAGRFCLYEQEIVPLNGQRQGGKHV 735 Query: 430 ELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLL---RYWPEENLA---I 482 EL+ R+ D N+ V ++P ++ L DR + L R E++A I Sbjct: 736 ELLLRMVDERNQLVPPMAFVPACERYNLMPMIDRWVVETAFVTLAQRRAESAEDIALCAI 795 Query: 483 QVTVESLIRPRFQRWLRDTLMQCEKSQR-----KRIIIELAEADVGQHISRLQPVIRLVN 537 ++ SL RF ++R E++QR I E+ E ++++ I + Sbjct: 796 NLSASSLADVRFPTFIR------EQAQRTGVALSGICFEITETAAISNLAQAAAFIEQMQ 849 Query: 538 ALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTS 597 ALG A++ G + S ++K L LK+ VR + + NQ++V+ + Sbjct: 850 ALGCVFALDDFGAGMASFIYLKHLPAAYLKIDGSFVREMLEDPVNQVMVEVIQRIGHAMG 909 Query: 598 TQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 + A V + +E L + GV QG A P Sbjct: 910 KKTIAEHVETEAELARLRELGVDLVQGHHIAPPVPF 945 >UniRef50_C5V4D1 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D1_9PROT Length = 632 Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 102/444 (22%), Positives = 201/444 (45%), Gaps = 25/444 (5%) Query: 194 RTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVG 253 R A++++ ++ E R T R + +D+ TGL+NR F+ + LLE+ + Sbjct: 191 RVVKAINSMSVKLFAIIEHEVRQATRYRDESRRDLLTGLDNRRGFEQHVHALLENGADM- 249 Query: 254 THGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGA--LLARYHRSDFAA 311 G + ++++ DFN + G+ + L ++ + +P + L R + FA Sbjct: 250 VSGSMFLLQVADFNAYNVKNGYKDGDA---LLKDVAAGLRGVWPDSELLRCRINGPTFAV 306 Query: 312 LLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICA-WRSGQD-------TEQV 363 + + T +A + L A+ T N + + ++ G + +GQ ++ Sbjct: 307 MAFNITRDQAVQLGDALCVALGTAVGN--IGSEPRLNYGCGGVYFAGQKVTLNALLSQCD 364 Query: 364 MEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE 423 ME +S ++ AGL + + D+ EK +G+ W+ LI ++ L +P + Sbjct: 365 MELLQSISQGAGLSQLQN--LRDE---EKVKGSQYWKELILDAIAAERVMLLAQPVMYFG 419 Query: 424 GQVH-HRELMCRIFDGNEEVSSAE-YMPMVLQFGLSEEYDRLQISRLIPLLRY-WPEENL 480 G++ E++ R+ + E+ AE ++PM ++ L+ +D + RL ++ +E + Sbjct: 420 GELKLQSEVVGRLINPEGEMVLAEHFIPMANRYQLTPAFDLSVLKRLFGRMQASGGDELV 479 Query: 481 AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALG 540 AI ++ S+ WL T M + +R++ E E + Q ++ + + LG Sbjct: 480 AINFSIHSIHDVELLSWL-STAMHAHPAVARRLVFEFTEFGIVQDRVGIENFVADMRKLG 538 Query: 541 VRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQV 600 + AV+ GL + +++ L +KL P +RN+ ENQ + S+V +V Sbjct: 539 GQFAVDNFGLHHSAFEYLQRLKPLYVKLSPAYIRNLHGNLENQFFISSVVNITRSLDIRV 598 Query: 601 YATGVRSRSEWQTLIQRGVTGGQG 624 +A GV S L + G+ G QG Sbjct: 599 FALGVEDVSVLPLLQELGIEGYQG 622 >UniRef50_Q2SJ14 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=2 Tax=Gammaproteobacteria RepID=Q2SJ14_HAHCH Length = 559 Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 118/465 (25%), Positives = 200/465 (43%), Gaps = 53/465 (11%) Query: 199 LDTLLREIQNA--REQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHG 256 L + RE++ A R+ R + + A D T L NR F+ +L + L ++ G Sbjct: 114 LPAIQRELKEATVRDARKRAERTLHHMAYHDSLTDLVNRREFERRLKSALNSSKERGLTH 173 Query: 257 IVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR 316 +++ + L F +++DT GH +E L LLS + LAR +F LL Sbjct: 174 MLLYLDLDQFKIINDTCGHVAGDELLKQLAILLSKHIRE--SDTLARLGGDEFGILLESC 231 Query: 317 TLKEAESIAGQLIKAVDTL-------PNNKMLDRDDMIHIGICAWRSGQDT-EQVMEHAE 368 + A +A +L V P L IGI A S + +++ HA+ Sbjct: 232 AERRAIQLAQELNSEVRNFRFVWQQKPFTISLS------IGIVAVTSEYGSGAEILSHAD 285 Query: 369 SATRNAGLQGGNSWAIY--DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV---TRE 423 A A +G N+ +Y DD + R ++W + I L LYQ+P Sbjct: 286 IACYAAKDKGRNTIQVYQSDDVEMMRRRTEMQWISRIRIALEENRFFLYQQPMERIGPDR 345 Query: 424 GQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLL-RYWPEENLA- 481 G H E + R+ +G+E + ++P ++ L DR R+I L+ +Y E Sbjct: 346 GAGLHTEFLLRLREGDEVIPPGAFIPAAERYSLMPLIDR----RVIELVFQYLAESGKGM 401 Query: 482 -------IQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIR 534 I ++ SL + +R L + K + +RI E+ E H++ IR Sbjct: 402 ADKGAYFINLSGASLSDDKVFEDIRKNLRKY-KIRPERICFEITETAAIAHLAETVEFIR 460 Query: 535 LVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACS 594 + G + A++ G + S S++K + V+ LK+ VRN+ + + +VEAC+ Sbjct: 461 EIREEGFKFALDDFGCGMSSFSYLKTIPVDYLKIDGSFVRNM----LSDPIDVGIVEACN 516 Query: 595 GTSTQVYATGVRSRSEW-------QTLIQRGVTGGQGDFFASSQP 632 +A G+ + +E+ + LI+ GV QG FA S+P Sbjct: 517 RIG---HAAGLTTIAEFVENEQIKEKLIEIGVDYAQG--FAVSKP 556 >UniRef50_Q7MQJ2 GGDEF family protein n=2 Tax=Vibrio vulnificus RepID=Q7MQJ2_VIBVY Length = 753 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 95/445 (21%), Positives = 195/445 (43%), Gaps = 21/445 (4%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 TL +++Q+A EQ + ++ A D+ TGL+NR F + L +L+ + + ++ Sbjct: 307 TLPKKLQHAVEQKT---FQLKKLANTDMLTGLDNRRKFTDVLNQILQKPDALAHCHALLY 363 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE 320 + + +F ++D GH ++ + L + + R +FA LL ++ + Sbjct: 364 LDIDNFKQINDQLGHYVGDQVLKVVAQRLCHHVSDAQS--ITRISGDEFAVLLEYQEIDS 421 Query: 321 AESIAGQLIKAV----DTLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAG 375 ++ LI A+ + +PN+ L + IG+ + GQD +M+H + A A Sbjct: 422 LKARLSALIVALSQPSEHIPNSHRL----TVSIGVVLIPQDGQDLTLLMQHVDFAMYQAK 477 Query: 376 LQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCR 434 QG N + +D + + ++ ++ + + L+ +P R Q+H E + R Sbjct: 478 SQGRNQYCFFDRLMKLRDDEKIQLIESLKIAIEQNQFVLHYQPIYDIRSHQIHCYEALIR 537 Query: 435 IFDGNEEV-SSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN--LAIQVTVESLIR 491 + + A ++ + Q GL E +++ + +E ++I ++ L Sbjct: 538 WQHPTKGLLFPASFIELAEQSGLINEIGDCVLAQACQFIAQTAQEKPIVSINISASQLSD 597 Query: 492 PR-FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGL 550 P+ F+R++ ++Q + EL E + Q+I ++ LG+++A++ G Sbjct: 598 PQLFERFI--GIIQQYGVDAHSLKFELTETTLMQNIQSCTNILLKFKQLGIQIAIDDFGT 655 Query: 551 TLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSE 610 S + +K++ LK+ + I T +Q + QS++ QV A GV + Sbjct: 656 GYSSLAVLKDVPANYLKIDKSFIDQINSNTGDQKVAQSIITLAHHLDMQVIAEGVEQIEQ 715 Query: 611 WQTLIQRGVTGGQGDFFASSQPLDT 635 + L Q GQG F P+D+ Sbjct: 716 EELLAQFQCDFGQGYLFGRPAPVDS 740 >UniRef50_A2V149 Diguanylate cyclase n=1 Tax=Shewanella putrefaciens 200 RepID=A2V149_SHEPU Length = 477 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/289 (23%), Positives = 135/289 (46%), Gaps = 23/289 (7%) Query: 199 LDTLLREIQNAREQ-HSRLDTL------IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEK 251 L+ L + +++ R Q +LDTL + A QD TG +R F N+L T+ + Sbjct: 188 LNPLKQALEDCRHQLKVQLDTLTQENEKLHKVAYQDPITGFASRPRFTNKLETI--NNPD 245 Query: 252 VGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAA 311 + G+++M++ + ++ G S ++ + N + +YP A R +DFA Sbjct: 246 IPQFGLMVMVKATELANINQHQGRSAGDDYLARVANCIRKTCTKYPDAQCYRVSSADFAV 305 Query: 312 LLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESAT 371 +P LK+ +L +D +M + + HIG+ ++ G + ++ A++A Sbjct: 306 FIPDTVLKDGPKFLDELKVYLDEY--QQMTKTESVAHIGLVPYQQGVEAIHLLTLADTAV 363 Query: 372 RNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVH-HRE 430 A G NS+ I + + G+ RW+ I ++SR + YQ+P ++ +RE Sbjct: 364 SIAQTLGPNSYHIQEKLDGNEQFGDDRWKLAIHDLISRKALKFYQQPIQPCRTEIEVYRE 423 Query: 431 LMCRIFDGNEEVSSAEYMP------MVLQFGLSEEYDRLQISRLIPLLR 473 L+ R ++ S +++P M + G+S E D+L + + +L+ Sbjct: 424 LLARFYN-----SEGKFLPTTTVIAMAERHGMSTELDKLVVISALKMLK 467 >UniRef50_Q3J9L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3J9L4_NITOC Length = 811 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 107/438 (24%), Positives = 192/438 (43%), Gaps = 23/438 (5%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 I A D TGL NR F+++L +L + + L F +++DT GH + Sbjct: 383 ITHQATHDSLTGLVNRREFEHRLERVLATLKAESAEYALCYFDLDRFKVINDTCGHVAGD 442 Query: 280 EQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNK 339 E ++ +L + + LAR +F LL H +LK+A+ +A + KA++ + Sbjct: 443 ELLRQVSEVLRGQIRKRD--TLARLGGDEFGVLLEHCSLKQAQRVATAIHKAIEDF---Q 497 Query: 340 MLDRDDMIHIGICAW-----RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKG- 393 IG+ ++ V++ A++A A +G N +Y ++ E Sbjct: 498 FTWEGKSFRIGVSIGLVPITKASMGIAVVLKAADTACYAAKNKGRNRIHVYHETDKELAS 557 Query: 394 -RGNVRWRTLIEQMLSRGGPRLYQKPAV--TREGQVHHRELMCRIFDGNEEVS-SAEYMP 449 RG V+W T I + L ++Y +P + E + E+ R+ DG V ++P Sbjct: 558 HRGEVQWMTRIHRALKENYFQVYFQPIIPLATEKEEKCYEVFLRLEDGAGGVVLPGAFLP 617 Query: 450 MVLQFGLSEEYDRLQISRLIPLLRYWPE--ENLAIQVTVESLIRPRFQRWLRDTLMQCEK 507 ++ L+ + DR I+ L PE I ++ SL R + +L + Q EK Sbjct: 618 TAERYNLAVKIDRWMIANTFTWLAQNPEPLRTCFINLSGHSL---RNKTFLAFIIEQLEK 674 Query: 508 SQ--RKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVEL 565 + +I E+ EA ++S I+ + + G + +++ G +L S +++K L V+ Sbjct: 675 TPIPSIQICFEITEAAATANLSCTIRFIKSLKSHGCKFSLDDFGSSLSSFAYLKNLPVDF 734 Query: 566 LKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGD 625 LK+ V++I + +V+S+ E Q A V + L + GV QG Sbjct: 735 LKIDGLFVKDILDDPIDLAIVRSINEIGQIMKKQTIAEWVEKEEVLEKLREIGVNYAQGY 794 Query: 626 FFASSQPLDTNVKKYSQR 643 + QPL T +K +R Sbjct: 795 WINPPQPL-TEMKSPQKR 811 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 104/446 (23%), Positives = 195/446 (43%), Gaps = 35/446 (7%) Query: 205 EIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLP 264 +I N + +R+++L A DV TGL NR D + L E+ VM + L Sbjct: 417 DITNQKNAQARIESL----AHFDVLTGLPNRALLDERAQRALRLAEEDQATLAVMFLDLD 472 Query: 265 DFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESI 324 F ++DT GH+ + L L + R L+R +F LLP + A+ I Sbjct: 473 HFKNINDTLGHNLGDTLLVELAQRLRAVLRR--DDTLSRLGGDEFVLLLPGANRESAKKI 530 Query: 325 AGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWA 383 A +L++A++ + + M IGI + + G D E + ++A+ A A +G N++ Sbjct: 531 AQELMRAINEPYRIGSHELNVMASIGIAVYPADGMDFETLCKNADVAMYRAKQEGRNAYR 590 Query: 384 IYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQV---------HHRELMC 433 + + ++ + Q +++ ++ +P ++ G V HH EL Sbjct: 591 SFTQEMQAYSTRYLQVLNALRQAIAQEQLHVHYQPQISLISGDVIGAEALLRWHHPEL-- 648 Query: 434 RIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPR 493 GN +S AE++P+ + GL + + + + W + L + +L + Sbjct: 649 ----GN--ISPAEFIPIAEESGLILQIGEWVLRVAVAQAKKWHQLGLDKLIIAVNLSAVQ 702 Query: 494 FQR-WLRDTLMQCEKSQR---KRIIIELAEADVGQHISRLQPVIRLVNAL---GVRVAVN 546 F+ L + +MQ K + + + +EL E G + Q I ++N+L GVR++++ Sbjct: 703 FRHAGLPNLVMQILKEEDFPPQYLELELTE---GVAMHDPQGAIAMMNSLHERGVRMSID 759 Query: 547 QAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVR 606 G S S++K+ LK+ VR+I E++ +V +++ Q A GV Sbjct: 760 DFGTGYSSLSYLKQFKAYKLKIDQSFVRDISTDAEDKAIVSAIIGMAKNLGLQTIAEGVE 819 Query: 607 SRSEWQTLIQRGVTGGQGDFFASSQP 632 + + L + G QG ++ P Sbjct: 820 TAEQQAFLREEGCHEAQGYHYSKPLP 845 >UniRef50_Q2Y8Q9 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y8Q9_NITMU Length = 703 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 86/385 (22%), Positives = 162/385 (42%), Gaps = 20/385 (5%) Query: 253 GTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRY-----PGALLARYHRS 307 GT GI +IRL + ++ G + E + +L++ + L AR + S Sbjct: 322 GTRGIFFLIRLNNLEEINRKLGRAGANELLHRVGSLIAGITGEFEEITSSPPLAARLNGS 381 Query: 308 DFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHA 367 DFA L P ++ A A +L + + LP D HIG +R G +++ A Sbjct: 382 DFALLAP--DIRNAAKFARRLSEELAALPLRDGDKIADFCHIGAVPYRRGDTLSELLSRA 439 Query: 368 ESATRNAGLQGGNSWAIYDDSLPEKGRGN------VRWRTLIEQMLSRGGPRLYQKPAVT 421 ++A A G N+W + + P G+ + WR + L+ L P + Sbjct: 440 DAALATAEQTGANAWHL---AAPSSGQTSPVSLNISDWRHIFSDALTANRFMLAFHPVID 496 Query: 422 REGQVHHRELMCRIFDGNEE--VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN 479 G V H+E + R+ E + +++++ + + ++ D + + L+ E Sbjct: 497 PTGAVLHQESVARMQAQPEGGWLEASDFISIAARLNITGPIDVAVLRHALEFLQSNTGE- 555 Query: 480 LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNAL 539 +A+ +++E++ RF+ L D L+ +R+ IE++E + + + L Sbjct: 556 VAVDLSIETVANYRFRNKL-DALLHPHPELCRRLWIEVSEYGAFRKFEAFRDFCHIFRQL 614 Query: 540 GVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQ 599 G V + G L S + + LK+ + I + NQ +++L E + Sbjct: 615 GCHVGIRDFGRHLDSIQSLAGAGLSYLKVTDRFIHRINQNKTNQKFLKNLCEQAHALGMK 674 Query: 600 VYATGVRSRSEWQTLIQRGVTGGQG 624 V A GV++ E + LI+ G G G Sbjct: 675 VIALGVQNEVERKALIKLGFDGLAG 699 >UniRef50_D0L1D4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1D4_HALNC Length = 958 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 107/454 (23%), Positives = 193/454 (42%), Gaps = 49/454 (10%) Query: 209 AREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNM 268 A Q + D IR A +D TGL+NR F +L+ L + G +++I L F Sbjct: 509 AEVQQIKADQHIRQLAYEDYLTGLSNRALFHQRLSQTLAEARSSMHLGALLLIDLDHFKT 568 Query: 269 LSDTWGHSQVEEQFFTLTNLLSTFMMRYPGA-----LLARYHRSDFAAL--LPHRTLKEA 321 ++D GH ++ +L +R A LLAR+ +F AL L + A Sbjct: 569 INDALGHDVGDD-------VLKAVAIRTKEATDEKTLLARFGGDEFVALMLLDTTVIDTA 621 Query: 322 ESIAGQLIKAV-DTLPNNKMLDRDDM---IHIGICAWRSGQDTE-QVMEHAESATRNAGL 376 E +A + K + D L ++ D IG+ + +TE ++ HA+ A A Sbjct: 622 EQLASKTAKHILDALKAPLSVNGRDFSVGASIGVVVFPQENETELDILRHADMALYKAKK 681 Query: 377 QGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQV---------H 427 G N+ +++ SL ++ + + L +P V +G H Sbjct: 682 HGRNNVQLFNPSLQIAATTRLKLEEGLRAAVGNNELSLNYQPQVNIDGCCIGVEALLRWH 741 Query: 428 HRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE------NLA 481 H EL VS E++P+ + GL + + L W E ++A Sbjct: 742 HPELGV--------VSPDEFIPIAEETGLIHPIGLWVLEQACKDLSRWHENGIPFQGHMA 793 Query: 482 IQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRL--VNAL 539 + V+ LI F ++ + Q KRI++E+ E+ + +R + + +L + L Sbjct: 794 VNVSPWQLISTNFVNEIKQIVEQYPLDP-KRIMLEVTESTLLH--NRYESIAKLEQLRHL 850 Query: 540 GVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQ 599 G +++++ G S S++K++ ++ LK+ + +EK + Q L+ S+ Sbjct: 851 GFKISLDDFGTGYSSLSYLKDIPLDQLKIDKSFIDELEKTDDEQPLLASIYAIGIHMHLA 910 Query: 600 VYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 + A GV ++++ + LI G QG F S+PL Sbjct: 911 IIAEGVETQNQCERLISMGGKAFQGYLF--SKPL 942 >UniRef50_Q2BCE5 Putative uncharacterized protein n=3 Tax=Bacillus RepID=Q2BCE5_9BACI Length = 744 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 111/496 (22%), Positives = 219/496 (44%), Gaps = 45/496 (9%) Query: 163 AGQELLETRATRILNGERGSNVLGTIYEWPPRTSS--ALDTLLREIQNAREQHSRLDTLI 220 AG+ E +A R+ G V + P R A+ + R+I ++ ++ + Sbjct: 268 AGKRRFEVQAKRL----DGVLVDVEVSSMPIRYGGREAVQVIGRDITERKKSERTMEYM- 322 Query: 221 RSYAAQDVKTGLNNRLFFDNQLATLLED-QEKVGTHGIVMMIRLPDFNMLSDTWGHSQ-- 277 A D TGL NR QL +L +EK V+ + L F +++DT GHS Sbjct: 323 ---AFYDTLTGLPNRNEIMKQLQGILNSGKEKAA----VLFLDLDRFKIINDTKGHSTGD 375 Query: 278 --VEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTL 335 +++ L + + + L+AR +F L KE + I G ++ Sbjct: 376 LLLKKAGIRLEDTVGSL------GLVARQGGDEFIILFEE---KEKQQIEGAARAIIEQF 426 Query: 336 PNNKMLDRDDMI---HIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPE 391 +L+ ++ IGI + G D E +++HA++A A +G N++ Y SL Sbjct: 427 NKPFILEGEEFYITPSIGISLYPEHGTDQETLIKHADTAMYLAKERGKNNFQFYTSSLEG 486 Query: 392 KGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRI--FDGNEEVSSAEYM 448 + + + L RG L+ +P + + G++ E + R DG+ V E++ Sbjct: 487 LASRKMALENGLRKALDRGELLLHYQPQIDLKTGKLKGTEALVRWQRPDGH-LVPPGEFI 545 Query: 449 PMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLM 503 P+ + GL + + + W E +A+ ++V L P F +++ L Sbjct: 546 PLAEETGLIVPMGKWILRTACEQHKRWKLEGAGSVPIAVNISVRQLEDPEFIMYVKTVLS 605 Query: 504 QCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNV 563 C+ + + +E+ E+ + Q+I + + + +G+R++++ G S S++K L + Sbjct: 606 SCD-IEPGCLELEITES-IMQNIEKATIALNELKKIGIRLSIDDFGKGYSSLSYLKHLPI 663 Query: 564 ELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQ 623 + +K+ V +I +N LV+++++ + V A G+ + + + L++ GQ Sbjct: 664 DTIKIDKSFVDDILDPAQNGSLVKAIIDMGLNLNFSVVAEGIEHKEQAEFLLENNCPVGQ 723 Query: 624 GDFFASSQPLDTNVKK 639 G +F S+P+ V K Sbjct: 724 GYYF--SRPVTGEVFK 737 >UniRef50_C9R830 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ammonifex degensii KC4 RepID=C9R830_AMMDK Length = 469 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 95/423 (22%), Positives = 184/423 (43%), Gaps = 16/423 (3%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 +R A D TGL NR + +L L + + G G ++ + L +F +++DT GH + Sbjct: 45 LRFLATHDFLTGLPNRYLLEARLKKALA-RARRGHQGALLFLDLDNFKLVNDTLGHGAGD 103 Query: 280 EQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNK 339 + LL + + G LLAR +FA LL L+EA ++A +L + VD P Sbjct: 104 RALRFVVELLRRNLRK--GDLLARVGGDEFAVLLEGVELEEARAVAERLRQVVDETP--V 159 Query: 340 MLDRDDM---IHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIY--DDSLPEKGR 394 ++D + IGI D ++ + A++A A +GGN+ + + Sbjct: 160 VIDGHTFNLGLSIGITPLDGKMDVQKALGRADAALYAAKERGGNACVVVGPGEDPAAASS 219 Query: 395 GNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRI-FDGNEEVSSAEYMPMVL 452 W I+ L + G L +P V+ + ++ + E + R+ + + ++P+ Sbjct: 220 AASYWLGQIKSALRKEGFVLLFQPVVSVGDARIIYYEALLRMRAEDGSLIPPGSFIPVAE 279 Query: 453 QFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKR 512 +FGL + D + + +LR P+ L + ++ S+ + + + + + R+ Sbjct: 280 RFGLMPQIDCWVVRTAVKVLRGNPDLKLFVNLSGASVGDEKVLECITRAVAESGINPRQ- 338 Query: 513 IIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTS---WIKELNVELLKLH 569 + E+ E V + R + + + LG R A++ G S S + E ++ LK+ Sbjct: 339 LGFEITETAVAKDFERARGWLAELRNLGCRFALDDFGTGYSSFSLFGLLAEDFLDYLKIA 398 Query: 570 PGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFAS 629 VR K+ + +VQ++ + + A V + + + + GV QG + Sbjct: 399 GPFVREAVKKPSFKSVVQAMTTVAAAFGKETVAEWVEDEAAFTLVKEVGVDHVQGFYLGE 458 Query: 630 SQP 632 QP Sbjct: 459 PQP 461 >UniRef50_A4XNW2 Diguanylate cyclase/phosphodiesterase n=22 Tax=Pseudomonas RepID=A4XNW2_PSEMY Length = 557 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 111/461 (24%), Positives = 200/461 (43%), Gaps = 28/461 (6%) Query: 188 IYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLE 247 + +W R S LD L R ++ REQ + TL R A QD TG+ NR F LA L Sbjct: 89 VSDWLVRGSLNLDVLRRCLRYVREQGNLRQTLQR-LAEQDPLTGIANRQGFQTLLAARLA 147 Query: 248 DQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRS 307 + G ++ + L +F +D G+ + + L + + P +AR Sbjct: 148 ECNGRGL--VLGHLDLDNFRHANDALGYQAGDRLILQVVARLKSLLQ--PCDQIARLGSD 203 Query: 308 DFAALLP-HRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMI---HIGICAWRSGQDTEQV 363 +FA LL R ES+A ++ + L +D + ++ +G+ R+G+ + + Sbjct: 204 EFALLLDVRRDPLRVESLAERI---TEVLAEPYWVDGESLLIGCSLGLAHARAGEGADPL 260 Query: 364 MEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-R 422 + HA A + A Q G + +YD+ L R + + L R L+ +P + + Sbjct: 261 LWHAHIAMQQAKSQQGCVFHVYDERLNRSARSQADLEGELRRALRRDELELHYQPRLCLQ 320 Query: 423 EGQVHHRELMCRIFDGNEEV-SSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW-----P 476 G++ E + R G + S E++P+ + GL ISR + +++ P Sbjct: 321 SGRIVGLEALVRWQHGERGLLSPNEFVPLAEETGLIVPLGYWVISRALRDMQWLRGRGLP 380 Query: 477 EENLAIQVTV----ESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPV 532 ++AI ++ +S + P R L++ + + EL E V + ++Q Sbjct: 381 ALHMAINLSFRQFQDSQLLPTLSR-----LIEERGVDAQWLEFELTETAVMRRSDQVQQT 435 Query: 533 IRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEA 592 + + LGVR +++ G S + L + LLK+ V + R EN+ LV++++ Sbjct: 436 MLALGRLGVRFSLDDFGTGFSSFVHLNSLPITLLKIDRSFVGGMGARAENRQLVRAMINL 495 Query: 593 CSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 + +V A GV + + L Q G QG + + PL Sbjct: 496 AHNLNLEVVAEGVENIEQLDMLRQFGCDQVQGYLISKAVPL 536 >UniRef50_A6SZI8 Uncharacterized conserved protein n=3 Tax=Oxalobacteraceae RepID=A6SZI8_JANMA Length = 876 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 106/437 (24%), Positives = 193/437 (44%), Gaps = 42/437 (9%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 I A D+ T L NR F N L T +E + ++ L F ++DT GH + Sbjct: 439 IEYQAMHDMLTDLPNRRFLVNTLNTAMETSRLRQSSLTMLFCDLDFFKSVNDTHGHDFGD 498 Query: 280 EQFFTLTNLLSTFMMRYPGA-LLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNN 338 + ++ + T + P A +AR+ ++F +L + +L EA A ++ AV + Sbjct: 499 QCLIEISKRIVTAL---PTADFVARFGGNEFV-ILTNSSLAEATIKANTIMAAV-----S 549 Query: 339 KMLDRDDMI-----HIGICAWRSG-QDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK 392 + L D+++ IGI +G Q ++ A++A A +G N IYD +L K Sbjct: 550 ERLIFDNVVVKIQTSIGIAQLNAGHQSPADLIRDADAAMYQAKERGRNRTEIYDAALQSK 609 Query: 393 GRGNVRWRTLIEQMLSRGGPRL-YQKPAVTREGQVHHRELMCR-------IFDGNEEVSS 444 + R + L R + YQ + +G V EL+ R + NE + Sbjct: 610 TTKHARMDVALRFALERNELSVAYQPKVLLADGSVQGFELLLRWNSPEYGLISPNEFIPI 669 Query: 445 AEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE---NLAIQVTVESLIRPRFQRWLRDT 501 AE MV+ G+ + +L + +PE +AI V++ L++ F +RD Sbjct: 670 AETSGMVVPIGMWAMEQACK--QLAAWQQQYPEMGSLTMAINVSMRQLLQTSFFSQVRDI 727 Query: 502 LMQCEKSQRKRIIIELAEADVGQHISRLQPV-----IRLVNALGVRVAVNQAGLTLVSTS 556 L +I ++ E ++ + + P+ + ++ LGVR+A++ G S + Sbjct: 728 L------NSSGVIPQMVELELTETSAMANPLQTMENLSMLKKLGVRLALDDFGTGYSSLA 781 Query: 557 WIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQ 616 ++++L +++LK+ VR I + +++ ++ + Q A GV + + Q L + Sbjct: 782 YLQKLPIDILKIDKAFVRGIGSNQSDTEIIRLMMALAQTLNLQTTAEGVETFEQIQELKK 841 Query: 617 RGVTGGQGDFFASSQPL 633 G GQG F S PL Sbjct: 842 MGCNLGQGFLF--SAPL 856 >UniRef50_A6D0T4 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D0T4_9VIBR Length = 934 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 111/467 (23%), Positives = 210/467 (44%), Gaps = 47/467 (10%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 L +I +EQ +L+ L A D T L NR +++ LL+ E G + V+ Sbjct: 485 ALFTDISRLKEQEKQLELL----ALYDPLTKLPNRNLLVTKVSELLKFNE-FGRYMAVLF 539 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGA-LLARYHRSDFAALLPH-RTL 318 I L +F ++D++GH +E L L ST P +L R+ +F +L + R+ Sbjct: 540 IDLDEFKKINDSFGHEVGDE---ALKLLASTLSKNIPSNDILVRWGGDEFIIVLNNVRSE 596 Query: 319 KEAESIAGQLIKAVDTLPNNKMLDRDDMIH-------IGICAWRSGQ--DTEQVMEHAES 369 + +S A +L+ + T M + D+IH IG+ + D E ++ A+ Sbjct: 597 DKVKSYASKLLNIIST-----MRFKTDLIHPQPFSASIGVTMTEADSVTDIEHLIRQADL 651 Query: 370 ATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHH 428 A + LQGGNS + ++ R + +EQ +S LY +P + R ++ Sbjct: 652 AMYESKLQGGNSISFFNPEHDRSKRKRHAKKRQLEQAVSENELELYFQPKMNLRSNELIG 711 Query: 429 RELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQ-------ISRLIPLLRYWPEENLA 481 E + R ++ V + E QF E LQ +++ + + W + + Sbjct: 712 AEALLRWNHPDKGVLTPE------QFLFDIETPALQCEIGDWVMTQAVHQVSEWMKCGMD 765 Query: 482 IQVTVE----SLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVN 537 IQ+++ L F LR L Q K + IE+ E+ + + R Q VI Sbjct: 766 IQLSINVSSYQLDDINFTSRLRALLSQY-KVPPSYVQIEILESSALELVERAQAVIERCQ 824 Query: 538 ALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTS 597 + GV VA++ G + S++++L ++LK+ + ++K ++N L+++++ S Sbjct: 825 SFGVSVAIDDFGTGYSTLSYLRDLPADVLKVDKSFIIGLQKDSKNWGLLKAVMSLASTFD 884 Query: 598 TQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRY 644 V A G+ + L++ G QG +A ++P+ ++++++ Y Sbjct: 885 KTVVAEGLEDWDAKELLLEVGCEIAQG--YAIARPM--KIEQFNRWY 927 >UniRef50_A8UR98 Sensory box/GGDEF family protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UR98_9AQUI Length = 959 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 89/427 (20%), Positives = 191/427 (44%), Gaps = 11/427 (2%) Query: 209 AREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNM 268 A + S L+ L + A D TGL NR +++ + + + G+ ++ I L F Sbjct: 519 ANKAMSYLEEL-KKMAYFDPLTGLPNRTLLRDRIESAIHFANRNGSKVAILFIDLDYFKT 577 Query: 269 LSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQ 327 ++DT GH + + LS+ +AR+ +F A++P R LK+ +A + Sbjct: 578 VNDTLGHDVGDRILVQVAKRLSSVFRE--TDTVARFGGDEFVAVIPDVRDLKDVVQVAER 635 Query: 328 LIKAVDTLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYD 386 ++ T D +GI + +G++ +++++A+ A A +G ++++ + Sbjct: 636 ILSLFSTPFEANGEDIYLSASVGIAVYPDNGENPTELIKNADMAMYRAKEEGKSNFSFFT 695 Query: 387 DSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGNEE-VSS 444 + + K + + + + L RG LY +P + + + E + R D + VS Sbjct: 696 EEMNSKAVEILSVKNKLHKALERGEFLLYYQPIYSLGDNSIVGLEALLRWRDPDRGLVSP 755 Query: 445 AEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQ 504 A++MP++ + GL +E R + R W + I V+V R R ++Q Sbjct: 756 AKFMPILEELGLVKEVGRWVMGEAFKKSREWGDR-YGIYVSVNISPRQFMDRNFVKRVLQ 814 Query: 505 CE---KSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKEL 561 + + +++E+ E + ++ +++ + A G +VAV+ G S +++K L Sbjct: 815 IASDTNANNEHVVLEITETSLMRNPEESVSILKRLRAKGFKVAVDDFGTGYSSLAYLKRL 874 Query: 562 NVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTG 621 ++++K+ + + K ++ +V +++ + A GV +R + L + G Sbjct: 875 PIDIIKVDMTFTQGMVKSNVDRSIVMAVIGLSKSLGLKSLAEGVETREQVNILRELGCDL 934 Query: 622 GQGDFFA 628 QG F Sbjct: 935 AQGYLFG 941 >UniRef50_C8VVE0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVE0_DESAS Length = 738 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 97/433 (22%), Positives = 189/433 (43%), Gaps = 15/433 (3%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 +++R+I + + + I+ A D T + NR + + L + + K GT +++ Sbjct: 291 SIIRDIS----ERKKFELQIKHLATHDYLTNIPNRYYLEESLKRYVA-KAKRGTTSALLL 345 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE 320 + L +F +++DT GH +E T +L + LL R +FA LL ++ E Sbjct: 346 LDLDNFKLVNDTKGHVAGDELLIIFTKILKANLREED--LLTRLGGDEFAVLLEGISINE 403 Query: 321 AESIAGQLIKAVD--TLPNNKMLDRDDM-IHIGICAWRSGQDTEQVMEHAESATRNAGLQ 377 A IA +L +D T+ + + R ++ + IG+ D Q++ A+ A A Sbjct: 404 ATEIAEKLRAVIDNQTIALSLINVRFNLTVSIGLSMVDGSMDPIQILSQADRALYIAKES 463 Query: 378 GGNSWAIYD--DSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCR 434 G N + EK + +LI++ L + +P V + H E + R Sbjct: 464 GRNRVITIKGVEDTEEKLTMTNQLISLIKKALRDNLFEIVFQPIVKVAHRDIIHFEALLR 523 Query: 435 IFDGNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPR 493 + D + +S ++P+ +FG+ + D + +I LR ++ I ++ SL R Sbjct: 524 LKDDHGHLISPGHFIPVAERFGMMAQIDLWVLQSVIDTLRMHEGISIFINISGTSLSNER 583 Query: 494 FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLV 553 ++ + R+ E+ E + + + + IR + LG + A++ G+ Sbjct: 584 LLNQFESIVLNS-SVEPSRLGFEITETAAARDMIKAEQWIRKLKRLGCKFAIDDFGIGFS 642 Query: 554 STSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQT 613 S S+++ L V+ LK+ + NI++ T N LV+++ + A V + + Q Sbjct: 643 SFSYLRLLPVDYLKIDGSFIYNIDQETTNLALVKAMNTVAHTLDKKTIAEFVENENILQI 702 Query: 614 LIQRGVTGGQGDF 626 L + V QG F Sbjct: 703 LNELDVDYAQGYF 715 >UniRef50_A1S2J3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S2J3_SHEAM Length = 837 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 99/431 (22%), Positives = 182/431 (42%), Gaps = 20/431 (4%) Query: 215 RLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWG 274 RL + +R A +D TGL NR F+ ++ L QE V + + L F +++D+ G Sbjct: 403 RLKSELRRQAEEDAVTGLPNRTTFEARMKRLASGQETVA----LCYLDLEQFKIINDSCG 458 Query: 275 HSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIK--AV 332 H + + + + + PG LL R +F LL R+ E + L + ++ Sbjct: 459 HLEGDRMLCMVAKTFQSCLA--PGELLGRVGGDEFGILLLGRSAHEVALLLKTLQQKLSM 516 Query: 333 DTLPNNKMLDRDDMIHIGICAWRSG-QDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPE 391 L + R + IG+ R+ ++ + A+ A A +G N YDD E Sbjct: 517 QVLESQGQCHRVG-VSIGVAFARAPLPPVGELFKDADIACVAAKQKGSNQIHFYDDKDKE 575 Query: 392 KG--RGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHR--ELMCRIFDGNEEV-SSAE 446 R +W I + + LY +P + G + E++ RI + N + A+ Sbjct: 576 LNYQRNAPKWALRIAKAIHNRELELYFQPIHSLHGGSPRKRMEILLRIRESNGRILPPAQ 635 Query: 447 YMPMVLQFGLSEEYDRLQISRLIPLL----RYWPEENLAIQVTVESLIRPRFQRWLRDTL 502 ++ +F L E D+ +S + L +W + L+I ++ SL + ++ + L Sbjct: 636 FIASAERFKLMPEVDKAVVSMAMEWLAAHPNFWHDHCLSINLSGNSLGVEGMESFIVEQL 695 Query: 503 MQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELN 562 Q I E+ E Q+ R ++R + G A++ G S +++EL Sbjct: 696 -QRNGIPPACICFEITETTAIQNRQRALDMLRSLRKQGFAFAIDDFGSGFASYGYLRELP 754 Query: 563 VELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGG 622 V+ +K+ VR + ++ +V+S+ + CS + A V S+ L + G+ Sbjct: 755 VDYVKIDGCFVRQLASNAKDYAIVKSIHDVCSVMGIETVAEFVESQDIMARLEEIGINYA 814 Query: 623 QGDFFASSQPL 633 QG +PL Sbjct: 815 QGYAVGRPKPL 825 >UniRef50_A4CBU9 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CBU9_9GAMM Length = 686 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 114/564 (20%), Positives = 223/564 (39%), Gaps = 43/564 (7%) Query: 97 PVGSSDLFRELSVP----LIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLF 152 P GSS++ + + HPG+S ++Q + SL+ +IV L Sbjct: 124 PTGSSEVNDGWQIAGTLYVTSHPGVSYLQLWQYAQRAFLSSLV----------ILIVSLI 173 Query: 153 LAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRT---SSALDTLLREIQNA 209 +A L+ L + +A + R V W + A++ ++ +Q Sbjct: 174 IAHFILRAVLKPLHTVTEQADAV---SRKQFVHNPATYWTKEVNVLAGAINAMVVNVQKT 230 Query: 210 REQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLED-----QEKVGTHGIVMMIRLP 264 + ++ + A D T L NR F++Q L D Q +H I ++ L Sbjct: 231 FDSMTKHAENLTRDAYLDKLTALGNRRAFESQFKLDLHDLAEHHQANTSSHTI-GLVSLA 289 Query: 265 DFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESI 324 ++ +G+ + +L G + R F LPH + + Sbjct: 290 SLQSVNRDFGYQAGDAYVLEAVEILKNSFKNISGNKIYRIAGGSFIFTLPHNLELCLDQV 349 Query: 325 AGQLI-KAVDTLPNNKMLDRDDMIHIGICAWRSGQDTE-------QVMEHAESATRNAGL 376 QL+ +++ +L +++ + + + S QDT + ++A + Sbjct: 350 --QLVHESLQSLSSSRYPNGFGSV---VVTGYSEQDTLTELLARLDTLATTDAANLGQAV 404 Query: 377 QGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRL-YQKPAVTREGQVHHRELMCRI 435 + A + ++P G +W+ LI +L+ G YQ + + EL R Sbjct: 405 SATSFQAGSEQTIPSLGLQ--QWKQLINDILATGEVEFSYQPVKAANSTAIIYNELFARF 462 Query: 436 FDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQ 495 NE +++A M + L+EE D+ I L L + ++ +A+ ++ +SL F Sbjct: 463 SYQNELIANAPLFAMAERLDLTEELDKKIIMALGELSKNGLDKPVAVNISRQSLHSAHFS 522 Query: 496 RWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVST 555 WL M+ K + E+ E + +I+ I L G+++ + + G++ S Sbjct: 523 TWLSQ-FMRDAKPYMTELYFEVNETALLDNINGATNNINLFKTHGIKLCIERFGVSFSSF 581 Query: 556 SWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLI 615 +++ LNV+ +KL VR++ + +N +Q++ + C G +V A V + + L Sbjct: 582 KYLRGLNVDFIKLDGSYVRDLMQNPDNNYFIQAVTQICHGLGIKVIACHVEDEATYHKLN 641 Query: 616 QRGVTGGQGDFFASSQPLDTNVKK 639 + QG F + L N K Sbjct: 642 ELHCDASQGQFIQAPLKLAHNCLK 665 >UniRef50_Q7MDD9 Predicted signal transduction protein n=12 Tax=Proteobacteria RepID=Q7MDD9_VIBVY Length = 758 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 114/456 (25%), Positives = 210/456 (46%), Gaps = 49/456 (10%) Query: 202 LLREIQNAREQH-SRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 L+R I N +Q RL+ A D TGL NRL+ N + + L+++ + ++ Sbjct: 317 LVRSIANNEQQTIERLN----KQATHDTLTGLPNRLYLRNNVNSWLKNKTSPFS---LLF 369 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE 320 I + +F ++DT GH ++ +T L +F LL R +F L+ KE Sbjct: 370 IDMDNFKSVNDTHGHDFGDQVLKQITQRLGSF--NNDQRLLVREASDEFILLV-----KE 422 Query: 321 AESIAGQLIKAVDTLPNNKMLDR---DDM-----IHIGICAWRS-GQDTEQVMEHAESAT 371 ++ L+K++ T KM + +D+ +GI + + G D + ++ A+ + Sbjct: 423 SDP---ALLKSLATTMIAKMAEPYVINDVQFLLSCSVGIAVYPTHGNDLDALLRAADISM 479 Query: 372 RNAGLQGGNSWAIYDDSLPE----KGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVH 427 A Q NS+ I+ + E K + R R IEQ + +YQ P V G++H Sbjct: 480 YRAK-QERNSFNIFTTEMQEQHLYKTKVEQRLRFAIEQ---QKLFMVYQ-PQVDMAGKLH 534 Query: 428 HRELMCRIFDGNEE---VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW--PEE---N 479 E + R D EE V ++P+ GL + + I R + + + P+ N Sbjct: 535 GVEALVRWQD--EELGFVPPDLFIPVAESSGLMVKLGKFIIERSVSDIASYVLPQRQDLN 592 Query: 480 LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNAL 539 L+I ++V+ I+ F L T+ + RKRI +E+ E + + + +P+ +N Sbjct: 593 LSINISVKQFIQQDFAEHLLTTI-DTARLDRKRITLEITENLFIEDLEQFKPICNEMNQQ 651 Query: 540 GVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQ 599 G++++++ G S S +K+L ++ LK+ V NIE ++ +V++++ Sbjct: 652 GLKISLDDFGTGYSSLSMLKDLPIDELKIDKSFVDNIENDAKSFNMVKNIIAIGKNFGMA 711 Query: 600 VYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDT 635 V A GV + + L + G QG ++A +PL+ Sbjct: 712 VLAEGVETELQANKLAECGCDLLQGYYYA--KPLNV 745 >UniRef50_B8GQI8 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GQI8_THISH Length = 786 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 102/428 (23%), Positives = 183/428 (42%), Gaps = 31/428 (7%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGH-------S 276 A+ D T L NR +++L L G ++M+ L F ++DT GH Sbjct: 362 ASHDPLTDLPNRKLLNDRLQNELLRSGFTGAPLVLMVSDLDHFKEINDTLGHHVGDLVLQ 421 Query: 277 QVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLP 336 Q E+ + T +AR +F+ L P TL++ IA Q+ + ++ Sbjct: 422 QAAERLYKTVRKADT---------VARLGGDEFSMLFPDTTLEQGLKIARQIGRVFESPF 472 Query: 337 NNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRG 395 + + + I IGI + + G D +M+ A+ A A Q G ++A+YD P K Sbjct: 473 AVEGHNLNVGISIGIAEFPAHGDDVNILMQRADVAM-YAAKQNGLTYAVYD---PGKDTH 528 Query: 396 NVRWRTLIEQM---LSRGGPRL-YQKPAVTREGQVHHRELMCRIFDGNEE--VSSAEYMP 449 +V L+ + + G YQ G+V E + R +D + + E +P Sbjct: 529 HVSRLELLSDLRRAIETGSLECHYQCKLDIESGRVTGAEALLR-WDHPDRGMIHPDELIP 587 Query: 450 MVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQ 509 + + GL L + + + W E L + V V + + L DTL +C Sbjct: 588 LAEKTGLIRPLTNLVLRKALQECARWRESGLDLSVAVNLSAQCLREDSLLDTLRRCLDEF 647 Query: 510 R---KRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELL 566 R ++EL E+D+ R + ++ ++ +GVR++V+ G S +++K+L + + Sbjct: 648 RLPASACVLELTESDMMADPLRAKEILMELDVIGVRISVDDFGTGYSSLAYLKQLPISEI 707 Query: 567 KLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDF 626 K+ VR + + + ++V+++V+ +V A GV SR L + QG F Sbjct: 708 KVDRSFVREMLEDENDLVIVRAIVDLAHNLGIRVVAEGVHSREVLDMLARLKCNEAQGYF 767 Query: 627 FASSQPLD 634 P D Sbjct: 768 IRKPVPGD 775 >UniRef50_A0Q544 Signal transduction protein with a PAS, a PAC, an EAL and a GGDEF domain n=3 Tax=Francisella novicida RepID=A0Q544_FRATN Length = 772 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 102/441 (23%), Positives = 196/441 (44%), Gaps = 42/441 (9%) Query: 215 RLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWG 274 RLD I YA QD+ TGL NR +F++ ++ +E + +M + L F ++D +G Sbjct: 337 RLDE-IEKYAYQDMLTGLFNRYYFESHISDHIEKGARQRQPFTLMFLDLDRFKEVNDVYG 395 Query: 275 HSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDT 334 H ++ +++N L + L+AR +F T+ A A ++++ + Sbjct: 396 HQAGDKLLISVSNRLKELVRE--KDLVARLGGDEFLLFFVDMTIDNAIKKAHKVVEYI-- 451 Query: 335 LPNNKMLDRDDM-----IHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDS 388 K D DD IG+ + + G D E ++++A++A A G N + +Y+ Sbjct: 452 ---AKPYDIDDKQFIISASIGVVNYPQDGTDFEHLLKYADAAMYRAKDLGRNRFFLYNQE 508 Query: 389 LPEKGRGNVRWRTLIEQMLSRGGPR------LYQKPAVTREGQVHHRELMCRIFDGN-EE 441 + +K V + I+Q+L+ L+Q ++ Q++ E++ RI + Sbjct: 509 ISDK----VCYDLKIKQVLNDAFENTDYIQVLFQPQYDLKQRQIYGIEILSRINHPDLGV 564 Query: 442 VSSAEYMPMVLQFGLSEEYDRL-------QISRLIPLLRYWPEENLAI--QVTVESLIRP 492 V +++P++ +D++ QIS +L E+N I VTV ++ Sbjct: 565 VCPKDFIPILQSINQMPSFDKIVLQKACQQISSNDMML----EQNFRISQNVTVPVIMSE 620 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 ++ R D + Q + S + R E+ E L+ G+ V ++ G Sbjct: 621 QYCREFIDIIKQYKISPQ-RFSFEVIENIAIDDYKTACKNFCLLKKEGISVEIDDFGSGY 679 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S S++ + + +LK+ V+NI E + + ++++ + +V A GV ++ + Sbjct: 680 SSLSYLAQFPITVLKIDSFFVQNIHHPREEK-ICRAIISLAESLNLKVIAEGVETKHQAD 738 Query: 613 TLIQRGVTGGQGDFFASSQPL 633 TL + G QG F SQPL Sbjct: 739 TLYKMGCYLHQG--FLYSQPL 757 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 106/447 (23%), Positives = 189/447 (42%), Gaps = 29/447 (6%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 ++ +I ++ +RL+ L+ D T L NR ++L LE ++ G V+ + Sbjct: 620 VMTDISQLKQSEARLEHLVH----YDPLTNLPNRRLVQSRLEHALERADRQGGRVAVLFV 675 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL-----PHR 316 L F ++D+ GH + L LS + LAR +F LL P Sbjct: 676 DLDRFKTVNDSLGHPSGDVLLELLARRLSERVRE--DDTLARLGGDEFLVLLENLQRPED 733 Query: 317 TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGL 376 AES+ L++ LPN + L I I + G +++HA+ A A Sbjct: 734 AAAVAESLLS-LLQQPFHLPNGQELYVGASIGISLYP-DDGHTVTDLIQHADVAMYQAKE 791 Query: 377 QGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRL-YQKPAVTREGQVHHRELMCRI 435 +G N++ Y SL + R + + + L+ L YQ R+G++ E + R Sbjct: 792 EGRNTYRFYTPSLTQTARERLGLEARLHRALASEEFVLHYQAQIDMRDGRLIGCEALVRW 851 Query: 436 FDGNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESL 489 E V+ ++P+ + GL + + + W L A+ ++ L Sbjct: 852 HSATEGLVAPDRFIPLAEETGLIVPLGEWVLRQACADCQSWRARGLTDLTVAVNLSGRQL 911 Query: 490 IRP----RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAV 545 P R R LR+T + E R+ +EL E+ + + +R + ALGVR+++ Sbjct: 912 RSPDLVERVTRVLRETGLPAE-----RLKLELTESMIMDQREQALERLRALKALGVRLSI 966 Query: 546 NQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGV 605 + G S +++K L ++ LK+ VR+I + + + + +++ V A GV Sbjct: 967 DDFGTGYSSLAYLKRLPIDELKIDRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEGV 1026 Query: 606 RSRSEWQTLIQRGVTGGQGDFFASSQP 632 + + LI++G T GQG F P Sbjct: 1027 ETPEQCDFLIRQGCTAGQGYLFGRPLP 1053 >UniRef50_A6CVM5 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CVM5_9VIBR Length = 709 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 106/448 (23%), Positives = 195/448 (43%), Gaps = 45/448 (10%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 I A D T L NR F L + ++ T V+ + L +F +++D +GH + Sbjct: 265 ITHLAYHDALTELPNRTRFIQHLQSTIKSYP--ATSFSVLFLDLDEFKVVNDNYGHDSGD 322 Query: 280 EQFFTLTNLLS----TFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTL 335 L LS +P +++R +F L+PH LK E + + K + Sbjct: 323 FLLIRLAEKLSLCARDITNDHPLTMISRIGGDEFLMLIPH--LKTTEDVDAVIKKIFVAV 380 Query: 336 PNNKMLDRDDMI---HIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPE 391 + +++ ++++ IG+ + +G+ +E ++++A+ A A G N+ ++ Sbjct: 381 RSPILMENEELVVGGSIGVARYPYNGKTSEDLIKNADIAMYRAKADGKNTHKVF----TP 436 Query: 392 KGRGNVRWRTLIEQMLSRGGPRLYQ-----KPAVT-REGQVHHRELMCR-------IFDG 438 K +V R IE+ L R L Q +P V + G++ E + R I Sbjct: 437 KMFKSVVHRANIERELRRSLSDLQQFELWFQPLVCIKTGRILGAESLVRWRHPTLGIVPP 496 Query: 439 NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW-----PEENLAIQVTVESLIRPR 493 + +S AE M+L G + I RL L+ W P+ + +I ++ + L R Sbjct: 497 VDFISIAEETAMILPLG------QWLIERLCIQLQQWAPYFAPDFHASINISSKQLYR-- 548 Query: 494 FQRWLRDTLMQCEKSQ--RKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 Q + EK Q K I IE+ E+ + Q + ++ + G+ V ++ G Sbjct: 549 -QNLVEMFAFYMEKYQVPAKAIRIEITESLLLQDEDEAERTLKAIRESGIEVWLDDFGTG 607 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S S++++ V+ +K+ VR+I ++Q LVQ++V V A G+ + Sbjct: 608 YSSLSYLRKFTVDGIKIDRSFVRDIITDPKDQQLVQAMVAMAKNLDLLVVAEGIEKIEQA 667 Query: 612 QTLIQRGVTGGQGDFFASSQPLDTNVKK 639 + L Q G GQG ++ P+D VK+ Sbjct: 668 EKLSQYGCQIGQGYYYDKPMPVDDFVKR 695 >UniRef50_A4SLY8 GGDEF/EAL domain protein n=2 Tax=Aeromonas RepID=A4SLY8_AERS4 Length = 547 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 125/514 (24%), Positives = 216/514 (42%), Gaps = 39/514 (7%) Query: 141 TGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALD 200 T +GF + M LA R + A Q+ + +A ++ R VL T +AL Sbjct: 43 TSLLGFGL-MFMLAYRARNAERAQQDRVWIKALQL----RDPAVLET-----AEAQAALQ 92 Query: 201 TLLREIQNAR-EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVM 259 LL A + H ++D L + A QD T L NR F + LL+ + T +V+ Sbjct: 93 QLLSHFNEADLDAHRQIDEL-HNLATQDELTQLQNRHAFRRDMTALLQRDQDTQTATLVL 151 Query: 260 MIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK 319 IR + L+ G + + NL++ + R+PG + R +DFA L+ Sbjct: 152 -IRATELGKLNAQRGFQSGDAYIKDIANLITRVVSRFPGHQVYRISGADFAVLVQPVANI 210 Query: 320 EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGG 379 + L A D L+ + G+ SGQ E ++ A+ A A + Sbjct: 211 PPPLLGRDLKIAFDHYQQQHELE--SAAYSGLTRLSSGQKIEAILARADLALARAQTETV 268 Query: 380 NSWAIY-DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG 438 N WAI DD +G W+ ++ ++L + +P Q HR ++ Sbjct: 269 NGWAIQQDDDEVVDLQGQHHWKLVLNELLDQERISFTYQPI-----QSMHRSMLAY---- 319 Query: 439 NE---EVSSAE--YMPMVLQFGLSEEYD---RLQISRLIPLLRYW-----PEENLAIQVT 485 NE SSA+ +P F +++ D +L+ ++ ++R + + I ++ Sbjct: 320 NEIYTRFSSADGTVLPTDTLFAMAQRLDMVMKLEQMLVVHIMRQYRAFGANQSRWGINLS 379 Query: 486 VESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAV 545 L F WL L++ + + ++ EL E + ++++ + V L+ G R A+ Sbjct: 380 SNLLQNSTFLIWLDRQLLK-DPNTSANLVFELDEEHLERNMTGAKRVFELLRRNGSRSAI 438 Query: 546 NQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGV 605 G + S + +EL + +KL P L+ +E+ NQ V+ +V+ QV A GV Sbjct: 439 CNFGKGIGSFNLFRELKPDYIKLDPALITGLEQDLTNQQFVRMIVDVSHRMGCQVIAEGV 498 Query: 606 RSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKK 639 + Q L V G QG A QPL ++ + Sbjct: 499 EQLGQKQLLQGMYVDGLQGYLIARPQPLRPDISQ 532 >UniRef50_Q67RI1 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67RI1_SYMTH Length = 1016 Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 100/424 (23%), Positives = 175/424 (41%), Gaps = 16/424 (3%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 +R A D T L NR +F +L L+D G + + DF ++DT GH + Sbjct: 591 LRRLAHFDPLTDLGNRRYFQRKLEAALDDPAT--PRGALFFLDFDDFKFVNDTLGHLAGD 648 Query: 280 EQFFTLTNLLS-TFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDT-LPN 337 + L +++ T R +AR +F L+P AE++A L+ AV + + Sbjct: 649 DLLKNLARVMTETLGGR---GFMARLGGDEFGILVPGVDASGAEALAQDLLAAVRSQIAA 705 Query: 338 NKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKG-RG 395 N I +GI + G E +M HA+ A A GG+ + +Y P G Sbjct: 706 NPACPTYVTISVGIALYPDHGHTAETLMLHADLAMYQAKHSGGDRYCMYVAFEPLNGDEA 765 Query: 396 NVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFDGN-EEVSSAEYMPMVLQ 453 W + L+ L +P + + G+V E + R+ + + ++ E++P Sbjct: 766 GSAWEIRLRAALAEDRFTLVFQPILDLQLGEVTQYEALLRMVEPDGRQIPPGEFLPAAAS 825 Query: 454 FGLSEEYDRLQISRLIPLLRYWPEEN----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQ 509 GL E DR + R + + L++ ++ ++L P +RD L+ + Sbjct: 826 CGLMPEIDRWVVRRAVETIAREQARGRRLTLSVNLSGQALNDPSLVPLVRD-LIDRHQIP 884 Query: 510 RKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLH 569 + E+ E+ + + I + LG A++ G+ S ++K L V LK+ Sbjct: 885 PGSLRFEVTESAAVTDLDQAAACIEALTDLGCEFALDDFGVGFSSLRYLKRLPVRTLKID 944 Query: 570 PGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFAS 629 G + + +Q LV+S+V G + A V S + L + GV QG + Sbjct: 945 GGFIERLPDDPVDQSLVRSMVTMARGLGVRTVAEYVTSDRALEMLRRCGVDAAQGYYVGP 1004 Query: 630 SQPL 633 PL Sbjct: 1005 PGPL 1008 >UniRef50_B1KCF3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1KCF3_BURCC Length = 935 Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 104/435 (23%), Positives = 181/435 (41%), Gaps = 35/435 (8%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 IR A D TGL NR +Q ++L VM + L F ++DT GH+ + Sbjct: 502 IRRLAFYDGLTGLPNRQLLMSQAESVLAAAVASQHSFAVMFVDLNSFKQVNDTLGHAAGD 561 Query: 280 EQFFTLTNLLSTFMMRYPGAL-----LARYHRSDFAALLP----HRTLKEAESIAGQLIK 330 LLS R L + R +F +L TL AE +L + Sbjct: 562 -------GLLSEVAQRLKIDLRDTDIVGRLSGDEFVIVLSPADIELTLDFAERTMNRLRQ 614 Query: 331 AVDTLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSL 389 V N +GI + + G+ +M+HA+ A A G + + +++ L Sbjct: 615 PVQISDTNLR----PAASMGIAIFPQHGESIGALMQHADMAMYEAKFAGHHEYRVFEPEL 670 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCRIFD---GNEEVSSA 445 + + L G +L+ +P V + ++ E + R F GN V+ Sbjct: 671 MRAREARRKLGLALRDSLVAGELQLHYQPQVRLDDDSLYGVEALARWFHRDFGN--VAPD 728 Query: 446 EYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRD 500 ++P+V + GL E++R ++ L W E L ++ ++ + P F L Sbjct: 729 HFIPLVEECGLVAEFNRWVLTEACRQLAQWCEAGLDVPRISVNISPTAFRDPAFAS-LVS 787 Query: 501 TLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKE 560 +L+ K ++ +E+ EA + + I+ V++LGV +A++ G S S+++ Sbjct: 788 SLLGTYKLAPSQLTLEVTEAVLLDATDSVMTTIQDVHSLGVNMAIDDFGTGYSSLSYLRR 847 Query: 561 LNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVT 620 L V +KL + N+E + LV S+ + C+ + A GV + + Q L RG Sbjct: 848 LPVNEVKLDKSFISNVENSENARSLVNSVADICAKLHLTIVAEGVETDVQRQILQARGYQ 907 Query: 621 GGQGDFFASSQPLDT 635 QG F S P++ Sbjct: 908 VAQGYLF--SPPIEA 920 >UniRef50_D0IWU4 Diguanylate cyclase/phosphodiesterase with n=3 Tax=Comamonadaceae RepID=D0IWU4_COMTE Length = 869 Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 115/474 (24%), Positives = 206/474 (43%), Gaps = 34/474 (7%) Query: 183 NVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQL 242 VLG+ + + S A+ +LR++ +REQ +D I A D TGL NR F+ +L Sbjct: 343 KVLGSAMQRDGQASGAV-FVLRDV--SREQQY-MDQ-ISWNARHDTLTGLENRGEFERRL 397 Query: 243 ATLLEDQEKVGTHGI----VMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPG 298 +L G H + ++ I L F ++++T GH+ +E ++ +L + Sbjct: 398 QKMLTQ----GLHQVKPYALLYIDLDQFKLINETSGHAAGDEVLCEVSRMLQANLRETD- 452 Query: 299 ALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLP---NNKMLDRDDMIHIGICAWR 355 LAR +FA LL + SIA +L A L K+L R + Sbjct: 453 -CLARMGGDEFAVLLENCPPSNVASIAEKLRLAAQQLQTTWGEKIL-RTGFSIGAVHVPG 510 Query: 356 SGQDTEQVMEHAESATRNAGLQGGNSWAIY--DDSLPEKGRGNVRWRTLIEQMLSRGGPR 413 + ++ + A A +G N Y +D + + + W T I L Sbjct: 511 DAVNASDLLRMVDMACYQAKERGRNKVFFYKAEDGIYSRYVSEMEWATRIRTALDEDRFC 570 Query: 414 LYQKPAVTREGQVH------HRELMCRIFDGNEEV-SSAEYMPMVLQFGLSEEYDRLQIS 466 LY + + + H H E++ R+ D N ++ + ++P ++GL DR I+ Sbjct: 571 LYAQSIAPLQARKHSRHGGMHFEVLLRLRDENGQILAPGHFIPAAERYGLMPSLDRWVIT 630 Query: 467 RLIPLLRYWPE-----ENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEAD 521 R + L P E AI ++ SL ++++ L Q + +K + E+ E Sbjct: 631 RALQTLAQQPGHAKLVETCAINLSGPSLDDDGLLEFVKEQLQQHAIAPQK-LCFEITETS 689 Query: 522 VGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTE 581 ++S +I+ + ALG R A++ G+ + S +++K+L V+ LK+ G VR++ K Sbjct: 690 AIGNLSNATRLIQSLRALGCRFALDDFGVGMSSLTYLKQLPVDYLKIDGGFVRDMLKDKG 749 Query: 582 NQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDT 635 + +V+ + + A V SR + L+ GV QG A +P+ + Sbjct: 750 DHAMVEMINRIGQTLGKKTIAEFVESREIAEELMTMGVDYVQGYAIARPKPMTS 803 >UniRef50_B6BNW2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNW2_9PROT Length = 779 Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 80/422 (18%), Positives = 191/422 (45%), Gaps = 27/422 (6%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 ++++A D T L NR L+++ G + ++++ + F+ ++D +GH + Sbjct: 375 LKTFANTDSLTKLGNR--------NALKEEIDYGENIFLILVNIDSFSQINDFYGHELGD 426 Query: 280 EQFFTLTNLLSTFMMRYPGALLARYHRSDFAAL---LP-HRTLKEAESIAGQLIKAVDTL 335 ++ L Y L R +FA L +P H +++A+SIA + V + Sbjct: 427 AILVEFSSKLLQSCSLYEELRLFRVSGDEFAILTIDMPAHTVVQKAQSIAKFINAHVYEV 486 Query: 336 PNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDS--LPEKG 393 +D+ + + S ++ +Q++ A+ A + A + +YD + L ++ Sbjct: 487 -------KDETVELNATISISLEEKDQLLITADMALKIAR-RDAKDLLVYDKAMNLDKEY 538 Query: 394 RGNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFDGNEEVSSAEY-MPMV 451 N+ W I++ + L+ +P V G+++ E + R+ D +++V + + + + Sbjct: 539 ENNMLWTKKIKEAIKNDKIVLFFQPIVDNATGEINKYESLIRLIDSDDKVITPYFFLEIA 598 Query: 452 LQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRK 511 + L ++ ++ I + R E ++ ++++ ++ ++ + L S R Sbjct: 599 KKAKLYKQLTKIVIQKSFENFRENDFE-FSVNISIDDILDKEINAYILEMLNIYNISHR- 656 Query: 512 RIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPG 571 +I E+ E++ ++ +Q I+ V LG RVA++ G + ++ L + +K+ Sbjct: 657 -VIFEIVESESIENFDEIQRFIKSVKELGCRVAIDDFGTGYSNFEYLMRLEADFIKIDGS 715 Query: 572 LVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQ 631 +++ I ++++ +V+ QV A V S +Q + + G+ QG +F+ + Sbjct: 716 IIKEILDNKNSEIITTVIVDFAKKMGIQVIAEFVESEEIFQKVKELGIEKSQGYYFSEPK 775 Query: 632 PL 633 P Sbjct: 776 PF 777 >UniRef50_A2SGZ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SGZ7_METPP Length = 638 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 113/446 (25%), Positives = 195/446 (43%), Gaps = 22/446 (4%) Query: 196 SSALDTLLREIQNA-REQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGT 254 S A++ +++ +Q EQ ++L+ L R A D TGL+NR F QL+++L +E Sbjct: 206 SRAMNAMVQRLQAVFGEQGAQLEAL-RQQAQTDPLTGLSNRSHFLAQLSSMLV-REDTPR 263 Query: 255 HGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLP 314 G++++ R+ D L+ GH+ + TL L + G R + A Sbjct: 264 AGVLLLARVHDLAGLNRNAGHAATDALLQTLALSLRSATA---GGAAPMTGRLNGADFAV 320 Query: 315 HRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNA 374 +A +A L AV T R + IG +WR+G +M+ A++A A Sbjct: 321 QAADADAAHVAAVLQTAVKTALKPWTGVR---VAIGAVSWRAGDSVATLMQAADAALVRA 377 Query: 375 GLQGGNSWAI--YDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRE-- 430 Q G A+ ++ E G WR L+ Q L RG +L P + R+ ++ H E Sbjct: 378 ETQDGFGLAVDGLSETNAETALGESGWRLLLRQALERGDAQLGSFPVIGRDARLLHLESP 437 Query: 431 LMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIP--LLRYWPEENLAIQVTVES 488 L R+ +G +A ++P VL+ S D L + + L P + + +S Sbjct: 438 LRLRLHEGGAFEPAARWLPWVLRSQFSASTDLLAVRLALEQIALDGVPR---GVNLAADS 494 Query: 489 LIRPRFQRWLRDTLMQCEKSQRKRII-IELAEADVGQHISRLQPVIRLVNALGVRVAVNQ 547 L F LR + +Q R++ +E+ E + + L+ + + + LGV++ + Sbjct: 495 LADSGFLASLRG--LVSAHAQAARVLWLEVGERAAVEQLPVLRDLGQQLRPLGVQLGLEH 552 Query: 548 AGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRS 607 AG L + E ++ +KL L + + + V+ L G +V A GV Sbjct: 553 AGERLARIDRLYEAGLDYVKLDGALASGLAQDSTRADFVRGLAWTLHGLEIRVLAEGVAD 612 Query: 608 RSEWQTLIQRGVTGGQGDFFASSQPL 633 ++ Q L G+ G G + S+QPL Sbjct: 613 AADAQALWACGLDGITGPWV-STQPL 637 >UniRef50_C6P353 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P353_9PROT Length = 727 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 96/417 (23%), Positives = 183/417 (43%), Gaps = 21/417 (5%) Query: 223 YAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQF 282 Y+ D TGL+NR F+ L ++ E+ ++M+ L DF ++DT+GH + Sbjct: 306 YSTHDPLTGLHNRRHFNEMLEYEIDRSERHNHEFSILMLDLDDFKDINDTYGHPCGDATL 365 Query: 283 FTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDT----LPNN 338 ++ ++ + M + G L R +FA +L + + A +A +L A+ PN Sbjct: 366 CAVSEIVRSTMRK--GDLTTRIGGDEFAIILTETSQEGAREVAEKLRVALRDHKFEAPNG 423 Query: 339 KMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNV 397 K IG+ A+ + Q+ +M + A G +S ++ + +K + Sbjct: 424 KTFHT--TTSIGLIAYPKDAQNISDLMAGVDIGLYRAKSIGKDSVCSVEE-VEDKIQTGR 480 Query: 398 RWRTLIEQM---LSRGGPRLYQKPAV-TREGQVHHRELMCRIFDGN-EEVSSAEYMPMVL 452 R E+M L + Y +P + + G++ E + R+ + N E +S+ ++ ++ Sbjct: 481 NVRDHAEKMREALRNDHIKPYFQPVIDCKSGEIFAYEALARLVEPNGETISAGAFIEIIE 540 Query: 453 QFGLSEEYDRLQISRLIPLLRYW-----PEENLAIQVTVESLIRPRFQRWLRDTLMQCEK 507 ++G+ E DR+ I + + L+ L I ++ + I+ R + L Q + Sbjct: 541 KYGMGRELDRVMIQKSLETLKAHIAAQGAPRKLFINLSSQE-IQGRGVLGFAEKLCQELE 599 Query: 508 SQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLK 567 + I+ EL E D ++R++ + + G A++ G S +++EL+ E +K Sbjct: 600 IPPQNIVFELLERDAIGDMTRMRKFLAELRKSGFSFALDDFGSGYNSFHYLRELHFEFVK 659 Query: 568 LHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 L VRNI ++ LV +L C + A V S+ L GV QG Sbjct: 660 LDGDFVRNILVSKIDRALVSNLSRLCRDLGMLMVAEFVESQEIMDELNAMGVDYAQG 716 >UniRef50_D1CDW9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDW9_THET1 Length = 718 Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 91/439 (20%), Positives = 193/439 (43%), Gaps = 20/439 (4%) Query: 206 IQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPD 265 +Q+ EQ ++L+R A D TGL NR+ QL LL V+ + L + Sbjct: 276 VQDVTEQKVNEESLLRQ-ALHDPLTGLPNRVMLGQQLEKLLASNRSRSIA--VLFLDLDN 332 Query: 266 FNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESI 324 F ++D GH + + LS + P AR+ +F ++ +++ SI Sbjct: 333 FKAVNDNLGHQAGDSLLVAVARRLSANL--RPTDFAARFGGDEFTVVVTKVKSIDYVVSI 390 Query: 325 AGQLIKAVDTLPNNKMLDR---DDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNS 381 A ++I+++ + P + +R I I +C+ ++ A+ A + G + Sbjct: 391 AKRIIESI-SQPFDIAGERVYTSTSIGIALCSSSEDS-ASSLLRKADIALYKSKSLGRGT 448 Query: 382 WAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCRIFDGNE 440 + I+D S+ ++ + + + ++ +P V G+V E + R N Sbjct: 449 YVIFDQSMEQEASEILELERNLRTAIQNDQFIVHYQPIVDAATGKVEMIEALLRWNSPNG 508 Query: 441 EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLA-----IQVTVESLIRPRFQ 495 +S +++P+ + GL L +++ Y A I V+ + L +P F Sbjct: 509 ILSPDKFIPIAEEVGLINTLGELVLNKACEQTAYLKATTGAKFITSINVSAKQLRQPHFT 568 Query: 496 RWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVST 555 L L + + Q K + +E+ E + + + + ++ + LG+R+A++ G S Sbjct: 569 NNLESMLHKYDL-QPKDVQLEITENALVEEVECITNALKEIKTLGIRIAIDDFGTGYSSL 627 Query: 556 SWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLI 615 S++++L ++L+K+ V+ + E++ ++ +++ ++ A GV +S+ + L+ Sbjct: 628 SYLRKLPIDLIKIDQSFVKMLPNDEEHRAIIYTIISLACSLDLEIIAEGVEEKSQREILL 687 Query: 616 QRGVTGGQGDFFASSQPLD 634 G QG+ S P+D Sbjct: 688 SMGCKFIQGNLI--SHPVD 704 >UniRef50_B4RSR4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4RSR4_ALTMD Length = 644 Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 101/450 (22%), Positives = 194/450 (43%), Gaps = 38/450 (8%) Query: 196 SSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTH 255 +S ++TL + + ++ +R L + A++D T L NR F+ + LL ++ Sbjct: 208 TSTVNTLSSTLASKFDELTRQSELFKKEASKDSLTKLANRGAFERHMRALL-NENATSQE 266 Query: 256 GIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLST---------FMMRYPGALLARYHR 306 ++++RL ++ G + + N+L F+ R G Sbjct: 267 KELIIVRLAQLASINTKLGMVPGDNYVKAIANILVEETKNNSNVRFVFRLTGG------- 319 Query: 307 SDFAALL-----PHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTE 361 DFA + P R L +I+ Q A + + D +IGI + Sbjct: 320 -DFALICEAMEKPVRDLM-LTNISKQCASA------SPLRDGTKATYIGITRFTGTMSMP 371 Query: 362 QVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT 421 QVME +SA A ++ + W + + N RWR + ++++ + +P + Sbjct: 372 QVMESVDSALI-AAMKTQSGWELASE--ISHVHSNTRWRERLNYIVAQQYADIMIQPVMN 428 Query: 422 REGQV-HHRELMCRIFDG--NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE 478 E + + E R D NE + ++ +P + L + DRL S + + ++ Sbjct: 429 IEQNIPAYYETFGRFKDKDTNEVIPMSQLIPASERLDLIPQVDRLVTSIVFKKMEVTSQQ 488 Query: 479 NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNA 538 +A+ +++ S+ F+ WL + L Q ++ R++ E+ +A + Q+ + + R + Sbjct: 489 -VAVNLSITSIANGEFRAWLVNELTQ-RQALCPRLLFEVEDAALIQYRDYAESLCRQLIN 546 Query: 539 LGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTST 598 LG RV + G S S ++ + + +K+ L + I ENQL V SL+ +G + Sbjct: 547 LGCRVTIEHFGDHFASLSGLRAIKPQFVKISGRLTQGIHTNKENQLFVSSLINIATGLNI 606 Query: 599 QVYATGVRSRSEWQTLIQRGVTGGQGDFFA 628 +V A V + +E L + GV QG +FA Sbjct: 607 KVIAEMVETEAESVALNKLGVEHQQGYYFA 636 >UniRef50_A0Z5D2 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z5D2_9GAMM Length = 640 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 116/516 (22%), Positives = 208/516 (40%), Gaps = 51/516 (9%) Query: 129 NYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTI 188 N F +L+ + L G IG ++ LQR LA + + +A I GER I Sbjct: 152 NMFWALLASVALAGLIGSLL---------LQRILAPLKGVVIQAKAI--GERR-----FI 195 Query: 189 YEWPPRTSS------ALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQL 242 P T+ A++ L R + ++ S+ + R D TGL R F +L Sbjct: 196 TTPEPSTTEFAEVTRAMNELARRVGEMLQKESQRLSRQREATEIDAGTGLLLRSPFMARL 255 Query: 243 ATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLA 302 LE E G V ++RL + L+ +G ++ + + ++ + + Sbjct: 256 GAKLES-EDADASGSVALVRLSNLARLNQNFGRQTMDAVLAEIGSSITRLNLSQSDWVAG 314 Query: 303 RYHRSDFAALLPHRTLKEAESIAGQLIKAV-DTLPNNKMLDRDDMIHIGICAWRSGQDTE 361 R + SDF L P E + A L + + + L N +M + + + SGQ Sbjct: 315 RLNGSDFCLLAP--LANEPKQAAEALQRIIWEVLANFEMTETP--LPSACVTYTSGQTIG 370 Query: 362 QVM-----------EHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRG 410 VM E ES A L G++ I + + W + + + Sbjct: 371 HVMAALDGALVVSDEQEESEVIVANLTSGSAIPIREQA--------SLWHSQLLTAIEEQ 422 Query: 411 GPRLYQKPAVTREGQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIP 470 + P VT +GQ+ H E M RI + S+ E+MP V + LS E D++ I Sbjct: 423 QLVIATFPVVTPDGQLIHHEGMLRINVDGQLRSAGEFMPWVHRLNLSYEIDQIATGLAIE 482 Query: 471 LLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQ 530 +R + A +T +L+ RF WL + ++ ++ +E+ EA + Sbjct: 483 KIRETGQSTCA-NLTSAALLDGRFNTWL-ELFLKNHTENANKLNLEIGEATAFAQPDNFK 540 Query: 531 PVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLV 590 ++ + +A GV++ + G + + +L ++ +K+ R+I + N L+++ + Sbjct: 541 RLVSVAHAAGVKIGIEHMGYRISDIGQLGDLGMDYIKMDSLFSRDINNSSGNAALMRTYI 600 Query: 591 EACSGTSTQVYATGVRSRSEWQTLIQRGVTG--GQG 624 A G+ S + + GV+G GQG Sbjct: 601 NIAQSLGLPCIAEGISSADALSAVFELGVSGACGQG 636 >UniRef50_C6MI98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MI98_9PROT Length = 798 Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 109/441 (24%), Positives = 196/441 (44%), Gaps = 33/441 (7%) Query: 218 TLIRSY-AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHS 276 TL +Y AA D TGL NR F+N+L+ +L K H + + + L F +++D+ GHS Sbjct: 361 TLKLAYQAAHDSLTGLLNRKEFENRLSKILTSMRKNDMHAL-LYLDLDQFKIINDSCGHS 419 Query: 277 QVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLP 336 ++ +T LL + + LAR +F +L H +A +A L + V Sbjct: 420 AGDKLLRQVTALLHSKLRARDT--LARLGGDEFGVILEHCPKDQALQVADTLRELVQ--- 474 Query: 337 NNKMLDRDDMIHIGICAW-----RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPE 391 N + R IG+ Q E + A+SA A QG N IY S+P Sbjct: 475 NFRFQWRGKTFTIGVSIGLFPITHGNQGLEHALNAADSACYAAKEQGRNRVQIYQ-SVPH 533 Query: 392 KGRGNV---RWRTLIEQMLSRGGPRLYQKP----AVTREGQVHHRELMCRIFDGNEE-VS 443 +G+V +W I+ L+ +LY +P + Q H E++ R+ D N + + Sbjct: 534 L-QGSVEMQQWLPRIQNALTEQRFQLYYQPIQLISPKHAEQEQHGEILLRLQDENGQLIM 592 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL----AIQVTVESLIRPRFQRWLR 499 ++P + DR + + + L++ + I ++ ++L+ F + Sbjct: 593 PGAFLPAAGRHDQILPIDRWVVQQSLQLIKAHATHTINAIYTINISGQALVNEDFLDFTV 652 Query: 500 DTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNAL---GVRVAVNQAGLTLVSTS 556 +++ + + I E++E ++ LQ VIR V L G R++++ L S S Sbjct: 653 NSI-KASQLDPACICFEISEQTA---LNDLQHVIRFVTTLKELGCRISIDDFSSNLSSFS 708 Query: 557 WIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQ 616 ++K++ ++ LK+ L++N+ NQ +V+S+ + A V + Q L Sbjct: 709 YLKDIPLDYLKIDGRLIKNMLTDPVNQAMVESIHHIGHIMRLKTIAVWVENDQTLQILEN 768 Query: 617 RGVTGGQGDFFASSQPLDTNV 637 GV QG + A PL+ ++ Sbjct: 769 IGVDYVQGFWVAEPTPLNASL 789 >UniRef50_Q2P5I3 Putative uncharacterized protein XOO1439 n=9 Tax=Xanthomonas RepID=Q2P5I3_XANOM Length = 798 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 108/446 (24%), Positives = 193/446 (43%), Gaps = 19/446 (4%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 +L I++ H D + +A D TGL NR + +L L+E + + Sbjct: 346 VLAVIEDVSHAHDLADQ-VAFHACHDALTGLINRHEIERRLQLLIELPRSPQMCHALCFV 404 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA 321 + F +++DT+GH+ V ++F + T +R PG L R +FA LL + L +A Sbjct: 405 DMDYFKLVNDTFGHA-VGDKFLCHFADVITMQLR-PGDWLGRLGGDEFAILLANTDLPQA 462 Query: 322 ESIAGQLIKAVDTLPNNKMLDRD--DMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQG 378 ++ + + AV P + R G+ R S D +M A+ A A +G Sbjct: 463 RALL-EGMHAVLGQPWSHQGGRPLTPSCSFGVVEIRQSASDVNSLMTAADLACHAAKEEG 521 Query: 379 GNSWAIYD--DSLPEKGRGNVRWRTLIEQMLSRGGPRLY-QKPAVTREGQVHHRELMCRI 435 N ++ D + R + W + ++ ++ LY QK V + E++ R+ Sbjct: 522 RNRIRCFNETDVALAQRRHDGGWISAVQLAIAEERLLLYAQKIQVLSDPGRLQYEVLVRM 581 Query: 436 FDGNEEV-SSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAI------QVTVES 488 + V S E++P V ++GL D + L L P +LAI ++ +S Sbjct: 582 RASDGRVLSPGEFLPAVERYGLGRMVDTYVLESLCAQLSANPM-HLAILDLCHVNLSAQS 640 Query: 489 LIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQA 548 + +P F ++ L + + ++ +E+ E V + Q ++ V A G VA++ Sbjct: 641 IAQPDFLDFVC-ALFERYPALVPKLCMEITETAVIGDLEHAQRFVQSVRARGCHVALDDF 699 Query: 549 GLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSR 608 G + S ++K+ V++LK+ G VRN ++ V S+ + +V A GV S Sbjct: 700 GSGMASFGYLKQFTVDVLKIDCGFVRNYAHDAVDRAAVHSIAQVGLALGIEVVAEGVESE 759 Query: 609 SEWQTLIQRGVTGGQGDFFASSQPLD 634 ++ L GV QG PL+ Sbjct: 760 ADIPGLRDAGVGQVQGFSLHRPCPLE 785 >UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5Q6_AZOSB Length = 828 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 106/448 (23%), Positives = 188/448 (41%), Gaps = 37/448 (8%) Query: 203 LREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIR 262 + +I++A+ Q RL A D TGL NR ++LA + + GT V+ + Sbjct: 368 ISQIKDAQSQLERL-------AHYDPLTGLPNRALLGDRLAHAISRARRAGTSVAVLFLD 420 Query: 263 LPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGAL-----LARYHRSDFAALLPHRT 317 L F ++D+ GH + LL R GAL ++R+ +FA +L Sbjct: 421 LDGFKNVNDSLGHPAGD-------RLLQIIAERLCGALRSEGSVSRFGGDEFAVVLEDVV 473 Query: 318 LKEAES-IAGQLIKAVDTLPNNKMLDRDD-----MIHIGICAW-RSGQDTEQVMEHAESA 370 EA S +A LI + + LD D IGI + R G D +++ A++A Sbjct: 474 RGEAVSEVAEHLIAEI-----ARPLDLDGHGAHVSASIGIALFPRDGDDATTLIKAADTA 528 Query: 371 TRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHR 429 + G N+++ + + + + + + Q L +G L+ +P + R G + Sbjct: 529 MYRSKALGRNTFSFHHEDMAQAAHRRLSLEHGLRQALEQGRFELWYQPQIDLRTGVLAGA 588 Query: 430 ELMCRIFDGNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVES 488 E + R D VS AE++P+ + GL + R W + LA + Sbjct: 589 EALLRWRDPERGLVSPAEFVPLAEETGLILPIGLWVLEEACRAGRAWLDVGLAPGRIAVN 648 Query: 489 LIRPRFQRWLRDT----LMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVA 544 + P+ +R D ++ + +E+ E + + + + + ALGV VA Sbjct: 649 VAAPQIERGGFDQAVARVLSASGLPPAALEVEITEGSLLRSAENARLAVAALRALGVGVA 708 Query: 545 VNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATG 604 ++ G S +++K L V+ LK+ VR++ N + ++++ C V A G Sbjct: 709 IDDFGTGYSSLAYLKNLAVQTLKIDREFVRDLPHDAGNLAITRAIIAMCRSLGFGVVAEG 768 Query: 605 VRSRSEWQTLIQRGVTGGQGDFFASSQP 632 V ++ L+ G T QG FA P Sbjct: 769 VEEPAQAAFLVSEGCTLAQGYLFAKPMP 796 >UniRef50_A6CPZ0 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CPZ0_9BACI Length = 975 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 92/429 (21%), Positives = 177/429 (41%), Gaps = 18/429 (4%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + + + I A D +TGL NR+ F + +K V+ + + F +++D Sbjct: 530 EQKKTEEKITYLAYFDAETGLPNRIKFRELAEEFISRAKKKKRRIGVLFLDIDRFKLIND 589 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKA 331 T GHS ++ L + + + GA L R+ F L+ E +LI Sbjct: 590 TLGHSAGDQILIELAERIKNALPK--GAYLGRFGSDKFTILISKNVTNEKLKQVAELIAE 647 Query: 332 VDTLP---NNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDS 388 +P N+ I +G+ G D ++++A++A A GG+ Y + Sbjct: 648 NIQMPIIQGNQEFYIKASIGVGVYP-DHGTDLADLLKNADTALNWAKSNGGDQIVFYTNE 706 Query: 389 LPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCR---IFDGNEEVSS 444 + V+ + + + L R + +P V + +V E + R + G VS Sbjct: 707 MNIMAMEKVKMESYLRKALEREELYIVYQPIVELNDKRVIGAEALLRWNHPYLG--VVSP 764 Query: 445 AEYMPMVLQFGLSEEYDRLQISRLIPLLRYW-----PEENLAIQVTVESLIRPRFQRWLR 499 E++P+ + GL ++ + W P+ +++ V+ +P F + Sbjct: 765 MEFIPLAEETGLIGSIGNWVLTEACKQAKEWQEKGFPDFYISVNVSANQFQQPSFTNEIN 824 Query: 500 DTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIK 559 L S + + +EL E+ + QH + + ALGV++A++ G S ++K Sbjct: 825 HALKTSGLSA-ESLCLELTESVMIQHSGHTIDRMEELAALGVKIAIDDFGTGYSSLGYLK 883 Query: 560 ELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGV 619 L + +LK+ V+NIE+ + + +VQ++ G QV G+ + + L Sbjct: 884 HLPLHVLKIDKSFVQNIEESSPDYAIVQAVSMMGKGLGMQVVVEGIETSEQMVLLSHLNC 943 Query: 620 TGGQGDFFA 628 GQG F + Sbjct: 944 DLGQGYFIS 952 >UniRef50_UPI0001C31434 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31434 Length = 769 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 100/432 (23%), Positives = 179/432 (41%), Gaps = 18/432 (4%) Query: 215 RLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWG 274 R + + A D TGL NR F +L + G G V++I L F ++DT G Sbjct: 323 RFEGQLAYLADHDALTGLYNRRAFQRELEQRTSED---GRGGAVVVIDLDHFKDINDTLG 379 Query: 275 HSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVD- 333 H+ +E + LL+ + + +L R +FA LL + +EAE++ +L++ V Sbjct: 380 HAAGDEVIVRVARLLAKRLRKTD--VLGRLGGDEFATLLSGVSREEAEAVIAELLRVVRE 437 Query: 334 ---TLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLP 390 + + I + + E+++ A+ A +A G + AI ++ Sbjct: 438 QSVVVEGGHPIGLTASAGIALFEGDTPLSGEELLVSADIAMYDAKEAGRDRHAISVETEQ 497 Query: 391 EKGRGNVR--WRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRI-FDGNEEVSSAE 446 + + R W + L G L+Q+P V R G EL+ R+ D E + A Sbjct: 498 RQAQMTERMAWSQRMRDALEHDGFVLFQQPVVDLRTGLPKCHELLLRMRGDDGELIPPAA 557 Query: 447 YMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN----LAIQVTVESLIRPRFQRWLRDTL 502 ++P+ + GL E DR R I + LA+ ++ S+ P + L Sbjct: 558 FLPIAERSGLIAEIDRWVTRRAIATIAAQEAAGRPLRLAVNLSGASVSDPGLLEIIEGDL 617 Query: 503 MQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELN 562 ++ E+ E ++ R + + LG +A++ G S ++K L Sbjct: 618 AAMAPPP-GSLVFEVTETAAIVNLDRARAFAATLAELGCELALDDFGAGFGSFYYLKRLP 676 Query: 563 VELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGG 622 + LK+ +R + E+QL+V+++VE G + A V + + L + V G Sbjct: 677 FDYLKIDGDFIRQLTSSHEDQLVVRAIVEIARGLGKRTVAEFVGDEATLELLRELRVDDG 736 Query: 623 QGDFFASSQPLD 634 QG PL+ Sbjct: 737 QGFHLGRPAPLE 748 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 100/439 (22%), Positives = 192/439 (43%), Gaps = 18/439 (4%) Query: 206 IQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPD 265 I N +H I A D TGL NR+ +++L + + G ++ I L Sbjct: 341 IFNDITEHKNSRAQIEFLAHHDALTGLPNRILLNDRLEMAITQVRRQGEKLGILFIDLDR 400 Query: 266 FNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIA 325 F ++D+ GH V +Q T +R G ++R +F L P ++ ++A Sbjct: 401 FKNVNDSLGHG-VGDQILQEAAKRLTANVR-TGDTVSRLGGDEFVVLFPR--VRTEGNLA 456 Query: 326 GQLIKAVDTLPNNKMLDRDDM---IHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNS 381 IK + L +D + IGI + G+D ++++A++A A +G N+ Sbjct: 457 DLTIKLREQLQLPYTVDGISLHITPSIGIAVYPDDGEDPNTLIKNADAAMYLAKEKGRNN 516 Query: 382 WAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNE 440 + Y +L K ++ + + + G L+ +P + GQ+ E + R + E Sbjct: 517 YQFYTPTLNAKTLDRLKLESDLRSAIDAGDFELHYQPQIIGSSGQLWGLEALIR-WRHRE 575 Query: 441 E--VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE---NLAIQVTVESLI--RPR 493 +S AE++P+ + GL + + + L W + +L + V + +L + Sbjct: 576 RGLISPAEFIPLAEETGLIVGLGDWVLVQAVKQLAEWRRQGHNHLVVSVNISALQFRQGD 635 Query: 494 FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLV 553 F ++ L + + I +EL E + Q + ++ + LG R+A++ G Sbjct: 636 FLDRVKHILQEAQLVP-DAIELELTETMLMQDVQSAIQTLKGLRELGFRIAIDDFGTGFS 694 Query: 554 STSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQT 613 S ++++ L + +LK+ VR + + E+ +V+S++ + A GV +R+E+ Sbjct: 695 SLNYLRHLPINVLKIDQSFVREMLQEPESLAIVESIIALAQALGKETIAEGVETRAEFDV 754 Query: 614 LIQRGVTGGQGDFFASSQP 632 L RG QG FFA P Sbjct: 755 LQARGCRLMQGYFFARPMP 773 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 101/454 (22%), Positives = 194/454 (42%), Gaps = 37/454 (8%) Query: 206 IQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPD 265 IQ+ E+ R + IR A D TGL NR FF QL L + V+ + L Sbjct: 249 IQDITER-KRAEEQIRLLAYYDALTGLPNRRFFLQQLEQALVFANRYDRMLAVLFLDLDR 307 Query: 266 FNMLSDTWGHSQVEEQFFTLTNLLSTFMMR----------YPGALLARYHRSDFAALLPH 315 F +++DT GH + + + L + R P +L++R +F +L Sbjct: 308 FKLVNDTLGHGVGDRLLQDVADRLLRCVRRGDCLARADEECPPSLVSRLGGDEFTIMLSD 367 Query: 316 -RTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDT-EQVMEHAESATRN 373 ++ IA ++++AV + + + IGI + T ++ +A+ A Sbjct: 368 IEHFQDVAKIARRILEAVSVPYSLEGQEVFVSTSIGISLYPFDATTASDLIRNADGAMYQ 427 Query: 374 AGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELM 432 A QG N + IYD+S+ K + + + + L +Y +P V+ + G+V E + Sbjct: 428 AKEQGRNGYQIYDESMNAKALERIILESQLHKALKEEEFIVYYQPQVSNQSGRVVGIEAL 487 Query: 433 CRIFDGNEE--VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW-----PEENLAIQVT 485 R ++ E V ++P+ + GL + D+ + + W P LAI ++ Sbjct: 488 VR-WNSKELGLVEPGRFLPLAEEIGLVIQIDQWVMREACRQHKLWLDAGFPPVTLAINIS 546 Query: 486 VESLIRPRFQRWLRDTLMQCEKSQRKR-------IIIELAEADVGQHISRLQPVIRLVNA 538 Q+++++ L++ S K + +EL E + H R ++ + Sbjct: 547 --------GQQFMKNELLETVTSVLKESGLDPGLLELELTEGVLMAHTERTVKTLQALKG 598 Query: 539 LGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTST 598 +GVR+A++ G S S++K +++LK+ + +I ++ + + +E Sbjct: 599 MGVRLAIDDFGTGFSSLSYLKRFPLDVLKIDRTFINDITTDPDDAAITLATIEMAHTMKL 658 Query: 599 QVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQP 632 +V A GV ++ + L + G QG F+ P Sbjct: 659 KVIAEGVETKPQLDFLTKNGCDMYQGYLFSKPVP 692 >UniRef50_B9MQD5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MQD5_ANATD Length = 1016 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 81/427 (18%), Positives = 184/427 (43%), Gaps = 17/427 (3%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 I A D T L NR F+++L +L++ E T G V++I + +F ++D +GH + Sbjct: 578 IEYIAYYDALTNLPNRKLFEDRLESLIKKAEDEKTQGAVVLIDIDNFKDINDLYGHEAGD 637 Query: 280 EQFFTLTNLLSTFMMRYP-GALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNN 338 E +T + ++ AR +FA +L L + E + K + + Sbjct: 638 EYLIAVTKKILEYLNSIKLNTFFARVGGDEFAVILD--GLAKKEEVIEVCTKLLGIFESE 695 Query: 339 KMLDRDD-----MIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK 392 + + + IG+ + G+ +++ + + A +A G N + I+ + K Sbjct: 696 IYIQKIEGCIFTSASIGVSFYPDDGRSVKEIFRNVDMALSSAKENGKNDFQIFMPFMLMK 755 Query: 393 GRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNEE-VSSAEYMPM 450 + +++ + LY +P + ++ ++H E + R + +S E++P+ Sbjct: 756 NFKKIEIEKSLKKAIEADQFELYYQPVINLKDMEIHSVEALLRWVSPEKGIISPLEFIPV 815 Query: 451 VLQFGLSEEYDRLQISRLIPLLRYWPEE-----NLAIQVTVESLIRPRFQRWLRDTLMQC 505 GL + + I + L+ W ++ ++AI ++ L F++ ++ + + Sbjct: 816 AEDSGLIVKIGEMVIEKAFSDLKNWEKKGISYLHMAINISARQLKTKFFEKMIQKQIERY 875 Query: 506 EKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVEL 565 + +K I E+ E ++ ++ + LG++ ++ G S +++ L + Sbjct: 876 GVNPQK-ISFEITETGAVENFDVSLKILSFLCQLGIKFLIDDFGTGYSSLIYLRRLPIGG 934 Query: 566 LKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGD 625 +K+ + IE E++ +V+ ++ +V A GV ++ E + L + G QG Sbjct: 935 VKIDRSFISEIELSKESRAIVEGIILMAHKLDLKVIAEGVETKRELEILKEIGCDFAQGY 994 Query: 626 FFASSQP 632 F+ P Sbjct: 995 LFSKPVP 1001 >UniRef50_A8UY37 Predicted signal transduction protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UY37_9AQUI Length = 869 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 99/424 (23%), Positives = 180/424 (42%), Gaps = 29/424 (6%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A D TG++NR ++ +A ++ ++M+ + +F ++DT+GH QV + Sbjct: 454 ATTDPLTGVSNRRVLEHDIAKFGRLVKRYNKSMSLIMVDIDNFKGINDTYGH-QVGDVVL 512 Query: 284 TLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDR 343 L +R + RY +FA L P A +A ++ + + +D Sbjct: 513 KKVAKLIEESVRETDTVY-RYGGEEFAVLCPETDKLGAYELAERIREKIR--ETKFWIDT 569 Query: 344 DDMIHI----GICAWRSGQDT-EQVMEHAESATRNAGLQGGNSWAIYDDS-----LPEKG 393 +I+I G+ + D ++++ A+ + A +G + AI DS E+ Sbjct: 570 SRVIYITVSLGVASVPEDTDNPDEILAIADISLYRAKSEGKDRTAILTDSSDKRLFVERF 629 Query: 394 RGNVRWRTLIEQMLSRGGPRLYQKPAV--TREGQVHHRELMCRIFDGNEEVSSAEYMPMV 451 + RT I R G L+ + R GQV EL+ R+ DG+ + +++ V Sbjct: 630 KREKELRTYI-----RSGKTLHHLQPIYDLRRGQVFGYELLFRVVDGDRLYTMGDFITHV 684 Query: 452 LQFGLSEEYDRLQISRLIPLLRYWPEENLA--IQVTVESLIRPRFQRWLRDTLMQCEKSQ 509 G+ E+ DRL +SRL+ LL Y N I V+ SL R R + L + Q Sbjct: 685 EDLGIIEDIDRLTVSRLLKLLSYEELSNYCFFINVSPRSLDRGR----ILSELNLIPRHQ 740 Query: 510 RKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKEL--NVELLK 567 R R+ +E+ E + I + + R+ ++ G S S ++ ++L+K Sbjct: 741 RPRVYVEITERETFMDTEEALRHIEELKNMNFRIVLDDFGSGFSSISQLRYFVKYLDLIK 800 Query: 568 LHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFF 627 + V+ I + N+ +V+S+ S + A + E + G+ GQG FF Sbjct: 801 IDGSFVKRIHRDPYNRAIVESVKIMADRFSIDLVAEFIEREEELNVVKVIGIRFGQGFFF 860 Query: 628 ASSQ 631 + Sbjct: 861 GKEE 864 >UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNS8_9GAMM Length = 944 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 102/424 (24%), Positives = 171/424 (40%), Gaps = 19/424 (4%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 IR A D TGL NR ++L L + + HG V+ I L +F ++DT GH+ + Sbjct: 498 IRRLAFFDGLTGLPNRTLLHDRLGQALANTARTRHHGAVLFIDLDNFKDINDTLGHAVGD 557 Query: 280 EQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL------PHRTLKEAESIAGQLIKAVD 333 + + + + LAR +F +L P R EAE++ +LI + Sbjct: 558 DLLCQVARRMENSVRE--ADTLARLGGDEFVIILNDLHPDPARAATEAEAVGRKLINLLR 615 Query: 334 TLPNNKMLDRDDMIHIGICAWRSGQD--TEQVMEHAESATRNAGLQGGNSWAIYDDSLPE 391 +R IG + SG+ E+V++ A+ A A G N+ YD L Sbjct: 616 EPFQLAGQNRHVTPSIGATLF-SGRSLGVEEVLKQADLAMYRAKNAGRNTVRFYDPELHR 674 Query: 392 KGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNE-EVSSAEYMPM 450 + L + +P V EG+V EL+ R +S AE++P+ Sbjct: 675 AVEARFELENELRHALDEDRFSVVYQPQVDAEGRVIGAELLLRWEHAQRGAISPAEFIPV 734 Query: 451 VLQFGLSEEYDRLQISRLIPLLRYWPEE------NLAIQVTVESLIRPRFQRWLRDTLMQ 504 Q GL R + L W L++ ++ P F LR+ ++Q Sbjct: 735 AEQTGLIVPIGRKVLRTACAQLGAWQHTAAFRDLTLSVNISARQFRDPHFVPHLRE-ILQ 793 Query: 505 CEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVE 564 + R+ +EL E+ + + I + I + ALGV A++ G S +++K+L + Sbjct: 794 ETGAPGDRLKLELTESMLLEEIDTVVAHIDELRALGVEFALDDFGTGYSSLAYLKQLPLA 853 Query: 565 LLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 LK+ VR++ + + Q +V V A GV + + L G QG Sbjct: 854 QLKIDQSFVRDVLDDPNDAAIAQMVVNLARTLDLDVIAEGVETVEQRAFLFGLGCRHFQG 913 Query: 625 DFFA 628 + Sbjct: 914 FLYG 917 >UniRef50_D2LWI2 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LWI2_BACS4 Length = 762 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 90/428 (21%), Positives = 193/428 (45%), Gaps = 20/428 (4%) Query: 218 TLIRSYAAQDVKTGLNNRLFFDNQLATLL--EDQEKVGTHGIVMMIRLPDFNMLSDTWGH 275 T I+ A D TGL+NR F ++ ++ E Q+++ ++ I + F ++D GH Sbjct: 328 TEIQKLALTDELTGLSNRNDFRSRFEVMVKAEAQQRIA----ILFIDIDLFKRINDALGH 383 Query: 276 SQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTL 335 + + L + P A++ R+ +F LP +E +++ QL+ + Sbjct: 384 YVGDTVIKETSKKLKENIP--PDAIVGRWGGDEFIVALPFEEEREVVTLSKQLLLDIARP 441 Query: 336 PNNKMLDRDDMIHIGIC-AWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGR 394 K + IGI A ++ E ++ A+ A A G N + Y D + + Sbjct: 442 IVMKGYTFEITSSIGISTAPNDAKEPEDLIRQADIAMYEAKRHGKNQYRFYQD-VAKYAY 500 Query: 395 GN--VRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNE-EVSSAEYMPMV 451 N V + L +Y +P + +G V E + R + ++ + +++P+ Sbjct: 501 FNHYVSLENDLRYALQNNEFNIYYQPIMNADGNVLGVEALLRWENRDKGMIPPDKFIPVA 560 Query: 452 LQFGLSEEYDRLQISRLIPLLRYWPE---ENLAIQVTVES--LIRPRFQRWLRDTLMQCE 506 + G+ + + I ++ W E E++++ V V L+ F ++ TL +C+ Sbjct: 561 EELGMMPFIGKWVLKESIRQVKRWHELGYEDISLSVNVSKTQLVSNDFCSIVKTTLEECD 620 Query: 507 KSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELL 566 + +++E+ E+DV ++ +L +++ +GV+++++ G+ S ++KE+ V+ L Sbjct: 621 FPP-ELLVLEITESDVAIYMEKLTLASKVLTEMGVKISLDDFGMGASSLHYLKEIFVDQL 679 Query: 567 KLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDF 626 K+ V I + + L+ +V C +V A G+ + ++ L + ++ QG + Sbjct: 680 KIDRSFVNGIPSDSFDSALLSGIVTLCKKLKIEVVAEGIETEEQYIYLKEDNIS-LQGYY 738 Query: 627 FASSQPLD 634 F+ P D Sbjct: 739 FSKPLPKD 746 >UniRef50_B9JZ37 GGDEF family protein n=1 Tax=Agrobacterium vitis S4 RepID=B9JZ37_AGRVS Length = 800 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 101/426 (23%), Positives = 179/426 (42%), Gaps = 27/426 (6%) Query: 221 RSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEE 280 R A D TGL NR F+N+L +E ++ G + + L F ++D GH + Sbjct: 348 RRQAMTDHLTGLLNRQGFENELDVQIEATDRQGGSLACLFVDLDRFKWINDNLGHHAGDT 407 Query: 281 QFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK-EAESIAGQLIKAVDTLPNNK 339 L +++ + ++ AR +FA LL + A ++A + +T K Sbjct: 408 TLKILVDMIVHLLPE--NSVAARIGGDEFAILLRANDCETAARAVANDICGIFETPFIVK 465 Query: 340 MLDRDDMIHIGICAWRSGQDTE-QVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVR 398 IGI + +T ++++ A+ A N G N + I+DDS+ R Sbjct: 466 GTATRLSASIGIALYPQHAETATELLQKADMAMYNRKRDGKNGFQIFDDSIGNTTRRRAE 525 Query: 399 WRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCR-------IFDGNEEVSSAEYMPM 450 +IEQ LS + +P + + G+ E + R I E +S AE Sbjct: 526 IEQMIEQALSNDWLDAFLQPIIDLQSGKTVGYEALMRLRHPVHGIMAPTEIISLAEETGT 585 Query: 451 VLQFGLSEEYDRL--QISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDT--LMQCE 506 + G + +D+ +RL L LA+ V+ + I WL L + Sbjct: 586 IHDIG-KQVFDKALDHFTRL-SALSGDTTSYLALNVS-PTQIDASLLVWLASAVHLFNID 642 Query: 507 KSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELL 566 S RIIIE+ EA + +Q V++ + G R+A++ G S S++ V ++ Sbjct: 643 PS---RIIIEITEATLLHDSPHIQTVLQKIGDFGCRIALDDFGTGYSSLSYLSRFPVNII 699 Query: 567 KLHPGLVRN-----IEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTG 621 K+ +R+ ++ R +++L++ + V A G+ ++ +W+ L GV Sbjct: 700 KIDQSFIRSMTGDTLDLRERSRMLIEGIAAISHKMKCTVVAEGIETKEQWRALQAIGVDY 759 Query: 622 GQGDFF 627 GQG F Sbjct: 760 GQGYLF 765 >UniRef50_Q2BQ13 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) withPAS/PAC sensor n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQ13_9GAMM Length = 1010 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 105/447 (23%), Positives = 182/447 (40%), Gaps = 22/447 (4%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 LL +I +EQ +L+ LI ++ D TGL NR L + + K V Sbjct: 549 ALLSDITTIKEQQKKLE-LIANF---DPLTGLPNRRHIIELLHEGMANAMKQMKTLAVFY 604 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL---PHRT 317 + L F ++DT+GH ++ TL N +S M + ++ R +F P+ Sbjct: 605 LDLDGFKDINDTYGHEYGDQLLVTLANRMSKAMGQQD--IVGRVGGDEFIGAFFEEPNSV 662 Query: 318 LKEA-ESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGL 376 + I QL K + L I + + + D ++++ A+ A A L Sbjct: 663 FTDKLHHILEQLAKPI--FVEGYKLQVSASIGVTLYPQQRSTDADKLVREADQAMYQAKL 720 Query: 377 QGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRI 435 G N + +D + RG + I + L RG L+ +P V GQ+ E + R Sbjct: 721 AGKNRYHFFDAEKDQYIRGQHQALEDIRRALERGEFVLHYQPKVNMFTGQICGAEALIR- 779 Query: 436 FDGNEE--VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVE----SL 489 + EE + +++P + LS + D I + + W I V+V L Sbjct: 780 WQHPEEGLIMPGDFIPTISAHPLSVDLDEWVILTALKQIELWLHSGFDIPVSVNISPLQL 839 Query: 490 IRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAG 549 F + L L + R R+ IE+ E+ +++S I ALG+ +++ G Sbjct: 840 QDSEFSKRLEKLLHTVSPAARTRLSIEVIESHALENMSTALNAIEESKALGISFSLDDFG 899 Query: 550 LTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRS 609 S S++K L VE LK+ V + E+ ++ + + ++ GV S Sbjct: 900 TGYSSMSYLKRLPVEELKVDRSFVHGMLNNQEDLAILSATIGLAKAFDKKILVEGVESEE 959 Query: 610 EWQTLIQRGVTGGQGDFFASSQPLDTN 636 + Q L+ G QG F S+P+ + Sbjct: 960 QGQRLLSLGYQEAQGYFI--SKPISAD 984 >UniRef50_B9ZMB9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZMB9_9GAMM Length = 817 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 106/436 (24%), Positives = 182/436 (41%), Gaps = 22/436 (5%) Query: 215 RLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWG 274 R+ + A D TGL NR F+ +L L E+ T + + L F +++DT G Sbjct: 370 RMTQQLNHQATHDELTGLCNRREFERRLDEALRTLEEGDTPHALFYMDLDQFKIINDTCG 429 Query: 275 HSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDT 334 H + L +LL + LAR +F LL H ++ AE+I +L+ Sbjct: 430 HQAGDALLRELADLLPAHI--RDSDTLARLGGDEFGLLLRHCPVERAEAIGNKLLATAQG 487 Query: 335 LPNNKMLDRDDM-IHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGN---SWAIYDDSL 389 L + R D+ + IG+ GQ+ +V+ A+SA A G N +W D L Sbjct: 488 LRFSWEGRRFDVGMSIGLVPIEGPGQNLPEVLSQADSACYVAKDLGRNRLYTWKPSDQIL 547 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQ---VHHRELMCRIF--DGNEEVSS 444 + G + W + L Y +P G + H E++ R+ DG ++ Sbjct: 548 -RRRHGEMEWVGRLRAALEEARFVAYAQPVKPLNGADLPLDHVEILLRLHGEDGT-LITP 605 Query: 445 AEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-------LAIQVTVESLIRPRFQRW 497 ++P ++ L E DR + + L + N ++I ++ +SL + + Sbjct: 606 GAFIPAAERYHLMPEIDRHVVELVFRQLADHRDRNPHHAPVVVSINLSGQSLAQDGMLEF 665 Query: 498 LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 + + Q + Q ++II E+ E H R Q +IR + +G R +++ G L S + Sbjct: 666 ITSRMSQF-RIQAQQIIFEVTETAAISHHDRAQGLIRALRYMGCRFSLDDFGSGLSSFGY 724 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 +K L V+ LK+ VR+I + +V ++ + A V S L + Sbjct: 725 LKNLPVDFLKVDGSFVRDIATNAVDAAMVTAIHRVGHVLGLRTIAECVESEETMHHLREI 784 Query: 618 GVTGGQGDFFASSQPL 633 G+ QG A PL Sbjct: 785 GLDFVQGYHLAKPIPL 800 >UniRef50_C5BN58 Predicted signal transduction protein, with PAS, HAMP, GGDEF and EAL domainsl n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BN58_TERTT Length = 807 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 95/435 (21%), Positives = 178/435 (40%), Gaps = 42/435 (9%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A D T L NR FF L + +K VMM L DF ++DT+GH ++ Sbjct: 372 AFYDPLTDLPNRRFFRGHLELTIAAAKKYDKRLAVMMTDLDDFKKINDTFGHDAGDQLLM 431 Query: 284 TLTNLLST------FMMRYPG-ALLARYHRSDFAALLPH------RTLKEAESIAGQLIK 330 + L + R G + D ++ L H R L+E I GQ ++ Sbjct: 432 QIGKRLKAASASIDVVSRMGGDEFMLLVKNIDSSSQLDHKANNILRALREKMEINGQQVE 491 Query: 331 AVDTLPNNKMLDRDDMIHIGICAWRSGQDT-EQVMEHAESATRNAGLQGGNSWAIYDDSL 389 + IGI + + T E+++ +A+ A NA GGN+ + Y L Sbjct: 492 VGGS--------------IGIAVFPNDAITYEELIRYADIALYNAKSMGGNTVSYYSSDL 537 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKP---AVTREGQVHHRELMCRIFDGNEEVSSAE 446 ++ + +R + L + +Y +P A TRE + E + R D E S E Sbjct: 538 DKRIKDKMRLEQKLRVALDKRLLEVYIQPIYDAATRE--MIKGEALVRWMDPEEGFISPE 595 Query: 447 -YMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE-------NLAIQVTVESLIRPRFQRWL 498 ++ + + GL + L + ++ L + +A+ ++ + ++ Sbjct: 596 VFVSLAEESGLIYDLGSLVLEKVCAYLHEHEGKLHLLGMRTIAVNLSARQFFASQLVTYI 655 Query: 499 RDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWI 558 T Q + K+I EL E+ V + + ++R + LG ++++ G S S++ Sbjct: 656 EATFKQYQIDP-KQIEFELTESMVMDDVDQAIDIMRAIRNLGCSLSIDDFGTGYSSLSYL 714 Query: 559 KELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRG 618 K+ + LK+ +++I + + + +++ V A GV ++ +WQ L + Sbjct: 715 KQFPINTLKIDRSFIKDIPEDKNDVEIAYTIIAMAHNLGLTVVAEGVETKEQWQLLRDKN 774 Query: 619 VTGGQGDFFASSQPL 633 QG +FA P+ Sbjct: 775 CDYLQGYYFARPMPM 789 >UniRef50_Q087E2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Alteromonadales RepID=Q087E2_SHEFN Length = 681 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 105/466 (22%), Positives = 211/466 (45%), Gaps = 43/466 (9%) Query: 197 SALDTLLR----EIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKV 252 S+L+T ++ E++NA Q + YA QD T L NR +F +L +L++ V Sbjct: 228 SSLETEVKLRTGELENANSQ-------LHEYAYQDGLTLLPNRRYFYEKLQSLIDTDHMV 280 Query: 253 GTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGAL-----LARYHRS 307 ++ I L F ++D+ GH + LL R G + +AR Sbjct: 281 FA---LIFIDLDGFKEINDSLGHEYGDR-------LLHQVAKRLRGCVRDHDTVARLGGD 330 Query: 308 DFAALLPHRT-LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVME 365 +F ++ + L+ A SIA ++ ++ + + + + IG+ + + GQ+ E +++ Sbjct: 331 EFTLIIEDVSDLEHAASIAEKVKSSLMQCISIEEVQVNVTGSIGLTFYPADGQNVEALVK 390 Query: 366 HAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQM---LSRGGPRLYQKPAVTR 422 HA+ A + +G N + + ++ E+ + R LIE++ L G L+ +P + Sbjct: 391 HADQAMYLSKSKGRNRYEFFSHAIEEQA---IEKRRLIEEIRIALKLGQFVLFYQPIFDQ 447 Query: 423 EG-QVHHRELMCRIFDGNEE--VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPE-- 477 G V E + R +D + + E++P+ Q GL EE ++ I ++ + Sbjct: 448 CGVTVTKAEALIR-WDHPQRGLIGPNEFIPVAEQNGLIEEIGNWVRNQAIEDAAHFYQLS 506 Query: 478 -ENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQ--RKRIIIELAEADVGQHISRLQPVIR 534 + + V L W+ + ++ C K R +IIE+ E + S +Q + Sbjct: 507 GNKMQVSVNTSPLQIDHEGLWVDEWILACNKFNLPRDTMIIEVTENTLMDPDSPIQQQML 566 Query: 535 LVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACS 594 +N G+ +A++ G+ S ++++ L++++LK+ ++++E + LV++++ Sbjct: 567 RLNNYGIDIAIDDFGVGYSSLAYLQRLDIDILKIDRSFIKHMESNENSIALVRAIITMAH 626 Query: 595 GTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 +V A GV + + Q L Q QG FA P + +Y Sbjct: 627 HLKVKVVAEGVETIGQHQLLQQLSCDYLQGYLFAKPMPTQNFIDRY 672 >UniRef50_D2M2P9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M2P9_BACS4 Length = 696 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 92/430 (21%), Positives = 185/430 (43%), Gaps = 26/430 (6%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 I A D T L NR +F+ QL L+D + + V+ I + F ++DT GH + Sbjct: 264 IHHMAYHDYLTDLPNRRYFEEQLEAELQDAKTNRSKLAVLFIDIDRFKFINDTLGHHVGD 323 Query: 280 EQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPNN 338 + + +L + + L+AR +F L+PH L + +A ++K +++ Sbjct: 324 KALKEIAEMLVSLVSE--KDLIARMAGDEFMILVPHIEALDYVKELADSILKRMES---P 378 Query: 339 KMLDRDDMI---HIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGR 394 + D ++ IGI + SG+D ++++A+ A A NS+ + + E Sbjct: 379 IVFDHYELFVTGSIGISTYPESGEDISVILKNADLAMYKAKETKENSFEFFTPEMEENSY 438 Query: 395 GNVRWRTLIEQMLSRGGPRLYQKPAVTREGQ-VHHRELMCRIFDGNEE----VSSAEYMP 449 N + + + ++ LY +P V+ + V E + R N VS ++P Sbjct: 439 KNFALQNDLRRAITNNEFELYYQPKVSASTEKVVGVEALIR---WNHPTLGMVSPGHFIP 495 Query: 450 MVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQC---- 505 + GL + ++ W EN V SL Q + + + Sbjct: 496 IAEDTGLIVPIGEWVFDAVCKQVKRW--ENTGFPPLVVSLNFSAIQMLQKGLVTKVKNLL 553 Query: 506 EKSQRKR--IIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNV 563 EK+Q + I +E+ E+ + +H + + + + LG+ +A++ G S S++K+ Sbjct: 554 EKNQVEGHWIEVEMTESLILEHDNDILNKLEGLKQLGIHIAIDDFGTGYSSLSYLKKYKF 613 Query: 564 ELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQ 623 +KL + +I +NQ ++ +++ + + +V A GV + + L + Q Sbjct: 614 NTIKLDKSFINDIHTSADNQAIITFIIQLSNQLNMKVVAEGVEIKEQHDILQKLNCDELQ 673 Query: 624 GDFFASSQPL 633 G +F+ +P+ Sbjct: 674 GFYFSRPKPV 683 >UniRef50_Q3ILC0 Putative orphan protein ; putative sensory-box domain n=3 Tax=Alteromonadales RepID=Q3ILC0_PSEHT Length = 843 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 108/491 (21%), Positives = 202/491 (41%), Gaps = 45/491 (9%) Query: 158 LQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLD 217 LQ + Q +E R I N + + TI R + L Sbjct: 359 LQHKNGSQIWVECRLQLIQNSHNNATITATIDNIHERKQAELQ----------------- 401 Query: 218 TLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIV----MMIRLPDFNMLSDTW 273 +R A D TGL+NR +FD QL + + Q TH + + I L F +++D+ Sbjct: 402 --LRHLALHDTLTGLHNRYYFDQQLNRICQPQH---THSDIEHALIYIDLDHFKIINDSK 456 Query: 274 GHSQVEEQFFTLTNLLSTFMMRYPGA-LLARYHRSDFAALLPHRTLKEAESIAGQLIKAV 332 GH Q + L + F+ L+ R +FA +L H L +A IA + A+ Sbjct: 457 GHQQGD---IVLKEVAQLFITNISTEHLVFRVGGDEFAVILKHTNLLDAHLIAEGICNAI 513 Query: 333 DTLPNNKMLDRDDMIHIGICAWRSGQDTE------QVMEHAESATRNAGLQGGNSWAIY- 385 + ++ I+ C+ Q TE + ++ A+ A A G N Y Sbjct: 514 E----QNQFKSEEQIYSISCSIGLTQITEKNCDPSECLKQADIALYIAKNLGRNLVHCYA 569 Query: 386 -DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNEEVS 443 D+ + + W I Q L + L+ +P R +V + E++ R+ +E V Sbjct: 570 KQDAHNNTLQTGLEWGHGIRQALQQDSIELHYQPIWDFRRNEVAYFEVLLRLKINDELVF 629 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-LAIQVTVESLIRPRFQRWLRDTL 502 +++P + + D+ I I + +PE N +AI ++ +S + R + L Sbjct: 630 PNQFIPSLEMLNDTFLMDQCVIRNTIANVALYPELNQVAINLSAQSFLDERLVPLIESNL 689 Query: 503 MQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELN 562 + + +II E+ E+ +++ + +I +N LG +++ G + +++K+L Sbjct: 690 AKYQ-VLPTQIIFEITESASINNLAATRKMIEKLNILGCHFSIDDFGTGFSTFNYLKQLP 748 Query: 563 VELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGG 622 + +K+ V ++ + LV+++ + + A V + + L + GV G Sbjct: 749 AQHVKIDGSFVCDMLNDPIDLALVKAINDISHSLDKRSVAEYVETEEVFFALKEIGVDYG 808 Query: 623 QGDFFASSQPL 633 QG F A P+ Sbjct: 809 QGYFIARPMPI 819 >UniRef50_C1D4V4 AL:histidine kinase, HAMP region n=2 Tax=Neisseriaceae RepID=C1D4V4_LARHH Length = 633 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 102/418 (24%), Positives = 174/418 (41%), Gaps = 25/418 (5%) Query: 216 LDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGH 275 +DTL R D TG+ NR + ++L ++ G G ++++R L+ G Sbjct: 227 VDTLRRERLT-DRTTGVANREALEQTYSSL--QAQEGGASGWLLLLRAASLTELNQRLGG 283 Query: 276 SQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTL 335 + + L LL R L AR +DFA L P +AES+A QL + Sbjct: 284 QRADALLKHLAQLLEQASQRGRHGLAARLRGADFALLCPEIDQTQAESLARQLAGELALC 343 Query: 336 PNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAI-YDDSLPEKGR 394 + D++++ H+G+ + G+ ++ A A A QG N W + +++P Sbjct: 344 QQMGLSDQENVAHMGLTPFAPGESLPALLGRANHALTQAEAQGVNRWQLDSSNAVPVSSE 403 Query: 395 GNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRE-LMCRIFDGNEEVSSAEYMPMVLQ 453 + WR LIE + +L P + R+ QV +E ++ R G+E +A + Sbjct: 404 HD--WRELIETACRQHELQLRWYPVIGRDRQVRWQEGMLYRPVQGSEPAINALRLLSHSL 461 Query: 454 F-------GLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCE 506 L+ + LQ + P+ AI ++ SL PRF + ++L Sbjct: 462 RLNLTHLPDLAALHCALQAHDVGPV--------RAINLSPASLAHPRFLPSITESLGSVR 513 Query: 507 KSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELL 566 Q + E E + +H + + LG RVAV G L + + + L Sbjct: 514 GLQ---LSFEFHEIGLTEHWEAFLAFSQAIRMLGHRVAVEILGHNLELVARLNSSGISYL 570 Query: 567 KLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 + L R+I++ Q L++ L+ S ++ A GV + TLI+ GV G G Sbjct: 571 VIDGSLTRDIDQDAGRQNLLRGLLRMTGLMSVELIAKGVSRPEDLATLIELGVDGLTG 628 >UniRef50_Q0AAU4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU4_ALHEH Length = 723 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 97/426 (22%), Positives = 183/426 (42%), Gaps = 15/426 (3%) Query: 217 DTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHS 276 ++++ A D+ TGL NR ++LA L + V+ + L F +++D+ GHS Sbjct: 283 ESIVHYQAHHDLLTGLPNRALLKDRLAQALARARRGNEEVAVLFLDLDRFKVVNDSLGHS 342 Query: 277 QVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLP 336 ++ + L + G LAR +F LLP + A Q K +D L Sbjct: 343 VGDQLLQQVAQRLRACLRE--GDTLARLGGDEFTLLLPAIPDRPAVERVAQ--KCIDALE 398 Query: 337 NNKMLDRDDM---IHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK 392 M+ + + IGI + G+ E +++HA+ A + G + +D ++ + Sbjct: 399 QPFMVHNHRLFLGVSIGIALFPEHGETLETLIKHADVAMYHVKEHGKGHYTFFDQAMGSR 458 Query: 393 GRGNVRWRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCR-IFDGNEEVSSAEYMPM 450 ++ T + + L + R+ +P V G+V E + R EVS E++P+ Sbjct: 459 IDHHLNMETGLRRALEQHEFRVAYQPQVDVVSGRVTGMEALIRWQHPETGEVSPREFIPV 518 Query: 451 VLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQ-CEKS- 508 Q GL + L WP+ N +++ V QR D + C+++ Sbjct: 519 AEQTGLILPIGEWLLRSACEELLRWPDGNEGLRLAVNLSPLQVHQRDFVDRVRAICDETG 578 Query: 509 -QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLK 567 +R+ +E+ E + + + + +R ++ LGV + ++ G S +++ L + LK Sbjct: 579 FPLRRLDLEITENLLMRDVESVVEKLRTLSRLGVTITIDDFGTGYSSLGYLQRLPIHALK 638 Query: 568 LHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFF 627 + V I + E LV++++ G V A GV ++ + L + QG +F Sbjct: 639 IDQSFVHAIRENEEKGTLVETIIAMAHGLGLNVVAEGVETKRQLDYLRRLQCGRMQGFYF 698 Query: 628 ASSQPL 633 S PL Sbjct: 699 --SYPL 702 >UniRef50_Q2SLT6 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SLT6_HAHCH Length = 928 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 114/506 (22%), Positives = 220/506 (43%), Gaps = 51/506 (10%) Query: 153 LAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQ 212 L WL +G+ ++ R R S V + + + SS L ++ +I + + Sbjct: 430 LGENWLPSLQSGKTVIAARR----GDNRSSLVEMYVSDIKDKASSYLYLIVHDITDRK-- 483 Query: 213 HSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDT 272 R + IR A D T L NR + L +L+ ++ V+ I L F ++D Sbjct: 484 --RSEEQIRLQAYYDPLTRLPNRSYLFEHLNSLIASHKREQARLAVLFIDLDRFKQVNDN 541 Query: 273 WGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKA 331 GH ++ ++ L + + +LAR +F +LPH R +A +A L++ Sbjct: 542 LGHGVGDKLLQQVSTRLKSRLRE--SDMLARLGGDEFTVVLPHLREETDAIHVAKMLLQQ 599 Query: 332 VDTLPNNKMLDRDDMIHIGICAW-----RSGQDTEQVMEHAESATRNAGLQGGNSWAIYD 386 + + D +HIG + G+D ++++A+ A A G N + ++ Sbjct: 600 L----ADSFSVGDYELHIGASIGVTLFPKDGEDASTLIKNADIAMYKAKDNGRNQYRFFE 655 Query: 387 DSLPEKG------RGNVRWRTLIEQMLSRGGP-------RLYQKPAV-----TREGQVHH 428 + + E G++R T EQ P RL A+ R G++H Sbjct: 656 ERMNEAVASRLMLEGDIREATQNEQFHLEFQPIIDLKNMRLAGAEALLRWLHPRFGELHP 715 Query: 429 RELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVES 488 RE M + V +E++ + L+ E+ + + P + A+ ++ Sbjct: 716 REFMSIAEETGNIVQISEWL-LQNALNLAAEWQYSRPAGQQPFI--------AVNMSRRQ 766 Query: 489 LIRPR-FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQ 547 LI + +RW RD + Q E +++EL E ++ + + ++ +GVR++++ Sbjct: 767 LISSQHIKRW-RDIIRQSEVPPSS-LVLELTEHNLLNEFEESRRCLIELHQMGVRLSLDD 824 Query: 548 AGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRS 607 G S + +K+L + +LKL L+RN+ ++T+ ++L+ +LV+ ++ A GV + Sbjct: 825 YGHGASSLTLLKDLPISMLKLDGLLIRNLGRQTKEEVLMDALVKMGRAMDMKIVAEGVET 884 Query: 608 RSEWQTLIQRGVTGGQGDFFA-SSQP 632 + L + G GQG F+ +QP Sbjct: 885 PQQLAVLRESGCDYGQGYLFSPPTQP 910 >UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium extorquens group RepID=B7KTV8_METC4 Length = 772 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 99/422 (23%), Positives = 185/422 (43%), Gaps = 18/422 (4%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 I A D TGL NR F L L D ++ V+ + L F ++D +GH + Sbjct: 340 IAHLAHHDALTGLPNRAFMSESLHQALRDPDRACLA--VLSLDLDGFKAVNDRYGHPGGD 397 Query: 280 EQFFTLTNLLSTFMMRYPGALLARYHRSDFAAL-LPHRTLKEAESIAGQLIKAVDT-LPN 337 ++ L + G ++AR+ +F L + + E E +A +LI+++ T +P Sbjct: 398 ALLTSVAERLQNEV--SGGDIVARFGGDEFVVLNVAFTSPSEVEDLARRLIESLSTPVP- 454 Query: 338 NKMLDRDDM---IHIGIC-AWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKG 393 LD + + + IGI A G+ E+++++A++A A G ++ ++ + K Sbjct: 455 ---LDNESVTIGVSIGIAFAPTDGRTAEELLKNADAALYRAKTAGRGTFRFFEPEMDRKL 511 Query: 394 RGNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFDGNEE-VSSAEYMPMV 451 + R + L+R RL +P V E G + E + R +S E++P+ Sbjct: 512 QARQRLVQDLRNALTRDELRLDYQPFVKSETGVISGCEALLRWRHPERGMISPVEFIPLA 571 Query: 452 LQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESL-IRPRFQRWLRDTLMQCEKSQR 510 + GL I + WP I V V + R R + + Sbjct: 572 EESGLIVPIGMWVIQQACREAASWPS-TYRISVNVSPVQFRSRDLPQVILAALTSSGLAP 630 Query: 511 KRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHP 570 R+ +E+ EA + ++R + +LGVRVA++ G S S+++ + +K+ Sbjct: 631 ARLEVEVTEAVLIDDADTALEILRQIRSLGVRVALDDFGTGYSSLSYLRRFPFDKIKIDR 690 Query: 571 GLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASS 630 V+ ++ R ++Q++VQ++ + G V A GV + + + L Q G QG ++ Sbjct: 691 SFVQELDTRHDSQVIVQAIRDMAQGLGMTVTAEGVETDDQAKRLRQTGCEELQGFLYSRP 750 Query: 631 QP 632 +P Sbjct: 751 RP 752 >UniRef50_C7RQM1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQM1_9PROT Length = 455 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 104/440 (23%), Positives = 184/440 (41%), Gaps = 15/440 (3%) Query: 215 RLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWG 274 R DT+ + D TG +R A L+ D + + + F +++++G Sbjct: 17 RFDTIPAANPTLDPVTGFLSRTAGLQAAAVLIADVGARQARLCAIWLDIDRFRQVNESFG 76 Query: 275 HSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVD- 333 H+ + + + + + P ALL R +F L R A +A QL+ + Sbjct: 77 HAAGDGVIARIAERIRS-AIGLPCALL-RMGGDEFVVLAAVRDRSAATQLARQLLVEIRL 134 Query: 334 TLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSL---- 389 L +++L R IGI + G++ +E A+ A A +GGN A+ D L Sbjct: 135 PLTVDELLIRPSA-SIGIALEQVGEEPAAWLERADRAMLEAKRRGGNRLALSGDELLTGR 193 Query: 390 --PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEEVSSAEY 447 + R + + + L GG RL+ +P V R+G+V E + R + G +++ A + Sbjct: 194 LGVQLAREELAIESTLHAALENGGLRLHFQPIVGRDGRVEAVEALMRCYAGGHQIAPARF 253 Query: 448 MPMVLQFGLS---EEYDRLQ-ISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLM 503 +P+ + GL E+ L+ L +AI V+ L+ PRF L L+ Sbjct: 254 IPVAEKTGLIIRLGEWSLLEGARCAARLRARGTPTTMAINVSRAQLLSPRFMPALHAALV 313 Query: 504 QCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNV 563 C + I +EL E+ +Q +R +GV +A++ G + +K+L+ Sbjct: 314 -CADVPARLIELELTESLFLDLSPTVQANLRSAREVGVGLAIDDFGTGYSCLANLKDLSA 372 Query: 564 ELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQ 623 LKL + + + +V+S+ V A GV + S+ L + GV Q Sbjct: 373 SKLKLDRSFIAALPGDRRSFAVVRSMTRLGQELGMAVVAEGVENHSQLAALTEAGVDASQ 432 Query: 624 GDFFASSQPLDTNVKKYSQR 643 G A P +K ++R Sbjct: 433 GFHHARPMPEHALLKWMARR 452 >UniRef50_C0N6D3 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6D3_9GAMM Length = 805 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 112/496 (22%), Positives = 209/496 (42%), Gaps = 42/496 (8%) Query: 171 RATRILNGE----RGSNVLGTIYEW--PPRTSSALDTLLREIQNAREQHSRLDTLIRSYA 224 R+ + NGE R S L I E+ P R T IQ + L + A Sbjct: 306 RSGKEWNGEIQNRRKSGELYWIKEYVAPIRNDEGTITHFVAIQEDITEARVLANKLSYQA 365 Query: 225 AQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFT 284 D TGL NR F+ +L L++D + + + I L F +++DT GH +E Sbjct: 366 THDNLTGLINRTEFERRLIELVQDARQHDSVHALCFIDLDQFKVINDTCGHIAGDE---- 421 Query: 285 LTNLLSTFMMRYPGAL-----LARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLP--- 336 LL R G + LAR +FA L+ H ++E +A ++ + ++ Sbjct: 422 ---LLRQLGQRLIGQVRKSDTLARLGGDEFAILMRHCDPGQSEKVATEVREVIELFQFVW 478 Query: 337 NNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIY--DDSLPEKGR 394 ++++ I + R D +V++ A++A A G N IY DD + + Sbjct: 479 DSRVFTIGASIGVS-SIHRHTTDMTEVLKQADTACYAAKNAGRNRVYIYQDDDKHLVEQQ 537 Query: 395 GNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNEEVSS-AEYMPMVL 452 G W I+ L+ L+ +P + + G+ E++ R+ + ++S + ++P Sbjct: 538 GEFHWVNEIKLALTENRFELFVQPITSAKSGKAEIYEVLLRLRNKQGDLSPPSAFLPSAE 597 Query: 453 QFGLSEEYDRLQISRL----------IPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTL 502 ++ LS++ DR + + +P LR +AI ++ SL + + D L Sbjct: 598 RYNLSDKVDRWVLEKTFDWLEKHINQVPDLR-----KIAINLSGASLGNDEMLKLISD-L 651 Query: 503 MQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELN 562 + + +I E+ E ++ I ++ LG +++ G L S ++K L Sbjct: 652 FEKARFSASKIKFEITETAAISNLREATRFISELSKLGCEFSLDDFGSGLSSFGYLKHLP 711 Query: 563 VELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGG 622 V+ +K+ V+++ + +V+S+ + + A V + WQ L G+ G Sbjct: 712 VKSIKIDGMFVKDMAHDPLDFEMVKSINDIGHVMGLKTIAEFVENEDVWQKLQSIGIDYG 771 Query: 623 QGDFFASSQPLDTNVK 638 QG P+D+ +K Sbjct: 772 QGYHLGRPVPIDSILK 787 >UniRef50_C5EJC7 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJC7_9FIRM Length = 855 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 91/417 (21%), Positives = 175/417 (41%), Gaps = 13/417 (3%) Query: 227 DVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLT 286 D TGL N+ F+ + L D +V T GI M++ L F ++D + S +E Sbjct: 432 DHMTGLYNKYEFEGDIKKYLVDHTEVDTIGI-MILDLDSFKNINDLYDRSFGDEVLRITA 490 Query: 287 NLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDM 346 +S+ M A L R +F L +E I ++ + Sbjct: 491 QKVSS--MLPANAKLYRLDGDEFGVLCLGCGEEEGWDIFAKIQQVFHKQQEYSGRKYYCT 548 Query: 347 IHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQ 405 I G + + G + ++++ A + ++ L G N ++ + ++ + L+ + Sbjct: 549 ISAGYTTYPKDGDNYLELLKCANYSLEHSKLMGKNRMTVFSKDILDRRERRLELVELLRE 608 Query: 406 MLSRG--GPRLYQKPAV-TREGQVHHRELMCRIFDGNE-EVSSAEYMPMVLQFGLSEEYD 461 + RG G ++ +P V TR G + E + R ++S E++P++ Q G+ Sbjct: 609 SIDRGFAGFSIHYQPQVDTRTGSLQGAEALARWHCSKYGDISPGEFIPLLEQSGMIINLG 668 Query: 462 RLQISRLIPLLRYW----PEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIEL 517 R R W P+ ++I ++ L ++ DTL + + +++EL Sbjct: 669 RWIFCHAAAQCREWCRYMPDFQMSINLSYVQLAEDDIIPYMEDTLKELDLLP-SHVVMEL 727 Query: 518 AEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIE 577 E + ++ + A G+RVA++ G+ S +K + V+++K+ G V+ I Sbjct: 728 TETYLATADGETLKMLNDMKATGIRVAMDDFGVGYSSLFSLKTIPVDIVKIDRGFVKGIT 787 Query: 578 KRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLD 634 N ++S+ E C QV GV S E+Q + + G+ QG +F + D Sbjct: 788 SDLFNATFIRSITELCHDVGKQVCLEGVESGDEYQAVRELGMEHIQGFYFGRPETPD 844 >UniRef50_B7V348 FimX n=9 Tax=Pseudomonas RepID=B7V348_PSEA8 Length = 691 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 104/442 (23%), Positives = 196/442 (44%), Gaps = 30/442 (6%) Query: 213 HSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDT 272 ++ L+ +R ++QD TGL NR F + + ++ + I L + L Sbjct: 256 NAELEEKLREVSSQDPVTGLYNRSHFLDLMDAAVQQAVTARKPSTLAYIHLNGYPSLQAD 315 Query: 273 WGHSQVEEQFFTLTNLLSTFMMRYPG--ALLARYHRSDFAALLPHRTLKEAESIAGQLIK 330 G S ++ L L+ M G A LAR+ S FAAL +T ++A++ +L+K Sbjct: 316 HGLSGID----LLLGQLAGLMREQFGEEADLARFGDSIFAALFKGKTPEQAQAALQRLLK 371 Query: 331 AVDTLPNNKMLDRDD-----MIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAI 384 V+ N + + + + IG+ + VM A +A +GG+ Sbjct: 372 KVE----NHLFELNGRSAQATLSIGVAGLDEKTAKAQDVMNRAHRCADDAARKGGSQIKQ 427 Query: 385 YDDS---LPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHR-ELMCRIFDG-N 439 Y+ + RG+V +++Q L RL +P ++ G H E++ R+ + Sbjct: 428 YNPAEELAAAAQRGDV--IAILQQALETNSFRLLFQPVISLRGDSHENYEVLLRLLNPQG 485 Query: 440 EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLL----RYWPEENLAIQVTVESLIRPRFQ 495 +EV AE++ + GL+E+ DR I I LL + L + ++ SL P Sbjct: 486 QEVPPAEFLHAAKEAGLAEKIDRWVILNSIKLLAEHRAKGHQTKLFVHLSSASLQDPGLL 545 Query: 496 RWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVST 555 WL ++ + + ++ +++EAD ++ + + + + + L + A++Q G +L Sbjct: 546 PWL-GVALKAARLPPESLVFQISEADATSYLKQAKQLTQGLATLHCQAAISQFGCSLNPF 604 Query: 556 SWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLI 615 + +K L V+ +K+ V+++ + ENQ +++ L+ V S S TL Sbjct: 605 NALKHLTVQFIKIDGSFVQDL-NQVENQEILKGLIAELHEQQKLSIVPFVESASVLATLW 663 Query: 616 QRGVTGGQGDFF-ASSQPLDTN 636 Q G T QG + SQ +D + Sbjct: 664 QAGATYIQGYYLQGPSQAMDYD 685 >UniRef50_C4KCC9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4KCC9_THASP Length = 748 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 94/431 (21%), Positives = 177/431 (41%), Gaps = 15/431 (3%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + R + +I A D T L NR+ F ++L + ++ VM I + F +++D Sbjct: 295 ERKRAEEIISFQAYHDQLTHLPNRVLFKDRLELAIAQAQRRTGALAVMFIDIDRFKLVND 354 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIK 330 T+GH++ + + + LS + R G LAR +F LLP ++AE IA +++ Sbjct: 355 TFGHAEGDLLLRAIASRLSATLRR--GDTLARLGGDEFTVLLPDINQPEDAEVIARKVLD 412 Query: 331 AVDTLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSL 389 A+ T + + +GI + R G E + HA++A G N++ +D L Sbjct: 413 ALATPVRLSQGEFRATVSVGIALFPRDGTTAEDLTRHADAAMYQVKRSGKNAFRFFDPEL 472 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT--REGQVHHRELMCRIFDGNEEVSSAEY 447 + R + + ++RG L+ +P V+ G V L+ G + A + Sbjct: 473 NTRHRDRIALENDLRGAVARGELDLHYQPQVSLATRGIVGLEALLRWNHPGLGAIPPATF 532 Query: 448 MPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEK 507 + + + GL E + L W E + +L FQR D + + Sbjct: 533 IQVAEEVGLISEISNWVLETACAQLARWQAEGVGAPRVSINLSACDFQRG--DVVGRIRA 590 Query: 508 SQRKRII------IELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKEL 561 + + +E+ E + + + +R + G+ VA++ G + ++++ Sbjct: 591 CLDRHGVAPSCLEVEITEGLMMDDTADIAAKVRALREAGISVAIDDFGTGYSALAYLQRF 650 Query: 562 NVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTG 621 V LK+ VR++E N ++ ++ G + A GV + + L G Sbjct: 651 PVSTLKIDRSFVRDLEGPMTNP-IISAITGIARGFDLDLVAEGVENLEQADALRALGCEV 709 Query: 622 GQGDFFASSQP 632 QG FA P Sbjct: 710 MQGYLFARPAP 720 >UniRef50_C0QA93 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QA93_DESAH Length = 629 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 109/460 (23%), Positives = 203/460 (44%), Gaps = 43/460 (9%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 L R+ + E RL+ L A D TGL NR F L T L+ + ++ I Sbjct: 158 LTRKWELNNEIQGRLNQL----AFYDSLTGLPNRTLFIENLTTTLDKAHRYKHKAALLYI 213 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLL------STFMMRYP-GALLARYHRSDFAALLP 314 L +F ++DT GHS ++ + L S + R P G ++AR +F +LP Sbjct: 214 DLDNFKRINDTLGHSIGDDLLKATSKRLLKCLRTSDTVSRSPAGEMVARLGGDEFTVILP 273 Query: 315 HRTLKE-----AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAE 368 T E A IA QL + + L N++++ IGI + + G+D E ++++A+ Sbjct: 274 EVTRAEHAGVVALRIAKQLAEPLH-LGNHQVIVTPS---IGISLFPQDGEDIETLLKNAD 329 Query: 369 SATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVH 427 A + G N ++ Y+ S+ + + Q L RG L+ +P G+V Sbjct: 330 IAMYFSKRMGPNMFSFYEQSMNADALKRMTIENHLRQALGRGEFALHYQPQFDLVTGEVC 389 Query: 428 HRELMCRIFD---GN----EEVSSAEYMPMVLQFG-----LSEEYDRLQISRLIPLLRYW 475 E + R + GN E +S AE M++ G + R + + +PL R Sbjct: 390 GAEALLRWHNWELGNVPPIEFISIAEENGMIVAIGEWVMRTACRQTRTWLDQGLPLQR-- 447 Query: 476 PEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRL 535 +A+ V+V F ++ ++++ + + IE+ E+ + +++ ++ Sbjct: 448 ----IAVNVSVNQFTHTDFLNMVK-SILEETTLDPQYLEIEITESLLVKNVPETTNILHA 502 Query: 536 VNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSG 595 + + +R+A++ G S S +KE+ ++ LK+ V I +Q ++ +++ G Sbjct: 503 LKKMNIRIAIDDFGTGYSSMSRLKEIPIDCLKIDKTFVDGIAIGKRDQSIITAIIAMAEG 562 Query: 596 TSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDT 635 + ++ A GV + + L + QG F S+PL T Sbjct: 563 MNLRLIAEGVETTGQVDFLRVKQCQEVQGYLF--SKPLST 600 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 99/458 (21%), Positives = 201/458 (43%), Gaps = 54/458 (11%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 ++R+I N +E ++++ L A D TGL NR F + QL ++ + +K V+ + Sbjct: 360 IVRDITNKKEYEAKINYL----AFHDSLTGLPNRRFVEQQLDQVIMEAQKTDQQVYVLFL 415 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRY---PGALLARYHRSDFAALLPHRTL 318 L F +++D+ GH F L ++ +R + R +F +L T Sbjct: 416 DLDHFKLVNDSLGHD-----FGDLLLQEASLRLRECVGKKGTVYRLGGDEFMVILTDVTE 470 Query: 319 KEAESIAGQLIKAVDTLPNNKMLDRDDMIH---------IGICAW-RSGQDTEQVMEHAE 368 +E S+A ++ N+ +++ IH IGI + GQD +M +A+ Sbjct: 471 REVSSMANEI---------NETIEQAFFIHGHELYITTSIGISRYPEDGQDRSVLMRNAD 521 Query: 369 SATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVH 427 +A A +G NS+ +Y +L + + + + + L+R L+ +P V+ + G + Sbjct: 522 AAMYAAKDKGKNSFHLYVPNLEQAVNDKMNIQNELNRALARQEFLLHYQPQVSAKSGAIV 581 Query: 428 HRELMCR-------IFDGNEEVSSAEYMPMVLQFG------LSEEYDRLQISRLIPLLRY 474 E + R + ++ +S AE +++ G ++ + Q L PL Sbjct: 582 GVEALIRWDHPERGLLLPDQFISVAEETGLIVPIGEWVLRTACKQNKQWQDQGLKPL--- 638 Query: 475 WPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIR 534 +A+ ++ ++ F + + + L Q + + + +E+ E+ + + R ++ Sbjct: 639 ----RVAVNLSARQFLKQDFTQMIAEILHQTRLAP-EYLELEITESSMID-VHRATQALK 692 Query: 535 LVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACS 594 + LGV VA++ G S ++KE + LK+ VR++ ++ NQ +V +++ Sbjct: 693 ELKQLGVHVAIDDFGTGYSSLYYLKEFPLNRLKIDRSFVRDMIEQPSNQAIVSTIISMAH 752 Query: 595 GTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQP 632 V A GV ++ E L + QG F+ P Sbjct: 753 HLQMHVIAEGVETKEELAFLQEHLCEEVQGYLFSRPLP 790 >UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASD1_RUBXD Length = 1101 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 100/437 (22%), Positives = 186/437 (42%), Gaps = 27/437 (6%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + L+ + A D TGL NR F ++L L + G V+ I L +F ++D Sbjct: 645 EQKNLEARLVHLAFHDPLTGLPNRALFMDRLEHALARAGRSGDVLAVLFIDLDNFKFVND 704 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIK 330 + GH + + LS PG +AR +F LL EA +AG++ + Sbjct: 705 SLGHEAGDRLLALVARRLSGATR--PGDTVARLGGDEFTVLLEGIADGGEAARVAGRVAE 762 Query: 331 AVDTLPNNKMLDRDDMIH--IGICAWRSGQDT-EQVMEHAESATRNAGLQGGNSWAIYDD 387 + ++ R+ + +GI +G + E++M A+ A A +G + + ++D Sbjct: 763 VLRE--PFRVAGRELFVSASVGISVSTAGSGSVEELMRGADLAMYEAKREGKDRYRVFDF 820 Query: 388 SLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCR-------IFDGN 439 + +R + + + R RLY +P V +G+V E + R I + Sbjct: 821 GMSRTAHDRLRLENDLRRAVGRDELRLYYQPVVRLGDGRVVAFEALLRWEHPRRGILLPD 880 Query: 440 EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRF----Q 495 V AE M++ G+ L SR R P +++ ++ L+RP F Sbjct: 881 RFVPLAEETGMIV--GIGRRVLELACSRAAGWRRQEPSLAVSVNISARQLVRPDFVEEVG 938 Query: 496 RWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVST 555 R L+ T ++ E +++E+ E+ ++ + GVR+A++ G S Sbjct: 939 RILQRTGLEPEG-----LVLEVTESAAMDEPGEAARALQRLRERGVRLALDDFGTGYSSL 993 Query: 556 SWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLI 615 S+++ L V LK+ V + + + +LV ++ + A G+ + + + L+ Sbjct: 994 SYLRRLPVCFLKIDRSFVEGLGGDSGSGVLVGGVIALSRELGFEPVAEGIETPGQLERLL 1053 Query: 616 QRGVTGGQGDFFASSQP 632 + G GQG +FAS P Sbjct: 1054 ELGCELGQGYYFASPMP 1070 >UniRef50_A6Q3C0 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q3C0_NITSB Length = 651 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 83/426 (19%), Positives = 188/426 (44%), Gaps = 30/426 (7%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGI---VMMIRLPDFNMLSDTWGHSQVEE 280 A D+ TGL NR F + +L L+ T I ++ I + +F ++DT GH+ +E Sbjct: 229 ANFDLLTGLYNRSFLETKLRDLI-------TKNIPFYLLFIDIDNFKTINDTKGHNVGDE 281 Query: 281 QFFTLTNLLSTFMMRYPGALLARYHRSDFAALL-----PHRTLKEAESIAGQLIKAVDTL 335 N + + + + AR +F ++ P K + I +L + Sbjct: 282 ILKNFANRIRNILRK--DDIFARVGGDEFVIIIQNIDSPKIITKIVDKIFHKLQPPIVLS 339 Query: 336 PNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGR 394 P+ M I IGI + + G+ E ++++A+ A + +G N ++ ++ L +K Sbjct: 340 PSKNMYHIS--ISIGIVEFPKDGKSVEDILKNADIAMYRSKERGKNRFSFFNKQLADKVE 397 Query: 395 GNVRWRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCRIFDGNEEV-SSAEYMPMVL 452 ++ + + +Y +P + R ++ E + R + + + ++P+ Sbjct: 398 SKFILEHELKIAIQKDQFLIYYQPQIDARSNKLIGAEALIRWKHPQKGILTPYHFIPLAE 457 Query: 453 QFGLSEEYDRLQISRLIPLLRYWPE-----ENLAIQVTVESLIRPRFQRWLRDTLMQCEK 507 + L ++ D++ S ++ ++ W E + +AI ++ + F + L+Q Sbjct: 458 ERNLIQQIDQIVFSHVVQDIKEWKERYGFSQKIAINISANHFAQSNFY-YKFTNLIQKNG 516 Query: 508 SQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLK 567 I +E+ E + Q++ +++ ++ G ++++ G S +IK+ V+ +K Sbjct: 517 IDTSSIELEITETSIMQNLETTLRMLKKLHDHGFSISIDDFGTGYSSLFYIKKFPVDKIK 576 Query: 568 LHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFF 627 + + +I K +++++V ++VE G ++ A GV + + L+ QG +F Sbjct: 577 IDKTFIDDIVKNKDDRIIVHAIVEIAKGLGYKIIAEGVEDQEQLDILLDLDCHLIQGYYF 636 Query: 628 ASSQPL 633 +PL Sbjct: 637 --DKPL 640 >UniRef50_A4XFJ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XFJ6_CALS8 Length = 1015 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 82/426 (19%), Positives = 187/426 (43%), Gaps = 15/426 (3%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 I+ A D T L NR F+N+L+ L++ + G G V++I + +F ++D +GH + Sbjct: 577 IKYLAYYDDLTNLPNRKLFENKLSELIKKAAQTGKIGAVILIDIDNFKDINDLYGHEVGD 636 Query: 280 EQFFTLTNLLSTFMMRYP-GALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNN 338 E T++ ++ ++ +R +FA +L L++ + + + N Sbjct: 637 ECLRTISQKIAEYLKGLEVQNYFSRVGGDEFAIIL--NGLEKKDFVIEVCTEIQKIFENE 694 Query: 339 KMLDRDD-----MIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK 392 L++ + I +GI + G+DT++++ + + A A G N + I+ L K Sbjct: 695 IFLEKIERGLYTTISMGISFYPDDGRDTKEILRNVDMALSLAKENGKNDFQIFMPFLLLK 754 Query: 393 GRGNVRWRTLIEQMLSRGGPRLYQKPAVTREG-QVHHRELMCRIFDGNE-EVSSAEYMPM 450 + + + + LY +P V E ++H E + R F ++ VS E++P+ Sbjct: 755 NLNKIEIEKNLRKAIENDEFVLYYQPVVNLENMEIHSVEALIRWFLPHKGMVSPLEFIPV 814 Query: 451 VLQFGLSEEYDRLQISRLIPLLRYWPEENLA-IQVTVESLIRPRFQRWLRDT---LMQCE 506 + GL + I + + L+ W + + I + + R ++ +T L++ Sbjct: 815 AEESGLIVRIGEMVIEKALKDLKDWERKGINDIHIAINLSARQFKTKYFENTVAKLLEKY 874 Query: 507 KSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELL 566 ++ E+ E ++ ++ + +G++ ++ G S ++++L + + Sbjct: 875 SVDPVKVSFEITETGAVENFDVSLKILGFLCQMGIKFLIDDFGTGYSSLIYLRKLPISGV 934 Query: 567 KLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDF 626 K+ + + E++ +V+ ++ +V A G+ + + + L + G GQG Sbjct: 935 KIDKSFISELMFSKESRAIVEGIILMAHKLGLKVVAEGIENNKQLEILKEIGCDFGQGYL 994 Query: 627 FASSQP 632 F+ P Sbjct: 995 FSKPVP 1000 >UniRef50_Q4KFG2 Sensory box-containing diguanylate cyclase, putative n=9 Tax=Pseudomonas RepID=Q4KFG2_PSEF5 Length = 572 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 97/418 (23%), Positives = 179/418 (42%), Gaps = 14/418 (3%) Query: 225 AQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFT 284 DV TGL NR F + L L+ V M+ L F ++D +GH+ + Sbjct: 129 GHDVLTGLPNRAFLSDLLHQALDFSRAQDIPLAVCMLDLDGFKAVNDGYGHACGDLLLVE 188 Query: 285 LTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPNNKMLDR 343 + L + + ++AR +F +L + R + E + +++ + + + D Sbjct: 189 VAARLRSIIRGED--VVARLAGDEFVLILRYVRDMLELRAALQRVLATISQPYSIQGKDI 246 Query: 344 DDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTL 402 + IG+ + + D + ++ HA+ A A G N + ++D + V ++T+ Sbjct: 247 NVFASIGVTLYPTDNHDADTLLRHADQAMYVAKQSGRNRFHLFD--VLRDREVMVTYQTV 304 Query: 403 --IEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNEEVSSA-EYMPMVLQFGLSE 458 + Q L G RLY +P V R G+V E M R + A E++ V + L Sbjct: 305 EQVRQALLAGELRLYFQPKVNMRTGEVVGFEAMLRWQHPQRGMLGAQEFLQQVEETDLIV 364 Query: 459 EYDRLQISRLIPLLRYWPEENL----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRII 514 E + +++ L+ W + L ++ V RP F L+D L + + Sbjct: 365 EIGEWVMDQVMTRLQGWQQAGLGWPVSLNVAARHFQRPDFVERLKDMLDRYPDVLPALLD 424 Query: 515 IELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVR 574 +E+ E+ +I R+ + GV+ ++ G S S++K L + +K+ VR Sbjct: 425 LEIVESVAIDNIQRVSDCLDACQGFGVQFSLGDFGTGHSSLSYLKRLRTQTIKIDRLFVR 484 Query: 575 NIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQP 632 ++ ++Q L+Q+LV +V A G+ S + + L+ G QGDF A P Sbjct: 485 DMLHDADDQALIQALVGLAQAFGRRVVAEGLESLAHGERLMALGCDVAQGDFIAPPMP 542 >UniRef50_C6P569 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P569_9PROT Length = 751 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 94/433 (21%), Positives = 180/433 (41%), Gaps = 19/433 (4%) Query: 211 EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLS 270 +QH R I Y D TG+ NR+ ++L L ++ GT V + L F +++ Sbjct: 310 KQHERQLEHIAHY---DALTGIPNRVLLADRLQQALAHSKREGTILAVCYLDLDGFKLVN 366 Query: 271 DTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIK 330 DT GH ++ +T + + +AR +FA LL L E + L + Sbjct: 367 DTMGHEAGDKVLIEVTQRIKKSIR--GDDTVARLGGDEFAVLL--LGLHAPEECSASLNR 422 Query: 331 AVDTLP-----NNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIY 385 ++ + N++ + I + I D + ++ HA+ A A G N + +Y Sbjct: 423 LLEEISQPIEIKNRLFEVSASIGVSIYP-GDDHDADTLLRHADQAMYTAKQSGKNRYYLY 481 Query: 386 DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNEEV-S 443 D ++ R + + + L R LY +P V R Q+ E + R + + Sbjct: 482 DTENDQRARSHHEFLRRLALALGRNEFELYYQPKVDMRTLQLVGAEALIRWHHPERGLLA 541 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL----AIQVTVESLIRPRFQRWLR 499 +++ + L E ++ + L W E L +I ++V L F L+ Sbjct: 542 PGDFLHAIEGTTLEVELGDWVVATALAQLEAWHEAGLPMELSINISVRHLQANDFAWKLK 601 Query: 500 DTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIK 559 +++ + + +E+ E + I R+ I +G+ A++ G S S++ Sbjct: 602 RKMLRYSHLPKGCLQVEVLETAALEDIPRVSDTIERCRKIGISFALDDFGTGYSSLSYLG 661 Query: 560 ELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGV 619 L V+ LK+ +R++ K ++ +VQ ++ + ++ A GV S ++ L++ G Sbjct: 662 RLPVDALKIDQSFIRDMLKDKGDRAIVQGVIALAKVFNRKIVAEGVESEELFRDLVEMGC 721 Query: 620 TGGQGDFFASSQP 632 GQG A P Sbjct: 722 EYGQGYGIARPMP 734 >UniRef50_C0N8Q5 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N8Q5_9GAMM Length = 727 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 96/424 (22%), Positives = 187/424 (44%), Gaps = 22/424 (5%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A D T L NR F + L + + ++ + L F ++DT GHS +E Sbjct: 282 AEHDPLTDLCNRRKFIEEFEKSLRTAIRYKHNNALLYLDLDQFKDINDTSGHSAGDELLK 341 Query: 284 TLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDR 343 + L + R+ L+AR +FA L+P E A L K + L+ Sbjct: 342 EVAKTLKR-VTRFTD-LVARLGGDEFAVLMPETD----EVGAVVLTKKIQAELQKIQLEY 395 Query: 344 DDMIH-----IGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIY--DDSLPEKGRG 395 ++ H IGI + ++M ++ A A G N++ I+ DD E+ Sbjct: 396 GNVKHKISSSIGIVNYPVHDASIHELMGFSDLAMYKAKSAGKNTYHIFSADDQTREQLET 455 Query: 396 NVRWRTLIEQMLSRGGPRLYQKPAVTREGQV-HHRELMCRIFD-GNEEVS-SAEYMPMVL 452 V W+ IE L L+ +P + E V H E++ R+ + G+ ++ +++ + Sbjct: 456 RVFWKHKIEDALENNLFVLHYQPILNIENNVIQHYEVLIRMREPGSGQIRMPGKFIEIAE 515 Query: 453 QFGLSEEYDRLQISRLIPLLRYWPEENL----AIQVTVESLIRPRFQRWLRDTLMQCEKS 508 Q GL + D I + I L ++ L AI ++ + P +L+ L + E Sbjct: 516 QVGLIQSIDHFVIQQGIKHLSRLQKQGLKVKFAINLSGSVVDAPVLLPFLKRLLKKYELD 575 Query: 509 QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKL 568 +I E+ E ++ + + ++ V ALG + +++ G+ S +++++L ++++K+ Sbjct: 576 PSG-LIFEVTETAAVSNLQQAKLMMTAVKALGCQFSLDDFGVGFASFNYMRQLPIDIIKI 634 Query: 569 HPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFA 628 +++++K ++QL V++L++ G + A V ++ L Q GV QG Sbjct: 635 DGIFIKDLDKNADDQLFVKALIDVAKGLGKKTIAEFVENKDILTLLRQYGVDYAQGYHIG 694 Query: 629 SSQP 632 +P Sbjct: 695 RPEP 698 >UniRef50_B9ZS13 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZS13_9GAMM Length = 866 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 100/442 (22%), Positives = 184/442 (41%), Gaps = 26/442 (5%) Query: 197 SALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHG 256 S L TLL + + + + L YA +D T L N+ F ++ E G Sbjct: 416 SILSTLLNLVGSVKAIYKYTQDL-EHYATRDPLTNLYNQRVFWELFNYEIKRAEGHGYPF 474 Query: 257 IVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGAL-----LARYHRSDFAA 311 VM++ L +F ++D +GH+ + L + GA+ LARY +FA Sbjct: 475 AVMVVDLDNFKTINDRYGHAFGD-------RFLQAYSETIQGAIRNEDILARYGGDEFAL 527 Query: 312 LLPHRTLKEAESIAGQLIKAVD--TLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAE 368 +LP + A +A + +A D +LP IGI A+ R G+DT + A+ Sbjct: 528 ILPETDQQSAWQLAAHMAEATDGLSLPAPDGSRVRATTCIGIAAYPRHGKDTRDLFLVAD 587 Query: 369 SATRNAGLQGGNSWAIYDDS-----LPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE 423 + A +G N+ + D E G + ++E + R +Q T Sbjct: 588 NMMYKAKREGKNAVCVPSDEEVAAVFREAGETGI---MIMEALEDRRIVPYFQPIMDTTT 644 Query: 424 GQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISR-LIPLLRYWPEENLAI 482 G+ H EL+ RI G E + + +++ + G+ + D + I + I + R L I Sbjct: 645 GEAHIHELLMRIRVGGELIPAGQFVEVAETMGVMHQLDYVLIEQAFIEVSRSGYSGLLFI 704 Query: 483 QVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVR 542 ++ +LI F +R L + +++ E+ E D ++++ L+ + + G + Sbjct: 705 NLSPRALIIGEFIGKVRQ-LAHDHGIEPAKVVFEITERDTVKNMAVLEQFVLDLKQQGFQ 763 Query: 543 VAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYA 602 AV+ G S ++K ++ +K+ VRN+ +Q V+S+ + + A Sbjct: 764 FAVDDFGSGFSSFHYLKRFPIDFVKIEGDFVRNMVHDARDQAFVRSIAALARDLNVRTIA 823 Query: 603 TGVRSRSEWQTLIQRGVTGGQG 624 V + + G+ QG Sbjct: 824 EFVEDAEILEAVRSIGIHYAQG 845 >UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZY7_SULD5 Length = 586 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 104/436 (23%), Positives = 184/436 (42%), Gaps = 29/436 (6%) Query: 217 DTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHS 276 ++ I + A D T L NR +++A L ++ G ++MI L +F L+DT GH Sbjct: 150 ESTIHTLAFFDPLTHLANRQLLHDRMAQALAKSQRHHKVGALLMIDLDNFKALNDTKGHH 209 Query: 277 QVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL---PHRTLKEAESIAGQLIKAVD 333 +E + + T + G LAR +F LL H K A+ A + V Sbjct: 210 IGDELLIQVAQRIQTIVRE--GDTLARISGDEFVVLLEGLAHEESKAAQE-AEKFATRVK 266 Query: 334 TLPNN--KMLDRDDMIH--IGICAWRSGQ--DTEQVMEHAESATRNAGLQGGNSWAIYDD 387 L N ++L + IGI + +GQ E +++ A+ A A +G N YD Sbjct: 267 YLLNEPYELLGYEHTCSSSIGIALF-NGQPKSKETLLKQADIAMYQAKEKGRNRICFYDP 325 Query: 388 SLPEKGRGNVRWRTLIEQ----MLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEE-V 442 + E N+ +T +E LS+ L+ +P V EG++ E + R + + Sbjct: 326 LMQE----NIEHKTTMEHELRMALSKEELILFYQPQVNLEGKIVGVEALLRWNHPQKGLI 381 Query: 443 SSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE------NLAIQVTVESLIRPRFQR 496 ++P+ + GL + R L W ++ +L+I V+ + F Sbjct: 382 PPNTFIPLAEETGLIIPVGSWVLHRACQQLSEWKKDFPHQPLHLSINVSAKQFQEASFYE 441 Query: 497 WLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTS 556 + + + S I +EL E+ + I I + LGV +++ G S S Sbjct: 442 TVANAIA-LSGSDAGSIKLELTESLILDSIHETIAKIEALRLLGVGFSLDDFGTGYSSLS 500 Query: 557 WIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQ 616 ++K L ++ LK+ VR+I + ++V++++E V A GV + ++ L++ Sbjct: 501 YLKRLPLDELKIDQSFVRDIGHDNNDAMIVKTIIEMAHNFDLDVIAEGVEDKEQFNFLME 560 Query: 617 RGVTGGQGDFFASSQP 632 G QG F P Sbjct: 561 NGCGLFQGYLFGKPMP 576 >UniRef50_A0L8L0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8L0_MAGSM Length = 714 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 94/435 (21%), Positives = 195/435 (44%), Gaps = 21/435 (4%) Query: 221 RSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEE 280 R+ + +D TGL NR F ++L +L ++ G V+++ L F ++D+ GH Q+ + Sbjct: 279 RTASHEDALTGLPNRSLFADRLEQVLTHAKRSGEKVAVILLGLDGFRKINDSLGH-QIGD 337 Query: 281 QFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNN-K 339 Q T+ +R G +AR +F + R L +SI L K TL K Sbjct: 338 QILTIMAQRFQTNLR-GGDTVARMGSDEFGFIA--RDLISTQSILSVLGKIKRTLSAPIK 394 Query: 340 MLDRDDMIHIGICAWRSGQD---TEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGN 396 + D + + GI + D T+ ++ +A++A A GGN + + ++ + Sbjct: 395 IADSELVFTAGIGISVTPDDSLETDTLIRYADAALGRAKAGGGNIFTFFTQTMEQNASKR 454 Query: 397 VRWRTLIEQMLSRGGPRLYQKPAVTREG--QVHHRELMCR-IFDGNEEVSSAEYMPMVLQ 453 + + + + + L+ + ++ E ++ E + R I + +S +++P+ + Sbjct: 455 LHLEGRLRKAIEQEELTLFYQAKISCEDSPKISGFEALVRWITPEGDIISPGDFIPIAEE 514 Query: 454 FGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKR- 512 GL I R + + V V + + PR ++++D L+Q + + Sbjct: 515 TGLIIPLGSWVIDRTCRDIAHLQALGFP-PVVVSANLSPR--QFVQDGLLQVVQQALVQH 571 Query: 513 ------IIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELL 566 + +E+ E+ V + + +++ + ALGV +A++ G S +++K L Sbjct: 572 GIDPCWLELEITESSVMGSVDQATELLKSLVALGVHIALDDFGTGYSSLAYLKRFPFHTL 631 Query: 567 KLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDF 626 K+ V+ +EK +Q ++Q++V QV A GV + + + Q G QG + Sbjct: 632 KVDRAFVQTVEKDRADQAILQAIVSLARNLELQVVAEGVENEGQRDFITQAGCHSIQGFY 691 Query: 627 FASSQPLDTNVKKYS 641 ++ PL ++K++ Sbjct: 692 YSKPLPLSEVMEKWA 706 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 95/423 (22%), Positives = 178/423 (42%), Gaps = 14/423 (3%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 I+ A D T L NR F LA +E + V+ I L F ++DT GH + Sbjct: 150 IQYLATHDSLTALPNRFMFSKLLAVAIESARRHQRQLAVLFIDLDRFKNINDTLGHDAGD 209 Query: 280 EQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPNN 338 + T+ N T + ++ R +F LLP + +A +A +++ A + Sbjct: 210 QLLITMANRFRTCLRT--SDIVGRLGGDEFVILLPELESHDQAARVAQKILSAAIQPLDV 267 Query: 339 KMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNV 397 + IGIC + +D + +M++A+ A A +G N++ Y L + + Sbjct: 268 HGQECRVTASIGICLYPEDAEDEQALMKNADIAMYRAKEEGKNNYQFYSPDLKVRSLERL 327 Query: 398 RWRTLIEQMLSRGGPRL-YQKPAVTREGQVHHRELMCRIFDGNE--EVSSAEYMPMVLQF 454 + + L R L YQ + G++ E + R + E +S A ++P+ + Sbjct: 328 MLENNLRKALERHEFFLHYQAKRNLKTGKIAGVEALVR-WQHPELGTISPAHFIPLAEET 386 Query: 455 GLSEEYDRLQISRLIPLLRYWPEENL-AIQVTVESLIRPRFQRWLRDTLMQCEKSQ---R 510 GL R + W ++ L I + V R F L + + + Sbjct: 387 GLIVHLGRWVLRAACTQGVIWQQQGLPPICIAVNLSARQFFDDNLINDIANALRESGLAP 446 Query: 511 KRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHP 570 + + +E+ E + Q R ++ + ALGVR+A++ G+ S + IK ++ LK+ Sbjct: 447 ELLEMEITEGMIMQDAERAIRILTGIKALGVRLAIDDFGVGYSSLAHIKRFPIDTLKVDS 506 Query: 571 GLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASS 630 +R+I E++ + ++++ S V A GV ++ + L QG +F S Sbjct: 507 SFIRDIPANREDRAITEAIIAMGKTLSLTVIAEGVETQEQENFLRDSACDQTQGYYF--S 564 Query: 631 QPL 633 +P+ Sbjct: 565 KPV 567 >UniRef50_B1Y3Y1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y3Y1_LEPCP Length = 730 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 98/452 (21%), Positives = 192/452 (42%), Gaps = 18/452 (3%) Query: 192 PPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEK 251 PP S + L + + + R+ +R + I A +D TGL NR F+++L L + Sbjct: 249 PPAASDEVGVLTQAMDDMRQNLARREARIAELAYRDDLTGLANRTLFNDRLDQALASARR 308 Query: 252 VGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAA 311 G V+++ L F ++D GH+ ++ + L +MR +AR +FA Sbjct: 309 QGNALSVLVLDLDRFKQVNDVLGHTLGDQVLKEVGERLRNALMRTTDT-VARLAGDEFAV 367 Query: 312 LLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGI-CAWRSGQDTEQVMEHAESA 370 LLP + A ++ +L+ +++ + D IGI CA +G Q+M A+ A Sbjct: 368 LLPTQDHAAATALGRRLLSVLESPVPVQGQRVDVSASIGIACADDAGLSAAQLMARADIA 427 Query: 371 TRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPR-----LYQKPAVTREGQ 425 A QG +++ ++ + TL+ L R + LYQ +G Sbjct: 428 MHEAK-QGNRGLLVFEAAMERHVEHGL---TLLSD-LRRAADQHEFFLLYQPKLRLSDGH 482 Query: 426 VHHRELMCRIFDGNEEVSSAE-YMPMVLQFGLSEEYDRLQISRLIPLLRYWP----EENL 480 E++ R + + ++P Q G + + + L W + +L Sbjct: 483 CDAAEVLIRWRHPQRGIVPPDRFIPFAEQTGAIKAITLWVLQHALNQLASWQQLGWQLSL 542 Query: 481 AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALG 540 I V+ L +P F L D ++ + +E+ E+ + ++ ++ +N +G Sbjct: 543 NINVSTRDLGQPDFP-ALVDNALRRAGVAAASLCLEVTESAIMDDPAQALRCLQALNEMG 601 Query: 541 VRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQV 600 VR++++ G S +++K+L V+ LK+ V +++ + +V+S ++ V Sbjct: 602 VRLSIDDFGTGYSSLAYLKKLPVQELKIDRSFVSGLDRDEADVTIVRSTIDLAHHMGLAV 661 Query: 601 YATGVRSRSEWQTLIQRGVTGGQGDFFASSQP 632 A G+ + + Q L G QG ++ P Sbjct: 662 VAEGIETEAVSQRLRSFGCDQAQGYLYSRPLP 693 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 92/453 (20%), Positives = 199/453 (43%), Gaps = 19/453 (4%) Query: 192 PPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEK 251 P R + T I+ + +++ IR A D+ TGL N+ ++ ++ ++ Sbjct: 841 PLRHTDGRVTNYLSIKEDITEQKQVEARIRQLAHFDLLTGLPNQTLLKDRAGFAMQMAQR 900 Query: 252 VGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAA 311 H V+ + + F ++DT GH +E L + ++R L +R+ +F Sbjct: 901 SAHHLAVLFLDIDHFKNINDTLGHRIGDELLVHLAKRMK-LLLRDEDTL-SRFGGDEFIL 958 Query: 312 LLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMI---HIGICAWRS-GQDTEQVMEHA 367 +LP A +A +++ +T+ +++ +++ IGI + S G D +++ + A Sbjct: 959 VLPDTDADGAAHVAEKIL---ETVAKTCYIEQHELVVTPSIGIAMYPSDGMDFDKLYQSA 1015 Query: 368 ESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQV 426 + A A G N++ + + + + + Q LSR L+ +P ++ ++G++ Sbjct: 1016 DVAMYRAKQDGRNNFRFFTSEMQARSARRLLLENALRQALSRNQFELHYQPQISMQDGKI 1075 Query: 427 HHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW-----PEENL 480 E + R + +S AE++P+ + GL + + ++ W P + Sbjct: 1076 VGAEALLRWYHPELGSISPAEFIPVAEESGLILSIGEWVLRTAVQQVKRWQDAGHPPVTV 1135 Query: 481 AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALG 540 AI ++ + R + L + + I +EL E+ + V+ ++ G Sbjct: 1136 AINLSAVQFRQARLSELVMQILHEANLAPH-WIELELTESVAMDNPLVAIGVMNDLHGCG 1194 Query: 541 VRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQV 600 +R++++ G S S++++ V LK+ VR++ E++ +V +++ S Q Sbjct: 1195 IRMSIDDFGTGYSSLSYLRKFKVNKLKIDQSFVRDLADDIESRAIVTAIITLASSMGFQT 1254 Query: 601 YATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 A GV + + L +G QG +F S+PL Sbjct: 1255 IAEGVETAGQLAFLRLQGCNEVQGYYF--SRPL 1285 >UniRef50_Q0F3I9 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3I9_9PROT Length = 1123 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 114/478 (23%), Positives = 207/478 (43%), Gaps = 46/478 (9%) Query: 181 GSNVLGTIYEWPPRTSS--ALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFF 238 GS G + P S A+ L+++I + +E +L L SY+ D TGL NR + Sbjct: 655 GSTFWGELRGVPVEYESQPAVQLLIQDISSRKEAQEQLRLL--SYS--DELTGLPNRRLY 710 Query: 239 DNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTN-LLSTFMMRYP 297 +++ + ++ + L F +++DT GH+ + T+ N LL T + Sbjct: 711 SDRVEQACSMARRRKRPISLLFLDLDRFKLINDTRGHACGDMVLKTVANRLLQTLRVSDT 770 Query: 298 GALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMI---HIGICAW 354 A R +FA LLP +A +AG+LI A++ ++ ++I IG+ ++ Sbjct: 771 AA---RMGGDEFAVLLPETEPDKALRVAGKLIAALN---QPILIGNQELIIGASIGLASF 824 Query: 355 RS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPR 413 + G+D E +++HA+SA A N I+ S + R + L+ G + Sbjct: 825 PADGEDGETLLKHADSAMYYAK---QNRLNIHCFSSVMEAVAQRRMQLEDSLRLAAGSGQ 881 Query: 414 L---YQKPAVTREGQV---------HHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYD 461 L YQ EG + HH EL GN +S E++P+ + GL Sbjct: 882 LSLHYQSQHSLAEGTITGMESLMRWHHPEL------GN--ISPGEFIPLAEETGLIRSIT 933 Query: 462 RLQISRLIPLLRYWPE-----ENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIE 516 I+ W E E ++I ++ L++ + TL++ ++ + I IE Sbjct: 934 AWAITEASRQALVWEEAGIRPERISINISAAELMQQNLASEIL-TLIRGSGAKPEWIEIE 992 Query: 517 LAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNI 576 + E ++R + GV +A++ G S +++K+L + LK+ +RN+ Sbjct: 993 ITETAAMNQPETGIGIMRELVEGGVSIAIDDFGTGYSSLAYLKQLPADHLKIDIAFIRNL 1052 Query: 577 EKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLD 634 E+ ++V++++ V A GV ++++ L Q G G QG P D Sbjct: 1053 PDDAEDAVIVRTIIAMAHALGMTVVAEGVETQAQLDFLRQEGCDGIQGYLLGKPLPAD 1110 >UniRef50_B7KGZ9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGZ9_CYAP7 Length = 897 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 94/433 (21%), Positives = 191/433 (44%), Gaps = 29/433 (6%) Query: 220 IRSYAAQDVKTGLNNR-LFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQV 278 +R A D TGL NR L D + ++ + TH V+ + + F +L+D+ GH Sbjct: 461 LRHDALHDSLTGLPNRALLMDRLTQAINREKGRFYTHFAVLFLDVDRFKLLNDSLGHLVG 520 Query: 279 EEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAV----DT 334 ++ + N L +R +AR +F LL E S GQ IK + Sbjct: 521 DQLLISFANCLKK--IRRFTDTIARLGGDEFVILL------EDLSEVGQAIKVAQRINEI 572 Query: 335 LPNNKMLDRDDMI---HIGICAWRSG-QDTEQVMEHAESATRNAGLQGGNSWAIYDDSLP 390 L ++ ++D ++ IGI S + Q++ A++A A G + ++D S+ Sbjct: 573 LSSSFLIDDQEIFITASIGIAFSNSSYEHPSQILRDADTAMYYAKNNGRGKYQVFDSSMH 632 Query: 391 EKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNE-EVSSAEYM 448 ++ + + + R +Y +P + + G + E + R E +S AE++ Sbjct: 633 IHALKQLQLENDLRRAIERDELVVYYQPIICLKNGTLIGVEALVRWQHPQEGMISPAEFI 692 Query: 449 PMVLQFGLSEEYDRLQISRLIPLLRYWPEE-------NLAIQVTVESLIRPRFQRWLRDT 501 P+ + GL E D+ ++ +R+W E+ L++ ++ +P + + + Sbjct: 693 PIAEETGLIIELDQWVLNTACQQMRFWQEKYSDFKSITLSVNLSGRQFSQPDLIKNIDNI 752 Query: 502 LMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKEL 561 L Q K +++ + +E+ E + ++ + ++ + V V ++ G S ++ Sbjct: 753 LTQ-NKLEKQYLKLEITETVLIENPNSAAEMLEQLIERKVTVCLDDFGTGYSSLGYLHRF 811 Query: 562 NVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTG 621 +++LK+ V NIE T N ++++++ +V A G+ + + + L G Sbjct: 812 PLDVLKIDRSFVSNIETNTSNSTIIRTIITLARELEIEVIAEGIETEQQREFLQSLGCHY 871 Query: 622 GQGDFFASSQPLD 634 GQG +F S P+D Sbjct: 872 GQGYWF--SPPVD 882 >UniRef50_A3QBK2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella loihica PV-4 RepID=A3QBK2_SHELP Length = 816 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 81/418 (19%), Positives = 180/418 (43%), Gaps = 11/418 (2%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A D T L NR+ +++ + +M+I + F L+D+ GHS ++ Sbjct: 393 ANHDQLTDLPNRILLHDRINHACAVADSYDKSVALMLIDIDHFKYLNDSLGHSYGDQVIK 452 Query: 284 TLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL-KEAESIAGQLIKAVDTLPNNKMLD 342 + L + + P A L R +F LLP T + +SIA ++++++T + Sbjct: 453 QVAKRLQSLI--DPNATLGRIGGDEFVLLLPSLTATSQVDSIATDIVRSLNTPFRIDGQE 510 Query: 343 RDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRT 401 + +GI + S E++M H ++A A G N + + + L ++ T Sbjct: 511 YTLSVSVGISIYPSDALRAEELMTHVDAAMYRAKDLGRNRFCYFSEDLEQELTKRHELVT 570 Query: 402 LIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNEE-VSSAEYMPMVLQFGLSEE 459 L+ + +Y +P V + ++ E + R++D + + +S +++P+ + GL + Sbjct: 571 LLRTAIDTEAIEVYYQPKVDLKTKEIIGAEALARLYDPSGKLISPLDFIPLAEETGLIHQ 630 Query: 460 YDRLQISRLIPLLRYWPEE----NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIII 515 + + + + W + +A+ + + P F + L + + + Sbjct: 631 LGEIILKQSCMAAKAWQKRGRPLQIAVNIAAKQFTNPEFCDSVAKVL-ELTGLDSSFLEL 689 Query: 516 ELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRN 575 E+ E+ + V+ +++LG+ +A++ G S S++K V LK+ V++ Sbjct: 690 EVTESSLMYDFDEALNVLNTLSSLGLSIAIDDFGTGYSSLSYLKFFPVNTLKIDQSFVKD 749 Query: 576 IEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 + ++ +V++++ ++ A G+ + Q L+ GQG F+ PL Sbjct: 750 MLGDEQSLDIVKAVIHLAKSLKLKLIAEGIEDAEQLQKLVALECEQGQGYMFSKPLPL 807 >UniRef50_Q31DY5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31DY5_THICR Length = 671 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 94/462 (20%), Positives = 209/462 (45%), Gaps = 38/462 (8%) Query: 197 SALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHG 256 S + ++ +++ EQ +R + D TGL NR + + + L+D+ H Sbjct: 218 SGYNEMIHKVEATTEQ-------MRYLSEHDDLTGLYNRYYIELLIQKALQDE--TAQHH 268 Query: 257 IVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGAL-LARYHRSDFAALLPH 315 +++ I L F +++D GHS +E + + + P ++ +AR DF LLP+ Sbjct: 269 VLLNIDLDQFKLINDAAGHSAGDELLKMVAHSCQDML---PDSVSMARIGGDDFYILLPN 325 Query: 316 RTLKEAESIAGQLIKAV-DTLPNNKMLDRDDMIHIGICAWRSGQDT-EQVMEHAESATRN 373 + K ++IA L++ + D + + IG+ A++ + T E++++ A+SA + Sbjct: 326 HSEKIGKAIAETLLEHLSDFRFSWEGQAYSVSASIGMVAFKPFEYTLEELVKAADSAFYS 385 Query: 374 AGLQGGNSWAIY--DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE------GQ 425 A G N I+ +D + + V+ + I++ L++G K E Sbjct: 386 AKSAGRNKLHIFHSEDEESQYYKHEVQIASYIKEALAQGASPTPSKNTAYFELFAQGITP 445 Query: 426 VHHR-------ELMCRIFD--GNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP 476 + H E++ R+ D GN ++ ++P ++ + + D +++ + ++ P Sbjct: 446 LQHNNRDEVSYEILIRLRDVKGNL-IAPDAFLPTAERYQMMADIDGFVLTQYLNRVQSLP 504 Query: 477 EE-----NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQP 531 I + SL FQ L+ + + +++ +E+ E + ++ P Sbjct: 505 THLTKLHKAHINLAGSSLNNADFQARLKQLVSEHPHFPWRKLELEITETSAVGNFNQAMP 564 Query: 532 VIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVE 591 I+ ALG+ +A++ G + S ++K L +++K+ V+++ ++ +++ + E Sbjct: 565 FIQYCQALGIGLALDDFGTGMSSFEYLKSLPFDVIKIDGSFVKDMHSDPSDKAVIRYIQE 624 Query: 592 ACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 + + + A V ++ + L + G+T GQG F +PL Sbjct: 625 ISALRNQETVAEYVETQEDVDVLTEIGITYGQGYFLGRPKPL 666 >UniRef50_Q2SQ18 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQ18_HAHCH Length = 721 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 96/450 (21%), Positives = 193/450 (42%), Gaps = 22/450 (4%) Query: 197 SALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHG 256 SA + L E+ + +E L +I D TGL NR FF LA + ++ + Sbjct: 264 SANEALQSEVASRQEVEQTLSHVI----THDALTGLPNRSFFQEDLAQAILRAQRANKYL 319 Query: 257 IVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH- 315 VM++ L F ++DT HS ++ LT +T + +AR +F LL + Sbjct: 320 AVMLVDLDQFKKINDTLTHSAGDQLVVALTKRFNTLLENEIS--IARAGGDEFMMLLENP 377 Query: 316 RTLKEAESIAGQLIKAVD---TLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESAT 371 ++ E +IA +++ + TL + ++ IGI + G E ++ +A++A Sbjct: 378 ESVDEVIAIANRIMACMKQPFTLNDEEVF---ITCSIGIAVYPEGGVSAEDLIRNADAAL 434 Query: 372 RNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHH-RE 430 A G N + Y + + + + + + R L +P V + + + E Sbjct: 435 YRAKAAGRNGYHFYTTGMHAEALKRLELDRWLREAIERNELSLAFQPKVNLKTRDYTGAE 494 Query: 431 LMCRIFDGNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW-----PEENLAIQV 484 ++ R + + +S AE++P+ + GL +E + R L W LAI + Sbjct: 495 VLLRWYRPEQGFISPAEFIPLAEETGLIKELGMWVVRRACQQLSEWRGTPLSHIRLAINL 554 Query: 485 TVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVA 544 + L + + L + + R+ + EL E Q+I + + +G R++ Sbjct: 555 SAIQLEDKELVHKIDNLLREFDVPPRQ-LEFELTEEVFIQNIESNMAHLNELIKMGFRLS 613 Query: 545 VNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATG 604 ++ G+ S +++K + +K+ V +E ++++++ +++ + V A G Sbjct: 614 IDDFGVGYSSLAYLKHFPISCIKIDRSFVSQLETNADDRVIINAVIAMAHNLNLSVVAEG 673 Query: 605 VRSRSEWQTLIQRGVTGGQGDFFASSQPLD 634 V + ++ L ++G QG FA P D Sbjct: 674 VETEAQAAYLQKQGCDEAQGYLFAKPLPPD 703 >UniRef50_C4L8V0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L8V0_TOLAT Length = 528 Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 111/505 (21%), Positives = 220/505 (43%), Gaps = 44/505 (8%) Query: 147 IIVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSA---LDTLL 203 I+++ LA+ W ++L +A +++ E +N + +P TS+ D L Sbjct: 48 ILILSLLALHW------NHQVLLKKAEKLIASELTANQPSSGV-FPFLTSAVQQTKDALN 100 Query: 204 REIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRL 263 +++ ++ +S L+ + QD TGL NR F L L+ +E + + +IR Sbjct: 101 KDVDRIKKINSELEHRV----LQDNLTGLQNRSAFRKDLTEFLQ-RETLSDQACLCLIRS 155 Query: 264 PDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAES 323 + ++ G ++ + ++ + R+ + R SD+A LLP+ + S Sbjct: 156 TELATINHQRGRIAGDQYLLAIAEIVQSVSQRFSTHYVYRLSGSDYAILLPNAS----AS 211 Query: 324 IAGQLIKAVDTLPNNKMLD--RDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNS 381 IA L K + L +N L + + + GI GQ EQ + A+ A A N Sbjct: 212 IAPILGKELKQLFDNLQLQILAESIAYSGITFLHPGQPPEQPLSRADLALAKAQTNVVNG 271 Query: 382 WAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQV---------HHRELM 432 W + +++ + +G W+ I+ +L G ++ GQ ++ +++ Sbjct: 272 WYLQEENAGDAFQGESHWQHTIQSILESHG--------ISFSGQAIQPLNMAINNYIQII 323 Query: 433 CRIFDGNEEVSSAEYM-PMVLQFGLSEEYDRLQISRLIPLLRYWPEENLA---IQVTVES 488 R N++ +E + M ++ G + + L I L+ + PE N+A + ++ + Sbjct: 324 PRFIGPNQQSLPSETVYAMAMRHGTMGKLEELVIESLLQQHKLHPE-NVARWGLNLSASA 382 Query: 489 LIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQA 548 L F WL L+Q E+ ++ E+ E + H++ + ++ +G R +++ Sbjct: 383 LFSSSFIVWLEQRLLQ-EQDITPNLVFEIDEEILDCHLAASIRMFEMLRRVGCRSCISKF 441 Query: 549 GLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSR 608 G L S +EL + +KL LV IE+ +Q V+ ++E V A GV + Sbjct: 442 GRGLGSFRLYRELRPDYIKLDSYLVETIERDGTSQQFVRMIIEISHRLGCVVIAEGVETT 501 Query: 609 SEWQTLIQRGVTGGQGDFFASSQPL 633 S+ + L + + G QG + P+ Sbjct: 502 SQREALERMYIDGIQGQLVSKIIPI 526 >UniRef50_C7RL13 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RL13_9PROT Length = 821 Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 103/382 (26%), Positives = 163/382 (42%), Gaps = 23/382 (6%) Query: 258 VMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT 317 ++ I L DF +D GH +E + LS M + G L AR +FA L P Sbjct: 414 LLFIDLDDFKHANDVGGHRTGDEILVAVAQTLSDQMRK--GELAARLGGDEFAVLCPGNG 471 Query: 318 LKEAESIAGQLIKAVDTL----PNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRN 373 A +IA +L++AV L + + L I I C ++ + ++ A++A Sbjct: 472 AHAASAIAARLVEAVGGLRFAAADMQTLRIGCSIGIATCP-NDAREEDDLVACADTAMYL 530 Query: 374 AGLQGGNSWAIYDDSLPEKGRGN---VRWRTLIEQMLSRGGPRLYQKPAVTREG--QVHH 428 A G N WA+Y + P + R V W I + L L+ + AV R QV + Sbjct: 531 AKQSGKNGWAVYHND-PLRSRAESARVNWNARINRALQDQRFVLHFQ-AVHRAADLQVTY 588 Query: 429 RELMCRIFDGNEE---VSSAEYMPMVLQFGLSEEYDR---LQISRLIPLLRYWPEENLAI 482 E + R+ D + +S A+++P G + DR L +R L P +A Sbjct: 589 FEALVRMVDETDPSRLISPADFVPHAELSGKVRQIDRWVFLNCAR--KLASTDPSVCIAA 646 Query: 483 QVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVR 542 ++ SL F +L DTL Q E R R+ IE+ E + + +I + LG Sbjct: 647 NLSARSLEDATFPAFLDDTLRQLEVDPR-RLHIEVTETSAISDPAAARRMIDALRGLGCA 705 Query: 543 VAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYA 602 V ++ G S + +K L+VE +K+ +R++ + N+L V S++E A Sbjct: 706 VYLDDFGSGFSSFAHLKLLDVEAIKIDGAFIRDLHGDSTNRLFVASMIEIAHHLKKLAVA 765 Query: 603 TGVRSRSEWQTLIQRGVTGGQG 624 V S L GV QG Sbjct: 766 EHVEDASTLDILRSLGVDLVQG 787 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 90/441 (20%), Positives = 180/441 (40%), Gaps = 31/441 (7%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + R + IR + D TGL NR +F +L L+E + ++++ L F ++D Sbjct: 522 EFKRAEAQIRYLSYHDDLTGLPNRAYFQARLDQLIEAAARDRKQIALVVLDLDRFKTIND 581 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKA 331 + GHS +E + + + G +AR +F +L A +A +I A Sbjct: 582 SLGHSVGDELLCQVAERIQDCTGQ--GDFVARQGGDEFVVILADSDAVRAARVANAMISA 639 Query: 332 V--DTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSL 389 + + + L + I + +G D+E +++ A++A +A G N++ + + Sbjct: 640 IAKPAVAGGRTLIVTPSLGISLYPHDAG-DSESLIKSADAAMYHAKSLGRNTYQFFSAEM 698 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEE-------- 441 + + Q LS G RLY +P + E+ R G E Sbjct: 699 SAVATERLALENALHQALSNGEFRLYYQPQI---------EVCSRRLIGLEALIRWRHPE 749 Query: 442 ---VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPR 493 V ++P+ + G+ R + R W L A+ ++ L + Sbjct: 750 VGWVPPLRFIPLAEETGIIHRIGRWVLEEACRQQREWQAAGLCIVPVAVNLSPLQLQKDD 809 Query: 494 FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLV 553 F + L C + + +EL E V + + R+ ++R + G R +++ G Sbjct: 810 FPEQVEALLSGCRLAP-GLLELELTETAVMRDVGRMSDMLRKLKERGTRFSIDDFGTGYS 868 Query: 554 STSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQT 613 S ++ V+ LK+ +R++ +R ++ + ++++ +V A GV + + + Sbjct: 869 SLGYLNRFPVDKLKIDQSFIRDVTRREDHAAITRAIIALAKQLHLKVVAEGVETAEQLEF 928 Query: 614 LIQRGVTGGQGDFFASSQPLD 634 L + G G QG +F+ P D Sbjct: 929 LERAGCDGAQGFYFSRPVPAD 949 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 97/437 (22%), Positives = 189/437 (43%), Gaps = 17/437 (3%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 Q ++ I+ A D TGL NR +L + + ++ G +G ++ + L DF L+D Sbjct: 469 QRKAAESKIKQLAFYDQLTGLPNRQLLMERLESARLNSQRNGQYGAILYLDLDDFKTLND 528 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH--RTLKEAESIAGQLI 329 T GH ++F TL + +R +AR +F +L L A A L Sbjct: 529 TRGHD-TGDKFLTLVSQRLLDCVRRTDT-VARIGGDEFVIILEQLDSDLDIASKRADLLC 586 Query: 330 -KAVDTLPNNKMLDRDD---MIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAI 384 K +DTL +D + + IG+ + + +++++HA+ A A G N+ Sbjct: 587 RKILDTLSKPYYIDNIEHFSTLSIGVTLFLGETKGIDELLKHADLAMYQAKGAGRNTHRF 646 Query: 385 YDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNE-EVS 443 ++ + K + I L+R LY +P VT +GQ+ E + R + +S Sbjct: 647 FNPEMQAKVLEHAAMANDIRHALTRNEFTLYYQPQVTHDGQLTGAEALIRWQHPKQGTIS 706 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN------LAIQVTVESLIRPRFQRW 497 E++P+ + GL + + +L W LAI ++ + + F + Sbjct: 707 PIEFIPIAEETGLILPLGEWVLDQACQVLAVWQNSPLTDSLVLAINISAKQFHQTGFVQQ 766 Query: 498 LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 + + L Q ++ R+ +EL E+ + + + + + GV +++ G S ++ Sbjct: 767 VLEAL-QRYRANPDRLKLELTESMLHEDLEDTITKMSQLKKYGVSFSLDDFGTGYSSLNY 825 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 +K L ++ LK+ VR++ + + + +++V + V A GV ++ + L Sbjct: 826 LKRLPLDQLKIDKSFVRDLLTNSHDADIARTIVSLAKSMNLAVIAEGVETQEQRLALASY 885 Query: 618 GVTGGQGDFFASSQPLD 634 G QG F+ PL+ Sbjct: 886 GCLDFQGYLFSRPVPLE 902 >UniRef50_C0QSJ8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Persephonella marina EX-H1 RepID=C0QSJ8_PERMH Length = 621 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 84/418 (20%), Positives = 192/418 (45%), Gaps = 23/418 (5%) Query: 219 LIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQV 278 +++ A D TG+ NR + + ++ +++ ++ IVM++ + F ++DT+GH Sbjct: 217 ILKQRAYTDSLTGVFNRNYLE-EITDVIDLKD-----YIVMLVDIDHFKRINDTYGHEIG 270 Query: 279 EEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH--RTLKEAESIAGQLIKAVDTLP 336 + L+ + R ++ RY +F LL + + K++ +A +L+ DT+ Sbjct: 271 DRVLSKFAELIKQNLRR--DDIIIRYGGEEFLVLLKNYRKQKKDSLKVAERLM---DTIE 325 Query: 337 NNKMLDRDDMIHIGI-CAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRG 395 N + + IGI ++ ++ A++A A +G N I+ ++ K Sbjct: 326 NTEFSGIRITVSIGINMDTDKSRNLTDAIKKADTALYKAKREGRNRIEIFTEA---KDDS 382 Query: 396 NVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNEEVSSAEYMPMVLQF 454 ++ L ++++ G + +P V + + + E + RI ++ + A+Y+ + Sbjct: 383 DISLSQL-KEIIENGQVICHYQPVVNLKSKEPIYYEALARIVHKDKILPPAKYIDQIKGT 441 Query: 455 GLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRII 514 L ++ + I + L +P N++I + + + + LM+ + KRI Sbjct: 442 FLYSKFTKNVIEYNLKTLERYPLVNISINLAPTDFL----NESILNILMEIDDIYVKRIK 497 Query: 515 IELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVR 574 +E+ E + L+ I ++ G +A++ G ++ ++ E+ + LK+ +++ Sbjct: 498 LEVIETEDITDYESLKENIEKLSRKGYEIALDDFGRGYINFYYLTEIKSKYLKIDGSVIK 557 Query: 575 NIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQP 632 NI K+ + +V++LV C T+ A V ++ + L++ G GQG +F+ P Sbjct: 558 NIPKKDQYCKIVKNLVNYCKDTNKIAIAEFVENKEIYLKLLELGFEYGQGYYFSKPGP 615 >UniRef50_C6X941 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X941_METSD Length = 738 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 95/441 (21%), Positives = 174/441 (39%), Gaps = 50/441 (11%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 I A D T L NR+ F ++L + ++ +M + L F ++DT GH + Sbjct: 292 ITHQAYHDTLTDLPNRMLFKDRLTVAIHHAKRNKHKLAIMFLDLDRFKWVNDTLGHLYGD 351 Query: 280 EQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNK 339 E + L M LAR +F LL + ++ Q K D L Sbjct: 352 ELLKQVAARLRNCMRE--QDTLARMGGDEFTMLLHELNQPDDATVIAQ--KIFDELKRPF 407 Query: 340 MLDRDDMI---HIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRG 395 MLD ++ IGI + G E +++ A+ A + +G N + YD S+ Sbjct: 408 MLDDREIFISSSIGIAIYPDHGDSIENLIKRADIAMYHVKWRGKNGFQYYDPSMNSMFHK 467 Query: 396 NVRWRTLIEQMLSRGGPRLYQKPAVTREGQV----------HHRELMCRIFDGNEEVSSA 445 + + + + + LY +P + +G HH EL VS Sbjct: 468 KLSLENELRRAIEKRQIVLYYQPKIHLDGHCVIGLEALARWHHPELGL--------VSPL 519 Query: 446 EYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE-----NLAIQVT---------VESLIR 491 E++P+ + GL + + +R W + +LAI ++ V ++ Sbjct: 520 EFIPLAEETGLIHALGEMLLEEACVQMRQWQDAGLNNFSLAINISPQLVEEDAFVSRILT 579 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 P L + L + E ++ L DV IS+L+ + + G+++A++ G Sbjct: 580 PIRHHQLSEDLFEIEITEN------LLMRDVESSISKLKEL----GSHGIKIALDDFGTC 629 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S ++++ + +K+ V +I +EN ++ ++ +G + A GV + + Sbjct: 630 YSSLAYLRRFPIHSVKIDKSFVSDISSTSENASIISAIAGIANGFKLDLIAEGVETIPQM 689 Query: 612 QTLIQRGVTGGQGDFFASSQP 632 TL G T QG F+ P Sbjct: 690 HTLQSLGCTKMQGFLFSKPLP 710 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 85/421 (20%), Positives = 175/421 (41%), Gaps = 16/421 (3%) Query: 226 QDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTL 285 D TGL NR+ D+++ + E+ + V ++ L F +++D+ GHSQ + + Sbjct: 336 HDALTGLANRVLLDDRIQQAIVHAERAQRNTAVFLLDLDRFKVINDSLGHSQGDAVLLAV 395 Query: 286 TNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDD 345 LS + PG L+R +FA ++ H I Q I P + +R+ Sbjct: 396 AERLSACIS--PGDTLSRLGGDEFAIVMTHVNHPADARIMAQKILNAFEQP-FPLGNREL 452 Query: 346 MIHIGICAW---RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTL 402 I I A R G+ +E ++ HA++A A QGGN + + + + + Sbjct: 453 RITTSIGASLYPRDGEQSEDLLRHADAAMYQAKKQGGNGFQFCSEEMDTRAHKALELEGD 512 Query: 403 IEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNEE-VSSAEYMPMVLQFGLSEEY 460 + Q L G L+ +P V G++ E + R ++ +S +++P+ + GL Sbjct: 513 LRQALQLGSFVLHYQPKVKIASGKIDGCEALVRWNHPDKGMISPDDFIPLAEETGLIIAL 572 Query: 461 DRLQISRLIPLLRYW-----PEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIII 515 + + W P +A+ ++ ++ F ++ L + + + + Sbjct: 573 GEWVLREACRQFKAWQAQGLPPIKIAVNLSARQFLQSDFVESIQTILHEFDIDPH-WLDL 631 Query: 516 ELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRN 575 EL E+ V + R+ ++ + +G ++++ G S ++++ ++ LK+ + + Sbjct: 632 ELTESMVMEDPDRIAKLLAELKQIGFALSLDDFGTGYSSLNYLRRFPIDCLKIDRSFILD 691 Query: 576 IEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDT 635 + + S++ A GV +R ++ L QG F S+PL Sbjct: 692 VASDATAASVANSVIGIAHSLGIHAIAEGVETREQYAFLAMCECDSIQGYLF--SKPLPA 749 Query: 636 N 636 N Sbjct: 750 N 750 >UniRef50_A4BL55 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BL55_9GAMM Length = 945 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 87/434 (20%), Positives = 180/434 (41%), Gaps = 16/434 (3%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A D TGL NR+ F L L + ++ V+ + + F ++++ GH+ ++ Sbjct: 517 ATHDALTGLPNRMLFSEHLRQALVEADRHNRRLTVICLAIDHFQEVNNSLGHAAGDDLLC 576 Query: 284 TLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDR 343 + + + R +LAR +F L P + + G K + + Sbjct: 577 AFSQRVGQCLRR--SDVLARLGGDEFIILCPE--IVAPDFTIGITEKILSIMEEGFHAGS 632 Query: 344 DDMI---HIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRW 399 ++++ IG+ + SG+ E ++++A++A R A G N++ +Y L + V Sbjct: 633 NEVVVTTSIGVALYPESGKTVEALIKNADAAMRQAKAAGRNTYVLYGPELGKTAHARVDL 692 Query: 400 RTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRI-FDGNEEVSSAEYMPMVLQFGLS 457 R + + G R++ +P V +G++ E + R G+ V ++P+ + L Sbjct: 693 RRALRYAVRNGELRVHYQPQVELADGRIVAAEALVRWERPGHGLVPPNSFIPLAEESDLI 752 Query: 458 EEYDRLQISRLIPLLRYW-----PEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKR 512 + D + + L+ W P +++ V+ L R R R L + R R Sbjct: 753 VQIDSEVLRHVAADLQCWSENGFPLPKISVNVSARQLYRGRLLDDFRQVLDHY-PAARGR 811 Query: 513 IIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGL 572 + +EL E + + + + V+ + LGV A++ G S + ++ + LK+ Sbjct: 812 LEVELTERLLVDAVPQNRRVLDALVDLGVTFAIDDFGTGYSSFGYFRDFLIHTLKIDRSF 871 Query: 573 VRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQP 632 ++ + + + + +++ +V A GV ++ L Q G QG F P Sbjct: 872 IQQLAEEAADARITLAIIGLAKTFDIEVVAEGVELPAQQAFLCQHGCARAQGWLFGKPMP 931 Query: 633 LDTNVKKYSQRYSV 646 D + + Q +V Sbjct: 932 TDEFIAHWKQARAV 945 >UniRef50_Q30VT6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Proteobacteria RepID=Q30VT6_DESDG Length = 935 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 103/443 (23%), Positives = 195/443 (44%), Gaps = 19/443 (4%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 + +I +E +L+ + A D+ TGL NRL ++L + + G H V+ Sbjct: 368 AMFSDITALKENQQQLERV----AHYDLLTGLPNRLLLGDRLKQAIRQTRRRGMHLAVVF 423 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAA-LLPHRTLK 319 I L F ++D GH+ V ++ ++ + T ++R L AR +F A LL + Sbjct: 424 IDLDGFKEVNDQHGHA-VGDKLLSVLSRRMTQVLREDDTL-ARLGGDEFVAVLLDLPDIS 481 Query: 320 EAESIAGQLIK-AVDTLPNNKMLDRDDMIHIGICAWRSGQD--TEQVMEHAESATRNAGL 376 + I +LI+ A +P L + IG+ + G+D +Q++ A+ A A Sbjct: 482 VSVPILDRLIEVAAQPVPIGDAL-CEVSASIGVSYYPQGEDIDADQLLRQADQAMYRAKQ 540 Query: 377 QGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRI 435 G N + ++D R IE+ L+ G LY +P V R G+V E + R Sbjct: 541 AGKNRYHVFDTEKDRTLRTRHEELDSIEKALANGQFLLYFQPEVNMRTGEVLGAEALIRW 600 Query: 436 FDGNEEV-SSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVE----SLI 490 + S A ++P++ L + I + + W + L + ++V L+ Sbjct: 601 QHPTRGLLSPASFIPIIENHPLGIDVGEWTIEAALTQIEVWRKAGLHVPISVNIGARHLL 660 Query: 491 RPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGL 550 +P F LR L + +Q + + +E+ E + ++ ++ L +G+R A++ G Sbjct: 661 QPDFIMHLRGMLSRHPGAQPQDLELEILETSAVEDFVQVSQLMALCGRMGLRFALDDFGS 720 Query: 551 TLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSE 610 S +++K L LLK+ +R++ + ++ ++ +L+ A GV S Sbjct: 721 GYSSLTYLKRLPAHLLKIDQDFIRDMLEDPDDIAILDALLALARSFGRNCIAEGVESIQH 780 Query: 611 WQTLIQRGVTGGQGDFFASSQPL 633 + L++ G GQG +A P+ Sbjct: 781 GEMLLRMGCEWGQG--YAIGHPM 801 >UniRef50_B9QZL6 Cyclic diguanylate phosphodiesterase domain protein n=2 Tax=Labrenzia RepID=B9QZL6_9RHOB Length = 759 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 93/425 (21%), Positives = 188/425 (44%), Gaps = 12/425 (2%) Query: 226 QDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTL 285 D +GL NR F L +L+D G V+ I L F ++DT GHS + + Sbjct: 320 HDALSGLPNRAHFHRLLTDMLQDTNSRGRETAVIYIDLDHFKDINDTLGHSAGDMVIVAV 379 Query: 286 TNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE-AESIAGQLIKAVDTLPNNKMLDRD 344 L+ + ++AR +FA ++P+ E E I Q+ + + Sbjct: 380 GKRLTHVL--GDNGIVARISGDEFAMVIPNSKSDEWLEYILDQIQDEISQPIKIGARELH 437 Query: 345 DMIHIGI-CAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLI 403 + IG A R G D ++++ A+ A +A G N + ++ ++ + + + + Sbjct: 438 ASLSIGASVAPRDGIDPDELLRKADIALYDAKENGRNRRSFFEANMEDHVQSKDKLSREL 497 Query: 404 EQMLSRGGPRL-YQKPAVTREGQVHHRELMCR-IFDGNEEVSSAEYMPMVLQFGLSEEYD 461 L L YQ + T ++ E + R + VS A+++P+ + GL E Sbjct: 498 RMALKNDELTLAYQPQSDTAAQRIVSVEALARWTKEDGTVVSPAQFIPVAEETGLINELG 557 Query: 462 RLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEAD 521 +++ WP+ +++ V+ PRF + ++ +R+ IE+ E+ Sbjct: 558 LWVLNKACAKAHDWPDVVMSVNVSPNQFKHPRFVEKVM-AILATNNLAPQRLEIEVTESV 616 Query: 522 -VGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRT 580 G++ + L+ + RL N LG++VA++ G S S+++ + LK+ + +++ Sbjct: 617 FAGRNDTVLKSLRRLKN-LGIKVALDDFGSGYSSLSYLRRFPFDTLKVDRDFLSDMDGNP 675 Query: 581 ENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL-DTNVKK 639 E + ++ S+++ + A G+ + + + L G QG F SQPL +T++ K Sbjct: 676 EAEAIIVSIIQLGKALGMTIVAEGIETIEQIRFLQAHGCHRMQGYFI--SQPLNETDLAK 733 Query: 640 YSQRY 644 + + + Sbjct: 734 FLEDF 738 >UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. WCH70 RepID=C5D2J8_GEOSW Length = 568 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 92/434 (21%), Positives = 197/434 (45%), Gaps = 21/434 (4%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 +H R + A D T + NR + +L +++ +K ++ + L F ++D Sbjct: 129 EHKRNVEQLTRLALYDTLTNVPNRYLLEKRLESIIRMSKKHNQSFALLFLDLDRFKNIND 188 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIK 330 T GH +V + T M+R + AR+ +F +LP+ + ++EA +A K Sbjct: 189 TLGH-RVGDMLLKETAQRLKRMLRKQDTI-ARFGGDEFVIILPNLKHIREAAYMAE---K 243 Query: 331 AVDTLPNNKMLDRDDM---IHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYD 386 V++L + ++ IGI + G D E ++ A+ A A G N +A+Y Sbjct: 244 IVESLKRPFCFNHQEIYISTSIGISVYPYDGTDKETLIRMADRAMYQAKKNGRNQYALYH 303 Query: 387 DSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCRIFDGNEE--VS 443 + G+ + T + + L RG LY +P + + Q+ E + R ++ E+ +S Sbjct: 304 AGMHGNGKQLFQLETALRKALERGEFELYYQPQLDIKTKQIRAVEALIR-WNHPEKGFIS 362 Query: 444 SAEYMPMVLQFGL---SEEYDRLQISRLIPLLRY-WPEENLAIQVTVESLIRPRFQRWLR 499 ++P+ + GL ++ +Q + L+ +P ++I ++ + F + L+ Sbjct: 363 PGMFIPLAEESGLITPISDWIMMQACEHLKQLQLRFPYVKMSINISPIYFQQIDFLKKLQ 422 Query: 500 DTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIK 559 T+ + R I +EL E+ V H + + + +G+ +A++ G S S++ Sbjct: 423 KTIESVNVNPR-LIELELTESAVMPHAEQSVERLTKLKTMGMSIAIDDFGTGFSSLSYLH 481 Query: 560 ELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGV 619 +++LK+ + + + ++ +V++++ +V A GV ++ ++Q L ++ Sbjct: 482 RFPIDILKIDRSFTKQLSRYQQDSAIVKAIIMMAHSLQIRVVAEGVETKKQYQILEKQSC 541 Query: 620 TGGQGDFFASSQPL 633 QG + S+PL Sbjct: 542 DFVQG--YYVSKPL 553 >UniRef50_B2UGH6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=30 Tax=Burkholderiaceae RepID=B2UGH6_RALPJ Length = 917 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 102/449 (22%), Positives = 194/449 (43%), Gaps = 28/449 (6%) Query: 195 TSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLE---DQEK 251 T SA+ +I AR +L L A +D TGL NR +F ++ ++E Q Sbjct: 460 TPSAVLISFNDIGPARAAQQQLTFL----AQRDALTGLYNRAYFSQRMQAVMEQAASQAN 515 Query: 252 VGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAA 311 G V+ + L F ++DT GH + + LS + + LAR +F Sbjct: 516 EGHQVAVLFLDLDGFKKVNDTAGHEAGDHLLRIVAQRLSACVRQ--SDTLARLGGDEFVV 573 Query: 312 LLPH-RTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAES 369 LL + R+L EAE +A +++ ++ + + IGI + G D ++ A++ Sbjct: 574 LLDNVRSLGEAERLAKRIVHSIAQPFSTSGTEYYLGASIGIALYPEHGNDAATLLRCADA 633 Query: 370 ATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREG-QVHH 428 A NA G N +Y L ++ + + + + L+ G L +P V + Sbjct: 634 AMYNAKQNGRNQHRVYTARLSQRAQRRFQLEYHLRRALTAGELSLRFQPIVDATSMDIVG 693 Query: 429 RELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW-----PEENLAI 482 E++ R EVS AE++P+ GL + +++ +W PE +A+ Sbjct: 694 AEVLLRWHSTELGEVSPAEFIPVAEDAGLIGDIGEWVLAQACRQAAHWRATCMPEFFVAV 753 Query: 483 QVTVESLIRPR-FQRWLRDTLMQCEKSQ---RKRIIIELAEADVGQHISRLQPVIRLVNA 538 ++ PR F L T+ +C + +E+ E + + + + P++ + A Sbjct: 754 NLS------PRQFGEGLVPTISRCLTEAGLPASALEMEITEGLLMRDTAAVMPMLDALTA 807 Query: 539 LGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTST 598 LG+R++++ G S S+++ ++ LK+ V I + ++ ++ +++V + Sbjct: 808 LGIRISIDDFGTGYSSLSYLQRFPIDNLKVDRSFVSGIPRHRDSVVISRAVVAMAASLDM 867 Query: 599 QVYATGVRSRSEWQTLIQRGVTGGQGDFF 627 V A GV + + + L G QG F Sbjct: 868 TVTAEGVETLEQAEFLQAAGCDKLQGFLF 896 >UniRef50_A7GAB5 Multisensor diguanylate cyclase/phophodiesterase n=11 Tax=Clostridium RepID=A7GAB5_CLOBL Length = 892 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 84/423 (19%), Positives = 187/423 (44%), Gaps = 20/423 (4%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A D TGL+NR + + E V+ I L F ++DT GH + + Sbjct: 472 AYYDSLTGLSNRKKIIETINKTINSYE--NEKFAVLFIDLDHFKSINDTLGHDVGD---Y 526 Query: 284 TLTNLLSTF-MMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLD 342 L + + F M+ P + R +F + ++ +AE +A K TL ++ Sbjct: 527 VLEKVSARFKMLLSPKNKIGRLGGDEFIIVQNITSISDAEKLAC---KICTTLNHSIKYK 583 Query: 343 RDDMI---HIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVR 398 DD+ IGI + G+DT +M++A++A A GG + +Y S+ E+ ++ Sbjct: 584 EDDLFIGASIGISIYPEDGKDTSTLMKNADAAMYAAKKNGGYKYEVYSRSMNERALDDLI 643 Query: 399 WRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLS 457 + + L + +Y +P + ++ E + R N+ +S +++P+ G Sbjct: 644 LENRLRRALEKNELLVYFQPIYHLKTSKIIAMESLVRWKFDNKIISPNQFIPLAKNIGEI 703 Query: 458 EEYDRLQISRLIPLLRYWPEEN---LAIQVTVESLIRPRFQRWLRDTL--MQCEKSQRKR 512 D +++ W ++N L + V + S + + + ++ + L ++ K + Sbjct: 704 ANIDNWVLNKACSQCNLWQKQNNKPLYVSVNI-SFKQMKDKNFVDNVLNILRTTKLEPSY 762 Query: 513 IIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGL 572 + +E+ E + + + + + G++++++ G S S++ +L ++ +K+ + Sbjct: 763 LCLEITEDEAMEDVDLSIKTLEALKRHGIKISLDDFGTGYSSLSYVTKLPIDNIKIDKSI 822 Query: 573 VRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQP 632 ++NI K ++ +V+S++ + A GV + + + L + G QG + + P Sbjct: 823 IKNIHKDNKSLQIVKSIILMSKSLDINIVAEGVETIEQLEILQELGCDFIQGFYISEPLP 882 Query: 633 LDT 635 + T Sbjct: 883 IKT 885 >UniRef50_Q2BQQ4 Signaling protein with a sensor domain, CHASE, GGDEF and EAL domains n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQQ4_9GAMM Length = 731 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 105/448 (23%), Positives = 196/448 (43%), Gaps = 38/448 (8%) Query: 208 NAREQHSRLDTLIRSYAAQ-DVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDF 266 N RE+ ++T +Y A DV TGL+NR F QL +L+ + ++ G + I L F Sbjct: 291 NYREKLQAIET--ATYRANYDVLTGLSNRYHFSQQLQSLIYEHQRHGHMFALFFIDLDYF 348 Query: 267 NMLSDTWGHSQVEEQFFTLTNLLSTFMMRY-----PGALLARYHRSDFAALLPH-RTLKE 320 ++D WGH +E LL F R L+AR +F +L + + Sbjct: 349 KEVNDNWGHPAGDE-------LLRLFAHRMVSIVRSDDLIARLAGDEFVIVLKDLESATQ 401 Query: 321 AESIAG--QLIKAVDTLPNNKMLDRDDMIH-IGICAWRS-GQDTEQVMEHAESATRNAGL 376 AE +A QL L N + L + H +GI + + G E ++++A+ A A Sbjct: 402 AELLAEKLQLELGEPYLINGQYL---SVTHSLGIAMYPADGGSMELLLQNADRAMYEAKR 458 Query: 377 QGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCR- 434 G N ++D L ++ + +V+ I L +G LY +P + G+V E + R Sbjct: 459 AGKNRIFFFNDHLSQEVKRHVQVHNEILDGLRKGQFELYLQPIMALSSGRVSKCEALVRW 518 Query: 435 IFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRF 494 + +S E++P+ Q G + + L E +IQV++ + + Sbjct: 519 VHPERGLISPVEFIPVAEQTGAIKPLGEWILDEACHLSNQLRESGHSIQVSINRSVAEFY 578 Query: 495 -----QRWLRDTLMQCEKSQRKRIIIELAEA---DVGQHISRLQPVIRLVNALGVRVAVN 546 QRWL+ ++ I+ E+ E+ D G S+L I ++ G+ +++ Sbjct: 579 PKDADQRWLQ--IIDSHNVPHDMIVFEITESLLMDGGD--SQLDK-INMLRGKGIAFSID 633 Query: 547 QAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVR 606 G + ++++ V+ LK+ + ++ + +++ LV+ +++ +V A GV Sbjct: 634 DFGTGYSAINYLRHYPVDYLKIDRSFITDLLEDEQDRTLVEVIIKMGQTLGIRVVAEGVE 693 Query: 607 SRSEWQTLIQRGVTGGQGDFFASSQPLD 634 +++ L + G QG + P D Sbjct: 694 DQAQMDMLKEFGCDYIQGFYLGKPLPYD 721 >UniRef50_Q30UH2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Campylobacterales RepID=Q30UH2_SULDN Length = 623 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 96/447 (21%), Positives = 192/447 (42%), Gaps = 44/447 (9%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A D T L NR +F L ++ Q+ + + +I L F ++DT GH ++ Sbjct: 187 ANHDYLTNLGNRRYFVELLKDAIKKQKSNNKYMFLFLIDLDHFKTINDTLGHDIGDK--- 243 Query: 284 TLTNLLSTFMMRYPGALLARYHRS-------DFAALLPHR------TLKEAESIAGQLIK 330 LLS R LLA+ +RS D LL LK A+S A +L+ Sbjct: 244 ----LLSEVAKRM--GLLAKLNRSTISRIGGDEFCLLSDTYEDKVTCLKRAQSFAQELL- 296 Query: 331 AVDTLPNNKMLDRDDMIHIGICAWRSGQD----TEQVMEHAESATRNAGLQGGNSWAIYD 386 +T+ + ++D ++ + +++ A+ A A L+G + +++ Sbjct: 297 --ETIKHTYIVDEHNLYISSSIGVSIIDNPNITANTLIKEADIAMYEAKLKGRDGVILFN 354 Query: 387 DSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEEVSSA- 445 + L + + + + + L +P V ++G+V E++ R NE++ S Sbjct: 355 NELSVRVERKLEVERFLRFAIKKEEITLNYQPQVDKKGKVVGCEVLVRW--HNEQLGSVG 412 Query: 446 --EYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAI-QVTVESLIRPRF-QRWLRDT 501 E++P+ Q G E + L W ++ L + Q ++ +R F ++ D Sbjct: 413 PDEFIPISEQTGFIIELGHYILEESFKTLSEWDKKGLKLEQFSINISMRQMFCNTFIDDM 472 Query: 502 LMQCEK----SQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 L+ C K S ++I E+ E+ + I +L + A G+R +++ G S S+ Sbjct: 473 LLLCAKYLNDSLSSKLIFEITESSAAEDIPKLINTMNRAKACGIRFSMDDFGTGYSSLSY 532 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 ++++ + LK+ + + ++ +V++++ V A GV ++ + + LI Sbjct: 533 LRQIPIYELKIDKAFINELGNPKKDANMVKTILNIAKNLGLSVVAEGVETQMQEKFLIDE 592 Query: 618 GVTGGQGDFFASSQPLDTNVKKYSQRY 644 QG +F S+PL + K+ + Y Sbjct: 593 KCDILQGYYF--SKPLSKD--KFEEFY 615 >UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q609J7_METCA Length = 712 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 96/456 (21%), Positives = 194/456 (42%), Gaps = 30/456 (6%) Query: 203 LREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIR 262 R+I RE R I+ A D T L NR+F +L +E + VM I Sbjct: 266 FRDITQRREAEDR----IKHLAHHDPLTNLPNRVFLHGRLEQAIELARREQNQVAVMFID 321 Query: 263 LPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGA-LLARYHRSDFAALLP-HRTLKE 320 L +F ++DT GH ++ + L + + PG+ ++ R +F ++ +R Sbjct: 322 LDNFKRINDTLGH-RIGDAL--LEQVAARLTENVPGSQVVGRLGGDEFIVVITGNRVSTT 378 Query: 321 AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGG 379 + ++A ++++++ + IGI + + G E +M+HA++A +A +G Sbjct: 379 SAAMAERILESLCRPYTVEDYQLHSGASIGIAIYPADGNSAETLMKHADAAMYHAKSRGR 438 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV--------TREGQVHHREL 431 N++ + ++ R + + L GG +L+ +P + + E + R Sbjct: 439 NTFEFFSQAINRGVRERLDIENGLRDALKHGGFKLHYQPQIDLTTGSICSVEALLRWRHP 498 Query: 432 MCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTV 486 + + + + AE ++L GL I R LR W + +A+ V+V Sbjct: 499 LLGVIAPDRFIPIAEETKLILPLGL------WVIDRACHQLRAWRNDGIAGVRMAVNVSV 552 Query: 487 ESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVN 546 + L F L ++++ I +E+ E+ + +++SR+Q +++ + G+ ++++ Sbjct: 553 KQLQDESFFEAL-GSIVERHGLSGSDIELEITESAIMENLSRVQALLKSLQDYGITLSID 611 Query: 547 QAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVR 606 G S +K L ++ LK+ V +IE N + ++ ++ A GV Sbjct: 612 DFGTGYSSLGRLKLLPIQSLKIDRSFVHDIETDHGNAKICDGIIALGHSLGLKIIAEGVE 671 Query: 607 SRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 + ++ L G QG A P D K +Q Sbjct: 672 TDAQKNLLQNSGCDAIQGFLIAKPLPADDVAKLITQ 707 >UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Bacteria RepID=B7KEB0_CYAP7 Length = 684 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 94/440 (21%), Positives = 190/440 (43%), Gaps = 56/440 (12%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A D T L NR F +L+T L T VM I L F ++DT GH+ +E Sbjct: 256 AYYDTLTDLPNRSLFYEKLSTALAKAYLEETLIAVMFIDLDGFKNINDTLGHTLGDE--- 312 Query: 284 TLTNLLSTFMMRY-----PGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLP-- 336 LL +F R +LAR+ +F L+P +E I + + ++ P Sbjct: 313 ----LLGSFAQRLRHNLRSSDILARWGGDEFTILIPQIKNEEEIEICAKRVFSILQQPFQ 368 Query: 337 -NNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRG 395 N +L I + I R GQD E ++++A++A G N + IY + K Sbjct: 369 VGNHLLYLKASIGVAIYP-RDGQDAETIIKNADAALYRTKEMGRNHYQIYHPLITSKTSE 427 Query: 396 NVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEE-----------VSS 444 + L+ Q L + L+ +P + + Q +C G E VS Sbjct: 428 RLEMENLLHQALEKDQFLLHYQPQINIKNQA-----IC----GMEALIRWEHPTLGLVSP 478 Query: 445 AEYMPMVLQFGL-----------SEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPR 493 A+++P+ + GL + E +RL + +P +R +A+ ++ + +P Sbjct: 479 AKFIPIAEESGLIISIGEWVLRQACEQNRLWQKKGLPPVR------VAVNLSAQQFQQPN 532 Query: 494 FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLV 553 F + L + + + + +E+ E + +++ ++ + +GV ++++ G Sbjct: 533 FVNIVTKILAET-NLEPQFLELEITETTIMKNLEFSCQIVHDLKHMGVHISMDDFGTGYS 591 Query: 554 STSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQT 613 S ++K++ +K+ +++++ + ++ ++ +++ G + +V A GV ++ + + Sbjct: 592 SLGYLKQIPFNTIKIDQSFIKDLQDKPQDLAIISAVLAIGRGFNVRVIAEGVETQHQVEL 651 Query: 614 LIQRGVTGGQGDFFASSQPL 633 L + QG F S+PL Sbjct: 652 LRKLECEEMQG--FKFSKPL 669 >UniRef50_C5SFB8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SFB8_9CAUL Length = 726 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 103/426 (24%), Positives = 182/426 (42%), Gaps = 27/426 (6%) Query: 221 RSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEE 280 + A D TGL NR F ++L E + G VM + L F ++DT GHS +E Sbjct: 287 KHMALHDGLTGLPNRTLFTDRLNQATERLRRHGGSVAVMCVGLDRFKDVNDTLGHSAGDE 346 Query: 281 QFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKM 340 + + M+R G LAR F + +T +A S A + ++ L Sbjct: 347 LIRHSAQKIGS-MIR-AGDTLARLGGDVFVII---QTDTDAHSAAALAKRVLEGLKGQVT 401 Query: 341 LDRDDM---IHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGN 396 L+ + IG+ + S + + + A+ A A QG + +A ++ + Sbjct: 402 LESGPVYSSCSIGVTLLQESDIEAAEALRQADLALYRAKEQGRSQYAFFEIEMD----AT 457 Query: 397 VRWRTLIEQMLSRG----GPRLYQKPAVTREGQVHHRELMCRIFDGNE-EVSSAEYMPMV 451 ++ R L+E L + +P V G++ E + R +S A ++P+ Sbjct: 458 IKLRKLLETGLREAIHVEAIEVVYQPQVDHNGRIVGVEALARWSHPQRGPISPAYFVPLA 517 Query: 452 LQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRK 511 + GL + L + R + + WP +AI V+ L RF L+D L + R Sbjct: 518 EECGLMMDLGTLIMRRALIDSKRWPGLKVAINVSATQLRSSRFLPELKDMLRETGVEPRS 577 Query: 512 RIIIELAEADVGQHISRLQPVIRLVNAL---GVRVAVNQAGLTLVSTSWIKELNVELLKL 568 I IE+ E G ++ QP +NAL G +A++ G S S++ V+ +K+ Sbjct: 578 -IEIEITE---GMLLNDDQPTQNTLNALRQMGFSIALDDFGTGYSSLSYLSRYPVDKIKI 633 Query: 569 HPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFA 628 V N+ + + L++++++ + A GV ++++ L Q G QG F Sbjct: 634 DRSFVSNLGVDPDAEALIRAIIKLAKALHLSILAEGVETKAQSHILRQAGCAIIQGYLF- 692 Query: 629 SSQPLD 634 S+P+D Sbjct: 693 -SKPVD 697 >UniRef50_Q21RL1 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=2 Tax=Proteobacteria RepID=Q21RL1_RHOFD Length = 853 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 118/491 (24%), Positives = 205/491 (41%), Gaps = 35/491 (7%) Query: 164 GQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSY 223 G+ + +R L+G R L + P R L I +H R + I Sbjct: 373 GERVEADEVSRSLDGSREQTYLSI--KLPLRQPDGSIYALCGISTDITEHKRSEDAIHQL 430 Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A D T L NR F +L L+ E+ G ++ I + +F L+DT GH+ +E Sbjct: 431 AFYDPLTLLPNRRFLMERLQQTLKANERQQQCGALLFIDVDNFKDLNDTLGHAMGDELLR 490 Query: 284 TLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT------LKEAESIAGQLIKAVDTLPN 337 + LST LAR +F LL + L++ +A ++++ + Sbjct: 491 QMAVRLSTCTR--AEDTLARQGSDEFVLLLCDLSPDLDAALEQTRHVAQKILQHIAEPYL 548 Query: 338 NKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGN 396 + + IGI + + +++ + A+ A A +G N+ ++ ++ + Sbjct: 549 LETRHYQSTVSIGIAMFGDTPTSRDELFKQADLAMYRAKAEGRNALCFFNPAM----QAQ 604 Query: 397 VRWRTLIE----QMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEE-VSSAEYMPMV 451 V RT IE Q L+R LY +P V +GQ E + R V E++P+ Sbjct: 605 VTARTAIEADLHQALARSEFVLYYQPQVNIDGQQFGVEALVRWQHPQRGLVPPLEFIPIA 664 Query: 452 LQFGLSEEYDRLQISRLIPLLRYW---PEE---NLAIQVTVESLIRPRF----QRWLRDT 501 GL R +S L W PE+ ++A+ V+ + F ++ LRDT Sbjct: 665 ESTGLILPLGRWILSTACRQLVAWAASPEQAHWSIAVNVSARQFRQSDFVQTVEQVLRDT 724 Query: 502 LMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKEL 561 ++ + + L + DV I+R+ + ALGVR +++ G S S +K L Sbjct: 725 GANPQRLELELTESLLVD-DVEVVIARMSAL----KALGVRFSLDDFGTGYSSLSMLKRL 779 Query: 562 NVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTG 621 ++ LK+ VR++ ++ +V+++V + QV A GV + + L+ G T Sbjct: 780 PLDQLKIDRSFVRDLRHDPQDANIVKAIVTLGFAMNLQVIAEGVETAEQRDALVNLGCTH 839 Query: 622 GQGDFFASSQP 632 QG F P Sbjct: 840 FQGYLFGRPAP 850 >UniRef50_C6HUY5 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUY5_9BACT Length = 702 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 94/426 (22%), Positives = 192/426 (45%), Gaps = 27/426 (6%) Query: 223 YAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGI-VMMIRLPDFNMLSDTWGHSQVEEQ 281 YA +D TGL N+ F LA + ++ G VM+I + DF ++DT+GH+ +E Sbjct: 282 YAVRDPLTGLFNQRVFWELLAYEIGRSQRHGNQPFSVMIIDVDDFKKINDTFGHTFGDEF 341 Query: 282 FFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVD--TLPNNK 339 + ++ + ++ARY +FA +LP + A ++A ++ +L + + Sbjct: 342 LQKIAGVIQATARKED--IVARYGGDEFAVILPEAASEHAVAMAKRIRAGFQRFSLESPE 399 Query: 340 MLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDS-LPEKGRGNV 397 + + IGI +W + + + A++ A G N + D+ + E R Sbjct: 400 GVRAKSSVSIGIASWPEHALEPKDLFLVADNMMYRAKAHGKNGHCLPTDADVVEVLRSVS 459 Query: 398 RWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGL 456 +++Q + Y +P V+ EG V E++ R+ + + + E++ + + GL Sbjct: 460 EKYLILQQAIEDRSILPYFQPIVSAAEGTVEAYEVLMRVEYRGKILPAGEFIEIAEESGL 519 Query: 457 SEEYDRLQISRLIPLLRYWPEE--------NLAIQVTVESLIRPRFQRWLRDTLMQCEKS 508 D + + + R+ E+ NL+ + V + P +R +R+T ++ Sbjct: 520 ISSLDFIVMEK---AFRHAVEQNFEGLLFINLSPKAIVTAEFIPTIRRIIRETGIRS--- 573 Query: 509 QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKL 568 ++I+ E+ E + ++ S L+ I + + G R A++ G S +++K +V+ LK+ Sbjct: 574 --RQIVFEITERETVRNASLLEVFISELKSDGSRFAIDDFGSGFSSMTYLKRFSVDFLKV 631 Query: 569 HPGLVRNIEKRTE-NQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFF 627 +RN+ + ++ +V S+ Q A V S + + + G+T QG F Sbjct: 632 EGDFIRNLPQTGSIDRAIVASIATLTREIGIQTVAESVESPEILEEVRRHGLTLAQG--F 689 Query: 628 ASSQPL 633 +PL Sbjct: 690 GIGRPL 695 >UniRef50_A1K7N9 GGDEF/EAL/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K7N9_AZOSB Length = 889 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 99/432 (22%), Positives = 186/432 (43%), Gaps = 19/432 (4%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A D+ T L NRL + L T + + T VM++ L F ++D GH+ +E Sbjct: 461 ANYDLLTDLPNRLRMSDCLETAIAAARRSHTQVGVMLVDLDRFKNVNDALGHALGDELLA 520 Query: 284 TLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPNNKMLD 342 + L + G L RY +F +L R EA ++A + A+D P Sbjct: 521 GVAERLRKHLRH--GDTLGRYGGDEFLLVLEQLRDAGEAAAVARTMNSALDQ-PFLMRGG 577 Query: 343 RDDMIH--IGICAWRSGQDTE-QVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRW 399 ++ I IGI + DT ++++ A++A A G N++ Y + L + Sbjct: 578 QELYIKASIGISLYPEDGDTAAELIKDADAAMYEAKRLGRNTFRYYQEDLTRTANERLAL 637 Query: 400 RTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIF-DGNEEVSSAEYMPMVLQFGLS 457 + + + L +Y +P V G+V E + R+ DG + A+++P++ + G+ Sbjct: 638 ESRLRRALDESMFEMYYQPLVALNSGEVLGAEALVRLRPDGGPRIGPADFIPVLEESGMI 697 Query: 458 EEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKR 512 E R + R W + L + ++ E + R LR+ L + K Sbjct: 698 AELGRWVQREVCRQGRAWLDAGYDFQLLTLNLSAEEVRRGGVVDNLREVLAETGFPAEK- 756 Query: 513 IIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGL 572 + +E+ E+ + Q S + + LGVR++++ G S S++K V LK+ G Sbjct: 757 LEVEITESGLMQRGSEALDFLYELKGLGVRLSIDDFGTGYSSLSYLKLFPVNKLKIDRGF 816 Query: 573 VRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQP 632 + +I + + L +++ V A GV + ++ L ++G QG + S P Sbjct: 817 ITDIPEDQNDVQLTTTIIALARNLGLDVLAEGVETEAQRTFLAEKGCDAYQG--YLCSPP 874 Query: 633 LDTNVKKYSQRY 644 ++ V + +R+ Sbjct: 875 VEAAV--FQERF 884 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 92/432 (21%), Positives = 181/432 (41%), Gaps = 11/432 (2%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 I YA D TGL NR +L + + V+ + L F ++DT GH+ + Sbjct: 589 IERYAHFDALTGLANRHALYRRLGQAITSVHQHQHPLAVLFVDLDKFKTINDTLGHAVGD 648 Query: 280 EQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNK 339 + LS F P +LAR +F +LP + A +A ++ A+ Sbjct: 649 VVLREVAGRLSDFAG--PDDILARLGGDEFLLVLPGADERAASEVAACILTAMSVPVRVD 706 Query: 340 MLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVR 398 + IG+ + R G++ + ++ +A+ A A +G N++ +Y + ++ Sbjct: 707 GRELPTTPTIGVSLYPRDGEEADDLIRNADIAMYQAKARGRNTFQLYTPDMNAAAAERLQ 766 Query: 399 WRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGL 456 + + RG L+ +P + +G V E + R VS ++P+ + GL Sbjct: 767 LQGELRNAHLRGEIMLHYQPQIDVTDGHVVGCEALMRWKHPTLGMVSPGRFIPLAEESGL 826 Query: 457 SEEYDRLQISRLIPLLRYW-----PEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRK 511 I W P +A+ ++ + F + D L + Sbjct: 827 IITLGNWAIREACRQAMVWQRAGLPPLTVAVNLSGCQFQQSNFTAVVADALADTSLPP-Q 885 Query: 512 RIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPG 571 + +EL E+ V + ++ + + ALGV+++++ G S +++K V+LLK+ G Sbjct: 886 YLELELTESIVMHDVEQVIATLTELKALGVQLSIDDFGTGYSSLNYLKRFPVDLLKIDQG 945 Query: 572 LVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQ 631 VR++E + +V++++ + ++ A GV ++ + L GV QG +F+ Sbjct: 946 FVRDVETDPSDAAIVRAIIALGKILNLRLIAEGVETQGQLDYLHAAGVDFIQGYYFSRPL 1005 Query: 632 PLDTNVKKYSQR 643 P + +QR Sbjct: 1006 PAEDMATYLAQR 1017 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 97/434 (22%), Positives = 194/434 (44%), Gaps = 31/434 (7%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 I++ A DV T L NR F ++L + + + G +M + L F ++D+ GH V Sbjct: 438 IKNLAYFDVLTALPNRRLFTDRLQIAIANAHRHGQQLAIMFLDLDLFKRINDSLGHG-VG 496 Query: 280 EQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNK 339 +Q T + +R G +AR +F LLP L E +A + + + Sbjct: 497 DQVLVETAARISHCVR-EGDTVARLGGDEFTVLLPE--LDHLEDVAKLAERVIAHVKQPF 553 Query: 340 MLDRDDM---IHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRG 395 ++D +++ IGI + G E ++++A++A A G NS+ +Y ++ + Sbjct: 554 LVDDNELYVTTSIGIAVYPEDGTTVEALIKNADTAMYRAKDLGRNSYQLYTAAMNARSFE 613 Query: 396 NVRWRTLIEQMLSRGGPRL-YQKPAVTREGQVHHRELMCRIFDGNEE-VSSAEYMPMVLQ 453 + + + L+R RL YQ + +G++ E + R VS +++P+ Sbjct: 614 RLTMESSLRHALTREEFRLVYQVKVDSEDGRMSGVEALVRWHHPEMGLVSPVDFIPLAEA 673 Query: 454 FGLSEEYDRLQISRLIPLLRYW-----PEENLAIQVT----VESLIRPRFQRWLRDTLMQ 504 G+ + + ++W P +A+ V+ VE+ + R LR+T + Sbjct: 674 MGVISDIGEWVLRTACRQCKHWMDLGLPPVRIAVNVSAQQFVETDVPEVVARALRETGLP 733 Query: 505 CEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVE 564 + + +EL E + Q + + V++ + A+GVR++++ G S S++K + ++ Sbjct: 734 PQYLE-----LELTETVLMQRVDEVVAVLKSLRAMGVRISIDDFGTGYSSLSYLKRMPID 788 Query: 565 LLKLHPGLVRNI----EKRTENQL-LVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGV 619 LK+ V +I K TE+ +V +++ + A GV + + + L +G Sbjct: 789 ALKVDRSFVNDIFDGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGVETPEQAEFLRSKGC 848 Query: 620 TGGQGDFFASSQPL 633 QG + S+P+ Sbjct: 849 DEVQG--YLISRPV 860 >UniRef50_B8KRF7 Ggdef:eal:histidine kinase, hamp region n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KRF7_9GAMM Length = 639 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 99/426 (23%), Positives = 174/426 (40%), Gaps = 27/426 (6%) Query: 211 EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLS 270 ++ SRL+ R D TGL R F +L +LE ++ G G V + R+ D ++ Sbjct: 222 QEASRLEK-TRENTEIDRLTGLVLRDPFLRRLRAMLESDDENG-RGSVALTRINDLAKMN 279 Query: 271 DTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIK 330 +G ++ + + L T + G R + SDF + P T + ++ A +L Sbjct: 280 QVYGRKTLDTLLEQIGSDLRTLIRENRGWAAGRLNGSDFCLMAP--TELDPKAAAEELYS 337 Query: 331 AVDTLPNNKMLDRDDMIHIGICAWRSGQDT-EQVM----------EHAESATRNAGLQGG 379 + + +D ++ C + DT QVM EH ES +G Sbjct: 338 VLAHAFESNSIDTVELP--SACVEYAKDDTIAQVMTALDGALVSSEHQESMPIVLASRGS 395 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRI-FDG 438 +S +P + + ++ W+ ++ L RL P + + ++ H E M RI D Sbjct: 396 SS------VIPLREQADL-WQRELQYALENKTFRLQLFPVIDADSRLIHEEGMLRIELDD 448 Query: 439 NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWL 498 + + S+ E+MP + G + E DR + + + L I ++ L F W Sbjct: 449 HSQRSAGEFMPWAHRLGRAHEVDRAVVQLALDHIATHLSP-LCINLSASCLTDTSFAIWF 507 Query: 499 RDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWI 558 D L++ +S + +++ E+ H + R V GV+V V G L + Sbjct: 508 EDLLLK-RRSLGSYLSLDIGESSAYAHPEGFHRLTRRVREFGVKVGVEHMGYMLKDIGKL 566 Query: 559 KELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRG 618 EL V+ +K+ VR I+ T NQ L+++ GV + +E + G Sbjct: 567 GELGVDYIKVDSLFVREIDHNTGNQALLRTFAYISQSLGVPCIGEGVSNAAEREKTFDCG 626 Query: 619 VTGGQG 624 TG G Sbjct: 627 ATGATG 632 >UniRef50_C6XCG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCG6_METSD Length = 674 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 106/484 (21%), Positives = 195/484 (40%), Gaps = 38/484 (7%) Query: 174 RILNGERGSNVLGTIYEWPP--RTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTG 231 R+L G + TI P R + +L+E Q LD L TG Sbjct: 209 RVLAGHASPILKSTISPLSPEGRQTPGTIIVLQEGQALAPGQPELDPL----------TG 258 Query: 232 LNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLST 291 ++NR + +L L G + M + L F +++DT GH+ + + +++ Sbjct: 259 IHNRTTLETRLQAALASAHTQGEQHMFMYLDLDQFKIVNDTCGHAVGDALLKQIVSIIRG 318 Query: 292 FMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIH--- 348 + ALLAR +FA LL A IA + ++ + H Sbjct: 319 CL--STDALLARLGGDEFAILLLCCDSDAAGKIADDICNRIEAF---RFAHEQKRFHVSA 373 Query: 349 -IGIC----AWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDS--LPEKGRGNVRWRT 401 IG+ W QD +++ A +A A +G N +Y D+ +K ++W Sbjct: 374 SIGLVRIDHQW---QDISALLQIANAACYTAKQEGRNRTHLYRDTDFAIKKHHEEIQWVN 430 Query: 402 LIEQMLSRGGPRLY-QKPAVTREGQVHHRELMCRIFDGNEE-VSSAEYMPMVLQFGLSEE 459 +E L LY Q+ E H E++ R+ DGN + + +MP +F ++ Sbjct: 431 RLELALEENRFSLYCQRILPLNENSGIHGEILLRLPDGNGGMIPAGAFMPAAERFHITSR 490 Query: 460 YDRLQISRLIPLLRYWPE-----ENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRII 514 DR R++ L + L++ ++ +S+ F ++ + ++ + K + Sbjct: 491 IDRWVTKRVLHWLMQHEHVIDHIDVLSVNISGQSIGDRAFHDYMLELIVSTPATYSK-LC 549 Query: 515 IELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVR 574 E+ E +++ I + G+R +++ G + S +K L+V+ LK+ +R Sbjct: 550 FEITETAAITNLADANSFIASMRRFGIRFSLDDFGSGVSSFGHLKNLDVDYLKIDGQFIR 609 Query: 575 NIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLD 634 I+ +Q +V+ + E +GT + A V + L G+ QG PLD Sbjct: 610 AIDSNVIDQAMVRCICEIANGTGLKTIAEYVETVEVENLLRGMGIHYTQGYLRHKPAPLD 669 Query: 635 TNVK 638 +K Sbjct: 670 EMLK 673 >UniRef50_Q21DZ3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21DZ3_SACD2 Length = 682 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 96/443 (21%), Positives = 193/443 (43%), Gaps = 31/443 (6%) Query: 221 RSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEE 280 R A D TGL NR + + +E + G + +++ L DF ++DT GH +E Sbjct: 243 RFRAFHDNLTGLPNRALLNERFGLCIEHARRCGNKFVCLLLDLDDFKTINDTKGHDYGDE 302 Query: 281 QFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPNNK 339 + L + L+ R +F L T +A IA ++ A+ + Sbjct: 303 LLIGVAQRLKASVR--AEDLVCRLGGDEFIILATDIETEFDARQIANNILFAL----SED 356 Query: 340 MLDRDDMIH----IGICAWRSGQDTEQVME-HAESATRNAGLQGGNSWAIYDDSLPEKGR 394 ++ +DD I IG + +T V++ HA+ A +A G N ++++ + E+ Sbjct: 357 IVIKDDKIKTAVSIGGAIYPQHGETVGVLKRHADVAMYHAKDGGKNRFSLFSHGMQEE-- 414 Query: 395 GNVRWRTLIEQMLS----RGGPRLYQKPAVTRE-GQVHHRELMCRIFDGNEE--VSSAEY 447 V +R +I++ L +Y +P V E G+V E + R + EE ++ ++ Sbjct: 415 --VHYRLMIQRDLEPAILDNQLIIYFQPKVLAETGEVAGCEALVR-WQHPEEGFLTPDKF 471 Query: 448 MPMVLQFGLSEEYDRLQISRLIPLLRYWPEE-----NLAIQVTVESLIRPRFQRWLRDTL 502 +P + L E D I L+ W +A+ ++ + L++ + Sbjct: 472 IPYAEETPLIREIDYYVIRECCKKLKEWAARFDKPVPIAVNLSGRHFRSFKIVEVLKEAV 531 Query: 503 MQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELN 562 S + IE+ EA + + Q V+ + ++G ++++ G S ++++ L Sbjct: 532 ASAGISP-DLLEIEITEAVLIADPDKAQKVVHAIKSIGFTISLDDFGTGYSSLNYLRTLP 590 Query: 563 VELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGG 622 ++++KL + NI+ +++ L + + G + A GV + S+ QTL+ G Sbjct: 591 IDIIKLDRSFIANIDTSEQDRRLTRGITSLAKGLDLTMVAEGVETESQLQTLLDLGCHCF 650 Query: 623 QGDFFASSQPLDTNVKKYSQRYS 645 QG +F+ P +T + ++Y+ Sbjct: 651 QGYYFSKPVP-ETEFLAWHKKYN 672 >UniRef50_C5D2S1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacillus RepID=C5D2S1_GEOSW Length = 676 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 101/464 (21%), Positives = 197/464 (42%), Gaps = 34/464 (7%) Query: 197 SALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHG 256 + LD ++ ++N E+ + + +R A D TG+ NR +F+ + L+E Q T Sbjct: 227 NELDYVIVTVKNIGER-KKYEEKLRQLAYFDSLTGIANRSYFERYIKQLIESQ----TDF 281 Query: 257 IVMMIRLPDFNMLSDTWGHSQ----VEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAAL 312 + + F ++D + H ++E + ++L T AR +F L Sbjct: 282 ALCYLDFDKFKWINDHFSHQAGDYFLQEAVRRVQSVLRT------EDFFARIGGDEFVLL 335 Query: 313 LPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQD-TEQVMEHAESAT 371 LP+ T +E +A +L++ + + +GI + D EQVM++A+ A Sbjct: 336 LPNITKEEVTKLADELVQTFHKPFYYEKQLIQSTLSMGIAFFPKDSDRIEQVMKYADQAL 395 Query: 372 RNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHREL 431 N +G N + Y P + R + + L +L YQ G E Sbjct: 396 YNVKKRGKNGYEFYR---PTQNRKAIIEQDLPFAILREQFYLCYQPKIKLDSGATMGVET 452 Query: 432 MCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW----PEENLAIQVTV 486 + R + E+ +++P+ Q G E + ++ W P LA+ ++ Sbjct: 453 LLRWRHPSLGEIPPLDFIPLAEQSGFIFEITLWVLEHSCRQVKEWQTQFPGLKLAVNLSP 512 Query: 487 ESLIRPRFQRW----LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVR 542 L R + LRDT E +I+E+ E+ + ++ + ++ + +GV+ Sbjct: 513 FLLNRTELVQHIVHILRDTHFAPE-----HLILEVTESGLMENFETGKHILTQLKNIGVQ 567 Query: 543 VAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYA 602 VA++ G S ++I+ L V LLK+ ++ I + +++ +V +++ QV A Sbjct: 568 VAIDDFGTGFSSLAYIRNLPVSLLKIDRSFIQGIAENSKDATIVDTIIHLAKSLDIQVLA 627 Query: 603 TGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV 646 GV + + L Q QG +F+ S + ++K+ + Y V Sbjct: 628 EGVETYHQVALLQQMDCDFAQGFYFSKSLEAE-KLQKWLEEYMV 670 >UniRef50_Q47EJ7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EJ7_DECAR Length = 695 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 120/503 (23%), Positives = 217/503 (43%), Gaps = 35/503 (6%) Query: 136 TTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRT 195 TA + + +M FL VR Q L QE A L + + E RT Sbjct: 194 VTAAVVLVFAALYLMQFLVVRRAQGILEDQEGRIKAARDTLEIQVAART-----EELKRT 248 Query: 196 SSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTH 255 +S L+ EI R+ S+L+ L A D TGL NR F +L L + E+ G Sbjct: 249 NSQLEG---EISERRQAQSKLNYL----AYHDPLTGLANRRCFIERLEESLSEGERHGEK 301 Query: 256 GIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL-P 314 V+ I L F ++D+ GH +E ++ LS + +LAR +F L+ Sbjct: 302 LAVLYIDLDQFKQVNDSLGHGVGDELLVSVAARLSEHVRLID--MLARLGGDEFICLMEA 359 Query: 315 HRTLKEAESIAGQLIKAVD---TLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESAT 371 R+ E E +A ++I A + L ++++ + I +C G +M +A++A Sbjct: 360 ARSEDEVELLAREIIAAFEYPFKLGDHELF-LTASVGISLCP-SDGNSVLDLMRNADTAM 417 Query: 372 RNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRE 430 A + G ++ Y + + + ++ L+ + L G ++ +P V +R GQ+ E Sbjct: 418 YRAKMLGRGNFHFYTAEMTREAQERIQMENLLRRALDNGELSVHLQPQVDSRSGQLVGAE 477 Query: 431 LMCRIFDGNE--EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW-------PEENLA 481 + R ++ E +V ++P+ GL + W P+ ++ Sbjct: 478 ALVR-WNSPELGQVMPIRFIPLAEDSGLIIGLGNWVLRETCRQFMQWRMSGFELPQ--VS 534 Query: 482 IQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGV 541 + ++V+ L RP F L D ++ + +EL E+ V P+ RL + LG+ Sbjct: 535 VNLSVKQLERPEFIDVL-DKILDETGMDPTLLKLELTESVVMAVGDAFTPLERLRD-LGI 592 Query: 542 RVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVY 601 +A++ G S S++K L V+ LK+ V I + + ++ ++++++E +V Sbjct: 593 SLALDDFGTGYSSLSYLKMLPVQQLKIDRSFVEGIGRNSGDEAIIRTIMELARSLGFEVV 652 Query: 602 ATGVRSRSEWQTLIQRGVTGGQG 624 A GV + + L G QG Sbjct: 653 AEGVETVEQANFLADLGCEQLQG 675 >UniRef50_B8GPR3 Signal transduction protein n=2 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPR3_THISH Length = 571 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 112/465 (24%), Positives = 190/465 (40%), Gaps = 42/465 (9%) Query: 194 RTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVG 253 R + A+D LR+ R Q+ + I A D TGL NR F+ +L L + Sbjct: 117 RLAPAIDRELRD-HEVRRQNRQAQEAINHLALHDSLTGLINRHGFETRLKEALAKARRQR 175 Query: 254 THGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL 313 + + I L F +++DT GH ++ L +LL + + LAR +F LL Sbjct: 176 PSAL-LYIDLDQFKLVNDTCGHQAGDDLLRQLASLLQIPVREHD--TLARLGGDEFGVLL 232 Query: 314 PHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDT-----EQVMEHAE 368 TL++AE +A +++ V+ + + IG + D VM HA+ Sbjct: 233 DECTLEQAEQVARRMLSIVNDF---RYTWGEHNFRIGASIGLTLLDDPDLSLSDVMRHAD 289 Query: 369 SATRNAGLQGGNSWAIY--DDSLPEKGRGNVRWRTLIEQMLSRGGPRLY-QKPAVTREGQ 425 A A +G N ++ DD ++W I + L + LY Q+ + Sbjct: 290 MACYAAKDKGRNRVHLFREDDRTLMARHSEMQWTARINEALEQDRFLLYYQEIHPLKPDT 349 Query: 426 VHHRELMCRIFDGNEEVSSA-EYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQV 484 H E++ R+ D + EV S ++P ++ L DR + +P +R E QV Sbjct: 350 AGHCEILLRMLDPSGEVISPWAFIPAAERYNLMPTVDRKVLELTLPRIRQLLREG---QV 406 Query: 485 TVESLIRPRFQRW--------LRDTLMQCEKSQRKR--------IIIELAEADVGQHISR 528 P+ RW L D ++R R + E+ E V ++ Sbjct: 407 -------PKGYRWFINLSGLTLGDDAFLAHVTERLREHAIPPEALGFEITETAVIANLGN 459 Query: 529 LQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQS 588 I+ + LG VA++ G L S S++ + + +K+ G VR++ + +Q +V++ Sbjct: 460 AVRFIQRMRDLGCHVALDDFGTGLSSFSYLSNIPADYIKIDGGFVRDMHENEMHQAIVEA 519 Query: 589 LVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 + + A V + Q L Q GV QG A +PL Sbjct: 520 INRIGHVAGLRTIAEFVETEGVRQRLAQLGVDYAQGYGIARPRPL 564 >UniRef50_C5SC92 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SC92_CHRVI Length = 1124 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 98/429 (22%), Positives = 182/429 (42%), Gaps = 32/429 (7%) Query: 223 YAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQF 282 +A D TGL NR +L L ++ G ++ I L F +++D+ GH +E Sbjct: 535 HAIHDPLTGLPNRTMIHERLERALRRSKQQGQSVALLFIDLDGFKLVNDSHGHQAGDELL 594 Query: 283 FTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAG------QLIKAVDTLP 336 T+ L + PG + R +F L H ++ ++A L++ TL Sbjct: 595 KTVAQRLVDHVR--PGDTIGRLGGDEFVVLCDH--VESPAAVANLADRLNDLLREPVTLS 650 Query: 337 NNKMLDRDDM-IHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRG 395 ++ + + IG S D ++ +A++A A QG + W + + + E+ R Sbjct: 651 GRRLFASASIGLAIGHGTTHSADD---LLRNADAAMYQAKEQGRDGWRFFSEEIHEQARR 707 Query: 396 NVRWRTLIEQMLSRGGPRLYQKPAVTREGQV-HHRELMCRIFDGNEEVSSAEYMPMVLQF 454 + + Q + R ++ +P + + Q+ EL+ R F EVS A ++P+ Sbjct: 708 RLDIINGLRQAIERDEFQVRFQPILCAQSQIIRGAELLLRWFPSGGEVSPAHFIPIAEMS 767 Query: 455 GLSEEYDRLQISRLIPLLRYWPEE----------NL-AIQVTVESLIRPRFQRWLRDTLM 503 G + + R W + N+ A Q+ E+L+ F+R L +T Sbjct: 768 GSIVPIGKWVFRQACLAERQWRDRFGVEAPYVSVNVSARQLNDEALVE-EFRRMLAET-- 824 Query: 504 QCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNV 563 + +RI++EL E + + V+ + LG+RVAV+ G S + + L + Sbjct: 825 ---GADPERILLELTETSLMSDVIFNLSVLNQLAGLGLRVAVDDFGTGYSSLAQLLRLPL 881 Query: 564 ELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQ 623 LK+ V ++KR +++ +V ++ + +V A GV + S++ L G Q Sbjct: 882 SKLKIDREFVDGLDKRHDSRAIVHAVCSMARAMNLKVIAEGVENASQFGYLRDLGCDYVQ 941 Query: 624 GDFFASSQP 632 G F P Sbjct: 942 GFHFYRPLP 950 >UniRef50_Q6LLM3 Hipothetical sensory box/GGDEF family protein n=4 Tax=Vibrionaceae RepID=Q6LLM3_PHOPR Length = 1052 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 114/468 (24%), Positives = 204/468 (43%), Gaps = 33/468 (7%) Query: 195 TSSALDTLL--REIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKV 252 T S L LL +I + RE +L+ A D TGL NR +F+ QL +L + + Sbjct: 592 TQSKLQLLLVGEDITSTRELEEKLEY----QACHDYLTGLFNRNYFETQLENVLVEAREH 647 Query: 253 GTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAAL 312 T + I L F +++DT GH +E + LL + A L+R +FA + Sbjct: 648 ETRHAMFYIDLDQFKVINDTAGHEAGDEALKQVALLLQEITPEH--ATLSRLGGDEFAII 705 Query: 313 LPHRTLKEAESIAGQ---LIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAES 369 L H T EA + + L++ + + + I + +G +QV A++ Sbjct: 706 LRHCTQHEAVTFGDEILHLLEGAEFFWQSTRFSFSCSLGIRLIDETAGS-PQQVHAQADT 764 Query: 370 ATRNAGLQGGNSWAIY--DDSLPEKGRGNVRWRTLIEQMLSRGGPRLY-QKPAVTREGQV 426 A A +G N +Y DD ++ + + I + L+ L+ Q+ A G Sbjct: 765 ACYAAKDEGRNRLHLYHPDDEELKRRELEMEYVNHIHKALAEQRFELHAQQIAPVASGST 824 Query: 427 -HHRELMCRIFDGNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPE-----EN 479 H E++ R+ + + VS +MP ++ ++ DR + +I L+ E E Sbjct: 825 KQHYEILVRMRNSDGSMVSPGLFMPAAERYNIAHLIDRYVVKGVIEWLQANKEAVEKLEL 884 Query: 480 LAIQVTVESLIRPRFQRWL----RDTLMQCEKSQRKRIIIELAE-ADVGQHISRLQPVIR 534 +I ++ +S+ F +L RD+ + K + +E+ E A +G +Q + Sbjct: 885 CSINLSGQSMGNRDFVGFLIEQIRDSGLPPSK-----LCLEITETAAIGNMSEAIQLFTQ 939 Query: 535 LVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACS 594 L N LG +A++ G L S ++K + V+++K+ VR+I + + +V+++ E Sbjct: 940 LKN-LGCLIALDDFGSGLSSFGYLKRMPVDIIKIDGMFVRDIAEDEMDFAMVKAINELAK 998 Query: 595 GTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 + A V + + L GV QG F +PL V + SQ Sbjct: 999 KMGKRTVAEFVENEAILMRLQSLGVDYAQGYLFGKPKPLAELVAELSQ 1046 >UniRef50_C6XBN5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBN5_METSD Length = 782 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 94/417 (22%), Positives = 166/417 (39%), Gaps = 20/417 (4%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A D+ TGL NRL F ++L L + ++ I + F ++D+ GH +E Sbjct: 345 AHHDILTGLPNRLLFQDRLTHALALSARNNNRVGMLFIDIDHFKNINDSLGHVIGDELLV 404 Query: 284 TLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDT---LPNNK 339 + L + AR +F L+ + EA +IA L++A+ T L N Sbjct: 405 AIVERLKLRIREQDT--FARLGGDEFVLLIEQLQNASEAATIASNLLEALKTPFHLSGNC 462 Query: 340 MLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRW 399 + I I +C QD Q++ +A+SA A G N + Y + L ++ + + Sbjct: 463 EVVISASIGISVCP-EDTQDATQLIRNADSAMYRAKDTGRNRYQFYTEELTQRAQERLMT 521 Query: 400 RTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIF-----DGNEEVSSAEYMPMVLQ 453 + + Q + L+ +P T+ E C D + ++P + Sbjct: 522 ESRLRQAIRDKAFVLHYQPIYTKGEDGGAPSIFSCECLIRWQQDDGSLIYPDLFIPCAEE 581 Query: 454 FGLSEEYDRLQISRLIPLLRYW----PEENL--AIQVTVESLIRPRFQRWLRDTLMQCEK 507 GL + L W P+ L A+ ++ F + + L + Sbjct: 582 TGLIIPIGEWVLDHACAQLAEWDARLPDNTLSMAVNISARHFCDANFVMTVHEVLKR-HA 640 Query: 508 SQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLK 567 R+IIE+ E V + P + + GVR+A++ G S + +K L + LK Sbjct: 641 IAPARLIIEITENAVMDRMDIAIPTLETLVRTGVRIALDDFGTGHSSLAKLKTLPIHALK 700 Query: 568 LHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 + V++I T++ L S++ G Q A GV ++ ++ L Q G QG Sbjct: 701 IDREFVKDIPDSTDDMQLAASIIRMAQGLHLQTVAEGVETQEQYDFLAQAGCDKFQG 757 >UniRef50_A6SWF4 Sensory box protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SWF4_JANMA Length = 914 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 106/464 (22%), Positives = 197/464 (42%), Gaps = 26/464 (5%) Query: 186 GTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATL 245 G I++ R L R++ + + L L A +D T L NR + N L Sbjct: 448 GWIHKRMLRCEDGLAVTFRDVSDRKAHEEELHRL----ATKDTLTNLPNRYWLMNHLPKA 503 Query: 246 LEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYH 305 L + + V+ I L DF ++DT GHS + + + L + + PG + R Sbjct: 504 LNEANEKQDSLAVLFIDLDDFKNINDTLGHSSGDSLLQVVASRLESVLR--PGDSVVRLG 561 Query: 306 RSDFAALLPHRTLKEAESIAGQLIKAVDTLP---NNKMLDRDDMIHIGICAWRSGQDTEQ 362 +F LL L+E S+ I P KML + I + G+D E Sbjct: 562 GDEFTLLLESLPLQEDISLIANRIMQTFNQPFEIQQKMLTISASMGISRYPF-DGRDAET 620 Query: 363 VMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPR----LYQKP 418 ++++A+ A +A G N +YD L E+ + R E+ L+R +Y +P Sbjct: 621 LLKNADIAMYSAKADGKNKVRVYDKKLYEE----IELRVDGERQLARAIQEDHFIVYYQP 676 Query: 419 AV-TREGQVHHRELMCRIFDGNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP 476 V + G++ E + R ++ ++P+ G+ RL + ++ + W Sbjct: 677 RVEAQTGRMVGMEALVRWAHPERGLIAPDHFIPLAESTGMILPLGRLVMEKVFCQIAAWQ 736 Query: 477 EENLAI-QVTVESLIRPRFQRWLRDTLMQC--EKSQRKRII-IELAEADVGQHISRLQPV 532 + LA+ V+V R + + + + C + + R I IEL E+ + + +++ Sbjct: 737 FQKLAVVPVSVNVSARQFDEGNVSEFIASCLNKYAVDPRFIEIELTESAMMGNFEQVRGE 796 Query: 533 IRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEA 592 I ++ALG+++ V+ G S S + + N+++LK+ I ++ S+V Sbjct: 797 ISSISALGIQIHVDDFGTGYSSLSLLYKFNMDVLKVDRAFTSQICNGKGGEIFFSSIVSM 856 Query: 593 CSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTN 636 +V A GV + + + L Q G QG + S+P+ ++ Sbjct: 857 AKVLKMRVVAEGVETIEQLRVLQQLGCDEIQG--YLVSKPIPSS 898 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 92/433 (21%), Positives = 187/433 (43%), Gaps = 22/433 (5%) Query: 214 SRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTW 273 R++++IR A D T L NRL FD QLA L + ++ V + L F +++DT Sbjct: 425 KRVESIIRYQACHDALTHLPNRLLFDEQLALALANSKQQPELLGVAFLDLDRFKVVNDTL 484 Query: 274 GHSQVEEQFFTLTNLLSTFMMRYPGAL-----LARYHRSDFAALLPHRT-LKEAESIAGQ 327 GH ++ LL R L +AR+ +F L PH T E IA + Sbjct: 485 GHGIGDQ-------LLQQVATRLKQCLRNCDTIARWGGDEFTLLFPHLTSTDEITKIAHR 537 Query: 328 LIK--AVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIY 385 ++ ++ + +N+ L + I +C + +D + +++HA++A A QG N++ ++ Sbjct: 538 ILDKLSIPFVIDNQELYVTASLGIALCPY-DAEDAQTLLKHADAAMYRAKKQGRNNFQVF 596 Query: 386 DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCRIFDGN-EEVS 443 + + + + + + L + LY +P V G++ E + R V Sbjct: 597 AEEMHREALNQLTLEADLRRALIKEEFLLYYQPQVEISTGKIVGLEALIRWQHPTLGFVP 656 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-AIQVTVESLIRPRFQRWLRDTL 502 +++P+ + GL + + + W E L +++ V R Q L + + Sbjct: 657 PDQFIPLAEEIGLIAPIGQWVLQTACIQHQSWQAEGLPPVRIAVNLSARQFHQSQLINII 716 Query: 503 MQCEKSQR---KRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIK 559 +Q ++ + + +E+ E+ Q + ++ + +G+ + ++ G S + +K Sbjct: 717 LQTLETTEIDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITIDDFGTGYSSLNVLK 776 Query: 560 ELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGV 619 + LK+ V++I + + + + Q++V G +V A GV + + L Sbjct: 777 HFPLNTLKIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGVETPQQLSFLRSIHC 836 Query: 620 TGGQGDFFASSQP 632 QG +F P Sbjct: 837 DLAQGYYFCPPVP 849 >UniRef50_B9ZM78 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZM78_9GAMM Length = 961 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 100/429 (23%), Positives = 185/429 (43%), Gaps = 22/429 (5%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 IR A D TGL NR + L L+ G HG +++I L F ++D GH+ + Sbjct: 519 IRRLAYHDPLTGLANRTQLHDALTQDLDLAHHGGQHGGLILIDLDHFKTINDALGHAVGD 578 Query: 280 EQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL-PHRTLKEA--ESIAGQLIKAVDTLP 336 + + L AL+ R +FA L+ P R ++A ++ + +D L Sbjct: 579 TVLAAVADRLRQHAPEQ--ALVVRLGGDEFATLIHPRRASRQAIEATVNDAAHRLLDALQ 636 Query: 337 NNKMLDRDDMIHIGI---CAW--RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPE 391 + +L + +G C +GQ + + HA+ A A G Y +L + Sbjct: 637 HPIVLG-ERTFSVGASLGCVLFPDAGQTSSDALRHADIALYQAKRAGRGGVQFYRHALQD 695 Query: 392 KGRGNVRWRTLIEQMLSRGGPRL-YQKPAVTREGQVHHRELMCRIFDGNEEVSSAEYMPM 450 + R ++ + Q L RL YQ +E + L+ V A ++P+ Sbjct: 696 EARARLQIEEGLRQALVNREMRLSYQPQFDAQENMIGAEALLRWTHPELGPVGPALFIPI 755 Query: 451 VLQFGLSEEYDRLQISRLIPLLRYWPEENL------AIQVTVESLIRPRFQRWLRDTLMQ 504 + GL + ++ L+ W L AI ++ L RP F LR+ +Q Sbjct: 756 AEETGLIHPIGTWVVEHVLENLQDWHARGLPLPPRVAINISPWQLARPDFVAQLRER-VQ 814 Query: 505 CEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVE 564 + +I +E+ E+ + + +S +R + GV+VA++ G S +++++L ++ Sbjct: 815 AAGLEAGQITLEVTESGLLRDLSDAIGKLRALREFGVQVALDDFGTGYSSLAYLRDLPLD 874 Query: 565 LLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 LK+ + + + E Q+L++++++ +V A GV ++ Q L+ G T QG Sbjct: 875 ELKIDKSFIDELVDKGE-QMLIENILDIGHNMGLRVVAEGVAKPAQRQQLLALGCTHFQG 933 Query: 625 DFFASSQPL 633 F QP+ Sbjct: 934 --FLYGQPI 940 >UniRef50_A3WM41 Signaling protein with a ligand binding sensor domain, GGDEF and EAL domains n=2 Tax=Idiomarina RepID=A3WM41_9GAMM Length = 741 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 102/446 (22%), Positives = 191/446 (42%), Gaps = 27/446 (6%) Query: 205 EIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLP 264 E+ + ++ R++ I A D T L NR L+ L D K G I + I L Sbjct: 288 ELYSEIDERERVEKEIAYLAEHDALTRLINRNALMRILSEWLADDAKNGLTAI-LFIDLD 346 Query: 265 DFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPG-ALLARYHRSDFAALLPHRTLKE-AE 322 F ++D GH+ +E + + P A+LAR +F +PH T +E Sbjct: 347 RFKEVNDALGHTVGDELIKRVARRIKKLA---PNEAVLARSGGDEFLLAVPHSTSREHIL 403 Query: 323 SIAGQLIKAVDTLPNNKMLDRDDMI---HIGIC-AWRSGQDTEQVMEHAESATRNAGLQG 378 ++A QL++A+D + +D ++ IGI A + + E ++ +A++A A G Sbjct: 404 TLADQLLQALDA---HFYVDEYELFISASIGIAFAEDADNNPEYLIRNADTALYQAKDNG 460 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHR----ELMCR 434 N++ IY ++ + + + + +Y +P V G HR E + R Sbjct: 461 RNTYHIYSQAVHRDLAKKLEMVKQLRHAVEQEALEVYYQPKVELLG---HRITGLEALVR 517 Query: 435 -IFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE-----NLAIQVTVES 488 + D + +++P+ GL + L+ W E +AI ++ + Sbjct: 518 WVKDDGTVIGPDQFIPIAEDTGLIIPLSEYVMRTACNQLKRWHEMGFNDLTMAINISGKQ 577 Query: 489 LIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQA 548 L P + D + + S K I +EL E ++I + V G+ +A++ Sbjct: 578 LHLPDLVDTIVDNVSEARLSP-KCIELELTEQVFIENIQSHTNFMHSVREHGMSLAIDDF 636 Query: 549 GLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSR 608 G+ S S++K V LK+ VR++ ++ ++VQ+++ + Q+ A G+ + Sbjct: 637 GVGYSSLSYLKNFPVTSLKIDRSFVRDLPDNEDDAVIVQTIINLAKNLNIQLVAEGIETS 696 Query: 609 SEWQTLIQRGVTGGQGDFFASSQPLD 634 + + L+ R GQG F+ P D Sbjct: 697 EQVEFLLSRDCGIGQGYLFSRPVPAD 722 >UniRef50_Q2YC85 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YC85_NITMU Length = 951 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 98/426 (23%), Positives = 181/426 (42%), Gaps = 21/426 (4%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 +R A D TGL NR F+ +L +LE + H ++ + L F +++DT GH + Sbjct: 526 MRYQATHDALTGLINRHEFERRLKQVLERDKGADEH-TLLYLDLDQFKIVNDTCGHLAGD 584 Query: 280 EQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL---PHRTLKEAESIAGQLIKAVDTLP 336 E LT+LL + + LAR +F LL P + + Q ++ + Sbjct: 585 ELLKQLTSLLQAKLRK--DDTLARLGGDEFGLLLERCPRGSAFRVAEVLRQTVQEFRFVW 642 Query: 337 NNKMLDRDDMIHIGICAWRSGQDT-EQVMEHAESATRNAGLQGGNSWAIY--DDSLPEKG 393 ++ I IG+ + G+ T V+ A++A A +G N +Y DD EK Sbjct: 643 EERIFSLG--ISIGLATFSGGEQTFSDVLRMADTACFLAKDKGRNRVQLYASDDKNLEKR 700 Query: 394 RGNVRWRTLIEQMLSRGGPRLYQKP--AVTREGQVHHRELMCRIFDGNEE-VSSAEYMPM 450 RG + W + + L + LY + ++ H E++ R+ N E V ++P Sbjct: 701 RGEMGWVERLHKALDKQRFVLYSQKILPLSAPSSTSHYEILLRMKGENGELVPPMAFIPA 760 Query: 451 VLQFGLSEEYDRLQISRLIPLLRYWP----EENLAIQVTVESLIRPRFQRWLRDTLMQCE 506 ++GL + DR I+ P ++ I ++ S+ ++ D Q + Sbjct: 761 AERYGLMPQLDRWVITNAFAQYASHPSRGIKDTCTINLSGASICDEHLYDFVVDQFKQSQ 820 Query: 507 KSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELL 566 I E+ E ++++ +IR + LG R +++ G + S +++K L V+ L Sbjct: 821 IDPAG-ICFEITETVAIANLTQAATLIRKLKELGCRFSLDDFGSGMSSFTYLKHLLVDYL 879 Query: 567 KLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDF 626 K+ ++ + + +V+++ Q A V S + L + GV QG Sbjct: 880 KIDGAFIKGMLSDPIDHAMVEAINHIGHVMKIQTIAEWVEEESFLEALRKIGVDYAQG-- 937 Query: 627 FASSQP 632 +A +P Sbjct: 938 YAIEEP 943 >UniRef50_A6VUG3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VUG3_MARMS Length = 731 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 93/427 (21%), Positives = 188/427 (44%), Gaps = 18/427 (4%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 ++ A +D TGL NR F + L L + ++ + L +F ++DT GH + Sbjct: 299 LQELAYKDPLTGLPNRRFLQDSLPKTLHNNQRRKRISAFIYFDLDNFKRINDTIGHDVGD 358 Query: 280 EQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPNN 338 + + + L+ ++ L+ R +F LL K+A A ++++++ T Sbjct: 359 QVLIIVGDRLNK--LKAMSDLVVRLGGDEFGILLGDIGDEKQASEQANRILESIRT--PI 414 Query: 339 KMLDRDDMIH--IGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRG 395 KM R+ ++ +GI G D +M++A+ A A L+G N +A Y + + Sbjct: 415 KMDSREYILSTSLGIAMIPEHGYDLVTIMQNADMALYQAKLKGKNQYAFYTEKMKISTHN 474 Query: 396 NVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNEE--VSSAEYMPMVL 452 ++ + L R +Y +P R V E + R ++ E+ + +++P+ Sbjct: 475 LIKAEEDLTLALQRNEFEMYYQPQFNIRTNHVFGAEALIR-WNHPEKGVIFPNDFIPLAE 533 Query: 453 QFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEK 507 G E + I L +E L I + E L P F +++ L + + Sbjct: 534 STGKIVELGYWVLESSIAYLAKRKQEGRPDILLHINLASEQLSDPHFVALVQELLGKYQV 593 Query: 508 SQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLK 567 I E+ E + + I + +++ + +G+ +A++ G S S +K L V+LLK Sbjct: 594 PAH-LIGFEITETSILEDIHLARYLLQTLKDMGICIAIDDFGTGYSSLSQLKNLPVDLLK 652 Query: 568 LHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFF 627 + V ++E +++ +V++++ + +V A GV +R +W+ L GQG + Sbjct: 653 IDRSFVMDLENDPDDRKIVEAIIAMAHKLNIKVLAEGVETREQWKMLAAFQCDFGQGYYV 712 Query: 628 ASSQPLD 634 + + D Sbjct: 713 SKAVTAD 719 >UniRef50_C4I4I7 Sensory box/ggdef/eal domain protein n=36 Tax=Burkholderia RepID=C4I4I7_BURPS Length = 872 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 101/425 (23%), Positives = 182/425 (42%), Gaps = 21/425 (4%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQE--KVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQ 281 A DV TGL NR+ F+ +L L D K +++M+ L F ++DT GH+ + Sbjct: 447 ATHDVLTGLVNRVEFERRLEIALADTASGKERADSMLLMLDLDRFKEINDTCGHAAGDAM 506 Query: 282 FFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-----RTLKEAESIAGQLIKAVDTLP 336 +T + + +LAR +F LLPH + +AE + L V Sbjct: 507 LREVTQRFQSCL--DDDDVLARLGGDEFGVLLPHGAGSWPSKNKAERLRRSLEDFVFLWE 564 Query: 337 NNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGR-- 394 + + + +C ++ ++ E ++ A+ A A +G N + D S ++ R Sbjct: 565 GERFTVSVSIGVLELC--KAPRNLEMAVKLADIACYIAKERGRNRIQLADPSDLQQARHV 622 Query: 395 GNVRWRTLIEQMLSRGGPRLYQKPAV-TR-EGQVHHR-ELMCRIFD-GNEEVSSAEYMPM 450 G+V+W I+ L G RLY +P V TR + + R E++ R+ D ++S A ++P Sbjct: 623 GDVQWSRRIKTALENDGFRLYVQPIVHTRPDSRTPERAEVLLRMMDSAGRDISPAAFLPA 682 Query: 451 VLQFGLSEEYDRLQISRLIPLLRYWPE---ENLAIQVTVESLIRPRFQRWLRDTLMQCEK 507 ++GL DR I + L P + ++ S+ RF ++ L+ Sbjct: 683 AERYGLMGLIDRWVIRTVFRKLSALPAREYHEYNVNLSGASISDERFLEFVIAELLS-SG 741 Query: 508 SQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLK 567 + I E+ E +++ + + +G R A++ G + S +++ L ++ LK Sbjct: 742 LEPSVICFEITETIAVKNLELASRFMGELRTIGCRFALDDFGAGMSSFRYLRSLPIDYLK 801 Query: 568 LHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFF 627 + V N+ + +V ++ E A V S E L + G+ QG FF Sbjct: 802 IDGEFVSNMMSDRVSYGVVSAINEVAHSMRCSTVAEHVESEVELAMLRELGIDFCQGYFF 861 Query: 628 ASSQP 632 A P Sbjct: 862 AQPSP 866 >UniRef50_C6XA09 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=2 Tax=Methylophilaceae RepID=C6XA09_METSD Length = 782 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 89/413 (21%), Positives = 179/413 (43%), Gaps = 10/413 (2%) Query: 227 DVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLT 286 D TGL NR F +L L+ + H V+++ L F ++ GH+ ++ ++ Sbjct: 354 DELTGLPNRASFLRELGLALQQAQDQQEHLAVLVMNLNHFKQINKVLGHAAADDLLRSVA 413 Query: 287 NLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDM 346 L + +R L+AR +FA LLP + A +A L++ ++ N D Sbjct: 414 QRLQS-SIRQESDLVARLGGDEFALLLPRTGIANATHVANMLLQKLEAPINIANQSVDIS 472 Query: 347 IHIGI-CAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQ 405 + IGI C E+++ +AE A A + + ++D + +GN+ + + Q Sbjct: 473 MGIGIACYPEHASAQEKLLGNAEMAMHVAKAKQSGA-VLFDPAFDISSQGNLSLASELRQ 531 Query: 406 MLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNEEVS-SAEYMPMVLQFGLSEEYDRL 463 ++ LY +P + + G++ E + R + + +++P Q GL Sbjct: 532 AIATNELALYVQPKIDLQNGKISAVEALIRWRHPQKGLMFPDQFIPFAEQSGLISLISLW 591 Query: 464 QISRLIPLLRYWP----EENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAE 519 ++ + W + +A+ ++ LI + TL Q I +E+ E Sbjct: 592 VLAEAARVEVAWRKLGIDAPIAVNLSTRDLIDQDLPHKIL-TLHQDAGLALGGITLEITE 650 Query: 520 ADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKR 579 + + R Q + ++ +G++++++ G S +++K L V LK+ V +E+ Sbjct: 651 SSMMDDPQRAQQTLERLSDMGLQLSIDDFGTGYSSLAYLKRLPVSELKIDKSFVLKMEED 710 Query: 580 TENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQP 632 ++ +V+S ++ + +V A G+ SR+ W L G GQG + P Sbjct: 711 ENDRKIVRSTIDLGHNLNLKVVAEGIESRAAWDLLASMGCDFGQGYHISKPMP 763 >UniRef50_B8INP3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=2 Tax=Proteobacteria RepID=B8INP3_METNO Length = 794 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 98/448 (21%), Positives = 193/448 (43%), Gaps = 24/448 (5%) Query: 203 LREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIR 262 +R+++ R+ R+ L A D TGL NR F +L L+ E G V+ + Sbjct: 347 VRDLRARRQAEGRIQFL----AHHDALTGLANRTSFTQRLDLELKLAEATGRKLAVLCLD 402 Query: 263 LPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAE 322 L F ++D +GH+ + + +++ + ++AR +FA L A Sbjct: 403 LDRFKEVNDLFGHAAGDAMLVNVARVVTGILGET--QMMARLGGDEFAVLAACDHAITAG 460 Query: 323 SIAGQLIKAVDTLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNS 381 +A ++++A+ + N IGI + + + ++ HA++A A +G + Sbjct: 461 HLAERILEALRS-ENADAAGPLVATSIGIALYPDDASERDVLLSHADTALYRAKSEGRGT 519 Query: 382 WAIYDDSLPEKGRGNVRWRTLIEQML----SRGGPRLYQKPAVTRE-GQVHHRELMCRIF 436 + ++ + + VR R ++E L +RG L +P E G+V E++ R Sbjct: 520 YRFFEHKMGVQ----VRDRRILEHELRHAVARGEMHLVYQPQTQVETGEVIGFEVLLRWH 575 Query: 437 DGNE-EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE-NLAIQVTVESLIRPRF 494 VS A ++P+ + G + + + WP +A+ V+ + P F Sbjct: 576 HPERGAVSPAVFIPIAEESGAILQIGEWVLRQACRDAASWPNPLAVAVNVSAVQIHAPHF 635 Query: 495 QRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVS 554 + + + L+Q + R+ IE+ E + + R +R V ALGV +A++ G S Sbjct: 636 VQLVHEVLLQT-GLKPDRLEIEITETALIRDPVRALSTLRQVKALGVHIAMDDFGTGYSS 694 Query: 555 TSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTL 614 S ++ + +K+ P +R ++ + +V+S++ G V A GV + +E + L Sbjct: 695 LSNLRSFPFDKIKIDPSFIRAVDTNEQTAAIVRSVLGLGRGLGLPVLAEGVETDAELRFL 754 Query: 615 IQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 QG P ++++SQ Sbjct: 755 AAENCDAAQGYLMGRPAP----IERFSQ 778 >UniRef50_B9L207 Developmental regulator MorA n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L207_THERP Length = 897 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 108/490 (22%), Positives = 203/490 (41%), Gaps = 23/490 (4%) Query: 154 AVRWLQRQLAGQELL---ETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAR 210 A RWL QL G +L E R R N V P S ++ + +I + Sbjct: 418 AQRWLH-QLGGDGILAGTEFRWRRRDNRLIWVRVSARADHSPAGQSLVIEGTVEDISERK 476 Query: 211 EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLS 270 RL L R D TG+ NR L L + G G ++++ L F ++ Sbjct: 477 SVEERLAYLAR----HDTLTGIANRHALLETLQERLARAVRSGRSGALLLLDLDHFKEVN 532 Query: 271 DTWGHSQVEEQFFTLTN-LLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLI 329 D GH+ + + N L+ T L+AR +FAALL T + AE + +L+ Sbjct: 533 DRLGHAAGDAVLRAVANRLIGTLRS---DDLVARVGGDEFAALLHPVTREGAECVGRRLL 589 Query: 330 KAVD----TLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAI 384 + LP+ + R GI + G E+++ A+ A A +G + + Sbjct: 590 DVIGQIMVPLPDRVIRLRAS---CGIALFPEHGTTVEELLIAADRALYQAKYRGRDRLEV 646 Query: 385 YDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNEEVS 443 Y+ ++ E + ++++ L+ G L+ +P + R ++ EL+ R+ +G + Sbjct: 647 YEPAIAEPEQPRTAHLSIVQSALANGNLLLFAQPILDLRRERIAAYELLIRLREGERVLE 706 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLM 503 + P+ G+ ++D + R L + + V+ +L R LRD L Sbjct: 707 PGMFFPVTEGLGIVPQFDLWVLERACEL-NLTSRGRIHLNVSARTLREARHFAVLRDLLE 765 Query: 504 QCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNV 563 +C + R+ +++E+ E + ++ + G R+A++ G+ S ++ L + Sbjct: 766 RCPFAPRQ-LVLEVTETTALIDFVQAHEHLQRLRERGCRIALDDFGVGYSSLYQLRHLPI 824 Query: 564 ELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQ 623 + +K+ + ++ + NQ +V+++V + A V S L + GV Q Sbjct: 825 DFIKIDGMFIVDLAENPVNQSIVRAIVALARAVGAETIAGWVESAETLALLRELGVDHAQ 884 Query: 624 GDFFASSQPL 633 G +PL Sbjct: 885 GFAIGRPEPL 894 >UniRef50_C9QFQ1 Sensory box/GGDEF family protein n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QFQ1_VIBOR Length = 831 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 96/450 (21%), Positives = 196/450 (43%), Gaps = 22/450 (4%) Query: 205 EIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLP 264 + +N + +L+ L A D TGL NR +A +E VM + L Sbjct: 385 DFENLQSTKDQLEYL----ANHDELTGLPNRSLLHQHIANGIEMSAAQCCQLAVMFVDLD 440 Query: 265 DFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAES 323 DF ++D +GHS + + F+ P +AR+ +F + + L E ES Sbjct: 441 DFKKVNDLYGHSAGDRLLSEIGKKFDAFLG--PNDYVARFGGDEFIFCFSNLKNLSETES 498 Query: 324 IAGQLIKAVDTLPNNKMLDRDDMI---HIGICAWRS-GQDTEQVMEHAESATRNAGLQGG 379 Q IK V ++D + IG+ + S G D E+++ A+ + + Sbjct: 499 KVEQ-IKNV--FRQQFVIDGKVIFASCSIGVSMYPSDGDDPEELISKADIVLYKSKARQK 555 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG 438 +D S+ ++ + + + + + RG + +P V + G+++ E + R ++ Sbjct: 556 GDVLFFDSSINQQVQYDFLLERELREAIDRGELTVSYQPQVNAKTGELYGVESLLRWYNP 615 Query: 439 N-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIP-LLRYWPEEN----LAIQVTVESLIRP 492 +VS E++ + + GL I++ ++ +P + L+I ++ L+ Sbjct: 616 QLGQVSPLEFISLAEEIGLIGRIGEFVINKACEEFVQVFPSPDSELILSINISPMQLMYS 675 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 F + L+ ++ + +RI +E+ E + + ++ PVI V LG V+++ G Sbjct: 676 GFIQQLQ-SITDKHQLPSRRITLEITENVLINDLPKVAPVINQVKELGFTVSLDDFGTGY 734 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S S++ L ++ LK+ V + ++ LV++++ + +V A GV + ++ Sbjct: 735 SSLSYLSNLPLDELKIDRVFVDKMLSSEQSDSLVKAILAIARSANMRVVAEGVETEAQRA 794 Query: 613 TLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 LI+ G QG P+D +KY++ Sbjct: 795 VLIEYGCDLLQGYLIERPIPIDQLARKYAK 824 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 101/451 (22%), Positives = 195/451 (43%), Gaps = 32/451 (7%) Query: 213 HSRLDTLIRSYAAQDVKTGLNNR-LFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 H + IR A D TGL NR LF ++ ++L + + G V +I + F ++D Sbjct: 257 HHQAKQKIRQLAYFDGLTGLPNRQLFLEHCNSSLTQARRNRSPLG-VCIIDIDRFKGVND 315 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKA 331 T+G+ + T++ LS M R +LAR +FAA++ ++ S+ Q + Sbjct: 316 TYGYESGDALLKTVSQRLSDCMSRED--VLARLGSDEFAAVIASVGSQDEFSVLAQKMLH 373 Query: 332 VDTLP----NNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYD 386 T P K+ M GI + G D E ++++A +A A G N++ + Sbjct: 374 CLTEPIQIGEQKLYCSGGM---GIALFPVDGVDAEALLKNAATAMHQAKQHGSNNFRFF- 429 Query: 387 DSLPEKGRGNVRW-RTLIEQMLSRGGP----RLYQKPAVT-REGQVHHRELMCRIFDGNE 440 KG + W R IE L R L+ +P V + G + E + R ++ E Sbjct: 430 ----SKGMNRMAWERIEIETGLRRALDLQQLALHYQPQVDLKTGHIIGMEALLR-WESPE 484 Query: 441 --EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW-----PEENLAIQVTVESLIRPR 493 VS ++P+ + GL + + W P +A+ ++ + Sbjct: 485 LGRVSPMRFIPLAEETGLILPIGNWVLESACRQAKAWHRAGFPSLRMAVNISARQFKQAG 544 Query: 494 FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLV 553 F L D ++Q + + +EL E+ + + + + + G+++A++ G Sbjct: 545 FIDRL-DAIIQRSGINPELLEMELTESLIMEKSDETLMTLVDIKSRGIKLAIDDFGTGYS 603 Query: 554 STSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQT 613 S++K ++ +K+ VR+I + T++ + ++++ +V A G+ +R + Sbjct: 604 MLSYLKHFPIDRIKVDRSFVRDIPENTDDAAITEAIIAMAHSLKIEVIAEGIETREQLAF 663 Query: 614 LIQRGVTGGQGDFFASSQPLDTNVKKYSQRY 644 L R GQG +F P++T + +Q+Y Sbjct: 664 LKDRACEEGQGYYFGRPVPVETAAEILAQQY 694 >UniRef50_Q3SIU2 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SIU2_THIDA Length = 1012 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 99/452 (21%), Positives = 196/452 (43%), Gaps = 28/452 (6%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 +L+R++ +E ++ IRS A D TGL NR ++L E+ +G +M+ Sbjct: 564 SLVRDVTERKEVEAQ----IRSLAYFDSLTGLPNRRLLLDRLNQARLSSERTREYGALMI 619 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLP------ 314 + L F L+DT GH + + L+ + + + R +F +L Sbjct: 620 LDLDRFKTLNDTQGHDVGDRLLIDVARRLTASVRQ--NDTVCRLGGDEFVVVLEGFGSDE 677 Query: 315 HRTLKEAESIAGQLIKAVD---TLPNNKMLDRDDMIHIGICAWRSGQDT--EQVMEHAES 369 + + +AE+IA ++ A++ +L N +G+ + G D + +++ A+ Sbjct: 678 DQAVTQAEAIAEKVRAALNQPYSLSGNGS-RFHSTTSVGLTLF-CGHDATADMLLKQADV 735 Query: 370 ATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHR 429 A A G N ++ ++ + + Q L R +Y +P V + +V Sbjct: 736 ALYQAKDAGRNLVRFFNPAMQAAIDTRMAMEAALRQALERDEFHVYYQPQVDQRERVIGA 795 Query: 430 ELMCRIF-DGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE------NLAI 482 E + R GNE +S E++P+ + GL + + L+ W + +A+ Sbjct: 796 EALLRWRPQGNEAISPLEFIPLAEETGLILPIGKWVLDVACAQLKAWESDPRAAHLKIAV 855 Query: 483 QVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVR 542 V+ P F ++D+L + R+ +EL E+ V + I + + +NALGV Sbjct: 856 NVSARQFHEPDFVATVQDSLAR-SGVDPTRLQLELTESVVLEKIETVVSRMEELNALGVS 914 Query: 543 VAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYA 602 ++ G S S++K L ++ +K+ VR++ + + +VQ+++ V A Sbjct: 915 FCLDDFGTGYSSLSYLKRLPLDQVKIDQSFVRDVVDDSNDAAIVQAIMAMSRSLGLNVIA 974 Query: 603 TGVRSRSEWQTLIQRGVTGGQGDFFASSQPLD 634 GV + ++ L + + G QG F P++ Sbjct: 975 EGVETHAQRDFLAGKCL-GYQGFLFCEPIPIE 1005 >UniRef50_Q1NNT1 GGDEF:EAL n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NNT1_9DELT Length = 696 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 98/440 (22%), Positives = 196/440 (44%), Gaps = 23/440 (5%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 TLL + + +RL + +++ A D TGL NR FD+ DQEK+ ++++ Sbjct: 271 TLLIRAERENKTLNRLSSELKTTATTDRLTGLANRFAFDS-------DQEKL-QRPLLLL 322 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHR---SDFAALLPHRT 317 + + DF ++D +G S + +L LL + P + AR +R DF +L Sbjct: 323 LNIDDFRHINDLYGTSTGDYVLASLAGLLQD-NLPTPASAWARCYRLGGDDFGIMLDEPA 381 Query: 318 LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQ 377 E +A +L+ +L N+ + D I I I S Q ++E+A+ A + Sbjct: 382 DFNPEELANKLLS---SLHENEYIYHDQPIRISISIGISRQ--RPLLENADLALKEIKKH 436 Query: 378 GGNSWAIYDDSLP--EKGRGNVRWRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCR 434 + +Y D L E+ N+ + Q L R +Y +P + R GQ E + R Sbjct: 437 KRFRYLLYSDELKLQERIAANLEILQTVRQALDRDNILVYYQPIIDNRSGQTSKYECLVR 496 Query: 435 IFDGNEEVSSAEY-MPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPR 493 + + + S Y + +V + L E + +++ + ++ ++V ++ Sbjct: 497 LRNAEGAILSPGYFLDVVKESPLYPEITKQVVAKSFAEMA-GCHCGFSLNLSVADILDTE 555 Query: 494 FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLV 553 + ++ T++ + +R+ E+ E + +++ ++ I V A G ++AV+ G Sbjct: 556 VRDYIL-TMIAAQPETARRLTFEILENEGMENVEVVRGFIDQVKAAGCQIAVDDFGSGYS 614 Query: 554 STSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQT 613 + + I L V++LK+ L+RN++ + ++LV ++V+ C + A V S T Sbjct: 615 NFAHILTLKVDILKIDASLIRNLDDDPQARILVHTIVDFCRKLGIKTVAEFVHSAPVHHT 674 Query: 614 LIQRGVTGGQGDFFASSQPL 633 + + + QG + P Sbjct: 675 VKEMEIDYSQGFYLGEPGPF 694 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 97/447 (21%), Positives = 197/447 (44%), Gaps = 26/447 (5%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 LL EI + R ++ A D TGL NRL + +L L D + V+ I Sbjct: 486 LLVEINERKMAEER----VKHMALHDALTGLPNRLLLEERLENALSDAKSHQWQLAVLFI 541 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGA--LLARYHRSDFAALLPHRTLK 319 L F +++DT GH + ++ + N L + GA +AR +F +L + Sbjct: 542 DLDRFKLVNDTLGHHEGDQLLVEVANRLHQVI----GANDTVARLGGDEFVIVL--NEIA 595 Query: 320 EAESIAGQLIKAVDTLPNNKMLDRDDMI---HIGICAW-RSGQDTEQVMEHAESATRNAG 375 + I G + L DM IG+ + G+ Q+M++A++A +A Sbjct: 596 GSTEINGVIEDIQQNFKPAVKLALQDMFVTPSIGVAIYPEDGETPVQLMKNADAAMYHAK 655 Query: 376 LQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCR 434 G N ++ SL + + + + Q L G LY +P + + ++ E + R Sbjct: 656 ASGRNCAQYFNRSLDDSLKERISLENALNQALKLGQFELYYQPQLDVKSNRIIGAEALIR 715 Query: 435 IFDGNEE--VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPE---ENLAIQVTVESL 489 ++ E+ +S ++P+ + GL + + + L W + + L++ V + +L Sbjct: 716 -WNHPEKGMISPDAFIPLAEESGLIVDIGSWVLHQASSQLAQWRKQGFDQLSVSVNLSAL 774 Query: 490 I--RPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQ 547 + F R + D + + + + +EL E+ + ++ + ++ LG++++V+ Sbjct: 775 QVQKESFAREVADVIREYGVPE-ACLDLELTESMIMRNAEETIAALDKIHNLGIQISVDD 833 Query: 548 AGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRS 607 G S S++K ++ LK+ V++I T++ ++ ++++ + QV A GV + Sbjct: 834 FGTGYSSLSYLKRFPLDKLKIDRSFVQDITVDTDDAMICKTIISMAHNLNLQVIAEGVET 893 Query: 608 RSEWQTLIQRGVTGGQGDFFASSQPLD 634 ++ + L G QG FA P++ Sbjct: 894 NAQLELLRDYGCEQYQGYLFAKPLPVE 920 >UniRef50_C6PPB4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PPB4_9CLOT Length = 973 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 95/449 (21%), Positives = 203/449 (45%), Gaps = 32/449 (7%) Query: 199 LDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIV 258 ++ ++ +I + +EQ + IR A D T L NR +L +LED +G + Sbjct: 528 INGIVLDITSIKEQ----EEYIRYIAYHDSLTNLPNR----RKLMEILEDDISKNKYGAL 579 Query: 259 MMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL-PHRT 317 M++ L +F ++DT GH ++ ++ L ++ ++R+ +F L+ + Sbjct: 580 MLLDLDNFKGINDTLGHLYGDKVLKKVSEKLQ--YIKDEKMFISRFGGDEFLILIQDEKD 637 Query: 318 LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHI----GICAWR-SGQDTEQVMEHAESATR 372 + E+ A Q+I NK++ I++ G+ + Q++ +A+ A Sbjct: 638 IAIIENYANQIINVF----KNKLVIEGQEIYLSCSMGVTLYPFDSNKVSQLLMNADMAMY 693 Query: 373 NAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPR-LYQKPAVTREGQVHHREL 431 +G N++ +++ + EK + ++ ++ + + + LYQ T G+V E Sbjct: 694 KVKNKGKNNYMFFNEEMTEKLQEKIKVEGILRDAIKKEKLKLLYQPQVCTFTGKVVGFEA 753 Query: 432 MCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTV 486 + R+ D + +S A+++P+ + GL E R + + W ++ L +I + Sbjct: 754 LLRLKD--KHISPAQFIPVAEETGLIIEIGRWVTKEAVNQINRWKKKGLDIKPISINFSP 811 Query: 487 ESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVN 546 + L + +L +TL + + K I IE+ E+ + + I + +LG++++++ Sbjct: 812 KQLNDLNYIEFLENTLKEVS-VEAKYIEIEITESIFLEEKEKNIAFINRLKSLGIKISLD 870 Query: 547 QAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVR 606 G S +++ L V+ +KL L EN ++ SL+ + +V A G+ Sbjct: 871 DFGTGYSSLNYLTFLPVDKIKLDKSLNDKF-LEFENVKVIDSLIFLAKSLNLEVIAEGIE 929 Query: 607 SRSEWQTLIQRGVTGGQGDFFASSQPLDT 635 ++++ L G QG F S+PL+ Sbjct: 930 DVAQYKRLKSAGCHYIQGYLF--SKPLEV 956 >UniRef50_C0QQR2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Persephonella marina EX-H1 RepID=C0QQR2_PERMH Length = 687 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 76/429 (17%), Positives = 194/429 (45%), Gaps = 25/429 (5%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 ++ + D TG+ NR +NQ+ +L++ + I++ + + +F ++DT+GH+ + Sbjct: 260 LKRFIRYDYLTGIFNRFALENQIKEMLKNSPE-DAKNILIFMDIDNFKEINDTFGHNVGD 318 Query: 280 EQFFTLTNLLSTFMMRYPG----ALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDT- 334 +L F R ++ R +F + R + S+ + ++ + + Sbjct: 319 L-------VLRIFAKRLKNTVKEGIVGRLGGDEFLIFIQDRGRLDINSLLDKWMRVLSSS 371 Query: 335 --LPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK 392 L NN ++D + I + G D ++++ ++ A QG N + I++D + K Sbjct: 372 YKLKNN-IIDISVTAGVSIHEGKRG-DFYKLLKESDIALYYGKKQGKNMFIIFNDQIKIK 429 Query: 393 GRGNVRWRTLIEQMLSRGGPRLYQKPA--VTREGQVHHRELMCRIFDGNEEVSSAEYMPM 450 ++ L++ L + L +P + E V L+ E + ++++P+ Sbjct: 430 EEKRIKLTNLMKHALEKKEFYLVYQPIYDINTEKIVSVEALLRWKNAEGEHIPPSDFIPI 489 Query: 451 VLQFGLSEEYDRLQISRLIPLLRYW-----PEENLAIQVTVESLIRPRFQRWLRDTLMQC 505 + + GL +E R I + L+ W + +++ + ++ ++ F + + ++++ Sbjct: 490 LEETGLIKEVGRWVIEEVCKQLKRWNSLGIKDITISVNIDIQQILEENFVKTV-ESIISK 548 Query: 506 EKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVEL 565 E + E+ E++ + + ++ +N++G+ ++++ G S S++K + V Sbjct: 549 ECKTFSSLKFEITESEAMKFPETVIQTLKNLNSIGIEISIDDFGTGYSSLSYLKTMPVAY 608 Query: 566 LKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGD 625 +K+ ++++ + ++++L +++VE +V A GV + + L + QG Sbjct: 609 IKIDRSFIKDLPEDKDDRILTKAIVELSKNFGYKVIAEGVETEEQLIYLKEIKCDMVQGF 668 Query: 626 FFASSQPLD 634 +F P D Sbjct: 669 YFCRPLPAD 677 >UniRef50_Q12JD4 Diguanylate cyclase/phosphodiesterase n=2 Tax=Shewanella RepID=Q12JD4_SHEDO Length = 755 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 100/444 (22%), Positives = 183/444 (41%), Gaps = 39/444 (8%) Query: 215 RLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWG 274 RL + ++ DV TGL NR+ F+ L L+D + + V + L F +++D G Sbjct: 306 RLADELSFHSNHDVLTGLPNRVQFELLLDEALKDPD--SANACVAFLDLDQFQVINDVSG 363 Query: 275 HSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDT 334 H +E + L + + G ++AR +F L+ T + A +A ++ + Sbjct: 364 HQAGDELLCQVAKRLKLLLRK--GDVVARLGGDEFGILMYSATQESATLVAKRICLQLSE 421 Query: 335 LPNN-KMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK 392 + + + + +G+ ++ D V+ +++ R A +G N W Y P+ Sbjct: 422 HEFQWRKVKHNVSVSMGLAKLDKNAGDIYTVLSQIDASCRLAKEEGRNQWHFYSKDDPQI 481 Query: 393 GRGNVRWRTLIEQMLSR----GGPRL------YQ--KPAVTREGQVHHRELMCRIFDGNE 440 + L QML+ G L YQ +P + +H L+ + Sbjct: 482 SK-------LYNQMLASVDITGALALDEFELFYQLIEPLEKADTGLHMEVLLRMVQKDGS 534 Query: 441 EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLA---------IQVTVESLIR 491 VS A ++P ++ L+ DR I L+ W NLA I ++ SL Sbjct: 535 YVSPAIFLPAAERYNLASRIDRWVIDNLLK----WGANNLATWQQLTMVSINLSALSLGD 590 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 +F WL LM E ++ E+ E + + +I L+ LG ++A++ G Sbjct: 591 QKFMSWLEMRLM-VEPELVDKLCFEITETAAVSQLDQATALIDLLQPLGCKLALDDFGSG 649 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S +++K L+V+ +K+ V N+ + ++ +V ++ + +V A V S Sbjct: 650 FSSFAYLKCLDVDFVKIDGQFVVNLCQDKSDKAIVAAICQLGKDMEFEVIAEFVESVEVG 709 Query: 612 QTLIQRGVTGGQGDFFASSQPLDT 635 L GV QG A Q L + Sbjct: 710 YLLKNLGVDYAQGYAIAKPQRLSS 733 >UniRef50_B1LTA1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1LTA1_METRJ Length = 801 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 99/436 (22%), Positives = 182/436 (41%), Gaps = 19/436 (4%) Query: 205 EIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLP 264 + +RE +R+ L A D TGL NR F + L TL + + L Sbjct: 336 DTTESREAQARIAFL----AGHDSLTGLPNRSGFQDALGTLCRAVRTAERPSALFYLDLD 391 Query: 265 DFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESI 324 F ++D+ GH + +T L + P +L R +FA ++ AE++ Sbjct: 392 GFKAVNDSRGHLVGDRLLRAVTARL--LAIGEPHSLF-RLGGDEFAMVVRDLGRPAAEAL 448 Query: 325 AGQLIKAVDTLPNNKMLDRDDM---IHIGICAWRSGQDTE--QVMEHAESATRNAGLQGG 379 A +++ L +D + + +GI A+ E ++ A+ A A G Sbjct: 449 AARVVA---ELRRPFQIDEARLEVGVSVGI-AYMPDDAVEPASLLMRADLALYAAKADGK 504 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFD- 437 W +D SL E+ ++ + L+ G L+ +P V R G+V E + R Sbjct: 505 GCWRTFDPSLEERVVRQRQFDLDMRAALAAGEMELHYQPLVDMRSGRVAGFEALLRWNKP 564 Query: 438 GNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRW 497 G VS E +P+ G E R + R R W + +A+ ++ + P F Sbjct: 565 GYGWVSPGEIIPIAETTGFIVEIGRWALRRACTDARTWSDLKIAVNISSIHVRMPGFHAE 624 Query: 498 LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 + L + + R+ IE+ E+ + H + ++ + A GVR+A++ G S S+ Sbjct: 625 VAAVLRETGLAP-DRLEIEITESVLLDHGPEVLENLKRLRATGVRIALDDFGTGYSSLSY 683 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 + E + +K+ VR+++ R E +V+++ S V GV +R + L + Sbjct: 684 LTEFPFDKVKVDRSFVRDLQGRPEKVAVVEAIARMARALSMSVTVEGVETRQQLDVLRDK 743 Query: 618 GVTGGQGDFFASSQPL 633 QG ++ ++P+ Sbjct: 744 RCDIAQGFLYSPARPV 759 >UniRef50_B9ZQW5 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZQW5_9GAMM Length = 635 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 91/415 (21%), Positives = 170/415 (40%), Gaps = 8/415 (1%) Query: 210 REQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNML 269 +E+ SRL+ L DV TGL NR F + LE++ G+ G +++R+ L Sbjct: 221 QEESSRLERLKNRLQHDDV-TGLLNRESFLARFQATLENRHS-GSAGSFVVLRVSSLPEL 278 Query: 270 SDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLI 329 + GH +++ + + + R SD A + ++ A L+ Sbjct: 279 NQAIGHDKLDALLARIAGVAEQQVSVTDYGAAGRLKGSDVAVF--GDGIGDSRRFAESLL 336 Query: 330 KAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSL 389 A+ D +H+ + T +V+ + A A L+ G+S A ++ Sbjct: 337 TAIRAELGPAAPDMM-ALHLAGTPYHPDDSTGEVLSRVDQALARAELEPGDSIAEEPHAV 395 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEEVSSAEYMP 449 N WRT I L+ G +L + P + + ++ H E R+ E + +MP Sbjct: 396 LPHANQN-EWRTAITVALATHGVQLARFPVIDADHELMHHEAPMRLLLDGESRPAGYFMP 454 Query: 450 MVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQ 509 ++ L + D + + LR E LAI ++V+SL F++ L ++ + + Sbjct: 455 WAVRLDLIRQLDDAVLETALEQLRS-SSERLAINLSVDSLQDTGFRQRL-ESRLASDPEV 512 Query: 510 RKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLH 569 R+ +E H + L+ + R+ G V + AG + + + +KL Sbjct: 513 AGRLWLEFPARGALAHPAELRDLCRIARVTGFVVGLEHAGPEAFRSHDLTAYGLHYVKLQ 572 Query: 570 PGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 L++ + + TE Q L++ L V A G S + + L++ G+ G G Sbjct: 573 ASLIQGVHRSTETQALIRGLCTLAHSIGILVVAEGCDSTDDIEPLMELGIDGVTG 627 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 98/436 (22%), Positives = 180/436 (41%), Gaps = 31/436 (7%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHS--- 276 IR+ A D T L NR ++L L + G V+ + + F L+DT GH Sbjct: 696 IRNLAFYDALTRLPNRRLLLDRLHAALSVSARSRRFGAVLFLDMDRFKTLNDTMGHDYGD 755 Query: 277 ----QVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL------PHRTLKEAESIAG 326 +V E+ + T +AR +F L+ T K +IA Sbjct: 756 LLLIEVAERIKLCVREIDT---------VARLGGDEFVILVEEIDTRAEETSKHIAAIAE 806 Query: 327 QLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQD-TEQVMEHAESATRNAGLQGGNSWAIY 385 ++ A+ K IG+C +R ++ T+ +++HA+ A A G N+ + Sbjct: 807 KIRSALSVPYRLKEKHHHSSPSIGVCLYRGIEESTDDLLKHADMAMYQAKDSGRNAVRFF 866 Query: 386 DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCR-IFDGNEEVSS 444 D + + V + L +LY + V + + E + R I VS Sbjct: 867 DPLMQQAVEARVTLENDLRHALPNDQLQLYYQIQVDNDRRAIGAEALVRWIHPIRGMVSP 926 Query: 445 AEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN------LAIQVTVESLIRPRFQRWL 498 A ++P+ + L E + L W + LA+ V+V+ + F + Sbjct: 927 AHFIPIAEETSLILEVGAWVLKTACLQLAVWADRPMTCNLILAVNVSVQQFKQVGFVEHI 986 Query: 499 RDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWI 558 + L++ +R+ +EL E+ V +S + + + +LGVR++++ G S S++ Sbjct: 987 AE-LIRAYCIVPQRLKLELTESVVLNDVSDIVQKMCALKSLGVRLSMDDFGTGYSSLSYL 1045 Query: 559 KELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRG 618 K L ++ LK+ VRNI + ++V++++ V A GV + ++ L Q G Sbjct: 1046 KNLPLDQLKIDQSFVRNIATDENDAVMVKTIIAMAQNFRLNVIAEGVETEAQLAFLKQNG 1105 Query: 619 VTGGQGDFFASSQPLD 634 QG +F P++ Sbjct: 1106 CMCYQGYYFGKPAPIE 1121 >UniRef50_Q5QW01 Intracellular signaling protein (GAF,PAS,GGDEF,EAL domains) n=1 Tax=Idiomarina loihiensis RepID=Q5QW01_IDILO Length = 766 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 93/421 (22%), Positives = 183/421 (43%), Gaps = 19/421 (4%) Query: 223 YAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQF 282 + + D T L NR + +L L E++ V+ I L F ++D+ GH +E Sbjct: 338 FTSHDSLTHLVNRSAMEQRLQQLQENKSDAAI--FVLFIDLDGFKPINDSLGHYLGDEVL 395 Query: 283 FTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIKAVDTLPNNKML 341 L ++ P LL R+ +F A++ + +++ ++ +++ + + Sbjct: 396 IETAQRLQQ-VVSEPN-LLCRFGGDEFVAVIQDMSAVEQVNALCAEVLAVFEQPFRIGEV 453 Query: 342 DRDDMIHIGICAWRSGQDTE-----QVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGN 396 + IG+ S D E ++ + A+ A A +GGNS Y +L E Sbjct: 454 EVSLSAAIGV----SANDIEFKHPMELTQRADVAMYEAKKRGGNSVYWYSANLDEGLGYK 509 Query: 397 VRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEE-VSSAEYMPMVLQFG 455 V RT I++ L++ L+ +P +T +GQV E + R + VS A+++P+ + G Sbjct: 510 VALRTKIQEALAQEQFELFYQPIMTDKGQVAGAEALIRWQHPTKGYVSPADFIPVAERTG 569 Query: 456 LS---EEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKR 512 E+ Q R + L+ + +++++ + R F + L Q + + Sbjct: 570 QIIPISEWVLKQACRDLQQLKLYGIKSVSVNFSPIQFYREDFVSKTKAILEQFD-IKPGE 628 Query: 513 IIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGL 572 I +E+ E + R+ +++ + LG+ VA++ G S ++ L V LK+ Sbjct: 629 ITVEITENVLVNDTQRIAELLQQLRDLGLDVAIDDFGSGFASLRYLNMLPVNKLKIDRSF 688 Query: 573 VRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQP 632 + NI + + N + ++ +G + A GV E L++ G QG F+ +P Sbjct: 689 IENIHENSHNAAITCGILSMVAGIGIETVAEGVEKEEECAYLVEHGCHFMQGFLFSKPKP 748 Query: 633 L 633 L Sbjct: 749 L 749 >UniRef50_Q15YI2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15YI2_PSEA6 Length = 608 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 113/468 (24%), Positives = 197/468 (42%), Gaps = 56/468 (11%) Query: 201 TLLREIQN--AREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIV 258 L+ EI N A E+ RL T QDV TGL NR + L +LL + ++ G +G V Sbjct: 149 NLVDEISNRKAVEEQLRLQTY------QDVLTGLPNRKMLNINLQSLLTNAQQHGQYGAV 202 Query: 259 MMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL 318 I L F +++DT GHS +E +T+ L + R LAR +F LL Sbjct: 203 FFIDLDRFKLINDTLGHSVGDELLINITSKLKACIRR--DDTLARVGGDEFILLLGDIGP 260 Query: 319 KEAESIAGQLIKAVDTLPNNKMLDRDDM----------IHIGICAWRS---------GQD 359 E +S G+ K D + + L RD + IGI + S + Sbjct: 261 TE-QSAVGKATKVADKMLS---LTRDSIELSRCAVFTSFSIGIALFPSPELNANKSIAEQ 316 Query: 360 TEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQ----MLSRGGPRLY 415 +Q+++HA+ A N + Y L + +R+ +EQ L LY Sbjct: 317 AKQLIKHADIAMYKIKHTSRNDYLFYRHEL----QIMATFRSEVEQRLHVALREEAFELY 372 Query: 416 QKPAVTREGQVHHRELMCRIFDGNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPL--- 471 +P V G++ E + R D V E++P+ + GL E + + + L Sbjct: 373 FQPMVNVAGEIVAAEGLLRWHDEKLGWVGPQEFIPVAEECGLIVEIGQWVLRQTCVLISQ 432 Query: 472 -LRYWPEENL---AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHIS 527 L ++ E NL +I ++ +P F + + + + + +E+ E G + Sbjct: 433 HLDWFSEGNLRYISINISPRQFSQPHFVAQVLEIIEEF-TFPHSYLRLEITE---GVAME 488 Query: 528 RLQPVIRLVNALGVR---VAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQL 584 + I ++NAL V ++ G S S++ +L ++ +K+ V I++ T+NQ+ Sbjct: 489 NITSAIYIMNALIVHELFFMLDDFGSGYSSLSYLHQLPLKSVKIDRSFVSKIDQNTDNQV 548 Query: 585 LVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQP 632 +V++++ S + G+ + E ++ V QG F P Sbjct: 549 IVEAIIYISQHFSLECVVEGLETSQEHAYFHEKDVAAIQGFHFYKPLP 596 >UniRef50_B9JAE4 GGDEF family protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JAE4_AGRRK Length = 738 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 96/427 (22%), Positives = 182/427 (42%), Gaps = 20/427 (4%) Query: 217 DTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHS 276 + L R + +D +GL NR + L++ G++ +++ + L F ++D +GH Sbjct: 297 EALARQGSLRDRLSGLLNREGLRLDVDRLVDSARADGSNVLLLYLDLDGFKEINDAYGHG 356 Query: 277 QVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAV-DTL 335 ++ ++ L+ + P A LAR +FA P R L A ++ +L + V D L Sbjct: 357 TGDQLIRSVAAGLNVLIP--PNATLARLGGDEFAIAFPSRELNHAPAL--RLAEQVLDFL 412 Query: 336 PNNKMLDRDDMI---HIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYDDSLP- 390 + R ++ IGI + G+ D E+++ A+ A A G Y+ ++ Sbjct: 413 SEPLEIGRRVIVVGASIGIASSPEGRIDREELVRRADLAMYKAKEAGRARMICYETAMDT 472 Query: 391 ---EKGRGNVRWRTLIE-QMLSRGGPRLYQKPAVTREGQVHHRELMCR-IFDGNEEVSSA 445 E+ + R I+ Q L+ YQ + E + R G VS Sbjct: 473 DREERNALELDLRNAIDRQELTVA----YQPLVDAVSHDITGVEALVRWNRPGYGPVSPD 528 Query: 446 EYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQC 505 ++P+ GL E L + + R WP+ +A+ V+ P F ++R L Sbjct: 529 AFIPIAETSGLIEALGLLVLRKACAAARQWPDLRIAVNVSPGQFRNPAFADYVRHVLKDA 588 Query: 506 EKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVEL 565 E + +R+ +E+ E + Q+ R + I + LGV+VA++ G S ++++ + Sbjct: 589 E-IEAERVTLEITEGYMIQNPERTRQSIERLKKLGVKVALDDFGSGFSSIGYLRQFGFDR 647 Query: 566 LKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGD 625 +K+ L ++ + ++ ++Q+ V V A G+ + + L G QG Sbjct: 648 IKIDRSLTMDVLTDSRSRDMLQATVALARSLDLPVTAEGIETEEQGTALKLFGCDELQGY 707 Query: 626 FFASSQP 632 FF P Sbjct: 708 FFGKPMP 714 >UniRef50_B9M6C9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M6C9_GEOSF Length = 845 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 100/468 (21%), Positives = 198/468 (42%), Gaps = 44/468 (9%) Query: 182 SNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQ 241 +NV+G+I+ ++R++ ++ +++ IR A D+ TGL NR+ F + Sbjct: 396 NNVMGSIH------------IVRDVTESK----KMEDEIRYQATHDILTGLANRMLFMDH 439 Query: 242 LATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALL 301 LA + + VM + L F ++D+ GH+ ++ ++ L + + Sbjct: 440 LALSISQGHRYNEIQAVMFLDLDRFKSINDSLGHAAGDKLLQLISGRLKECVRETD--TV 497 Query: 302 ARYHRSDFAALLPHRTLKE-AESIAGQLIKAVDTLPNNKMLDRDD-----MIHIGICAWR 355 AR ++ L+ E A +IA +++ ++ NK D I IGI + Sbjct: 498 ARIGGDEYNILITQMAHPEDATAIANKILSSM-----NKPFAIDGHQLHVTISIGISLYP 552 Query: 356 S-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGG-PR 413 + G+D E ++++A+ A +A QG N++ Y+ +L + V+ + Q L R Sbjct: 553 TDGEDAETLLKNADIALYHAKEQGRNNYQFYNPALNTRTLERVKMENRLRQALERHELVV 612 Query: 414 LYQKPAVTREGQVHHRELMCRIFDGNEE---VSSAEYMPMVLQFGLSEEYDRLQISRLIP 470 LYQ GQV E + ++ + E +S ++PM + G + D + Sbjct: 613 LYQPQVAMDTGQVTGAEAL--VYWLHPELGLLSPGHFIPMAEEIGFITDIDEWVLETACA 670 Query: 471 LLRYWPEE-----NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQH 525 + W +E N+ + ++ + RP +R L R + +E+ E + Sbjct: 671 QNKAWQDEGYRSFNVTVNMSSKQFRRPDLVDQVRRVLNATGLPPR-FLELEITEGTAMKD 729 Query: 526 ISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLL 585 I P + + + V A++ G S S +K+L + LK+ + + ++ + Sbjct: 730 IEYTIPSLNTLTGMEVGFAIDDFGTGYSSLSCLKKLPIRKLKIDKSFIFGVNTDPNDKAI 789 Query: 586 VQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 V +++ +V A GV + + L Q QG F S+P+ Sbjct: 790 VATIIAMAHNLKLEVIAEGVEDADQLEFLHQNHCDQMQG--FLYSRPI 835 >UniRef50_A0LUU6 Diguanylate cyclase/phosphodiesterase with GAF sensor n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LUU6_ACIC1 Length = 746 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 98/422 (23%), Positives = 181/422 (42%), Gaps = 15/422 (3%) Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A D TGL +R F ++L L + GT+ ++ I L F +++DT GH+ + Sbjct: 310 AFHDSLTGLASRALFLDRLNLGLAQAARSGTNLCLLFIDLDRFKIVNDTLGHAAGDVLLV 369 Query: 284 TLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDR 343 + N L + + A ARY +F ALL ++ A +A ++I AV +D Sbjct: 370 EIANRLRSCLRASDTA--ARYGGDEFVALLHDTDVRGAAIVAARIIDAVRQPLRVGEMDV 427 Query: 344 DDMIHIGI-CAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTL 402 IGI C+ G + ++ A+ A A G +AIY+ S+ + T Sbjct: 428 TVDASIGIACSVAGGTAADDLLRSADVAMYRAKRAGRGRYAIYEPSMHAALLEQLHLETE 487 Query: 403 IEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNEE-VSSAEYMPMVLQFGLSEEY 460 + L RG ++ +P V G + E + R +++AE++P+ G E Sbjct: 488 LRGALHRGEFVVHYQPIVELATGDILGAEALLRWNHPRRGLLTAAEFVPIAEDCGEMVEI 547 Query: 461 DRLQISRLIPLLRYWPEE------NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRII 514 + R W E +++ V+ L F +L++ L + ++ Sbjct: 548 GSWVLRTACAQARAWQRELGEAPFTISVNVSTAQLAGDTFAGYLKEVLENTGLAATS-LV 606 Query: 515 IELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVR 574 +++ EA V + L + + LGV +AV+ G S + + L ++++K+ + Sbjct: 607 LDITEALVLREEPWLLARLEELKLLGVSLAVDDFGARYSSLAGLPRLPLDMVKIDQAFID 666 Query: 575 NIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLD 634 + E + +VE QV A GV+++ +++ L + QG FA +P+D Sbjct: 667 AVGT-PEGSAFARKIVELAHTLDLQVIAEGVQTQQQFEELRRARCEFAQGYLFA--EPVD 723 Query: 635 TN 636 T+ Sbjct: 724 TD 725 >UniRef50_C6C4P4 Diguanylate cyclase/phosphodiesterase with MHYT sensor n=1 Tax=Dickeya dadantii Ech703 RepID=C6C4P4_DICDC Length = 678 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 90/441 (20%), Positives = 189/441 (42%), Gaps = 18/441 (4%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 L ++ A +Q +RL A D TGL NR+ + +L + L + +M + Sbjct: 238 LTDSLRQANDQLARL-------AMHDALTGLPNRMQLERELESCLHHARQHRQTFALMYM 290 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA 321 L F +++D WGH ++ +T L ++ PG LAR +F L+ ++A Sbjct: 291 DLDGFKIVNDAWGHYLGDQLLAGVTTRLREYL--GPGMTLARIGGDEFVLLMRDCGEEQA 348 Query: 322 ESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGN 380 ++A +L++A++ + + +GI + R G + + +A++A + G N Sbjct: 349 AALADKLVQAIEQPFHQSGYTLRVTLSVGISLFPRDGATSHDLRLNADTAMYSIKQTGRN 408 Query: 381 SWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCRIFDGN 439 W Y S G + + L+ RL+ +P G +H E + R Sbjct: 409 GWIFYSPSFSHHGNHQPELLQALPKALALNQFRLWYQPKYRPPNGPIHGFEALIRWQHPQ 468 Query: 440 EEVSSAE-YMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPR 493 + + + ++PM + GL I+ L+ W ++ +AI ++ + Sbjct: 469 KGLLLPDKFLPMAEKTGLIIAIGEWVINEACRQLQVWHQQGQVHWTVAINISPVQFDQHN 528 Query: 494 FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLV 553 + D L + + + +E+ E+ +++ + ++ ++ LGV+V+++ G Sbjct: 529 LVSVISDALAKYQIPPYM-LTLEITESVAMRNLEKSLNILHELDRLGVKVSIDDFGTGYS 587 Query: 554 STSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQT 613 + ++ L LK+ V+++ +N ++V +++E + +V A GV + + + Sbjct: 588 NLLSLRRLPARELKIDRTFVKDLLLHNKNAVVVTTIIEMARSMNLEVVAEGVETPEQQEL 647 Query: 614 LIQRGVTGGQGDFFASSQPLD 634 L + G QG A P D Sbjct: 648 LTRLGCYSLQGFLLAPPMPPD 668 >UniRef50_A1SSA6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SSA6_PSYIN Length = 980 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 83/425 (19%), Positives = 189/425 (44%), Gaps = 15/425 (3%) Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 +++ A D TGL NR +++ L + +M + L F ++DT GH + Sbjct: 549 LQALANFDQLTGLPNRFMLKDKITYLFTLARRNNESLTMMFLDLDHFKNVNDTLGHVIGD 608 Query: 280 EQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNK 339 + L + + L++R +F L P+ A +IA +LI+ V +LP Sbjct: 609 RLLIEIAKRLKSAIREVD--LVSRIGSDEFILLFPNTDADSALNIATKLIETV-SLPT-- 663 Query: 340 MLDRDDMI---HIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRG 395 + + ++ IGI + G++ E ++++A++A A N++ + + + + Sbjct: 664 VFEHHELFITATIGIAIYPNDGEEFETLIKNADTAMSQAKRYSRNTFHFFTEEMQVHLQR 723 Query: 396 NVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQ 453 ++ + L R +++ +P ++ +G + E + R ++S E++P+ Sbjct: 724 KLKIVNAMRHALLRNEMQVHYQPQISAVKGHIIGAEALLRWRHPELGDISPGEFIPIAES 783 Query: 454 FGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRW----LRDTLMQCEKSQ 509 G + I ++ W E LA V +L +F++ + +++ + Sbjct: 784 SGQIVAIGEWVLRTAIDQMKVWQNEGLAPMVVAVNLSALQFKQANLIGMIISMLNKAQLA 843 Query: 510 RKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLH 569 + + +EL EA + ++ ++A G+R++++ G S S++K+ V LK+ Sbjct: 844 HQYLELELTEAITMDDPQQAINIMNQLHAKGIRMSIDDFGTGYSSLSYLKQFKVYKLKID 903 Query: 570 PGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFAS 629 + N+ + ++++ +V ++++ Q A GV + + + L G QG +F+ Sbjct: 904 QSFICNLARDSDDRAMVHAIIDMAKNLGMQTIAEGVETAEQLEFLRLHGCNEIQGYYFSK 963 Query: 630 SQPLD 634 + P D Sbjct: 964 AIPAD 968 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P13518 Uncharacterized protein yhdA n=154 Tax=Enterobac... 733 0.0 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 617 e-175 UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curviba... 588 e-166 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 587 e-166 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 585 e-165 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 584 e-165 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 583 e-165 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 578 e-163 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 578 e-163 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 577 e-163 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 577 e-163 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 575 e-162 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 575 e-162 UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 575 e-162 UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 574 e-162 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 574 e-162 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 573 e-162 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 573 e-162 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 573 e-162 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 573 e-162 UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 572 e-161 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 572 e-161 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 571 e-161 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 571 e-161 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 570 e-161 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 570 e-161 UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=ce... 570 e-161 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 570 e-161 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 570 e-161 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 570 e-161 UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/P... 570 e-161 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 569 e-160 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 568 e-160 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 568 e-160 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 568 e-160 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 568 e-160 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 567 e-160 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 567 e-160 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 567 e-160 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 567 e-160 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 567 e-160 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 566 e-160 UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/P... 566 e-160 UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/P... 566 e-159 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 565 e-159 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 565 e-159 UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 565 e-159 UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 563 e-159 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 563 e-159 UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylat... 563 e-159 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 561 e-158 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 561 e-158 UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsul... 560 e-158 UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/P... 560 e-158 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 560 e-158 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 559 e-157 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 559 e-157 UniRef50_C6X8Z9 Diguanylate cyclase/phosphodiesterase with PAS/P... 558 e-157 UniRef50_C6WW34 Response regulator receiver modulated diguanylat... 558 e-157 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 558 e-157 UniRef50_Q3SIU2 Putative diguanylate cyclase/phosphodiesterase (... 558 e-157 UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/P... 557 e-157 UniRef50_B9M6C9 Response regulator receiver modulated diguanylat... 557 e-157 UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/P... 557 e-157 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 555 e-156 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 555 e-156 UniRef50_Q1H2A5 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 555 e-156 UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 555 e-156 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 555 e-156 UniRef50_B8GQW3 Signal transduction protein containing a membran... 555 e-156 UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 554 e-156 UniRef50_A1SZV0 Response regulator receiver modulated diguanylat... 554 e-156 UniRef50_A1T0Y1 Response regulator receiver modulated diguanylat... 554 e-156 UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 554 e-156 UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/P... 553 e-156 UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n... 553 e-156 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 553 e-155 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 552 e-155 UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus... 552 e-155 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 552 e-155 UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellula... 552 e-155 UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/P... 552 e-155 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 550 e-155 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 550 e-155 UniRef50_B3PC21 Sensory box protein n=1 Tax=Cellvibrio japonicus... 548 e-154 UniRef50_Q0AAU4 Response regulator receiver modulated diguanylat... 548 e-154 UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/P... 548 e-154 UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 548 e-154 UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Ba... 547 e-154 UniRef50_C4ZNV7 Diguanylate cyclase/phosphodiesterase with PAS/P... 547 e-154 UniRef50_B5ED91 Diguanylate cyclase/phosphodiesterase n=3 Tax=Ge... 547 e-154 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 547 e-154 UniRef50_B4B5G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 547 e-154 UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 546 e-154 UniRef50_A1KBA9 Conserved hypothetical signaling protein n=1 Tax... 545 e-153 UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/P... 545 e-153 UniRef50_C1DB08 Predicted signal transduction protein containing... 545 e-153 UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuni... 545 e-153 UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 544 e-153 UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 543 e-153 UniRef50_A8UR98 Sensory box/GGDEF family protein n=1 Tax=Hydroge... 543 e-153 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 543 e-153 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 543 e-153 UniRef50_C4KCC9 Response regulator receiver modulated diguanylat... 543 e-152 UniRef50_C0QA93 Signal transduction family protein (GGDEF domain... 542 e-152 UniRef50_Q21RL1 Periplasmic sensor diguanylate cyclase/phosphodi... 541 e-152 UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/P... 541 e-152 UniRef50_Q3IEZ9 Putative uncharacterized protein n=2 Tax=Pseudoa... 540 e-152 UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsul... 540 e-152 UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling p... 540 e-152 UniRef50_B9MED7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Di... 540 e-152 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 540 e-152 Sequences not found previously or not previously below threshold: UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 597 e-169 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 586 e-165 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 582 e-164 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 578 e-163 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 578 e-163 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 577 e-163 UniRef50_A8FYM5 Signal transduction protein containing a membran... 575 e-162 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 573 e-162 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 573 e-162 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 573 e-162 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 573 e-162 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 572 e-161 UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 572 e-161 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 571 e-161 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 571 e-161 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 570 e-161 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 570 e-161 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 568 e-160 UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA a... 568 e-160 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 568 e-160 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 567 e-160 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 567 e-160 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 566 e-160 UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfuro... 566 e-160 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 566 e-159 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 565 e-159 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 565 e-159 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 565 e-159 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 564 e-159 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 564 e-159 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 564 e-159 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 564 e-159 UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacter... 563 e-159 UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/P... 563 e-158 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 563 e-158 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 563 e-158 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 562 e-158 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 562 e-158 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 562 e-158 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 562 e-158 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 562 e-158 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 562 e-158 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 561 e-158 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 560 e-158 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 560 e-158 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 560 e-158 UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/P... 559 e-157 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 559 e-157 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 559 e-157 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 558 e-157 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 558 e-157 UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/P... 558 e-157 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 557 e-157 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 557 e-157 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 557 e-157 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 557 e-157 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 557 e-157 UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 556 e-157 UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 556 e-157 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 556 e-156 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 556 e-156 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 555 e-156 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 555 e-156 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 555 e-156 UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 555 e-156 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 554 e-156 UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/P... 554 e-156 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 553 e-156 UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/P... 553 e-156 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 553 e-156 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 553 e-156 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 553 e-156 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 552 e-155 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 552 e-155 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 552 e-155 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 552 e-155 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 552 e-155 UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 551 e-155 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 551 e-155 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 551 e-155 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 550 e-155 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 550 e-155 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 550 e-155 UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/P... 550 e-155 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 550 e-155 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 550 e-155 UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC 549 e-155 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 549 e-155 UniRef50_Q2SG37 Predicted signal transduction protein containing... 549 e-154 UniRef50_A1AMG1 Response regulator receiver modulated diguanylat... 548 e-154 UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/P... 548 e-154 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 548 e-154 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 548 e-154 UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter... 548 e-154 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 548 e-154 UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH 547 e-154 UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Cauloba... 547 e-154 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 547 e-154 UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID... 547 e-154 UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 546 e-154 UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 546 e-153 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 546 e-153 UniRef50_Q9I310 Uncharacterized signaling protein PA1727 n=74 Ta... 546 e-153 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 545 e-153 UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 545 e-153 UniRef50_Q1N453 Predicted signal transduction protein containing... 545 e-153 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 545 e-153 UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/P... 543 e-153 UniRef50_Q220B0 Response regulator receiver modulated diguanylat... 543 e-153 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 543 e-153 UniRef50_Q2SF23 Predicted signal transduction protein containing... 543 e-153 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 543 e-153 UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extra... 543 e-153 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 543 e-153 UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 543 e-153 UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 T... 543 e-153 UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 542 e-152 UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 542 e-152 UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/P... 542 e-152 UniRef50_C7RVM5 Response regulator receiver modulated diguanylat... 542 e-152 UniRef50_C5V567 Diguanylate cyclase/phosphodiesterase with PAS/P... 542 e-152 UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 542 e-152 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 542 e-152 UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pe... 542 e-152 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 542 e-152 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 542 e-152 UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/P... 541 e-152 UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 541 e-152 UniRef50_C0QDV9 GGDEF domain family protein n=1 Tax=Desulfobacte... 541 e-152 UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira b... 541 e-152 UniRef50_C4KD26 Response regulator receiver modulated diguanylat... 540 e-152 UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/P... 540 e-152 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 540 e-152 UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 540 e-152 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 540 e-152 UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax... 540 e-152 UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 540 e-152 UniRef50_B8HRI7 Response regulator receiver modulated diguanylat... 540 e-151 >UniRef50_P13518 Uncharacterized protein yhdA n=154 Tax=Enterobacteriaceae RepID=YHDA_ECOLI Length = 646 Score = 733 bits (1893), Expect = 0.0, Method: Composition-based stats. Identities = 646/646 (100%), Positives = 646/646 (100%) Query: 1 MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFSV 60 MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFSV Sbjct: 1 MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFSV 60 Query: 61 LRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLR 120 LRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLR Sbjct: 61 LRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLR 120 Query: 121 LVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGER 180 LVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGER Sbjct: 121 LVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGER 180 Query: 181 GSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDN 240 GSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDN Sbjct: 181 GSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDN 240 Query: 241 QLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGAL 300 QLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGAL Sbjct: 241 QLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGAL 300 Query: 301 LARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDT 360 LARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDT Sbjct: 301 LARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDT 360 Query: 361 EQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV 420 EQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV Sbjct: 361 EQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV 420 Query: 421 TREGQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL 480 TREGQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL Sbjct: 421 TREGQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL 480 Query: 481 AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALG 540 AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALG Sbjct: 481 AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALG 540 Query: 541 VRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQV 600 VRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQV Sbjct: 541 VRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQV 600 Query: 601 YATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV 646 YATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV Sbjct: 601 YATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV 646 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 617 bits (1592), Expect = e-175, Method: Composition-based stats. Identities = 94/475 (19%), Positives = 200/475 (42%), Gaps = 14/475 (2%) Query: 177 NGERGSNVLGTIYEWPPRTSSALDT--LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNN 234 N SN L + + S ALD L + Q + R++ ++R A D T L N Sbjct: 467 NQNLESNNLSLLTGFAQLASIALDNANLYQAAQQELAERKRIEEILRYLAYHDSLTELPN 526 Query: 235 RLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMM 294 R F+++L+ L + VM + L F ++DT GH ++ + S + Sbjct: 527 RTLFNDRLSMALNQAHRNKNKLAVMFLDLDHFKKVNDTLGHDIGDQLLKGIAQRFSKLLR 586 Query: 295 RYPGALLARYHRSDFAALLPHRTLKE-AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICA 353 + G +AR +F LL + T E A +A ++I + + IGI Sbjct: 587 K--GDTIARIGGDEFTILLHNITRAENASIVADKIIDTLANPWIIGNHEFHITTSIGIAL 644 Query: 354 WRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGP 412 + G D E ++++A++A A G N++ Y ++ + + + L R Sbjct: 645 YPDDGTDAESLLKNADAAMYQAKEMGRNNYQFYTPTMNAQTLRRFELENNLRRALDRKEF 704 Query: 413 RLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIP 470 +Y +P V G++ E + R +S AE++PM + GL + R Sbjct: 705 VIYYQPQVEIHTGKIVGVEALIRWQHPQRGMISPAEFIPMAEETGLIIPIGEWILRRACA 764 Query: 471 LLRYWPEENLA-----IQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQH 525 + W + + + ++ ++P +++ + L + + +E+ E+ + Sbjct: 765 QNKAWQDRGFSPMRVTVNLSARQFLQPHLPQYISNVLEDT-GLGPQWLELEITESLAMKD 823 Query: 526 ISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLL 585 ++ + + + +G+ +A++ G S +++K L +++LK+ + ++ +++ + Sbjct: 824 VAFTEKTLIELRKMGITLAIDDFGTGYSSLNYLKRLPIDILKIDRSFIHDLNTESDDVAI 883 Query: 586 VQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 + +++ +V A GV ++ + L Q+ QG F P+ +KY Sbjct: 884 ISAIITLGHNLKMKVVAEGVETKEQLMFLRQQQCDLMQGYLFTKPLPVRELEQKY 938 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 597 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 91/452 (20%), Positives = 180/452 (39%), Gaps = 11/452 (2%) Query: 194 RTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVG 253 R L ++ + SR + IR A D TGL NR F+++L L ++ Sbjct: 166 RLMEDLRRHAAMLEEEVAERSRAEERIRQMAYYDSLTGLPNRRLFNDRLRQSLALAQRHK 225 Query: 254 THGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL 313 VM + L F +++DT GH+ + + L R G +AR +F L Sbjct: 226 RPLAVMFLDLDRFKLINDTLGHAVGDRLLMAVAKRLRNCCRRE-GDTVARQGGDEFIINL 284 Query: 314 PHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESAT 371 +K+A ++A ++I T + IGI + G+ + ++++A+ A Sbjct: 285 SAISDVKDAFTVAQKIIDVFRTPFVIDGYELFITTSIGISVYPHDGRSGDALVKNADVAM 344 Query: 372 RNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRE 430 A QG N+ ++ + + + + + L R L+ +P V E GQ+ E Sbjct: 345 YRAKEQGRNNCQLFAPEMNARAFERLSLENDMRRALERDEFVLHYQPKVNVEHGQIACME 404 Query: 431 LMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQV 484 + R + V + ++P+ + GL + R W + +A+ + Sbjct: 405 ALVRWQHPSMGLVPPSRFIPLAEETGLIVPLGEWVLRTACQQNRAWQDAGYPTMQVAVNL 464 Query: 485 TVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVA 544 + L + + L + ++IE+ E+ + R ++ +GVR++ Sbjct: 465 SPRQLRQGDLSETVARVLAET-GLAPGWLVIEVTESILMDDAEETIRTFRRLDRMGVRIS 523 Query: 545 VNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATG 604 ++ G S ++K+ V LK+ VR I +++ + +++ G + V A G Sbjct: 524 IDDFGTGYSSLHYLKKFPVHTLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLGVVAEG 583 Query: 605 VRSRSEWQTLIQRGVTGGQGDFFASSQPLDTN 636 V + + + L QG F+ P + Sbjct: 584 VETVEQMEVLRALNCRYMQGFLFSEPAPAEQF 615 >UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9D8_9BURK Length = 897 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 99/484 (20%), Positives = 189/484 (39%), Gaps = 25/484 (5%) Query: 172 ATRILNGERGSNVLGTIY----EWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQD 227 A+ +NG + + I P LR+I Q + + IR A D Sbjct: 411 ASAEVNGRHANGAIRPISVSASRIPHTEHDTFVVTLRDIT----QQRQDEEEIRRLAFYD 466 Query: 228 VKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTN 287 TGL NR +++ + + ++G HG +M + L F +L+DT GH +E + Sbjct: 467 PLTGLPNRRLLMDRVRQAMVNSARLGQHGALMFLDLDHFKLLNDTLGHDVGDELLQQVAY 526 Query: 288 LLSTFMMRYPGALLARYHRSDFAALLPHRT------LKEAESIAGQLIKAVDTLPNNKML 341 L + G +AR +F LL + +AE +A +++ A+ + + Sbjct: 527 RLRNCVRE--GDSVARLGGDEFVVLLEGLSDNRTDAANQAEVVAHKILDALALPYSLRGH 584 Query: 342 DRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWR 400 + IGI + + + +++ A+ A A G N+ +D + + Sbjct: 585 GYNSTPSIGIVVFMEDHETMDDLLKKADVAMYQAKAAGRNTARFFDPVMQAAVTTHAELA 644 Query: 401 TLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEE 459 I L R L+ + + +G+ E + R VS A ++P+ + G+ Sbjct: 645 KEIRLGLQRHEFVLHYQVQIDSQGRCTGAEALVRWNHRVRGLVSPAHFIPLAEETGMILP 704 Query: 460 YDRLQISRLIPLLRYWPEE------NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRI 513 + L W LA+ V+ L +P F +R+ L Q + ++ Sbjct: 705 LGEWVMESACQQLVEWSRNPMTAHWTLAVNVSASQLAQPEFVASVREAL-QRSGAPAGQL 763 Query: 514 IIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLV 573 +EL E+ + + + + + LGV +++ G S S++K L + LK+ V Sbjct: 764 KLELTESMLVDDVEDIIVKMMAIKELGVSFSLDDFGTGYSSLSYLKRLPLSQLKIDQSFV 823 Query: 574 RNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 R++ + ++ +++V V A GV + + L QG +F P Sbjct: 824 RDVLTDPSDAVIARTVVALGHSLGLTVIAEGVETAEQRDALAAMQCDAFQGYYFGRPAPA 883 Query: 634 DTNV 637 D + Sbjct: 884 DALI 887 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 587 bits (1514), Expect = e-166, Method: Composition-based stats. Identities = 87/446 (19%), Positives = 177/446 (39%), Gaps = 11/446 (2%) Query: 206 IQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPD 265 I+ + + I D TGL NR + + L ++ G VM + L Sbjct: 705 IKEDITEKRLTEERIEKLEHFDHLTGLPNRTQLNERFKYALSLAQRSGEQMTVMFLDLDH 764 Query: 266 FNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIA 325 F ++DT GHS ++ + L + ++R +F +LP A +A Sbjct: 765 FKDINDTLGHSIGDQLLMDVAKRLKETLR--DEDTVSRQGGDEFILILPGTDENGAAHVA 822 Query: 326 GQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAI 384 +L++AV + + IGI + G++ E + ++A++A G N + Sbjct: 823 AKLMEAVSQAFQFEQHELVATCSIGIAIYPHDGENFETLSKNADTAMYRVKHDGRNGFCF 882 Query: 385 YDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEV 442 + + ++ + L+RG L+ +P ++ ++G V E + R + Sbjct: 883 FTSEMQAHSARTLQLGNALRHALTRGQLHLHYQPQISTQDGHVVGAEALLRWQHPELGSI 942 Query: 443 SSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRW 497 S AE++P+ G + I L+ W + L A+ ++ + Sbjct: 943 SPAEFIPIAEDNGQIIPIGEWVLRTAIKQLKDWMDSGLPPMIMAVNLSAAQFRQSNLMEL 1002 Query: 498 LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 + L + K + + +EL EA V+ ++ G++++++ G S S+ Sbjct: 1003 VTSILDE-SKVPHRYLELELTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFGTGYSSLSY 1061 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 +K V LK+ V +I +++ +V +++ S Q A GV + + L + Sbjct: 1062 LKRFKVYKLKIDQSFVHDITDDPDDKAIVAAIINMASSLGMQTIAEGVETAGQLSFLRLQ 1121 Query: 618 GVTGGQGDFFASSQPLDTNVKKYSQR 643 G QG +F+ P + V ++ Sbjct: 1122 GCNEVQGYYFSKPLPAEQFVSYLQKQ 1147 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 586 bits (1511), Expect = e-165, Method: Composition-based stats. Identities = 84/455 (18%), Positives = 176/455 (38%), Gaps = 21/455 (4%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 +L ++ Q + I + A D T L NR ++L + + T+G V+ I Sbjct: 442 VLSDLT----QRKAAEEKIENLAFFDPLTKLPNRRLLLDRLKQAMASATRSVTNGAVLFI 497 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL--- 318 L +F L+DT+GH + + L + + G ++R+ +F LL Sbjct: 498 DLDNFKALNDTYGHPMGDLLLQQVAKRLVSSVR--DGDTVSRFGGDEFVVLLEGFDENPL 555 Query: 319 ---KEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNA 374 +AE++ Q+ A+ + IG + Q +++M+ A+ A A Sbjct: 556 DAASQAETVGEQIFAALRQPYLIGTHEYHGTSSIGATLFNDKQQSIDELMKQADIAMYQA 615 Query: 375 GLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCR 434 +G N +D + E + + + +L+ + V E + R Sbjct: 616 KKEGRNVLRFFDPQMQETIAKRTALEGDLRKAIENHQFQLHYQIQVDESRHPFGAEALIR 675 Query: 435 IFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN------LAIQVTVE 487 F VS +++P+ + L + ++ W + L++ V+ + Sbjct: 676 WFHPEHGMVSPDQFIPLAEESDLILPIGYWVLETACARIQRWQHDAKTSGFVLSVNVSAK 735 Query: 488 SLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQ 547 + F ++ + Q E + +EL E+ + +I + + LGV+ +++ Sbjct: 736 QFRQTDFVNQVQSLIQQYE-INPSLLKLELTESMLLDNIEDTIATMSALKELGVKFSLDD 794 Query: 548 AGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRS 607 G S ++K L ++ LK+ VR+I ++ +V++++ V A GV + Sbjct: 795 FGTGYSSLQYLKRLPLDQLKIDQSFVRDIAVDASDRAIVRTIIAMAHSLDLDVIAEGVET 854 Query: 608 RSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 + + L +G QG F P++ + Sbjct: 855 EEQQKHLSSKGCKNFQGYLFGKPVPIEQFETSLRK 889 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 585 bits (1509), Expect = e-165, Method: Composition-based stats. Identities = 98/492 (19%), Positives = 188/492 (38%), Gaps = 15/492 (3%) Query: 159 QRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDT 218 +R+ + E R G + V+ T+ + R+I R + Sbjct: 509 KRKSEDYSVEEVELGRRDGGTVWAEVVTTLGLNRRSGRVEFRAVARDISERRA----AEA 564 Query: 219 LIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQV 278 I+ A D TGL NR ++ ++ VM L F ++DT GH Sbjct: 565 EIQRLAHYDQLTGLPNRSLVKDRFRYAASLTQRRRGQLAVMFFDLDHFKNINDTLGHDFG 624 Query: 279 EEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNN 338 + + L + + G + R +F LLP + A +A +L++AV Sbjct: 625 DRLLVEVARRLESVLR--GGDTVCRLGGDEFVFLLPDTDAEGAARVAAKLLEAVAQPLVL 682 Query: 339 KMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNV 397 + IGI + G D + + +A++A A +G N + + +++ + + Sbjct: 683 DHQELTVTPSIGIAMYPDDGTDFDTLSRNADAAMYQAKREGRNGFRFFTEAMQARSTRTL 742 Query: 398 RWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFG 455 + L RG L+ +P V+ +G+V E + R VS E++P+ G Sbjct: 743 LLANALRHALDRGQFSLHYQPQVSLADGRVVGAEALLRWTHPEFGPVSPGEFVPIAESNG 802 Query: 456 LSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQR 510 L + + + R W +E L A+ ++ P + + + Sbjct: 803 LIAQIGEWVLREAVAQSRRWLDEGLPPLVMAVNLSAAQFRNPNLPELVSQVIEEA-GLPP 861 Query: 511 KRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHP 570 ++ +EL EA V+ + A G+R++++ G S ++K V LK+ Sbjct: 862 HQVELELTEAVAMDDPQSAVRVMDALFARGIRMSIDDFGTGYSSLGYLKRFKVGKLKIDQ 921 Query: 571 GLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASS 630 VR+I +++ +V +++ A GV + + L Q+G QG +F+ Sbjct: 922 SFVRDIGDDPDDKAIVSAIIHLAGSLGMLTVAEGVETLDQLDFLRQQGCDTVQGYYFSRP 981 Query: 631 QPLDTNVKKYSQ 642 P + V + Sbjct: 982 LPAEAFVGYLQE 993 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 584 bits (1506), Expect = e-165, Method: Composition-based stats. Identities = 96/475 (20%), Positives = 184/475 (38%), Gaps = 11/475 (2%) Query: 171 RATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKT 230 + I G + + P R + T I+ I S A DV T Sbjct: 379 QGEFINRRHNGEERIDLVRVSPVREADGRITHYLAIEEDITNQKNAQARIESLAHFDVLT 438 Query: 231 GLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLS 290 GL NR D + L E+ VM + L F ++DT GH+ + L L Sbjct: 439 GLPNRALLDERAQRALRLAEEDQATLAVMFLDLDHFKNINDTLGHNLGDTLLVELAQRLR 498 Query: 291 TFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIG 350 + R L+R +F LLP + A+ IA +L++A++ + + M IG Sbjct: 499 AVLRR--DDTLSRLGGDEFVLLLPGANRESAKKIAQELMRAINEPYRIGSHELNVMASIG 556 Query: 351 ICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSR 409 I + G D E + ++A+ A A +G N++ + + ++ + Q +++ Sbjct: 557 IAVYPADGMDFETLCKNADVAMYRAKQEGRNAYRSFTQEMQAYSTRYLQVLNALRQAIAQ 616 Query: 410 GGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISR 467 ++ +P ++ G V E + R +S AE++P+ + GL + + Sbjct: 617 EQLHVHYQPQISLISGDVIGAEALLRWHHPELGNISPAEFIPIAEESGLILQIGEWVLRV 676 Query: 468 LIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADV 522 + + W + L A+ ++ + L + E + + +EL E Sbjct: 677 AVAQAKKWHQLGLDKLIIAVNLSAVQFRHAGLPNLVMQILKE-EDFPPQYLELELTEGVA 735 Query: 523 GQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTEN 582 ++ ++ GVR++++ G S S++K+ LK+ VR+I E+ Sbjct: 736 MHDPQGAIAMMNSLHERGVRMSIDDFGTGYSSLSYLKQFKAYKLKIDQSFVRDISTDAED 795 Query: 583 QLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNV 637 + +V +++ Q A GV + + L + G QG ++ P Sbjct: 796 KAIVSAIIGMAKNLGLQTIAEGVETAEQQAFLREEGCHEAQGYHYSKPLPAADFE 850 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 583 bits (1505), Expect = e-165, Method: Composition-based stats. Identities = 95/455 (20%), Positives = 181/455 (39%), Gaps = 21/455 (4%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 + +I Q + IR+ A D T L NR ++L L + G V+ Sbjct: 681 AIFSDIT----QRKLAEEEIRNLAFYDALTRLPNRRLLLDRLHAALSVSARSRRFGAVLF 736 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL-- 318 + + F L+DT GH + + + + +AR +F L+ Sbjct: 737 LDMDRFKTLNDTMGHDYGDLLLIEVAERIKLCVREI--DTVARLGGDEFVILVEEIDTRA 794 Query: 319 ----KEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRN 373 K +IA ++ A+ K IG+C +R + T+ +++HA+ A Sbjct: 795 EETSKHIAAIAEKIRSALSVPYRLKEKHHHSSPSIGVCLYRGIEESTDDLLKHADMAMYQ 854 Query: 374 AGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMC 433 A G N+ +D + + V + L +LY + V + + E + Sbjct: 855 AKDSGRNAVRFFDPLMQQAVEARVTLENDLRHALPNDQLQLYYQIQVDNDRRAIGAEALV 914 Query: 434 RIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN------LAIQVTV 486 R VS A ++P+ + L E + L W + LA+ V+V Sbjct: 915 RWIHPIRGMVSPAHFIPIAEETSLILEVGAWVLKTACLQLAVWADRPMTCNLILAVNVSV 974 Query: 487 ESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVN 546 + + F + + L++ +R+ +EL E+ V +S + + + +LGVR++++ Sbjct: 975 QQFKQVGFVEHIAE-LIRAYCIVPQRLKLELTESVVLNDVSDIVQKMCALKSLGVRLSMD 1033 Query: 547 QAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVR 606 G S S++K L ++ LK+ VRNI + ++V++++ V A GV Sbjct: 1034 DFGTGYSSLSYLKNLPLDQLKIDQSFVRNIATDENDAVMVKTIIAMAQNFRLNVIAEGVE 1093 Query: 607 SRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 + ++ L Q G QG +F P++ + Sbjct: 1094 TEAQLAFLKQNGCMCYQGYYFGKPAPIEQFQSQLE 1128 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 582 bits (1501), Expect = e-164, Method: Composition-based stats. Identities = 91/468 (19%), Positives = 192/468 (41%), Gaps = 13/468 (2%) Query: 178 GERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLF 237 + GS ++ P R + T + N +H R + + A D TGL NR Sbjct: 414 RKDGSPFWNELFIAPVRDRDGVVTNYIGVMNDITEHRRYEEQLVYQATHDPLTGLPNRNL 473 Query: 238 FDNQLATLLE-DQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRY 296 ++L L + + VM + L +F ++DT GH+ + + N L + Sbjct: 474 LQDRLGQALALEAFRRRNPICVMFLDLDNFKKVNDTLGHTVGDMLLKAVANRLKNCLR-- 531 Query: 297 PGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR 355 G +AR ++ +LP+ R + + ++A ++I + IGI + Sbjct: 532 GGDTVARLGGDEYIIVLPNVREVPDVITVAKKMINVFAAPLLLMGNEIYVTASIGIALFP 591 Query: 356 -SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRL 414 G+ + ++++A++A +A QG N++ Y + + + T + + + L Sbjct: 592 TDGETVDALLKNADAAMYHAKEQGKNNYQFYSAEMNIRVFERLSLETSLHRAVKNQEFLL 651 Query: 415 YQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLL 472 + +P V R G++ E + R VS A+++P+ + GL + Sbjct: 652 HYQPRVDLRNGRICGVEALVRWNHPEMGLVSPAKFIPLAEETGLIVPMGEWVLRTACAQN 711 Query: 473 RYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHIS 527 + W + L A+ ++ + + + LM+ + + +EL E+ V Q Sbjct: 712 KAWQDAGLPPLRMAVNLSARQFRQENLIAMVEEILMET-GLAPQWLELELTESLVMQEAE 770 Query: 528 RLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQ 587 + ++R + G+ VA++ G S S++K + LK+ +R++ + ++ LV+ Sbjct: 771 KSAAILRELTDRGIEVAIDDFGTGYSSLSYLKRFPIANLKIDQAFIRDMTRDPDDATLVK 830 Query: 588 SLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDT 635 +++ G + A GV + L + QG +F+ + Sbjct: 831 TIITMAHGLGMKTIAEGVELAEQIDFLCRHQCEEMQGYYFSRPITAEE 878 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 578 bits (1492), Expect = e-163, Method: Composition-based stats. Identities = 82/457 (17%), Positives = 176/457 (38%), Gaps = 24/457 (5%) Query: 203 LREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLL--------EDQEKVGT 254 L++I + + + I+ A DV TGL NR F +L L + + G Sbjct: 423 LQDIT----ERKKTEEEIKFLAYHDVLTGLLNRKSFYTRLEDELIRSYSYDGDRRRIKGH 478 Query: 255 HGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLP 314 + + + F ++DT GH +E + L + + + R +F +L Sbjct: 479 KWALFFLDVDRFKYVNDTLGHDVGDELLKVVAVRLKNCLRK--SDYIFRLGGDEFTIILN 536 Query: 315 HRTLK-EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATR 372 T + +A ++ KA+ K + + IGI + G D E ++++A+ A Sbjct: 537 DLTDDTDMAKVAQKIRKAIARPCRIKDHELYITVSIGISIYPDDGDDVETLVKNADIAMY 596 Query: 373 NAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELM 432 A + + + + + K + + L +Y +P V Q+ E + Sbjct: 597 AAKEENQ-GYRFFIEEMNRKTLERMMLENNLRNALQHDQLIIYYQPLVDSTNQIVGMEAL 655 Query: 433 CRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTV 486 R +S ++++P+ + GL + + R W E +A+ ++V Sbjct: 656 LRWHHPELGLISPSQFIPLAEETGLIVPIGKWVLRCACQQARKWHEMGYTRFYVAVNLSV 715 Query: 487 ESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVN 546 P + L + + +E+ E+ + +H + ++++ A G+ +++ Sbjct: 716 RQFREPDLVETIEQIL-EATDLPPDCLKLEVTESGIMEHPEQAIAKMKMLRAKGIHFSID 774 Query: 547 QAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVR 606 G S S++K ++ LK+ V + ++Q ++++++ A GV Sbjct: 775 DFGTGYSSLSYLKRFPIDTLKIDRSFVIDSTTNKDDQEIIKTIIAMARNLGMDTVAEGVE 834 Query: 607 SRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 ++ + LI G QG +F P + R Sbjct: 835 AKEQQDFLIHHGCHMMQGYYFGRPMPAEKFEDMLQTR 871 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 578 bits (1491), Expect = e-163, Method: Composition-based stats. Identities = 89/450 (19%), Positives = 184/450 (40%), Gaps = 16/450 (3%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 + +I Q + + A D T L NR +L L + G +M + Sbjct: 389 IFSDIT----QRKLNEERLHYLANHDPLTDLPNRTLLMERLGAALTRAHRQGKRVALMFL 444 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKE 320 L F ++DT GH+ ++ T+ + L+ + +AR +F +L R L+ Sbjct: 445 DLDRFKFINDTLGHAVGDKLLQTVASRLTGSLR--ASDTVARLGGDEFNIVLEDIRDLRG 502 Query: 321 AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVME-HAESATRNAGLQGG 379 A +LI V + D +GI + T +V+ +A++A A +G Sbjct: 503 VAQTAQKLIDRVQGMVTLDGHDVYVTASVGIAIYPDDGSTPEVLRMNADTAMYRAKERGK 562 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIF-D 437 N++ + + +R + + + L+R +L+ +P V G ++ E + R Sbjct: 563 NNFQFFTADMNASTLARLRLESNLHRALARQEFQLHFQPKVDLAHGHIYGMEALLRWRSH 622 Query: 438 GNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRP 492 VS A+++P+ + L + + R+W L A+ ++ + + + Sbjct: 623 ELGPVSPADFIPIAEESNLISTIGEWVLEQACRQARHWLNLGLLPGTVAVNLSSKQMTQG 682 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 +R L + + +E+ E+ + + ++ + ALGVR+A++ G Sbjct: 683 DIVATVRRIL-EHSNLPGHYLELEITESVAMDNTGEMIRTLKNLKALGVRIAIDDFGTGY 741 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S S++K+L +++LK+ V ++ + ++ + +++ + Q A GV Q Sbjct: 742 SSLSYLKQLPIDVLKIDRSFVTDLHEDRDDAAIASAIISMGQSLNLQPVAEGVEREEHRQ 801 Query: 613 TLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 L+ G GQG F+ P T + + Sbjct: 802 FLLDHGCQYGQGYLFSRPVPAATMEQLLLE 831 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 578 bits (1490), Expect = e-163, Method: Composition-based stats. Identities = 89/469 (18%), Positives = 194/469 (41%), Gaps = 11/469 (2%) Query: 171 RATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKT 230 R I + G+ + P R + T I+ + +++ IR A D+ T Sbjct: 820 RGELINRRKDGTEYVELARISPLRHTDGRVTNYLSIKEDITEQKQVEARIRQLAHFDLLT 879 Query: 231 GLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLS 290 GL N+ ++ ++ ++ H V+ + + F ++DT GH +E L + Sbjct: 880 GLPNQTLLKDRAGFAMQMAQRSAHHLAVLFLDIDHFKNINDTLGHRIGDELLVHLAKRMK 939 Query: 291 TFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIG 350 + L+R+ +F +LP A +A ++++ V + + IG Sbjct: 940 LLLR--DEDTLSRFGGDEFILVLPDTDADGAAHVAEKILETVAKTCYIEQHELVVTPSIG 997 Query: 351 ICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSR 409 I + G D +++ + A+ A A G N++ + + + + + Q LSR Sbjct: 998 IAMYPSDGMDFDKLYQSADVAMYRAKQDGRNNFRFFTSEMQARSARRLLLENALRQALSR 1057 Query: 410 GGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISR 467 L+ +P ++ ++G++ E + R + +S AE++P+ + GL + Sbjct: 1058 NQFELHYQPQISMQDGKIVGAEALLRWYHPELGSISPAEFIPVAEESGLILSIGEWVLRT 1117 Query: 468 LIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADV 522 + ++ W + +AI ++ + R + L + + I +EL E+ Sbjct: 1118 AVQQVKRWQDAGHPPVTVAINLSAVQFRQARLSELVMQILHEANLAP-HWIELELTESVA 1176 Query: 523 GQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTEN 582 + V+ ++ G+R++++ G S S++++ V LK+ VR++ E+ Sbjct: 1177 MDNPLVAIGVMNDLHGCGIRMSIDDFGTGYSSLSYLRKFKVNKLKIDQSFVRDLADDIES 1236 Query: 583 QLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQ 631 + +V +++ S Q A GV + + L +G QG +F+ Sbjct: 1237 RAIVTAIITLASSMGFQTIAEGVETAGQLAFLRLQGCNEVQGYYFSRPL 1285 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 578 bits (1490), Expect = e-163, Method: Composition-based stats. Identities = 90/437 (20%), Positives = 174/437 (39%), Gaps = 13/437 (2%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEK--VGTHGIVMMIRLPDFNML 269 + + I A D T L NR +L L + G VM + L F + Sbjct: 959 ERKAAEEKISHLAHFDTLTDLPNRSNLQGRLDQALASARREGHGRSVAVMFLDLDRFKNI 1018 Query: 270 SDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLI 329 +DT GH + + L + + ++AR +F +L AE +AG+++ Sbjct: 1019 NDTLGHHVGDALLLEVAARLRSSVR--DSDVVARLGGDEFVVVLTGADALAAERVAGKIL 1076 Query: 330 KAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDS 388 KA+ + IGI + G+ E +M++A++A +A G N+ + S Sbjct: 1077 KALSRAYQIEGHALHSTSSIGIAVFPADGESVEVLMQNADAAMYHAKSAGRNNVQFFTAS 1136 Query: 389 LPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEY 447 + E + + L + L+ +P V + +V E + R + V A + Sbjct: 1137 MNEAASDRRQLEEDLHLALQQKQFVLHYQPQVDAQRRVFAVEALLRWQHPHHGLVPPARF 1196 Query: 448 MPMVLQFGLSEEYDRLQISRLIPLLRYW------PEENLAIQVTVESLIRPRFQRWLRDT 501 +P+ GL + + ++ W + +A+ V+ +P F LR Sbjct: 1197 VPLAEDTGLIVPIGQWVLETACAQIKAWSVDARTRKLQVAVNVSARQFRQPDFVELLRQA 1256 Query: 502 LMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKEL 561 + + R+ +EL E+ V +++ + + LGV +++ G S S++ L Sbjct: 1257 I-DNSGANPARLKLELTESLVLDNVADTIDKMNAIKLLGVTFSMDDFGTGYSSLSYLTRL 1315 Query: 562 NVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTG 621 ++ LK+ V + + + ++ Q++V +V A GV + ++ Q L G G Sbjct: 1316 PLDQLKIDRAFVCRLPENRSDAVIAQTIVTMGRSLGLKVVAEGVETEAQRQFLDSHGCDG 1375 Query: 622 GQGDFFASSQPLDTNVK 638 QG F+ +D Sbjct: 1376 YQGFLFSRPLAVDAFED 1392 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 577 bits (1489), Expect = e-163, Method: Composition-based stats. Identities = 94/473 (19%), Positives = 188/473 (39%), Gaps = 11/473 (2%) Query: 178 GERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLF 237 + G + P + T Q + + + I+ A D TGL NR Sbjct: 224 KKNGELYWASASISPITNGNEQITHFIAFQEDITERKQAEETIKQMAYYDTLTGLPNRHL 283 Query: 238 FDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYP 297 F+ + L + V+ + L F ++DT GH+ ++ + L R Sbjct: 284 FNELMHLALAQAHRHNRLLAVLFLDLDRFKHINDTLGHTVGDQLLQASAHRLKECCRR-D 342 Query: 298 GALLARYHRSDFAALLPHRT-LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR- 355 +AR +F LLP ++EA +A ++I A + ++ IGI + Sbjct: 343 RDTVARRGGDEFIILLPDIDDVQEAVRVAQKIIDAFTQVFVLPDIELFISTCIGISIFPN 402 Query: 356 SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLY 415 G+DTE ++++A+ A A QG + + +Y S+ E+ + + + L R LY Sbjct: 403 DGRDTETLIKNADMAMYRAKEQGRSRYHLYTSSMDEQAFRRLTMENSLRKALQREEFSLY 462 Query: 416 QKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLR 473 +P V + GQ+ E + R + + +++P+ GL + + Sbjct: 463 YQPKVNIKTGQIVCLEALVRWQNPEMGLILPNQFIPLAEDTGLIIPLGEWVLRTACAQNK 522 Query: 474 YW-----PEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISR 528 W P +A+ + +PR + L + + + + +EL E + Q++ + Sbjct: 523 TWQLLNYPPMRVAVNFSPRQFQQPRLTDMVEQILGEADLAPC-WLELELTENVMLQNVEK 581 Query: 529 LQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQS 588 + ++ LG+ ++++ G S S+IK+L ++ LK+ V +I ++ + + Sbjct: 582 TVQTLNRLSNLGIHISIDDFGTGYSSLSYIKKLPIQTLKIDRSFVHDINTNADDAAIAIA 641 Query: 589 LVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 ++ V A GV + + + L QG F+ P+ S Sbjct: 642 VITMAQSLRLNVIAEGVETLEQMKLLDGLNCPEMQGYLFSKPLPVAEMTTLLS 694 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 577 bits (1487), Expect = e-163, Method: Composition-based stats. Identities = 90/464 (19%), Positives = 193/464 (41%), Gaps = 18/464 (3%) Query: 192 PPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEK 251 P + + ++ + + E + + IR A D T L NR F +LA + ++ Sbjct: 354 PIEENGEIVEMVGSMIDITE-RKKAEETIRYMAHYDSLTNLPNRTLFHEKLAEAMLKAKQ 412 Query: 252 VGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAA 311 VM I L F ++DT GHS + + N L + + ++R +FA Sbjct: 413 KDEKIGVMFIDLDRFKNINDTLGHSIGDVLLQAVANRLICCLRKEDS--VSRLGGDEFAI 470 Query: 312 LLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESA 370 L T +EA IA ++I ++ ++ IGI + G D E +++HA++A Sbjct: 471 FLTGVTHREAGEIAQRIITSMSESITLDHIEIFITPSIGISMYPDDGDDIEALLKHADAA 530 Query: 371 TRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHR 429 A QG N++ + + L + ++ + + L L+ +P + + GQ+ Sbjct: 531 MYLAKEQGKNNYQFFSEELHQVLAKKLQLERELRKALDEKQFTLHYQPKIHLQTGQIIGM 590 Query: 430 ELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQ 483 E + R + + +++P+ + GL + + W E +A+ Sbjct: 591 EALIRWDHPDLGLIPPIQFIPIAEETGLIVPLGEWVMRTACQQTKAWQEAGFTQLAVAVN 650 Query: 484 VTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRV 543 +++ ++ + L + + + +E+ E+ ++ ++ + ALGV + Sbjct: 651 ISLRQFMQNNLIEMITSILEET-GLAPQYLELEITESMAL-NVDYTIRILNRLKALGVSI 708 Query: 544 AVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYAT 603 +++ G S S++ + ++ LK+ +RN+ +NQ ++++++ V A Sbjct: 709 SIDDFGTGYSSLSYLSQFPIDRLKIDQSFLRNL--NPQNQAIIKTIIHMAHNMKIAVIAE 766 Query: 604 GVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ--RYS 645 GV + L ++ QG F++ P + + Q RY Sbjct: 767 GVETHEHVDFLKEQLCNEVQGYFYSKPLPTKE-IDSFLQVNRYG 809 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 577 bits (1487), Expect = e-163, Method: Composition-based stats. Identities = 87/480 (18%), Positives = 181/480 (37%), Gaps = 12/480 (2%) Query: 165 QELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYA 224 E E A + G+ +Y P + + + R ++ + Sbjct: 460 LEKREGHAVLRNYRKDGALFWSDLYIAPVKDDTGEVSHFVVALYDITATKRYESELEFQT 519 Query: 225 AQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFT 284 +D TGL NR ++L+ + + + + L F ++DT GH + Sbjct: 520 NRDALTGLANRSLLRDRLSQAISYAHRYNHPIWIAFVDLDRFKFVNDTLGHQAGDLLLKA 579 Query: 285 LTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDR 343 + L + ++R +F +LP R + I +++ + + + Sbjct: 580 IAERLQHAVR--DTDTVSRMGGDEFVLILPERVDAGLSTGIVQRIMDGIAQPLTIEGHEF 637 Query: 344 DDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTL 402 IG+ + G E++++HA+ A A G N++ Y S+ E+ +R Sbjct: 638 FISSSIGVAVYPNDGVTPEELIKHADIAMYRAKETGRNNFQFYTSSMNERALERLRLEGD 697 Query: 403 IEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEY 460 + + RG L+ +P + R G++ E + R + ++ + + GL Sbjct: 698 LRNAMERGEFILHYQPQLDLRTGKIVGVEALIRWQHPELGMIPPMRFIGLAEETGLIVPI 757 Query: 461 DRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIII 515 I + W E L ++ ++ + + L + + + + I Sbjct: 758 GAWVIREACRQNKVWQEHGLGSLRMSVNLSARQFAQQDLLESIALALEETQ-LPPQCLEI 816 Query: 516 ELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRN 575 EL E+ V + ++R + ALGV+++++ G S S++K +++LK+ V + Sbjct: 817 ELTESLVMADVDHAIGILRELKALGVQLSIDDFGTGYSSLSYLKRFPIDVLKIDRSFVND 876 Query: 576 IEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDT 635 I ++ +V S++ V A GV + + L Q QG FF+ D Sbjct: 877 ITTDPDDAAIVASIISLAHSLRLTVIAEGVETEEQLAYLQQHDCDQIQGYFFSRPITADA 936 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 575 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 87/455 (19%), Positives = 183/455 (40%), Gaps = 16/455 (3%) Query: 196 SSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTH 255 + + + +I + + I + A D T L NR+ F Q+ T LE ++ T Sbjct: 597 TQQIIYIFSDIT----ERKLFEEHIYNLAHHDSLTQLPNRVAFQLQMNTALERAKRSKTQ 652 Query: 256 GIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH 315 VM I L F M++DT GH + + + + +++R+ +F LL + Sbjct: 653 MAVMFIDLDHFKMINDTSGHPVGDLLLQQVAERFKRALRKE--DVISRFGGDEFTVLLSN 710 Query: 316 RTLKEAESI-AGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRN 373 A ++ A +L+ + IGI + G + +M +A+SA Sbjct: 711 TRTDNATTVVARKLLACFYEPFKLPSSEVVISASIGIGVFPDNGDSVDSLMMNADSAMYR 770 Query: 374 AGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMC 433 A +G N + Y + + + + + + L R L+ +P G++ E + Sbjct: 771 AKEKGRNCFQFYTKEMNQYAQERLELELDLRKALERDEFVLHYQPQFDPNGRIIGCEALI 830 Query: 434 RIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW-----PEENLAIQVTVE 487 R + +S E++ M GL + I + W P N+++ ++ Sbjct: 831 RWQHPDKGLLSPGEFINMAEITGLIVPIGKWVIDTACMQHKMWLSQGYPALNISVNLSGR 890 Query: 488 SLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQ 547 + +++ + + +EL E+ + ++ + +++LG+ ++++ Sbjct: 891 QFLHHDLLETVKNAIT-TSGITPSCLELELTESIMMVNVEETIRTLNAISSLGIHMSIDD 949 Query: 548 AGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRS 607 G S S +K V LK+ VR + + E+ +V+S++ + V A GV + Sbjct: 950 FGTGYSSMSCLKRFPVNKLKIDQSFVRGLPQDKEDVAIVKSIIVMAHALNLTVIAEGVET 1009 Query: 608 RSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 + + L QG +F+ L ++++Y Q Sbjct: 1010 LEQLEFLKSSRCEEFQGYYFSRPI-LAADIEQYLQ 1043 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 575 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 99/503 (19%), Positives = 198/503 (39%), Gaps = 27/503 (5%) Query: 159 QRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDT 218 R++ E++E + G+ + + ++I + + R + Sbjct: 323 NRRVYEGEVIEAEVEYQVGGQTRIFNNVVAPIKVDGQTIGIVGFNQDITDRK----RNEE 378 Query: 219 LIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQV 278 I A D T L NR ++L L + +HG +++I L +F L+DT GH Sbjct: 379 EIHRLAFYDSLTHLPNRRLMFDRLEHALIGSARRKSHGALLLIDLDNFKFLNDTHGHEVG 438 Query: 279 EEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK-----EAESIAGQLIKAVD 333 +E + L T + + G AR +F +L +AE IAG + ++ Sbjct: 439 DELLLEVAKRLKTCIRQ--GDTAARLGGDEFVVILEDIDGAGNGTIQAELIAGHIQAQLN 496 Query: 334 ------TLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYD 386 P +D IGI + ++++ A++A A G N+ +D Sbjct: 497 HPFSLVRPPERLSIDYRCASSIGIALFDDTMVTAKELLRRADTAMYQAKAAGRNTLRFFD 556 Query: 387 DSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEE-VSSA 445 + T + + + L + + + G+ E + R + A Sbjct: 557 PEMQAAVTHRAALETELRKAIDEQQFHLCFQVQMDQSGRPTGGEALLRWEHPTRGTIPPA 616 Query: 446 EYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE------NLAIQVTVESLIRPRFQRWLR 499 ++P+ + GL + ++ L W ++ LA+ V+ + RF LR Sbjct: 617 SFIPLAEETGLIVPIGQWVLATACRQLAAWSQQPETSGLTLAVNVSARQFRQARFTDQLR 676 Query: 500 DTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIK 559 D L+Q + R+ +EL E+ + + + + + LG+R +++ G S +++K Sbjct: 677 DLLLQT-GAPATRLKLELTESMMLEDTEAIIGRMAELKQLGIRFSLDDFGTGYSSLAYLK 735 Query: 560 ELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGV 619 L + LK+ VR++ + + +++V + +V A GV + ++W+ L G Sbjct: 736 RLPLNQLKIDQSFVRDVLTDPNDAAIAETIVALGNILGLEVIAEGVETDAQWRFLANVGC 795 Query: 620 TGGQGDFFASSQPLDTNVKKYSQ 642 QG F PL +++ Q Sbjct: 796 KNYQGYLFGRPLPLLEF-EQFLQ 817 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 94/491 (19%), Positives = 201/491 (40%), Gaps = 18/491 (3%) Query: 165 QELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYA 224 ++ R + + G + + P S+ + T +Q + ++ I+ A Sbjct: 746 KQGESVRTELVNYRKNGEEIWLEMDILPIANSAGVFTHWVSVQRDITERKAAESRIQHLA 805 Query: 225 AQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFT 284 D+ T L NRL ++L L + ++ G ++ + L +F L+DT GH + Sbjct: 806 FYDMLTNLPNRLLLLDRLEQALLNSMRLKRSGALLFLDLDNFKTLNDTHGHDFGDMLLEQ 865 Query: 285 LTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK------EAESIAGQLIKAVDTLPNN 338 + L + +AR +F ++ + + + EA +A +++ A+ Sbjct: 866 VAQRLLNSVR--ITDTVARLGGDEFVVVVENLSEQGCNAAQEASLVADKILLALSQPFRL 923 Query: 339 KMLDRDDMIHIGICAWRSGQ--DTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGN 396 + IG+ + + Q +++++ A+ A A G N++ +D ++ Sbjct: 924 SGYEHYSSCSIGVALFCNEQQVTVDELLKRADLAMYEAKAAGRNTFRFFDPAMQALITKR 983 Query: 397 VRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFG 455 + Q L R RLY +P V +G + E + R +S A ++ + + G Sbjct: 984 AAMEEDLRQALRRDEMRLYYQPQVDSQGSLLGAEALVRWEHPQQGLLSPAAFIELAEETG 1043 Query: 456 LSEEYDRLQISRLIPLLRYWPEEN------LAIQVTVESLIRPRFQRWLRDTLMQCEKSQ 509 L + L W L++ V+ L + F + L + + Sbjct: 1044 LILPIGEWVLRTACMQLVAWAGRPETAGLVLSVNVSARQLHQHDFIDRVFSILKET-GAN 1102 Query: 510 RKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLH 569 + + +EL E+ + ++I + + ++ A+GV +++ G S +++K L + LK+ Sbjct: 1103 PQSLKLELTESTLVENIEEMITKMNILKAMGVGFSMDDFGTGYSSLAYLKRLPLSQLKID 1162 Query: 570 PGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFAS 629 VR++ + + +VQ+++ G +V A GV S + Q L + G QG F Sbjct: 1163 RSFVRDVLVDSNDASIVQTIIALGHGLGIEVVAEGVESWEQQQFLEKHGCLEYQGYLFGR 1222 Query: 630 SQPLDTNVKKY 640 QP + +++ Sbjct: 1223 PQPAEQLEREF 1233 >UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=C6NZZ7_9PROT Length = 1152 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 91/442 (20%), Positives = 178/442 (40%), Gaps = 17/442 (3%) Query: 213 HSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDT 272 R + I+S A D T L NR ++L L + G G ++ I L +F L+DT Sbjct: 701 RKRAEEEIKSLAFYDPLTHLPNRRLLVDRLQHALASSTRSGREGALLFIDLDNFKTLNDT 760 Query: 273 WGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK------EAESIAG 326 GH + + L++ + G +AR +F +L + + + ESI Sbjct: 761 LGHDIGDLLLQQVALRLASCVRE--GDTVARLGGDEFVVMLEELSEQTLEAAAQTESIGE 818 Query: 327 QLIKAVDTLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIY 385 +++ ++ + + IG + Q E++++ A+ A A G N+ + Sbjct: 819 KILLTLNQPYLLAAHEYRNSPSIGATLFGNKPQSIEELLKQADIAMYQAKKAGRNTLRFF 878 Query: 386 DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEE-VSS 444 D + E + + L +LY + +T + E + R + Sbjct: 879 DPQMQETVIARALLERELSKALENDQFQLYYQIQMTDLNEPFGAEALIRWIHPERGLIPP 938 Query: 445 AEYMPMVLQFGLSEEYDRLQISRLIPLLRYW------PEENLAIQVTVESLIRPRFQRWL 498 ++P+ + GL + ++ W E LA+ V+ S + F + Sbjct: 939 NHFIPLAEEVGLILPIGLWVLDTACNQIKIWEKNASTRELVLAVNVSARSFFQDDFVTQI 998 Query: 499 RDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWI 558 T++Q KR+ +E+ E+ + I + + + LGV+ A++ G S ++ Sbjct: 999 -QTVLQRHAINPKRLKLEITESMMLNSIEQTIEKMNALKKLGVQFAMDDFGTGYSSLQYL 1057 Query: 559 KELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRG 618 K L ++ LK+ VR+I + ++ +V ++V + V A GV + + Q LI+ G Sbjct: 1058 KRLPLDQLKIDQSFVRDIATDSSDKAIVTTIVAMAHSLNLDVIAEGVETEQQRQLLIESG 1117 Query: 619 VTGGQGDFFASSQPLDTNVKKY 640 + QG F P+ + Sbjct: 1118 CSQYQGYLFGKPAPIRQFEESL 1139 >UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY75_PSYIN Length = 591 Score = 574 bits (1480), Expect = e-162, Method: Composition-based stats. Identities = 90/482 (18%), Positives = 194/482 (40%), Gaps = 17/482 (3%) Query: 169 ETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDV 228 + +A R + + L + + ++ L + +++ ++ ++L + A D Sbjct: 103 KEKAKRAVELAIANKELAFQSKEKAKRAAELAIVNQDLTFQSKEKAKLAEELNDLAFYDT 162 Query: 229 KTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNL 288 TGL NR ++L L + G VM I L F ++DT GH + Sbjct: 163 LTGLPNRRLLIDRLHHALASNVRQGCESAVMFIDLDHFKDINDTLGHEVGDLLLIQTAQR 222 Query: 289 LSTFMMRYPGALLARYHRSDFAALLPHRTLK------EAESIAGQLIKAVDTLPNNKMLD 342 L + + + G +AR +F +L + +A++IA +++ ++ M Sbjct: 223 LESCLRK--GDTVARLGGDEFMLILENLDENPIEAATKAKAIADKILAELNKPYQLDMHK 280 Query: 343 RDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRT 401 + IG + G E +++ A+ A A GGN ++ + E + Sbjct: 281 CHSTVSIGAVFFDHQGNTAEDLIKQADIAMYQAKQAGGNLIRFFNPKMQESINARITLEN 340 Query: 402 LIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEY 460 + + + LY + + + +V E + R + V A ++P+ + GL Sbjct: 341 ELRIAIEKSQFHLYYQIQMDSDNRVLGAEALIRWTNPEHGLVLPATFIPIAEETGLILSI 400 Query: 461 DRLQISRLIPLLRYWP------EENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRII 514 + I ++ W + LA+ V+ + + F ++ + Q + Sbjct: 401 GKWVIETACAQIKVWQKKSQTRDLTLAVNVSAKQFRQKDFVDQVQSAV-QRHAIPGNLLK 459 Query: 515 IELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVR 574 +EL E+ + +++ +N +GV+ +++ G S ++K L ++ K+ VR Sbjct: 460 LELTESLLQYDTEVTIAMMKALNKIGVQFSLDDFGTGYSSLQYLKRLPLDQFKIDQSFVR 519 Query: 575 NIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLD 634 +I ++ +V++++ V A GV + + Q L+ +G T QG F+ P+D Sbjct: 520 DIATDNNDKAIVKAIIAMAQILDIDVIAEGVETEEQQQLLLGKGCTLYQGYLFSKPIPID 579 Query: 635 TN 636 Sbjct: 580 QF 581 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 574 bits (1480), Expect = e-162, Method: Composition-based stats. Identities = 91/439 (20%), Positives = 179/439 (40%), Gaps = 16/439 (3%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 +L +I ++ R+ R A D TGL NRL +LA LL + + G VM I Sbjct: 380 ILADITERKQAEDRM----RHIAQHDALTGLPNRLALLMRLAQLLPEARRHGWTVAVMFI 435 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKE 320 L F +++DT GH +E + LS + +AR +F +LP + + Sbjct: 436 DLDRFKIINDTLGHQVGDEMLREVACRLSNLLRET--DFVARLGGDEFVIILPSISSPAD 493 Query: 321 AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGG 379 A ++G++I A+ T + + IGI + G D + V+++A++A +A G Sbjct: 494 AAIVSGKIISALSTAIEAEGHELHTSPSIGISIFPDDGPDGDIVLKNADTAMYHAKAAGR 553 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCRIFDG 438 N++ + + + + ++R L +P + E + R Sbjct: 554 NNYQFFAADMNRTAAERLNIERKLRHAIARNELSLVFQPQFRAEDTTPTGVEALLRWHHP 613 Query: 439 -NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRP 492 + +S A ++P+ + G+ E ++ + W L A+ V+ L R Sbjct: 614 TDGMISPARFIPVAEETGMIVEIGDWVLATACHEMARWINAGLKPLRIAVNVSARQLRRR 673 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 F + + L + + +E+ E+ V ++ ++ + +GV +A++ G Sbjct: 674 DFCETVANALT-TSGLPAELLELEITESSVMENPQEAIHILERLGRMGVTLAIDDFGTGY 732 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S +++K ++ LK+ V +IE ++ + + V A GV + + + Sbjct: 733 SSLAYLKLFPIDHLKIDRSFVADIEHDLNDRAIAFGTIALAHSLGLNVIAEGVETEDQHE 792 Query: 613 TLIQRGVTGGQGDFFASSQ 631 L G QG F+ Sbjct: 793 LLRANGCDEVQGFLFSKPL 811 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 573 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 99/493 (20%), Positives = 195/493 (39%), Gaps = 27/493 (5%) Query: 173 TRILNGERGSNVLGTIYEWPPRTSSA--LDTLLREIQNAREQHSRLDTLIRSYAAQDVKT 230 RI G + + A L +++I + R + IR A D T Sbjct: 217 YRITLGGGERTLHAELVTVLDEQGEAVCLTGTIQDIT----ERKRAEEQIRLLAYYDALT 272 Query: 231 GLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLS 290 GL NR FF QL L + V+ + L F +++DT GH + + + L Sbjct: 273 GLPNRRFFLQQLEQALVFANRYDRMLAVLFLDLDRFKLVNDTLGHGVGDRLLQDVADRLL 332 Query: 291 TFMMRYPG----------ALLARYHRSDFAALLPHRTL-KEAESIAGQLIKAVDTLPNNK 339 + R +L++R +F +L ++ IA ++++AV + + Sbjct: 333 RCVRRGDCLARADEECPPSLVSRLGGDEFTIMLSDIEHFQDVAKIARRILEAVSVPYSLE 392 Query: 340 MLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVR 398 + IGI + ++ +A+ A A QG N + IYD+S+ K + Sbjct: 393 GQEVFVSTSIGISLYPFDATTASDLIRNADGAMYQAKEQGRNGYQIYDESMNAKALERII 452 Query: 399 WRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGL 456 + + + L +Y +P V + G+V E + R V ++P+ + GL Sbjct: 453 LESQLHKALKEEEFIVYYQPQVSNQSGRVVGIEALVRWNSKELGLVEPGRFLPLAEEIGL 512 Query: 457 SEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRK 511 + D+ + + W + LAI ++ + ++ + L + Sbjct: 513 VIQIDQWVMREACRQHKLWLDAGFPPVTLAINISGQQFMKNELLETVTSVLKE-SGLDPG 571 Query: 512 RIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPG 571 + +EL E + H R ++ + +GVR+A++ G S S++K +++LK+ Sbjct: 572 LLELELTEGVLMAHTERTVKTLQALKGMGVRLAIDDFGTGFSSLSYLKRFPLDVLKIDRT 631 Query: 572 LVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQ 631 + +I ++ + + +E +V A GV ++ + L + G QG F+ Sbjct: 632 FINDITTDPDDAAITLATIEMAHTMKLKVIAEGVETKPQLDFLTKNGCDMYQGYLFSKPV 691 Query: 632 PLDTNVKKYSQRY 644 P T + + R+ Sbjct: 692 P-STELPRLFNRW 703 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 573 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 86/428 (20%), Positives = 169/428 (39%), Gaps = 11/428 (2%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 QH + I+ A D TGL NR + ++ L + +M + L F ++D Sbjct: 962 QHKEAEASIQRLAHFDALTGLPNRSLLEERVRHDLARAHRGREALALMFVDLDRFKNVND 1021 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKA 331 + GH + + L + ++R +F +LP A +A +L++ Sbjct: 1022 SLGHRVGDALLIQVAERLRRAVR--DEDTVSRLGGDEFIVVLPSTDADGAAHVAAKLLEV 1079 Query: 332 VDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLP 390 + + + + GI + G+ E + A++A A G N++ + + Sbjct: 1080 MAPAYRIEQHELTCSLSAGIAMYPADGESFEALSMSADTAMYRAKQSGRNAYCFFTAEMQ 1139 Query: 391 EKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYM 448 E+ N++ + + L G RL+ +P T + ++ E + R VS E++ Sbjct: 1140 ERSARNLQIENDLRRALENGELRLHYQPQFTLADRRLVGAEALLRWQHPQLGMVSPVEFI 1199 Query: 449 PMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLM 503 P+ + GL + + LR W +E L A+ ++ + + L Sbjct: 1200 PIAEECGLILPIGEWVLRAAVSQLRVWQQEGLPPMTVAVNLSAVQFRQASLTDVVSRIL- 1258 Query: 504 QCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNV 563 E + + +EL E+ + + + ALGVR++++ G S S++K V Sbjct: 1259 DAEGLAAQFLELELTESVAMDNPLAAIATMDKLRALGVRMSIDDFGTGYSSMSYLKRFRV 1318 Query: 564 ELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQ 623 LK+ V ++ E++ +V + + Q A GV S ++ L +G Q Sbjct: 1319 HKLKIDRSFVADLAADPEDEAIVTATISLARDLGLQTIAEGVESEAQLAFLRAKGCDEAQ 1378 Query: 624 GDFFASSQ 631 G F+ Sbjct: 1379 GYLFSRPL 1386 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 573 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 89/470 (18%), Positives = 183/470 (38%), Gaps = 11/470 (2%) Query: 171 RATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKT 230 I + S + + P + + T I+ + + + + A D T Sbjct: 468 HGEIINRRKDKSIYIESATITPVKQADGKITNYVAIKEDITEKKKAEAYTENLAYFDQLT 527 Query: 231 GLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLS 290 GL NR Q+ L + VM + L +F ++D+ GH+ ++ + + Sbjct: 528 GLPNRRMLQAQVKYRLNMAQSNHQPLTVMFLDLDNFKNINDSLGHTVGDQVLIKIAKRIK 587 Query: 291 TFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIG 350 + ++R +F L P+ A IA LI+ + + + IG Sbjct: 588 KAIREV--DTVSRLGGDEFIMLFPNTDANAAMHIATTLIQEISKASVVEHNELTITPSIG 645 Query: 351 ICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSR 409 I + G D + ++++AE+A N + + N++ + L R Sbjct: 646 IAIYPNDGNDFKTLLKNAETAMYRVKNDSRNGFHFVTPEMQLSASRNLQLENALRHALKR 705 Query: 410 GGPRLYQKPAVTRE-GQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISR 467 +LY +P ++ GQ+ E + R +S AE++P+ G E + Sbjct: 706 NELQLYYQPQISTSNGQIIGAEALLRWHHPELGMISPAEFIPIAESSGQIIEIGEWVLRT 765 Query: 468 LIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADV 522 I + W ++ +A+ ++V + + D L + + + + +EL EA Sbjct: 766 AIRQTKNWMDDGFTPMIIAVNLSVVQFRQKNLLTLITDILAEVQ-LPNEYLELELTEAVT 824 Query: 523 GQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTEN 582 + V+ + G+R++++ G S S++K+ V LK+ +R+I ++ Sbjct: 825 MHDPESVINVMNTFHEQGIRMSIDDFGTGYSSLSYLKKFKVYKLKIDQSFIRDISNDPDD 884 Query: 583 QLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQP 632 + +V ++++ S Q A GV + + L G QG +F+ P Sbjct: 885 RAIVSAIIDMASNLGLQTIAEGVETAEQLAFLRLHGCHEVQGYYFSKPLP 934 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 573 bits (1478), Expect = e-162, Method: Composition-based stats. Identities = 80/443 (18%), Positives = 181/443 (40%), Gaps = 16/443 (3%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 +LR+I + R + + A D TGL NR F ++L L +E+ G V+ + Sbjct: 416 VLRDIS----ERKRFEGELMHMAHHDALTGLPNRTLFFDRLRQGLYKKERSGKMLAVIYL 471 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKE 320 L F +++DT GH + + + L + + ++R +F ++ T + Sbjct: 472 DLDRFKIINDTLGHHTGDMLLKEVADRLRGVVRK--ADTISRLGGDEFTIIIDEIATPAD 529 Query: 321 AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGG 379 + +A +++ + + +G+ + G E+++++A++A +A +G Sbjct: 530 SLLVAEKILHVFSAPFRLEKHEMFITASMGVTLYPNDGDTAEKLLKNADTAMYHAKEEGR 589 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFDG 438 N++ + + + + + T + L+R L+ +P V G++ E + R Sbjct: 590 NTYQFFSEEMNSRVSERLSMETGLRHALARNEFLLHYQPRVNTTTGRIVGVEALIRWQQP 649 Query: 439 N-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRP 492 + ++P+ + GL + R W E +++ ++ Sbjct: 650 QKGLILPDAFIPLAEETGLIIPIGEWVLRNTCTQARAWQEAGFAQMRISVNISCRQFTHD 709 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 +R L + Q + +E+ E+ + + R ++ + +G+ +A++ G Sbjct: 710 NLPDTIRGILRET-GLQPSCLELEITESVIMLNPERAISLLNELKEMGISIAIDDFGTGY 768 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S S +K L ++LK+ V I ++ LV +++ + A GV + + Sbjct: 769 SSLSLLKRLPADILKIDKSFVSGIPGNKSDETLVATIINLGHNMGLGLVAEGVERQEQLH 828 Query: 613 TLIQRGVTGGQGDFFASSQPLDT 635 L +R QG +F+ P +T Sbjct: 829 FLEERNCQEVQGYYFSKPLPAET 851 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 573 bits (1478), Expect = e-162, Method: Composition-based stats. Identities = 86/453 (18%), Positives = 171/453 (37%), Gaps = 18/453 (3%) Query: 206 IQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPD 265 I Q + I+ A D TGL NR+ +++ L ++ G ++ I L + Sbjct: 1046 IDTDIGQRKATEREIQRLAFYDSLTGLPNRMLLMDRMRHALATAQRRRQGGALLFIDLDN 1105 Query: 266 FNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK------ 319 F L+DT GH Q + + L+T + +AR +F ++ + Sbjct: 1106 FKTLNDTLGHDQGDVLLQQVAARLNTCVRSV--DTVARLGGDEFVVMIEGLSTHPGELAM 1163 Query: 320 EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQD--TEQVMEHAESATRNAGLQ 377 A ++ +++ + T + IG+ + G+ ++++ A+ A A Sbjct: 1164 SARTVGEKILAVLATPYVLQGYHYRSTPSIGVAPFGDGRTSTVGELLKQADLAMYQAKTA 1223 Query: 378 GGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFD 437 G N+ +D + + L+R L+ +P + R G V E + R Sbjct: 1224 GRNTLRFFDPGMQAVVTARAELENDLRTALAREQFMLHYQPQIDRRGSVTGVEALVRWPH 1283 Query: 438 GN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPE------ENLAIQVTVESLI 490 VS E++P+ + GL R + L W ++A+ V+ Sbjct: 1284 PQRGMVSPGEFIPLAEETGLVLPLGRWVLHTACAQLARWQHVPGRGHLSMAVNVSSRQFH 1343 Query: 491 RPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGL 550 F + + + R+ +EL E+ + + + + + GV +++ G Sbjct: 1344 HEAFVEDVVRAITAT-GAPASRLKLELTESLFVEDMETTIATMAALRSHGVGFSLDDFGT 1402 Query: 551 TLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSE 610 S S++K + ++ LK+ VR++ + +V +++ V A GV + + Sbjct: 1403 GYSSLSYLKRMPLDQLKIDQSFVRDLLADPNDAAIVDTIIALSRSLGLDVIAEGVETAEQ 1462 Query: 611 WQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 L Q G QG FF+ P Q+ Sbjct: 1463 RTRLEQAGCRAYQGYFFSRPLPETALEDFLVQK 1495 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 573 bits (1478), Expect = e-162, Method: Composition-based stats. Identities = 88/452 (19%), Positives = 178/452 (39%), Gaps = 21/452 (4%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 ++++I +H + I + A D TGL NR ++L L + G G ++ Sbjct: 362 AIVQDIT----EHKAAEEKINNLAFYDPLTGLPNRRLLLDRLQHALASSARSGREGALLF 417 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE 320 I L +F L+DT GH + + L++ + G +AR +F +L + Sbjct: 418 IDLDNFKALNDTLGHDMGDLLLRQVAQRLASCVRE--GDSIARLGGDEFVVMLEDLGGHD 475 Query: 321 AESIA------GQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDT-EQVMEHAESATRN 373 E+ A +++ + + IG + + E++++ A+ A Sbjct: 476 LEAAAQTEAVGEKILAMLGLPYQLVAHEYRCTPSIGATLFSGHELAKEELLKRADIAMYQ 535 Query: 374 AGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMC 433 A G N+ +D + + V + + L R RL+ + V G+ E + Sbjct: 536 AKQAGRNTVRFFDQQMQDAVTARVALEGELHKALDRQQFRLHYQIQVDASGRPLGAEALI 595 Query: 434 RIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN------LAIQVTV 486 R V +++ M + L + + L+ W + LA+ V+ Sbjct: 596 RWMHPERGLVPPDQFIGMAEETDLILPIGQWVMDTACAQLKTWQQHAPTRDLVLAVNVSA 655 Query: 487 ESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVN 546 + F +R T+ Q K + +EL E+ + ++I + + +GV+ +++ Sbjct: 656 TQFHQLDFVFQVRATV-QRHAIDPKLLKLELTESMLLENIEDTIRTMNALKEIGVQFSLD 714 Query: 547 QAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVR 606 G S ++K L ++ +K+ VR+I + ++ +V +++ V A GV Sbjct: 715 DFGTGYSSLQYLKRLPLDQIKIDQSFVRDIASDSNDREIVGTIIAMAQNLYLDVIAEGVE 774 Query: 607 SRSEWQTLIQRGVTGGQGDFFASSQPLDTNVK 638 + + Q L G T QG F P++ Sbjct: 775 TEEQRQFLQDNGCTHFQGYLFGKPVPVEQFEA 806 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 573 bits (1478), Expect = e-162, Method: Composition-based stats. Identities = 85/478 (17%), Positives = 192/478 (40%), Gaps = 27/478 (5%) Query: 186 GTIYEWPPRTSSALDT---------LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRL 236 G I+ S LDT + +I +E + I+ A D TGL NR Sbjct: 996 GEIFPEWLSISRGLDTSGNVTEYVGIFNDISKVKES----EEKIKHLAHYDPLTGLVNRE 1051 Query: 237 FFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRY 296 ++L + ++ T ++ I L F ++DT GH ++ + + + Sbjct: 1052 LLMDRLNHSISTADRNNTPLALLFIDLDHFKNVNDTLGHQVGDQLLIEVGQRILKILR-- 1109 Query: 297 PGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR- 355 +AR +F +LP A +A ++++++ N K IGI + Sbjct: 1110 DEDTIARQGGDEFIVVLPDTGENGAVHVAEKILESISDQLNLKPYKLFITPSIGIAVYPQ 1169 Query: 356 SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLY 415 G+D + ++++A++A A G N + + + ++ + + L LY Sbjct: 1170 DGKDADSLLKNADTAMYQAKNDGRNVYRFFTMEMQAHSSRIMQIESALRVALFDQQFELY 1229 Query: 416 QKPA-VTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLR 473 +P + G + E + R VS E++P+ Q G + I ++ Sbjct: 1230 YQPQTCAKSGSIIGVEALIRWNHPEMGPVSPQEFIPVAEQSGQILAIGWWVLRTAIRQIK 1289 Query: 474 YWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISR 528 W E +A+ ++ + + L + E + + +EL E+ + Sbjct: 1290 IWSEHGKPCIKVAVNLSAVQFRYEDLPKQVMKILEE-EGVSPEFLELELTESVAMANPEA 1348 Query: 529 LQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQS 588 + ++ + G++++++ G S S++K V LK+ +R++ ++++ ++++ Sbjct: 1349 VIEMMDKLVGHGIKMSIDDFGTGYSSLSYLKRFKVSKLKIDQSFIRDLAVDSDDRSIIEA 1408 Query: 589 LVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFAS---SQPLDTNVKKYSQR 643 ++ + A GV ++++ L ++ QG +++ + D +K SQ+ Sbjct: 1409 IISLSKALGLKTIAEGVETQAQLDFLQEKQCDEIQGFYYSKALTPEAFDAFYEKQSQK 1466 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 573 bits (1478), Expect = e-162, Method: Composition-based stats. Identities = 96/449 (21%), Positives = 191/449 (42%), Gaps = 16/449 (3%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 L +I +E +R IR A D TGL NR D++L L ++ VM Sbjct: 410 ALFTDISRLKETEAR----IRDLAYYDPLTGLPNRRLLDDRLQVELAHAARLRCRLAVMF 465 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LK 319 + L F ++D+ GH+ ++ + L + +AR +F +L + + Sbjct: 466 VDLDRFKRINDSLGHAVGDKLLVEIAARLRASLR--DDDTVARMGGDEFLVVLNNLSGPD 523 Query: 320 EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSG-QDTEQVMEHAESATRNAGLQG 378 EA ++A +++ + N + + +G+ + +D + +++HA+ A A +G Sbjct: 524 EAATMARRMVAELRRPVNVEGRELVVTTSVGVAVYPDDSRDADTLVKHADVAMYRAKDEG 583 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREG-QVHHRELMCRIFD 437 NS+ +++ ++ + + T + + L R +LY +P + EG ++ E + R Sbjct: 584 RNSFQLFEPAMNARSLERLALETALHRALPRDELQLYFQPVMKAEGGELVAVEALLRWRH 643 Query: 438 GN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIR 491 + VS A+++P+ GL + R W E + + ++ Sbjct: 644 PDLGLVSPADFIPLAEDTGLIVPIGEWVLRSACEHHRRWCEAGGAPLHMMVNISARQFRE 703 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 F + L + + + +EL E+ + R + + ALGV +A++ G Sbjct: 704 EGFAAMVGSVLAETGMTPGD-LTLELTESMLMDDTDRALARLDHLRALGVCLAIDDFGTG 762 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S +++K ++ LK+ VR I++ T + LV ++V +V A GV + + Sbjct: 763 YSSLAYLKRFPIDELKIDRLFVRGIDRNTRDAALVSAIVSLGHSLGLRVVAEGVETAAHL 822 Query: 612 QTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 L ++G QG F+ P + VK Y Sbjct: 823 DVLRRQGCDLAQGFHFSPPLPWEEFVKAY 851 >UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZE4_9PROT Length = 727 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 95/455 (20%), Positives = 183/455 (40%), Gaps = 21/455 (4%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 + ++ +E ++ I A D T L NR + +L + G HG V+ + Sbjct: 279 IFSDVTKRKEAEAQ----IHQLAFYDPLTELPNRRLLNERLQQAFSVGARSGHHGAVLFL 334 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL------PH 315 L +F L+DT GH ++ + L++ + G +AR +F +L P Sbjct: 335 DLDNFKTLNDTKGHDIGDQLLIEVAKRLNSCVRN--GDTVARLGGDEFVVVLESLSSVPD 392 Query: 316 RTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNA 374 +A+ +A ++ A+ IG+ +R Q E+V++ A++A A Sbjct: 393 EAATQADLVAEKIRYALSQPYQLANHVHRTTPSIGVVMFRGHQQSLEEVLKFADTAMYQA 452 Query: 375 GLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCR 434 G N+ YD + + Q++ R RLY + + + E++ R Sbjct: 453 KTAGRNAIRFYDPVMQASIEARAELEEELRQVVERNQLRLYYQVQMDSSNRPLGAEVLLR 512 Query: 435 IFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP------EENLAIQVTVE 487 VS A+++PM + G + L+ W + LA+ V+ + Sbjct: 513 WQHPERGLVSPAQFIPMAEETGHIVPIGLWVLQTACTQLKVWQSDPLTCDLTLAVNVSAK 572 Query: 488 SLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQ 547 F ++ TL Q ++ + +EL E+ V +++ +R + LGV +++ Sbjct: 573 QFRSMDFVSQVQRTLAQ-SGAKPSLLKLELTESLVLENVEDTIAKMRELKLLGVSFSMDD 631 Query: 548 AGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRS 607 G S ++K L ++ +K+ VR+I + + +VQ+++ V A GV + Sbjct: 632 FGTGYSSLQYLKRLPLDQIKIDQSFVRDIASDSNDAAIVQTIIAMSEVLGLNVIAEGVET 691 Query: 608 RSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 ++ + L RG QG F PL + Sbjct: 692 EAQREFLDLRGCHAFQGYLFGRPAPLAEFEAILRK 726 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 87/487 (17%), Positives = 199/487 (40%), Gaps = 17/487 (3%) Query: 167 LLETRATRILNGERGSNVLGTI-YEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAA 225 L ETR + + + V+ + + P AL + +I + R R + A Sbjct: 383 LRETRELSLCHRDGAELVVEAMATQVPHGDDQALCLMFHDITDRR----RFQEELLHQAT 438 Query: 226 QDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTL 285 D TGL NR +++L + + G ++M L +F +++DT GH+ ++ ++ Sbjct: 439 HDTLTGLPNRSLLEDRLNQAVAGARRRGQMVALLMFDLDNFKVVNDTLGHTAGDQLLRSV 498 Query: 286 TNLLSTFMMRYPGALLARYHRSDFAALLPHRTL-KEAESIAGQLIKAVDTLPNNKMLDRD 344 + +F+ AR +F +L + T +A ++A + + Sbjct: 499 AARIRSFVRNC--DTFARLGGDEFVIVLTNLTRMDDAVTVAESFRNLLAMPFFLGGREIF 556 Query: 345 DMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLI 403 +GI + G E +++ A++A + G NS+ + + + +K + T + Sbjct: 557 ITASMGISLFPDDGDTMEALIKKADTAMYHIKESGRNSFQFFAEEMNQKVNARLTIETGL 616 Query: 404 EQMLSRGGPRLYQKPAV-TREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYD 461 + L +G L+ +P + G V E + R + +S A+++P+ GL E Sbjct: 617 RRALEKGEMLLHYQPRLEPGTGAVVGMEALVRWNSPDMGLISPADFIPIAEDSGLIVEIG 676 Query: 462 RLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIE 516 ++ W +++ ++ + F + + Q + +E Sbjct: 677 DWVLATACCQALEWHRMGHDSLRVSVNISARQFVGHDFVDRVVRIIEQ-SGLSPHFVELE 735 Query: 517 LAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNI 576 L E + ++ ++ + G+ ++++ G S +++K V++LK+ + ++ Sbjct: 736 LTETALTHNVDETVKIMNRLRERGITISIDDFGTGYSSLNYLKRFPVDVLKIDKSFIDDM 795 Query: 577 EKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTN 636 KR E+ +V +++ +V A GV + + + L++ QG +F+ P + Sbjct: 796 VKRREDAAIVATIIGIAHHMHMKVVAEGVETAEQMKLLMEGNCEEIQGFYFSRPLPPEEF 855 Query: 637 VKKYSQR 643 + + R Sbjct: 856 ERYIAGR 862 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 94/487 (19%), Positives = 192/487 (39%), Gaps = 12/487 (2%) Query: 159 QRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDT 218 Q + + L R +++ + G ++P + L I + + + Sbjct: 89 QTVIQSGQPLINREEPVVDRQSGRIRWLLTSKFPVFNDTGKTIGLVGIGRDITERKQSEE 148 Query: 219 LIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQV 278 I+ A D T L NR F LA +E + V+ I L F ++DT GH Sbjct: 149 QIQYLATHDSLTALPNRFMFSKLLAVAIESARRHQRQLAVLFIDLDRFKNINDTLGHDAG 208 Query: 279 EEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPN 337 ++ T+ N T + ++ R +F LLP + +A +A +++ A + Sbjct: 209 DQLLITMANRFRTCLR--TSDIVGRLGGDEFVILLPELESHDQAARVAQKILSAAIQPLD 266 Query: 338 NKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGN 396 + IGIC + +D + +M++A+ A A +G N++ Y L + Sbjct: 267 VHGQECRVTASIGICLYPEDAEDEQALMKNADIAMYRAKEEGKNNYQFYSPDLKVRSLER 326 Query: 397 VRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQF 454 + + + L R L+ + + G++ E + R +S A ++P+ + Sbjct: 327 LMLENNLRKALERHEFFLHYQAKRNLKTGKIAGVEALVRWQHPELGTISPAHFIPLAEET 386 Query: 455 GLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQ 509 GL R + W ++ L A+ ++ + + L + Sbjct: 387 GLIVHLGRWVLRAACTQGVIWQQQGLPPICIAVNLSARQFFDDNLINDIANALRE-SGLA 445 Query: 510 RKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLH 569 + + +E+ E + Q R ++ + ALGVR+A++ G+ S + IK ++ LK+ Sbjct: 446 PELLEMEITEGMIMQDAERAIRILTGIKALGVRLAIDDFGVGYSSLAHIKRFPIDTLKVD 505 Query: 570 PGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFAS 629 +R+I E++ + ++++ S V A GV ++ + L QG +F+ Sbjct: 506 SSFIRDIPANREDRAITEAIIAMGKTLSLTVIAEGVETQEQENFLRDSACDQTQGYYFSK 565 Query: 630 SQPLDTN 636 + Sbjct: 566 PVSPEEF 572 >UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47UD6_COLP3 Length = 921 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 94/543 (17%), Positives = 219/543 (40%), Gaps = 14/543 (2%) Query: 111 LIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIV--MLFLAVRWLQRQLAGQELL 168 ++ P M L+ + +GFI L + + + QL Sbjct: 364 VVVTPQMVAINSASKVSNLILMLLIAIMIIAAFLGFIYCRRSLIMPIYQMVNQLQRPVTE 423 Query: 169 ETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDV 228 + L +R + G + ++ ALD+ R+++ + + + ++ A D Sbjct: 424 GGQVYPELLDDRRQDEFGLLAYHFNQSKMALDSNNRDLKLQINERKQAEYQLKHLALHDP 483 Query: 229 KTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNL 288 TGL NRL F ++L + ++ V + L +F +++DT GH +E ++ Sbjct: 484 LTGLPNRLLFQDRLEQAIALSDRHQHKFAVFFMDLDNFKIINDTMGHDAGDELLKQVSLR 543 Query: 289 LSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMI 347 LS + +AR +FA ++ T+++A + A +L + T + + Sbjct: 544 LSCTGRKT--DTVARLGGDEFAFIITKVNTIEDAVTFAQRLNSLLKTPIEINGNNINMGS 601 Query: 348 HIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQM 406 IGI + ++E+++ +A+ A A G N+ + + + + N T + + Sbjct: 602 SIGITIYPDDAANSEELLRNADIAMYQAKDDGRNTVRFFTSEMNARLQRNKEVLTDLAES 661 Query: 407 LSRGGPRLYQKPAVTREGQV-HHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQ 464 L++ LY +P T + + E + R + +++ + + GL E Sbjct: 662 LTKEHFELYYQPLFTIDQNILVGAEALIRWHHPEKGMIPPDQFIAVAEKSGLINELGDWV 721 Query: 465 ISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAE 519 +++ ++ + + AI ++ R + + L Q + S + I +E+ E Sbjct: 722 LAQACREIKNFLNAGITVFKVAINISPVQFRRKDLLQHMLMILAQHDVS-AELIELEITE 780 Query: 520 ADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKR 579 V ++ + ++ ++ G ++A++ G S S++K ++ +K+ + ++E Sbjct: 781 GAVMDNVDQAIETMQALHDAGFQLAMDDFGTGYSSLSYLKRFPIQKVKIDRSFISDLEND 840 Query: 580 TENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKK 639 +++ + ++++ V A GV + + L QG + P +K Sbjct: 841 DDSKSITTAIIQMSHSLGLHVLAEGVETEEQLHYLQAEKCDYVQGYYTGRPIPASEFIKN 900 Query: 640 YSQ 642 +S+ Sbjct: 901 FSE 903 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 571 bits (1472), Expect = e-161, Method: Composition-based stats. Identities = 77/450 (17%), Positives = 190/450 (42%), Gaps = 16/450 (3%) Query: 203 LREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIR 262 L++I +++ D ++ + D TGL NR F ++L L ++ ++++ Sbjct: 409 LKDITEIKKK----DEILYNMEYYDPLTGLPNRSLFSDRLKMALAQSKRNNEMCALIILD 464 Query: 263 LPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEA 321 L +F ++DT GHS + + + ++ +AR +F + P + +A Sbjct: 465 LDNFKAINDTLGHSVGDMLLKQVAEKIKGYLREV--DTVARIGGDEFIIIQPQIKDINDA 522 Query: 322 ESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSG-QDTEQVMEHAESATRNAGLQGGN 380 A +++K + + +GI + +G +D + + ++A++A A G N Sbjct: 523 TRAADRILKKFQQPWILEGKEYYITASMGIGIYPNGGEDPQTIFKNADTALYRAKELGRN 582 Query: 381 SWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN 439 ++ +Y +S+ +K + + + + + L+ +P + + G++ E + R + + Sbjct: 583 NYQLYTESMNQKVLQRLDIENSLRRAIEKEEFVLFYQPQIDIKTGKIVGFEALLRWYHPD 642 Query: 440 -EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPR 493 + E++P+ GL + + W E L ++ ++ R Sbjct: 643 YGLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIECGLEPHLISVNLSARQFQRSN 702 Query: 494 FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLV 553 + D + + + +E+ E+ Q +S V+ + G+RV+++ G Sbjct: 703 IVE-VIDRIRSSTGLAPELLELEITESTAMQDLSFTIDVLNQLRKKGIRVSLDDFGTGYS 761 Query: 554 STSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQT 613 S +++++L ++ LK+ V++I ++ + + ++++ V A GV ++ + Sbjct: 762 SLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLAHKLDLTVVAEGVETKEQLLF 821 Query: 614 LIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 L + QG F+ P + K + Sbjct: 822 LKKEKCDKAQGYLFSKPLPAEEIEKMLRDK 851 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 571 bits (1472), Expect = e-161, Method: Composition-based stats. Identities = 107/514 (20%), Positives = 204/514 (39%), Gaps = 31/514 (6%) Query: 139 PLTGAIGFIIVMLFLAVRW-LQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSS 197 P A G I +++ ++ R +QRQLAG + R E Sbjct: 263 PSNVAQGSIWIVMDVSERLRIQRQLAGMHGELEQQVRDRTRE---------------LQE 307 Query: 198 ALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGI 257 + L REIQ+ + R I A D T L NR+ + + ++ G Sbjct: 308 TVGNLHREIQDRQRDQER----IYWMAHYDALTELPNRVLLAERGQDAIRQAQESGAPLA 363 Query: 258 VMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT 317 VM + L +F ++D+ GH + + L T + + +AR +F LLP Sbjct: 364 VMFLDLDNFKHVNDSLGHRIGDALLVEIAQRLRTTVRQR--DTVARLGGDEFVLLLPGAN 421 Query: 318 LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGL 376 + A +A ++ +A + + + + +GI + G D E +++ A++A A Sbjct: 422 AQGAARVAAKMQEAALQPVHIQHHELSLALSMGIALFPEHGSDFETLIQSADTAMYRAKA 481 Query: 377 QGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRI 435 G NS+ + ++ + ++ + + L R L+ +P V+ G+V E + R Sbjct: 482 DGRNSFRFFTPTMQAQSARALQLTNALRRALERNQLSLHYQPQVSIATGRVCGVEALLRW 541 Query: 436 FDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESL 489 VS AE++P+ G + + LR W + L A+ ++ Sbjct: 542 HHPELGAVSPAEFIPVAEDTGQILPIGEWVLRTALAQLRTWHSQGLPALTMAVNLSAVQF 601 Query: 490 IRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAG 549 +P+ L D L+ Q + +EL E + ++A GVR++++ G Sbjct: 602 RQPQLLE-LVDRLLAEYGVQPHLLELELTENVAVADPHAAIATMDQLHAKGVRLSMDDFG 660 Query: 550 LTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRS 609 S S +K + LK+ VR+++ ++ +V +++ + A GV + Sbjct: 661 TGYSSLSHLKRFQIYRLKIDQSFVRDLDHDGNDRAIVSAIIRMAQALGMRTTAEGVETAH 720 Query: 610 EWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 + L ++G QG +F+ + QR Sbjct: 721 QLTFLREQGCDEAQGFYFSRPLGAPHLQQYLLQR 754 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 571 bits (1472), Expect = e-161, Method: Composition-based stats. Identities = 94/453 (20%), Positives = 182/453 (40%), Gaps = 15/453 (3%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 + +I ++ +L+ A D TGL NR +L LE + VM I Sbjct: 437 VFNDISQLKDSQEQLE----RLAHYDPLTGLPNRHLALARLEHALERARRHAFPLAVMFI 492 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA 321 L F ++D+ GH +E + L + + LAR +F ++ +++ Sbjct: 493 DLDRFKTINDSLGHQAGDELLVAIAQRLHQRLRQE--DTLARLGGDEFLVVIEEAPVQQV 550 Query: 322 ESIAGQLIKAVDTLP-NNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGG 379 SIA L+K VD + + IGI + G+ +++ +A++A A QG Sbjct: 551 ASIAHALLKVVDQPFGFSGGGEAYVGASIGISLYPGDGRSASELIRNADAAMYLAKAQGS 610 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG 438 N++ Y +SL + T + + L L+ +P V G+V E++ R Sbjct: 611 NAYRFYTESLTRAANERLSMETSLRRALRCEEFVLHYQPLVELASGRVLGAEVLVRWQPP 670 Query: 439 NE-EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL----AIQVTVESLIRPR 493 E V + ++P+ + GL + + W + L A+ ++ +R Sbjct: 671 GEALVPPSRFIPLAEETGLIVPLGDWVLHEACRQGKAWLDAGLPLLLAVNLSPRQFLRHD 730 Query: 494 FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLV 553 +R L Q ++ +EL E + + + + + LGV +A++ G Sbjct: 731 LVGQVRKAL-QGSGLPPAQLELELTEGALMEQAEQAVKTLHALKRLGVSLAIDDFGTGYS 789 Query: 554 STSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQT 613 S +++K ++ LK+ VR++ + + + +V +++ + A GV + + Sbjct: 790 SLAYLKRFPLDKLKIDRSFVRDLPRDSSDAEIVTTIIAMVRNLKLEALAEGVETPQQLAF 849 Query: 614 LIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV 646 L Q G GQG F+ P + + V Sbjct: 850 LRQLGCDSGQGYLFSPPLPAEAFERWLRDGRGV 882 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 571 bits (1472), Expect = e-161, Method: Composition-based stats. Identities = 87/456 (19%), Positives = 172/456 (37%), Gaps = 16/456 (3%) Query: 188 IYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLE 247 + + R + + +I R + I+ A D TGL NR +L + Sbjct: 352 VRDPETREITHFIAIFSDIT----ARKRAEADIQHLAYHDTLTGLANRFSLTARLQLSVA 407 Query: 248 DQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRS 307 + + G VM + L F ++D+ GH +E + L + +AR Sbjct: 408 EARRNGQRLAVMFLDLDRFKHINDSLGHPVGDELLKQVARRLRDAVRET--DTVARLGGD 465 Query: 308 DFAALLPHRT-LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVME 365 +F +L + +A +L+ + + IGI + D +M Sbjct: 466 EFVVVLQGIGGAHDVTHVAAKLLAQLSAPYCVDTTELHTTASIGISLFPDDSADPAALMR 525 Query: 366 HAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REG 424 +A++A +A G + Y D + + + ++RG L+ +P R G Sbjct: 526 NADTAMYHAKAAGRAKFQFYTDEMNRAATARLDLERKLRGAVARGEFELWYQPQFDSRHG 585 Query: 425 QVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW-----PEE 478 + E + R + ++ ++P+ + G+ E + R W PE Sbjct: 586 HLTGLEALVRWRHPQDGLIAPLRFIPLAEETGVIVEIGTWVLREACRQARQWLDAGLPEL 645 Query: 479 NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNA 538 +++ ++V L + TL + + +E+ E+ V + +++ + Sbjct: 646 RISVNLSVRQLREKCLVDTVWTTLA-ASGLRPGLLELEITESAVMDNPDEAVALLQALKN 704 Query: 539 LGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTST 598 LGVR+A++ G S S++K ++ LK+ + +IE + ++V + V Sbjct: 705 LGVRIAIDDFGTGHSSLSYLKLFPLDHLKIDRSFISDIEHDANDTMIVAAAVSLAHNLGL 764 Query: 599 QVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLD 634 V A GV S + L + G QG F+ D Sbjct: 765 SVIAEGVESAVQVARLRELGCDELQGFHFSRPVTAD 800 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 570 bits (1471), Expect = e-161, Method: Composition-based stats. Identities = 83/456 (18%), Positives = 184/456 (40%), Gaps = 21/456 (4%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 L +I ++ + IR+ A D T L NR ++L L + G G ++ Sbjct: 562 ATLMDITASKAS----EEEIRNLAFFDPLTRLPNRRLLQDRLQQALASCGRSGKSGAILF 617 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT--- 317 I L +F L+DT GH + + LS+ + G +AR +F +L + Sbjct: 618 IDLDNFKNLNDTLGHDIGDLLLEKVAIRLSSCVRE--GDTVARIGGDEFVVMLEDLSDNI 675 Query: 318 ---LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRN 373 ++ ES+ +++ +++ + D+ IG + +++++ A+ A Sbjct: 676 LDAAEQTESVGSKILASLNVPYQLGIHTYDNSPSIGATLFNDNHNSIDELLKQADIAMYQ 735 Query: 374 AGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMC 433 A G N+ +D + + + + + + + +LY + V + E + Sbjct: 736 AKKAGRNTMRFFDPRMQQSLSARLALELELRKAIEKDQFQLYYQIQVDETHRPLGAEALL 795 Query: 434 RIFDGNEEV-SSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL------AIQVTV 486 R + + AE++PM + GL + L+ W ++ L +I V+ Sbjct: 796 RWMHPEHGLMAPAEFIPMAEETGLIVPIGWWVLETACTQLKAWEKDPLTRNLVLSINVSA 855 Query: 487 ESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVN 546 + +P F ++ + + +EL E+ + +++ + + GV +++ Sbjct: 856 KQFHQPDFVDQVQAAV-DHYGIDPALLKLELTESILLENVDTTIKRMSALKKTGVGFSLD 914 Query: 547 QAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVR 606 G S ++K L ++ LK+ ++ I + + +V +++ V A GV Sbjct: 915 DFGTGYSSLQYLKRLPLDQLKIDQSFMQEITSDSSDMAIVSTIIAMAQSMQMGVIAEGVE 974 Query: 607 SRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 + + Q L+++G QG F+ P++ K + Sbjct: 975 TEEQRQLLLRKGCNHFQGYLFSKPVPVEQFEKLLHR 1010 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 570 bits (1471), Expect = e-161, Method: Composition-based stats. Identities = 93/453 (20%), Positives = 187/453 (41%), Gaps = 15/453 (3%) Query: 199 LDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIV 258 L + ++ + +E + I YA D TGL NR +L + + V Sbjct: 572 LVGTVNDVTDQKEN----EEQIERYAHFDALTGLANRHALYRRLGQAITSVHQHQHPLAV 627 Query: 259 MMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL 318 + + L F ++DT GH+ + + LS F P +LAR +F +LP Sbjct: 628 LFVDLDKFKTINDTLGHAVGDVVLREVAGRLSDFAG--PDDILARLGGDEFLLVLPGADE 685 Query: 319 KEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQ 377 + A +A ++ A+ + IG+ + G++ + ++ +A+ A A + Sbjct: 686 RAASEVAACILTAMSVPVRVDGRELPTTPTIGVSLYPRDGEEADDLIRNADIAMYQAKAR 745 Query: 378 GGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIF 436 G N++ +Y + ++ + + RG L+ +P + +G V E + R Sbjct: 746 GRNTFQLYTPDMNAAAAERLQLQGELRNAHLRGEIMLHYQPQIDVTDGHVVGCEALMRWK 805 Query: 437 DGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLI 490 VS ++P+ + GL I W L A+ ++ Sbjct: 806 HPTLGMVSPGRFIPLAEESGLIITLGNWAIREACRQAMVWQRAGLPPLTVAVNLSGCQFQ 865 Query: 491 RPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGL 550 + F + D L + + +EL E+ V + ++ + + ALGV+++++ G Sbjct: 866 QSNFTAVVADALADTS-LPPQYLELELTESIVMHDVEQVIATLTELKALGVQLSIDDFGT 924 Query: 551 TLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSE 610 S +++K V+LLK+ G VR++E + +V++++ + ++ A GV ++ + Sbjct: 925 GYSSLNYLKRFPVDLLKIDQGFVRDVETDPSDAAIVRAIIALGKILNLRLIAEGVETQGQ 984 Query: 611 WQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 L GV QG +F+ P + +QR Sbjct: 985 LDYLHAAGVDFIQGYYFSRPLPAEDMATYLAQR 1017 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 570 bits (1471), Expect = e-161, Method: Composition-based stats. Identities = 98/472 (20%), Positives = 193/472 (40%), Gaps = 12/472 (2%) Query: 181 GSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDN 240 GS P R + T ++ Q + + A D TGL NRL ++ Sbjct: 330 GSLFWEYATISPIRDDDGVVTHFMAVKENITQRKETEQQLVHQATHDTLTGLPNRLLLED 389 Query: 241 QLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGAL 300 ++ +E ++ G +M + L F +++D+ GH +E +++ L + R Sbjct: 390 RVHHAIEVAKREGRRIGLMFLDLDRFKIVNDSLGHVAGDELLKVVSDRLRHTLRR--SDT 447 Query: 301 LARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQ 358 +AR +F +L H ++ E +A ++ A+D IGI + G Sbjct: 448 VARLGGDEFVVVLTHFQSTTELAEVAEKISAALDEPVELSGHKVHVGASIGIAIYPDDGD 507 Query: 359 DTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKP 418 + +M+ A++A A +G N++ YD ++ ++ ++ + + L RG +L+ +P Sbjct: 508 NFNALMKDADTAMYRAKQKGRNTFCFYDSNMNDEALDRLKLEEALRRALVRGEFQLFYQP 567 Query: 419 AVT-REGQVHHRELMCRIFDGNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP 476 V + G+ E + R VS A ++P+ + L + + W Sbjct: 568 QVDLQTGRTSGVEALIRWNSPERGQVSPALFIPVAEESNLISMIGWWVLEESCRQIAAWR 627 Query: 477 EENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQP 531 E L A+ V+ + + D + Q ++ IEL E+ V R Sbjct: 628 EAGLTGIKVAVNVSGRQFLNHALVECISDLMAQYAVLP-SQLEIELTESTVMAEPDRAIE 686 Query: 532 VIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVE 591 + + +G++V+V+ G S S++K L + +K+ VR++ +++N +V +++ Sbjct: 687 QLTRLREIGIQVSVDDFGTGYSSLSYLKRLPLSTIKVDRSFVRDVNNQSDNAAIVSAILG 746 Query: 592 ACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 + A GV + E Q L G QG +A P D ++ Sbjct: 747 LADALDMSIVAEGVETEGEEQHLKDAGCIKVQGFRYAKPMPADQLAAWMLRQ 798 >UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=cellular organisms RepID=B0CAC5_ACAM1 Length = 901 Score = 570 bits (1471), Expect = e-161, Method: Composition-based stats. Identities = 115/624 (18%), Positives = 247/624 (39%), Gaps = 25/624 (4%) Query: 32 NAIQYKFSHRVQAVATAIDTHLVSNDFSVLRPQITELMMSADIVRVDLLHGDKQVYTLAR 91 A K +Q+VA A L + + + + L +A + R+ + +TL Sbjct: 265 EAELRKRDRLLQSVAQATTHLLENVGYDAIDTALAILGEAAGVDRICICKN----HTLPD 320 Query: 92 NGSYRPVGSSDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFI--IV 149 G + R + P + + + ++H+L + + + I Sbjct: 321 TGESGTSMRFEWVRSSIESVRHRPHRQEQSYHSPHLRRWYHALTDEVTIRSLVQDLPEIE 380 Query: 150 MLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNA 209 LA + L ++ R G + Y W + S L + I A Sbjct: 381 QQVLAQDSILSILVVPIIVNHR----FWGFIELHNCTREYHWSLQEESILFAMSASISAA 436 Query: 210 REQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNML 269 ++ + + +IR A D T L NR+ F+++L L ++ VM + L F ++ Sbjct: 437 LQRQDK-EEIIRHQAFHDALTDLPNRVLFNDRLNIALASAQRNNGSVAVMFMDLDRFKLI 495 Query: 270 SDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQL 328 +DT GHS +E + L + G +AR+ +F LLP ++ +A + A ++ Sbjct: 496 NDTLGHSIGDELLKEVALRLQDCLR--DGDTVARWGGDEFTVLLPKIESVNDAINTAYRI 553 Query: 329 IKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDD 387 + A+ + + IGI + GQ+ E ++++A+ A + QG + +Y+ Sbjct: 554 LDALKAAFVIRRHELFVTTSIGIAIYPEDGQEAEILLQNADVALYRSKEQGRGTCQLYNP 613 Query: 388 SLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSA 445 ++ + + L R L+ +P V G++ E + R VS A Sbjct: 614 TMN--AKEQFILENSLRHALDRDEFILHYQPKVNICTGEIVGLEALVRWEHPEMGLVSPA 671 Query: 446 EYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLA-----IQVTVESLIRPRFQRWLRD 500 ++P+ + GL E + W + LA I ++ +P + Sbjct: 672 TFIPIAEETGLIVELGEWVLRTACQQAVLWHKLGLAPLSVAINLSARQFYQPNLVEIVAQ 731 Query: 501 TLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKE 560 + + +++ +E+ E +++ + ++ + ALGV +A++ G S +++K+ Sbjct: 732 VI-ESTGLNPQQLELEITETIAVKNMEFAKSILCNLQALGVHIAMDDFGTGYSSLNYLKQ 790 Query: 561 LNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVT 620 L LK+ +++++ +++ ++ +++ G +V A GV + + + L Sbjct: 791 LPFNTLKIDQSFIQDLKPASKDVEIINAVIALGKGLDLKVVAEGVDNEEQLELLRSLNCE 850 Query: 621 GGQGDFFASSQPLDTNVKKYSQRY 644 QG F+ +D+ + Sbjct: 851 IVQGYLFSRPLSVDSTTDILQANW 874 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 570 bits (1470), Expect = e-161, Method: Composition-based stats. Identities = 91/463 (19%), Positives = 188/463 (40%), Gaps = 15/463 (3%) Query: 192 PPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEK 251 P +++ ++ +I + R + IR + D TGL NR +F +L L+E + Sbjct: 506 PDGSTTHYVSIFTDISEFK----RAEAQIRYLSYHDDLTGLPNRAYFQARLDQLIEAAAR 561 Query: 252 VGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAA 311 ++++ L F ++D+ GHS +E + + + G +AR +F Sbjct: 562 DRKQIALVVLDLDRFKTINDSLGHSVGDELLCQVAERIQDCTGQ--GDFVARQGGDEFVV 619 Query: 312 LLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESA 370 +L A +A +I A+ +GI + D+E +++ A++A Sbjct: 620 ILADSDAVRAARVANAMISAIAKPAVAGGRTLIVTPSLGISLYPHDAGDSESLIKSADAA 679 Query: 371 TRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHR 429 +A G N++ + + + + Q LS G RLY +P + ++ Sbjct: 680 MYHAKSLGRNTYQFFSAEMSAVATERLALENALHQALSNGEFRLYYQPQIEVCSRRLIGL 739 Query: 430 ELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQ 483 E + R V ++P+ + G+ R + R W L A+ Sbjct: 740 EALIRWRHPEVGWVPPLRFIPLAEETGIIHRIGRWVLEEACRQQREWQAAGLCIVPVAVN 799 Query: 484 VTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRV 543 ++ L + F + L C + + +EL E V + + R+ ++R + G R Sbjct: 800 LSPLQLQKDDFPEQVEALLSGC-RLAPGLLELELTETAVMRDVGRMSDMLRKLKERGTRF 858 Query: 544 AVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYAT 603 +++ G S ++ V+ LK+ +R++ +R ++ + ++++ +V A Sbjct: 859 SIDDFGTGYSSLGYLNRFPVDKLKIDQSFIRDVTRREDHAAITRAIIALAKQLHLKVVAE 918 Query: 604 GVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV 646 GV + + + L + G G QG +F+ P D S+ +V Sbjct: 919 GVETAEQLEFLERAGCDGAQGFYFSRPVPADEIAGWLSREGAV 961 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 570 bits (1470), Expect = e-161, Method: Composition-based stats. Identities = 92/447 (20%), Positives = 185/447 (41%), Gaps = 17/447 (3%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 ++ +I ++ +RL+ D T L NR ++L LE ++ G V+ + Sbjct: 620 VMTDISQLKQSEARLE----HLVHYDPLTNLPNRRLVQSRLEHALERADRQGGRVAVLFV 675 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL-KE 320 L F ++D+ GH + L LS + LAR +F LL + ++ Sbjct: 676 DLDRFKTVNDSLGHPSGDVLLELLARRLSERVRE--DDTLARLGGDEFLVLLENLQRPED 733 Query: 321 AESIAGQLIKAVDTLPN-NKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQG 378 A ++A L+ + + + IGI + G +++HA+ A A +G Sbjct: 734 AAAVAESLLSLLQQPFHLPNGQELYVGASIGISLYPDDGHTVTDLIQHADVAMYQAKEEG 793 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFD 437 N++ Y SL + R + + + L+ L+ + + R+G++ E + R Sbjct: 794 RNTYRFYTPSLTQTARERLGLEARLHRALASEEFVLHYQAQIDMRDGRLIGCEALVRWHS 853 Query: 438 G-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIR 491 V+ ++P+ + GL + + + W L A+ ++ L Sbjct: 854 ATEGLVAPDRFIPLAEETGLIVPLGEWVLRQACADCQSWRARGLTDLTVAVNLSGRQLRS 913 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 P + L + +R+ +EL E+ + + +R + ALGVR++++ G Sbjct: 914 PDLVERVTRVLRET-GLPAERLKLELTESMIMDQREQALERLRALKALGVRLSIDDFGTG 972 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S +++K L ++ LK+ VR+I + + + + +++ V A GV + + Sbjct: 973 YSSLAYLKRLPIDELKIDRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEGVETPEQC 1032 Query: 612 QTLIQRGVTGGQGDFFASSQPLDTNVK 638 LI++G T GQG F P + + Sbjct: 1033 DFLIRQGCTAGQGYLFGRPLPAEAFAQ 1059 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 570 bits (1470), Expect = e-161, Method: Composition-based stats. Identities = 91/498 (18%), Positives = 194/498 (38%), Gaps = 17/498 (3%) Query: 159 QRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDT-----LLREIQNAREQH 213 QR+L + L+ R G + S ++ A + Sbjct: 205 QRRLEFKRLMAKHGVVTNFESRVHRRNGEVIWISENARSVYNSDGTLLFFEGTVEAITER 264 Query: 214 SRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTW 273 + I+ A D TGL NR +++ + E+ G + + L F ++D+ Sbjct: 265 KLHEAEIQFQATHDALTGLPNRTLLYDRMQQAVLHSERYGKLTAIAFLDLDQFKFINDSL 324 Query: 274 GHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA-ESIAGQLIKAV 332 GH +E L++ + +AR +F LL + +EA +++ V Sbjct: 325 GHQVGDELLKITAQRLTSCLRE--SDTVARQGGDEFVLLLTDQPNEEAITHTMQRVLHEV 382 Query: 333 DTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPE 391 L+ IG+ G+D E ++++A+SA A G N++ + + Sbjct: 383 SQPWKANDLEFQITCSIGLTLCPDDGRDAETLLKNADSAMYKAKELGRNNFQYFSAEMNS 442 Query: 392 KGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFD-GNEEVSSAEYMP 449 + + Q ++ L+ +P V+ Q+ E + R + VS A ++P Sbjct: 443 SVTDRLELLNRLRQAITNEDFVLHYQPKVSLASHQIIGAEALVRWNSAHSGMVSPASFIP 502 Query: 450 MVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQ 504 + + GL + R W + +++ ++ L R + L + Sbjct: 503 LAEETGLIIPLGEWVLRTACRQNRAWQDAGYPPIPISVNLSPRQLARGDIVEVVERILTE 562 Query: 505 CEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVE 564 + + + +E+ E+ + + + ++ + +LGV+++++ G S S++K V+ Sbjct: 563 T-GLEAQHLELEITESVMTTDVEKSFALLTQLRSLGVKISLDDFGTGYSSLSYLKRFPVD 621 Query: 565 LLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 LK+ VR+I ++ +V++++ + V A G+ + ++Q L+ G GQG Sbjct: 622 TLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVLAEGIETEDQFQFLLANGCDEGQG 681 Query: 625 DFFASSQPLDTNVKKYSQ 642 + P V +Q Sbjct: 682 YLMSKPVPNKNFVDLLTQ 699 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 570 bits (1469), Expect = e-161, Method: Composition-based stats. Identities = 86/459 (18%), Positives = 185/459 (40%), Gaps = 21/459 (4%) Query: 198 ALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGI 257 L +R+I + + ++ I A D TGL NR ++L L + HG Sbjct: 679 VLQATVRDIT----ERKKSESEIVRLAFYDPLTGLPNRRLLMDRLQHALTSNLRNDKHGA 734 Query: 258 VMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT 317 ++ I L +F L+DT GH+ + + L + +AR +F LL + + Sbjct: 735 ILFIDLDNFKSLNDTKGHAVGDLLLVEVAQRLKGCVREE--DTVARLGGDEFVVLLDNLS 792 Query: 318 L------KEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESA 370 + +A ++++A++ + + IG+ + +++++ A+SA Sbjct: 793 HGHDNAGAHTKRVAEKILQALNLSYMLQGYEYHSSPSIGVALFCADASSPDELLKRADSA 852 Query: 371 TRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRE 430 + G N+ YD+ + L + LY + V + Q E Sbjct: 853 MYQSKAAGRNTVRFYDERTQALLLARAELEHALHHALEQQQLMLYYQVQVNADYQPVGAE 912 Query: 431 LMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW------PEENLAIQ 483 ++ R F +S A+++P+ + G+ + + L+ W + LA+ Sbjct: 913 VLLRWFHPVLGMISPAQFIPLAEESGMIIPIGYWVLEQACDQLKRWASDVFKCDLVLAVN 972 Query: 484 VTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRV 543 V++ F + + L+ R+ +E+ E+ + + + ++ + +G+ Sbjct: 973 VSIRQFHEADFAQKV-QALVTDSGISPDRLKLEITESMLVHDVENIIATMQQLKKIGLNF 1031 Query: 544 AVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYAT 603 +++ G S S IK L ++ LK+ VR+I ++ +V++++ + A Sbjct: 1032 SMDDFGTGYSSLSSIKRLPLDQLKIDQSFVRDIGHDEHDKAIVRTIIAMAQSMKLNIIAE 1091 Query: 604 GVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 G+ + + + L +G T QG F+ PL S+ Sbjct: 1092 GIETEQQRRLLALKGCTNYQGYLFSKPVPLSDFEGLLSR 1130 >UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K2_9PROT Length = 925 Score = 570 bits (1469), Expect = e-161, Method: Composition-based stats. Identities = 87/444 (19%), Positives = 177/444 (39%), Gaps = 17/444 (3%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + + I S A D TGL NR ++L L + G +G ++ I L F L+D Sbjct: 476 ERKMAEEKIISLAFYDTLTGLPNRRLLLDRLNYALASGLRTGKNGALLFIDLDKFKTLND 535 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIA------ 325 T GH + + + L + +AR +F +L ++ E+ A Sbjct: 536 TLGHDIGDLLLKQVAHRLKACVREI--DTVARIGGDEFVVMLEDLNIESVEAAAQTEVIG 593 Query: 326 GQLIKAVDTLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAI 384 +++ A+ + + IGI + +GQ ++ ++ A+ A A G N Sbjct: 594 EKILAALRMPYQLLTNEFHSSVSIGISLFSNNGQSQDEPLKQADIAMYQAKKSGRNKLRF 653 Query: 385 YDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NEEVS 443 +D + + + + L+ +L+ + V Q E++ R N +S Sbjct: 654 FDQRMQDTISSRANLEAELRKALANEQLQLHYQIQVDSAHQTIGAEVLLRWIHPVNGIIS 713 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN------LAIQVTVESLIRPRFQRW 497 A+++P+ + GL + L+ W + LAI V+ + F Sbjct: 714 PAQFVPVAEETGLILPIGLWVLETACAQLKKWQDNPATAQLILAINVSARQFHQNGFATE 773 Query: 498 LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 +R + + + + + +EL E + ++ +R + GV+ +++ G S + Sbjct: 774 VRSVIERHDINPA-LLKLELTEGMLLNNLDDTIATMRSLQEFGVQFSLDDFGTGYSSLQY 832 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 +K L + LK+ VR++ +Q +V++++ + V A GV + + Q L++ Sbjct: 833 LKRLPLAQLKIDQSFVRDLATGYNDQAIVRTIIAMAHSLNLNVIAEGVETEIQRQILLKN 892 Query: 618 GVTGGQGDFFASSQPLDTNVKKYS 641 + QG F P++ S Sbjct: 893 QCSHFQGYLFGKPMPIEQFESLLS 916 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 569 bits (1468), Expect = e-160, Method: Composition-based stats. Identities = 92/481 (19%), Positives = 198/481 (41%), Gaps = 16/481 (3%) Query: 169 ETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDV 228 E +A + ++ + E + A LL EI + R ++ A D Sbjct: 453 ERKAADVALARAHEDLELRVKERTKELAKANMDLLVEINERKMAEER----VKHMALHDA 508 Query: 229 KTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNL 288 TGL NRL + +L L D + V+ I L F +++DT GH + ++ + N Sbjct: 509 LTGLPNRLLLEERLENALSDAKSHQWQLAVLFIDLDRFKLVNDTLGHHEGDQLLVEVANR 568 Query: 289 LSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIKAVDTLPNNKMLDRDDMI 347 L + +AR +F +L E + + + + D Sbjct: 569 LHQVIG--ANDTVARLGGDEFVIVLNEIAGSTEINGVIEDIQQNFKPAVKLALQDMFVTP 626 Query: 348 HIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQM 406 IG+ + G+ Q+M++A++A +A G N ++ SL + + + + Q Sbjct: 627 SIGVAIYPEDGETPVQLMKNADAAMYHAKASGRNCAQYFNRSLDDSLKERISLENALNQA 686 Query: 407 LSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQ 464 L G LY +P + + ++ E + R +S ++P+ + GL + Sbjct: 687 LKLGQFELYYQPQLDVKSNRIIGAEALIRWNHPEKGMISPDAFIPLAEESGLIVDIGSWV 746 Query: 465 ISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAE 519 + + L W ++ +++ ++ + + F R + D + + + +EL E Sbjct: 747 LHQASSQLAQWRKQGFDQLSVSVNLSALQVQKESFAREVADVIREY-GVPEACLDLELTE 805 Query: 520 ADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKR 579 + + ++ + ++ LG++++V+ G S S++K ++ LK+ V++I Sbjct: 806 SMIMRNAEETIAALDKIHNLGIQISVDDFGTGYSSLSYLKRFPLDKLKIDRSFVQDITVD 865 Query: 580 TENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKK 639 T++ ++ ++++ + QV A GV + ++ + L G QG FA P++ + Sbjct: 866 TDDAMICKTIISMAHNLNLQVIAEGVETNAQLELLRDYGCEQYQGYLFAKPLPVEQMTEH 925 Query: 640 Y 640 Sbjct: 926 L 926 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 568 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 88/449 (19%), Positives = 179/449 (39%), Gaps = 16/449 (3%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 + +I +++ R I A DV TGL NR +++ ++ V+ Sbjct: 491 AVFLDITERKKEEER----INYLANYDVLTGLPNRYLLSDRIEQAFSSAQRNNFKVAVLF 546 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL-K 319 I L F ++D+ GH + + L T + R +AR +F ALL + Sbjct: 547 IDLDYFKNINDSLGHDIGDALLKLVAARLKTCLRR--SDTIARLGGDEFVALLSELDSSE 604 Query: 320 EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQG 378 E +A ++I+++ IGIC + G+ + +++ +A+ A A G Sbjct: 605 EVIFVAEKMIESLTEKFTLGEYQLSITPSIGICIYPDDGETSVELLRNADLAMYQAKDDG 664 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFD 437 N++ Y + K ++ T + + + +Y +P V+ G++ E + R Sbjct: 665 RNNFKFYSPDMNRKALERLKLETFLRVAIVQQQLSVYYQPKVSVLSGKMTGMEALLRWQH 724 Query: 438 GN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIR 491 +S A ++P+ + GL E + + R W + +A+ ++ L + Sbjct: 725 PELGFISPAVFIPIAEETGLINEIGDWVLRQSCLQARLWQAQGYDIVPIAVNLSARQLKQ 784 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 F + L + +++E+ E+ + ++ + GVR+A++ G Sbjct: 785 DNFAARVVTILREA-GLDAHYLVLEITESMLMSTGESGLQILEQLRDDGVRLALDDFGTG 843 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S S +K L ++ LK+ VR+I + +V + + +V A GV ++ + Sbjct: 844 YSSLSRLKNLPLDSLKIDQSFVRDIVTDPNDASIVSATAVLAHALNLKVTAEGVETQEQL 903 Query: 612 QTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 + QG F+ P VK + Sbjct: 904 DFIRMLNCEEYQGYLFSRPIPASEVVKYF 932 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 568 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 90/458 (19%), Positives = 195/458 (42%), Gaps = 21/458 (4%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 + +I A+ R++ L A D T L NR F ++L L + + G +G ++ + Sbjct: 518 MFTDISVAKAASERIENL----AFFDPLTNLPNRRLFSDRLTQALVNSTRSGNYGALVFL 573 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA 321 L F L+DT GH + + LS + G +AR +F L+ + + + Sbjct: 574 DLDHFKSLNDTLGHDYGDMLLKQVALRLSNCVRE--GDSVARLGGDEFVLLVENLSANDV 631 Query: 322 ES------IAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNA 374 E+ I +++ +++ + + IGI + Q +E +++HA+ A A Sbjct: 632 EAAHQIEAIGDKILMSLNQPYQLQSHEYLSTPSIGISLFNGHQESSEDLLKHADIAMYQA 691 Query: 375 GLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCR 434 G N+ +D + E V +++ + + LY + + GQ E + R Sbjct: 692 KKAGRNTLRFFDPLMQETINMRVDLERELKKAIEQKQFELYYQVQMNSAGQPSGAEALIR 751 Query: 435 IFDGNEEV-SSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP------EENLAIQVTVE 487 + S +++P+ + GL + +++ L+ W + +LAI V+ + Sbjct: 752 WRHPERGIISPIQFIPVAEETGLITQIGEWVLNQACLQLQAWQLDQASKDFSLAINVSAK 811 Query: 488 SLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQ 547 ++P F +++++ ++ +EL E+ + +I + + + +G++ +++ Sbjct: 812 QFLQPDFANQVKNSIRSFH-IDNTKLKLELTESMLIDNIEYVIHTMNTLGEIGIQFSLDD 870 Query: 548 AGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRS 607 G S ++K L + LK+ VR++ N+ +V +++ V A GV + Sbjct: 871 FGTGYSSLQYLKMLPLSQLKIDQSFVRDLATDNSNKTIVLTIITMAHSLGLNVIAEGVET 930 Query: 608 RSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYS 645 + Q L G QG +F+ ++ +Y Q + Sbjct: 931 DEQLQLLNAHGCGNYQGYYFSEPLSINEFNHQYMQFKN 968 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 568 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 88/450 (19%), Positives = 180/450 (40%), Gaps = 21/450 (4%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 ++ +I + + + + I A D T L NR F ++L + G HG V+ + Sbjct: 483 VVTDITDKKNR----EQEIHRLAFYDPLTRLPNRRLFFDRLEQAFSASARSGQHGAVLFL 538 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK-- 319 L +F L+DT GH + L + ++R +F LL + + + Sbjct: 539 DLDNFKTLNDTRGHDVGDLLLTMAAERLQEAVR--ANDTISRQGGDEFMVLLNNLSPERH 596 Query: 320 ----EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQD-TEQVMEHAESATRNA 374 +A +A ++ A+D + + + IG+ + +++ + A++A A Sbjct: 597 AAISQAGRVAEKIRAALDQPFDLDGYEHHIGVSIGLSLFLGHDTPADELFKRADAAMYQA 656 Query: 375 GLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCR 434 G N +D + + + Q + +G +L+ +P +G++ E + R Sbjct: 657 KHAGRNQVRFFDPEMQAELEQASALVVDLRQAIWQGQFQLHYQPQTANDGRIIGAEALLR 716 Query: 435 IFDGNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE------NLAIQVTVE 487 VS +++P+ + L R + L W + LA+ V+ Sbjct: 717 WRHPERGPVSPMQFIPLAEESNLILAIGRWVLEEACGQLAAWADLPAAGNCKLAVNVSAR 776 Query: 488 SLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQ 547 +P F +R L + K + +EL E+ V ++ ++ + LG+ +++ Sbjct: 777 QFRQPEFVAEIRRILAAT-GADPKLLKLELTESIVMTELADTVSKMQELRDLGIGFSMDD 835 Query: 548 AGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRS 607 G S + +K L +E LK+ VR++ + +V++++ QV A GV + Sbjct: 836 FGTGYSSLAQLKRLPLEQLKIDRAFVRDLGSDPHDDAIVETIIAMGRTLDIQVIAEGVET 895 Query: 608 RSEWQTLIQRGVTGGQGDFFASSQPLDTNV 637 + + TL + G QG F+ P Sbjct: 896 KEQLATLARYGCDAYQGYLFSRPVPAAQFA 925 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 568 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 91/457 (19%), Positives = 194/457 (42%), Gaps = 16/457 (3%) Query: 198 ALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGI 257 + ++R+I N +E ++ I A D TGL NR F + QL ++ + +K Sbjct: 356 GVFMIVRDITNKKEYEAK----INYLAFHDSLTGLPNRRFVEQQLDQVIMEAQKTDQQVY 411 Query: 258 VMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT 317 V+ + L F +++D+ GH + + L + + + R +F +L T Sbjct: 412 VLFLDLDHFKLVNDSLGHDFGDLLLQEASLRLRECVGKK--GTVYRLGGDEFMVILTDVT 469 Query: 318 LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGL 376 +E S+A ++ + ++ + IGI + GQD +M +A++A A Sbjct: 470 EREVSSMANEINETIEQAFFIHGHELYITTSIGISRYPEDGQDRSVLMRNADAAMYAAKD 529 Query: 377 QGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRI 435 +G NS+ +Y +L + + + + + L+R L+ +P V+ + G + E + R Sbjct: 530 KGKNSFHLYVPNLEQAVNDKMNIQNELNRALARQEFLLHYQPQVSAKSGAIVGVEALIRW 589 Query: 436 FDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESL 489 + +++ + + GL + + W ++ L A+ ++ Sbjct: 590 DHPERGLLLPDQFISVAEETGLIVPIGEWVLRTACKQNKQWQDQGLKPLRVAVNLSARQF 649 Query: 490 IRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAG 549 ++ F + + + L Q + + + +E+ E+ + + R ++ + LGV VA++ G Sbjct: 650 LKQDFTQMIAEILHQT-RLAPEYLELEITESSMI-DVHRATQALKELKQLGVHVAIDDFG 707 Query: 550 LTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRS 609 S ++KE + LK+ VR++ ++ NQ +V +++ V A GV ++ Sbjct: 708 TGYSSLYYLKEFPLNRLKIDRSFVRDMIEQPSNQAIVSTIISMAHHLQMHVIAEGVETKE 767 Query: 610 EWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV 646 E L + QG F+ P + + V Sbjct: 768 ELAFLQEHLCEEVQGYLFSRPLPSEDVAFYLQAQKGV 804 >UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB1_CYAP4 Length = 884 Score = 568 bits (1465), Expect = e-160, Method: Composition-based stats. Identities = 112/613 (18%), Positives = 225/613 (36%), Gaps = 25/613 (4%) Query: 35 QYKFSHRVQAVATAIDTHLVSNDFSVLRPQITELMMSADIVRVDLLHGDKQVYTLARNGS 94 Y +QAV TA L ++DF P + +A V+ ++ Y L Sbjct: 266 LYLRDRLLQAVTTATHHLLTNSDFETAVPHALATLGAA--AEVERVYIYDNRYCLINREP 323 Query: 95 YRPVGSSDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLA 154 + +V H ++ S G + F Sbjct: 324 AMQLRFVWQADSFTVHEDNH-------RQSPAFSSFSLSHWYDHLAEGKTISGLTNSFSP 376 Query: 155 VRWLQRQLAGQELLETRATRILN---GERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 AG + L + + G G + + W + L + I A + Sbjct: 377 QEQDILNRAGIKSLLIVPILVDDQLWGCIGFDACQSSRCWSKNEEAVLAMMAVSISGAIQ 436 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + + + +IR A D+ T L NR F ++L L + + G V+ + L F ++D Sbjct: 437 RQHK-EQVIRYQAFHDLLTDLPNRALFIDRLNLALSNAHRSGEKLSVLFLDLDRFKTIND 495 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIK 330 T GHS ++ + + L+ + G +AR+ +F LLP + + A +++ Sbjct: 496 TLGHSVGDQLLKAVAHRLTHCLRE--GDTIARWGGDEFTILLPQIHQVNDVAKTAQRMLS 553 Query: 331 AVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSL 389 A++ + + + IGI + G D E +++HA+ A A G N++ + L Sbjct: 554 ALEQPFHLENHELYITPSIGIAIYDLDGHDGETLIKHADMALYQAKQLGRNTYQFFCSGL 613 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEY 447 + + L R LY +P V + G++ E + R V + Sbjct: 614 SNGAPERLNLEKSLRHALERQEFLLYYQPQVNIKTGKITGMEALLRWKHPEMGLVIPQLF 673 Query: 448 MPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTL 502 M + + GL + + W ++ L A+ ++ +P + L Sbjct: 674 MSVAEESGLIVAIGEWVLRTACAQNKTWQDQGLPPICIAVNLSARQFRQPDLTGMIARIL 733 Query: 503 MQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELN 562 + + + +E+ E Q I + V++ + +G++++++ G S + +++ Sbjct: 734 DET-GLPPQYLDLEITETTAIQDIEFTKRVLQELQDMGIQISMDDFGTGYSSLAHLQQFP 792 Query: 563 VELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGG 622 + LK+ VR++ + + +V +++ G + V A GV + + L Sbjct: 793 LNTLKIDRSFVRDVAANSRDAQIVTAVIGLARGLNLNVVAEGVENDEQLNCLESLHCEEA 852 Query: 623 QGDFFASSQPLDT 635 QG F D Sbjct: 853 QGYIFNRPLEADA 865 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 568 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 90/480 (18%), Positives = 189/480 (39%), Gaps = 12/480 (2%) Query: 171 RATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKT 230 R T + G + I R + + I N + R + + A D T Sbjct: 602 RVTLRTYHKDGQLLWNEISLASIRDAQGEVSHFIAIFNDVTERVRYEAELEQQATHDALT 661 Query: 231 GLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLS 290 GL NR ++++ + + G VM++ L F +++D+ GH+ + LS Sbjct: 662 GLANRNLLNDRMQRAIIRAARDGHAVAVMLLDLDRFKLINDSLGHAAGDALLQETARRLS 721 Query: 291 TFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAG-QLIKAVDTLPNNKMLDRDDMIHI 349 + R G +AR +F ++ + ++A + ++++++ + I Sbjct: 722 ASVRR--GDTVARLGGDEFMVVMSDMSAEDAAAALAAKVLESLAEPMLLNGREIVATGSI 779 Query: 350 GICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLS 408 G+ + G+ +++HA+ A A G N + Y + E+ + + + L Sbjct: 780 GVSLYPRDGEAAATLLKHADVAMYRAKELGRNRFQFYAPEMNERILERLELENSLRRALE 839 Query: 409 RGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQIS 466 L+ +P V+ R+G+V E + R VS A+++P+ + GL + Sbjct: 840 NDELELHYQPKVSLRDGRVIGAEALIRWRHPQLGMVSPADFIPLAEETGLIVPIGEWVVD 899 Query: 467 RLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEAD 521 LR W + L A+ V+ + L L + ++ +E+ E+ Sbjct: 900 HACRQLRAWLDAGLPQISVAVNVSARQFQHEQLTHVLARALA-AHRLPPGQLHVEVTESA 958 Query: 522 VGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTE 581 V R +R + +GVR++++ G S +++K ++ +K+ V ++ E Sbjct: 959 VMCEPERTIFTLRELKNIGVRISLDDFGTGYCSLNYLKRFPIDSIKIDRCFVTDLATSAE 1018 Query: 582 NQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 + + +V + V A GV + ++ L + G QG F+ P + + Sbjct: 1019 DAAIALMIVSLAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGFLFSRPLPAAEFARLLA 1078 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 568 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 83/445 (18%), Positives = 181/445 (40%), Gaps = 12/445 (2%) Query: 206 IQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPD 265 I + + + I A DV TGL NR ++L ++ + ++ + L Sbjct: 477 IARDTTEQTEAEKNIHFLAYYDVLTGLPNRTLLRDRLGQMIAVAHRDKHQFSLIFLDLDR 536 Query: 266 FNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIA 325 F ++D+ GHS + ++ + + G +AR +F LL A +A Sbjct: 537 FKYINDSMGHSVGDRLLQSVALRIQDCVRE--GDTVARLGGDEFIVLLREAGESAASVVA 594 Query: 326 GQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAI 384 +L+ A+ T + IGI + QD + ++++A+ A A +G N++ Sbjct: 595 QKLLIALATPYDLDGQVISTQASIGISIYPDQAQDADTLIKNADMAMYRAKEEGRNNFQF 654 Query: 385 YDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG-NEEV 442 + + + + L RG L +P G + E + R +V Sbjct: 655 FVPEMNFRVDLLFSMEKDLRLALERGELFLQYQPQADLASGTLSGVEALIRWDHPVKGQV 714 Query: 443 SSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW-----PEENLAIQVTVESLIRPRFQRW 497 S AE++P+ + G + + W + +A+ +++ L +P Sbjct: 715 SPAEFIPVAEETGQIVAIGEWVLRTACSQMAEWRKTGMHDLTIAVNLSIRQLRQPDLAEL 774 Query: 498 LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 ++ L++ + + +E+ E + + + LGV+++++ G S ++ Sbjct: 775 IKSVLLET-GLDARHLELEITEGIMMGDNQAAFRFLSEMQDLGVQLSIDDFGTGFSSLNY 833 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 +K++ V LK+ +R+IE + +++S++ + +V A GV ++ + L R Sbjct: 834 LKQMPVNKLKIDQSFIRDIETDEGDAAIIRSIISLGHRLNLRVIAEGVETQEQLDFLRIR 893 Query: 618 GVTGGQGDFFASSQPLDTNVKKYSQ 642 G QG F++ L + ++ + Sbjct: 894 GCDEIQGYFYSRPL-LAEDFMRFVK 917 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 567 bits (1463), Expect = e-160, Method: Composition-based stats. Identities = 94/481 (19%), Positives = 186/481 (38%), Gaps = 21/481 (4%) Query: 177 NGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRL 236 +G ++ I P S +I + + R + I A D TGL NR Sbjct: 356 DGSVRWHITNAIPHREPDGSVVSHGFTMDITDRK----RAEQEIERLAFYDALTGLPNRR 411 Query: 237 FFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRY 296 ++L + + G ++ I L +F L+DT GH + + L + Sbjct: 412 MLLDRLQRAVAATSRTQQFGALLFIDLDNFKDLNDTLGHDMGDHLLSQVAARLLACVRET 471 Query: 297 PGALLARYHRSDFAALLPH------RTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIG 350 +AR+ +F +L +AE +A +L+ +++ IG Sbjct: 472 --DTVARFGGDEFVVMLETLRPELTEAASQAEIVAEKLLASLNQPFALGGQQHYSTPSIG 529 Query: 351 ICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSR 409 I + + +++++ A+ A A G N+ +D + + Q L+R Sbjct: 530 ITLFGDERLSVDELLKRADLAMYQAKGAGRNTQRFFDPDMQAAVNARSNLEADLRQGLAR 589 Query: 410 GGPRLYQKPAVTREGQVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRL 468 G +Y +P V ++ E + R +S A+++P+ Q GL + + Sbjct: 590 GELCVYYQPVVDHRARLLGVEALVRWRHPVRGMISPADFIPLAEQTGLILPLGQQVLQTA 649 Query: 469 IPLLRYWPEEN------LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADV 522 L+ W E +++ V+ +P F + TL C + +++ +EL E+ + Sbjct: 650 CGQLQRWGERKQTRHLSVSVNVSARQFRQPGFVAEVLQTLQGC-GADPRKLKLELTESLL 708 Query: 523 GQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTEN 582 + + + GV A++ G S S++K L ++ +K+ G VR++ + Sbjct: 709 LGDVEDTIARMEQLKREGVGFALDDFGTGYSSLSYLKRLPLDQVKIDQGFVRDVLTDPND 768 Query: 583 QLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 +V++++ +V A GV + + L G G QG F P++ S Sbjct: 769 AAIVRTILALAQSLDLEVVAEGVETTGQLAFLRLHGCEGFQGYLFGRPGPVEDIDAYLSH 828 Query: 643 R 643 Sbjct: 829 E 829 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 567 bits (1463), Expect = e-160, Method: Composition-based stats. Identities = 83/448 (18%), Positives = 185/448 (41%), Gaps = 20/448 (4%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 +I + R I A D T L NR F ++L T L+ E+ G ++M + Sbjct: 960 FFSDISERKASERR----IHRLAYYDALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFL 1015 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE- 320 L F ++D+ GH+ + + LS + + +AR +F LLP + +E Sbjct: 1016 DLDRFKPINDSLGHAAGDRMLQEVATRLSACVSQ--DDTVARMGGDEFTLLLPSQGDREI 1073 Query: 321 ----AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICA-WRSGQDTEQVMEHAESATRNAG 375 A +A ++ + + + IG+ + G + +M++A++A +A Sbjct: 1074 ALKRAIQVAELILGRLARPFTLEGREFFVTASIGVALSPQDGAELSLLMKNADTAMYHAK 1133 Query: 376 LQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQ-VHHRELMCR 434 G N++ Y + + + + + + L G L+ +P T +G+ + E + R Sbjct: 1134 EMGKNNFQFYQAEMNARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLR 1193 Query: 435 IFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVES 488 V +E++P++ + GL + ++ LR W + + ++ ++ Sbjct: 1194 WQHPRRGLVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQ 1253 Query: 489 LIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQA 548 + + L + + +EL E+ + ++ ++ + LG+ +AV+ Sbjct: 1254 FADGQLGERIAAILYET-GIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDF 1312 Query: 549 GLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSR 608 G S +++K+ +++LK+ V + ++ + ++++ + V A GV S+ Sbjct: 1313 GTGYSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQ 1372 Query: 609 SEWQTLIQRGVTGGQGDFFASSQPLDTN 636 ++ L + G QG F P + Sbjct: 1373 AQLDFLREHGCDEVQGYLFGRPMPAEQF 1400 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 567 bits (1463), Expect = e-160, Method: Composition-based stats. Identities = 86/451 (19%), Positives = 188/451 (41%), Gaps = 21/451 (4%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 R+I ++ + I + A D T L NR + L +L + H ++ Sbjct: 328 ATFRDITTSKAASEK----INNLAYFDPLTQLPNRRMLLDSLRHVLTISARSNQHCALLF 383 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE 320 + L +F L+DT GH + + L+ + G ++AR +F LL + +L+ Sbjct: 384 LDLDNFKTLNDTLGHDVGDLLLQQVATRLTDCVRE--GDIVARLGGDEFVVLLENLSLQA 441 Query: 321 AESIAGQ------LIKAVDTLPNNKMLDRDDMIHIGICAWRSGQD-TEQVMEHAESATRN 373 E+ +I + M IG+ + + E++++ A+ A Sbjct: 442 IEAANKAKKVAKKIIFELAQYYQLNMHRYHSTTSIGVTIFSGNETGIEELLKQADIAMYQ 501 Query: 374 AGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMC 433 + G N+W ++ ++ E + + + +L+ + V+ GQ E + Sbjct: 502 SKAAGRNTWHFFNKTMQESIIARADMERDLRKAIEDNQFQLHYQAQVSSSGQTLGAEALI 561 Query: 434 RIFDGNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP------EENLAIQVTV 486 R VS ++P+ + GL + + L+ W + LA+ ++ Sbjct: 562 RWQHPERGQVSPFNFIPLAEETGLILPIGQWVLDSACAQLKAWQKNPLTQDLVLAVNISA 621 Query: 487 ESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVN 546 + L + F ++ TL + + + R+ +EL E+ + ++IS + + +++ +G+ +++ Sbjct: 622 KQLHQEDFVEQVKATLKRHDINPA-RLKLELTESMLVENISDIITKMNILSKIGISFSLD 680 Query: 547 QAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVR 606 G S ++K+L + +K+ VR++ ++ +V++++ V A GV Sbjct: 681 DFGTGYSSLQYLKKLPLNQIKIDQSFVRDLITDASDRAIVRTIITMSHSLDISVIAEGVE 740 Query: 607 SRSEWQTLIQRGVTGGQGDFFASSQPLDTNV 637 + E Q L+ G T QG F+ P++ Sbjct: 741 TVEERQYLLDNGCTHYQGYLFSKPVPINEFE 771 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 567 bits (1463), Expect = e-160, Method: Composition-based stats. Identities = 87/498 (17%), Positives = 198/498 (39%), Gaps = 18/498 (3%) Query: 153 LAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQ 212 A +W + + +++ ETR R V + + + +R+I Sbjct: 269 WAEQWERMKSDPKQVFETRHQRKDGRIFPVEVSASQCLFNNEENHV--AFVRDIT----I 322 Query: 213 HSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDT 272 + + + + D TGL NR+ D+++ + E+ + V ++ L F +++D+ Sbjct: 323 RKKYEKELEHQSNHDALTGLANRVLLDDRIQQAIVHAERAQRNTAVFLLDLDRFKVINDS 382 Query: 273 WGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIKA 331 GHSQ + + LS + PG L+R +FA ++ H +A +A +++ A Sbjct: 383 LGHSQGDAVLLAVAERLSACIS--PGDTLSRLGGDEFAIVMTHVNHPADARIMAQKILNA 440 Query: 332 VDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLP 390 + + IG + G+ +E ++ HA++A A QGGN + + + Sbjct: 441 FEQPFPLGNRELRITTSIGASLYPRDGEQSEDLLRHADAAMYQAKKQGGNGFQFCSEEMD 500 Query: 391 EKGRGNVRWRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCRIFDGN-EEVSSAEYM 448 + + + Q L G L+ +P V G++ E + R + +S +++ Sbjct: 501 TRAHKALELEGDLRQALQLGSFVLHYQPKVKIASGKIDGCEALVRWNHPDKGMISPDDFI 560 Query: 449 PMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLM 503 P+ + GL + + W + L A+ ++ ++ F ++ L Sbjct: 561 PLAEETGLIIALGEWVLREACRQFKAWQAQGLPPIKIAVNLSARQFLQSDFVESIQTILH 620 Query: 504 QCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNV 563 + + + +EL E+ V + R+ ++ + +G ++++ G S ++++ + Sbjct: 621 EFD-IDPHWLDLELTESMVMEDPDRIAKLLAELKQIGFALSLDDFGTGYSSLNYLRRFPI 679 Query: 564 ELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQ 623 + LK+ + ++ + S++ A GV +R ++ L Q Sbjct: 680 DCLKIDRSFILDVASDATAASVANSVIGIAHSLGIHAIAEGVETREQYAFLAMCECDSIQ 739 Query: 624 GDFFASSQPLDTNVKKYS 641 G F+ P + + Sbjct: 740 GYLFSKPLPANDLAALLA 757 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 567 bits (1463), Expect = e-160, Method: Composition-based stats. Identities = 76/449 (16%), Positives = 175/449 (38%), Gaps = 16/449 (3%) Query: 197 SALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHG 256 A+ + R+I + + ++ I A D TGL NR ++L + E+ Sbjct: 504 EAIIGMGRDITDRKT----AESTIEQLAYHDPVTGLPNRTLLHDRLQLAINRAERDSQGV 559 Query: 257 IVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR 316 ++ + L F ++D+ GH+ ++ + N L + +AR +F L+ Sbjct: 560 AILFLDLDRFKAINDSLGHAMGDQLLRLVGNRLLDCVR--SSDTVARLGGDEFVVLISAL 617 Query: 317 TLKEAE-SIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNA 374 A S+ ++++ + + IGI + G+D E+++++A+ A A Sbjct: 618 DNDHAVGSVVMKILEQLCEPYQIDDHEVYTSSSIGISLFPRDGRDAEELLKNADMAMYQA 677 Query: 375 GLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMC 433 G N+ + L + + + + + L R L +P + R G + E + Sbjct: 678 KEAGRNTCHFFSPELNMRATERLLLESTMRRALEREEFFLVYQPQMELRSGHIAGIEALL 737 Query: 434 RIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVE 487 R + V ++P+ + GL ++ W +E +A+ V+ Sbjct: 738 RWRHPDLGVVPPNNFIPIAEETGLIVPLGEWVLAEACRQAVRWQQEGQPPLRMAVNVSAR 797 Query: 488 SLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQ 547 + + LM+ + +EL E+ V ++ +R + +G+ ++++ Sbjct: 798 QFRQRNLGLRIEKILMET-GLDPALLELELTESAVMENPEEAILTLRQLKKMGITLSIDD 856 Query: 548 AGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRS 607 G S S +K ++ LK+ V+++ + + + ++++ V A G+ Sbjct: 857 FGTGYSSLSHLKHFPIDRLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVVAEGIEH 916 Query: 608 RSEWQTLIQRGVTGGQGDFFASSQPLDTN 636 + + + QR QG + + + Sbjct: 917 SEQMEFMHQRHCDTMQGYYLSRPVTAEEF 945 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 98/463 (21%), Positives = 189/463 (40%), Gaps = 18/463 (3%) Query: 194 RTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVG 253 R ++ + + + E+ R D LI A D T L NR F ++ + + G Sbjct: 583 RADGSIYRHVGQFSDITEK-KRKDELIWEQANFDTLTNLPNRRLFADRFRQAISAGARSG 641 Query: 254 THGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL 313 +G ++ + L F L+DT+GHS ++ + L++ + +AR +F +L Sbjct: 642 RYGALLSLDLDQFKRLNDTFGHSMGDKLLIEVARRLTSCVREE--DTVARMGGDEFLVIL 699 Query: 314 PHRTLKE------AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEH 366 ++ AE IA ++ + + IGI +R D E+++ H Sbjct: 700 NGLGSEQNEAAIRAELIAEKIRNELCRPYQLDKTEHHSSSSIGIVLFRGHSDDPERLLAH 759 Query: 367 AESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQV 426 ++A + +G N+ +D S+ E + T + L R L+ + + G+ Sbjct: 760 VDTAMYQSKAKGRNAICFFDSSMQEILEKRGQLETALRGALERKEFLLHYQLQMDSSGRP 819 Query: 427 HHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN------ 479 E + R + VS +++P+ + GL + L W + Sbjct: 820 IGAEALLRWNNAKLGSVSPVQFIPVAEESGLILPIGHWVLETACAQLARWQSDPRFNRLC 879 Query: 480 LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNAL 539 +A+ V+ F +R+ L Q Q + +EL E+ V I+ + + L Sbjct: 880 IAVNVSAIQFREAAFVAKVRNVLQQ-SGIQPWLLKLELTESLVLDDINDSILKMEALKNL 938 Query: 540 GVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQ 599 GV+ +++ G S S++ L ++ LK+ VR+I + +VQ+++ + Sbjct: 939 GVKFSMDDFGTGYSSLSYLSRLPLDQLKIDQSFVRDITTDQHDAAIVQTIISMALSLGME 998 Query: 600 VYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 V A GV + + + L RG QG +A P++ K +Q Sbjct: 999 VIAEGVETEEQREFLDLRGCQAYQGYLYAKPMPIEELEIKLAQ 1041 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 567 bits (1461), Expect = e-160, Method: Composition-based stats. Identities = 88/491 (17%), Positives = 188/491 (38%), Gaps = 13/491 (2%) Query: 166 ELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAA 225 EL E A + GS + P ++ T I N + R + + + Sbjct: 472 ELREGHAELRNYRKDGSLFWNALSVSPVLNAAGEVTNYVGIVNDITERKRYEEQLEYQSN 531 Query: 226 QDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTL 285 D TGL NR +++ L E+ V I L F ++D+ GH ++ Sbjct: 532 HDGLTGLPNRNLLGDRIGQALTYAERYQRQTAVFFIDLDHFKFINDSLGHDMGDKLLQIA 591 Query: 286 TNLLSTFMMRYPGALLARYHRSDFAALLPHRTL-KEAESIAGQLIKAVDTLPNNKMLDRD 344 LS + +AR+ +F +L + ++A +A ++ AV + Sbjct: 592 ARRLSECVRSI--DTVARHGGDEFVIVLSDLAVSEDAAKVARKIQDAVCRPYQIGEHELV 649 Query: 345 DMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLI 403 GI + G D + ++++A+ A A G N++ Y L + + + Sbjct: 650 VSCSTGISLYPKDGSDAQVLLKNADVAMYRAKQCGRNNFQFYTGDLNDIVLARLTMEKYL 709 Query: 404 EQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYD 461 + L R ++ +P V G++ E + R +S A ++P+ + GL Sbjct: 710 RRALERDEFLVHYQPKVDLLSGRITGMEALVRWQSPELGFISPASFIPLAEETGLIVAIG 769 Query: 462 RLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIE 516 + + W ++ L A+ ++ + + + + + I +E Sbjct: 770 EWVLRTACAQNKAWQDDGLPPMVVAVNLSPRQFRQEDLADTV-HRIAEETGLAPRYIELE 828 Query: 517 LAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNI 576 + E+ + + ++ + LGV++ ++ G S S++K +++K+ VR+I Sbjct: 829 VVESLLMDDVDGAVAMLDALKELGVQLTMDDFGTGYSSLSYLKRFPFDMMKIDQSFVRDI 888 Query: 577 EKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTN 636 + + +V++++ + +V A G+ + + L QG +F+ P Sbjct: 889 TRDPGSAAIVRTVISLAHTLNLRVVAEGIETEGQLGYLRGLACDEMQGFYFSRPVPAAEF 948 Query: 637 VKKYS-QRYSV 646 + QR+ V Sbjct: 949 EQMLRDQRHLV 959 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 566 bits (1460), Expect = e-160, Method: Composition-based stats. Identities = 84/456 (18%), Positives = 186/456 (40%), Gaps = 21/456 (4%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 + +I + + + I++ A DV T L NR F ++L + + + G +M Sbjct: 423 AIFSDIT----ERKKTEERIKNLAYFDVLTALPNRRLFTDRLQIAIANAHRHGQQLAIMF 478 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LK 319 + L F ++D+ GH ++ +S + G +AR +F LLP L+ Sbjct: 479 LDLDLFKRINDSLGHGVGDQVLVETAARISHCVRE--GDTVARLGGDEFTVLLPELDHLE 536 Query: 320 EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQG 378 + +A ++I V + IGI + G E ++++A++A A G Sbjct: 537 DVAKLAERVIAHVKQPFLVDDNELYVTTSIGIAVYPEDGTTVEALIKNADTAMYRAKDLG 596 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFD 437 NS+ +Y ++ + + + + L+R RL + V +G++ E + R Sbjct: 597 RNSYQLYTAAMNARSFERLTMESSLRHALTREEFRLVYQVKVDSEDGRMSGVEALVRWHH 656 Query: 438 GN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIR 491 VS +++P+ G+ + + ++W + L A+ V+ + + Sbjct: 657 PEMGLVSPVDFIPLAEAMGVISDIGEWVLRTACRQCKHWMDLGLPPVRIAVNVSAQQFVE 716 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 + L + + + +EL E + Q + + V++ + A+GVR++++ G Sbjct: 717 TDVPEVVARALRET-GLPPQYLELELTETVLMQRVDEVVAVLKSLRAMGVRISIDDFGTG 775 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKR-----TENQLLVQSLVEACSGTSTQVYATGVR 606 S S++K + ++ LK+ V +I + +V +++ + A GV Sbjct: 776 YSSLSYLKRMPIDALKVDRSFVNDIFDGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGVE 835 Query: 607 SRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 + + + L +G QG + + + + + Sbjct: 836 TPEQAEFLRSKGCDEVQGYLISRPVSGEDLISLFDR 871 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 566 bits (1460), Expect = e-160, Method: Composition-based stats. Identities = 80/451 (17%), Positives = 170/451 (37%), Gaps = 15/451 (3%) Query: 203 LREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIR 262 ++ +E R ++ A D TGL NR + + ++ +M + Sbjct: 602 FTDLTERKETEER----VQWLAHFDPLTGLPNRTLLHIRSNLAISLAQRRHEPLALMFLD 657 Query: 263 LPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAE 322 L +F ++D+ GH +E + L + ++R +F +LP A Sbjct: 658 LDNFKNVNDSLGHGVGDELLKQFSQRLVNAVREQ--DTISRLGGDEFVLVLPGTDTDGAA 715 Query: 323 SIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNS 381 +A +L+ N + + + + IGI + G D + + A++A A G N Sbjct: 716 YLAERLLNIAARQYNIERHEINLTVSIGIAMYPTDGTDFDTLWRSADAAMYRAKQSGRND 775 Query: 382 WAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN- 439 + + + + ++ + + L R L +P ++ ++ E + R Sbjct: 776 YCFFTTEMQARSARTLQIDNALRRALERNQFSLVYQPQLSLNTNRIVGFEALIRWTHPQF 835 Query: 440 EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRF 494 E++P+ G + + LR W + L ++ ++ PR Sbjct: 836 GNTPPDEFIPIAESNGQIIPIGEWVLKTAVRQLRLWQDNGLKDVTISVNLSAVQFRHPRL 895 Query: 495 QRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVS 554 + L + S + + +EL E ++ VI + G+R++++ G S Sbjct: 896 PELVMAILEEAGVSP-ECLQLELTEGVAMENPLAAITVIDELRKKGIRISIDDFGTGYSS 954 Query: 555 TSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTL 614 +++K NV LK+ V+++ TE+ +V +++ A GV ++ + + L Sbjct: 955 LTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVSAVISLADSLGMITVAEGVETKEQLEFL 1014 Query: 615 IQRGVTGGQGDFFASSQPLDTNVKKYSQRYS 645 RG T QG + + D + Sbjct: 1015 RSRGCTEIQGYYLSRPLQADAVFSFIEDDHM 1045 >UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAC3_SULNB Length = 813 Score = 566 bits (1460), Expect = e-160, Method: Composition-based stats. Identities = 84/454 (18%), Positives = 188/454 (41%), Gaps = 15/454 (3%) Query: 198 ALDTLLREIQNAREQHSRLDTL---IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGT 254 + T++R+I + ++ L + A D TGL NR F ++L L+ E+ Sbjct: 358 VIYTVVRDISDKKKAQQELLKQKDILHHQAHHDALTGLPNRTLFSDRLEHGLKLAERHLG 417 Query: 255 HGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLP 314 + I L +F ++D+ GH ++ ++ L + + LAR +F ++ Sbjct: 418 KLALFFIDLDNFKQINDSLGHQIGDKVLVVVSKRLKAKIRQE--DTLARLGGDEFTIIME 475 Query: 315 H-RTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATR 372 + + +++ +A ++ K ++ + + IGI + Q+ ++++A++A Sbjct: 476 NFKDVQQVSVLAQKIQKVLNQPMHIEGHTLYISCSIGISFYPQDTQNANDLVKYADAAMY 535 Query: 373 NAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHREL 431 A +G N++ Y + V + Q + LY +P V ++ E Sbjct: 536 KAKEEGRNNFQFYSTEMTTLAYERVVMEASLRQAIKNEEFILYYQPQVNAQTSRMTGMEA 595 Query: 432 MCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVT 485 + R + + +++P+ + GL E DR + + +R W L ++ ++ Sbjct: 596 LIRWEHPHLGMILPDKFIPLAEESGLILEIDRWVMRTAMKQVREWYARGLDPGVLSLNLS 655 Query: 486 VESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAV 545 + L F +++ L + + + E+ E + + + + ++G+ +A+ Sbjct: 656 MRQLKDENFIDVIKEYLHMMS-FEPEWLEFEVTEGQMMKRPDDAVASLGEIKSMGISIAI 714 Query: 546 NQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGV 605 + G S ++K L V LK+ + I + EN +V++ + S + A GV Sbjct: 715 DDFGTGYSSLGYLKRLPVSRLKIDQSFIHGIPEDRENAAIVKATIALAKSLSLSIIAEGV 774 Query: 606 RSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKK 639 + + + L+ G QG ++ D KK Sbjct: 775 ENEEQKEFLLFNGCISMQGYYYGRPMTADQIEKK 808 >UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0D5_PELCD Length = 1141 Score = 566 bits (1460), Expect = e-160, Method: Composition-based stats. Identities = 88/454 (19%), Positives = 194/454 (42%), Gaps = 16/454 (3%) Query: 194 RTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVG 253 AL L +I +E + I A D TGL NRL F +++ + + Sbjct: 666 EGQPALIGSLLDITERKE----AEKTIEHLAFHDPLTGLANRLLFMDRIEQAIAHAHRHH 721 Query: 254 THGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL 313 +M + L F ++D+ GHS + + L+T + ++R+ +F LL Sbjct: 722 ESFALMFLDLDRFKTINDSLGHSAGDAALKEVAQRLTTCLRET--DTVSRFGGDEFNVLL 779 Query: 314 PHRT-LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESAT 371 + +E E IA +++K++ + + IGI ++ G++ ++++A++A Sbjct: 780 SGPSHEEEIELIAHKILKSLAWPYDINDHEVFMTCSIGIASYPKDGREAITLVKNADTAL 839 Query: 372 RNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRE 430 A G N++ Y S+ + + + + +M R R++ +P V + G++ E Sbjct: 840 YRAKDLGRNNFQFYSSSMNARALERMAMESSLRRMFERQELRVHYQPQVGLQSGRITGLE 899 Query: 431 LMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLA-----IQV 484 + R ++ + ++P+ + GL + L+ W + A I V Sbjct: 900 GLVRWEHPVGNMIAPSVFVPLAEETGLIVPMGEWVLQAGCYQLKTWLDAGFAPMRLGINV 959 Query: 485 TVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVA 544 + L + F + L +C+ + +E+ E + +++ +R + A+G+ ++ Sbjct: 960 SAHQLQKSDFAELVMQVLKECD-LPPHYLNLEITETVIMHNMNEAFETLRRLRAVGITIS 1018 Query: 545 VNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATG 604 ++ G S S++K+L + LK+ V+N+ + + ++E G + +V A G Sbjct: 1019 IDDFGTGFSSLSYLKDLPADHLKIDRAFVQNLPFGNNEANIARHIIEMAHGLNLKVIAEG 1078 Query: 605 VRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVK 638 V ++++ L + G QG + + + Sbjct: 1079 VENQAQLDFLREAGCDEIQGFLVSRPLAAEDITE 1112 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 82/445 (18%), Positives = 181/445 (40%), Gaps = 18/445 (4%) Query: 208 NAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFN 267 N + + + I + A D TGL NR ++L + + +HG ++ I L +F Sbjct: 381 NDITERKKAEERINALAFFDQLTGLPNRTLLLDRLKQTILSSGRSDSHGALLFIDLDNFK 440 Query: 268 MLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH------RTLKEA 321 L+DT GH ++ + L+ + G +AR +F +L + ++ Sbjct: 441 TLNDTLGHDVGDQLLKQVALRLTHCVR--DGDTVARLGGDEFVVVLANLNTNDKEAAQDT 498 Query: 322 ESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSG-QDTEQVMEHAESATRNAGLQGGN 380 E++A +++ ++ + IG ++ + +M+ A+ + A G N Sbjct: 499 ETVAEKILATLNQTYQLGHVTHHSSASIGATLFKGPLIPIDDLMKQADLSMYKAKAAGRN 558 Query: 381 SWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN- 439 + +D S+ + + + L+ L+ + + E ++ E++ R Sbjct: 559 AVRFFDPSMEIAVKVRAEMEDDLLRALAEKQFLLHYQAQMVGE-RLTGAEVLLRWQHPQR 617 Query: 440 EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP------EENLAIQVTVESLIRPR 493 VS AE++P+ + GL + L W LA+ V+ + Sbjct: 618 GMVSPAEFIPLAEETGLILPLGHWVLETACTQLAQWAGRPEVAHLTLAVNVSAHQFRQND 677 Query: 494 FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLV 553 F + L + + +R+ +EL E+ + +++ + + + GV +++ G Sbjct: 678 FVDQVLGVLEKT-GANPQRLKLELTESLLVENVEDIIDKMAALKHRGVGFSLDDFGTGYS 736 Query: 554 STSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQT 613 S S++K L ++ LK+ VR++ + + + +++V + V A GV + ++ Sbjct: 737 SLSYLKRLPLDHLKIDQSFVRDVLTDSNDASIARTIVALANSLGLGVIAEGVETEAQRDF 796 Query: 614 LIQRGVTGGQGDFFASSQPLDTNVK 638 L G QG +F+ P++ Sbjct: 797 LASSGCHTYQGYYFSRPLPIEDFES 821 >UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNS8_9GAMM Length = 944 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 108/481 (22%), Positives = 186/481 (38%), Gaps = 23/481 (4%) Query: 165 QELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYA 224 + E R R ++ + A + +I + +E + IR A Sbjct: 447 AQSEEIRLRTHDGSHRWVSIYASARFDEDGHIMATFGTMMDISDRKE----AEEEIRRLA 502 Query: 225 AQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFT 284 D TGL NR ++L L + + HG V+ I L +F ++DT GH+ ++ Sbjct: 503 FFDGLTGLPNRTLLHDRLGQALANTARTRHHGAVLFIDLDNFKDINDTLGHAVGDDLLCQ 562 Query: 285 LTNLLSTFMMRYPGALLARYHRSDFAALL------PHRTLKEAESIAGQLIKAVDTLPNN 338 + + + LAR +F +L P R EAE++ +LI + Sbjct: 563 VARRMENSVRE--ADTLARLGGDEFVIILNDLHPDPARAATEAEAVGRKLINLLREPFQL 620 Query: 339 KMLDRDDMIHIGICAWRSGQD--TEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGN 396 +R IG + SG+ E+V++ A+ A A G N+ YD L Sbjct: 621 AGQNRHVTPSIGATLF-SGRSLGVEEVLKQADLAMYRAKNAGRNTVRFYDPELHRAVEAR 679 Query: 397 VRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEE-VSSAEYMPMVLQFG 455 + L + +P V EG+V EL+ R +S AE++P+ Q G Sbjct: 680 FELENELRHALDEDRFSVVYQPQVDAEGRVIGAELLLRWEHAQRGAISPAEFIPVAEQTG 739 Query: 456 LSEEYDRLQISRLIPLLRYWP------EENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQ 509 L R + L W + L++ ++ P F LR+ L + + Sbjct: 740 LIVPIGRKVLRTACAQLGAWQHTAAFRDLTLSVNISARQFRDPHFVPHLREILQET-GAP 798 Query: 510 RKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLH 569 R+ +EL E+ + + I + I + ALGV A++ G S +++K+L + LK+ Sbjct: 799 GDRLKLELTESMLLEEIDTVVAHIDELRALGVEFALDDFGTGYSSLAYLKQLPLAQLKID 858 Query: 570 PGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFAS 629 VR++ + + Q +V V A GV + + L G QG + Sbjct: 859 QSFVRDVLDDPNDAAIAQMVVNLARTLDLDVIAEGVETVEQRAFLFGLGCRHFQGFLYGY 918 Query: 630 S 630 Sbjct: 919 P 919 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 565 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 83/476 (17%), Positives = 180/476 (37%), Gaps = 12/476 (2%) Query: 177 NGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRL 236 + G + R S T I + + + + A D TGL NR Sbjct: 467 QRKNGEIYPLWVTANAVRNSKEEITHFVAIFSDITLRKQTEQRLYYLAHHDALTGLPNRS 526 Query: 237 FFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRY 296 F ++L + ++ V+ I L F ++DT GH + + + + Sbjct: 527 LFLDRLEHAIHHAQRHHHRIAVLFIDLDRFKFINDTLGHPIGDILLKQVAERMRLNIRAE 586 Query: 297 PGALLARYHRSDFAALLPHRTLKEAES-IAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR 355 +AR +F ++ + T A S I ++I A + N K + IG+ + Sbjct: 587 --DTIARLGGDEFTVIIENFTDTSAISLITQKIISACEKPFNIKGNELFVSASIGVSLYP 644 Query: 356 -SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRL 414 G + +++ A++A A +G + + + + + L+ + L+R +L Sbjct: 645 EDGHEASMLLQRADAAMYQAKKRGKSCCQFFTTEINTAATEQLALKNLLRRALARKEFQL 704 Query: 415 YQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLL 472 Y +P + G + E + R D +S ++P+ + GL + Sbjct: 705 YYQPIINMESGAIVSVEALIRWVDPELGLISPNTFIPLAEENGLILPLGEWVLQTACTQA 764 Query: 473 RYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHIS 527 + W + N +AI ++ L + F + + L + + +EL E+ + + Sbjct: 765 KIWNQSNPYPVRIAINLSARQLEQTDFSERVSEILKKTP-FPTDHLELELTESMLINRME 823 Query: 528 RLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQ 587 + + +G R++++ G +++K ++ +K+ V+ I ++ + Sbjct: 824 SSLKTLNTLKKMGCRLSLDDFGTGYSPLAYLKRFPIDTVKIDRSFVQGISIDPDDAAITT 883 Query: 588 SLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 ++ V A GV +R + L + V QG F + P + +K ++ Sbjct: 884 AVTTMAHSLKRAVIAKGVETREQLNFLNEIKVDEAQGYFISYPVPAEELTQKLREK 939 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 565 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 99/658 (15%), Positives = 243/658 (36%), Gaps = 44/658 (6%) Query: 4 TTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVS-NDFSVL- 61 T + + G ++ + + + R+ + + I H+ + D S L Sbjct: 273 TNRIYFITVMAVGTSVTLLFV-----------WFLMQRLTSPLSLITRHVEAIPDKSGLH 321 Query: 62 -------RPQITELMMSADIVRVDL-LHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIK 113 + ++ L+ + + + + L H + + + + + L + Sbjct: 322 NLINLERKDELGTLINAFNSMILSLDQHQNALRESESNFRALADNANDGLQI---ITDSS 378 Query: 114 HPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRAT 173 H + + + L+TT + +++ + + ++ A Sbjct: 379 HLAYVNKRAAEIVGYSVEEMLLTTIETIIHPDHLQMIIERKAKTDAGEFVPKQFEIMLAH 438 Query: 174 RILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLN 233 R NG + T L ++R+I + + + + I+ A D TGL Sbjct: 439 R--NGSCVPVEVTTARTIWQGKQVEL-AIVRDITDRK----KAEDEIQQLAYYDTLTGLP 491 Query: 234 NRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFM 293 NR ++L + + +M + L F ++DT GH + T+ L+ + Sbjct: 492 NRSLLQDRLGQGIVQAVRDNRKVAIMFLDLDRFKSINDTLGHVAGDSLLATVAERLTECV 551 Query: 294 MRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGIC 352 +AR +F ++ ++ IA +++ A+ + IGI Sbjct: 552 RET--DTVARIGGDEFVIIISAIEHAEDLNKIAEKILAAISKPLVLNDQEIFITASIGIA 609 Query: 353 AWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGG 411 + G D + ++++A+ A A QG N++ + + + ++ + + L R Sbjct: 610 IYPEDGTDVQGLLKNADLAMYKAKDQGKNAFQYFSREMNVQALEHLILENSLRRALERNE 669 Query: 412 PRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLI 469 ++ +P + + G++ E + R + + + ++PM + GL + Sbjct: 670 FVIFYQPQMDLKSGRLVGMEALIRWQHPDLGLLPPSRFIPMAEETGLILPIGEWALQTAC 729 Query: 470 PLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQ 524 R W + +A+ + + +F + L + ++ +EL E+ + Sbjct: 730 AKNRAWMDAGFMPLRVAVNLCGIQFRQKKFIELIEAVLKKT-GLAPSQLELELTESMLMS 788 Query: 525 HISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQL 584 V+ + +GV +A++ G S S++K + +K+ +R++ ++ Sbjct: 789 KAEESTTVLHKLKEMGVSLAIDDFGTGYSSLSYLKNFPINRVKIDRSFIRDVPNNPDDTA 848 Query: 585 LVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 +V +++ + +V A GV + S+ + L R QG +S P + ++ + Sbjct: 849 IVSAIIAMAHNLNLKVTAEGVENHSQLEFLSTRNCNEIQGYLLSSPLP-EAEFTRFLR 905 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 88/441 (19%), Positives = 173/441 (39%), Gaps = 11/441 (2%) Query: 206 IQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPD 265 I + + I+ A D TGL NR ++ L ++ G +M + L Sbjct: 593 ITRDITEKKLAEAQIQQLAHFDQLTGLPNRSQLHDRFRYALSLAQRHGDQLAIMFLDLDH 652 Query: 266 FNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIA 325 F ++DT GHS ++ ++ L + L+R +F LLP +A +A Sbjct: 653 FKNINDTLGHSVGDQLLVDVSRRLKAALREEDS--LSRLGGDEFILLLPGTDEAQASQVA 710 Query: 326 GQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAI 384 +L+ AV + + + IGI + GQD E + ++A++A N + Sbjct: 711 TKLLAAVAQPCQIEQNELVSTVSIGIALYPNDGQDFETLSKNADAAMYRVKQASRNDFRF 770 Query: 385 YDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEV 442 + + ++ + L R L+ +P V ++G + E + R + Sbjct: 771 FTQEMQTHSARTLQLVNALRHALPRHEFELHFQPQVALQDGHIVGAEALLRWRHPELGMI 830 Query: 443 SSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRW 497 S AE++P+ G + + L+ W + L A+ ++ P Sbjct: 831 SPAEFIPIAEDSGQILAIGEWVLRTAVRQLKQWLDAGLRPMVIAVNLSAVQFRHPNLMAL 890 Query: 498 LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 + L + + + +EL EA ++ ++ G+R++++ G S S+ Sbjct: 891 VTRILDEAA-LPPEFLELELTEAAAMDDPPAAIAIMNKLDEHGIRMSIDDFGTGYSSLSY 949 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 +K+ V LK+ VR+I +++ +V +++ S A GV + S+ L + Sbjct: 950 LKKFKVNKLKIDQSFVRDISDDPDDKAIVTAIINLASSLGMHTIAEGVETASQLAFLRLQ 1009 Query: 618 GVTGGQGDFFASSQPLDTNVK 638 G QG + + P D Sbjct: 1010 GCDEVQGYYVSKPLPKDQFEA 1030 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 83/476 (17%), Positives = 188/476 (39%), Gaps = 12/476 (2%) Query: 176 LNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNR 235 +N +R + P T L I + + I A D T L NR Sbjct: 235 INTQRNDVIWTESKINPIMDEEGNVTKLLLITRDVTDRKQSEETIHHLAYHDALTDLPNR 294 Query: 236 LFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMR 295 + QL+ + ++ + V+ + L F ++D++GH + + L + Sbjct: 295 RMYVQQLSKEMMQAKRFQSSLAVLFLDLDRFKDVNDSFGHDVGDMLLIEASKRLQACLK- 353 Query: 296 YPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAW 354 PG ++AR +F + EA +A Q++ + + IGI + Sbjct: 354 -PGDVVARLGGDEFTIMQNQLLDRNEATELAEQIMYQLQRPFELDGHVFNVSCSIGIALY 412 Query: 355 R-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPR 413 G + E +++ A++A +G N + +D S+ K + + + + + + Sbjct: 413 PQDGDNPEDLLKRADTALYTVKSRGKNGYDFFDPSMEAKSLERILMENEMRKAIEQEQFQ 472 Query: 414 LYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPL 471 +Y +P + + E + R + ++P+ + G+ + + Sbjct: 473 IYYQPKIDIATSAMTGMEALVRWVHPELGIIPPNRFIPIAEETGMILALGEWILKQACKQ 532 Query: 472 LRYWPEEN----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHIS 527 + W ++ +++ ++ + + ++D L + K + +E+ E+ + + Sbjct: 533 NKNWHDQGYTLKVSVNLSARQIYQKDLVEMIKDILQET-KLSPHWLELEITESIFVK-ME 590 Query: 528 RLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQ 587 V++ + +G++++++ G S S+IK L V+ +K+ +R+I E+Q +V+ Sbjct: 591 EATAVLQQIRDIGIQISIDDFGTGYSSFSYIKSLPVDTIKIDASFIRDIHHNQESQAIVK 650 Query: 588 SLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 ++V + V A G+ + L + G GQG F+ P D + Q Sbjct: 651 AIVTIAQSLNMNVIAEGIELHDQVAALKENGCDHGQGYLFSKPLPTDDFDQLLRQE 706 >UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GA6_THICR Length = 815 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 92/477 (19%), Positives = 189/477 (39%), Gaps = 24/477 (5%) Query: 178 GERGSNVLGTIYEWPPRTSSALDTLLREIQNARE--QHSRLDTLIRSYAAQDVKTGLNNR 235 E G + EW + LR + E + + + I++ A D T L NR Sbjct: 343 KEVWVQDRGDVVEWDAEENP-----LRMVGGFYEVTERKKAEEAIQNLAFYDPLTQLPNR 397 Query: 236 LFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMR 295 ++L + E+ +M I L DF L+DT GH ++ + L + Sbjct: 398 RLLQDRLQQEMAVTERSKHVCALMFIDLDDFKTLNDTLGHDTGDKLLRQVATRLRENVRE 457 Query: 296 YPGALLARYHRSDFAALLPHRTLK------EAESIAGQLIKAVDTLPNNKMLDRDDMIHI 349 + +AR +F +LP AE +A ++++ ++ I Sbjct: 458 F--DTVARIGGDEFVLILPSLDDDWKDAATHAELVAQKVLRVLNKPYLLDSTPYHSTPSI 515 Query: 350 GICAWRSGQDT-EQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLS 408 G+ + Q+T E++++HA+ A A +G N+ YD ++ E + Q ++ Sbjct: 516 GVKLFSGHQETLEELLKHADLAMYQAKAKGRNTVRFYDTTMQEVVNAKSVMEASMRQAIT 575 Query: 409 RGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISR 467 L+ +P + GQ+ E + R ++ +++P+ + G R + Sbjct: 576 GQQFVLFYQPQINSNGQIIGAEALVRWRHPQKGLIAPNKFIPLAEENGFILSIGRWVLQT 635 Query: 468 LIPLLRYWPEE------NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEAD 521 L W + +A+ V+ + + + Q + + + +EL E+ Sbjct: 636 ACEQLVEWARQPATAQITMAVNVSARQFHQIDLVEEVERIICQT-GANPQLLKLELTESL 694 Query: 522 VGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTE 581 + + I + ++ + LGV +++ G S +++K L ++ LK+ VR+I + Sbjct: 695 LVKDIEDVVDKMQALKKLGVSFSLDDFGTGYSSLAYLKRLPLDQLKIDQTFVRDIIDDSN 754 Query: 582 NQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVK 638 + + ++++ V A GV + + Q LI G QG F P++ + Sbjct: 755 DAAIARAVIALAKSMEFNVIAEGVENIEQHQMLIDMGCRVFQGYLFGRPVPIEEFFQ 811 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 81/450 (18%), Positives = 166/450 (36%), Gaps = 16/450 (3%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 TL +I ++Q + + A D TGL NR ++L L + G ++ Sbjct: 582 TLFSDITERKQQ----EVAMWRQANFDPLTGLANRSLLQDRLDRALAHARRHGCKVGLLF 637 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLK 319 + L F ++D+ GH +E + L++ + +AR +F ++ Sbjct: 638 LDLDGFKWINDSLGHDVGDELLVDVARRLNSCVR--DEDTVARLGGDEFTVVVHDLADRA 695 Query: 320 EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQG 378 + +IA +L+ + + +GI + G D + ++ +A+ A A G Sbjct: 696 DLGAIADKLVAVLREPFALRGARHHISGSVGITVFPDDGDDVQTLLRNADIAMYKAKQAG 755 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFD 437 N Y + V + + + L+ +P V G + E + R Sbjct: 756 KNRAQPYAPHMQADALARVHLEADLRMAVEQRAFELHYQPIVDCASGALVGAEALIRWKH 815 Query: 438 GN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW-----PEENLAIQVTVESLIR 491 +S E++P+ + GL + ++ R W P L + V+ Sbjct: 816 PERGMISPLEFIPVAEECGLIVPIGEWVLREVVRQRRDWLARGHPPLRLTLNVSGVQFRE 875 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 +R L + + R ++ E+ E+ + ++ + + G+ A++ G Sbjct: 876 AGLPELVRTLLAEFGTA-RSSLVFEITESVLMGGSENVEARMCDIKEQGICFALDDFGTG 934 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S S++K V+++K+ VR+ + LV++++ +V A GV S + Sbjct: 935 FSSLSYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEAIINMAHSLGLRVTAEGVESAEQR 994 Query: 612 QTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 + L G QG D + Sbjct: 995 EFLRALGCDYLQGYLIGKPLAADAFEALMA 1024 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 564 bits (1455), Expect = e-159, Method: Composition-based stats. Identities = 82/443 (18%), Positives = 174/443 (39%), Gaps = 16/443 (3%) Query: 205 EIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLP 264 +I + R IR A D T L NR +LA L ++ +M+I L Sbjct: 458 DISELKATQER----IRHLAHHDTLTNLANRFSLHEKLAQALAFCKRNRMQLALMLIDLD 513 Query: 265 DFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAES 323 F ++DT GH +E + LS + ++AR +F LP + +A Sbjct: 514 RFKTINDTLGHQAGDELLVQVAKRLSHAVRE--SDIVARLGGDEFVIALPGIGSPADAAH 571 Query: 324 IAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSW 382 +A + + + K + IGIC + G + ++++A+ A +A G ++ Sbjct: 572 LADDITREISAPYLIKGQELRTSPSIGICVYPGDGSEIGDLLKNADVAMYHAKANGRGNY 631 Query: 383 AIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG-NE 440 + + + + + + ++R L+ +P + R G + E + R Sbjct: 632 QFFTEDMNIATTERMCLESDLRLAITRREFLLHYQPQLDLRSGTIVGVEALIRWQHPTRG 691 Query: 441 EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQ 495 VS A+++P+ + G+ + L+ W + +I ++ + Sbjct: 692 LVSPADFIPIAEESGMIAAIGDWVLEEACRQLKVWQNRGITHLRMSINLSAGQFLDKTLP 751 Query: 496 RWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVST 555 + + L+ R+ +E+ E+ V++ +++ G+ ++++ G S Sbjct: 752 ARIHE-LLAANDLSADRLDLEVTESMSMASPDESISVMKTLSSSGLTLSIDDFGTGYSSL 810 Query: 556 SWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLI 615 +++K L + LK+ V++IE + + V +V A GV + ++ + L+ Sbjct: 811 AYLKLLPIHTLKIDRSFVKDIESDPNDADICDVTVLLAHKLGLEVVAEGVETEAQLKFLL 870 Query: 616 QRGVTGGQGDFFASSQPLDTNVK 638 G QG + P D + Sbjct: 871 SIGCEKVQGYLISKPLPADQAER 893 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 564 bits (1455), Expect = e-159, Method: Composition-based stats. Identities = 78/440 (17%), Positives = 181/440 (41%), Gaps = 12/440 (2%) Query: 204 REIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRL 263 E+++ + R+++ +R A D TGL NR +L +++ + T ++ I L Sbjct: 647 SELESEVLERRRIESKLRYLAHHDALTGLANRTLLQQRLGEAMDNAAQDDTKVAILFIDL 706 Query: 264 PDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE-AE 322 F ++D+ GH + + + L+ + +AR +F +LP + + A Sbjct: 707 DRFKTINDSLGHHIGDTLLKNVASRLTETLR--SNDTIARLGGDEFMIILPLKANEALAG 764 Query: 323 SIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNS 381 +A +++ A+ + IGIC + G +M +A++A A G N+ Sbjct: 765 KLASKILDALRPPIRIDGHELFVTPSIGICFYPNDGVTVNALMRNADTAMYQAKANGRNT 824 Query: 382 WAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN- 439 + + + + + + + + R ++ +P + + ++ E + R Sbjct: 825 YCYFTAEMNAAADNYFQIESDLRRAVDRNEFEVFYQPVIDLKTHRITSYEALVRWRHPTK 884 Query: 440 EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRF 494 V A+++ + + GL E + + + LR W +E LA+ ++ P Sbjct: 885 GLVGPAQFITVAEESGLIGEIGTIVLRQACSQLRSWIDEGFTSPILALNLSPIQFNDPNL 944 Query: 495 QRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVS 554 + L + RI +E+ E + Q ++ +++ G R++++ G S Sbjct: 945 TEGICRILRDYD-LTPDRIELEITETVIMQDGELALGTLQNLSSRGFRLSIDDFGTGYSS 1003 Query: 555 TSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTL 614 +++K V+ LK+ + ++ ++ +V +++ + V A GV ++ ++ L Sbjct: 1004 LAYLKRFPVDTLKIDRSFITDMTANENDRAIVTAIMALANSLHLSVIAEGVETKEQYDLL 1063 Query: 615 IQRGVTGGQGDFFASSQPLD 634 QG + A P + Sbjct: 1064 SALNCNFAQGYYMAKPMPAE 1083 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 84/449 (18%), Positives = 184/449 (40%), Gaps = 16/449 (3%) Query: 198 ALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGI 257 + + ++ AR +++ A D TGL NRL +++L L + Sbjct: 300 GVVLVFHDVSEARNMANKM----TYLAEHDYLTGLPNRLLLNDRLNQALTIARRDQEFIA 355 Query: 258 VMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT 317 +M + L F ++D+ GH ++ + L + + ++R +F LLP T Sbjct: 356 LMFLDLDHFKNINDSLGHEVGDQLLKMVARRLESCLR--ASDTISRQGGDEFMILLPELT 413 Query: 318 L-KEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAG 375 +A +L+ A + IGI + G++ E + ++A++A +A Sbjct: 414 NYFSPAEVAEKLLAAATVPYEIGSHEITVSASIGIAVFPDDGENGELLTKNADAAMYHAK 473 Query: 376 LQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCR 434 G N++ + ++ E+ + + + + R LY +P + R GQV E + R Sbjct: 474 SLGRNNYQFFTRAMNERVMEIAELESKLRRAVERNEFVLYYQPKIDIRTGQVVGAEALIR 533 Query: 435 IFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLA-----IQVTVES 488 + V+ ++P+ GL + + W LA + ++ Sbjct: 534 WQHPSWGLVAPDRFIPIAEDSGLIRPIGLWVMREACRQNQEWQAAGLARIPVAVNLSTVQ 593 Query: 489 LIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQA 548 L + F + + + L+ + + +E+ E+ + + + + ++GV++A++ Sbjct: 594 LRQHNFLQEVSEILL-MSGLEPDYLELEVTESVAIHAETEVINWLHKLRSMGVKLALDDF 652 Query: 549 GLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSR 608 G S S++K L + +K+ +R+IE ++ ++ +++ G V A GV + Sbjct: 653 GTGYSSLSYLKRLPINNVKIDKSFIRDIETDPDDATIITAIIRMSHGLRLNVIAEGVENI 712 Query: 609 SEWQTLIQRGVTGGQGDFFASSQPLDTNV 637 ++ + L + G QG + P D Sbjct: 713 NQLEFLKKEGCDQMQGFIASRPVPADEFA 741 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 90/455 (19%), Positives = 181/455 (39%), Gaps = 16/455 (3%) Query: 197 SALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHG 256 S + +I + +E +R IR A D TGL NRL ++L + + T Sbjct: 419 SHYIGIFSDITDRKESEAR----IRHLAHHDALTGLPNRLLLQDRLGQAILKARRNSTQA 474 Query: 257 IVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR 316 V+ + L F ++DT GH + +T + +AR +F +LP Sbjct: 475 AVLFLDLDRFKTINDTLGHEIGDGLLRQVTQRCLGAVRET--DTVARQGGDEFVIVLPDL 532 Query: 317 TL-KEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNA 374 ++A +IA +++ A+ + IGI + G D ++ +A++A A Sbjct: 533 EHGQDAGTIARKILAALTEPCRLGPHELTVTGSIGIALYPGDGADPSMLLRNADAAMYRA 592 Query: 375 GLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMC 433 G N + Y + G + + L R RLY +P V +G + E + Sbjct: 593 KADGRNGFQFYAADMNTHSLGELLLEHQLRGALDRNELRLYFQPKVNAADGCIEGCEALL 652 Query: 434 RIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLA-----IQVTVE 487 R + ++ ++P + GL + LR W + LA + ++ + Sbjct: 653 RWQHPDLGLLAPGRFVPAAEESGLIVPIGEWVLREACRQLRAWIDAGLAPVPVAVNLSGQ 712 Query: 488 SLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQ 547 +R+ L + + + +EL E + + + R + + A+GV +A++ Sbjct: 713 QFAHQDIVALVREALAE-HRLPAPMLELELTETMLMRDLERTIATLAELRAMGVTLAIDD 771 Query: 548 AGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRS 607 G S +++++ +V LK+ V +I + + + +++ V A GV + Sbjct: 772 FGTGYSSLAYLRQFDVNALKIDRSFVHDIRPGSSDGKIATAVIALAHNLGLTVTAEGVET 831 Query: 608 RSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 ++ L + G QG F +P + ++ + Sbjct: 832 AAQQHFLARHGCDQLQGFLFGQPEPAEAFAQRLAD 866 >UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZY7_SULD5 Length = 586 Score = 563 bits (1453), Expect = e-159, Method: Composition-based stats. Identities = 102/503 (20%), Positives = 191/503 (37%), Gaps = 18/503 (3%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 +L ++R + +E + E V+ + S D + Sbjct: 86 WLPHELIERMQRLAQGVEDSIMVEMGIENSGGVV-PLEFVLQYLSFGEDDYFVILGKDIS 144 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + ++ I + A D T L NR +++A L ++ G ++MI L +F L+D Sbjct: 145 ERRHAESTIHTLAFFDPLTHLANRQLLHDRMAQALAKSQRHHKVGALLMIDLDNFKALND 204 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE------AESIA 325 T GH +E + + T + G LAR +F LL +E AE A Sbjct: 205 TKGHHIGDELLIQVAQRIQTIVRE--GDTLARISGDEFVVLLEGLAHEESKAAQEAEKFA 262 Query: 326 GQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAI 384 ++ ++ + IGI + + E +++ A+ A A +G N Sbjct: 263 TRVKYLLNEPYELLGYEHTCSSSIGIALFNGQPKSKETLLKQADIAMYQAKEKGRNRICF 322 Query: 385 YDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVS 443 YD + E + LS+ L+ +P V EG++ E + R + Sbjct: 323 YDPLMQENIEHKTTMEHELRMALSKEELILFYQPQVNLEGKIVGVEALLRWNHPQKGLIP 382 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW------PEENLAIQVTVESLIRPRFQRW 497 ++P+ + GL + R L W +L+I V+ + F Sbjct: 383 PNTFIPLAEETGLIIPVGSWVLHRACQQLSEWKKDFPHQPLHLSINVSAKQFQEASFYET 442 Query: 498 LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 + + + S I +EL E+ + I I + LGV +++ G S S+ Sbjct: 443 VANAIA-LSGSDAGSIKLELTESLILDSIHETIAKIEALRLLGVGFSLDDFGTGYSSLSY 501 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 +K L ++ LK+ VR+I + ++V++++E V A GV + ++ L++ Sbjct: 502 LKRLPLDELKIDQSFVRDIGHDNNDAMIVKTIIEMAHNFDLDVIAEGVEDKEQFNFLMEN 561 Query: 618 GVTGGQGDFFASSQPLDTNVKKY 640 G QG F P + + + Sbjct: 562 GCGLFQGYLFGKPMPPEELERLF 584 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 563 bits (1453), Expect = e-159, Method: Composition-based stats. Identities = 101/483 (20%), Positives = 192/483 (39%), Gaps = 16/483 (3%) Query: 168 LETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQD 227 ++ R T ER + G + L ++I + +RL R A D Sbjct: 387 IDHRITCPDGSERILHEDGELVYDDEGKPLLLRGTAQDITERHDYQNRL----RHLANFD 442 Query: 228 VKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTN 287 TGL NR F ++L L + + ++ + + F ++D+ GH +E Sbjct: 443 PVTGLPNRTLFKDRLQHALANATRNQRLVALLFLDMDQFKNVNDSLGHMMGDELLRQTAE 502 Query: 288 LLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESI-AGQLIKAVDTLPNNKMLDRDDM 346 L + G +AR+ +F LL + E S+ A ++++A+ + Sbjct: 503 RLLGCVRE--GDTVARFGGDEFIILLENIEHSEQASLSAERVVQAMRRPFRLGEHEHFCN 560 Query: 347 IHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQ 405 + IGI + + E ++ HA+SA A QGG + Y + + + + + Q Sbjct: 561 VSIGISLYPEDDEHPEDLVRHADSAMYLAKAQGGAGYRFYTPDMNTRAMERLLLQNQLHQ 620 Query: 406 MLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRL 463 L G +++ +P + R G++ E + R V AE++PM GL E Sbjct: 621 ALELGQFQVHYQPQMDLRSGRICGVEALVRWQHPERGLVPPAEFIPMAEDTGLIEPLGEW 680 Query: 464 QISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELA 518 + +R W + L ++ ++ P + L + + +R+ +E+ Sbjct: 681 VLRTAAREVRGWQDRGLPALNLSVNLSPRQFRHPDLPGMVERVLAE-SGLEAERLELEIT 739 Query: 519 EADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEK 578 E + + + + LGVRV+++ G S +++K L V LK+ V I + Sbjct: 740 ERLIIVDLEHTVDTLSRIARLGVRVSIDDFGTGHSSLAYLKRLPVHALKIDREFVDGIGQ 799 Query: 579 RTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVK 638 +++ + ++++ QV A GV +R + L + G QG F A P Sbjct: 800 DSDDAAIAEAVIALGRTLRLQVIAEGVETREQASFLREHGCDAVQGFFIARPMPAGELTG 859 Query: 639 KYS 641 S Sbjct: 860 WLS 862 >UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacteria RepID=A2SDI4_METPP Length = 1006 Score = 563 bits (1452), Expect = e-159, Method: Composition-based stats. Identities = 94/499 (18%), Positives = 191/499 (38%), Gaps = 14/499 (2%) Query: 158 LQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLD 217 +++ L +E+ R + L G + I P + + L Sbjct: 507 VEQCLQDREVYGVRESAALRHRSGRDYGVQISAAPIAGRDGRVLGAVMVFQDVTEARGLA 566 Query: 218 TLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQ 277 + A D TGL NR+ F +++ + + G V+ + L F ++D+ GH+ Sbjct: 567 QKMSYLAHHDGLTGLPNRVLFQDRVHQACQSGRRHGRRFAVIFMDLDHFKHVNDSLGHAV 626 Query: 278 VEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA---ESIAGQLIKAVDT 334 +E + L+ + + R +F LL E +A ++++ V Sbjct: 627 GDELLKAVAQRLTGALR--ASDTICRLGGDEFVVLLSDLDDVEVDGVAEVAKKILRQVAQ 684 Query: 335 LPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKG 393 + + +GI + G+D + +M+ A++A + +G N + + ++ + Sbjct: 685 PCVLGGTEVNVGASLGIALFPGDGEDPDTLMKRADAAMYRSKREGRNRYHFFSKAVDDAA 744 Query: 394 RGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNEEV-SSAEYMPMV 451 ++ + + L+ G ++ +P V R E + R + + S A ++P+ Sbjct: 745 SARLQLEADMRRALAAGQFIVHYQPVVHGRTRDAVAVEALLRWDRAGQGLQSPAVFIPVA 804 Query: 452 LQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCE 506 + GL + + LR W L A+ V+ L + F + D L Sbjct: 805 EESGLIVPMGHWVLRQACEQLRAWSGTALGGISVAVNVSPVQLAQADFVDTVADVL-HAT 863 Query: 507 KSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELL 566 R+ E+ E+ + Q ++R + LGVR+A++ G S +K V+ L Sbjct: 864 GVDGSRLEFEITESTLMQDPEATLEMLRRLKGLGVRIAIDDFGTGYSSLGHLKRFPVDTL 923 Query: 567 KLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDF 626 K+ VR++E +++ LV++++ V A GV + ++ L QG Sbjct: 924 KIDHTFVRDLEADADDRELVRAILAMARSLRLHVVAEGVETEAQAAILAAMECPAFQGYL 983 Query: 627 FASSQPLDTNVKKYSQRYS 645 FA R + Sbjct: 984 FARPAGAAVTAAWLQDRAA 1002 >UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6N3_NITMU Length = 1025 Score = 563 bits (1451), Expect = e-159, Method: Composition-based stats. Identities = 98/533 (18%), Positives = 218/533 (40%), Gaps = 17/533 (3%) Query: 116 GMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAV-RWLQRQLAGQELLETRATR 174 G+ + + ++ + + + +IV F R+ + + + A Sbjct: 474 GVGWQKDWIGRQISFTYENSQNRFVLASHQSVIVEDFQTETRFKPSSILKSHNIRSCADV 533 Query: 175 ILNGERGS-NVLGTIYEWPPRTSSALDTLLREIQNAREQ---HSRLDTLIRSYAAQDVKT 230 +++G G +LG P R +S+ L+ + N + + A D T Sbjct: 534 LISGAGGPYGILGAYSPEPQRFTSSSINFLQSLANILATAIDRKTTEERLTYLAQFDPLT 593 Query: 231 GLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLS 290 L NR F ++L +E + V+ L F +++DT GHS +E + L Sbjct: 594 ELPNRSLFLDRLRQAMEHAHRNRRRVGVVFADLDRFKIVNDTMGHSTGDELLIHVAKRLQ 653 Query: 291 TFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHI 349 + +AR +FA +L ++A IA ++I A+ + + + Sbjct: 654 QCVR--SCDTVARLGGDEFALILSDLVQPEDATLIAEKVISALQVPFELETQEIYVSASL 711 Query: 350 GICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLS 408 GI + G D + ++ +A++A A QG + Y + E+ ++ T + L+ Sbjct: 712 GISIYPGDGTDADSLLRNADTAMFQAKEQGPAIYQFYLPQMNERAVARLKIETQLRGALA 771 Query: 409 RGGPRLYQKPAVTR-EGQVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQIS 466 R L+ +P + G++ E + R + V +++ ++ GL + Sbjct: 772 RREFVLHYQPKASLINGEITGFEALLRWQHPAHGLVPPLQFISVLEDTGLIVAVGEWVVK 831 Query: 467 RLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEAD 521 + +R W + L AI ++ + + +TL + + + EL E+ Sbjct: 832 TVCEQIREWQGQGLVLHPIAINLSARQFQQQDLDSIIGETL-RATNIDPRLLEFELTESV 890 Query: 522 VGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTE 581 + + ++ + A GV+++++ G S +++K +++LK+ +R++ + Sbjct: 891 LMKEAEMAANALQNLKAFGVQISMDDFGTGYSSLAYLKRFPLDVLKIDRAFIRDVTTDPD 950 Query: 582 NQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLD 634 + + ++++ +V A GV +R++ + LI+ G QG +F+ PL+ Sbjct: 951 DATITVAMIKLAHSLGLKVVAEGVETRAQLEFLIRHGCDEMQGYYFSQPLPLE 1003 >UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG8_METSD Length = 950 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 93/516 (18%), Positives = 194/516 (37%), Gaps = 24/516 (4%) Query: 149 VMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTL---LRE 205 + F W R + E + + E W A+ L + Sbjct: 436 ALAFYPEEWRSRIVQALE-ECLQKGDSFDEELPILTCKDKLLWIRIIGQAVYDLHGNITR 494 Query: 206 IQNARE---QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIR 262 I+ A + ++ I+ A D T L NR F ++L L + G V+ I Sbjct: 495 IEGAIQDISAQKVAESRIQHLAFYDSLTSLPNRQLFIDRLEHTLAYSARTSKSGAVLFID 554 Query: 263 LPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT----- 317 L +F L+DT GH + + ++ + +AR+ +F LL + Sbjct: 555 LDNFKTLNDTMGHDLGDMLLQQVAMRIAGCLRE--SDTVARFGGDEFVVLLHELSGNHQE 612 Query: 318 -LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAG 375 +A ++ +++ + + IG+ + +++++ A+ A + Sbjct: 613 AAAQARLVSEKILISFAHPFQFSGYEHHTSASIGVTLFDQQPTTVDEILKRADLAMYQSK 672 Query: 376 LQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRI 435 G N +D + V + L L +P V +G++ E + R Sbjct: 673 AAGRNVIRFFDPEMQALIADRVEMEEDLRNGLRNDEFFLCYQPQVDNQGRLLGAEALLRW 732 Query: 436 FDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE------NLAIQVTVES 488 + + + ++P+ GL + L W ++ LA+ V+ + Sbjct: 733 RNPKRGMIPPSTFIPLAEDSGLIVSVGNWVMYAACKQLVLWAQQPLTSSLTLAVNVSAKQ 792 Query: 489 LIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQA 548 L + F + + L + KR+ +EL E+ + +I + + + +GV +++ Sbjct: 793 LRQMDFVDQIVEVL-NVTGANPKRLKLELTESLMVNNIEDVIAKMTELKNIGVGFSIDDF 851 Query: 549 GLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSR 608 G+ S S++K L ++ LK+ VR++ + ++ ++++ + QV A GV + Sbjct: 852 GIGYSSLSYLKLLPLDQLKIDQSFVRDVLTDPNDAVIARTIIALGKSLNLQVIAEGVETL 911 Query: 609 SEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRY 644 S+ + L G QG F+ P D + Q + Sbjct: 912 SQREFLDNYGCDAYQGYLFSKPVPADEFERDVVQTF 947 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 87/472 (18%), Positives = 190/472 (40%), Gaps = 11/472 (2%) Query: 169 ETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDV 228 E R + + GS P R +S + T ++ + + A D Sbjct: 436 EWRGELMNRKKDGSLFWQHAIISPIRDNSGVITHYISVKEDISIRKEYEERLVRQANYDA 495 Query: 229 KTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNL 288 TGL NR+ ++L + ++ +M++ L DF ++DT GH+ + Sbjct: 496 LTGLPNRILAMDRLKQAIAQAQRYNRKVALMLLDLDDFKKVNDTLGHAAGDLLLKEAALR 555 Query: 289 LSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPNNKMLDRDDMI 347 L + G +AR +F LLP AE +A +++ A + + + Sbjct: 556 LVDCLRE--GDTVARLGGDEFVLLLPDLTDTSSAEVVAEKILAACNQPFDVGGHEAYIAG 613 Query: 348 HIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQM 406 IGI + + D +M +A++A + +G + + + + ++R + + Sbjct: 614 SIGIAIFPDDERDPILLMRNADAAMYRSKREGKGVFRYFTPEMNARALEHMRMESQLRHA 673 Query: 407 LSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQ 464 + R +++ +P V G++ E + R + EVS +++P+ + GL Sbjct: 674 IERNEMKVHYQPLVDSGTGRLVGAEALLRWSNPVLGEVSPEQFIPLAEETGLILSIGAWV 733 Query: 465 ISRLIPLLRYWPEEN----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEA 520 + W + +A+ ++ + + +R +L + + +EL E+ Sbjct: 734 LRTACRDAASWQRPDHEIFVAVNISGKQFQKRTLVEIVRSSLNE-SGLPPACLELELTES 792 Query: 521 DVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRT 580 + +H +I+ + +LGV A++ G S S+++ + LK+ ++++ Sbjct: 793 VLLEHTQETLSIIQELESLGVGFAIDDFGTGFSSISYLRRFPFDTLKIDRSFIKDLGDNE 852 Query: 581 ENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQP 632 + LV+S++ + S +V GV + + + L G QG ++ P Sbjct: 853 GDADLVKSIIAMANSMSLKVVGEGVETHGQREFLRLSGCHIAQGWLYSRPIP 904 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 71/443 (16%), Positives = 174/443 (39%), Gaps = 15/443 (3%) Query: 201 TLLREIQNAR---EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGI 257 T+ +I + + + A D T L NR F +++ L + + Sbjct: 302 TIGTDISERKLAENALREQQSRLNYMAFHDALTSLPNRSLFYDRIYHGLARARRSNSRVA 361 Query: 258 VMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR- 316 +M++ + F +++D+ GH + + L+ + +AR +F +L Sbjct: 362 LMLLDIDRFKIVNDSLGHDAGDILLKAIAMRLTEGVR--DMDTVARLGGDEFVVVLEGIH 419 Query: 317 TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAG 375 + + +A +L+ + + + IG+ + G DT++++++A+ A A Sbjct: 420 DVDDVIFVANKLLATLSRPLDISGHSISATVSIGVSIFPEDGADTDELLKNADIAMYKAK 479 Query: 376 LQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCR 434 G N+ Y + + + + + + LY +P + + G + E + R Sbjct: 480 EAGKNNCQFYTKGMNATAVNYLLLENDLRRAIEQNQLALYYQPQIDLKTGDMTGVEALVR 539 Query: 435 IFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVES 488 VS A ++P+ + GL + + W + +A+ ++ Sbjct: 540 WQHPERGLVSPAHFIPLAEETGLIVPIGEWVLREACKQKKIWLDTGKNVGKVAVNLSPRQ 599 Query: 489 LIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQA 548 + F + + ++Q + K + +E+ E+ +H + +N +G +A++ Sbjct: 600 FRQKNFPGKV-EAILQETGLEAKYLELEITESCAMEHAGETINQLNQLNQMGTFLAIDDF 658 Query: 549 GLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSR 608 G S ++++ ++ LK+ + +I + + ++++ +V A GV + Sbjct: 659 GTGYSSLAYLQRFPIQKLKIDRSFIHDIHDDANDAAIAKTIIGLAHNMQLRVVAEGVETE 718 Query: 609 SEWQTLIQRGVTGGQGDFFASSQ 631 S+ + L +G QG +A Sbjct: 719 SQAEWLRAKGCDQVQGFLYAKPM 741 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 562 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 81/449 (18%), Positives = 172/449 (38%), Gaps = 17/449 (3%) Query: 206 IQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPD 265 I+ Q + A D T L NR ++L L + G G ++ + L Sbjct: 805 IRTDITQRKAAEDKSNYLALYDPLTNLPNRRLLLDRLTHALASAMRTGRGGALLFLDLDH 864 Query: 266 FNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIA 325 F L+DT GH + + L+ + G +AR +F +L + +E E+ A Sbjct: 865 FKTLNDTLGHDVGDLLLQQVAECLTACVRE--GDTVARLGGDEFVVILEGLSEQEVEAAA 922 Query: 326 ------GQLIKAVDTLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQG 378 +++ K + +GI + ++ ++++++ A+ A A G Sbjct: 923 QAEVVGEKILNKFIEPYQFKGYEYHITSSVGITLFGKNNLKSDELLKQADIAMYQAKKLG 982 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG 438 N+ + +D + E + V + + L + +L+ + V + E + R Sbjct: 983 RNALSFFDPKMQEGIQARVDMEHELRKALDKNEFQLFYQMQVGLSDRAVGAEALIRWIHP 1042 Query: 439 N-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW------PEENLAIQVTVESLIR 491 + E++ + G+ I L+ W L++ V+ + + Sbjct: 1043 ERGLIPPNEFVSIAEDCGMILSIGAWVIDTACAQLKRWEQSERTRSLTLSVNVSAKQFRQ 1102 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 F + + + + +EL E+ + HI ++ + +G+R +++ G Sbjct: 1103 ADFVEQVTTAIAR-HGINPMLLKLELTESALLDHIEDAVAIMNALKDIGIRFSLDDFGTG 1161 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S +++ L + LK+ VR+I NQ +V++++ + V A GV ++ + Sbjct: 1162 YSSLQYLRLLPLYQLKIDRSFVRDIASSIGNQAIVRTIIAMAHTLNLNVIAEGVETQVQQ 1221 Query: 612 QTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 L+ G QG F+ P+D Sbjct: 1222 GILLDSGCMHYQGYLFSEPVPIDAFEALL 1250 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 93/484 (19%), Positives = 188/484 (38%), Gaps = 14/484 (2%) Query: 165 QELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYA 224 E E +A + GS +Y P + T + + +T + A Sbjct: 417 AEKREGKAVLRNYRKNGSLFWNDLYIAPVKDDEGKTTHFVAAMSDITPMKQYETTLHRLA 476 Query: 225 AQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFT 284 + DV TGL NR ++L + + G V+++ L F ++DT GH + Sbjct: 477 SHDVLTGLPNRALLQDRLENAIAYSARNGHAVWVVLVDLDRFKFVNDTMGHQAGDVLLKI 536 Query: 285 LTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA---ESIAGQLIKAVDTLPNNKML 341 +++ L + +AR +F +LP + + ++++AV + Sbjct: 537 ISDRLQASVRE--SDTVARLGGDEFVLVLPECGDGPSGYSSDVIQRIMEAVVKPLTIQGS 594 Query: 342 DRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWR 400 + +GI + G D ++ HA+ A + G N++ Y ++ ++ +R Sbjct: 595 EFFLSCSMGIAVYPNDGADPTTLLAHADVAMYRSKELGRNNFQFYTPAMNDQALERLRIE 654 Query: 401 TLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSE 458 + + L+ +P V G + E + R V ++ + + GL Sbjct: 655 GELRHAIELNELVLHYQPQVDLHTGAIVGLEALVRWNHPILGMVQPGSFISLAEETGLII 714 Query: 459 EYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRI 513 + + W + +A+ ++ + ++DTL + + + + Sbjct: 715 PIGAWVLQTACRQAKAWQDMGFTQLRIAVNLSARQFTQASLLESIKDTLQET-GLEARFL 773 Query: 514 IIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLV 573 IEL E+ V I R +R + +LGV+++V+ G S +++K ++ LK+ V Sbjct: 774 EIELTESSVMADIERNILTLRDLKSLGVQLSVDDFGTGHSSLAYLKRFPIDTLKIDRSFV 833 Query: 574 RNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 R+I ++ +V S++ V A GV + S+ L +G QG +F P Sbjct: 834 RDIAINQDDASIVSSIISLAHNLKLNVIAEGVETASQMDILRAQGCNEIQGYYFCKPLPS 893 Query: 634 DTNV 637 D Sbjct: 894 DQIE 897 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 78/440 (17%), Positives = 168/440 (38%), Gaps = 16/440 (3%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 + +I Q + ++ A D T L NR ++ L ++ T V+ Sbjct: 669 AVFTDIT----QRKLSEERLQFLANHDALTHLPNRALLQERIDQALFRAQRNKTAIAVLF 724 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE 320 I L F +++DT GH + L + +AR +F L+ + Sbjct: 725 IDLDRFKIINDTLGHQTGDMLLQEAAKRLKECLRET--DTVARQGGDEFVVLVEDCGDTD 782 Query: 321 -AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQG 378 +IA +++ + + IGI + G DT +++HA++A A G Sbjct: 783 YLNTIARKIMATLAQPFILVGRELFISASIGISVYPDDGLDTASLLKHADAAMYRAKESG 842 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFD 437 N++ Y + + + + R L+ +P V R ++ E + R Sbjct: 843 KNTFRFYAAEANTNSVELLTLENNLRRAVERNEFVLHYQPKVDLRSQKIIGAEAVVRWQH 902 Query: 438 GN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE-----NLAIQVTVESLIR 491 +S +++P+ + GL + + W + +A+ ++ Sbjct: 903 PELGMLSPMQFIPLAEETGLIIDIGAWIMRESCRQAVEWQQLTGQNVRVAVNLSARQFRD 962 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 ++ + D L + + +E+ E+ + + R + V++ + LG V ++ G Sbjct: 963 ETLRQTIADALTE-SGLTPDCLELEITESMIMHNAERAREVLQHFHDLGAHVLIDDFGTG 1021 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S ++K ++ LK+ VR+I ++ + Q+++ +V A GV ++ + Sbjct: 1022 YSSFGYLKHFPIDSLKIDRSFVRDIPDDVDDMAITQAIIAMAHSLQIKVVAEGVETQEQL 1081 Query: 612 QTLIQRGVTGGQGDFFASSQ 631 L ++G QG F+ Sbjct: 1082 AFLKKQGCDQIQGFLFSEPL 1101 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 83/450 (18%), Positives = 177/450 (39%), Gaps = 16/450 (3%) Query: 203 LREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIR 262 +I + + I+ A D TGL+NR QL L + V+ + Sbjct: 767 FTDIT----ERKLAEAQIKHLAYHDPLTGLSNRFSLQTQLDQTLALARREQRTLAVVFLD 822 Query: 263 LPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEA 321 L F ++D+ GH+ ++ + L + ++AR +F +L A Sbjct: 823 LDRFKSINDSLGHALGDQLLVEVARRLRDNVR--DSDIVARLGGDEFVVVLTEVGDAAGA 880 Query: 322 ESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGN 380 +A +L+ A+ IGI + G D + +M++A++A +A QG + Sbjct: 881 ARVADKLLGALVPRYRIGGHALHTTASIGISLYPHDGDDADALMKNADTAMYHAKSQGRD 940 Query: 381 SWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFDG- 438 + + + + +++ + + G L+ +P + G+V E + R Sbjct: 941 NVQFFTPEMNQSVLKRLQFDHDLRVAVEAGQFELHYQPQINSTSGRVVKVEALVRWQHPR 1000 Query: 439 NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPR 493 VS AE++P+ + GL ++ LR W + + A+ ++ L P Sbjct: 1001 EGLVSPAEFIPIAEETGLILPLGEWVLNEACRQLRLWRDAGITDLTVAVNLSAHQLHSPA 1060 Query: 494 FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLV 553 + TL + + +E+ E+ + + ++ + LG+ ++++ G Sbjct: 1061 LIPMVARTLGN-HGLEGADLCLEITESVAMRDTTASIAQLQALRDLGIHLSIDDFGTGYS 1119 Query: 554 STSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQT 613 S S++K L ++ LKL V IE + + + + +V A G+ + ++ + Sbjct: 1120 SLSYLKLLPIDTLKLDQSFVCEIEFNPSDVAICAATIALAHSLGLEVVAEGIETETQRRL 1179 Query: 614 LIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 L QG F++ P + + ++ Sbjct: 1180 LASHRCDFMQGYLFSAPLPAERALAYIREQ 1209 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 81/445 (18%), Positives = 177/445 (39%), Gaps = 17/445 (3%) Query: 196 SSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTH 255 +S + +I + + + +R A+ D TGL NR F ++L + + Sbjct: 1057 TSHFVAVFTDIT----ERKKAEQDLRFLASFDTLTGLPNRTLFQDRLNHAITQAHRANNI 1112 Query: 256 GIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH 315 ++ + L F ++D+ GH + L + G +AR +F +L Sbjct: 1113 VALLFLDLDRFKHINDSMGHHVGDLLLKAAAKRLQNAVRE--GDTVARLGGDEFTIILEG 1170 Query: 316 RT-LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRN 373 K A I+ ++++A T + IGI + + + +++ A++A + Sbjct: 1171 VAKTKAATLISEKVLRAFQTPFLLEDKSLTISTSIGISLYPNDADNADSLIKFADTAMYH 1230 Query: 374 AGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELM 432 A G N++ Y L E +V ++Q + R L +P + R+G + E + Sbjct: 1231 AKSLGRNNFQFYTHKLNEIATRHVLLEAGLKQAIHRNELSLVYQPKFSLRDGSLTGLEAL 1290 Query: 433 CRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTV 486 R +S E++P+ + G+ + I+ L W +A+ ++ Sbjct: 1291 LRWHHTELGPISPVEFIPLAEETGIINQIGHWVINHACQQLAEWNALGFNNISMAVNLSA 1350 Query: 487 ESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVN 546 L + + + + + + +EL E+ + + ++ + ALG+ +A++ Sbjct: 1351 RQL-KADIISTI-EVALAVSGLPAQSLELELTESMIMGNPQDSVSILSKLKALGLTIAID 1408 Query: 547 QAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVR 606 G S S++K ++ LK+ VR+I ++ + +++ V A GV Sbjct: 1409 DFGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVE 1468 Query: 607 SRSEWQTLIQRGVTGGQGDFFASSQ 631 ++++ L +G QG + Sbjct: 1469 TQAQLNFLGLQGCDEVQGFLLSKPL 1493 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 88/476 (18%), Positives = 187/476 (39%), Gaps = 15/476 (3%) Query: 174 RILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLN 233 R+ EW + ++++ +ARE + I+ A D TGL Sbjct: 617 RVQARPTRIVQFQIESEWQDGVLERIRGTVQDVTSARE----AEAHIQYLAHYDSLTGLP 672 Query: 234 NRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFM 293 NR + NQ + L ++ V+ + L +F ++D+ GH + + L+ + Sbjct: 673 NRSAWMNQARSALSLAQRHQHILAVLFLDLDNFKTVNDSLGHPVGDRLLAAVAQRLAHCL 732 Query: 294 MRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGIC 352 AR +F ALLP T ++A ++A +++ A+ T + + IGI Sbjct: 733 REEDS--FARLGGDEFVALLPRVTRAEDAAAVARKMLDALATPVVIDDHELAPSVSIGIS 790 Query: 353 AWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGG 411 + G D + +++HA++A A G N++ + + + + + + + R Sbjct: 791 LFPSDGTDVDTLLKHADTAMYGAKEVGRNNFQFFVPEMNTRALERLLLENALRRAIERNE 850 Query: 412 PRLYQKPAVTRE-GQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLI 469 L+ +P V + + E + R + V A+++P+ GL + Sbjct: 851 LTLHYQPQVAATSDRPNGCEALVRWQHPDFGLVPPAQFIPIAEDSGLIVPLGEWVLREAC 910 Query: 470 PLLRYWPEENL----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQH 525 W L + ++ R F + L + + +RI +E+ E+ + Sbjct: 911 RQQVKWARSGLHLMVGVNISALQFRRADFVDSVVQVLAET-GANPERIELEITESALMDA 969 Query: 526 ISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLL 585 L +R + +G+ +A++ G S +++K L + LK+ V+++ E+ + Sbjct: 970 SDALSRRLRELANMGLSLALDDFGTGYSSLAYLKRLPIGRLKIDRSFVKDLPGDPEDAAV 1029 Query: 586 VQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 + + +V A GV + ++ L+ RG QG ++ + Sbjct: 1030 TAATLSLARDLGLEVVAEGVETVAQRDFLVARGCHTLQGYLYSRPLDVAAFEAWMQ 1085 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 92/471 (19%), Positives = 196/471 (41%), Gaps = 22/471 (4%) Query: 180 RGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFD 239 + + + I + + + TL+ +I Q ++ I+ A D TGL NR Sbjct: 442 QWTMITAVISDHEDEIINYVITLI-DIT----QRKAAESKIKQLAFYDQLTGLPNRQLLM 496 Query: 240 NQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGA 299 +L + + ++ G +G ++ + L DF L+DT GH ++ ++ L + R Sbjct: 497 ERLESARLNSQRNGQYGAILYLDLDDFKTLNDTRGHDTGDKFLTLVSQRLLDCVRRT--D 554 Query: 300 LLARYHRSDFAALLP------HRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICA 353 +AR +F +L K A+ + +++ + ++ + IG+ Sbjct: 555 TVARIGGDEFVIILEQLDSDLDIASKRADLLCRKILDTLSKPYYIDNIEHFSTLSIGVTL 614 Query: 354 WRSGQD-TEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGP 412 + +++++HA+ A A G N+ ++ + K + I L+R Sbjct: 615 FLGETKGIDELLKHADLAMYQAKGAGRNTHRFFNPEMQAKVLEHAAMANDIRHALTRNEF 674 Query: 413 RLYQKPAVTREGQVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPL 471 LY +P VT +GQ+ E + R +S E++P+ + GL + + + Sbjct: 675 TLYYQPQVTHDGQLTGAEALIRWQHPKQGTISPIEFIPIAEETGLILPLGEWVLDQACQV 734 Query: 472 LRYWPEENL------AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQH 525 L W L AI ++ + + F + + + L Q ++ R+ +EL E+ + + Sbjct: 735 LAVWQNSPLTDSLVLAINISAKQFHQTGFVQQVLEAL-QRYRANPDRLKLELTESMLHED 793 Query: 526 ISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLL 585 + + + GV +++ G S +++K L ++ LK+ VR++ + + + Sbjct: 794 LEDTITKMSQLKKYGVSFSLDDFGTGYSSLNYLKRLPLDQLKIDKSFVRDLLTNSHDADI 853 Query: 586 VQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTN 636 +++V + V A GV ++ + L G QG F+ PL+ Sbjct: 854 ARTIVSLAKSMNLAVIAEGVETQEQRLALASYGCLDFQGYLFSRPVPLEAF 904 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 79/449 (17%), Positives = 177/449 (39%), Gaps = 16/449 (3%) Query: 199 LDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIV 258 ++ ++ + + R + + A D TGL NR ++L + + T V Sbjct: 443 FISVFNDVTDRK----RYEAALEYQANHDDLTGLPNRNLLRDRLEHAITKATREHTKLAV 498 Query: 259 MMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RT 317 +++ L F ++D GH + + + +S + +AR +F L R Sbjct: 499 LLLDLDQFKRVNDGLGHKIGDTLIQRVASRMSQCVR--DSDTVARLGGDEFMILSTDIRD 556 Query: 318 LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGL 376 + A ++A +L++ + IGI + G + +++ +A++A A Sbjct: 557 ERAAATLAQKLLRQFRQKVAINGHEIIASASIGIAMFPKDGDNGDELFRNADTAMYRAKD 616 Query: 377 QGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRI 435 G N + Y + + R + + + L+ +P + G V E + R Sbjct: 617 VGRNGFQFYSAEMNNRMRERLYLEQSLRNAIGLHQLSLWYQPKLDLASGSVKSAEALIRW 676 Query: 436 FDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE-----NLAIQVTVESL 489 +S +++P+ + GL I L W ++ +AI ++ L Sbjct: 677 RHPQLGMISPGDFIPIAEETGLILPIGAWVIEEASRQLAKWRDQENQDIRVAINISAYQL 736 Query: 490 IRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAG 549 + + L + + IE+ E + + + ++ + +G+RVA++ G Sbjct: 737 SHGKLTDQVIQAL-DSLGLDPQSLTIEVTETAIMPQMDKAVCELQSLREMGIRVALDDFG 795 Query: 550 LTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRS 609 S +++K +++LK+ V +I E+ +V++++ + V A GV + + Sbjct: 796 TGYSSLTYLKRFPIDILKIDRSFVSDIADDEESGAIVKTIINLAHNLNMTVVAEGVETEA 855 Query: 610 EWQTLIQRGVTGGQGDFFASSQPLDTNVK 638 + + L G QG +F P + ++ Sbjct: 856 QLEFLRTNGCDEVQGYYFCKPLPSEECLE 884 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 90/452 (19%), Positives = 190/452 (42%), Gaps = 16/452 (3%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 + +I + ++++ A D TGL NR+ +++L + + G ++ Sbjct: 340 AIFNDITEHKNSRAQIE----FLAHHDALTGLPNRILLNDRLEMAITQVRRQGEKLGILF 395 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLK 319 I L F ++D+ GH ++ L+ + G ++R +F L P RT Sbjct: 396 IDLDRFKNVNDSLGHGVGDQILQEAAKRLTANVR--TGDTVSRLGGDEFVVLFPRVRTEG 453 Query: 320 EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQG 378 + +L + + + IGI + G+D ++++A++A A +G Sbjct: 454 NLADLTIKLREQLQLPYTVDGISLHITPSIGIAVYPDDGEDPNTLIKNADAAMYLAKEKG 513 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFD 437 N++ Y +L K ++ + + + G L+ +P + GQ+ E + R Sbjct: 514 RNNYQFYTPTLNAKTLDRLKLESDLRSAIDAGDFELHYQPQIIGSSGQLWGLEALIRWRH 573 Query: 438 -GNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIR 491 +S AE++P+ + GL + + + L W + +++ ++ + Sbjct: 574 RERGLISPAEFIPLAEETGLIVGLGDWVLVQAVKQLAEWRRQGHNHLVVSVNISALQFRQ 633 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 F ++ L + + I +EL E + Q + ++ + LG R+A++ G Sbjct: 634 GDFLDRVKHILQEAQLVP-DAIELELTETMLMQDVQSAIQTLKGLRELGFRIAIDDFGTG 692 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S ++++ L + +LK+ VR + + E+ +V+S++ + A GV +R+E+ Sbjct: 693 FSSLNYLRHLPINVLKIDQSFVREMLQEPESLAIVESIIALAQALGKETIAEGVETRAEF 752 Query: 612 QTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 L RG QG FFA P + Y Q+ Sbjct: 753 DVLQARGCRLMQGYFFARPMPPVIFDQWYQQQ 784 >UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q609J7_METCA Length = 712 Score = 560 bits (1445), Expect = e-158, Method: Composition-based stats. Identities = 92/449 (20%), Positives = 187/449 (41%), Gaps = 16/449 (3%) Query: 203 LREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIR 262 R+I RE R I+ A D T L NR+F +L +E + VM I Sbjct: 266 FRDITQRREAEDR----IKHLAHHDPLTNLPNRVFLHGRLEQAIELARREQNQVAVMFID 321 Query: 263 LPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLP-HRTLKEA 321 L +F ++DT GH + + L+ + ++ R +F ++ +R + Sbjct: 322 LDNFKRINDTLGHRIGDALLEQVAARLTENV--PGSQVVGRLGGDEFIVVITGNRVSTTS 379 Query: 322 ESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGN 380 ++A ++++++ + IGI + G E +M+HA++A +A +G N Sbjct: 380 AAMAERILESLCRPYTVEDYQLHSGASIGIAIYPADGNSAETLMKHADAAMYHAKSRGRN 439 Query: 381 SWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFDGN 439 ++ + ++ R + + L GG +L+ +P + G + E + R Sbjct: 440 TFEFFSQAINRGVRERLDIENGLRDALKHGGFKLHYQPQIDLTTGSICSVEALLRWRHPL 499 Query: 440 -EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLA-----IQVTVESLIRPR 493 ++ ++P+ + L I R LR W + +A + V+V+ L Sbjct: 500 LGVIAPDRFIPIAEETKLILPLGLWVIDRACHQLRAWRNDGIAGVRMAVNVSVKQLQDES 559 Query: 494 FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLV 553 F L ++++ I +E+ E+ + +++SR+Q +++ + G+ ++++ G Sbjct: 560 FFEAL-GSIVERHGLSGSDIELEITESAIMENLSRVQALLKSLQDYGITLSIDDFGTGYS 618 Query: 554 STSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQT 613 S +K L ++ LK+ V +IE N + ++ ++ A GV + ++ Sbjct: 619 SLGRLKLLPIQSLKIDRSFVHDIETDHGNAKICDGIIALGHSLGLKIIAEGVETDAQKNL 678 Query: 614 LIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 L G QG A P D K +Q Sbjct: 679 LQNSGCDAIQGFLIAKPLPADDVAKLITQ 707 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 560 bits (1445), Expect = e-158, Method: Composition-based stats. Identities = 85/444 (19%), Positives = 178/444 (40%), Gaps = 17/444 (3%) Query: 213 HSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDT 272 H + IRS A D TGL NR ++L L + G G ++ + L +F L+DT Sbjct: 689 HKAAEDEIRSLAFFDPLTGLPNRRLLMDRLQQALVASSRSGKAGALLFLDLDNFKNLNDT 748 Query: 273 WGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAG------ 326 GH + + L + G +AR +F +L + + E+ + Sbjct: 749 LGHDIGDLLLQQVAQRLKNCVRE--GDTVARIGGDEFVVMLEDLSAESIEAASQTEAVGW 806 Query: 327 QLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIY 385 ++I ++ + + + IG + S Q + + + A+ A A G N+ + Sbjct: 807 KIISTLNKPYHLEKFEVHSTPSIGATLFDSRPQIIDDLFKQADIAMYQAKKAGRNTMRFF 866 Query: 386 DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NEEVSS 444 D + + + + + R L+ + V + E + R VS Sbjct: 867 DPQMQDTLNTRTALEADLRKSIERREFNLFYQIQVDEMNRPVGAEALIRWIHPKRGMVSP 926 Query: 445 AEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL------AIQVTVESLIRPRFQRWL 498 AE++P+ + L + L+ W L A+ V+ + + F + Sbjct: 927 AEFIPLAEETDLILNIGLWVLQEACAQLKTWQNNPLTRNLVLAVNVSAKQFRQSDFATQV 986 Query: 499 RDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWI 558 R ++ ++ +EL E+ + ++I ++ + +GV+ +++ G S +I Sbjct: 987 R-VFVEKYAIDPSKLKLELTESMLQENIEDTILIMNALKEIGVQFSLDDFGTGYSSLQYI 1045 Query: 559 KELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRG 618 K+L + LK+ V +++ +++ +V++++ V A GV ++ + Q L+ +G Sbjct: 1046 KKLPLNQLKIDQSFVHDLDFDRDDKAIVRAIIAMAKSLQLDVIAEGVETQEQRQLLLNKG 1105 Query: 619 VTGGQGDFFASSQPLDTNVKKYSQ 642 T QG F+ P+ + Sbjct: 1106 CTHFQGYLFSKPLPIREFDALLER 1129 >UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B8HP13_CYAP4 Length = 1094 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 89/440 (20%), Positives = 188/440 (42%), Gaps = 12/440 (2%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + + I A D+ TGL NR FD++L L D + V + L F +++D Sbjct: 639 ARKQAELTIHYQAFHDLLTGLPNRALFDDRLNQALADARRYQHLLAVFFLDLDRFKVIND 698 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIK 330 T GH+ ++ + L + +AR+ +F LLPH +T ++ IA +L+ Sbjct: 699 TLGHAIGDQLLQQVAQRLLPCLREI--DTIARWGGDEFTLLLPHVQTPADSVKIAERLLA 756 Query: 331 AVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSL 389 ++ + K + +GI + G+D ++ +A++A A +G N Y L Sbjct: 757 SLKPPFSLKGHNLHITASLGIALYPHDGEDGTTLLRNADAALYRAKEEGRNGLYCYTPML 816 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEY 447 +G + + + + L + +Y +P + G++ E + R VS + Sbjct: 817 NSRGHELLALESELHKALEQQELDVYYQPQINAATGEILRLEALVRWQHSQLGLVSPQTF 876 Query: 448 MPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTL 502 + + + GL + + R W A+ ++V +P + + +TL Sbjct: 877 IGLAEENGLIMPIGQWVLETACHQCRQWQARGFPGLGTAVNLSVRQFQQPHLVQQVAETL 936 Query: 503 MQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELN 562 Q R+ +E+ E Q+++ + ++ ++ +GV +A++ G S +++++ Sbjct: 937 -QYTGLAADRLELEITETTAMQNVNLTRTLLHELDQMGVGIALDDFGSGYSSLNYLRQFP 995 Query: 563 VELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGG 622 + +K+ ++ + ++Q +V++++ G + V A GV S+S+ + L G Sbjct: 996 LHSIKIDRTFIQELPYSVQDQAIVKAVIALGRGLNLSVVAEGVESQSQLKVLRSLGCDII 1055 Query: 623 QGDFFASSQPLDTNVKKYSQ 642 QG FF + Q Sbjct: 1056 QGYFFGPPIAAAAMTQLLEQ 1075 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 85/470 (18%), Positives = 186/470 (39%), Gaps = 14/470 (2%) Query: 176 LNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNR 235 L E G+ ++ P S T + N + + + A+ D TGL NR Sbjct: 223 LERENGAQQSVELFLAPVENESGDVTHFIGVLNDVTARTHAEKRLIHQASHDALTGLPNR 282 Query: 236 LFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMR 295 ++++ + G VM + L F +++D++GH+ + + N +S + Sbjct: 283 NLLNDRITHAIARSR--GRLTAVMFLDLDRFKLVNDSYGHAVGDALIREVANRVSACLR- 339 Query: 296 YPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICA- 353 G +AR +F LL ++++A +A +L + L+ IG+ Sbjct: 340 -AGDTVARLGGDEFVVLLEDLASIEDAARLAAKLRDRLSESVRIGSLELPLSASIGVALA 398 Query: 354 WRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPR 413 R G+D E ++++A+ A A +G N++ Y + R + + + + L+ G Sbjct: 399 PRDGRDPEMLLKNADIAMYRAKERGRNNYCFYGPEMDHHARRRLTVESELRRALAGGELE 458 Query: 414 LYQKPAVT-REGQVHHRELMCRIFDGNE-EVSSAEYMPMVLQFGLSEEYDRLQISRLIPL 471 + +P V G + E + R + E++ + + GL + Sbjct: 459 AHYQPQVDLATGALTGAEALVRWRHPERCLLLPGEFIAVAEETGLIVPLGEQVLRAACRQ 518 Query: 472 LRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHI 526 W E +A+ ++ + + D L + + ++ +E+ E+ Sbjct: 519 STRWREAGRPDLKVAVNLSGHQFRQHDLVEQVCDILAET-GAHAAQLELEITESVAMADA 577 Query: 527 SRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLV 586 + + G+ +A++ G S S++K ++ LK+ ++ I ++ +V Sbjct: 578 DGSVATLAGLRRQGIALAIDDFGTGYSSLSYLKRFPIDTLKIDRSFIQGIPADGDDTAIV 637 Query: 587 QSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTN 636 Q+++ + A GV + ++ + L+ +G GQG F + P + Sbjct: 638 QAIIAMARSLRLSLLAEGVETPAQREFLVAQGCRSGQGFLFGRAMPAEDF 687 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 89/450 (19%), Positives = 180/450 (40%), Gaps = 16/450 (3%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 T+L ++ R ++ + A D T L NR D++L + + G V+ Sbjct: 315 TVLHDVSVTRA----MELKMAHLAQHDFLTDLPNRRVLDDRLRQAISLARRQGKQLAVLF 370 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLK 319 + + F ++D+ GH ++ ++ L+T + +AR +F LL T Sbjct: 371 VDIDRFKHINDSLGHGMGDKALQSMAERLTTCVR--ASDTVARQGGDEFVILLAEVTTAD 428 Query: 320 EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQG 378 +A +A +++ AV + IGI D E +++HA+ A A +G Sbjct: 429 DAAIVAKKILSAVALPHRIGRHELQISASIGISTCPNDADDAETLIKHADIAMYQAKEKG 488 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFD 437 N++ + + E+ + + L R L+ +P + G + E + R Sbjct: 489 RNNYQFFRADMNERVLQRQSLESSLRLALERQEFLLHYQPKMNLETGHITGMEALIRWRH 548 Query: 438 GN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIR 491 V A ++ + GL + R + ++ W L A+ V+ R Sbjct: 549 PELGLVPPASFIGVAEDCGLMQPIGRWVLQEACRQVKEWMVAGLNPVPVAVNVSAVEFRR 608 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 F + TL + + + + +EL E + + V+ + + GV++A++ G Sbjct: 609 KHFFDGVISTLRETD-LDPRYLELELTETVLMKEAEPTIAVLHALKSAGVKLAIDDFGTG 667 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S S++ L V+ LK+ V ++ RT+N +V +++ + V A GV ++ + Sbjct: 668 YSSLSYLTRLPVDTLKIDRSFVTDVTTRTDNAAIVSAIIGMGKSLNLNVIAEGVETQEQL 727 Query: 612 QTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 L GQG +F+ + + + Sbjct: 728 ALLRSHCCAEGQGYYFSRPVSVPAVAELLN 757 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 82/449 (18%), Positives = 176/449 (39%), Gaps = 21/449 (4%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 R+I + ++ I+ A D T L NR ++L L + G ++ Sbjct: 565 ATFRDIT----ANKAAESEIKKLAFYDPLTLLPNRRLLTDRLNHALASSARNRNIGALLF 620 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL-- 318 I L +F L+DT GH + + L + + LAR +F +L + + Sbjct: 621 IDLDNFKTLNDTLGHDMGDALLKQVALRLKSCIRE--DDTLARLGGDEFVVILENLSELA 678 Query: 319 ----KEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRN 373 +AE I +++ A++ + + IG+ + +++M+ A+ A Sbjct: 679 MDAATKAELIGEKILAALNQVYPLASQEYHGAASIGVTLFAGHALSIDELMKQADIAMYQ 738 Query: 374 AGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMC 433 + G N+ +D + + + + + L+ + + G E + Sbjct: 739 SKKSGRNTLRFFDLDTQKIINERAELEIELRKAVDKKQLHLHYQIQLNSVGTPLSAEALI 798 Query: 434 RIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN------LAIQVTV 486 R +S A ++P+ GL + + L W +E LA+ V+ Sbjct: 799 RWVHPVRGLISPAHFIPLAEDTGLILPIGQWVLDTACAQLHSWQDERFTQDLTLAVNVSA 858 Query: 487 ESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVN 546 + + F +++T+ Q K + +EL E+ + ++I + + + +G++ +++ Sbjct: 859 KQFHQKNFVALVKETV-QRHAINPKLLKLELTESMLVENIEDIIVTMNALREMGIQFSLD 917 Query: 547 QAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVR 606 G S ++K L + LK+ VR + + ++ +V+++V + V A GV Sbjct: 918 DFGTGYSSLQYLKRLPLNQLKIDQSFVRELSSSSSDRAIVRTIVAMAESLNLNVIAEGVE 977 Query: 607 SRSEWQTLIQRGVTGGQGDFFASSQPLDT 635 + + L G QG F P++ Sbjct: 978 TEEQHTLLQDIGCNYYQGYLFGKPMPIEQ 1006 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 559 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 86/440 (19%), Positives = 179/440 (40%), Gaps = 12/440 (2%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 R++++IR A D T L NRL FD QLA L + ++ V + L F +++D Sbjct: 423 AQKRVESIIRYQACHDALTHLPNRLLFDEQLALALANSKQQPELLGVAFLDLDRFKVVND 482 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIK 330 T GH ++ + L + +AR+ +F L PH + E IA +++ Sbjct: 483 TLGHGIGDQLLQQVATRLKQCLRNC--DTIARWGGDEFTLLFPHLTSTDEITKIAHRILD 540 Query: 331 AVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSL 389 + + +GI +D + +++HA++A A QG N++ ++ + + Sbjct: 541 KLSIPFVIDNQELYVTASLGIALCPYDAEDAQTLLKHADAAMYRAKKQGRNNFQVFAEEM 600 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEY 447 + + + + L + LY +P V G++ E + R V ++ Sbjct: 601 HREALNQLTLEADLRRALIKEEFLLYYQPQVEISTGKIVGLEALIRWQHPTLGFVPPDQF 660 Query: 448 MPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTL 502 +P+ + GL + + + W E L A+ ++ + + + TL Sbjct: 661 IPLAEEIGLIAPIGQWVLQTACIQHQSWQAEGLPPVRIAVNLSARQFHQSQLINIILQTL 720 Query: 503 MQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELN 562 + + + + +E+ E+ Q + ++ + +G+ + ++ G S + +K Sbjct: 721 -ETTEIDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITIDDFGTGYSSLNVLKHFP 779 Query: 563 VELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGG 622 + LK+ V++I + + + + Q++V G +V A GV + + L Sbjct: 780 LNTLKIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGVETPQQLSFLRSIHCDLA 839 Query: 623 QGDFFASSQPLDTNVKKYSQ 642 QG +F P K Q Sbjct: 840 QGYYFCPPVPAIEIAKLLRQ 859 >UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WS3_RHOFD Length = 1034 Score = 559 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 91/446 (20%), Positives = 176/446 (39%), Gaps = 17/446 (3%) Query: 206 IQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPD 265 I+ + + I A D+ TGL NR +++L +L + HG ++ I L + Sbjct: 586 IKEDITKRKAAEAEIEHLAFYDLLTGLPNRRLLNDRLQQVLAVGTRSRRHGALLFIDLDN 645 Query: 266 FNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE----- 320 F L+DT GH Q + + L+ + +AR DF +L + ++ Sbjct: 646 FKNLNDTQGHEQGDVLLQQVAQRLNFCVREC--DTVARLGGDDFVVMLQDLSEQQTEAAT 703 Query: 321 -AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDT-EQVMEHAESATRNAGLQG 378 AE + +++ A+ +G+ + + QDT E++++ A+ A A G Sbjct: 704 QAEGVGQKILDALHQPYPFGHFTHHGSASVGVALFNASQDTVEELLKRADLALYQAKDAG 763 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG 438 N+ +D + + L LY +P V G++ E + R Sbjct: 764 RNTLRFFDPDMQAVISARAEMEADMRLGLQENQFLLYYQPQVNHAGRLIGVEALVRWQHP 823 Query: 439 -NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP------EENLAIQVTVESLIR 491 V+ A ++P+ GL + + L+ W + +A+ V+ Sbjct: 824 LRGLVAPAHFIPLAEDTGLILPLGQWVMEAACRQLQLWRTQAHTAQLTIAVNVSALQFHG 883 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 F + TL + + R+ +EL E+ + + + + + + A GV +++ G Sbjct: 884 ESFVSDVLATLART-GAPADRLKLELTESLLVKDVDGVIAKMVALKAHGVGFSLDDFGTG 942 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S S++K L ++ +K+ V + ++ LV++ V G V A GV ++ + Sbjct: 943 YSSLSYLKRLPLDQIKIDQSFVSDALSNPKDAALVRATVAMGRGLGMMVIAEGVETQMQR 1002 Query: 612 QTLIQRGVTGGQGDFFASSQPLDTNV 637 L G QG FF P+ Sbjct: 1003 DFLEGEGCLNFQGYFFGRPVPVAELA 1028 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 559 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 93/488 (19%), Positives = 185/488 (37%), Gaps = 17/488 (3%) Query: 165 QELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYA 224 Q+ + R ++ + G + + + T + Q D I A Sbjct: 498 QQWKQARGELVIYRKDGGSFWVDLEIVSVAAQNGDLTHWVAVGRDITQRKAADEKIHHLA 557 Query: 225 AQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFT 284 D T L NR ++L L D G++M I L +F +L+DT GHS+ + Sbjct: 558 FYDPLTELPNRQLLLDRLEQALADCTITRQEGVLMFIDLDNFKILNDTVGHSKGDLLLQK 617 Query: 285 LTNLLSTFMMRYPGALLARYHRSDFAALL------PHRTLKEAESIAGQLIKAVDTLPNN 338 + L + + +AR +F +L P ++A+ +A +++ + + Sbjct: 618 VAVRLKGCVRKL--DTVARLGGDEFVVMLQDLGTQPEAATRKAQIVAEKVLATLREPYDL 675 Query: 339 KMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNV 397 IG+ + + Q ++++ A+ A A G N+ +D + N Sbjct: 676 AGYQHYSTSSIGVTPFNARQGSVSELLKQADLAMYQAKTMGRNTVCFFDPDMQASVSANA 735 Query: 398 RWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGL 456 T + L ++ +P V RE ++ E + R VS AE++P+ + GL Sbjct: 736 ALSTDLRAGLREHQFLVHYQPQVDREQRITGVEALLRWKHPQRGMVSPAEFIPVAEETGL 795 Query: 457 SEEYDRLQISRLIPLLRYWPEEN------LAIQVTVESLIRPRFQRWLRDTLMQCEKSQR 510 + + + L W + +A+ V+V P F + + Q Sbjct: 796 ILPLGQWVLEQACLQLAVWQKRPETAGLSIAVNVSVRQFRHPDFVDMVMAAIKHT-GIQP 854 Query: 511 KRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHP 570 + +EL E+ + + + + ALGV +A++ G+ S S++K L ++ LK+ Sbjct: 855 HNLKLELTESLLADRMEIAIAKMGTLKALGVTLALDDFGMGYSSLSYLKRLPLDQLKIDK 914 Query: 571 GLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASS 630 + ++ + + +++ V A GV + ++ L G QG F Sbjct: 915 SFIADVFSDPNDAAICSAIISLAQSLGLDVIAEGVETEAQRSFLAGLGCGYYQGFLFCPP 974 Query: 631 QPLDTNVK 638 P+ Sbjct: 975 LPIAEFEA 982 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 559 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 80/445 (17%), Positives = 172/445 (38%), Gaps = 14/445 (3%) Query: 206 IQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPD 265 ++ Q + + A D TGL NR + L L ++ V+++ L Sbjct: 794 VKEDITQRKLNEKRLEYMATHDGLTGLANRTLLYDHLEIALHQSQRSKKLVAVILLDLDR 853 Query: 266 FNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESI 324 F +++D+ GH ++ + L ++ +AR +F LL R A I Sbjct: 854 FKVINDSLGHLVGDQVLKAVGQRLKQYVR--STDTVARLGGDEFVVLLTDVRDTTAAGKI 911 Query: 325 AGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWA 383 A L++ ++ + GIC D ++ +A+ A A +G + Sbjct: 912 AHNLLRKLNEPFFLHGRELYVSASFGICLSETDNVDGTILLRNADIAMYKAKAEGCGLY- 970 Query: 384 IYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCRIFDGN-EE 441 Y + E + + Q L + +LY +P V G++ E + R Sbjct: 971 FYSHEMNEHLIKTLEMENSLRQALEKNEFQLYYQPKVEHATGRIIGCEALLRWRHPQRGM 1030 Query: 442 VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW-----PEENLAIQVTVESLIR-PRFQ 495 + +E++P+ + GL + ++ + W P +A+ ++ + Sbjct: 1031 IPPSEFIPLAEETGLIVQIGHWVLAEACRQSKIWETEGLPPLTMAVNISARQFYQGENLI 1090 Query: 496 RWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVST 555 + ++ TL + + ++ +EL E+ V + + +R + LGV ++++ G S Sbjct: 1091 QAVKSTLERSQLVP-SQLELELTESMVMKDAVNAERTMRKIKQLGVSLSLDDFGTGYSSL 1149 Query: 556 SWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLI 615 ++++ V+ LK+ + +I + ++ S++ Q A GV + + + Sbjct: 1150 NYLRSFPVDSLKIDRSFILDIASDASSAAILNSIIAIAHTLGLQTVAEGVENNDQLALVA 1209 Query: 616 QRGVTGGQGDFFASSQPLDTNVKKY 640 G QG F+ P + V + Sbjct: 1210 NCGCNYIQGYLFSRPLPPEDFVALF 1234 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 77/452 (17%), Positives = 181/452 (40%), Gaps = 17/452 (3%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 ++++I +E R IR A D TGL NR F+++L ++ + + +M + Sbjct: 234 VIQDITRRKEAEER----IRELAYYDSLTGLANRTLFNDRLDQVMARSRRRQSRFALMFL 289 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKE 320 L F ++DT GH+ + L+ + +AR +F +L + Sbjct: 290 DLDRFKGVNDTLGHAVGDAMLRQAAERLNECLRE--NDTVARLGGDEFVIILSDYKEDAN 347 Query: 321 AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGG 379 +A +++KA+ + + + + +GI + G + ++ HA+ A A GG Sbjct: 348 LPRVADKILKALSSPFDLGVREVYSSTSVGIAIYPDDGDEATDLLRHADMAMYAAKESGG 407 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDG 438 +++ Y + + + + + L + + +P + +V E + R Sbjct: 408 DTFRFYSSEMNARAVSRMDMEANLRRALEQEEFFIEYQPQIDLITNKVAGVEALLRWQHP 467 Query: 439 N-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRP 492 + +++ + + L + R+ W +E + I V+ ++P Sbjct: 468 QLGVIPPTQFIGLAEETNLILPLGEWVMRRVFEQCVMWKQEGYLPFRVGINVSGRQFVQP 527 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 F + L + + + + E+ E+ V + + + + LG+ +A++ G Sbjct: 528 DFVDMVCRLLDET-GAAPELLEFEITESVVMKDVDAAVLTLEALKKLGINMAIDDFGTGY 586 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S S +K L + LK+ + +++ +++ +V++ + V A GV + ++ Sbjct: 587 SSLSCLKHLPLNRLKIDKSFISDLQDNADDRAIVEATIAMAKRLELGVTAEGVETEGQYG 646 Query: 613 TLIQRGVTGGQGDFFASSQ-PLDTNVKKYSQR 643 + +R QG +F+ P + +R Sbjct: 647 FVQKRECDEVQGFYFSRPLSPSEVADAWLIKR 678 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 83/431 (19%), Positives = 159/431 (36%), Gaps = 11/431 (2%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + IR A DV TGL NR + LL E+ + V+ + L F ++D Sbjct: 144 AQKAAEQRIRELADYDVLTGLPNRRLLRERFEQLLAAAEREKSEIAVIFLDLDHFKRVND 203 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKA 331 + GHS +E + L + + R LAR +F +P A +A +L++ Sbjct: 204 SLGHSVGDELLCEVARRLDSVVRRI--DTLARLGGDEFIFAMPGFHTAAAVEVARRLVEV 261 Query: 332 VDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLP 390 + +GI + G+D E ++ +A++A A G N++ Y + Sbjct: 262 FSRPFEVAGHELTVTPSLGISIYPHDGRDLETLLRNADTAMYRAKEMGRNAFQFYSSEMN 321 Query: 391 EKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYM 448 + + + + L + L+ +P V G + E + R + ++ Sbjct: 322 TTTLDRLLMESNLRRALVQNEFILHYQPLVNLETGLIIGVEALIRWLHPELGLIMPDRFI 381 Query: 449 PMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLM 503 + + GL + + W + L A+ V + F + L Sbjct: 382 HVAEETGLINPIGDWVLCEACRQAKAWCDAGLPPICMAVNVAPVQFRQAGFVEMVAGALA 441 Query: 504 QCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNV 563 R+ +EL E V + ++ +GV ++++ G S +++K V Sbjct: 442 -TSGLDASRLELELTERTVMHDADINMGTLSALHRMGVELSLDDFGTGYSSLAYLKRFPV 500 Query: 564 ELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQ 623 LK+ V ++E ++ + ++V V A GV + L + G Q Sbjct: 501 GKLKIDRSFVNDLETDPDDWAIASTIVSMGRSLRMTVLAEGVEKVEQLALLRKMGCDMAQ 560 Query: 624 GDFFASSQPLD 634 G +F+ D Sbjct: 561 GYYFSRPMSAD 571 >UniRef50_C6X8Z9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X8Z9_METSD Length = 828 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 99/492 (20%), Positives = 210/492 (42%), Gaps = 12/492 (2%) Query: 154 AVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQH 213 A + QR +A E+ ++ ++ + P R++S + + ++ Sbjct: 335 AEEYQQRIMAVMASGESDTLELITQYGEEQLVHLVRIVPERSASGAVMGAMTVASDVTEN 394 Query: 214 SRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTW 273 SR I A D+ T L NRL F+ QL L+E ++ I L +F ++DT Sbjct: 395 SRYRKRIEQLAYHDILTELPNRLLFNQQLQILIEQTPINKHGFCLLFIDLDNFKTINDTL 454 Query: 274 GHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAV 332 GHS ++ ++ + + + +LAR +FA LPH + +A +A ++I A+ Sbjct: 455 GHSVGDKLLIEVSRRIRQLLGK--DDMLARMGGDEFAISLPHCLSRLDAALLAARIIDAL 512 Query: 333 DTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPE 391 + + +GI + + +++HA+ A +A QG N++ Y+ L Sbjct: 513 NVPFEVSSIKFFVSASMGIAFYPEDSSHLDDLLKHADLAMYHAKRQGRNNFQFYNQELTV 572 Query: 392 KGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFD-GNEEVSSAEYMP 449 + L+ Q L++G +LY +P + G++H E + R V +++P Sbjct: 573 NAAERLLMENLLRQALAKGELQLYYQPIMELATGELHGAEALLRWNSFDLGMVGPDKFIP 632 Query: 450 MVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQ 504 + + G+ + + W LAI ++ ++ F + D L + Sbjct: 633 IAEERGMIVDIGAWVLREGCRTAVAWNALRSQPCVLAINLSSRQFMQQDFLSRITDCLQE 692 Query: 505 CEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVE 564 + + E+ E+ + ++ + ++++G+ +A++ G + ++ + V Sbjct: 693 T-GCHPQWLKFEITESLLLHDSDHIRQTLEALHSIGITIAIDDFGTGYSALGYLNKFPVS 751 Query: 565 LLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 +K+ + +I TE+ LLV++++ ++ A GV + + + L Q G QG Sbjct: 752 QVKIDRSFISDIATNTESALLVKAIIAMADSLGKELVAEGVETAEQAKLLSQLGCQYVQG 811 Query: 625 DFFASSQPLDTN 636 ++ PL+T Sbjct: 812 YYYGRPVPLETF 823 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 90/455 (19%), Positives = 180/455 (39%), Gaps = 18/455 (3%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 + +I ++ ++L A D TGL NRL +QL +E ++ G V+ I Sbjct: 342 VFTDISQIKQSEAQLA----QLAHYDPLTGLPNRLLAQSQLHQAIERAQRHGRLVGVLYI 397 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKE 320 L F ++D+ GH +E L + + LAR +F +L R L + Sbjct: 398 DLDRFKNVNDSLGHPVGDELLIKLAERMKKRVREE--DTLARLGGDEFLLVLEDVRDLGD 455 Query: 321 AESIAGQLIKAVDTLPN-NKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQG 378 +A LI + + + IGI + + ++++H++ A A +G Sbjct: 456 PAFVAQSLINLLTSPFVLPSGHEIFINASIGISLFPEDASNATELIQHSDMAMYQAKKEG 515 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFD 437 N++ + ++L + + LS L+ +P V R G V E + R Sbjct: 516 RNTYRYHTEALSVAANERLIMENRLRYALSAEELILHYQPLVDARTGYVVGVEALVRWQP 575 Query: 438 GNE-EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIR 491 + V +++P+ + GL + R W + L A+ ++V Sbjct: 576 PGKAMVPPGKFIPIAEETGLIVPLGEWVLRTACKQARAWIDAGLSPLVMAVNLSVRQFQS 635 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 ++ L + + + +EL E+ +H+ + + + LGV +A++ G Sbjct: 636 ENLVGMVQRILEETQ-LPADYLELELTESMFMEHVEQSIETLNKLKTLGVHLAIDDFGTG 694 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S ++K ++ LK+ VR++ ++ + +++ G V A G+ S + Sbjct: 695 YSSLIYLKRFPIDKLKIDQRFVRDLADDHNDREIAATIIAMARGLKLGVLAEGIESEEQL 754 Query: 612 QTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV 646 L Q+ QG F P ++ + + +SV Sbjct: 755 AFLRQQDCDYYQGYLFHRPVPA-IELEAWLREHSV 788 >UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Y8_9PROT Length = 812 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 85/485 (17%), Positives = 186/485 (38%), Gaps = 21/485 (4%) Query: 175 ILNGERGSNVLGTIYEWPP--RTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGL 232 I + + + + R+ + + + + E+ + D LI A D T L Sbjct: 326 IWDKRKTGEIYAKLAHISILRRSDGGVYRHVAQFSDITEKKQK-DELIFWQANYDALTCL 384 Query: 233 NNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTF 292 NR +++LA L ++ G +M + L F L+DT GH+ + + + + Sbjct: 385 PNRRLLNDRLAHALAANKRNEDCGALMFLDLDKFKTLNDTLGHAYGDMLLVEVARRIKSC 444 Query: 293 MMRYPGALLARYHRSDFAALLPHRTLK------EAESIAGQLIKAVDTLPNNKMLDRDDM 346 + +AR +F LL + A IA ++ ++ T Sbjct: 445 VREV--DTVARIGGDEFVVLLENLGADIKDATQAAAHIAEKIRASLSTPYQLHDKMHHSS 502 Query: 347 IHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQ 405 IG+ +G+ E++++ A+ A A G N+ +D + + + + Sbjct: 503 PSIGVSLIHCNGESAEELIKQADMAMYQAKEAGRNAVRFFDPQMQQSVETIAALESDLRH 562 Query: 406 MLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQ 464 + +L+ + + E + R VS A+++P + L + Sbjct: 563 AVHERQLQLFYQIQLDHTHHPVGAEALLRWIHPVRGMVSPAQFIPFAEESSLILDIGHWV 622 Query: 465 ISRLIPLLRYW------PEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELA 518 + + W + LA+ ++ +P F + + + Q R+ +EL Sbjct: 623 LDEACRQIAAWSHQERTRDLVLAVNISARQFKQPDFVEQVGAMI-RKHAIQPARLKLELT 681 Query: 519 EADVGQHISRLQPVIRLVNA-LGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIE 577 E+ + + + + + LG+ ++++ G S S++K L ++ +K+ VR++ Sbjct: 682 ESIALEELDVIITKMHALRNGLGISLSLDDFGTGYSSLSYLKRLPLDQIKIDQSFVRDMT 741 Query: 578 KRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNV 637 + + ++V+++++ +V A GV + ++ L Q G QG F PL Sbjct: 742 VDSGDAVMVKTIIDMAHNFGIEVIAEGVETAGQFFLLKQYGCLLFQGYLFGRPVPLREFE 801 Query: 638 KKYSQ 642 Q Sbjct: 802 ALLQQ 806 >UniRef50_C6WW34 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WW34_METML Length = 623 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 100/482 (20%), Positives = 198/482 (41%), Gaps = 21/482 (4%) Query: 178 GERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLF 237 + ++ + E + A L ++I +E + I+ A D+ T L NRL Sbjct: 143 KDYSVILIRKLEEKTLQLEEANQFLQQDIARRKE----AEDKIQHLAYYDLLTNLPNRLL 198 Query: 238 FDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYP 297 ++L L + HG ++ I L F L+DT GHS + + L T M Sbjct: 199 LIDRLQHTLAMSARHQNHGALLFIDLDHFKTLNDTKGHSVGDLLLVEVAKRLQTCMRE-- 256 Query: 298 GALLARYHRSDFAALLPHRTLK------EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGI 351 G LAR +F +L + +AE++ ++I A++ +G+ Sbjct: 257 GDTLARLGGDEFVVILQDLSEDSSQAAVQAETVCAKIISAINLPYYLDSYLYHSSTSVGV 316 Query: 352 CAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRG 410 C +R+ + +++++ A+ A A G N+ YD ++ + + + + Sbjct: 317 CLFRNQEFTVDELLKRADIAMYQAKSAGRNTQRFYDPTMQAALEARAALESDLRLAIKKN 376 Query: 411 GPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLI 469 RLY + V G VH E + R V +++P+ + GL + Sbjct: 377 QFRLYYQMQVDHSGNVHGAEALIRWQHPQKGLVPPLQFIPLTEETGLIIPIGHWVMETAC 436 Query: 470 PLLRYWPEENL------AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVG 523 ++ W + L A+ V+ P F + L + K + + +EL E+ V Sbjct: 437 AQIKRWESDPLTRNLQVAVNVSACQFHDPSFVERAIEMLSR-HKIKPGNLKLELTESLVL 495 Query: 524 QHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQ 583 ++ ++ + + GV +++ G S S++ +L ++ LK+ +RN+ + Sbjct: 496 DNVEEAIMKMQALKSYGVLFSMDDFGTGFSSLSYLTKLPLDQLKIDQSFIRNMCMNNRDA 555 Query: 584 LLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 ++VQ+++ + +V A GV S ++ + L Q QG F+ P+D K Q Sbjct: 556 VVVQTIIGMANNLGIEVIAEGVESETQREFLEQNKCNLCQGYLFSQPLPIDAFENKLRQI 615 Query: 644 YS 645 ++ Sbjct: 616 HA 617 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 94/451 (20%), Positives = 180/451 (39%), Gaps = 17/451 (3%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 + +I ++ +RL A D TGL NRL ++L +E + G + + Sbjct: 674 VFTDITQIKQSEARLA----HLAHYDALTGLPNRLLVQSRLHHAIERTLRHGNQIAALYL 729 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKE 320 L F ++D+ GH +E L L + LAR +F +L E Sbjct: 730 DLDRFKNVNDSLGHPIGDELLVMLALRLKKRLREE--DTLARLGGDEFLVVLEDIKDSNE 787 Query: 321 AESIAGQLIKAVDTLPN-NKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQG 378 +A LI + T + + IGI + ++++HA+ A A +G Sbjct: 788 PAMVAQTLIDLLATPFSLPSGHEIFINTSIGISLFPTDANSVTELIQHADMAMYLAKQEG 847 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFD 437 N++ + D+L + T + Q LS G L+ +P + R+GQV E + R Sbjct: 848 RNTYRYHTDALSIAANERLVLETQLRQALSAGEFVLHYQPLIDARKGQVMGVEALVRWQP 907 Query: 438 GNE-EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIR 491 ++ VS +++P+ + GL + R W + + +A+ ++V Sbjct: 908 PDKAMVSPGKFIPIAEETGLIVPLGEWVLRTACAQGRAWMDADFPPLVMAVNLSVRQFQS 967 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 +R L + K + +EL E+ +H + +++ + +LGVR++++ G Sbjct: 968 ENLVELIRQVLEET-KLPAACLELELTESMFMEHAEQSIEILKTLKSLGVRLSIDDFGTG 1026 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S +++K ++ LK+ V + ++ + +++ V A GV S + Sbjct: 1027 YSSLTYLKRFPIDKLKIDQSFVHGLAYDPNDREIAATIIAMARNLKLDVLAEGVESEQQL 1086 Query: 612 QTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 L Q G QG F P + + Sbjct: 1087 DILNQHGCDYYQGYLFHRPVPAQELEVWFRE 1117 >UniRef50_Q3SIU2 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SIU2_THIDA Length = 1012 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 100/499 (20%), Positives = 203/499 (40%), Gaps = 24/499 (4%) Query: 156 RWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSR 215 R L Q+ + R V ++ + + +L+R++ +E Sbjct: 519 RALWEQIKVLNSMTIEGHYKTRSGRTFPVEVSVNYFVYGGREYVLSLVRDVTERKE---- 574 Query: 216 LDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGH 275 ++ IRS A D TGL NR ++L E+ +G +M++ L F L+DT GH Sbjct: 575 VEAQIRSLAYFDSLTGLPNRRLLLDRLNQARLSSERTREYGALMILDLDRFKTLNDTQGH 634 Query: 276 SQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLP------HRTLKEAESIAGQLI 329 + + L+ + + + R +F +L + + +AE+IA ++ Sbjct: 635 DVGDRLLIDVARRLTASVRQ--NDTVCRLGGDEFVVVLEGFGSDEDQAVTQAEAIAEKVR 692 Query: 330 KAVDTLPN--NKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYD 386 A++ + +G+ + + +++ A+ A A G N ++ Sbjct: 693 AALNQPYSLSGNGSRFHSTTSVGLTLFCGHDATADMLLKQADVALYQAKDAGRNLVRFFN 752 Query: 387 DSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFD-GNEEVSSA 445 ++ + + Q L R +Y +P V + +V E + R GNE +S Sbjct: 753 PAMQAAIDTRMAMEAALRQALERDEFHVYYQPQVDQRERVIGAEALLRWRPQGNEAISPL 812 Query: 446 EYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE------NLAIQVTVESLIRPRFQRWLR 499 E++P+ + GL + + L+ W + +A+ V+ P F ++ Sbjct: 813 EFIPLAEETGLILPIGKWVLDVACAQLKAWESDPRAAHLKIAVNVSARQFHEPDFVATVQ 872 Query: 500 DTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIK 559 D+L + R+ +EL E+ V + I + + +NALGV ++ G S S++K Sbjct: 873 DSLAR-SGVDPTRLQLELTESVVLEKIETVVSRMEELNALGVSFCLDDFGTGYSSLSYLK 931 Query: 560 ELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGV 619 L ++ +K+ VR++ + + +VQ+++ V A GV + ++ L + Sbjct: 932 RLPLDQVKIDQSFVRDVVDDSNDAAIVQAIMAMSRSLGLNVIAEGVETHAQRDFLAGK-C 990 Query: 620 TGGQGDFFASSQPLDTNVK 638 G QG F P++ + Sbjct: 991 LGYQGFLFCEPIPIEQWER 1009 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 95/448 (21%), Positives = 174/448 (38%), Gaps = 16/448 (3%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 + +I R H +LD A D TGL NRL ++L L+ + T V I Sbjct: 884 VFSDITELRRAHDQLD----HQAHHDPLTGLPNRLLLGDRLHKALQRAHRDETGLAVFFI 939 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA 321 L F ++DT GH + + L M + R +F ++ A Sbjct: 940 DLDRFKNINDTLGHQVGDRVLCEVAWRLGRLMRE--SDTVGRLGGDEFLIVIEDVGEPTA 997 Query: 322 E-SIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGG 379 IA +++ + P + IGI + G D E +M++A+ A A +G Sbjct: 998 VSHIAEKILNVLQASPVTVEHEFFVGASIGISVFPQDGADAETLMKNADVAMYRAKERGR 1057 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG 438 N++ + L + ++ T + + + RG R+Y +P + G+V E + R Sbjct: 1058 NTYEFFTKDLTQTSLARLQMETDLRRAIERGELRVYLQPQFSLATGKVVGAEALVRWLRP 1117 Query: 439 N-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLA-----IQVTVESLIRP 492 V E++ + + GL W LA + V+ R Sbjct: 1118 QQGLVLPGEFIKLAEESGLIVPIGEWVQGTAACQWATWVAAGLAPGVLSVNVSGVEFARG 1177 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 R Q+ R TL + + + +E+ E+ + H V+ + A+G+ + ++ G Sbjct: 1178 RIQQTARRTL-ELSGLPARFLELEITESAIMSHAENSVQVLDNLRAMGISLVIDDFGTGY 1236 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S +++K L + LK+ VR + TE+ + ++++ V A GV + ++ + Sbjct: 1237 SSLAYLKRLPLNKLKVDQSFVRGLPNDTEDCAIARAVIALGHSLQLTVIAEGVETEAQRE 1296 Query: 613 TLIQRGVTGGQGDFFASSQPLDTNVKKY 640 L G QG P D ++ Sbjct: 1297 FLTGEGCDEMQGYLRGRPMPFDDYHARF 1324 >UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK8_VARPS Length = 1107 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 80/466 (17%), Positives = 189/466 (40%), Gaps = 14/466 (3%) Query: 188 IYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLE 247 Y +T +L + +I + Q + + +R A+ D TGL NR ++LA ++ Sbjct: 636 PYAIDAQTQESLRVIALQIAQYK-QRKQAERSLRFMASHDGLTGLFNRAALQHELARAIK 694 Query: 248 DQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRS 307 + V+ + L F ++DT GH +E L+ + ++AR+ Sbjct: 695 RSNRHQKQFAVIFVDLDRFKHINDTLGHGVGDEMIKICGERLTALLRE--ADVVARFGGD 752 Query: 308 DFAALLPHRT-LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVME 365 +F LL + + +A +A +++ + +G+ + G D E +++ Sbjct: 753 EFVLLLENLSSANDAAGLAEKVLACCAEPFFLAGRELHVSASVGVSIYPDNGADAEALLK 812 Query: 366 HAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REG 424 +A++A A +G N++ Y + + + + + L RG ++ +P + + Sbjct: 813 NADTAMYRAKERGRNTFRFYAAKMNAQNTEQLMLESALRHALERGELEMHYQPKMDLQTQ 872 Query: 425 QVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL--- 480 ++ E + R + +++P+ + GL + + R R W + L Sbjct: 873 RIVGVEALMRWHHPILGMIPPVQFIPIAEELGLIVSLGKWALERACADSRSWQKYGLPKV 932 Query: 481 --AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNA 538 ++ ++ ++ L + + + +E+ E V + ++R + Sbjct: 933 LMSVNLSPRQFESRTLIADIQAVL-EASGLEPSLLELEITEGAVMANPEHAAKLLRAIRD 991 Query: 539 LGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTST 598 +GV +A++ G S S++K + +K+ + ++ + + + L+ ++ G Sbjct: 992 MGVGLAIDDFGTGYSSLSYLKHFPLSTVKIDRSFINDLSQDADARALIDGIITLAHGLRM 1051 Query: 599 QVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRY 644 +V A G+ + ++ L G QG + P D V+ + R+ Sbjct: 1052 KVVAEGIETTAQLDYLRSHGCDEAQGYWLCKPVPADE-VRNFMARH 1096 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 557 bits (1436), Expect = e-157, Method: Composition-based stats. Identities = 97/558 (17%), Positives = 203/558 (36%), Gaps = 25/558 (4%) Query: 99 GSSDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAV--- 155 S FR + + + N L AIG ++ L + Sbjct: 144 ESESRFRRILQEIPSIAFKGYGVDGTVRYWNLASELFYGYSAGEAIGRNLLDLVIPEGMR 203 Query: 156 -----RWLQRQLAG-QELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNA 209 R L+ G + + +G R + + P + L L +I Sbjct: 204 AEEKRRMLRMAETGRADPPSEQCLLRRDGSRITVLSCHAVVRRPGEAPELYGLDIDISER 263 Query: 210 REQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNML 269 + +L+ A D TGL NR F ++L L ++ G V+++ L F ++ Sbjct: 264 KINEEQLE----YLATHDELTGLANRALFHDRLEQSLHYAKRSGRIVAVLLLDLDRFKII 319 Query: 270 SDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL-KEAESIAGQL 328 +D+ GHS + + L + +AR +F LL T + +A ++ Sbjct: 320 NDSLGHSFGDRLLSAVAQRLDRVVR--DTDTVARLGGDEFVLLLAEVTEPDDVGLLASRI 377 Query: 329 IKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDD 387 + + + + +GI + D ++ +A+ A A +GG ++ Y Sbjct: 378 LHELAVPHRIEGREIVMSASLGISLYPKDSGDGSTLIRNADIAMYRAKQEGGGVFSFYAP 437 Query: 388 SLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNEEV-SSA 445 + ++ + + + L RG LY +P V G++ E + R V + A Sbjct: 438 EMNQRAMETMEIESALRLALERGEFTLYYQPKVDLASGRISGCEALIRWLHPRRGVVAPA 497 Query: 446 EYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRD 500 +++P+ + GL + +R W E + A+ ++ +R+ Sbjct: 498 DFIPLAEETGLIVPIGTWVLKEACRQVRAWQAEGVPIANVAVNLSARQFRTGDLPGLVRE 557 Query: 501 TLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKE 560 L + + +E+ E+ V +++ V+ + A+GVR++++ G S + + Sbjct: 558 VLGET-GLDPHLLELEMTESMVMADHAQVVAVMEELTAIGVRLSLDDFGTGYSSFAHLSH 616 Query: 561 LNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVT 620 + LK+ ++ I + + S++ + A GV + ++ L ++G Sbjct: 617 FPINHLKIDRSFIKQIVTDPNSATIATSIIAMAHRMRLKAIAEGVETEAQLAYLRKQGCD 676 Query: 621 GGQGDFFASSQPLDTNVK 638 QG + P Sbjct: 677 EIQGYLLSRPLPASEYAA 694 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 557 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 81/448 (18%), Positives = 170/448 (37%), Gaps = 16/448 (3%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 + ++ +R ++ A D TGL NR +L+ + + ++ + Sbjct: 376 VFHDVSESRAMALKMA----HLAQHDFLTGLPNRALLTERLSRAIGQARRHNKRVGMLFL 431 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKE 320 L F ++D+ GH+ ++ + L + + R +F LL ++ Sbjct: 432 DLDYFKHINDSLGHAVGDQLLQQVAERLIVCIR--DTDTVCRQGGDEFVILLAEIEQARD 489 Query: 321 AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGG 379 A IA +L+ A + + IGI + G D + VM++A++A +A G Sbjct: 490 AAPIAEKLLAAFAEPCLIAGNELHVSLSIGISIYPDDGMDADTVMKNADTAMYHAKANGR 549 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG 438 N++ + + + + + + L +G LY +P + G + E + R D Sbjct: 550 NNYQFFTTEMNTRAVRRLFIEGNLRRALRQGEFMLYYQPKIDLASGMMIGSEALIRWQDP 609 Query: 439 N-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRP 492 V +++P+ + GL + +R W E L ++ ++ Sbjct: 610 EHGLVYPKQFVPIAEESGLIVPIGSWVLREACRQVRAWQESGLVAVPVSVNISAVEFRHK 669 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 F + L + + +EL E+ + V+ + +G+++A++ G Sbjct: 670 DFLEGVALILKETGMLP-SYLELELTESILMHDAESSATVLEALKTMGMQLAIDDFGTGY 728 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S S++K + LK+ V +I ++ +V +++ +V A GV + + Sbjct: 729 SSLSYLKRFPINTLKIDQSFVHDIAIDPDDASIVGAMIGMGKNLKQRVVAEGVETEEQLA 788 Query: 613 TLIQRGVTGGQGDFFASSQPLDTNVKKY 640 L GQG F P D + Sbjct: 789 FLRTLHCDEGQGFLFGRPLPADEFARLL 816 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 557 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 75/444 (16%), Positives = 174/444 (39%), Gaps = 18/444 (4%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + + I+ A D T L NR ++L + + G ++ I L F L+D Sbjct: 586 ERKIAEERIKELAFFDALTRLPNRTLLLDRLRQAITASARNEACGALLFIDLDHFKTLND 645 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH------RTLKEAESIA 325 T GH + + + L+ ++ +AR +F +L + + E++ Sbjct: 646 TLGHDKGDLLLQQVARRLADSVLE--SDTVARVGGDEFVVVLGNLHKNRQEAANQTEAVG 703 Query: 326 GQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAI 384 +++ + + + ++ IG +R Q +++++ A+ A + +G N+ Sbjct: 704 ERILAVLGSPYHLGKIEYRTSASIGATVFRGHQASIDELLKQADLAMYKSKERGRNAVRF 763 Query: 385 YDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEEV-S 443 +D + + + L+ + V +V E + R + Sbjct: 764 FDPDMQTVVVQRAALEAGLRNAIEDNQFLLHYQAQVVGT-RVTGAEALVRWQHPQRGIVP 822 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE------NLAIQVTVESLIRPRFQRW 497 AE++P+ + GL + L W +A+ V+V+ + F Sbjct: 823 PAEFIPLAEETGLIVALGSWVLEAACAQLARWAARPDMAHLTIAVNVSVQQFRKADFVDN 882 Query: 498 LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 + + + ++ R+ +EL E+ + ++ + + + A G+ A++ G+ S S+ Sbjct: 883 VLTIIGRT-GARPDRLKLELTESVLVDNVQDIIEKMSALKAKGIVFALDDFGIGYSSLSY 941 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 +K L ++ LK+ VR++ + + ++ +++V V A GV + ++ L Sbjct: 942 LKRLPLDQLKIDRSFVRDVLVDSNDAVIARTIVALARSLGLGVIAEGVETEAQRDFLAAA 1001 Query: 618 GVTGGQGDFFASSQPLDTNVKKYS 641 G QG +F P++ + Sbjct: 1002 GCYAYQGYYFCRPLPIEDFEALLN 1025 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 557 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 89/445 (20%), Positives = 173/445 (38%), Gaps = 16/445 (3%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 + +I +E +RL + A D T L NR+ + +LA +E ++ G V+ + Sbjct: 373 VFSDISRMKETEARL----QRLAHYDALTDLPNRVLLNLRLAHGVERVQRSGEMLAVLFL 428 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKE 320 + F ++D+ GH +E + L + + LAR +F LL R+ + Sbjct: 429 DIDRFKNVNDSLGHPVGDELLIEIARRLRSRIRAE--DTLARLGGDEFVILLDRIRSAND 486 Query: 321 AESIAGQLIKAVDTLPN-NKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQG 378 A ++I ++ + IGI + D Q++ +A++A A G Sbjct: 487 VADFAQEIIDLLNQSFQLASGQEVFVGASIGISLYPLDTDDATQLISNADAALYQAKEAG 546 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFD 437 N + Y L + + + L RG L+ +P V + G+V E + R Sbjct: 547 RNVYRFYTADLTRAAHERLGLEAALRRGLERGEFVLHFQPVVALDKGEVVGAEALVRWNH 606 Query: 438 G-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN----LAIQVTVESLIRP 492 ++ ++P+ + GL + R W + +A+ ++ Sbjct: 607 PTEGMIAPLRFIPLAEETGLIVPLGEWVLESACRQGREWLDCGRPLTIAVNLSTRQFRAG 666 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 +RD L + + +E+ E+ V + R + + LGVR++++ G Sbjct: 667 DLTATVRDILDRT-GFPAALLELEITESTVMEDADRAVATLAALKGLGVRLSIDDFGTGY 725 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S +++K V+ LK+ VR+I ++++V ++V V A GV + + Sbjct: 726 SSLAYLKRFAVDALKIDRSFVRDIADDENDRMIVATVVAMAHQMRLGVIAEGVETAEQLA 785 Query: 613 TLIQRGVTGGQGDFFASSQPLDTNV 637 L G QG Q + Sbjct: 786 FLRSLGCEAYQGYLVGRPQAAADFL 810 >UniRef50_B9M6C9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M6C9_GEOSF Length = 845 Score = 557 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 86/445 (19%), Positives = 184/445 (41%), Gaps = 16/445 (3%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 ++R++ ++ +++ IR A D+ TGL NR+ F + LA + + VM Sbjct: 403 HIVRDVTESK----KMEDEIRYQATHDILTGLANRMLFMDHLALSISQGHRYNEIQAVMF 458 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LK 319 + L F ++D+ GH+ ++ ++ L + +AR ++ L+ + Sbjct: 459 LDLDRFKSINDSLGHAAGDKLLQLISGRLKECVRET--DTVARIGGDEYNILITQMAHPE 516 Query: 320 EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQG 378 +A +IA +++ +++ I IGI + G+D E ++++A+ A +A QG Sbjct: 517 DATAIANKILSSMNKPFAIDGHQLHVTISIGISLYPTDGEDAETLLKNADIALYHAKEQG 576 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFD 437 N++ Y+ +L + V+ + Q L R + +P V + GQV E + Sbjct: 577 RNNYQFYNPALNTRTLERVKMENRLRQALERHELVVLYQPQVAMDTGQVTGAEALVYWLH 636 Query: 438 GN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIR 491 +S ++PM + G + D + + W +E + + ++ + R Sbjct: 637 PELGLLSPGHFIPMAEEIGFITDIDEWVLETACAQNKAWQDEGYRSFNVTVNMSSKQFRR 696 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 P +R L + + +E+ E + I P + + + V A++ G Sbjct: 697 PDLVDQVRRVL-NATGLPPRFLELEITEGTAMKDIEYTIPSLNTLTGMEVGFAIDDFGTG 755 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S S +K+L + LK+ + + ++ +V +++ +V A GV + Sbjct: 756 YSSLSCLKKLPIRKLKIDKSFIFGVNTDPNDKAIVATIIAMAHNLKLEVIAEGVEDADQL 815 Query: 612 QTLIQRGVTGGQGDFFASSQPLDTN 636 + L Q QG ++ P + Sbjct: 816 EFLHQNHCDQMQGFLYSRPIPAEDF 840 >UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6X8_9PROT Length = 713 Score = 557 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 110/630 (17%), Positives = 232/630 (36%), Gaps = 44/630 (6%) Query: 32 NAIQYKFSHRVQAVATAIDTHLVSNDFSVLRPQITELMMSADIVRVDLLHGDKQVYTLAR 91 + V + VL L+ ++ H +++Y Sbjct: 109 RHGDDRGQRFVGVTFNIDERKRKEEQLIVLEQDTRTLIENSPDTVARYDHECRRIYVNPA 168 Query: 92 NGSYRPVGSSDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVML 151 S P G+ + + + P + Sbjct: 169 LASSFPGGAEKILGKKPSEIPGGPEFD-----------------KFEAKIVEVFATGNNA 211 Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 ++W G++ E L ER S+ T R + L ++ A Sbjct: 212 LFELKW-----QGKDGKELCNHIRLTAERDSSGRLTSVLAIGRDITELYESRAALKRANA 266 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 Q ++ L++S A D TGL NR F ++L L + G G ++ I L +F L+D Sbjct: 267 QLENMNDLLQSQATSDPLTGLPNRRFMLDRLKHALASSSRSGREGALLFIDLDNFKTLND 326 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIA------ 325 T GH ++ + + L T + G +AR +F +L + K+ E+ A Sbjct: 327 TLGHDVGDQLLQQVAHRLETCVRE--GDTVARLGGDEFVVMLEDLSEKDLEAAAQTEAVG 384 Query: 326 GQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAI 384 +++ A++ + + IG + Q +++++ A+ A A G N+ Sbjct: 385 EKILAALNQPYQLGKHEYRNTPSIGATLFNDHQQSLDELLKQADIAMYQAKRAGRNALRF 444 Query: 385 YDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-----EGQVHHRELMCRIFDGN 439 +D + E + + L L+ + V + E + R Sbjct: 445 FDPQMQETINSRATLENELRKALELHQFYLFYQVQVDSVQEDGSHRATGAEALIRWAHPE 504 Query: 440 -EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL------AIQVTVESLIRP 492 VS A+++P+ + GL + L+ W + L A+ V+ + +P Sbjct: 505 RGLVSPAQFIPLAEETGLIVPIGLWVLDTACAQLKTWQHDALTRGLVLAVNVSAKQFRQP 564 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 F + D +Q K + +EL E+ + ++I + + +G+R +++ G Sbjct: 565 DFVAQV-DAAVQRHGIDPKLLKLELTESLLLENIQDTIATMNALREIGIRFSLDDFGTGY 623 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S ++K+L ++ LK+ + ++ + ++ +V++++ + V A GV + ++ Q Sbjct: 624 SSLQYLKQLPLDQLKIDQSFICDLVSDSSDRAIVRTIIAMAQSLNLNVIAEGVETEAQRQ 683 Query: 613 TLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 L+++G QG F+ P++ + + Sbjct: 684 ILLEKGCIHHQGYLFSKPVPINQFEAQLRR 713 >UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TX60_9PROT Length = 961 Score = 556 bits (1434), Expect = e-157, Method: Composition-based stats. Identities = 100/487 (20%), Positives = 200/487 (41%), Gaps = 17/487 (3%) Query: 154 AVRWLQRQLAGQ-ELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQ 212 A WL+ AGQ + + A R+ V + + + L ++R+I + Sbjct: 468 AQVWLRAAAAGQPQQFDWHARRLDGSLFWVEVSMRLARFSDGQNRLL-VVVRDITERKNA 526 Query: 213 HSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDT 272 RL+ A D T L NRL +++ + E+ G +M + L F ++D+ Sbjct: 527 QDRLE----FMAHHDPLTELPNRLLLQDRVDRAIALAEREGRRVALMFLDLDQFKTVNDS 582 Query: 273 WGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKA 331 GH+ + + L + +AR +F +L R +A ++ K+ Sbjct: 583 LGHAAGDRLLKDVAWRLRQCVRE--SDTIARLGGDEFVIVLNAVRDADGVVEVAEKIHKS 640 Query: 332 VDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLP 390 V + + + +GI + G D + +M+ A++A +A G +++ + + Sbjct: 641 VAPPITIEGQEVTSTLSMGIAMFPEDGHDFDTLMKKADAAMYHAKESGRSTYRFFAARMN 700 Query: 391 EKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREG-QVHHRELMCRIFDGN-EEVSSAEYM 448 ++ R+ + + L RG +LY +P V+ G V E + R VS AE++ Sbjct: 701 ADAVAHLALRSGLHRALERGEFQLYFQPQVSLTGGAVVGAEALIRWNHPERGLVSPAEFI 760 Query: 449 PMVLQFGLSEEYDRLQISRLIPLLRYWPEEN----LAIQVTVESLIRPRFQRWLRDTLMQ 504 P+ GL + + W +A+ ++ R +R +R+ L + Sbjct: 761 PVAEDSGLIVPMGDWVLRQACRQAALWQAGGHALTMAVNLSALQFRRGDLERAVREALEE 820 Query: 505 CEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVE 564 + + +EL E+ + Q + + R + ALGV+++++ G S +++K V+ Sbjct: 821 SGLAPHS-LELELTESIMIQDHEAVMDMTRRLGALGVQLSIDDFGTGYSSMAYLKRFAVD 879 Query: 565 LLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 LK+ VR++ T+N + Q++++ +V A GV + L G QG Sbjct: 880 KLKIDQSFVRDVHTDTDNAAITQAIIQMAHSLKLEVIAEGVEVTEVVEFLRDHGCDLAQG 939 Query: 625 DFFASSQ 631 + Sbjct: 940 FLYGRPM 946 >UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SC6_GEOMG Length = 821 Score = 556 bits (1434), Expect = e-157, Method: Composition-based stats. Identities = 88/466 (18%), Positives = 176/466 (37%), Gaps = 16/466 (3%) Query: 188 IYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLE 247 + +P T ++ R + IR A D TGL NR ++L+ + Sbjct: 350 LSAFPVFNEQGKATKFIKVVEDITDRKRAEEKIRRLAYYDSLTGLPNRPLMMDRLSQAIR 409 Query: 248 DQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRS 307 + G ++ + L F ++D+ GH + + LS LAR Sbjct: 410 HARRHGEVVALLFLDLDRFKDVNDSQGHRVGDRLLQEVAARLSGCTRE--SDTLARLGGD 467 Query: 308 DFAALLPH-RTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVME 365 +F + P R +A +A +++ A+ IGI + G + E +++ Sbjct: 468 EFVIIAPGVRAATDASLLADKILAALAEPFTLDRQTLHIATSIGIVLFPSDGGNGEMLLQ 527 Query: 366 HAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREG- 424 A+ A A +GGNS+ + + + + Q L+ G L +P V G Sbjct: 528 RADMAMYAAKDRGGNSYRFFSAEMNTRAVERHELEEDMRQALTNGEFFLMYQPQVN-TGT 586 Query: 425 -QVHHRELMCRIFDGNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-- 480 +V E + R + + + ++P+ + G + R + W + L Sbjct: 587 WKVVGVEALVRWNHPRKGVILPSRFIPVAEETGFISKLGRWVLEEACRQGAQWQHDGLPP 646 Query: 481 ---AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVN 537 + + + D L Q + + IEL E + + + Sbjct: 647 LQMGVNLCARQFTHEEIVGTVSDVL-QKTGLPSELLEIELTETMLM-DSETAVSTLGQLK 704 Query: 538 ALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTS 597 ALGVR+A++ G S +++K ++ +K+ +R+I + N +++++V Sbjct: 705 ALGVRLAIDDFGTGYSSFNYLKHFPLDRIKIDQSFIRDIGQSRGNGAIIEAIVAVARSLG 764 Query: 598 TQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 +V A GV + + + L+ QG +F+ L +V + + Sbjct: 765 PEVLAEGVETEEQLRYLMSITCADIQGFYFSRPL-LPDDVSRLIRE 809 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 84/454 (18%), Positives = 175/454 (38%), Gaps = 26/454 (5%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 Q ++ + A D T L NR ++L +L + G +M I L +F L+D Sbjct: 465 QRKAVEDQLHKLAFYDPLTQLPNRRLLLDRLGHVLAGSTRSRNQGAIMFIDLDNFKALND 524 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK-----EAESIAG 326 T GH + + L + + + +AR +F ++ + E++AG Sbjct: 525 TQGHDVGDRLLAEVAQRLKSSVRQC--DTVARLGGDEFVVMVQDLAADSMVVAQVEAVAG 582 Query: 327 QLIKAVDTLPNNKM---------LDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGL 376 +++ A+D L+ IGI + + +++++ A+ A A Sbjct: 583 KILAALDCPYRLVFDAELGRRNALNYHCTASIGITLFGAHSTNVDELLKQADLAMYQAKD 642 Query: 377 QGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCRI 435 G N+ +D + V + + + G +LY +P V ++ E + R Sbjct: 643 SGRNAIRFFDPEMQAAITSRVALEADLREAVEAGQFQLYYQPQVVGESHRLTGAEALLRW 702 Query: 436 FDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE------NLAIQVTVES 488 V +E++P+ + GL + + L W + +A+ V+ Sbjct: 703 HHSRRGMVPPSEFIPLAEETGLILPLGQWVLETACAQLATWASQPEMAQLTVAVNVSAHQ 762 Query: 489 LIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQA 548 + + F + L + +R+ +EL E+ + ++ + + L+ + GV +++ Sbjct: 763 IRQTDFVDQVLAVLADA-GANPQRLKLELTESLLVSNVEDIIAKMTLLKSRGVGFSLDDF 821 Query: 549 GLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSR 608 G S S++K L ++ LK+ V + + + + +V V A GV + Sbjct: 822 GTGYSSLSYLKRLPLDQLKIDQSFVNEVLTDANDAAIAKMIVALAESLGLAVIAEGVETE 881 Query: 609 SEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 + L + G QG F+ PL + + Sbjct: 882 EQRNFLAESGCHAYQGYLFSKPLPLAGFEQWIGK 915 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 83/441 (18%), Positives = 180/441 (40%), Gaps = 17/441 (3%) Query: 205 EIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLP 264 +I + R + + I+ A D TGL NR + + L ++ V+++ L Sbjct: 613 DITDKR----KTELQIKKLAYFDSLTGLPNRTLLKDHMELALGQARRLNKFVAVLLLDLD 668 Query: 265 DFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAES 323 +F ++DT GH+ + ++ L T LAR+ +F LL ++ S Sbjct: 669 NFKHINDTLGHATGDLLIRSVAERLRTECR--TCDTLARWGGDEFVLLLTDLDDIQNTTS 726 Query: 324 IAGQLIKAV-DTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNS 381 + + + + D + IGI + GQD E +++ A++A A G N Sbjct: 727 ATEKFMALLTERPFATSECDINTTASIGIALYPQDGQDPETLLKRADTAMYEAKKNGRNG 786 Query: 382 WAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREG-QVHHRELMCRIFDGNE 440 + + L E+ R + L G +L +P + ++ E + R E Sbjct: 787 YHFFSLQLAEQAERRHRMEINLRSALKEGEMQLVYQPQIDLGKVRITGMEALLRWQSPEE 846 Query: 441 E-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPE-----ENLAIQVTVESLIRPRF 494 +S A ++P+ + GL + + W + +A+ ++ + +P Sbjct: 847 GTISPARFIPLAEETGLIYPLGEWVLQQACRQGAIWQKTEASPLCVAVNLSAKQFHQPDL 906 Query: 495 QRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVS 554 + ++ L + + +E+ E+ +++ + + LGV+ +++ G S Sbjct: 907 AKNIKKILRET-GLSPHLLELEITESVFLENMEAAIEALTELKKLGVQFSIDDFGTGYSS 965 Query: 555 TSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTL 614 S++K+L ++ +K+ VR+I+ ++ ++++ + ++ A GV + + L Sbjct: 966 LSYLKKLPIDRIKIAQEFVRDIDTDDGDKAIIKATIAMAKSLGMKLIAEGVENHQQLAFL 1025 Query: 615 IQRGVTGGQGDFFASSQPLDT 635 + G QG +FA P Sbjct: 1026 LLHGCHAMQGYYFAKPMPAQE 1046 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 555 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 90/472 (19%), Positives = 187/472 (39%), Gaps = 15/472 (3%) Query: 175 ILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNN 234 + NG + T P L R+I +++ + I+ A D TGL N Sbjct: 387 LDNGMHWFEMSVTRKSALPGEEPLFLVLCRDITESKQAERK----IQLLAHFDSLTGLPN 442 Query: 235 RLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMM 294 R+ ++ L ++ GT ++++ L F ++D+ GH +E L L + Sbjct: 443 RVLLTDRCNLALSAAQRNGTPLALLLLDLDHFKNVNDSLGHRVGDEVLIALAGRLKGAVR 502 Query: 295 RYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAW 354 + R +F +LP A IA L+++ + + IGI + Sbjct: 503 EQ--DTVCRLGGDEFILVLPETNAAGAAHIAEMLLQSALVAFELEPHELTVTPSIGIALF 560 Query: 355 R-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPR 413 G D + + A++A A G N++ + + + + + + L R + Sbjct: 561 PGDGSDFDTLSRCADAAMYRAKKDGRNNYRFFTAEMQARSERTLTLENALRRALERNQLQ 620 Query: 414 LYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPL 471 L+ +P ++ G+V E + R V AE++P+ GL + + Sbjct: 621 LHYQPQISLASGRVVGAEALLRWSHPELGAVPPAEFIPVAETCGLILPIGEWVLRTSVQQ 680 Query: 472 LRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHI 526 L+ W + L++ ++ + L + + + +EL E Sbjct: 681 LKAWIDAGMLPIALSVNLSSVQFRHADLPELVTSILNEAQ-LPAHLLELELTENVAMTDP 739 Query: 527 SRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLV 586 V+ ++ GVR++++ G S S++K+ V +K+ VR+I + ++++ +V Sbjct: 740 LGAIAVMNNLHERGVRMSIDDFGTGYSSLSYLKKFRVYKIKIDQSFVRDITEDSDDKAIV 799 Query: 587 QSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVK 638 +++ + Q A GV + + + L +G T QG +F+ P++ Sbjct: 800 GAIISMATSLGMQTIAEGVETEGQLEFLKAKGCTEVQGYYFSRPLPVEQFEA 851 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 555 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 92/452 (20%), Positives = 175/452 (38%), Gaps = 16/452 (3%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 +R++ E IR + D TGL N F + L + + ++ G VM I Sbjct: 593 FVRDLSRRDEAQ----EHIRRLSHFDTLTGLPNSSLFADLLRQAIGNAQRSGESLSVMYI 648 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA 321 + F ++DT GH + + + LAR +F LLPH ++ A Sbjct: 649 DIDHFQHINDTLGHRIGDRLLVEIAGRFRNAL--CAENTLARLGGDEFLILLPHAQVECA 706 Query: 322 ESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGN 380 +A +LI A + + IGI + G+D E +++ A++AT A G N Sbjct: 707 AHVAEKLIVAAADPMLIEDHEMLVTPSIGIAMYPADGEDFETLLQRADTATNRAKSDGRN 766 Query: 381 SWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE--GQVHHRELMCRIFDG 438 ++ + + + +R T + + L R L+ +P + G+V E + R Sbjct: 767 TYRFFAPEMQLRSAHTLRLETALRRALERNELVLHYQPQIDLVDFGRVAGVEALIRWQHP 826 Query: 439 N-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRP 492 VS AE++P+ GL + + L+ W L + ++ + Sbjct: 827 EFGLVSPAEFIPIAESTGLILPIGEWVMQTALLQLKAWQLAGLQLGQVGVNLSAHQFRQQ 886 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 + L + + +EL E+ + ++ ++ GVR++++ G Sbjct: 887 NLPATVARILAEA-GLPASCLELELTESAMMDDPVAAVAMMDALHRDGVRMSIDDFGTGY 945 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S +++K ++ LK+ VR++ + E + +V+++V + A GV + Sbjct: 946 SSLNYLKRFRIDKLKIDQSFVRDLTQDPEGEAIVEAIVSLARTLRFRTIAEGVEKPEQLA 1005 Query: 613 TLIQRGVTGGQGDFFASSQPLDTNVKKYSQRY 644 L G QG F+ P D Sbjct: 1006 FLRASGCQEVQGYLFSRPLPPDELAVWLRAWR 1037 >UniRef50_Q1H2A5 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2A5_METFK Length = 722 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 106/447 (23%), Positives = 187/447 (41%), Gaps = 17/447 (3%) Query: 206 IQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPD 265 I+ Q L+ ++ A D TGL NR +L + E + HG VM + L + Sbjct: 273 IRADITQRKILEQSVQRMALYDDLTGLPNRRLMVERLQMIREACVRSHRHGAVMFLDLDN 332 Query: 266 FNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK------ 319 F ++DT GH Q + + L + + +AR +F LL Sbjct: 333 FKEINDTHGHEQGDRLLKQVGQRLRENIRQV--DTVARAGGDEFIILLADLDEDPAKATA 390 Query: 320 EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDT-EQVMEHAESATRNAGLQG 378 +A ++A +L A+ T + +GI + ++ +HA+ A A QG Sbjct: 391 QAYNVAEKLRNALSTPYIFNRIVLHTSTSVGIVMFSDKAKPKTELFKHADMALYRAKAQG 450 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG 438 N +++D SL + + Q L R RLY +P V R+G+V E + R Sbjct: 451 KNRISMFDPSLQAEVLEYASLLADLRQALQRDEFRLYFQPVVNRDGKVIGHEALIRWIHP 510 Query: 439 -NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE------NLAIQVTVESLIR 491 V +++P+ Q GL +E + +S L W E+ L++ V+ + Sbjct: 511 VRGMVLPGQFIPVAEQTGLIQEIGQWVLSMACKQLNVWSEDAVKSQWTLSVNVSAKQFRD 570 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 F + D + Q + KR+ +EL E+ I + +R + +GV +++ G Sbjct: 571 MDFVGKVHDAIRQ-SGADPKRLWLELTESMFHTDIVQTIEKMRALQDIGVHFSMDDFGTG 629 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S S +K L ++ LK+ VR++ + +V++++ + V A G+ S ++ Sbjct: 630 YSSLSVLKLLPLDQLKIDRSFVRDVIDDPNDAAIVRTILALAGILNLTVVAEGIESSEQF 689 Query: 612 QTLIQRGVTGGQGDFFASSQPLDTNVK 638 L Q G QG FF P+D + Sbjct: 690 DFLEQHGCQAFQGYFFGKPVPMDEETQ 716 >UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFK1_HAHCH Length = 1092 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 79/452 (17%), Positives = 185/452 (40%), Gaps = 15/452 (3%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 +L ++ + + ++L+ + D TGL NR ++++ + + + + Sbjct: 493 AILNDVTESIQYQAQLEYKTK----YDNLTGLPNRNLLNDRIQQAIAYAARRNKGFALAV 548 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE 320 L +F ++D+ GH ++ + L + + G LAR +F L+ Sbjct: 549 FDLDNFKYINDSMGHETGDQLLTEVAESLRSCLRE--GDTLARLGGDEFVILMHKEECDR 606 Query: 321 AESI-AGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQG 378 + ++ + V K + IG+C + G+D ++++A++A A +G Sbjct: 607 PLGLMLNRIQQLVSQPRRLKDKEILVTPSIGVCQFPEDGEDASTLLKNADTAMYKAKERG 666 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQ-VHHRELMCRIFD 437 N Y + E + V+ + + + G LY +P + G E + R Sbjct: 667 RNRICSYTQEMNESIQKRVQMEQDLRRGIENGELELYYQPQLDPHGGGAVGLEALVRWRK 726 Query: 438 GNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRP 492 G+ V E++P+ + GL E D + L+ W ++ +++ ++ Sbjct: 727 GDRMVPPLEFIPIAEETGLITEVDAWVLRAACLQLKMWRDQKQQMVPVSVNLSPRQFQDA 786 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 +R L + + + IE+ E+ V + + + A+GV+++++ G Sbjct: 787 YCVELVRKVLQESN-IEPGCLKIEVTESMVMHNAEEALRTMTQLKAMGVQLSMDDFGTGY 845 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S S++K + LK+ VRN+ + ++++++ ++ A GV + ++ Sbjct: 846 SSLSYLKMFPFDQLKIDKSFVRNVTNDPQEAAIIRAIIGLGKTLGIKIVAEGVETVEQYS 905 Query: 613 TLIQRGVTGGQGDFFASSQPLDTNVKKYSQRY 644 L++ G QG F++ P+ + + + Sbjct: 906 FLVRAGCDLIQGYFYSPPLPVAACMHFLQEDH 937 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 96/453 (21%), Positives = 179/453 (39%), Gaps = 17/453 (3%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 L +I + Q R I+ A D T L NRL +L L+ + G H V+ Sbjct: 786 ALFTDISAQKSQEQR----IQHIAHHDALTNLPNRLLCMERLILALQQAHRNGRHVAVIF 841 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLK 319 I L F ++D+ GH + T N LS + G ++R +F +L Sbjct: 842 IDLDHFKNINDSLGHHVGDCVLVTAANRLSMGVR--DGDTVSRLGGDEFVIILADIEDSH 899 Query: 320 EAESIAG-QLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQ 377 + E I +L+ + + + IGI + G D + ++ +A++A A Sbjct: 900 QIEEIMKHRLLPLMRQPYDAGGYELHCSCSIGISIFPEDGLDKDTLLRNADTAMYRAKEV 959 Query: 378 GGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIF 436 G N++ Y + L + + T + + + R L+ +P + G+ + E + R Sbjct: 960 GRNNYHFYTEELNSRAMQRLSIETSLRKGIERNELLLHYQPKLDLHTGKPYGLEALLRWQ 1019 Query: 437 DGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLI 490 + +S E++P+ + GL + I L W L++ V+ Sbjct: 1020 HPDHGMISPMEFIPIAEETGLIIPIGKQVIRNACRQLSRWSSVGMSHICLSLNVSAVQFR 1079 Query: 491 RPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGL 550 RF L L++ E RI +EL E + + R V+ + G +++ G Sbjct: 1080 DRRFVEDLVQ-LVREEGVSPHRIELELTETMLMEDAVRTIRVMETLKDEGFLFSIDDFGT 1138 Query: 551 TLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSE 610 S +++ ++ LK+ +R + +R + ++++++ QV A GV E Sbjct: 1139 GYSSLNYLHRFPIDCLKIDRSFIRGMLERPADLAIIKAIIGLGHTLDMQVIAEGVEKEDE 1198 Query: 611 WQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 ++ L G G QG F A + + R Sbjct: 1199 YRALRAAGCDGIQGYFVARPLTPEQVPEWLLAR 1231 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 89/451 (19%), Positives = 180/451 (39%), Gaps = 17/451 (3%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 + +I ++ RLD A D T L NRL ++L L+ ++ G VM + Sbjct: 507 VFTDISKLKQTEDRLD----YLAHHDPLTDLPNRLLVLSRLEHALDGAQRRGCRVAVMFL 562 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL-KE 320 L F ++D+ GH+ +E + L + L R +F LL H + Sbjct: 563 DLDRFKTVNDSLGHAAGDELLRAVAARLRGALREE--DTLGRLGGDEFMVLLEHVEAPAD 620 Query: 321 AESIAGQLIKAVDTLPN-NKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQG 378 A +A L++ + + + IGI + G D ++ +A++A A QG Sbjct: 621 AAVVAKNLVEVLAAPFALSNGHEVFIRASIGISFYPDDGDDFMTLVRNADAAMYRAKAQG 680 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFD 437 N++ Y + L + T + + L +Y +P + ++G++ E + R Sbjct: 681 RNTYGFYTEDLIRSATERLALETRLRRALEHDEFVVYYQPVLGVKDGRLLGAEALVRWKP 740 Query: 438 GNE-EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIR 491 E VS A ++P+ + GL + +R W + +A+ ++ E R Sbjct: 741 QGEPMVSPAAFIPVAEETGLIVALGEWVLRDACRQVREWIDAGYAFGQVAVNLSAEQFRR 800 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 L L + ++ +E+ E+ + + ++ + GV +A++ G Sbjct: 801 QDVSAMLATVLAET-GLPATQLELEITESSLLEAGEHAVGLLERLKQQGVGLAIDDFGTG 859 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S +++K +++ LK+ V++I + + + ++V V A GV ++ Sbjct: 860 YSSLAYLKRFSIDKLKIDRSFVQDIADDSNDLAIASAIVAMARALDMAVQAEGVEGEAQL 919 Query: 612 QTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 + L G QG + P D ++ + Sbjct: 920 ELLRGLGCGSYQGYLCSPPLPADEFEARFLR 950 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 94/476 (19%), Positives = 183/476 (38%), Gaps = 13/476 (2%) Query: 169 ETRATRILNGERGSNVLGTIYEWPPRTSSA-LDTLLREIQNAREQHSRLDTLIRSYAAQD 227 E R + + G P R S + + +++ E + I A D Sbjct: 544 EWRGELLNRRKNGEVYWSITSISPLRNDSGEITHFIANVEDINE-RKNAEATIEHLAYFD 602 Query: 228 VKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTN 287 T L NR ++L L + G++ +M + L F ++D+ GH + + Sbjct: 603 PLTDLPNRRMLQDRLELALRRSRRHGSNVALMYLDLDSFKHVNDSMGHPAGDLLLKEMAG 662 Query: 288 LLSTFMMRYPGALLARYHRSDFAALLPHRTLK-EAESIAGQLIKAVDTLPNNKMLDRDDM 346 S + ++ R +FA +L + IA +LI+AV + Sbjct: 663 RFSGVVR--DDDVVCRLGGDEFALILHDIHQDQDVVPIAQKLIEAVAQPVPLDGREVVVT 720 Query: 347 IHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQ 405 IGI + G D + + +HA+ A +A +G N++ Y + L + + Sbjct: 721 ASIGIALFPRDGGDVKNLEKHADIALYHAKEEGKNTFRFYLEELNSTISTRIALEQGLRY 780 Query: 406 MLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRL 463 R L+ +P V G+V E + R + VS ++P+ Q L Sbjct: 781 AKERQELELHYQPKVCVASGKVSGVEALLRWHSPDFGLVSPIRFIPLAEQTRLIIPIGEW 840 Query: 464 QISRLIPLLRYWPEENL----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAE 519 + W E+ L A+ ++ L P + + + Q + + +EL E Sbjct: 841 VLRTACLQQVQWREQGLLLNMAVNLSAIQLKSPGLVERVAAIIDET-GIQPEHLELELTE 899 Query: 520 ADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKR 579 + + + + ++ + LG ++++ G S S++K V +LK+ VR++ Sbjct: 900 SALVNNPDEVVQLLERLRTLGCSISIDDFGTGYSSLSYLKSFPVTILKIDRSFVRDLAHN 959 Query: 580 TENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDT 635 + ++ + +S+V+ + + A GV S + L Q G T QG ++ D Sbjct: 960 SGDRAIARSVVDLANNLDMKTVAEGVESEEQLTILQQIGCTYIQGFIYSRPVQADQ 1015 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 90/461 (19%), Positives = 176/461 (38%), Gaps = 24/461 (5%) Query: 197 SALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHG 256 A+ + +I Q + I A D TGL NR ++L L + G Sbjct: 596 QAIFAINTDIT----QRKSAENEILHLALYDSLTGLPNRRLLLDRLGHALAVSARNQRMG 651 Query: 257 IVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL--- 313 ++ I L +F +L+DT GH + + LS+ + +AR +F +L Sbjct: 652 ALLFIDLDNFKLLNDTLGHDMGDLLLRQVAPRLSSCVRE--SDTVARLGGDEFVVILMGD 709 Query: 314 ----PHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAE 368 L + +I ++ A N IGI + Q T ++++ A+ Sbjct: 710 FGEDHDEALTQISTICERIRSAFIQPFNLDPYIHHITPSIGIALFNDQSQTTNELLKRAD 769 Query: 369 SATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHH 428 A A G N+ +D + + + + R L+ + V G + Sbjct: 770 LAMYQAKASGRNAMRFFDPDMQAAMNARAILESELYKSWERNEFILHYQLQVDSRG-IIG 828 Query: 429 RELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP------EENLA 481 E + R + +E++P + GL + L W + NL+ Sbjct: 829 AEALVRWQHPRRGLLPPSEFIPQAEETGLILPLGEWVLETACNQLASWALQPETVQLNLS 888 Query: 482 IQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGV 541 + V+ +P F + L + + +R+ +EL E+ + + + + A GV Sbjct: 889 VNVSSLQFCQPDFVEQVISILDRT-GANPQRLKLELTESILVHDMDDTIAKMMTLKARGV 947 Query: 542 RVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVY 601 A++ G+ S ++K L ++ +K+ VR++ + +V++++ V Sbjct: 948 GFALDDFGIGYSSLYYLKRLPLDWVKIDRSFVRDVLTDNNDATIVRTILLLAKSMGLAVI 1007 Query: 602 ATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 A GV + ++ L G T QG F+ PL+ +++ Q Sbjct: 1008 AEGVETGAQKDFLASHGCTAYQGYLFSRPLPLEQF-ERFVQ 1047 >UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G31_THICR Length = 891 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 85/478 (17%), Positives = 187/478 (39%), Gaps = 18/478 (3%) Query: 169 ETRATRILNGERGSNVLGTIYEWPPRTSSALDTLL---REIQNAREQHSRLDTL---IRS 222 E ++ + S S L++++ EI N + +L + Sbjct: 400 EKTVHHFIDQNQTSRYFEFTVTPLVDGSGQLNSVIQLGHEITNYLDIQEQLQQQKNDLDF 459 Query: 223 YAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQF 282 A D T L NR+ F ++L + ++ ++ I L F ++D++GH+ + Sbjct: 460 IAYHDPLTDLPNRILFLDRLTQAIHQAQRNHDKVALLFIDLDRFKEINDSFGHASGDLVL 519 Query: 283 FTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAE-SIAGQLIKAVDTLPNNKML 341 L + +AR +F L+ ++ ++IK + Sbjct: 520 IECGKRLKKAIREI--DTVARLGGDEFTILIDELKTNNVIINVVKKIIKTLSDPIFVNEN 577 Query: 342 DRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWR 400 IGI + G D Q++++A++A A G N++ Y + E+ + Sbjct: 578 IFHITASIGISIFPNDGTDANQLLQNADAAMYQAKEDGKNTYHFYTKEMTEQAYNRLLME 637 Query: 401 TLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFDGNEEV-SSAEYMPMVLQFGLSE 458 + L LY +P V ++ E + R + + ++P+ + GL Sbjct: 638 NNLRDALDNQQFELYYQPQVDITTNKIVGFEALVRWNHEQKGIIPPDHFIPLAEETGLII 697 Query: 459 EYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRI 513 + I+ + W + NL AI V+ + L RF L +T + Q I Sbjct: 698 PLGKQIIAMASQTISEWHQANLTNARIAINVSAKQLRDSRFFHNL-NTALNKNNCQPDWI 756 Query: 514 IIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLV 573 IE+ E+ V Q+ ++ + G+ ++++ G S +++K+L + +K+ V Sbjct: 757 EIEITESSVMQNPELAIKLLSKLRRKGITISIDDFGTGYSSLAYLKKLPITKVKIDRSFV 816 Query: 574 RNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQ 631 N+ + ++ + ++++ + + A G+ ++ + ++Q G QG +++ Sbjct: 817 SNLPQDKDDAEITKAIISMSQSLNLDIIAEGIETQEQQNFVLQEGCKLIQGYYYSRPL 874 >UniRef50_B8GQW3 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GQW3_THISH Length = 926 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 97/501 (19%), Positives = 192/501 (38%), Gaps = 18/501 (3%) Query: 159 QRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDT 218 + L G + R+L + + + + E R + Sbjct: 426 NQLLHGNKSQLRDELRLLTRAGEPRWVSVFVRSSQDAEGRVIATFGTLTDITE-RKRAEE 484 Query: 219 LIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQV 278 IR A D T L NR ++L + + HG ++ + L +F ++DT GH Sbjct: 485 EIRRLAFYDSLTELPNRSLLYDRLRLAMASAARSRHHGAILFLDLDNFKDINDTLGHDVG 544 Query: 279 EEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK------EAESIAGQLIKAV 332 +E + + + + LAR +F +L + EAE++ +L+ + Sbjct: 545 DELLRQVASRMQGTIRET--DTLARLGGDEFVIILNDLHPEQAQAAVEAETLGSKLLHLL 602 Query: 333 DTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYDDSLPE 391 +R IG + G+ + +++++ A+ A A G N+ ++ + + Sbjct: 603 AEPFRLGEHERHCTPSIGATLFGDGEVNVDELLKQADLAMYRAKDSGRNTLCFFEPEMHQ 662 Query: 392 KGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPM 450 + + L L+ +P V +G + E + R V E++ + Sbjct: 663 VVKARAALEADFRKALREDQLHLHYQPHVDDQGHILGAEALLRWSHPERGMVPPMEFIAV 722 Query: 451 VLQFGLSEEYDRLQISRLIPLLRYWPEE------NLAIQVTVESLIRPRFQRWLRDTLMQ 504 Q GL + R + L W E N+A+ V+ + P F R + + L Q Sbjct: 723 AEQTGLIIKLGRWVLQTACQQLALWHRESQWMRINMAVNVSAKQFRHPDFVREVAEIL-Q 781 Query: 505 CEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVE 564 + + +++EL E+ + + + + + LGV A++ G S S++K L + Sbjct: 782 STGAPAQHLVLELTESLLLEDTETVITRMNALRELGVGFALDDFGTGYSSLSYLKRLPLS 841 Query: 565 LLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 LLK+ VR+I + + + ++ +V A GV + + L++ G QG Sbjct: 842 LLKIDQSFVRDILVDANDAAIAEMIITLAKTLGLEVIAEGVETPEQRDFLLEMGCHQFQG 901 Query: 625 DFFASSQPLDTNVKKYSQRYS 645 F P+D K+ R + Sbjct: 902 YLFGRPGPVDQLEKRLVGRRT 922 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 554 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 85/449 (18%), Positives = 172/449 (38%), Gaps = 16/449 (3%) Query: 203 LREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIR 262 +I + R I A D T L NRL ++L + ++ T VM I Sbjct: 786 FTDISERKVNEER----IHFLAHHDSLTLLPNRLSLQSRLEKVFQEAFISQTQIAVMFID 841 Query: 263 LPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAE 322 + F ++DT GH + + L M ++AR +F +L Sbjct: 842 MDHFKNINDTLGHHVGDMLLLEVARRLKNIMGN--DDIVARLGGDEFVVVLSDTDHDRVA 899 Query: 323 SIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNS 381 +A L ++ IGI + G E +M++A+ A A G N+ Sbjct: 900 KVAEALRSGLNQTYLIDNKPLHSSPSIGISLFPTDGDSVEALMKNADMAMYRAKAAGRNN 959 Query: 382 WAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN- 439 + + ++ + T + Q ++ LY +P V GQV E + R Sbjct: 960 YQFFTAAMNTLVTERQQIETGLRQAIACNELLLYYQPQVDISSGQVVGVEALIRWQHPEL 1019 Query: 440 EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRF 494 V+ ++P+ + + + + + L W ++ +A+ ++ L + Sbjct: 1020 GLVAPDRFIPIAEEIDMIIPIGQWVLENALAQLAEWRDKGAKGLRMAVNLSAHQLRKDTI 1079 Query: 495 QRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVS 554 + + L + K + + +E+ E+ Q+ + ++ + G+ +A++ G S Sbjct: 1080 VADIINVLTK-HKLGKGALELEITESVAMQYPEQNAKLLAELRQHGIELAIDDFGTGYSS 1138 Query: 555 TSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTL 614 S++K L ++ LKL V++IE + + + + V A GV + ++ L Sbjct: 1139 LSYLKLLPLDRLKLDRSFVKDIESDPNDAAISAATISMAHELGLTVVAEGVENEAQLVLL 1198 Query: 615 IQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 G QG +F+ D + ++ +R Sbjct: 1199 SGMGCDLVQGYYFSKPLAAD-DCFRFIER 1226 >UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGZ6_9PROT Length = 595 Score = 554 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 82/458 (17%), Positives = 196/458 (42%), Gaps = 22/458 (4%) Query: 204 REIQNAREQHSRLD----------TLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVG 253 R+I N ++ L+ + A D T L NR+ F ++L + ++ Sbjct: 136 RDITNLKKTQLDLEKNLKILDEQREQLEYQANHDSLTDLPNRVLFMDRLQQSINIAQRYD 195 Query: 254 THGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL 313 ++ I L F ++D+ GH ++ ++ + M + L+R +F +L Sbjct: 196 NKVALLFIDLDHFKEINDSLGHGVGDKVLIEVSRRMKNQMRK--SDTLSRLGGDEFCIIL 253 Query: 314 PHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESAT 371 +++ I ++A+ + IG+ + G ++++A++A Sbjct: 254 NDIIDIEDMSDIITSGMEALKEPMEINGHTLYVGMSIGVSVYPNDGNSASSLLKNADAAM 313 Query: 372 RNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRE 430 A G N++ YD+++ E+ V T + + L +Y +P + RE ++ E Sbjct: 314 YKAKGDGRNTYCFYDEAMTERAFERVFLETALRKALEEDELVVYFQPQIDARENKLVGME 373 Query: 431 LMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQV 484 + R + +++P+ G+ + DRL + + + + W + L A+ + Sbjct: 374 ALVRWEHPIMGFIYPDKFIPLAEITGMIVQLDRLVMKKALTQFKKWDKAGLNPGKLALNL 433 Query: 485 TVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVA 544 ++ + F ++ + L CE K I EL E + + ++ ++ LG+ +A Sbjct: 434 AIKQIEENDFIEFIENIL-DCEDCSYKNIEFELTENQIMNNPEASIETLQKLSDLGISIA 492 Query: 545 VNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATG 604 ++ G S +++K L ++ LK+ ++++ + ++ + ++++ CS + +V A G Sbjct: 493 IDDFGTGYSSLAYLKRLPIDKLKIDRSFIKDLPQDADDAAITKTIISLCSSLNLKVIAEG 552 Query: 605 VRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 V + + ++Q G QG +++ ++ K + Sbjct: 553 VETEKQKNFILQNGCQFIQGYYYSRPLSIEDMTKYLIE 590 >UniRef50_A1SZV0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV0_PSYIN Length = 711 Score = 554 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 82/501 (16%), Positives = 192/501 (38%), Gaps = 31/501 (6%) Query: 157 WLQRQLAGQELLET-----RATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 W+Q G + + + ++ + + + ++ + Sbjct: 198 WIQGLRHGAKEEQRGGWNHSLNQADGSRLNVQHQAEVFYDENGAAKVVSGTVVDVTELTQ 257 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + I A D TGL NR F ++ +E ++ G G V+ + L +F ++D Sbjct: 258 AQDQ----ILQLAHFDSLTGLANRNAFRKRVELAMERAKQYGHLGAVLFLDLDNFKRIND 313 Query: 272 TWGHSQVEEQFFTLTNLLSTFMM------------RYPGALLARYHRSDFAALLPHRT-L 318 T GHS ++ + L+ + L++R +F LLP + Sbjct: 314 TLGHSIGDQLLQEVARRLTDIVRGSDSICGTNFNHAIDDNLISRLGGDEFTVLLPEIGKI 373 Query: 319 KEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQ 377 K+AE A +++ ++ + N D IGI + G++ + ++++A++A Sbjct: 374 KDAEHAARRVLNSIGDIINLSGHDIVVTPSIGIAIFPHHGENVDSLLKNADAAMYYVKRA 433 Query: 378 GGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIF 436 G N + ++ +S+ + + + + + + +P + G++ E + R Sbjct: 434 GKNDYELFVNSMNVVAKRRLELESFLRHAIDNKELSVNYQPQIDIPTGRIIGAEALLRWN 493 Query: 437 DGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLI 490 VS E++P+ + GL + ++ W ++ L A+ ++V+ Sbjct: 494 SAELGMVSPVEFIPIAEETGLISPIGEWVLREACRQVKEWRDDGLPEIQIAVNISVQQFA 553 Query: 491 RPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGL 550 + + + L++ + +E+ E + + + + LG+ +A++ G Sbjct: 554 KQSLDKLVSKVLLET-GLPVHCLELEITENMLMDDVEGAVETLHKLKDLGINLAIDDFGT 612 Query: 551 TLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSE 610 S S++K ++ LK+ + + + + Q+++ V A GV S+ Sbjct: 613 GYSSLSYLKRFPIDKLKIDRSFITYVTTEPSDAAVTQAIISMAHNLGLTVIAEGVEEASQ 672 Query: 611 WQTLIQRGVTGGQGDFFASSQ 631 + L Q QG +F+ Sbjct: 673 LEFLRQHHCEEMQGYYFSRPL 693 >UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BF2_DECAR Length = 1038 Score = 554 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 84/447 (18%), Positives = 171/447 (38%), Gaps = 22/447 (4%) Query: 205 EIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLP 264 +I +E + I+ A D T L NR + +L+ L + H ++ I L Sbjct: 588 DITKRKE----AEEQIQFLALYDPLTHLPNRRLLNERLSKALTSSGRQRRHAALLFIDLD 643 Query: 265 DFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL------ 318 +F M++D+ GH + + L + ++R +F LL + Sbjct: 644 NFKMINDSMGHDIGDLLLRQVALRLRESVR--SNDTVSRLGGDEFVILLEELSPNIHDAT 701 Query: 319 KEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQ 377 + E IA +++ ++ IG + + + E +++ A+ A A Sbjct: 702 TQIEHIAQKMLDSLVQPYKFGEFSHHCTASIGAIPFMDATETIESLLKSADMAMYKAKAA 761 Query: 378 GGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFD 437 G N +D ++ + + Q LY +P V + G V E + R Sbjct: 762 GKNRLFFFDPAMQTEVEARAALERDLRQAQREKQFVLYLQPQVDQSGHVSGAEALIRWQH 821 Query: 438 G-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPE------ENLAIQVTVESLI 490 + + E+ + + L + + L W + LAI V+ Sbjct: 822 PTHGLILPGEFTHVAEETRLILPIGQWVLEEACKQLVIWQKNPDTAHLTLAINVSALQFR 881 Query: 491 RPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVN-ALGVRVAVNQAG 549 P F + + + + R+ +E+ E+ + + I ++++ LGV ++++ G Sbjct: 882 NPDFVDDVARAIHE-SGALASRLKLEITESLLLEDIDGTIERMQVLKNQLGVGLSLDDFG 940 Query: 550 LTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRS 609 S S++K+L ++ +K+ V++I + + ++++ S V A GV + Sbjct: 941 TGYSSLSYLKQLPLDQIKIDRSFVKDIHCNPNDAAIAEAVIALGRSFSLNVIAEGVETIE 1000 Query: 610 EWQTLIQRGVTGGQGDFFASSQPLDTN 636 + LI RG QG F P+D Sbjct: 1001 QRDALIARGCLTFQGYLFGRPGPIDAF 1027 >UniRef50_A1T0Y1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T0Y1_PSYIN Length = 727 Score = 554 bits (1428), Expect = e-156, Method: Composition-based stats. Identities = 83/460 (18%), Positives = 186/460 (40%), Gaps = 20/460 (4%) Query: 196 SSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTH 255 SS + + ++I + + + + A D TGL NR F + L+ + ++ Sbjct: 251 SSGIVLVFQDIS----ERKKTEQQLTRLAQYDCLTGLPNRALFTSLLSQAISRSDRRKNK 306 Query: 256 GIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH 315 ++ + L F ++D+ GH + + L + G ++R +F +L Sbjct: 307 LALLFLDLDRFKQVNDSLGHDVGDLLLQQVAQRLQ--LATLEGGTVSRLGGDEFMVILEE 364 Query: 316 RTLK--EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQD-TEQVMEHAESATR 372 + +A +A ++I ++D N + IGI + +++ A+ A Sbjct: 365 VNSESHKAAKLAQKMITSLDAPFNILGREVLISTSIGIALCSGSTQCIDSLLKRADMAMY 424 Query: 373 NAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHREL 431 A QG N++ Y L ++ ++ + L R L+ +P V GQ+ E Sbjct: 425 RAKEQGRNNFQFYTAELQQQASKSIELENRLRHALQRKEFFLHYQPQVDTNSGQIIGLEA 484 Query: 432 MCRIFDGNE-EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-------AIQ 483 + R + +S E++P+ + GL + L W L A+ Sbjct: 485 LLRWQPDGQALISPEEFIPVAEEAGLIVPIGEWVLREACSQLHRWHRSGLLSPTVKMAVN 544 Query: 484 VTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRV 543 ++V L L L + + ++ +E+ E V + + ++ ++A+G+++ Sbjct: 545 LSVRQLEHTSLLSTLTQILQET-GLKPSQLELEITETAVMKDPDLVVNILHSIHAMGIQL 603 Query: 544 AVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYAT 603 +++ G S ++K L + +LK+ + +I + +Q +++S++ V A Sbjct: 604 SLDDFGTGYSSLRYLKLLPLHVLKIDRSFINDIGGKQRDQAILESIIYLSRNLDLTVVAE 663 Query: 604 GVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 GV ++ + L + QG + + + N++K + Sbjct: 664 GVETQEQLDFLSRFNCHSIQGYYISKPKSA-ANIEKLLHK 702 >UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUG6_METML Length = 836 Score = 554 bits (1428), Expect = e-156, Method: Composition-based stats. Identities = 86/449 (19%), Positives = 179/449 (39%), Gaps = 21/449 (4%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 ++ +I ++ +++ A D T L NRL +++ + G G ++ Sbjct: 389 SVFTDISESKASSEQIE----HLAFYDPLTNLPNRLLLLDRVRQAFSSSSRTGKKGALLF 444 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT--L 318 + L F +L+DT GHS + LS + G +AR+ +F +L Sbjct: 445 VDLDHFKVLNDTLGHSTGDLLLKLQAERLSHCVR--AGDTVARFGGDEFVVVLEDLDRNA 502 Query: 319 KEAESIAGQL----IKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRN 373 EA +IA Q+ + + IGI + + E +++ A+ + Sbjct: 503 TEAAAIAEQIGNKILSTLHEPCQFGTHQYQSTSSIGITLFSGDEHEIEDLLKQADISMYQ 562 Query: 374 AGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMC 433 A G N+ +D ++ EK + + + + LY + V ++ E + Sbjct: 563 AKKAGRNTLRFFDPAMQEKLSVRASLESELRYAIEKQQLALYYQVQVDDNQRMVGAEALI 622 Query: 434 RIFDGNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW------PEENLAIQVTV 486 R VS E++P+ + L + I+ L W +A+ V+ Sbjct: 623 RWIHPERGTVSPIEFIPIAEESALILDVGHWVINTACMQLAEWAKSVEKKHLMIAVNVSA 682 Query: 487 ESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVN 546 F + + + K R+ +EL E+ + + + + + + ALGV+++++ Sbjct: 683 HQFRALDFVQSTQQAI-DLHKIDASRLKLELTESVILEDVDDVIAKMHALKALGVKLSLD 741 Query: 547 QAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVR 606 G S S++K+L ++ +K+ VR++ + ++V+++++ + V A GV Sbjct: 742 DFGTGYSSLSYLKKLPLDQVKIDQSFVRDLAYDPNDAIMVKTIIDLANNFRINVIAEGVE 801 Query: 607 SRSEWQTLIQRGVTGGQGDFFASSQPLDT 635 + E L G QG F P++ Sbjct: 802 TELELDILKGYGCRLYQGYLFGRPVPIEQ 830 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 553 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 85/469 (18%), Positives = 177/469 (37%), Gaps = 17/469 (3%) Query: 178 GERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLF 237 G + +G + E + + +L +H R + + A D T L NR Sbjct: 169 GAFDAEEIGLLEELANNLAHGILSL-----RIMAEHKRYEEQLAYQATHDPLTALPNRNL 223 Query: 238 FDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYP 297 ++++ L ++ V+ + L F ++D+ GH + ++ + LS + + Sbjct: 224 LADRISQALAWAQRHRRWIAVLFVDLDFFKFVNDSLGHGKGDQLLKMVAERLSERVRQV- 282 Query: 298 GALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR- 355 LA F +L R +EA+ + +A+ + IGI + Sbjct: 283 -DTLAHQGGDKFVVVLTDLRGNEEADRAVHVIREAISLPFLMDGQELVISCSIGITVYPK 341 Query: 356 SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLY 415 G+D + ++++AE A A QG N + Y L E+ + + + L L+ Sbjct: 342 DGEDAQTLVKNAEVAMYRAKEQGRNCFRYYTRELNERVASRMSMEKHLRKALENEEFELW 401 Query: 416 QKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLR 473 +P G++ E + R + V ++P+ + GL + + R Sbjct: 402 YQPQADLNTGRLSGMEGLIRWRNAELGMVQPGSFIPLAEETGLIVQIGEWVVRTACLQNR 461 Query: 474 YWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISR 528 W + L A+ ++ + L + + + +E+ E+ V + Sbjct: 462 RWQDAGLSPLTVAVNLSPRQFRDRELTGVIAGVLRET-GLDPRYLGLEIVESMVMHDVES 520 Query: 529 LQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQS 588 ++ + ALGV+++++ G S S++K LK+ VR+I + + +S Sbjct: 521 AAAMLNELKALGVKLSMDDFGTGYSSLSYLKRFPFAKLKIDLSFVRDIMTDPGSAAIAKS 580 Query: 589 LVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNV 637 ++ + V A GV + + + L G QG + + P Sbjct: 581 IISMAHNLNLSVVAEGVETEGQLEFLRAHGCNEIQGYYLSRPLPAAEFE 629 >UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionella ferruginea ES-2 RepID=C5V4D4_9PROT Length = 925 Score = 553 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 102/499 (20%), Positives = 201/499 (40%), Gaps = 18/499 (3%) Query: 153 LAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQ 212 +A R + QL G + E+R R +G + P A TL R+I + Sbjct: 433 IAARKEKLQLTGIDNFESR-YRTRSGRLMDVDVSVQVVQLPNGRIAFQTLFRDIT----E 487 Query: 213 HSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDT 272 + I A D TGL NR ++L+ + + +M + L F ++D+ Sbjct: 488 QKQTSAQIEHLAYHDQLTGLPNRRLLKDRLSQAVSSVVRRDAKLALMYLDLDHFKDVNDS 547 Query: 273 WGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIKA 331 GH + + L + LAR +F LL + SIAG++I Sbjct: 548 LGHGAGDVLLQIVAERLQGCVR--ADDTLARMGGDEFVLLLNGVNGADDVASIAGKIIHE 605 Query: 332 VDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLP 390 + + +GI G+D + ++++A+ A A QG ++ Y +L Sbjct: 606 LSQPMRIGNDELRITPSLGISMCPQDGRDADDLLKYADVALYQAKQQGRATYRFYTQALH 665 Query: 391 EKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYM 448 ++ V+ L+ L R LY +P V +G++ E + R +VS A ++ Sbjct: 666 DQSVERVQLERLLRHALERNEFELYYQPQVDLCDGRIIGCEALIRWNHPGMGQVSPARFI 725 Query: 449 PMVLQFGLSEEYDRLQISRLIPLLRYWPEEN----LAIQVTVESLIRP-RFQRWLRDTLM 503 P+ Q GL + + + + W ++ ++ V+ +R + LRD L Sbjct: 726 PIAEQSGLIIDIGNWVMKQACHQAKRWHDQGWDIKVSFNVSARQFMRSGELMQSLRDALA 785 Query: 504 QCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNV 563 + R+ +EL E+ + + ++ + ALG+++A++ G S S+++ + Sbjct: 786 E-SGVDPTRMEVELTESLLL-DPQGMGEILHEIRALGIQLALDDFGTGYSSLSYLRRFPI 843 Query: 564 ELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQ 623 +LK+ V + ++ +V++++ + A G+ + ++ L +G GQ Sbjct: 844 SILKIDRSFVSAADNNADDAEMVKTIIGMAHNLRMSLIAEGIETNAQRDMLETQGCEVGQ 903 Query: 624 GDFFASSQPLDTNVKKYSQ 642 G ++ P Q Sbjct: 904 GYHYSCPVPATEFSLLLQQ 922 >UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H6_9PROT Length = 837 Score = 553 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 88/479 (18%), Positives = 181/479 (37%), Gaps = 17/479 (3%) Query: 178 GERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLF 237 + G + + + + T I + + I + A D T L NR Sbjct: 357 RKNGEVYPKWLTITAVKDNEGVTTEYVAIFSDITLRKHAEEEIYTLAFYDSLTKLPNRRH 416 Query: 238 FDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYP 297 +++ + +G ++ + + F +L+DT GH + ++ + + Sbjct: 417 LLDRINQARSISARSNHYGALLFLDMDRFKILNDTLGHDYGDLFLVEVSRRMRNCVR--D 474 Query: 298 GALLARYHRSDFAALLPHRTLKE------AESIAGQLIKAVDTLPNNKMLDRDDMIHIGI 351 +AR +F L+ IA ++ A+ K + IG+ Sbjct: 475 MDTVARIGGDEFVVLIEEIGTDNEEVSTKVALIAEKIRAALTEPYLLKDKEHHSSPSIGV 534 Query: 352 CAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRG 410 C + + + + ++ HA+ A A G N +D ++ + ++ Sbjct: 535 CLYLGNEESVDTLLRHADLAMYQAKESGRNGVRFFDPAMQLAVETRAALEADMRHAVTGK 594 Query: 411 GPRLYQKPAVTREGQVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLI 469 RLY + +T + + E + R VS A+++P+ + L E + Sbjct: 595 QLRLYYQIQLTSDHRPLGAEALIRWMHPVRGLVSPAQFIPIAEESSLILEIGHWVLETAC 654 Query: 470 PLLRYWPEEN------LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVG 523 L W + LAI V+ + + F + TL+ + R+ +EL E+ V Sbjct: 655 KQLVLWSKHERTRNLILAINVSAQQFNKHDFVDTVS-TLLHLHQLNPNRLKLELTESVVL 713 Query: 524 QHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQ 583 ++ + + + ALGV++A++ G S S++K+L ++ +K+ V ++ + Sbjct: 714 SDVADVVSKMHALKALGVKLALDDFGTGYSSLSYLKQLPLDQIKIDRSFVSDVTTDPSDA 773 Query: 584 LLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 ++VQ+++ V A GV + + L Q G QG F P+D Q Sbjct: 774 VMVQTIINLAHNFRMNVIAEGVETEDQLNFLKQNGCMAYQGFLFGKPMPIDEFEALLGQ 832 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 553 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 86/441 (19%), Positives = 179/441 (40%), Gaps = 15/441 (3%) Query: 203 LREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIR 262 R+I E I A DV T L NR+ F ++L + + ++ + Sbjct: 381 FRDITEQVEAQRH----ILRLAHYDVLTDLPNRVLFQDRLERAVVHALRHDRQAALLFLD 436 Query: 263 LPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK-EA 321 L F ++DT GH ++ + L + +AR +F +L + +A Sbjct: 437 LDGFKKVNDTMGHRAGDDLLKEVAVRLRGCVRMT--DTIARLGGDEFTVILDEISAANDA 494 Query: 322 ESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGN 380 +A +++ ++ D IGI + G +++++HA++A A G Sbjct: 495 SMVADKILASLHAPIFIDGRDVFIGTSIGISLFPIDGTSGDELLKHADTAMYQAKAAGKG 554 Query: 381 SWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN 439 + Y + ++ + T + Q + G +++ +P +V E + R Sbjct: 555 RFNFYSAEMTKREEHRLELETALRQAVEEGQFQVHYQPQKNLATNRVSGFEALVRWQHPR 614 Query: 440 -EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN----LAIQVTVESLIRPRF 494 +S +++P+ + L + D + + R W ++ +A+ ++ + R Sbjct: 615 LGMISPVDFIPLAEEMHLIDRIDMFVMRQACRKGRQWRDQGYDICMAVNLSGVNFSRDDL 674 Query: 495 QRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVS 554 +R L + + +E+ E+ V + V++ + ALGV++A++ G S Sbjct: 675 PEQVRQVLEDT-GFPAENLELEITESFVIDLEVDQREVLQRLRALGVKLAIDDFGTGYSS 733 Query: 555 TSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTL 614 S++K L V LK+ VR+I + + + +LV S++ +V A G+ R + L Sbjct: 734 LSYLKRLPVNTLKIDRSFVRDIARDSRDMMLVSSIIGIAHSLGLKVVAEGIEERDQLAIL 793 Query: 615 IQRGVTGGQGDFFASSQPLDT 635 + + QG A P + Sbjct: 794 LSQECDEIQGYLIAKPMPAEQ 814 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 553 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 84/451 (18%), Positives = 175/451 (38%), Gaps = 15/451 (3%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 + EI + R SR I+ A D T L NR +++ L + GT V+ Sbjct: 297 AIYAEITDQRAAASR----IQFLAHYDPLTLLPNRALLQDRMHQGLAHAAREGTRAAVLF 352 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LK 319 + L F ++D+ GH + + L + +AR +F +LPH + Sbjct: 353 LDLDRFKTINDSLGHLVGDHLLQEVAQRLKASVRE--DDTVARRGGDEFIVMLPHVDSAE 410 Query: 320 EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQG 378 +A +AG++I+A++ + IGI + D + ++ +A+ A + G Sbjct: 411 QAAHVAGKIIEAMEQTIPVNGYVLNVSFSIGISVFPDDAMDPDTLIRNADIAMYRSKASG 470 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG 438 N + + + + + + + RG RL +P G + E + R Sbjct: 471 RNQFQFFTADMNAHALERLALENDLHRAVERGEFRLMFQPQFEGSGSIIGAEALLRWQHP 530 Query: 439 N-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRP 492 V+ AE++P+ + GL + R +R W + L ++ ++ + Sbjct: 531 QRGLVTPAEFIPVAEETGLIVPIGTWVLERACQQVRAWRDAGLKKITVSVNISALQFSQK 590 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 +R L+ + + +EL E+ + ++ + +GVR+A++ G Sbjct: 591 NLLELIRR-LLAVSNIEPGTLELELTESVLMHDHVATSGLMSELKEMGVRMAIDDFGTGY 649 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S S+++ + LK+ VR++ + + +++ + +V A GV + + Sbjct: 650 SSLSYLRSFPISKLKIDQSFVRDLSDGGDAGAITGAIIGLAKNLNMRVIAEGVETAQQAS 709 Query: 613 TLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 L + QG FF+ + + Sbjct: 710 FLQAQCCDEFQGHFFSQPVSPEKFAELLRAE 740 >UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n=2 Tax=Proteobacteria RepID=Q2W1Z2_MAGSA Length = 1510 Score = 553 bits (1426), Expect = e-156, Method: Composition-based stats. Identities = 96/446 (21%), Positives = 187/446 (41%), Gaps = 15/446 (3%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 + +I + R++ A D TG+ NR ++L + ++ T V+ Sbjct: 1057 AIFSDISAIKSSQRRIE----FLATHDELTGIPNRSLLMDRLKHAVAQAKRQKTKLAVLF 1112 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE 320 I L +F +++D+ GH ++ T L + LAR +F A+L +L++ Sbjct: 1113 IDLDNFKVINDSLGHDVGDQLLKQATERLKHCVR--DSDTLARLGGDEFVAVLTDVSLEK 1170 Query: 321 AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGG 379 S+A +++ + + IGI + GQD+ +++HA++A A +G Sbjct: 1171 VNSVAARIVDFLGASFSINDKSLFVSASIGISVFPDDGQDSLTLLKHADTAMYRAKERGR 1230 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG 438 N + + D + + T + L R+ +P V G+V E + R D Sbjct: 1231 NQYQFFADEMKVIALQRLTLETGLRLALETKSFRMCYQPQVDIHTGEVVGAEALLRWRDP 1290 Query: 439 N-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRP 492 EVS A ++P+ GL + ++ + YW E+ L AI V+ L Sbjct: 1291 TLGEVSPAHFIPIAESCGLIGAIGETVFTMVLEQIAYWREKGLTVPRIAINVSAHQLRDA 1350 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 F + L + I IEL E+ + + I ++ ++ + +G++V+++ G Sbjct: 1351 GFAAKVGSWL-DSSGISSELIGIELTESALMERIDMVKEMLTSFDGMGMKVSIDDFGTGY 1409 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S S++K+L + LK+ V I +++ + +++++ +V A GV S + Sbjct: 1410 SSLSYLKKLPIHELKIDRSFVDGIALERDDRSIAKAIIDMSRALGMRVVAEGVESEEQLG 1469 Query: 613 TLIQRGVTGGQGDFFASSQPLDTNVK 638 L + G QG F + K Sbjct: 1470 VLKEEGCDMVQGYLFHRPLSPEAFAK 1495 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 553 bits (1425), Expect = e-156, Method: Composition-based stats. Identities = 89/456 (19%), Positives = 183/456 (40%), Gaps = 21/456 (4%) Query: 198 ALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGI 257 L ++ R+I + + + + I A D TGL NR ++L ++ G Sbjct: 652 GLLSVSRDITDRK----KAEQQIELLAFFDALTGLPNRRLLLDRLQRAGAACQRNEKLGA 707 Query: 258 VMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT 317 ++ I L +F L+DT GH + + L + +AR+ +F +L Sbjct: 708 LLFIDLDNFKDLNDTLGHDMGDRLLVQVAQRLQECVR--TSDTVARFGGDEFVVMLEGLD 765 Query: 318 LK------EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSG-QDTEQVMEHAESA 370 +AE +A +L+ ++ IGI + + +++++ A+ A Sbjct: 766 ADTALAALQAEQVAEKLLAQLNRPFEMGAQQHYSTPSIGITLFGDQRRTVDELLKRADLA 825 Query: 371 TRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRE 430 A G N+ +D + + + + + Q ++R ++ +P V ++ E Sbjct: 826 MYQAKAAGRNTQRFFDPDMQAQVTARSQLESDLRQGIARHELTVHLQPIVDGSTRLCGAE 885 Query: 431 LMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE------NLAIQ 483 + R +S A+++P+ + GL R + L W +A+ Sbjct: 886 ALVRWRHPVKGLISPADFIPLAEETGLILPLGRQVLQTACEQLVRWATHPATASFTIAVN 945 Query: 484 VTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRV 543 V+ +P F + TL + +R+ +EL E+ + + + + +GV Sbjct: 946 VSARQFRQPDFVAEVLGTLAGT-GANPQRLKLELTESLLLGDVEDTICRMAQLKRVGVGF 1004 Query: 544 AVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYAT 603 A++ G S S++K L ++L+K+ VR++ + +V++++ QV A Sbjct: 1005 ALDDFGTGYSSLSYLKRLPLDLVKIDQSFVRDVLTDPNDAAIVRTILALAKSLDLQVVAE 1064 Query: 604 GVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKK 639 GV + + L G G QG F PL+ ++ Sbjct: 1065 GVETAGQLSFLKLHGCEGFQGYLFGRPVPLEAFERE 1100 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 91/477 (19%), Positives = 195/477 (40%), Gaps = 18/477 (3%) Query: 178 GERGSNVLGTIYEWPPRTSSALDT--LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNR 235 G + +V TI R + + ++R+I +E R++ A D TGL NR Sbjct: 235 GRKPIDVSVTISAMKDRAGNIIGASKIVRDITQRKESQERIE----YLAHYDSLTGLPNR 290 Query: 236 LFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMR 295 ++L +E+ + ++ + + F +++D+ GH ++ + + + + + Sbjct: 291 TLLSDRLRIAIENARRYSIRLALLFVDIDRFKLVNDSLGHEIGDKLLKAVAQRMQSTVRQ 350 Query: 296 YPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAW 354 ++R +F LL T +A A +LI ++ + + IGI + Sbjct: 351 --ADTVSRVGGDEFVVLLSRIETATDAARSAEKLITSISQPYQIEEHELLLTASIGISIY 408 Query: 355 RS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPR 413 G+D + +A++A +A QG N + Y + L +R + LSR Sbjct: 409 PDNGKDASSLTRNADAAMYSAKGQGRNRYQFYSEDLTYAAAERLRLEHDLRGALSRDEIF 468 Query: 414 LYQKPAVT-REGQVHHRELMCRIFD-GNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPL 471 +P + G+V E + R G +S A ++P+ GL + + Sbjct: 469 PLYQPQIELATGRVIGVEALMRWNRAGQGLISPASFIPVAEDSGLILALGEYILRKACLQ 528 Query: 472 LRYWPEE-----NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHI 526 R W E +A+ V+ + F + L + + + +E+ E+ V Q + Sbjct: 529 ARQWHEHQGFQGTIAVNVSAVQFRQNDFTDVVLRVLSET-GFPPECLELEVTESVVMQGL 587 Query: 527 SRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLV 586 + + ++ + G+++A++ G S S++++ ++ LK+ VR++ + Q ++ Sbjct: 588 ESVVQKMGILESHGIKLAIDDFGTGYSSLSYLRQFAIDRLKIDQSFVRDLPGDADAQAII 647 Query: 587 QSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 +++V +V A GV + ++ + L T QG +A + R Sbjct: 648 RAIVAMGRSLGLRVMAEGVETEAQARFLQDIECTESQGYLYARPMKSNDFEAWLKTR 704 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 88/441 (19%), Positives = 179/441 (40%), Gaps = 17/441 (3%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + + IR+ A D++TGL NR ++L L + G +++I L +F L+D Sbjct: 727 RRKAAEDEIRNLAFFDLQTGLPNRRLLLDRLQQALAASARHRRQGALLLIDLDNFKTLND 786 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK------EAESIA 325 T GH + + + L++ + + G +AR +F +L + + +AE++A Sbjct: 787 TLGHDKGDLLLQQVAQRLASCV--HEGGTVARLGGDEFVVMLENLSEHLEAAATQAETLA 844 Query: 326 GQLIKAVDTLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAI 384 +++ ++ + + IGI + + TE +++ A+ A A G N+ Sbjct: 845 KRILASLKQTYSLDGYEYQSTASIGITLFSEQQETTEDLLKRADLAMYQAKAVGRNTLRF 904 Query: 385 YDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVS 443 +D + + + ++ LY + V +G + E + R V+ Sbjct: 905 FDPEMQAVVTSRAALEAGLRRAVTSDEFLLYYQAQVDGQGHLTGCEALLRWQHPERGLVA 964 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP------EENLAIQVTVESLIRPRFQRW 497 E++ + GL R + L W +A+ V+V + F Sbjct: 965 PGEFIALAEDTGLILPLGRWVLDAACTQLAQWATRPEMAHLTVAVNVSVRQFHQADFVNQ 1024 Query: 498 LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 + T++ + +R+ +EL E+ + + + + ++ GV +++ G S S+ Sbjct: 1025 VL-TVLDSTGTNPQRLKLELTESLLIGDVEDVIAKMSILKEKGVGFSLDDFGTGYSSLSY 1083 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 +K L ++ LK+ G VRNI + + + ++ V A GV ++ L + Sbjct: 1084 LKRLPLDQLKIDQGFVRNILIDPNDAAIARMVIALGDSLGLAVIAEGVEIEAQRDFLARL 1143 Query: 618 GVTGGQGDFFASSQPLDTNVK 638 G QG F PLD Sbjct: 1144 GCHACQGYLFCRPLPLDQFEA 1164 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 92/456 (20%), Positives = 185/456 (40%), Gaps = 16/456 (3%) Query: 185 LGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLAT 244 + TI + + S + ++ +I + R I+ + D T L N+ +++ Sbjct: 871 ISTIKDADGKISQHI-GIISDISERKVAEER----IQFLSNFDPLTNLPNKNLLNDRTKL 925 Query: 245 LLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARY 304 L +++ T +M + L F ++++ G S ++ L +M P + R Sbjct: 926 ALATAKRLKTAVTLMFVDLDRFKFINESLGPSIGDQVVKELAERFVAYMR--PEDTVCRQ 983 Query: 305 HRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQV 363 +F LLP+ + A +A +L+ V N IGI A+ G+ EQ+ Sbjct: 984 GGDEFILLLPNTDAEGAAHVAKKLLDIVAQPFNFHGQKIVLTASIGISAYPQDGESFEQL 1043 Query: 364 MEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-R 422 + A++A A +G N++ + + E+ + + + + LY +P + Sbjct: 1044 AQSADAALYRAKYEGRNNFQFFARQMHEQAHDILLLESELRSAIEHEEFLLYYQPQYDSK 1103 Query: 423 EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL- 480 ++ E + R VS A ++P+ + GL E + + L W E L Sbjct: 1104 TSKIIGLEALIRWQHPEKGLVSPAVFIPIAEESGLIAEIGDWVLRTAVKQLASWQEAGLG 1163 Query: 481 ----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLV 536 A+ ++V + + L K + +EL E + R V+ + Sbjct: 1164 AVPVAVNLSVVQFHQDTLYGSVCQILRDT-KVDPSMLELELTEGIAMEDSERTLNVLNQL 1222 Query: 537 NALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGT 596 N+LGVR++++ G S S++K+ ++ LK+ VR I ++ ++ +++ Sbjct: 1223 NSLGVRLSIDDFGTGYSSLSYLKKFKIDKLKIDQSFVRGIGSHPQDAAIITAIISMAKSL 1282 Query: 597 STQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQP 632 S + A GV + + LI QG +F+ P Sbjct: 1283 SFKTIAEGVETLEQLNFLIANSCDEIQGYYFSKPLP 1318 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 91/487 (18%), Positives = 187/487 (38%), Gaps = 16/487 (3%) Query: 165 QELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYA 224 + LE R +G L L+ ++ + RL+ A Sbjct: 1028 EHNLEFRVVHPDGSIHWVQAIGNAEYDSQGHPIRLRGLIMDVTERKTSQERLN----YMA 1083 Query: 225 AQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFT 284 D T L NRL +L ++ + T V+ I L F ++D+ GH+ + Sbjct: 1084 HHDHLTDLPNRLLLKARLDQSIQQATRKRTKLAVVFIDLDRFKHINDSMGHAAGDALLQQ 1143 Query: 285 LTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDR 343 L L + +AR +F A+L ++ A + +L+ + + Sbjct: 1144 LAQRLRQVLR--SSDTVARISGDEFVAVLEDIEDIQHASMVVAKLMTVFEEPFPLEGQII 1201 Query: 344 DDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTL 402 +G+ + G DT ++ +A+SA A +G N++ Y + + V + Sbjct: 1202 HMTSSMGLSLFPDDGMDTAILLRNADSAMYRAKEEGRNTYCFYAEEMTSAAFEYVLFENA 1261 Query: 403 IEQMLSRGGPRLYQKPAVTREG-QVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEY 460 + L R L +P + + E++ R VS A+++P+ Q GL +E Sbjct: 1262 LRGALKRNEFYLVYQPQIDLSSHRWVGMEVLLRWHHPELGIVSPAQFIPIAEQSGLIQEI 1321 Query: 461 DRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIII 515 + R + W ++ + A+ V + + F ++D L + + Sbjct: 1322 GTWVLYRACCQAKTWLDQGIDFGHIAVNVAAPQIQQNNFVHLVQDAL-DSSGLPSPHLEL 1380 Query: 516 ELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRN 575 EL E V + ++ +G+ +A++ G S S++K L + LK+ VR+ Sbjct: 1381 ELTEGLVMHQTEDRIKQLEVLQDMGIYLAIDDFGTGYSSLSYLKRLPINKLKIDKSFVRD 1440 Query: 576 IEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDT 635 I T + + ++++ + ++ A GV + L ++G QG ++ P + Sbjct: 1441 IPHDTNDMAISEAVIALGKALNLRIIAEGVEQEIQATFLREKGCHEAQGYLYSKPLPPEE 1500 Query: 636 NVKKYSQ 642 + +++ Sbjct: 1501 ITQLFAE 1507 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 76/466 (16%), Positives = 179/466 (38%), Gaps = 17/466 (3%) Query: 187 TIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLL 246 +I S + +R+I + +L+TL A +D TGL NR +++ L + Sbjct: 180 SISPQAVGASFIFNIFVRDISQRKADEEKLETL----ATRDELTGLINRFSYNHLLKKEV 235 Query: 247 EDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHR 306 ++ V+ + L F ++D+ GH ++ N LS + +AR Sbjct: 236 ALAKRHMESLAVLFLDLDGFKNINDSLGHDVGDQLLRETANRLSACIRE--SDTVARIGG 293 Query: 307 SDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVM 364 +F ++P + + + +++ + + IGI + G + E ++ Sbjct: 294 DEFLIIMPGIKDVHDPRFLCERILNMIGQPYLIGTQECFVGASIGISLYPLDGDNVESLV 353 Query: 365 EHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE- 423 ++A++A A G N++ + ++ E+ + + + + +L +P V Sbjct: 354 KNADTAMYQAKDSGRNAYKFFTPAMGEEAFKRMEMERALRYAIEKNQFKLLYQPQVELSS 413 Query: 424 GQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN--- 479 G++ E + R +S + ++ ++ L + + W + Sbjct: 414 GRILGVEALLRWTHPEWGPISPSVFISLIENTNLILPIGEWVLDEACKQNKAWQALHPGF 473 Query: 480 ---LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLV 536 +A+ + + L Q + + +E+ E I ++ + Sbjct: 474 PLRMAVNFAARQFAQADLVETVAKAL-QKSGLAAEFLELEITEGSAMNDIELNIRKMQAL 532 Query: 537 NALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGT 596 LGV +A++ G S +++K +++LK+ + I+ ++ +V ++ E Sbjct: 533 KELGVSIAIDDFGTGFSSLAYLKRFPIDILKIDKSFLDEIQHGKKDAAIVATISEMAHSL 592 Query: 597 STQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 +V A GV ++ + + L G QG F+ P + + + Sbjct: 593 GMEVIAEGVETKYQLEFLRGHGCDMIQGYLFSRPVPPEQIAEILQK 638 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 88/456 (19%), Positives = 178/456 (39%), Gaps = 16/456 (3%) Query: 197 SALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHG 256 S L +I +EQ +R ++ A D T L NR+ +++L + E Sbjct: 177 SHFVALFTDISERKEQEAR----VQHMAEYDALTDLPNRVLVNDRLHQAIRQAELQHNQL 232 Query: 257 IVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR 316 V+ + L F ++DT GH +E + L+ + + R +F +LP Sbjct: 233 AVLFVDLDHFKNINDTLGHCAGDELLKEVARRLAGAVRGL--DTVGRTGGDEFVLILPSI 290 Query: 317 TLK-EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGIC-AWRSGQDTEQVMEHAESATRNA 374 EA IA ++++ + IGI G D + ++ +A+ A +A Sbjct: 291 NQPGEAAQIAERILRTIQQPFQIGEHSLVVGCSIGISLMPDDGSDIQTLLMNADLAMYHA 350 Query: 375 GLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREG-QVHHRELMC 433 G N++ Y + + + + + + + L +P G ++ E + Sbjct: 351 KAHGRNTFRFYTREMNTQVAERLLMENRLRRAMEQEQLYLVYQPQYDMAGQRLLGCEALL 410 Query: 434 RIFDGNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVE 487 R D +E + ++P+ GL R + + W L A+ V+ Sbjct: 411 RWRDPDEGLIMPGRFIPVAEDTGLIVPLGRWVLDQACRQASLWLRAGLEPMRVAVNVSAH 470 Query: 488 SLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQ 547 L+R F +R+ L Q + +E+ E+ + + ++ A+GVR+A++ Sbjct: 471 QLMRHDFIDDVREAL-QRHALPGHCLELEVTESTLMADADLASRQLAVIKAMGVRLAIDD 529 Query: 548 AGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRS 607 G S +++K +L+K+ + ++ EN +V ++V + A GV + Sbjct: 530 FGTGYSSLAYLKRFAPDLVKIDRSFISDLPGDEENAAIVSAIVHLAGALGMETLAEGVEN 589 Query: 608 RSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 ++ + L G QG S + ++ Q+ Sbjct: 590 ENQQRFLQTLGCEAMQGYLLGSPLAEEMMTRRLEQQ 625 >UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D1W4_DEIDV Length = 856 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 120/499 (24%), Positives = 222/499 (44%), Gaps = 21/499 (4%) Query: 160 RQLAGQELLETRATRILNGERGSNVLGT--IYEWPPRTSSA--LDTLLR--EIQNAREQH 213 R+LAG L + + + E G VLGT +YE S A +D L+R ++ +H Sbjct: 358 RELAGIHGLCSCMSLPVLDEHGE-VLGTFALYERSGAMSGAAHMDQLVRARDLAALAMRH 416 Query: 214 SRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTW 273 +L +R A D TGL NR F +LA +LE E+ ++ + L +F ++DT Sbjct: 417 HQLTAQLRHQAQHDALTGLPNRSLFTERLAEILEQSERSRASTALLFVDLDEFKGVNDTV 476 Query: 274 GHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVD 333 GH + + + L R G ++AR +F +LP A ++A +++ + Sbjct: 477 GHHVGDYVLQAVADRLLGCARR--GDVVARVGGDEFTLVLPFAEEPHAITVARRVLNELT 534 Query: 334 TLPNNKMLDRDDMIHIGICA-WRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK 392 + IGI ++G+D + ++ HA+ A A + + +A+++ L ++ Sbjct: 535 RPFVVQGRAFHLGASIGISVSPQAGRDGQTLLRHADLAMYRAKRE-KSGFAVFEAQLNQQ 593 Query: 393 GRGNVRWRTLIEQMLSR--GGPRLYQKPAV-TREGQVHHRELMCRIFDGN-EEVSSAEYM 448 + ++ + + + L L+ +P V +GQV E + R + VS A+++ Sbjct: 594 AQLRLQLASDLREALREPGANLELHYQPQVRLHDGQVVGAEALVRWRHPHLGMVSPAQFI 653 Query: 449 PMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLM 503 P+ G+ + W +A+ V+ RP F + TL Sbjct: 654 PVAEDTGMIVPLGTWVMEEACRQAVAWAAAGHGAMRVAVNVSALQFARPDFVDTVSATL- 712 Query: 504 QCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNV 563 + + R+ +EL E+ V + + + + ALGV VAV+ G S S+++ L + Sbjct: 713 RATGLEAGRLEVELTESAVMEDVKESVERMERLRALGVSVAVDDFGTGYSSLSYLQRLPL 772 Query: 564 ELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQ 623 +LK+ ++N+ ++ +VQ++V + + A GV + E + LI+ G Q Sbjct: 773 NVLKIDRTFIQNLGVNATSRSVVQAIVGLAQHLNLECVAEGVETPDEREALIEVGCRYAQ 832 Query: 624 GDFFASSQPLDTNVKKYSQ 642 G FFA P ++ SQ Sbjct: 833 GFFFAKPLPAPALLEWLSQ 851 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 81/467 (17%), Positives = 178/467 (38%), Gaps = 11/467 (2%) Query: 178 GERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLF 237 G G + RT + T + R + IR A D+ T L NR Sbjct: 367 RREGPPYSGEMTVTAVRTRAGETTHYVAAITDITKRKRDEEHIRFQANFDMLTHLPNRHL 426 Query: 238 FDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYP 297 ++L + ++ G VM + L F ++D++GHS +E L + Sbjct: 427 IMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQINDSYGHSAGDEVLKLTARRLRNCVR--I 484 Query: 298 GALLARYHRSDFAALLPHRTLKEAES-IAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS 356 + R +F +L + + A + IA +++ ++ + + +GI + Sbjct: 485 SDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILYSLSEPFPIGGTEVFCIPSVGITYFPD 544 Query: 357 -GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLY 415 G+ ++ +A+ A +A G +AI+ + + + + + L+R L+ Sbjct: 545 HGETAPDLLRNADVAMYHAKQGGERRYAIFTPDMARRSLALLTMESDLRHALARDEFELH 604 Query: 416 QKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRY 474 +P V + + E + R ++ +++P+ + GL R + + Sbjct: 605 FQPKVRADLTLIGAEALIRWRHPEKGLINPGDFIPLAEESGLILPIGRWTLREACDRVMS 664 Query: 475 WPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRL 529 W E L ++ V+ +R L++ + + + +E+ E + + Sbjct: 665 WRAEGLTIPSVSVNVSPRQFQDQTLVETVRQILVET-GLEPEALDLEITETVMTGDVEHA 723 Query: 530 QPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSL 589 +R + LGV ++++ G S +++K ++ LK+ VR++ ++ +V ++ Sbjct: 724 VGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVSTI 783 Query: 590 VEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTN 636 + V A GV + + L R QG ++ P Sbjct: 784 IALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSRPLPPAEF 830 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 84/476 (17%), Positives = 190/476 (39%), Gaps = 16/476 (3%) Query: 169 ETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDV 228 E A E + + + T+ R+I + + +R A D Sbjct: 343 EIAARLADGREIPVSQVVLAHGGANEMPEFFSTIARDIT----ERKHFEQELRRQATHDA 398 Query: 229 KTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNL 288 TGL NR+ ++Q+ ++ + V+ + + +F ++++ GH+ + Sbjct: 399 LTGLPNRILLEDQIEAVVAHSARSHKLASVLFLDIDNFKRINESLGHAAGDAMLRHAAQR 458 Query: 289 LSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIKAVDTLPNNKMLDRDDMI 347 L + P ++ARY +F +L + + +I ++ A +T + Sbjct: 459 LRDCVR--PTDVVARYGGDEFTIVLGDLSHVDNIPAILHKVRAAFETPLVISGQEVYASF 516 Query: 348 HIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQM 406 +G+ + G D ++++A++A + G N + Y + +G+ + T + + Sbjct: 517 SVGVSVYPHDGDDGATLLKNADTAMYRSKASGRNRYQFYAPEMNARGQELLSLETDLRRA 576 Query: 407 LSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQ 464 L RG RL+ +P + R+ ++ E + R + ++ +++P++ GL Sbjct: 577 LDRGEFRLHYQPQLDLRDNRIAGVEALLRWKHPRDGVIAPGDFVPLLEDTGLIVPVGEWV 636 Query: 465 ISRLIPLLRYWPEENLA-----IQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAE 519 + R E +A + V+ R + L + E + +E+ E Sbjct: 637 LRNACTQYRACRESGVAPVRISVNVSARQFREDTLLRQVEQVLRE-ECMPPHHLELEITE 695 Query: 520 ADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKR 579 + Q ++ ++ ++ALGVR+A++ G S +++K ++ LK+ +R+ + Sbjct: 696 STAMQDVAATGDILAALDALGVRLAIDDFGTGYSSLAYLKRFPLDALKIDQAFIRDAPRD 755 Query: 580 TENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDT 635 + ++ + +V A GV + + L +R QG F+ P D Sbjct: 756 ANIAAIAEASISLGHKLGLEVVAEGVETAEQLAFLRRRACDLIQGFHFSRPLPADA 811 >UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellular organisms RepID=Q5P8Z7_AZOSE Length = 1008 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 93/449 (20%), Positives = 179/449 (39%), Gaps = 16/449 (3%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 T + +I + +E +R++ A D TGL NR+ F ++ A E+ ++ Sbjct: 525 TFVHDITDRKEAQARIE----YLAHHDALTGLPNRVLFRDRFALATAWAERAHAKVALLF 580 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE 320 + L F ++DT GH + + L + ++R +F L + Sbjct: 581 VDLDHFKTINDTLGHPVGDGLLQGVALRLRECLRET--DTVSRLGGDEFLIALTDIRDPQ 638 Query: 321 AESIA-GQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQG 378 A + A ++ + + + + + IGI W G+D + ++++A++A A G Sbjct: 639 AINSATAKIFDTLTRPFELEGHELTNTMSIGIAIWPDDGEDFDTLLKNADTAMYQAKRAG 698 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIF- 436 N+W Y + + ++ RT + L L+ +P + G V E + R Sbjct: 699 RNTWRFYTEQMNANAVEQLQLRTALHSALENDEFLLHYQPQINLASGHVVGVEALLRWHW 758 Query: 437 DGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW-----PEENLAIQVTVESLIR 491 D E V ++P + GL + W PE +A+ ++ R Sbjct: 759 DKRELVPPDRFIPAAEESGLIVPIGDWVLREACMQAVRWTRQGLPELTIAVNLSAVQFRR 818 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 +R + L R+ +EL E+ + + +R + +LGVR++++ G Sbjct: 819 GDLERSVVRAL-SLSGLDPARLELELTESLLLVDTESVIETLRRLKSLGVRLSIDDFGTG 877 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S +++K V+ LK+ VR+I ++ +V+++V QV A GV S Sbjct: 878 YSSLAYLKRFAVDKLKIDQSFVRDIATDPDDAAIVRAIVSMAHTLKLQVIAEGVESEDID 937 Query: 612 QTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 + L QG +A P D + Sbjct: 938 RFLHIFNCDEAQGYHYARPMPGDALAEWL 966 >UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Acidovorax RepID=A1TLA7_ACIAC Length = 850 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 103/497 (20%), Positives = 185/497 (37%), Gaps = 25/497 (5%) Query: 155 VRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHS 214 R + LE + T +V G + R+I + Sbjct: 350 HRRVLAARQPFRDLELQRTAADGRVSWVSVSGIPVFSADGAFLGYRGVGRDIT----ERK 405 Query: 215 RLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWG 274 R+D I A D TGL NR ++L + + +HG ++ + L +F L+DT G Sbjct: 406 RVDAEIERLAFFDPLTGLPNRRLLTDRLRRAIGTAARERSHGALLFLDLDNFKDLNDTLG 465 Query: 275 HSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLP------HRTLKEAESIAGQL 328 H + L G ++R+ +F L HR +A +A ++ Sbjct: 466 HDMGDRLLVQAAQRLLACAG--AGDTVSRFGGDEFVVLAEGLPGDMHRARADAAVLANRI 523 Query: 329 IKAVDTLPN-NKMLDRDDMIHIGICAWRSGQDTEQ----VMEHAESATRNAGLQGGNSWA 383 A+ M IG+ + G +++HA+ A A G N+ Sbjct: 524 TAALGRPYAVGGMGHHHSTPSIGLALFGGGTGDGAGVDDLLKHADLAMYQAKAAGRNTIR 583 Query: 384 IYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEE-V 442 +D S+ + + + L L+ +P V +G + E + R V Sbjct: 584 FFDPSMLQAVLARAALESELRLALESDELLLHYQPLVNGDGSMLGAEALVRWRHPQRGLV 643 Query: 443 SSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN------LAIQVTVESLIRPRFQR 496 E++P Q GL + + R L W LA+ V+V +P F Sbjct: 644 MPGEFIPAAEQGGLIVALGQWVLERACAQLVAWSRSAATAQLVLAVNVSVRQFRQPDFVD 703 Query: 497 WLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTS 556 L TL + +Q + + IEL E+ + + + + + A GV A++ G S + Sbjct: 704 QLLQTLRR-SGAQPRLLKIELTESLLMADVEDVIARMEQLRAHGVGFAIDDFGTGYSSLA 762 Query: 557 WIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQ 616 ++K L ++ LK+ VR++ + +V++++ +V A GV + + + L + Sbjct: 763 YLKRLPLDQLKIDQSFVRDVLTDPNDAAIVRTILALARSLDLEVVAEGVETTGQLKFLQR 822 Query: 617 RGVTGGQGDFFASSQPL 633 G QG F P Sbjct: 823 HGCKAFQGHLFGRPAPA 839 >UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Comamonadaceae RepID=A1WHK4_VEREI Length = 836 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 96/504 (19%), Positives = 187/504 (37%), Gaps = 21/504 (4%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 + A R + LE + R +V G + T + R+I ++ Sbjct: 330 WAAHRAVLAAQQPFRDLELQRRRADGSMHWISVSGVPVQGADGTPRGYRGVGRDITGRKQ 389 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + I A D TGL NR ++L + T G ++ I L +F L+D Sbjct: 390 ----AEGQIERLAFYDALTGLPNRRLLLDRLQHATVAVTRSNTQGALLFIDLDNFKSLND 445 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIA------ 325 T GH + L + +AR+ +F LL + A++ A Sbjct: 446 TLGHDAGDHLLQQAAQRLKACVREV--DTVARFGGDEFVVLLAGLSAAAAQASAEAAQVA 503 Query: 326 GQLIKAVDTLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAI 384 + ++ IGI + +++++ A+ A A G N+ Sbjct: 504 KHIAASLGQPYALGGAVHHSTPSIGIALFGPQACRVDELLKQADLAMYQAKAAGRNTQRF 563 Query: 385 YDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEEV-S 443 +D + + + L + L+ +P V +G++ E + R + Sbjct: 564 FDPEMQAAASHRSALEADLRRGLQQRELVLHYQPMVDGQGRLQGAEALVRWNHPQRGLMP 623 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE------NLAIQVTVESLIRPRFQRW 497 AE+ P+ Q GL + + L W +L++ V+V + F + Sbjct: 624 PAEFTPLAEQTGLILPLGQWVLETACAQLVAWSRSALTRAFSLSVNVSVRQFRQADFVQQ 683 Query: 498 LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 L TL + + +R+ IEL E+ + + + ++ + G+ A++ G S S Sbjct: 684 LLATL-EASGANPERLTIELTESLLLNDVQDIIARMQQLRCHGLGFALDDFGTGYSSLSQ 742 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 +K L ++ +K+ VR++ + +V+S++ V A GV +R++ + L Sbjct: 743 LKRLPLDQIKIDRSFVRDLPADAGDGAIVRSILALAQSLGLAVVAEGVETRAQLEFLQHH 802 Query: 618 GVTGGQGDFFASSQPLDTNVKKYS 641 G QG F P + ++ Sbjct: 803 GCQTFQGYHFGRPMPPEALAHRFQ 826 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats. Identities = 84/440 (19%), Positives = 167/440 (37%), Gaps = 12/440 (2%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 LL E + + I A D T L NR +L LE ++ + V+ Sbjct: 413 ALLEETTQRMNEQELNEQRIEYLAHYDTVTKLPNRFSLMARLGQALELAKRFSSRLAVIF 472 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK- 319 I L F ++D+ GH + F + L + ++AR +F +LP Sbjct: 473 IDLDRFKNINDSLGHHIGDRLLFQVAGRLQDTIR--SADIVARLGGDEFVVVLPLINSNI 530 Query: 320 EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQG 378 A ++ + + + + + IGI + G+ +++M++A+ A +A G Sbjct: 531 SAAHAVRKIQQTLSQGYTVESHELNITPSIGISVYPTDGETVQELMKNADLAMYHAKSAG 590 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFD 437 NS+ + + + + + + L R L+ +P + + G+V E + R Sbjct: 591 RNSYQFFTQEMNLTVQARLVLESDLRTALERDEMMLHYQPQIDLKSGEVVGVEALLRWRH 650 Query: 438 G-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIR 491 V+ ++P+ GL + L W + L A+ ++ + Sbjct: 651 PVRGAVAPDVFIPVAEDTGLILSIGEFALKSACEQLALWISQGLSPLRMAVNLSARQFKQ 710 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 L D L + +E+ E+ + +R + +GV +A++ G Sbjct: 711 SNLPSLLADILAAT-GVAAHLLELEITESSAMDDPNTAIVHLRTLREMGVELAIDDFGTG 769 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S S++K V LK+ VR I+ +E+ + + + +V A GV + ++ Sbjct: 770 YSSLSYLKLFPVNRLKIDRSFVRGIDTDSEDAEIAAATIALAHNLGKEVVAEGVETEAQC 829 Query: 612 QTLIQRGVTGGQGDFFASSQ 631 + L + QG FF+ Sbjct: 830 RFLRGQQCDILQGYFFSEPL 849 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats. Identities = 87/458 (18%), Positives = 180/458 (39%), Gaps = 16/458 (3%) Query: 193 PRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKV 252 P + L ++++I + Q R++ A D TGL NR +++ + + Sbjct: 239 PNHAIILRGIVQDITERKMQQGRIE----YLANHDALTGLPNRNLLSDRMEQAMSQARRT 294 Query: 253 GTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAAL 312 G VM++ L F ++D++GHS + + L + G +AR +F + Sbjct: 295 GQLVAVMVLDLDRFKHINDSFGHSVGDGLLRVVAARLKRSVR--DGDTVARLGGDEFVVM 352 Query: 313 LPH-RTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESA 370 L + T +A+ IA +++ D +G+ G + E +++ A++A Sbjct: 353 LVNLATQADADVIARKILDTFIEPFTLDEHDLHVTTSVGVSLCPTDGTNAETLLKTADAA 412 Query: 371 TRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHR 429 A G N + Y L + + Q ++ LY +P V + GQ+ Sbjct: 413 LYAAKEHGRNCYRFYTRELGARVEEQTILENALHQAVANHELELYYQPKVDLKTGQISGV 472 Query: 430 ELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQ 483 E + R + ++P+ GL + W E +A+ Sbjct: 473 EALIRWRRPGIGVIPPDRFIPIAEDCGLILPIGEWVLRTACMQAVAWRREGHPPIRIAVN 532 Query: 484 VTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRV 543 ++ + +R TL + + +EL E+ + Q + + +R + ALGV + Sbjct: 533 LSARQFRQQDVAAMVRTTLEET-GLAPDSLELELTESVLMQDCNAIAHTLRELKALGVVL 591 Query: 544 AVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYAT 603 +++ G S S++K+L ++++K+ + ++ E L +S++ + A Sbjct: 592 SLDDFGTGYSSLSYLKDLPIDVVKIDRSFLDDVTTSAEGASLTRSIIAMAESLHMETVAE 651 Query: 604 GVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 GV + ++ L + QG +F+ D S Sbjct: 652 GVETEAQLSFLNRHRCHAMQGYYFSHPVTGDEIADMLS 689 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 550 bits (1419), Expect = e-155, Method: Composition-based stats. Identities = 85/527 (16%), Positives = 203/527 (38%), Gaps = 17/527 (3%) Query: 117 MSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRIL 176 ++L +D N SL+ +I + + + + A Sbjct: 344 LALDQSTEDTCKNILKSLLPVFEFQEMAVAMIKLEDK-QYFTPKYQDNLSNCISSAIISH 402 Query: 177 NGERGSNVLGTIYEWPPRT---SSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLN 233 + G + I +P + +DT+ ++ E + I A D TGL Sbjct: 403 GQQCGLLQVAYIRNFPSTLTYQQNLVDTIAHDLGRWYEG-KEAEKRIIEMATHDALTGLP 461 Query: 234 NRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFM 293 NR +++ +L ++ V+ I L F ++D+ GH + + + L + + Sbjct: 462 NRYLLRDRIEQVLVHDTRLQRQMAVLFIDLDHFKTINDSLGHEIGDLLLKAVADRLKSCV 521 Query: 294 MRYPGALLARYHRSDFAALLPHRTLK-EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGIC 352 +AR +F +L +A +A +++ + + + IGI Sbjct: 522 RNE--DTVARQGGDEFIVVLNSIAESLDAAKVAQKILDSFALPFHIHKNELHIDGSIGIA 579 Query: 353 AWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGG 411 + G + E ++++++ A +A G N++ + D L + + L R Sbjct: 580 VFPDDGVNAETLLKNSDVAMYHAKKNGRNNYQFFTDELNKSAYERHILGLDLRYALERNE 639 Query: 412 PRLYQKPAVTR-EGQVHHRELMCRIFDGNE-EVSSAEYMPMVLQFGLSEEYDRLQISRLI 469 LY +P + ++ E + R + ++ +++ + + GL I + Sbjct: 640 LLLYYQPVMDMPSHNLYGVEALLRWRHPEQKLITPDKFINLAEETGLIIPIGEWVIRTVC 699 Query: 470 PLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQ 524 ++ W E+ +AI ++ + + L + + K I +E+ E+ + Sbjct: 700 LQIKAWQEQGFYVPRVAINLSARQFRDKDLIKNISRILSET-GVKAKHIALEITESMLID 758 Query: 525 HISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQL 584 +I ++ + ++A+G+ ++++ G S S++K+ + LK+ VR++ ++ Sbjct: 759 NIEKVVETLNRLDAMGLHISIDDFGTGYSSLSYLKQFPIHTLKIDRSFVRDLVTDKNDRT 818 Query: 585 LVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQ 631 +V +++ +V A G+ + L+ + QG +F+ Sbjct: 819 IVAAIIAMAHSLEMEVIAEGIEIEEQLDFLVTQKCNHYQGYYFSKPV 865 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 550 bits (1418), Expect = e-155, Method: Composition-based stats. Identities = 80/490 (16%), Positives = 186/490 (37%), Gaps = 19/490 (3%) Query: 164 GQELLETRATRILNGE-RGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRS 222 G+E E E R + + + + R++ + + L+ + Sbjct: 296 GKEAREIHEHLRAGHEKRTYEIKASPLYNEDHSIRGIIETSRDLTDILNSEAELNEKTQH 355 Query: 223 YAA---QDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 D T L N+ F ++L + ++ I L F ++D+ GH + Sbjct: 356 LQFVTTHDQLTHLPNKELFFDRLERATFKTHRSPFFTALLFIDLDRFKHINDSLGHEIGD 415 Query: 280 EQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNN 338 + + LST + + LAR +F ++ L ++A I + Sbjct: 416 QLLQEVAKRLSTSIRKT--DTLARMGGDEFLIIIEDIKELSHVSTVAKNFIDTILPSFTI 473 Query: 339 KMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNV 397 + +GI Q ++++ AE A A GGN Y + + + + Sbjct: 474 DGHELFITPSMGISIAPTDTQHPKELLAFAEIAMYQAKGLGGNKCQFYTAEMNSRAKTRI 533 Query: 398 RWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFG 455 + + + +++ LY +P + G++ E + R +S +++P+ + G Sbjct: 534 ELESYLRKAVNQDQFVLYYQPQFDIQSGELVGCEALLRWQHPQMGMISPNDFIPLAEETG 593 Query: 456 LSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQR 510 + E + + W + +A+ ++ P F + + ++Q + Sbjct: 594 VIIEIGEWVLQEACLQNKKWQDAGHSPIRVAVNISPRQFREPGFLEMI-ERVVQTTGIKP 652 Query: 511 KRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHP 570 + + +E+ E+ + I +++ + A G+ +A++ G S S++K + LK+ Sbjct: 653 EWLELEITESLLMDDIDSAINILKQLKAKGIHLAIDDFGTGYSSLSYLKRFPLSRLKIDR 712 Query: 571 GLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASS 630 VR+I + + ++++ + +V A G+ ++ + L ++G GQG ++ Sbjct: 713 SFVRDITTDDNDASITKAVIALAHSMNLKVVAEGIETQEQLLFLKEKGCEVGQGYLYSPP 772 Query: 631 Q---PLDTNV 637 P D Sbjct: 773 VAKEPFDHFF 782 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 550 bits (1418), Expect = e-155, Method: Composition-based stats. Identities = 81/451 (17%), Positives = 181/451 (40%), Gaps = 16/451 (3%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 + +I + SRL+ L+ +D TGL NR L ++ E+ ++ + Sbjct: 535 VFADISEIKHSQSRLNELV----NRDPLTGLPNRRLMHELLDHAIKYAEREQNEIALLFV 590 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKE 320 L F ++DT GH ++ F ++ + + +AR +F ++ R ++ Sbjct: 591 DLDRFKAINDTLGHQMGDKLLFEVSQRIRAAVR--DSDAVARLGGDEFIVMMDVLRERED 648 Query: 321 AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGG 379 A +A ++I ++ + +GI + D + +++ A+ A +G Sbjct: 649 AAKVAKKIISSLQNEFLIDGRELFISASVGISVYPDDSLDVDGLIKAADIAMYQVKNKGK 708 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDG 438 N+ Y L + + + L+R +Y + V+ G++ E + R Sbjct: 709 NNHCFYSADLSQNAVERFTLENQLRRALARDQFEVYYQAQVSLETGRIIGAESLIRWIHP 768 Query: 439 N-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRP 492 VS A+++P+ + GL + + ++ W ++ +++ V+ + R Sbjct: 769 ELGVVSPAKFIPLAEETGLIIPIGEWVLRQSAMQVKEWHDQGFDIDWVSVNVSGVQIQRS 828 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 F + L++ + + + +E+ E+ V + + V + LGVR+A++ G Sbjct: 829 NFADTVYGILVETD-CESHLLELEITESTVMHNTEYVIDVFDRIKHLGVRLAIDDFGTGY 887 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S S +K L ++ +K+ VR++ +++ + ++ V A GV +R + Sbjct: 888 SSLSHLKRLPLDKIKIDQSFVRDLPNNSDDAAIATAINAMAQSLGFTVIAEGVETRQQAS 947 Query: 613 TLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 L + G GQG ++ Sbjct: 948 FLKKIGCQQGQGYLYSRPVTASEFTALLRAE 978 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 550 bits (1418), Expect = e-155, Method: Composition-based stats. Identities = 84/453 (18%), Positives = 181/453 (39%), Gaps = 16/453 (3%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 + ++ +E + + + D T L NRL F ++L L + G+ V+++ Sbjct: 266 VFTDLTRIKES----EENLLYLSGHDALTELPNRLLFHDRLNQTLVESADSGSIVAVLIV 321 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL-KE 320 L F +++D+ GH + + L A LAR +F +LP+ T ++ Sbjct: 322 DLDRFKVINDSMGHEVGDSLLCEVATRLRAIC--PAKATLARLGGDEFGIVLPNMTQNRD 379 Query: 321 AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGG 379 A +A +++ V ++ IG+ + G+ +M +AESA +A G Sbjct: 380 AALLAQEVLTRVAQPITISEVEFAVGASIGMTVYPLDGEKPSVLMRNAESAMYHAKQSGR 439 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG 438 N++ Y L + + + + R L+ +P + G++ E + R Sbjct: 440 NNFQFYRSELNTASLARILLESGLRNAVDRQEFLLFYQPQMELATGKLIGMEALIRWQHP 499 Query: 439 -NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE-----NLAIQVTVESLIRP 492 VS E++P+ + GL + + + W ++ +++ ++ P Sbjct: 500 EQGMVSPGEFIPLAEETGLVIPMGQWALKEACRQSKVWMDQTGVPLRISVNLSGIQFRLP 559 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 F + T+ + + +EL E+ + + +++ GV +A++ G Sbjct: 560 DFTEMVMRTVGE-SGLPPHCLELELTESIAMGDVEETLEKLTILSRFGVLLAIDDFGTGF 618 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S S++K+ ++ LK+ VRN + E+ ++++ + + +V A GV + + Sbjct: 619 SSLSYLKKFPIDTLKIDQSFVRNCTRDPEDAAIIRAFINLAHSLNLEVIAEGVEHLEQLE 678 Query: 613 TLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYS 645 L Q QG F+ D ++ Sbjct: 679 FLAQESCDEIQGYFYGRPLSGDKFEMFMLDAFA 711 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 550 bits (1417), Expect = e-155, Method: Composition-based stats. Identities = 90/448 (20%), Positives = 174/448 (38%), Gaps = 15/448 (3%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 TL R+I RE R I+ A D T L NR+ + + ++ G ++ Sbjct: 537 TLFRDISLQREAQER----IQRLAHFDPLTDLPNRVLLAERTQRQIAQEQARGGQLALLF 592 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE 320 + L F ++D+ GH + + L + + P ++R +F LLP + Sbjct: 593 LDLDHFKNVNDSLGHRIGDILLVAVARRLQSLIG--PQDTVSRLGGDEFLLLLPATSAAH 650 Query: 321 AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGG 379 A +A L+ AV + + +GI G+ + + + A++A +A G Sbjct: 651 AAKVASALLTAVAQPFQIDPYELSTTLSVGIAMCPADGESFDTLYQRADAAMYSAKQSGR 710 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDG 438 N + + L + ++ + + L R L+ +P V+ GQV E + R Sbjct: 711 NRYGFFTADLQARTARALQIENALRRALERQQFELHYQPQVSLGTGQVVGAEALLRWHHP 770 Query: 439 N-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRP 492 V+ AE++P+ G + + W + L ++ ++ P Sbjct: 771 ELGVVAPAEFIPVAENSGQIVALGEWVLHTAARDAKRWLDMQLPLRAVSVNLSAVQFRHP 830 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 + + L Q +R+ +EL E ++ ++ GVR++++ G Sbjct: 831 QLPEMVTRCLQQA-GLPARRLELELTEGAAVDDPVAALAMMDQLHDRGVRLSMDDFGTGY 889 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S S +K + LK+ VR+++ ++ +V +++ Q A GV + + Q Sbjct: 890 SSLSCLKRFQIYKLKIDQSFVRDLDDDANDRAIVSAIIRMAQALGMQTTAEGVETDGQLQ 949 Query: 613 TLIQRGVTGGQGDFFASSQPLDTNVKKY 640 L +G GQG F+ P D Sbjct: 950 FLRAQGCDEGQGYLFSRPLPADAFEAYL 977 >UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY96_DESAC Length = 904 Score = 550 bits (1417), Expect = e-155, Method: Composition-based stats. Identities = 78/450 (17%), Positives = 181/450 (40%), Gaps = 17/450 (3%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 + +I + R + ++ A D T L NR F ++L+ + + T V+ Sbjct: 461 AIFHDISEIK----RSEEKLQHQAYHDALTNLPNRKLFHDRLSVAVAHARQHKTKLAVIY 516 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLK 319 + + +F ++D+ GH ++ ++ L + + AR +F L+P Sbjct: 517 LDIDNFKYINDSLGHHYGDKLLQQISERLLSCTRQE--DTTARLGGDEFIILMPEIEDPH 574 Query: 320 EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDT-EQVMEHAESATRNAGLQG 378 + + +++K ++ D + +G+ + DT E ++++A+ A A G Sbjct: 575 DITVLCRRILKQLELPHALSGRDYTVNVSMGVTVFPDDADTPEDLIKNADIAMYRAKEAG 634 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQ-VHHRELMCRIFD 437 N + ++ ++ + + + L R L+ +P V E + V E + R Sbjct: 635 KNGYQLFTAAMQQTIMQRIELEARLSDALCRNEFVLFYQPQVDLESEHVIGAEALIRWQK 694 Query: 438 GNE-EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE-----NLAIQVTVESLI- 490 + V E++P+ + GL + D + W E+ +++ ++ E Sbjct: 695 PDGQLVYPDEFIPIAEECGLITQIDHWVLKAACRQANKWREQSGRNFKMSVNLSSEQFAK 754 Query: 491 RPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGL 550 + +++ L + + + +E+ E V ++ + ALGV +A++ G Sbjct: 755 DQELVQRVKNVLNKT-GLPAECLTLEVTENAVMSDTESAIAIMTQLTALGVSIAIDDFGT 813 Query: 551 TLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSE 610 S S++K LK+ V++I +++ + S++ + +V A GV +++ Sbjct: 814 GYSSLSYVKNFPARYLKIDRSFVKDIPGDSDDMAIAASIISLGRNLNMEVIAEGVEEQTQ 873 Query: 611 WQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 L Q QG F+ + +++ Sbjct: 874 IDFLKQHRCQQVQGYFYGKPCAAEFFSQQF 903 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 550 bits (1417), Expect = e-155, Method: Composition-based stats. Identities = 83/453 (18%), Positives = 194/453 (42%), Gaps = 17/453 (3%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 ++ +I ++ +RL+ A D TGL NR +L + L+ T ++M Sbjct: 634 SIYTDISQLKDSEARLE----HMALHDPLTGLPNRAMLGQKLDSALQHAMLNSTRVALLM 689 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLK 319 + L F ++D++GH +E ++ L + ++ R +F LL + + Sbjct: 690 LDLDHFKNVNDSFGHHFGDELLHQVSARLKQQLRE--SDVVCRLGGDEFTVLLQNNPSPD 747 Query: 320 EAESIAGQLIKAVDTLPN-NKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQ 377 + +A ++I A+ + + IGI + G E++M+ A++A A Sbjct: 748 DVSLLAERIIHALHQPFLLSNAREVMIGTSIGISLYPEHGSTAEELMQQADTAMYRAKHD 807 Query: 378 GGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIF 436 G + + + + L K + + + + ++ +++ +P ++ + Q+ E + R Sbjct: 808 GRDGYRYFSEELFLKAKARLELEQRLHRAITGQEFKVFYQPQISIKTNQIIGAEALLRWD 867 Query: 437 DGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE-----NLAIQVTVESLI 490 D + +E++ + + GL + + R W ++ NLA+ ++ L Sbjct: 868 DPEYGLIPPSEFISVAEETGLIQNIGEWVLYETCRQGRDWLDQHLPPINLAVNLSPLQLH 927 Query: 491 RPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGL 550 R L T++ + +EL E+ + + +++ + G+R+A++ G Sbjct: 928 HGD-VRQLIGTILHNSGFPAHHLELELTESALMEQQEETVKILQGLRQQGIRIAIDDFGT 986 Query: 551 TLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSE 610 S +++K+ +++LK+ V +I ++ + ++V V A GV ++++ Sbjct: 987 GYSSLAYLKQFPLDVLKIDKRFVEDIPHERDDMEIAATIVAMGHSLRLTVLAEGVETKAQ 1046 Query: 611 WQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 + L Q+G QG ++ P + + SQ+ Sbjct: 1047 LEFLEQQGCDYYQGYLYSMPLPAEEFAQLLSQQ 1079 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 550 bits (1417), Expect = e-155, Method: Composition-based stats. Identities = 76/445 (17%), Positives = 173/445 (38%), Gaps = 16/445 (3%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 +L +I Q + + ++ A D TGL NR ++ + ++ V+ I Sbjct: 602 VLTDIS----QRKQAEERLQFLATHDGLTGLPNRTLLQERMELAVLRAQRYQQCVGVLFI 657 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE- 320 L F +++DT GH + + L + + +AR +F L+ ++ Sbjct: 658 DLDRFKIINDTLGHQAGDVLLQEVAGRLGECLRQT--DTIARQGGDEFVVLVEDFIEQQY 715 Query: 321 AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGG 379 ++A +++ A+ + IGI + G D ++++A+ A A G Sbjct: 716 LVNVARKIMHALAQPFILMQQELYISASIGISVYPDDGVDISSLLKNADMAMYRAKDDGK 775 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG 438 N++ Y + + + L R L + + E + E + R Sbjct: 776 NTFHFYSADGNANSVSRLTLENSLRRALERNEFSLLYQAKLDLAEQNIIGAEALIRWHSA 835 Query: 439 N-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE-----NLAIQVTVESLIRP 492 VS +++P+ + G+ E + + +W E + + ++ Sbjct: 836 ELGMVSPQDFIPVAEETGMIIEIGEWVLQQACRDACHWQEVAGRPIRVGVNISARQFRED 895 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 + + + L + + +E+ E+ + Q+ R +++ LG V ++ G Sbjct: 896 SLYQAISNALEE-SGLTPNCLELEITESMIMQNAERASQMLQHFRNLGSYVLIDDFGTGY 954 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S ++K ++ LK+ VR+I + +++ + Q+++ V A GV ++++ + Sbjct: 955 SSLGYLKHFPIDSLKIDRSFVRDIPQDSDDMAITQAIIAMAHSLKINVVAEGVETQAQLE 1014 Query: 613 TLIQRGVTGGQGDFFASSQPLDTNV 637 L +G QG F+ ++ V Sbjct: 1015 FLRGQGCDQLQGYIFSRPLVVEDFV 1039 >UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC Length = 1499 Score = 549 bits (1416), Expect = e-155, Method: Composition-based stats. Identities = 82/447 (18%), Positives = 178/447 (39%), Gaps = 13/447 (2%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 ++LR+ SR + I A DV T L NR F QL L+ G V+ Sbjct: 1031 SVLRKRVARLLDASRAEKDIHQLAYHDVLTSLPNRTLFHKQLGELMNRSHLRGEQFAVLF 1090 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLK 319 + L F +++DT GH + + + + ++AR +F +L + + Sbjct: 1091 LDLDRFKLVNDTLGHEVGDLLLKAAADRIVGCLR--SNDMVARLGGDEFTVILEKIESPR 1148 Query: 320 EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQG 378 A +A ++ + + + IGI + G+D +++HA++A A QG Sbjct: 1149 VAAEVAAKICSVLSKVFAFSGQEMYISTSIGISLYPGDGEDVSTLVKHADTAMFRAKEQG 1208 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFD 437 NS+ Y+ + + + + L + LY +P + G++ E + R Sbjct: 1209 -NSYQFYEKGMETAAVKRLGLEAELRRALEQNELALYYQPQINLGTGEIATLETLIRWHH 1267 Query: 438 GN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIR 491 + +E++P+ + GL + ++ W + +A+ V+ L R Sbjct: 1268 PEHGLIPPSEFIPLAEETGLIASIGAWILREACTQMQSWLQRGFGPFHIAVNVSGRELER 1327 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 + L + K + +E+ E+ V + P R + +G++ A++ G Sbjct: 1328 EDLVDKIVTILKET-GLPPKWLELEITESVVMKGAGAAIPKFRRLREMGIKFAIDDFGTG 1386 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S +++K V++LK+ + ++ ++ +++ ++ +V A GV ++++ Sbjct: 1387 YSSLNYLKSFPVDILKIDRCFIHDVVSNPDDAAIIKGIIALAHSLRLKVVAEGVETQAQE 1446 Query: 612 QTLIQRGVTGGQGDFFASSQPLDTNVK 638 + L QG + + + Sbjct: 1447 EFLKAHQCDRFQGFYLSEPLSAAEIEQ 1473 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 549 bits (1416), Expect = e-155, Method: Composition-based stats. Identities = 84/444 (18%), Positives = 177/444 (39%), Gaps = 18/444 (4%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 + R+I +E RL A+ D TGL NR F ++L L + ++ + Sbjct: 390 ISRDITLRKEAEERLS----YQASHDALTGLPNRARFHDRLTHALARAGRDRHEFAILFL 445 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKE 320 L F +++DT GH+ + +T L LAR+ +F LL R ++ Sbjct: 446 DLDRFKVINDTLGHTVGDFLLQGVTKRLLGGTRE--SDTLARWGGDEFIILLESIRGAED 503 Query: 321 AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGG 379 A A +++ + + + + IGI + G+D + ++ A+ A A G Sbjct: 504 AAVAARRILDVLAEPFSVQGHEVFVSGSIGISVYPRDGEDVQALLRCADIAMYRAKDSGK 563 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG 438 N + Y+ ++ G ++ + L R L+ +P V G + E + R Sbjct: 564 NDYQFYESTMSTGGLERLKLEGDLRYALKRNEFVLHYQPRVNINTGLIVGAEALIRWDLP 623 Query: 439 NEEVS-SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRP 492 + + +++P+ + G + R W + + ++ ++ + Sbjct: 624 DRGLLWPLDFIPLAEESGFIIPIGEWVLRTACLQCRKWQDAGVPHPRVSVNLSTHQFKKD 683 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 + L + + +E+ E+ + +++ + ++ + LGV VA++ G Sbjct: 684 NLTSTVDRILKET-GLSPGLLELEITESAMMENLEKAVATLQGLAELGVNVAIDDFGTGY 742 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S ++K + LK+ VR+I ++ + S++ + +V A GV ++ + Sbjct: 743 SSLGYLKRFPIGALKIDQSFVRHIPSNIDDTAIAMSIISLGKTLNLKVVAEGVETQEQLT 802 Query: 613 TLIQRGVTGGQGDFFASSQPLDTN 636 L QG F+ QP+D + Sbjct: 803 VLRNYQCDEAQGYLFS--QPVDAD 824 >UniRef50_Q2SG37 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SG37_HAHCH Length = 841 Score = 549 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 83/451 (18%), Positives = 178/451 (39%), Gaps = 16/451 (3%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 +LR+I R R + I A D TGL NR F +++ + + + ++ I Sbjct: 260 VLRDITERR----RQEAAIEFQATHDALTGLPNRSLFLDRVTQSINHARRNESRLALIFI 315 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKE 320 L F +++DT GH+ ++ ++ L LAR+ +F L+ + + + Sbjct: 316 DLDKFKLINDTLGHNAGDDLLRIMSKRLQECTRNC--DTLARFGGDEFVLLVDNLESEAD 373 Query: 321 AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGG 379 +A +LI +V +GI ++ G + E +M HA+ A A G Sbjct: 374 LTHLAARLISSVSAPVLLLGQSHSITCSLGISSFPEDGDNVEVLMRHADIAMYRAKESGR 433 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDG 438 NS+ + + ++ ++ + ++Q L L+ +P V G++ E + R Sbjct: 434 NSYQFFTHQMQDRLNERLKLESSLKQALENDEFVLHYQPQVDLSTGKIIGLEALIRWQSP 493 Query: 439 N-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRP 492 V +++P + L I + L+ W + L AI ++ + Sbjct: 494 TLGLVPPGDFIPAAEEGRLISAIGEWVIFAVCKRLQSWRRQGLKIVPVAINISALQFMEQ 553 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 + + ++ L + + K + +EL E+ +++ + +GV ++++ G Sbjct: 554 KTEELVKQALNEY-MVEPKYLELELTESLSMLDPVTSISLMQRLKDIGVSLSIDDFGTGY 612 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 + S++K V LK+ V + ++ +V++++ + A G + + Sbjct: 613 SNLSYLKRFPVNKLKIDKSFVSGLTNNPDDYSIVKAIIRMSQSLGLKTIAEGAETAGQIA 672 Query: 613 TLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 L QG +F+ P +R Sbjct: 673 LLAAENCDAIQGFYFSRPLPEAEICAMLKER 703 >UniRef50_A1AMG1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AMG1_PELPD Length = 718 Score = 548 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 103/586 (17%), Positives = 222/586 (37%), Gaps = 35/586 (5%) Query: 87 YTLARNGSYRPVGSSDLFRELSVPLIK------HPGMSLRLVYQDPMGNYFHSLMTTAPL 140 Y + ++R + +S+ + L + +P + + + + + + + Sbjct: 123 YIFRSSRAFRDLRTSEARLSKAQQLARMGSWEWNPLLDVVQLSEPCRQ--IMGIDSATQV 180 Query: 141 TGAIGFIIVMLFLAVRWLQRQL-----AGQELLETRATRILNGERGSNVLGTIYEWPPRT 195 I + L +L++ L G+ L T + E + E R Sbjct: 181 RDIASLIALAHPLGRPYLRKGLDALMERGRPLSLDCQTATADEEDKRFIHLEAEEH--RD 238 Query: 196 SSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTH 255 +S TL+ + IR A D TGL NR+ F L L E+ Sbjct: 239 ASGRITLVSGTIQDITSRKLAEEKIRYLAYYDSLTGLPNRVLFKEHLRRALATSEQHKRQ 298 Query: 256 GIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYP----------GALLARYH 305 +M++ L F ++D+ GH + + + L + Y +L+AR Sbjct: 299 LAIMLLDLDRFKGINDSLGHDAGDLLLQQVADRLRLRVRPYDTVSRDSEEQRDSLIARLG 358 Query: 306 RSDFAALLPHRTLKEAES-IAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQV 363 +F LL T EA + +A ++I+A++ + IGI + G D E + Sbjct: 359 GDEFTILLEGITTPEAAARVARRVIEALEAPFALNGNEVFISCSIGISIYPHDGTDLEIL 418 Query: 364 MEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR- 422 +++A+ A A G +++ Y + + T + + + L+ +P + Sbjct: 419 VKNADVAMYCAKDLGCSTFQFYTQEMNSVSLQRLILETHLRKAFEKEEFFLHYQPQIDCV 478 Query: 423 EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL- 480 ++ E + R + VS ++P+ + GL DR ++ + L W + Sbjct: 479 TNRIIGLEALARWNNPELGLVSPGSFIPLAEETGLIIALDRWVLATVCKQLEAWQAAGIP 538 Query: 481 ----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLV 536 A+ ++ ++ + ++ + + R + +E+ E + ++ + V+ ++ Sbjct: 539 LVRVAVNLSARHFLKANLNKTIQQ-IRSRGAAARDHLDLEITEGMLMENAEEVVSVLGML 597 Query: 537 NALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGT 596 GV ++++ G S S++ L LK+ + E+ +V +++ Sbjct: 598 QETGVNISIDDFGTGYSSLSYLTRLPFHTLKIDRSFISQSGDNVESASVVTAIIALAHSL 657 Query: 597 STQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 +V A GV + ++ Q L + G QG F+ P D + + Sbjct: 658 GKEVVAEGVETSTQLQFLKENGCRVIQGYLFSRPLPEDKIRELLRE 703 >UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=B1XZW3_LEPCP Length = 1069 Score = 548 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 98/495 (19%), Positives = 187/495 (37%), Gaps = 17/495 (3%) Query: 159 QRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDT 218 + Q G E R R G+ + +L S +I + +E R Sbjct: 564 RVQTRGSWQGEVRICRRAGGDYPAWLLANAVRDRAGHVSHWVCTSIDITDRKESERR--- 620 Query: 219 LIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQV 278 IR A DV T L NR +L L+ + G V+ I L F ++D+ GH Sbjct: 621 -IRFLAEHDVLTELPNRALCIERLRLALQQARRTGQKVAVLFIDLDRFKNINDSLGHHVG 679 Query: 279 EEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQ-LIKAVDTLP 336 + ++ L + G ++R +F +L ++E + Q LI V Sbjct: 680 DGLLRSVAQRLVDGVR--AGDTVSRLGGDEFVVVLNGLADIEEVAHVVEQRLIPRVRQPH 737 Query: 337 NNKMLDRDDMIHIGICAWRSG-QDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRG 395 + + +GI + QD +++M A+ A A QG N + + ++ + Sbjct: 738 GVQGAEIHVSCSVGISVFPDDAQDIDELMRQADVAMYQAKAQGRNGAQFFTAEMNQRAQA 797 Query: 396 NVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQ 453 + + +++G L+ +P + +G+V E + R V ++P+ + Sbjct: 798 RLMVENHLRSAVAQGQLSLHYQPRIHVADGRVAGVEGLLRWHSPELGHVPPDRFIPVAEE 857 Query: 454 FGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKS 508 GL E I + W + L +I ++ L P LR +L + Sbjct: 858 TGLIIEIGAWVIEAACAQIERWRGQGLQEVAVSINLSALQLRDPGLLDVLRASLER-HAV 916 Query: 509 QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKL 568 ++ +EL E+ + + + + LG+R++++ G S +++ ++ LK+ Sbjct: 917 PPGQLELELTESILMDQVDAHLVTLHALRELGLRLSIDDFGTGYSSLNYLTRFPIDQLKI 976 Query: 569 HPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFA 628 VR++ + ++++++ +V A GV E Q L G QG FA Sbjct: 977 DRSFVRDMLDDPRDLAIIKAIIGLGHTLGLKVVAEGVERELEVQALRAAGCDELQGYHFA 1036 Query: 629 SSQPLDTNVKKYSQR 643 DT Sbjct: 1037 RPMAADTATAWLLDW 1051 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 86/493 (17%), Positives = 195/493 (39%), Gaps = 13/493 (2%) Query: 160 RQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTL 219 R+L +E+ + +++ + + T ++ ++ I + E R + Sbjct: 179 RKLLANGGVESYDSTMIHTDGSIRDIIFSKTVFGNTDGSIGGIVGTILDITE-RKRAEEA 237 Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 I+ A D TGL NR ++++ LL + G V+ + + F ++D+ GH+ + Sbjct: 238 IQQLAYFDALTGLPNRTLLRDRVSQLLSQARREGGGFGVLHLDVDRFKGVNDSLGHACGD 297 Query: 280 EQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIKAVDTLPNN 338 T+ +++ + +AR +F +LP ++ ++ ++++ ++ Sbjct: 298 VLLSTVAGRIASSIRE--SDTVARLGSDEFVVILPGVGHEEDVVAVVRKIVEELNRPIVI 355 Query: 339 KMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNV 397 + D IGI + G + ++++A+ A A GG+ + Y L + + Sbjct: 356 QGNDIFCTASIGIAIYPTDGSSADILLKNADMAMHKAKEFGGDGYQFYSSELNHRAMERL 415 Query: 398 RWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFG 455 T + + L R L+ +P + G++ E + R VS A ++P+ + G Sbjct: 416 TLETSLRRALERREFLLHYQPLLGIGSGRIVGVEALLRWDSPELGMVSPARFIPLAEETG 475 Query: 456 LSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQR 510 L + LR E +++ V+ F ++ Sbjct: 476 LIVPIGEWVLRSACEQLRALHELGYTELCVSVNVSARQFRHDGFCAM-VAAVLAAVGLDP 534 Query: 511 KRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHP 570 + + +EL E+ + + + ++R + +GV +A++ G S S++K ++ LK+ Sbjct: 535 RYLELELTESVIMERSETAKGILRKLKQMGVSLAIDDFGTGYSSLSYLKHFPIDRLKIDR 594 Query: 571 GLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASS 630 V+ + +N + +++V + V A GV + + L QG A Sbjct: 595 TFVKEVTVDQDNAAIAEAIVALAHVLNLDVVAEGVETAEQLAFLAALRCDVVQGYHIARP 654 Query: 631 QPLDTNVKKYSQR 643 P ++ R Sbjct: 655 LPPRNLLEFLEAR 667 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 78/439 (17%), Positives = 167/439 (38%), Gaps = 16/439 (3%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 L+ ++ Q + IR A D TGL NR ++L +L + T +++ + Sbjct: 283 LMEDVT----QRKVNEEQIRRLAYYDNLTGLPNRALLMDRLEQMLTKARRDKTRVVLLFL 338 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLP-HRTLKE 320 L F +++DT GH+ ++ + N L + LAR +F L Sbjct: 339 DLDRFKVINDTMGHAHGDQLLVQVANRLRQALR--SSDTLARIGGDEFVVLFTLEGPQLN 396 Query: 321 AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGG 379 +A LI ++ ++ D IGI + G D ++ A+ A A GG Sbjct: 397 VSPLAQHLIDSITSVYPISGRDVYASTSIGIATFPDDGGDCNSLLRCADMAMYAAKEGGG 456 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG 438 + Y + K + T + L R L +P V R+G++ E + R D Sbjct: 457 KGYHFYSPEMNLKAHARMEMETNLRHALEREEFFLEFQPIVNARDGRLVGAEALLRWSDP 516 Query: 439 N-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRP 492 + ++ + + G + ++ W E L ++ V+ + Sbjct: 517 EKGLIMPDMFIQVAEESGFIVPLGEWVLRTACRKMKDWREAGLPPFRISVNVSGRQFCQA 576 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 F + + + + +E+ E + + + + L + + ++ G Sbjct: 577 NFTDTVCSIIRET-GMDPSFLALEMTETSLMVDVEATAKALMQLKELDISIVIDDFGAGY 635 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S ++++ ++ +K+ +R++ ++ +V++++ + QV A GV + + Sbjct: 636 SSLGYLQKFPIDRIKIDRSFIRDLSSHANDKAIVEAIIAMAARLKLQVVAEGVETSEQLD 695 Query: 613 TLIQRGVTGGQGDFFASSQ 631 L ++G QG +F Sbjct: 696 FLKEQGCHEIQGFYFHRPL 714 >UniRef50_B3PC21 Sensory box protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PC21_CELJU Length = 1306 Score = 548 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 93/462 (20%), Positives = 185/462 (40%), Gaps = 19/462 (4%) Query: 192 PPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEK 251 P+ S L I + S + I A D T L NR ++L ++ + Sbjct: 834 SPQVRSLLLIFAERISGELNRASDQEQ-IYRLAFFDPLTRLPNRRMLMDRLRLIIAQSAR 892 Query: 252 VGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAA 311 G ++ I L F +L+DT GH ++ + +S+ + L AR +F Sbjct: 893 TSQQGALLFIDLDHFKLLNDTRGHHIGDQLLVQVAERISSIIR--TTDLAARLGGDEFVV 950 Query: 312 LL------PHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSG-QDTEQVM 364 + P + EA+ A QL + ++ + I IG+ + + + ++ Sbjct: 951 VFDNLGTDPDKAALEAKHRAEQLHELINLPYPLQQSVYHCTISIGVNLFNANNTSIDDLL 1010 Query: 365 EHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRG-GPRLYQKPAVTRE 423 HA+ A A G N+ +D + + + G Y + V Sbjct: 1011 RHADVAMYQAKDGGRNTIRFFDPHMQSRLEKRAEIEADLRSAHESGTQLTPYYQAQVNHT 1070 Query: 424 GQVHHRELMCRIFDGNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE---- 478 G+V EL+ R + ++ +++P+ Q GL R I L+ W ++ Sbjct: 1071 GEVLGAELLLRWIHPRKGTIAPGDFIPVAEQTGLIVAIGRQVIRMACKQLQCWQQQPGFG 1130 Query: 479 --NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLV 536 LA+ V+ + F + ++ + + +EL E+ + +++ ++ + Sbjct: 1131 HLTLAVNVSPIQFNQSSFVEDVISCVLDYD-VNPNHLKLELTESSLLKNVEHSIEKMQRL 1189 Query: 537 NALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGT 596 G+ A++ G+ S S++K+L ++ LK+ VR+I + ++V++++ + Sbjct: 1190 QEFGISFAMDDFGIGYSSLSYLKKLPLDQLKIDRTFVRDITIDPNDAIIVRTIIAMAANM 1249 Query: 597 STQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVK 638 + V A GV + + Q L Q G QG +F PLD + Sbjct: 1250 NLNVIAEGVETELQKQFLEQNGCLLFQGYYFGKPMPLDAFEE 1291 >UniRef50_Q0AAU4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU4_ALHEH Length = 723 Score = 548 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 91/440 (20%), Positives = 183/440 (41%), Gaps = 15/440 (3%) Query: 200 DTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVM 259 + R++ + + ++++ A D+ TGL NR ++LA L + V+ Sbjct: 270 YGIARDVTDRK----HAESIVHYQAHHDLLTGLPNRALLKDRLAQALARARRGNEEVAVL 325 Query: 260 MIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TL 318 + L F +++D+ GHS ++ + L + G LAR +F LLP Sbjct: 326 FLDLDRFKVVNDSLGHSVGDQLLQQVAQRLRACLRE--GDTLARLGGDEFTLLLPAIPDR 383 Query: 319 KEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQ 377 E +A + I A++ + IGI + G+ E +++HA+ A + Sbjct: 384 PAVERVAQKCIDALEQPFMVHNHRLFLGVSIGIALFPEHGETLETLIKHADVAMYHVKEH 443 Query: 378 GGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIF 436 G + +D ++ + ++ T + + L + R+ +P V G+V E + R Sbjct: 444 GKGHYTFFDQAMGSRIDHHLNMETGLRRALEQHEFRVAYQPQVDVVSGRVTGMEALIRWQ 503 Query: 437 DGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPE----ENLAIQVTVESLIR 491 EVS E++P+ Q GL + L WP+ LA+ ++ + + Sbjct: 504 HPETGEVSPREFIPVAEQTGLILPIGEWLLRSACEELLRWPDGNEGLRLAVNLSPLQVHQ 563 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 F +R + +R+ +E+ E + + + + +R ++ LGV + ++ G Sbjct: 564 RDFVDRVR-AICDETGFPLRRLDLEITENLLMRDVESVVEKLRTLSRLGVTITIDDFGTG 622 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S +++ L + LK+ V I + E LV++++ G V A GV ++ + Sbjct: 623 YSSLGYLQRLPIHALKIDQSFVHAIRENEEKGTLVETIIAMAHGLGLNVVAEGVETKRQL 682 Query: 612 QTLIQRGVTGGQGDFFASSQ 631 L + QG +F+ Sbjct: 683 DYLRRLQCGRMQGFYFSYPL 702 >UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM39_THASP Length = 920 Score = 548 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 109/508 (21%), Positives = 197/508 (38%), Gaps = 31/508 (6%) Query: 156 RWLQRQLAGQELLETRATRILNGER-----------GSNVLGTIYEWPPRTSSALDTLLR 204 R L L + E +L GE GS L P + + T Sbjct: 408 RILNGGLTPRATYEQMWATLLAGEVWRGEFHNVRKDGSAYLELATIAPIKDAGGTVTHYV 467 Query: 205 EIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLP 264 ++ Q + + L+ A D TGL NR +++A + + + G++M++ + Sbjct: 468 AVKEDITQRKQSEALLHRLAYFDALTGLPNRALLHDRIAQAIRSGVRRESFGMLMLVDID 527 Query: 265 DFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA--- 321 F L+DT GH+ + + L + +AR+ DFA L+ EA Sbjct: 528 RFRQLNDTLGHAAGDRLLCEVAARLRASVREE--DTVARHGDDDFAVLVERIGETEADAL 585 Query: 322 ---ESIAGQLIKAVDTLPNNKMLDRD---DMIHIGICAWRSG-QDTEQVMEHAESATRNA 374 E +A +L +A+ + D + GI + G E +++ AE A A Sbjct: 586 SHAEHVARKLQRALQQPYVLGGTEGDRHFATLSFGISLFHDGVSSLESLLKQAEVALYRA 645 Query: 375 GLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCR 434 G + ++ + + R + + L RL+ +P V R G V E + R Sbjct: 646 KQDGRDIVRFFNPEMQAVVDAHARLEARMHEALEANAFRLFFQPQVNRRGVVIGAEALLR 705 Query: 435 I-FDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP------EENLAIQVTVE 487 DG VS AE++P+ G + L W +A+ V+ Sbjct: 706 WPLDGGAMVSPAEFIPLAEDTGHIVRLGLWVLRSACAQLARWQMNEGTRHLKIAVNVSAR 765 Query: 488 SLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQ 547 +P F ++D++ + R+ +EL E+ + + + + ALG+R A++ Sbjct: 766 QFHQPDFVASVKDSV-RAAAIDPCRLELELTESAILSDVDETIRRMNELRALGIRFALDD 824 Query: 548 AGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRS 607 G S S++K L + LK+ VR++ + ++ +V +++ +V A GV Sbjct: 825 FGTGYSSLSYLKRLPFDQLKIDQSFVRDMAEDESSEAIVLAILSLSHALGLEVVAEGVEM 884 Query: 608 RSEWQTLIQRGVTGGQGDFFASSQPLDT 635 + L Q G QG F P++ Sbjct: 885 PEQRDFLRQHGCDSFQGYLFGKPLPMEA 912 >UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74BV5_GEOSL Length = 660 Score = 548 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 94/495 (18%), Positives = 176/495 (35%), Gaps = 24/495 (4%) Query: 168 LETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQD 227 ++ R ER + + +S L + +I + + + IR A D Sbjct: 169 MDHRIVLDDGVERIVSQHAELLSADDGRTSRLVGTVHDIT----ERTLAEERIRYLAHHD 224 Query: 228 VKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTN 287 T L NR F+ ++ L ++ G V+ + L F ++DT GH + Sbjct: 225 TLTALPNRFQFEERMEQALAFAQRNGFMMAVLFLDLDHFKKVNDTLGHHAGDRLLQEAAG 284 Query: 288 LLSTFMMRYPGAL----------LARYHRSDFAALLPHRT-LKEAESIAGQLIKAVDTLP 336 L + R ++R +F LL ++A ++ ++I A+ Sbjct: 285 RLMKCLRRSDTLTHASREDASPFISRMGGDEFTILLTDLAHPQDAARVSQRIITALSKRY 344 Query: 337 NNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRG 395 + IGI + G+D +Q++ +A++A +A G N++ Y S+ Sbjct: 345 VIGGHEVFVGASIGISLFPSDGEDCDQLLRNADTAMYHAKELGRNTYQYYSGSMNAMALE 404 Query: 396 NVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQ 453 + + L R RL +P + G+V E + + V +++P+ + Sbjct: 405 RLTLENNLRWALKRNEFRLCYQPQLDAASGRVVGMEALLSWHRPGCDVVPPDDFIPLAEE 464 Query: 454 FGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKS 508 GL + W E L A+ ++ R +R L + Sbjct: 465 TGLIASIGEWVLWNACAQAVTWLHEGLPPVRVAVNLSSLQFRSRRLAELVRKVL-RATGL 523 Query: 509 QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKL 568 + +E+ E + VIR + +GVR +V+ G S S + ++ LK+ Sbjct: 524 PPSHLELEITEGVFMSNEEDAAVVIRDLKKMGVRFSVDDFGTGYSSLSRLSRFPLDALKI 583 Query: 569 HPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFA 628 VR+I L +++ V A GV + ++ L G QG F+ Sbjct: 584 DRSFVRDISADPAAAGLTAAIIAMARNLGLNVIAEGVETHEQFAFLRANGCAEVQGFLFS 643 Query: 629 SSQPLDTNVKKYSQR 643 D R Sbjct: 644 QPLNPDAAAAFLRAR 658 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 548 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 80/448 (17%), Positives = 169/448 (37%), Gaps = 19/448 (4%) Query: 206 IQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPD 265 I + + + A D TGL NR ++L ++ + G G +++I L + Sbjct: 599 INTNVTERKAAEHKVHQLAFYDPLTGLPNRELLGDRLQHAMQ--VRHGQVGALLLIDLDN 656 Query: 266 FNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE----- 320 F L+DT GH+ + + L T + + G LAR +F +L + Sbjct: 657 FKTLNDTLGHAMGDLLLQQIAQRLQTCLRK--GDTLARVGGDEFVIVLEGLSASPGDAGS 714 Query: 321 -AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQG 378 A + +++ + IGI + +++ + A+ A A G Sbjct: 715 LATRVGEKILASFARPFQLADYVHHCTASIGITLFNDRPTTLDELRKRADLAMYQAKAHG 774 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG 438 N+ +D ++ + + L G L+ + V G V E + R Sbjct: 775 RNALRFFDPAMQAVVAARAELEVDLREALRLGAFELHYQAQVDARGCVSGAEALLRWQHP 834 Query: 439 N-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP------EENLAIQVTVESLIR 491 ++ A ++P+ + GL + L W +LA+ V+ + Sbjct: 835 QRGWIAPASFIPLAEETGLILPLGLWVLDVACAQLVAWSKMPHMARLSLAVNVSARQFRQ 894 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 F + + + + +R+ +EL E+ + ++ + + A G+ +++ G Sbjct: 895 ADFAAQVLAAIER-SGADPRRLKLELTESLMLDNLDDTILKMSALKAHGIGFSLDDFGTG 953 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S +++K L ++ +K+ VR++ + + +S++ + +V A GV + ++ Sbjct: 954 YSSLAYLKRLPLDEIKIDQSFVRDVLIDANDASIARSILALGQSLNLEVVAEGVETDAQH 1013 Query: 612 QTLIQRGVTGGQGDFFASSQPLDTNVKK 639 L + G QG F QP Sbjct: 1014 AFLAEHGCQAYQGYLFNRPQPARQFEAW 1041 >UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNY7_9PROT Length = 1003 Score = 548 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 97/465 (20%), Positives = 183/465 (39%), Gaps = 24/465 (5%) Query: 193 PRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKV 252 P + ++R+I + IR A D TGL NR F +L L + Sbjct: 500 PHGPDKVVVVVRDIT----LQKHSEEKIRRLAYFDTLTGLPNRQSFLERLDRELLRARRT 555 Query: 253 GTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMM----------RYPGALLA 302 ++ + L F ++DT GHS + T+ + L + A Sbjct: 556 NHRMALLFLDLDGFKRINDTLGHSAGDCLLQTVADRLQEKLRAGAFIARPALDESSLHFA 615 Query: 303 RYHRSDFAALLPHRT-LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDT 360 R +F +LP ++ A IA ++ + + + IGI + G D Sbjct: 616 RLGGDEFTVVLPDVDTVETACLIAQRIQELLGRPTLIGEQEIAVTSSIGIALFPDDGADA 675 Query: 361 EQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV 420 +++HA++A A QG N+W +YD +L + + I + L RG RL+ +P V Sbjct: 676 ATLLKHADTAMYYAKEQGRNNWQLYDRTLTTRTTARLALEGDIRKGLERGEFRLFYQPQV 735 Query: 421 TRE-GQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE 478 + + G + E + R VS A ++P+ + GL ++ +R W + Sbjct: 736 SADDGTIVGVEALIRWQHPQQGLVSPARFIPVAEESGLIVPIGEWVLTAACRQVRQWQQS 795 Query: 479 NL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVI 533 + A+ V+ L F + ++ R+ +EL E+ + ++ + Sbjct: 796 GVPVPRVAVNVSARQLGAAGFLDTVAAIIVAT-GIAADRLELELTESILMDPEAKRIKGL 854 Query: 534 RLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEAC 593 + A+GV +++ G S S+IK + LK+ V + + ++ + +++ Sbjct: 855 SRLRAMGVHFSIDDFGTGYSSLSYIKRFPIGTLKIDQSFVHGLPQDADDAGITTAIISMA 914 Query: 594 SGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVK 638 + +V A GV +R + L + QG F+ P D Sbjct: 915 RSLNLEVVAEGVETREQLAFLQRALCPKLQGYLFSYPLPPDEMEA 959 >UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Bacteria RepID=B7KEB0_CYAP7 Length = 684 Score = 547 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 103/585 (17%), Positives = 230/585 (39%), Gaps = 25/585 (4%) Query: 67 ELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPG------MSLR 120 E+ + I+ + Y N Y+ + ++D+ +++ I +P SL Sbjct: 98 EIQATYYIINSPVNSSFSPQYHYLENN-YKSLTATDINKKIKEKTIVYPQDFLFKLASLV 156 Query: 121 LVYQDPMGNYFHSLMTTAPLTGA-IGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGE 179 + +P+ T + A F + L + L Q + I + Sbjct: 157 ELSPNPIFEVNFQGKITYLNSLANQKFKDLKKKSLHHPLLKNLLDQGKPKDEKIVIREVK 216 Query: 180 RGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFD 239 G V + + + + + +I + + + + A D T L NR F Sbjct: 217 IGDEVFEQHLHYLTE-NKLIRSYIFDITDRKM----AENSLHYQAYYDTLTDLPNRSLFY 271 Query: 240 NQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGA 299 +L+T L T VM I L F ++DT GH+ +E + L + Sbjct: 272 EKLSTALAKAYLEETLIAVMFIDLDGFKNINDTLGHTLGDELLGSFAQRLRHNLR--SSD 329 Query: 300 LLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SG 357 +LAR+ +F L+P +E E A ++ + IG+ + G Sbjct: 330 ILARWGGDEFTILIPQIKNEEEIEICAKRVFSILQQPFQVGNHLLYLKASIGVAIYPRDG 389 Query: 358 QDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQK 417 QD E ++++A++A G N + IY + K + L+ Q L + L+ + Sbjct: 390 QDAETIIKNADAALYRTKEMGRNHYQIYHPLITSKTSERLEMENLLHQALEKDQFLLHYQ 449 Query: 418 PAVTREGQ-VHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW 475 P + + Q + E + R VS A+++P+ + GL + + R W Sbjct: 450 PQINIKNQAICGMEALIRWEHPTLGLVSPAKFIPIAEESGLIISIGEWVLRQACEQNRLW 509 Query: 476 PEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQ 530 ++ L A+ ++ + +P F + L + + + + +E+ E + +++ Sbjct: 510 QKKGLPPVRVAVNLSAQQFQQPNFVNIVTKILAETN-LEPQFLELEITETTIMKNLEFSC 568 Query: 531 PVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLV 590 ++ + +GV ++++ G S ++K++ +K+ +++++ + ++ ++ +++ Sbjct: 569 QIVHDLKHMGVHISMDDFGTGYSSLGYLKQIPFNTIKIDQSFIKDLQDKPQDLAIISAVL 628 Query: 591 EACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDT 635 G + +V A GV ++ + + L + QG F+ + Sbjct: 629 AIGRGFNVRVIAEGVETQHQVELLRKLECEEMQGFKFSKPLKPEA 673 >UniRef50_C4ZNV7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZNV7_THASP Length = 884 Score = 547 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 98/495 (19%), Positives = 191/495 (38%), Gaps = 24/495 (4%) Query: 166 ELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAA 225 ET R V E RT L R+I + + +R A Sbjct: 395 HTFETAHRRKDGSVYPVEVTAFPLEVDGRT--VLFNSARDISARKS----AEAEVRKLAY 448 Query: 226 QDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTL 285 D TGL NR +L + GT G ++ I L +F ++DT GH + + + Sbjct: 449 FDALTGLPNRRLLMERLERAQASCARQGTVGALLFIDLDNFKAVNDTVGHQEGDRLLVQV 508 Query: 286 TNLLSTFMMRYPGALLARYHRSDFAALLPH------RTLKEAESIAGQLIKAVDTLPNNK 339 +L + + +AR +F +L ++A ++ +++ A++ Sbjct: 509 AAILVRCVRK--DDTVARLGGDEFIVMLEELGGEGREAAEQAAAVGSKILAALNQRFQLG 566 Query: 340 MLDRDDMIHIGICAWR--SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNV 397 + + IG+ + + + ++ + A+ A A L G N+ +D S+ R Sbjct: 567 SSEHRTSVSIGVSLFGELADEPVDEPLRRADMAMYRAKLGGRNAVCFFDPSMLADVRARA 626 Query: 398 RWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGL 456 + L + L+ +P V +G V E + R V E++P+ + GL Sbjct: 627 DVEAGLWIALEQRQFVLHYQPQVAADGAVLGVEALVRWHHPVRGLVPPGEFIPLAEECGL 686 Query: 457 SEEYDRLQISRLIPLLRYWPEEN------LAIQVTVESLIRPRFQRWLRDTLMQCEKSQR 510 R + L W ++ +A+ V+ + F + L + + Sbjct: 687 ILPLGRWVLEAACAQLAAWADDPWRSRLVIAVNVSARQFLHEDFVAGVVAALER-SGADP 745 Query: 511 KRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHP 570 R+ +EL E+ + + ++ + + ALGV +++ G S +++K L ++ LK+ Sbjct: 746 GRLDLELTESSLVTDVDKVSEKMEALKALGVGFSLDDFGTGYSSLAYLKRLPLDQLKIDR 805 Query: 571 GLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASS 630 VR+I + + + ++ +V A GV + L + G + QG F++ Sbjct: 806 SFVRDILVDPNDAAIARMIIVLADNLGLRVIAEGVECEEQRDFLARNGCSSYQGYLFSAP 865 Query: 631 QPLDTNVKKYSQRYS 645 QP+D R S Sbjct: 866 QPIDALEAFLDARRS 880 >UniRef50_B5ED91 Diguanylate cyclase/phosphodiesterase n=3 Tax=Geobacter RepID=B5ED91_GEOBB Length = 742 Score = 547 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 89/485 (18%), Positives = 194/485 (40%), Gaps = 17/485 (3%) Query: 171 RATRILNGERGSNVLGTIYEWP--PRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDV 228 +A ++ + N G I+ P + TLL ++ + R + A D Sbjct: 249 QARGEVSLDLEQNSTGRIFSLTAFPMGYGMVATLLEDVT----EKKRTAEQLERLAYYDS 304 Query: 229 KTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNL 288 TGL NR +++ + ++ G + + L F +++DT GH ++ + Sbjct: 305 LTGLLNRRMLLDRMEQAIGTAQREGVKVATLFMDLNGFKVINDTLGHKAGDQILVEVAKR 364 Query: 289 LSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIH 348 L + + LAR +F + A +IA LI A+ + + + Sbjct: 365 LQKMVRKR--DTLARLGGDEFVVAATFEKDENASAIAKNLINAITPVYQVCDREVYVGVS 422 Query: 349 IGICAWRSGQD-TEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQML 407 +GI + D E ++++A+ A NA QG + Y L E+ ++ + + Sbjct: 423 VGISIFPDDGDVPETLLKNADIAMYNAKSQGQGGFCFYSAQLNERLHERMQLEFKLRGAV 482 Query: 408 SRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQI 465 R L +P + + G++ E + R D V ++P+ G+ + Sbjct: 483 EREEFFLEYQPILDSKTGRITAVEALLRWNDPEKGRVMPDSFIPLAEDTGVILPLGEWVL 542 Query: 466 SRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEA 520 LR W + +A+ ++ + + + D L+Q + +EL E Sbjct: 543 RTACAKLRQWQDAGVMPVRMAVNISGRQFTQGDLSKTVEDALLQ-SGVHPSWLELELTET 601 Query: 521 DVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRT 580 + +++ + + L V ++++ G S ++K ++ LK+ G + N+ + Sbjct: 602 CLIKNVEETVRKLCRLKGLCVSISIDDFGTGYSSLQYLKNFPIDHLKIDRGFINNVCELP 661 Query: 581 ENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 +++ +V +++ V A GV +R + + L++RG QG +F P + ++ Sbjct: 662 DDRAIVDAIIGIAKAMDLHVIAEGVETRQQAEHLMRRGCDEFQGYYFYRPLPEEKLLEVL 721 Query: 641 SQRYS 645 + + + Sbjct: 722 ASKAA 726 >UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH Length = 838 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 96/457 (21%), Positives = 182/457 (39%), Gaps = 22/457 (4%) Query: 203 LREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIR 262 +I +E R I+ A D TGL NR LA + + G ++ I Sbjct: 373 FEDISERKEAERR----IQDLAYYDELTGLPNRRQLHETLAHAFGEASRDYLIGALLFID 428 Query: 263 LPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK--- 319 L F ++D+ GH+ + + + L + + G LAR +F LLP + Sbjct: 429 LDHFKTINDSLGHATGDWLLKEVASRLKRLVRQ--GDCLARLGGDEFVLLLPSLSASPPQ 486 Query: 320 ---EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAG 375 +A+ IA +LI + N+ +GI + Q + +++ A++A A Sbjct: 487 AEMQADLIAERLISEIAAPYNHAGQVLHIGASVGITLFPGREQGVDDLLKQADTAMYQAK 546 Query: 376 LQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPA-VTREGQVHHRELMCR 434 G + +D S+ + + + L++ LY +P + G + E + R Sbjct: 547 SAGRKTRRFFDASMQLQADRRLLIHNELRSALNQQELTLYYQPQHMVEGGDIIGVEALIR 606 Query: 435 IFDGNE-EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVES 488 VS AE++P+ + L + + W E L++ V+ + Sbjct: 607 WQPPGRALVSPAEFIPIAEETDLIVDIGNWVLYEACAQYVRWEENGIHIPQLSVNVSAKQ 666 Query: 489 LIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQA 548 F + D L + +E+ E+ V H + + ALG+ A++ Sbjct: 667 FHATDFVDRIHDVLASTGMDPAS-LNLEITESVVLGHAEDTISKMSELKALGISFAIDDF 725 Query: 549 GLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSR 608 G S S++K L + LK+ +++I + +N +V++++ V A GV SR Sbjct: 726 GAGYSSLSYLKRLPADELKIDRSFIQDIPRDGDNMAIVEAVIAMARHMGFNVTAEGVESR 785 Query: 609 SEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYS 645 + + L +G QG + P+ +++Y QR + Sbjct: 786 QQLEFLQAQGCHFYQGYLASKPLPVPY-LERYVQRLA 821 >UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Caulobacteraceae RepID=B8H3B9_CAUCN Length = 748 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 84/438 (19%), Positives = 176/438 (40%), Gaps = 8/438 (1%) Query: 206 IQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPD 265 + + R + I A D T L NR+ F L L + + G V + L Sbjct: 261 VSEDIAERKRAEAQIARLAHYDPLTDLPNRVLFQKSLGEALARRSRKGDALAVHFVDLDR 320 Query: 266 FNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE-AESI 324 F ++DT GH + L + G +AR +FA + A + Sbjct: 321 FKTVNDTLGHPLGDALLKIAAERLRGCVRE--GDTVARLGGDEFAIVQTGLDDSNGATRL 378 Query: 325 AGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWA 383 A ++++A+ + + +G+ G D +++++ A+ A A G ++ Sbjct: 379 AARIVEAMAAPFDLQGHHVVIGASVGVSLAPTDGDDADELLKKADMALYRAKADGRGAYH 438 Query: 384 IYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EE 441 ++ ++ E+ + + + L G L+ +P + +V E + R Sbjct: 439 FFERAMDEQLQARRALELDLRRALQAGEFELFYQPLYHLGDERVTGCEALLRWRHPERGM 498 Query: 442 VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE-NLAIQVTVESLIRPRFQRWLRD 500 VS A+++P+ + GL + + R WPE LA+ ++ R + Sbjct: 499 VSPADFIPLAEEIGLIVQLGEWVLRRACAEAANWPEHVRLAVNLSPAQFRDRGLVRTVVS 558 Query: 501 TLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKE 560 L +R+ +E+ E+ + Q ++ + ALGVR++++ G S S+++ Sbjct: 559 ALA-ASGLPAQRLELEITESVLLQDSQANMTMLHDLKALGVRISMDDFGTGYSSLSYLRS 617 Query: 561 LNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVT 620 + +K+ VR+I ++ +++++++ + A GV ++++ L Q+G Sbjct: 618 FPFDKIKIDQTFVRDILHDSDAMAIIKAVLDLGASMGVVTTAEGVETQAQLDALRQQGCA 677 Query: 621 GGQGDFFASSQPLDTNVK 638 QG F + P K Sbjct: 678 EIQGYFISRPAPASEIAK 695 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 91/447 (20%), Positives = 178/447 (39%), Gaps = 13/447 (2%) Query: 206 IQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPD 265 I + Q + + A D T L NRL + L L ++ V+ + L Sbjct: 898 ISSDLSQLRQTEAEREHLAHYDPLTDLPNRLLLRSHLTHALAQAKRHHNQVGVLYLDLDR 957 Query: 266 FNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL-KEAESI 324 F ++D+ G+ +E TLT L+ M LLAR +F +L H +++ + Sbjct: 958 FKNINDSLGYQVGDELLVTLTERLTMHMRSE--DLLARLGGDEFLLVLEHINEPEDSAIV 1015 Query: 325 AGQLIKAVDTLPNNKM-LDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSW 382 A L++ + + IGI + G EQ+++HA++A A G N++ Sbjct: 1016 ARSLLETLAQPFVLHGEREIFIGASIGISIFPNDGDSAEQLIQHADAAMHQAKTLGRNTY 1075 Query: 383 AIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-E 440 Y + L ++ + ++ R+Y +P V G + E + R D Sbjct: 1076 HFYTEDLSRASNEHLELENRLRHAITANQLRVYYQPQVDIATGHIIGAEALVRWQDPERG 1135 Query: 441 EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQ 495 V +++P+ + GL + W + L A+ ++ +R Sbjct: 1136 LVQPGQFIPLAEETGLIGAIGEWVLKETCLQGMRWIDAGLPFLTLAVNLSPHQFLRGNIA 1195 Query: 496 RWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVST 555 + L + R+ +EL E+ + Q + ++ L+ A +R+A++ G S Sbjct: 1196 GLISKVLAET-GFPADRLELELTESALMQQGEDVIKMLHLLRAQDIRLAIDDFGTGYSSL 1254 Query: 556 SWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLI 615 S++K +++LK+ V +I ++ + +++ +V A GV +R + + L Sbjct: 1255 SYLKRFPLDILKIDKSFVDDIPFHQDDMEIAATIIAMGHILGFKVLAEGVETREQLEFLQ 1314 Query: 616 QRGVTGGQGDFFASSQPLDTNVKKYSQ 642 RG QG + P + K + Sbjct: 1315 ARGCDLYQGYLTSPPIPAEEFEKLLKE 1341 >UniRef50_B4B5G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B5G1_9CHRO Length = 997 Score = 547 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 93/487 (19%), Positives = 190/487 (39%), Gaps = 20/487 (4%) Query: 163 AGQELLETRATRILNGERGSNVLGTIYEWPPRTSSA-LDTLLREIQNAREQHSRLDTLIR 221 Q LE R + +G I +W + L +I H + + I+ Sbjct: 516 ISQHNLEFRQKTATGNWKWIMSVGKIVQWDAQHQPIRLLGTHTDITG----HKQSEAKIK 571 Query: 222 SYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQ 281 A D T L NR F L + L G +G ++ I L F L+D GH + Sbjct: 572 HLAYYDPLTSLANRRLFLEHLESALSVARSKGEYGAILFIDLDQFKTLNDARGHDAGDHL 631 Query: 282 FFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE------AESIAGQLIKAVDTL 335 + L + + +AR +F LLP + + +A ++ + + T Sbjct: 632 LIEVAKRLKQSVRK--SDTVARLGGDEFVVLLPQLHHEPTTAAHLSREVAEKVRQKLSTP 689 Query: 336 PNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGR 394 + + IGI + + + +++ A++A +G N +D ++ + Sbjct: 690 FVFQHEEFIISASIGITIFPKANETVSDLLKEADTAMYQVKEKGRNGVCFFDTTMLVQVE 749 Query: 395 GNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQ 453 + + L R RLY +P V ++ E++ R + V ++P+ Sbjct: 750 SRFTLEKELRRALERQEFRLYLQPQVDINERIVGAEVLLRWQHPSLGLVPPCAFIPLAED 809 Query: 454 FGLSEEYDRLQISRLIPLLR----YWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQ 509 GL + + L P+ +L++ ++ L + F L+ + Q Sbjct: 810 TGLIISIGEWVLQQACFFLADFQAKNPDFHLSVNISPRQLSQAEFVSNLKQII-NITAVQ 868 Query: 510 RKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLH 569 + +E+ E + Q + + V+ + LG+ ++++ G S +++K L + +K+ Sbjct: 869 ANSLTLEITERLIIQDVDYVSSVMSKLQDLGINLSLDDFGTGYSSLAYLKRLPLNEIKID 928 Query: 570 PGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFAS 629 V++I + + L+++++ + V A GV + + L +RG QG + Sbjct: 929 KNFVQDIGNYSNHAPLIEAILAVARHFNLTVVAEGVETIEQANFLKKRGCHFYQGYLYGK 988 Query: 630 SQPLDTN 636 QPL+T Sbjct: 989 PQPLETF 995 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 547 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 80/438 (18%), Positives = 188/438 (42%), Gaps = 14/438 (3%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 Q +++ I+ +A D T L NR+ ++L L + V+ + L F ++D Sbjct: 493 QRKQMEEEIKYHAYFDSLTDLPNRVLLKDRLTQGLTYAQLHAEKLAVLYLDLDRFKFVND 552 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIK 330 T GHS + + N LS + + A ++R +F LP+ + KE + ++I Sbjct: 553 TLGHSFGDLLLREVANRLSACVPK--SATVSRQGGDEFTIYLPNIKSEKEVLKVVNRVID 610 Query: 331 AVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSL 389 + + + IGI + G TE ++++A++A + G+S+ + + + Sbjct: 611 SFSRPFHLVDNEIYMKTSIGISIFPDNGDTTEILVKNADTAMYKSKEISGSSYHFFSEGM 670 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFD-GNEEVSSAEY 447 + +++ + + L + +Y +P + + ++ E + R + + ++ Sbjct: 671 DTRTFESIKLENDLYKALEQEELVIYYQPQINGKTNKIEGVEALIRWNHQEHGMIPPDKF 730 Query: 448 MPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTL 502 +P+ + GL + L+ W ++ +++ ++ L + +++ L Sbjct: 731 IPIAEETGLIVPIGEWVLKEACRQLKKWHDQGSPLISMSVNLSARQLEQSDLFAMVKNVL 790 Query: 503 MQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELN 562 + E S K I +EL E + ++ ++ + LG+ +A++ G S ++K+L Sbjct: 791 EEVELSP-KYIQLELTENLIVRNTESTLKTMKKLKGLGINLAIDDFGTGYSSLGYLKKLP 849 Query: 563 VELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGG 622 + LK+ V+++ K + + +++ + V A GV ++ + + L R Sbjct: 850 ISTLKIDKSFVQDMTKD--DAAITNTIITLAKNLNLDVIAEGVETKEQVEFLSARNCYLM 907 Query: 623 QGDFFASSQPLDTNVKKY 640 QG FF+ + K + Sbjct: 908 QGYFFSRPMAAEDIEKLF 925 >UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID=Q89VU0_BRAJA Length = 955 Score = 547 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 81/437 (18%), Positives = 171/437 (39%), Gaps = 10/437 (2%) Query: 205 EIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLP 264 ++ + +R + A D T L NR F ++ L G V+ L Sbjct: 514 DVTERHKAQAR----VAHMARHDSLTDLPNRTLFREKMGEGLNQVAIAGGAMAVLCFDLD 569 Query: 265 DFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESI 324 +F ++D GH+ + + L + + +AR +FA L + AE + Sbjct: 570 NFKTVNDRLGHAAGDRLLRWVAARLKENVGEH--DTVARLGGDEFAVLQRGPQPQSAEKL 627 Query: 325 AGQLIKAVDTLPNNKMLDRDDMIHIGICA-WRSGQDTEQVMEHAESATRNAGLQGGNSWA 383 A +L++ + P + + +GI G D +++M+ A+ A A +G ++ Sbjct: 628 ARRLVEIIGHPPPLESQSIHVGVSVGIAIAPDHGLDADELMKCADLALYQAKARGRGAYQ 687 Query: 384 IYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDG-NEE 441 +++ + E+ R + L L +P V ++ E + R Sbjct: 688 LFEPEMEEEARSRHALEHNLRGALEAREFHLVFQPQVRLESSELTGFEALLRWKHPSRGF 747 Query: 442 VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDT 501 VS AE++P+ + GL + WP+ +A+ ++ + Sbjct: 748 VSPAEFIPIAEENGLIVPIGEWVLRTACATAASWPDVTVAVNLSPVQFRARGLAAMVTSA 807 Query: 502 LMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKEL 561 L + +R+ +E+ E + ++ + ALGVRV+++ G+ S S++++ Sbjct: 808 LAEA-GLPPQRLELEVTETALLDDSEATIEILHQLRALGVRVSLDDFGVGYSSLSYLRKF 866 Query: 562 NVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTG 621 + +K+ V + + E+ +V+++ S + A GV + + + + G T Sbjct: 867 PFDRIKIDRSFVGTLGESPESVAIVRTIASLGSVLGVETTAEGVETEEQLDFVRECGCTA 926 Query: 622 GQGDFFASSQPLDTNVK 638 QG +F P + Sbjct: 927 VQGYYFGRPCPAAEVAR 943 >UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHU8_9GAMM Length = 892 Score = 546 bits (1408), Expect = e-154, Method: Composition-based stats. Identities = 91/451 (20%), Positives = 175/451 (38%), Gaps = 21/451 (4%) Query: 203 LREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIR 262 +I Q + + I A D TGL NR +L + L G V I Sbjct: 439 FTDIT----QRKQDEADIHQLAFYDSLTGLPNRRSLQERLDSALSSCRHTRQLGAVFFID 494 Query: 263 LPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAE 322 L +F L+DT GH Q ++ + N L++ + ++AR +F +L + + E+ Sbjct: 495 LDNFKNLNDTAGHDQGDKLLVEVANRLNSCVRN--ADMVARLGGDEFIVILENLGVDESN 552 Query: 323 SIAG------QLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGL 376 +A ++I + IGI + +++VM+ ++ A A Sbjct: 553 VLAQVKDIVAKVILTIQAPLTIGTQAYHPTCSIGIALFSEKDFSDEVMKRSDMAMYQAKS 612 Query: 377 QGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIF 436 G N++ +D E R + LS L+ +P + + E + R Sbjct: 613 SGKNTYRFFDPVAEEALCSLARMDADLRFALSNQQLELHYQPQYRCQ-TLIGAEALLRWK 671 Query: 437 DGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN------LAIQVTVESL 489 + VS AE++P+ GL I + L+ W E +A+ V+ Sbjct: 672 HPDRGMVSPAEFIPLAEDTGLILPIGEWVIRQACKQLQQWQERPETAELFIAVNVSARQF 731 Query: 490 IRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAG 549 + F +R L+ +++ +EL E+ V + ++ + + G+R A++ G Sbjct: 732 CQDNFVESVRQ-LLNTYGVSAEKLKLELTESLVLMDVEDTIQKMQALRSYGIRFALDDFG 790 Query: 550 LTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRS 609 S S +K L ++ +K+ +R++ + ++ +VQ+++ V A GV + Sbjct: 791 TGYSSLSHLKRLPLDQIKIDRSFIRDVPEDQDDSEIVQAIIAMGQNLGLNVLAEGVETDE 850 Query: 610 EWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 + L + QG +D Y Sbjct: 851 QLAFLTELDCLDIQGFLLGRPSSIDKFETTY 881 >UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHS3_CELJU Length = 856 Score = 546 bits (1408), Expect = e-154, Method: Composition-based stats. Identities = 84/451 (18%), Positives = 179/451 (39%), Gaps = 21/451 (4%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 L R+I +E +R I + A D T L NR ++L + ++ G ++ I Sbjct: 413 LSRDITERKENEAR----INNLAFFDPLTQLPNRRLLQDRLEHAIATGQRQAALGALLYI 468 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE- 320 L DF L+D GH + + + L + + R +F +L + Sbjct: 469 DLDDFKTLNDNRGHHVGDLLLIAVADRLRHSLRHE--DTVGRLGGDEFLVILEGLSNDRD 526 Query: 321 -----AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNA 374 + IA +++++++ + + + IGIC + D E +++ A+ A +A Sbjct: 527 QAAQQVQQIAEKILQSLNQVYVLDEQEYFNSPSIGICLFGDDDADIEDLLKRADQAMYHA 586 Query: 375 GLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCR 434 G N+ +D + + I + L +LY +P V R G++ E + R Sbjct: 587 KAAGRNTLRFFDPHMQASAAQRFALQNEIREALLFNQFKLYYQPQVDRTGRITGAEALIR 646 Query: 435 IFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPE------ENLAIQVTVE 487 +S +++P+ + GL + L +W + L+I V+ Sbjct: 647 WLHPERGMISPMDFIPIAEESGLILPLGNWILDAACQQLIHWKQNPLTAALTLSINVSAR 706 Query: 488 SLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQ 547 +P F + + + + ++ +EL E+ + + + + + + G++ +++ Sbjct: 707 QFQQPDFVTQVLAAVTRT-GANPHQLTLELTESILATNQQDIITKMDALKSHGIKFSLDD 765 Query: 548 AGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRS 607 G S S++K L + LK+ V +I + + + ++ V A GV + Sbjct: 766 FGTGYSSLSYLKRLPINELKIDKSFVNDILTDPNDAAIARMVIRLAQSMELNVIAEGVET 825 Query: 608 RSEWQTLIQRGVTGGQGDFFASSQPLDTNVK 638 + + L Q G QG +F + ++ Sbjct: 826 QRQRDWLEQEGCLHYQGYYFGKPVGAEEFLR 856 >UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3H4_9PROT Length = 904 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 86/456 (18%), Positives = 188/456 (41%), Gaps = 20/456 (4%) Query: 203 LREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIR 262 LR+I R R + I + D TGL NR +++ + + G H ++ I Sbjct: 456 LRDISERR----RAEGKIAELSFFDHLTGLPNRTLLMDRMKLAMTASYRDGKHCALLFID 511 Query: 263 LPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL------PHR 316 L +F L++T GH ++ + L + +AR +F LL Sbjct: 512 LDNFKALNETLGHEIGDQLLRDIAPRLVASVRE--DDTVARLGGDEFLVLLVDLARTESE 569 Query: 317 TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGL 376 + E+I ++I+A+ + IG + + +++ ++ A A Sbjct: 570 AANQVEAIGLKIIEALSQPYSLNNQHYVCTPSIGATLFFGHVVADDLLKQSDLAMYKAKA 629 Query: 377 QGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIF 436 +GG S +D + E + + Q L + L+ +P + G++ E + R Sbjct: 630 EGGASIHFFDPKMEEAVIKRAKIEADLRQGLIKKQFLLHYQPQIFSNGRMTGVEALVRWQ 689 Query: 437 DG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP------EENLAIQVTVESL 489 V ++++P+ + GL + + L W + +A+ V+V+ Sbjct: 690 HPVRGLVPPSDFIPLAEETGLILQLGNWVLEAACKQLAEWATRPELADLTVAVNVSVQQF 749 Query: 490 IRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAG 549 +P F +++ + + + +R+ +EL E+ + +++ + + + A G+ +++ G Sbjct: 750 HQPEFVDHIQEVI-RVTGANPERLKLELTESMLAENVQDIIKKMFALKADGIGFSLDDFG 808 Query: 550 LTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRS 609 S S++K+L ++ LK+ VR++ + + +++V V A GV + + Sbjct: 809 TGYSSLSYLKQLPLDQLKIDQSFVRDVLTDPSDATIAKTIVNLAQSLGLSVIAEGVETEA 868 Query: 610 EWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYS 645 + L G QG FF+ P++ + + +S Sbjct: 869 QRNFLETSGCHSCQGYFFSRPLPIEEFEEYARRCWS 904 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 90/472 (19%), Positives = 184/472 (38%), Gaps = 22/472 (4%) Query: 180 RGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFD 239 R + I + R + L + R+I + R I A D TGL NR Sbjct: 381 RFETIKTPIRDLHGRVTGVL-GVCRDIT----ERKRAAQEIERLAFYDALTGLPNRRLLL 435 Query: 240 NQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGA 299 ++L + ++ G ++ I L +F L+DT GH ++ + L + Sbjct: 436 DRLQRSIATCQRTHKLGALLFIDLDNFKDLNDTLGHDMGDQLLAQVATRLVASVR--AAD 493 Query: 300 LLARYHRSDFAALLPHRTLK------EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICA 353 +AR+ +F +L +AE +A +L+ +++ + IG+ Sbjct: 494 TVARFGGDEFVVMLEALAPDLRTATAQAEMVADKLLASLNQPFALDGGQHYSTLSIGVTL 553 Query: 354 W-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGP 412 + +++++ A+ A A G N+ +D + + Q L+R Sbjct: 554 FGEQRLSVDELLKRADLALYQAKAAGRNTQRFFDPDMQAAVNARSNLEADLRQGLARAEL 613 Query: 413 RLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPL 471 +Y +P V + ++ E + R + A+++P+ Q GL + + Sbjct: 614 LVYYQPVVDHQARLMGAEALVRWRHPQRGMIGPADFIPLAEQTGLILPLGQYVLQTACAQ 673 Query: 472 LRYWPEEN------LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQH 525 L+ W + +++ V+ +P F + L + + +R+ +EL E+ + Sbjct: 674 LQRWSQHPDTAGLSISVNVSARQFRQPGFVAQVLHQL-KSHGADPRRLKLELTESLLLGD 732 Query: 526 ISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLL 585 I + + + GV A++ G S S++K L ++ +K+ VR + + + Sbjct: 733 IEDTIARMAQLKSEGVGFALDDFGTGYSSLSYLKRLPLDQIKIDQSFVREVLADPNDAAI 792 Query: 586 VQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNV 637 V++++ QV A GV + + L G G QG F P++ Sbjct: 793 VRTILALAKSLDLQVVAEGVETTGQLSFLQLHGCEGFQGYLFGRPVPMEVFA 844 >UniRef50_Q9I310 Uncharacterized signaling protein PA1727 n=74 Tax=Proteobacteria RepID=Y1727_PSEAE Length = 685 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 79/458 (17%), Positives = 186/458 (40%), Gaps = 19/458 (4%) Query: 198 ALDTLLREIQNAREQH--------SRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQ 249 A+ ++ + + E +R + + A D T L NR+ D++L ++ Sbjct: 229 AIALIVSVLDSRLEARTSVLATSLARANRELIQLALHDNLTKLPNRMLLDDRLEQAIQQA 288 Query: 250 EKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDF 309 + V+ + L F ++D +GH + + + + +AR +F Sbjct: 289 IRDDRRFAVLFMDLDGFKAVNDAYGHHLGDLLLIEVAERIRANVR--AQDTIARLGGDEF 346 Query: 310 AALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAE 368 L+ R +A ++A +L+K + + IGI + GQ ++M +A+ Sbjct: 347 VLLIEAREPADAATLAEKLVKRISQPYQISRHEVRISASIGIALYPGDGQTRHELMINAD 406 Query: 369 SATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVH 427 +A +A QG N + ++ S+ + ++ + Q L R L+ +P V G + Sbjct: 407 AAMYHAKDQGRNGYCFFESSMNANAQEQLQLLHDLRQALERRQLVLHYQPKVLAPNGPMI 466 Query: 428 HRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LA 481 E + R ++ +++P+ + GL + + +R W + +A Sbjct: 467 GVEALLRWEHPQHGLITPGQFLPLAEKTGLIVQIGEWVLDEACRQMRLWLDGGHADWNIA 526 Query: 482 IQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGV 541 + ++ +R+ L++ + +I+E+ E+ + ++ ++A+GV Sbjct: 527 VNLSALQFAHAGLVDSVRNALLRHS-LEPSHLILEVTESTAMRDADASLVILEQLSAMGV 585 Query: 542 RVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVY 601 ++++ G S ++K L LK+ G + + +++ +V ++V + ++ Sbjct: 586 GISIDDFGTGYSSLLYLKRLPASELKIDRGFINELAHDSDDAAIVSAIVALGRTLNLKIV 645 Query: 602 ATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKK 639 A GV + ++ + L + G QG P + + Sbjct: 646 AEGVETEAQQEFLTRLGCNSLQGFLLGRPMPAEQLLAS 683 >UniRef50_A1KBA9 Conserved hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KBA9_AZOSB Length = 726 Score = 545 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 94/459 (20%), Positives = 183/459 (39%), Gaps = 17/459 (3%) Query: 193 PRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKV 252 R L + R+I + R + +I A D T L NR+ F ++L + ++ Sbjct: 268 GRRGGGLYGVARDIS----ERKRAEEIISFQAYHDQLTRLPNRVLFKDRLELAIAQAQRR 323 Query: 253 GTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAAL 312 VM I + F +++DT+GH++ + + L+ + R G LAR +F L Sbjct: 324 TGALAVMFIDVDRFKLVNDTFGHAEGDMLLRGIAARLAGTLRR--GDTLARLGGDEFTVL 381 Query: 313 LPHRT-LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESA 370 LP ++AE IA +++ ++ D IGI + G E + HA+ A Sbjct: 382 LPDINGPQDAEVIARKILDSLSAPFPLSHGDFRATASIGIALFPRDGDGAEDLTRHADIA 441 Query: 371 TRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHR 429 G N + +D +L R + + L R L+ +P ++ +V Sbjct: 442 MYQVKRSGKNGFRFFDIALNSHYRERIVLENDLRTALERREFELHYQPQISLTQHRVVGM 501 Query: 430 ELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQ 483 E + R N VS A ++P+ + GL + R + L W E +++ Sbjct: 502 EALLRWNHPNLGLVSPATFIPVAEEMGLIGDISRWVLEEACGQLARWREAGHNDLRMSLN 561 Query: 484 VTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRV 543 ++ + + + + + ++ +E+ E+ + Q + + +R + G+ V Sbjct: 562 LSPHDFDSQDVVTMVTECVER-HRLPPSQLELEITESMMMQDAAGVAAKVRGLREAGLSV 620 Query: 544 AVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYAT 603 A++ G + +++++ V LK+ VR +E ++ ++ G Q+ A Sbjct: 621 AIDDFGTGYSALAYLQKFPVSTLKIDRSFVRELEG-PNTNPIISAITGIARGFGLQLIAE 679 Query: 604 GVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 GV + +TL G QG +A P Sbjct: 680 GVERSEQAETLRTLGCDVMQGFLYARPAPAAEATAWLYD 718 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 545 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 87/488 (17%), Positives = 187/488 (38%), Gaps = 14/488 (2%) Query: 154 AVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQH 213 + +++ LA E A + G+ +Y P + T + N Sbjct: 536 GIAAIRQALAANR--EVSAVLRNYRKDGALFWNQLYIAPVPDADGQTTHHIAVINDVTAL 593 Query: 214 SRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTW 273 R + A D T L NR ++L L ++ V+ I L F ++D+ Sbjct: 594 IRYQEQLEYQANYDSLTRLPNRNLLRDRLQHALIVAQRHHKGVAVVFIDLDGFKNVNDSL 653 Query: 274 GHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAV 332 GHS + + + L+ +AR+ +F ++ + + ++ ++ Sbjct: 654 GHSVGDRLLSVVADRLARCAR--ASDTVARHGGDEFVIVMTDTVDEQSLIAWMERVRASI 711 Query: 333 DTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPE 391 + +G + G D E +M+ A+ A A G N++ Y + Sbjct: 712 SEPVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADLAMYRAKDMGRNTFQFYQPEMNV 771 Query: 392 KGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMP 449 + + + L L+ +P V GQV E + R D + ++++P Sbjct: 772 SAGARLNLERRLRRALRDNEFLLHYQPQVDIETGQVVGMEALVRWHDPEVGLIPPSQFIP 831 Query: 450 MVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQ 504 + + GL + + W +E L ++ ++ + + + L + Sbjct: 832 VAEESGLIGPLSEWVLREACRQNKAWQDEGLPPARVSVNLSARQFQQRDIAKLVMQVLEE 891 Query: 505 CEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVE 564 + + +EL E+ + ++ ++ ++ALG+ +A++ G S S++K V+ Sbjct: 892 T-GLDPQYLELELTESTIMRNAEEAVSMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVD 950 Query: 565 LLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 LK+ V +I + ++++ + +++ + QV A GV + ++ L +R QG Sbjct: 951 RLKIDRSFVSDIGESSDDETITSAIIALAHSLNLQVIAEGVETSTQLDFLKERACDEMQG 1010 Query: 625 DFFASSQP 632 FFA P Sbjct: 1011 YFFAKPLP 1018 >UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y791_LEPCP Length = 1066 Score = 545 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 99/444 (22%), Positives = 187/444 (42%), Gaps = 16/444 (3%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 ++ +I +E RL + A D T L NRL ++L + + V+ Sbjct: 609 SVFTDITPQKEAEQRL----QHLAHFDPLTQLPNRLMVLSRLEHAIASAARAERRVAVLF 664 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLK 319 I L +F ++D+ GHS ++ + + L T R L R +F +L H R + Sbjct: 665 IDLDNFKTVNDSLGHSAGDDLLRAVADRLGTRTRRE--DTLGRLGGDEFILMLEHLREPQ 722 Query: 320 EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQG 378 +A +A +LI ++T + IGI + G + +++ A++A A G Sbjct: 723 DAAQVAQELIGLLETPFRVAGQEVYVQASIGISLYPDDGLEVGELVRDADAAMYQAKRAG 782 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQ-VHHRELMCRIFD 437 + Y +SL + + T + + L L+ +P + + E + R+ Sbjct: 783 RGVYRFYTESLTTAAQSRLALDTRLRRALENKEFVLWYQPLYRLADRCLIGLEALVRLNQ 842 Query: 438 GN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIR 491 + AE++P++ + G R W +E L AI ++ + + R Sbjct: 843 PGLPPIGPAEFIPLLEETGQITTLGAWVTQEACRQGRAWLDEGLDFGRIAINLSPQEIRR 902 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 + +R+ L + +R+ +EL E+ + + R + + + ALGVR+A++ G Sbjct: 903 GQTDERVREALER-SGLPAERLELELTESGLMEQGERAEAFLHRLRALGVRLAIDDFGTG 961 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S +++K V LK+ VR++ + LVQ++V V A GV + +++ Sbjct: 962 YSSLAYLKRFPVSKLKIDRSFVRDLPADANDAQLVQTMVSMGRNLGISVLAEGVETEAQF 1021 Query: 612 QTLIQRGVTGGQGDFFASSQPLDT 635 L G QG FF+ +P D Sbjct: 1022 DYLRSLGCDAAQGYFFSPPRPADE 1045 >UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y2A0_LEPCP Length = 810 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 83/461 (18%), Positives = 179/461 (38%), Gaps = 21/461 (4%) Query: 192 PPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEK 251 P + + ++ +I + ++ + A D T L NR ++LA L + Sbjct: 347 PAQPQAGCIWVIEDISARKA----VEDEVNRLAFYDPLTQLPNRRLLRDRLAQALAASAR 402 Query: 252 VGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAA 311 G HG ++ I L +F L+DT GH++ ++ + L+ + +AR +F Sbjct: 403 SGMHGALIFIDLDNFKSLNDTLGHARGDQLLKLVGQRLTHCVRE--SDTVARLGGDEFVV 460 Query: 312 LLPHRTLK------EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQD-TEQVM 364 ++ + +AE + +++ A++ R IGI + +D + ++ Sbjct: 461 IVQDLGARLDECATQAEGVGEKILDALNQPYPLDGHVRHSTPSIGITLFADDRDSVDDLL 520 Query: 365 EHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREG 424 + A+ A A G N+ +D + + + + L+ +P V G Sbjct: 521 KEADMAMYQAKTAGRNTLRFFDADMQAMLVQRAALEEDMRESMRLSHFLLHYQPQVVGSG 580 Query: 425 QVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE----- 478 ++ E++ R V AE++P+ L + L W + Sbjct: 581 RITGAEVLLRWPHPLRGLVPPAEFIPLAEDTNLITALGHWVLETACKTLADWSAQDDMKH 640 Query: 479 -NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVN 537 ++++ V+ +P F + L + + + +EL E+ + + + + + + Sbjct: 641 LSVSVNVSARQFRQPHFVAEVMSILERT-GADPHLLKLELTESLLVEDVEDIVAKMSALK 699 Query: 538 ALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTS 597 + GV +++ G S + +K L ++ LK+ VR+I + + + +V Sbjct: 700 SRGVGFSLDDFGTGYSSLAHLKRLPLDQLKIDQSFVRDILTDPNDLAIGRMVVALADSLG 759 Query: 598 TQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVK 638 V A GV ++ + L Q G QG F+ P + Sbjct: 760 LTVIAEGVELAAQRELLAQIGCDAYQGYLFSRPLPREPFEA 800 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 90/427 (21%), Positives = 176/427 (41%), Gaps = 16/427 (3%) Query: 226 QDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTL 285 D TGL NR ++L +L + +G V+ L F ++D+ GH+ + + Sbjct: 664 FDPLTGLPNRSLLFDRLQEVLN---REPHNGAVLFCDLDRFKNINDSLGHTLGDAVLKEV 720 Query: 286 TNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA-ESIAGQLIKAVDTLPNNKMLDRD 344 L + PG + RY +F +LP + E +A QL+ V + LD Sbjct: 721 ARRLVARVR--PGDTVCRYGGDEFVLVLPGLSDCVVLEQLAEQLLADVSSPILLDGLDLR 778 Query: 345 DMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLI 403 +G+ + G D + ++ HA++A +A +G N++ + + ++ + + Sbjct: 779 VTPSLGVAVFPRDGNDCDALLRHADAALYHAKSRGRNTYRFFTREIDDRVSEYLHIEHGL 838 Query: 404 EQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYD 461 L RG L+ +P V G+V E + R +S ++P+ + GL Sbjct: 839 RSALERGEFELHYQPQVDMAFGRVVGVEALLRWKHPEQGMISPVRFVPIAEETGLIVPIG 898 Query: 462 RLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIE 516 I W L A+ ++ R + + L + + +E Sbjct: 899 MWVIREACRQAMLWRRAGLRPMTMAVNLSGRQFSR-SVIEAIDEALAD-SGLDPRWLQVE 956 Query: 517 LAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNI 576 + E+ + + V+ + A G+ VAV+ G S +++K ++ LK+ +R+I Sbjct: 957 VTESVIMEDTQEAYTVLEALRARGLTVAVDDFGTGYSSLAYLKRFPIDKLKIDRSFIRDI 1016 Query: 577 EKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTN 636 + +N ++V +++ +V A GV +R++W L Q+G QG + QP Sbjct: 1017 DLDEDNPVIVDAIIGMAHNLRIKVLAEGVETRAQWDYLRQQGCDEVQGYLVSRPQPAAAL 1076 Query: 637 VKKYSQR 643 + +R Sbjct: 1077 GQWMLER 1083 >UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPG4_9GAMM Length = 862 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 97/507 (19%), Positives = 201/507 (39%), Gaps = 28/507 (5%) Query: 147 IIVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREI 206 + V+ + +R Q L Q LE + +S +D L + Sbjct: 373 VFVLYVIGLRLSQNLLLFQRNLEESVDSWTKLDTRHLHFKEFKHLASSVNSMIDGLNMQ- 431 Query: 207 QNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDF 266 +R A D T L NR+ QL ++ K ++ I L F Sbjct: 432 ----------AEELRHRAFHDHLTSLPNRMHSSTQLDLMISHTIKHQATAALLFIDLDHF 481 Query: 267 NMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAAL---LPHRTLKEAES 323 ++DT GHS +E ++ L + ++AR +F + L T +AES Sbjct: 482 KEINDTLGHSTGDELLRKVSQRLRRSVREE--DIVARLGGDEFTVITGVLE--TRSDAES 537 Query: 324 IAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSW 382 IA +L+ + + IG+ + G ++E ++ +A+SA A G N + Sbjct: 538 IAQKLLNELIRPYLIDGNELSVTASIGVSFFPEDGDNSEILLRNADSAMYEAKRNGRNGY 597 Query: 383 AIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-E 440 +Y ++ E+ + + +SR LY +P V R G + E + R Sbjct: 598 RLYTSAMTEEISERFALTEELREAISREELELYFQPQVDIRTGSILGAEALLRWNHPQRG 657 Query: 441 EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQ 495 + ++P+ G + + ++ + W E + A+ ++ + + R Sbjct: 658 MIPPDRFIPIAESSGQMIKIGAWVLEQVCAKVAGWKERGIVAPKIAVNISNQQMNR-ELV 716 Query: 496 RWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVST 555 + + L+ K + +E+ E+ + ++ ++ + + ALGV +A++ G S Sbjct: 717 EQITE-LLASSKCDPACLELEITESCLMENPEQMAHELSSLKALGVGIAIDDFGTGYSSL 775 Query: 556 SWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLI 615 S++K+L + LK+ V +++ + + +++V + V A G+ ++ + L+ Sbjct: 776 SYLKQLPINKLKVDRSFVSDLQDDENDLAITRAIVAMGQSMNLNVIAEGIETQEQIDLLL 835 Query: 616 QRGVTGGQGDFFASSQPLDTNVKKYSQ 642 + GQG F++ P + + Q Sbjct: 836 KLECFEGQGYFYSKPLPEEQFLAYLDQ 862 >UniRef50_Q1N453 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Bermanella marisrubri RepID=Q1N453_9GAMM Length = 800 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 84/453 (18%), Positives = 183/453 (40%), Gaps = 20/453 (4%) Query: 203 LREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIR 262 + +I + + +++ L A D TGL+NR F ++L + + ++ G+ ++ + Sbjct: 349 ISDITDLKVAQLQMENL----AFFDPLTGLSNRRLFKDRLHKSISESKRRGSFVALLFLD 404 Query: 263 LPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEA 321 L F ++D+ GH + L + ++R +F LL Sbjct: 405 LDQFKRINDSLGHDAGDVLLEETARRLENSVRE--SDTVSRIGGDEFTVLLNDVENTHGV 462 Query: 322 ESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGN 380 IA +++K V K + + + IGI G D +M +A+ A A G N Sbjct: 463 RHIAEKILKKVCRPIMVKNQEIINTVSIGITLAPTDGDDVNTLMRNADMAMYQAKAMGRN 522 Query: 381 SWAIYDDSLPEKGRGNVRWRTLIEQMLS-RGGPRLYQKPAVTR-EGQVHHRELMCRIFDG 438 ++ + + + ++ G + + + +Y +P + G+ E + R Sbjct: 523 NYQFFSEEMNKEMMGYLEIEKDLRHSIDYPEDFIIYYQPKIELHSGRFVGAEALIRWKPE 582 Query: 439 NE-EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRY------WPEEN-LAIQVTVESLI 490 + + ++P+ + GL I + ++Y WPE+ +AI ++ Sbjct: 583 GKDMIPPDRFIPIAEESGLIVPIGAHVIRQACLQVKYMINTGIWPEDGKVAINLSARQFS 642 Query: 491 RPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGL 550 P L++ L Q K + E+ E+ + ++ +R + +G+ +A++ G Sbjct: 643 DPDLICKLQEILEQT-KCPVHVLEFEITESTLMDNVENAIFTMRQIKEMGISIAIDDFGT 701 Query: 551 TLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSE 610 S +++K +++LK+ V +I + + +++ QV A G+ ++ + Sbjct: 702 GYSSLAYLKRFPIDVLKVDRSFVMDIPNDLNDMEITAAVIAMAHKLHLQVVAEGIETQEQ 761 Query: 611 WQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 L GQG A P D ++++ QR Sbjct: 762 IDFLKSNYCEYGQGFMIARPMPSDE-LERFIQR 793 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 92/484 (19%), Positives = 183/484 (37%), Gaps = 19/484 (3%) Query: 175 ILNGERGSNVL-GTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLN 233 I N + +V + R + T H IR A D TGL Sbjct: 527 IWNRRKNGDVFPEWLTISSVRDGDGVVTHYVSALTDMSAHKAAQEEIRHLAFYDALTGLP 586 Query: 234 NRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFM 293 NR ++L + + G ++ I L +F L+DT GH + + LS+ + Sbjct: 587 NRRLLHDRLRVAIASSVRSERQGALLFIDLDNFKTLNDTLGHDMGDRLLQQVGQRLSSSV 646 Query: 294 MRYPGALLARYHRSDFAALL------PHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMI 347 G +AR +F +L P ++ + ++IK ++ + D + Sbjct: 647 RE--GDTVARLGGDEFVVMLENLGERPEEAAGQSRIVGEKIIKLLNRPYDLSGHDYHNTP 704 Query: 348 HIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQM 406 +GI + Q +++M+ A+ A A G N+ +D + + Sbjct: 705 SVGITLFGGQQVGIDELMKRADLAMYEAKASGRNALRFFDPRMQAVVTARADIEKDLRAA 764 Query: 407 LSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEE-VSSAEYMPMVLQFGLSEEYDRLQI 465 + R L +P V GQV E + R VS AE++P+ + GL + Sbjct: 765 VGRQSFFLAYQPQVDASGQVIGAEALLRWQHQQRGTVSPAEFIPVAEETGLILPLGLWVL 824 Query: 466 SRLIPLLRY------WPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAE 519 +++ V+ + F + L + + + + +EL E Sbjct: 825 ETACAQAALWAARPGRERFTVSVNVSARQFRQANFVDQVLAVLAR-SGAHPRNLKLELTE 883 Query: 520 ADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKR 579 + + ++ + + + A GV +++ G S S++K+L ++ LK+ VR++ Sbjct: 884 SMLLDNVQDIIAKMSALKARGVGFSLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDLLTD 943 Query: 580 TENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKK 639 ++++ ++++ V A GV S + L +G QG F+ L + + Sbjct: 944 PNDEVIARTIIALARTLGLSVIAEGVESVEQQDALAAQGCLAYQGYLFSRPLAL-ADFEA 1002 Query: 640 YSQR 643 + +R Sbjct: 1003 FLRR 1006 >UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S8G6_CHRVI Length = 861 Score = 544 bits (1402), Expect = e-153, Method: Composition-based stats. Identities = 96/449 (21%), Positives = 186/449 (41%), Gaps = 14/449 (3%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 + +I + + SRL+ L A DV TGL NRL +L L+D ++ V + Sbjct: 279 MFIDITDLKNSQSRLENL----AHYDVLTGLPNRLLLGYRLRQALDDAQRHERLAAVCFL 334 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKE 320 L +F +++D GH + + L + +AR +F LL R +E Sbjct: 335 DLDNFKLVNDHHGHETGDRLLIDIGRRLRDTLR--SNDTVARLGGDEFVILLNDLRNQEE 392 Query: 321 AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGG 379 +++ +L+ V L + +G+ + D + ++ HA+ A A G Sbjct: 393 LDNVLVRLLDGVAHPVRIDALQIVITVSVGVTIYPLDDHDPDTLLRHADQAMYQAKQMGR 452 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFDG 438 N + ++D + R I Q L G +LY +P V GQV E + R Sbjct: 453 NRYQLFDPEAANAMQSRHRELERIRQALQHGEFQLYYQPKVDMRLGQVVGMEALIRWRHP 512 Query: 439 N-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN----LAIQVTVESLIRPR 493 V +++P++ L E + + +R W E +++ + + Sbjct: 513 ERGLVPPLQFLPLIEASPLIVEVGEWVLHEALGQIRQWCAEGRPLTISVNIAAHHFQQRD 572 Query: 494 FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLV 553 F L+ L + ++ + + +E+ E+ + I ++ ++ A+GVR A++ G Sbjct: 573 FVLRLQTILAEHPEATPRLLELEILESAALEDIQSVRGIMTACQAMGVRFALDDFGTGYS 632 Query: 554 STSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQT 613 S S++K+L E LK+ VRN+ + +E+ +++ ++ +V A GV + + Sbjct: 633 SLSYLKQLPAETLKIDQSFVRNMLEDSEDLAIIEGVIGLAKVFRKEVIAEGVETPEQGLL 692 Query: 614 LIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 L++ G QG P + + Sbjct: 693 LMRFGCDHAQGYGIGRPMPAEQIPAWMDE 721 >UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FU0_DECAR Length = 1006 Score = 543 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 89/452 (19%), Positives = 185/452 (40%), Gaps = 17/452 (3%) Query: 203 LREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIR 262 ++ + R RL A DV TGL NRL +L L + G+ V+ + Sbjct: 562 FTDVSSERAAEERL----HHMAHHDVLTGLLNRLSLKGRLDQALAAARRDGSRVAVLFVD 617 Query: 263 LPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAE 322 L F +++DT GH +E + N L + ++AR +F +L A Sbjct: 618 LDRFKVINDTLGHHVGDELLIEVANRLRDGVR--DSDVVARVGGDEFVIMLSGVEHTSAV 675 Query: 323 S-IAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGN 380 + +A +L+ +V D IGI + G+D + +M++A++A +A + G N Sbjct: 676 AMVAEKLVFSVGQSYQIGGYDLYSTPSIGIAIYPTDGEDGDILMKNADAAMYHAKMAGRN 735 Query: 381 SWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN 439 ++ +D + E + + + L+ LY +P + +V E + R Sbjct: 736 NFQFFDAKMNEAALERLNTEHALRRALANQEFCLYYQPVIDLASNRVASLEALIRWNHPE 795 Query: 440 -EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLA-----IQVTVESLIRPR 493 + +++ + + GL + + L + ++ + ++ + Sbjct: 796 KGLLLPGKFIGIAEETGLIQPLGEWVLWAACRQLADFAAAGISGIKMGVNISAIQMRNGN 855 Query: 494 FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLV 553 L +++ + +I E+ E+ + + ++ L+NA+GV VA++ G Sbjct: 856 LP-LLARGVIEAYDIDPRNLIFEITESVAMEQPTETVRILDLLNAMGVSVAIDDFGTGYS 914 Query: 554 STSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQT 613 S S+++ + LKL V I + + ++ + + +V A GV ++++ Sbjct: 915 SLSYLRMFPINHLKLDRSFVEQIGEEIDGCVICDATIGLAHSLELKVVAEGVETQAQLDY 974 Query: 614 LIQRGVTGGQGDFFASSQPLDTNVKKYSQRYS 645 L RG QG F+ P D + + ++Y+ Sbjct: 975 LRSRGCDMVQGFLFSRPVPADEVLA-FIRQYN 1005 >UniRef50_Q220B0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q220B0_RHOFD Length = 701 Score = 543 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 98/504 (19%), Positives = 191/504 (37%), Gaps = 25/504 (4%) Query: 157 WLQRQLAGQELLETRATRILNGERGSN----VLGTIYEWPPRTSSALDTLLREIQNAREQ 212 +L+R R ++G+R + ++ E + L+ +I Q Sbjct: 202 YLRRHQHTGAGCAMGQGREVDGQRRDGSVFPISVSVSELMHNGQTQFIGLVHDIT----Q 257 Query: 213 HSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDT 272 R + I A D TGL NR ++L L + G HG ++++ L F +++T Sbjct: 258 RRRSEENIYRLAFYDKLTGLPNRRLLMDRLKQALITSTRTGQHGALILLDLDHFKQINET 317 Query: 273 WGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL------PHRTLKEAESIAG 326 +G +E + L T + ++R+ +F +L P +AE+IA Sbjct: 318 FGLDAGDELLQQVGQRLPTCVR--DDDTVSRFGGDEFMVMLEALSSQPQEAAIQAEAIAQ 375 Query: 327 QLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIY 385 +++ A+ + IG+ +R Q + +++ + A A G N+ + Sbjct: 376 KILLALAQPYRLRGHTHGTTPSIGVVMFRQAQVSLDDLLKMTDVAMYQAKAAGRNTVRFF 435 Query: 386 DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NEEVSS 444 D +L + + L+ L+ + V +G E + R V Sbjct: 436 DPALQALALARTALEENLRRGLALQEFVLHYQIQVDHQGLPTGAEALLRWQHPVRGMVPP 495 Query: 445 AEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN------LAIQVTVESLIRPRFQRWL 498 A+++P+ + G + + L W + LA+ V+ +P F + Sbjct: 496 AQFIPLAEETGFILPLGQWVLESACRQLVAWSHQRATGSWTLAVNVSALQFAQPDFVAHV 555 Query: 499 RDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWI 558 L Q + + +EL E+ + + + + + A GV A++ G S S++ Sbjct: 556 TSAL-QATSANPTLLKLELTESMLVGDVQDVITKMNALKAQGVSFALDDFGTGYSSLSYL 614 Query: 559 KELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRG 618 K L ++ LK+ VR++ + ++ Q++V QV A GV + + L G Sbjct: 615 KRLPLDQLKIDQSFVRDLLINPNDAVIAQTIVALGHNLGLQVIAEGVETVGQHDYLASIG 674 Query: 619 VTGGQGDFFASSQPLDTNVKKYSQ 642 QG +F P Q Sbjct: 675 CDAFQGYYFGRPVPAAELACLLKQ 698 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 543 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 81/468 (17%), Positives = 183/468 (39%), Gaps = 18/468 (3%) Query: 194 RTSSALDTLLREIQNAREQH---SRL---DTLIRSYAAQDVKTGLNNRLFFDNQLATLLE 247 R L + + E+ RL + + DV T L NR F ++L + Sbjct: 424 RAKDVLAIMAARVSAEIEREISEQRLRDNEDHLEYLVYHDVLTDLPNRQLFRDRLQHAIS 483 Query: 248 DQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRS 307 V+ I L F ++D+ GH + + L + +AR Sbjct: 484 MASLGQHQVGVLFIDLDHFKKINDSLGHEVGDRLLCEVARRLRLCIGGL--DTVARLSGD 541 Query: 308 DFAALLPH-RTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVME 365 +FA +L ++ IA ++ + + + + IGI + G+D +++ Sbjct: 542 EFAIILDQLNNIENVILIAQEVNRRLAEMMVVEGYKLFLTASIGISLYPGDGKDVVSLLK 601 Query: 366 HAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REG 424 A++A A G +++ Y L E+ + + Q + + +Y +P V Sbjct: 602 CADAAMFKAKELGRDNYRFYTAGLNERASELLALEGALRQAVDKNHLVVYFQPQVELASR 661 Query: 425 QVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW-----PEE 478 ++ E + R N +S +++PM + GL + + R W P Sbjct: 662 RIIGAEALVRWQHPENGMISPVDFIPMAEETGLIVSIGEWVLRQSCLQARQWQVAGYPPM 721 Query: 479 NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNA 538 +++ ++ + +R L + + + +E+ E+ + + + +++ Sbjct: 722 RISVNMSARQFRQKDLVPMVRRILQET-GLSPEYLDLEITESILMNDVDGAVERLVELHS 780 Query: 539 LGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTST 598 LG++++++ G S +++K+ ++ LK+ VR++ + + ++++ + Sbjct: 781 LGIQLSIDDFGTGYSSLAYLKKFPIQYLKIDRSFVRDVIIDPNDAAIATAVIDLARNMNL 840 Query: 599 QVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV 646 V A G+ + + Q L+ RG GQG F+ P + ++ V Sbjct: 841 NVIAEGIEQQDQHQFLLDRGCGYGQGYLFSRPIPAHEFEQLLVRQQGV 888 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 543 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 78/440 (17%), Positives = 172/440 (39%), Gaps = 16/440 (3%) Query: 205 EIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLP 264 ++ +E + ++ + A D TGL NR F ++L ++ + ++ + L Sbjct: 191 DVSELKEANRKM----QQMALYDSLTGLANRRLFVDRLEQAVKAASRDRKQIALLFLDLD 246 Query: 265 DFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAES 323 F ++DT GH + T+ L + +AR +F LL Sbjct: 247 QFKRINDTLGHDAGDSLLQTVAQRLKNCVR--AKDTVARLGGDEFTVLLTDIVDTFSVTP 304 Query: 324 IAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSW 382 +A Q++KA+ K + IG+ G + + +M++A+ A A G + + Sbjct: 305 VATQILKALKEPIKLKKHEVIVSTSIGVTLAPTDGANADVLMKNADLALYRAKEHGRDRY 364 Query: 383 AIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFDG-NE 440 Y + L + + L L +P V G++ E + R Sbjct: 365 HFYTEELNAHALKQLLMEQELRHALQFEEFTLGFQPQVNLTTGKIVSVEALIRWHHPSKG 424 Query: 441 EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQ 495 V ++ + + GL R + ++ + +A+ ++ P+ + Sbjct: 425 LVMPDSFISVAEETGLINPIGRWVLKNACMQMKMLQDLTGSAIKIAVNLSARQFDDPKLE 484 Query: 496 RWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVST 555 + + + L + + + + +E+ E+ + I + ++ + GV +A++ G S Sbjct: 485 QSIEEALNET-GLEPEWLELEVTESMLMGDIQAVTNKLKRLRQTGVSLAIDDFGSGYSSL 543 Query: 556 SWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLI 615 S++K+L V LK+ VR+I + + + + +++ +V A GV + + + L+ Sbjct: 544 SYLKKLPVNALKVDREFVRDIPEDSNDMEITSAIIAVAHKLQLKVVAEGVETAEQKEYLL 603 Query: 616 QRGVTGGQGDFFASSQPLDT 635 QG FF+ + Sbjct: 604 ANQCDFAQGYFFSKPLSFED 623 >UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q479L8_DECAR Length = 582 Score = 543 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 93/447 (20%), Positives = 178/447 (39%), Gaps = 17/447 (3%) Query: 208 NAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFN 267 + E + A D T L NRL F++QLA L E+ +M+I L +F Sbjct: 131 SEMEASKEYADRLAYLAYHDPLTNLPNRLAFESQLAQALRGCERDNRQLALMLIDLDNFK 190 Query: 268 MLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAG 326 ++DT GH +E + L + L+AR +F +LP + A +A Sbjct: 191 NINDTLGHHVGDELLQKVALRLRESVR--SSDLVARIGGDEFVIVLPEIESPLTAARVAN 248 Query: 327 QLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIY 385 ++ + + IGI + G D ++ +A++A +A G N+ Y Sbjct: 249 KVQQNMADSYRIADHALYATPSIGISLFPIDGSDANTLLRNADTAMYHAKDAGRNNHQFY 308 Query: 386 DDSLPEKGRGNVRWRTLIEQMLS-----RGGPRLYQKPAV-TREGQVHHRELMCRIFDGN 439 + E + + Q +S L+ +P V T GQV E + R + Sbjct: 309 TARMNEAAGERLHMENELRQAISAISPGDSEFSLHFQPQVQTATGQVFGLEALLRWNNPI 368 Query: 440 -EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPR 493 +VS ++ + + GL + I L+R + + AI ++ + L Sbjct: 369 FGQVSPMRFIAIAEETGLIQPLGDWVIWETCRLIRQMKQHGIEDIRIAINISAQQLRHEN 428 Query: 494 FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLV 553 +R L C + + I +E+ E+ Q+ ++ + A+G+ +A++ G Sbjct: 429 LLLLVRGAL-SCYDLRPEDIELEITESTAMQNPETTLSILDQLAAMGIVLAIDDFGTGYS 487 Query: 554 STSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQT 613 S +++K L ++ LKL V++IE + + + + ++ A GV + ++ Sbjct: 488 SLAYLKHLPIQRLKLDRSFVKDIEIDANDAAICTATIALGHSLGLELVAEGVETEAQRAF 547 Query: 614 LIQRGVTGGQGDFFASSQPLDTNVKKY 640 L G QG ++ P + + Sbjct: 548 LASLGCDTLQGYLYSKPMPFEETIAYL 574 >UniRef50_A8UR98 Sensory box/GGDEF family protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UR98_9AQUI Length = 959 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 82/462 (17%), Positives = 195/462 (42%), Gaps = 10/462 (2%) Query: 192 PPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEK 251 P + + L ++ + ++ A D TGL NR +++ + + + Sbjct: 501 PGTNIAEIKELTESFRDMANKAMSYLEELKKMAYFDPLTGLPNRTLLRDRIESAIHFANR 560 Query: 252 VGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAA 311 G+ ++ I L F ++DT GH + + LS+ +AR+ +F A Sbjct: 561 NGSKVAILFIDLDYFKTVNDTLGHDVGDRILVQVAKRLSSVFRET--DTVARFGGDEFVA 618 Query: 312 LLPH-RTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAES 369 ++P R LK+ +A +++ T D +GI + G++ +++++A+ Sbjct: 619 VIPDVRDLKDVVQVAERILSLFSTPFEANGEDIYLSASVGIAVYPDNGENPTELIKNADM 678 Query: 370 ATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHH 428 A A +G ++++ + + + K + + + + L RG LY +P + + + Sbjct: 679 AMYRAKEEGKSNFSFFTEEMNSKAVEILSVKNKLHKALERGEFLLYYQPIYSLGDNSIVG 738 Query: 429 RELMCRIFDGNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN---LAIQV 484 E + R D + VS A++MP++ + GL +E R + R W + +++ + Sbjct: 739 LEALLRWRDPDRGLVSPAKFMPILEELGLVKEVGRWVMGEAFKKSREWGDRYGIYVSVNI 798 Query: 485 TVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVA 544 + + F + + + + +++E+ E + ++ +++ + A G +VA Sbjct: 799 SPRQFMDRNFVKRVLQIASDTN-ANNEHVVLEITETSLMRNPEESVSILKRLRAKGFKVA 857 Query: 545 VNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATG 604 V+ G S +++K L ++++K+ + + K ++ +V +++ + A G Sbjct: 858 VDDFGTGYSSLAYLKRLPIDIIKVDMTFTQGMVKSNVDRSIVMAVIGLSKSLGLKSLAEG 917 Query: 605 VRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV 646 V +R + L + G QG F + + + Sbjct: 918 VETREQVNILRELGCDLAQGYLFGKPMKEEEAEALIRKEKGL 959 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 77/460 (16%), Positives = 183/460 (39%), Gaps = 13/460 (2%) Query: 192 PPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEK 251 P L + + + R + I A D TGL NR+ F+ Q+ +LE+ + Sbjct: 312 PCEQEQELIAMAAHLAGIAIERKRAEDRISFLAHHDALTGLPNRVLFEEQVDGMLEEIRE 371 Query: 252 VGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAA 311 ++ + L +F +++D+ GH+ +E + + + + + R +F Sbjct: 372 RDQCAVLAFLDLDNFKLINDSLGHAAGDELLKAVAGRMRASVRK--ADFVVRVGGDEFII 429 Query: 312 LLPHRTLKEAESIA--GQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAE 368 LL + ++ + A+ + +G+ + + G+ +++ +A+ Sbjct: 430 LLNGLPKERDIVLSRLEDIRSAIAMPLQLQGRSLQVSCSMGVACFPNQGRTAGELLANAD 489 Query: 369 SATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVH 427 A A G ++ ++ + + + ++W+ + + L+ L+ +P + G++ Sbjct: 490 MAMYRAKELGRDNIQVFTEEMAARAHERLQWQEELREALAGEEFLLHFQPQMNLGTGRIF 549 Query: 428 HRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----A 481 E + R +S + ++P+ + GL + L+ W + L + Sbjct: 550 AAEALLRWNHPVRGIISPSVFIPLAEETGLIVPIGDWALRAACRQLKAWQDAGLPPLIIS 609 Query: 482 IQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGV 541 + V+ + + + L + + + + +EL E+ + Q + + + A+GV Sbjct: 610 VNVSARQFRERNWASRVAEILKET-GLEARYLELELTESLIMQDVPGAIATMHALEAIGV 668 Query: 542 RVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVY 601 +A++ G S S +K V LK+ V +I ++ + +++ +V Sbjct: 669 HLAIDDFGTGYSSLSALKRFPVRRLKIDRSFVTDIPLDADDMAITSAIISLAQKLGLRVI 728 Query: 602 ATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 A GV S ++ + L + G QG FF+ + S Sbjct: 729 AEGVESEAQVEFLQKAGCDEIQGYFFSRPLSAEAFESLLS 768 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 98/504 (19%), Positives = 197/504 (39%), Gaps = 19/504 (3%) Query: 153 LAVRWLQRQLAGQ---ELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNA 209 L R + GQ E R R ++V + + T S L+ I Sbjct: 198 LTERLFAEAMGGQTRSHDYEKRYIRRDGETLWAHVSTSWHYNEDGTPSYSVALISNITP- 256 Query: 210 REQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNML 269 H + IR A D TGL NR F + L + + V +I + F + Sbjct: 257 ---HHQAKQKIRQLAYFDGLTGLPNRQLFLEHCNSSLTQARRNRSPLGVCIIDIDRFKGV 313 Query: 270 SDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFA-ALLPHRTLKEAESIAGQL 328 +DT+G+ + T++ LS M R +LAR +FA + + E +A ++ Sbjct: 314 NDTYGYESGDALLKTVSQRLSDCMSRE--DVLARLGSDEFAAVIASVGSQDEFSVLAQKM 371 Query: 329 IKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDD 387 + + +GI + G D E ++++A +A A G N++ + Sbjct: 372 LHCLTEPIQIGEQKLYCSGGMGIALFPVDGVDAEALLKNAATAMHQAKQHGSNNFRFFSK 431 Query: 388 SLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSA 445 + + T + + L L+ +P V + G + E + R VS Sbjct: 432 GMNRMAWERIEIETGLRRALDLQQLALHYQPQVDLKTGHIIGMEALLRWESPELGRVSPM 491 Query: 446 EYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRD 500 ++P+ + GL + + W +A+ ++ + F L D Sbjct: 492 RFIPLAEETGLILPIGNWVLESACRQAKAWHRAGFPSLRMAVNISARQFKQAGFIDRL-D 550 Query: 501 TLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKE 560 ++Q + + +EL E+ + + + + + G+++A++ G S++K Sbjct: 551 AIIQRSGINPELLEMELTESLIMEKSDETLMTLVDIKSRGIKLAIDDFGTGYSMLSYLKH 610 Query: 561 LNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVT 620 ++ +K+ VR+I + T++ + ++++ +V A G+ +R + L R Sbjct: 611 FPIDRIKVDRSFVRDIPENTDDAAITEAIIAMAHSLKIEVIAEGIETREQLAFLKDRACE 670 Query: 621 GGQGDFFASSQPLDTNVKKYSQRY 644 GQG +F P++T + +Q+Y Sbjct: 671 EGQGYYFGRPVPVETAAEILAQQY 694 >UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Geobacter RepID=C6E7Z7_GEOSM Length = 721 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 97/524 (18%), Positives = 199/524 (37%), Gaps = 15/524 (2%) Query: 130 YFHSLMTTAPLTGAIGFI--IVMLFLAVRWLQRQLAGQ-ELLETRATRILNGERGSNVLG 186 + +L TA +T + I F + + Q +LL + + V Sbjct: 175 FRKNLRWTATVTLLFMLVTVIAAYFFSAKLQQMISRPLLDLLSSMKDVSASKNYAIRVAK 234 Query: 187 TIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLL 246 + + +L EI+ + + ++ A D T L NR F ++LA L Sbjct: 235 PSDDEIGLLYDGFNEMLSEIEERNQILRQRQAHLQQLAHYDPLTRLPNRTLFYDRLAQAL 294 Query: 247 EDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHR 306 E+ V+ I L F ++DT GH + + N LST + +AR Sbjct: 295 NQAERNRQALSVIFIDLDHFKDINDTLGHRTGDLLLIDVANRLSTVVR--SCDTVARLGG 352 Query: 307 SDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVM 364 +F + A +A +L + IG+ + G+ ++++ Sbjct: 353 DEFTVFTQNVMNADNAAIVAAKLNALFAKPFQLGESEIYVTASIGVTLFPNDGKTVDELL 412 Query: 365 EHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-E 423 +A+ A +A G N + ++D + E V + + L R L+ +P V Sbjct: 413 MNADIAMYHAKACGKNVYKMFDRKMNEHANERVTLLSDLRLALEREEFVLHYQPKVDLLT 472 Query: 424 GQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-- 480 G V E + R ++ +++ + + G E + + W E+NL Sbjct: 473 GNVTSVEALVRWMHPRLGMLAPDKFIRLSEESGFIVELTDWVLRTACTQAKKWQEQNLGS 532 Query: 481 ---AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVN 537 A+ ++ R + + L + + IE+ E+ + Q+ + R + Sbjct: 533 VRVAVNLSPYHFQRQDVKEAIFSVL-DATGLEPALLEIEITESALMQNDEYTCALFRELR 591 Query: 538 ALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTS 597 LG+ ++V+ G S S++ + LK+ + N+ K +E+Q +V +++ + Sbjct: 592 ELGMTISVDDFGTGYSSLSYLHRFPINTLKIDRTFILNMMKSSEDQAIVTAIIAMAKSLN 651 Query: 598 TQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 Q+ A GV + + + L +G QG + ++ + ++ Sbjct: 652 MQIVAEGVETVDQLEKLKDQGCHEIQGFLVSRPVAAESVTQFFT 695 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 83/448 (18%), Positives = 176/448 (39%), Gaps = 16/448 (3%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 + ++I R+ L+ A D TGL NR ++ + + + V I Sbjct: 371 VQKDITEIRQYQEALE----RQANYDTLTGLANRNLLKERMQQAISEARRHNWTFSVAFI 426 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA 321 + +F ++D+ GHS +E L L + + G +AR +F LL ++L E+ Sbjct: 427 DIDNFKRVNDSMGHSAGDELIRLLGQRLQSCLR--DGDTVARLGGDEFVLLLTSQSLDES 484 Query: 322 ES-IAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGG 379 + ++ + IG+ + G++ + ++ +A+SA A G Sbjct: 485 IHTVVQRIRNTIINPFIITGRQLTVTCSIGLANFPHDGRNADTLLSNADSAMYQAKASGS 544 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG 438 N++ Y + + + + L L+ +P V R Q+ E + R Sbjct: 545 NNFRFYAKEMNAELGHRLSLENDLWHALENQQLVLHYQPQVCMRNSQIIGMEALIRWQHP 604 Query: 439 N-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRY-----WPEENLAIQVTVESLIRP 492 + +++P+ GL + R +P +A+ ++V L + Sbjct: 605 KLGMIPPLQFIPLSEDDGLIVPIGIWVMETAAHQNRQLQLAGYPPIRVAVNLSVRQLEQK 664 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 + TL Q + + +E+ E+ + +I + ++ LGV+++++ G Sbjct: 665 DLVHCIEKTL-QHSGLDPQCLELEITESMLMHNIEESIITLNRISDLGVQLSLDDFGTGY 723 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S S++K L + LK+ + +I + ++ +S++ QV A GV S ++ Sbjct: 724 SSLSYLKRLPINRLKIDKSFINDITTTYNDAIIARSIIALAHSLEIQVIAEGVESADQYA 783 Query: 613 TLIQRGVTGGQGDFFASSQPLDTNVKKY 640 L++ G QG + +P + Sbjct: 784 FLLENGCDEVQGYLLSRPRPFEEMEALL 811 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 77/438 (17%), Positives = 163/438 (37%), Gaps = 12/438 (2%) Query: 214 SRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTW 273 + + A D T L NR ++++ + V V + + F ++D+ Sbjct: 254 KAANEKLHYLALHDGLTRLPNRTLLEDRVDQAIRHARGVDGAFSVFFLDVDRFKPINDSL 313 Query: 274 GHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAV 332 GHS ++ + LS + P +AR +F + P + + IA ++ V Sbjct: 314 GHSTGDKVLQQMARRLSGTVG--PEDTVARIGGDEFVIVFPEQKDPGKVHEIARKIRDCV 371 Query: 333 DTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPE 391 IGI + G ++ A+SA A +G Y L + Sbjct: 372 AENMEVDGQSLSVTTSIGISLFPHDGTTFRTLLASADSAMYYAKSKGSGQIQFYSGELND 431 Query: 392 KGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNEEVSSAE-YMP 449 + + + + + LY +P VT G+V E + R + + ++P Sbjct: 432 SAALRIEMENDLRRGIEKEEFVLYYQPKVTLATGEVESVEALVRWNHPEKGILPPHYFIP 491 Query: 450 MVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQ 504 + GL R + R W + +A+ ++ I + + D L + Sbjct: 492 RAEETGLIIPLGRWIMDRACREAVIWQQAGFSRLRVAVNLSALQFINQDLMKEILDAL-E 550 Query: 505 CEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVE 564 + + +E+ E+ + + + + GV VA++ G S S++K+ ++ Sbjct: 551 SSGLPPECLELEITESLLMEDPEGAMRTLSGIRQKGVHVAIDDFGTGYSSFSYLKKFPLD 610 Query: 565 LLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 LK+ + +I + +V++++ + +V A GV S+++ + L QG Sbjct: 611 RLKIDRSFITDICDNPNDAAIVRTIITLGHNLNLKVIAEGVESQAQLEMLKAMECDAYQG 670 Query: 625 DFFASSQPLDTNVKKYSQ 642 F + P ++ + Sbjct: 671 FFNSRPLPPGELAERLKE 688 >UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=C6D7W4_PAESJ Length = 1095 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 87/460 (18%), Positives = 183/460 (39%), Gaps = 18/460 (3%) Query: 194 RTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVG 253 + S A+ + ++ + R + L A D T L NR F+ L LE + Sbjct: 482 QGSPAVIGTILDVT----ERKRAEELNAFLAYHDSLTELPNRRKFEEMLENALETAKTAR 537 Query: 254 THGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL 313 H VM + + F ++D+ GH+ ++ + L + AR +F +L Sbjct: 538 RHFAVMYLDMDRFKYINDSLGHAVGDQLLIAFSKRLQEQIRET--DFAARMGGDEFTVIL 595 Query: 314 PH-RTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESAT 371 PH R A +A ++I+ + + IGI + G D+ +M++A+SA Sbjct: 596 PHIRDNNSAIEVARRIIERTREPFYIEDYELFITTSIGISIYPNDGDDSSTLMKNADSAL 655 Query: 372 RNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRE 430 A G N + I+ S+ + + + + R +Y +P V G++ E Sbjct: 656 FRAKDLGKNGYQIFTSSMNVQTYKVFTLEKDLRKAIQRDELEMYYQPKVNIHTGEIVGAE 715 Query: 431 LMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQV 484 + R VS E++P+ + GL + + W L +I V Sbjct: 716 ALIRWNHPEWGLVSPNEFIPISEETGLILSLGNWVKRTVCRQNKEWQLAGLKPIPISINV 775 Query: 485 TVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVA 544 T + + F ++ L + + + IE+ E+ + ++ + + +N LGV ++ Sbjct: 776 TAKRFLSKDFMDAIQQILAET-GLEPHYLEIEITESSLLENAETVMHTLDSLNKLGVTIS 834 Query: 545 VNQAGLTLVSTSWIKELN--VELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYA 602 ++ G S S++K + +LK+ + ++ + +++ ++ ++++ + V A Sbjct: 835 LDDFGTGYSSLSYLKRFKHTINILKIDRSFIHDLHQGSDDNAIISAIIQLAQHMNMSVVA 894 Query: 603 TGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 GV + + L QG F+ + + + Sbjct: 895 EGVETGEQLHILKLLKCDLVQGYLFSRPVQAEAFAQLLKR 934 >UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KF61_9GAMM Length = 810 Score = 543 bits (1399), Expect = e-153, Method: Composition-based stats. Identities = 97/485 (20%), Positives = 194/485 (40%), Gaps = 21/485 (4%) Query: 175 ILNGERGSNVLGTIYEWPPR--TSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGL 232 I N + V + +S + +I +E + ++ A D T L Sbjct: 331 IWNRRKSGAVFPELLTISKIDGQNSGFVAIFTDITQLKE----TEEQLQKLAHYDPLTEL 386 Query: 233 NNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTF 292 NR + +L + ++ V + + F ++D+ GH ++ N L Sbjct: 387 PNRYLINERLQQSIRRAQRRSERLAVFFLDIDSFKNINDSLGHLAGDKLLAMTANRLREL 446 Query: 293 MMRYPGALLARYHRSDFAALLPHRTLKE-AESIAGQLIKAVDTLPNNKMLDRDDMIHIGI 351 + + R +F LL + A +IA ++I A+ + +GI Sbjct: 447 LR--DDDTVGRIGGDEFLMLLEDINSPDVATNIAEKIIGALRKPTILEGRSVSVSASVGI 504 Query: 352 CAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRG 410 + GQ E +M +A++A +A QG N++ Y ++L NV + + + SR Sbjct: 505 SIYPDDGQTAETLMSNADAAMYSAKEQGRNTFRFYSENLTRAAFQNVLIDSALREAKSRN 564 Query: 411 GPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRL 468 RL +P + + E++ R VS A+++P + GL + + + + Sbjct: 565 EFRLAFQPQIDIVTNSLLGLEVLLRWHHPTLGTVSPAQFIPQAERTGLIRDIGQWVLEQA 624 Query: 469 IPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVG 523 W E L A+ V+ F +R L + R+ +EL E+ + Sbjct: 625 CLQGNKWLAEGLPFGRLAVNVSAPQFRAEDFVDQVRQVL-EYANFPPNRLELELTESVLV 683 Query: 524 QHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQ 583 Q +L + + A+G++ A++ G S S++K++ ++ LKL V NI ++ Sbjct: 684 QDTEQLIGNMDELRAMGIQFAIDDFGTGYSSLSYLKKMPIDRLKLDKSFVDNISTDDNDR 743 Query: 584 LLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQ---PLDTNVKKY 640 ++ +++V +V A G+ + + L G T QG + ++ ++K Sbjct: 744 IIAEAVVALGQAMGLEVIAEGIEYEEQARALRDIGCTQFQGFLYGMPMYTSRIEGVLRKE 803 Query: 641 SQRYS 645 +QR + Sbjct: 804 AQRKT 808 >UniRef50_C4KCC9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4KCC9_THASP Length = 748 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 102/489 (20%), Positives = 194/489 (39%), Gaps = 22/489 (4%) Query: 168 LETRATRILNGERGSNVLG-----TIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRS 222 L R+ R GE GS + + + R L + R+I + R + +I Sbjct: 250 LRLRSRRDGGGEGGSVTVSLTGIPMVTQENDRRVIGLYGVARDIS----ERKRAEEIISF 305 Query: 223 YAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQF 282 A D T L NR+ F ++L + ++ VM I + F +++DT+GH++ + Sbjct: 306 QAYHDQLTHLPNRVLFKDRLELAIAQAQRRTGALAVMFIDIDRFKLVNDTFGHAEGDLLL 365 Query: 283 FTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIKAVDTLPNNKML 341 + + LS + R G LAR +F LLP ++AE IA +++ A+ T Sbjct: 366 RAIASRLSATLRR--GDTLARLGGDEFTVLLPDINQPEDAEVIARKVLDALATPVRLSQG 423 Query: 342 DRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWR 400 + + +GI + G E + HA++A G N++ +D L + R + Sbjct: 424 EFRATVSVGIALFPRDGTTAEDLTRHADAAMYQVKRSGKNAFRFFDPELNTRHRDRIALE 483 Query: 401 TLIEQMLSRGGPRLYQKPAVTREGQ-VHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSE 458 + ++RG L+ +P V+ + + E + R + A ++ + + GL Sbjct: 484 NDLRGAVARGELDLHYQPQVSLATRGIVGLEALLRWNHPGLGAIPPATFIQVAEEVGLIS 543 Query: 459 EYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRI 513 E + L W E ++I ++ R +R L + + Sbjct: 544 EISNWVLETACAQLARWQAEGVGAPRVSINLSACDFQRGDVVGRIRACLDR-HGVAPSCL 602 Query: 514 IIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLV 573 +E+ E + + + +R + G+ VA++ G + ++++ V LK+ V Sbjct: 603 EVEITEGLMMDDTADIAAKVRALREAGISVAIDDFGTGYSALAYLQRFPVSTLKIDRSFV 662 Query: 574 RNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 R++E N ++ ++ G + A GV + + L G QG FA P Sbjct: 663 RDLEGPMTN-PIISAITGIARGFDLDLVAEGVENLEQADALRALGCEVMQGYLFARPAPA 721 Query: 634 DTNVKKYSQ 642 Q Sbjct: 722 GEVPGWLRQ 730 >UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQL8_BACS4 Length = 1016 Score = 542 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 86/486 (17%), Positives = 195/486 (40%), Gaps = 21/486 (4%) Query: 176 LNGERGSNVLGTIYEWPPRTSSA-LDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNN 234 + GE+ + + R + ++ I N E+ + + I A D TGL N Sbjct: 534 IQGEKEGEMWVYLTGDSIRDENGQAIRIIGSITNISEK-KQQEKQIMHLAFHDGLTGLPN 592 Query: 235 RLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMM 294 R ++L + D ++ +++I L F +++DT GH +E + ++L M Sbjct: 593 RRLLRSRLELAMTDADRYNYKLGLLLIDLDRFKVINDTLGHQAGDELIQKVADVLELTMR 652 Query: 295 RYPG--------ALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPNNKMLDRDD 345 +AR +F LL H + + ++ A +I+ + D Sbjct: 653 SPDTHSRAKQEHTTVARLGGDEFIILLTHITDVSDLQASANLIIEKFKEPFFIQNQDVFT 712 Query: 346 MIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIE 404 IGI + G+D + + +A+ A A G N +Y + + + Sbjct: 713 SASIGISVYPDHGRDYDSLTGNADIAMYRAKENGKNQMEMYSSEINTLTMERFQMENQLR 772 Query: 405 QMLSRGGPRLYQKPAVTREG-QVHHRELMCRIFDGNEEV-SSAEYMPMVLQFGLSEEYDR 462 + L R L+ +P E +V E + R + + S E++P+ + GL Sbjct: 773 KALEREEFVLHYQPQFHLENNEVLGIEALLRWNSSDRGIVSPMEFIPLAEETGLIIPIGY 832 Query: 463 LQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIEL 517 + + W ++ +++ ++ L F + ++ L + + + +E+ Sbjct: 833 WVLKEACRQNKRWMDQGHRPKIVSVNISARQLQEKDFVQAVKSILEDTQ-LPTQYLCLEI 891 Query: 518 AEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIE 577 E+ ++I +++ + LG+++A++ G S + +K+L + +K+ +R+++ Sbjct: 892 TESTAIKNIDISMNMLKELGELGIKIAIDDFGTGYSSLAMLKQLPISNIKIDKSFIRDMD 951 Query: 578 KRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNV 637 ++ +V++++ V A GV + + L+Q QG ++ P + Sbjct: 952 VDKDDGAIVRAIIAMAHSLELTVTAEGVETEDQKNILLQEKCNYLQGYLYSKPLPAEE-C 1010 Query: 638 KKYSQR 643 ++ Q Sbjct: 1011 LRFVQE 1016 >UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIL1_9PROT Length = 576 Score = 542 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 79/451 (17%), Positives = 180/451 (39%), Gaps = 16/451 (3%) Query: 199 LDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIV 258 L + +I + R + I A D+ TGL NR +++ LE + + Sbjct: 130 LIGMFVDIT----ERHRAEQRILEMATYDILTGLPNRALLKDRIERALEHGNRNRQRVAL 185 Query: 259 MMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL 318 + I L +F +++D+ GH ++ + + + +AR +F LL + Sbjct: 186 LFIDLDNFKVINDSLGHDVGDKLLQAVAARFVSIVRGE--DTVARQGGDEFIVLLSNLES 243 Query: 319 K-EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGL 376 +AE++A +++ A+ + IGI + G+D ++ +++ A +A Sbjct: 244 AFDAEAVAQKILNALQLHFLIDGKELHISGSIGISLFPDDGEDIWTLLRNSDIAMYHAKK 303 Query: 377 QGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREG-QVHHRELMCRI 435 G N+ + + + + + L R L+ +P V G + E++ R Sbjct: 304 NGRNNCEFFKPEMNRQAKERHSMEVALRNALKRDELLLHYQPIVNVNGGKADGFEVLLRW 363 Query: 436 FDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESL 489 + +++ + + G+ + + ++ W E+ LAI ++ Sbjct: 364 QHPGDGLIYPVKFIRLAEETGMIIPIGEWLMRQSCLQIKAWQEQGYEVPRLAINLSAIQF 423 Query: 490 IRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAG 549 + + L + + +E+ E+++ + + +R ++ LG+ ++++ G Sbjct: 424 RQKTLMENIVRILDET-GVTGHYLTLEITESELIEDVEETIKTLRQLSELGIEISIDDFG 482 Query: 550 LTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRS 609 + S++K + LK+ VR+I ++ ++ +++ QV A GV + Sbjct: 483 TGYSNLSFLKRYQINTLKIDRSFVRDIPDDPDDTAIIDAILVMAHALGLQVIAEGVENEQ 542 Query: 610 EWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 + L G T QG +F+ P KK Sbjct: 543 QLAYLALHGCTRFQGFYFSKPLPAIEIEKKM 573 >UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q478F7_DECAR Length = 739 Score = 542 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 84/453 (18%), Positives = 175/453 (38%), Gaps = 22/453 (4%) Query: 203 LREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIR 262 +I N + ++ I A D T + NR N+L ++ G G +++I Sbjct: 274 FSDISNLKV----AESEIHHLAFYDPLTAMPNRRLLLNRLDQACVSAKRSGQFGALLIID 329 Query: 263 LPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE-- 320 + F L+DT GH + + LS + G AR +F +L ++ Sbjct: 330 IDHFKTLNDTLGHDVGDHLLVEVARRLSACIRE--GDTAARQGGDEFVVMLEELGSEQEG 387 Query: 321 ----AESIAGQLIKAVDTLPN-NKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNA 374 AE +A ++ + N + IGI + + + +++ A+ A A Sbjct: 388 AAVQAEIVAEKIRLELARPYLLNGDTEYFRSASIGISLFFGQEKTIDILLKQADIALYKA 447 Query: 375 GLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCR 434 G N+ +D ++ + + L R LY +P V ++ E + R Sbjct: 448 KDAGRNAIRFFDTAMQTTLDERAELEAGLRRALVRDEFVLYVQPQVDAVRRLIGAEALLR 507 Query: 435 IFDGNE-EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN------LAIQVTVE 487 V+ +++P+ + GL + + LR W ++ L++ V+ Sbjct: 508 WQPPGRAMVAPNDFIPLAEETGLIVPIGIWVLDQACAELRRWADDPRSASLFLSVNVSAR 567 Query: 488 SLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQ 547 + F + D L + + + + +EL E+ + ++ + ++ + +GVR +++ Sbjct: 568 QFRQADFVAQVADALAR-HGANPRLLKLELTESLLLDNVEEVIEKMQALRTIGVRFSLDD 626 Query: 548 AGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRS 607 G S S++K E LK+ +R+I ++ +V++++ + V A GV Sbjct: 627 FGTGYASLSYLKRFPFEQLKVDRSFIRDININPDDAAIVRAIIAMGNTLRLSVVAEGVED 686 Query: 608 RSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 + L++ + QG F D Sbjct: 687 DLQHAYLVKHECSLFQGYLFGRPMSFDDFRASL 719 >UniRef50_C7RVM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RVM5_9PROT Length = 708 Score = 542 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 93/479 (19%), Positives = 187/479 (39%), Gaps = 25/479 (5%) Query: 175 ILNGERGSNVLGTIYEWPPRTSSALDTL-----LREIQNAREQHSRLDTLIRSYAAQDVK 229 I N + + + +S T +I ++ + I A D Sbjct: 227 IWNKRKSGQIYAELLTITAIVASGGITTHYVASFSDITEDKQ----AEAEIHRLAYYDAL 282 Query: 230 TGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLL 289 T L NR ++L L + G +G + I L +F L+DT GH + + L Sbjct: 283 TRLPNRRLLQDRLGQALAAAARHGLYGALFFIGLDNFKTLNDTRGHDVGDLLLVEVAQCL 342 Query: 290 STFMMRYPGALLARYHRSDFAALLPHRT--LKEAESIA----GQLIKAVDTLPNNKMLDR 343 + G +AR +F LL + EA ++A +L +A + + Sbjct: 343 RAQVRE--GDTVARLGGDEFVLLLDGVSGNADEAAAVAKEVGDKLREATSRPFSLDGQEY 400 Query: 344 DDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLI 403 + IG+ + + E++ + A+ A A G + +D ++ + + Sbjct: 401 RCKLSIGVSLFAALDTVEELFKRADLALYQAKNAGRDRLRFFDPAMQAAMDLRGALESDL 460 Query: 404 EQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDR 462 Q L+ RL+ +P + G+V E + R + VS E++P+ GL R Sbjct: 461 HQALALDQLRLHYQPQIDTAGRVIGVEALLRWWHPQRGLVSPNEFVPLAESTGLILPIGR 520 Query: 463 LQISRLIPLLRYW------PEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIE 516 + L++ W +A+ V+ + F ++ +L + + R+ +E Sbjct: 521 WILETSCVLIKNWESDACTRSLQVAVNVSARQFRQADFVEQVKRSL-KASGANPARLKLE 579 Query: 517 LAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNI 576 L E+ + +++ + + LGV +++ G S S++ +L ++ LK+ VR + Sbjct: 580 LTESVLLKNVEDTIAKMLAIKRLGVAFSLDDFGTGYSSLSYLAQLPLDQLKIDQSFVRKL 639 Query: 577 EKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDT 635 + + + ++++ V A GV S ++ Q L G QG F+ P++ Sbjct: 640 PGARKEETIARTIITMGRELDMNVIAEGVESEAQRQFLEAHGCHAFQGYLFSRPLPVEH 698 >UniRef50_C5V567 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V567_9PROT Length = 927 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 93/475 (19%), Positives = 193/475 (40%), Gaps = 25/475 (5%) Query: 181 GSNVLGTIYEWPPRTSS--ALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFF 238 G L ++ P S L ++ +I R L+ + A D+ T L NR Sbjct: 449 GEVRLVEVHSSPVEVDSRPLLFFIVHDITERR----HLEEKMHDLAFYDLLTKLPNRRLL 504 Query: 239 DNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPG 298 ++L L + H +M + L F +L+D GH ++ + N + + Sbjct: 505 LDRLEKALLSGTRSRHHSALMFLDLDHFKVLNDLHGHDIGDQLLVEVANRILGCIREQDS 564 Query: 299 ALLARYHRSDFAALLPHRTLK------EAESIAGQLIKAVDTLP----NNKMLDRDDMIH 348 A AR+ +F ++ + +A+S+A ++ A+ +++ Sbjct: 565 A--ARFGGDEFVVMIEDLSENLSDAVNQADSVAEKIRCALAAPYLLKRGEEVISHHCSSS 622 Query: 349 IGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQML 407 IG+ +R + + EQ+++ + A +A G N +D + + L Sbjct: 623 IGVTLFRDHEENLEQLLKWTDMAMYHAKDAGRNVIRFFDPVMQTAIENRAALENDLHTAL 682 Query: 408 SRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEE-VSSAEYMPMVLQFGLSEEYDRLQIS 466 L+ + V R+G+ E++ R VS A+++P+ GL + Sbjct: 683 EERQFELFYQIQVDRDGRAEGAEVLLRWRHPQRGLVSPAQFIPLAEDTGLIVPIGEWVLD 742 Query: 467 RLIPLLRYWPEEN----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADV 522 + + W E +A+ V+ + + F ++ + + + S + +EL E+ V Sbjct: 743 TVCAQIAKWQGEQRNLVIAVNVSAKQFRQSNFVELVQQIIQRHQVSPA-LLKLELTESLV 801 Query: 523 GQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTEN 582 +I ++++ A GV +++ G S S++K+L ++ +K+ VR+I + Sbjct: 802 LDNIQDTIDKMKVLKAFGVSFSMDDFGTGYSSLSYLKQLPLDQIKIDQSFVRDIATDKTD 861 Query: 583 QLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNV 637 ++V+++V+ V A GV S + L Q G + QG F+ P++ Sbjct: 862 LVMVKTIVDLGVNFEMDVIAEGVESEVQLGLLKQCGCSRFQGYLFSKPVPVEAFE 916 >UniRef50_C0QA93 Signal transduction family protein (GGDEF domain protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QA93_DESAH Length = 629 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 91/470 (19%), Positives = 188/470 (40%), Gaps = 17/470 (3%) Query: 193 PRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKV 252 P + + L + E ++ + + A D TGL NR F L T L+ + Sbjct: 145 PFDNVEVLQLAHALTRKWELNNEIQGRLNQLAFYDSLTGLPNRTLFIENLTTTLDKAHRY 204 Query: 253 GTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYP-------GALLARYH 305 ++ I L +F ++DT GHS ++ + L + G ++AR Sbjct: 205 KHKAALLYIDLDNFKRINDTLGHSIGDDLLKATSKRLLKCLRTSDTVSRSPAGEMVARLG 264 Query: 306 RSDFAALLPHRTLKE-AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQV 363 +F +LP T E A +A ++ K + + IGI + G+D E + Sbjct: 265 GDEFTVILPEVTRAEHAGVVALRIAKQLAEPLHLGNHQVIVTPSIGISLFPQDGEDIETL 324 Query: 364 MEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR- 422 +++A+ A + G N ++ Y+ S+ + + Q L RG L+ +P Sbjct: 325 LKNADIAMYFSKRMGPNMFSFYEQSMNADALKRMTIENHLRQALGRGEFALHYQPQFDLV 384 Query: 423 EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL- 480 G+V E + R + V E++ + + G+ + R W ++ L Sbjct: 385 TGEVCGAEALLRWHNWELGNVPPIEFISIAEENGMIVAIGEWVMRTACRQTRTWLDQGLP 444 Query: 481 ----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLV 536 A+ V+V F ++ L + + + IE+ E+ + +++ ++ + Sbjct: 445 LQRIAVNVSVNQFTHTDFLNMVKSILEETT-LDPQYLEIEITESLLVKNVPETTNILHAL 503 Query: 537 NALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGT 596 + +R+A++ G S S +KE+ ++ LK+ V I +Q ++ +++ G Sbjct: 504 KKMNIRIAIDDFGTGYSSMSRLKEIPIDCLKIDKTFVDGIAIGKRDQSIITAIIAMAEGM 563 Query: 597 STQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV 646 + ++ A GV + + L + QG F+ + + +S+ Sbjct: 564 NLRLIAEGVETTGQVDFLRVKQCQEVQGYLFSKPLSTQQVEVFFQKAFSL 613 >UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HTT7_9BACT Length = 860 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 96/488 (19%), Positives = 203/488 (41%), Gaps = 20/488 (4%) Query: 165 QELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYA 224 + ++ R + + + +++ P + S + +LR++ + + + A Sbjct: 378 SRIWDSVGQRFDHTQFPMEISSSVFSEP--SGSFVTLVLRDLTERKT----FENQLLYLA 431 Query: 225 AQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFT 284 D TGL NR+ +L + E+ G H ++ + L F ++D+ GH+ + Sbjct: 432 NYDALTGLPNRIHLIERLKQAIPLAERNGQHLALLFLDLDRFKGVNDSLGHASGDLLLVE 491 Query: 285 LTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL-KEAESIAGQLIKAVDTLPNNKMLDR 343 ++ LS + + G +AR+ +F LL ++A+ IA +++ A++ + Sbjct: 492 VSKRLSNCVRK--GDTVARFGGDEFVFLLEGLEEREDAKPIAEKILGALNAPFEIDNVQV 549 Query: 344 DDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTL 402 IGI W G+ ++ ++ A++A A G NS+A Y+ + Sbjct: 550 FMNGSIGISTWPHDGESSDLLLRRADAAMYRAKELG-NSYAFYNPEIGALPERRFSMERE 608 Query: 403 IEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEY 460 + + L R L+ +P + G E + R + +++P+ GL Sbjct: 609 LRRALERNEFELFFQPQIDLATGNCVGAEALIRWRHPEKGLILPDQFIPVAESTGLIVPM 668 Query: 461 DRLQISRLIPLLRYWPEENLA-----IQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIII 515 I P L+ W E +A + V+V+ R + L ++ + + + I Sbjct: 669 GAWVIRSACPHLKSWREAGMAPLRLTVNVSVKQFERGGLIQTLESSMRE-SGVDSRLLEI 727 Query: 516 ELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRN 575 E+ E+ + QH +R ++ +G+ ++++ G S S++K+L V LK+ V Sbjct: 728 EVTESVLMQHP-MASDTLRELSRMGILISIDDFGTGYSSLSYLKKLPVYKLKIDRSFVTT 786 Query: 576 IEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDT 635 + + + ++V S + A GV SR + L + G QG +++ P DT Sbjct: 787 LPVDPDMLAITTAIVTMGSALRLKTIAEGVESREQLDILRRLGCDEIQGYYYSRPLPNDT 846 Query: 636 NVKKYSQR 643 + ++ Sbjct: 847 FMTWVREK 854 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 80/490 (16%), Positives = 188/490 (38%), Gaps = 16/490 (3%) Query: 155 VRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHS 214 +R R+ +L + + + + + +L ++ + Sbjct: 324 LRAAIREQRPASVLLRNYHKDGSMFLNELYIAPVSDTSGGAVGHFVGVLYDVTQIK---- 379 Query: 215 RLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWG 274 R + A D TGL NR + + L + ++ I L +F +++D+ G Sbjct: 380 RYQEDLEHQANYDTLTGLANRNLLNERTQQALLQARRHDHFLSLVFIDLDNFKLVNDSMG 439 Query: 275 HSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAES-IAGQLIKAVD 333 H +E + + L T + G +AR +F LL ++++ ++ + + ++ + Sbjct: 440 HGAGDELIANVGSRLQTCVR--DGDTVARIGGDEFVLLLTNQSVSDSNAGVMQRIQAELI 497 Query: 334 TLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK 392 + + +G+ + G+D+E ++ +A++A A G N++ Y + Sbjct: 498 KPMWIRGQEIVVTCSMGVARFPEDGEDSESLLANADTAMYRAKSSGRNNFQFYTKEMNAT 557 Query: 393 GRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG-NEEVSSAEYMPM 450 + + + L L +P + R+G V E + R ++ +++PM Sbjct: 558 SGERLSLESDLWHALKNDELFLVYQPQIDLRDGTVIGMEALIRWQHPKRGLIAPMDFIPM 617 Query: 451 VLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQC 505 GL + +E L AI ++ L F ++ + + Sbjct: 618 AECNGLIIPIGIWVLETACRHNLQLQKEGLPPIRVAINLSARQLSDRNFVESVQSVI-EA 676 Query: 506 EKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVEL 565 + +E+ E+ V ++ + + +N +G++++++ G S +++K ++ Sbjct: 677 IGLDPHYLELEVTESMVMHNVEDVVVTLNDLNKMGIQLSLDDFGTGFSSLAYLKRFPIDR 736 Query: 566 LKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGD 625 LK+ + N + + ++ Q+++ G +V A GV L + G GQG Sbjct: 737 LKIDQSFIFNCDSDPGDAIIAQTIIALAHGLKIKVIAEGVEKSEHLSFLKKNGCDEGQGY 796 Query: 626 FFASSQPLDT 635 F + D Sbjct: 797 FISRPLTFDD 806 >UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUR6_PELPD Length = 729 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 89/456 (19%), Positives = 181/456 (39%), Gaps = 16/456 (3%) Query: 199 LDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIV 258 + TL +I R + + I+ A D T L NR+ F ++L + + V Sbjct: 281 VATLFEDITERR----KSEQQIQHMAYFDSLTDLPNRVLFLDRLRQAIAHALRDENSLAV 336 Query: 259 MMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL 318 + + L F ++DT GHS ++ +T L + LAR +F ++ Sbjct: 337 LFLDLDRFKDINDTLGHSAGDQLLIQVTRRLGRQIR--SCDTLARLGGDEFVVIVTDLGK 394 Query: 319 K-EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGL 376 K A +A LI A+ + IGI + G + E +++HA+ A ++ Sbjct: 395 KMNATRVAQDLINAIQPPFLIAGRELHVTTSIGIALFPDDGNNAETLVKHADLAMYSSKE 454 Query: 377 QGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRI 435 G N + Y S+ +K + + L R + +P + + V E + R Sbjct: 455 SGRNRYNFYSASMNQKALMRMETEAGLRNALERREFYVEFQPIMNAADSTVVAAEALVRW 514 Query: 436 FDGNEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESL 489 + +++ + + GL + + ++ W + L ++ V+ + Sbjct: 515 NHPTRGRIPPDQFIDLAEETGLVVPLGEWVLRTVCSRIKTWSDAGLPLIRFSVNVSSRQI 574 Query: 490 IRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAG 549 R F +R+ L + + ++ IEL E+ + +H + + GV A++ G Sbjct: 575 ERQDFAEIVRNALRE-SGANSAQLEIELTESCLIRHSDTNISDLFGLKEWGVSFAIDDFG 633 Query: 550 LTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRS 609 S +IK L ++ +K+ VR+I +Q +V++++ + A GV + Sbjct: 634 TGYSSLGYIKTLPIDHIKIDRSFVRDISTDFHDQAIVEAIIAMSQRLGIRNIAEGVETIE 693 Query: 610 EWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYS 645 + + L +RG QG +F + + + + Sbjct: 694 QVRFLQERGCEEIQGYYFHRPLSAEALEELLRAQEN 729 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 88/454 (19%), Positives = 172/454 (37%), Gaps = 15/454 (3%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 L +I +EQ + IR A D T L NR ++LA + + V+ Sbjct: 606 ALFSDISERKEQ----EAHIRHMAEHDFLTDLPNRALIHDRLAQAIRAAARQKNRLAVLF 661 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLK 319 + L F ++DT GH+ +E + L + + R +F ++P + Sbjct: 662 LDLDHFKNINDTLGHAHGDELLKQVAQRLQHTVR--GSDTVGRNGGDEFVLIVPELASPA 719 Query: 320 EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQG 378 EA +A +L+ + IGI + G + ++++ A+ A +A QG Sbjct: 720 EAAQLAQRLLDDLRRPFQIDGQALAISTSIGISLFPDNGSELQELLVSADLAMYHAKAQG 779 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQ-VHHRELMCRIFD 437 N + + L + + + Q L R L +P + + + E + R Sbjct: 780 RNRYQFFTPELNAQVAERLTLENHLRQALERQQLYLVYQPQFAIDNRRLVGCEALLRWQH 839 Query: 438 G-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN----LAIQVTVESLIRP 492 +S A ++P+ + GL E R + W +A+ V+ L +P Sbjct: 840 PEQGLISPARFIPLAEETGLIVEIGRWVLDEACRQAAAWLAAGTPLRVAVNVSARQLGQP 899 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 + L + + + +E+ E+ + + + ++ G+ +AV+ G Sbjct: 900 DLLAEVEAALAR-HRLPSCWLELEVTESTLMEDAEQAVRHLQAFKERGIHLAVDDFGTGY 958 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S +++K + +L+K+ V N+ ++ +V ++V+ Q A GV S + Sbjct: 959 SSLTYLKRFSPDLIKIDRAFVMNLPDNRDDAAIVSAIVQLAEALGMQTLAEGVESEEQLD 1018 Query: 613 TLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV 646 L Q G QG Q + + SV Sbjct: 1019 FLAQAGCDVVQGYLTGRPQSAGELTAQLAGANSV 1052 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 81/463 (17%), Positives = 177/463 (38%), Gaps = 12/463 (2%) Query: 178 GERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLF 237 + G ++ +++ + I +H + + I A D T L NR Sbjct: 381 KKHGELFWTSLSLSAIKSNEGFISHYLAIMEDITEHKQAEERIHYLAYYDSLTALPNREL 440 Query: 238 FDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYP 297 F ++L + + V I + F ++DT GHS + + + L + + Sbjct: 441 FHDRLNMAIIHAHRKQQMLAVAFIDIDRFKKVNDTLGHSTGDRLLKIIADRLKSCIREE- 499 Query: 298 GALLARYHRSDFAALLPHRTL-KEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR- 355 ++R +F LL + ++A + +++K + D IGI + Sbjct: 500 -DTVSRQGGDEFVLLLTEISRMEDANDVTQRILKKLKEPVIIDDHDLCISASIGIALYPG 558 Query: 356 SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLY 415 G E ++++A+SA + G +++ Y ++ EK + + + L LY Sbjct: 559 DGTTAEALLKNADSAMYISKESGRDNYHFYSSTVQEKAYEQLLEEMYLRRALENRELVLY 618 Query: 416 QKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLR 473 +P V G++ E + R +S AE++P+ G D + Sbjct: 619 YQPQVNIATGRLVGMEALLRWKHPKKGLISPAEFIPLAEDTGQIVPIDFWVLHTACKQNM 678 Query: 474 YWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISR 528 W L A+ ++ + R ++ + L S + +E+ E Q++ Sbjct: 679 AWQRAGLPSVPIAVNISGHTFGRENLIDFVNNVLHDTRMSP-DALDLEITEGIAIQNLQT 737 Query: 529 LQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQS 588 + + +LG+++ ++ G S S++ + ++ LK+ + N+ K N +V++ Sbjct: 738 TIYKLNKLKSLGIQITIDDFGTGFSSLSYLSKFPIQKLKIGMTFIHNLHKDPTNSAIVKA 797 Query: 589 LVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQ 631 ++ V A GV + +++ L QG + + Sbjct: 798 VIAMAKSLQLTVIAEGVETDEQFEFLQGLQCDEFQGYLCSKAV 840 >UniRef50_Q21RL1 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=2 Tax=Proteobacteria RepID=Q21RL1_RHOFD Length = 853 Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 109/487 (22%), Positives = 198/487 (40%), Gaps = 19/487 (3%) Query: 163 AGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRS 222 G+ + +R L+G R L + P R L I +H R + I Sbjct: 372 NGERVEADEVSRSLDGSREQTYLSI--KLPLRQPDGSIYALCGISTDITEHKRSEDAIHQ 429 Query: 223 YAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQF 282 A D T L NR F +L L+ E+ G ++ I + +F L+DT GH+ +E Sbjct: 430 LAFYDPLTLLPNRRFLMERLQQTLKANERQQQCGALLFIDVDNFKDLNDTLGHAMGDELL 489 Query: 283 FTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT------LKEAESIAGQLIKAVDTLP 336 + LST LAR +F LL + L++ +A ++++ + Sbjct: 490 RQMAVRLSTCTRAE--DTLARQGSDEFVLLLCDLSPDLDAALEQTRHVAQKILQHIAEPY 547 Query: 337 NNKMLDRDDMIHIGICAWRSG-QDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRG 395 + + IGI + +++ + A+ A A +G N+ ++ ++ + Sbjct: 548 LLETRHYQSTVSIGIAMFGDTPTSRDELFKQADLAMYRAKAEGRNALCFFNPAMQAQVTA 607 Query: 396 NVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEE-VSSAEYMPMVLQF 454 + Q L+R LY +P V +GQ E + R V E++P+ Sbjct: 608 RTAIEADLHQALARSEFVLYYQPQVNIDGQQFGVEALVRWQHPQRGLVPPLEFIPIAEST 667 Query: 455 GLSEEYDRLQISRLIPLLRYW---PEE---NLAIQVTVESLIRPRFQRWLRDTLMQCEKS 508 GL R +S L W PE+ ++A+ V+ + F + + L + Sbjct: 668 GLILPLGRWILSTACRQLVAWAASPEQAHWSIAVNVSARQFRQSDFVQTVEQVLRDT-GA 726 Query: 509 QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKL 568 +R+ +EL E+ + + + + + ALGVR +++ G S S +K L ++ LK+ Sbjct: 727 NPQRLELELTESLLVDDVEVVIARMSALKALGVRFSLDDFGTGYSSLSMLKRLPLDQLKI 786 Query: 569 HPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFA 628 VR++ ++ +V+++V + QV A GV + + L+ G T QG F Sbjct: 787 DRSFVRDLRHDPQDANIVKAIVTLGFAMNLQVIAEGVETAEQRDALVNLGCTHFQGYLFG 846 Query: 629 SSQPLDT 635 P Sbjct: 847 RPAPAPA 853 >UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodoferax ferrireducens T118 RepID=Q21R50_RHOFD Length = 1052 Score = 541 bits (1394), Expect = e-152, Method: Composition-based stats. Identities = 103/507 (20%), Positives = 187/507 (36%), Gaps = 24/507 (4%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLG-TIYEWPPRTSSALDTLLREIQNAR 210 F A W G E R NGE L + + P ++ ++ + Sbjct: 553 FYAAMWDSLVREGAWQGEI-WNRRKNGEVFPEWLTISAVKDPAGQATHYVATFTDLSTRK 611 Query: 211 EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLS 270 + I+S A D TGL NR ++L L + G ++ I L DF L+ Sbjct: 612 S----AEDQIKSLAFYDTLTGLPNRRLLLDRLKQALASGARHRRQGALLYIDLDDFKTLN 667 Query: 271 DTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT------LKEAESI 324 +T+GH ++ + LS ++ G +AR F LL + EAE+ Sbjct: 668 NTYGHDVGDQLLQEVAQRLSHYLR--AGDTVARPGGDSFVVLLEALSTNSVEAATEAENT 725 Query: 325 AGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQD--TEQVMEHAESATRNAGLQGGNSW 382 ++ A+ IG+ + Q ++ ++ AE A A G N+ Sbjct: 726 GEKIRLALSQPYQIADHAHRSTASIGVTLFDDRQQEGIDEPLKRAELAMYQAKTAGRNTL 785 Query: 383 AIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NEE 441 +D + + + + LY + V+ E QV E + R Sbjct: 786 RFFDPQMQTAVMAMAALEADLREAVRSNQFLLYYQAQVSGERQVAGVEALVRWQHPVRGL 845 Query: 442 VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE------NLAIQVTVESLIRPRFQ 495 V AE++P+ Q GL + + L W + +A+ V+ + F Sbjct: 846 VPPAEFIPLAEQTGLILPLGQWVLETACAQLAAWASQPERAHLTVAVNVSALQFHQADFV 905 Query: 496 RWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVST 555 + L + + +R+ +EL E+ + + + + GV +++ G S Sbjct: 906 AQVLAALKRA-GANPQRLKLELTESLLVHDAEDVIAKMITLKEQGVGFSLDDFGTGYSSL 964 Query: 556 SWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLI 615 S++K L + LK+ G VR+I + + + +V V A GV + ++ L Sbjct: 965 SYLKRLPLNQLKIDQGFVRDILHDANDAAIAKMVVALADTLGLSVIAEGVETEAQRDFLA 1024 Query: 616 QRGVTGGQGDFFASSQPLDTNVKKYSQ 642 +G QG ++ + P+D Q Sbjct: 1025 AQGCHAYQGHLYSRALPIDAFEAFMRQ 1051 >UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39WZ5_GEOMG Length = 739 Score = 541 bits (1394), Expect = e-152, Method: Composition-based stats. Identities = 89/495 (17%), Positives = 194/495 (39%), Gaps = 17/495 (3%) Query: 158 LQRQLAGQELLETRATRILNGERGSNVLGTIY-EWPPRTSSALDTLLREIQNAREQHSRL 216 LQR ++G L A R V G++ SS + ++ R+I + Sbjct: 244 LQRVVSGDALSPMEAVFTAKDGRSVIVEGSLSCAHGGDESSVIWSICRDIT----ERKHA 299 Query: 217 DTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHS 276 + + A D TGL NR+ F ++L + V+ + L F +++DT GH Sbjct: 300 EEQLYRLAHHDTLTGLPNRILFMDRLQQAKALANRYRYQVAVLFLDLDRFKIINDTLGHP 359 Query: 277 QVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIKAVDTL 335 + + + ++ + +AR +F +L + +++ + + +++K + Sbjct: 360 VGDHLLQQVAHRIAGCVREV--DTVARIGGDEFTIILVNVDTVEDVKRMGQKILKTLAAP 417 Query: 336 PNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGR 394 N + IGI + G + +Q+++ A+ A +G N+ Y + Sbjct: 418 FNIDTHELFVTASIGISLFPSDGDNLDQLVKKADIAMYCVKGEGRNNVQFYSPQMDANAD 477 Query: 395 GNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDG-NEEVSSAEYMPMVL 452 + T + + L R+Y +P V ++ E + R VS E++P+ Sbjct: 478 KRLLLETSLRKALDNREFRVYYQPKVDIVSKRITAMEALIRWDHPILGLVSPGEFIPLAE 537 Query: 453 QFGLSEEYDRLQISRLIPLLRYW-----PEENLAIQVTVESLIRPRFQRWLRDTLMQCEK 507 + GL + W P +A+ ++ + +R L + Sbjct: 538 ETGLIIPIGEWVLRAACFQNCEWVRQGIPPMRVAVNLSGYQFQQKNLLETIRGILDET-G 596 Query: 508 SQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLK 567 + +E+ E+ + Q+ V+ + LGV ++++ G+ S + +K +V LK Sbjct: 597 LTADLLELEITESVIMQNPDFAVSVLNQLRDLGVHISIDDFGIGYSSLAHLKRFSVNTLK 656 Query: 568 LHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFF 627 + VR++E + + + +++ + + +V A GV + + L QG F Sbjct: 657 IDKSFVRDVEINSADAAIATAIIAMGNSLNLKVIAEGVETEGQLSFLSDNKCDEVQGYLF 716 Query: 628 ASSQPLDTNVKKYSQ 642 ++ P + + + Sbjct: 717 STPMPPEKVAEFMRE 731 >UniRef50_C0QDV9 GGDEF domain family protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QDV9_DESAH Length = 708 Score = 541 bits (1394), Expect = e-152, Method: Composition-based stats. Identities = 80/478 (16%), Positives = 198/478 (41%), Gaps = 24/478 (5%) Query: 186 GTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATL 245 G ++ + +++++ ++ R IR A D TGL NR+ F ++L T Sbjct: 235 GEVFVDDNGVPEIMLGVVQDLSQLKQAEER----IRFLAFYDGLTGLANRMLFMDRLDTQ 290 Query: 246 LEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYP-------- 297 ++ + + + L F ++DT GH + T+ L + + + Sbjct: 291 IKKATRYNQKFALFFLDLDQFKKINDTLGHHIGDLLLKTVAETLKSCIRKTDTAARRDKD 350 Query: 298 --GALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAW 354 G+++AR +F LL + + + IA +++ A+ + + + IGI + Sbjct: 351 ESGSMIARLGGDEFTVLLSDIKSPENSAIIAQRILDAIPEAYSIEGKEVSVTTSIGISVF 410 Query: 355 R-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPR 413 G E ++++A+SA +A +G N++ Y +SL +++ +R Sbjct: 411 PADGSTPETLLKNADSAMYHAKDRGKNNYQFYMESLNRAAIERFSMERDLKKSFARDELV 470 Query: 414 LYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPL 471 LY +P + + ++ E + R + + +++P+ + GL + ++ + Sbjct: 471 LYYQPQIRFADRKIVGAEALIRWIHPHKGMIPPDKFIPLAEETGLVIDINKWVLKTASRQ 530 Query: 472 LRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHI 526 W L A+ ++ L + +++ L + K K++ +E+ E + Q Sbjct: 531 NDEWTRAGLNSIRVAMNLSGYKLATQNIIQDIKEAL-KTVKFDSKKLELEITENILMQDD 589 Query: 527 SRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLV 586 + + + + + +A++ G S S++ V +K+ + + +N++++ Sbjct: 590 DETMQIFQQIREMNISIALDDFGTGYSSLSYLTSFPVNTIKIDRSFIMGSALQVDNRVII 649 Query: 587 QSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRY 644 ++++ + A G+ ++ ++ L + G QG + + P D K + + Sbjct: 650 KAIIAMGHSLGKTIIAEGIETKEQFDLLKRYGCDEAQGYYLSPPIPADEFAKLLVKGF 707 >UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SHX8_LEPBA Length = 818 Score = 541 bits (1394), Expect = e-152, Method: Composition-based stats. Identities = 95/513 (18%), Positives = 208/513 (40%), Gaps = 29/513 (5%) Query: 158 LQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLRE---IQNAREQHS 214 L +L + R + L+ +N + E + + LLR+ I ++ Sbjct: 304 LAEKLDLPQEFYERRKKFLDIAAKNNEIVEFEELIQDQNDKVTYLLRKYIPIDDSETNQK 363 Query: 215 RL-------------DTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 R + I A D TGL NR F + L++ + T Sbjct: 364 RFISFGVDITERKLSEERITYLAYYDALTGLANRTLFIDHANQALKNHKSTETLLAFYFF 423 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAAL-LPHRTLKE 320 + +F ++D+ GH++ + + L M +AR+ +FA L + Sbjct: 424 DIDNFKFINDSLGHTKGDILLQMVGARLKRVMTEV--DTVARFGGDEFAILKVDVSNKSS 481 Query: 321 AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGG 379 A A +++ + + D I +GI G + +++++++ A A G Sbjct: 482 AAEFAQKILDILSQPFHIMGRDLFTTISMGIALSPNDGVTSAELLKNSDMAMYKAKELGR 541 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG 438 N++ Y + L + + + + + L+ +P ++ QV E + R Sbjct: 542 NNYKFYTNELILRSEKRLYIENSLRKAIQNEELLLFFQPKISTITNQVCGAEALIRWKHP 601 Query: 439 N-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRP 492 V E++P+ G+ E + L + W E+NL +I V+ + L R Sbjct: 602 ERGWVPPIEFIPVAEDSGIIERIGDWVLEEACRLKKQWSEKNLPSFPLSINVSGKQLARA 661 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 + ++ T++Q + I +EL E+ + ++ + ++ LG++V+++ G Sbjct: 662 NWSHRVQATILQY-GINPEEIELELTESSIMENPEKSIEAFEYLSELGIKVSIDDFGTGY 720 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S S++K++N +++K+ V ++E +++ + ++++ +V A GV + ++ Sbjct: 721 SSLSYLKKINADVIKIDRSFVVDLELNEDDRAICKAIINMAHSLGLEVIAEGVENPAQRD 780 Query: 613 TLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYS 645 L G QG ++ P D V + Q+++ Sbjct: 781 LLHDLGCHMIQGYLYSKPLPEDEFVV-FVQKFN 812 >UniRef50_C4ZM30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM30_THASP Length = 1002 Score = 541 bits (1394), Expect = e-152, Method: Composition-based stats. Identities = 109/481 (22%), Positives = 193/481 (40%), Gaps = 19/481 (3%) Query: 171 RATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKT 230 R I + G P + + + I+ + IR A D T Sbjct: 521 RGEFINTRKDGGTYTELATIAPIKQADGSVSHYVAIKEDITGRREAEARIRQLAYYDTLT 580 Query: 231 GLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLS 290 GL NR ++L + + G G++M++ + F +L+DT GH + + L Sbjct: 581 GLPNRSLMWDRLRHAIAASARSGASGMLMLLDIDHFKLLNDTQGHEVGDALLREVAQRLR 640 Query: 291 TFMMRYPGALLARYHRSDFAALLPHRTLKE------AESIAGQLIKAVDTLPNNKMLDR- 343 + +AR DFA ++ + AE IA L + V + Sbjct: 641 GALREE--DTVARVGDDDFAIVVENLGADRDEAIGRAEKIAEHLHRCVTAPCELGLASGP 698 Query: 344 -DDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRT 401 +G+ +R + V++ AE A A G N + +++ Sbjct: 699 YHVGASLGLTLFRGRNAAADAVLKQAEVAVARAKDDGRNLIRFFSEAMQAVVAARAELEL 758 Query: 402 LIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFD-GNEEVSSAEYMPMVLQFGLSEEY 460 + L+ G RLY +P + R G+V E + R FD E +S A ++P+ + GL Sbjct: 759 KLRAALACNGFRLYYQPQLDRNGRVIGAEALIRCFDAEGEMISPAAFIPLAEETGLIVPI 818 Query: 461 DRLQISRLIPLLRYWPE------ENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRII 514 + LR W +L+I V+ +P F + + + + + + Sbjct: 819 GEWVLETACAQLRAWQRTPSTAGLSLSINVSARQFHQPDFVGKVAAAIER-HRIRPGGLE 877 Query: 515 IELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVR 574 IEL E+ V I +R + ALGVR A++ G S S++K L + LK+ VR Sbjct: 878 IELTESVVIGDIETTVLRMRQIKALGVRFALDDFGTGYSSLSYLKRLPFDQLKIDQMFVR 937 Query: 575 NIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLD 634 ++EK T ++ +V++++ +V A GV + ++ + L+ RG QG F P++ Sbjct: 938 DMEKDTSSEAIVRAILALSRSLDLKVVAEGVETAAQHELLLTRGCELFQGYLFGRPVPIE 997 Query: 635 T 635 Sbjct: 998 D 998 >UniRef50_C4KD26 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Betaproteobacteria RepID=C4KD26_THASP Length = 703 Score = 540 bits (1393), Expect = e-152, Method: Composition-based stats. Identities = 94/463 (20%), Positives = 182/463 (39%), Gaps = 27/463 (5%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 LLR+I +E +T I A D TGL NR F +L + + V+ + Sbjct: 235 LLRDITERKE----YETRIHHLAYFDSLTGLANRRSFLERLEREIRRALQNKWRLAVLFL 290 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLA------------RYHRSDF 309 L F ++DT GH+ + L PG ++A R +F Sbjct: 291 DLDRFKSINDTLGHAAGDALLQQAAERLRAITR--PGDIVAHDTDRMGTAEFARLGGDEF 348 Query: 310 AALLPHRTL-KEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHA 367 LLP + +A +IA ++ ++ + + +GI + G+D +++HA Sbjct: 349 TVLLPTISRPDDALAIAERIRASICAPFAIEGQELCVTTSVGIAVFPDDGEDAATLIKHA 408 Query: 368 ESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQV 426 + A +A G N Y+ +L + V + + L+ L +P V R+G + Sbjct: 409 DIAMYDAKANGRNGCRYYNPALTAEAVHRVELEAGLRRALAHDELVLMYQPQVEVRDGSI 468 Query: 427 HHRELMCRIFDGNE-EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL----A 481 E + R + V E++P + GL + + R W L A Sbjct: 469 ATVEALVRWQTPDGRLVPPLEFIPFAEECGLIDAIGSWVLRRACHDAAQWQRRGLDLRVA 528 Query: 482 IQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGV 541 + ++ +R+ L + +R+ +E+ E+ + + + + LG+ Sbjct: 529 VNLSPVQFRASGLLDRIREALADSD-LPAERLELEITESALMADDADTHATLAALRTLGI 587 Query: 542 RVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVY 601 +A++ G S S +K L ++ LK+ V + +N +V+++V ++ Sbjct: 588 GIALDDFGTGYSSLSCLKRLPLDKLKIDRSFVSGLPDDVDNHAIVRAIVALARHLGFRIA 647 Query: 602 ATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRY 644 A GV + ++ + L + QG F+ + P S+R+ Sbjct: 648 AEGVETAAQAELLGELEADSLQGYLFSRAVPAAELEALASRRW 690 >UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U882_9DELT Length = 958 Score = 540 bits (1393), Expect = e-152, Method: Composition-based stats. Identities = 78/455 (17%), Positives = 181/455 (39%), Gaps = 16/455 (3%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 + +I + + + +L + D TGL NR+ ++L+ L + GT V+ Sbjct: 506 AVFHDISDMKHKEEQLAHHL----YHDGLTGLPNRVLVLDRLSMALSHANRTGTKVAVLF 561 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDF-AALLPHRTLK 319 + L +F ++D++GH+Q + + L +AR +F ++ + Sbjct: 562 LDLDNFKKINDSFGHAQGDTLLKAVAERLVALYR--DEDTVARQGGDEFLVVVVDVHEER 619 Query: 320 EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQG 378 E +A L + + K + IG+ + GQD ++++A+ A + +G Sbjct: 620 EVVDLAEGLQRVFEEPFVIKGQEVFITPSIGVTLYPDDGQDPASLVKNADMAMYQSKAKG 679 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFD 437 NS+ ++ + E+ + + + + L +Y +P V G+V E + R Sbjct: 680 RNSYFLFTQQMSERIAQRLTLESDMRRALKEREFTVYFQPKVDLASGEVSGLEALVRWVK 739 Query: 438 GNEEV-SSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIR 491 + + S +++PM + GL + ++ +A+ ++ + Sbjct: 740 PDGIIVSPEDFIPMAEETGLIVPLGEFVLDASCKAMQVLQGVGCSALTVAVNLSPIQFGQ 799 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 + L + R+ +E+ E+ + + + + LG+ ++++ G Sbjct: 800 EDLVEMVVANLER-NGLPASRLELEITESTLMTDVQSSVAQLNRLVELGITISIDDFGTG 858 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S ++K + LK+ +R+I + +V+++V V A GV ++ + Sbjct: 859 YSSLYYLKNFPISTLKIDRSFIRDITIDDSDAKIVETVVLMARTMGIGVVAEGVETKEQL 918 Query: 612 QTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV 646 L G QG +++ PL+ ++ + V Sbjct: 919 DLLATFGCATVQGYYYSRPLPLEKIIEFLLGKNGV 953 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 540 bits (1393), Expect = e-152, Method: Composition-based stats. Identities = 88/475 (18%), Positives = 183/475 (38%), Gaps = 12/475 (2%) Query: 178 GERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLF 237 + G P + + + T ++ + T + A D TGL NR Sbjct: 859 KKNGELFWEAASISPIKNAEGIITHFVAVKEDITERKAQQTTLTYQANYDALTGLPNRFL 918 Query: 238 FDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYP 297 ++L + ++ VM I L F ++DT GH + ++ L + + Sbjct: 919 AIDRLKQAILQADRQKKRVAVMFIDLDHFKDVNDTLGHEYGDLLLQKVSQRLKQCLRK-- 976 Query: 298 GALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS 356 +AR +F +LP+ R + IA +++ +++ N + IGI + Sbjct: 977 SDTVARLGGDEFLIILPNLRETHHCKLIASKILSSLEKPFNLLTEEAFISASIGITLYPD 1036 Query: 357 -GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLY 415 G D +M +A++A G N + Y + E+ + +R L+ L + L Sbjct: 1037 DGNDVSVLMRNADAAMYLGKRGGRNDFKFYTMGMNEEAQSRLRIEKLLRYALKKNEFYLV 1096 Query: 416 QKPAVTREGQ-VHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLR 473 +P + Q V E + R + VS +++ + + GL E IS+ + Sbjct: 1097 YQPIIDLRFQTVIGAEALLRWNNPELGRVSPDQFISIAEETGLISELGAWVISQACQEVV 1156 Query: 474 YWPEEN----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRL 529 W + +A+ ++ + + + + + +E+ E + + Sbjct: 1157 NWQTQGSPIWVAVNLSPRQFRESKLLEIISNAIT-LNGITNHYLELEITEKLLLEDFPGS 1215 Query: 530 QPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSL 589 + +I ++ + R++++ G + S++ + LK+ + +I E LV+++ Sbjct: 1216 KGIIEQLHEMDFRLSIDDFGTGYSALSYLIKFPFNRLKIDRSFIADIPHNQEVLALVKTI 1275 Query: 590 VEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRY 644 + G QV A GV + + L G QG FF+ L ++Y Q + Sbjct: 1276 IAMGHGLKLQVIAEGVETTEQANILEAEGCDYAQGYFFSRPL-LSEEFRRYLQSH 1329 >UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5VXY3_SPIMA Length = 1092 Score = 540 bits (1393), Expect = e-152, Method: Composition-based stats. Identities = 83/461 (18%), Positives = 187/461 (40%), Gaps = 13/461 (2%) Query: 192 PPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEK 251 P R T ++ Q + ++ A D T L NR ++L + + + Sbjct: 634 PMRDEEGYITHFIAVKEDITQQKHNEEILAHQANYDALTDLPNRTLIFDRLRQAITEAQV 693 Query: 252 VGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAA 311 ++ VM I L F ++DT GH + L + + + R +F Sbjct: 694 HHSNVAVMFIDLDHFKNINDTLGHELGDFLLKEAGMRLRGCIRKT--DTVGRLGGDEFLL 751 Query: 312 LLPHRT-LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAES 369 ++P L +AE IA Q++ + N + IGI ++ G++ ++ +A++ Sbjct: 752 IIPKLDDLVQAEYIANQVLDVLGEPFNLCGEEAFISASIGIASYPQDGKNVSTLVRNADT 811 Query: 370 ATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKP-AVTREGQVHH 428 A A +G N +A + ++ ++ + + + +SR + +P Q+ Sbjct: 812 AMYAAKQEGRNVFAFFTQNMNDEAQSRIIIENQLRHAISRNELSVVYQPFIHLNTSQIVG 871 Query: 429 RELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAI 482 E + R ++ + +++ + + L + +S+ + W ++ +A+ Sbjct: 872 AEALMRWYNPELGNIRPDQFIAIAEESRLIVDLGEWILSQACQEVANWHQQGNNGLWVAV 931 Query: 483 QVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVR 542 ++ L P + + + + +E+ E + + + +Q +I+ +N L +R Sbjct: 932 NMSPRQLRTPNLVNVIIEAIAN-NGLSSDCLELEITERSLVEEVPGVQSLIKQLNHLKIR 990 Query: 543 VAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYA 602 +A++ G S S++K +LK+ + ++ + LV++++ G V A Sbjct: 991 LAIDDFGTGYSSLSYLKRFPFSVLKIDKSFISDLPDDQDAIALVKTMITMAHGLGLVVVA 1050 Query: 603 TGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 G+ + ++ L +G GQG F+ P + Y QR Sbjct: 1051 EGIETTAQLDFLCNQGCDYGQGYLFSKPLP-PAQFRAYLQR 1090 >UniRef50_Q3IEZ9 Putative uncharacterized protein n=2 Tax=Pseudoalteromonas RepID=Q3IEZ9_PSEHT Length = 842 Score = 540 bits (1393), Expect = e-152, Method: Composition-based stats. Identities = 98/464 (21%), Positives = 190/464 (40%), Gaps = 16/464 (3%) Query: 177 NGERGSNVLGTIYEWPPRTSSALDT-LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNR 235 NG+ L I P S A+ + +I + + I A D TGL NR Sbjct: 363 NGDIYIEWLTIIEIKEPNNSDAIYAAIFSDIT----ERKNAEDKIVQLAYFDELTGLPNR 418 Query: 236 LFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMR 295 F+++L L + VM I L F ++D+ GHS + + + + Sbjct: 419 RLFNDRLKMALAAAHRDQHLLAVMFIDLDRFKEVNDSLGHSAGDCLLTLVAARIEATLNE 478 Query: 296 YPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR 355 G LAR +F L + S+A +++ +++ ++ IG + Sbjct: 479 --GDTLARLGGDEFVVLCEINKIDAVASLADKILNNLNSPFQLDHVEVGVTASIGAAVYP 536 Query: 356 S-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRL 414 G D+E +++HA+ A + G NS+ ++ S+ + + + + L L Sbjct: 537 DDGLDSETLLKHADIAMYRSKDVGRNSFQLFKPSMNARSLERLAMMSRFQHALDNNEFEL 596 Query: 415 YQKP-AVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLL 472 Y +P + Q+ E + R D + +S A+++P+ + GL D I++ +L Sbjct: 597 YFQPKQCLKSEQIMGVEALLRWHDPDLGMISPAQFIPLAEELGLIVRLDLWVINQAGKVL 656 Query: 473 RYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHIS 527 W +E L AI ++ L + + + T+++ + IEL E+ + Sbjct: 657 TLWQKEGLVAGRLAINISACHLSQGKLANNI-GTMLKHYNLPGSLLEIELTESSFISSFT 715 Query: 528 RLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQ 587 + + ++ + LGV +A++ G + S++ +L + LK+ + I N +V Sbjct: 716 QAKTQLQQLKKLGVHIALDDFGTGYSALSYLTKLPFDTLKIDASFIAKIPDEYGNSQIVA 775 Query: 588 SLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQ 631 +L+ S + V A GV ++ LI G QG ++ Sbjct: 776 ALIALASNLNLMVVAEGVEQPAQKNYLISLGCNVIQGYYYCRPL 819 >UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60BD0_METCA Length = 1214 Score = 540 bits (1392), Expect = e-152, Method: Composition-based stats. Identities = 95/451 (21%), Positives = 187/451 (41%), Gaps = 16/451 (3%) Query: 206 IQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPD 265 I + + R + IR A D TGL NR +L ++ + GT+G ++ + L Sbjct: 763 ISSDISELKRTEEKIRQLAYYDSLTGLPNRSLIFERLTQQMKAARREGTYGALLFMDLDY 822 Query: 266 FNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL----PHRTLKEA 321 F L+D+ GH + + L + AR +F LL P ++ Sbjct: 823 FKTLNDSLGHHMGDRLLVQVAERLKNCL--EDEEAAARLGGDEFVVLLAPAKPSASVAAG 880 Query: 322 ESI--AGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSG-QDTEQVMEHAESATRNAGLQG 378 ++I A ++ + + + IGI + G E V++ A++A A +G Sbjct: 881 QAIVHARRVRELLSAPFQLDDYVHYISVSIGIALFPDGANTAEDVLKQADTAMYVAKNEG 940 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG 438 + Y+ ++ RG + + + L+ +Y +P + +G+V E + R F Sbjct: 941 RDGVRFYESAMEAVVRGRLELEKALRKALANDEFEVYYQPQMLGDGRVVGAEALIRWFHP 1000 Query: 439 NEE-VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLA-----IQVTVESLIRP 492 +S +++P+ Q G+ + + R L LA + V+ +R Sbjct: 1001 ERGAISPDQFIPVCEQNGMILRVGAIVLRRACACLAEIRARGLALPKLSVNVSPRQFMRS 1060 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 L ++ + +EL E + H I + LGV +++ G Sbjct: 1061 DLMTQLEQFCLE-NGVSPTDLCLELTEGVLLNHTELAVAQIGRLKNLGVSFSIDDFGTGY 1119 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S +++K L ++ LK+ VR++E+ + + +V+++V V A GV +R++ + Sbjct: 1120 SSLAYLKHLPLDDLKIASAFVRDLEQDSSDAAIVETIVSMARHLGLDVIAEGVETRTQVE 1179 Query: 613 TLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 L + G QG++FA P D ++ ++R Sbjct: 1180 ILERYGCHRFQGNYFARPLPKDDFIRFVAER 1210 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 540 bits (1392), Expect = e-152, Method: Composition-based stats. Identities = 84/440 (19%), Positives = 172/440 (39%), Gaps = 12/440 (2%) Query: 213 HSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDT 272 + + ++ A D T L NR + L ++ G VM + L F +++D+ Sbjct: 636 RKQAEERLQFLANHDPLTRLPNRSWLIACLEDRIQQIASSGQQVAVMFLDLDRFKLINDS 695 Query: 273 WGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKA 331 +GH +E + L + +AR +F L+ H + ++A ++ Sbjct: 696 FGHQTGDELLRETASRLEQVVGGRGQ--IARLGGDEFTLLVSHFASQATLSTLAEDILAV 753 Query: 332 VDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLP 390 + + + +GI + G D ++++A+ A A G N++ + + Sbjct: 754 LAQPLWLEGQELIVTGSLGISVYPHDGSDARTLLKNADVAMYRAKEAGKNTYQFFAAEMN 813 Query: 391 EKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREG-QVHHRELMCRIFDGN-EEVSSAEYM 448 + ++ + Q L RG L+ +P V ++ E++ R VS ++ Sbjct: 814 AQAIERLQLERGLRQALERGEFELHFQPIVAAATYRLEALEVLLRWRHPELGLVSPVRFI 873 Query: 449 PMVLQFGLSEEYDRLQISRLIPLLRYW-----PEENLAIQVTVESLIRPRFQRWLRDTLM 503 P+ + GL I + L W LAI ++ + + L Sbjct: 874 PLAEETGLIRPIGDWVIRQACRQLAEWDCLGLHVPRLAINLSARQFEQQGLIMQVAGALA 933 Query: 504 QCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNV 563 + R+ +E+ E+ V Q+ S ++ + ALGVR++++ G S S++K + Sbjct: 934 EA-GIAAGRLELEMTESMVMQNPSEAVSLLGELKALGVRLSIDDFGTGYSSLSYLKRFPL 992 Query: 564 ELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQ 623 + LK+ + + +N + ++++ S V A GV + ++ L +G Q Sbjct: 993 DTLKIDRSFIEGLPGDGDNAAIAEAILAMARKLSFSVVAEGVETEAQAAFLCAKGCQLLQ 1052 Query: 624 GDFFASSQPLDTNVKKYSQR 643 G F+ P QR Sbjct: 1053 GYLFSRPLPAAELPAFLQQR 1072 >UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K569_AZOSB Length = 947 Score = 540 bits (1392), Expect = e-152, Method: Composition-based stats. Identities = 82/439 (18%), Positives = 180/439 (41%), Gaps = 12/439 (2%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 H + + L+R A D T L NR ++ ++ + ++ I L F ++D Sbjct: 498 AHKQTEALLRHMAEYDALTDLPNRSLLHDRARAAIQGAARTDRLAALLFIDLDRFKNVND 557 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE-AESIAGQLIK 330 + GHS + L++ + + G +AR +F LL T + A + A Q+I Sbjct: 558 SLGHSVGDALLRQAAKRLASLL--HGGDTIARPGGDEFVMLLAEITDRAVAANRAAQIID 615 Query: 331 AVDTLPNNKMLDRDDMIHIGICA-WRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSL 389 A T + + IGI G D + ++ +A++A +A G N++ + D + Sbjct: 616 AFSTPFRVEHYELSVTPSIGIAIAPDDGVDADTLLRNADAAMYHAKESGRNTYRFFTDEM 675 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEY 447 + R + L+ Q +SR ++ +P + ++ E + R ++ + Sbjct: 676 SLRVRERLELENLLRQAMSRDEFEVFYQPQFGLSDHRILGCEALVRWRHPERGLIAPERF 735 Query: 448 MPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTL 502 +P+ GL R + + W L A+ + + F + + L Sbjct: 736 IPLAEDTGLIVAIGRRVLETACHTAQGWRAAGLGDIPVAVNASPVQIHHGNFAETVAEVL 795 Query: 503 MQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELN 562 + + + IEL E+ + + + + + +GVR+A++ G S +++K Sbjct: 796 AET-GLPARLLEIELTESTLMADAAPVAATLAALQDMGVRLAIDDFGTGYSSLAYLKRFQ 854 Query: 563 VELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGG 622 ++ LK+ + ++ ++ + +++ V A GV + ++ + L+ +G G Sbjct: 855 LDKLKIDRSFINDLPGDPDDANITVAIIGIARSLGMSVIAEGVETAAQERFLVDQGCAEG 914 Query: 623 QGDFFASSQPLDTNVKKYS 641 QG F+ P+++ + Sbjct: 915 QGYLFSPPVPVESMTALLA 933 >UniRef50_B9MED7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MED7_DIAST Length = 894 Score = 540 bits (1391), Expect = e-152, Method: Composition-based stats. Identities = 97/460 (21%), Positives = 181/460 (39%), Gaps = 21/460 (4%) Query: 195 TSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGT 254 + + ++ + R + ++ A D TGL NR +QL + GT Sbjct: 430 ADGGVVIIYHDVTDLRLATAEVE----HLAFYDQLTGLPNRRLLLDQLGDASASAVRTGT 485 Query: 255 HGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLP 314 HG V+ I L F L+DT GH + + L + + G ++AR +F LL Sbjct: 486 HGAVLFIDLDHFKTLNDTLGHEIGDYLLQQVARRLESGVR--VGDIVARLGGDEFVVLLA 543 Query: 315 ------HRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSG-QDTEQVMEHA 367 R ++ ++A ++++ + +G + S Q +V++ A Sbjct: 544 GLATEAERAREQVRAVAEKVVQLLAQPYPIAGQSYHGSCSVGAALFGSVLQTAAEVLKQA 603 Query: 368 ESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVH 427 + A Q GN+ +D + R + ++ L G L+ +P TR+G V Sbjct: 604 DIAMYQVKAQRGNAVCFFDPRMQVALSARARLESDLQDALREGQFLLHLQPQFTRDGAVV 663 Query: 428 HRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP------EENL 480 E + R V AE++ + L R ++ LL W E +L Sbjct: 664 GVEALLRWQHPERGLVLPAEFIGVAEDSELIVPLGRWVLASACELLARWQASPRLRELSL 723 Query: 481 AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALG 540 ++ V+ P F L L++ + R+ +EL E+ V + + + + G Sbjct: 724 SVNVSARQFRSPDFVEQLSQLLLR-SGAPAHRLELELTESLVLEDVEDSIAKMHQLRTKG 782 Query: 541 VRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQV 600 VR AV+ G S +++ L + LK+ V ++ + + ++VQ+++ +V Sbjct: 783 VRFAVDDFGTGYSSLAYLTRLPLHRLKIDRTFVHHLGESRSDDVVVQTILGMARNLDLEV 842 Query: 601 YATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 A GV + + L G QG A P++ +Y Sbjct: 843 VAEGVETEEQRSFLALHGCDVYQGYLLAHPMPVEALQARY 882 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 540 bits (1391), Expect = e-152, Method: Composition-based stats. Identities = 93/455 (20%), Positives = 189/455 (41%), Gaps = 17/455 (3%) Query: 202 LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 + +I + +E +RL+ A D T L NRL F+N+L L E+ G V+++ Sbjct: 698 VFTDITHLKESEARLE----FLAHHDPLTHLPNRLLFNNRLDQALHQAEREGRRLAVLLL 753 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKE 320 L F ++D++GH +E + L+ + + LAR +FA L+ R + Sbjct: 754 DLDRFKDINDSYGHLAGDELLKYVAQRLTQRLRQ--SDTLARLGGDEFALLMHDLRHDDD 811 Query: 321 AESIAGQLIKAVDTL-PNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQG 378 A +A +L+ + +++ ++ + IGIC + G+ + +++ A++A A G Sbjct: 812 AARLASELLSGLSEPWRSSEGVEVSVGVSIGICIYPDHGRTPQTLLQGADAALYRAKGDG 871 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFD 437 + Y D + R + + + L+ G L+ +P V R G++ E + R D Sbjct: 872 RGVYRYYADEMTRIARERLHIEARLRRALADGQLLLHYQPQVDLRSGRIIGAEALVRWQD 931 Query: 438 G-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIR 491 + ++P+ GL E + R W + L A+ V+ + Sbjct: 932 PEQGLIPPVRFIPVAEATGLIGEIGAWVLGEACRQARAWLDAGLPALTVAVNVSPRQFHQ 991 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 + L++ + +EL E + + + V++ + LGV VA++ G Sbjct: 992 ADLATQVMQVLVET-GLPPTHLELELTEGALMEREAEALQVLQRLRGLGVGVAIDDFGTG 1050 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S + +K +++LK+ + +I ++ + +++ V A GV + + Sbjct: 1051 YSSLASLKRFPIDVLKIDRSFITDIPDDPDDMEIAAAIIAMGHSLGILVLAEGVETAEQL 1110 Query: 612 QTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV 646 L QR QG + P + ++ S+ Sbjct: 1111 AFLQQRNCDRYQGFLRSRPLPAQAFEQLLREQASL 1145 >UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax=cellular organisms RepID=Q607T2_METCA Length = 1346 Score = 540 bits (1391), Expect = e-152, Method: Composition-based stats. Identities = 92/481 (19%), Positives = 188/481 (39%), Gaps = 18/481 (3%) Query: 172 ATRILNGERGSNVLGTIYEWPPRTSSALD--TLLREIQNAREQHSRLDTLIRSYAAQDVK 229 R NGE + VL TI T + ++ + +I + +E + I A D Sbjct: 861 WNRRKNGELFA-VLETIVTVRDETGAMVNYIGVAADISSLKE----AEEHIHHLAYYDPL 915 Query: 230 TGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLL 289 + L NR + + L E+ V+ + + F ++D+ GH +E + + Sbjct: 916 SALPNRRYLMERAEYALALAERRKEELAVVFLDVDHFKDVNDSLGHQVGDELLVRVATQI 975 Query: 290 STFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHI 349 F +AR +FA LLP +A +++ A+ + I Sbjct: 976 KEFTRET--DTVARLGGDEFALLLPDLGRDAVSQVADKILAALRKPFEHSGQTFAVTGSI 1033 Query: 350 GICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLS 408 GI + G D E ++ +A++A +A QG N + YD + + + + + + Sbjct: 1034 GISLYPHDGTDFETLLRNADTAMYHAKQQGRNQFRFYDPGMNVDILARLTVLSELREAIP 1093 Query: 409 RGGPRLYQKPAVT-REGQVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQIS 466 G R + +P + G + E + R +S +++P+ L + Sbjct: 1094 AGELRTFFQPEIDLANGTLVGAEALVRWQHPTRGLLSPDQFIPVAESNDLIIAISDWVLE 1153 Query: 467 RLIPLLRYWPEE-----NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEAD 521 L W + + + + PR ++ L + + +EL E+ Sbjct: 1154 DTCRHLAQWKKADQAPITVGVNLAARHFRDPRLVPRVKSLLCRY-GVPGSSLQLELTEST 1212 Query: 522 VGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTE 581 + ++ V++ + ALG ++++ G S S++K L + LK+ VR+I + Sbjct: 1213 LLDADAQTMIVLQELIALGCSLSIDDFGTGYSSLSYLKNLPIATLKIDQSFVRDIAFDAD 1272 Query: 582 NQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 ++ + ++V +V A GV + + + L+++G GQG F+ +K Sbjct: 1273 DRTISGTVVALGHSLGLKVIAEGVETEEQRRILLEQGCDFGQGYLFSRPLSSKEFIKWRM 1332 Query: 642 Q 642 + Sbjct: 1333 E 1333 >UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E9L8_GEOLS Length = 631 Score = 540 bits (1391), Expect = e-152, Method: Composition-based stats. Identities = 101/496 (20%), Positives = 198/496 (39%), Gaps = 22/496 (4%) Query: 157 WLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRL 216 L++ L Q +E L+ R +++GT + S + L +I R Sbjct: 132 ILEQILTTQRRVEQN--DFLHDGRHYHLVGTPLKNHDGAISRVVLLYTDITERRAAA--- 186 Query: 217 DTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHS 276 I A D TGL NR+ ++LA LL + ++ I L F ++DT GH Sbjct: 187 -EEIERLAFFDSLTGLPNRVLLKDRLAQLLTRAGRYNEMVAILFIDLDRFKEVNDTLGHG 245 Query: 277 QVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAE-SIAGQLIKAVDTL 335 ++ ++ L+ + +AR +F LLP T ++ IA +L++++ Sbjct: 246 TGDQLLQVVSERLTACLR--SCDTVARLGGDEFVVLLPGITERDCVGDIAAKLLQSLCKP 303 Query: 336 PNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGR 394 + IGI W G + ++A++A +A QG N++ Y + Sbjct: 304 VQLDAREVFTSGSIGISLWPIDGDSVSTLFKNADTAMYHAKEQGRNTYRFYTPQMHATSM 363 Query: 395 GNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVL 452 + + L RG L +P V+ G + E + R + ++P+ Sbjct: 364 EQLTLSNDLRYALERGELHLCYQPQVSFETGGLIGVEALLRWIHPKLGMIPPDRFIPLAE 423 Query: 453 QFGLSEEYDRLQISRLIPLLRYW-----PEENLAIQVTVESLIRPRFQRWLRDTLMQCEK 507 GL + W P +A+ ++ + F ++ L Q Sbjct: 424 DTGLIVPIGTWVLHEACRQAMMWVAQGLPSLRVAVNISAKQFRESDFSDTVKAVL-QTTG 482 Query: 508 SQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLK 567 + +EL E + +++++ + ++ + +GV +A++ G S S++K ++ LK Sbjct: 483 LAPNLLELELTEGMLIENVTQTKLTLQSLKDMGVTLAIDDFGTGYSSLSYLKHFPLDRLK 542 Query: 568 LHPGLVRNIEKRTEN-QLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDF 626 + V+ I +++ + +V+++V V A GV + + L R QG F Sbjct: 543 IDKSFVKEIAEKSGDAAAIVEAVVALGHSLKLTVIAEGVEQQDQVDFLHNRKCDELQGYF 602 Query: 627 FAS---SQPLDTNVKK 639 F+ Q L+ ++K Sbjct: 603 FSRPLTPQALEELLRK 618 >UniRef50_B8HRI7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HRI7_CYAP4 Length = 744 Score = 540 bits (1391), Expect = e-151, Method: Composition-based stats. Identities = 97/505 (19%), Positives = 203/505 (40%), Gaps = 28/505 (5%) Query: 160 RQLAGQELLETRATRILNGERGSNVLGTIYEWP----PRTSSALDTLLREIQNAREQHSR 215 +QL + L ++L E N+ W + R+I +++ Sbjct: 216 KQLIQKYTLVVETGQVLEEELPVNITPLPITWLHHQIVPLGDGIAITARDISERKQK--- 272 Query: 216 LDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQ-EKVGTHGIVMMIRLPDFNMLSDTWG 274 + + A D T L NR +F N+L +LE + H V + L F +++D+ G Sbjct: 273 -EAELHRQAFYDPLTELPNRTYFMNRLTKVLERAGRRQDFHYAVFFLDLDRFKVVNDSLG 331 Query: 275 HSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE-AESIAGQLIKAVD 333 H +E + LS+ + ++AR +FA LL + + IA +L + + Sbjct: 332 HLLGDEFLKAIARRLSSCLREE--DMVARLGGDEFAILLEELSNPDIVHRIAERLQRVLS 389 Query: 334 TLPNNKMLDRDDMIHIGICAWRSG-QDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK 392 K + IGI S + E ++ A+ A A QG I+D ++ + Sbjct: 390 APFTLKQHELFTTASIGIALGTSYYEQPEAILRDADIAMYQAKTQGKARHIIFDQAMHTR 449 Query: 393 GRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPM 450 + + + + R L +P V+ + ++ E + R +S AE++ + Sbjct: 450 AVKRWQLESDLRWAIERREFCLVYQPIVSIQTERLIGFEALVRWHHPQRGWISPAEFISV 509 Query: 451 VLQFGLSEEYDRLQISRLIPLLRYWPEE-----------NLAIQVTVESLIRPRFQRWLR 499 + GL + LR W + +++ ++ + +P +++ Sbjct: 510 AEETGLIIPLGHWVLWEGCRQLRQWQSQFNLSPTAEPPLTVSVNLSSKQFCQPDLIHYIQ 569 Query: 500 DTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIK 559 L Q + + +EL E+ + +++S ++ + LG+++A++ G S S++ Sbjct: 570 QVLQQT-GMEGTCLKLELTESILMENLSTATSLLVQLKELGIQLALDDFGTGYSSLSYLH 628 Query: 560 ELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGV 619 +++LK+ + IE TEN +V++++ + QV A GV ++++ L Sbjct: 629 RFPLDVLKIDRSFINGIEAETENLEIVRTILSLARSLNLQVVAEGVETQAQLDHLQALQC 688 Query: 620 TGGQGDFFASSQPLDTNVKKYSQRY 644 QG + +++ Q Y Sbjct: 689 GYAQGYLISRPL-TPEKTEQFLQEY 712 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 776 0.0 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 767 0.0 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 761 0.0 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 748 0.0 UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA a... 747 0.0 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 745 0.0 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 744 0.0 UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=ce... 744 0.0 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 744 0.0 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 743 0.0 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 734 0.0 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 731 0.0 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 731 0.0 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 731 0.0 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 729 0.0 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 729 0.0 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 729 0.0 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 728 0.0 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 727 0.0 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 727 0.0 UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/P... 726 0.0 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 724 0.0 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 724 0.0 UniRef50_A8FYM5 Signal transduction protein containing a membran... 723 0.0 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 723 0.0 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 722 0.0 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 722 0.0 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 722 0.0 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 722 0.0 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 722 0.0 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 722 0.0 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 722 0.0 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 721 0.0 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 721 0.0 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 720 0.0 UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/P... 720 0.0 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 719 0.0 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 719 0.0 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 718 0.0 UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 718 0.0 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 717 0.0 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 717 0.0 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 717 0.0 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 716 0.0 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 716 0.0 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 716 0.0 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 715 0.0 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 714 0.0 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 714 0.0 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 714 0.0 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 713 0.0 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 713 0.0 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 713 0.0 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 713 0.0 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 712 0.0 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 712 0.0 UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/P... 712 0.0 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 712 0.0 UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curviba... 712 0.0 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 712 0.0 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 712 0.0 UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 712 0.0 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 712 0.0 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 711 0.0 UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/P... 710 0.0 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 709 0.0 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 709 0.0 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 709 0.0 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 708 0.0 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 708 0.0 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 708 0.0 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 708 0.0 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 708 0.0 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 707 0.0 UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/P... 707 0.0 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 707 0.0 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 706 0.0 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 706 0.0 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 706 0.0 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 706 0.0 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 706 0.0 UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/P... 706 0.0 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 705 0.0 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 705 0.0 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 705 0.0 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 705 0.0 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 705 0.0 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 704 0.0 UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 704 0.0 UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/P... 704 0.0 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 704 0.0 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 704 0.0 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 703 0.0 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 703 0.0 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 702 0.0 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 702 0.0 UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 701 0.0 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 701 0.0 UniRef50_B9M6C9 Response regulator receiver modulated diguanylat... 701 0.0 UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 701 0.0 UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter... 700 0.0 UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 700 0.0 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 700 0.0 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 700 0.0 UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/P... 700 0.0 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 700 0.0 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 700 0.0 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 699 0.0 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 699 0.0 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 699 0.0 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 699 0.0 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 699 0.0 UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfuro... 699 0.0 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 699 0.0 UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 699 0.0 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 698 0.0 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 698 0.0 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 698 0.0 UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 697 0.0 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 697 0.0 UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 696 0.0 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 696 0.0 UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylat... 696 0.0 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 696 0.0 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 695 0.0 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 695 0.0 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 695 0.0 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 695 0.0 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 695 0.0 UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/P... 695 0.0 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 694 0.0 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 694 0.0 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 694 0.0 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 694 0.0 UniRef50_A1ALB3 Response regulator receiver modulated diguanylat... 694 0.0 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 693 0.0 UniRef50_B8GQW3 Signal transduction protein containing a membran... 692 0.0 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 692 0.0 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 692 0.0 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 692 0.0 UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 692 0.0 UniRef50_A1SZV0 Response regulator receiver modulated diguanylat... 691 0.0 UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 691 0.0 UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 691 0.0 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 690 0.0 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 690 0.0 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 690 0.0 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 690 0.0 UniRef50_A0L8P4 Response regulator receiver modulated diguanylat... 690 0.0 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 690 0.0 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 690 0.0 UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Ba... 690 0.0 UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/P... 689 0.0 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 689 0.0 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 689 0.0 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 689 0.0 UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 689 0.0 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 689 0.0 UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/P... 689 0.0 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 688 0.0 UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/P... 688 0.0 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 688 0.0 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 688 0.0 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 688 0.0 UniRef50_C5V069 Diguanylate cyclase/phosphodiesterase with PAS/P... 688 0.0 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 687 0.0 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 687 0.0 UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 686 0.0 UniRef50_C6WW34 Response regulator receiver modulated diguanylat... 686 0.0 UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/P... 686 0.0 UniRef50_Q220B0 Response regulator receiver modulated diguanylat... 685 0.0 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 685 0.0 UniRef50_Q2SF23 Predicted signal transduction protein containing... 685 0.0 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 684 0.0 UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacter... 684 0.0 UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 684 0.0 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 684 0.0 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 684 0.0 UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 683 0.0 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 683 0.0 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 683 0.0 UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellula... 682 0.0 UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 682 0.0 UniRef50_A1AMG1 Response regulator receiver modulated diguanylat... 682 0.0 UniRef50_C4LDT9 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/P... 682 0.0 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 681 0.0 UniRef50_Q1N453 Predicted signal transduction protein containing... 681 0.0 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 680 0.0 UniRef50_C7RVM5 Response regulator receiver modulated diguanylat... 680 0.0 UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=unc... 679 0.0 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 679 0.0 UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 678 0.0 UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 678 0.0 UniRef50_Q3SIU2 Putative diguanylate cyclase/phosphodiesterase (... 678 0.0 UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_A1T0Y1 Response regulator receiver modulated diguanylat... 677 0.0 UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC 677 0.0 UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/P... 677 0.0 UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/P... 676 0.0 UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 676 0.0 UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 676 0.0 UniRef50_C1DB08 Predicted signal transduction protein containing... 676 0.0 UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/P... 676 0.0 UniRef50_Q488U0 Sensory box/GGDEF/EAL domain protein n=1 Tax=Col... 676 0.0 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 675 0.0 UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/P... 675 0.0 UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/P... 675 0.0 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 675 0.0 UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 675 0.0 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 675 0.0 UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extra... 674 0.0 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 674 0.0 UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/P... 674 0.0 UniRef50_Q0AAU4 Response regulator receiver modulated diguanylat... 674 0.0 UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax... 674 0.0 UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/P... 674 0.0 UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuni... 674 0.0 UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/P... 674 0.0 UniRef50_Q21UE9 Diguanylate cyclase/phosphodiesterase with PAS/P... 674 0.0 UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibac... 674 0.0 UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/P... 674 0.0 UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 ... 673 0.0 UniRef50_A8ZUW0 Diguanylate cyclase/phosphodiesterase with PAS/P... 672 0.0 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 672 0.0 UniRef50_Q2W8B7 Predicted signal transduction protein n=1 Tax=Ma... 672 0.0 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 672 0.0 UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n... 671 0.0 UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/P... 671 0.0 UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 671 0.0 UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pe... 670 0.0 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 670 0.0 UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Cauloba... 670 0.0 UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsul... 670 0.0 UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling p... 669 0.0 UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 669 0.0 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 668 0.0 UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magneto... 668 0.0 Sequences not found previously or not previously below threshold: UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation ki... 672 0.0 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 776 bits (2004), Expect = 0.0, Method: Composition-based stats. Identities = 96/657 (14%), Positives = 235/657 (35%), Gaps = 43/657 (6%) Query: 4 TTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVS-NDFSVL- 61 T + + G ++ + + + R+ + + I H+ + D S L Sbjct: 273 TNRIYFITVMAVGTSVTLLFV-----------WFLMQRLTSPLSLITRHVEAIPDKSGLH 321 Query: 62 -------RPQITELMMSADIVRVDL-LHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIK 113 + ++ L+ + + + + L H + + + + + L + Sbjct: 322 NLINLERKDELGTLINAFNSMILSLDQHQNALRESESNFRALADNANDGLQI---ITDSS 378 Query: 114 HPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRAT 173 H + + + L+TT + +++ + + ++ E Sbjct: 379 HLAYVNKRAAEIVGYSVEEMLLTTIETIIHPDHLQMIIERKAKTDAGEFVPKQ-FEIMLA 437 Query: 174 RILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLN 233 V W + ++R+I + + + I+ A D TGL Sbjct: 438 HRNGSCVPVEVTTARTIWQGKQVE--LAIVRDITD----RKKAEDEIQQLAYYDTLTGLP 491 Query: 234 NRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFM 293 NR ++L + + +M + L F ++DT GH + T+ L+ + Sbjct: 492 NRSLLQDRLGQGIVQAVRDNRKVAIMFLDLDRFKSINDTLGHVAGDSLLATVAERLTECV 551 Query: 294 MRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGIC 352 +AR +F ++ ++ IA +++ A+ + IGI Sbjct: 552 RET--DTVARIGGDEFVIIISAIEHAEDLNKIAEKILAAISKPLVLNDQEIFITASIGIA 609 Query: 353 AWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGG 411 + G D + ++++A+ A A QG N++ + + + ++ + + L R Sbjct: 610 IYPEDGTDVQGLLKNADLAMYKAKDQGKNAFQYFSREMNVQALEHLILENSLRRALERNE 669 Query: 412 PRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLI 469 ++ +P + G++ E + R + + + ++PM + GL + Sbjct: 670 FVIFYQPQMDLKSGRLVGMEALIRWQHPDLGLLPPSRFIPMAEETGLILPIGEWALQTAC 729 Query: 470 PLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQ 524 R W + +A+ + + +F + L + ++ +EL E+ + Sbjct: 730 AKNRAWMDAGFMPLRVAVNLCGIQFRQKKFIELIEAVLKKT-GLAPSQLELELTESMLMS 788 Query: 525 HISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQL 584 V+ + +GV +A++ G S S++K + +K+ +R++ ++ Sbjct: 789 KAEESTTVLHKLKEMGVSLAIDDFGTGYSSLSYLKNFPINRVKIDRSFIRDVPNNPDDTA 848 Query: 585 LVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 +V +++ + +V A GV + S+ + L R QG +S P + Sbjct: 849 IVSAIIAMAHNLNLKVTAEGVENHSQLEFLSTRNCNEIQGYLLSSPLPEAEFTRFLR 905 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 767 bits (1982), Expect = 0.0, Method: Composition-based stats. Identities = 94/476 (19%), Positives = 200/476 (42%), Gaps = 14/476 (2%) Query: 177 NGERGSNVLGTIYEWPPRTSSALDT--LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNN 234 N SN L + + S ALD L + Q + R++ ++R A D T L N Sbjct: 467 NQNLESNNLSLLTGFAQLASIALDNANLYQAAQQELAERKRIEEILRYLAYHDSLTELPN 526 Query: 235 RLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMM 294 R F+++L+ L + VM + L F ++DT GH ++ + S + Sbjct: 527 RTLFNDRLSMALNQAHRNKNKLAVMFLDLDHFKKVNDTLGHDIGDQLLKGIAQRFSKLLR 586 Query: 295 RYPGALLARYHRSDFAALLPHRTLKE-AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICA 353 + G +AR +F LL + T E A +A ++I + + IGI Sbjct: 587 K--GDTIARIGGDEFTILLHNITRAENASIVADKIIDTLANPWIIGNHEFHITTSIGIAL 644 Query: 354 WRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGP 412 + G D E ++++A++A A G N++ Y ++ + + + L R Sbjct: 645 YPDDGTDAESLLKNADAAMYQAKEMGRNNYQFYTPTMNAQTLRRFELENNLRRALDRKEF 704 Query: 413 RLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIP 470 +Y +P V G++ E + R +S AE++PM + GL + R Sbjct: 705 VIYYQPQVEIHTGKIVGVEALIRWQHPQRGMISPAEFIPMAEETGLIIPIGEWILRRACA 764 Query: 471 LLRYWPEENLA-----IQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQH 525 + W + + + ++ ++P +++ + L + + +E+ E+ + Sbjct: 765 QNKAWQDRGFSPMRVTVNLSARQFLQPHLPQYISNVLEDT-GLGPQWLELEITESLAMKD 823 Query: 526 ISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLL 585 ++ + + + +G+ +A++ G S +++K L +++LK+ + ++ +++ + Sbjct: 824 VAFTEKTLIELRKMGITLAIDDFGTGYSSLNYLKRLPIDILKIDRSFIHDLNTESDDVAI 883 Query: 586 VQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 + +++ +V A GV ++ + L Q+ QG F P+ +KY Sbjct: 884 ISAIITLGHNLKMKVVAEGVETKEQLMFLRQQQCDLMQGYLFTKPLPVRELEQKYL 939 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 761 bits (1967), Expect = 0.0, Method: Composition-based stats. Identities = 94/496 (18%), Positives = 200/496 (40%), Gaps = 13/496 (2%) Query: 161 QLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLI 220 A +E E + GS ++ P R + T + N +H R + + Sbjct: 397 VQAFKEEREGCFVLRNYRKDGSPFWNELFIAPVRDRDGVVTNYIGVMNDITEHRRYEEQL 456 Query: 221 RSYAAQDVKTGLNNRLFFDNQLATLLE-DQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 A D TGL NR ++L L + + VM + L +F ++DT GH+ + Sbjct: 457 VYQATHDPLTGLPNRNLLQDRLGQALALEAFRRRNPICVMFLDLDNFKKVNDTLGHTVGD 516 Query: 280 EQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPNN 338 + N L + G +AR ++ +LP+ R + + ++A ++I Sbjct: 517 MLLKAVANRLKNCLR--GGDTVARLGGDEYIIVLPNVREVPDVITVAKKMINVFAAPLLL 574 Query: 339 KMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNV 397 + IGI + G+ + ++++A++A +A QG N++ Y + + + Sbjct: 575 MGNEIYVTASIGIALFPTDGETVDALLKNADAAMYHAKEQGKNNYQFYSAEMNIRVFERL 634 Query: 398 RWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFG 455 T + + + L+ +P V R G++ E + R VS A+++P+ + G Sbjct: 635 SLETSLHRAVKNQEFLLHYQPRVDLRNGRICGVEALVRWNHPEMGLVSPAKFIPLAEETG 694 Query: 456 LSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQR 510 L + + W + L A+ ++ + + + LM+ Sbjct: 695 LIVPMGEWVLRTACAQNKAWQDAGLPPLRMAVNLSARQFRQENLIAMVEEILMET-GLAP 753 Query: 511 KRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHP 570 + + +EL E+ V Q + ++R + G+ VA++ G S S++K + LK+ Sbjct: 754 QWLELELTESLVMQEAEKSAAILRELTDRGIEVAIDDFGTGYSSLSYLKRFPIANLKIDQ 813 Query: 571 GLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASS 630 +R++ + ++ LV++++ G + A GV + L + QG +F+ Sbjct: 814 AFIRDMTRDPDDATLVKTIITMAHGLGMKTIAEGVELAEQIDFLCRHQCEEMQGYYFSRP 873 Query: 631 QPLDTNVKKYSQRYSV 646 + + + ++ Sbjct: 874 ITAEELGRLLADGKTL 889 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 748 bits (1932), Expect = 0.0, Method: Composition-based stats. Identities = 97/594 (16%), Positives = 216/594 (36%), Gaps = 18/594 (3%) Query: 62 RPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLRL 121 + EL + + ++ L + S+ + ++ L HP + + Sbjct: 374 EERTAELAGANSALETEIAEHRDAEEALRQRQRAIDSSSNGIMITDALEL-DHPIIYVNP 432 Query: 122 VYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGERG 181 ++ G ++ P G L + ++ L EL E A + G Sbjct: 433 AFERITGYAASEVLGRNPRLLCSG---DREQLGLEVIRVALC--ELREGHAELRNYRKDG 487 Query: 182 SNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQ 241 S + P ++ T I N + R + + + D TGL NR ++ Sbjct: 488 SLFWNALSVSPVLNAAGEVTNYVGIVNDITERKRYEEQLEYQSNHDGLTGLPNRNLLGDR 547 Query: 242 LATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALL 301 + L E+ V I L F ++D+ GH ++ LS + + Sbjct: 548 IGQALTYAERYQRQTAVFFIDLDHFKFINDSLGHDMGDKLLQIAARRLSECVRSI--DTV 605 Query: 302 ARYHRSDFAALLPHRTL-KEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQD 359 AR+ +F +L + ++A +A ++ AV + GI + G D Sbjct: 606 ARHGGDEFVIVLSDLAVSEDAAKVARKIQDAVCRPYQIGEHELVVSCSTGISLYPKDGSD 665 Query: 360 TEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPA 419 + ++++A+ A A G N++ Y L + + + + L R ++ +P Sbjct: 666 AQVLLKNADVAMYRAKQCGRNNFQFYTGDLNDIVLARLTMEKYLRRALERDEFLVHYQPK 725 Query: 420 VTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPE 477 V G++ E + R +S A ++P+ + GL + + W + Sbjct: 726 VDLLSGRITGMEALVRWQSPELGFISPASFIPLAEETGLIVAIGEWVLRTACAQNKAWQD 785 Query: 478 ENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPV 532 + L A+ ++ + + + + I +E+ E+ + + + Sbjct: 786 DGLPPMVVAVNLSPRQFRQEDLADTVHRIAEET-GLAPRYIELEVVESLLMDDVDGAVAM 844 Query: 533 IRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEA 592 + + LGV++ ++ G S S++K +++K+ VR+I + + +V++++ Sbjct: 845 LDALKELGVQLTMDDFGTGYSSLSYLKRFPFDMMKIDQSFVRDITRDPGSAAIVRTVISL 904 Query: 593 CSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV 646 + +V A G+ + + L QG +F+ P + + + Sbjct: 905 AHTLNLRVVAEGIETEGQLGYLRGLACDEMQGFYFSRPVPAAEFEQMLRDQRHL 958 >UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB1_CYAP4 Length = 884 Score = 747 bits (1929), Expect = 0.0, Method: Composition-based stats. Identities = 113/628 (17%), Positives = 224/628 (35%), Gaps = 25/628 (3%) Query: 26 CSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFSVLRPQITELMMSADIVRVDLLHGDKQ 85 Y +QAV TA L ++DF P + +A V+ ++ Sbjct: 257 TQRLQAERELYLRDRLLQAVTTATHHLLTNSDFETAVPHALATLGAA--AEVERVYIYDN 314 Query: 86 VYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIG 145 Y L + +V H ++ S G Sbjct: 315 RYCLINREPAMQLRFVWQADSFTVHEDNHRQ-------SPAFSSFSLSHWYDHLAEGKTI 367 Query: 146 FIIVMLFLAVRWLQRQLAGQELLETRATRILN---GERGSNVLGTIYEWPPRTSSALDTL 202 + F AG + L + + G G + + W + L + Sbjct: 368 SGLTNSFSPQEQDILNRAGIKSLLIVPILVDDQLWGCIGFDACQSSRCWSKNEEAVLAMM 427 Query: 203 LREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIR 262 I A Q + +IR A D+ T L NR F ++L L + + G V+ + Sbjct: 428 AVSISGAI-QRQHKEQVIRYQAFHDLLTDLPNRALFIDRLNLALSNAHRSGEKLSVLFLD 486 Query: 263 LPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKEA 321 L F ++DT GHS ++ + + L+ + G +AR+ +F LLP + + Sbjct: 487 LDRFKTINDTLGHSVGDQLLKAVAHRLTHCLRE--GDTIARWGGDEFTILLPQIHQVNDV 544 Query: 322 ESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGN 380 A +++ A++ + + + IGI + G D E +++HA+ A A G N Sbjct: 545 AKTAQRMLSALEQPFHLENHELYITPSIGIAIYDLDGHDGETLIKHADMALYQAKQLGRN 604 Query: 381 SWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN 439 ++ + L + + L R LY +P V + G++ E + R Sbjct: 605 TYQFFCSGLSNGAPERLNLEKSLRHALERQEFLLYYQPQVNIKTGKITGMEALLRWKHPE 664 Query: 440 -EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPR 493 V +M + + GL + + W ++ L A+ ++ +P Sbjct: 665 MGLVIPQLFMSVAEESGLIVAIGEWVLRTACAQNKTWQDQGLPPICIAVNLSARQFRQPD 724 Query: 494 FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLV 553 + L + + + +E+ E Q I + V++ + +G++++++ G Sbjct: 725 LTGMIARILDET-GLPPQYLDLEITETTAIQDIEFTKRVLQELQDMGIQISMDDFGTGYS 783 Query: 554 STSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQT 613 S + +++ + LK+ VR++ + + +V +++ G + V A GV + + Sbjct: 784 SLAHLQQFPLNTLKIDRSFVRDVAANSRDAQIVTAVIGLARGLNLNVVAEGVENDEQLNC 843 Query: 614 LIQRGVTGGQGDFFASSQPLDTNVKKYS 641 L QG F D + Sbjct: 844 LESLHCEEAQGYIFNRPLEADAATEILQ 871 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 745 bits (1924), Expect = 0.0, Method: Composition-based stats. Identities = 91/456 (19%), Positives = 180/456 (39%), Gaps = 11/456 (2%) Query: 194 RTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVG 253 R L ++ + SR + IR A D TGL NR F+++L L ++ Sbjct: 166 RLMEDLRRHAAMLEEEVAERSRAEERIRQMAYYDSLTGLPNRRLFNDRLRQSLALAQRHK 225 Query: 254 THGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL 313 VM + L F +++DT GH+ + + L R G +AR +F L Sbjct: 226 RPLAVMFLDLDRFKLINDTLGHAVGDRLLMAVAKRLRNCCRRE-GDTVARQGGDEFIINL 284 Query: 314 PHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESAT 371 +K+A ++A ++I T + IGI + G+ + ++++A+ A Sbjct: 285 SAISDVKDAFTVAQKIIDVFRTPFVIDGYELFITTSIGISVYPHDGRSGDALVKNADVAM 344 Query: 372 RNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRE 430 A QG N+ ++ + + + + + L R L+ +P V E GQ+ E Sbjct: 345 YRAKEQGRNNCQLFAPEMNARAFERLSLENDMRRALERDEFVLHYQPKVNVEHGQIACME 404 Query: 431 LMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQV 484 + R + V + ++P+ + GL + R W + +A+ + Sbjct: 405 ALVRWQHPSMGLVPPSRFIPLAEETGLIVPLGEWVLRTACQQNRAWQDAGYPTMQVAVNL 464 Query: 485 TVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVA 544 + L + + L + ++IE+ E+ + R ++ +GVR++ Sbjct: 465 SPRQLRQGDLSETVARVLAET-GLAPGWLVIEVTESILMDDAEETIRTFRRLDRMGVRIS 523 Query: 545 VNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATG 604 ++ G S ++K+ V LK+ VR I +++ + +++ G + V A G Sbjct: 524 IDDFGTGYSSLHYLKKFPVHTLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLGVVAEG 583 Query: 605 VRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 V + + + L QG F+ P + Sbjct: 584 VETVEQMEVLRALNCRYMQGFLFSEPAPAEQFTPVL 619 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 744 bits (1923), Expect = 0.0, Method: Composition-based stats. Identities = 99/605 (16%), Positives = 216/605 (35%), Gaps = 26/605 (4%) Query: 64 QITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDL-----FRELSVPLIKHP--- 115 + ++ + +++ + Q+ T+ + RE ++ + Sbjct: 347 YVQLIVDRSRRIQLLVDDRTAQLRTVNDDLIADIAARKHAEHELQLRERAIEASANAIII 406 Query: 116 GMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELL-----ET 170 ++ Y N + +T A+G I L+ W Q + + E Sbjct: 407 ARAVAPDYPLEYVNPAFTRITGYSPEEALGRNIGFLW-GKDWEQPGIEELRSIALEKREG 465 Query: 171 RATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKT 230 A + G+ +Y P + + + R ++ + +D T Sbjct: 466 HAVLRNYRKDGALFWSDLYIAPVKDDTGEVSHFVVALYDITATKRYESELEFQTNRDALT 525 Query: 231 GLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLS 290 GL NR ++L+ + + + + L F ++DT GH + + L Sbjct: 526 GLANRSLLRDRLSQAISYAHRYNHPIWIAFVDLDRFKFVNDTLGHQAGDLLLKAIAERLQ 585 Query: 291 TFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHI 349 + ++R +F +LP R + I +++ + + + I Sbjct: 586 HAVR--DTDTVSRMGGDEFVLILPERVDAGLSTGIVQRIMDGIAQPLTIEGHEFFISSSI 643 Query: 350 GICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLS 408 G+ + G E++++HA+ A A G N++ Y S+ E+ +R + + Sbjct: 644 GVAVYPNDGVTPEELIKHADIAMYRAKETGRNNFQFYTSSMNERALERLRLEGDLRNAME 703 Query: 409 RGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQIS 466 RG L+ +P + R G++ E + R + ++ + + GL I Sbjct: 704 RGEFILHYQPQLDLRTGKIVGVEALIRWQHPELGMIPPMRFIGLAEETGLIVPIGAWVIR 763 Query: 467 RLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEAD 521 + W E L ++ ++ + + L + + + + IEL E+ Sbjct: 764 EACRQNKVWQEHGLGSLRMSVNLSARQFAQQDLLESIALALEETQ-LPPQCLEIELTESL 822 Query: 522 VGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTE 581 V + ++R + ALGV+++++ G S S++K +++LK+ V +I + Sbjct: 823 VMADVDHAIGILRELKALGVQLSIDDFGTGYSSLSYLKRFPIDVLKIDRSFVNDITTDPD 882 Query: 582 NQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 + +V S++ V A GV + + L Q QG FF+ D Sbjct: 883 DAAIVASIISLAHSLRLTVIAEGVETEEQLAYLQQHDCDQIQGYFFSRPITADAMEVMLK 942 Query: 642 QRYSV 646 + Sbjct: 943 DDKRL 947 >UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=cellular organisms RepID=B0CAC5_ACAM1 Length = 901 Score = 744 bits (1922), Expect = 0.0, Method: Composition-based stats. Identities = 116/630 (18%), Positives = 247/630 (39%), Gaps = 25/630 (3%) Query: 26 CSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFSVLRPQITELMMSADIVRVDLLHGDKQ 85 A K +Q+VA A L + + + + L +A + R+ + Sbjct: 259 TERKLAEAELRKRDRLLQSVAQATTHLLENVGYDAIDTALAILGEAAGVDRICICKN--- 315 Query: 86 VYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIG 145 +TL G + R + P + + + ++H+L + + Sbjct: 316 -HTLPDTGESGTSMRFEWVRSSIESVRHRPHRQEQSYHSPHLRRWYHALTDEVTIRSLVQ 374 Query: 146 FI--IVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLL 203 + I LA + L ++ R G + Y W + S L + Sbjct: 375 DLPEIEQQVLAQDSILSILVVPIIVNHRF----WGFIELHNCTREYHWSLQEESILFAMS 430 Query: 204 REIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRL 263 I A ++ + + +IR A D T L NR+ F+++L L ++ VM + L Sbjct: 431 ASISAALQRQDK-EEIIRHQAFHDALTDLPNRVLFNDRLNIALASAQRNNGSVAVMFMDL 489 Query: 264 PDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAE 322 F +++DT GHS +E + L + G +AR+ +F LLP ++ +A Sbjct: 490 DRFKLINDTLGHSIGDELLKEVALRLQDCLR--DGDTVARWGGDEFTVLLPKIESVNDAI 547 Query: 323 SIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNS 381 + A +++ A+ + + IGI + GQ+ E ++++A+ A + QG + Sbjct: 548 NTAYRILDALKAAFVIRRHELFVTTSIGIAIYPEDGQEAEILLQNADVALYRSKEQGRGT 607 Query: 382 WAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN- 439 +Y+ ++ K + L R L+ +P V G++ E + R Sbjct: 608 CQLYNPTMNAK--EQFILENSLRHALDRDEFILHYQPKVNICTGEIVGLEALVRWEHPEM 665 Query: 440 EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLA-----IQVTVESLIRPRF 494 VS A ++P+ + GL E + W + LA I ++ +P Sbjct: 666 GLVSPATFIPIAEETGLIVELGEWVLRTACQQAVLWHKLGLAPLSVAINLSARQFYQPNL 725 Query: 495 QRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVS 554 + + + +++ +E+ E +++ + ++ + ALGV +A++ G S Sbjct: 726 VEIVAQVI-ESTGLNPQQLELEITETIAVKNMEFAKSILCNLQALGVHIAMDDFGTGYSS 784 Query: 555 TSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTL 614 +++K+L LK+ +++++ +++ ++ +++ G +V A GV + + + L Sbjct: 785 LNYLKQLPFNTLKIDQSFIQDLKPASKDVEIINAVIALGKGLDLKVVAEGVDNEEQLELL 844 Query: 615 IQRGVTGGQGDFFASSQPLDTNVKKYSQRY 644 QG F+ +D+ + Sbjct: 845 RSLNCEIVQGYLFSRPLSVDSTTDILQANW 874 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 744 bits (1921), Expect = 0.0, Method: Composition-based stats. Identities = 89/505 (17%), Positives = 187/505 (37%), Gaps = 21/505 (4%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F + W G E R ++ T + + +L ++ + Sbjct: 392 FYSAMWKAINTTGVWEGEIWNRRKNGEIYPEHLTVTAVKDRNGMVTNYVGVLSDLTQRKA 451 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + I + A D T L NR ++L + + T+G V+ I L +F L+D Sbjct: 452 ----AEEKIENLAFFDPLTKLPNRRLLLDRLKQAMASATRSVTNGAVLFIDLDNFKALND 507 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT------LKEAESIA 325 T+GH + + L + + G ++R+ +F LL +AE++ Sbjct: 508 TYGHPMGDLLLQQVAKRLVSSVR--DGDTVSRFGGDEFVVLLEGFDENPLDAASQAETVG 565 Query: 326 GQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAI 384 Q+ A+ + IG + Q +++M+ A+ A A +G N Sbjct: 566 EQIFAALRQPYLIGTHEYHGTSSIGATLFNDKQQSIDELMKQADIAMYQAKKEGRNVLRF 625 Query: 385 YDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVS 443 +D + E + + + +L+ + V E + R F VS Sbjct: 626 FDPQMQETIAKRTALEGDLRKAIENHQFQLHYQIQVDESRHPFGAEALIRWFHPEHGMVS 685 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE------NLAIQVTVESLIRPRFQRW 497 +++P+ + L + ++ W + L++ V+ + + F Sbjct: 686 PDQFIPLAEESDLILPIGYWVLETACARIQRWQHDAKTSGFVLSVNVSAKQFRQTDFVNQ 745 Query: 498 LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 ++ + Q E + +EL E+ + +I + + LGV+ +++ G S + Sbjct: 746 VQSLIQQYE-INPSLLKLELTESMLLDNIEDTIATMSALKELGVKFSLDDFGTGYSSLQY 804 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 +K L ++ LK+ VR+I ++ +V++++ V A GV + + + L + Sbjct: 805 LKRLPLDQLKIDQSFVRDIAVDASDRAIVRTIIAMAHSLDLDVIAEGVETEEQQKHLSSK 864 Query: 618 GVTGGQGDFFASSQPLDTNVKKYSQ 642 G QG F P++ + Sbjct: 865 GCKNFQGYLFGKPVPIEQFETSLRK 889 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 743 bits (1920), Expect = 0.0, Method: Composition-based stats. Identities = 98/618 (15%), Positives = 220/618 (35%), Gaps = 27/618 (4%) Query: 45 VATAIDTHLVSNDFSVLRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLF 104 T + L + + ++R + L + + RV L + + + + V +S Sbjct: 341 PITDLQQELDNEERDLIRADGSRLPVIKTVSRVVLDGREHLLESFVDISRRKQVENSLKE 400 Query: 105 RELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAG 164 E ++ L + F S ++ L V L QLA Sbjct: 401 SEERYRMLVENQADLVIKTDMTGNLLFVSPSFCKLFGQTEEKLLGKALLPVIMLPEQLAT 460 Query: 165 QELLETRA-----------TRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQH 213 +E + G+R + A+ + R+I + + Sbjct: 461 AAGMEQMICSDTSYYREYLSPTREGKRWIGWALRCIFNQSGQAEAIIGMGRDITDRKT-- 518 Query: 214 SRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTW 273 ++ I A D TGL NR ++L + E+ ++ + L F ++D+ Sbjct: 519 --AESTIEQLAYHDPVTGLPNRTLLHDRLQLAINRAERDSQGVAILFLDLDRFKAINDSL 576 Query: 274 GHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAE-SIAGQLIKAV 332 GH+ ++ + N L + +AR +F L+ A S+ ++++ + Sbjct: 577 GHAMGDQLLRLVGNRLLDCVR--SSDTVARLGGDEFVVLISALDNDHAVGSVVMKILEQL 634 Query: 333 DTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPE 391 + IGI + G+D E+++++A+ A A G N+ + L Sbjct: 635 CEPYQIDDHEVYTSSSIGISLFPRDGRDAEELLKNADMAMYQAKEAGRNTCHFFSPELNM 694 Query: 392 KGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMP 449 + + + + + L R L +P + R G + E + R + V ++P Sbjct: 695 RATERLLLESTMRRALEREEFFLVYQPQMELRSGHIAGIEALLRWRHPDLGVVPPNNFIP 754 Query: 450 MVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQ 504 + + GL ++ W +E +A+ V+ + + LM+ Sbjct: 755 IAEETGLIVPLGEWVLAEACRQAVRWQQEGQPPLRMAVNVSARQFRQRNLGLRIEKILME 814 Query: 505 CEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVE 564 + +EL E+ V ++ +R + +G+ ++++ G S S +K ++ Sbjct: 815 T-GLDPALLELELTESAVMENPEEAILTLRQLKKMGITLSIDDFGTGYSSLSHLKHFPID 873 Query: 565 LLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 LK+ V+++ + + + ++++ V A G+ + + + QR QG Sbjct: 874 RLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVVAEGIEHSEQMEFMHQRHCDTMQG 933 Query: 625 DFFASSQPLDTNVKKYSQ 642 + + + + Sbjct: 934 YYLSRPVTAEEFGTFLKR 951 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 734 bits (1897), Expect = 0.0, Method: Composition-based stats. Identities = 95/496 (19%), Positives = 183/496 (36%), Gaps = 17/496 (3%) Query: 156 RWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSR 215 W G E R + + + +I + Sbjct: 907 MWQAINSTGHWQGEVWDRRKDGSYYPKWLSISTIRGAEGNTEYYIGSFVDISERKA---- 962 Query: 216 LDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEK--VGTHGIVMMIRLPDFNMLSDTW 273 + I A D T L NR +L L + G VM + L F ++DT Sbjct: 963 AEEKISHLAHFDTLTDLPNRSNLQGRLDQALASARREGHGRSVAVMFLDLDRFKNINDTL 1022 Query: 274 GHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVD 333 GH + + L + + ++AR +F +L AE +AG+++KA+ Sbjct: 1023 GHHVGDALLLEVAARLRSSVR--DSDVVARLGGDEFVVVLTGADALAAERVAGKILKALS 1080 Query: 334 TLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK 392 + IGI + G+ E +M++A++A +A G N+ + S+ E Sbjct: 1081 RAYQIEGHALHSTSSIGIAVFPADGESVEVLMQNADAAMYHAKSAGRNNVQFFTASMNEA 1140 Query: 393 GRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NEEVSSAEYMPMV 451 + + L + L+ +P V + +V E + R + V A ++P+ Sbjct: 1141 ASDRRQLEEDLHLALQQKQFVLHYQPQVDAQRRVFAVEALLRWQHPHHGLVPPARFVPLA 1200 Query: 452 LQFGLSEEYDRLQISRLIPLLRYW------PEENLAIQVTVESLIRPRFQRWLRDTLMQC 505 GL + + ++ W + +A+ V+ +P F LR + Sbjct: 1201 EDTGLIVPIGQWVLETACAQIKAWSVDARTRKLQVAVNVSARQFRQPDFVELLRQAIDN- 1259 Query: 506 EKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVEL 565 + R+ +EL E+ V +++ + + LGV +++ G S S++ L ++ Sbjct: 1260 SGANPARLKLELTESLVLDNVADTIDKMNAIKLLGVTFSMDDFGTGYSSLSYLTRLPLDQ 1319 Query: 566 LKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGD 625 LK+ V + + + ++ Q++V +V A GV + ++ Q L G G QG Sbjct: 1320 LKIDRAFVCRLPENRSDAVIAQTIVTMGRSLGLKVVAEGVETEAQRQFLDSHGCDGYQGF 1379 Query: 626 FFASSQPLDTNVKKYS 641 F+ +D Sbjct: 1380 LFSRPLAVDAFEDFLQ 1395 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 731 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 94/491 (19%), Positives = 201/491 (40%), Gaps = 18/491 (3%) Query: 165 QELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYA 224 ++ R + + G + + P S+ + T +Q + ++ I+ A Sbjct: 746 KQGESVRTELVNYRKNGEEIWLEMDILPIANSAGVFTHWVSVQRDITERKAAESRIQHLA 805 Query: 225 AQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFT 284 D+ T L NRL ++L L + ++ G ++ + L +F L+DT GH + Sbjct: 806 FYDMLTNLPNRLLLLDRLEQALLNSMRLKRSGALLFLDLDNFKTLNDTHGHDFGDMLLEQ 865 Query: 285 LTNLLSTFMMRYPGALLARYHRSDFAALLPHRT------LKEAESIAGQLIKAVDTLPNN 338 + L + +AR +F ++ + + +EA +A +++ A+ Sbjct: 866 VAQRLLNSVR--ITDTVARLGGDEFVVVVENLSEQGCNAAQEASLVADKILLALSQPFRL 923 Query: 339 KMLDRDDMIHIGICAWRSGQ--DTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGN 396 + IG+ + + Q +++++ A+ A A G N++ +D ++ Sbjct: 924 SGYEHYSSCSIGVALFCNEQQVTVDELLKRADLAMYEAKAAGRNTFRFFDPAMQALITKR 983 Query: 397 VRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFG 455 + Q L R RLY +P V +G + E + R +S A ++ + + G Sbjct: 984 AAMEEDLRQALRRDEMRLYYQPQVDSQGSLLGAEALVRWEHPQQGLLSPAAFIELAEETG 1043 Query: 456 LSEEYDRLQISRLIPLLRYWPEEN------LAIQVTVESLIRPRFQRWLRDTLMQCEKSQ 509 L + L W L++ V+ L + F + L + + Sbjct: 1044 LILPIGEWVLRTACMQLVAWAGRPETAGLVLSVNVSARQLHQHDFIDRVFSILKET-GAN 1102 Query: 510 RKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLH 569 + + +EL E+ + ++I + + ++ A+GV +++ G S +++K L + LK+ Sbjct: 1103 PQSLKLELTESTLVENIEEMITKMNILKAMGVGFSMDDFGTGYSSLAYLKRLPLSQLKID 1162 Query: 570 PGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFAS 629 VR++ + + +VQ+++ G +V A GV S + Q L + G QG F Sbjct: 1163 RSFVRDVLVDSNDASIVQTIIALGHGLGIEVVAEGVESWEQQQFLEKHGCLEYQGYLFGR 1222 Query: 630 SQPLDTNVKKY 640 QP + +++ Sbjct: 1223 PQPAEQLEREF 1233 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 731 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 96/570 (16%), Positives = 204/570 (35%), Gaps = 33/570 (5%) Query: 98 VGSSDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRW 157 + S+ + + P + + N S + L +IG I L + Sbjct: 311 LRKSEERYRIVLESAPDPVVVYDTEGKVAYFNPAFSRVFGWTLDESIGRNIDFLPVENVP 370 Query: 158 LQRQLAGQ-------ELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAR 210 + + + +ET + G N+ G + L++I Sbjct: 371 ENKLIFEKINCGKTLSGIETYCLTKDGKKVGVNISGAGFFDNHDKLQGSIITLQDITE-- 428 Query: 211 EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQ------EKV--GTHGIVMMIR 262 + + I+ A DV TGL NR F +L L + G + + Sbjct: 429 --RKKTEEEIKFLAYHDVLTGLLNRKSFYTRLEDELIRSYSYDGDRRRIKGHKWALFFLD 486 Query: 263 LPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEA 321 + F ++DT GH +E + L + + + R +F +L + Sbjct: 487 VDRFKYVNDTLGHDVGDELLKVVAVRLKNCLRK--SDYIFRLGGDEFTIILNDLTDDTDM 544 Query: 322 ESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGN 380 +A ++ KA+ K + + IGI + G D E ++++A+ A A + N Sbjct: 545 AKVAQKIRKAIARPCRIKDHELYITVSIGISIYPDDGDDVETLVKNADIAMYAAKEE--N 602 Query: 381 -SWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN 439 + + + + K + + L +Y +P V Q+ E + R Sbjct: 603 QGYRFFIEEMNRKTLERMMLENNLRNALQHDQLIIYYQPLVDSTNQIVGMEALLRWHHPE 662 Query: 440 -EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPR 493 +S ++++P+ + GL + + R W E +A+ ++V P Sbjct: 663 LGLISPSQFIPLAEETGLIVPIGKWVLRCACQQARKWHEMGYTRFYVAVNLSVRQFREPD 722 Query: 494 FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLV 553 + L + + +E+ E+ + +H + ++++ A G+ +++ G Sbjct: 723 LVETIEQIL-EATDLPPDCLKLEVTESGIMEHPEQAIAKMKMLRAKGIHFSIDDFGTGYS 781 Query: 554 STSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQT 613 S S++K ++ LK+ V + ++Q ++++++ A GV ++ + Sbjct: 782 SLSYLKRFPIDTLKIDRSFVIDSTTNKDDQEIIKTIIAMARNLGMDTVAEGVEAKEQQDF 841 Query: 614 LIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 LI G QG +F P + R Sbjct: 842 LIHHGCHMMQGYYFGRPMPAEKFEDMLQTR 871 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 731 bits (1887), Expect = 0.0, Method: Composition-based stats. Identities = 94/482 (19%), Positives = 186/482 (38%), Gaps = 11/482 (2%) Query: 169 ETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDV 228 E + G + P + T Q + + + I+ A D Sbjct: 215 EWWGEFHNRKKNGELYWASASISPITNGNEQITHFIAFQEDITERKQAEETIKQMAYYDT 274 Query: 229 KTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNL 288 TGL NR F+ + L + V+ + L F ++DT GH+ ++ + Sbjct: 275 LTGLPNRHLFNELMHLALAQAHRHNRLLAVLFLDLDRFKHINDTLGHTVGDQLLQASAHR 334 Query: 289 LSTFMMRYPGALLARYHRSDFAALLPHRTL-KEAESIAGQLIKAVDTLPNNKMLDRDDMI 347 L R +AR +F LLP +EA +A ++I A + ++ Sbjct: 335 LKECCRR-DRDTVARRGGDEFIILLPDIDDVQEAVRVAQKIIDAFTQVFVLPDIELFIST 393 Query: 348 HIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQM 406 IGI + G+DTE ++++A+ A A QG + + +Y S+ E+ + + + Sbjct: 394 CIGISIFPNDGRDTETLIKNADMAMYRAKEQGRSRYHLYTSSMDEQAFRRLTMENSLRKA 453 Query: 407 LSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQ 464 L R LY +P V + GQ+ E + R + + +++P+ GL Sbjct: 454 LQREEFSLYYQPKVNIKTGQIVCLEALVRWQNPEMGLILPNQFIPLAEDTGLIIPLGEWV 513 Query: 465 ISRLIPLLRYWP-----EENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAE 519 + + W +A+ + +PR + L + + + +EL E Sbjct: 514 LRTACAQNKTWQLLNYPPMRVAVNFSPRQFQQPRLTDMVEQILGEAD-LAPCWLELELTE 572 Query: 520 ADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKR 579 + Q++ + + ++ LG+ ++++ G S S+IK+L ++ LK+ V +I Sbjct: 573 NVMLQNVEKTVQTLNRLSNLGIHISIDDFGTGYSSLSYIKKLPIQTLKIDRSFVHDINTN 632 Query: 580 TENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKK 639 ++ + +++ V A GV + + + L QG F+ P+ Sbjct: 633 ADDAAIAIAVITMAQSLRLNVIAEGVETLEQMKLLDGLNCPEMQGYLFSKPLPVAEMTTL 692 Query: 640 YS 641 S Sbjct: 693 LS 694 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 729 bits (1884), Expect = 0.0, Method: Composition-based stats. Identities = 89/508 (17%), Positives = 194/508 (38%), Gaps = 21/508 (4%) Query: 149 VMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQN 208 F W + + G+ E R ++ T + L +I Sbjct: 510 DAYFYKEMWERIKRTGEWEGEIWNRRKNGDVYPEHLTITAVKDAGGNVVNYVATLMDITA 569 Query: 209 AREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNM 268 ++ + IR+ A D T L NR ++L L + G G ++ I L +F Sbjct: 570 SKAS----EEEIRNLAFFDPLTRLPNRRLLQDRLQQALASCGRSGKSGAILFIDLDNFKN 625 Query: 269 LSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT------LKEAE 322 L+DT GH + + LS+ + G +AR +F +L + ++ E Sbjct: 626 LNDTLGHDIGDLLLEKVAIRLSSCVRE--GDTVARIGGDEFVVMLEDLSDNILDAAEQTE 683 Query: 323 SIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNS 381 S+ +++ +++ + D+ IG + +++++ A+ A A G N+ Sbjct: 684 SVGSKILASLNVPYQLGIHTYDNSPSIGATLFNDNHNSIDELLKQADIAMYQAKKAGRNT 743 Query: 382 WAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-E 440 +D + + + + + + + +LY + V + E + R Sbjct: 744 MRFFDPRMQQSLSARLALELELRKAIEKDQFQLYYQIQVDETHRPLGAEALLRWMHPEHG 803 Query: 441 EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW------PEENLAIQVTVESLIRPRF 494 ++ AE++PM + GL + L+ W L+I V+ + +P F Sbjct: 804 LMAPAEFIPMAEETGLIVPIGWWVLETACTQLKAWEKDPLTRNLVLSINVSAKQFHQPDF 863 Query: 495 QRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVS 554 ++ + + +EL E+ + +++ + + GV +++ G S Sbjct: 864 VDQVQAAV-DHYGIDPALLKLELTESILLENVDTTIKRMSALKKTGVGFSLDDFGTGYSS 922 Query: 555 TSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTL 614 ++K L ++ LK+ ++ I + + +V +++ V A GV + + Q L Sbjct: 923 LQYLKRLPLDQLKIDQSFMQEITSDSSDMAIVSTIIAMAQSMQMGVIAEGVETEEQRQLL 982 Query: 615 IQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 +++G QG F+ P++ K + Sbjct: 983 LRKGCNHFQGYLFSKPVPVEQFEKLLHR 1010 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 729 bits (1883), Expect = 0.0, Method: Composition-based stats. Identities = 89/533 (16%), Positives = 191/533 (35%), Gaps = 17/533 (3%) Query: 117 MSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRIL 176 + + YQ G ++ P G + + W + GQ + E R Sbjct: 586 LEVNQAYQQITGYDKEEIIGKLPSVMQAGLHEAAYYEGI-WQTLRREGQWVGEIWNRRKS 644 Query: 177 NGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRL 236 + + + + +I Q + ++ A D T L NR Sbjct: 645 GESYPEWLSISQVADAKGSVQNYVAVFTDIT----QRKLSEERLQFLANHDALTHLPNRA 700 Query: 237 FFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRY 296 ++ L ++ T V+ I L F +++DT GH + L + Sbjct: 701 LLQERIDQALFRAQRNKTAIAVLFIDLDRFKIINDTLGHQTGDMLLQEAAKRLKECLRET 760 Query: 297 PGALLARYHRSDFAALLPHRTLKE-AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR 355 +AR +F L+ + +IA +++ + + IGI + Sbjct: 761 --DTVARQGGDEFVVLVEDCGDTDYLNTIARKIMATLAQPFILVGRELFISASIGISVYP 818 Query: 356 S-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRL 414 G DT +++HA++A A G N++ Y + + + + R L Sbjct: 819 DDGLDTASLLKHADAAMYRAKESGKNTFRFYAAEANTNSVELLTLENNLRRAVERNEFVL 878 Query: 415 YQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLL 472 + +P V R ++ E + R +S +++P+ + GL + + Sbjct: 879 HYQPKVDLRSQKIIGAEAVVRWQHPELGMLSPMQFIPLAEETGLIIDIGAWIMRESCRQA 938 Query: 473 RYWPEE-----NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHIS 527 W + +A+ ++ ++ + D L + + +E+ E+ + + Sbjct: 939 VEWQQLTGQNVRVAVNLSARQFRDETLRQTIADALTE-SGLTPDCLELEITESMIMHNAE 997 Query: 528 RLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQ 587 R + V++ + LG V ++ G S ++K ++ LK+ VR+I ++ + Q Sbjct: 998 RAREVLQHFHDLGAHVLIDDFGTGYSSFGYLKHFPIDSLKIDRSFVRDIPDDVDDMAITQ 1057 Query: 588 SLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 +++ +V A GV ++ + L ++G QG F+ V+ Sbjct: 1058 AIIAMAHSLQIKVVAEGVETQEQLAFLKKQGCDQIQGFLFSEPLHSHDFVRML 1110 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 729 bits (1882), Expect = 0.0, Method: Composition-based stats. Identities = 92/507 (18%), Positives = 190/507 (37%), Gaps = 22/507 (4%) Query: 156 RWLQRQLAGQELLETRA-----------TRILNGERGSNVLGTIYEWPPRTSSALDTLLR 204 R++Q + E + G+ + ++ P Sbjct: 644 RFMQSGKTPKATYEDMWAHLTRGEPWKGELFNRRKDGTEYIESVLISPVSQVDGRVMNYL 703 Query: 205 EIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLP 264 I+ + + I D TGL NR + + L ++ G VM + L Sbjct: 704 AIKEDITEKRLTEERIEKLEHFDHLTGLPNRTQLNERFKYALSLAQRSGEQMTVMFLDLD 763 Query: 265 DFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESI 324 F ++DT GHS ++ + L + ++R +F +LP A + Sbjct: 764 HFKDINDTLGHSIGDQLLMDVAKRLKETLR--DEDTVSRQGGDEFILILPGTDENGAAHV 821 Query: 325 AGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWA 383 A +L++AV + + IGI + G++ E + ++A++A G N + Sbjct: 822 AAKLMEAVSQAFQFEQHELVATCSIGIAIYPHDGENFETLSKNADTAMYRVKHDGRNGFC 881 Query: 384 IYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EE 441 + + ++ + L+RG L+ +P ++ ++G V E + R Sbjct: 882 FFTSEMQAHSARTLQLGNALRHALTRGQLHLHYQPQISTQDGHVVGAEALLRWQHPELGS 941 Query: 442 VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQR 496 +S AE++P+ G + I L+ W + L A+ ++ + Sbjct: 942 ISPAEFIPIAEDNGQIIPIGEWVLRTAIKQLKDWMDSGLPPMIMAVNLSAAQFRQSNLME 1001 Query: 497 WLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTS 556 + L + K + + +EL EA V+ ++ G++++++ G S S Sbjct: 1002 LVTSILDE-SKVPHRYLELELTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFGTGYSSLS 1060 Query: 557 WIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQ 616 ++K V LK+ V +I +++ +V +++ S Q A GV + + L Sbjct: 1061 YLKRFKVYKLKIDQSFVHDITDDPDDKAIVAAIINMASSLGMQTIAEGVETAGQLSFLRL 1120 Query: 617 RGVTGGQGDFFASSQPLDTNVKKYSQR 643 +G QG +F+ P + V ++ Sbjct: 1121 QGCNEVQGYYFSKPLPAEQFVSYLQKQ 1147 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 728 bits (1881), Expect = 0.0, Method: Composition-based stats. Identities = 104/616 (16%), Positives = 220/616 (35%), Gaps = 29/616 (4%) Query: 49 IDTHLVSNDFSVLRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELS 108 HL + + ++ S + ++ + + A + S + +R L Sbjct: 208 TGDHLSEAMGVAVLLYLGFMIASIRRINQNICE-NIILRIEAAAREGKVRESEERYRLLL 266 Query: 109 VPLIK---HPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQ 165 L H L + Y + + + + L L++ L G+ Sbjct: 267 SHLPVGIFHYNTDLVITYCNDRLAELLHNSVEHVIGLDMKLVKDQAILPS--LRKALEGE 324 Query: 166 EL--LETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSY 223 + E + + T + + ++++I H + I + Sbjct: 325 RSNFEGHYLATYSDAEGWAYITCTPFHDHNGQIAGGIAIVQDITE----HKAAEEKINNL 380 Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A D TGL NR ++L L + G G ++ I L +F L+DT GH + Sbjct: 381 AFYDPLTGLPNRRLLLDRLQHALASSARSGREGALLFIDLDNFKALNDTLGHDMGDLLLR 440 Query: 284 TLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAG------QLIKAVDTLPN 337 + L++ + G +AR +F +L + E+ A +++ + Sbjct: 441 QVAQRLASCVRE--GDSIARLGGDEFVVMLEDLGGHDLEAAAQTEAVGEKILAMLGLPYQ 498 Query: 338 NKMLDRDDMIHIGICAWRSGQDT-EQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGN 396 + IG + + E++++ A+ A A G N+ +D + + Sbjct: 499 LVAHEYRCTPSIGATLFSGHELAKEELLKRADIAMYQAKQAGRNTVRFFDQQMQDAVTAR 558 Query: 397 VRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFG 455 V + + L R RL+ + V G+ E + R V +++ M + Sbjct: 559 VALEGELHKALDRQQFRLHYQIQVDASGRPLGAEALIRWMHPERGLVPPDQFIGMAEETD 618 Query: 456 LSEEYDRLQISRLIPLLRYWP------EENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQ 509 L + + L+ W + LA+ V+ + F +R T+ + Sbjct: 619 LILPIGQWVMDTACAQLKTWQQHAPTRDLVLAVNVSATQFHQLDFVFQVRATVQR-HAID 677 Query: 510 RKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLH 569 K + +EL E+ + ++I + + +GV+ +++ G S ++K L ++ +K+ Sbjct: 678 PKLLKLELTESMLLENIEDTIRTMNALKEIGVQFSLDDFGTGYSSLQYLKRLPLDQIKID 737 Query: 570 PGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFAS 629 VR+I + ++ +V +++ V A GV + + Q L G T QG F Sbjct: 738 QSFVRDIASDSNDREIVGTIIAMAQNLYLDVIAEGVETEEQRQFLQDNGCTHFQGYLFGK 797 Query: 630 SQPLDTNVKKYSQRYS 645 P++ + Sbjct: 798 PVPVEQFEAMLQPDRA 813 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 727 bits (1879), Expect = 0.0, Method: Composition-based stats. Identities = 104/628 (16%), Positives = 226/628 (35%), Gaps = 31/628 (4%) Query: 39 SHRVQAVATAIDTHLVSNDFSVLRPQITELMMSADI-VRVDLLHGDKQVYTLARNGSYRP 97 + A A H+ + + ++ L+ +DI + + + L + Sbjct: 251 DSLLAARAMLEQKHIRHIGITRMDGELVGLLSFSDILATLQYEYVHRLDEALKERDAALL 310 Query: 98 VGSSDLFRELSVPLIKHPGMSLRLVYQD-PMGNYFHSLMTTAPLTGAIGFIIVML----- 151 DL V G+ + Q N + MT IG +L Sbjct: 311 RSRKDLNLARKVIEASLDGIMIVDSTQKIEFVNPAFTHMTGYTAEEIIGKNPNVLKSGHH 370 Query: 152 ---FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQN 208 F + + E R + + + + +I Sbjct: 371 DETFYKHMYTVLEAQDYWQGEIWNRRKNGEIYPEWLTINVIRDDTGDITQYAAIFSDITE 430 Query: 209 AREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNM 268 + + I++ A DV T L NR F ++L + + + G +M + L F Sbjct: 431 ----RKKTEERIKNLAYFDVLTALPNRRLFTDRLQIAIANAHRHGQQLAIMFLDLDLFKR 486 Query: 269 LSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL-KEAESIAGQ 327 ++D+ GH ++ +S + G +AR +F LLP ++ +A + Sbjct: 487 INDSLGHGVGDQVLVETAARISHCVRE--GDTVARLGGDEFTVLLPELDHLEDVAKLAER 544 Query: 328 LIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYD 386 +I V + IGI + G E ++++A++A A G NS+ +Y Sbjct: 545 VIAHVKQPFLVDDNELYVTTSIGIAVYPEDGTTVEALIKNADTAMYRAKDLGRNSYQLYT 604 Query: 387 DSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSS 444 ++ + + + + L+R RL + V +G++ E + R VS Sbjct: 605 AAMNARSFERLTMESSLRHALTREEFRLVYQVKVDSEDGRMSGVEALVRWHHPEMGLVSP 664 Query: 445 AEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLR 499 +++P+ G+ + + ++W + L A+ V+ + + + Sbjct: 665 VDFIPLAEAMGVISDIGEWVLRTACRQCKHWMDLGLPPVRIAVNVSAQQFVETDVPEVVA 724 Query: 500 DTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIK 559 L + + + +EL E + Q + + V++ + A+GVR++++ G S S++K Sbjct: 725 RALRET-GLPPQYLELELTETVLMQRVDEVVAVLKSLRAMGVRISIDDFGTGYSSLSYLK 783 Query: 560 ELNVELLKLHPGLVRNIEKRT-----ENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTL 614 + ++ LK+ V +I + +V +++ + A GV + + + L Sbjct: 784 RMPIDALKVDRSFVNDIFDGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGVETPEQAEFL 843 Query: 615 IQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 +G QG + + + + + Sbjct: 844 RSKGCDEVQGYLISRPVSGEDLISLFDR 871 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 727 bits (1878), Expect = 0.0, Method: Composition-based stats. Identities = 102/504 (20%), Positives = 193/504 (38%), Gaps = 21/504 (4%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F + W Q G+ E R + T ++ + +I Sbjct: 632 FYSAMWQQLTTLGRWRGEIWDKRKSGQIYPKWMTITAVRDENGKTTEYVAIFSDIT---- 687 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 Q + IR+ A D T L NR ++L L + G V+ + + F L+D Sbjct: 688 QRKLAEEEIRNLAFYDALTRLPNRRLLLDRLHAALSVSARSRRFGAVLFLDMDRFKTLND 747 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT------LKEAESIA 325 T GH + + + + +AR +F L+ K +IA Sbjct: 748 TMGHDYGDLLLIEVAERIKLCVREI--DTVARLGGDEFVILVEEIDTRAEETSKHIAAIA 805 Query: 326 GQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAI 384 ++ A+ K IG+C +R + T+ +++HA+ A A G N+ Sbjct: 806 EKIRSALSVPYRLKEKHHHSSPSIGVCLYRGIEESTDDLLKHADMAMYQAKDSGRNAVRF 865 Query: 385 YDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NEEVS 443 +D + + V + L +LY + V + + E + R VS Sbjct: 866 FDPLMQQAVEARVTLENDLRHALPNDQLQLYYQIQVDNDRRAIGAEALVRWIHPIRGMVS 925 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN------LAIQVTVESLIRPRFQRW 497 A ++P+ + L E + L W + LA+ V+V+ + F Sbjct: 926 PAHFIPIAEETSLILEVGAWVLKTACLQLAVWADRPMTCNLILAVNVSVQQFKQVGFVEH 985 Query: 498 LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 + + L++ +R+ +EL E+ V +S + + + +LGVR++++ G S S+ Sbjct: 986 IAE-LIRAYCIVPQRLKLELTESVVLNDVSDIVQKMCALKSLGVRLSMDDFGTGYSSLSY 1044 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 +K L ++ LK+ VRNI + ++V++++ V A GV + ++ L Q Sbjct: 1045 LKNLPLDQLKIDQSFVRNIATDENDAVMVKTIIAMAQNFRLNVIAEGVETEAQLAFLKQN 1104 Query: 618 GVTGGQGDFFASSQPLDTNVKKYS 641 G QG +F P++ + Sbjct: 1105 GCMCYQGYYFGKPAPIEQFQSQLE 1128 >UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6X8_9PROT Length = 713 Score = 726 bits (1876), Expect = 0.0, Method: Composition-based stats. Identities = 105/640 (16%), Positives = 227/640 (35%), Gaps = 64/640 (10%) Query: 32 NAIQYKFSHRVQAVATAIDTHLVSNDFSVLRPQITELMMSADIVRVDLLHGDKQVYTLAR 91 + V + VL L+ ++ H +++Y Sbjct: 109 RHGDDRGQRFVGVTFNIDERKRKEEQLIVLEQDTRTLIENSPDTVARYDHECRRIYVNPA 168 Query: 92 NGSYRPVGSSDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVML 151 S P G+ + + + P A + L Sbjct: 169 LASSFPGGAEKILGKKPSEIPGGPEFD----------------KFEAKIVEVFATGNNAL 212 Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F E + E +++ T +++ + R+I E Sbjct: 213 F----------------ELKWQGKDGKELCNHIRLTAERDSSGRLTSVLAIGRDITELYE 256 Query: 212 QH---SRLDTLI-------RSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMI 261 R + + +S A D TGL NR F ++L L + G G ++ I Sbjct: 257 SRAALKRANAQLENMNDLLQSQATSDPLTGLPNRRFMLDRLKHALASSSRSGREGALLFI 316 Query: 262 RLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA 321 L +F L+DT GH ++ + + L T + G +AR +F +L + K+ Sbjct: 317 DLDNFKTLNDTLGHDVGDQLLQQVAHRLETCVRE--GDTVARLGGDEFVVMLEDLSEKDL 374 Query: 322 ESIAG------QLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNA 374 E+ A +++ A++ + + IG + Q +++++ A+ A A Sbjct: 375 EAAAQTEAVGEKILAALNQPYQLGKHEYRNTPSIGATLFNDHQQSLDELLKQADIAMYQA 434 Query: 375 GLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-----EGQVHHR 429 G N+ +D + E + + L L+ + V + Sbjct: 435 KRAGRNALRFFDPQMQETINSRATLENELRKALELHQFYLFYQVQVDSVQEDGSHRATGA 494 Query: 430 ELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPE------ENLAI 482 E + R VS A+++P+ + GL + L+ W LA+ Sbjct: 495 EALIRWAHPERGLVSPAQFIPLAEETGLIVPIGLWVLDTACAQLKTWQHDALTRGLVLAV 554 Query: 483 QVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVR 542 V+ + +P F + + + K + +EL E+ + ++I + + +G+R Sbjct: 555 NVSAKQFRQPDFVAQVDAAVQR-HGIDPKLLKLELTESLLLENIQDTIATMNALREIGIR 613 Query: 543 VAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYA 602 +++ G S ++K+L ++ LK+ + ++ + ++ +V++++ + V A Sbjct: 614 FSLDDFGTGYSSLQYLKQLPLDQLKIDQSFICDLVSDSSDRAIVRTIIAMAQSLNLNVIA 673 Query: 603 TGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 GV + ++ Q L+++G QG F+ P++ + + Sbjct: 674 EGVETEAQRQILLEKGCIHHQGYLFSKPVPINQFEAQLRR 713 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 724 bits (1869), Expect = 0.0, Method: Composition-based stats. Identities = 92/497 (18%), Positives = 197/497 (39%), Gaps = 15/497 (3%) Query: 153 LAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQ 212 A W Q R I + G+ + P R + T I+ + Sbjct: 806 YAAMWTQL----NSGQMWRGELINRRKDGTEYVELARISPLRHTDGRVTNYLSIKEDITE 861 Query: 213 HSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDT 272 +++ IR A D+ TGL N+ ++ ++ ++ H V+ + + F ++DT Sbjct: 862 QKQVEARIRQLAHFDLLTGLPNQTLLKDRAGFAMQMAQRSAHHLAVLFLDIDHFKNINDT 921 Query: 273 WGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAV 332 GH +E L + + L+R+ +F +LP A +A ++++ V Sbjct: 922 LGHRIGDELLVHLAKRMKLLLR--DEDTLSRFGGDEFILVLPDTDADGAAHVAEKILETV 979 Query: 333 DTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPE 391 + + IGI + G D +++ + A+ A A G N++ + + Sbjct: 980 AKTCYIEQHELVVTPSIGIAMYPSDGMDFDKLYQSADVAMYRAKQDGRNNFRFFTSEMQA 1039 Query: 392 KGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMP 449 + + + Q LSR L+ +P ++ ++G++ E + R + +S AE++P Sbjct: 1040 RSARRLLLENALRQALSRNQFELHYQPQISMQDGKIVGAEALLRWYHPELGSISPAEFIP 1099 Query: 450 MVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQ 504 + + GL + + ++ W + +AI ++ + R + L + Sbjct: 1100 VAEESGLILSIGEWVLRTAVQQVKRWQDAGHPPVTVAINLSAVQFRQARLSELVMQILHE 1159 Query: 505 CEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVE 564 I +EL E+ + V+ ++ G+R++++ G S S++++ V Sbjct: 1160 AN-LAPHWIELELTESVAMDNPLVAIGVMNDLHGCGIRMSIDDFGTGYSSLSYLRKFKVN 1218 Query: 565 LLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 LK+ VR++ E++ +V +++ S Q A GV + + L +G QG Sbjct: 1219 KLKIDQSFVRDLADDIESRAIVTAIITLASSMGFQTIAEGVETAGQLAFLRLQGCNEVQG 1278 Query: 625 DFFASSQPLDTNVKKYS 641 +F+ + Sbjct: 1279 YYFSRPLTVALFEAFVL 1295 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 724 bits (1869), Expect = 0.0, Method: Composition-based stats. Identities = 96/505 (19%), Positives = 196/505 (38%), Gaps = 16/505 (3%) Query: 151 LFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAR 210 F W + G E R ++ T P T + + +I Sbjct: 338 EFYRHLWQSLREHGFWQGEVINRRKDGKFYTEHLTITGIRGPDGTFTHYAGIFSDIT--- 394 Query: 211 EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLS 270 Q + + A D T L NR +L L + G +M + L F ++ Sbjct: 395 -QRKLNEERLHYLANHDPLTDLPNRTLLMERLGAALTRAHRQGKRVALMFLDLDRFKFIN 453 Query: 271 DTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLI 329 DT GH+ ++ T+ + L+ + +AR +F +L L+ A +LI Sbjct: 454 DTLGHAVGDKLLQTVASRLTGSLR--ASDTVARLGGDEFNIVLEDIRDLRGVAQTAQKLI 511 Query: 330 KAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDS 388 V + D +GI + G E + +A++A A +G N++ + Sbjct: 512 DRVQGMVTLDGHDVYVTASVGIAIYPDDGSTPEVLRMNADTAMYRAKERGKNNFQFFTAD 571 Query: 389 LPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIF-DGNEEVSSAE 446 + +R + + + L+R +L+ +P V G ++ E + R VS A+ Sbjct: 572 MNASTLARLRLESNLHRALARQEFQLHFQPKVDLAHGHIYGMEALLRWRSHELGPVSPAD 631 Query: 447 YMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDT 501 ++P+ + L + + R+W L A+ ++ + + + +R Sbjct: 632 FIPIAEESNLISTIGEWVLEQACRQARHWLNLGLLPGTVAVNLSSKQMTQGDIVATVRRI 691 Query: 502 LMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKEL 561 L + + +E+ E+ + + ++ + ALGVR+A++ G S S++K+L Sbjct: 692 L-EHSNLPGHYLELEITESVAMDNTGEMIRTLKNLKALGVRIAIDDFGTGYSSLSYLKQL 750 Query: 562 NVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTG 621 +++LK+ V ++ + ++ + +++ + Q A GV Q L+ G Sbjct: 751 PIDVLKIDRSFVTDLHEDRDDAAIASAIISMGQSLNLQPVAEGVEREEHRQFLLDHGCQY 810 Query: 622 GQGDFFASSQPLDTNVKKYSQRYSV 646 GQG F+ P T + + ++ Sbjct: 811 GQGYLFSRPVPAATMEQLLLESQAL 835 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 723 bits (1868), Expect = 0.0, Method: Composition-based stats. Identities = 86/494 (17%), Positives = 181/494 (36%), Gaps = 15/494 (3%) Query: 156 RWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSR 215 R + E R S + + + + +I Sbjct: 557 REAALKKNDIWQCEVSGYRKNGEHFLSWQTVIPVKDENGDTQQIIYIFSDITE----RKL 612 Query: 216 LDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGH 275 + I + A D T L NR+ F Q+ T LE ++ T VM I L F M++DT GH Sbjct: 613 FEEHIYNLAHHDSLTQLPNRVAFQLQMNTALERAKRSKTQMAVMFIDLDHFKMINDTSGH 672 Query: 276 SQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESI-AGQLIKAVDT 334 + + + + +++R+ +F LL + A ++ A +L+ Sbjct: 673 PVGDLLLQQVAERFKRALRKE--DVISRFGGDEFTVLLSNTRTDNATTVVARKLLACFYE 730 Query: 335 LPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKG 393 + IGI + G + +M +A+SA A +G N + Y + + Sbjct: 731 PFKLPSSEVVISASIGIGVFPDNGDSVDSLMMNADSAMYRAKEKGRNCFQFYTKEMNQYA 790 Query: 394 RGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVL 452 + + + + L R L+ +P G++ E + R + +S E++ M Sbjct: 791 QERLELELDLRKALERDEFVLHYQPQFDPNGRIIGCEALIRWQHPDKGLLSPGEFINMAE 850 Query: 453 QFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEK 507 GL + I + W + +++ ++ + +++ + Sbjct: 851 ITGLIVPIGKWVIDTACMQHKMWLSQGYPALNISVNLSGRQFLHHDLLETVKNAIT-TSG 909 Query: 508 SQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLK 567 + +EL E+ + ++ + +++LG+ ++++ G S S +K V LK Sbjct: 910 ITPSCLELELTESIMMVNVEETIRTLNAISSLGIHMSIDDFGTGYSSMSCLKRFPVNKLK 969 Query: 568 LHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFF 627 + VR + + E+ +V+S++ + V A GV + + + L QG +F Sbjct: 970 IDQSFVRGLPQDKEDVAIVKSIIVMAHALNLTVIAEGVETLEQLEFLKSSRCEEFQGYYF 1029 Query: 628 ASSQPLDTNVKKYS 641 + + Sbjct: 1030 SRPILAADIEQYLQ 1043 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 723 bits (1867), Expect = 0.0, Method: Composition-based stats. Identities = 81/501 (16%), Positives = 191/501 (38%), Gaps = 15/501 (2%) Query: 151 LFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAR 210 F W + G E R + + + + +I + Sbjct: 970 EFYQNVWKSIKEKGHWQGEIWNRRKNGEIFPEWLSISRGLDTSGNVTEYVGIFNDISKVK 1029 Query: 211 EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLS 270 E + I+ A D TGL NR ++L + ++ T ++ I L F ++ Sbjct: 1030 ES----EEKIKHLAHYDPLTGLVNRELLMDRLNHSISTADRNNTPLALLFIDLDHFKNVN 1085 Query: 271 DTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIK 330 DT GH ++ + + + +AR +F +LP A +A ++++ Sbjct: 1086 DTLGHQVGDQLLIEVGQRILKILR--DEDTIARQGGDEFIVVLPDTGENGAVHVAEKILE 1143 Query: 331 AVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSL 389 ++ N K IGI + G+D + ++++A++A A G N + + + Sbjct: 1144 SISDQLNLKPYKLFITPSIGIAVYPQDGKDADSLLKNADTAMYQAKNDGRNVYRFFTMEM 1203 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEY 447 ++ + + L LY +P G + E + R VS E+ Sbjct: 1204 QAHSSRIMQIESALRVALFDQQFELYYQPQTCAKSGSIIGVEALIRWNHPEMGPVSPQEF 1263 Query: 448 MPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTL 502 +P+ Q G + I ++ W E +A+ ++ + + L Sbjct: 1264 IPVAEQSGQILAIGWWVLRTAIRQIKIWSEHGKPCIKVAVNLSAVQFRYEDLPKQVMKIL 1323 Query: 503 MQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELN 562 + E + + +EL E+ + + ++ + G++++++ G S S++K Sbjct: 1324 EE-EGVSPEFLELELTESVAMANPEAVIEMMDKLVGHGIKMSIDDFGTGYSSLSYLKRFK 1382 Query: 563 VELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGG 622 V LK+ +R++ ++++ ++++++ + A GV ++++ L ++ Sbjct: 1383 VSKLKIDQSFIRDLAVDSDDRSIIEAIISLSKALGLKTIAEGVETQAQLDFLQEKQCDEI 1442 Query: 623 QGDFFASSQPLDTNVKKYSQR 643 QG +++ + + Y ++ Sbjct: 1443 QGFYYSKALTPEAFDAFYEKQ 1463 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 722 bits (1865), Expect = 0.0, Method: Composition-based stats. Identities = 73/485 (15%), Positives = 178/485 (36%), Gaps = 15/485 (3%) Query: 168 LETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTL---IRSYA 224 +E ++ + T+ +I + + L + A Sbjct: 269 VELDLMHKDGSLHTYLMVKFPLRGKEGKVFGVCTIGTDISERKLAENALREQQSRLNYMA 328 Query: 225 AQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFT 284 D T L NR F +++ L + + +M++ + F +++D+ GH + Sbjct: 329 FHDALTSLPNRSLFYDRIYHGLARARRSNSRVALMLLDIDRFKIVNDSLGHDAGDILLKA 388 Query: 285 LTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDR 343 + L+ + +AR +F +L + + +A +L+ + + Sbjct: 389 IAMRLTEGVR--DMDTVARLGGDEFVVVLEGIHDVDDVIFVANKLLATLSRPLDISGHSI 446 Query: 344 DDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTL 402 + IG+ + G DT++++++A+ A A G N+ Y + + Sbjct: 447 SATVSIGVSIFPEDGADTDELLKNADIAMYKAKEAGKNNCQFYTKGMNATAVNYLLLEND 506 Query: 403 IEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEY 460 + + + + LY +P + G + E + R VS A ++P+ + GL Sbjct: 507 LRRAIEQNQLALYYQPQIDLKTGDMTGVEALVRWQHPERGLVSPAHFIPLAEETGLIVPI 566 Query: 461 DRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIII 515 + + W + +A+ ++ + F + L + + K + + Sbjct: 567 GEWVLREACKQKKIWLDTGKNVGKVAVNLSPRQFRQKNFPGKVEAILQET-GLEAKYLEL 625 Query: 516 ELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRN 575 E+ E+ +H + +N +G +A++ G S ++++ ++ LK+ + + Sbjct: 626 EITESCAMEHAGETINQLNQLNQMGTFLAIDDFGTGYSSLAYLQRFPIQKLKIDRSFIHD 685 Query: 576 IEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDT 635 I + + ++++ +V A GV + S+ + L +G QG +A Sbjct: 686 IHDDANDAAIAKTIIGLAHNMQLRVVAEGVETESQAEWLRAKGCDQVQGFLYAKPMTAKQ 745 Query: 636 NVKKY 640 + Sbjct: 746 LESHF 750 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 93/500 (18%), Positives = 187/500 (37%), Gaps = 16/500 (3%) Query: 151 LFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAR 210 F W + E R V + S + +I + Sbjct: 441 EFYEAFWHALRANDLWRGEIWNKRKNGEIFPEWVTISALRDETSQISHYVAVFLDITERK 500 Query: 211 EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLS 270 ++ + I A DV TGL NR +++ ++ V+ I L F ++ Sbjct: 501 KE----EERINYLANYDVLTGLPNRYLLSDRIEQAFSSAQRNNFKVAVLFIDLDYFKNIN 556 Query: 271 DTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL-KEAESIAGQLI 329 D+ GH + + L T + R +AR +F ALL +E +A ++I Sbjct: 557 DSLGHDIGDALLKLVAARLKTCLRR--SDTIARLGGDEFVALLSELDSSEEVIFVAEKMI 614 Query: 330 KAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDS 388 +++ IGIC + G+ + +++ +A+ A A G N++ Y Sbjct: 615 ESLTEKFTLGEYQLSITPSIGICIYPDDGETSVELLRNADLAMYQAKDDGRNNFKFYSPD 674 Query: 389 LPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAE 446 + K ++ T + + + +Y +P V+ G++ E + R +S A Sbjct: 675 MNRKALERLKLETFLRVAIVQQQLSVYYQPKVSVLSGKMTGMEALLRWQHPELGFISPAV 734 Query: 447 YMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDT 501 ++P+ + GL E + + R W + +A+ ++ L + F + Sbjct: 735 FIPIAEETGLINEIGDWVLRQSCLQARLWQAQGYDIVPIAVNLSARQLKQDNFAARVVTI 794 Query: 502 LMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKEL 561 L + +++E+ E+ + ++ + GVR+A++ G S S +K L Sbjct: 795 LREA-GLDAHYLVLEITESMLMSTGESGLQILEQLRDDGVRLALDDFGTGYSSLSRLKNL 853 Query: 562 NVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTG 621 ++ LK+ VR+I + +V + + +V A GV ++ + + Sbjct: 854 PLDSLKIDQSFVRDIVTDPNDASIVSATAVLAHALNLKVTAEGVETQEQLDFIRMLNCEE 913 Query: 622 GQGDFFASSQPLDTNVKKYS 641 QG F+ P VK + Sbjct: 914 YQGYLFSRPIPASEVVKYFL 933 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 96/484 (19%), Positives = 184/484 (38%), Gaps = 11/484 (2%) Query: 166 ELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAA 225 + I G + + P R + T I+ I S A Sbjct: 374 RGESWQGEFINRRHNGEERIDLVRVSPVREADGRITHYLAIEEDITNQKNAQARIESLAH 433 Query: 226 QDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTL 285 DV TGL NR D + L E+ VM + L F ++DT GH+ + L Sbjct: 434 FDVLTGLPNRALLDERAQRALRLAEEDQATLAVMFLDLDHFKNINDTLGHNLGDTLLVEL 493 Query: 286 TNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDD 345 L + R L+R +F LLP + A+ IA +L++A++ + + Sbjct: 494 AQRLRAVLRR--DDTLSRLGGDEFVLLLPGANRESAKKIAQELMRAINEPYRIGSHELNV 551 Query: 346 MIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIE 404 M IGI + G D E + ++A+ A A +G N++ + + ++ + Sbjct: 552 MASIGIAVYPADGMDFETLCKNADVAMYRAKQEGRNAYRSFTQEMQAYSTRYLQVLNALR 611 Query: 405 QMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDR 462 Q +++ ++ +P ++ G V E + R +S AE++P+ + GL + Sbjct: 612 QAIAQEQLHVHYQPQISLISGDVIGAEALLRWHHPELGNISPAEFIPIAEESGLILQIGE 671 Query: 463 LQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIEL 517 + + + W + L A+ ++ + L + E + + +EL Sbjct: 672 WVLRVAVAQAKKWHQLGLDKLIIAVNLSAVQFRHAGLPNLVMQILKE-EDFPPQYLELEL 730 Query: 518 AEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIE 577 E ++ ++ GVR++++ G S S++K+ LK+ VR+I Sbjct: 731 TEGVAMHDPQGAIAMMNSLHERGVRMSIDDFGTGYSSLSYLKQFKAYKLKIDQSFVRDIS 790 Query: 578 KRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNV 637 E++ +V +++ Q A GV + + L + G QG ++ P Sbjct: 791 TDAEDKAIVSAIIGMAKNLGLQTIAEGVETAEQQAFLREEGCHEAQGYHYSKPLPAADFE 850 Query: 638 KKYS 641 Sbjct: 851 TFIL 854 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 98/500 (19%), Positives = 193/500 (38%), Gaps = 17/500 (3%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F W + G E R + S ++ +I ++ Sbjct: 570 FYQAMWHSLKTTGHWQGEIWNRRKSGELYPQILTINTVADSQGRPSHYVGVMTDISQLKQ 629 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 +RL+ D T L NR ++L LE ++ G V+ + L F ++D Sbjct: 630 SEARLE----HLVHYDPLTNLPNRRLVQSRLEHALERADRQGGRVAVLFVDLDRFKTVND 685 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIK 330 + GH + L LS + LAR +F LL + ++A ++A L+ Sbjct: 686 SLGHPSGDVLLELLARRLSERVRE--DDTLARLGGDEFLVLLENLQRPEDAAAVAESLLS 743 Query: 331 AVDTLPNN-KMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDS 388 + + + IGI + G +++HA+ A A +G N++ Y S Sbjct: 744 LLQQPFHLPNGQELYVGASIGISLYPDDGHTVTDLIQHADVAMYQAKEEGRNTYRFYTPS 803 Query: 389 LPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG-NEEVSSAE 446 L + R + + + L+ L+ + + R+G++ E + R V+ Sbjct: 804 LTQTARERLGLEARLHRALASEEFVLHYQAQIDMRDGRLIGCEALVRWHSATEGLVAPDR 863 Query: 447 YMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDT 501 ++P+ + GL + + + W L A+ ++ L P + Sbjct: 864 FIPLAEETGLIVPLGEWVLRQACADCQSWRARGLTDLTVAVNLSGRQLRSPDLVERVTRV 923 Query: 502 LMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKEL 561 L + +R+ +EL E+ + + +R + ALGVR++++ G S +++K L Sbjct: 924 LRET-GLPAERLKLELTESMIMDQREQALERLRALKALGVRLSIDDFGTGYSSLAYLKRL 982 Query: 562 NVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTG 621 ++ LK+ VR+I + + + + +++ V A GV + + LI++G T Sbjct: 983 PIDELKIDRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEGVETPEQCDFLIRQGCTA 1042 Query: 622 GQGDFFASSQPLDTNVKKYS 641 GQG F P + + Sbjct: 1043 GQGYLFGRPLPAEAFAQVMR 1062 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 93/484 (19%), Positives = 184/484 (38%), Gaps = 16/484 (3%) Query: 167 LLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQ 226 E R R + L + R+I + + I+ A Sbjct: 101 REEPVVDRQSGRIRWLLTSKFPVFNDTGKTIGLVGIGRDITE----RKQSEEQIQYLATH 156 Query: 227 DVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLT 286 D T L NR F LA +E + V+ I L F ++DT GH ++ T+ Sbjct: 157 DSLTALPNRFMFSKLLAVAIESARRHQRQLAVLFIDLDRFKNINDTLGHDAGDQLLITMA 216 Query: 287 NLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDD 345 N T + ++ R +F LLP + +A +A +++ A + + Sbjct: 217 NRFRTCLR--TSDIVGRLGGDEFVILLPELESHDQAARVAQKILSAAIQPLDVHGQECRV 274 Query: 346 MIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIE 404 IGIC + +D + +M++A+ A A +G N++ Y L + + + Sbjct: 275 TASIGICLYPEDAEDEQALMKNADIAMYRAKEEGKNNYQFYSPDLKVRSLERLMLENNLR 334 Query: 405 QMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDR 462 + L R L+ + G++ E + R +S A ++P+ + GL R Sbjct: 335 KALERHEFFLHYQAKRNLKTGKIAGVEALVRWQHPELGTISPAHFIPLAEETGLIVHLGR 394 Query: 463 LQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIEL 517 + W ++ L A+ ++ + + L + + + +E+ Sbjct: 395 WVLRAACTQGVIWQQQGLPPICIAVNLSARQFFDDNLINDIANALRE-SGLAPELLEMEI 453 Query: 518 AEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIE 577 E + Q R ++ + ALGVR+A++ G+ S + IK ++ LK+ +R+I Sbjct: 454 TEGMIMQDAERAIRILTGIKALGVRLAIDDFGVGYSSLAHIKRFPIDTLKVDSSFIRDIP 513 Query: 578 KRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNV 637 E++ + ++++ S V A GV ++ + L QG +F+ + Sbjct: 514 ANREDRAITEAIIAMGKTLSLTVIAEGVETQEQENFLRDSACDQTQGYYFSKPVSPEEFT 573 Query: 638 KKYS 641 + Sbjct: 574 RFML 577 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 98/496 (19%), Positives = 190/496 (38%), Gaps = 15/496 (3%) Query: 159 QRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDT 218 +R+ + E R G + V+ T+ + R+I R + Sbjct: 509 KRKSEDYSVEEVELGRRDGGTVWAEVVTTLGLNRRSGRVEFRAVARDISERRA----AEA 564 Query: 219 LIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQV 278 I+ A D TGL NR ++ ++ VM L F ++DT GH Sbjct: 565 EIQRLAHYDQLTGLPNRSLVKDRFRYAASLTQRRRGQLAVMFFDLDHFKNINDTLGHDFG 624 Query: 279 EEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNN 338 + + L + + G + R +F LLP + A +A +L++AV Sbjct: 625 DRLLVEVARRLESVLR--GGDTVCRLGGDEFVFLLPDTDAEGAARVAAKLLEAVAQPLVL 682 Query: 339 KMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNV 397 + IGI + G D + + +A++A A +G N + + +++ + + Sbjct: 683 DHQELTVTPSIGIAMYPDDGTDFDTLSRNADAAMYQAKREGRNGFRFFTEAMQARSTRTL 742 Query: 398 RWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFG 455 + L RG L+ +P V+ +G+V E + R VS E++P+ G Sbjct: 743 LLANALRHALDRGQFSLHYQPQVSLADGRVVGAEALLRWTHPEFGPVSPGEFVPIAESNG 802 Query: 456 LSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQR 510 L + + + R W +E L A+ ++ P + + + Sbjct: 803 LIAQIGEWVLREAVAQSRRWLDEGLPPLVMAVNLSAAQFRNPNLPELVSQVIEEA-GLPP 861 Query: 511 KRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHP 570 ++ +EL EA V+ + A G+R++++ G S ++K V LK+ Sbjct: 862 HQVELELTEAVAMDDPQSAVRVMDALFARGIRMSIDDFGTGYSSLGYLKRFKVGKLKIDQ 921 Query: 571 GLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASS 630 VR+I +++ +V +++ A GV + + L Q+G QG +F+ Sbjct: 922 SFVRDIGDDPDDKAIVSAIIHLAGSLGMLTVAEGVETLDQLDFLRQQGCDTVQGYYFSRP 981 Query: 631 QPLDTNVKKYSQRYSV 646 P + V + ++ Sbjct: 982 LPAEAFVGYLQESGAL 997 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 84/492 (17%), Positives = 188/492 (38%), Gaps = 16/492 (3%) Query: 158 LQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLD 217 + R L+ + T V + +LR+I R + Sbjct: 372 INRILSEKVCFLGEHTVRAEDGSMVEVDLNANLVSYGEQQVICMVLRDISE----RKRFE 427 Query: 218 TLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQ 277 + A D TGL NR F ++L L +E+ G V+ + L F +++DT GH Sbjct: 428 GELMHMAHHDALTGLPNRTLFFDRLRQGLYKKERSGKMLAVIYLDLDRFKIINDTLGHHT 487 Query: 278 VEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLP 336 + + + L + + ++R +F ++ T ++ +A +++ Sbjct: 488 GDMLLKEVADRLRGVVRK--ADTISRLGGDEFTIIIDEIATPADSLLVAEKILHVFSAPF 545 Query: 337 NNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRG 395 + + +G+ + G E+++++A++A +A +G N++ + + + + Sbjct: 546 RLEKHEMFITASMGVTLYPNDGDTAEKLLKNADTAMYHAKEEGRNTYQFFSEEMNSRVSE 605 Query: 396 NVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFDGN-EEVSSAEYMPMVLQ 453 + T + L+R L+ +P V G++ E + R + ++P+ + Sbjct: 606 RLSMETGLRHALARNEFLLHYQPRVNTTTGRIVGVEALIRWQQPQKGLILPDAFIPLAEE 665 Query: 454 FGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKS 508 GL + R W E +++ ++ +R L + Sbjct: 666 TGLIIPIGEWVLRNTCTQARAWQEAGFAQMRISVNISCRQFTHDNLPDTIRGILRET-GL 724 Query: 509 QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKL 568 Q + +E+ E+ + + R ++ + +G+ +A++ G S S +K L ++LK+ Sbjct: 725 QPSCLELEITESVIMLNPERAISLLNELKEMGISIAIDDFGTGYSSLSLLKRLPADILKI 784 Query: 569 HPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFA 628 V I ++ LV +++ + A GV + + L +R QG +F+ Sbjct: 785 DKSFVSGIPGNKSDETLVATIINLGHNMGLGLVAEGVERQEQLHFLEERNCQEVQGYYFS 844 Query: 629 SSQPLDTNVKKY 640 P +T Sbjct: 845 KPLPAETLQPLL 856 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 721 bits (1863), Expect = 0.0, Method: Composition-based stats. Identities = 86/466 (18%), Positives = 184/466 (39%), Gaps = 18/466 (3%) Query: 184 VLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLA 243 + + + +I + + IR A D T L NR F +LA Sbjct: 349 YITLSPIEENGEIVEMVGSMIDITE----RKKAEETIRYMAHYDSLTNLPNRTLFHEKLA 404 Query: 244 TLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLAR 303 + ++ VM I L F ++DT GHS + + N L + + ++R Sbjct: 405 EAMLKAKQKDEKIGVMFIDLDRFKNINDTLGHSIGDVLLQAVANRLICCLRKE--DSVSR 462 Query: 304 YHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQ 362 +FA L T +EA IA ++I ++ ++ IGI + G D E Sbjct: 463 LGGDEFAIFLTGVTHREAGEIAQRIITSMSESITLDHIEIFITPSIGISMYPDDGDDIEA 522 Query: 363 VMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR 422 +++HA++A A QG N++ + + L + ++ + + L L+ +P + Sbjct: 523 LLKHADAAMYLAKEQGKNNYQFFSEELHQVLAKKLQLERELRKALDEKQFTLHYQPKIHL 582 Query: 423 -EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN- 479 GQ+ E + R + + +++P+ + GL + + W E Sbjct: 583 QTGQIIGMEALIRWDHPDLGLIPPIQFIPIAEETGLIVPLGEWVMRTACQQTKAWQEAGF 642 Query: 480 ----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRL 535 +A+ +++ ++ + L + + + +E+ E+ ++ ++ Sbjct: 643 TQLAVAVNISLRQFMQNNLIEMITSILEET-GLAPQYLELEITESMAL-NVDYTIRILNR 700 Query: 536 VNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSG 595 + ALGV ++++ G S S++ + ++ LK+ +RN+ +NQ ++++++ Sbjct: 701 LKALGVSISIDDFGTGYSSLSYLSQFPIDRLKIDQSFLRNL--NPQNQAIIKTIIHMAHN 758 Query: 596 TSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 V A GV + L ++ QG F++ P Sbjct: 759 MKIAVIAEGVETHEHVDFLKEQLCNEVQGYFYSKPLPTKEIDSFLQ 804 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 721 bits (1861), Expect = 0.0, Method: Composition-based stats. Identities = 105/638 (16%), Positives = 222/638 (34%), Gaps = 34/638 (5%) Query: 31 YNAIQYKFSHRVQAVATAIDTHLVSNDFSVLRPQITELMMSADIVRVDLLHGDKQVYTLA 90 ++++ + +A L ++ V L +A + + L + V ++ Sbjct: 195 RVLLEWRAAALGEATFQTEARFLRADGSIV----WARLNAAAMLDGLHLRGHVQTVEDIS 250 Query: 91 RNGSYRPVGSSDLFR-ELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIV 149 + R ++++ I ++ L N +MT P AIG + Sbjct: 251 ERKITEDALFEEKERAQVTLNSIGDAVLTTNLKGDVTYLNLVAEMMTGWPREAAIGQPLS 310 Query: 150 MLFLAVRWLQRQLAGQ-ELLETRATR------------ILNGERGSNVLGTIYEWPPRTS 196 +F + R++A L R R E Sbjct: 311 EVFRILNGTTREVAPNPAQLAIRENRTVGLAADSILIHRDGLEAAIEDSAAPIHNRDGQV 370 Query: 197 SALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHG 256 + + ++ +R + + A D TGL NR +L+ + + Sbjct: 371 AGAVIVFHDVSESRA----MALKMAHLAQHDFLTGLPNRALLTERLSRAIGQARRHNKRV 426 Query: 257 IVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR 316 ++ + L F ++D+ GH+ ++ + L + + R +F LL Sbjct: 427 GMLFLDLDYFKHINDSLGHAVGDQLLQQVAERLIVCIR--DTDTVCRQGGDEFVILLAEI 484 Query: 317 T-LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNA 374 ++A IA +L+ A + + IGI + G D + VM++A++A +A Sbjct: 485 EQARDAAPIAEKLLAAFAEPCLIAGNELHVSLSIGISIYPDDGMDADTVMKNADTAMYHA 544 Query: 375 GLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMC 433 G N++ + + + + + + L +G LY +P + G + E + Sbjct: 545 KANGRNNYQFFTTEMNTRAVRRLFIEGNLRRALRQGEFMLYYQPKIDLASGMMIGSEALI 604 Query: 434 RIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVE 487 R D V +++P+ + GL + +R W E L ++ ++ Sbjct: 605 RWQDPEHGLVYPKQFVPIAEESGLIVPIGSWVLREACRQVRAWQESGLVAVPVSVNISAV 664 Query: 488 SLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQ 547 F + L + + +EL E+ + V+ + +G+++A++ Sbjct: 665 EFRHKDFLEGVALILKETGML-PSYLELELTESILMHDAESSATVLEALKTMGMQLAIDD 723 Query: 548 AGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRS 607 G S S++K + LK+ V +I ++ +V +++ +V A GV + Sbjct: 724 FGTGYSSLSYLKRFPINTLKIDQSFVHDIAIDPDDASIVGAMIGMGKNLKQRVVAEGVET 783 Query: 608 RSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYS 645 + L GQG F P D + Sbjct: 784 EEQLAFLRTLHCDEGQGFLFGRPLPADEFARLLLNDRG 821 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 720 bits (1860), Expect = 0.0, Method: Composition-based stats. Identities = 94/504 (18%), Positives = 181/504 (35%), Gaps = 16/504 (3%) Query: 149 VMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQN 208 F W + G E R +G L + +I Sbjct: 904 DQAFYQSMWESIESLGHWQGEI-WNRRKDGSVYPEWLLISRVDGDGAPTHYIGTFIDIT- 961 Query: 209 AREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNM 268 QH + I+ A D TGL NR + ++ L + +M + L F Sbjct: 962 ---QHKEAEASIQRLAHFDALTGLPNRSLLEERVRHDLARAHRGREALALMFVDLDRFKN 1018 Query: 269 LSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQL 328 ++D+ GH + + L + ++R +F +LP A +A +L Sbjct: 1019 VNDSLGHRVGDALLIQVAERLRRAVR--DEDTVSRLGGDEFIVVLPSTDADGAAHVAAKL 1076 Query: 329 IKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDD 387 ++ + + + + GI + G+ E + A++A A G N++ + Sbjct: 1077 LEVMAPAYRIEQHELTCSLSAGIAMYPADGESFEALSMSADTAMYRAKQSGRNAYCFFTA 1136 Query: 388 SLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSA 445 + E+ N++ + + L G RL+ +P T + ++ E + R VS Sbjct: 1137 EMQERSARNLQIENDLRRALENGELRLHYQPQFTLADRRLVGAEALLRWQHPQLGMVSPV 1196 Query: 446 EYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRD 500 E++P+ + GL + + LR W +E L A+ ++ + + Sbjct: 1197 EFIPIAEECGLILPIGEWVLRAAVSQLRVWQQEGLPPMTVAVNLSAVQFRQASLTDVVSR 1256 Query: 501 TLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKE 560 L E + + +EL E+ + + + ALGVR++++ G S S++K Sbjct: 1257 IL-DAEGLAAQFLELELTESVAMDNPLAAIATMDKLRALGVRMSIDDFGTGYSSMSYLKR 1315 Query: 561 LNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVT 620 V LK+ V ++ E++ +V + + Q A GV S ++ L +G Sbjct: 1316 FRVHKLKIDRSFVADLAADPEDEAIVTATISLARDLGLQTIAEGVESEAQLAFLRAKGCD 1375 Query: 621 GGQGDFFASSQPLDTNVKKYSQRY 644 QG F+ Sbjct: 1376 EAQGYLFSRPLAPAQFAAFVRAHA 1399 >UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K2_9PROT Length = 925 Score = 720 bits (1860), Expect = 0.0, Method: Composition-based stats. Identities = 93/506 (18%), Positives = 188/506 (37%), Gaps = 21/506 (4%) Query: 150 MLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNA 209 F W Q + G+ E R + + + ++ Sbjct: 418 AEFYHEMWRQIKQTGKWQGEIWDKRKNGEIYPKLLNIYAVKSKNGVVTHYVGSYTDLTER 477 Query: 210 REQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNML 269 + + I S A D TGL NR ++L L + G +G ++ I L F L Sbjct: 478 KM----AEEKIISLAFYDTLTGLPNRRLLLDRLNYALASGLRTGKNGALLFIDLDKFKTL 533 Query: 270 SDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAG--- 326 +DT GH + + + L + +AR +F +L ++ E+ A Sbjct: 534 NDTLGHDIGDLLLKQVAHRLKACVREI--DTVARIGGDEFVVMLEDLNIESVEAAAQTEV 591 Query: 327 ---QLIKAVDTLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSW 382 +++ A+ + + IGI + +GQ ++ ++ A+ A A G N Sbjct: 592 IGEKILAALRMPYQLLTNEFHSSVSIGISLFSNNGQSQDEPLKQADIAMYQAKKSGRNKL 651 Query: 383 AIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NEE 441 +D + + + + L+ +L+ + V Q E++ R N Sbjct: 652 RFFDQRMQDTISSRANLEAELRKALANEQLQLHYQIQVDSAHQTIGAEVLLRWIHPVNGI 711 Query: 442 VSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN------LAIQVTVESLIRPRFQ 495 +S A+++P+ + GL + L+ W + LAI V+ + F Sbjct: 712 ISPAQFVPVAEETGLILPIGLWVLETACAQLKKWQDNPATAQLILAINVSARQFHQNGFA 771 Query: 496 RWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVST 555 +R + + + +EL E + ++ +R + GV+ +++ G S Sbjct: 772 TEVRSVI-ERHDINPALLKLELTEGMLLNNLDDTIATMRSLQEFGVQFSLDDFGTGYSSL 830 Query: 556 SWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLI 615 ++K L + LK+ VR++ +Q +V++++ + V A GV + + Q L+ Sbjct: 831 QYLKRLPLAQLKIDQSFVRDLATGYNDQAIVRTIIAMAHSLNLNVIAEGVETEIQRQILL 890 Query: 616 QRGVTGGQGDFFASSQPLDTNVKKYS 641 + + QG F P++ S Sbjct: 891 KNQCSHFQGYLFGKPMPIEQFESLLS 916 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 719 bits (1856), Expect = 0.0, Method: Composition-based stats. Identities = 88/506 (17%), Positives = 188/506 (37%), Gaps = 30/506 (5%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F W G E R + + S +I Sbjct: 329 FYREMWETIHRTGAWQGEIWGRRKNGEVYPKWLSISAVVGTNGRVSHYIGTHNDITE--- 385 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + + I + A D TGL NR ++L + + +HG ++ I L +F L+D Sbjct: 386 -RKKAEERINALAFFDQLTGLPNRTLLLDRLKQTILSSGRSDSHGALLFIDLDNFKTLND 444 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT------LKEAESIA 325 T GH ++ + L+ + G +AR +F +L + ++ E++A Sbjct: 445 TLGHDVGDQLLKQVALRLTHCVR--DGDTVARLGGDEFVVVLANLNTNDKEAAQDTETVA 502 Query: 326 GQLIKAVDTLPNNKMLDRDDMIHIGICAW-----RSGQDTEQVMEHAESATRNAGLQGGN 380 +++ ++ + IG + + +M+ A+ + A G N Sbjct: 503 EKILATLNQTYQLGHVTHHSSASIGATLFKGPLIP----IDDLMKQADLSMYKAKAAGRN 558 Query: 381 SWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN- 439 + +D S+ + + + L+ L+ + + E ++ E++ R Sbjct: 559 AVRFFDPSMEIAVKVRAEMEDDLLRALAEKQFLLHYQAQMVGE-RLTGAEVLLRWQHPQR 617 Query: 440 EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP------EENLAIQVTVESLIRPR 493 VS AE++P+ + GL + L W LA+ V+ + Sbjct: 618 GMVSPAEFIPLAEETGLILPLGHWVLETACTQLAQWAGRPEVAHLTLAVNVSAHQFRQND 677 Query: 494 FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLV 553 F + L + + +R+ +EL E+ + +++ + + + GV +++ G Sbjct: 678 FVDQVLGVLEKT-GANPQRLKLELTESLLVENVEDIIDKMAALKHRGVGFSLDDFGTGYS 736 Query: 554 STSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQT 613 S S++K L ++ LK+ VR++ + + + +++V + V A GV + ++ Sbjct: 737 SLSYLKRLPLDHLKIDQSFVRDVLTDSNDASIARTIVALANSLGLGVIAEGVETEAQRDF 796 Query: 614 LIQRGVTGGQGDFFASSQPLDTNVKK 639 L G QG +F+ P++ Sbjct: 797 LASSGCHTYQGYYFSRPLPIEDFESF 822 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 719 bits (1856), Expect = 0.0, Method: Composition-based stats. Identities = 92/498 (18%), Positives = 177/498 (35%), Gaps = 17/498 (3%) Query: 157 WLQRQLAGQELLETRATRILNGERGSNVLGTIYEWP-PRTSSALDTLLREIQNAREQHSR 215 W G ET R ++ P R + + +I R Sbjct: 320 WAIVGEHGSWSGETTGVRCGGQRYPRTLMINGVRDPETREITHFIAIFSDIT----ARKR 375 Query: 216 LDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGH 275 + I+ A D TGL NR +L + + + G VM + L F ++D+ GH Sbjct: 376 AEADIQHLAYHDTLTGLANRFSLTARLQLSVAEARRNGQRLAVMFLDLDRFKHINDSLGH 435 Query: 276 SQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIKAVDT 334 +E + L + +AR +F +L + +A +L+ + Sbjct: 436 PVGDELLKQVARRLRDAVRET--DTVARLGGDEFVVVLQGIGGAHDVTHVAAKLLAQLSA 493 Query: 335 LPNNKMLDRDDMIHIGICAWRSG-QDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKG 393 + IGI + D +M +A++A +A G + Y D + Sbjct: 494 PYCVDTTELHTTASIGISLFPDDSADPAALMRNADTAMYHAKAAGRAKFQFYTDEMNRAA 553 Query: 394 RGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMV 451 + + ++RG L+ +P R G + E + R ++ ++P+ Sbjct: 554 TARLDLERKLRGAVARGEFELWYQPQFDSRHGHLTGLEALVRWRHPQDGLIAPLRFIPLA 613 Query: 452 LQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCE 506 + G+ E + R W + L ++ ++V L + TL Sbjct: 614 EETGVIVEIGTWVLREACRQARQWLDAGLPELRISVNLSVRQLREKCLVDTVWTTLA-AS 672 Query: 507 KSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELL 566 + + +E+ E+ V + +++ + LGVR+A++ G S S++K ++ L Sbjct: 673 GLRPGLLELEITESAVMDNPDEAVALLQALKNLGVRIAIDDFGTGHSSLSYLKLFPLDHL 732 Query: 567 KLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDF 626 K+ + +IE + ++V + V V A GV S + L + G QG Sbjct: 733 KIDRSFISDIEHDANDTMIVAAAVSLAHNLGLSVIAEGVESAVQVARLRELGCDELQGFH 792 Query: 627 FASSQPLDTNVKKYSQRY 644 F+ D + Sbjct: 793 FSRPVTADVVENLLRSVW 810 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 92/537 (17%), Positives = 198/537 (36%), Gaps = 24/537 (4%) Query: 120 RLVYQDPMGNYFHSLMTTAP-LTGAIGFIIVMLFLAVRWL-----QRQLAGQELLETRAT 173 L Y+ N S +T +++ + + R L Q+ L + + Sbjct: 974 GLDYKIRSVNPAFSAITGYSERQITDKYLVHLAYKQQRELFNSIEQQLLRHKHWVGEIWI 1033 Query: 174 RILNGERGSNVLGT-IYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGL 232 R + L +S + +I + + +R A+ D TGL Sbjct: 1034 RNKQRKAILVWLEINQVIDIKGETSHFVAVFTDITE----RKKAEQDLRFLASFDTLTGL 1089 Query: 233 NNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTF 292 NR F ++L + + ++ + L F ++D+ GH + L Sbjct: 1090 PNRTLFQDRLNHAITQAHRANNIVALLFLDLDRFKHINDSMGHHVGDLLLKAAAKRLQNA 1149 Query: 293 MMRYPGALLARYHRSDFAALLPHRTLKEAES-IAGQLIKAVDTLPNNKMLDRDDMIHIGI 351 + G +AR +F +L +A + I+ ++++A T + IGI Sbjct: 1150 VRE--GDTVARLGGDEFTIILEGVAKTKAATLISEKVLRAFQTPFLLEDKSLTISTSIGI 1207 Query: 352 CAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRG 410 + + + +++ A++A +A G N++ Y L E +V ++Q + R Sbjct: 1208 SLYPNDADNADSLIKFADTAMYHAKSLGRNNFQFYTHKLNEIATRHVLLEAGLKQAIHRN 1267 Query: 411 GPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRL 468 L +P + R+G + E + R +S E++P+ + G+ + I+ Sbjct: 1268 ELSLVYQPKFSLRDGSLTGLEALLRWHHTELGPISPVEFIPLAEETGIINQIGHWVINHA 1327 Query: 469 IPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVG 523 L W +A+ ++ L + L + + +EL E+ + Sbjct: 1328 CQQLAEWNALGFNNISMAVNLSARQLK-ADIISTIEVALA-VSGLPAQSLELELTESMIM 1385 Query: 524 QHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQ 583 + ++ + ALG+ +A++ G S S++K ++ LK+ VR+I ++ Sbjct: 1386 GNPQDSVSILSKLKALGLTIAIDDFGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPDDA 1445 Query: 584 LLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 + +++ V A GV ++++ L +G QG + + Sbjct: 1446 AITSAIIALAHSLELNVVAEGVETQAQLNFLGLQGCDEVQGFLLSKPLSAKDCLTLL 1502 >UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZE4_9PROT Length = 727 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 101/505 (20%), Positives = 189/505 (37%), Gaps = 21/505 (4%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F W G E R S + + ++ +E Sbjct: 229 FYREMWDDILANGHWEGEIWDRRKNGEVYPSWMNINPVRDISGNLLYYVGIFSDVTKRKE 288 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + I A D T L NR + +L + G HG V+ + L +F L+D Sbjct: 289 ----AEAQIHQLAFYDPLTELPNRRLLNERLQQAFSVGARSGHHGAVLFLDLDNFKTLND 344 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL------PHRTLKEAESIA 325 T GH ++ + L++ + G +AR +F +L P +A+ +A Sbjct: 345 TKGHDIGDQLLIEVAKRLNSCVRN--GDTVARLGGDEFVVVLESLSSVPDEAATQADLVA 402 Query: 326 GQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAI 384 ++ A+ IG+ +R Q E+V++ A++A A G N+ Sbjct: 403 EKIRYALSQPYQLANHVHRTTPSIGVVMFRGHQQSLEEVLKFADTAMYQAKTAGRNAIRF 462 Query: 385 YDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVS 443 YD + + Q++ R RLY + + + E++ R VS Sbjct: 463 YDPVMQASIEARAELEEELRQVVERNQLRLYYQVQMDSSNRPLGAEVLLRWQHPERGLVS 522 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP------EENLAIQVTVESLIRPRFQRW 497 A+++PM + G + L+ W + LA+ V+ + F Sbjct: 523 PAQFIPMAEETGHIVPIGLWVLQTACTQLKVWQSDPLTCDLTLAVNVSAKQFRSMDFVSQ 582 Query: 498 LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 ++ TL Q ++ + +EL E+ V +++ +R + LGV +++ G S + Sbjct: 583 VQRTLAQ-SGAKPSLLKLELTESLVLENVEDTIAKMRELKLLGVSFSMDDFGTGYSSLQY 641 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 +K L ++ +K+ VR+I + + +VQ+++ V A GV + ++ + L R Sbjct: 642 LKRLPLDQIKIDQSFVRDIASDSNDAAIVQTIIAMSEVLGLNVIAEGVETEAQREFLDLR 701 Query: 618 GVTGGQGDFFASSQPLDTNVKKYSQ 642 G QG F PL + Sbjct: 702 GCHAFQGYLFGRPAPLAEFEAILRK 726 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 717 bits (1852), Expect = 0.0, Method: Composition-based stats. Identities = 88/499 (17%), Positives = 187/499 (37%), Gaps = 15/499 (3%) Query: 149 VMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQN 208 F W G E + G + R I Sbjct: 424 DAEFYRAMWDDINQHGYWQGEI----WDKHKSGRIYPKWMSITAVRDEHGKVVNYISIAR 479 Query: 209 AREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNM 268 + + + I A DV TGL NR ++L ++ + ++ + L F Sbjct: 480 DTTEQTEAEKNIHFLAYYDVLTGLPNRTLLRDRLGQMIAVAHRDKHQFSLIFLDLDRFKY 539 Query: 269 LSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQL 328 ++D+ GHS + ++ + + G +AR +F LL A +A +L Sbjct: 540 INDSMGHSVGDRLLQSVALRIQDCVRE--GDTVARLGGDEFIVLLREAGESAASVVAQKL 597 Query: 329 IKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDD 387 + A+ T + IGI + QD + ++++A+ A A +G N++ + Sbjct: 598 LIALATPYDLDGQVISTQASIGISIYPDQAQDADTLIKNADMAMYRAKEEGRNNFQFFVP 657 Query: 388 SLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG-NEEVSSA 445 + + + L RG L +P G + E + R +VS A Sbjct: 658 EMNFRVDLLFSMEKDLRLALERGELFLQYQPQADLASGTLSGVEALIRWDHPVKGQVSPA 717 Query: 446 EYMPMVLQFGLSEEYDRLQISRLIPLLRYW-----PEENLAIQVTVESLIRPRFQRWLRD 500 E++P+ + G + + W + +A+ +++ L +P ++ Sbjct: 718 EFIPVAEETGQIVAIGEWVLRTACSQMAEWRKTGMHDLTIAVNLSIRQLRQPDLAELIKS 777 Query: 501 TLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKE 560 L++ + + +E+ E + + + LGV+++++ G S +++K+ Sbjct: 778 VLLET-GLDARHLELEITEGIMMGDNQAAFRFLSEMQDLGVQLSIDDFGTGFSSLNYLKQ 836 Query: 561 LNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVT 620 + V LK+ +R+IE + +++S++ + +V A GV ++ + L RG Sbjct: 837 MPVNKLKIDQSFIRDIETDEGDAAIIRSIISLGHRLNLRVIAEGVETQEQLDFLRIRGCD 896 Query: 621 GGQGDFFASSQPLDTNVKK 639 QG F++ + ++ Sbjct: 897 EIQGYFYSRPLLAEDFMRF 915 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 717 bits (1852), Expect = 0.0, Method: Composition-based stats. Identities = 95/503 (18%), Positives = 194/503 (38%), Gaps = 16/503 (3%) Query: 154 AVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQH 213 + ++ LA + E +A + GS +Y P + T + Sbjct: 408 GLYEIRAALAEKR--EGKAVLRNYRKNGSLFWNDLYIAPVKDDEGKTTHFVAAMSDITPM 465 Query: 214 SRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTW 273 + +T + A+ DV TGL NR ++L + + G V+++ L F ++DT Sbjct: 466 KQYETTLHRLASHDVLTGLPNRALLQDRLENAIAYSARNGHAVWVVLVDLDRFKFVNDTM 525 Query: 274 GHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA---ESIAGQLIK 330 GH + +++ L + +AR +F +LP + + ++++ Sbjct: 526 GHQAGDVLLKIISDRLQASVRE--SDTVARLGGDEFVLVLPECGDGPSGYSSDVIQRIME 583 Query: 331 AVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSL 389 AV + + +GI + G D ++ HA+ A + G N++ Y ++ Sbjct: 584 AVVKPLTIQGSEFFLSCSMGIAVYPNDGADPTTLLAHADVAMYRSKELGRNNFQFYTPAM 643 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDG-NEEVSSAEY 447 ++ +R + + L+ +P V G + E + R V + Sbjct: 644 NDQALERLRIEGELRHAIELNELVLHYQPQVDLHTGAIVGLEALVRWNHPILGMVQPGSF 703 Query: 448 MPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTL 502 + + + GL + + W + +A+ ++ + ++DTL Sbjct: 704 ISLAEETGLIIPIGAWVLQTACRQAKAWQDMGFTQLRIAVNLSARQFTQASLLESIKDTL 763 Query: 503 MQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELN 562 + + + + IEL E+ V I R +R + +LGV+++V+ G S +++K Sbjct: 764 QET-GLEARFLEIELTESSVMADIERNILTLRDLKSLGVQLSVDDFGTGHSSLAYLKRFP 822 Query: 563 VELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGG 622 ++ LK+ VR+I ++ +V S++ V A GV + S+ L +G Sbjct: 823 IDTLKIDRSFVRDIAINQDDASIVSSIISLAHNLKLNVIAEGVETASQMDILRAQGCNEI 882 Query: 623 QGDFFASSQPLDTNVKKYSQRYS 645 QG +F P D S Sbjct: 883 QGYYFCKPLPSDQIETLLLNESS 905 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 717 bits (1851), Expect = 0.0, Method: Composition-based stats. Identities = 100/579 (17%), Positives = 217/579 (37%), Gaps = 17/579 (2%) Query: 75 VRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLRLVYQDPMG--NYFH 132 + +++A + S + R LS + + P + + + N Sbjct: 336 SVGRWREAGRNFFSVAARDISKRKQSEEKLRHLSQAVEQSPADVVITNAEGIIQYVNPRF 395 Query: 133 SLMTTAPLTGAIG----FIIVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTI 188 S +T IG + A + E R + + GS Sbjct: 396 SQVTGYASKEVIGKKPSILKSGRTPAALYDSLWETISAGKEWRGELMNRKKDGSLFWQHA 455 Query: 189 YEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLED 248 P R +S + T ++ + + A D TGL NR+ ++L + Sbjct: 456 IISPIRDNSGVITHYISVKEDISIRKEYEERLVRQANYDALTGLPNRILAMDRLKQAIAQ 515 Query: 249 QEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSD 308 ++ +M++ L DF ++DT GH+ + L + G +AR + Sbjct: 516 AQRYNRKVALMLLDLDDFKKVNDTLGHAAGDLLLKEAALRLVDCLRE--GDTVARLGGDE 573 Query: 309 FAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEH 366 F LLP AE +A +++ A + + + IGI + + D +M + Sbjct: 574 FVLLLPDLTDTSSAEVVAEKILAACNQPFDVGGHEAYIAGSIGIAIFPDDERDPILLMRN 633 Query: 367 AESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQ 425 A++A + +G + + + + ++R + + + R +++ +P V G+ Sbjct: 634 ADAAMYRSKREGKGVFRYFTPEMNARALEHMRMESQLRHAIERNEMKVHYQPLVDSGTGR 693 Query: 426 VHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP----EENL 480 + E + R + EVS +++P+ + GL + W E + Sbjct: 694 LVGAEALLRWSNPVLGEVSPEQFIPLAEETGLILSIGAWVLRTACRDAASWQRPDHEIFV 753 Query: 481 AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALG 540 A+ ++ + + +R +L + + +EL E+ + +H +I+ + +LG Sbjct: 754 AVNISGKQFQKRTLVEIVRSSLNE-SGLPPACLELELTESVLLEHTQETLSIIQELESLG 812 Query: 541 VRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQV 600 V A++ G S S+++ + LK+ ++++ + LV+S++ + S +V Sbjct: 813 VGFAIDDFGTGFSSISYLRRFPFDTLKIDRSFIKDLGDNEGDADLVKSIIAMANSMSLKV 872 Query: 601 YATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKK 639 GV + + + L G QG ++ P + Sbjct: 873 VGEGVETHGQREFLRLSGCHIAQGWLYSRPIPGKDFQEL 911 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 716 bits (1850), Expect = 0.0, Method: Composition-based stats. Identities = 90/498 (18%), Positives = 182/498 (36%), Gaps = 22/498 (4%) Query: 161 QLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLI 220 Q G+ E T+ + A+ + +I + + I Sbjct: 1005 QEQGEWAGEIVQFHRDGRRLDVEGRWTLIQGEQGQPDAILAIDTDIGQRKA----TEREI 1060 Query: 221 RSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEE 280 + A D TGL NR+ +++ L ++ G ++ I L +F L+DT GH Q + Sbjct: 1061 QRLAFYDSLTGLPNRMLLMDRMRHALATAQRRRQGGALLFIDLDNFKTLNDTLGHDQGDV 1120 Query: 281 QFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK------EAESIAGQLIKAVDT 334 + L+T + +AR +F ++ + A ++ +++ + T Sbjct: 1121 LLQQVAARLNTCVRSV--DTVARLGGDEFVVMIEGLSTHPGELAMSARTVGEKILAVLAT 1178 Query: 335 LPNNKMLDRDDMIHIGICAWRSGQD--TEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK 392 + IG+ + G+ ++++ A+ A A G N+ +D + Sbjct: 1179 PYVLQGYHYRSTPSIGVAPFGDGRTSTVGELLKQADLAMYQAKTAGRNTLRFFDPGMQAV 1238 Query: 393 GRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMV 451 + L+R L+ +P + R G V E + R VS E++P+ Sbjct: 1239 VTARAELENDLRTALAREQFMLHYQPQIDRRGSVTGVEALVRWPHPQRGMVSPGEFIPLA 1298 Query: 452 LQFGLSEEYDRLQISRLIPLLRYWPE------ENLAIQVTVESLIRPRFQRWLRDTLMQC 505 + GL R + L W ++A+ V+ F + + Sbjct: 1299 EETGLVLPLGRWVLHTACAQLARWQHVPGRGHLSMAVNVSSRQFHHEAFVEDVVRAITAT 1358 Query: 506 EKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVEL 565 + R+ +EL E+ + + + + + GV +++ G S S++K + ++ Sbjct: 1359 -GAPASRLKLELTESLFVEDMETTIATMAALRSHGVGFSLDDFGTGYSSLSYLKRMPLDQ 1417 Query: 566 LKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGD 625 LK+ VR++ + +V +++ V A GV + + L Q G QG Sbjct: 1418 LKIDQSFVRDLLADPNDAAIVDTIIALSRSLGLDVIAEGVETAEQRTRLEQAGCRAYQGY 1477 Query: 626 FFASSQPLDTNVKKYSQR 643 FF+ P Q+ Sbjct: 1478 FFSRPLPETALEDFLVQK 1495 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 716 bits (1850), Expect = 0.0, Method: Composition-based stats. Identities = 105/600 (17%), Positives = 224/600 (37%), Gaps = 14/600 (2%) Query: 53 LVSNDFSVLRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLI 112 LVS D EL+ + + + + + + + + +I Sbjct: 482 LVSVDPQAFDADEVELLAELADDIAFGIRTLRARVEQQQLAATLELRNRAIEESTNAIVI 541 Query: 113 KHPGMSLR--LVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLET 170 H + ++Y +P L F+I + + + A +E + Sbjct: 542 SHADRAADNPIIYVNPAFTVTTGYGADEVLGRNARFLIDNDWDQPAVERLREAVREGGDA 601 Query: 171 RATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKT 230 R T + G + I R + + I N + R + + A D T Sbjct: 602 RVTLRTYHKDGQLLWNEISLASIRDAQGEVSHFIAIFNDVTERVRYEAELEQQATHDALT 661 Query: 231 GLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLS 290 GL NR ++++ + + G VM++ L F +++D+ GH+ + LS Sbjct: 662 GLANRNLLNDRMQRAIIRAARDGHAVAVMLLDLDRFKLINDSLGHAAGDALLQETARRLS 721 Query: 291 TFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAG-QLIKAVDTLPNNKMLDRDDMIHI 349 + R G +AR +F ++ + ++A + ++++++ + I Sbjct: 722 ASVRR--GDTVARLGGDEFMVVMSDMSAEDAAAALAAKVLESLAEPMLLNGREIVATGSI 779 Query: 350 GICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLS 408 G+ + G+ +++HA+ A A G N + Y + E+ + + + L Sbjct: 780 GVSLYPRDGEAAATLLKHADVAMYRAKELGRNRFQFYAPEMNERILERLELENSLRRALE 839 Query: 409 RGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQIS 466 L+ +P V+ R+G+V E + R VS A+++P+ + GL + Sbjct: 840 NDELELHYQPKVSLRDGRVIGAEALIRWRHPQLGMVSPADFIPLAEETGLIVPIGEWVVD 899 Query: 467 RLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEAD 521 LR W + L A+ V+ + L L + ++ +E+ E+ Sbjct: 900 HACRQLRAWLDAGLPQISVAVNVSARQFQHEQLTHVLARALA-AHRLPPGQLHVEVTESA 958 Query: 522 VGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTE 581 V R +R + +GVR++++ G S +++K ++ +K+ V ++ E Sbjct: 959 VMCEPERTIFTLRELKNIGVRISLDDFGTGYCSLNYLKRFPIDSIKIDRCFVTDLATSAE 1018 Query: 582 NQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 + + +V + V A GV + ++ L + G QG F+ P + + Sbjct: 1019 DAAIALMIVSLAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGFLFSRPLPAAEFARLLA 1078 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 716 bits (1849), Expect = 0.0, Method: Composition-based stats. Identities = 96/505 (19%), Positives = 188/505 (37%), Gaps = 16/505 (3%) Query: 148 IVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQ 207 F W GQ E R + T S + +I Sbjct: 370 QDAAFYREMWATLGKRGQWQGEIWNRRRSGEIYPEWLSITAITEGDGGVSHYIGIFSDIT 429 Query: 208 NAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFN 267 + +E + IR A D TGL NRL ++L + + T V+ + L F Sbjct: 430 DRKES----EARIRHLAHHDALTGLPNRLLLQDRLGQAILKARRNSTQAAVLFLDLDRFK 485 Query: 268 MLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL-KEAESIAG 326 ++DT GH + +T + +AR +F +LP ++A +IA Sbjct: 486 TINDTLGHEIGDGLLRQVTQRCLGAVRET--DTVARQGGDEFVIVLPDLEHGQDAGTIAR 543 Query: 327 QLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIY 385 +++ A+ + IGI + G D ++ +A++A A G N + Y Sbjct: 544 KILAALTEPCRLGPHELTVTGSIGIALYPGDGADPSMLLRNADAAMYRAKADGRNGFQFY 603 Query: 386 DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVS 443 + G + + L R RLY +P V +G + E + R + ++ Sbjct: 604 AADMNTHSLGELLLEHQLRGALDRNELRLYFQPKVNAADGCIEGCEALLRWQHPDLGLLA 663 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLA-----IQVTVESLIRPRFQRWL 498 ++P + GL + LR W + LA + ++ + + Sbjct: 664 PGRFVPAAEESGLIVPIGEWVLREACRQLRAWIDAGLAPVPVAVNLSGQQFAHQDIVALV 723 Query: 499 RDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWI 558 R+ L + + + +EL E + + + R + + A+GV +A++ G S +++ Sbjct: 724 REALAE-HRLPAPMLELELTETMLMRDLERTIATLAELRAMGVTLAIDDFGTGYSSLAYL 782 Query: 559 KELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRG 618 ++ +V LK+ V +I + + + +++ V A GV + ++ L + G Sbjct: 783 RQFDVNALKIDRSFVHDIRPGSSDGKIATAVIALAHNLGLTVTAEGVETAAQQHFLARHG 842 Query: 619 VTGGQGDFFASSQPLDTNVKKYSQR 643 QG F +P + ++ + Sbjct: 843 CDQLQGFLFGQPEPAEAFAQRLADD 867 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 715 bits (1846), Expect = 0.0, Method: Composition-based stats. Identities = 99/515 (19%), Positives = 196/515 (38%), Gaps = 19/515 (3%) Query: 141 TGAIGFIIVMLFLAVRWLQRQL--AGQELLETRATRILNGERGSNVLGTIYEWPP-RTSS 197 G I + ++ + Q Q+ G E T+ + + P + Sbjct: 316 QTVFGLISLDEGISQKDFQEQISMRGSWSSELEVTQKNGSNFPAGARINRVDDPQSGLPA 375 Query: 198 ALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGI 257 +L +I + + +R A D TGL NRL +LA LL + + G Sbjct: 376 HYVWILADITE----RKQAEDRMRHIAQHDALTGLPNRLALLMRLAQLLPEARRHGWTVA 431 Query: 258 VMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT 317 VM I L F +++DT GH +E + LS + +AR +F +LP + Sbjct: 432 VMFIDLDRFKIINDTLGHQVGDEMLREVACRLSNLLRET--DFVARLGGDEFVIILPSIS 489 Query: 318 -LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAG 375 +A ++G++I A+ T + + IGI + G D + V+++A++A +A Sbjct: 490 SPADAAIVSGKIISALSTAIEAEGHELHTSPSIGISIFPDDGPDGDIVLKNADTAMYHAK 549 Query: 376 LQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCR 434 G N++ + + + + ++R L +P + E + R Sbjct: 550 AAGRNNYQFFAADMNRTAAERLNIERKLRHAIARNELSLVFQPQFRAEDTTPTGVEALLR 609 Query: 435 IFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVES 488 + +S A ++P+ + G+ E ++ + W L A+ V+ Sbjct: 610 WHHPTDGMISPARFIPVAEETGMIVEIGDWVLATACHEMARWINAGLKPLRIAVNVSARQ 669 Query: 489 LIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQA 548 L R F + + L + + +E+ E+ V ++ ++ + +GV +A++ Sbjct: 670 LRRRDFCETVANALT-TSGLPAELLELEITESSVMENPQEAIHILERLGRMGVTLAIDDF 728 Query: 549 GLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSR 608 G S +++K ++ LK+ V +IE ++ + + V A GV + Sbjct: 729 GTGYSSLAYLKLFPIDHLKIDRSFVADIEHDLNDRAIAFGTIALAHSLGLNVIAEGVETE 788 Query: 609 SEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 + + L G QG F+ R Sbjct: 789 DQHELLRANGCDEVQGFLFSKPLTGAAAFAFLHAR 823 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 714 bits (1845), Expect = 0.0, Method: Composition-based stats. Identities = 78/477 (16%), Positives = 189/477 (39%), Gaps = 16/477 (3%) Query: 177 NGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRL 236 G R L++I + + D ++ + D TGL NR Sbjct: 383 GGRRLVEGTVAPIRNDSDVIIGTVVALKDITEIK----KKDEILYNMEYYDPLTGLPNRS 438 Query: 237 FFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRY 296 F ++L L ++ ++++ L +F ++DT GHS + + + ++ Sbjct: 439 LFSDRLKMALAQSKRNNEMCALIILDLDNFKAINDTLGHSVGDMLLKQVAEKIKGYLREV 498 Query: 297 PGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR 355 +AR +F + P + +A A +++K + + +GI + Sbjct: 499 --DTVARIGGDEFIIIQPQIKDINDATRAADRILKKFQQPWILEGKEYYITASMGIGIYP 556 Query: 356 SG-QDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRL 414 +G +D + + ++A++A A G N++ +Y +S+ +K + + + + + L Sbjct: 557 NGGEDPQTIFKNADTALYRAKELGRNNYQLYTESMNQKVLQRLDIENSLRRAIEKEEFVL 616 Query: 415 YQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLL 472 + +P + + G++ E + R + + + E++P+ GL + Sbjct: 617 FYQPQIDIKTGKIVGFEALLRWYHPDYGLMPPMEFIPVAEDSGLIVVIGEWVLETACRQN 676 Query: 473 RYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHIS 527 + W E L ++ ++ R + + + +E+ E+ Q +S Sbjct: 677 KKWIECGLEPHLISVNLSARQFQRSNIVEVIDRI-RSSTGLAPELLELEITESTAMQDLS 735 Query: 528 RLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQ 587 V+ + G+RV+++ G S +++++L ++ LK+ V++I ++ + + + Sbjct: 736 FTIDVLNQLRKKGIRVSLDDFGTGYSSLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAK 795 Query: 588 SLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRY 644 +++ V A GV ++ + L + QG F+ P + K + Sbjct: 796 TVISLAHKLDLTVVAEGVETKEQLLFLKKEKCDKAQGYLFSKPLPAEEIEKMLRDKK 852 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 714 bits (1843), Expect = 0.0, Method: Composition-based stats. Identities = 96/564 (17%), Positives = 203/564 (35%), Gaps = 25/564 (4%) Query: 100 SSDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAV---- 155 S FR + + + N L AIG ++ L + Sbjct: 145 SESRFRRILQEIPSIAFKGYGVDGTVRYWNLASELFYGYSAGEAIGRNLLDLVIPEGMRA 204 Query: 156 ----RWLQRQLAGQE-LLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAR 210 R L+ G+ + +G R + + P + L L +I + Sbjct: 205 EEKRRMLRMAETGRADPPSEQCLLRRDGSRITVLSCHAVVRRPGEAPELYGLDIDISERK 264 Query: 211 EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLS 270 + + A D TGL NR F ++L L ++ G V+++ L F +++ Sbjct: 265 IN----EEQLEYLATHDELTGLANRALFHDRLEQSLHYAKRSGRIVAVLLLDLDRFKIIN 320 Query: 271 DTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLI 329 D+ GHS + + L + +AR +F LL T + +A +++ Sbjct: 321 DSLGHSFGDRLLSAVAQRLDRVVR--DTDTVARLGGDEFVLLLAEVTEPDDVGLLASRIL 378 Query: 330 KAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDS 388 + + + +GI + D ++ +A+ A A +GG ++ Y Sbjct: 379 HELAVPHRIEGREIVMSASLGISLYPKDSGDGSTLIRNADIAMYRAKQEGGGVFSFYAPE 438 Query: 389 LPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAE 446 + ++ + + + L RG LY +P V G++ E + R V+ A+ Sbjct: 439 MNQRAMETMEIESALRLALERGEFTLYYQPKVDLASGRISGCEALIRWLHPRRGVVAPAD 498 Query: 447 YMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDT 501 ++P+ + GL + +R W E + A+ ++ +R+ Sbjct: 499 FIPLAEETGLIVPIGTWVLKEACRQVRAWQAEGVPIANVAVNLSARQFRTGDLPGLVREV 558 Query: 502 LMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKEL 561 L + + +E+ E+ V +++ V+ + A+GVR++++ G S + + Sbjct: 559 LGET-GLDPHLLELEMTESMVMADHAQVVAVMEELTAIGVRLSLDDFGTGYSSFAHLSHF 617 Query: 562 NVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTG 621 + LK+ ++ I + + S++ + A GV + ++ L ++G Sbjct: 618 PINHLKIDRSFIKQIVTDPNSATIATSIIAMAHRMRLKAIAEGVETEAQLAYLRKQGCDE 677 Query: 622 GQGDFFASSQPLDTNVKKYSQRYS 645 QG + P + Sbjct: 678 IQGYLLSRPLPASEYAALVRRDAG 701 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 714 bits (1843), Expect = 0.0, Method: Composition-based stats. Identities = 101/505 (20%), Positives = 189/505 (37%), Gaps = 19/505 (3%) Query: 149 VMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSS-ALDTLLREIQ 207 LF W AG E R +G+ L + R + +I Sbjct: 621 DKLFYQAMWASLTKAGYWRGEV-WNRRRSGDIYPQWLTISTVFNDRNEPCNYVGVFTDIT 679 Query: 208 NAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFN 267 + + + + A D TGL NRL ++L +E + G + + L F Sbjct: 680 QIK----QSEARLAHLAHYDALTGLPNRLLVQSRLHHAIERTLRHGNQIAALYLDLDRFK 735 Query: 268 MLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAG 326 ++D+ GH +E L L + LAR +F +L E +A Sbjct: 736 NVNDSLGHPIGDELLVMLALRLKKRLREE--DTLARLGGDEFLVVLEDIKDSNEPAMVAQ 793 Query: 327 QLIKAVDTLPNN-KMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAI 384 LI + T + + IGI + ++++HA+ A A +G N++ Sbjct: 794 TLIDLLATPFSLPSGHEIFINTSIGISLFPTDANSVTELIQHADMAMYLAKQEGRNTYRY 853 Query: 385 YDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFDGNE-EV 442 + D+L + T + Q LS G L+ +P + GQV E + R ++ V Sbjct: 854 HTDALSIAANERLVLETQLRQALSAGEFVLHYQPLIDARKGQVMGVEALVRWQPPDKAMV 913 Query: 443 SSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE-----NLAIQVTVESLIRPRFQRW 497 S +++P+ + GL + R W + +A+ ++V Sbjct: 914 SPGKFIPIAEETGLIVPLGEWVLRTACAQGRAWMDADFPPLVMAVNLSVRQFQSENLVEL 973 Query: 498 LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 +R L + K + +EL E+ +H + +++ + +LGVR++++ G S ++ Sbjct: 974 IRQVLEET-KLPAACLELELTESMFMEHAEQSIEILKTLKSLGVRLSIDDFGTGYSSLTY 1032 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 +K ++ LK+ V + ++ + +++ V A GV S + L Q Sbjct: 1033 LKRFPIDKLKIDQSFVHGLAYDPNDREIAATIIAMARNLKLDVLAEGVESEQQLDILNQH 1092 Query: 618 GVTGGQGDFFASSQPLDTNVKKYSQ 642 G QG F P + + Sbjct: 1093 GCDYYQGYLFHRPVPAQELEVWFRE 1117 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 713 bits (1842), Expect = 0.0, Method: Composition-based stats. Identities = 108/658 (16%), Positives = 246/658 (37%), Gaps = 34/658 (5%) Query: 13 LLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFS----VLRPQITEL 68 +TG+ VT + A++ + +++ ++ + + + E Sbjct: 98 AVTGVASLVTAIMLWRLMPQALRIPSTRQLEETVERLEHEVEERELAERSLAAFNDTLET 157 Query: 69 MMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLRLVYQDPMG 128 ++ ++ ++ ++ R + + + + +++ I ++ + Sbjct: 158 LVQQRTAELEEINRLLKLEIDLRREAEQTLYAEKQRAVVTLQSIGDGVITTDKQSRVNYL 217 Query: 129 NYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQ---------ELLETRATRILNGE 179 N MT A G ++ +F V R+L E+ L G Sbjct: 218 NPVAERMTGWSNAEAQGKPLLEVFRIVNESSRKLVPNPVDVVLQHGEIYGLANHTALIGR 277 Query: 180 RGSNVLGTIYEWPPRTSSA----LDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNR 235 G+ P R + + ++ AR + + A D TGL NR Sbjct: 278 HGNEYAIEDSAAPIRDQDGNVLGVVLVFHDVSEARN----MANKMTYLAEHDYLTGLPNR 333 Query: 236 LFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMR 295 L +++L L + +M + L F ++D+ GH ++ + L + + Sbjct: 334 LLLNDRLNQALTIARRDQEFIALMFLDLDHFKNINDSLGHEVGDQLLKMVARRLESCLR- 392 Query: 296 YPGALLARYHRSDFAALLPHRTLK-EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAW 354 ++R +F LLP T +A +L+ A + IGI + Sbjct: 393 -ASDTISRQGGDEFMILLPELTNYFSPAEVAEKLLAAATVPYEIGSHEITVSASIGIAVF 451 Query: 355 RS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPR 413 G++ E + ++A++A +A G N++ + ++ E+ + + + + R Sbjct: 452 PDDGENGELLTKNADAAMYHAKSLGRNNYQFFTRAMNERVMEIAELESKLRRAVERNEFV 511 Query: 414 LYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPL 471 LY +P + R GQV E + R + V+ ++P+ GL + Sbjct: 512 LYYQPKIDIRTGQVVGAEALIRWQHPSWGLVAPDRFIPIAEDSGLIRPIGLWVMREACRQ 571 Query: 472 LRYWPEENLA-----IQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHI 526 + W LA + ++ L + F + + + L+ + + +E+ E+ Sbjct: 572 NQEWQAAGLARIPVAVNLSTVQLRQHNFLQEVSEILL-MSGLEPDYLELEVTESVAIHAE 630 Query: 527 SRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLV 586 + + + + ++GV++A++ G S S++K L + +K+ +R+IE ++ ++ Sbjct: 631 TEVINWLHKLRSMGVKLALDDFGTGYSSLSYLKRLPINNVKIDKSFIRDIETDPDDATII 690 Query: 587 QSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRY 644 +++ G V A GV + ++ + L + G QG + P D Q + Sbjct: 691 TAIIRMSHGLRLNVIAEGVENINQLEFLKKEGCDQMQGFIASRPVPADEF-ALLLQNW 747 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 90/499 (18%), Positives = 193/499 (38%), Gaps = 22/499 (4%) Query: 162 LAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIR 221 G E R+ +G+ + L +R+I + ++ I Sbjct: 644 RDGNAQFEWLHKRMDSGQSFPADVLLSSMKLDGRV-VLQATVRDITE----RKKSESEIV 698 Query: 222 SYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQ 281 A D TGL NR ++L L + HG ++ I L +F L+DT GH+ + Sbjct: 699 RLAFYDPLTGLPNRRLLMDRLQHALTSNLRNDKHGAILFIDLDNFKSLNDTKGHAVGDLL 758 Query: 282 FFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL------KEAESIAGQLIKAVDTL 335 + L + +AR +F LL + + + +A ++++A++ Sbjct: 759 LVEVAQRLKGCVREE--DTVARLGGDEFVVLLDNLSHGHDNAGAHTKRVAEKILQALNLS 816 Query: 336 PNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGR 394 + + IG+ + +++++ A+SA + G N+ YD+ Sbjct: 817 YMLQGYEYHSSPSIGVALFCADASSPDELLKRADSAMYQSKAAGRNTVRFYDERTQALLL 876 Query: 395 GNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NEEVSSAEYMPMVLQ 453 + L + LY + V + Q E++ R F +S A+++P+ + Sbjct: 877 ARAELEHALHHALEQQQLMLYYQVQVNADYQPVGAEVLLRWFHPVLGMISPAQFIPLAEE 936 Query: 454 FGLSEEYDRLQISRLIPLLRYWP------EENLAIQVTVESLIRPRFQRWLRDTLMQCEK 507 G+ + + L+ W + LA+ V++ F + + L+ Sbjct: 937 SGMIIPIGYWVLEQACDQLKRWASDVFKCDLVLAVNVSIRQFHEADFAQKV-QALVTDSG 995 Query: 508 SQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLK 567 R+ +E+ E+ + + + ++ + +G+ +++ G S S IK L ++ LK Sbjct: 996 ISPDRLKLEITESMLVHDVENIIATMQQLKKIGLNFSMDDFGTGYSSLSSIKRLPLDQLK 1055 Query: 568 LHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFF 627 + VR+I ++ +V++++ + A G+ + + + L +G T QG F Sbjct: 1056 IDQSFVRDIGHDEHDKAIVRTIIAMAQSMKLNIIAEGIETEQQRRLLALKGCTNYQGYLF 1115 Query: 628 ASSQPLDTNVKKYSQRYSV 646 + PL S+ + Sbjct: 1116 SKPVPLSDFEGLLSRAGGL 1134 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 99/511 (19%), Positives = 187/511 (36%), Gaps = 25/511 (4%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLG------TIYEWPPRTSSALDTLLRE 205 F W + G E R NGE L S + + Sbjct: 287 FYQAMWATLKATGHWSGEV-WNRRKNGEIYPQWLTINAVCIDSSCCDESNSCNYVGVFTD 345 Query: 206 IQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPD 265 I + + + + A D TGL NRL +QL +E ++ G V+ I L Sbjct: 346 ISQIK----QSEAQLAQLAHYDPLTGLPNRLLAQSQLHQAIERAQRHGRLVGVLYIDLDR 401 Query: 266 FNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESI 324 F ++D+ GH +E L + + LAR +F +L R L + + Sbjct: 402 FKNVNDSLGHPVGDELLIKLAERMKKRVREE--DTLARLGGDEFLLVLEDVRDLGDPAFV 459 Query: 325 AGQLIKAVDTLPNN-KMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSW 382 A LI + + + IGI + + ++++H++ A A +G N++ Sbjct: 460 AQSLINLLTSPFVLPSGHEIFINASIGISLFPEDASNATELIQHSDMAMYQAKKEGRNTY 519 Query: 383 AIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNE- 440 + ++L + + LS L+ +P V R G V E + R + Sbjct: 520 RYHTEALSVAANERLIMENRLRYALSAEELILHYQPLVDARTGYVVGVEALVRWQPPGKA 579 Query: 441 EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQ 495 V +++P+ + GL + R W + L A+ ++V Sbjct: 580 MVPPGKFIPIAEETGLIVPLGEWVLRTACKQARAWIDAGLSPLVMAVNLSVRQFQSENLV 639 Query: 496 RWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVST 555 ++ L + + + +EL E+ +H+ + + + LGV +A++ G S Sbjct: 640 GMVQRILEETQ-LPADYLELELTESMFMEHVEQSIETLNKLKTLGVHLAIDDFGTGYSSL 698 Query: 556 SWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLI 615 ++K ++ LK+ VR++ ++ + +++ G V A G+ S + L Sbjct: 699 IYLKRFPIDKLKIDQRFVRDLADDHNDREIAATIIAMARGLKLGVLAEGIESEEQLAFLR 758 Query: 616 QRGVTGGQGDFFASSQPLDTNVKKYSQRYSV 646 Q+ QG F P + +SV Sbjct: 759 QQDCDYYQGYLFHRPVPAIELEAWLRE-HSV 788 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 94/524 (17%), Positives = 207/524 (39%), Gaps = 23/524 (4%) Query: 132 HSLMTTAPLTGAIGFI-IVMLFLAVRWL----QRQLAGQELLETRATRILNGERGSNVLG 186 HSL +A ++ I F A RW + + +++ ETR R V Sbjct: 243 HSLGYSASELESLHLWDIDPDFPAERWAEQWERMKSDPKQVFETRHQRKDGRIFPVEVSA 302 Query: 187 TIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLL 246 + + + +R+I + + + + D TGL NR+ D+++ + Sbjct: 303 SQCLFNNEENH--VAFVRDIT----IRKKYEKELEHQSNHDALTGLANRVLLDDRIQQAI 356 Query: 247 EDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHR 306 E+ + V ++ L F +++D+ GHSQ + + LS + PG L+R Sbjct: 357 VHAERAQRNTAVFLLDLDRFKVINDSLGHSQGDAVLLAVAERLSACI--SPGDTLSRLGG 414 Query: 307 SDFAALLPHRT-LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVM 364 +FA ++ H +A +A +++ A + + IG + G+ +E ++ Sbjct: 415 DEFAIVMTHVNHPADARIMAQKILNAFEQPFPLGNRELRITTSIGASLYPRDGEQSEDLL 474 Query: 365 EHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-RE 423 HA++A A QGGN + + + + + + Q L G L+ +P V Sbjct: 475 RHADAAMYQAKKQGGNGFQFCSEEMDTRAHKALELEGDLRQALQLGSFVLHYQPKVKIAS 534 Query: 424 GQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-- 480 G++ E + R + +S +++P+ + GL + + W + L Sbjct: 535 GKIDGCEALVRWNHPDKGMISPDDFIPLAEETGLIIALGEWVLREACRQFKAWQAQGLPP 594 Query: 481 ---AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVN 537 A+ ++ ++ F ++ L + + + +EL E+ V + R+ ++ + Sbjct: 595 IKIAVNLSARQFLQSDFVESIQTILHEFD-IDPHWLDLELTESMVMEDPDRIAKLLAELK 653 Query: 538 ALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTS 597 +G ++++ G S ++++ ++ LK+ + ++ + S++ Sbjct: 654 QIGFALSLDDFGTGYSSLNYLRRFPIDCLKIDRSFILDVASDATAASVANSVIGIAHSLG 713 Query: 598 TQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 A GV +R ++ L QG F+ P + + Sbjct: 714 IHAIAEGVETREQYAFLAMCECDSIQGYLFSKPLPANDLAALLA 757 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 712 bits (1840), Expect = 0.0, Method: Composition-based stats. Identities = 92/494 (18%), Positives = 180/494 (36%), Gaps = 23/494 (4%) Query: 163 AGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRS 222 +G+ E R T+ A+ + +I + + I Sbjct: 562 SGEWRGELAQRRRDQSMLNVEAHWTLVRNDDGEPQAIFAINTDITQRKS----AENEILH 617 Query: 223 YAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQF 282 A D TGL NR ++L L + G ++ I L +F +L+DT GH + Sbjct: 618 LALYDSLTGLPNRRLLLDRLGHALAVSARNQRMGALLFIDLDNFKLLNDTLGHDMGDLLL 677 Query: 283 FTLTNLLSTFMMRYPGALLARYHRSDFAALL-------PHRTLKEAESIAGQLIKAVDTL 335 + LS+ + +AR +F +L L + +I ++ A Sbjct: 678 RQVAPRLSSCVRE--SDTVARLGGDEFVVILMGDFGEDHDEALTQISTICERIRSAFIQP 735 Query: 336 PNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGR 394 N IGI + Q T ++++ A+ A A G N+ +D + Sbjct: 736 FNLDPYIHHITPSIGIALFNDQSQTTNELLKRADLAMYQAKASGRNAMRFFDPDMQAAMN 795 Query: 395 GNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQ 453 + + + R L+ + V G + E + R + +E++P + Sbjct: 796 ARAILESELYKSWERNEFILHYQLQVDSRG-IIGAEALVRWQHPRRGLLPPSEFIPQAEE 854 Query: 454 FGLSEEYDRLQISRLIPLLRYWP------EENLAIQVTVESLIRPRFQRWLRDTLMQCEK 507 GL + L W + NL++ V+ +P F + L + Sbjct: 855 TGLILPLGEWVLETACNQLASWALQPETVQLNLSVNVSSLQFCQPDFVEQVISILDRT-G 913 Query: 508 SQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLK 567 + +R+ +EL E+ + + + + A GV A++ G+ S ++K L ++ +K Sbjct: 914 ANPQRLKLELTESILVHDMDDTIAKMMTLKARGVGFALDDFGIGYSSLYYLKRLPLDWVK 973 Query: 568 LHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFF 627 + VR++ + +V++++ V A GV + ++ L G T QG F Sbjct: 974 IDRSFVRDVLTDNNDATIVRTILLLAKSMGLAVIAEGVETGAQKDFLASHGCTAYQGYLF 1033 Query: 628 ASSQPLDTNVKKYS 641 + PL+ + Sbjct: 1034 SRPLPLEQFERFVQ 1047 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 712 bits (1840), Expect = 0.0, Method: Composition-based stats. Identities = 113/638 (17%), Positives = 222/638 (34%), Gaps = 28/638 (4%) Query: 17 LTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFSVLRPQITELMMSADIVR 76 L + LL + ++ + R Q V + L+ ++ + Sbjct: 265 LVMTRRLLSGEIPSFSIEKRYRQRRGQLVWANLTAALMRDE-----------GGRPEYFI 313 Query: 77 VDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMT 136 + + + + V S L + + + L Sbjct: 314 LVVEDISARKQSEEAQQLALTVFDSMLEGVIITDHHRRILAVNAAFGEITRYPVEALLGR 373 Query: 137 TAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTS 196 T PL F W Q +G+ E + + + Sbjct: 374 TPPLWRT--AHQDAAFYRRIWRQLLASGRWEGELWHRKRDGTPFPLWLSISCVRDEQGRP 431 Query: 197 SALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHG 256 + +I ++ +L+ A D TGL NR +L LE + Sbjct: 432 RQYVFVFNDISQLKDSQEQLE----RLAHYDPLTGLPNRHLALARLEHALERARRHAFPL 487 Query: 257 IVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR 316 VM I L F ++D+ GH +E + L + + LAR +F ++ Sbjct: 488 AVMFIDLDRFKTINDSLGHQAGDELLVAIAQRLHQRLRQE--DTLARLGGDEFLVVIEEA 545 Query: 317 TLKEAESIAGQLIKAVDTLPNN-KMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNA 374 +++ SIA L+K VD + IGI + G+ +++ +A++A A Sbjct: 546 PVQQVASIAHALLKVVDQPFGFSGGGEAYVGASIGISLYPGDGRSASELIRNADAAMYLA 605 Query: 375 GLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMC 433 QG N++ Y +SL + T + + L L+ +P V G+V E++ Sbjct: 606 KAQGSNAYRFYTESLTRAANERLSMETSLRRALRCEEFVLHYQPLVELASGRVLGAEVLV 665 Query: 434 RIFDGNE-EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL----AIQVTVES 488 R E V + ++P+ + GL + + W + L A+ ++ Sbjct: 666 RWQPPGEALVPPSRFIPLAEETGLIVPLGDWVLHEACRQGKAWLDAGLPLLLAVNLSPRQ 725 Query: 489 LIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQA 548 +R +R L Q ++ +EL E + + + + + LGV +A++ Sbjct: 726 FLRHDLVGQVRKAL-QGSGLPPAQLELELTEGALMEQAEQAVKTLHALKRLGVSLAIDDF 784 Query: 549 GLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSR 608 G S +++K ++ LK+ VR++ + + + +V +++ + A GV + Sbjct: 785 GTGYSSLAYLKRFPLDKLKIDRSFVRDLPRDSSDAEIVTTIIAMVRNLKLEALAEGVETP 844 Query: 609 SEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV 646 + L Q G GQG F+ P + + V Sbjct: 845 QQLAFLRQLGCDSGQGYLFSPPLPAEAFERWLRDGRGV 882 >UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG8_METSD Length = 950 Score = 712 bits (1840), Expect = 0.0, Method: Composition-based stats. Identities = 91/529 (17%), Positives = 196/529 (37%), Gaps = 30/529 (5%) Query: 139 PLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRIL---------NGERGSNVLGTIY 189 P A + F W R + E + + ++G Sbjct: 426 PPEFAPTLDSALAFYPEEWRSRIVQALEECLQKGDSFDEELPILTCKDKLLWIRIIGQAV 485 Query: 190 EWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQ 249 + ++ +++I ++ I+ A D T L NR F ++L L Sbjct: 486 YDLHGNITRIEGAIQDIS----AQKVAESRIQHLAFYDSLTSLPNRQLFIDRLEHTLAYS 541 Query: 250 EKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDF 309 + G V+ I L +F L+DT GH + + ++ + +AR+ +F Sbjct: 542 ARTSKSGAVLFIDLDNFKTLNDTMGHDLGDMLLQQVAMRIAGCLRE--SDTVARFGGDEF 599 Query: 310 AALLPHRT------LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQ 362 LL + +A ++ +++ + + IG+ + ++ Sbjct: 600 VVLLHELSGNHQEAAAQARLVSEKILISFAHPFQFSGYEHHTSASIGVTLFDQQPTTVDE 659 Query: 363 VMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR 422 +++ A+ A + G N +D + V + L L +P V Sbjct: 660 ILKRADLAMYQSKAAGRNVIRFFDPEMQALIADRVEMEEDLRNGLRNDEFFLCYQPQVDN 719 Query: 423 EGQVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE--- 478 +G++ E + R + + + ++P+ GL + L W ++ Sbjct: 720 QGRLLGAEALLRWRNPKRGMIPPSTFIPLAEDSGLIVSVGNWVMYAACKQLVLWAQQPLT 779 Query: 479 ---NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRL 535 LA+ V+ + L + F + + L + KR+ +EL E+ + +I + + Sbjct: 780 SSLTLAVNVSAKQLRQMDFVDQIVEVL-NVTGANPKRLKLELTESLMVNNIEDVIAKMTE 838 Query: 536 VNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSG 595 + +GV +++ G+ S S++K L ++ LK+ VR++ + ++ ++++ Sbjct: 839 LKNIGVGFSIDDFGIGYSSLSYLKLLPLDQLKIDQSFVRDVLTDPNDAVIARTIIALGKS 898 Query: 596 TSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRY 644 + QV A GV + S+ + L G QG F+ P D + Q + Sbjct: 899 LNLQVIAEGVETLSQREFLDNYGCDAYQGYLFSKPVPADEFERDVVQTF 947 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 712 bits (1839), Expect = 0.0, Method: Composition-based stats. Identities = 90/499 (18%), Positives = 196/499 (39%), Gaps = 13/499 (2%) Query: 154 AVRWLQ-RQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQ 212 R L+ ++L + + T ++ G + + S A + Sbjct: 204 PQRRLEFKRLMAKHGVVTNFESRVHRRNGEVIWISENARSVYNSDGTLLFFEGTVEAITE 263 Query: 213 HSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDT 272 + I+ A D TGL NR +++ + E+ G + + L F ++D+ Sbjct: 264 RKLHEAEIQFQATHDALTGLPNRTLLYDRMQQAVLHSERYGKLTAIAFLDLDQFKFINDS 323 Query: 273 WGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA-ESIAGQLIKA 331 GH +E L++ + +AR +F LL + +EA +++ Sbjct: 324 LGHQVGDELLKITAQRLTSCLRE--SDTVARQGGDEFVLLLTDQPNEEAITHTMQRVLHE 381 Query: 332 VDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLP 390 V L+ IG+ G+D E ++++A+SA A G N++ + + Sbjct: 382 VSQPWKANDLEFQITCSIGLTLCPDDGRDAETLLKNADSAMYKAKELGRNNFQYFSAEMN 441 Query: 391 EKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYM 448 + + Q ++ L+ +P V+ Q+ E + R + VS A ++ Sbjct: 442 SSVTDRLELLNRLRQAITNEDFVLHYQPKVSLASHQIIGAEALVRWNSAHSGMVSPASFI 501 Query: 449 PMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLM 503 P+ + GL + R W + +++ ++ L R + L Sbjct: 502 PLAEETGLIIPLGEWVLRTACRQNRAWQDAGYPPIPISVNLSPRQLARGDIVEVVERILT 561 Query: 504 QCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNV 563 + + + + +E+ E+ + + + ++ + +LGV+++++ G S S++K V Sbjct: 562 ET-GLEAQHLELEITESVMTTDVEKSFALLTQLRSLGVKISLDDFGTGYSSLSYLKRFPV 620 Query: 564 ELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQ 623 + LK+ VR+I ++ +V++++ + V A G+ + ++Q L+ G GQ Sbjct: 621 DTLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVLAEGIETEDQFQFLLANGCDEGQ 680 Query: 624 GDFFASSQPLDTNVKKYSQ 642 G + P V +Q Sbjct: 681 GYLMSKPVPNKNFVDLLTQ 699 >UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9D8_9BURK Length = 897 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 99/513 (19%), Positives = 193/513 (37%), Gaps = 21/513 (4%) Query: 139 PLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSA 198 L+ +G + + L + G E + + P Sbjct: 382 TLSELLGTQLPLNVQGHLDLLSTVDGIEGASAEVNGRHANGAIRPISVSASRIPHTEHDT 441 Query: 199 LDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIV 258 LR+I Q + + IR A D TGL NR +++ + + ++G HG + Sbjct: 442 FVVTLRDIT----QQRQDEEEIRRLAFYDPLTGLPNRRLLMDRVRQAMVNSARLGQHGAL 497 Query: 259 MMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT- 317 M + L F +L+DT GH +E + L + G +AR +F LL + Sbjct: 498 MFLDLDHFKLLNDTLGHDVGDELLQQVAYRLRNCVRE--GDSVARLGGDEFVVLLEGLSD 555 Query: 318 -----LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESAT 371 +AE +A +++ A+ + + + IGI + + + +++ A+ A Sbjct: 556 NRTDAANQAEVVAHKILDALALPYSLRGHGYNSTPSIGIVVFMEDHETMDDLLKKADVAM 615 Query: 372 RNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHREL 431 A G N+ +D + + I L R L+ + + +G+ E Sbjct: 616 YQAKAAGRNTARFFDPVMQAAVTTHAELAKEIRLGLQRHEFVLHYQVQIDSQGRCTGAEA 675 Query: 432 MCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE------NLAIQV 484 + R VS A ++P+ + G+ + L W LA+ V Sbjct: 676 LVRWNHRVRGLVSPAHFIPLAEETGMILPLGEWVMESACQQLVEWSRNPMTAHWTLAVNV 735 Query: 485 TVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVA 544 + L +P F +R+ L + + ++ +EL E+ + + + + + LGV + Sbjct: 736 SASQLAQPEFVASVREALQR-SGAPAGQLKLELTESMLVDDVEDIIVKMMAIKELGVSFS 794 Query: 545 VNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATG 604 ++ G S S++K L + LK+ VR++ + ++ +++V V A G Sbjct: 795 LDDFGTGYSSLSYLKRLPLSQLKIDQSFVRDVLTDPSDAVIARTVVALGHSLGLTVIAEG 854 Query: 605 VRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNV 637 V + + L QG +F P D + Sbjct: 855 VETAEQRDALAAMQCDAFQGYYFGRPAPADALI 887 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 89/500 (17%), Positives = 181/500 (36%), Gaps = 15/500 (3%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F W + G E R + + EI + R Sbjct: 248 FYREMWSAIERNGSWSGEISNRRKNGEIYNEWLTIHAVRNESGGIENCIAIYAEITDQRA 307 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 SR I+ A D T L NR +++ L + GT V+ + L F ++D Sbjct: 308 AASR----IQFLAHYDPLTLLPNRALLQDRMHQGLAHAAREGTRAAVLFLDLDRFKTIND 363 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIK 330 + GH + + L + +AR +F +LPH ++A +AG++I+ Sbjct: 364 SLGHLVGDHLLQEVAQRLKASVRE--DDTVARRGGDEFIVMLPHVDSAEQAAHVAGKIIE 421 Query: 331 AVDTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYDDSL 389 A++ + IGI + D + ++ +A+ A + G N + + + Sbjct: 422 AMEQTIPVNGYVLNVSFSIGISVFPDDAMDPDTLIRNADIAMYRSKASGRNQFQFFTADM 481 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYM 448 + + + + RG RL +P G + E + R V+ AE++ Sbjct: 482 NAHALERLALENDLHRAVERGEFRLMFQPQFEGSGSIIGAEALLRWQHPQRGLVTPAEFI 541 Query: 449 PMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLM 503 P+ + GL + R +R W + L ++ ++ + +R L Sbjct: 542 PVAEETGLIVPIGTWVLERACQQVRAWRDAGLKKITVSVNISALQFSQKNLLELIRRLLA 601 Query: 504 QCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNV 563 + + +EL E+ + ++ + +GVR+A++ G S S+++ + Sbjct: 602 -VSNIEPGTLELELTESVLMHDHVATSGLMSELKEMGVRMAIDDFGTGYSSLSYLRSFPI 660 Query: 564 ELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQ 623 LK+ VR++ + + +++ + +V A GV + + L + Q Sbjct: 661 SKLKIDQSFVRDLSDGGDAGAITGAIIGLAKNLNMRVIAEGVETAQQASFLQAQCCDEFQ 720 Query: 624 GDFFASSQPLDTNVKKYSQR 643 G FF+ + + Sbjct: 721 GHFFSQPVSPEKFAELLRAE 740 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 86/501 (17%), Positives = 181/501 (36%), Gaps = 15/501 (2%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F A W + G+ E R +L T + ++ +E Sbjct: 551 FYATMWEAIETEGRWQGEVWNRRKDGSLYPEWLLIQTMRDSRGTLTHYIGTFTDLTERKE 610 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + ++ A D TGL NR + + ++ +M + L +F ++D Sbjct: 611 ----TEERVQWLAHFDPLTGLPNRTLLHIRSNLAISLAQRRHEPLALMFLDLDNFKNVND 666 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKA 331 + GH +E + L + ++R +F +LP A +A +L+ Sbjct: 667 SLGHGVGDELLKQFSQRLVNAVREQ--DTISRLGGDEFVLVLPGTDTDGAAYLAERLLNI 724 Query: 332 VDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLP 390 N + + + + IGI + G D + + A++A A G N + + + Sbjct: 725 AARQYNIERHEINLTVSIGIAMYPTDGTDFDTLWRSADAAMYRAKQSGRNDYCFFTTEMQ 784 Query: 391 EKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYM 448 + ++ + + L R L +P ++ ++ E + R E++ Sbjct: 785 ARSARTLQIDNALRRALERNQFSLVYQPQLSLNTNRIVGFEALIRWTHPQFGNTPPDEFI 844 Query: 449 PMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLM 503 P+ G + + LR W + L ++ ++ PR + L Sbjct: 845 PIAESNGQIIPIGEWVLKTAVRQLRLWQDNGLKDVTISVNLSAVQFRHPRLPELVMAILE 904 Query: 504 QCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNV 563 + + + +EL E ++ VI + G+R++++ G S +++K NV Sbjct: 905 EA-GVSPECLQLELTEGVAMENPLAAITVIDELRKKGIRISIDDFGTGYSSLTYLKRFNV 963 Query: 564 ELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQ 623 LK+ V+++ TE+ +V +++ A GV ++ + + L RG T Q Sbjct: 964 YSLKIDRSFVQDLPNDTEDMAIVSAVISLADSLGMITVAEGVETKEQLEFLRSRGCTEIQ 1023 Query: 624 GDFFASSQPLDTNVKKYSQRY 644 G + + D + Sbjct: 1024 GYYLSRPLQADAVFSFIEDDH 1044 >UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=C6NZZ7_9PROT Length = 1152 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 96/487 (19%), Positives = 187/487 (38%), Gaps = 21/487 (4%) Query: 168 LETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQD 227 L+ R V G + L I + R + I+S A D Sbjct: 660 LQHRDITKSGTLLWEEVNGVPFFDEHGELMGLRGTGMNITD----RKRAEEEIKSLAFYD 715 Query: 228 VKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTN 287 T L NR ++L L + G G ++ I L +F L+DT GH + + Sbjct: 716 PLTHLPNRRLLVDRLQHALASSTRSGREGALLFIDLDNFKTLNDTLGHDIGDLLLQQVAL 775 Query: 288 LLSTFMMRYPGALLARYHRSDFAALLPHRTLK------EAESIAGQLIKAVDTLPNNKML 341 L++ + G +AR +F +L + + + ESI +++ ++ Sbjct: 776 RLASCVRE--GDTVARLGGDEFVVMLEELSEQTLEAAAQTESIGEKILLTLNQPYLLAAH 833 Query: 342 DRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWR 400 + + IG + + Q E++++ A+ A A G N+ +D + E Sbjct: 834 EYRNSPSIGATLFGNKPQSIEELLKQADIAMYQAKKAGRNTLRFFDPQMQETVIARALLE 893 Query: 401 TLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEE 459 + + L +LY + +T + E + R + ++P+ + GL Sbjct: 894 RELSKALENDQFQLYYQIQMTDLNEPFGAEALIRWIHPERGLIPPNHFIPLAEEVGLILP 953 Query: 460 YDRLQISRLIPLLRYW------PEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRI 513 + ++ W E LA+ V+ S + F ++ L + KR+ Sbjct: 954 IGLWVLDTACNQIKIWEKNASTRELVLAVNVSARSFFQDDFVTQIQTVLQR-HAINPKRL 1012 Query: 514 IIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLV 573 +E+ E+ + I + + + LGV+ A++ G S ++K L ++ LK+ V Sbjct: 1013 KLEITESMMLNSIEQTIEKMNALKKLGVQFAMDDFGTGYSSLQYLKRLPLDQLKIDQSFV 1072 Query: 574 RNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 R+I + ++ +V ++V + V A GV + + Q LI+ G + QG F P+ Sbjct: 1073 RDIATDSSDKAIVTTIVAMAHSLNLDVIAEGVETEQQRQLLIESGCSQYQGYLFGKPAPI 1132 Query: 634 DTNVKKY 640 + Sbjct: 1133 RQFEESL 1139 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 89/478 (18%), Positives = 184/478 (38%), Gaps = 11/478 (2%) Query: 170 TRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVK 229 I + S + + P + + T I+ + + + + A D Sbjct: 467 WHGEIINRRKDKSIYIESATITPVKQADGKITNYVAIKEDITEKKKAEAYTENLAYFDQL 526 Query: 230 TGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLL 289 TGL NR Q+ L + VM + L +F ++D+ GH+ ++ + + Sbjct: 527 TGLPNRRMLQAQVKYRLNMAQSNHQPLTVMFLDLDNFKNINDSLGHTVGDQVLIKIAKRI 586 Query: 290 STFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHI 349 + ++R +F L P+ A IA LI+ + + + I Sbjct: 587 KKAIREV--DTVSRLGGDEFIMLFPNTDANAAMHIATTLIQEISKASVVEHNELTITPSI 644 Query: 350 GICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLS 408 GI + G D + ++++AE+A N + + N++ + L Sbjct: 645 GIAIYPNDGNDFKTLLKNAETAMYRVKNDSRNGFHFVTPEMQLSASRNLQLENALRHALK 704 Query: 409 RGGPRLYQKPAVTRE-GQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQIS 466 R +LY +P ++ GQ+ E + R +S AE++P+ G E + Sbjct: 705 RNELQLYYQPQISTSNGQIIGAEALLRWHHPELGMISPAEFIPIAESSGQIIEIGEWVLR 764 Query: 467 RLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEAD 521 I + W ++ +A+ ++V + + D L + + + + +EL EA Sbjct: 765 TAIRQTKNWMDDGFTPMIIAVNLSVVQFRQKNLLTLITDILAEVQ-LPNEYLELELTEAV 823 Query: 522 VGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTE 581 + V+ + G+R++++ G S S++K+ V LK+ +R+I + Sbjct: 824 TMHDPESVINVMNTFHEQGIRMSIDDFGTGYSSLSYLKKFKVYKLKIDQSFIRDISNDPD 883 Query: 582 NQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKK 639 ++ +V ++++ S Q A GV + + L G QG +F+ P + Sbjct: 884 DRAIVSAIIDMASNLGLQTIAEGVETAEQLAFLRLHGCHEVQGYYFSKPLPSVEFEQF 941 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 711 bits (1835), Expect = 0.0, Method: Composition-based stats. Identities = 87/498 (17%), Positives = 186/498 (37%), Gaps = 16/498 (3%) Query: 157 WLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRL 216 W + G E R + ++ + +I Sbjct: 721 WASLEQTGYWQGEIIDRRKDGTLYPKWMAVSVVRDADGVLTHYVASFTDITE----RKLA 776 Query: 217 DTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHS 276 + I+ A D TGL+NR QL L + V+ + L F ++D+ GH+ Sbjct: 777 EAQIKHLAYHDPLTGLSNRFSLQTQLDQTLALARREQRTLAVVFLDLDRFKSINDSLGHA 836 Query: 277 QVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTL 335 ++ + L + ++AR +F +L A +A +L+ A+ Sbjct: 837 LGDQLLVEVARRLRDNVR--DSDIVARLGGDEFVVVLTEVGDAAGAARVADKLLGALVPR 894 Query: 336 PNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGR 394 IGI + G D + +M++A++A +A QG ++ + + + Sbjct: 895 YRIGGHALHTTASIGISLYPHDGDDADALMKNADTAMYHAKSQGRDNVQFFTPEMNQSVL 954 Query: 395 GNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFDG-NEEVSSAEYMPMVL 452 +++ + + G L+ +P + G+V E + R VS AE++P+ Sbjct: 955 KRLQFDHDLRVAVEAGQFELHYQPQINSTSGRVVKVEALVRWQHPREGLVSPAEFIPIAE 1014 Query: 453 QFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEK 507 + GL ++ LR W + + A+ ++ L P + TL Sbjct: 1015 ETGLILPLGEWVLNEACRQLRLWRDAGITDLTVAVNLSAHQLHSPALIPMVARTLGN-HG 1073 Query: 508 SQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLK 567 + + +E+ E+ + + ++ + LG+ ++++ G S S++K L ++ LK Sbjct: 1074 LEGADLCLEITESVAMRDTTASIAQLQALRDLGIHLSIDDFGTGYSSLSYLKLLPIDTLK 1133 Query: 568 LHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFF 627 L V IE + + + + +V A G+ + ++ + L QG F Sbjct: 1134 LDQSFVCEIEFNPSDVAICAATIALAHSLGLEVVAEGIETETQRRLLASHRCDFMQGYLF 1193 Query: 628 ASSQPLDTNVKKYSQRYS 645 ++ P + + ++ + Sbjct: 1194 SAPLPAERALAYIREQQA 1211 >UniRef50_Q47ES6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q47ES6_DECAR Length = 832 Score = 710 bits (1834), Expect = 0.0, Method: Composition-based stats. Identities = 97/502 (19%), Positives = 194/502 (38%), Gaps = 26/502 (5%) Query: 159 QRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDT 218 R++ E++E + G+ + + ++I + R + Sbjct: 323 NRRVYEGEVIEAEVEYQVGGQTRIFNNVVAPIKVDGQTIGIVGFNQDITD----RKRNEE 378 Query: 219 LIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQV 278 I A D T L NR ++L L + +HG +++I L +F L+DT GH Sbjct: 379 EIHRLAFYDSLTHLPNRRLMFDRLEHALIGSARRKSHGALLLIDLDNFKFLNDTHGHEVG 438 Query: 279 EEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK-----EAESIAGQLIKAVD 333 +E + L T + + G AR +F +L +AE IAG + ++ Sbjct: 439 DELLLEVAKRLKTCIRQ--GDTAARLGGDEFVVILEDIDGAGNGTIQAELIAGHIQAQLN 496 Query: 334 TLPNN------KMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYD 386 + +D IGI + ++++ A++A A G N+ +D Sbjct: 497 HPFSLVRPPERLSIDYRCASSIGIALFDDTMVTAKELLRRADTAMYQAKAAGRNTLRFFD 556 Query: 387 DSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NEEVSSA 445 + T + + + L + + + G+ E + R + A Sbjct: 557 PEMQAAVTHRAALETELRKAIDEQQFHLCFQVQMDQSGRPTGGEALLRWEHPTRGTIPPA 616 Query: 446 EYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE------NLAIQVTVESLIRPRFQRWLR 499 ++P+ + GL + ++ L W ++ LA+ V+ + RF LR Sbjct: 617 SFIPLAEETGLIVPIGQWVLATACRQLAAWSQQPETSGLTLAVNVSARQFRQARFTDQLR 676 Query: 500 DTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIK 559 D L+Q + R+ +EL E+ + + + + + LG+R +++ G S +++K Sbjct: 677 DLLLQT-GAPATRLKLELTESMMLEDTEAIIGRMAELKQLGIRFSLDDFGTGYSSLAYLK 735 Query: 560 ELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGV 619 L + LK+ VR++ + + +++V + +V A GV + ++W+ L G Sbjct: 736 RLPLNQLKIDQSFVRDVLTDPNDAAIAETIVALGNILGLEVIAEGVETDAQWRFLANVGC 795 Query: 620 TGGQGDFFASSQPLDTNVKKYS 641 QG F PL + Sbjct: 796 KNYQGYLFGRPLPLLEFEQFLQ 817 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 709 bits (1832), Expect = 0.0, Method: Composition-based stats. Identities = 97/508 (19%), Positives = 191/508 (37%), Gaps = 21/508 (4%) Query: 149 VMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQN 208 F A W + G E R + T + + +I Sbjct: 668 DKAFYAAMWESIRRTGSWQGEIWNRRKNGEAYPELLSITAVKENGGIVTHYVGTFMDITR 727 Query: 209 AREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNM 268 + + IR+ A D++TGL NR ++L L + G +++I L +F Sbjct: 728 RKA----AEDEIRNLAFFDLQTGLPNRRLLLDRLQQALAASARHRRQGALLLIDLDNFKT 783 Query: 269 LSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK------EAE 322 L+DT GH + + + L++ + + G +AR +F +L + + +AE Sbjct: 784 LNDTLGHDKGDLLLQQVAQRLASCV--HEGGTVARLGGDEFVVMLENLSEHLEAAATQAE 841 Query: 323 SIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNS 381 ++A +++ ++ + + IGI + Q TE +++ A+ A A G N+ Sbjct: 842 TLAKRILASLKQTYSLDGYEYQSTASIGITLFSEQQETTEDLLKRADLAMYQAKAVGRNT 901 Query: 382 WAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-E 440 +D + + + ++ LY + V +G + E + R Sbjct: 902 LRFFDPEMQAVVTSRAALEAGLRRAVTSDEFLLYYQAQVDGQGHLTGCEALLRWQHPERG 961 Query: 441 EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP------EENLAIQVTVESLIRPRF 494 V+ E++ + GL R + L W +A+ V+V + F Sbjct: 962 LVAPGEFIALAEDTGLILPLGRWVLDAACTQLAQWATRPEMAHLTVAVNVSVRQFHQADF 1021 Query: 495 QRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVS 554 + L + +R+ +EL E+ + + + + ++ GV +++ G S Sbjct: 1022 VNQVLTVLDST-GTNPQRLKLELTESLLIGDVEDVIAKMSILKEKGVGFSLDDFGTGYSS 1080 Query: 555 TSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTL 614 S++K L ++ LK+ G VRNI + + + ++ V A GV ++ L Sbjct: 1081 LSYLKRLPLDQLKIDQGFVRNILIDPNDAAIARMVIALGDSLGLAVIAEGVEIEAQRDFL 1140 Query: 615 IQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 + G QG F PLD + Sbjct: 1141 ARLGCHACQGYLFCRPLPLDQFEAFVRR 1168 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 709 bits (1831), Expect = 0.0, Method: Composition-based stats. Identities = 84/536 (15%), Positives = 204/536 (38%), Gaps = 17/536 (3%) Query: 117 MSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRIL 176 ++L +D N SL+ +I + + + + A Sbjct: 344 LALDQSTEDTCKNILKSLLPVFEFQEMAVAMIKLEDK-QYFTPKYQDNLSNCISSAIISH 402 Query: 177 NGERGSNVLGTIYEWPPR---TSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLN 233 + G + I +P + +DT+ ++ + + I A D TGL Sbjct: 403 GQQCGLLQVAYIRNFPSTLTYQQNLVDTIAHDL-GRWYEGKEAEKRIIEMATHDALTGLP 461 Query: 234 NRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFM 293 NR +++ +L ++ V+ I L F ++D+ GH + + + L + + Sbjct: 462 NRYLLRDRIEQVLVHDTRLQRQMAVLFIDLDHFKTINDSLGHEIGDLLLKAVADRLKSCV 521 Query: 294 MRYPGALLARYHRSDFAALLPHRTLK-EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGIC 352 +AR +F +L +A +A +++ + + + IGI Sbjct: 522 RNE--DTVARQGGDEFIVVLNSIAESLDAAKVAQKILDSFALPFHIHKNELHIDGSIGIA 579 Query: 353 AWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGG 411 + G + E ++++++ A +A G N++ + D L + + L R Sbjct: 580 VFPDDGVNAETLLKNSDVAMYHAKKNGRNNYQFFTDELNKSAYERHILGLDLRYALERNE 639 Query: 412 PRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLI 469 LY +P + ++ E + R + ++ +++ + + GL I + Sbjct: 640 LLLYYQPVMDMPSHNLYGVEALLRWRHPEQKLITPDKFINLAEETGLIIPIGEWVIRTVC 699 Query: 470 PLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQ 524 ++ W E+ +AI ++ + + L + + K I +E+ E+ + Sbjct: 700 LQIKAWQEQGFYVPRVAINLSARQFRDKDLIKNISRILSET-GVKAKHIALEITESMLID 758 Query: 525 HISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQL 584 +I ++ + ++A+G+ ++++ G S S++K+ + LK+ VR++ ++ Sbjct: 759 NIEKVVETLNRLDAMGLHISIDDFGTGYSSLSYLKQFPIHTLKIDRSFVRDLVTDKNDRT 818 Query: 585 LVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 +V +++ +V A G+ + L+ + QG +F+ + Sbjct: 819 IVAAIIAMAHSLEMEVIAEGIEIEEQLDFLVTQKCNHYQGYYFSKPVTVSEIELML 874 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 709 bits (1830), Expect = 0.0, Method: Composition-based stats. Identities = 94/508 (18%), Positives = 190/508 (37%), Gaps = 21/508 (4%) Query: 149 VMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQN 208 F A W G E R + T + L +I Sbjct: 629 DSHFYAAMWNTLVATGAWKGEIWNKRKNGEVYPERLAITAVKDARGVVINYVASLSDIT- 687 Query: 209 AREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNM 268 H + IRS A D TGL NR ++L L + G G ++ + L +F Sbjct: 688 ---LHKAAEDEIRSLAFFDPLTGLPNRRLLMDRLQQALVASSRSGKAGALLFLDLDNFKN 744 Query: 269 LSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAG-- 326 L+DT GH + + L + G +AR +F +L + + E+ + Sbjct: 745 LNDTLGHDIGDLLLQQVAQRLKNCVRE--GDTVARIGGDEFVVMLEDLSAESIEAASQTE 802 Query: 327 ----QLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNS 381 ++I ++ + + + IG + S Q + + + A+ A A G N+ Sbjct: 803 AVGWKIISTLNKPYHLEKFEVHSTPSIGATLFDSRPQIIDDLFKQADIAMYQAKKAGRNT 862 Query: 382 WAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NE 440 +D + + + + + R L+ + V + E + R Sbjct: 863 MRFFDPQMQDTLNTRTALEADLRKSIERREFNLFYQIQVDEMNRPVGAEALIRWIHPKRG 922 Query: 441 EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPE------ENLAIQVTVESLIRPRF 494 VS AE++P+ + L + L+ W LA+ V+ + + F Sbjct: 923 MVSPAEFIPLAEETDLILNIGLWVLQEACAQLKTWQNNPLTRNLVLAVNVSAKQFRQSDF 982 Query: 495 QRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVS 554 +R ++ ++ +EL E+ + ++I ++ + +GV+ +++ G S Sbjct: 983 ATQVR-VFVEKYAIDPSKLKLELTESMLQENIEDTILIMNALKEIGVQFSLDDFGTGYSS 1041 Query: 555 TSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTL 614 +IK+L + LK+ V +++ +++ +V++++ V A GV ++ + Q L Sbjct: 1042 LQYIKKLPLNQLKIDQSFVHDLDFDRDDKAIVRAIIAMAKSLQLDVIAEGVETQEQRQLL 1101 Query: 615 IQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 + +G T QG F+ P+ + Sbjct: 1102 LNKGCTHFQGYLFSKPLPIREFDALLER 1129 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 708 bits (1829), Expect = 0.0, Method: Composition-based stats. Identities = 86/485 (17%), Positives = 197/485 (40%), Gaps = 17/485 (3%) Query: 169 ETRATRILNGERGSNVLGT-IYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQD 227 ETR + + + V+ + P AL + +I + R R + A D Sbjct: 385 ETRELSLCHRDGAELVVEAMATQVPHGDDQALCLMFHDITDRR----RFQEELLHQATHD 440 Query: 228 VKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTN 287 TGL NR +++L + + G ++M L +F +++DT GH+ ++ ++ Sbjct: 441 TLTGLPNRSLLEDRLNQAVAGARRRGQMVALLMFDLDNFKVVNDTLGHTAGDQLLRSVAA 500 Query: 288 LLSTFMMRYPGALLARYHRSDFAALLPHRTL-KEAESIAGQLIKAVDTLPNNKMLDRDDM 346 + +F+ AR +F +L + T +A ++A + + Sbjct: 501 RIRSFVRNC--DTFARLGGDEFVIVLTNLTRMDDAVTVAESFRNLLAMPFFLGGREIFIT 558 Query: 347 IHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQ 405 +GI + G E +++ A++A + G NS+ + + + +K + T + + Sbjct: 559 ASMGISLFPDDGDTMEALIKKADTAMYHIKESGRNSFQFFAEEMNQKVNARLTIETGLRR 618 Query: 406 MLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRL 463 L +G L+ +P + G V E + R + +S A+++P+ GL E Sbjct: 619 ALEKGEMLLHYQPRLEPGTGAVVGMEALVRWNSPDMGLISPADFIPIAEDSGLIVEIGDW 678 Query: 464 QISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELA 518 ++ W +++ ++ + F + + Q + +EL Sbjct: 679 VLATACCQALEWHRMGHDSLRVSVNISARQFVGHDFVDRVVRIIEQ-SGLSPHFVELELT 737 Query: 519 EADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEK 578 E + ++ ++ + G+ ++++ G S +++K V++LK+ + ++ K Sbjct: 738 ETALTHNVDETVKIMNRLRERGITISIDDFGTGYSSLNYLKRFPVDVLKIDKSFIDDMVK 797 Query: 579 RTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVK 638 R E+ +V +++ +V A GV + + + L++ QG +F+ P + + Sbjct: 798 RREDAAIVATIIGIAHHMHMKVVAEGVETAEQMKLLMEGNCEEIQGFYFSRPLPPEEFER 857 Query: 639 KYSQR 643 + R Sbjct: 858 YIAGR 862 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 708 bits (1829), Expect = 0.0, Method: Composition-based stats. Identities = 92/498 (18%), Positives = 181/498 (36%), Gaps = 16/498 (3%) Query: 149 VMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQN 208 + W AG E R + ++ S + +I Sbjct: 320 DAAYYDAMWRGVHEAGHWQGEIWNRRKNGEIFPELLTLSVVRDHNGKVSHYVGVFSDISR 379 Query: 209 AREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNM 268 +E + ++ A D T L NR+ + +LA +E ++ G V+ + + F Sbjct: 380 MKE----TEARLQRLAHYDALTDLPNRVLLNLRLAHGVERVQRSGEMLAVLFLDIDRFKN 435 Query: 269 LSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQ 327 ++D+ GH +E + L + + LAR +F LL + + A + Sbjct: 436 VNDSLGHPVGDELLIEIARRLRSRIRAE--DTLARLGGDEFVILLDRIRSANDVADFAQE 493 Query: 328 LIKAVDTLPNN-KMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIY 385 +I ++ + IGI + D Q++ +A++A A G N + Y Sbjct: 494 IIDLLNQSFQLASGQEVFVGASIGISLYPLDTDDATQLISNADAALYQAKEAGRNVYRFY 553 Query: 386 DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFDG-NEEVS 443 L + + + L RG L+ +P V + G+V E + R ++ Sbjct: 554 TADLTRAAHERLGLEAALRRGLERGEFVLHFQPVVALDKGEVVGAEALVRWNHPTEGMIA 613 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN----LAIQVTVESLIRPRFQRWLR 499 ++P+ + GL + R W + +A+ ++ +R Sbjct: 614 PLRFIPLAEETGLIVPLGEWVLESACRQGREWLDCGRPLTIAVNLSTRQFRAGDLTATVR 673 Query: 500 DTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIK 559 D L + + +E+ E+ V + R + + LGVR++++ G S +++K Sbjct: 674 DILDRT-GFPAALLELEITESTVMEDADRAVATLAALKGLGVRLSIDDFGTGYSSLAYLK 732 Query: 560 ELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGV 619 V+ LK+ VR+I ++++V ++V V A GV + + L G Sbjct: 733 RFAVDALKIDRSFVRDIADDENDRMIVATVVAMAHQMRLGVIAEGVETAEQLAFLRSLGC 792 Query: 620 TGGQGDFFASSQPLDTNV 637 QG Q + Sbjct: 793 EAYQGYLVGRPQAAADFL 810 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 708 bits (1829), Expect = 0.0, Method: Composition-based stats. Identities = 85/503 (16%), Positives = 185/503 (36%), Gaps = 22/503 (4%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F W + AG E R + + T S +I + Sbjct: 530 FFQEMWEEIHSAGGWQGEVWDRRKNGEVYPKWLTISAVMSDNGTVSHYVGTHHDITERKI 589 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + I+ A D T L NR ++L + + G ++ I L F L+D Sbjct: 590 ----AEERIKELAFFDALTRLPNRTLLLDRLRQAITASARNEACGALLFIDLDHFKTLND 645 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR------TLKEAESIA 325 T GH + + + L+ + +AR +F +L + + E++ Sbjct: 646 TLGHDKGDLLLQQVARRLADSV--LESDTVARVGGDEFVVVLGNLHKNRQEAANQTEAVG 703 Query: 326 GQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAI 384 +++ + + + ++ IG +R Q +++++ A+ A + +G N+ Sbjct: 704 ERILAVLGSPYHLGKIEYRTSASIGATVFRGHQASIDELLKQADLAMYKSKERGRNAVRF 763 Query: 385 YDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVS 443 +D + + + L+ + V +V E + R V Sbjct: 764 FDPDMQTVVVQRAALEAGLRNAIEDNQFLLHYQAQVVGT-RVTGAEALVRWQHPQRGIVP 822 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP------EENLAIQVTVESLIRPRFQRW 497 AE++P+ + GL + L W +A+ V+V+ + F Sbjct: 823 PAEFIPLAEETGLIVALGSWVLEAACAQLARWAARPDMAHLTIAVNVSVQQFRKADFVDN 882 Query: 498 LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 + + + ++ R+ +EL E+ + ++ + + + A G+ A++ G+ S S+ Sbjct: 883 VLTIIGRT-GARPDRLKLELTESVLVDNVQDIIEKMSALKAKGIVFALDDFGIGYSSLSY 941 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 +K L ++ LK+ VR++ + + ++ +++V V A GV + ++ L Sbjct: 942 LKRLPLDQLKIDRSFVRDVLVDSNDAVIARTIVALARSLGLGVIAEGVETEAQRDFLAAA 1001 Query: 618 GVTGGQGDFFASSQPLDTNVKKY 640 G QG +F P++ Sbjct: 1002 GCYAYQGYYFCRPLPIEDFEALL 1024 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 708 bits (1829), Expect = 0.0, Method: Composition-based stats. Identities = 95/492 (19%), Positives = 187/492 (38%), Gaps = 22/492 (4%) Query: 166 ELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAA 225 E R + R ++ I P S +I + R + I A Sbjct: 346 WQCEYRVSMPDGSVRW-HITNAIPHREPDGSVVSHGFTMDITD----RKRAEQEIERLAF 400 Query: 226 QDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTL 285 D TGL NR ++L + + G ++ I L +F L+DT GH + + Sbjct: 401 YDALTGLPNRRMLLDRLQRAVAATSRTQQFGALLFIDLDNFKDLNDTLGHDMGDHLLSQV 460 Query: 286 TNLLSTFMMRYPGALLARYHRSDFAALLPHR------TLKEAESIAGQLIKAVDTLPNNK 339 L + +AR+ +F +L +AE +A +L+ +++ Sbjct: 461 AARLLACVRET--DTVARFGGDEFVVMLETLRPELTEAASQAEIVAEKLLASLNQPFALG 518 Query: 340 MLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVR 398 IGI + + +++++ A+ A A G N+ +D + Sbjct: 519 GQQHYSTPSIGITLFGDERLSVDELLKRADLAMYQAKGAGRNTQRFFDPDMQAAVNARSN 578 Query: 399 WRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLS 457 + Q L+RG +Y +P V ++ E + R +S A+++P+ Q GL Sbjct: 579 LEADLRQGLARGELCVYYQPVVDHRARLLGVEALVRWRHPVRGMISPADFIPLAEQTGLI 638 Query: 458 EEYDRLQISRLIPLLRYW------PEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRK 511 + + L+ W ++++ V+ +P F + TL C + + Sbjct: 639 LPLGQQVLQTACGQLQRWGERKQTRHLSVSVNVSARQFRQPGFVAEVLQTLQGC-GADPR 697 Query: 512 RIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPG 571 ++ +EL E+ + + + + GV A++ G S S++K L ++ +K+ G Sbjct: 698 KLKLELTESLLLGDVEDTIARMEQLKREGVGFALDDFGTGYSSLSYLKRLPLDQVKIDQG 757 Query: 572 LVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQ 631 VR++ + +V++++ +V A GV + + L G G QG F Sbjct: 758 FVRDVLTDPNDAAIVRTILALAQSLDLEVVAEGVETTGQLAFLRLHGCEGFQGYLFGRPG 817 Query: 632 PLDTNVKKYSQR 643 P++ S Sbjct: 818 PVEDIDAYLSHE 829 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 708 bits (1829), Expect = 0.0, Method: Composition-based stats. Identities = 91/502 (18%), Positives = 172/502 (34%), Gaps = 17/502 (3%) Query: 148 IVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQ 207 + L+ E R VLG+ A + +I Sbjct: 86 QHAFVIEQMQLRAAGVLGHNYELTGLRKDGSTLPIMVLGSPSV--IGGLPASVGTVLDIS 143 Query: 208 NAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFN 267 + IR A DV TGL NR + LL E+ + V+ + L F Sbjct: 144 ----AQKAAEQRIRELADYDVLTGLPNRRLLRERFEQLLAAAEREKSEIAVIFLDLDHFK 199 Query: 268 MLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQ 327 ++D+ GHS +E + L + + R LAR +F +P A +A + Sbjct: 200 RVNDSLGHSVGDELLCEVARRLDSVVRRI--DTLARLGGDEFIFAMPGFHTAAAVEVARR 257 Query: 328 LIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYD 386 L++ + +GI + G+D E ++ +A++A A G N++ Y Sbjct: 258 LVEVFSRPFEVAGHELTVTPSLGISIYPHDGRDLETLLRNADTAMYRAKEMGRNAFQFYS 317 Query: 387 DSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSS 444 + + + + + L + L+ +P V G + E + R + Sbjct: 318 SEMNTTTLDRLLMESNLRRALVQNEFILHYQPLVNLETGLIIGVEALIRWLHPELGLIMP 377 Query: 445 AEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLR 499 ++ + + GL + + W + L A+ V + F + Sbjct: 378 DRFIHVAEETGLINPIGDWVLCEACRQAKAWCDAGLPPICMAVNVAPVQFRQAGFVEMVA 437 Query: 500 DTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIK 559 L R+ +EL E V + ++ +GV ++++ G S +++K Sbjct: 438 GALA-TSGLDASRLELELTERTVMHDADINMGTLSALHRMGVELSLDDFGTGYSSLAYLK 496 Query: 560 ELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGV 619 V LK+ V ++E ++ + ++V V A GV + L + G Sbjct: 497 RFPVGKLKIDRSFVNDLETDPDDWAIASTIVSMGRSLRMTVLAEGVEKVEQLALLRKMGC 556 Query: 620 TGGQGDFFASSQPLDTNVKKYS 641 QG +F+ D Sbjct: 557 DMAQGYYFSRPMSADGMADMLR 578 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 707 bits (1827), Expect = 0.0, Method: Composition-based stats. Identities = 96/486 (19%), Positives = 192/486 (39%), Gaps = 24/486 (4%) Query: 177 NGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRL 236 GER + + L +++I R + IR A D TGL NR Sbjct: 223 GGERTLHAELVTVLDEQGEAVCLTGTIQDITE----RKRAEEQIRLLAYYDALTGLPNRR 278 Query: 237 FFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMM-- 294 FF QL L + V+ + L F +++DT GH + + + L + Sbjct: 279 FFLQQLEQALVFANRYDRMLAVLFLDLDRFKLVNDTLGHGVGDRLLQDVADRLLRCVRRG 338 Query: 295 --------RYPGALLARYHRSDFAALLPHRTL-KEAESIAGQLIKAVDTLPNNKMLDRDD 345 P +L++R +F +L ++ IA ++++AV + + + Sbjct: 339 DCLARADEECPPSLVSRLGGDEFTIMLSDIEHFQDVAKIARRILEAVSVPYSLEGQEVFV 398 Query: 346 MIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIE 404 IGI + ++ +A+ A A QG N + IYD+S+ K + + + Sbjct: 399 STSIGISLYPFDATTASDLIRNADGAMYQAKEQGRNGYQIYDESMNAKALERIILESQLH 458 Query: 405 QMLSRGGPRLYQKPAV-TREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDR 462 + L +Y +P V + G+V E + R V ++P+ + GL + D+ Sbjct: 459 KALKEEEFIVYYQPQVSNQSGRVVGIEALVRWNSKELGLVEPGRFLPLAEEIGLVIQIDQ 518 Query: 463 LQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIEL 517 + + W + LAI ++ + ++ + L + + +EL Sbjct: 519 WVMREACRQHKLWLDAGFPPVTLAINISGQQFMKNELLETVTSVLKE-SGLDPGLLELEL 577 Query: 518 AEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIE 577 E + H R ++ + +GVR+A++ G S S++K +++LK+ + +I Sbjct: 578 TEGVLMAHTERTVKTLQALKGMGVRLAIDDFGTGFSSLSYLKRFPLDVLKIDRTFINDIT 637 Query: 578 KRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNV 637 ++ + + +E +V A GV ++ + L + G QG F+ P Sbjct: 638 TDPDDAAITLATIEMAHTMKLKVIAEGVETKPQLDFLTKNGCDMYQGYLFSKPVPSTELP 697 Query: 638 KKYSQR 643 + +++ Sbjct: 698 RLFNRW 703 >UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H6_9PROT Length = 837 Score = 707 bits (1825), Expect = 0.0, Method: Composition-based stats. Identities = 93/510 (18%), Positives = 189/510 (37%), Gaps = 21/510 (4%) Query: 151 LFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAR 210 F A W + +G E R + T + ++ + +I Sbjct: 334 EFYAAMWKRLLGSGSWTGEIWDKRKNGEVYPKWLTITAVKDNEGVTTEYVAIFSDIT--- 390 Query: 211 EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLS 270 + I + A D T L NR +++ + +G ++ + + F +L+ Sbjct: 391 -LRKHAEEEIYTLAFYDSLTKLPNRRHLLDRINQARSISARSNHYGALLFLDMDRFKILN 449 Query: 271 DTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE------AESI 324 DT GH + ++ + + +AR +F L+ I Sbjct: 450 DTLGHDYGDLFLVEVSRRMRNCVR--DMDTVARIGGDEFVVLIEEIGTDNEEVSTKVALI 507 Query: 325 AGQLIKAVDTLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWA 383 A ++ A+ K + IG+C + + + + ++ HA+ A A G N Sbjct: 508 AEKIRAALTEPYLLKDKEHHSSPSIGVCLYLGNEESVDTLLRHADLAMYQAKESGRNGVR 567 Query: 384 IYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NEEV 442 +D ++ + ++ RLY + +T + + E + R V Sbjct: 568 FFDPAMQLAVETRAALEADMRHAVTGKQLRLYYQIQLTSDHRPLGAEALIRWMHPVRGLV 627 Query: 443 SSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW------PEENLAIQVTVESLIRPRFQR 496 S A+++P+ + L E + L W LAI V+ + + F Sbjct: 628 SPAQFIPIAEESSLILEIGHWVLETACKQLVLWSKHERTRNLILAINVSAQQFNKHDFVD 687 Query: 497 WLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTS 556 + TL+ + R+ +EL E+ V ++ + + + ALGV++A++ G S S Sbjct: 688 TV-STLLHLHQLNPNRLKLELTESVVLSDVADVVSKMHALKALGVKLALDDFGTGYSSLS 746 Query: 557 WIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQ 616 ++K+L ++ +K+ V ++ + ++VQ+++ V A GV + + L Q Sbjct: 747 YLKQLPLDQIKIDRSFVSDVTTDPSDAVMVQTIINLAHNFRMNVIAEGVETEDQLNFLKQ 806 Query: 617 RGVTGGQGDFFASSQPLDTNVKKYSQRYSV 646 G QG F P+D Q ++ Sbjct: 807 NGCMAYQGFLFGKPMPIDEFEALLGQTQTL 836 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 707 bits (1825), Expect = 0.0, Method: Composition-based stats. Identities = 99/483 (20%), Positives = 192/483 (39%), Gaps = 16/483 (3%) Query: 168 LETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQD 227 ++ R T ER + G + L ++I + +R +R A D Sbjct: 387 IDHRITCPDGSERILHEDGELVYDDEGKPLLLRGTAQDITERHDYQNR----LRHLANFD 442 Query: 228 VKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTN 287 TGL NR F ++L L + + ++ + + F ++D+ GH +E Sbjct: 443 PVTGLPNRTLFKDRLQHALANATRNQRLVALLFLDMDQFKNVNDSLGHMMGDELLRQTAE 502 Query: 288 LLSTFMMRYPGALLARYHRSDFAALLPHRTL-KEAESIAGQLIKAVDTLPNNKMLDRDDM 346 L + G +AR+ +F LL + ++A A ++++A+ + Sbjct: 503 RLLGCVRE--GDTVARFGGDEFIILLENIEHSEQASLSAERVVQAMRRPFRLGEHEHFCN 560 Query: 347 IHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQ 405 + IGI + + E ++ HA+SA A QGG + Y + + + + + Q Sbjct: 561 VSIGISLYPEDDEHPEDLVRHADSAMYLAKAQGGAGYRFYTPDMNTRAMERLLLQNQLHQ 620 Query: 406 MLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRL 463 L G +++ +P + R G++ E + R V AE++PM GL E Sbjct: 621 ALELGQFQVHYQPQMDLRSGRICGVEALVRWQHPERGLVPPAEFIPMAEDTGLIEPLGEW 680 Query: 464 QISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELA 518 + +R W + L ++ ++ P + L + + +R+ +E+ Sbjct: 681 VLRTAAREVRGWQDRGLPALNLSVNLSPRQFRHPDLPGMVERVLAE-SGLEAERLELEIT 739 Query: 519 EADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEK 578 E + + + + LGVRV+++ G S +++K L V LK+ V I + Sbjct: 740 ERLIIVDLEHTVDTLSRIARLGVRVSIDDFGTGHSSLAYLKRLPVHALKIDREFVDGIGQ 799 Query: 579 RTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVK 638 +++ + ++++ QV A GV +R + L + G QG F A P Sbjct: 800 DSDDAAIAEAVIALGRTLRLQVIAEGVETREQASFLREHGCDAVQGFFIARPMPAGELTG 859 Query: 639 KYS 641 S Sbjct: 860 WLS 862 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 706 bits (1824), Expect = 0.0, Method: Composition-based stats. Identities = 92/509 (18%), Positives = 194/509 (38%), Gaps = 21/509 (4%) Query: 148 IVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQ 207 F W E N+ T S R+I Sbjct: 275 QDKAFYKEMWNSINTTDAWRGEVSNRSKSGDIYAKNLTITAVRDGKGVVSNYVATFRDIT 334 Query: 208 NAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFN 267 ++ I + A D T L NR + L +L + H ++ + L +F Sbjct: 335 TSKA----ASEKINNLAYFDPLTQLPNRRMLLDSLRHVLTISARSNQHCALLFLDLDNFK 390 Query: 268 MLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQ 327 L+DT GH + + L+ + G ++AR +F LL + +L+ E+ Sbjct: 391 TLNDTLGHDVGDLLLQQVATRLTDCVRE--GDIVARLGGDEFVVLLENLSLQAIEAANKA 448 Query: 328 ------LIKAVDTLPNNKMLDRDDMIHIGICAWRSGQD-TEQVMEHAESATRNAGLQGGN 380 +I + M IG+ + + E++++ A+ A + G N Sbjct: 449 KKVAKKIIFELAQYYQLNMHRYHSTTSIGVTIFSGNETGIEELLKQADIAMYQSKAAGRN 508 Query: 381 SWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN- 439 +W ++ ++ E + + + +L+ + V+ GQ E + R Sbjct: 509 TWHFFNKTMQESIIARADMERDLRKAIEDNQFQLHYQAQVSSSGQTLGAEALIRWQHPER 568 Query: 440 EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP------EENLAIQVTVESLIRPR 493 +VS ++P+ + GL + + L+ W + LA+ ++ + L + Sbjct: 569 GQVSPFNFIPLAEETGLILPIGQWVLDSACAQLKAWQKNPLTQDLVLAVNISAKQLHQED 628 Query: 494 FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLV 553 F ++ TL + R+ +EL E+ + ++IS + + +++ +G+ +++ G Sbjct: 629 FVEQVKATLKR-HDINPARLKLELTESMLVENISDIITKMNILSKIGISFSLDDFGTGYS 687 Query: 554 STSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQT 613 S ++K+L + +K+ VR++ ++ +V++++ V A GV + E Q Sbjct: 688 SLQYLKKLPLNQIKIDQSFVRDLITDASDRAIVRTIITMSHSLDISVIAEGVETVEERQY 747 Query: 614 LIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 L+ G T QG F+ P++ + Sbjct: 748 LLDNGCTHYQGYLFSKPVPINEFEVLLKK 776 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 706 bits (1824), Expect = 0.0, Method: Composition-based stats. Identities = 88/476 (18%), Positives = 187/476 (39%), Gaps = 15/476 (3%) Query: 174 RILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLN 233 R+ EW + ++++ +ARE + I+ A D TGL Sbjct: 617 RVQARPTRIVQFQIESEWQDGVLERIRGTVQDVTSARE----AEAHIQYLAHYDSLTGLP 672 Query: 234 NRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFM 293 NR + NQ + L ++ V+ + L +F ++D+ GH + + L+ + Sbjct: 673 NRSAWMNQARSALSLAQRHQHILAVLFLDLDNFKTVNDSLGHPVGDRLLAAVAQRLAHCL 732 Query: 294 MRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGIC 352 AR +F ALLP T ++A ++A +++ A+ T + + IGI Sbjct: 733 REE--DSFARLGGDEFVALLPRVTRAEDAAAVARKMLDALATPVVIDDHELAPSVSIGIS 790 Query: 353 AWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGG 411 + G D + +++HA++A A G N++ + + + + + + + R Sbjct: 791 LFPSDGTDVDTLLKHADTAMYGAKEVGRNNFQFFVPEMNTRALERLLLENALRRAIERNE 850 Query: 412 PRLYQKPAVTREG-QVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLI 469 L+ +P V + + E + R + V A+++P+ GL + Sbjct: 851 LTLHYQPQVAATSDRPNGCEALVRWQHPDFGLVPPAQFIPIAEDSGLIVPLGEWVLREAC 910 Query: 470 PLLRYWPEENL----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQH 525 W L + ++ R F + L + + +RI +E+ E+ + Sbjct: 911 RQQVKWARSGLHLMVGVNISALQFRRADFVDSVVQVLAET-GANPERIELEITESALMDA 969 Query: 526 ISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLL 585 L +R + +G+ +A++ G S +++K L + LK+ V+++ E+ + Sbjct: 970 SDALSRRLRELANMGLSLALDDFGTGYSSLAYLKRLPIGRLKIDRSFVKDLPGDPEDAAV 1029 Query: 586 VQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 + + +V A GV + ++ L+ RG QG ++ + Sbjct: 1030 TAATLSLARDLGLEVVAEGVETVAQRDFLVARGCHTLQGYLYSRPLDVAAFEAWMQ 1085 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 706 bits (1824), Expect = 0.0, Method: Composition-based stats. Identities = 106/509 (20%), Positives = 194/509 (38%), Gaps = 23/509 (4%) Query: 149 VMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSAL-DTLLREIQ 207 F W Q L NGE + L S +I Sbjct: 541 DAQFYQQMW-QSILDDGHWQGEIWDLKKNGELHAKWLSISVIRRADGSIYRHVGQFSDIT 599 Query: 208 NAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFN 267 + R D LI A D T L NR F ++ + + G +G ++ + L F Sbjct: 600 EKK----RKDELIWEQANFDTLTNLPNRRLFADRFRQAISAGARSGRYGALLSLDLDQFK 655 Query: 268 MLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE------A 321 L+DT+GHS ++ + L++ + +AR +F +L ++ A Sbjct: 656 RLNDTFGHSMGDKLLIEVARRLTSCVREE--DTVARMGGDEFLVILNGLGSEQNEAAIRA 713 Query: 322 ESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGN 380 E IA ++ + + IGI +R D E+++ H ++A + +G N Sbjct: 714 ELIAEKIRNELCRPYQLDKTEHHSSSSIGIVLFRGHSDDPERLLAHVDTAMYQSKAKGRN 773 Query: 381 SWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN- 439 + +D S+ E + T + L R L+ + + G+ E + R + Sbjct: 774 AICFFDSSMQEILEKRGQLETALRGALERKEFLLHYQLQMDSSGRPIGAEALLRWNNAKL 833 Query: 440 EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN------LAIQVTVESLIRPR 493 VS +++P+ + GL + L W + +A+ V+ Sbjct: 834 GSVSPVQFIPVAEESGLILPIGHWVLETACAQLARWQSDPRFNRLCIAVNVSAIQFREAA 893 Query: 494 FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLV 553 F +R+ L Q Q + +EL E+ V I+ + + LGV+ +++ G Sbjct: 894 FVAKVRNVLQQ-SGIQPWLLKLELTESLVLDDINDSILKMEALKNLGVKFSMDDFGTGYS 952 Query: 554 STSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQT 613 S S++ L ++ LK+ VR+I + +VQ+++ +V A GV + + + Sbjct: 953 SLSYLSRLPLDQLKIDQSFVRDITTDQHDAAIVQTIISMALSLGMEVIAEGVETEEQREF 1012 Query: 614 LIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 L RG QG +A P++ K +Q Sbjct: 1013 LDLRGCQAYQGYLYAKPMPIEELEIKLAQ 1041 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 706 bits (1824), Expect = 0.0, Method: Composition-based stats. Identities = 94/494 (19%), Positives = 202/494 (40%), Gaps = 21/494 (4%) Query: 163 AGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRS 222 G E R ++ T + ++ + +I A+ R I + Sbjct: 479 TGSWSGEIINRRKNGEIYPEHLTITAVKDADGQTTNYVGMFTDISVAKAASER----IEN 534 Query: 223 YAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQF 282 A D T L NR F ++L L + + G +G ++ + L F L+DT GH + Sbjct: 535 LAFFDPLTNLPNRRLFSDRLTQALVNSTRSGNYGALVFLDLDHFKSLNDTLGHDYGDMLL 594 Query: 283 FTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAES------IAGQLIKAVDTLP 336 + LS + G +AR +F L+ + + + E+ I +++ +++ Sbjct: 595 KQVALRLSNCVRE--GDSVARLGGDEFVLLVENLSANDVEAAHQIEAIGDKILMSLNQPY 652 Query: 337 NNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRG 395 + + IGI + Q +E +++HA+ A A G N+ +D + E Sbjct: 653 QLQSHEYLSTPSIGISLFNGHQESSEDLLKHADIAMYQAKKAGRNTLRFFDPLMQETINM 712 Query: 396 NVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQF 454 V +++ + + LY + + GQ E + R +S +++P+ + Sbjct: 713 RVDLERELKKAIEQKQFELYYQVQMNSAGQPSGAEALIRWRHPERGIISPIQFIPVAEET 772 Query: 455 GLSEEYDRLQISRLIPLLRYWP------EENLAIQVTVESLIRPRFQRWLRDTLMQCEKS 508 GL + +++ L+ W + +LAI V+ + ++P F +++++ Sbjct: 773 GLITQIGEWVLNQACLQLQAWQLDQASKDFSLAINVSAKQFLQPDFANQVKNSIRSFH-I 831 Query: 509 QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKL 568 ++ +EL E+ + +I + + + +G++ +++ G S ++K L + LK+ Sbjct: 832 DNTKLKLELTESMLIDNIEYVIHTMNTLGEIGIQFSLDDFGTGYSSLQYLKMLPLSQLKI 891 Query: 569 HPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFA 628 VR++ N+ +V +++ V A GV + + Q L G QG +F+ Sbjct: 892 DQSFVRDLATDNSNKTIVLTIITMAHSLGLNVIAEGVETDEQLQLLNAHGCGNYQGYYFS 951 Query: 629 SSQPLDTNVKKYSQ 642 ++ +Y Q Sbjct: 952 EPLSINEFNHQYMQ 965 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 706 bits (1823), Expect = 0.0, Method: Composition-based stats. Identities = 88/501 (17%), Positives = 183/501 (36%), Gaps = 26/501 (5%) Query: 165 QELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYA 224 Q + + G + + L T Q ++ + A Sbjct: 418 QRCGAWQGEVWDRRKNGEVYPVWLTISAVKGQGGLVTHYVATHIDITQRKAVEDQLHKLA 477 Query: 225 AQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFT 284 D T L NR ++L +L + G +M I L +F L+DT GH + Sbjct: 478 FYDPLTQLPNRRLLLDRLGHVLAGSTRSRNQGAIMFIDLDNFKALNDTQGHDVGDRLLAE 537 Query: 285 LTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK-----EAESIAGQLIKAVDTLPNN- 338 + L + + + +AR +F ++ + E++AG+++ A+D Sbjct: 538 VAQRLKSSVRQC--DTVARLGGDEFVVMVQDLAADSMVVAQVEAVAGKILAALDCPYRLV 595 Query: 339 --------KMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSL 389 L+ IGI + + +++++ A+ A A G N+ +D + Sbjct: 596 FDAELGRRNALNYHCTASIGITLFGAHSTNVDELLKQADLAMYQAKDSGRNAIRFFDPEM 655 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCRIFDGN-EEVSSAEY 447 V + + + G +LY +P V ++ E + R V +E+ Sbjct: 656 QAAITSRVALEADLREAVEAGQFQLYYQPQVVGESHRLTGAEALLRWHHSRRGMVPPSEF 715 Query: 448 MPMVLQFGLSEEYDRLQISRLIPLLRYWP------EENLAIQVTVESLIRPRFQRWLRDT 501 +P+ + GL + + L W + +A+ V+ + + F + Sbjct: 716 IPLAEETGLILPLGQWVLETACAQLATWASQPEMAQLTVAVNVSAHQIRQTDFVDQVLAV 775 Query: 502 LMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKEL 561 L + +R+ +EL E+ + ++ + + L+ + GV +++ G S S++K L Sbjct: 776 LADA-GANPQRLKLELTESLLVSNVEDIIAKMTLLKSRGVGFSLDDFGTGYSSLSYLKRL 834 Query: 562 NVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTG 621 ++ LK+ V + + + + +V V A GV + + L + G Sbjct: 835 PLDQLKIDQSFVNEVLTDANDAAIAKMIVALAESLGLAVIAEGVETEEQRNFLAESGCHA 894 Query: 622 GQGDFFASSQPLDTNVKKYSQ 642 QG F+ PL + + Sbjct: 895 YQGYLFSKPLPLAGFEQWIGK 915 >UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WS3_RHOFD Length = 1034 Score = 706 bits (1823), Expect = 0.0, Method: Composition-based stats. Identities = 93/488 (19%), Positives = 179/488 (36%), Gaps = 17/488 (3%) Query: 170 TRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVK 229 + GS P I+ + + I A D+ Sbjct: 550 WHGEFHSRRKDGSLFWEQAAIAPIFDDHGRPIHYLAIKEDITKRKAAEAEIEHLAFYDLL 609 Query: 230 TGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLL 289 TGL NR +++L +L + HG ++ I L +F L+DT GH Q + + L Sbjct: 610 TGLPNRRLLNDRLQQVLAVGTRSRRHGALLFIDLDNFKNLNDTQGHEQGDVLLQQVAQRL 669 Query: 290 STFMMRYPGALLARYHRSDFAALLPHRTLKE------AESIAGQLIKAVDTLPNNKMLDR 343 + + +AR DF +L + ++ AE + +++ A+ Sbjct: 670 NFCVREC--DTVARLGGDDFVVMLQDLSEQQTEAATQAEGVGQKILDALHQPYPFGHFTH 727 Query: 344 DDMIHIGICAWRSGQD-TEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTL 402 +G+ + + QD E++++ A+ A A G N+ +D + Sbjct: 728 HGSASVGVALFNASQDTVEELLKRADLALYQAKDAGRNTLRFFDPDMQAVISARAEMEAD 787 Query: 403 IEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYD 461 + L LY +P V G++ E + R V+ A ++P+ GL Sbjct: 788 MRLGLQENQFLLYYQPQVNHAGRLIGVEALVRWQHPLRGLVAPAHFIPLAEDTGLILPLG 847 Query: 462 RLQISRLIPLLRYWP------EENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIII 515 + + L+ W + +A+ V+ F + TL + + R+ + Sbjct: 848 QWVMEAACRQLQLWRTQAHTAQLTIAVNVSALQFHGESFVSDVLATLART-GAPADRLKL 906 Query: 516 ELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRN 575 EL E+ + + + + + + A GV +++ G S S++K L ++ +K+ V + Sbjct: 907 ELTESLLVKDVDGVIAKMVALKAHGVGFSLDDFGTGYSSLSYLKRLPLDQIKIDQSFVSD 966 Query: 576 IEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDT 635 ++ LV++ V G V A GV ++ + L G QG FF P+ Sbjct: 967 ALSNPKDAALVRATVAMGRGLGMMVIAEGVETQMQRDFLEGEGCLNFQGYFFGRPVPVAE 1026 Query: 636 NVKKYSQR 643 Sbjct: 1027 LACFLVAE 1034 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 705 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 82/484 (16%), Positives = 181/484 (37%), Gaps = 12/484 (2%) Query: 169 ETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDV 228 + + + G + R S T I + + + + A D Sbjct: 459 QWQGELWSQRKNGEIYPLWVTANAVRNSKEEITHFVAIFSDITLRKQTEQRLYYLAHHDA 518 Query: 229 KTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNL 288 TGL NR F ++L + ++ V+ I L F ++DT GH + + Sbjct: 519 LTGLPNRSLFLDRLEHAIHHAQRHHHRIAVLFIDLDRFKFINDTLGHPIGDILLKQVAER 578 Query: 289 LSTFMMRYPGALLARYHRSDFAALLPHRTLKEAES-IAGQLIKAVDTLPNNKMLDRDDMI 347 + + +AR +F ++ + T A S I ++I A + N K + Sbjct: 579 MRLNIRAE--DTIARLGGDEFTVIIENFTDTSAISLITQKIISACEKPFNIKGNELFVSA 636 Query: 348 HIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQM 406 IG+ + G + +++ A++A A +G + + + + + L+ + Sbjct: 637 SIGVSLYPEDGHEASMLLQRADAAMYQAKKRGKSCCQFFTTEINTAATEQLALKNLLRRA 696 Query: 407 LSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQ 464 L+R +LY +P + G + E + R D +S ++P+ + GL Sbjct: 697 LARKEFQLYYQPIINMESGAIVSVEALIRWVDPELGLISPNTFIPLAEENGLILPLGEWV 756 Query: 465 ISRLIPLLRYWPE-----ENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAE 519 + + W + +AI ++ L + F + + L + + +EL E Sbjct: 757 LQTACTQAKIWNQSNPYPVRIAINLSARQLEQTDFSERVSEILKKTP-FPTDHLELELTE 815 Query: 520 ADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKR 579 + + + + + +G R++++ G +++K ++ +K+ V+ I Sbjct: 816 SMLINRMESSLKTLNTLKKMGCRLSLDDFGTGYSPLAYLKRFPIDTVKIDRSFVQGISID 875 Query: 580 TENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKK 639 ++ + ++ V A GV +R + L + V QG F + P + +K Sbjct: 876 PDDAAITTAVTTMAHSLKRAVIAKGVETREQLNFLNEIKVDEAQGYFISYPVPAEELTQK 935 Query: 640 YSQR 643 ++ Sbjct: 936 LREK 939 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 705 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 93/502 (18%), Positives = 194/502 (38%), Gaps = 20/502 (3%) Query: 153 LAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQ 212 L Q +G E R S V T + +I + Sbjct: 911 LKHVLASLQHSGSWEGEILQKRKTGELYPSWVGITAVRDEEGDLVSFVCFFSDISERKAS 970 Query: 213 HSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDT 272 R I A D T L NR F ++L T L+ E+ G ++M + L F ++D+ Sbjct: 971 ERR----IHRLAYYDALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFLDLDRFKPINDS 1026 Query: 273 WGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLP-----HRTLKEAESIAGQ 327 GH+ + + LS + +AR +F LLP LK A +A Sbjct: 1027 LGHAAGDRMLQEVATRLSACV--SQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVAEL 1084 Query: 328 LIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYD 386 ++ + + + IG+ G + +M++A++A +A G N++ Y Sbjct: 1085 ILGRLARPFTLEGREFFVTASIGVALSPQDGAELSLLMKNADTAMYHAKEMGKNNFQFYQ 1144 Query: 387 DSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREG-QVHHRELMCRIFDG-NEEVSS 444 + + + + + + L G L+ +P T +G ++ E + R V Sbjct: 1145 AEMNARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPP 1204 Query: 445 AEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE-----NLAIQVTVESLIRPRFQRWLR 499 +E++P++ + GL + ++ LR W + +++ ++ + + Sbjct: 1205 SEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGERIA 1264 Query: 500 DTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIK 559 L + + +EL E+ + ++ ++ + LG+ +AV+ G S +++K Sbjct: 1265 AILYET-GIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNYLK 1323 Query: 560 ELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGV 619 + +++LK+ V + ++ + ++++ + V A GV S+++ L + G Sbjct: 1324 QFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGC 1383 Query: 620 TGGQGDFFASSQPLDTNVKKYS 641 QG F P + Y+ Sbjct: 1384 DEVQGYLFGRPMPAEQFGMLYA 1405 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 705 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 82/488 (16%), Positives = 179/488 (36%), Gaps = 25/488 (5%) Query: 169 ETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDV 228 E + + + ++ +I + + A D Sbjct: 772 EICNRAKDGSLYWVDTTIAPFIGDDGKPQSYISIRTDITQRKA----AEDKSNYLALYDP 827 Query: 229 KTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNL 288 T L NR ++L L + G G ++ + L F L+DT GH + + Sbjct: 828 LTNLPNRRLLLDRLTHALASAMRTGRGGALLFLDLDHFKTLNDTLGHDVGDLLLQQVAEC 887 Query: 289 LSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAG------QLIKAVDTLPNNKMLD 342 L+ + G +AR +F +L + +E E+ A +++ K + Sbjct: 888 LTACVRE--GDTVARLGGDEFVVILEGLSEQEVEAAAQAEVVGEKILNKFIEPYQFKGYE 945 Query: 343 RDDMIHIGICAWRSGQD---TEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRW 399 +GI + G++ ++++++ A+ A A G N+ + +D + E + V Sbjct: 946 YHITSSVGITLF--GKNNLKSDELLKQADIAMYQAKKLGRNALSFFDPKMQEGIQARVDM 1003 Query: 400 RTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSE 458 + + L + +L+ + V + E + R + E++ + G+ Sbjct: 1004 EHELRKALDKNEFQLFYQMQVGLSDRAVGAEALIRWIHPERGLIPPNEFVSIAEDCGMIL 1063 Query: 459 EYDRLQISRLIPLLRYW------PEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKR 512 I L+ W L++ V+ + + F + + + Sbjct: 1064 SIGAWVIDTACAQLKRWEQSERTRSLTLSVNVSAKQFRQADFVEQVTTAIAR-HGINPML 1122 Query: 513 IIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGL 572 + +EL E+ + HI ++ + +G+R +++ G S +++ L + LK+ Sbjct: 1123 LKLELTESALLDHIEDAVAIMNALKDIGIRFSLDDFGTGYSSLQYLRLLPLYQLKIDRSF 1182 Query: 573 VRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQP 632 VR+I NQ +V++++ + V A GV ++ + L+ G QG F+ P Sbjct: 1183 VRDIASSIGNQAIVRTIIAMAHTLNLNVIAEGVETQVQQGILLDSGCMHYQGYLFSEPVP 1242 Query: 633 LDTNVKKY 640 +D Sbjct: 1243 IDAFEALL 1250 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 705 bits (1820), Expect = 0.0, Method: Composition-based stats. Identities = 89/468 (19%), Positives = 182/468 (38%), Gaps = 21/468 (4%) Query: 187 TIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLL 246 + T ++ +I + + + + I A D T L NR F ++L Sbjct: 468 PLERDDLGTVRRAIEVVTDITDKKNR----EQEIHRLAFYDPLTRLPNRRLFFDRLEQAF 523 Query: 247 EDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHR 306 + G HG V+ + L +F L+DT GH + L + ++R Sbjct: 524 SASARSGQHGAVLFLDLDNFKTLNDTRGHDVGDLLLTMAAERLQEAVR--ANDTISRQGG 581 Query: 307 SDFAALLPHRTLK------EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQD- 359 +F LL + + + +A +A ++ A+D + + + IG+ + Sbjct: 582 DEFMVLLNNLSPERHAAISQAGRVAEKIRAALDQPFDLDGYEHHIGVSIGLSLFLGHDTP 641 Query: 360 TEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPA 419 +++ + A++A A G N +D + + + Q + +G +L+ +P Sbjct: 642 ADELFKRADAAMYQAKHAGRNQVRFFDPEMQAELEQASALVVDLRQAIWQGQFQLHYQPQ 701 Query: 420 VTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE 478 +G++ E + R VS +++P+ + L R + L W + Sbjct: 702 TANDGRIIGAEALLRWRHPERGPVSPMQFIPLAEESNLILAIGRWVLEEACGQLAAWADL 761 Query: 479 ------NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPV 532 LA+ V+ +P F +R L + K + +EL E+ V ++ Sbjct: 762 PAAGNCKLAVNVSARQFRQPEFVAEIRRILAAT-GADPKLLKLELTESIVMTELADTVSK 820 Query: 533 IRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEA 592 ++ + LG+ +++ G S + +K L +E LK+ VR++ + +V++++ Sbjct: 821 MQELRDLGIGFSMDDFGTGYSSLAQLKRLPLEQLKIDRAFVRDLGSDPHDDAIVETIIAM 880 Query: 593 CSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 QV A GV ++ + TL + G QG F+ P Sbjct: 881 GRTLDIQVIAEGVETKEQLATLARYGCDAYQGYLFSRPVPAAQFAHLL 928 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 705 bits (1820), Expect = 0.0, Method: Composition-based stats. Identities = 93/491 (18%), Positives = 186/491 (37%), Gaps = 17/491 (3%) Query: 165 QELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYA 224 Q+ + R ++ + G + + + T + Q D I A Sbjct: 498 QQWKQARGELVIYRKDGGSFWVDLEIVSVAAQNGDLTHWVAVGRDITQRKAADEKIHHLA 557 Query: 225 AQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFT 284 D T L NR ++L L D G++M I L +F +L+DT GHS+ + Sbjct: 558 FYDPLTELPNRQLLLDRLEQALADCTITRQEGVLMFIDLDNFKILNDTVGHSKGDLLLQK 617 Query: 285 LTNLLSTFMMRYPGALLARYHRSDFAALL------PHRTLKEAESIAGQLIKAVDTLPNN 338 + L + + +AR +F +L P ++A+ +A +++ + + Sbjct: 618 VAVRLKGCVRKL--DTVARLGGDEFVVMLQDLGTQPEAATRKAQIVAEKVLATLREPYDL 675 Query: 339 KMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNV 397 IG+ + + Q ++++ A+ A A G N+ +D + N Sbjct: 676 AGYQHYSTSSIGVTPFNARQGSVSELLKQADLAMYQAKTMGRNTVCFFDPDMQASVSANA 735 Query: 398 RWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGL 456 T + L ++ +P V RE ++ E + R VS AE++P+ + GL Sbjct: 736 ALSTDLRAGLREHQFLVHYQPQVDREQRITGVEALLRWKHPQRGMVSPAEFIPVAEETGL 795 Query: 457 SEEYDRLQISRLIPLLRYWPE------ENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQR 510 + + + L W + ++A+ V+V P F + + Q Sbjct: 796 ILPLGQWVLEQACLQLAVWQKRPETAGLSIAVNVSVRQFRHPDFVDMVMAAIKHT-GIQP 854 Query: 511 KRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHP 570 + +EL E+ + + + + ALGV +A++ G+ S S++K L ++ LK+ Sbjct: 855 HNLKLELTESLLADRMEIAIAKMGTLKALGVTLALDDFGMGYSSLSYLKRLPLDQLKIDK 914 Query: 571 GLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASS 630 + ++ + + +++ V A GV + ++ L G QG F Sbjct: 915 SFIADVFSDPNDAAICSAIISLAQSLGLDVIAEGVETEAQRSFLAGLGCGYYQGFLFCPP 974 Query: 631 QPLDTNVKKYS 641 P+ Sbjct: 975 LPIAEFEAFMQ 985 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 704 bits (1819), Expect = 0.0, Method: Composition-based stats. Identities = 87/499 (17%), Positives = 179/499 (35%), Gaps = 16/499 (3%) Query: 151 LFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAR 210 F W GQ E R + G + R S T I Sbjct: 339 EFYRAMWATLSSTGQWQGEIWNRR----KNGDIFPAWLTLCAVRNSEDKITNYVGISRDI 394 Query: 211 EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLS 270 + + A+ D TGL NR F ++L L + ++ + L F +++ Sbjct: 395 TLRKEAEERLSYQASHDALTGLPNRARFHDRLTHALARAGRDRHEFAILFLDLDRFKVIN 454 Query: 271 DTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLI 329 DT GH+ + +T L LAR+ +F LL ++A A +++ Sbjct: 455 DTLGHTVGDFLLQGVTKRLLGGTRE--SDTLARWGGDEFIILLESIRGAEDAAVAARRIL 512 Query: 330 KAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDS 388 + + + + IGI + G+D + ++ A+ A A G N + Y+ + Sbjct: 513 DVLAEPFSVQGHEVFVSGSIGISVYPRDGEDVQALLRCADIAMYRAKDSGKNDYQFYEST 572 Query: 389 LPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDG-NEEVSSAE 446 + G ++ + L R L+ +P V G + E + R + + Sbjct: 573 MSTGGLERLKLEGDLRYALKRNEFVLHYQPRVNINTGLIVGAEALIRWDLPDRGLLWPLD 632 Query: 447 YMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDT 501 ++P+ + G + R W + + ++ ++ + + Sbjct: 633 FIPLAEESGFIIPIGEWVLRTACLQCRKWQDAGVPHPRVSVNLSTHQFKKDNLTSTVDRI 692 Query: 502 LMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKEL 561 L + + +E+ E+ + +++ + ++ + LGV VA++ G S ++K Sbjct: 693 LKET-GLSPGLLELEITESAMMENLEKAVATLQGLAELGVNVAIDDFGTGYSSLGYLKRF 751 Query: 562 NVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTG 621 + LK+ VR+I ++ + S++ + +V A GV ++ + L Sbjct: 752 PIGALKIDQSFVRHIPSNIDDTAIAMSIISLGKTLNLKVVAEGVETQEQLTVLRNYQCDE 811 Query: 622 GQGDFFASSQPLDTNVKKY 640 QG F+ D + Sbjct: 812 AQGYLFSQPVDADRMTEFL 830 >UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TX60_9PROT Length = 961 Score = 704 bits (1819), Expect = 0.0, Method: Composition-based stats. Identities = 101/494 (20%), Positives = 200/494 (40%), Gaps = 17/494 (3%) Query: 154 AVRWLQRQLAGQ-ELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQ 212 A WL+ AGQ + + A R+ V + + + L ++R+I + Sbjct: 468 AQVWLRAAAAGQPQQFDWHARRLDGSLFWVEVSMRLARFSDGQNRLLV-VVRDITERKNA 526 Query: 213 HSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDT 272 RL+ A D T L NRL +++ + E+ G +M + L F ++D+ Sbjct: 527 QDRLE----FMAHHDPLTELPNRLLLQDRVDRAIALAEREGRRVALMFLDLDQFKTVNDS 582 Query: 273 WGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKA 331 GH+ + + L + +AR +F +L R +A ++ K+ Sbjct: 583 LGHAAGDRLLKDVAWRLRQCVRE--SDTIARLGGDEFVIVLNAVRDADGVVEVAEKIHKS 640 Query: 332 VDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLP 390 V + + + +GI + G D + +M+ A++A +A G +++ + + Sbjct: 641 VAPPITIEGQEVTSTLSMGIAMFPEDGHDFDTLMKKADAAMYHAKESGRSTYRFFAARMN 700 Query: 391 EKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREG-QVHHRELMCRIFDGN-EEVSSAEYM 448 ++ R+ + + L RG +LY +P V+ G V E + R VS AE++ Sbjct: 701 ADAVAHLALRSGLHRALERGEFQLYFQPQVSLTGGAVVGAEALIRWNHPERGLVSPAEFI 760 Query: 449 PMVLQFGLSEEYDRLQISRLIPLLRYWPE----ENLAIQVTVESLIRPRFQRWLRDTLMQ 504 P+ GL + + W +A+ ++ R +R +R+ L + Sbjct: 761 PVAEDSGLIVPMGDWVLRQACRQAALWQAGGHALTMAVNLSALQFRRGDLERAVREALEE 820 Query: 505 CEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVE 564 + +EL E+ + Q + + R + ALGV+++++ G S +++K V+ Sbjct: 821 -SGLAPHSLELELTESIMIQDHEAVMDMTRRLGALGVQLSIDDFGTGYSSMAYLKRFAVD 879 Query: 565 LLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 LK+ VR++ T+N + Q++++ +V A GV + L G QG Sbjct: 880 KLKIDQSFVRDVHTDTDNAAITQAIIQMAHSLKLEVIAEGVEVTEVVEFLRDHGCDLAQG 939 Query: 625 DFFASSQPLDTNVK 638 + K Sbjct: 940 FLYGRPMTAQRFEK 953 >UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodoferax ferrireducens T118 RepID=Q21R50_RHOFD Length = 1052 Score = 704 bits (1818), Expect = 0.0, Method: Composition-based stats. Identities = 99/509 (19%), Positives = 184/509 (36%), Gaps = 22/509 (4%) Query: 149 VMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQN 208 F A W G E R + + + P ++ ++ Sbjct: 550 DAAFYAAMWDSLVREGAWQGEIWNRRKNGEVFPEWLTISAVKDPAGQATHYVATFTDLST 609 Query: 209 AREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNM 268 + + I+S A D TGL NR ++L L + G ++ I L DF Sbjct: 610 RKS----AEDQIKSLAFYDTLTGLPNRRLLLDRLKQALASGARHRRQGALLYIDLDDFKT 665 Query: 269 LSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT------LKEAE 322 L++T+GH ++ + LS ++ G +AR F LL + EAE Sbjct: 666 LNNTYGHDVGDQLLQEVAQRLSHYLR--AGDTVARPGGDSFVVLLEALSTNSVEAATEAE 723 Query: 323 SIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQD--TEQVMEHAESATRNAGLQGGN 380 + ++ A+ IG+ + Q ++ ++ AE A A G N Sbjct: 724 NTGEKIRLALSQPYQIADHAHRSTASIGVTLFDDRQQEGIDEPLKRAELAMYQAKTAGRN 783 Query: 381 SWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-N 439 + +D + + + + LY + V+ E QV E + R Sbjct: 784 TLRFFDPQMQTAVMAMAALEADLREAVRSNQFLLYYQAQVSGERQVAGVEALVRWQHPVR 843 Query: 440 EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE------NLAIQVTVESLIRPR 493 V AE++P+ Q GL + + L W + +A+ V+ + Sbjct: 844 GLVPPAEFIPLAEQTGLILPLGQWVLETACAQLAAWASQPERAHLTVAVNVSALQFHQAD 903 Query: 494 FQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLV 553 F + L + + +R+ +EL E+ + + + + GV +++ G Sbjct: 904 FVAQVLAALKRA-GANPQRLKLELTESLLVHDAEDVIAKMITLKEQGVGFSLDDFGTGYS 962 Query: 554 STSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQT 613 S S++K L + LK+ G VR+I + + + +V V A GV + ++ Sbjct: 963 SLSYLKRLPLNQLKIDQGFVRDILHDANDAAIAKMVVALADTLGLSVIAEGVETEAQRDF 1022 Query: 614 LIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 L +G QG ++ + P+D Q Sbjct: 1023 LAAQGCHAYQGHLYSRALPIDAFEAFMRQ 1051 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 704 bits (1817), Expect = 0.0, Method: Composition-based stats. Identities = 85/481 (17%), Positives = 186/481 (38%), Gaps = 14/481 (2%) Query: 165 QELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYA 224 E L E G+ ++ P S T + N + + + A Sbjct: 212 SRGTEGYTVLNLERENGAQQSVELFLAPVENESGDVTHFIGVLNDVTARTHAEKRLIHQA 271 Query: 225 AQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFT 284 + D TGL NR ++++ + G VM + L F +++D++GH+ + Sbjct: 272 SHDALTGLPNRNLLNDRITHAIARSR--GRLTAVMFLDLDRFKLVNDSYGHAVGDALIRE 329 Query: 285 LTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDR 343 + N +S + G +AR +F LL ++++A +A +L + L+ Sbjct: 330 VANRVSACLR--AGDTVARLGGDEFVVLLEDLASIEDAARLAAKLRDRLSESVRIGSLEL 387 Query: 344 DDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTL 402 IG+ G+D E ++++A+ A A +G N++ Y + R + + Sbjct: 388 PLSASIGVALAPRDGRDPEMLLKNADIAMYRAKERGRNNYCFYGPEMDHHARRRLTVESE 447 Query: 403 IEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNE-EVSSAEYMPMVLQFGLSEEY 460 + + L+ G + +P V G + E + R + E++ + + GL Sbjct: 448 LRRALAGGELEAHYQPQVDLATGALTGAEALVRWRHPERCLLLPGEFIAVAEETGLIVPL 507 Query: 461 DRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIII 515 + W E +A+ ++ + + D L + + ++ + Sbjct: 508 GEQVLRAACRQSTRWREAGRPDLKVAVNLSGHQFRQHDLVEQVCDILAET-GAHAAQLEL 566 Query: 516 ELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRN 575 E+ E+ + + G+ +A++ G S S++K ++ LK+ ++ Sbjct: 567 EITESVAMADADGSVATLAGLRRQGIALAIDDFGTGYSSLSYLKRFPIDTLKIDRSFIQG 626 Query: 576 IEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDT 635 I ++ +VQ+++ + A GV + ++ + L+ +G GQG F + P + Sbjct: 627 IPADGDDTAIVQAIIAMARSLRLSLLAEGVETPAQREFLVAQGCRSGQGFLFGRAMPAED 686 Query: 636 N 636 Sbjct: 687 F 687 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 704 bits (1817), Expect = 0.0, Method: Composition-based stats. Identities = 100/501 (19%), Positives = 190/501 (37%), Gaps = 17/501 (3%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F W + AG E R + G + R T I + Sbjct: 848 FYRKMWANIKEAGSWQGELWNRR----KNGEIYPTWLAVSAVRNDQGKATHYVGISSDLS 903 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 Q + + A D T L NRL + L L ++ V+ + L F ++D Sbjct: 904 QLRQTEAEREHLAHYDPLTDLPNRLLLRSHLTHALAQAKRHHNQVGVLYLDLDRFKNIND 963 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIK 330 + G+ +E TLT L+ M LLAR +F +L H +++ +A L++ Sbjct: 964 SLGYQVGDELLVTLTERLTMHMRSE--DLLARLGGDEFLLVLEHINEPEDSAIVARSLLE 1021 Query: 331 AVDTLPNNKM-LDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDS 388 + + IGI + G EQ+++HA++A A G N++ Y + Sbjct: 1022 TLAQPFVLHGEREIFIGASIGISIFPNDGDSAEQLIQHADAAMHQAKTLGRNTYHFYTED 1081 Query: 389 LPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAE 446 L ++ + ++ R+Y +P V G + E + R D V + Sbjct: 1082 LSRASNEHLELENRLRHAITANQLRVYYQPQVDIATGHIIGAEALVRWQDPERGLVQPGQ 1141 Query: 447 YMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDT 501 ++P+ + GL + W + L A+ ++ +R + Sbjct: 1142 FIPLAEETGLIGAIGEWVLKETCLQGMRWIDAGLPFLTLAVNLSPHQFLRGNIAGLISKV 1201 Query: 502 LMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKEL 561 L + R+ +EL E+ + Q + ++ L+ A +R+A++ G S S++K Sbjct: 1202 LAET-GFPADRLELELTESALMQQGEDVIKMLHLLRAQDIRLAIDDFGTGYSSLSYLKRF 1260 Query: 562 NVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTG 621 +++LK+ V +I ++ + +++ +V A GV +R + + L RG Sbjct: 1261 PLDILKIDKSFVDDIPFHQDDMEIAATIIAMGHILGFKVLAEGVETREQLEFLQARGCDL 1320 Query: 622 GQGDFFASSQPLDTNVKKYSQ 642 QG + P + K + Sbjct: 1321 YQGYLTSPPIPAEEFEKLLKE 1341 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 703 bits (1815), Expect = 0.0, Method: Composition-based stats. Identities = 85/500 (17%), Positives = 181/500 (36%), Gaps = 16/500 (3%) Query: 151 LFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAR 210 + W G E + + ++ +I + Sbjct: 404 EVFSDMWTCLHREGAWQGELWDRKKNGEAYPKWLSISLVRDEDGQIRNHIGSFIDISELK 463 Query: 211 EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLS 270 R IR A D T L NR +LA L ++ +M+I L F ++ Sbjct: 464 ATQER----IRHLAHHDTLTNLANRFSLHEKLAQALAFCKRNRMQLALMLIDLDRFKTIN 519 Query: 271 DTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLI 329 DT GH +E + LS + ++AR +F LP + +A +A + Sbjct: 520 DTLGHQAGDELLVQVAKRLSHAVRE--SDIVARLGGDEFVIALPGIGSPADAAHLADDIT 577 Query: 330 KAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDS 388 + + K + IGIC + G + ++++A+ A +A G ++ + + Sbjct: 578 REISAPYLIKGQELRTSPSIGICVYPGDGSEIGDLLKNADVAMYHAKANGRGNYQFFTED 637 Query: 389 LPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG-NEEVSSAE 446 + + + + ++R L+ +P + R G + E + R VS A+ Sbjct: 638 MNIATTERMCLESDLRLAITRREFLLHYQPQLDLRSGTIVGVEALIRWQHPTRGLVSPAD 697 Query: 447 YMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDT 501 ++P+ + G+ + L+ W ++I ++ + + + Sbjct: 698 FIPIAEESGMIAAIGDWVLEEACRQLKVWQNRGITHLRMSINLSAGQFLDKTLPARIHEL 757 Query: 502 LMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKEL 561 L R+ +E+ E+ V++ +++ G+ ++++ G S +++K L Sbjct: 758 LA-ANDLSADRLDLEVTESMSMASPDESISVMKTLSSSGLTLSIDDFGTGYSSLAYLKLL 816 Query: 562 NVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTG 621 + LK+ V++IE + + V +V A GV + ++ + L+ G Sbjct: 817 PIHTLKIDRSFVKDIESDPNDADICDVTVLLAHKLGLEVVAEGVETEAQLKFLLSIGCEK 876 Query: 622 GQGDFFASSQPLDTNVKKYS 641 QG + P D + Sbjct: 877 VQGYLISKPLPADQAERFIR 896 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 703 bits (1815), Expect = 0.0, Method: Composition-based stats. Identities = 79/495 (15%), Positives = 185/495 (37%), Gaps = 16/495 (3%) Query: 159 QRQLAGQELLETRATRILNGE-RGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLD 217 Q G+E E E R + + + + R++ + + L+ Sbjct: 291 QVLKTGKEAREIHEHLRAGHEKRTYEIKASPLYNEDHSIRGIIETSRDLTDILNSEAELN 350 Query: 218 TLIRSYAA---QDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWG 274 + D T L N+ F ++L + ++ I L F ++D+ G Sbjct: 351 EKTQHLQFVTTHDQLTHLPNKELFFDRLERATFKTHRSPFFTALLFIDLDRFKHINDSLG 410 Query: 275 HSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVD 333 H ++ + LST + + LAR +F ++ L ++A I + Sbjct: 411 HEIGDQLLQEVAKRLSTSIRKT--DTLARMGGDEFLIIIEDIKELSHVSTVAKNFIDTIL 468 Query: 334 TLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK 392 + +GI Q ++++ AE A A GGN Y + + Sbjct: 469 PSFTIDGHELFITPSMGISIAPTDTQHPKELLAFAEIAMYQAKGLGGNKCQFYTAEMNSR 528 Query: 393 GRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPM 450 + + + + + +++ LY +P + G++ E + R +S +++P+ Sbjct: 529 AKTRIELESYLRKAVNQDQFVLYYQPQFDIQSGELVGCEALLRWQHPQMGMISPNDFIPL 588 Query: 451 VLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQC 505 + G+ E + + W + +A+ ++ P F + + Q Sbjct: 589 AEETGVIIEIGEWVLQEACLQNKKWQDAGHSPIRVAVNISPRQFREPGFLEMIERVV-QT 647 Query: 506 EKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVEL 565 + + + +E+ E+ + I +++ + A G+ +A++ G S S++K + Sbjct: 648 TGIKPEWLELEITESLLMDDIDSAINILKQLKAKGIHLAIDDFGTGYSSLSYLKRFPLSR 707 Query: 566 LKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGD 625 LK+ VR+I + + ++++ + +V A G+ ++ + L ++G GQG Sbjct: 708 LKIDRSFVRDITTDDNDASITKAVIALAHSMNLKVVAEGIETQEQLLFLKEKGCEVGQGY 767 Query: 626 FFASSQPLDTNVKKY 640 ++ + + Sbjct: 768 LYSPPVAKEPFDHFF 782 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 702 bits (1814), Expect = 0.0, Method: Composition-based stats. Identities = 105/607 (17%), Positives = 213/607 (35%), Gaps = 21/607 (3%) Query: 51 THLVSNDFSVLRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVP 110 L FS + S+ ++ ++ +Y L R + D E S Sbjct: 292 NRLDDEPFSEEDEWLC----SSHAAMAGRVYENRSLY-LQLESRARKLQLYDRAIEESSN 346 Query: 111 LIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGF---IIVMLFLAVRWLQRQLA-GQE 166 I N S+MT IG ++ LA L+R + Sbjct: 347 GIVICLADKTRDNPVIYANRAFSIMTGYSHDEIIGLSPRFLLANDLAQPGLERLRNCMRH 406 Query: 167 LLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQ 226 RA + GS + + N R + + A Sbjct: 407 GGSARAILRNYRKDGSLFWNEVALAAVHNEHGEIAHFISVFNDVTDRKRYEAALEYQANH 466 Query: 227 DVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLT 286 D TGL NR ++L + + T V+++ L F ++D GH + + Sbjct: 467 DDLTGLPNRNLLRDRLEHAITKATREHTKLAVLLLDLDQFKRVNDGLGHKIGDTLIQRVA 526 Query: 287 NLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDD 345 + +S + +AR +F L + A ++A +L++ + Sbjct: 527 SRMSQCVR--DSDTVARLGGDEFMILSTDIRDERAAATLAQKLLRQFRQKVAINGHEIIA 584 Query: 346 MIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIE 404 IGI + G + +++ +A++A A G N + Y + + R + + Sbjct: 585 SASIGIAMFPKDGDNGDELFRNADTAMYRAKDVGRNGFQFYSAEMNNRMRERLYLEQSLR 644 Query: 405 QMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDR 462 + L+ +P + G V E + R +S +++P+ + GL Sbjct: 645 NAIGLHQLSLWYQPKLDLASGSVKSAEALIRWRHPQLGMISPGDFIPIAEETGLILPIGA 704 Query: 463 LQISRLIPLLRYWPEE-----NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIEL 517 I L W ++ +AI ++ L + + L + + IE+ Sbjct: 705 WVIEEASRQLAKWRDQENQDIRVAINISAYQLSHGKLTDQVIQAL-DSLGLDPQSLTIEV 763 Query: 518 AEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIE 577 E + + + ++ + +G+RVA++ G S +++K +++LK+ V +I Sbjct: 764 TETAIMPQMDKAVCELQSLREMGIRVALDDFGTGYSSLTYLKRFPIDILKIDRSFVSDIA 823 Query: 578 KRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNV 637 E+ +V++++ + V A GV + ++ + L G QG +F P + + Sbjct: 824 DDEESGAIVKTIINLAHNLNMTVVAEGVETEAQLEFLRTNGCDEVQGYYFCKPLPSEECL 883 Query: 638 KKYSQRY 644 + R Sbjct: 884 EFLRCRR 890 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 702 bits (1814), Expect = 0.0, Method: Composition-based stats. Identities = 81/490 (16%), Positives = 183/490 (37%), Gaps = 16/490 (3%) Query: 161 QLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLI 220 Q G+ + E A + + V + + +L +I Q + + + Sbjct: 561 QQHGKWMGELLAQKRSGEYYPAWVSISTVHDNHGSLQNYVVVLTDIS----QRKQAEERL 616 Query: 221 RSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEE 280 + A D TGL NR ++ + ++ V+ I L F +++DT GH + Sbjct: 617 QFLATHDGLTGLPNRTLLQERMELAVLRAQRYQQCVGVLFIDLDRFKIINDTLGHQAGDV 676 Query: 281 QFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPNNK 339 + L + + +AR +F L+ + ++A +++ A+ Sbjct: 677 LLQEVAGRLGECLRQT--DTIARQGGDEFVVLVEDFIEQQYLVNVARKIMHALAQPFILM 734 Query: 340 MLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVR 398 + IGI + G D ++++A+ A A G N++ Y + Sbjct: 735 QQELYISASIGISVYPDDGVDISSLLKNADMAMYRAKDDGKNTFHFYSADGNANSVSRLT 794 Query: 399 WRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGL 456 + + L R L + + E + E + R VS +++P+ + G+ Sbjct: 795 LENSLRRALERNEFSLLYQAKLDLAEQNIIGAEALIRWHSAELGMVSPQDFIPVAEETGM 854 Query: 457 SEEYDRLQISRLIPLLRYWPEE-----NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRK 511 E + + +W E + + ++ + + + L + Sbjct: 855 IIEIGEWVLQQACRDACHWQEVAGRPIRVGVNISARQFREDSLYQAISNALEE-SGLTPN 913 Query: 512 RIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPG 571 + +E+ E+ + Q+ R +++ LG V ++ G S ++K ++ LK+ Sbjct: 914 CLELEITESMIMQNAERASQMLQHFRNLGSYVLIDDFGTGYSSLGYLKHFPIDSLKIDRS 973 Query: 572 LVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQ 631 VR+I + +++ + Q+++ V A GV ++++ + L +G QG F+ Sbjct: 974 FVRDIPQDSDDMAITQAIIAMAHSLKINVVAEGVETQAQLEFLRGQGCDQLQGYIFSRPL 1033 Query: 632 PLDTNVKKYS 641 ++ V Sbjct: 1034 VVEDFVGLLR 1043 >UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GA6_THICR Length = 815 Score = 701 bits (1811), Expect = 0.0, Method: Composition-based stats. Identities = 90/482 (18%), Positives = 186/482 (38%), Gaps = 22/482 (4%) Query: 172 ATRILNGERGSNVLGTIYEWPPRTSS-ALDTLLREIQNAREQHSRLDTLIRSYAAQDVKT 230 R E G + EW + + E+ + + I++ A D T Sbjct: 337 VQRNTGKEVWVQDRGDVVEWDAEENPLRMVGGFYEVTE----RKKAEEAIQNLAFYDPLT 392 Query: 231 GLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLS 290 L NR ++L + E+ +M I L DF L+DT GH ++ + L Sbjct: 393 QLPNRRLLQDRLQQEMAVTERSKHVCALMFIDLDDFKTLNDTLGHDTGDKLLRQVATRLR 452 Query: 291 TFMMRYPGALLARYHRSDFAALLPHRTLK------EAESIAGQLIKAVDTLPNNKMLDRD 344 + + +AR +F +LP AE +A ++++ ++ Sbjct: 453 ENVREF--DTVARIGGDEFVLILPSLDDDWKDAATHAELVAQKVLRVLNKPYLLDSTPYH 510 Query: 345 DMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLI 403 IG+ + Q E++++HA+ A A +G N+ YD ++ E + Sbjct: 511 STPSIGVKLFSGHQETLEELLKHADLAMYQAKAKGRNTVRFYDTTMQEVVNAKSVMEASM 570 Query: 404 EQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDR 462 Q ++ L+ +P + GQ+ E + R ++ +++P+ + G R Sbjct: 571 RQAITGQQFVLFYQPQINSNGQIIGAEALVRWRHPQKGLIAPNKFIPLAEENGFILSIGR 630 Query: 463 LQISRLIPLLRYWPEE------NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIE 516 + L W + +A+ V+ + + + Q + + + +E Sbjct: 631 WVLQTACEQLVEWARQPATAQITMAVNVSARQFHQIDLVEEVERIICQT-GANPQLLKLE 689 Query: 517 LAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNI 576 L E+ + + I + ++ + LGV +++ G S +++K L ++ LK+ VR+I Sbjct: 690 LTESLLVKDIEDVVDKMQALKKLGVSFSLDDFGTGYSSLAYLKRLPLDQLKIDQTFVRDI 749 Query: 577 EKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTN 636 + + + ++++ V A GV + + Q LI G QG F P++ Sbjct: 750 IDDSNDAAIARAVIALAKSMEFNVIAEGVENIEQHQMLIDMGCRVFQGYLFGRPVPIEEF 809 Query: 637 VK 638 + Sbjct: 810 FQ 811 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 701 bits (1810), Expect = 0.0, Method: Composition-based stats. Identities = 90/487 (18%), Positives = 186/487 (38%), Gaps = 16/487 (3%) Query: 165 QELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYA 224 + LE R +G L L+ ++ + R + A Sbjct: 1028 EHNLEFRVVHPDGSIHWVQAIGNAEYDSQGHPIRLRGLIMDVTERKTSQER----LNYMA 1083 Query: 225 AQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFT 284 D T L NRL +L ++ + T V+ I L F ++D+ GH+ + Sbjct: 1084 HHDHLTDLPNRLLLKARLDQSIQQATRKRTKLAVVFIDLDRFKHINDSMGHAAGDALLQQ 1143 Query: 285 LTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDR 343 L L + +AR +F A+L ++ A + +L+ + + Sbjct: 1144 LAQRLRQVLR--SSDTVARISGDEFVAVLEDIEDIQHASMVVAKLMTVFEEPFPLEGQII 1201 Query: 344 DDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTL 402 +G+ + G DT ++ +A+SA A +G N++ Y + + V + Sbjct: 1202 HMTSSMGLSLFPDDGMDTAILLRNADSAMYRAKEEGRNTYCFYAEEMTSAAFEYVLFENA 1261 Query: 403 IEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEY 460 + L R L +P + + E++ R VS A+++P+ Q GL +E Sbjct: 1262 LRGALKRNEFYLVYQPQIDLSSHRWVGMEVLLRWHHPELGIVSPAQFIPIAEQSGLIQEI 1321 Query: 461 DRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIII 515 + R + W ++ + A+ V + + F ++D L + + Sbjct: 1322 GTWVLYRACCQAKTWLDQGIDFGHIAVNVAAPQIQQNNFVHLVQDAL-DSSGLPSPHLEL 1380 Query: 516 ELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRN 575 EL E V + ++ +G+ +A++ G S S++K L + LK+ VR+ Sbjct: 1381 ELTEGLVMHQTEDRIKQLEVLQDMGIYLAIDDFGTGYSSLSYLKRLPINKLKIDKSFVRD 1440 Query: 576 IEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDT 635 I T + + ++++ + ++ A GV + L ++G QG ++ P + Sbjct: 1441 IPHDTNDMAISEAVIALGKALNLRIIAEGVEQEIQATFLREKGCHEAQGYLYSKPLPPEE 1500 Query: 636 NVKKYSQ 642 + +++ Sbjct: 1501 ITQLFAE 1507 >UniRef50_B9M6C9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M6C9_GEOSF Length = 845 Score = 701 bits (1810), Expect = 0.0, Method: Composition-based stats. Identities = 90/513 (17%), Positives = 199/513 (38%), Gaps = 24/513 (4%) Query: 144 IGFIIVMLFLAVRWLQRQLAGQELLETRAT--------RILNGERGSNVLGTIYEWPPRT 195 + ++ + + R + +E+ R G + + + Sbjct: 338 FVAMNMVDLVPEEQIPRIQGELKKMESMEALDKLSTNIRTKWGYSLNVEISSSPFVERNN 397 Query: 196 SSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTH 255 ++R++ ++ +++ IR A D+ TGL NR+ F + LA + + Sbjct: 398 VMGSIHIVRDVTESK----KMEDEIRYQATHDILTGLANRMLFMDHLALSISQGHRYNEI 453 Query: 256 GIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH 315 VM + L F ++D+ GH+ ++ ++ L + +AR ++ L+ Sbjct: 454 QAVMFLDLDRFKSINDSLGHAAGDKLLQLISGRLKECVRET--DTVARIGGDEYNILITQ 511 Query: 316 RT-LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRN 373 ++A +IA +++ +++ I IGI + G+D E ++++A+ A + Sbjct: 512 MAHPEDATAIANKILSSMNKPFAIDGHQLHVTISIGISLYPTDGEDAETLLKNADIALYH 571 Query: 374 AGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELM 432 A QG N++ Y+ +L + V+ + Q L R + +P V GQV E + Sbjct: 572 AKEQGRNNYQFYNPALNTRTLERVKMENRLRQALERHELVVLYQPQVAMDTGQVTGAEAL 631 Query: 433 CRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTV 486 +S ++PM + G + D + + W +E + + ++ Sbjct: 632 VYWLHPELGLLSPGHFIPMAEEIGFITDIDEWVLETACAQNKAWQDEGYRSFNVTVNMSS 691 Query: 487 ESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVN 546 + RP +R L + + +E+ E + I P + + + V A++ Sbjct: 692 KQFRRPDLVDQVRRVLNAT-GLPPRFLELEITEGTAMKDIEYTIPSLNTLTGMEVGFAID 750 Query: 547 QAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVR 606 G S S +K+L + LK+ + + ++ +V +++ +V A GV Sbjct: 751 DFGTGYSSLSCLKKLPIRKLKIDKSFIFGVNTDPNDKAIVATIIAMAHNLKLEVIAEGVE 810 Query: 607 SRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKK 639 + + L Q QG ++ P + + Sbjct: 811 DADQLEFLHQNHCDQMQGFLYSRPIPAEDFRRL 843 >UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIL1_9PROT Length = 576 Score = 701 bits (1810), Expect = 0.0, Method: Composition-based stats. Identities = 83/481 (17%), Positives = 186/481 (38%), Gaps = 16/481 (3%) Query: 169 ETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDV 228 ET +L R + L + +I R + I A D+ Sbjct: 100 ETMWNSMLKQNRMVHTFKKPICDTSGKPLYLIGMFVDITE----RHRAEQRILEMATYDI 155 Query: 229 KTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNL 288 TGL NR +++ LE + ++ I L +F +++D+ GH ++ + Sbjct: 156 LTGLPNRALLKDRIERALEHGNRNRQRVALLFIDLDNFKVINDSLGHDVGDKLLQAVAAR 215 Query: 289 LSTFMMRYPGALLARYHRSDFAALLPHRTLK-EAESIAGQLIKAVDTLPNNKMLDRDDMI 347 + + +AR +F LL + +AE++A +++ A+ + Sbjct: 216 FVSIVRGE--DTVARQGGDEFIVLLSNLESAFDAEAVAQKILNALQLHFLIDGKELHISG 273 Query: 348 HIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQM 406 IGI + G+D ++ +++ A +A G N+ + + + + + Sbjct: 274 SIGISLFPDDGEDIWTLLRNSDIAMYHAKKNGRNNCEFFKPEMNRQAKERHSMEVALRNA 333 Query: 407 LSRGGPRLYQKPAVTREG-QVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQ 464 L R L+ +P V G + E++ R + + +++ + + G+ Sbjct: 334 LKRDELLLHYQPIVNVNGGKADGFEVLLRWQHPGDGLIYPVKFIRLAEETGMIIPIGEWL 393 Query: 465 ISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAE 519 + + ++ W E+ LAI ++ + + L + + +E+ E Sbjct: 394 MRQSCLQIKAWQEQGYEVPRLAINLSAIQFRQKTLMENIVRILDET-GVTGHYLTLEITE 452 Query: 520 ADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKR 579 +++ + + +R ++ LG+ ++++ G + S++K + LK+ VR+I Sbjct: 453 SELIEDVEETIKTLRQLSELGIEISIDDFGTGYSNLSFLKRYQINTLKIDRSFVRDIPDD 512 Query: 580 TENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKK 639 ++ ++ +++ QV A GV + + L G T QG +F+ P KK Sbjct: 513 PDDTAIIDAILVMAHALGLQVIAEGVENEQQLAYLALHGCTRFQGFYFSKPLPAIEIEKK 572 Query: 640 Y 640 Sbjct: 573 M 573 >UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74BV5_GEOSL Length = 660 Score = 700 bits (1809), Expect = 0.0, Method: Composition-based stats. Identities = 94/495 (18%), Positives = 175/495 (35%), Gaps = 24/495 (4%) Query: 168 LETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQD 227 ++ R ER + + +S L + +I + + IR A D Sbjct: 169 MDHRIVLDDGVERIVSQHAELLSADDGRTSRLVGTVHDITE----RTLAEERIRYLAHHD 224 Query: 228 VKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTN 287 T L NR F+ ++ L ++ G V+ + L F ++DT GH + Sbjct: 225 TLTALPNRFQFEERMEQALAFAQRNGFMMAVLFLDLDHFKKVNDTLGHHAGDRLLQEAAG 284 Query: 288 LLSTFMMRYPGAL----------LARYHRSDFAALLPHRT-LKEAESIAGQLIKAVDTLP 336 L + R ++R +F LL ++A ++ ++I A+ Sbjct: 285 RLMKCLRRSDTLTHASREDASPFISRMGGDEFTILLTDLAHPQDAARVSQRIITALSKRY 344 Query: 337 NNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRG 395 + IGI + G+D +Q++ +A++A +A G N++ Y S+ Sbjct: 345 VIGGHEVFVGASIGISLFPSDGEDCDQLLRNADTAMYHAKELGRNTYQYYSGSMNAMALE 404 Query: 396 NVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQ 453 + + L R RL +P + G+V E + + V +++P+ + Sbjct: 405 RLTLENNLRWALKRNEFRLCYQPQLDAASGRVVGMEALLSWHRPGCDVVPPDDFIPLAEE 464 Query: 454 FGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKS 508 GL + W E L A+ ++ R +R L + Sbjct: 465 TGLIASIGEWVLWNACAQAVTWLHEGLPPVRVAVNLSSLQFRSRRLAELVRKVL-RATGL 523 Query: 509 QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKL 568 + +E+ E + VIR + +GVR +V+ G S S + ++ LK+ Sbjct: 524 PPSHLELEITEGVFMSNEEDAAVVIRDLKKMGVRFSVDDFGTGYSSLSRLSRFPLDALKI 583 Query: 569 HPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFA 628 VR+I L +++ V A GV + ++ L G QG F+ Sbjct: 584 DRSFVRDISADPAAAGLTAAIIAMARNLGLNVIAEGVETHEQFAFLRANGCAEVQGFLFS 643 Query: 629 SSQPLDTNVKKYSQR 643 D R Sbjct: 644 QPLNPDAAAAFLRAR 658 >UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39WZ5_GEOMG Length = 739 Score = 700 bits (1809), Expect = 0.0, Method: Composition-based stats. Identities = 87/495 (17%), Positives = 193/495 (38%), Gaps = 17/495 (3%) Query: 158 LQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALD-TLLREIQNAREQHSRL 216 LQR ++G L A R V G++ S++ ++ R+I Sbjct: 244 LQRVVSGDALSPMEAVFTAKDGRSVIVEGSLSCAHGGDESSVIWSICRDITE----RKHA 299 Query: 217 DTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHS 276 + + A D TGL NR+ F ++L + V+ + L F +++DT GH Sbjct: 300 EEQLYRLAHHDTLTGLPNRILFMDRLQQAKALANRYRYQVAVLFLDLDRFKIINDTLGHP 359 Query: 277 QVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIKAVDTL 335 + + + ++ + +AR +F +L + +++ + + +++K + Sbjct: 360 VGDHLLQQVAHRIAGCVREV--DTVARIGGDEFTIILVNVDTVEDVKRMGQKILKTLAAP 417 Query: 336 PNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGR 394 N + IGI + G + +Q+++ A+ A +G N+ Y + Sbjct: 418 FNIDTHELFVTASIGISLFPSDGDNLDQLVKKADIAMYCVKGEGRNNVQFYSPQMDANAD 477 Query: 395 GNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDG-NEEVSSAEYMPMVL 452 + T + + L R+Y +P V ++ E + R VS E++P+ Sbjct: 478 KRLLLETSLRKALDNREFRVYYQPKVDIVSKRITAMEALIRWDHPILGLVSPGEFIPLAE 537 Query: 453 QFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEK 507 + GL + W + + A+ ++ + +R L + Sbjct: 538 ETGLIIPIGEWVLRAACFQNCEWVRQGIPPMRVAVNLSGYQFQQKNLLETIRGILDET-G 596 Query: 508 SQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLK 567 + +E+ E+ + Q+ V+ + LGV ++++ G+ S + +K +V LK Sbjct: 597 LTADLLELEITESVIMQNPDFAVSVLNQLRDLGVHISIDDFGIGYSSLAHLKRFSVNTLK 656 Query: 568 LHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFF 627 + VR++E + + + +++ + + +V A GV + + L QG F Sbjct: 657 IDKSFVRDVEINSADAAIATAIIAMGNSLNLKVIAEGVETEGQLSFLSDNKCDEVQGYLF 716 Query: 628 ASSQPLDTNVKKYSQ 642 ++ P + + + Sbjct: 717 STPMPPEKVAEFMRE 731 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 700 bits (1809), Expect = 0.0, Method: Composition-based stats. Identities = 103/498 (20%), Positives = 199/498 (39%), Gaps = 16/498 (3%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F A W GQ E R + T + L +I +E Sbjct: 361 FYARMWDGLLGDGQWQGEVWNRRKTGEVYPQLLHITAIRDREGVLTHYAALFTDISRLKE 420 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + IR A D TGL NR D++L L ++ VM + L F ++D Sbjct: 421 ----TEARIRDLAYYDPLTGLPNRRLLDDRLQVELAHAARLRCRLAVMFVDLDRFKRIND 476 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIK 330 + GH+ ++ + L + +AR +F +L + + EA ++A +++ Sbjct: 477 SLGHAVGDKLLVEIAARLRASLR--DDDTVARMGGDEFLVVLNNLSGPDEAATMARRMVA 534 Query: 331 AVDTLPNNKMLDRDDMIHIGICAWRSG-QDTEQVMEHAESATRNAGLQGGNSWAIYDDSL 389 + N + + +G+ + +D + +++HA+ A A +G NS+ +++ ++ Sbjct: 535 ELRRPVNVEGRELVVTTSVGVAVYPDDSRDADTLVKHADVAMYRAKDEGRNSFQLFEPAM 594 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREG-QVHHRELMCRIFDGN-EEVSSAEY 447 + + T + + L R +LY +P + EG ++ E + R + VS A++ Sbjct: 595 NARSLERLALETALHRALPRDELQLYFQPVMKAEGGELVAVEALLRWRHPDLGLVSPADF 654 Query: 448 MPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTL 502 +P+ GL + R W E + + ++ F + L Sbjct: 655 IPLAEDTGLIVPIGEWVLRSACEHHRRWCEAGGAPLHMMVNISARQFREEGFAAMVGSVL 714 Query: 503 MQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELN 562 + + +EL E+ + R + + ALGV +A++ G S +++K Sbjct: 715 AET-GMTPGDLTLELTESMLMDDTDRALARLDHLRALGVCLAIDDFGTGYSSLAYLKRFP 773 Query: 563 VELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGG 622 ++ LK+ VR I++ T + LV ++V +V A GV + + L ++G Sbjct: 774 IDELKIDRLFVRGIDRNTRDAALVSAIVSLGHSLGLRVVAEGVETAAHLDVLRRQGCDLA 833 Query: 623 QGDFFASSQPLDTNVKKY 640 QG F+ P + VK Y Sbjct: 834 QGFHFSPPLPWEEFVKAY 851 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 700 bits (1808), Expect = 0.0, Method: Composition-based stats. Identities = 94/482 (19%), Positives = 180/482 (37%), Gaps = 11/482 (2%) Query: 169 ETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDV 228 E R + + G P R S T + + I A D Sbjct: 544 EWRGELLNRRKNGEVYWSITSISPLRNDSGEITHFIANVEDINERKNAEATIEHLAYFDP 603 Query: 229 KTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNL 288 T L NR ++L L + G++ +M + L F ++D+ GH + + Sbjct: 604 LTDLPNRRMLQDRLELALRRSRRHGSNVALMYLDLDSFKHVNDSMGHPAGDLLLKEMAGR 663 Query: 289 LSTFMMRYPGALLARYHRSDFAALLPHRTLK-EAESIAGQLIKAVDTLPNNKMLDRDDMI 347 S + ++ R +FA +L + IA +LI+AV + Sbjct: 664 FSGVVR--DDDVVCRLGGDEFALILHDIHQDQDVVPIAQKLIEAVAQPVPLDGREVVVTA 721 Query: 348 HIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQM 406 IGI + G D + + +HA+ A +A +G N++ Y + L + + Sbjct: 722 SIGIALFPRDGGDVKNLEKHADIALYHAKEEGKNTFRFYLEELNSTISTRIALEQGLRYA 781 Query: 407 LSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQ 464 R L+ +P V G+V E + R + VS ++P+ Q L Sbjct: 782 KERQELELHYQPKVCVASGKVSGVEALLRWHSPDFGLVSPIRFIPLAEQTRLIIPIGEWV 841 Query: 465 ISRLIPLLRYWPEENL----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEA 520 + W E+ L A+ ++ L P + + + Q + + +EL E+ Sbjct: 842 LRTACLQQVQWREQGLLLNMAVNLSAIQLKSPGLVERVAAIIDET-GIQPEHLELELTES 900 Query: 521 DVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRT 580 + + + ++ + LG ++++ G S S++K V +LK+ VR++ + Sbjct: 901 ALVNNPDEVVQLLERLRTLGCSISIDDFGTGYSSLSYLKSFPVTILKIDRSFVRDLAHNS 960 Query: 581 ENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 ++ + +S+V+ + + A GV S + L Q G T QG ++ D Sbjct: 961 GDRAIARSVVDLANNLDMKTVAEGVESEEQLTILQQIGCTYIQGFIYSRPVQADQVSAVV 1020 Query: 641 SQ 642 + Sbjct: 1021 RR 1022 >UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0D5_PELCD Length = 1141 Score = 700 bits (1807), Expect = 0.0, Method: Composition-based stats. Identities = 98/541 (18%), Positives = 215/541 (39%), Gaps = 19/541 (3%) Query: 111 LIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLET 170 + +H + + Y + + + LF+ L + L G Sbjct: 582 VYQHHRYTYVNPRFAEIFGYTPEEIVDSAPQPQLVHPDDQLFVDANNL-KILGGVNANHL 640 Query: 171 RATRILNGERGSNVLGTIYEWPP--RTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDV 228 R + + G + I AL L +I +E + I A D Sbjct: 641 RYEFVGLRKTGQPIDVEILIGRGISEGQPALIGSLLDITERKE----AEKTIEHLAFHDP 696 Query: 229 KTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNL 288 TGL NRL F +++ + + +M + L F ++D+ GHS + + Sbjct: 697 LTGLANRLLFMDRIEQAIAHAHRHHESFALMFLDLDRFKTINDSLGHSAGDAALKEVAQR 756 Query: 289 LSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIKAVDTLPNNKMLDRDDMI 347 L+T + ++R+ +F LL + +E E IA +++K++ + + Sbjct: 757 LTTCLRET--DTVSRFGGDEFNVLLSGPSHEEEIELIAHKILKSLAWPYDINDHEVFMTC 814 Query: 348 HIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQM 406 IGI ++ G++ ++++A++A A G N++ Y S+ + + + + +M Sbjct: 815 SIGIASYPKDGREAITLVKNADTALYRAKDLGRNNFQFYSSSMNARALERMAMESSLRRM 874 Query: 407 LSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGNE-EVSSAEYMPMVLQFGLSEEYDRLQ 464 R R++ +P V G++ E + R ++ + ++P+ + GL Sbjct: 875 FERQELRVHYQPQVGLQSGRITGLEGLVRWEHPVGNMIAPSVFVPLAEETGLIVPMGEWV 934 Query: 465 ISRLIPLLRYWPEENLA-----IQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAE 519 + L+ W + A I V+ L + F + L +C+ + +E+ E Sbjct: 935 LQAGCYQLKTWLDAGFAPMRLGINVSAHQLQKSDFAELVMQVLKECD-LPPHYLNLEITE 993 Query: 520 ADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKR 579 + +++ +R + A+G+ ++++ G S S++K+L + LK+ V+N+ Sbjct: 994 TVIMHNMNEAFETLRRLRAVGITISIDDFGTGFSSLSYLKDLPADHLKIDRAFVQNLPFG 1053 Query: 580 TENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKK 639 + + ++E G + +V A GV ++++ L + G QG + + + Sbjct: 1054 NNEANIARHIIEMAHGLNLKVIAEGVENQAQLDFLREAGCDEIQGFLVSRPLAAEDITEI 1113 Query: 640 Y 640 Sbjct: 1114 L 1114 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 700 bits (1807), Expect = 0.0, Method: Composition-based stats. Identities = 91/503 (18%), Positives = 192/503 (38%), Gaps = 16/503 (3%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F W AG+ E R V + + + + ++ +E Sbjct: 216 FYGKMWQTLLTAGKWQGEVWNRRKNGEIYPQWVNISAIRTGDGQTESYVGVFTDLTRIKE 275 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + + + D T L NRL F ++L L + G+ V+++ L F +++D Sbjct: 276 S----EENLLYLSGHDALTELPNRLLFHDRLNQTLVESADSGSIVAVLIVDLDRFKVIND 331 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL-KEAESIAGQLIK 330 + GH + + L A LAR +F +LP+ T ++A +A +++ Sbjct: 332 SMGHEVGDSLLCEVATRLRAIC--PAKATLARLGGDEFGIVLPNMTQNRDAALLAQEVLT 389 Query: 331 AVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSL 389 V ++ IG+ + G+ +M +AESA +A G N++ Y L Sbjct: 390 RVAQPITISEVEFAVGASIGMTVYPLDGEKPSVLMRNAESAMYHAKQSGRNNFQFYRSEL 449 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEY 447 + + + + R L+ +P + G++ E + R VS E+ Sbjct: 450 NTASLARILLESGLRNAVDRQEFLLFYQPQMELATGKLIGMEALIRWQHPEQGMVSPGEF 509 Query: 448 MPMVLQFGLSEEYDRLQISRLIPLLRYWPEE-----NLAIQVTVESLIRPRFQRWLRDTL 502 +P+ + GL + + + W ++ +++ ++ P F + T+ Sbjct: 510 IPLAEETGLVIPMGQWALKEACRQSKVWMDQTGVPLRISVNLSGIQFRLPDFTEMVMRTV 569 Query: 503 MQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELN 562 + + +EL E+ + + +++ GV +A++ G S S++K+ Sbjct: 570 GE-SGLPPHCLELELTESIAMGDVEETLEKLTILSRFGVLLAIDDFGTGFSSLSYLKKFP 628 Query: 563 VELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGG 622 ++ LK+ VRN + E+ ++++ + + +V A GV + + L Q Sbjct: 629 IDTLKIDQSFVRNCTRDPEDAAIIRAFINLAHSLNLEVIAEGVEHLEQLEFLAQESCDEI 688 Query: 623 QGDFFASSQPLDTNVKKYSQRYS 645 QG F+ D ++ Sbjct: 689 QGYFYGRPLSGDKFEMFMLDAFA 711 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 700 bits (1807), Expect = 0.0, Method: Composition-based stats. Identities = 93/495 (18%), Positives = 188/495 (37%), Gaps = 16/495 (3%) Query: 155 VRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHS 214 R Q + + + R E + + T+L ++ R Sbjct: 269 ERPNQLHRSTKAPSNSILVRRDGSELPIDESRAPILDRQGQIAGTVTVLHDVSVTRA--- 325 Query: 215 RLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWG 274 ++ + A D T L NR D++L + + G V+ + + F ++D+ G Sbjct: 326 -MELKMAHLAQHDFLTDLPNRRVLDDRLRQAISLARRQGKQLAVLFVDIDRFKHINDSLG 384 Query: 275 HSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIKAVD 333 H ++ ++ L+T + +AR +F LL T +A +A +++ AV Sbjct: 385 HGMGDKALQSMAERLTTCVR--ASDTVARQGGDEFVILLAEVTTADDAAIVAKKILSAVA 442 Query: 334 TLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK 392 + IGI D E +++HA+ A A +G N++ + + E+ Sbjct: 443 LPHRIGRHELQISASIGISTCPNDADDAETLIKHADIAMYQAKEKGRNNYQFFRADMNER 502 Query: 393 GRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPM 450 + + L R L+ +P + G + E + R V A ++ + Sbjct: 503 VLQRQSLESSLRLALERQEFLLHYQPKMNLETGHITGMEALIRWRHPELGLVPPASFIGV 562 Query: 451 VLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQC 505 GL + R + ++ W L A+ V+ R F + TL + Sbjct: 563 AEDCGLMQPIGRWVLQEACRQVKEWMVAGLNPVPVAVNVSAVEFRRKHFFDGVISTLRET 622 Query: 506 EKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVEL 565 + + + +EL E + + V+ + + GV++A++ G S S++ L V+ Sbjct: 623 D-LDPRYLELELTETVLMKEAEPTIAVLHALKSAGVKLAIDDFGTGYSSLSYLTRLPVDT 681 Query: 566 LKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGD 625 LK+ V ++ RT+N +V +++ + V A GV ++ + L GQG Sbjct: 682 LKIDRSFVTDVTTRTDNAAIVSAIIGMGKSLNLNVIAEGVETQEQLALLRSHCCAEGQGY 741 Query: 626 FFASSQPLDTNVKKY 640 +F+ + + Sbjct: 742 YFSRPVSVPAVAELL 756 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 699 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 98/502 (19%), Positives = 206/502 (41%), Gaps = 26/502 (5%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGE--RGSNVLGTIYEWPPRTSSALDTLLREIQNA 209 F LQ + G E R E + + + I + + + TL+ +I Sbjct: 412 FYDELELQLKTQGSWQGEIFNKRKNGEEYLQWTMITAVISDHEDEIINYVITLI-DITQR 470 Query: 210 REQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNML 269 + ++ I+ A D TGL NR +L + + ++ G +G ++ + L DF L Sbjct: 471 KA----AESKIKQLAFYDQLTGLPNRQLLMERLESARLNSQRNGQYGAILYLDLDDFKTL 526 Query: 270 SDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLP------HRTLKEAES 323 +DT GH ++ ++ L + R +AR +F +L K A+ Sbjct: 527 NDTRGHDTGDKFLTLVSQRLLDCVRRT--DTVARIGGDEFVIILEQLDSDLDIASKRADL 584 Query: 324 IAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQD--TEQVMEHAESATRNAGLQGGNS 381 + +++ + ++ + IG+ + G+ +++++HA+ A A G N+ Sbjct: 585 LCRKILDTLSKPYYIDNIEHFSTLSIGVTLFL-GETKGIDELLKHADLAMYQAKGAGRNT 643 Query: 382 WAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NE 440 ++ + K + I L+R LY +P VT +GQ+ E + R Sbjct: 644 HRFFNPEMQAKVLEHAAMANDIRHALTRNEFTLYYQPQVTHDGQLTGAEALIRWQHPKQG 703 Query: 441 EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPE------ENLAIQVTVESLIRPRF 494 +S E++P+ + GL + + +L W LAI ++ + + F Sbjct: 704 TISPIEFIPIAEETGLILPLGEWVLDQACQVLAVWQNSPLTDSLVLAINISAKQFHQTGF 763 Query: 495 QRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVS 554 + + + L + ++ R+ +EL E+ + + + + + GV +++ G S Sbjct: 764 VQQVLEALQRY-RANPDRLKLELTESMLHEDLEDTITKMSQLKKYGVSFSLDDFGTGYSS 822 Query: 555 TSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTL 614 +++K L ++ LK+ VR++ + + + +++V + V A GV ++ + L Sbjct: 823 LNYLKRLPLDQLKIDKSFVRDLLTNSHDADIARTIVSLAKSMNLAVIAEGVETQEQRLAL 882 Query: 615 IQRGVTGGQGDFFASSQPLDTN 636 G QG F+ PL+ Sbjct: 883 ASYGCLDFQGYLFSRPVPLEAF 904 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 699 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 84/483 (17%), Positives = 189/483 (39%), Gaps = 12/483 (2%) Query: 169 ETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDV 228 E +N +R + P T L I + + I A D Sbjct: 228 EYMVECRINTQRNDVIWTESKINPIMDEEGNVTKLLLITRDVTDRKQSEETIHHLAYHDA 287 Query: 229 KTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNL 288 T L NR + QL+ + ++ + V+ + L F ++D++GH + + Sbjct: 288 LTDLPNRRMYVQQLSKEMMQAKRFQSSLAVLFLDLDRFKDVNDSFGHDVGDMLLIEASKR 347 Query: 289 LSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMI 347 L + PG ++AR +F + EA +A Q++ + + Sbjct: 348 LQACLK--PGDVVARLGGDEFTIMQNQLLDRNEATELAEQIMYQLQRPFELDGHVFNVSC 405 Query: 348 HIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQM 406 IGI + G + E +++ A++A +G N + +D S+ K + + + Sbjct: 406 SIGIALYPQDGDNPEDLLKRADTALYTVKSRGKNGYDFFDPSMEAKSLERILMENEMRKA 465 Query: 407 LSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQ 464 + + ++Y +P + + E + R + ++P+ + G+ Sbjct: 466 IEQEQFQIYYQPKIDIATSAMTGMEALVRWVHPELGIIPPNRFIPIAEETGMILALGEWI 525 Query: 465 ISRLIPLLRYWPEEN----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEA 520 + + + W ++ +++ ++ + + ++D L + K + +E+ E+ Sbjct: 526 LKQACKQNKNWHDQGYTLKVSVNLSARQIYQKDLVEMIKDILQET-KLSPHWLELEITES 584 Query: 521 DVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRT 580 + + V++ + +G++++++ G S S+IK L V+ +K+ +R+I Sbjct: 585 IFVK-MEEATAVLQQIRDIGIQISIDDFGTGYSSFSYIKSLPVDTIKIDASFIRDIHHNQ 643 Query: 581 ENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 E+Q +V+++V + V A G+ + L + G GQG F+ P D + Sbjct: 644 ESQAIVKAIVTIAQSLNMNVIAEGIELHDQVAALKENGCDHGQGYLFSKPLPTDDFDQLL 703 Query: 641 SQR 643 Q Sbjct: 704 RQE 706 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 699 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 87/498 (17%), Positives = 188/498 (37%), Gaps = 14/498 (2%) Query: 154 AVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQH 213 + +++ LA E A + G+ +Y P + T + N Sbjct: 536 GIAAIRQALAANR--EVSAVLRNYRKDGALFWNQLYIAPVPDADGQTTHHIAVINDVTAL 593 Query: 214 SRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTW 273 R + A D T L NR ++L L ++ V+ I L F ++D+ Sbjct: 594 IRYQEQLEYQANYDSLTRLPNRNLLRDRLQHALIVAQRHHKGVAVVFIDLDGFKNVNDSL 653 Query: 274 GHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAV 332 GHS + + + L+ +AR+ +F ++ + + ++ ++ Sbjct: 654 GHSVGDRLLSVVADRLARCAR--ASDTVARHGGDEFVIVMTDTVDEQSLIAWMERVRASI 711 Query: 333 DTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPE 391 + +G + G D E +M+ A+ A A G N++ Y + Sbjct: 712 SEPVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADLAMYRAKDMGRNTFQFYQPEMNV 771 Query: 392 KGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMP 449 + + + L L+ +P V GQV E + R D + ++++P Sbjct: 772 SAGARLNLERRLRRALRDNEFLLHYQPQVDIETGQVVGMEALVRWHDPEVGLIPPSQFIP 831 Query: 450 MVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQ 504 + + GL + + W +E L ++ ++ + + + L + Sbjct: 832 VAEESGLIGPLSEWVLREACRQNKAWQDEGLPPARVSVNLSARQFQQRDIAKLVMQVLEE 891 Query: 505 CEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVE 564 + + +EL E+ + ++ ++ ++ALG+ +A++ G S S++K V+ Sbjct: 892 T-GLDPQYLELELTESTIMRNAEEAVSMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVD 950 Query: 565 LLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 LK+ V +I + ++++ + +++ + QV A GV + ++ L +R QG Sbjct: 951 RLKIDRSFVSDIGESSDDETITSAIIALAHSLNLQVIAEGVETSTQLDFLKERACDEMQG 1010 Query: 625 DFFASSQPLDTNVKKYSQ 642 FFA P + Sbjct: 1011 YFFAKPLPHHAIPGMLQR 1028 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 699 bits (1805), Expect = 0.0, Method: Composition-based stats. Identities = 88/444 (19%), Positives = 172/444 (38%), Gaps = 11/444 (2%) Query: 206 IQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPD 265 I + + I+ A D TGL NR ++ L ++ G +M + L Sbjct: 593 ITRDITEKKLAEAQIQQLAHFDQLTGLPNRSQLHDRFRYALSLAQRHGDQLAIMFLDLDH 652 Query: 266 FNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIA 325 F ++DT GHS ++ ++ L + L+R +F LLP +A +A Sbjct: 653 FKNINDTLGHSVGDQLLVDVSRRLKAALREE--DSLSRLGGDEFILLLPGTDEAQASQVA 710 Query: 326 GQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAI 384 +L+ AV + + + IGI + GQD E + ++A++A N + Sbjct: 711 TKLLAAVAQPCQIEQNELVSTVSIGIALYPNDGQDFETLSKNADAAMYRVKQASRNDFRF 770 Query: 385 YDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEV 442 + + ++ + L R L+ +P V +G + E + R + Sbjct: 771 FTQEMQTHSARTLQLVNALRHALPRHEFELHFQPQVALQDGHIVGAEALLRWRHPELGMI 830 Query: 443 SSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRW 497 S AE++P+ G + + L+ W + L A+ ++ P Sbjct: 831 SPAEFIPIAEDSGQILAIGEWVLRTAVRQLKQWLDAGLRPMVIAVNLSAVQFRHPNLMAL 890 Query: 498 LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 + L + + + +EL EA ++ ++ G+R++++ G S S+ Sbjct: 891 VTRILDEAA-LPPEFLELELTEAAAMDDPPAAIAIMNKLDEHGIRMSIDDFGTGYSSLSY 949 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 +K+ V LK+ VR+I +++ +V +++ S A GV + S+ L + Sbjct: 950 LKKFKVNKLKIDQSFVRDISDDPDDKAIVTAIINLASSLGMHTIAEGVETASQLAFLRLQ 1009 Query: 618 GVTGGQGDFFASSQPLDTNVKKYS 641 G QG + + P D Sbjct: 1010 GCDEVQGYYVSKPLPKDQFEAFVR 1033 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 699 bits (1805), Expect = 0.0, Method: Composition-based stats. Identities = 87/505 (17%), Positives = 189/505 (37%), Gaps = 21/505 (4%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F W G+ E R +L + + + R+I + Sbjct: 516 FYQSMWEGLNEKGKWEGEVWNRRKDGEIYPEYLLISAVKDIKNEVANYVATFRDITANKA 575 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 ++ I+ A D T L NR ++L L + G ++ I L +F L+D Sbjct: 576 ----AESEIKKLAFYDPLTLLPNRRLLTDRLNHALASSARNRNIGALLFIDLDNFKTLND 631 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT------LKEAESIA 325 T GH + + L + + LAR +F +L + + +AE I Sbjct: 632 TLGHDMGDALLKQVALRLKSCIRE--DDTLARLGGDEFVVILENLSELAMDAATKAELIG 689 Query: 326 GQLIKAVDTLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAI 384 +++ A++ + + IG+ + +++M+ A+ A + G N+ Sbjct: 690 EKILAALNQVYPLASQEYHGAASIGVTLFAGHALSIDELMKQADIAMYQSKKSGRNTLRF 749 Query: 385 YDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NEEVS 443 +D + + + + + L+ + + G E + R +S Sbjct: 750 FDLDTQKIINERAELEIELRKAVDKKQLHLHYQIQLNSVGTPLSAEALIRWVHPVRGLIS 809 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN------LAIQVTVESLIRPRFQRW 497 A ++P+ GL + + L W +E LA+ V+ + + F Sbjct: 810 PAHFIPLAEDTGLILPIGQWVLDTACAQLHSWQDERFTQDLTLAVNVSAKQFHQKNFVAL 869 Query: 498 LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 +++T+ + K + +EL E+ + ++I + + + +G++ +++ G S + Sbjct: 870 VKETVQR-HAINPKLLKLELTESMLVENIEDIIVTMNALREMGIQFSLDDFGTGYSSLQY 928 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 +K L + LK+ VR + + ++ +V+++V + V A GV + + L Sbjct: 929 LKRLPLNQLKIDQSFVRELSSSSSDRAIVRTIVAMAESLNLNVIAEGVETEEQHTLLQDI 988 Query: 618 GVTGGQGDFFASSQPLDTNVKKYSQ 642 G QG F P++ ++ Sbjct: 989 GCNYYQGYLFGKPMPIEQLDAILAR 1013 >UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAC3_SULNB Length = 813 Score = 699 bits (1805), Expect = 0.0, Method: Composition-based stats. Identities = 87/476 (18%), Positives = 192/476 (40%), Gaps = 17/476 (3%) Query: 178 GERGSNVLGTIYEWPP--RTSSALDTLLREIQNAREQHSRLDTL---IRSYAAQDVKTGL 232 G L + P + T++R+I + ++ L + A D TGL Sbjct: 336 RADGEKFLAEVTLTPIMLGKRHVIYTVVRDISDKKKAQQELLKQKDILHHQAHHDALTGL 395 Query: 233 NNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTF 292 NR F ++L L+ E+ + I L +F ++D+ GH ++ ++ L Sbjct: 396 PNRTLFSDRLEHGLKLAERHLGKLALFFIDLDNFKQINDSLGHQIGDKVLVVVSKRLKAK 455 Query: 293 MMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGI 351 + + LAR +F ++ + + +++ +A ++ K ++ + + IGI Sbjct: 456 IRQE--DTLARLGGDEFTIIMENFKDVQQVSVLAQKIQKVLNQPMHIEGHTLYISCSIGI 513 Query: 352 CAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRG 410 + Q+ ++++A++A A +G N++ Y + V + Q + Sbjct: 514 SFYPQDTQNANDLVKYADAAMYKAKEEGRNNFQFYSTEMTTLAYERVVMEASLRQAIKNE 573 Query: 411 GPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRL 468 LY +P V ++ E + R + + +++P+ + GL E DR + Sbjct: 574 EFILYYQPQVNAQTSRMTGMEALIRWEHPHLGMILPDKFIPLAEESGLILEIDRWVMRTA 633 Query: 469 IPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVG 523 + +R W L ++ +++ L F +++ L + + + E+ E + Sbjct: 634 MKQVREWYARGLDPGVLSLNLSMRQLKDENFIDVIKEYLHMMS-FEPEWLEFEVTEGQMM 692 Query: 524 QHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQ 583 + + + ++G+ +A++ G S ++K L V LK+ + I + EN Sbjct: 693 KRPDDAVASLGEIKSMGISIAIDDFGTGYSSLGYLKRLPVSRLKIDQSFIHGIPEDRENA 752 Query: 584 LLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKK 639 +V++ + S + A GV + + + L+ G QG ++ D KK Sbjct: 753 AIVKATIALAKSLSLSIIAEGVENEEQKEFLLFNGCISMQGYYYGRPMTADQIEKK 808 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 699 bits (1805), Expect = 0.0, Method: Composition-based stats. Identities = 84/469 (17%), Positives = 176/469 (37%), Gaps = 17/469 (3%) Query: 178 GERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLF 237 G + +G + E + + +L +H R + + A D T L NR Sbjct: 169 GAFDAEEIGLLEELANNLAHGILSL-----RIMAEHKRYEEQLAYQATHDPLTALPNRNL 223 Query: 238 FDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYP 297 ++++ L ++ V+ + L F ++D+ GH + ++ + LS + + Sbjct: 224 LADRISQALAWAQRHRRWIAVLFVDLDFFKFVNDSLGHGKGDQLLKMVAERLSERVRQV- 282 Query: 298 GALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR- 355 LA F +L +EA+ + +A+ + IGI + Sbjct: 283 -DTLAHQGGDKFVVVLTDLRGNEEADRAVHVIREAISLPFLMDGQELVISCSIGITVYPK 341 Query: 356 SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLY 415 G+D + ++++AE A A QG N + Y L E+ + + + L L+ Sbjct: 342 DGEDAQTLVKNAEVAMYRAKEQGRNCFRYYTRELNERVASRMSMEKHLRKALENEEFELW 401 Query: 416 QKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLR 473 +P G++ E + R + V ++P+ + GL + + R Sbjct: 402 YQPQADLNTGRLSGMEGLIRWRNAELGMVQPGSFIPLAEETGLIVQIGEWVVRTACLQNR 461 Query: 474 YWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISR 528 W + L A+ ++ + L + + + +E+ E+ V + Sbjct: 462 RWQDAGLSPLTVAVNLSPRQFRDRELTGVIAGVLRET-GLDPRYLGLEIVESMVMHDVES 520 Query: 529 LQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQS 588 ++ + ALGV+++++ G S S++K LK+ VR+I + + +S Sbjct: 521 AAAMLNELKALGVKLSMDDFGTGYSSLSYLKRFPFAKLKIDLSFVRDIMTDPGSAAIAKS 580 Query: 589 LVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNV 637 ++ + V A GV + + + L G QG + + P Sbjct: 581 IISMAHNLNLSVVAEGVETEGQLEFLRAHGCNEIQGYYLSRPLPAAEFE 629 >UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E9L8_GEOLS Length = 631 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 97/509 (19%), Positives = 194/509 (38%), Gaps = 19/509 (3%) Query: 144 IGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLL 203 + +I L++ L Q +E +++GT + S + L Sbjct: 119 LRSLICGHDQEECILEQILTTQRRVEQNDFLHDGRH--YHLVGTPLKNHDGAISRVVLLY 176 Query: 204 REIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRL 263 +I R I A D TGL NR+ ++LA LL + ++ I L Sbjct: 177 TDITERRA----AAEEIERLAFFDSLTGLPNRVLLKDRLAQLLTRAGRYNEMVAILFIDL 232 Query: 264 PDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE-AE 322 F ++DT GH ++ ++ L+ + +AR +F LLP T ++ Sbjct: 233 DRFKEVNDTLGHGTGDQLLQVVSERLTACLR--SCDTVARLGGDEFVVLLPGITERDCVG 290 Query: 323 SIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNS 381 IA +L++++ + IGI W G + ++A++A +A QG N+ Sbjct: 291 DIAAKLLQSLCKPVQLDAREVFTSGSIGISLWPIDGDSVSTLFKNADTAMYHAKEQGRNT 350 Query: 382 WAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN- 439 + Y + + + L RG L +P V+ G + E + R Sbjct: 351 YRFYTPQMHATSMEQLTLSNDLRYALERGELHLCYQPQVSFETGGLIGVEALLRWIHPKL 410 Query: 440 EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRF 494 + ++P+ GL + W + L A+ ++ + F Sbjct: 411 GMIPPDRFIPLAEDTGLIVPIGTWVLHEACRQAMMWVAQGLPSLRVAVNISAKQFRESDF 470 Query: 495 QRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVS 554 ++ L Q + +EL E + +++++ + ++ + +GV +A++ G S Sbjct: 471 SDTVKAVL-QTTGLAPNLLELELTEGMLIENVTQTKLTLQSLKDMGVTLAIDDFGTGYSS 529 Query: 555 TSWIKELNVELLKLHPGLVRNIEKRTEN-QLLVQSLVEACSGTSTQVYATGVRSRSEWQT 613 S++K ++ LK+ V+ I +++ + +V+++V V A GV + + Sbjct: 530 LSYLKHFPLDRLKIDKSFVKEIAEKSGDAAAIVEAVVALGHSLKLTVIAEGVEQQDQVDF 589 Query: 614 LIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 L R QG FF+ + + Sbjct: 590 LHNRKCDELQGYFFSRPLTPQALEELLRK 618 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 698 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 86/511 (16%), Positives = 186/511 (36%), Gaps = 15/511 (2%) Query: 139 PLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSA 198 P + FLA + AG E R + T ++ Sbjct: 332 PARLFASGLHENDFLATVAAEVDRAGLWRGEIWGERREGPPYSGEMTVTAVRTRAGETTH 391 Query: 199 LDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIV 258 + +I R + IR A D+ T L NR ++L + ++ G V Sbjct: 392 YVAAITDITK----RKRDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCV 447 Query: 259 MMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL 318 M + L F ++D++GHS +E L + + R +F +L + Sbjct: 448 MFLDLDRFKQINDSYGHSAGDEVLKLTARRLRNCVR--ISDSVGRLGGDEFIVILSNVED 505 Query: 319 KEA-ESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGL 376 + A IA +++ ++ + + +GI + G+ ++ +A+ A +A Sbjct: 506 QHAGAYIAEKILYSLSEPFPIGGTEVFCIPSVGITYFPDHGETAPDLLRNADVAMYHAKQ 565 Query: 377 QGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIF 436 G +AI+ + + + + + L+R L+ +P V + + E + R Sbjct: 566 GGERRYAIFTPDMARRSLALLTMESDLRHALARDEFELHFQPKVRADLTLIGAEALIRWR 625 Query: 437 DGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLI 490 ++ +++P+ + GL R + + W E L ++ V+ Sbjct: 626 HPEKGLINPGDFIPLAEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQ 685 Query: 491 RPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGL 550 +R L++ + + + +E+ E + + +R + LGV ++++ G Sbjct: 686 DQTLVETVRQILVET-GLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGT 744 Query: 551 TLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSE 610 S +++K ++ LK+ VR++ ++ +V +++ V A GV + Sbjct: 745 GYSSLNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQ 804 Query: 611 WQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 + L R QG ++ P Sbjct: 805 AEFLGSRDCQNFQGFLYSRPLPPAEFTTFLR 835 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 698 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 98/483 (20%), Positives = 195/483 (40%), Gaps = 12/483 (2%) Query: 170 TRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVK 229 + + GS P R + T ++ Q + + A D Sbjct: 319 WQGELCNRAKDGSLFWEYATISPIRDDDGVVTHFMAVKENITQRKETEQQLVHQATHDTL 378 Query: 230 TGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLL 289 TGL NRL ++++ +E ++ G +M + L F +++D+ GH +E +++ L Sbjct: 379 TGLPNRLLLEDRVHHAIEVAKREGRRIGLMFLDLDRFKIVNDSLGHVAGDELLKVVSDRL 438 Query: 290 STFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIH 348 + R +AR +F +L H ++ E +A ++ A+D Sbjct: 439 RHTLRR--SDTVARLGGDEFVVVLTHFQSTTELAEVAEKISAALDEPVELSGHKVHVGAS 496 Query: 349 IGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQML 407 IGI + G + +M+ A++A A +G N++ YD ++ ++ ++ + + L Sbjct: 497 IGIAIYPDDGDNFNALMKDADTAMYRAKQKGRNTFCFYDSNMNDEALDRLKLEEALRRAL 556 Query: 408 SRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQI 465 RG +L+ +P V G+ E + R +VS A ++P+ + L + Sbjct: 557 VRGEFQLFYQPQVDLQTGRTSGVEALIRWNSPERGQVSPALFIPVAEESNLISMIGWWVL 616 Query: 466 SRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEA 520 + W E L A+ V+ + + D + Q ++ IEL E+ Sbjct: 617 EESCRQIAAWREAGLTGIKVAVNVSGRQFLNHALVECISDLMAQYAVL-PSQLEIELTES 675 Query: 521 DVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRT 580 V R + + +G++V+V+ G S S++K L + +K+ VR++ ++ Sbjct: 676 TVMAEPDRAIEQLTRLREIGIQVSVDDFGTGYSSLSYLKRLPLSTIKVDRSFVRDVNNQS 735 Query: 581 ENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 +N +V +++ + A GV + E Q L G QG +A P D Sbjct: 736 DNAAIVSAILGLADALDMSIVAEGVETEGEEQHLKDAGCIKVQGFRYAKPMPADQLAAWM 795 Query: 641 SQR 643 ++ Sbjct: 796 LRQ 798 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 698 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 79/487 (16%), Positives = 187/487 (38%), Gaps = 17/487 (3%) Query: 167 LLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQ 226 + E R R + + T + ++++I +E + IR A Sbjct: 199 VCEKRYIRKDGSVFWAQLSSTWFFDANGNPLYTVPVIQDITRRKE----AEERIRELAYY 254 Query: 227 DVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLT 286 D TGL NR F+++L ++ + + +M + L F ++DT GH+ + Sbjct: 255 DSLTGLANRTLFNDRLDQVMARSRRRQSRFALMFLDLDRFKGVNDTLGHAVGDAMLRQAA 314 Query: 287 NLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPNNKMLDRDD 345 L+ + +AR +F +L + +A +++KA+ + + + + Sbjct: 315 ERLNECLRE--NDTVARLGGDEFVIILSDYKEDANLPRVADKILKALSSPFDLGVREVYS 372 Query: 346 MIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIE 404 +GI + G + ++ HA+ A A GG+++ Y + + + + Sbjct: 373 STSVGIAIYPDDGDEATDLLRHADMAMYAAKESGGDTFRFYSSEMNARAVSRMDMEANLR 432 Query: 405 QMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDR 462 + L + + +P + +V E + R + +++ + + L Sbjct: 433 RALEQEEFFIEYQPQIDLITNKVAGVEALLRWQHPQLGVIPPTQFIGLAEETNLILPLGE 492 Query: 463 LQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIEL 517 + R+ W +E + I V+ ++P F + L + + + + E+ Sbjct: 493 WVMRRVFEQCVMWKQEGYLPFRVGINVSGRQFVQPDFVDMVCRLLDET-GAAPELLEFEI 551 Query: 518 AEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIE 577 E+ V + + + + LG+ +A++ G S S +K L + LK+ + +++ Sbjct: 552 TESVVMKDVDAAVLTLEALKKLGINMAIDDFGTGYSSLSCLKHLPLNRLKIDKSFISDLQ 611 Query: 578 KRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNV 637 +++ +V++ + V A GV + ++ + +R QG +F+ Sbjct: 612 DNADDRAIVEATIAMAKRLELGVTAEGVETEGQYGFVQKRECDEVQGFYFSRPLSPSEVA 671 Query: 638 -KKYSQR 643 +R Sbjct: 672 DAWLIKR 678 >UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Y8_9PROT Length = 812 Score = 697 bits (1801), Expect = 0.0, Method: Composition-based stats. Identities = 89/509 (17%), Positives = 184/509 (36%), Gaps = 22/509 (4%) Query: 149 VMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQN 208 F W G E R +I +I Sbjct: 305 DNEFYRHMWQAILNEGHWQGEIWDKRKTGEIYAKLAHISILRRSDGGVYRHVAQFSDITE 364 Query: 209 AREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNM 268 +++ D LI A D T L NR +++LA L ++ G +M + L F Sbjct: 365 KKQK----DELIFWQANYDALTCLPNRRLLNDRLAHALAANKRNEDCGALMFLDLDKFKT 420 Query: 269 LSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK------EAE 322 L+DT GH+ + + + + + +AR +F LL + A Sbjct: 421 LNDTLGHAYGDMLLVEVARRIKSCVREV--DTVARIGGDEFVVLLENLGADIKDATQAAA 478 Query: 323 SIAGQLIKAVDTLPNNKMLDRDDMIHIGICA-WRSGQDTEQVMEHAESATRNAGLQGGNS 381 IA ++ ++ T IG+ +G+ E++++ A+ A A G N+ Sbjct: 479 HIAEKIRASLSTPYQLHDKMHHSSPSIGVSLIHCNGESAEELIKQADMAMYQAKEAGRNA 538 Query: 382 WAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NE 440 +D + + + + + +L+ + + E + R Sbjct: 539 VRFFDPQMQQSVETIAALESDLRHAVHERQLQLFYQIQLDHTHHPVGAEALLRWIHPVRG 598 Query: 441 EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW------PEENLAIQVTVESLIRPRF 494 VS A+++P + L + + + W + LA+ ++ +P F Sbjct: 599 MVSPAQFIPFAEESSLILDIGHWVLDEACRQIAAWSHQERTRDLVLAVNISARQFKQPDF 658 Query: 495 QRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVN-ALGVRVAVNQAGLTLV 553 + + + Q R+ +EL E+ + + + + + LG+ ++++ G Sbjct: 659 VEQVGAMIRK-HAIQPARLKLELTESIALEELDVIITKMHALRNGLGISLSLDDFGTGYS 717 Query: 554 STSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQT 613 S S++K L ++ +K+ VR++ + + ++V+++++ +V A GV + ++ Sbjct: 718 SLSYLKRLPLDQIKIDQSFVRDMTVDSGDAVMVKTIIDMAHNFGIEVIAEGVETAGQFFL 777 Query: 614 LIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 L Q G QG F PL Q Sbjct: 778 LKQYGCLLFQGYLFGRPVPLREFEALLQQ 806 >UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUG6_METML Length = 836 Score = 697 bits (1801), Expect = 0.0, Method: Composition-based stats. Identities = 92/502 (18%), Positives = 188/502 (37%), Gaps = 21/502 (4%) Query: 149 VMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQN 208 LF W + G E R + + + + ++ +I Sbjct: 337 DQLFYQALWDRVNTTGTWCGEIWNRRKNGDIYPERITISEVKDKDGKVTNYVSVFTDISE 396 Query: 209 AREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNM 268 ++ I A D T L NRL +++ + G G ++ + L F + Sbjct: 397 SKASS----EQIEHLAFYDPLTNLPNRLLLLDRVRQAFSSSSRTGKKGALLFVDLDHFKV 452 Query: 269 LSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT--LKEAESIAG 326 L+DT GHS + LS + G +AR+ +F +L EA +IA Sbjct: 453 LNDTLGHSTGDLLLKLQAERLSHCVR--AGDTVARFGGDEFVVVLEDLDRNATEAAAIAE 510 Query: 327 ----QLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNS 381 +++ + IGI + + E +++ A+ + A G N+ Sbjct: 511 QIGNKILSTLHEPCQFGTHQYQSTSSIGITLFSGDEHEIEDLLKQADISMYQAKKAGRNT 570 Query: 382 WAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-E 440 +D ++ EK + + + + LY + V ++ E + R Sbjct: 571 LRFFDPAMQEKLSVRASLESELRYAIEKQQLALYYQVQVDDNQRMVGAEALIRWIHPERG 630 Query: 441 EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW------PEENLAIQVTVESLIRPRF 494 VS E++P+ + L + I+ L W +A+ V+ F Sbjct: 631 TVSPIEFIPIAEESALILDVGHWVINTACMQLAEWAKSVEKKHLMIAVNVSAHQFRALDF 690 Query: 495 QRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVS 554 + + + K R+ +EL E+ + + + + + + ALGV+++++ G S Sbjct: 691 VQSTQQAI-DLHKIDASRLKLELTESVILEDVDDVIAKMHALKALGVKLSLDDFGTGYSS 749 Query: 555 TSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTL 614 S++K+L ++ +K+ VR++ + ++V+++++ + V A GV + E L Sbjct: 750 LSYLKKLPLDQVKIDQSFVRDLAYDPNDAIMVKTIIDLANNFRINVIAEGVETELELDIL 809 Query: 615 IQRGVTGGQGDFFASSQPLDTN 636 G QG F P++ Sbjct: 810 KGYGCRLYQGYLFGRPVPIEQL 831 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 697 bits (1800), Expect = 0.0, Method: Composition-based stats. Identities = 81/486 (16%), Positives = 183/486 (37%), Gaps = 12/486 (2%) Query: 169 ETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDV 228 E + + G ++ +++ + I +H + + I A D Sbjct: 372 EWKEAFSSRKKHGELFWTSLSLSAIKSNEGFISHYLAIMEDITEHKQAEERIHYLAYYDS 431 Query: 229 KTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNL 288 T L NR F ++L + + V I + F ++DT GHS + + + Sbjct: 432 LTALPNRELFHDRLNMAIIHAHRKQQMLAVAFIDIDRFKKVNDTLGHSTGDRLLKIIADR 491 Query: 289 LSTFMMRYPGALLARYHRSDFAALLPHRTL-KEAESIAGQLIKAVDTLPNNKMLDRDDMI 347 L + + ++R +F LL + ++A + +++K + D Sbjct: 492 LKSCIREE--DTVSRQGGDEFVLLLTEISRMEDANDVTQRILKKLKEPVIIDDHDLCISA 549 Query: 348 HIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQM 406 IGI + G E ++++A+SA + G +++ Y ++ EK + + + Sbjct: 550 SIGIALYPGDGTTAEALLKNADSAMYISKESGRDNYHFYSSTVQEKAYEQLLEEMYLRRA 609 Query: 407 LSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQ 464 L LY +P V G++ E + R +S AE++P+ G D Sbjct: 610 LENRELVLYYQPQVNIATGRLVGMEALLRWKHPKKGLISPAEFIPLAEDTGQIVPIDFWV 669 Query: 465 ISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAE 519 + W L A+ ++ + R ++ + L + + +E+ E Sbjct: 670 LHTACKQNMAWQRAGLPSVPIAVNISGHTFGRENLIDFVNNVLHDT-RMSPDALDLEITE 728 Query: 520 ADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKR 579 Q++ + + +LG+++ ++ G S S++ + ++ LK+ + N+ K Sbjct: 729 GIAIQNLQTTIYKLNKLKSLGIQITIDDFGTGFSSLSYLSKFPIQKLKIGMTFIHNLHKD 788 Query: 580 TENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKK 639 N +V++++ V A GV + +++ L QG + + + + Sbjct: 789 PTNSAIVKAVIAMAKSLQLTVIAEGVETDEQFEFLQGLQCDEFQGYLCSKAVTSEEMGRF 848 Query: 640 YSQRYS 645 ++ Sbjct: 849 LAKNAG 854 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 697 bits (1800), Expect = 0.0, Method: Composition-based stats. Identities = 95/500 (19%), Positives = 192/500 (38%), Gaps = 15/500 (3%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F + W + G E R + + + S ++ +I + Sbjct: 837 FYSAMWDSIGVMGYWQGEVINQRKNGEIYTQWLSISTIKDADGKISQHIGIISDISERKV 896 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + I+ + D T L N+ +++ L +++ T +M + L F +++ Sbjct: 897 ----AEERIQFLSNFDPLTNLPNKNLLNDRTKLALATAKRLKTAVTLMFVDLDRFKFINE 952 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKA 331 + G S ++ L +M P + R +F LLP+ + A +A +L+ Sbjct: 953 SLGPSIGDQVVKELAERFVAYMR--PEDTVCRQGGDEFILLLPNTDAEGAAHVAKKLLDI 1010 Query: 332 VDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLP 390 V N IGI A+ G+ EQ+ + A++A A +G N++ + + Sbjct: 1011 VAQPFNFHGQKIVLTASIGISAYPQDGESFEQLAQSADAALYRAKYEGRNNFQFFARQMH 1070 Query: 391 EKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYM 448 E+ + + + + LY +P + ++ E + R VS A ++ Sbjct: 1071 EQAHDILLLESELRSAIEHEEFLLYYQPQYDSKTSKIIGLEALIRWQHPEKGLVSPAVFI 1130 Query: 449 PMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLM 503 P+ + GL E + + L W E L A+ ++V + + L Sbjct: 1131 PIAEESGLIAEIGDWVLRTAVKQLASWQEAGLGAVPVAVNLSVVQFHQDTLYGSVCQILR 1190 Query: 504 QCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNV 563 K + +EL E + R V+ +N+LGVR++++ G S S++K+ + Sbjct: 1191 DT-KVDPSMLELELTEGIAMEDSERTLNVLNQLNSLGVRLSIDDFGTGYSSLSYLKKFKI 1249 Query: 564 ELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQ 623 + LK+ VR I ++ ++ +++ S + A GV + + LI Q Sbjct: 1250 DKLKIDQSFVRGIGSHPQDAAIITAIISMAKSLSFKTIAEGVETLEQLNFLIANSCDEIQ 1309 Query: 624 GDFFASSQPLDTNVKKYSQR 643 G +F+ P K + + Sbjct: 1310 GYYFSKPLPSTEVTKLLANQ 1329 >UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY75_PSYIN Length = 591 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 89/487 (18%), Positives = 194/487 (39%), Gaps = 17/487 (3%) Query: 170 TRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVK 229 +A R + + L + + ++ L + +++ ++ ++L + A D Sbjct: 104 EKAKRAVELAIANKELAFQSKEKAKRAAELAIVNQDLTFQSKEKAKLAEELNDLAFYDTL 163 Query: 230 TGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLL 289 TGL NR ++L L + G VM I L F ++DT GH + L Sbjct: 164 TGLPNRRLLIDRLHHALASNVRQGCESAVMFIDLDHFKDINDTLGHEVGDLLLIQTAQRL 223 Query: 290 STFMMRYPGALLARYHRSDFAALLPHRT------LKEAESIAGQLIKAVDTLPNNKMLDR 343 + + + G +AR +F +L + +A++IA +++ ++ M Sbjct: 224 ESCLRK--GDTVARLGGDEFMLILENLDENPIEAATKAKAIADKILAELNKPYQLDMHKC 281 Query: 344 DDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTL 402 + IG + G E +++ A+ A A GGN ++ + E + Sbjct: 282 HSTVSIGAVFFDHQGNTAEDLIKQADIAMYQAKQAGGNLIRFFNPKMQESINARITLENE 341 Query: 403 IEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYD 461 + + + LY + + + +V E + R + V A ++P+ + GL Sbjct: 342 LRIAIEKSQFHLYYQIQMDSDNRVLGAEALIRWTNPEHGLVLPATFIPIAEETGLILSIG 401 Query: 462 RLQISRLIPLLRYWP------EENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIII 515 + I ++ W + LA+ V+ + + F ++ + + + + Sbjct: 402 KWVIETACAQIKVWQKKSQTRDLTLAVNVSAKQFRQKDFVDQVQSAVQR-HAIPGNLLKL 460 Query: 516 ELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRN 575 EL E+ + +++ +N +GV+ +++ G S ++K L ++ K+ VR+ Sbjct: 461 ELTESLLQYDTEVTIAMMKALNKIGVQFSLDDFGTGYSSLQYLKRLPLDQFKIDQSFVRD 520 Query: 576 IEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDT 635 I ++ +V++++ V A GV + + Q L+ +G T QG F+ P+D Sbjct: 521 IATDNNDKAIVKAIIAMAQILDIDVIAEGVETEEQQQLLLGKGCTLYQGYLFSKPIPIDQ 580 Query: 636 NVKKYSQ 642 + Sbjct: 581 FDALIGR 587 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 87/501 (17%), Positives = 175/501 (34%), Gaps = 16/501 (3%) Query: 150 MLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNA 209 F W +G E + R V T + TL +I Sbjct: 531 ATFFDAMWTSIVESGSWAGEVWSRRSDGDRYPQWVTITAVRDTDGRIAEYVTLFSDITER 590 Query: 210 REQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNML 269 ++Q + + A D TGL NR ++L L + G ++ + L F + Sbjct: 591 KQQ----EVAMWRQANFDPLTGLANRSLLQDRLDRALAHARRHGCKVGLLFLDLDGFKWI 646 Query: 270 SDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQL 328 +D+ GH +E + L++ + +AR +F ++ + +IA +L Sbjct: 647 NDSLGHDVGDELLVDVARRLNSCVR--DEDTVARLGGDEFTVVVHDLADRADLGAIADKL 704 Query: 329 IKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDD 387 + + + +GI + G D + ++ +A+ A A G N Y Sbjct: 705 VAVLREPFALRGARHHISGSVGITVFPDDGDDVQTLLRNADIAMYKAKQAGKNRAQPYAP 764 Query: 388 SLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSA 445 + V + + + L+ +P V G + E + R +S Sbjct: 765 HMQADALARVHLEADLRMAVEQRAFELHYQPIVDCASGALVGAEALIRWKHPERGMISPL 824 Query: 446 EYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRD 500 E++P+ + GL + ++ R W L + V+ +R Sbjct: 825 EFIPVAEECGLIVPIGEWVLREVVRQRRDWLARGHPPLRLTLNVSGVQFREAGLPELVRT 884 Query: 501 TLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKE 560 L + + R ++ E+ E+ + ++ + + G+ A++ G S S++K Sbjct: 885 LLAEF-GTARSSLVFEITESVLMGGSENVEARMCDIKEQGICFALDDFGTGFSSLSYLKR 943 Query: 561 LNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVT 620 V+++K+ VR+ + LV++++ +V A GV S + + L G Sbjct: 944 FPVDIVKIDRSFVRDCPDDRNDATLVEAIINMAHSLGLRVTAEGVESAEQREFLRALGCD 1003 Query: 621 GGQGDFFASSQPLDTNVKKYS 641 QG D + Sbjct: 1004 YLQGYLIGKPLAADAFEALMA 1024 >UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6N3_NITMU Length = 1025 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 98/533 (18%), Positives = 217/533 (40%), Gaps = 17/533 (3%) Query: 116 GMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAV-RWLQRQLAGQELLETRATR 174 G+ + + ++ + + + +IV F R+ + + + A Sbjct: 474 GVGWQKDWIGRQISFTYENSQNRFVLASHQSVIVEDFQTETRFKPSSILKSHNIRSCADV 533 Query: 175 ILNGERGSN-VLGTIYEWPPRTSSALDTLLREIQNAREQ---HSRLDTLIRSYAAQDVKT 230 +++G G +LG P R +S+ L+ + N + + A D T Sbjct: 534 LISGAGGPYGILGAYSPEPQRFTSSSINFLQSLANILATAIDRKTTEERLTYLAQFDPLT 593 Query: 231 GLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLS 290 L NR F ++L +E + V+ L F +++DT GHS +E + L Sbjct: 594 ELPNRSLFLDRLRQAMEHAHRNRRRVGVVFADLDRFKIVNDTMGHSTGDELLIHVAKRLQ 653 Query: 291 TFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHI 349 + +AR +FA +L ++A IA ++I A+ + + + Sbjct: 654 QCVR--SCDTVARLGGDEFALILSDLVQPEDATLIAEKVISALQVPFELETQEIYVSASL 711 Query: 350 GICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLS 408 GI + G D + ++ +A++A A QG + Y + E+ ++ T + L+ Sbjct: 712 GISIYPGDGTDADSLLRNADTAMFQAKEQGPAIYQFYLPQMNERAVARLKIETQLRGALA 771 Query: 409 RGGPRLYQKPAVTR-EGQVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQIS 466 R L+ +P + G++ E + R + V +++ ++ GL + Sbjct: 772 RREFVLHYQPKASLINGEITGFEALLRWQHPAHGLVPPLQFISVLEDTGLIVAVGEWVVK 831 Query: 467 RLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEAD 521 + +R W + L AI ++ + + +TL + + EL E+ Sbjct: 832 TVCEQIREWQGQGLVLHPIAINLSARQFQQQDLDSIIGETLRATN-IDPRLLEFELTESV 890 Query: 522 VGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTE 581 + + ++ + A GV+++++ G S +++K +++LK+ +R++ + Sbjct: 891 LMKEAEMAANALQNLKAFGVQISMDDFGTGYSSLAYLKRFPLDVLKIDRAFIRDVTTDPD 950 Query: 582 NQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLD 634 + + ++++ +V A GV +R++ + LI+ G QG +F+ PL+ Sbjct: 951 DATITVAMIKLAHSLGLKVVAEGVETRAQLEFLIRHGCDEMQGYYFSQPLPLE 1003 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 101/499 (20%), Positives = 198/499 (39%), Gaps = 17/499 (3%) Query: 155 VRWLQRQLAGQELLET-RATRILNGERGSNVLGT-IYEWPPRTSSALDTLLREIQNAREQ 212 W Q A L + R R + G I ++ L + ++ + +E Sbjct: 526 EHWQQEPHAPDRLETSFRVCPPGGRMRWVHARGQYIAAAEDTAAARLVGTVNDVTDQKEN 585 Query: 213 HSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDT 272 + I YA D TGL NR +L + + V+ + L F ++DT Sbjct: 586 ----EEQIERYAHFDALTGLANRHALYRRLGQAITSVHQHQHPLAVLFVDLDKFKTINDT 641 Query: 273 WGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAV 332 GH+ + + LS F P +LAR +F +LP + A +A ++ A+ Sbjct: 642 LGHAVGDVVLREVAGRLSDF--AGPDDILARLGGDEFLLVLPGADERAASEVAACILTAM 699 Query: 333 DTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPE 391 + IG+ + G++ + ++ +A+ A A +G N++ +Y + Sbjct: 700 SVPVRVDGRELPTTPTIGVSLYPRDGEEADDLIRNADIAMYQAKARGRNTFQLYTPDMNA 759 Query: 392 KGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFDGN-EEVSSAEYMP 449 ++ + + RG L+ +P + G V E + R VS ++P Sbjct: 760 AAAERLQLQGELRNAHLRGEIMLHYQPQIDVTDGHVVGCEALMRWKHPTLGMVSPGRFIP 819 Query: 450 MVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQ 504 + + GL I W L A+ ++ + F + D L Sbjct: 820 LAEESGLIITLGNWAIREACRQAMVWQRAGLPPLTVAVNLSGCQFQQSNFTAVVADALAD 879 Query: 505 CEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVE 564 + + +EL E+ V + ++ + + ALGV+++++ G S +++K V+ Sbjct: 880 TS-LPPQYLELELTESIVMHDVEQVIATLTELKALGVQLSIDDFGTGYSSLNYLKRFPVD 938 Query: 565 LLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 LLK+ G VR++E + +V++++ + ++ A GV ++ + L GV QG Sbjct: 939 LLKIDQGFVRDVETDPSDAAIVRAIIALGKILNLRLIAEGVETQGQLDYLHAAGVDFIQG 998 Query: 625 DFFASSQPLDTNVKKYSQR 643 +F+ P + +QR Sbjct: 999 YYFSRPLPAEDMATYLAQR 1017 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 695 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 102/630 (16%), Positives = 213/630 (33%), Gaps = 33/630 (5%) Query: 26 CSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFSVLRPQITELMMSADIVRVDLLHGDKQ 85 LS A Y V + AI V L +A I + + Sbjct: 429 AHLSKRRAHAYVGHRLVDSRGQAIGQLFV--------LFSRPLHETAFITSTLQIFASRV 480 Query: 86 VYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIG 145 L R + + + + I G+ + Y + + + Sbjct: 481 AAELERQSADAHIRRQASLLDKAQDAIMVRGLDDAIRYWNKGAERLYGWKADEVTGRSTE 540 Query: 146 FIIVMLFLAVRWLQRQL--AGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLL 203 ++ A R R++ + E R T+ A+ + Sbjct: 541 MLLYGDPTAFRENTRKVIAHSEWNGEITQLRKDGTALVVEAHWTLLRDENDQPDAILAIN 600 Query: 204 REIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRL 263 + + + + A D TGL NR ++L ++ + G G +++I L Sbjct: 601 TNVTERKA----AEHKVHQLAFYDPLTGLPNRELLGDRLQHAMQV--RHGQVGALLLIDL 654 Query: 264 PDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE--- 320 +F L+DT GH+ + + L T + + G LAR +F +L + Sbjct: 655 DNFKTLNDTLGHAMGDLLLQQIAQRLQTCLRK--GDTLARVGGDEFVIVLEGLSASPGDA 712 Query: 321 ---AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGL 376 A + +++ + IGI + +++ + A+ A A Sbjct: 713 GSLATRVGEKILASFARPFQLADYVHHCTASIGITLFNDRPTTLDELRKRADLAMYQAKA 772 Query: 377 QGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIF 436 G N+ +D ++ + + L G L+ + V G V E + R Sbjct: 773 HGRNALRFFDPAMQAVVAARAELEVDLREALRLGAFELHYQAQVDARGCVSGAEALLRWQ 832 Query: 437 DGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP------EENLAIQVTVESL 489 ++ A ++P+ + GL + L W +LA+ V+ Sbjct: 833 HPQRGWIAPASFIPLAEETGLILPLGLWVLDVACAQLVAWSKMPHMARLSLAVNVSARQF 892 Query: 490 IRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAG 549 + F + + + + +R+ +EL E+ + ++ + + A G+ +++ G Sbjct: 893 RQADFAAQVLAAI-ERSGADPRRLKLELTESLMLDNLDDTILKMSALKAHGIGFSLDDFG 951 Query: 550 LTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRS 609 S +++K L ++ +K+ VR++ + + +S++ + +V A GV + + Sbjct: 952 TGYSSLAYLKRLPLDEIKIDQSFVRDVLIDANDASIARSILALGQSLNLEVVAEGVETDA 1011 Query: 610 EWQTLIQRGVTGGQGDFFASSQPLDTNVKK 639 + L + G QG F QP Sbjct: 1012 QHAFLAEHGCQAYQGYLFNRPQPARQFEAW 1041 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 695 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 85/489 (17%), Positives = 188/489 (38%), Gaps = 16/489 (3%) Query: 164 GQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSY 223 G E ++ R T++ + + + +I R + I+ Sbjct: 186 GVESYDSTMIHTDGSIRDIIFSKTVFGNTDGSIGGIVGTILDITE----RKRAEEAIQQL 241 Query: 224 AAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFF 283 A D TGL NR ++++ LL + G V+ + + F ++D+ GH+ + Sbjct: 242 AYFDALTGLPNRTLLRDRVSQLLSQARREGGGFGVLHLDVDRFKGVNDSLGHACGDVLLS 301 Query: 284 TLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIKAVDTLPNNKMLD 342 T+ +++ + +AR +F +LP ++ ++ ++++ ++ + D Sbjct: 302 TVAGRIASSIRE--SDTVARLGSDEFVVILPGVGHEEDVVAVVRKIVEELNRPIVIQGND 359 Query: 343 RDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRT 401 IGI + G + ++++A+ A A GG+ + Y L + + T Sbjct: 360 IFCTASIGIAIYPTDGSSADILLKNADMAMHKAKEFGGDGYQFYSSELNHRAMERLTLET 419 Query: 402 LIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEE 459 + + L R L+ +P + G++ E + R VS A ++P+ + GL Sbjct: 420 SLRRALERREFLLHYQPLLGIGSGRIVGVEALLRWDSPELGMVSPARFIPLAEETGLIVP 479 Query: 460 YDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRII 514 + LR E +++ V+ F + + + + Sbjct: 480 IGEWVLRSACEQLRALHELGYTELCVSVNVSARQFRHDGFCAMVAAV-LAAVGLDPRYLE 538 Query: 515 IELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVR 574 +EL E+ + + + ++R + +GV +A++ G S S++K ++ LK+ V+ Sbjct: 539 LELTESVIMERSETAKGILRKLKQMGVSLAIDDFGTGYSSLSYLKHFPIDRLKIDRTFVK 598 Query: 575 NIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLD 634 + +N + +++V + V A GV + + L QG A P Sbjct: 599 EVTVDQDNAAIAEAIVALAHVLNLDVVAEGVETAEQLAFLAALRCDVVQGYHIARPLPPR 658 Query: 635 TNVKKYSQR 643 ++ R Sbjct: 659 NLLEFLEAR 667 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 695 bits (1794), Expect = 0.0, Method: Composition-based stats. Identities = 91/502 (18%), Positives = 186/502 (37%), Gaps = 19/502 (3%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F W + AG E R + + + +I + Sbjct: 457 FYLSMWAALKEAGHWQGELWNRRKNGELFPEWLTLNAVRNEVGHVTHYVGVFTDISKLK- 515 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + + + A D T L NRL ++L L+ ++ G VM + L F ++D Sbjct: 516 ---QTEDRLDYLAHHDPLTDLPNRLLVLSRLEHALDGAQRRGCRVAVMFLDLDRFKTVND 572 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIK 330 + GH+ +E + L + L R +F LL H +A +A L++ Sbjct: 573 SLGHAAGDELLRAVAARLRGALREE--DTLGRLGGDEFMVLLEHVEAPADAAVVAKNLVE 630 Query: 331 AVDTLPNN-KMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDS 388 + + IGI + G D ++ +A++A A QG N++ Y + Sbjct: 631 VLAAPFALSNGHEVFIRASIGISFYPDDGDDFMTLVRNADAAMYRAKAQGRNTYGFYTED 690 Query: 389 LPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNE--EVSSA 445 L + T + + L +Y +P + ++G++ E + R VS A Sbjct: 691 LIRSATERLALETRLRRALEHDEFVVYYQPVLGVKDGRLLGAEALVRWK-PQGEPMVSPA 749 Query: 446 EYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRD 500 ++P+ + GL + +R W + +A+ ++ E R L Sbjct: 750 AFIPVAEETGLIVALGEWVLRDACRQVREWIDAGYAFGQVAVNLSAEQFRRQDVSAMLAT 809 Query: 501 TLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKE 560 L + ++ +E+ E+ + + ++ + GV +A++ G S +++K Sbjct: 810 VLAET-GLPATQLELEITESSLLEAGEHAVGLLERLKQQGVGLAIDDFGTGYSSLAYLKR 868 Query: 561 LNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVT 620 +++ LK+ V++I + + + ++V V A GV ++ + L G Sbjct: 869 FSIDKLKIDRSFVQDIADDSNDLAIASAIVAMARALDMAVQAEGVEGEAQLELLRGLGCG 928 Query: 621 GGQGDFFASSQPLDTNVKKYSQ 642 QG + P D ++ + Sbjct: 929 SYQGYLCSPPLPADEFEARFLR 950 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 695 bits (1794), Expect = 0.0, Method: Composition-based stats. Identities = 86/440 (19%), Positives = 179/440 (40%), Gaps = 12/440 (2%) Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 R++++IR A D T L NRL FD QLA L + ++ V + L F +++D Sbjct: 423 AQKRVESIIRYQACHDALTHLPNRLLFDEQLALALANSKQQPELLGVAFLDLDRFKVVND 482 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIK 330 T GH ++ + L + +AR+ +F L PH + E IA +++ Sbjct: 483 TLGHGIGDQLLQQVATRLKQCLRNC--DTIARWGGDEFTLLFPHLTSTDEITKIAHRILD 540 Query: 331 AVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSL 389 + + +GI +D + +++HA++A A QG N++ ++ + + Sbjct: 541 KLSIPFVIDNQELYVTASLGIALCPYDAEDAQTLLKHADAAMYRAKKQGRNNFQVFAEEM 600 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEY 447 + + + + L + LY +P V G++ E + R V ++ Sbjct: 601 HREALNQLTLEADLRRALIKEEFLLYYQPQVEISTGKIVGLEALIRWQHPTLGFVPPDQF 660 Query: 448 MPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTL 502 +P+ + GL + + + W E L A+ ++ + + + TL Sbjct: 661 IPLAEEIGLIAPIGQWVLQTACIQHQSWQAEGLPPVRIAVNLSARQFHQSQLINIILQTL 720 Query: 503 MQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELN 562 + + + + +E+ E+ Q + ++ + +G+ + ++ G S + +K Sbjct: 721 -ETTEIDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITIDDFGTGYSSLNVLKHFP 779 Query: 563 VELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGG 622 + LK+ V++I + + + + Q++V G +V A GV + + L Sbjct: 780 LNTLKIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGVETPQQLSFLRSIHCDLA 839 Query: 623 QGDFFASSQPLDTNVKKYSQ 642 QG +F P K Q Sbjct: 840 QGYYFCPPVPAIEIAKLLRQ 859 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 695 bits (1794), Expect = 0.0, Method: Composition-based stats. Identities = 92/493 (18%), Positives = 181/493 (36%), Gaps = 19/493 (3%) Query: 165 QELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYA 224 + + + G + R + T H IR A Sbjct: 518 ERNGVWQGEIWNRRKNGDVFPEWLTISSVRDGDGVVTHYVSALTDMSAHKAAQEEIRHLA 577 Query: 225 AQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFT 284 D TGL NR ++L + + G ++ I L +F L+DT GH + Sbjct: 578 FYDALTGLPNRRLLHDRLRVAIASSVRSERQGALLFIDLDNFKTLNDTLGHDMGDRLLQQ 637 Query: 285 LTNLLSTFMMRYPGALLARYHRSDFAALLPHRT--LKEAE----SIAGQLIKAVDTLPNN 338 + LS+ + G +AR +F +L + +EA + ++IK ++ + Sbjct: 638 VGQRLSSSVRE--GDTVARLGGDEFVVMLENLGERPEEAAGQSRIVGEKIIKLLNRPYDL 695 Query: 339 KMLDRDDMIHIGICAWRSGQDT--EQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGN 396 D + +GI + GQ +++M+ A+ A A G N+ +D + Sbjct: 696 SGHDYHNTPSVGITLF-GGQQVGIDELMKRADLAMYEAKASGRNALRFFDPRMQAVVTAR 754 Query: 397 VRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFG 455 + + R L +P V GQV E + R VS AE++P+ + G Sbjct: 755 ADIEKDLRAAVGRQSFFLAYQPQVDASGQVIGAEALLRWQHQQRGTVSPAEFIPVAEETG 814 Query: 456 LSEEYDRLQISRLIPLLRYW------PEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQ 509 L + W +++ V+ + F + L + + Sbjct: 815 LILPLGLWVLETACAQAALWAARPGRERFTVSVNVSARQFRQANFVDQVLAVLAR-SGAH 873 Query: 510 RKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLH 569 + + +EL E+ + ++ + + + A GV +++ G S S++K+L ++ LK+ Sbjct: 874 PRNLKLELTESMLLDNVQDIIAKMSALKARGVGFSLDDFGTGYSSLSYLKQLPLDQLKID 933 Query: 570 PGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFAS 629 VR++ ++++ ++++ V A GV S + L +G QG F+ Sbjct: 934 QSFVRDLLTDPNDEVIARTIIALARTLGLSVIAEGVESVEQQDALAAQGCLAYQGYLFSR 993 Query: 630 SQPLDTNVKKYSQ 642 L + Sbjct: 994 PLALADFEAFLRR 1006 >UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q478F7_DECAR Length = 739 Score = 695 bits (1794), Expect = 0.0, Method: Composition-based stats. Identities = 89/508 (17%), Positives = 184/508 (36%), Gaps = 22/508 (4%) Query: 148 IVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQ 207 F A W G E R + + + + +I Sbjct: 219 QDADFYAAMWCSLGQCGHWQGEIWNRRKNGEIFPEWLTISGVRDGRGKVTHYVSTFSDIS 278 Query: 208 NAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFN 267 N + ++ I A D T + NR N+L ++ G G +++I + F Sbjct: 279 NLKV----AESEIHHLAFYDPLTAMPNRRLLLNRLDQACVSAKRSGQFGALLIIDIDHFK 334 Query: 268 MLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE------A 321 L+DT GH + + LS + G AR +F +L ++ A Sbjct: 335 TLNDTLGHDVGDHLLVEVARRLSACIRE--GDTAARQGGDEFVVMLEELGSEQEGAAVQA 392 Query: 322 ESIAGQLIKAVDTLPNNKM-LDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGG 379 E +A ++ + + IGI + + + +++ A+ A A G Sbjct: 393 EIVAEKIRLELARPYLLNGDTEYFRSASIGISLFFGQEKTIDILLKQADIALYKAKDAGR 452 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN 439 N+ +D ++ + + L R LY +P V ++ E + R Sbjct: 453 NAIRFFDTAMQTTLDERAELEAGLRRALVRDEFVLYVQPQVDAVRRLIGAEALLRWQPPG 512 Query: 440 E-EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN------LAIQVTVESLIRP 492 V+ +++P+ + GL + + LR W ++ L++ V+ + Sbjct: 513 RAMVAPNDFIPLAEETGLIVPIGIWVLDQACAELRRWADDPRSASLFLSVNVSARQFRQA 572 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 F + D L + + + + +EL E+ + ++ + ++ + +GVR +++ G Sbjct: 573 DFVAQVADALAR-HGANPRLLKLELTESLLLDNVEEVIEKMQALRTIGVRFSLDDFGTGY 631 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S S++K E LK+ +R+I ++ +V++++ + V A GV + Sbjct: 632 ASLSYLKRFPFEQLKVDRSFIRDININPDDAAIVRAIIAMGNTLRLSVVAEGVEDDLQHA 691 Query: 613 TLIQRGVTGGQGDFFASSQPLDTNVKKY 640 L++ + QG F D Sbjct: 692 YLVKHECSLFQGYLFGRPMSFDDFRASL 719 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 694 bits (1793), Expect = 0.0, Method: Composition-based stats. Identities = 106/587 (18%), Positives = 219/587 (37%), Gaps = 25/587 (4%) Query: 74 IVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHS 133 + + + +V N + ++ + ++ I P + L L + + + Sbjct: 282 LYEMRVRDQGLEVQV---NERTAEILATQRQLQATLGAIPDPLLELGLDGRCYNAHSSRT 338 Query: 134 LMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETR-------ATRILNGERGSNVLG 186 P IG I+ L A QE E + NG + Sbjct: 339 DSLPWPTEDLIGRTIMELLPPQACQIVLAALQEAKEKECSIGKQIKVPLDNGMHWFEMSV 398 Query: 187 TIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLL 246 T P L R+I ++ + + I+ A D TGL NR+ ++ L Sbjct: 399 TRKSALPGEEPLFLVLCRDITESK----QAERKIQLLAHFDSLTGLPNRVLLTDRCNLAL 454 Query: 247 EDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHR 306 ++ GT ++++ L F ++D+ GH +E L L + + R Sbjct: 455 SAAQRNGTPLALLLLDLDHFKNVNDSLGHRVGDEVLIALAGRLKGAVREQ--DTVCRLGG 512 Query: 307 SDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVME 365 +F +LP A IA L+++ + + IGI + G D + + Sbjct: 513 DEFILVLPETNAAGAAHIAEMLLQSALVAFELEPHELTVTPSIGIALFPGDGSDFDTLSR 572 Query: 366 HAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REG 424 A++A A G N++ + + + + + + L R +L+ +P ++ G Sbjct: 573 CADAAMYRAKKDGRNNYRFFTAEMQARSERTLTLENALRRALERNQLQLHYQPQISLASG 632 Query: 425 QVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN---- 479 +V E + R V AE++P+ GL + + L+ W + Sbjct: 633 RVVGAEALLRWSHPELGAVPPAEFIPVAETCGLILPIGEWVLRTSVQQLKAWIDAGMLPI 692 Query: 480 -LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNA 538 L++ ++ + L + + + +EL E V+ ++ Sbjct: 693 ALSVNLSSVQFRHADLPELVTSILNEAQ-LPAHLLELELTENVAMTDPLGAIAVMNNLHE 751 Query: 539 LGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTST 598 GVR++++ G S S++K+ V +K+ VR+I + ++++ +V +++ + Sbjct: 752 RGVRMSIDDFGTGYSSLSYLKKFRVYKIKIDQSFVRDITEDSDDKAIVGAIISMATSLGM 811 Query: 599 QVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYS 645 Q A GV + + + L +G T QG +F+ P++ + S Sbjct: 812 QTIAEGVETEGQLEFLKAKGCTEVQGYYFSRPLPVEQFEAFMGTKSS 858 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 694 bits (1792), Expect = 0.0, Method: Composition-based stats. Identities = 87/496 (17%), Positives = 188/496 (37%), Gaps = 16/496 (3%) Query: 157 WLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRL 216 W G+ E R N + V T + +I + SRL Sbjct: 490 WKALTREGRWRGEFWNQRKNNEQYAEWVTLTAVNNEEGKVINYVGVFADISEIKHSQSRL 549 Query: 217 DTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHS 276 + L+ D TGL NR L ++ E+ ++ + L F ++DT GH Sbjct: 550 NELVNR----DPLTGLPNRRLMHELLDHAIKYAEREQNEIALLFVDLDRFKAINDTLGHQ 605 Query: 277 QVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTL 335 ++ F ++ + + +AR +F ++ ++A +A ++I ++ Sbjct: 606 MGDKLLFEVSQRIRAAVR--DSDAVARLGGDEFIVMMDVLREREDAAKVAKKIISSLQNE 663 Query: 336 PNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGR 394 + +GI + D + +++ A+ A +G N+ Y L + Sbjct: 664 FLIDGRELFISASVGISVYPDDSLDVDGLIKAADIAMYQVKNKGKNNHCFYSADLSQNAV 723 Query: 395 GNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVL 452 + + L+R +Y + V+ G++ E + R VS A+++P+ Sbjct: 724 ERFTLENQLRRALARDQFEVYYQAQVSLETGRIIGAESLIRWIHPELGVVSPAKFIPLAE 783 Query: 453 QFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEK 507 + GL + + ++ W ++ +++ V+ + R F + L++ + Sbjct: 784 ETGLIIPIGEWVLRQSAMQVKEWHDQGFDIDWVSVNVSGVQIQRSNFADTVYGILVETD- 842 Query: 508 SQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLK 567 + + +E+ E+ V + + V + LGVR+A++ G S S +K L ++ +K Sbjct: 843 CESHLLELEITESTVMHNTEYVIDVFDRIKHLGVRLAIDDFGTGYSSLSHLKRLPLDKIK 902 Query: 568 LHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFF 627 + VR++ +++ + ++ V A GV +R + L + G GQG + Sbjct: 903 IDQSFVRDLPNNSDDAAIATAINAMAQSLGFTVIAEGVETRQQASFLKKIGCQQGQGYLY 962 Query: 628 ASSQPLDTNVKKYSQR 643 + Sbjct: 963 SRPVTASEFTALLRAE 978 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 694 bits (1792), Expect = 0.0, Method: Composition-based stats. Identities = 85/487 (17%), Positives = 179/487 (36%), Gaps = 14/487 (2%) Query: 169 ETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDV 228 E + GS + P S ++ Q + + A D Sbjct: 757 EWYGELENKRKDGSIFWESASISPLFDESGKIINFIGVKEDITQRKLNEKRLEYMATHDG 816 Query: 229 KTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNL 288 TGL NR + L L ++ V+++ L F +++D+ GH ++ + Sbjct: 817 LTGLANRTLLYDHLEIALHQSQRSKKLVAVILLDLDRFKVINDSLGHLVGDQVLKAVGQR 876 Query: 289 LSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPNNKMLDRDDMI 347 L ++ +AR +F LL R A IA L++ ++ + Sbjct: 877 LKQYVR--STDTVARLGGDEFVVLLTDVRDTTAAGKIAHNLLRKLNEPFFLHGRELYVSA 934 Query: 348 HIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQM 406 GIC D ++ +A+ A A +G + Y + E + + Q Sbjct: 935 SFGICLSETDNVDGTILLRNADIAMYKAKAEGCGLY-FYSHEMNEHLIKTLEMENSLRQA 993 Query: 407 LSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQ 464 L + +LY +P V G++ E + R + +E++P+ + GL + Sbjct: 994 LEKNEFQLYYQPKVEHATGRIIGCEALLRWRHPQRGMIPPSEFIPLAEETGLIVQIGHWV 1053 Query: 465 ISRLIPLLRYW-----PEENLAIQVTVESLIR-PRFQRWLRDTLMQCEKSQRKRIIIELA 518 ++ + W P +A+ ++ + + ++ TL + + ++ +EL Sbjct: 1054 LAEACRQSKIWETEGLPPLTMAVNISARQFYQGENLIQAVKSTLERSQLV-PSQLELELT 1112 Query: 519 EADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEK 578 E+ V + + +R + LGV ++++ G S ++++ V+ LK+ + +I Sbjct: 1113 ESMVMKDAVNAERTMRKIKQLGVSLSLDDFGTGYSSLNYLRSFPVDSLKIDRSFILDIAS 1172 Query: 579 RTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVK 638 + ++ S++ Q A GV + + + G QG F+ P + V Sbjct: 1173 DASSAAILNSIIAIAHTLGLQTVAEGVENNDQLALVANCGCNYIQGYLFSRPLPPEDFVA 1232 Query: 639 KYSQRYS 645 + Sbjct: 1233 LFLANKG 1239 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 694 bits (1792), Expect = 0.0, Method: Composition-based stats. Identities = 95/506 (18%), Positives = 196/506 (38%), Gaps = 15/506 (2%) Query: 149 VMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQN 208 F W + G E + + + P +++ ++ +I Sbjct: 463 DGAFYRRFWRALETEGHWSGEIWNRHRDGHIFPAWQSVSAVKGPDGSTTHYVSIFTDISE 522 Query: 209 AREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNM 268 + R + IR + D TGL NR +F +L L+E + ++++ L F Sbjct: 523 FK----RAEAQIRYLSYHDDLTGLPNRAYFQARLDQLIEAAARDRKQIALVVLDLDRFKT 578 Query: 269 LSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQL 328 ++D+ GHS +E + + + G +AR +F +L A +A + Sbjct: 579 INDSLGHSVGDELLCQVAERIQDCTGQ--GDFVARQGGDEFVVILADSDAVRAARVANAM 636 Query: 329 IKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDD 387 I A+ +GI + D+E +++ A++A +A G N++ + Sbjct: 637 ISAIAKPAVAGGRTLIVTPSLGISLYPHDAGDSESLIKSADAAMYHAKSLGRNTYQFFSA 696 Query: 388 SLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSA 445 + + + Q LS G RLY +P + ++ E + R V Sbjct: 697 EMSAVATERLALENALHQALSNGEFRLYYQPQIEVCSRRLIGLEALIRWRHPEVGWVPPL 756 Query: 446 EYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRD 500 ++P+ + G+ R + R W L A+ ++ L + F + Sbjct: 757 RFIPLAEETGIIHRIGRWVLEEACRQQREWQAAGLCIVPVAVNLSPLQLQKDDFPEQVEA 816 Query: 501 TLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKE 560 L C + + +EL E V + + R+ ++R + G R +++ G S ++ Sbjct: 817 LLSGC-RLAPGLLELELTETAVMRDVGRMSDMLRKLKERGTRFSIDDFGTGYSSLGYLNR 875 Query: 561 LNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVT 620 V+ LK+ +R++ +R ++ + ++++ +V A GV + + + L + G Sbjct: 876 FPVDKLKIDQSFIRDVTRREDHAAITRAIIALAKQLHLKVVAEGVETAEQLEFLERAGCD 935 Query: 621 GGQGDFFASSQPLDTNVKKYSQRYSV 646 G QG +F+ P D S+ +V Sbjct: 936 GAQGFYFSRPVPADEIAGWLSREGAV 961 >UniRef50_A1ALB3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Desulfuromonadales RepID=A1ALB3_PELPD Length = 705 Score = 694 bits (1792), Expect = 0.0, Method: Composition-based stats. Identities = 81/482 (16%), Positives = 181/482 (37%), Gaps = 16/482 (3%) Query: 170 TRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVK 229 T GE N+ G + + + + +I + ++ I D Sbjct: 227 YHTTSRSGGELVVNIQGEVERGEDGRAWLISGTVLDITARI----KAESEIHHLINYDTL 282 Query: 230 TGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLL 289 TGL NR ++L + + V+ + L F ++DT GH ++ + L Sbjct: 283 TGLPNRSLLHDRLRQAIAQAAQDRHMVWVLCLDLDRFKGVNDTLGHRSGDKLLQEVARRL 342 Query: 290 STFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIH 348 + + LAR +F +L + K A +A +++ + + Sbjct: 343 AACVRE--SDTLARLGGDEFVVVLDGVVSEKGASIVAKKILTLIAEPIPIDDHELYTTAS 400 Query: 349 IGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQML 407 IGI A+ G+D +++HA+ A A N++ + + K + + + L Sbjct: 401 IGIAAYPMDGEDGHTLLKHADLAMYKAKELDRNNFHFFSHDMNIKVMERMMLENSMRKAL 460 Query: 408 SRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQI 465 R L +P V R G++ E + R + ++ ++ + + G + Sbjct: 461 ERDEFFLVYQPQVDARSGRITGVEALLRWNHPDMGLLTPDRFIYLAEETGFIVPLGEWVL 520 Query: 466 SRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEA 520 R W + +A+ ++ + + R + L++ + + + +E+ E+ Sbjct: 521 MTACRQNRAWQKLGFPPLRVAVNLSGKQFGQHRLDEMISAILLET-GLEPEWLELEITES 579 Query: 521 DVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRT 580 + ++ + ++R + G+ +A++ G S S++K + LK+ V++I Sbjct: 580 AIMRNADQNIAILRSLKEKGISLAIDDFGTGYSSLSYLKHFPITRLKIDKTFVQDITTNP 639 Query: 581 ENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 ++ + + ++ V A GV +R++ + L QG F+ D V Sbjct: 640 DDAAIAEIIIAMAQTLKLNVIAEGVETRAQMEFLSTHTCFEMQGYLFSRPLTTDKFVYLL 699 Query: 641 SQ 642 Sbjct: 700 RD 701 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 94/492 (19%), Positives = 198/492 (40%), Gaps = 18/492 (3%) Query: 163 AGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDT--LLREIQNAREQHSRLDTLI 220 +G+ R G + +V TI R + + ++R+I +E R I Sbjct: 220 SGRRADHFETVRWGKGRKPIDVSVTISAMKDRAGNIIGASKIVRDITQRKESQER----I 275 Query: 221 RSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEE 280 A D TGL NR ++L +E+ + ++ + + F +++D+ GH ++ Sbjct: 276 EYLAHYDSLTGLPNRTLLSDRLRIAIENARRYSIRLALLFVDIDRFKLVNDSLGHEIGDK 335 Query: 281 QFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNK 339 + + + + + ++R +F LL T +A A +LI ++ + Sbjct: 336 LLKAVAQRMQSTVRQ--ADTVSRVGGDEFVVLLSRIETATDAARSAEKLITSISQPYQIE 393 Query: 340 MLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVR 398 + IGI + G+D + +A++A +A QG N + Y + L +R Sbjct: 394 EHELLLTASIGISIYPDNGKDASSLTRNADAAMYSAKGQGRNRYQFYSEDLTYAAAERLR 453 Query: 399 WRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFD-GNEEVSSAEYMPMVLQFGL 456 + LSR +P + G+V E + R G +S A ++P+ GL Sbjct: 454 LEHDLRGALSRDEIFPLYQPQIELATGRVIGVEALMRWNRAGQGLISPASFIPVAEDSGL 513 Query: 457 SEEYDRLQISRLIPLLRYWPEE-----NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRK 511 + + R W E +A+ V+ + F + L + + Sbjct: 514 ILALGEYILRKACLQARQWHEHQGFQGTIAVNVSAVQFRQNDFTDVVLRVLSET-GFPPE 572 Query: 512 RIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPG 571 + +E+ E+ V Q + + + ++ + G+++A++ G S S++++ ++ LK+ Sbjct: 573 CLELEVTESVVMQGLESVVQKMGILESHGIKLAIDDFGTGYSSLSYLRQFAIDRLKIDQS 632 Query: 572 LVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQ 631 VR++ + Q +++++V +V A GV + ++ + L T QG +A Sbjct: 633 FVRDLPGDADAQAIIRAIVAMGRSLGLRVMAEGVETEAQARFLQDIECTESQGYLYARPM 692 Query: 632 PLDTNVKKYSQR 643 + R Sbjct: 693 KSNDFEAWLKTR 704 >UniRef50_B8GQW3 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GQW3_THISH Length = 926 Score = 692 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 112/629 (17%), Positives = 230/629 (36%), Gaps = 32/629 (5%) Query: 40 HRVQAVATAIDTHLVSNDFSVLRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVG 99 + +++D SN+ S + + +++ SA + + + + + Sbjct: 303 RQAGPTPSSVDYRYRSNEASWV--WLRDIVSSASDSDGHAVLRGLTLDVSPQRQAALALK 360 Query: 100 SSDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAV---- 155 S+ + + + + N +T + ++G + A Sbjct: 361 DSESRYREVIEHVSEVIFRTDHQGRWTLLNPAWEELTGYSIAESLGRPVSEFVSAEDSPL 420 Query: 156 --RWLQRQLAGQELL---ETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAR 210 + L G + E R R +V + A L +I Sbjct: 421 LEALTNQLLHGNKSQLRDELRLLTRAGEPRWVSVFVRSSQDAEGRVIATFGTLTDITE-- 478 Query: 211 EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLS 270 R + IR A D T L NR ++L + + HG ++ + L +F ++ Sbjct: 479 --RKRAEEEIRRLAFYDSLTELPNRSLLYDRLRLAMASAARSRHHGAILFLDLDNFKDIN 536 Query: 271 DTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK------EAESI 324 DT GH +E + + + + LAR +F +L + EAE++ Sbjct: 537 DTLGHDVGDELLRQVASRMQGTIRET--DTLARLGGDEFVIILNDLHPEQAQAAVEAETL 594 Query: 325 AGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWA 383 +L+ + +R IG + G+ + +++++ A+ A A G N+ Sbjct: 595 GSKLLHLLAEPFRLGEHERHCTPSIGATLFGDGEVNVDELLKQADLAMYRAKDSGRNTLC 654 Query: 384 IYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEV 442 ++ + + + + L L+ +P V +G + E + R V Sbjct: 655 FFEPEMHQVVKARAALEADFRKALREDQLHLHYQPHVDDQGHILGAEALLRWSHPERGMV 714 Query: 443 SSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE------NLAIQVTVESLIRPRFQR 496 E++ + Q GL + R + L W E N+A+ V+ + P F R Sbjct: 715 PPMEFIAVAEQTGLIIKLGRWVLQTACQQLALWHRESQWMRINMAVNVSAKQFRHPDFVR 774 Query: 497 WLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTS 556 + + L Q + + +++EL E+ + + + + + LGV A++ G S S Sbjct: 775 EVAEIL-QSTGAPAQHLVLELTESLLLEDTETVITRMNALRELGVGFALDDFGTGYSSLS 833 Query: 557 WIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQ 616 ++K L + LLK+ VR+I + + + ++ +V A GV + + L++ Sbjct: 834 YLKRLPLSLLKIDQSFVRDILVDANDAAIAEMIITLAKTLGLEVIAEGVETPEQRDFLLE 893 Query: 617 RGVTGGQGDFFASSQPLDTNVKKYSQRYS 645 G QG F P+D K+ R + Sbjct: 894 MGCHQFQGYLFGRPGPVDQLEKRLVGRRT 922 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 692 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 80/475 (16%), Positives = 194/475 (40%), Gaps = 21/475 (4%) Query: 178 GERGSNVLGTIYEWPPRTSSALDT---LLREIQNAREQHSRLDTLIRSYAAQDVKTGLNN 234 + S+ + + + +++ Q +++ I+ +A D T L N Sbjct: 460 RKDQSSFPVEYVISSIKEGTEIVGEVITFKDVT----QRKQMEEEIKYHAYFDSLTDLPN 515 Query: 235 RLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMM 294 R+ ++L L + V+ + L F ++DT GHS + + N LS + Sbjct: 516 RVLLKDRLTQGLTYAQLHAEKLAVLYLDLDRFKFVNDTLGHSFGDLLLREVANRLSACV- 574 Query: 295 RYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICA 353 A ++R +F LP+ + KE + ++I + + + IGI Sbjct: 575 -PKSATVSRQGGDEFTIYLPNIKSEKEVLKVVNRVIDSFSRPFHLVDNEIYMKTSIGISI 633 Query: 354 WRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGP 412 + G TE ++++A++A + G+S+ + + + + +++ + + L + Sbjct: 634 FPDNGDTTEILVKNADTAMYKSKEISGSSYHFFSEGMDTRTFESIKLENDLYKALEQEEL 693 Query: 413 RLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIP 470 +Y +P + + ++ E + R + +++P+ + GL + Sbjct: 694 VIYYQPQINGKTNKIEGVEALIRWNHQEHGMIPPDKFIPIAEETGLIVPIGEWVLKEACR 753 Query: 471 LLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQH 525 L+ W ++ +++ ++ L + +++ L + E K I +EL E + ++ Sbjct: 754 QLKKWHDQGSPLISMSVNLSARQLEQSDLFAMVKNVLEEVE-LSPKYIQLELTENLIVRN 812 Query: 526 ISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLL 585 ++ + LG+ +A++ G S ++K+L + LK+ V+++ K + + Sbjct: 813 TESTLKTMKKLKGLGINLAIDDFGTGYSSLGYLKKLPISTLKIDKSFVQDMTKD--DAAI 870 Query: 586 VQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 +++ + V A GV ++ + + L R QG FF+ + K + Sbjct: 871 TNTIITLAKNLNLDVIAEGVETKEQVEFLSARNCYLMQGYFFSRPMAAEDIEKLF 925 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 692 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 97/490 (19%), Positives = 193/490 (39%), Gaps = 16/490 (3%) Query: 163 AGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRS 222 G E R E S T + +I + I Sbjct: 302 RGHWQGELINQRKSGEEFPSWFSVTQVTNSRGEPEHYIAIFNDITEHKNSR----AQIEF 357 Query: 223 YAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQF 282 A D TGL NR+ +++L + + G ++ I L F ++D+ GH ++ Sbjct: 358 LAHHDALTGLPNRILLNDRLEMAITQVRRQGEKLGILFIDLDRFKNVNDSLGHGVGDQIL 417 Query: 283 FTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPNNKML 341 L+ + G ++R +F L P RT + +L + + + Sbjct: 418 QEAAKRLTANVR--TGDTVSRLGGDEFVVLFPRVRTEGNLADLTIKLREQLQLPYTVDGI 475 Query: 342 DRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWR 400 IGI + G+D ++++A++A A +G N++ Y +L K ++ Sbjct: 476 SLHITPSIGIAVYPDDGEDPNTLIKNADAAMYLAKEKGRNNYQFYTPTLNAKTLDRLKLE 535 Query: 401 TLIEQMLSRGGPRLYQKPAV-TREGQVHHRELMCRIFD-GNEEVSSAEYMPMVLQFGLSE 458 + + + G L+ +P + GQ+ E + R +S AE++P+ + GL Sbjct: 536 SDLRSAIDAGDFELHYQPQIIGSSGQLWGLEALIRWRHRERGLISPAEFIPLAEETGLIV 595 Query: 459 EYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRI 513 + + + L W + +++ ++ + F ++ L + + I Sbjct: 596 GLGDWVLVQAVKQLAEWRRQGHNHLVVSVNISALQFRQGDFLDRVKHILQEAQLV-PDAI 654 Query: 514 IIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLV 573 +EL E + Q + ++ + LG R+A++ G S ++++ L + +LK+ V Sbjct: 655 ELELTETMLMQDVQSAIQTLKGLRELGFRIAIDDFGTGFSSLNYLRHLPINVLKIDQSFV 714 Query: 574 RNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 R + + E+ +V+S++ + A GV +R+E+ L RG QG FFA P Sbjct: 715 REMLQEPESLAIVESIIALAQALGKETIAEGVETRAEFDVLQARGCRLMQGYFFARPMPP 774 Query: 634 DTNVKKYSQR 643 + Y Q+ Sbjct: 775 VIFDQWYQQQ 784 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 692 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 98/499 (19%), Positives = 183/499 (36%), Gaps = 16/499 (3%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F W G+ E R ++ + + + + +I R Sbjct: 834 FYLDMWQALGTQGRWRGELWNRRKDGQTFLESLTISAVKDAQGKVAHYVGVFSDITELR- 892 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 R + A D TGL NRL ++L L+ + T V I L F ++D Sbjct: 893 ---RAHDQLDHQAHHDPLTGLPNRLLLGDRLHKALQRAHRDETGLAVFFIDLDRFKNIND 949 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAE-SIAGQLIK 330 T GH + + L M + R +F ++ A IA +++ Sbjct: 950 TLGHQVGDRVLCEVAWRLGRLMRE--SDTVGRLGGDEFLIVIEDVGEPTAVSHIAEKILN 1007 Query: 331 AVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSL 389 + P + IGI + G D E +M++A+ A A +G N++ + L Sbjct: 1008 VLQASPVTVEHEFFVGASIGISVFPQDGADAETLMKNADVAMYRAKERGRNTYEFFTKDL 1067 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEY 447 + ++ T + + + RG R+Y +P + G+V E + R V E+ Sbjct: 1068 TQTSLARLQMETDLRRAIERGELRVYLQPQFSLATGKVVGAEALVRWLRPQQGLVLPGEF 1127 Query: 448 MPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLA-----IQVTVESLIRPRFQRWLRDTL 502 + + + GL W LA + V+ R R Q+ R TL Sbjct: 1128 IKLAEESGLIVPIGEWVQGTAACQWATWVAAGLAPGVLSVNVSGVEFARGRIQQTARRTL 1187 Query: 503 MQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELN 562 + + + +E+ E+ + H V+ + A+G+ + ++ G S +++K L Sbjct: 1188 -ELSGLPARFLELEITESAIMSHAENSVQVLDNLRAMGISLVIDDFGTGYSSLAYLKRLP 1246 Query: 563 VELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGG 622 + LK+ VR + TE+ + ++++ V A GV + ++ + L G Sbjct: 1247 LNKLKVDQSFVRGLPNDTEDCAIARAVIALGHSLQLTVIAEGVETEAQREFLTGEGCDEM 1306 Query: 623 QGDFFASSQPLDTNVKKYS 641 QG P D ++ Sbjct: 1307 QGYLRGRPMPFDDYHARFL 1325 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 692 bits (1787), Expect = 0.0, Method: Composition-based stats. Identities = 88/499 (17%), Positives = 180/499 (36%), Gaps = 15/499 (3%) Query: 154 AVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQH 213 A + G E + ++ +I S +I + Sbjct: 737 AQVRAALEQTGFWQGEVWDRHKEGFDFPKWLMMSIVRDETGAISHYIGSFTDISERKVN- 795 Query: 214 SRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTW 273 + I A D T L NRL ++L + ++ T VM I + F ++DT Sbjct: 796 ---EERIHFLAHHDSLTLLPNRLSLQSRLEKVFQEAFISQTQIAVMFIDMDHFKNINDTL 852 Query: 274 GHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVD 333 GH + + L M ++AR +F +L +A L ++ Sbjct: 853 GHHVGDMLLLEVARRLKNIMGN--DDIVARLGGDEFVVVLSDTDHDRVAKVAEALRSGLN 910 Query: 334 TLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK 392 IGI + G E +M++A+ A A G N++ + ++ Sbjct: 911 QTYLIDNKPLHSSPSIGISLFPTDGDSVEALMKNADMAMYRAKAAGRNNYQFFTAAMNTL 970 Query: 393 GRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPM 450 + T + Q ++ LY +P V GQV E + R V+ ++P+ Sbjct: 971 VTERQQIETGLRQAIACNELLLYYQPQVDISSGQVVGVEALIRWQHPELGLVAPDRFIPI 1030 Query: 451 VLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQC 505 + + + + + L W ++ +A+ ++ L + + + L + Sbjct: 1031 AEEIDMIIPIGQWVLENALAQLAEWRDKGAKGLRMAVNLSAHQLRKDTIVADIINVLTK- 1089 Query: 506 EKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVEL 565 K + + +E+ E+ Q+ + ++ + G+ +A++ G S S++K L ++ Sbjct: 1090 HKLGKGALELEITESVAMQYPEQNAKLLAELRQHGIELAIDDFGTGYSSLSYLKLLPLDR 1149 Query: 566 LKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGD 625 LKL V++IE + + + + V A GV + ++ L G QG Sbjct: 1150 LKLDRSFVKDIESDPNDAAISAATISMAHELGLTVVAEGVENEAQLVLLSGMGCDLVQGY 1209 Query: 626 FFASSQPLDTNVKKYSQRY 644 +F+ D + + + Sbjct: 1210 YFSKPLAADDCFRFIERNF 1228 >UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SC6_GEOMG Length = 821 Score = 692 bits (1787), Expect = 0.0, Method: Composition-based stats. Identities = 87/486 (17%), Positives = 177/486 (36%), Gaps = 19/486 (3%) Query: 167 LLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQ 226 E G + ++ ++ +I + R + IR A Sbjct: 333 SREVERILDDGEPSGLRLSAFPVFNEQGKATKFIKVVEDITD----RKRAEEKIRRLAYY 388 Query: 227 DVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLT 286 D TGL NR ++L+ + + G ++ + L F ++D+ GH + + Sbjct: 389 DSLTGLPNRPLMMDRLSQAIRHARRHGEVVALLFLDLDRFKDVNDSQGHRVGDRLLQEVA 448 Query: 287 NLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPNNKMLDRDD 345 LS LAR +F + P R +A +A +++ A+ Sbjct: 449 ARLSGCTRE--SDTLARLGGDEFVIIAPGVRAATDASLLADKILAALAEPFTLDRQTLHI 506 Query: 346 MIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIE 404 IGI + G + E +++ A+ A A +GGNS+ + + + + Sbjct: 507 ATSIGIVLFPSDGGNGEMLLQRADMAMYAAKDRGGNSYRFFSAEMNTRAVERHELEEDMR 566 Query: 405 QMLSRGGPRLYQKPAVTREG--QVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYD 461 Q L+ G L +P V G +V E + R + + ++P+ + G + Sbjct: 567 QALTNGEFFLMYQPQVN-TGTWKVVGVEALVRWNHPRKGVILPSRFIPVAEETGFISKLG 625 Query: 462 RLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIE 516 R + W + L + + + D L + + + IE Sbjct: 626 RWVLEEACRQGAQWQHDGLPPLQMGVNLCARQFTHEEIVGTVSDVLQKT-GLPSELLEIE 684 Query: 517 LAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNI 576 L E + + + ALGVR+A++ G S +++K ++ +K+ +R+I Sbjct: 685 LTETMLM-DSETAVSTLGQLKALGVRLAIDDFGTGYSSFNYLKHFPLDRIKIDQSFIRDI 743 Query: 577 EKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTN 636 + N +++++V +V A GV + + + L+ QG +F+ D Sbjct: 744 GQSRGNGAIIEAIVAVARSLGPEVLAEGVETEEQLRYLMSITCADIQGFYFSRPLLPDDV 803 Query: 637 VKKYSQ 642 + + Sbjct: 804 SRLIRE 809 >UniRef50_A1SZV0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV0_PSYIN Length = 711 Score = 691 bits (1785), Expect = 0.0, Method: Composition-based stats. Identities = 94/633 (14%), Positives = 217/633 (34%), Gaps = 29/633 (4%) Query: 34 IQYKFSHRVQAVATAIDTHLVSNDFSVLRPQITELMMSADIVRVDLLHGDKQVYTLARNG 93 Q QA + + M+ A + L K L Sbjct: 83 GQDDLDSVRQAYEAGATDFVTKPFNWKILAHRLRYMVRASDITEQLEELQKSESRLGNAQ 142 Query: 94 SYRPVGSSDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFL 153 +G+ + + + + + + F ++ P F+ + L Sbjct: 143 RIARLGNWEWDLKSNEIYWSEQLYHMLWLRRGVAKPSFRGFISRLPHGERKDFMGWIQGL 202 Query: 154 AVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQH 213 + Q G + ++ + + + ++ + Sbjct: 203 RHGAKEEQRGG---WNHSLNQADGSRLNVQHQAEVFYDENGAAKVVSGTVVDVTELTQAQ 259 Query: 214 SRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTW 273 I A D TGL NR F ++ +E ++ G G V+ + L +F ++DT Sbjct: 260 ----DQILQLAHFDSLTGLANRNAFRKRVELAMERAKQYGHLGAVLFLDLDNFKRINDTL 315 Query: 274 GHSQVEEQFFTLTNLLSTFMMRYPG------------ALLARYHRSDFAALLPHRT-LKE 320 GHS ++ + L+ + L++R +F LLP +K+ Sbjct: 316 GHSIGDQLLQEVARRLTDIVRGSDSICGTNFNHAIDDNLISRLGGDEFTVLLPEIGKIKD 375 Query: 321 AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGG 379 AE A +++ ++ + N D IGI + G++ + ++++A++A G Sbjct: 376 AEHAARRVLNSIGDIINLSGHDIVVTPSIGIAIFPHHGENVDSLLKNADAAMYYVKRAGK 435 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDG 438 N + ++ +S+ + + + + + + +P + G++ E + R Sbjct: 436 NDYELFVNSMNVVAKRRLELESFLRHAIDNKELSVNYQPQIDIPTGRIIGAEALLRWNSA 495 Query: 439 N-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRP 492 VS E++P+ + GL + ++ W ++ L A+ ++V+ + Sbjct: 496 ELGMVSPVEFIPIAEETGLISPIGEWVLREACRQVKEWRDDGLPEIQIAVNISVQQFAKQ 555 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 + + L++ + +E+ E + + + + LG+ +A++ G Sbjct: 556 SLDKLVSKVLLET-GLPVHCLELEITENMLMDDVEGAVETLHKLKDLGINLAIDDFGTGY 614 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S S++K ++ LK+ + + + + Q+++ V A GV S+ + Sbjct: 615 SSLSYLKRFPIDKLKIDRSFITYVTTEPSDAAVTQAIISMAHNLGLTVIAEGVEEASQLE 674 Query: 613 TLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYS 645 L Q QG +F+ Sbjct: 675 FLRQHHCEEMQGYYFSRPLIASDMEALLRSHKG 707 >UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Comamonadaceae RepID=A1WHK4_VEREI Length = 836 Score = 691 bits (1785), Expect = 0.0, Method: Composition-based stats. Identities = 107/593 (18%), Positives = 210/593 (35%), Gaps = 32/593 (5%) Query: 64 QITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLRLVY 123 Q+ +D +RV+ ++ + AR S + S + G +L Sbjct: 251 QVRTFADVSDYLRVE----NQLRDSEARFRSLSDLSSDWYW------EHDAQGRFTQLAG 300 Query: 124 QDPMGNYFHSLMTTAPLTGAIGFIIV-MLFLAVRWLQRQLAGQELLETRATRILNGERGS 182 + S + + + A R + LE + R Sbjct: 301 DLSVNGMPLSAVLGRTRWEIGALNMTEADWAAHRAVLAAQQPFRDLELQRRRADGSMHWI 360 Query: 183 NVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQL 242 +V G + T + R+I + + I A D TGL NR ++L Sbjct: 361 SVSGVPVQGADGTPRGYRGVGRDITG----RKQAEGQIERLAFYDALTGLPNRRLLLDRL 416 Query: 243 ATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLA 302 + T G ++ I L +F L+DT GH + L + +A Sbjct: 417 QHATVAVTRSNTQGALLFIDLDNFKSLNDTLGHDAGDHLLQQAAQRLKACVREV--DTVA 474 Query: 303 RYHRSDFAALLPHRTLKEAESIA------GQLIKAVDTLPNNKMLDRDDMIHIGICAW-R 355 R+ +F LL + A++ A + ++ IGI + Sbjct: 475 RFGGDEFVVLLAGLSAAAAQASAEAAQVAKHIAASLGQPYALGGAVHHSTPSIGIALFGP 534 Query: 356 SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLY 415 +++++ A+ A A G N+ +D + + + L + L+ Sbjct: 535 QACRVDELLKQADLAMYQAKAAGRNTQRFFDPEMQAAASHRSALEADLRRGLQQRELVLH 594 Query: 416 QKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRY 474 +P V +G++ E + R + AE+ P+ Q GL + + L Sbjct: 595 YQPMVDGQGRLQGAEALVRWNHPQRGLMPPAEFTPLAEQTGLILPLGQWVLETACAQLVA 654 Query: 475 W------PEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISR 528 W +L++ V+V + F + L TL + + +R+ IEL E+ + + Sbjct: 655 WSRSALTRAFSLSVNVSVRQFRQADFVQQLLATL-EASGANPERLTIELTESLLLNDVQD 713 Query: 529 LQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQS 588 + ++ + G+ A++ G S S +K L ++ +K+ VR++ + +V+S Sbjct: 714 IIARMQQLRCHGLGFALDDFGTGYSSLSQLKRLPLDQIKIDRSFVRDLPADAGDGAIVRS 773 Query: 589 LVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 ++ V A GV +R++ + L G QG F P + ++ Sbjct: 774 ILALAQSLGLAVVAEGVETRAQLEFLQHHGCQTFQGYHFGRPMPPEALAHRFQ 826 >UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y2A0_LEPCP Length = 810 Score = 691 bits (1784), Expect = 0.0, Method: Composition-based stats. Identities = 86/490 (17%), Positives = 186/490 (37%), Gaps = 22/490 (4%) Query: 163 AGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRS 222 G+ E R + +++ P + + ++ +I ++ + Sbjct: 319 DGRHEEELMLHRRDGSQFWAHLRVR-QLDPAQPQAGCIWVIEDIS----ARKAVEDEVNR 373 Query: 223 YAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQF 282 A D T L NR ++LA L + G HG ++ I L +F L+DT GH++ ++ Sbjct: 374 LAFYDPLTQLPNRRLLRDRLAQALAASARSGMHGALIFIDLDNFKSLNDTLGHARGDQLL 433 Query: 283 FTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK------EAESIAGQLIKAVDTLP 336 + L+ + +AR +F ++ + +AE + +++ A++ Sbjct: 434 KLVGQRLTHCVRE--SDTVARLGGDEFVVIVQDLGARLDECATQAEGVGEKILDALNQPY 491 Query: 337 NNKMLDRDDMIHIGICAWRSGQD-TEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRG 395 R IGI + +D + +++ A+ A A G N+ +D + Sbjct: 492 PLDGHVRHSTPSIGITLFADDRDSVDDLLKEADMAMYQAKTAGRNTLRFFDADMQAMLVQ 551 Query: 396 NVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NEEVSSAEYMPMVLQF 454 + + + L+ +P V G++ E++ R V AE++P+ Sbjct: 552 RAALEEDMRESMRLSHFLLHYQPQVVGSGRITGAEVLLRWPHPLRGLVPPAEFIPLAEDT 611 Query: 455 GLSEEYDRLQISRLIPLLRYWPEE------NLAIQVTVESLIRPRFQRWLRDTLMQCEKS 508 L + L W + ++++ V+ +P F + L + + Sbjct: 612 NLITALGHWVLETACKTLADWSAQDDMKHLSVSVNVSARQFRQPHFVAEVMSILERT-GA 670 Query: 509 QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKL 568 + +EL E+ + + + + + + + GV +++ G S + +K L ++ LK+ Sbjct: 671 DPHLLKLELTESLLVEDVEDIVAKMSALKSRGVGFSLDDFGTGYSSLAHLKRLPLDQLKI 730 Query: 569 HPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFA 628 VR+I + + + +V V A GV ++ + L Q G QG F+ Sbjct: 731 DQSFVRDILTDPNDLAIGRMVVALADSLGLTVIAEGVELAAQRELLAQIGCDAYQGYLFS 790 Query: 629 SSQPLDTNVK 638 P + Sbjct: 791 RPLPREPFEA 800 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 690 bits (1783), Expect = 0.0, Method: Composition-based stats. Identities = 91/462 (19%), Positives = 194/462 (41%), Gaps = 16/462 (3%) Query: 193 PRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKV 252 + + + ++R+I N +E + I A D TGL NR F + QL ++ + +K Sbjct: 351 DQQITGVFMIVRDITNKKE----YEAKINYLAFHDSLTGLPNRRFVEQQLDQVIMEAQKT 406 Query: 253 GTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAAL 312 V+ + L F +++D+ GH + + L + + + R +F + Sbjct: 407 DQQVYVLFLDLDHFKLVNDSLGHDFGDLLLQEASLRLRECVGKKG--TVYRLGGDEFMVI 464 Query: 313 LPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESAT 371 L T +E S+A ++ + ++ + IGI + GQD +M +A++A Sbjct: 465 LTDVTEREVSSMANEINETIEQAFFIHGHELYITTSIGISRYPEDGQDRSVLMRNADAAM 524 Query: 372 RNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRE 430 A +G NS+ +Y +L + + + + + L+R L+ +P V+ G + E Sbjct: 525 YAAKDKGKNSFHLYVPNLEQAVNDKMNIQNELNRALARQEFLLHYQPQVSAKSGAIVGVE 584 Query: 431 LMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQV 484 + R + +++ + + GL + + W ++ L A+ + Sbjct: 585 ALIRWDHPERGLLLPDQFISVAEETGLIVPIGEWVLRTACKQNKQWQDQGLKPLRVAVNL 644 Query: 485 TVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVA 544 + ++ F + + + L Q + + + +E+ E+ + + R ++ + LGV VA Sbjct: 645 SARQFLKQDFTQMIAEILHQT-RLAPEYLELEITESSMI-DVHRATQALKELKQLGVHVA 702 Query: 545 VNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATG 604 ++ G S ++KE + LK+ VR++ ++ NQ +V +++ V A G Sbjct: 703 IDDFGTGYSSLYYLKEFPLNRLKIDRSFVRDMIEQPSNQAIVSTIISMAHHLQMHVIAEG 762 Query: 605 VRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV 646 V ++ E L + QG F+ P + + V Sbjct: 763 VETKEELAFLQEHLCEEVQGYLFSRPLPSEDVAFYLQAQKGV 804 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 690 bits (1782), Expect = 0.0, Method: Composition-based stats. Identities = 105/514 (20%), Positives = 202/514 (39%), Gaps = 31/514 (6%) Query: 139 PLTGAIGFIIVMLFLAVRW-LQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSS 197 P A G I +++ ++ R +QRQLAG + R E Sbjct: 263 PSNVAQGSIWIVMDVSERLRIQRQLAGMHGELEQQVRDRTREL---------------QE 307 Query: 198 ALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGI 257 + L REIQ+ R I A D T L NR+ + + ++ G Sbjct: 308 TVGNLHREIQD----RQRDQERIYWMAHYDALTELPNRVLLAERGQDAIRQAQESGAPLA 363 Query: 258 VMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT 317 VM + L +F ++D+ GH + + L T + + +AR +F LLP Sbjct: 364 VMFLDLDNFKHVNDSLGHRIGDALLVEIAQRLRTTVRQR--DTVARLGGDEFVLLLPGAN 421 Query: 318 LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGL 376 + A +A ++ +A + + + + +GI + G D E +++ A++A A Sbjct: 422 AQGAARVAAKMQEAALQPVHIQHHELSLALSMGIALFPEHGSDFETLIQSADTAMYRAKA 481 Query: 377 QGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRI 435 G NS+ + ++ + ++ + + L R L+ +P V+ G+V E + R Sbjct: 482 DGRNSFRFFTPTMQAQSARALQLTNALRRALERNQLSLHYQPQVSIATGRVCGVEALLRW 541 Query: 436 FDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESL 489 VS AE++P+ G + + LR W + L A+ ++ Sbjct: 542 HHPELGAVSPAEFIPVAEDTGQILPIGEWVLRTALAQLRTWHSQGLPALTMAVNLSAVQF 601 Query: 490 IRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAG 549 +P+ + L + Q + +EL E + ++A GVR++++ G Sbjct: 602 RQPQLLELVDRLLAEY-GVQPHLLELELTENVAVADPHAAIATMDQLHAKGVRLSMDDFG 660 Query: 550 LTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRS 609 S S +K + LK+ VR+++ ++ +V +++ + A GV + Sbjct: 661 TGYSSLSHLKRFQIYRLKIDQSFVRDLDHDGNDRAIVSAIIRMAQALGMRTTAEGVETAH 720 Query: 610 EWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 + L ++G QG +F+ + QR Sbjct: 721 QLTFLREQGCDEAQGFYFSRPLGAPHLQQYLLQR 754 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 104/569 (18%), Positives = 204/569 (35%), Gaps = 25/569 (4%) Query: 91 RNGSYRPVGSSDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVM 150 + + + S++ + + L + N + + +G + Sbjct: 479 QARTSAALRESEVKYRKVLETSQDGFWLLNRDWLLTEVNDAYIEFSGYRREELVGMHVTQ 538 Query: 151 LF------LAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLR 204 L +A G ETR + V T + ++ +R Sbjct: 539 LDASDASEMARHIASAVEDGNATFETRHRTKSGELKPVEVSVT---FDAGRAACFSLFVR 595 Query: 205 EIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLP 264 ++ E IR + D TGL N F + L + + ++ G VM I + Sbjct: 596 DLSRRDEAQ----EHIRRLSHFDTLTGLPNSSLFADLLRQAIGNAQRSGESLSVMYIDID 651 Query: 265 DFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESI 324 F ++DT GH + + + LAR +F LLPH ++ A + Sbjct: 652 HFQHINDTLGHRIGDRLLVEIAGRFRNAL--CAENTLARLGGDEFLILLPHAQVECAAHV 709 Query: 325 AGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWA 383 A +LI A + + IGI + G+D E +++ A++AT A G N++ Sbjct: 710 AEKLIVAAADPMLIEDHEMLVTPSIGIAMYPADGEDFETLLQRADTATNRAKSDGRNTYR 769 Query: 384 IYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE--GQVHHRELMCRIFDGN-E 440 + + + +R T + + L R L+ +P + G+V E + R Sbjct: 770 FFAPEMQLRSAHTLRLETALRRALERNELVLHYQPQIDLVDFGRVAGVEALIRWQHPEFG 829 Query: 441 EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQ 495 VS AE++P+ GL + + L+ W L + ++ + Sbjct: 830 LVSPAEFIPIAESTGLILPIGEWVMQTALLQLKAWQLAGLQLGQVGVNLSAHQFRQQNLP 889 Query: 496 RWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVST 555 + L + + +EL E+ + ++ ++ GVR++++ G S Sbjct: 890 ATVARILAEA-GLPASCLELELTESAMMDDPVAAVAMMDALHRDGVRMSIDDFGTGYSSL 948 Query: 556 SWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLI 615 +++K ++ LK+ VR++ + E + +V+++V + A GV + L Sbjct: 949 NYLKRFRIDKLKIDQSFVRDLTQDPEGEAIVEAIVSLARTLRFRTIAEGVEKPEQLAFLR 1008 Query: 616 QRGVTGGQGDFFASSQPLDTNVKKYSQRY 644 G QG F+ P D Sbjct: 1009 ASGCQEVQGYLFSRPLPPDELAVWLRAWR 1037 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 92/495 (18%), Positives = 187/495 (37%), Gaps = 15/495 (3%) Query: 149 VMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQN 208 F A W G+ E R + R+I Sbjct: 327 DADFYAEIWQAIFRDGRWQGEIWNRRKDGQVFVAWESIVAVYDEAGAIRYFIGSFRDITE 386 Query: 209 AREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNM 268 E I A DV T L NR+ F ++L + + ++ + L F Sbjct: 387 QVEAQRH----ILRLAHYDVLTDLPNRVLFQDRLERAVVHALRHDRQAALLFLDLDGFKK 442 Query: 269 LSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK-EAESIAGQ 327 ++DT GH ++ + L + +AR +F +L + +A +A + Sbjct: 443 VNDTMGHRAGDDLLKEVAVRLRGCVRMT--DTIARLGGDEFTVILDEISAANDASMVADK 500 Query: 328 LIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYD 386 ++ ++ D IGI + G +++++HA++A A G + Y Sbjct: 501 ILASLHAPIFIDGRDVFIGTSIGISLFPIDGTSGDELLKHADTAMYQAKAAGKGRFNFYS 560 Query: 387 DSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSS 444 + ++ + T + Q + G +++ +P +V E + R +S Sbjct: 561 AEMTKREEHRLELETALRQAVEEGQFQVHYQPQKNLATNRVSGFEALVRWQHPRLGMISP 620 Query: 445 AEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN----LAIQVTVESLIRPRFQRWLRD 500 +++P+ + L + D + + R W ++ +A+ ++ + R +R Sbjct: 621 VDFIPLAEEMHLIDRIDMFVMRQACRKGRQWRDQGYDICMAVNLSGVNFSRDDLPEQVRQ 680 Query: 501 TLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKE 560 L + + +E+ E+ V + V++ + ALGV++A++ G S S++K Sbjct: 681 VLEDT-GFPAENLELEITESFVIDLEVDQREVLQRLRALGVKLAIDDFGTGYSSLSYLKR 739 Query: 561 LNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVT 620 L V LK+ VR+I + + + +LV S++ +V A G+ R + L+ + Sbjct: 740 LPVNTLKIDRSFVRDIARDSRDMMLVSSIIGIAHSLGLKVVAEGIEERDQLAILLSQECD 799 Query: 621 GGQGDFFASSQPLDT 635 QG A P + Sbjct: 800 EIQGYLIAKPMPAEQ 814 >UniRef50_A0L8P4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8P4_MAGSM Length = 754 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 83/506 (16%), Positives = 184/506 (36%), Gaps = 16/506 (3%) Query: 149 VMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQN 208 F W + G E R + + +I Sbjct: 241 DATFYTNMWRKIAEEGFWQGEIWDRRKNGEIYPKRLTINAVRNQAGEVENYIGIFSDISE 300 Query: 209 AREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNM 268 ++ +L+ A D T L NR+ F ++L + ++ V I L F Sbjct: 301 SKATELKLE----RLAYYDALTQLPNRMLFHDRLEHEFYNAQRHRKQVAVFFIDLDRFKQ 356 Query: 269 LSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE-AESIAGQ 327 ++DT GHS +E + L + +AR +F +L + E +A + Sbjct: 357 VNDTLGHSAGDELLQHVAQRLEGCVR--AADTVARMGGDEFTVILADISDNESVARVARK 414 Query: 328 LIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYD 386 +++ + + K D IGI + G D E + ++A+ A A G ++ + Sbjct: 415 VLEELQKSISIKGHDIFVGASIGIALYPDNGNDVETLTKNADMAMYRAKESGRGNYKFFS 474 Query: 387 DSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNE-EVSS 444 + + + + + ++ +Y +P + + G + E + R + + Sbjct: 475 EEMNVSTSQRLSLESQLHHAVNANLLEVYYQPKLNMQSGIMVGMEALVRWPQADGSMIPP 534 Query: 445 AEYMPMVLQFGLSEEYDRLQISRLIPLLRYW-----PEENLAIQVTVESLIRPRFQRWLR 499 +++P+ + GL RL + + + W +A+ ++ P + Sbjct: 535 IQFIPVAEETGLIVPLGRLVMRQAMLDCARWVRETGMNLRVAVNLSAREFQSPGLVVEIE 594 Query: 500 DTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIK 559 TL +C + +E+ E+ + + + ++ LG+ +A++ G S S++K Sbjct: 595 QTLAEC-GLDARHFEVEITESLMMHDVENAIATLEQISRLGIHIAMDDFGTGYSSLSYLK 653 Query: 560 ELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGV 619 + + LK+ V++I + +V +++ + +V A GV ++ + L Q Sbjct: 654 KFPIHSLKVDRSFVKDIPDDPNDIEIVAAILSLAKVLNLKVVAEGVETQEQLSFLRQNLC 713 Query: 620 TGGQGDFFASSQPLDTNVKKYSQRYS 645 QG F+ + ++ Sbjct: 714 DECQGYSFSKPLSAVDFTAFLADVHN 739 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 99/505 (19%), Positives = 189/505 (37%), Gaps = 17/505 (3%) Query: 149 VMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQN 208 ++ W + G E ++ T + L +I Sbjct: 734 DGIYFRQLWRGIRKRGSWQGEFWCRHKNGEVSPQWMVVNTVHDRQGTVTNYIALFTDISA 793 Query: 209 AREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNM 268 + Q + I+ A D T L NRL +L L+ + G H V+ I L F Sbjct: 794 QKSQ----EQRIQHIAHHDALTNLPNRLLCMERLILALQQAHRNGRHVAVIFIDLDHFKN 849 Query: 269 LSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAG- 326 ++D+ GH + T N LS + G ++R +F +L + E I Sbjct: 850 INDSLGHHVGDCVLVTAANRLSMGVR--DGDTVSRLGGDEFVIILADIEDSHQIEEIMKH 907 Query: 327 QLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIY 385 +L+ + + + IGI + G D + ++ +A++A A G N++ Y Sbjct: 908 RLLPLMRQPYDAGGYELHCSCSIGISIFPEDGLDKDTLLRNADTAMYRAKEVGRNNYHFY 967 Query: 386 DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVS 443 + L + + T + + + R L+ +P + G+ + E + R + +S Sbjct: 968 TEELNSRAMQRLSIETSLRKGIERNELLLHYQPKLDLHTGKPYGLEALLRWQHPDHGMIS 1027 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWL 498 E++P+ + GL + I L W L++ V+ RF L Sbjct: 1028 PMEFIPIAEETGLIIPIGKQVIRNACRQLSRWSSVGMSHICLSLNVSAVQFRDRRFVEDL 1087 Query: 499 RDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWI 558 L++ E RI +EL E + + R V+ + G +++ G S +++ Sbjct: 1088 VQ-LVREEGVSPHRIELELTETMLMEDAVRTIRVMETLKDEGFLFSIDDFGTGYSSLNYL 1146 Query: 559 KELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRG 618 ++ LK+ +R + +R + ++++++ QV A GV E++ L G Sbjct: 1147 HRFPIDCLKIDRSFIRGMLERPADLAIIKAIIGLGHTLDMQVIAEGVEKEDEYRALRAAG 1206 Query: 619 VTGGQGDFFASSQPLDTNVKKYSQR 643 G QG F A + + R Sbjct: 1207 CDGIQGYFVARPLTPEQVPEWLLAR 1231 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 93/484 (19%), Positives = 183/484 (37%), Gaps = 17/484 (3%) Query: 167 LLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQ 226 LE R ER P + L ++++I + Q R I A Sbjct: 214 SLEHRLVHADGTERCVLHQAESGRDP-NHAIILRGIVQDITERKMQQGR----IEYLANH 268 Query: 227 DVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLT 286 D TGL NR +++ + + G VM++ L F ++D++GHS + + Sbjct: 269 DALTGLPNRNLLSDRMEQAMSQARRTGQLVAVMVLDLDRFKHINDSFGHSVGDGLLRVVA 328 Query: 287 NLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDD 345 L + G +AR +F +L + T +A+ IA +++ D Sbjct: 329 ARLKRSVR--DGDTVARLGGDEFVVMLVNLATQADADVIARKILDTFIEPFTLDEHDLHV 386 Query: 346 MIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIE 404 +G+ G + E +++ A++A A G N + Y L + + Sbjct: 387 TTSVGVSLCPTDGTNAETLLKTADAALYAAKEHGRNCYRFYTRELGARVEEQTILENALH 446 Query: 405 QMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDR 462 Q ++ LY +P V GQ+ E + R + ++P+ GL Sbjct: 447 QAVANHELELYYQPKVDLKTGQISGVEALIRWRRPGIGVIPPDRFIPIAEDCGLILPIGE 506 Query: 463 LQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIEL 517 + W E +A+ ++ + +R TL + + +EL Sbjct: 507 WVLRTACMQAVAWRREGHPPIRIAVNLSARQFRQQDVAAMVRTTLEET-GLAPDSLELEL 565 Query: 518 AEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIE 577 E+ + Q + + +R + ALGV ++++ G S S++K+L ++++K+ + ++ Sbjct: 566 TESVLMQDCNAIAHTLRELKALGVVLSLDDFGTGYSSLSYLKDLPIDVVKIDRSFLDDVT 625 Query: 578 KRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNV 637 E L +S++ + A GV + ++ L + QG +F+ D Sbjct: 626 TSAEGASLTRSIIAMAESLHMETVAEGVETEAQLSFLNRHRCHAMQGYYFSHPVTGDEIA 685 Query: 638 KKYS 641 S Sbjct: 686 DMLS 689 >UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Bacteria RepID=B7KEB0_CYAP7 Length = 684 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 104/591 (17%), Positives = 229/591 (38%), Gaps = 25/591 (4%) Query: 67 ELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPG------MSLR 120 E+ + I+ + Y N +Y+ + ++D+ +++ I +P SL Sbjct: 98 EIQATYYIINSPVNSSFSPQYHYLEN-NYKSLTATDINKKIKEKTIVYPQDFLFKLASLV 156 Query: 121 LVYQDPMGNYFHSLMTTAPLTGA-IGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGE 179 + +P+ T + A F + L + L Q + I + Sbjct: 157 ELSPNPIFEVNFQGKITYLNSLANQKFKDLKKKSLHHPLLKNLLDQGKPKDEKIVIREVK 216 Query: 180 RGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFD 239 G V + + +I + + + + A D T L NR F Sbjct: 217 IGDEVFEQHLHYLTENKLIRSYIF-DITDRKM----AENSLHYQAYYDTLTDLPNRSLFY 271 Query: 240 NQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGA 299 +L+T L T VM I L F ++DT GH+ +E + L + Sbjct: 272 EKLSTALAKAYLEETLIAVMFIDLDGFKNINDTLGHTLGDELLGSFAQRLRHNLR--SSD 329 Query: 300 LLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SG 357 +LAR+ +F L+P +E E A ++ + IG+ + G Sbjct: 330 ILARWGGDEFTILIPQIKNEEEIEICAKRVFSILQQPFQVGNHLLYLKASIGVAIYPRDG 389 Query: 358 QDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQK 417 QD E ++++A++A G N + IY + K + L+ Q L + L+ + Sbjct: 390 QDAETIIKNADAALYRTKEMGRNHYQIYHPLITSKTSERLEMENLLHQALEKDQFLLHYQ 449 Query: 418 PAVTREGQ-VHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW 475 P + + Q + E + R VS A+++P+ + GL + + R W Sbjct: 450 PQINIKNQAICGMEALIRWEHPTLGLVSPAKFIPIAEESGLIISIGEWVLRQACEQNRLW 509 Query: 476 PEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQ 530 ++ L A+ ++ + +P F + L + + + + +E+ E + +++ Sbjct: 510 QKKGLPPVRVAVNLSAQQFQQPNFVNIVTKILAETN-LEPQFLELEITETTIMKNLEFSC 568 Query: 531 PVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLV 590 ++ + +GV ++++ G S ++K++ +K+ +++++ + ++ ++ +++ Sbjct: 569 QIVHDLKHMGVHISMDDFGTGYSSLGYLKQIPFNTIKIDQSFIKDLQDKPQDLAIISAVL 628 Query: 591 EACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 G + +V A GV ++ + + L + QG F+ + S Sbjct: 629 AIGRGFNVRVIAEGVETQHQVELLRKLECEEMQGFKFSKPLKPEAAANFLS 679 >UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B8HP13_CYAP4 Length = 1094 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 101/586 (17%), Positives = 221/586 (37%), Gaps = 19/586 (3%) Query: 66 TELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLRLVYQD 125 T+++ + ++ + S + +F+ +L +Y Sbjct: 500 TQIIAVIRNITKRKRAENELRQAEEKYRSIFENATEGIFQSSPSGSYISANPALARIYGY 559 Query: 126 PMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVL 185 +T + F+ Q Q+ E++ R + Sbjct: 560 DSPQELQHHLTDIGRQLYVNPDRRQQFVHSILEQGQVTD---FESQVYRKDGSVIWISEN 616 Query: 186 GTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATL 245 + + +I + + I A D+ TGL NR FD++L Sbjct: 617 ARAVRDRQGNILYFEGTVEDIS----ARKQAELTIHYQAFHDLLTGLPNRALFDDRLNQA 672 Query: 246 LEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYH 305 L D + V + L F +++DT GH+ ++ + L + +AR+ Sbjct: 673 LADARRYQHLLAVFFLDLDRFKVINDTLGHAIGDQLLQQVAQRLLPCLREI--DTIARWG 730 Query: 306 RSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQV 363 +F LLPH T ++ IA +L+ ++ + K + +GI + G+D + Sbjct: 731 GDEFTLLLPHVQTPADSVKIAERLLASLKPPFSLKGHNLHITASLGIALYPHDGEDGTTL 790 Query: 364 MEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR- 422 + +A++A A +G N Y L +G + + + + L + +Y +P + Sbjct: 791 LRNADAALYRAKEEGRNGLYCYTPMLNSRGHELLALESELHKALEQQELDVYYQPQINAA 850 Query: 423 EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL- 480 G++ E + R VS ++ + + GL + + R W Sbjct: 851 TGEILRLEALVRWQHSQLGLVSPQTFIGLAEENGLIMPIGQWVLETACHQCRQWQARGFP 910 Query: 481 ----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLV 536 A+ ++V +P + + +TL Q R+ +E+ E Q+++ + ++ + Sbjct: 911 GLGTAVNLSVRQFQQPHLVQQVAETL-QYTGLAADRLELEITETTAMQNVNLTRTLLHEL 969 Query: 537 NALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGT 596 + +GV +A++ G S +++++ + +K+ ++ + ++Q +V++++ G Sbjct: 970 DQMGVGIALDDFGSGYSSLNYLRQFPLHSIKIDRTFIQELPYSVQDQAIVKAVIALGRGL 1029 Query: 597 STQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 + V A GV S+S+ + L G QG FF + Q Sbjct: 1030 NLSVVAEGVESQSQLKVLRSLGCDIIQGYFFGPPIAAAAMTQLLEQ 1075 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 103/596 (17%), Positives = 207/596 (34%), Gaps = 29/596 (4%) Query: 70 MSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLRLVYQDPMGN 129 S + V + + Q + G R+L + + ++ DP Sbjct: 37 ESERYLEVTVNQLNYQGDAYLCATARDISGRRQTERQLRLAAQVFESSNEAILISDPDNR 96 Query: 130 YFHSLMTTAPLTGAIGFII-------------VMLFLAVRWLQRQLAGQELLETRATRIL 176 +TG + F W Q GQ E R Sbjct: 97 ILTVNRAFGHITGYGEAEVRGSKASMLFSDRHEPAFFQQMWQTLQQRGQWSGEIWNRRKS 156 Query: 177 NGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRL 236 V ++ + S L +I +EQ + ++ A D T L NR+ Sbjct: 157 GEHFPCWVNISVLQDGQGEISHFVALFTDISERKEQ----EARVQHMAEYDALTDLPNRV 212 Query: 237 FFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRY 296 +++L + E V+ + L F ++DT GH +E + L+ + Sbjct: 213 LVNDRLHQAIRQAELQHNQLAVLFVDLDHFKNINDTLGHCAGDELLKEVARRLAGAVRGL 272 Query: 297 PGALLARYHRSDFAALLPHRT-LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR 355 + R +F +LP EA IA ++++ + IGI Sbjct: 273 --DTVGRTGGDEFVLILPSINQPGEAAQIAERILRTIQQPFQIGEHSLVVGCSIGISLMP 330 Query: 356 S-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRL 414 G D + ++ +A+ A +A G N++ Y + + + + + + + L Sbjct: 331 DDGSDIQTLLMNADLAMYHAKAHGRNTFRFYTREMNTQVAERLLMENRLRRAMEQEQLYL 390 Query: 415 YQKPAVTREG-QVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLL 472 +P G ++ E + R D + ++P+ GL R + + Sbjct: 391 VYQPQYDMAGQRLLGCEALLRWRDPDEGLIMPGRFIPVAEDTGLIVPLGRWVLDQACRQA 450 Query: 473 RYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHIS 527 W L A+ V+ L+R F +R+ L + + +E+ E+ + Sbjct: 451 SLWLRAGLEPMRVAVNVSAHQLMRHDFIDDVREALQR-HALPGHCLELEVTESTLMADAD 509 Query: 528 RLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQ 587 + ++ A+GVR+A++ G S +++K +L+K+ + ++ EN +V Sbjct: 510 LASRQLAVIKAMGVRLAIDDFGTGYSSLAYLKRFAPDLVKIDRSFISDLPGDEENAAIVS 569 Query: 588 SLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 ++V + A GV + ++ + L G QG S + ++ Q+ Sbjct: 570 AIVHLAGALGMETLAEGVENENQQRFLQTLGCEAMQGYLLGSPLAEEMMTRRLEQQ 625 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 91/501 (18%), Positives = 190/501 (37%), Gaps = 16/501 (3%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F W + G E R + S L +I +E Sbjct: 770 FYEQMWNEMLSEGHWQGEIWDRRKSGEIFPKWLTIDAIRDEQGVISNFVGLFMDITQQKE 829 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + + A D T L NR F ++L + + G + I L F ++D Sbjct: 830 ----TEEQLEKLAYYDPLTELPNRALFRDRLEQEMRLSARGGKSLGLFFIDLDRFKYVND 885 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL-KEAESIAGQLIK 330 + GH + ++ + + + +AR +F +LP + IAG ++K Sbjct: 886 SLGHDKGDDLLIQVAGRIKHHLR--TSDTVARLGGDEFTVILPGIEQTNDVARIAGAIVK 943 Query: 331 AVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSL 389 ++ + + + IGI G+D E + +HA++A A +G ++ + + Sbjct: 944 SLGEVFVLQGHEVFIGGSIGIAMHPDDGEDYETLTKHADTAMYRAKEEGRGTYKFFTSDM 1003 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEY 447 E + + Q + L+ +P V ++ ++ E + R VS ++ Sbjct: 1004 NEINGRRLSLERALRQAVECNQLTLHYQPKVDVKQCRITGMEALVRWNHPEQGLVSPVDF 1063 Query: 448 MPMVLQFGLSEEYDRLQISRLIPLLRYW-----PEENLAIQVTVESLIRPRFQRWLRDTL 502 +P+ + GL + + + +AI ++ + L +L Sbjct: 1064 IPIAEETGLIITIGEWVMQQACMDAKRLARSSRHPLQVAINLSAKQFQDALLVAKLERSL 1123 Query: 503 MQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELN 562 Q + + +E+ E+ ++R I + ALGV+V+++ G S S++K+L Sbjct: 1124 QQ-SGLAPELLEVEITESLAMGDVNRTIEQIGELRALGVKVSIDDFGTGYSSLSYLKKLP 1182 Query: 563 VELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGG 622 + LK+ ++++ +++ +V S++ S V A GV ++++ L ++ Sbjct: 1183 LNALKIDKSFIQDLYLDSDDTAIVSSILSMASALGLSVVAEGVENQAQIHFLCEKECPTI 1242 Query: 623 QGDFFASSQPLDTNVKKYSQR 643 QG FF+ P + K Sbjct: 1243 QGYFFSKPLPFEAFEKFLLDW 1263 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 78/452 (17%), Positives = 177/452 (39%), Gaps = 14/452 (3%) Query: 204 REIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRL 263 REI R + + DV T L NR F ++L + V+ I L Sbjct: 442 REISEQR--LRDNEDHLEYLVYHDVLTDLPNRQLFRDRLQHAISMASLGQHQVGVLFIDL 499 Query: 264 PDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAE 322 F ++D+ GH + + L + +AR +FA +L ++ Sbjct: 500 DHFKKINDSLGHEVGDRLLCEVARRLRLCIGGL--DTVARLSGDEFAIILDQLNNIENVI 557 Query: 323 SIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNS 381 IA ++ + + + + IGI + G+D +++ A++A A G ++ Sbjct: 558 LIAQEVNRRLAEMMVVEGYKLFLTASIGISLYPGDGKDVVSLLKCADAAMFKAKELGRDN 617 Query: 382 WAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN- 439 + Y L E+ + + Q + + +Y +P V ++ E + R Sbjct: 618 YRFYTAGLNERASELLALEGALRQAVDKNHLVVYFQPQVELASRRIIGAEALVRWQHPEN 677 Query: 440 EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRF 494 +S +++PM + GL + + R W +++ ++ + Sbjct: 678 GMISPVDFIPMAEETGLIVSIGEWVLRQSCLQARQWQVAGYPPMRISVNMSARQFRQKDL 737 Query: 495 QRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVS 554 +R L + + + +E+ E+ + + + +++LG++++++ G S Sbjct: 738 VPMVRRILQET-GLSPEYLDLEITESILMNDVDGAVERLVELHSLGIQLSIDDFGTGYSS 796 Query: 555 TSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTL 614 +++K+ ++ LK+ VR++ + + ++++ + V A G+ + + Q L Sbjct: 797 LAYLKKFPIQYLKIDRSFVRDVIIDPNDAAIATAVIDLARNMNLNVIAEGIEQQDQHQFL 856 Query: 615 IQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV 646 + RG GQG F+ P + ++ V Sbjct: 857 LDRGCGYGQGYLFSRPIPAHEFEQLLVRQQGV 888 >UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3H4_9PROT Length = 904 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 93/526 (17%), Positives = 205/526 (38%), Gaps = 24/526 (4%) Query: 133 SLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWP 192 S+ P + +R + G + +A R E + + Sbjct: 390 SIEALVPKSVNSAHSEHRSAYIEAPDRRLMLGGRTI--KALRKDGSECEVEI--NLSRVD 445 Query: 193 PRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKV 252 + + LR+I R R + I + D TGL NR +++ + + Sbjct: 446 TDQGVMIASALRDISERR----RAEGKIAELSFFDHLTGLPNRTLLMDRMKLAMTASYRD 501 Query: 253 GTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAAL 312 G H ++ I L +F L++T GH ++ + L + +AR +F L Sbjct: 502 GKHCALLFIDLDNFKALNETLGHEIGDQLLRDIAPRLVASVRE--DDTVARLGGDEFLVL 559 Query: 313 LPHRT------LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEH 366 L + E+I ++I+A+ + IG + + +++ Sbjct: 560 LVDLARTESEAANQVEAIGLKIIEALSQPYSLNNQHYVCTPSIGATLFFGHVVADDLLKQ 619 Query: 367 AESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQV 426 ++ A A +GG S +D + E + + Q L + L+ +P + G++ Sbjct: 620 SDLAMYKAKAEGGASIHFFDPKMEEAVIKRAKIEADLRQGLIKKQFLLHYQPQIFSNGRM 679 Query: 427 HHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP------EEN 479 E + R V ++++P+ + GL + + L W + Sbjct: 680 TGVEALVRWQHPVRGLVPPSDFIPLAEETGLILQLGNWVLEAACKQLAEWATRPELADLT 739 Query: 480 LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNAL 539 +A+ V+V+ +P F +++ + + + +R+ +EL E+ + +++ + + + A Sbjct: 740 VAVNVSVQQFHQPEFVDHIQEVI-RVTGANPERLKLELTESMLAENVQDIIKKMFALKAD 798 Query: 540 GVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQ 599 G+ +++ G S S++K+L ++ LK+ VR++ + + +++V Sbjct: 799 GIGFSLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDVLTDPSDATIAKTIVNLAQSLGLS 858 Query: 600 VYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYS 645 V A GV + ++ L G QG FF+ P++ + + +S Sbjct: 859 VIAEGVETEAQRNFLETSGCHSCQGYFFSRPLPIEEFEEYARRCWS 904 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 84/496 (16%), Positives = 186/496 (37%), Gaps = 14/496 (2%) Query: 154 AVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQH 213 V ++ LA E A + G+ ++ P + + T + N + Sbjct: 554 GVALIREALAANR--EVSAVVRNYRKDGALFWNQLFIAPVPNAEGVITHHIGVINDVTEL 611 Query: 214 SRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTW 273 R + A D T L NR ++L L ++ T V+ + L F ++D+ Sbjct: 612 IRYQEQLEYQANYDGLTRLPNRNLLRDRLEHALVVAQRHHTGVAVVFLDLDGFKNVNDSL 671 Query: 274 GHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RTLKEAESIAGQLIKAV 332 GHS + + L+ +AR+ +F ++ + + ++ ++ Sbjct: 672 GHSVGDRLLGVVAERLARCSR--TSDTVARHGGDEFVIVMTDTVDEQSLITWMERVRASI 729 Query: 333 DTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPE 391 + +G + G D E +M+ A+ A A G N++ Y + Sbjct: 730 AEPVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADVAMYRAKDMGRNTFQFYQPEMNA 789 Query: 392 KGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMP 449 + + + L L+ +P V GQ+ E + R D V + ++P Sbjct: 790 SAGARLNLERRLRRALRDNEFLLHYQPQVDIVSGQIVGIEALVRWHDPEAGLVPPSSFIP 849 Query: 450 MVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQ 504 + + GL + + W ++ L ++ ++ + + + L + Sbjct: 850 LAEESGLIGPLSEWVLREACRQNKAWQDQGLPPARVSVNLSARVFQQRNIAKLVMQVLAE 909 Query: 505 CEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVE 564 + + + +EL E+ + ++ ++ ++ALG+ +A++ G S S++K V+ Sbjct: 910 T-GLEPRYLELELTESTIMRNAEEAVLMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVD 968 Query: 565 LLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 LK+ V +I +++ + +++ QV A GV + ++ L +R QG Sbjct: 969 RLKIDRSFVSDIGVSGDDETITSAIIALAHSLKLQVIAEGVETSAQLDFLKERACDEMQG 1028 Query: 625 DFFASSQPLDTNVKKY 640 +FA + + Sbjct: 1029 FYFAKPLSTEGISELL 1044 >UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNS8_9GAMM Length = 944 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 119/599 (19%), Positives = 214/599 (35%), Gaps = 32/599 (5%) Query: 64 QITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLRLVY 123 + +++ SA+ + A + + S+ + V I Sbjct: 337 WLRDILSSAEDPGSRRSLRGLTLDVTAHRRAAAALKESENRYQDVVNHISEVIFRTDAEG 396 Query: 124 QDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQ------LAG---QELLETRATR 174 + + N +T + +G + Q L G + E R Sbjct: 397 RWTLLNPAWEALTGFKVEETLGQPMCAFVDPEDRDDAQSFCSTLLEGGTHAQSEEIRLRT 456 Query: 175 ILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNN 234 R ++ + A + +I + +E + IR A D TGL N Sbjct: 457 HDGSHRWVSIYASARFDEDGHIMATFGTMMDISDRKE----AEEEIRRLAFFDGLTGLPN 512 Query: 235 RLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMM 294 R ++L L + + HG V+ I L +F ++DT GH+ ++ + + + Sbjct: 513 RTLLHDRLGQALANTARTRHHGAVLFIDLDNFKDINDTLGHAVGDDLLCQVARRMENSVR 572 Query: 295 RYPGALLARYHRSDFAALLPHRTLK------EAESIAGQLIKAVDTLPNNKMLDRDDMIH 348 LAR +F +L EAE++ +LI + +R Sbjct: 573 E--ADTLARLGGDEFVIILNDLHPDPARAATEAEAVGRKLINLLREPFQLAGQNRHVTPS 630 Query: 349 IGICAWRSGQD--TEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQM 406 IG + SG+ E+V++ A+ A A G N+ YD L + Sbjct: 631 IGATLF-SGRSLGVEEVLKQADLAMYRAKNAGRNTVRFYDPELHRAVEARFELENELRHA 689 Query: 407 LSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQI 465 L + +P V EG+V EL+ R +S AE++P+ Q GL R + Sbjct: 690 LDEDRFSVVYQPQVDAEGRVIGAELLLRWEHAQRGAISPAEFIPVAEQTGLIVPIGRKVL 749 Query: 466 SRLIPLLRYWP------EENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAE 519 L W + L++ ++ P F LR+ L + + R+ +EL E Sbjct: 750 RTACAQLGAWQHTAAFRDLTLSVNISARQFRDPHFVPHLREILQET-GAPGDRLKLELTE 808 Query: 520 ADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKR 579 + + + I + I + ALGV A++ G S +++K+L + LK+ VR++ Sbjct: 809 SMLLEEIDTVVAHIDELRALGVEFALDDFGTGYSSLAYLKQLPLAQLKIDQSFVRDVLDD 868 Query: 580 TENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVK 638 + + Q +V V A GV + + L G QG + L + Sbjct: 869 PNDAAIAQMVVNLARTLDLDVIAEGVETVEQRAFLFGLGCRHFQGFLYGYPGDLADLER 927 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 92/490 (18%), Positives = 186/490 (37%), Gaps = 21/490 (4%) Query: 163 AGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRS 222 ET + T + L ++ R+I + + + I Sbjct: 617 QPLVYEETLTFAEDGYAGYFETIKTPIRDMHGHVTGLLSVSRDITD----RKKAEQQIEL 672 Query: 223 YAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQF 282 A D TGL NR ++L ++ G ++ I L +F L+DT GH + Sbjct: 673 LAFFDALTGLPNRRLLLDRLQRAGAACQRNEKLGALLFIDLDNFKDLNDTLGHDMGDRLL 732 Query: 283 FTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK------EAESIAGQLIKAVDTLP 336 + L + +AR+ +F +L +AE +A +L+ ++ Sbjct: 733 VQVAQRLQECVR--TSDTVARFGGDEFVVMLEGLDADTALAALQAEQVAEKLLAQLNRPF 790 Query: 337 NNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRG 395 IGI + + +++++ A+ A A G N+ +D + + Sbjct: 791 EMGAQQHYSTPSIGITLFGDQRRTVDELLKRADLAMYQAKAAGRNTQRFFDPDMQAQVTA 850 Query: 396 NVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NEEVSSAEYMPMVLQF 454 + + + Q ++R ++ +P V ++ E + R +S A+++P+ + Sbjct: 851 RSQLESDLRQGIARHELTVHLQPIVDGSTRLCGAEALVRWRHPVKGLISPADFIPLAEET 910 Query: 455 GLSEEYDRLQISRLIPLLRYWPEE------NLAIQVTVESLIRPRFQRWLRDTLMQCEKS 508 GL R + L W +A+ V+ +P F + TL + Sbjct: 911 GLILPLGRQVLQTACEQLVRWATHPATASFTIAVNVSARQFRQPDFVAEVLGTLAGT-GA 969 Query: 509 QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKL 568 +R+ +EL E+ + + + + +GV A++ G S S++K L ++L+K+ Sbjct: 970 NPQRLKLELTESLLLGDVEDTICRMAQLKRVGVGFALDDFGTGYSSLSYLKRLPLDLVKI 1029 Query: 569 HPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFA 628 VR++ + +V++++ QV A GV + + L G G QG F Sbjct: 1030 DQSFVRDVLTDPNDAAIVRTILALAKSLDLQVVAEGVETAGQLSFLKLHGCEGFQGYLFG 1089 Query: 629 SSQPLDTNVK 638 PL+ + Sbjct: 1090 RPVPLEAFER 1099 >UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BF2_DECAR Length = 1038 Score = 688 bits (1776), Expect = 0.0, Method: Composition-based stats. Identities = 89/493 (18%), Positives = 177/493 (35%), Gaps = 26/493 (5%) Query: 165 QELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLR----EIQNAREQHSRLDTLI 220 +E R + G + R T +I +E + I Sbjct: 544 KENGLWRGEIWNRRKNGEIYPEWLTISAVRGQHGEITHFVSSFLDITKRKE----AEEQI 599 Query: 221 RSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEE 280 + A D T L NR + +L+ L + H ++ I L +F M++D+ GH + Sbjct: 600 QFLALYDPLTHLPNRRLLNERLSKALTSSGRQRRHAALLFIDLDNFKMINDSMGHDIGDL 659 Query: 281 QFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK------EAESIAGQLIKAVDT 334 + L + ++R +F LL + + E IA +++ ++ Sbjct: 660 LLRQVALRLRESVR--SNDTVSRLGGDEFVILLEELSPNIHDATTQIEHIAQKMLDSLVQ 717 Query: 335 LPNNKMLDRDDMIHIGICAWRSG-QDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKG 393 IG + + E +++ A+ A A G N +D ++ + Sbjct: 718 PYKFGEFSHHCTASIGAIPFMDATETIESLLKSADMAMYKAKAAGKNRLFFFDPAMQTEV 777 Query: 394 RGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NEEVSSAEYMPMVL 452 + Q LY +P V + G V E + R + + E+ + Sbjct: 778 EARAALERDLRQAQREKQFVLYLQPQVDQSGHVSGAEALIRWQHPTHGLILPGEFTHVAE 837 Query: 453 QFGLSEEYDRLQISRLIPLLRYWP------EENLAIQVTVESLIRPRFQRWLRDTLMQCE 506 + L + + L W LAI V+ P F + + + Sbjct: 838 ETRLILPIGQWVLEEACKQLVIWQKNPDTAHLTLAINVSALQFRNPDFVDDVARAIHE-S 896 Query: 507 KSQRKRIIIELAEADVGQHISRLQPVIRLVN-ALGVRVAVNQAGLTLVSTSWIKELNVEL 565 + R+ +E+ E+ + + I ++++ LGV ++++ G S S++K+L ++ Sbjct: 897 GALASRLKLEITESLLLEDIDGTIERMQVLKNQLGVGLSLDDFGTGYSSLSYLKQLPLDQ 956 Query: 566 LKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGD 625 +K+ V++I + + ++++ S V A GV + + LI RG QG Sbjct: 957 IKIDRSFVKDIHCNPNDAAIAEAVIALGRSFSLNVIAEGVETIEQRDALIARGCLTFQGY 1016 Query: 626 FFASSQPLDTNVK 638 F P+D Sbjct: 1017 LFGRPGPIDAFPA 1029 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 688 bits (1776), Expect = 0.0, Method: Composition-based stats. Identities = 103/634 (16%), Positives = 216/634 (34%), Gaps = 16/634 (2%) Query: 22 TLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFSV--LRPQITELMMSADIVRVDL 79 L G + A + + Q + + ++ FS +R L + + Sbjct: 443 ELQGERIETVLAHEER-QRLRQQITQRLSENISIMHFSARLVRKDGQLLDVEIHSRLFEY 501 Query: 80 LHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAP 139 + + ++ + Y+ N + +T P Sbjct: 502 RGRSAIIGVVVDISDRVQADANQKLASKVFENAAEGILITGADYRIIAVNQAFTRITGYP 561 Query: 140 LTGAIGFIIVMLFLAVRWLQRQLAG-QELLETRATRILNGERGSNVLGTIYEWPPRTSSA 198 IG + + W L G + + + R + Sbjct: 562 PELVIGRVSRIFRDNTSWSVAMLDGLARHGHWQGEMLDRRRSHEWYPAELSISAVRDDAG 621 Query: 199 LDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIV 258 T + + + ++ A D T L NR + L ++ G V Sbjct: 622 AITNYVGVFADITVRKQAEERLQFLANHDPLTRLPNRSWLIACLEDRIQQIASSGQQVAV 681 Query: 259 MMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPH-RT 317 M + L F +++D++GH +E + L + +AR +F L+ H + Sbjct: 682 MFLDLDRFKLINDSFGHQTGDELLRETASRLEQVVGGRGQ--IARLGGDEFTLLVSHFAS 739 Query: 318 LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGL 376 ++A ++ + + + +GI + G D ++++A+ A A Sbjct: 740 QATLSTLAEDILAVLAQPLWLEGQELIVTGSLGISVYPHDGSDARTLLKNADVAMYRAKE 799 Query: 377 QGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRI 435 G N++ + + + ++ + Q L RG L+ +P V ++ E++ R Sbjct: 800 AGKNTYQFFAAEMNAQAIERLQLERGLRQALERGEFELHFQPIVAAATYRLEALEVLLRW 859 Query: 436 FDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESL 489 VS ++P+ + GL I + L W L AI ++ Sbjct: 860 RHPELGLVSPVRFIPLAEETGLIRPIGDWVIRQACRQLAEWDCLGLHVPRLAINLSARQF 919 Query: 490 IRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAG 549 + + L + R+ +E+ E+ V Q+ S ++ + ALGVR++++ G Sbjct: 920 EQQGLIMQVAGALAEA-GIAAGRLELEMTESMVMQNPSEAVSLLGELKALGVRLSIDDFG 978 Query: 550 LTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRS 609 S S++K ++ LK+ + + +N + ++++ S V A GV + + Sbjct: 979 TGYSSLSYLKRFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAMARKLSFSVVAEGVETEA 1038 Query: 610 EWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 + L +G QG F+ P QR Sbjct: 1039 QAAFLCAKGCQLLQGYLFSRPLPAAELPAFLQQR 1072 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 688 bits (1776), Expect = 0.0, Method: Composition-based stats. Identities = 84/453 (18%), Positives = 167/453 (36%), Gaps = 12/453 (2%) Query: 201 TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMM 260 LL E + + I A D T L NR +L LE ++ + V+ Sbjct: 413 ALLEETTQRMNEQELNEQRIEYLAHYDTVTKLPNRFSLMARLGQALELAKRFSSRLAVIF 472 Query: 261 IRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK- 319 I L F ++D+ GH + F + L + ++AR +F +LP Sbjct: 473 IDLDRFKNINDSLGHHIGDRLLFQVAGRLQDTIR--SADIVARLGGDEFVVVLPLINSNI 530 Query: 320 EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQG 378 A ++ + + + + + IGI + G+ +++M++A+ A +A G Sbjct: 531 SAAHAVRKIQQTLSQGYTVESHELNITPSIGISVYPTDGETVQELMKNADLAMYHAKSAG 590 Query: 379 GNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFD 437 NS+ + + + + + + L R L+ +P + G+V E + R Sbjct: 591 RNSYQFFTQEMNLTVQARLVLESDLRTALERDEMMLHYQPQIDLKSGEVVGVEALLRWRH 650 Query: 438 G-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIR 491 V+ ++P+ GL + L W + L A+ ++ + Sbjct: 651 PVRGAVAPDVFIPVAEDTGLILSIGEFALKSACEQLALWISQGLSPLRMAVNLSARQFKQ 710 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 L D L + +E+ E+ + +R + +GV +A++ G Sbjct: 711 SNLPSLLADILAAT-GVAAHLLELEITESSAMDDPNTAIVHLRTLREMGVELAIDDFGTG 769 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S S++K V LK+ VR I+ +E+ + + + +V A GV + ++ Sbjct: 770 YSSLSYLKLFPVNRLKIDRSFVRGIDTDSEDAEIAAATIALAHNLGKEVVAEGVETEAQC 829 Query: 612 QTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRY 644 + L + QG FF+ + Sbjct: 830 RFLRGQQCDILQGYFFSEPLSAAGIASYLAANR 862 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 688 bits (1776), Expect = 0.0, Method: Composition-based stats. Identities = 88/518 (16%), Positives = 199/518 (38%), Gaps = 50/518 (9%) Query: 171 RATRILNGERGSNVLGTIY---EWPPRTSSALDTLLREIQNARE---------------- 211 + +L+ + GS + + P + + +I + Sbjct: 413 QDEMLLSRKDGSPIWCEVTSKAIDPDDLAKGSIWITMDITERKAADVALARAHEDLELRV 472 Query: 212 -------------------QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKV 252 + + ++ A D TGL NRL + +L L D + Sbjct: 473 KERTKELAKANMDLLVEINERKMAEERVKHMALHDALTGLPNRLLLEERLENALSDAKSH 532 Query: 253 GTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAAL 312 V+ I L F +++DT GH + ++ + N L + +AR +F + Sbjct: 533 QWQLAVLFIDLDRFKLVNDTLGHHEGDQLLVEVANRLHQVIG--ANDTVARLGGDEFVIV 590 Query: 313 LPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESA 370 L E + + + + D IG+ + G+ Q+M++A++A Sbjct: 591 LNEIAGSTEINGVIEDIQQNFKPAVKLALQDMFVTPSIGVAIYPEDGETPVQLMKNADAA 650 Query: 371 TRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHR 429 +A G N ++ SL + + + + Q L G LY +P + + ++ Sbjct: 651 MYHAKASGRNCAQYFNRSLDDSLKERISLENALNQALKLGQFELYYQPQLDVKSNRIIGA 710 Query: 430 ELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQ 483 E + R +S ++P+ + GL + + + L W ++ +++ Sbjct: 711 EALIRWNHPEKGMISPDAFIPLAEESGLIVDIGSWVLHQASSQLAQWRKQGFDQLSVSVN 770 Query: 484 VTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRV 543 ++ + + F R + D + + + +EL E+ + ++ + ++ LG+++ Sbjct: 771 LSALQVQKESFAREVADVIREY-GVPEACLDLELTESMIMRNAEETIAALDKIHNLGIQI 829 Query: 544 AVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYAT 603 +V+ G S S++K ++ LK+ V++I T++ ++ ++++ + QV A Sbjct: 830 SVDDFGTGYSSLSYLKRFPLDKLKIDRSFVQDITVDTDDAMICKTIISMAHNLNLQVIAE 889 Query: 604 GVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 GV + ++ + L G QG FA P++ + Sbjct: 890 GVETNAQLELLRDYGCEQYQGYLFAKPLPVEQMTEHLL 927 >UniRef50_C5V069 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V069_9PROT Length = 734 Score = 688 bits (1776), Expect = 0.0, Method: Composition-based stats. Identities = 97/499 (19%), Positives = 192/499 (38%), Gaps = 22/499 (4%) Query: 159 QRQLAGQELLETRATRILNGERGSNVLGT-IYEWPPRTSSALDTLLREIQNAREQHSRLD 217 Q Q+ + R GE+ + T I L ++ +I + Q Sbjct: 240 QAQVVLTSGIALRGIDAALGEKWLRLTITGIRLAEEEEEEDLLVIVEDITKLKAQAVH-- 297 Query: 218 TLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQ 277 I A D TGL NR +++ +L + HG ++ I L +F L+DT GH+ Sbjct: 298 --IEQLAFYDSLTGLPNRSLLRDRVQRVLAHSARHKNHGAILFIDLDNFKALNDTKGHNI 355 Query: 278 VEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK------EAESIAGQLIKA 331 + + L + +AR +F +L +A+ I ++ + Sbjct: 356 GDLLLIEVAKRLQDCVRN--SDTVARMGGDEFVVVLEELNEDTQQAVAQAQDIGETVLAS 413 Query: 332 VDTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYDDSLP 390 ++ N + + IGI +R + + V +HA++A A G N+ +D + Sbjct: 414 LNRPFNLQGFEHYSSASIGISLFRDNEIGMDDVFKHADTAMYQAKTSGRNTLRFFDPDMQ 473 Query: 391 EKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NEEVSSAEYMP 449 + LS +L+ + + Q E + R VS +++ Sbjct: 474 ASLEARAVLEIDLRHALSLQQFKLFFQIQMNAANQPIGAEALLRWLHPKRGLVSPLDFIS 533 Query: 450 MVLQFGLSEEYDRLQISRLIPLLRYWP------EENLAIQVTVESLIRPRFQRWLRDTLM 503 + GL + + ++ W E LA+ V+ +P F +R L Sbjct: 534 LAEDTGLILPIGQWVLETACTQIKAWEANPLACELQLAVNVSARQFHQPDFVEQVRAALE 593 Query: 504 QCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNV 563 + + R+ +EL E+ V +I+ + + +GVR +++ G S S++ +L + Sbjct: 594 KT-GADPARLKLELTESVVLNNINDAVIKMSDLKEVGVRFSMDDFGTGYSSLSYLTQLPL 652 Query: 564 ELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQ 623 + LK+ V NI + + ++VQ+++ + +V A GV + ++ L + G Q Sbjct: 653 DQLKIDLSFVYNIGIKPTDAVIVQTIISMGNSLGMEVIAEGVETEAQRDFLERNGCHAYQ 712 Query: 624 GDFFASSQPLDTNVKKYSQ 642 G F+ + + Sbjct: 713 GYLFSKPVSIGEFEGLIRR 731 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 687 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 80/496 (16%), Positives = 187/496 (37%), Gaps = 16/496 (3%) Query: 155 VRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHS 214 +R R+ +L + + + + + +L ++ + Sbjct: 324 LRAAIREQRPASVLLRNYHKDGSMFLNELYIAPVSDTSGGAVGHFVGVLYDVTQIK---- 379 Query: 215 RLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWG 274 R + A D TGL NR + + L + ++ I L +F +++D+ G Sbjct: 380 RYQEDLEHQANYDTLTGLANRNLLNERTQQALLQARRHDHFLSLVFIDLDNFKLVNDSMG 439 Query: 275 HSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA-ESIAGQLIKAVD 333 H +E + + L T + G +AR +F LL ++++ ++ + ++ + Sbjct: 440 HGAGDELIANVGSRLQTCVR--DGDTVARIGGDEFVLLLTNQSVSDSNAGVMQRIQAELI 497 Query: 334 TLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK 392 + + +G+ + G+D+E ++ +A++A A G N++ Y + Sbjct: 498 KPMWIRGQEIVVTCSMGVARFPEDGEDSESLLANADTAMYRAKSSGRNNFQFYTKEMNAT 557 Query: 393 GRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG-NEEVSSAEYMPM 450 + + + L L +P + R+G V E + R ++ +++PM Sbjct: 558 SGERLSLESDLWHALKNDELFLVYQPQIDLRDGTVIGMEALIRWQHPKRGLIAPMDFIPM 617 Query: 451 VLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQC 505 GL + +E L AI ++ L F ++ + + Sbjct: 618 AECNGLIIPIGIWVLETACRHNLQLQKEGLPPIRVAINLSARQLSDRNFVESVQSVI-EA 676 Query: 506 EKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVEL 565 + +E+ E+ V ++ + + +N +G++++++ G S +++K ++ Sbjct: 677 IGLDPHYLELEVTESMVMHNVEDVVVTLNDLNKMGIQLSLDDFGTGFSSLAYLKRFPIDR 736 Query: 566 LKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGD 625 LK+ + N + + ++ Q+++ G +V A GV L + G GQG Sbjct: 737 LKIDQSFIFNCDSDPGDAIIAQTIIALAHGLKIKVIAEGVEKSEHLSFLKKNGCDEGQGY 796 Query: 626 FFASSQPLDTNVKKYS 641 F + D Sbjct: 797 FISRPLTFDDLRMFLL 812 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 95/503 (18%), Positives = 182/503 (36%), Gaps = 15/503 (2%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F W Q G E R + ++ S L +I +E Sbjct: 557 FYQKMWQQLAQRGHWAGEIWNRRKDGTIYPEWLSISLLRDEAGQVSHHVALFSDISERKE 616 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 Q + IR A D T L NR ++LA + + V+ + L F ++D Sbjct: 617 Q----EAHIRHMAEHDFLTDLPNRALIHDRLAQAIRAAARQKNRLAVLFLDLDHFKNIND 672 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIK 330 T GH+ +E + L + + R +F ++P + EA +A +L+ Sbjct: 673 TLGHAHGDELLKQVAQRLQHTVR--GSDTVGRNGGDEFVLIVPELASPAEAAQLAQRLLD 730 Query: 331 AVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSL 389 + IGI + G + ++++ A+ A +A QG N + + L Sbjct: 731 DLRRPFQIDGQALAISTSIGISLFPDNGSELQELLVSADLAMYHAKAQGRNRYQFFTPEL 790 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQ-VHHRELMCRIFDGN-EEVSSAEY 447 + + + Q L R L +P + + + E + R +S A + Sbjct: 791 NAQVAERLTLENHLRQALERQQLYLVYQPQFAIDNRRLVGCEALLRWQHPEQGLISPARF 850 Query: 448 MPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN----LAIQVTVESLIRPRFQRWLRDTLM 503 +P+ + GL E R + W +A+ V+ L +P + L Sbjct: 851 IPLAEETGLIVEIGRWVLDEACRQAAAWLAAGTPLRVAVNVSARQLGQPDLLAEVEAALA 910 Query: 504 QCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNV 563 + + + +E+ E+ + + + ++ G+ +AV+ G S +++K + Sbjct: 911 R-HRLPSCWLELEVTESTLMEDAEQAVRHLQAFKERGIHLAVDDFGTGYSSLTYLKRFSP 969 Query: 564 ELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQ 623 +L+K+ V N+ ++ +V ++V+ Q A GV S + L Q G Q Sbjct: 970 DLIKIDRAFVMNLPDNRDDAAIVSAIVQLAEALGMQTLAEGVESEEQLDFLAQAGCDVVQ 1029 Query: 624 GDFFASSQPLDTNVKKYSQRYSV 646 G Q + + SV Sbjct: 1030 GYLTGRPQSAGELTAQLAGANSV 1052 >UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZY7_SULD5 Length = 586 Score = 686 bits (1772), Expect = 0.0, Method: Composition-based stats. Identities = 106/525 (20%), Positives = 198/525 (37%), Gaps = 26/525 (4%) Query: 135 MTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGT---IYEW 191 T ++ + +L ++R + +E + E V+ + Sbjct: 69 STLEASKESLVHSEITQWLPHELIERMQRLAQGVEDSIMVEMGIENSGGVVPLEFVLQYL 128 Query: 192 PPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEK 251 L ++I R ++ I + A D T L NR +++A L ++ Sbjct: 129 SFGEDDYFVILGKDISERR----HAESTIHTLAFFDPLTHLANRQLLHDRMAQALAKSQR 184 Query: 252 VGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAA 311 G ++MI L +F L+DT GH +E + + T + G LAR +F Sbjct: 185 HHKVGALLMIDLDNFKALNDTKGHHIGDELLIQVAQRIQTIVRE--GDTLARISGDEFVV 242 Query: 312 LLPHRTLKE------AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQ--DTEQV 363 LL +E AE A ++ ++ + IGI + +GQ E + Sbjct: 243 LLEGLAHEESKAAQEAEKFATRVKYLLNEPYELLGYEHTCSSSIGIALF-NGQPKSKETL 301 Query: 364 MEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE 423 ++ A+ A A +G N YD + E + LS+ L+ +P V E Sbjct: 302 LKQADIAMYQAKEKGRNRICFYDPLMQENIEHKTTMEHELRMALSKEELILFYQPQVNLE 361 Query: 424 GQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW------P 476 G++ E + R + ++P+ + GL + R L W Sbjct: 362 GKIVGVEALLRWNHPQKGLIPPNTFIPLAEETGLIIPVGSWVLHRACQQLSEWKKDFPHQ 421 Query: 477 EENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLV 536 +L+I V+ + F + + + S I +EL E+ + I I + Sbjct: 422 PLHLSINVSAKQFQEASFYETVANAIA-LSGSDAGSIKLELTESLILDSIHETIAKIEAL 480 Query: 537 NALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGT 596 LGV +++ G S S++K L ++ LK+ VR+I + ++V++++E Sbjct: 481 RLLGVGFSLDDFGTGYSSLSYLKRLPLDELKIDQSFVRDIGHDNNDAMIVKTIIEMAHNF 540 Query: 597 STQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 V A GV + ++ L++ G QG F P + + + Sbjct: 541 DLDVIAEGVEDKEQFNFLMENGCGLFQGYLFGKPMPPEELERLFL 585 >UniRef50_C6WW34 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WW34_METML Length = 623 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 115/622 (18%), Positives = 230/622 (36%), Gaps = 34/622 (5%) Query: 51 THLVSNDFSVLRPQITELMMSADIVRVDLLHGDKQVYTLARN-------GSYRPVGSSDL 103 L+ +D + L+ + HG + + +N PV Sbjct: 3 HILIVDDKEENLYYLQALLTGNGYMVELARHGAEALVKARQNPPQLIVSDLLMPVMDGYT 62 Query: 104 FR---ELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQR 160 + L K P + Y +P + L + L + Sbjct: 63 LLRHWKSDTKLKKIPFIVYTATYTEPEDEKLALSLGADAFILKPCEPEDFLARFIDVLVK 122 Query: 161 QLAGQELLETR---ATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLD 217 +A + + + ++ + E + A L ++I +E + Sbjct: 123 GVAASPDIASEVNSGHSDTLKDYSVILIRKLEEKTLQLEEANQFLQQDIARRKE----AE 178 Query: 218 TLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQ 277 I+ A D+ T L NRL ++L L + HG ++ I L F L+DT GHS Sbjct: 179 DKIQHLAYYDLLTNLPNRLLLIDRLQHTLAMSARHQNHGALLFIDLDHFKTLNDTKGHSV 238 Query: 278 VEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK------EAESIAGQLIKA 331 + + L T M G LAR +F +L + +AE++ ++I A Sbjct: 239 GDLLLVEVAKRLQTCMRE--GDTLARLGGDEFVVILQDLSEDSSQAAVQAETVCAKIISA 296 Query: 332 VDTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYDDSLP 390 ++ +G+C +R+ + +++++ A+ A A G N+ YD ++ Sbjct: 297 INLPYYLDSYLYHSSTSVGVCLFRNQEFTVDELLKRADIAMYQAKSAGRNTQRFYDPTMQ 356 Query: 391 EKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMP 449 + + + + RLY + V G VH E + R V +++P Sbjct: 357 AALEARAALESDLRLAIKKNQFRLYYQMQVDHSGNVHGAEALIRWQHPQKGLVPPLQFIP 416 Query: 450 MVLQFGLSEEYDRLQISRLIPLLRYW------PEENLAIQVTVESLIRPRFQRWLRDTLM 503 + + GL + ++ W +A+ V+ P F + L Sbjct: 417 LTEETGLIIPIGHWVMETACAQIKRWESDPLTRNLQVAVNVSACQFHDPSFVERAIEMLS 476 Query: 504 QCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNV 563 + K + + +EL E+ V ++ ++ + + GV +++ G S S++ +L + Sbjct: 477 R-HKIKPGNLKLELTESLVLDNVEEAIMKMQALKSYGVLFSMDDFGTGFSSLSYLTKLPL 535 Query: 564 ELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQ 623 + LK+ +RN+ + ++VQ+++ + +V A GV S ++ + L Q Q Sbjct: 536 DQLKIDQSFIRNMCMNNRDAVVVQTIIGMANNLGIEVIAEGVESETQREFLEQNKCNLCQ 595 Query: 624 GDFFASSQPLDTNVKKYSQRYS 645 G F+ P+D K Q ++ Sbjct: 596 GYLFSQPLPIDAFENKLRQIHA 617 >UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY96_DESAC Length = 904 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 101/636 (15%), Positives = 223/636 (35%), Gaps = 25/636 (3%) Query: 17 LTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFSVLRPQITELMMSADIVR 76 L++F L + +Y + V + + + + +P + Sbjct: 281 LSVFFATLISAGGVIIIFRYLTQRSLNTVLQMTEAAFRNTEPARYKPTLVSEFNILGHSI 340 Query: 77 VDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMT 136 VDL H K + + SS + +I + + V + L Sbjct: 341 VDLDHQRK------ESEKQLLLSSSVFDNAVEGIVITNLDGIIEQVNPACEAMSGYRLKE 394 Query: 137 TAPLTGAIGFIIV--MLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPR 194 I F W G+ E R NV + Sbjct: 395 LIGENPRIFRSDHHNSAFYQQMWQSLIEEGRWEGEVWNRRKNGEVYPLNVSISRCTNSAG 454 Query: 195 TSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGT 254 S + +I + R + ++ A D T L NR F ++L+ + + T Sbjct: 455 IPSHYVAIFHDISEIK----RSEEKLQHQAYHDALTNLPNRKLFHDRLSVAVAHARQHKT 510 Query: 255 HGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLP 314 V+ + + +F ++D+ GH ++ ++ L + + AR +F L+P Sbjct: 511 KLAVIYLDIDNFKYINDSLGHHYGDKLLQQISERLLSCTRQE--DTTARLGGDEFIILMP 568 Query: 315 HR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQD-TEQVMEHAESATR 372 + + +++K ++ D + +G+ + D E ++++A+ A Sbjct: 569 EIEDPHDITVLCRRILKQLELPHALSGRDYTVNVSMGVTVFPDDADTPEDLIKNADIAMY 628 Query: 373 NAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHREL 431 A G N + ++ ++ + + + L R L+ +P V V E Sbjct: 629 RAKEAGKNGYQLFTAAMQQTIMQRIELEARLSDALCRNEFVLFYQPQVDLESEHVIGAEA 688 Query: 432 MCRIFDGNE-EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE-----NLAIQVT 485 + R + V E++P+ + GL + D + W E+ +++ ++ Sbjct: 689 LIRWQKPDGQLVYPDEFIPIAEECGLITQIDHWVLKAACRQANKWREQSGRNFKMSVNLS 748 Query: 486 VESL-IRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVA 544 E + +++ L + + + +E+ E V ++ + ALGV +A Sbjct: 749 SEQFAKDQELVQRVKNVLNKT-GLPAECLTLEVTENAVMSDTESAIAIMTQLTALGVSIA 807 Query: 545 VNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATG 604 ++ G S S++K LK+ V++I +++ + S++ + +V A G Sbjct: 808 IDDFGTGYSSLSYVKNFPARYLKIDRSFVKDIPGDSDDMAIAASIISLGRNLNMEVIAEG 867 Query: 605 VRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 V +++ L Q QG F+ + +++ Sbjct: 868 VEEQTQIDFLKQHRCQQVQGYFYGKPCAAEFFSQQF 903 >UniRef50_Q220B0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q220B0_RHOFD Length = 701 Score = 685 bits (1770), Expect = 0.0, Method: Composition-based stats. Identities = 111/630 (17%), Positives = 224/630 (35%), Gaps = 48/630 (7%) Query: 41 RVQAVATA--IDTHLVSNDFSVLRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPV 98 + A A + ++ F + +E + V +A Sbjct: 89 FITAFAADEVLARAKLTEPFGYILKPFSE-------------RELRTVLEMALYKHQADS 135 Query: 99 GSSDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTT---APLTGAIGFIIVMLFLAV 155 + D R L + L Q + + ++ T AP + +++ Sbjct: 136 QARDAARHTQAILDGMVDGVITLNAQGLITSINQAVSTLFGYAPEELLGHNVAMLMPSPH 195 Query: 156 R-----WLQRQLAGQELLETRATRILNGERGS----NVLGTIYEWPPRTSSALDTLLREI 206 R +L+R R ++G+R + ++ E + L+ +I Sbjct: 196 RSLHGGYLRRHQHTGAGCAMGQGREVDGQRRDGSVFPISVSVSELMHNGQTQFIGLVHDI 255 Query: 207 QNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDF 266 Q R + I A D TGL NR ++L L + G HG ++++ L F Sbjct: 256 T----QRRRSEENIYRLAFYDKLTGLPNRRLLMDRLKQALITSTRTGQHGALILLDLDHF 311 Query: 267 NMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK------E 320 +++T+G +E + L T + ++R+ +F +L + + + Sbjct: 312 KQINETFGLDAGDELLQQVGQRLPTCVR--DDDTVSRFGGDEFMVMLEALSSQPQEAAIQ 369 Query: 321 AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGG 379 AE+IA +++ A+ + IG+ +R Q + +++ + A A G Sbjct: 370 AEAIAQKILLALAQPYRLRGHTHGTTPSIGVVMFRQAQVSLDDLLKMTDVAMYQAKAAGR 429 Query: 380 NSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG- 438 N+ +D +L + + L+ L+ + V +G E + R Sbjct: 430 NTVRFFDPALQALALARTALEENLRRGLALQEFVLHYQIQVDHQGLPTGAEALLRWQHPV 489 Query: 439 NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN------LAIQVTVESLIRP 492 V A+++P+ + G + + L W + LA+ V+ +P Sbjct: 490 RGMVPPAQFIPLAEETGFILPLGQWVLESACRQLVAWSHQRATGSWTLAVNVSALQFAQP 549 Query: 493 RFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTL 552 F + L + + +EL E+ + + + + + A GV A++ G Sbjct: 550 DFVAHVTSALQATS-ANPTLLKLELTESMLVGDVQDVITKMNALKAQGVSFALDDFGTGY 608 Query: 553 VSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQ 612 S S++K L ++ LK+ VR++ + ++ Q++V QV A GV + + Sbjct: 609 SSLSYLKRLPLDQLKIDQSFVRDLLINPNDAVIAQTIVALGHNLGLQVIAEGVETVGQHD 668 Query: 613 TLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 L G QG +F P Q Sbjct: 669 YLASIGCDAFQGYYFGRPVPAAELACLLKQ 698 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 685 bits (1770), Expect = 0.0, Method: Composition-based stats. Identities = 85/590 (14%), Positives = 205/590 (34%), Gaps = 28/590 (4%) Query: 74 IVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHS 133 + + L Q + + +S + +++ N Sbjct: 56 VSLLLLFGVYAQTMLKRQQQIMESLQASKQKIRQIIDTANDAFITIDAEGSISDWNPMAE 115 Query: 134 LMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELL---------ETRATRILNGERGSNV 184 ++ P AIG ++ L + + + + + G Sbjct: 116 MIFGWPEDLAIGKSMMDLIMNQAPRNALIDDIQEFINTGSAPFTQGQIVITALHRDGHEF 175 Query: 185 LGTIYEWP--PRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQL 242 + P S + +R+I + +L+T A +D TGL NR +++ L Sbjct: 176 PAEMSISPQAVGASFIFNIFVRDISQRKADEEKLET----LATRDELTGLINRFSYNHLL 231 Query: 243 ATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLA 302 + ++ V+ + L F ++D+ GH ++ N LS + +A Sbjct: 232 KKEVALAKRHMESLAVLFLDLDGFKNINDSLGHDVGDQLLRETANRLSACIRE--SDTVA 289 Query: 303 RYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDT 360 R +F ++P + + + +++ + + IGI + G + Sbjct: 290 RIGGDEFLIIMPGIKDVHDPRFLCERILNMIGQPYLIGTQECFVGASIGISLYPLDGDNV 349 Query: 361 EQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV 420 E ++++A++A A G N++ + ++ E+ + + + + +L +P V Sbjct: 350 ESLVKNADTAMYQAKDSGRNAYKFFTPAMGEEAFKRMEMERALRYAIEKNQFKLLYQPQV 409 Query: 421 TRE-GQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE 478 G++ E + R +S + ++ ++ L + + W Sbjct: 410 ELSSGRILGVEALLRWTHPEWGPISPSVFISLIENTNLILPIGEWVLDEACKQNKAWQAL 469 Query: 479 ------NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPV 532 +A+ + + L Q + + +E+ E I Sbjct: 470 HPGFPLRMAVNFAARQFAQADLVETVAKAL-QKSGLAAEFLELEITEGSAMNDIELNIRK 528 Query: 533 IRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEA 592 ++ + LGV +A++ G S +++K +++LK+ + I+ ++ +V ++ E Sbjct: 529 MQALKELGVSIAIDDFGTGFSSLAYLKRFPIDILKIDKSFLDEIQHGKKDAAIVATISEM 588 Query: 593 CSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 +V A GV ++ + + L G QG F+ P + + + Sbjct: 589 AHSLGMEVIAEGVETKYQLEFLRGHGCDMIQGYLFSRPVPPEQIAEILQK 638 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 84/495 (16%), Positives = 184/495 (37%), Gaps = 16/495 (3%) Query: 157 WLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRL 216 W L E + R + V + T + ++ +E + ++ Sbjct: 143 WESDILYDGWEGEVLSRRRDGYDFWWAVTVSTVCDSDNTVTNYVISGVDVSELKEANRKM 202 Query: 217 DTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHS 276 + A D TGL NR F ++L ++ + ++ + L F ++DT GH Sbjct: 203 ----QQMALYDSLTGLANRRLFVDRLEQAVKAASRDRKQIALLFLDLDQFKRINDTLGHD 258 Query: 277 QVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTL 335 + T+ L + +AR +F LL +A Q++KA+ Sbjct: 259 AGDSLLQTVAQRLKNCVR--AKDTVARLGGDEFTVLLTDIVDTFSVTPVATQILKALKEP 316 Query: 336 PNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGR 394 K + IG+ G + + +M++A+ A A G + + Y + L Sbjct: 317 IKLKKHEVIVSTSIGVTLAPTDGANADVLMKNADLALYRAKEHGRDRYHFYTEELNAHAL 376 Query: 395 GNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFDG-NEEVSSAEYMPMVL 452 + + L L +P V G++ E + R V ++ + Sbjct: 377 KQLLMEQELRHALQFEEFTLGFQPQVNLTTGKIVSVEALIRWHHPSKGLVMPDSFISVAE 436 Query: 453 QFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEK 507 + GL R + ++ + +A+ ++ P+ ++ + + L + Sbjct: 437 ETGLINPIGRWVLKNACMQMKMLQDLTGSAIKIAVNLSARQFDDPKLEQSIEEALNET-G 495 Query: 508 SQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLK 567 + + + +E+ E+ + I + ++ + GV +A++ G S S++K+L V LK Sbjct: 496 LEPEWLELEVTESMLMGDIQAVTNKLKRLRQTGVSLAIDDFGSGYSSLSYLKKLPVNALK 555 Query: 568 LHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFF 627 + VR+I + + + + +++ +V A GV + + + L+ QG FF Sbjct: 556 VDREFVRDIPEDSNDMEITSAIIAVAHKLQLKVVAEGVETAEQKEYLLANQCDFAQGYFF 615 Query: 628 ASSQPLDTNVKKYSQ 642 + + ++ Sbjct: 616 SKPLSFEDLYIYLNE 630 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 85/481 (17%), Positives = 179/481 (37%), Gaps = 11/481 (2%) Query: 169 ETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDV 228 E + G P + + + T ++ + T + A D Sbjct: 850 EWHGEFHNKKKNGELFWEAASISPIKNAEGIITHFVAVKEDITERKAQQTTLTYQANYDA 909 Query: 229 KTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNL 288 TGL NR ++L + ++ VM I L F ++DT GH + ++ Sbjct: 910 LTGLPNRFLAIDRLKQAILQADRQKKRVAVMFIDLDHFKDVNDTLGHEYGDLLLQKVSQR 969 Query: 289 LSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMI 347 L + + +AR +F +LP+ + IA +++ +++ N + Sbjct: 970 LKQCLRK--SDTVARLGGDEFLIILPNLRETHHCKLIASKILSSLEKPFNLLTEEAFISA 1027 Query: 348 HIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQM 406 IGI + G D +M +A++A G N + Y + E+ + +R L+ Sbjct: 1028 SIGITLYPDDGNDVSVLMRNADAAMYLGKRGGRNDFKFYTMGMNEEAQSRLRIEKLLRYA 1087 Query: 407 LSRGGPRLYQKPAVTREGQ-VHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQ 464 L + L +P + Q V E + R + VS +++ + + GL E Sbjct: 1088 LKKNEFYLVYQPIIDLRFQTVIGAEALLRWNNPELGRVSPDQFISIAEETGLISELGAWV 1147 Query: 465 ISRLIPLLRYWPEEN----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEA 520 IS+ + W + +A+ ++ + + + + + +E+ E Sbjct: 1148 ISQACQEVVNWQTQGSPIWVAVNLSPRQFRESKLLEIISNAIT-LNGITNHYLELEITEK 1206 Query: 521 DVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRT 580 + + + +I ++ + R++++ G + S++ + LK+ + +I Sbjct: 1207 LLLEDFPGSKGIIEQLHEMDFRLSIDDFGTGYSALSYLIKFPFNRLKIDRSFIADIPHNQ 1266 Query: 581 ENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 E LV++++ G QV A GV + + L G QG FF+ + + Sbjct: 1267 EVLALVKTIIAMGHGLKLQVIAEGVETTEQANILEAEGCDYAQGYFFSRPLLSEEFRRYL 1326 Query: 641 S 641 Sbjct: 1327 Q 1327 >UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacteria RepID=A2SDI4_METPP Length = 1006 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 95/503 (18%), Positives = 194/503 (38%), Gaps = 22/503 (4%) Query: 158 LQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSA----LDTLLREIQNAREQH 213 +++ L +E+ R + L G + I P + +++ AR Sbjct: 507 VEQCLQDREVYGVRESAALRHRSGRDYGVQISAAPIAGRDGRVLGAVMVFQDVTEARG-- 564 Query: 214 SRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTW 273 L + A D TGL NR+ F +++ + + G V+ + L F ++D+ Sbjct: 565 --LAQKMSYLAHHDGLTGLPNRVLFQDRVHQACQSGRRHGRRFAVIFMDLDHFKHVNDSL 622 Query: 274 GHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL---KEAESIAGQLIK 330 GH+ +E + L+ + + R +F LL +A ++++ Sbjct: 623 GHAVGDELLKAVAQRLTGALR--ASDTICRLGGDEFVVLLSDLDDVEVDGVAEVAKKILR 680 Query: 331 AVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSL 389 V + + +GI + G+D + +M+ A++A + +G N + + ++ Sbjct: 681 QVAQPCVLGGTEVNVGASLGIALFPGDGEDPDTLMKRADAAMYRSKREGRNRYHFFSKAV 740 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFD-GNEEVSSAEY 447 + ++ + + L+ G ++ +P V R E + R G S A + Sbjct: 741 DDAASARLQLEADMRRALAAGQFIVHYQPVVHGRTRDAVAVEALLRWDRAGQGLQSPAVF 800 Query: 448 MPMVLQFGLSEEYDRLQISRLIPLLRYWPE-----ENLAIQVTVESLIRPRFQRWLRDTL 502 +P+ + GL + + LR W ++A+ V+ L + F + D L Sbjct: 801 IPVAEESGLIVPMGHWVLRQACEQLRAWSGTALGGISVAVNVSPVQLAQADFVDTVADVL 860 Query: 503 MQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELN 562 R+ E+ E+ + Q ++R + LGVR+A++ G S +K Sbjct: 861 HAT-GVDGSRLEFEITESTLMQDPEATLEMLRRLKGLGVRIAIDDFGTGYSSLGHLKRFP 919 Query: 563 VELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGG 622 V+ LK+ VR++E +++ LV++++ V A GV + ++ L Sbjct: 920 VDTLKIDHTFVRDLEADADDRELVRAILAMARSLRLHVVAEGVETEAQAAILAAMECPAF 979 Query: 623 QGDFFASSQPLDTNVKKYSQRYS 645 QG FA R + Sbjct: 980 QGYLFARPAGAAVTAAWLQDRAA 1002 >UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47UD6_COLP3 Length = 921 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 92/543 (16%), Positives = 216/543 (39%), Gaps = 14/543 (2%) Query: 111 LIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIV--MLFLAVRWLQRQLAGQELL 168 ++ P M L+ + +GFI L + + + QL Sbjct: 364 VVVTPQMVAINSASKVSNLILMLLIAIMIIAAFLGFIYCRRSLIMPIYQMVNQLQRPVTE 423 Query: 169 ETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDV 228 + L +R + G + ++ ALD+ R+++ + + + ++ A D Sbjct: 424 GGQVYPELLDDRRQDEFGLLAYHFNQSKMALDSNNRDLKLQINERKQAEYQLKHLALHDP 483 Query: 229 KTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNL 288 TGL NRL F ++L + ++ V + L +F +++DT GH +E ++ Sbjct: 484 LTGLPNRLLFQDRLEQAIALSDRHQHKFAVFFMDLDNFKIINDTMGHDAGDELLKQVSLR 543 Query: 289 LSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIKAVDTLPNNKMLDRDDMI 347 LS + +AR +FA ++ +++A + A +L + T + + Sbjct: 544 LSCTGRKT--DTVARLGGDEFAFIITKVNTIEDAVTFAQRLNSLLKTPIEINGNNINMGS 601 Query: 348 HIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQM 406 IGI + ++E+++ +A+ A A G N+ + + + + N T + + Sbjct: 602 SIGITIYPDDAANSEELLRNADIAMYQAKDDGRNTVRFFTSEMNARLQRNKEVLTDLAES 661 Query: 407 LSRGGPRLYQKPAVTREGQV-HHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQ 464 L++ LY +P T + + E + R + +++ + + GL E Sbjct: 662 LTKEHFELYYQPLFTIDQNILVGAEALIRWHHPEKGMIPPDQFIAVAEKSGLINELGDWV 721 Query: 465 ISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAE 519 +++ ++ + + AI ++ R + + L Q + I +E+ E Sbjct: 722 LAQACREIKNFLNAGITVFKVAINISPVQFRRKDLLQHMLMILAQ-HDVSAELIELEITE 780 Query: 520 ADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKR 579 V ++ + ++ ++ G ++A++ G S S++K ++ +K+ + ++E Sbjct: 781 GAVMDNVDQAIETMQALHDAGFQLAMDDFGTGYSSLSYLKRFPIQKVKIDRSFISDLEND 840 Query: 580 TENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKK 639 +++ + ++++ V A GV + + L QG + P +K Sbjct: 841 DDSKSITTAIIQMSHSLGLHVLAEGVETEEQLHYLQAEKCDYVQGYYTGRPIPASEFIKN 900 Query: 640 YSQ 642 +S+ Sbjct: 901 FSE 903 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 87/504 (17%), Positives = 189/504 (37%), Gaps = 16/504 (3%) Query: 149 VMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQN 208 F A W G E R NGE L R + + + N Sbjct: 438 DASFYATMWKHLVGEGHWSGEI-WDRRRNGEIFPKWLA---ISAIRNRQGVISHFVGVFN 493 Query: 209 AREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNM 268 + + + D T L NR+ F ++L + E+ ++++ L F + Sbjct: 494 DISRQKSTEQQLERLVFYDPLTQLPNRVLFRDRLIHEVGVAERSNKLMSLLLVDLDRFKI 553 Query: 269 LSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQ 327 ++DT GH +E ++ L + + +AR +FA +LP ++A +A Sbjct: 554 INDTLGHGVGDELLLQVSKRLIASVRK--SDTVARLGGDEFAIILPGMERAEDAAHVAET 611 Query: 328 LIKAVDTLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYD 386 +I + + + + IGI + G D + + +A++A A G ++ + Sbjct: 612 IINQLQVPFSIEENELFVGASIGIAVHGQDGDDYDSLTMNADAAMFKAKESGKGTYKFFT 671 Query: 387 DSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDG-NEEVSS 444 + + + + + + L+ +P V Q+ E + R + Sbjct: 672 PDMNIQNAKRLVMEAELRRAVDNQELMLHYQPKVDAESRQIVGMEALVRWVHPTRGVIPP 731 Query: 445 AEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLR 499 E++P+ + GL L ++R ++ W + L A+ ++ P + Sbjct: 732 GEFIPLAEETGLIVPLGELVLTRACAQVKQWWDMGLPQVQVAVNLSPRQFQEPNLIEKVS 791 Query: 500 DTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIK 559 + L + + +E+ E+ + ++ + LGVR++++ G S S++K Sbjct: 792 EILRKT-GFPATGLELEITESIAMHDVDNTIETVKKLKDLGVRISIDDFGTGYSSLSYLK 850 Query: 560 ELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGV 619 + + LK+ VR++ + ++ S++ + V A GV + + + L + Sbjct: 851 KFPLHALKIDQSFVRDLGGDDDGASIISSIISMAKAMALGVVAEGVETAQQMEFLRGQEC 910 Query: 620 TGGQGDFFASSQPLDTNVKKYSQR 643 QG F + P + ++ Sbjct: 911 QQVQGFFLSKPLPPSDFLALLERQ 934 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 684 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 80/515 (15%), Positives = 191/515 (37%), Gaps = 40/515 (7%) Query: 157 WLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE----- 211 + +L + + R + + + + + + +I + Sbjct: 572 LARVRLGSVDQGQWTFQRKDGEKFIVELSISALHPEDKKAQGFLFVASDITERKRAEDAL 631 Query: 212 -----------------------QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLED 248 + R+++ +R A D TGL NR +L +++ Sbjct: 632 LRSRDELELRVKERTSELESEVLERRRIESKLRYLAHHDALTGLANRTLLQQRLGEAMDN 691 Query: 249 QEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSD 308 + T ++ I L F ++D+ GH + + + L+ + +AR + Sbjct: 692 AAQDDTKVAILFIDLDRFKTINDSLGHHIGDTLLKNVASRLTETLR--SNDTIARLGGDE 749 Query: 309 FAALLPHRTLKE-AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEH 366 F +LP + + A +A +++ A+ + IGIC + G +M + Sbjct: 750 FMIILPLKANEALAGKLASKILDALRPPIRIDGHELFVTPSIGICFYPNDGVTVNALMRN 809 Query: 367 AESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQ 425 A++A A G N++ + + + + + + + R ++ +P + + Sbjct: 810 ADTAMYQAKANGRNTYCYFTAEMNAAADNYFQIESDLRRAVDRNEFEVFYQPVIDLKTHR 869 Query: 426 VHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN----- 479 + E + R V A+++ + + GL E + + + LR W +E Sbjct: 870 ITSYEALVRWRHPTKGLVGPAQFITVAEESGLIGEIGTIVLRQACSQLRSWIDEGFTSPI 929 Query: 480 LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNAL 539 LA+ ++ P + L + RI +E+ E + Q ++ +++ Sbjct: 930 LALNLSPIQFNDPNLTEGICRILRDYD-LTPDRIELEITETVIMQDGELALGTLQNLSSR 988 Query: 540 GVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQ 599 G R++++ G S +++K V+ LK+ + ++ ++ +V +++ + Sbjct: 989 GFRLSIDDFGTGYSSLAYLKRFPVDTLKIDRSFITDMTANENDRAIVTAIMALANSLHLS 1048 Query: 600 VYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLD 634 V A GV ++ ++ L QG + A P + Sbjct: 1049 VIAEGVETKEQYDLLSALNCNFAQGYYMAKPMPAE 1083 >UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHS3_CELJU Length = 856 Score = 683 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 95/594 (15%), Positives = 214/594 (36%), Gaps = 44/594 (7%) Query: 59 SVLRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMS 118 + + Q EL+ + ++ L ++ + +G + L+ P Sbjct: 293 TAVSEQTRELVNARAQLQATLDAIPDLLFEVGSDGIIYQFHT-----RRPELLLVPPEAF 347 Query: 119 LRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNG 178 + + + M + + ++ +A + A+ G Sbjct: 348 IGKAFSEFMPDEVNQVIWSAMEEADATGFSEGKYYALEM------------------PGG 389 Query: 179 ERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFF 238 R + + L R+I +E + I + A D T L NR Sbjct: 390 RRDFELSVASKAGKEKGIQRYVMLSRDITERKEN----EARINNLAFFDPLTQLPNRRLL 445 Query: 239 DNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPG 298 ++L + ++ G ++ I L DF L+D GH + + + L + Sbjct: 446 QDRLEHAIATGQRQAALGALLYIDLDDFKTLNDNRGHHVGDLLLIAVADRLRHSLRHE-- 503 Query: 299 ALLARYHRSDFAALLPHRTLKE------AESIAGQLIKAVDTLPNNKMLDRDDMIHIGIC 352 + R +F +L + + IA +++++++ + + + IGIC Sbjct: 504 DTVGRLGGDEFLVILEGLSNDRDQAAQQVQQIAEKILQSLNQVYVLDEQEYFNSPSIGIC 563 Query: 353 AW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGG 411 + D E +++ A+ A +A G N+ +D + + I + L Sbjct: 564 LFGDDDADIEDLLKRADQAMYHAKAAGRNTLRFFDPHMQASAAQRFALQNEIREALLFNQ 623 Query: 412 PRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIP 470 +LY +P V R G++ E + R +S +++P+ + GL + Sbjct: 624 FKLYYQPQVDRTGRITGAEALIRWLHPERGMISPMDFIPIAEESGLILPLGNWILDAACQ 683 Query: 471 LLRYWPE------ENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQ 524 L +W + L+I V+ +P F + + + + ++ +EL E+ + Sbjct: 684 QLIHWKQNPLTAALTLSINVSARQFQQPDFVTQVLAAVTRT-GANPHQLTLELTESILAT 742 Query: 525 HISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQL 584 + + + + + G++ +++ G S S++K L + LK+ V +I + Sbjct: 743 NQQDIITKMDALKSHGIKFSLDDFGTGYSSLSYLKRLPINELKIDKSFVNDILTDPNDAA 802 Query: 585 LVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVK 638 + + ++ V A GV ++ + L Q G QG +F + ++ Sbjct: 803 IARMVIRLAQSMELNVIAEGVETQRQRDWLEQEGCLHYQGYYFGKPVGAEEFLR 856 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 683 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 85/483 (17%), Positives = 187/483 (38%), Gaps = 17/483 (3%) Query: 163 AGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRS 222 G E R + + + + ++ +I + R + + I+ Sbjct: 571 RGVWRGEGRGKQKNGNGFDVELQAQVVKDQNGGPLSILASAIDITDKR----KTELQIKK 626 Query: 223 YAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQF 282 A D TGL NR + + L ++ V+++ L +F ++DT GH+ + Sbjct: 627 LAYFDSLTGLPNRTLLKDHMELALGQARRLNKFVAVLLLDLDNFKHINDTLGHATGDLLI 686 Query: 283 FTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL-KEAESIAGQLIKAV-DTLPNNKM 340 ++ L T LAR+ +F LL + S + + + + Sbjct: 687 RSVAERLRTECR--TCDTLARWGGDEFVLLLTDLDDIQNTTSATEKFMALLTERPFATSE 744 Query: 341 LDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRW 399 D + IGI + GQD E +++ A++A A G N + + L E+ R Sbjct: 745 CDINTTASIGIALYPQDGQDPETLLKRADTAMYEAKKNGRNGYHFFSLQLAEQAERRHRM 804 Query: 400 RTLIEQMLSRGGPRLYQKPAVTREG-QVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLS 457 + L G +L +P + ++ E + R +S A ++P+ + GL Sbjct: 805 EINLRSALKEGEMQLVYQPQIDLGKVRITGMEALLRWQSPEEGTISPARFIPLAEETGLI 864 Query: 458 EEYDRLQISRLIPLLRYWPE-----ENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKR 512 + + W + +A+ ++ + +P + ++ L + Sbjct: 865 YPLGEWVLQQACRQGAIWQKTEASPLCVAVNLSAKQFHQPDLAKNIKKILRET-GLSPHL 923 Query: 513 IIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGL 572 + +E+ E+ +++ + + LGV+ +++ G S S++K+L ++ +K+ Sbjct: 924 LELEITESVFLENMEAAIEALTELKKLGVQFSIDDFGTGYSSLSYLKKLPIDRIKIAQEF 983 Query: 573 VRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQP 632 VR+I+ ++ ++++ + ++ A GV + + L+ G QG +FA P Sbjct: 984 VRDIDTDDGDKAIIKATIAMAKSLGMKLIAEGVENHQQLAFLLLHGCHAMQGYYFAKPMP 1043 Query: 633 LDT 635 Sbjct: 1044 AQE 1046 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 683 bits (1763), Expect = 0.0, Method: Composition-based stats. Identities = 92/499 (18%), Positives = 186/499 (37%), Gaps = 18/499 (3%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F W + GQ E R + + +S + ++ ++ Sbjct: 259 FYQHMWRELIEKGQWRGEIWNRRKNGEVYPEWLSISGVSDARGQTSYYVGVFTDLSQLKQ 318 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 ++L++ A D T L NRL ++L LE E+ T V I L F ++++ Sbjct: 319 SEAKLES----LAYYDPLTALPNRLLLHSRLEHALEWAERHQTKVGVYFIDLDQFRVVNE 374 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIK 330 + + ++ ++ + + LAR +F + +EA A +L+ Sbjct: 375 SLSYQAGDQLLVMVSKRFLSCLR--VDDTLARPGGDEFVLIQEALADPQEATETARELLA 432 Query: 331 AVDTLPNNKM-LDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDS 388 ++D + IGI + G ++++AE+A +A G N ++ Y + Sbjct: 433 SLDQPFQLDGGQEIYLGASIGITVFPGDGTTPPDLLKNAEAAMYHAKENGRNRFSFYAEQ 492 Query: 389 LPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR--EGQVHHRELMCRIFDGNE-EVSSA 445 + ++ + Q + LY +P V E + R + ++ Sbjct: 493 MNADALARLQMEMALRQAVENRELLLYYQPQWQLADSPSVIGAEALIRWRNKEGELIAPD 552 Query: 446 EYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRD 500 +++P+ + GL I LR W ++ +A+ V+ + Sbjct: 553 QFIPLAEKSGLIGAIGDWVIDEACRQLRIWRDQGKKQLRVAVNVSARQFRAGNLAEVVAQ 612 Query: 501 TLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKE 560 L + E +EL E+ + + ++ ALGV +A++ G S +++ Sbjct: 613 ALRKHE-IPAHCFELELTESILMEKPEEAAELLNRCAALGVGIALDDFGTGYSSLAYLSR 671 Query: 561 LNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVT 620 + +LK+ VR++ R+E L+ S++ QV A GV + + L RG Sbjct: 672 FPITVLKIDRSFVRDLNHRSEAALIADSIIALAHRMGLQVVAEGVETEEQRAYLQSRGCD 731 Query: 621 GGQGDFFASSQPLDTNVKK 639 QG F+ P + + Sbjct: 732 LAQGFLFSPPLPAEQFAEF 750 >UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellular organisms RepID=Q5P8Z7_AZOSE Length = 1008 Score = 682 bits (1762), Expect = 0.0, Method: Composition-based stats. Identities = 98/495 (19%), Positives = 187/495 (37%), Gaps = 16/495 (3%) Query: 155 VRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHS 214 RWL+ +L+ V + + T + +I + +E + Sbjct: 479 QRWLEMLRQHGSVLDFETLGCERNGAVRQVSLSSRYIDIDGEKHVLTFVHDITDRKEAQA 538 Query: 215 RLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWG 274 R I A D TGL NR+ F ++ A E+ ++ + L F ++DT G Sbjct: 539 R----IEYLAHHDALTGLPNRVLFRDRFALATAWAERAHAKVALLFVDLDHFKTINDTLG 594 Query: 275 HSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIA-GQLIKAVD 333 H + + L + ++R +F L +A + A ++ + Sbjct: 595 HPVGDGLLQGVALRLRECLRET--DTVSRLGGDEFLIALTDIRDPQAINSATAKIFDTLT 652 Query: 334 TLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK 392 + + + + IGI W G+D + ++++A++A A G N+W Y + + Sbjct: 653 RPFELEGHELTNTMSIGIAIWPDDGEDFDTLLKNADTAMYQAKRAGRNTWRFYTEQMNAN 712 Query: 393 GRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIF-DGNEEVSSAEYMPM 450 ++ RT + L L+ +P + G V E + R D E V ++P Sbjct: 713 AVEQLQLRTALHSALENDEFLLHYQPQINLASGHVVGVEALLRWHWDKRELVPPDRFIPA 772 Query: 451 VLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQC 505 + GL + W + L A+ ++ R +R + L Sbjct: 773 AEESGLIVPIGDWVLREACMQAVRWTRQGLPELTIAVNLSAVQFRRGDLERSVVRALS-L 831 Query: 506 EKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVEL 565 R+ +EL E+ + + +R + +LGVR++++ G S +++K V+ Sbjct: 832 SGLDPARLELELTESLLLVDTESVIETLRRLKSLGVRLSIDDFGTGYSSLAYLKRFAVDK 891 Query: 566 LKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGD 625 LK+ VR+I ++ +V+++V QV A GV S + L QG Sbjct: 892 LKIDQSFVRDIATDPDDAAIVRAIVSMAHTLKLQVIAEGVESEDIDRFLHIFNCDEAQGY 951 Query: 626 FFASSQPLDTNVKKY 640 +A P D + Sbjct: 952 HYARPMPGDALAEWL 966 >UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionella ferruginea ES-2 RepID=C5V4D4_9PROT Length = 925 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 111/577 (19%), Positives = 216/577 (37%), Gaps = 20/577 (3%) Query: 77 VDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMT 136 V + H + Y L LF +L ++ + + N Sbjct: 355 VMVFHDVSKRYALLDELGAARAQFETLFEQLPEGVLLFDESLAVITHNREAANLLEYASD 414 Query: 137 TAPLTGA--IGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPR 194 L I + +A R + QL G + E+R R +G + P Sbjct: 415 ALLLLQVSDIEAMDDQNAIAARKEKLQLTGIDNFESR-YRTRSGRLMDVDVSVQVVQLPN 473 Query: 195 TSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGT 254 A TL R+I + I A D TGL NR ++L+ + + Sbjct: 474 GRIAFQTLFRDITE----QKQTSAQIEHLAYHDQLTGLPNRRLLKDRLSQAVSSVVRRDA 529 Query: 255 HGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLP 314 +M + L F ++D+ GH + + L + LAR +F LL Sbjct: 530 KLALMYLDLDHFKDVNDSLGHGAGDVLLQIVAERLQGCVR--ADDTLARMGGDEFVLLLN 587 Query: 315 HRT-LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATR 372 + SIAG++I + + +GI G+D + ++++A+ A Sbjct: 588 GVNGADDVASIAGKIIHELSQPMRIGNDELRITPSLGISMCPQDGRDADDLLKYADVALY 647 Query: 373 NAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHREL 431 A QG ++ Y +L ++ V+ L+ L R LY +P V +G++ E Sbjct: 648 QAKQQGRATYRFYTQALHDQSVERVQLERLLRHALERNEFELYYQPQVDLCDGRIIGCEA 707 Query: 432 MCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN----LAIQVTV 486 + R +VS A ++P+ Q GL + + + + W ++ ++ V+ Sbjct: 708 LIRWNHPGMGQVSPARFIPIAEQSGLIIDIGNWVMKQACHQAKRWHDQGWDIKVSFNVSA 767 Query: 487 ESL-IRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAV 545 + LRD L + R+ +EL E+ + + ++ + ALG+++A+ Sbjct: 768 RQFMRSGELMQSLRDALAE-SGVDPTRMEVELTESLLL-DPQGMGEILHEIRALGIQLAL 825 Query: 546 NQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGV 605 + G S S+++ + +LK+ V + ++ +V++++ + A G+ Sbjct: 826 DDFGTGYSSLSYLRRFPISILKIDRSFVSAADNNADDAEMVKTIIGMAHNLRMSLIAEGI 885 Query: 606 RSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 + ++ L +G GQG ++ P Q Sbjct: 886 ETNAQRDMLETQGCEVGQGYHYSCPVPATEFSLLLQQ 922 >UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Cyanothece RepID=B7JWK6_CYAP8 Length = 1143 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 97/547 (17%), Positives = 205/547 (37%), Gaps = 25/547 (4%) Query: 106 ELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQ 165 + L +P +++LVY PM ++F L + ++ + G Sbjct: 601 KTRQSLYLNP--AIQLVYGRPMEDFFR----DPHLWLCMVHPEDQELVSHHLKLLEDKGS 654 Query: 166 ELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAA 225 + R R R + + S +D + +I + + ++ A Sbjct: 655 TEVHYRIIRPDGETRWLHSRSRLVYDEQGKSLRIDGINSDITE----RKQAEEQLQYNAT 710 Query: 226 QDVKTGLNNRLFFDNQLATLLEDQEKVGTH-GIVMMIRLPDFNMLSDTWGHSQVEEQFFT 284 D T L NRL F ++L LE + + V+ + L +F +++D+ GH+ +E Sbjct: 711 HDTLTQLPNRLLFMDRLEHALERRRRYSDPLFAVLFLDLDEFKVINDSLGHALGDELLRE 770 Query: 285 LTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDR 343 + L + LAR +F LL +K+A IA ++ K + N + + Sbjct: 771 IARRLQKSLR--ADDTLARLGGDEFTILLEEIHDVKDAIKIAERIHKDLTRPFNLEGQEI 828 Query: 344 DDMIHIGICAWRSG-QDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTL 402 IGI + +++ A++A A G +AI+D + ++ T Sbjct: 829 FTNTSIGIALSNGEYEAASEILRDADTAMYRAKAGGKACYAIFDQQMHASAVSRLQLETD 888 Query: 403 IEQMLSRGGPRLYQKPAVTREG-QVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEY 460 + + + R +Y +P ++ + + E + R V A ++P+ + GL Sbjct: 889 LRRAIERQEFLVYYQPIISLQHDTLTGFEALIRWQHPQQGLVPPARFIPIAEETGLIVPI 948 Query: 461 DRLQISRLIPLLRYWPEE-------NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRI 513 + + L+ W + +++ ++ + L + L + E + Sbjct: 949 GEWILEQAAQQLKIWQTQYRNYESLKMSVNLSSKQLRDASLLGTIDRILSKTE-IDNNAL 1007 Query: 514 IIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLV 573 +E+ E+ + +++ V+ + + + ++ G S S++ V LK+ V Sbjct: 1008 KVEITESILMENVQVAADVLIALRERNIEICLDDFGTGYSSLSYLHRFPVNTLKIDRSFV 1067 Query: 574 RNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 + EN +V+++V ++ A G+ + + L G GQG FFA Sbjct: 1068 MRMRPNDENSEIVRAIVSLAHILGMEIIAEGIETELQLAQLKWIGCEQGQGYFFAKPLAT 1127 Query: 634 DTNVKKY 640 Sbjct: 1128 SEVEALL 1134 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 88/492 (17%), Positives = 183/492 (37%), Gaps = 21/492 (4%) Query: 165 QELLETRATRILNGERGSNVLGTIYEWPP-----RTSSALDTLLREIQNAREQHSRLDTL 219 +E A + GS +Y P + ++I R+ L+ Sbjct: 329 RERCPGYAILRNYRKDGSLFWNELYVAPVPDPHGGEPRYFVGVQKDITEIRQYQEALE-- 386 Query: 220 IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVE 279 A D TGL NR ++ + + + V I + +F ++D+ GHS + Sbjct: 387 --RQANYDTLTGLANRNLLKERMQQAISEARRHNWTFSVAFIDIDNFKRVNDSMGHSAGD 444 Query: 280 EQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAES-IAGQLIKAVDTLPNN 338 E L L + + G +AR +F LL ++L E+ + ++ + Sbjct: 445 ELIRLLGQRLQSCLR--DGDTVARLGGDEFVLLLTSQSLDESIHTVVQRIRNTIINPFII 502 Query: 339 KMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNV 397 IG+ + G++ + ++ +A+SA A G N++ Y + + + Sbjct: 503 TGRQLTVTCSIGLANFPHDGRNADTLLSNADSAMYQAKASGSNNFRFYAKEMNAELGHRL 562 Query: 398 RWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFG 455 + L L+ +P V R Q+ E + R + +++P+ G Sbjct: 563 SLENDLWHALENQQLVLHYQPQVCMRNSQIIGMEALIRWQHPKLGMIPPLQFIPLSEDDG 622 Query: 456 LSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQR 510 L + R +A+ ++V L + + TL Q Sbjct: 623 LIVPIGIWVMETAAHQNRQLQLAGYPPIRVAVNLSVRQLEQKDLVHCIEKTL-QHSGLDP 681 Query: 511 KRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHP 570 + + +E+ E+ + +I + ++ LGV+++++ G S S++K L + LK+ Sbjct: 682 QCLELEITESMLMHNIEESIITLNRISDLGVQLSLDDFGTGYSSLSYLKRLPINRLKIDK 741 Query: 571 GLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASS 630 + +I + ++ +S++ QV A GV S ++ L++ G QG + Sbjct: 742 SFINDITTTYNDAIIARSIIALAHSLEIQVIAEGVESADQYAFLLENGCDEVQGYLLSRP 801 Query: 631 QPLDTNVKKYSQ 642 +P + Sbjct: 802 RPFEEMEALLRD 813 >UniRef50_A1AMG1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AMG1_PELPD Length = 718 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 101/588 (17%), Positives = 218/588 (37%), Gaps = 39/588 (6%) Query: 87 YTLARNGSYRPVGSSDLFRELSVPLIK------HPGMSLRLVYQDPMGNYFHSLMTTAPL 140 Y + ++R + +S+ + L + +P + + + + + + + Sbjct: 123 YIFRSSRAFRDLRTSEARLSKAQQLARMGSWEWNPLLDVVQLSEPCRQ--IMGIDSATQV 180 Query: 141 TGAIGFIIVMLFLAVRWLQRQL-----AGQELLETRATRILNGERGSNVLGTIYEWPPRT 195 I + L +L++ L G+ L T + E + E R Sbjct: 181 RDIASLIALAHPLGRPYLRKGLDALMERGRPLSLDCQTATADEEDKRFIHLEAEE--HRD 238 Query: 196 SSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTH 255 +S TL+ + IR A D TGL NR+ F L L E+ Sbjct: 239 ASGRITLVSGTIQDITSRKLAEEKIRYLAYYDSLTGLPNRVLFKEHLRRALATSEQHKRQ 298 Query: 256 GIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALL------------AR 303 +M++ L F ++D+ GH + + + L + P + AR Sbjct: 299 LAIMLLDLDRFKGINDSLGHDAGDLLLQQVADRLR--LRVRPYDTVSRDSEEQRDSLIAR 356 Query: 304 YHRSDFAALLPHRT-LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTE 361 +F LL T + A +A ++I+A++ + IGI + G D E Sbjct: 357 LGGDEFTILLEGITTPEAAARVARRVIEALEAPFALNGNEVFISCSIGISIYPHDGTDLE 416 Query: 362 QVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT 421 ++++A+ A A G +++ Y + + T + + + L+ +P + Sbjct: 417 ILVKNADVAMYCAKDLGCSTFQFYTQEMNSVSLQRLILETHLRKAFEKEEFFLHYQPQID 476 Query: 422 -REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN 479 ++ E + R + VS ++P+ + GL DR ++ + L W Sbjct: 477 CVTNRIIGLEALARWNNPELGLVSPGSFIPLAEETGLIIALDRWVLATVCKQLEAWQAAG 536 Query: 480 L-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIR 534 + A+ ++ ++ + ++ + R + +E+ E + ++ + V+ Sbjct: 537 IPLVRVAVNLSARHFLKANLNKTIQQI-RSRGAAARDHLDLEITEGMLMENAEEVVSVLG 595 Query: 535 LVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACS 594 ++ GV ++++ G S S++ L LK+ + E+ +V +++ Sbjct: 596 MLQETGVNISIDDFGTGYSSLSYLTRLPFHTLKIDRSFISQSGDNVESASVVTAIIALAH 655 Query: 595 GTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 +V A GV + ++ Q L + G QG F+ P D + + Sbjct: 656 SLGKEVVAEGVETSTQLQFLKENGCRVIQGYLFSRPLPEDKIRELLRE 703 >UniRef50_C4LDT9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LDT9_TOLAT Length = 753 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 91/502 (18%), Positives = 188/502 (37%), Gaps = 23/502 (4%) Query: 151 LFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAR 210 + VR R Q + R ++ G+R + + L R+I + + Sbjct: 256 ILATVRDSLRLQQTQTIEYERDFKM--GQRLVEGRAQPLGYTVNNKQVVIFLARDITDRK 313 Query: 211 EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLS 270 + + I A D TGL NR ++L + ++ G ++ I L +F L+ Sbjct: 314 IK----EDEIAWLAFYDPLTGLPNRRLLQDRLHQAMAGSKRSGQRAALLFIDLDNFKTLN 369 Query: 271 DTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE--AES----I 324 DT GH + + + L + +AR +F +L E A + + Sbjct: 370 DTLGHDKGDLLLQQVATRLFECVREC--DTVARLGGDEFVVMLEELNHSEELAAAQSKMV 427 Query: 325 AGQLIKAVDTLPNNKMLDRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWA 383 +++ + + + IGI + + ++++M+ A+ A A G N+ Sbjct: 428 GEKILVKLCQPYLIAGYEHNSSASIGITLFLAHQESSDELMKRADIAMYQAKSAGRNTLR 487 Query: 384 IYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NEEV 442 +D+ + + + L + L+ +P V G++ E + R V Sbjct: 488 FFDNKMQAIVTSRAELENDLREGLRQQQLLLHYQPQVDVHGRIIGAEALVRWQHPSRGMV 547 Query: 443 SSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE------NLAIQVTVESLIRPRFQR 496 S A ++P+ + GL ++ LR W + +A+ ++ + +P F Sbjct: 548 SPAHFIPLAEESGLILSLGDWVLNEACRQLRRWAAQPAMAHLTMAVNISARQIHQPDFVD 607 Query: 497 WLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTS 556 + + Q + +EL E+ + + + + + A GV +++ G S + Sbjct: 608 QVLAAI-HTAGVQPYHLKLELTESLLLEDTEEIILKMTALKACGVGFSLDDFGTGYSSLA 666 Query: 557 WIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQ 616 ++K L ++ LK+ V ++ + + S++ V A GV + ++ Q L Sbjct: 667 YLKRLPLDQLKIDKSFVHDLLTDPNDAAIASSIITLAQSLGLNVIAEGVETEAQRQRLEA 726 Query: 617 RGVTGGQGDFFASSQPLDTNVK 638 G QG F P D Sbjct: 727 LGCYTYQGYLFGHPVPADMLFA 748 >UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Acidovorax RepID=A1TLA7_ACIAC Length = 850 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 111/594 (18%), Positives = 207/594 (34%), Gaps = 30/594 (5%) Query: 66 TELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLRLVYQD 125 E + + V +L + + AR S + S + + + H L + Sbjct: 266 GEWLRTFSDVTPHMLLQSELRLSEARFRSLCDLSSDWYWEQDAEHRFVHFNQGLNGLGIA 325 Query: 126 PMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVL 185 + + R + LE + T +V Sbjct: 326 VDEAVGRTRWELGAPNLSAEDWAE-----HRRVLAARQPFRDLELQRTAADGRVSWVSVS 380 Query: 186 GTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATL 245 G + R+I R+D I A D TGL NR ++L Sbjct: 381 GIPVFSADGAFLGYRGVGRDITE----RKRVDAEIERLAFFDPLTGLPNRRLLTDRLRRA 436 Query: 246 LEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYH 305 + + +HG ++ + L +F L+DT GH + L G ++R+ Sbjct: 437 IGTAARERSHGALLFLDLDNFKDLNDTLGHDMGDRLLVQAAQRLLAC--AGAGDTVSRFG 494 Query: 306 RSDFAALLP------HRTLKEAESIAGQLIKAVDTLPNNKML-DRDDMIHIGICAWRSGQ 358 +F L HR +A +A ++ A+ + IG+ + G Sbjct: 495 GDEFVVLAEGLPGDMHRARADAAVLANRITAALGRPYAVGGMGHHHSTPSIGLALFGGGT 554 Query: 359 DTEQ----VMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRL 414 +++HA+ A A G N+ +D S+ + + + L L Sbjct: 555 GDGAGVDDLLKHADLAMYQAKAAGRNTIRFFDPSMLQAVLARAALESELRLALESDELLL 614 Query: 415 YQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLR 473 + +P V +G + E + R V E++P Q GL + + R L Sbjct: 615 HYQPLVNGDGSMLGAEALVRWRHPQRGLVMPGEFIPAAEQGGLIVALGQWVLERACAQLV 674 Query: 474 YWP------EENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHIS 527 W + LA+ V+V +P F L TL + +Q + + IEL E+ + + Sbjct: 675 AWSRSAATAQLVLAVNVSVRQFRQPDFVDQLLQTLRR-SGAQPRLLKIELTESLLMADVE 733 Query: 528 RLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQ 587 + + + A GV A++ G S +++K L ++ LK+ VR++ + +V+ Sbjct: 734 DVIARMEQLRAHGVGFAIDDFGTGYSSLAYLKRLPLDQLKIDQSFVRDVLTDPNDAAIVR 793 Query: 588 SLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 +++ +V A GV + + + L + G QG F P + Sbjct: 794 TILALARSLDLEVVAEGVETTGQLKFLQRHGCKAFQGHLFGRPAPAAVLERALR 847 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 77/504 (15%), Positives = 183/504 (36%), Gaps = 17/504 (3%) Query: 151 LFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAR 210 F + E R N + + + ++ +I + Sbjct: 600 EFYQHIRDSLNTSAFWRGEIWNRRKDNHIIPLICSISAVRNDKQQLTHYVSVYSDISKLK 659 Query: 211 EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLS 270 + + A D T L NR L+ ++ + ++M+ L F ++ Sbjct: 660 AS----EAKLAHLAHHDPLTQLPNRTLLTINLSHAIDLAVRNHHRIALLMLDLDRFKDVN 715 Query: 271 DTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLP-HRTLKEAESIAGQLI 329 D++GH + + + R +F L+ + L + E A ++ Sbjct: 716 DSFGHQIGDALLQEVAR--RLRRRVRISDTICRLGGDEFTVLIEGNPALHDVEHFAEDIL 773 Query: 330 KAVDTLPNN-KMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDD 387 + + + + IGI + GQ +++++ A++A A G + + + D Sbjct: 774 QLLKDPFSLPNGREVIIGASIGISLYPEHGQTPKELLQQADAAMYRAKAHGRSCFRYFSD 833 Query: 388 SLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG-NEEVSSA 445 L + +++ L LY +P + ++ E + R D + +S A Sbjct: 834 ELTRAAEQRLDLEVRLQRALRLNELCLYFQPQIDISSNRIIGAEALVRWQDPAHGLISPA 893 Query: 446 EYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRD 500 +++P+ + GL ++ + + W ++ L A+ ++ + + Sbjct: 894 QFIPVAEETGLIKQLGEWVLLEACRQGKEWQQKGLPAINLAVNISPVQFRNSNILESVFN 953 Query: 501 TLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKE 560 L Q + +EL E+ + H + ++ + G+R+A++ G S +++K Sbjct: 954 ALKQT-GYPASLLELELTESALMTHENEAVEILSALRKYGIRLAIDDFGTGYSSLAYLKR 1012 Query: 561 LNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVT 620 +++LK+ V +I + ++ + ++V +V A GV + + L ++G Sbjct: 1013 FPLDVLKIDKSFVDDIPHKKDDMEIAAAIVAMAHTLRLKVLAEGVETEEQLTFLKEQGCD 1072 Query: 621 GGQGDFFASSQPLDTNVKKYSQRY 644 QG + P D + + Sbjct: 1073 CYQGYLMSPPVPADQFEQLLRAQA 1096 >UniRef50_Q1N453 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Bermanella marisrubri RepID=Q1N453_9GAMM Length = 800 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 98/654 (14%), Positives = 229/654 (35%), Gaps = 39/654 (5%) Query: 10 FVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFSV-----LRPQ 64 V ++ + + L + + K ++ A A I D+S+ ++ + Sbjct: 158 LVFIVMVTVLSLLLSLALAKYLQHLLVKPIQKIAATARDITR---KQDYSLRAEREVKDE 214 Query: 65 ITELMMSADIVRVDL-LHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLRLVY 123 + E++ + + + + + + +F+ I + + Sbjct: 215 LGEMVDVFNSMLSKIEQERSDLTSSEEKFRQLASLSPVGIFQINLKHDITYVNNRWSDIT 274 Query: 124 QDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELL--ETRATRILNGERG 181 N + AVR + + + E R + Sbjct: 275 GIRQPNATLEHWLSHIRQEDRRA-------AVRAWRNLIENHQEFVVEVGFERNRDQITW 327 Query: 182 SNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQ 241 + + ++ + +I + + +++ A D TGL+NR F ++ Sbjct: 328 AIIEASVLYDGQGEIYGYMGAISDITDLKVAQLQMEN----LAFFDPLTGLSNRRLFKDR 383 Query: 242 LATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALL 301 L + + ++ G+ ++ + L F ++D+ GH + L + + Sbjct: 384 LHKSISESKRRGSFVALLFLDLDQFKRINDSLGHDAGDVLLEETARRLENSVRE--SDTV 441 Query: 302 ARYHRSDFAALLPHRTLKE-AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQD 359 +R +F LL IA +++K V K + + + IGI G D Sbjct: 442 SRIGGDEFTVLLNDVENTHGVRHIAEKILKKVCRPIMVKNQEIINTVSIGITLAPTDGDD 501 Query: 360 TEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGG-PRLYQKP 418 +M +A+ A A G N++ + + + ++ G + + + +Y +P Sbjct: 502 VNTLMRNADMAMYQAKAMGRNNYQFFSEEMNKEMMGYLEIEKDLRHSIDYPEDFIIYYQP 561 Query: 419 AVTR-EGQVHHRELMCRIFDGNE--EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRY- 474 + G+ E + R + ++P+ + GL I + ++Y Sbjct: 562 KIELHSGRFVGAEALIRWK-PEGKDMIPPDRFIPIAEESGLIVPIGAHVIRQACLQVKYM 620 Query: 475 -----WPEEN-LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISR 528 WPE+ +AI ++ P L++ L Q K + E+ E+ + ++ Sbjct: 621 INTGIWPEDGKVAINLSARQFSDPDLICKLQEILEQT-KCPVHVLEFEITESTLMDNVEN 679 Query: 529 LQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQS 588 +R + +G+ +A++ G S +++K +++LK+ V +I + + + Sbjct: 680 AIFTMRQIKEMGISIAIDDFGTGYSSLAYLKRFPIDVLKVDRSFVMDIPNDLNDMEITAA 739 Query: 589 LVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 ++ QV A G+ ++ + L GQG A P D + + Sbjct: 740 VIAMAHKLHLQVVAEGIETQEQIDFLKSNYCEYGQGFMIARPMPSDELERFIQR 793 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 680 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 93/537 (17%), Positives = 203/537 (37%), Gaps = 21/537 (3%) Query: 120 RLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQR-----QLAGQELLETRATR 174 RL Y + G L T ++ + R L + G E A Sbjct: 289 RLRYLNRAGRAVLGLTATEDVSSRHIAQCHPEWATHRLLMEAFPTARRDGAWQGEIAARL 348 Query: 175 ILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNN 234 E + + + T+ R+I + +R A D TGL N Sbjct: 349 ADGREIPVSQVVLAHGGANEMPEFFSTIARDITE----RKHFEQELRRQATHDALTGLPN 404 Query: 235 RLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMM 294 R+ ++Q+ ++ + V+ + + +F ++++ GH+ + L + Sbjct: 405 RILLEDQIEAVVAHSARSHKLASVLFLDIDNFKRINESLGHAAGDAMLRHAAQRLRDCVR 464 Query: 295 RYPGALLARYHRSDFAALLPHRTL-KEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICA 353 P ++ARY +F +L + +I ++ A +T + +G+ Sbjct: 465 --PTDVVARYGGDEFTIVLGDLSHVDNIPAILHKVRAAFETPLVISGQEVYASFSVGVSV 522 Query: 354 WR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGP 412 + G D ++++A++A + G N + Y + +G+ + T + + L RG Sbjct: 523 YPHDGDDGATLLKNADTAMYRSKASGRNRYQFYAPEMNARGQELLSLETDLRRALDRGEF 582 Query: 413 RLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIP 470 RL+ +P + R+ ++ E + R ++ +++P++ GL + Sbjct: 583 RLHYQPQLDLRDNRIAGVEALLRWKHPRDGVIAPGDFVPLLEDTGLIVPVGEWVLRNACT 642 Query: 471 LLRYWPEENLA-----IQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQH 525 R E +A + V+ R + L + E + +E+ E+ Q Sbjct: 643 QYRACRESGVAPVRISVNVSARQFREDTLLRQVEQVLRE-ECMPPHHLELEITESTAMQD 701 Query: 526 ISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLL 585 ++ ++ ++ALGVR+A++ G S +++K ++ LK+ +R+ + + Sbjct: 702 VAATGDILAALDALGVRLAIDDFGTGYSSLAYLKRFPLDALKIDQAFIRDAPRDANIAAI 761 Query: 586 VQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 ++ + +V A GV + + L +R QG F+ P D ++ Sbjct: 762 AEASISLGHKLGLEVVAEGVETAEQLAFLRRRACDLIQGFHFSRPLPADALTPFLAR 818 >UniRef50_C7RVM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RVM5_9PROT Length = 708 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 95/504 (18%), Positives = 189/504 (37%), Gaps = 20/504 (3%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F W G E R + T ++ +I + Sbjct: 209 FYQRMWNSLVEKGYWQGEIWNKRKSGQIYAELLTITAIVASGGITTHYVASFSDITEDK- 267 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + + I A D T L NR ++L L + G +G + I L +F L+D Sbjct: 268 ---QAEAEIHRLAYYDALTRLPNRRLLQDRLGQALAAAARHGLYGALFFIGLDNFKTLND 324 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT--LKEAESIA---- 325 T GH + + L + G +AR +F LL + EA ++A Sbjct: 325 TRGHDVGDLLLVEVAQCLRAQVRE--GDTVARLGGDEFVLLLDGVSGNADEAAAVAKEVG 382 Query: 326 GQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIY 385 +L +A + + + IG+ + + E++ + A+ A A G + + Sbjct: 383 DKLREATSRPFSLDGQEYRCKLSIGVSLFAALDTVEELFKRADLALYQAKNAGRDRLRFF 442 Query: 386 DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSS 444 D ++ + + Q L+ RL+ +P + G+V E + R + VS Sbjct: 443 DPAMQAAMDLRGALESDLHQALALDQLRLHYQPQIDTAGRVIGVEALLRWWHPQRGLVSP 502 Query: 445 AEYMPMVLQFGLSEEYDRLQISRLIPLLRYW------PEENLAIQVTVESLIRPRFQRWL 498 E++P+ GL R + L++ W +A+ V+ + F + Sbjct: 503 NEFVPLAESTGLILPIGRWILETSCVLIKNWESDACTRSLQVAVNVSARQFRQADFVEQV 562 Query: 499 RDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWI 558 + +L + + R+ +EL E+ + +++ + + LGV +++ G S S++ Sbjct: 563 KRSL-KASGANPARLKLELTESVLLKNVEDTIAKMLAIKRLGVAFSLDDFGTGYSSLSYL 621 Query: 559 KELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRG 618 +L ++ LK+ VR + + + + ++++ V A GV S ++ Q L G Sbjct: 622 AQLPLDQLKIDQSFVRKLPGARKEETIARTIITMGRELDMNVIAEGVESEAQRQFLEAHG 681 Query: 619 VTGGQGDFFASSQPLDTNVKKYSQ 642 QG F+ P++ + Sbjct: 682 CHAFQGYLFSRPLPVEHLTVFLQE 705 >UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLV2_DESVM Length = 896 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 80/503 (15%), Positives = 178/503 (35%), Gaps = 16/503 (3%) Query: 149 VMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQN 208 F W G+ E R + + P + + +I Sbjct: 387 DSAFYEDMWRALVEEGRWEDEIWNRRRNGEVYPEWLSISAIPGPTGRTEYYVAVFHDITE 446 Query: 209 AREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNM 268 + + ++ I+ A D TGL NR ++L + + V+ + L +F Sbjct: 447 LKAK----ESQIQHQAHHDALTGLPNRALLRDRLGMAINGARREDRKVAVLSVDLDNFKQ 502 Query: 269 LSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQ 327 ++D+ GH + + + P LAR +F +L ++A +A + Sbjct: 503 VNDSLGHMVGDIYLQQAAEQMRQMVR--PQDTLARVGGDEFVVVLQDVEGERDAAQVAER 560 Query: 328 LIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYD 386 L+ + + +GI + G D + ++ +A+ A A QG + ++ Sbjct: 561 LLARFTDPVRVQEHELFVGASVGIALFPDDGDDPDTLVRNADIAMSRAKEQGKRRYHLFT 620 Query: 387 DSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGNE-EVSS 444 ++ ++ + + + L+ G + +P V G + E + R + + Sbjct: 621 PAMNDRAVRRLSLEGDLHRALAAGDITAHYQPRVDLNTGLITGMEALARWIRADGSQEHP 680 Query: 445 AEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLR 499 AE++P+ GL + R + +A+ ++V + Sbjct: 681 AEFIPLAESTGLIVPLGEHMLRLACAKTRALCDAGHADLHVAVNLSVHQFRHRNLVGMVA 740 Query: 500 DTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIK 559 D L + + +E+ E+ + + + + +G+ ++V+ G S +K Sbjct: 741 DVLAET-GLPPHLLELEITESTIVTDVDHTIRKLNQLAEMGIALSVDDFGTGYSSLYQLK 799 Query: 560 ELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGV 619 L + LK+ +R+I + + +++ +V A GV + + L+ G Sbjct: 800 NLPLTSLKIDRSFIRDIPDDPNDAAIAATIITMADRLGLRVVAEGVETPEQLNFLLLEGC 859 Query: 620 TGGQGDFFASSQPLDTNVKKYSQ 642 QG F+ P D ++ Sbjct: 860 HEVQGFLFSRPLPPDEFTALLAR 882 >UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=uncultured bacterium 9F08 RepID=D2XIQ4_9BACT Length = 965 Score = 679 bits (1752), Expect = 0.0, Method: Composition-based stats. Identities = 92/612 (15%), Positives = 208/612 (33%), Gaps = 45/612 (7%) Query: 38 FSHRVQAVATAIDTHLVSNDFSVLRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRP 97 ++ +A+ L + L + ++ +A + L + + ++ + Sbjct: 250 RERQLHQMASETQQAL--HQARQLGQEQQMILDAAADAIIGLDNRGRVTFSNPAATALFG 307 Query: 98 VGSSDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRW 157 + +L E LI ++ G ++ F Sbjct: 308 YSAEELQGEDLHALIHLCKEGEAHPREEC------------------GLWRLLRFGGQY- 348 Query: 158 LQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLD 217 + G+ + R+I + Sbjct: 349 --------HSGHETLRHKDGTPLPVEMNGSAIDDEKGVVIGAVLTFRDISERLS----YE 396 Query: 218 TLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQ 277 + A D TGL NR+ +L + G V+ + L F +++D GH Sbjct: 397 QELERRAHYDELTGLANRVLLKARLQQTTAQAHRHGKSVAVLFLDLDHFKIVNDGLGHDC 456 Query: 278 VEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL-KEAESIAGQLIKAVDTLP 336 + + L T + +AR+ +F +L ++A I +L++ + Sbjct: 457 GDRLLVAIAQRLQTVVRE--ADTVARHGGDEFVIVLSEPDNGEDAAEIGRRLLQRIAEPV 514 Query: 337 NNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRG 395 + +G+ + G D + ++ +A++A A G N+ Y + + Sbjct: 515 WIDEHELYTTASVGVSLFPRDGTDVDTLLRNADAAMYRAKHLGRNNLQFYSEEMNLSLSK 574 Query: 396 NVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQ 453 +R + + Q + R L+ +P + G++ E + R VS AE++P+ + Sbjct: 575 RLRMLSQLRQAVERNELCLHYQPQASLPGGRLLGVEALVRWQHPELGMVSPAEFIPLAEE 634 Query: 454 FGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKS 508 GL E + W +++ ++ P+ +RD L Q Sbjct: 635 SGLIEPIGEWVLREACRQGVAWDRAGFMPLRISVNLSARQFDNPKLDDTIRDVLEQT-GL 693 Query: 509 QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKL 568 +R+ +EL E + + + + + LGVR+A++ G S ++++ +L+K+ Sbjct: 694 APERLELELTETALIANPQQSVQRLSAIRDLGVRLALDDFGTGYSSLAYLQRYTFDLIKI 753 Query: 569 HPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFA 628 V + + N +V++++ ++ A G + L + G QG + + Sbjct: 754 DRSFVADAIRNPGNAAIVRTVIAMARLLGSETIAEGAETAETITFLGRNGCDAVQGYYIS 813 Query: 629 SSQPLDTNVKKY 640 P + + Sbjct: 814 RPLPAGEIEQLF 825 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 679 bits (1752), Expect = 0.0, Method: Composition-based stats. Identities = 89/504 (17%), Positives = 204/504 (40%), Gaps = 21/504 (4%) Query: 154 AVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSA----LDTLLREIQNA 209 + Q A E R + G + P S+ ++ +I Sbjct: 583 GHFYQQMLQALDEHGFWRGEMWNRRQNGELLPMMTSINPVCDSNGEILYYISIYTDISQL 642 Query: 210 REQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNML 269 ++ +RL+ A D TGL NR +L + L+ T ++M+ L F + Sbjct: 643 KDSEARLE----HMALHDPLTGLPNRAMLGQKLDSALQHAMLNSTRVALLMLDLDHFKNV 698 Query: 270 SDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL-PHRTLKEAESIAGQL 328 +D++GH +E ++ L + ++ R +F LL + + + +A ++ Sbjct: 699 NDSFGHHFGDELLHQVSARLKQQLRE--SDVVCRLGGDEFTVLLQNNPSPDDVSLLAERI 756 Query: 329 IKAVDTLPNN-KMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYD 386 I A+ + IGI + G E++M+ A++A A G + + + Sbjct: 757 IHALHQPFLLSNAREVMIGTSIGISLYPEHGSTAEELMQQADTAMYRAKHDGRDGYRYFS 816 Query: 387 DSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSS 444 + L K + + + + ++ +++ +P ++ + Q+ E + R D + Sbjct: 817 EELFLKAKARLELEQRLHRAITGQEFKVFYQPQISIKTNQIIGAEALLRWDDPEYGLIPP 876 Query: 445 AEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLR 499 +E++ + + GL + + R W +++ LA+ ++ L R L Sbjct: 877 SEFISVAEETGLIQNIGEWVLYETCRQGRDWLDQHLPPINLAVNLSPLQLHHGD-VRQLI 935 Query: 500 DTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIK 559 T++ + +EL E+ + + +++ + G+R+A++ G S +++K Sbjct: 936 GTILHNSGFPAHHLELELTESALMEQQEETVKILQGLRQQGIRIAIDDFGTGYSSLAYLK 995 Query: 560 ELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGV 619 + +++LK+ V +I ++ + ++V V A GV ++++ + L Q+G Sbjct: 996 QFPLDVLKIDKRFVEDIPHERDDMEIAATIVAMGHSLRLTVLAEGVETKAQLEFLEQQGC 1055 Query: 620 TGGQGDFFASSQPLDTNVKKYSQR 643 QG ++ P + + SQ+ Sbjct: 1056 DYYQGYLYSMPLPAEEFAQLLSQQ 1079 >UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNY7_9PROT Length = 1003 Score = 678 bits (1751), Expect = 0.0, Method: Composition-based stats. Identities = 100/504 (19%), Positives = 191/504 (37%), Gaps = 25/504 (4%) Query: 158 LQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLD 217 Q + ++ + GS P + ++R+I + Sbjct: 466 RQGIERALHQGDLQSVFLDLPVEGSMHHYEARIAPHG-PDKVVVVVRDIT----LQKHSE 520 Query: 218 TLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQ 277 IR A D TGL NR F +L L + ++ + L F ++DT GHS Sbjct: 521 EKIRRLAYFDTLTGLPNRQSFLERLDRELLRARRTNHRMALLFLDLDGFKRINDTLGHSA 580 Query: 278 VEEQFFTLTNLLSTFMM----------RYPGALLARYHRSDFAALLPHRT-LKEAESIAG 326 + T+ + L + AR +F +LP ++ A IA Sbjct: 581 GDCLLQTVADRLQEKLRAGAFIARPALDESSLHFARLGGDEFTVVLPDVDTVETACLIAQ 640 Query: 327 QLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIY 385 ++ + + + IGI + G D +++HA++A A QG N+W +Y Sbjct: 641 RIQELLGRPTLIGEQEIAVTSSIGIALFPDDGADAATLLKHADTAMYYAKEQGRNNWQLY 700 Query: 386 DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFDGN-EEVS 443 D +L + + I + L RG RL+ +P V+ + G + E + R VS Sbjct: 701 DRTLTTRTTARLALEGDIRKGLERGEFRLFYQPQVSADDGTIVGVEALIRWQHPQQGLVS 760 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWL 498 A ++P+ + GL ++ +R W + + A+ V+ L F + Sbjct: 761 PARFIPVAEESGLIVPIGEWVLTAACRQVRQWQQSGVPVPRVAVNVSARQLGAAGFLDTV 820 Query: 499 RDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWI 558 ++ R+ +EL E+ + ++ + + A+GV +++ G S S+I Sbjct: 821 AAIIVAT-GIAADRLELELTESILMDPEAKRIKGLSRLRAMGVHFSIDDFGTGYSSLSYI 879 Query: 559 KELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRG 618 K + LK+ V + + ++ + +++ + +V A GV +R + L + Sbjct: 880 KRFPIGTLKIDQSFVHGLPQDADDAGITTAIISMARSLNLEVVAEGVETREQLAFLQRAL 939 Query: 619 VTGGQGDFFASSQPLDTNVKKYSQ 642 QG F+ P D + Sbjct: 940 CPKLQGYLFSYPLPPDEMEAILRR 963 >UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1G1_PELCD Length = 1061 Score = 678 bits (1751), Expect = 0.0, Method: Composition-based stats. Identities = 79/484 (16%), Positives = 182/484 (37%), Gaps = 13/484 (2%) Query: 169 ETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDV 228 E + GS P R + + I+ R + ++ A D Sbjct: 576 EWHGEFHNKRKDGSLFWEHASISPVRNDAGDISHFLAIKEDITDRKRYEEQLQHLATHDN 635 Query: 229 KTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNL 288 TGL NR ++L + ++ G +++ L F +++D+ GHS + + Sbjct: 636 LTGLANRALLQDRLEQSILFAKRSGRLVAALLLDLDRFKIINDSLGHSFGDRLLQIAADR 695 Query: 289 LSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMI 347 L + +AR +F LL ++ +A +++ + + Sbjct: 696 LRESVR--GADTVARLGGDEFVILLAEVANEEDVGKVAKKILDRITAPFQIADREITVTA 753 Query: 348 HIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQM 406 +GI + G+D E ++ +A+ A A +G N++ +Y + + T + + Sbjct: 754 SLGISIYPQDGEDEETLIRNADIAMYQAKEEG-NAFRLYAPEMNIVVHEAMEMETDLRRA 812 Query: 407 LSRGGPRLYQKPAVTRE-GQVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQ 464 L RG L+ +P + + G++ E + R ++ ++P+ + GL Sbjct: 813 LDRGELLLHYQPKIDLDSGKITGAEALVRWQHPVRGMIAPGMFIPLAEETGLILPIGEWV 872 Query: 465 ISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAE 519 + + ++ W + +A ++ ++ L + +EL E Sbjct: 873 LENICLQIKSWQTQGFPLVPIAANLSARQFRNDELIATIQRILQDT-GLPPHLLELELTE 931 Query: 520 ADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKR 579 + + +++ ++ +NALGV +A++ G S ++++ V+ LK+ + ++ Sbjct: 932 SMIMRNVQTAAETMQELNALGVSLALDDFGTGYSSLNYLRRFPVDCLKIDRSFISDVADD 991 Query: 580 TENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKK 639 + S++ Q A GV + + + L Q QG +++ ++ Sbjct: 992 PSAAAVATSIIAIAHSLGLQAVAEGVETEEQLEFLRQCACDSYQGYLYSAPLAVEEFTAM 1051 Query: 640 YSQR 643 Q Sbjct: 1052 LRQE 1055 >UniRef50_Q3SIU2 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SIU2_THIDA Length = 1012 Score = 678 bits (1751), Expect = 0.0, Method: Composition-based stats. Identities = 97/502 (19%), Positives = 199/502 (39%), Gaps = 26/502 (5%) Query: 156 RWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSR 215 R L Q+ + R V ++ + + +L+R++ +E Sbjct: 519 RALWEQIKVLNSMTIEGHYKTRSGRTFPVEVSVNYFVYGGREYVLSLVRDVTERKE---- 574 Query: 216 LDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGH 275 ++ IRS A D TGL NR ++L E+ +G +M++ L F L+DT GH Sbjct: 575 VEAQIRSLAYFDSLTGLPNRRLLLDRLNQARLSSERTREYGALMILDLDRFKTLNDTQGH 634 Query: 276 SQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLP------HRTLKEAESIAGQLI 329 + + L+ + + + R +F +L + + +AE+IA ++ Sbjct: 635 DVGDRLLIDVARRLTASVRQ--NDTVCRLGGDEFVVVLEGFGSDEDQAVTQAEAIAEKVR 692 Query: 330 KAVDTLPNNKML--DRDDMIHIGICAW-RSGQDTEQVMEHAESATRNAGLQGGNSWAIYD 386 A++ + +G+ + + +++ A+ A A G N ++ Sbjct: 693 AALNQPYSLSGNGSRFHSTTSVGLTLFCGHDATADMLLKQADVALYQAKDAGRNLVRFFN 752 Query: 387 DSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNE--EVSS 444 ++ + + Q L R +Y +P V + +V E + R +S Sbjct: 753 PAMQAAIDTRMAMEAALRQALERDEFHVYYQPQVDQRERVIGAEALLRWR-PQGNEAISP 811 Query: 445 AEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP------EENLAIQVTVESLIRPRFQRWL 498 E++P+ + GL + + L+ W +A+ V+ P F + Sbjct: 812 LEFIPLAEETGLILPIGKWVLDVACAQLKAWESDPRAAHLKIAVNVSARQFHEPDFVATV 871 Query: 499 RDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWI 558 +D+L + R+ +EL E+ V + I + + +NALGV ++ G S S++ Sbjct: 872 QDSLAR-SGVDPTRLQLELTESVVLEKIETVVSRMEELNALGVSFCLDDFGTGYSSLSYL 930 Query: 559 KELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRG 618 K L ++ +K+ VR++ + + +VQ+++ V A GV + ++ L + Sbjct: 931 KRLPLDQVKIDQSFVRDVVDDSNDAAIVQAIMAMSRSLGLNVIAEGVETHAQRDFLAGK- 989 Query: 619 VTGGQGDFFASSQPLDTNVKKY 640 G QG F P++ + Sbjct: 990 CLGYQGFLFCEPIPIEQWERVL 1011 >UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5VXY3_SPIMA Length = 1092 Score = 677 bits (1749), Expect = 0.0, Method: Composition-based stats. Identities = 83/494 (16%), Positives = 191/494 (38%), Gaps = 14/494 (2%) Query: 158 LQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLD 217 L RQ+ + + G P R T ++ Q + Sbjct: 602 LWRQITSGKQWSGEFH--NKKKNGELFWEHASICPMRDEEGYITHFIAVKEDITQQKHNE 659 Query: 218 TLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQ 277 ++ A D T L NR ++L + + + ++ VM I L F ++DT GH Sbjct: 660 EILAHQANYDALTDLPNRTLIFDRLRQAITEAQVHHSNVAVMFIDLDHFKNINDTLGHEL 719 Query: 278 VEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK-EAESIAGQLIKAVDTLP 336 + L + + + R +F ++P +AE IA Q++ + Sbjct: 720 GDFLLKEAGMRLRGCIRKT--DTVGRLGGDEFLLIIPKLDDLVQAEYIANQVLDVLGEPF 777 Query: 337 NNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRG 395 N + IGI ++ G++ ++ +A++A A +G N +A + ++ ++ + Sbjct: 778 NLCGEEAFISASIGIASYPQDGKNVSTLVRNADTAMYAAKQEGRNVFAFFTQNMNDEAQS 837 Query: 396 NVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQ 453 + + +SR + +P + Q+ E + R ++ + +++ + + Sbjct: 838 RIIIENQLRHAISRNELSVVYQPFIHLNTSQIVGAEALMRWYNPELGNIRPDQFIAIAEE 897 Query: 454 FGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKS 508 L + +S+ + W ++ +A+ ++ L P + + + Sbjct: 898 SRLIVDLGEWILSQACQEVANWHQQGNNGLWVAVNMSPRQLRTPNLVNVIIEAIAN-NGL 956 Query: 509 QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKL 568 + +E+ E + + + +Q +I+ +N L +R+A++ G S S++K +LK+ Sbjct: 957 SSDCLELEITERSLVEEVPGVQSLIKQLNHLKIRLAIDDFGTGYSSLSYLKRFPFSVLKI 1016 Query: 569 HPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFA 628 + ++ + LV++++ G V A G+ + ++ L +G GQG F+ Sbjct: 1017 DKSFISDLPDDQDAIALVKTMITMAHGLGLVVVAEGIETTAQLDFLCNQGCDYGQGYLFS 1076 Query: 629 SSQPLDTNVKKYSQ 642 P + Sbjct: 1077 KPLPPAQFRAYLQR 1090 >UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=4 Tax=Comamonadaceae RepID=A1W7N9_ACISJ Length = 1047 Score = 677 bits (1748), Expect = 0.0, Method: Composition-based stats. Identities = 84/466 (18%), Positives = 174/466 (37%), Gaps = 23/466 (4%) Query: 195 TSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGT 254 S + T++ + Q + +R A D TGL NR ++L L + Sbjct: 591 GDSHIVTMV-----DQSQRKAAEEEVRYLAYNDPLTGLPNRRLLLDRLEQALAMSARHQL 645 Query: 255 HGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLP 314 G VMM+ L +F +++T G + + L + LAR+ +F +L Sbjct: 646 CGAVMMLDLDNFKTINETQGPDMGDRLLREVARRLRDCVPE--DETLARHGGDEFVVVLK 703 Query: 315 HRTLK------EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHA 367 AE + ++ A+ + + +GI +R + +++++ + Sbjct: 704 DLGADPQEAANRAEEMGQTILAAIRAPFDIDGQQHHTALSVGIAIFRGVRESADELLKRS 763 Query: 368 ESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVH 427 + A A G ++ +D + + L G L+ +P V + G++ Sbjct: 764 DLAMYEAKAAGRDTLRFFDPQMQAAVSERAALEADLRAGLDAGQLELFYQPKVDQ-GRIT 822 Query: 428 HRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP------EENL 480 E + R +S AE++P+ + GL + L W E + Sbjct: 823 GAEALVRWRHPDRGFISPAEFIPLAEESGLILRVGEWVMRSACAQLAQWSAHPVLGELTV 882 Query: 481 AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALG 540 A+ V+ F + + L + +R+ +EL E + Q + + + G Sbjct: 883 AVNVSPRQFHEGSFVPQVLEALA-ASGADARRLRLELTEGMLLQDVEDTIAKMVQLRGYG 941 Query: 541 VRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQV 600 V +++ G S +++K L + LK+ VR++ + ++ +++V + +V Sbjct: 942 VGFSLDDFGTGYSSLAYLKRLPLHELKIDKSFVRDVLTDPNDAVIARTIVALGTSLGLRV 1001 Query: 601 YATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV 646 A GV + ++ L + G QG + +R V Sbjct: 1002 VAEGVETEAQRAFLERNGCHAWQGYLLSPPLQAAAFEALVLKRAGV 1047 >UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FU0_DECAR Length = 1006 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 91/496 (18%), Positives = 186/496 (37%), Gaps = 16/496 (3%) Query: 156 RWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSR 215 W G E R G + ++ ++ Sbjct: 515 MWNGIAERGFWQGEIWDRRKDGGIYPKWMSISVIRGEDGMIRYHVAHFTDVS----SERA 570 Query: 216 LDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGH 275 + + A DV TGL NRL +L L + G+ V+ + L F +++DT GH Sbjct: 571 AEERLHHMAHHDVLTGLLNRLSLKGRLDQALAAARRDGSRVAVLFVDLDRFKVINDTLGH 630 Query: 276 SQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA-ESIAGQLIKAVDT 334 +E + N L + ++AR +F +L A +A +L+ +V Sbjct: 631 HVGDELLIEVANRLRDGVR--DSDVVARVGGDEFVIMLSGVEHTSAVAMVAEKLVFSVGQ 688 Query: 335 LPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKG 393 D IGI + G+D + +M++A++A +A + G N++ +D + E Sbjct: 689 SYQIGGYDLYSTPSIGIAIYPTDGEDGDILMKNADAAMYHAKMAGRNNFQFFDAKMNEAA 748 Query: 394 RGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMV 451 + + + L+ LY +P + +V E + R + +++ + Sbjct: 749 LERLNTEHALRRALANQEFCLYYQPVIDLASNRVASLEALIRWNHPEKGLLLPGKFIGIA 808 Query: 452 LQFGLSEEYDRLQISRLIPLLRYWPEENLA-----IQVTVESLIRPRFQRWLRDTLMQCE 506 + GL + + L + ++ + ++ + L +++ Sbjct: 809 EETGLIQPLGEWVLWAACRQLADFAAAGISGIKMGVNISAIQMRNGNLP-LLARGVIEAY 867 Query: 507 KSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELL 566 + +I E+ E+ + + ++ L+NA+GV VA++ G S S+++ + L Sbjct: 868 DIDPRNLIFEITESVAMEQPTETVRILDLLNAMGVSVAIDDFGTGYSSLSYLRMFPINHL 927 Query: 567 KLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDF 626 KL V I + + ++ + + +V A GV ++++ L RG QG Sbjct: 928 KLDRSFVEQIGEEIDGCVICDATIGLAHSLELKVVAEGVETQAQLDYLRSRGCDMVQGFL 987 Query: 627 FASSQPLDTNVKKYSQ 642 F+ P D + Q Sbjct: 988 FSRPVPADEVLAFIRQ 1003 >UniRef50_A1T0Y1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T0Y1_PSYIN Length = 727 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 84/481 (17%), Positives = 184/481 (38%), Gaps = 23/481 (4%) Query: 176 LNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNR 235 + SS + + ++I + + + A D TGL NR Sbjct: 231 DGSSFPVEFTASPICKTNSESSGIVLVFQDISE----RKKTEQQLTRLAQYDCLTGLPNR 286 Query: 236 LFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMR 295 F + L+ + ++ ++ + L F ++D+ GH + + L + Sbjct: 287 ALFTSLLSQAISRSDRRKNKLALLFLDLDRFKQVNDSLGHDVGDLLLQQVAQRLQ--LAT 344 Query: 296 YPGALLARYHRSDFAALLPHRTLKE--AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICA 353 G ++R +F +L + A +A ++I ++D N + IGI Sbjct: 345 LEGGTVSRLGGDEFMVILEEVNSESHKAAKLAQKMITSLDAPFNILGREVLISTSIGIAL 404 Query: 354 WRSGQD--TEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGG 411 SG + +++ A+ A A QG N++ Y L ++ ++ + L R Sbjct: 405 C-SGSTQCIDSLLKRADMAMYRAKEQGRNNFQFYTAELQQQASKSIELENRLRHALQRKE 463 Query: 412 PRLYQKPAVTR-EGQVHHRELMCRIFDGNE--EVSSAEYMPMVLQFGLSEEYDRLQISRL 468 L+ +P V GQ+ E + R + +S E++P+ + GL + Sbjct: 464 FFLHYQPQVDTNSGQIIGLEALLRWQ-PDGQALISPEEFIPVAEEAGLIVPIGEWVLREA 522 Query: 469 IPLLRYWPEENL-------AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEAD 521 L W L A+ ++V L L L + + ++ +E+ E Sbjct: 523 CSQLHRWHRSGLLSPTVKMAVNLSVRQLEHTSLLSTLTQILQET-GLKPSQLELEITETA 581 Query: 522 VGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTE 581 V + + ++ ++A+G++++++ G S ++K L + +LK+ + +I + Sbjct: 582 VMKDPDLVVNILHSIHAMGIQLSLDDFGTGYSSLRYLKLLPLHVLKIDRSFINDIGGKQR 641 Query: 582 NQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 +Q +++S++ V A GV ++ + L + QG + + + K Sbjct: 642 DQAILESIIYLSRNLDLTVVAEGVETQEQLDFLSRFNCHSIQGYYISKPKSAANIEKLLH 701 Query: 642 Q 642 + Sbjct: 702 K 702 >UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC Length = 1499 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 80/434 (18%), Positives = 173/434 (39%), Gaps = 13/434 (2%) Query: 214 SRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTW 273 SR + I A DV T L NR F QL L+ G V+ + L F +++DT Sbjct: 1044 SRAEKDIHQLAYHDVLTSLPNRTLFHKQLGELMNRSHLRGEQFAVLFLDLDRFKLVNDTL 1103 Query: 274 GHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAV 332 GH + + + + ++AR +F +L + + A +A ++ + Sbjct: 1104 GHEVGDLLLKAAADRIVGCLR--SNDMVARLGGDEFTVILEKIESPRVAAEVAAKICSVL 1161 Query: 333 DTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPE 391 + + IGI + G+D +++HA++A A QG NS+ Y+ + Sbjct: 1162 SKVFAFSGQEMYISTSIGISLYPGDGEDVSTLVKHADTAMFRAKEQG-NSYQFYEKGMET 1220 Query: 392 KGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMP 449 + + + L + LY +P + G++ E + R + +E++P Sbjct: 1221 AAVKRLGLEAELRRALEQNELALYYQPQINLGTGEIATLETLIRWHHPEHGLIPPSEFIP 1280 Query: 450 MVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQ 504 + + GL + ++ W + +A+ V+ L R + L + Sbjct: 1281 LAEETGLIASIGAWILREACTQMQSWLQRGFGPFHIAVNVSGRELEREDLVDKIVTILKE 1340 Query: 505 CEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVE 564 K + +E+ E+ V + P R + +G++ A++ G S +++K V+ Sbjct: 1341 T-GLPPKWLELEITESVVMKGAGAAIPKFRRLREMGIKFAIDDFGTGYSSLNYLKSFPVD 1399 Query: 565 LLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 +LK+ + ++ ++ +++ ++ +V A GV ++++ + L QG Sbjct: 1400 ILKIDRCFIHDVVSNPDDAAIIKGIIALAHSLRLKVVAEGVETQAQEEFLKAHQCDRFQG 1459 Query: 625 DFFASSQPLDTNVK 638 + + + Sbjct: 1460 FYLSEPLSAAEIEQ 1473 >UniRef50_Q1K210 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K210_DESAC Length = 920 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 83/494 (16%), Positives = 186/494 (37%), Gaps = 19/494 (3%) Query: 157 WLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRL 216 W Q ++ ET R + + + ++R+I + Sbjct: 431 WEQLKVEQGVRFETMQFRQDGSTFPVEINARWIDLDRGH--LVQAIIRDISERKA----A 484 Query: 217 DTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHS 276 + + A D TGL NRL ++L + + T +++++ L F ++DT GH+ Sbjct: 485 EDQLVHQAYHDPLTGLPNRLLISDRLKLAIAKARRHKTQAVLLLLDLDRFKNINDTLGHA 544 Query: 277 QVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTL 335 + TL + + +AR+ +F LL L + S+A +L V Sbjct: 545 VGDRILTTLAQRMQETLR--DTDTVARFGGDEFLVLLEDIRELSDVVSLAQKLSDLVSQP 602 Query: 336 PNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGR 394 + +GI + +Q++ A++A A +G N++ Y + Sbjct: 603 VLIDGEEMCLTTSVGISVAPEDSIEVDQLIRFADTAMYRAKEKGRNNFQFYTPDMNAHAG 662 Query: 395 GNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFDGN-EEVSSAEYMPMVL 452 ++ + + L R +Y +P V + G++ E + R +S +++P+ Sbjct: 663 RRLQLENNLRKALQRQEMVVYYQPQVEMDSGRIIGSEALLRWMHPEHGLISPNDFIPLAE 722 Query: 453 QFGLSEEYDRLQISRLIPLLRYWP----EENLAIQVTVESLIRPRFQRWLRDTLMQCEKS 508 + G+ EE + + W E +A+ ++ + L + Sbjct: 723 ETGVIEEIGAWALEQACQQTVAWQKNHPELKIAVNLSARQFRNENLVDDIEQILNKT-GL 781 Query: 509 QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKL 568 + + +EL E+ + + + ++ + LG+ +A++ G S S + ++ LK+ Sbjct: 782 AARHLEMELTESLLMEDVDVAIDLMNRLTKLGITLAIDDFGTGYSSLSHLNRFPIDKLKI 841 Query: 569 HPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFA 628 V ++ + ++++ + A GV + + Q L+Q G QG +F+ Sbjct: 842 DRSFVNSMSLDNNG--IARTIITLGRTLGLSIIAEGVENNEQRQLLLQLGCPQAQGYYFS 899 Query: 629 SSQPLDTNVKKYSQ 642 + + + Sbjct: 900 RPVHDNAFSEMLEK 913 >UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V280_9PROT Length = 725 Score = 676 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 94/508 (18%), Positives = 181/508 (35%), Gaps = 22/508 (4%) Query: 149 VMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQN 208 F A W + GQ E R + T + + + +I Sbjct: 211 DADFYAAMWQCIKNTGQWSGEIWDRRKNGEIYPKWLTITEVKSFDGSVVHYVSSQVDITA 270 Query: 209 AREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNM 268 + + I + A D T L NR ++L + + G H +M I L F Sbjct: 271 RKAS----EDRIHNLAFYDPLTQLPNRRLLLDRLRHSVSFSLRDGRHVALMFIDLDKFKK 326 Query: 269 LSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT------LKEAE 322 ++DT GH + + T + +AR +F LL +A+ Sbjct: 327 INDTLGHDIGDLLLKQVAERTLTCVR--TCDTVARLGGDEFVVLLDGLAGNLHEAAAQAK 384 Query: 323 SIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSG-QDTEQVMEHAESATRNAGLQGGNS 381 I ++I ++ + + IGI + Q E +++ A+ A A G N+ Sbjct: 385 QIGRKIIDTLNQSYDLAGHEYQSGASIGIALFDEHCQTAEDLLKQADIAMYQAKKAGRNT 444 Query: 382 WAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NE 440 +D + V + L + + +P ++REG+V E + R Sbjct: 445 LRFFDPEMQASILARVALEKDFKDALLQEQFYICYQPVISREGRVAGAEALVRWRHSIRG 504 Query: 441 EVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYW------PEENLAIQVTVESLIRPRF 494 VS A+++P+ + GL + L W + +A+ V+ L + F Sbjct: 505 IVSPADFIPLAEETGLIVPLGNWVLKTACRQLSDWSSRDDTRDLTIAVNVSARQLKQEDF 564 Query: 495 QRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVS 554 + + + + +R+ +EL E+ + + + L+ G+ A++ G S Sbjct: 565 VTTVMGLIEET-GANPRRLKLELTESMLVSDAESIIVKMNLLKEAGITFALDDFGTGYSS 623 Query: 555 TSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTL 614 +++ L ++ LK+ VRNIE ++ + + +V A GV + ++ L Sbjct: 624 LAYLSRLPLDQLKVDQSFVRNIETEDSAVVICAATINLAHNLKLKVVAEGVENEAQRYFL 683 Query: 615 IQ-RGVTGGQGDFFASSQPLDTNVKKYS 641 QG F+ +D Sbjct: 684 SSVHQCDFLQGYLFSKPVAIDEFECFIR 711 >UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=A1TZQ7_MARAV Length = 819 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 103/663 (15%), Positives = 229/663 (34%), Gaps = 23/663 (3%) Query: 2 RLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFSVL 61 L + L T I + L + + + + + +S + Sbjct: 161 ELRRRVGFI--LATQFLIIFVVSILILWIFRHLVTRHLADMADYTRDLSLRNLSRPLELD 218 Query: 62 RPQITELM-MSADIVRVDLLHGDKQV--YTLARNGSYRPVGSSDLFRELSVPLIKHPGMS 118 RP +V + +++ R + + S + Sbjct: 219 RPDTPAYQRDELGMVTEAINQMRERLIDDVTRRERDEAEIRKFSKAIDQSPSSVLICDRQ 278 Query: 119 LRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVR----WLQRQLAGQELLETRATR 174 R+ Y + + + + +I + W +L Q + + Sbjct: 279 WRIEYANRKFSQLTGNSPSEIIGKHPSSLIDPGVDSHEARQLWKSIRLQVQRVGVWQGEV 338 Query: 175 ILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNN 234 + G + P + ++ T + R + + A D+ TGL N Sbjct: 339 NSTRKNGERYWEQLVVTPIKDNNGESTGYLILGEDISIRKRYEQQLLRQANYDILTGLPN 398 Query: 235 RLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMM 294 R+ ++L L + + VM + L +F ++DT GH + +S+ + Sbjct: 399 RMLALDRLKLALAQARRDESKVGVMFLDLDNFKHINDTLGHDAGDTLLIEAARRISSCLR 458 Query: 295 RYPGALLARYHRSDFAALLPHRTLKEAES-IAGQLIKAVDTLPNNKMLDRDDMIHIGICA 353 +AR +F +LP +A S +A +++K + IGI Sbjct: 459 GTS--TVARLGGDEFLVVLPGLNGPDASSQVAERILKTFAPPFMLSGQEVFVTTSIGIAT 516 Query: 354 WRSGQD-TEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGP 412 + D + +++HA++A A +G +++A + + E ++ + + + L G Sbjct: 517 FPDDSDNSGTLLQHADAAMYEAKHKGKSAYARFTPEMSEVSHERLQMESHMRKALELGEF 576 Query: 413 RLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIP 470 LY +P V G + E + R + V ++P+ + GL + Sbjct: 577 ELYFQPIVDTASGGLVAAEALLRWNNPAMGMVMPDRFIPLAEETGLIIPIGEWVVKEACQ 636 Query: 471 LLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQH 525 W +A+ V+ P F + L + + + +E+ E + + Sbjct: 637 AAYCWQAMTGREISIAVNVSPRQFRDPGFTDAIMRALNDSN-LRPELLELEITERLILDN 695 Query: 526 ISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLL 585 +++ ++ +G+R++V+ G + S++K + LK+ V+++ K E+ L Sbjct: 696 SIETADILKQLDKVGIRLSVDDFGTGYSALSYLKSYPFDTLKIDKSFVQDVLKENEDASL 755 Query: 586 VQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS--QR 643 V++++ +V A GV L QG F++ P + +R Sbjct: 756 VRAIINMAHSLGLKVVAEGVEEEDLTHFLKAEHCDYSQGYFYSRPLPEQDFIHWLETNER 815 Query: 644 YSV 646 ++ Sbjct: 816 ANL 818 >UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFK1_HAHCH Length = 1092 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 84/484 (17%), Positives = 188/484 (38%), Gaps = 11/484 (2%) Query: 169 ETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDV 228 E A + G+ + P + T I N + + + D Sbjct: 457 EGYALLKNYRKDGTLFWSELKVAPVTDAKGDVTHFVAILNDVTESIQYQAQLEYKTKYDN 516 Query: 229 KTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNL 288 TGL NR ++++ + + + + L +F ++D+ GH ++ + Sbjct: 517 LTGLPNRNLLNDRIQQAIAYAARRNKGFALAVFDLDNFKYINDSMGHETGDQLLTEVAES 576 Query: 289 LSTFMMRYPGALLARYHRSDFAALLPHRTLKE-AESIAGQLIKAVDTLPNNKMLDRDDMI 347 L + + G LAR +F L+ + ++ + V K + Sbjct: 577 LRSCLRE--GDTLARLGGDEFVILMHKEECDRPLGLMLNRIQQLVSQPRRLKDKEILVTP 634 Query: 348 HIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQM 406 IG+C + G+D ++++A++A A +G N Y + E + V+ + + Sbjct: 635 SIGVCQFPEDGEDASTLLKNADTAMYKAKERGRNRICSYTQEMNESIQKRVQMEQDLRRG 694 Query: 407 LSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQI 465 + G LY +P + G E + R G+ V E++P+ + GL E D + Sbjct: 695 IENGELELYYQPQLDPHGGGAVGLEALVRWRKGDRMVPPLEFIPIAEETGLITEVDAWVL 754 Query: 466 SRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEA 520 L+ W ++ +++ ++ +R L + + + IE+ E+ Sbjct: 755 RAACLQLKMWRDQKQQMVPVSVNLSPRQFQDAYCVELVRKVLQESN-IEPGCLKIEVTES 813 Query: 521 DVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRT 580 V + + + A+GV+++++ G S S++K + LK+ VRN+ Sbjct: 814 MVMHNAEEALRTMTQLKAMGVQLSMDDFGTGYSSLSYLKMFPFDQLKIDKSFVRNVTNDP 873 Query: 581 ENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 + ++++++ ++ A GV + ++ L++ G QG F++ P+ + Sbjct: 874 QEAAIIRAIIGLGKTLGIKIVAEGVETVEQYSFLVRAGCDLIQGYFYSPPLPVAACMHFL 933 Query: 641 SQRY 644 + + Sbjct: 934 QEDH 937 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 98/500 (19%), Positives = 194/500 (38%), Gaps = 20/500 (4%) Query: 153 LAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQ 212 ++ RW + G+ E R ++ + +I + Sbjct: 595 ISQRWELAEQTGRWQGEIVCRRRSGEHYYEWSALSVVRHANGSVLYFIGQFSDISAVKAA 654 Query: 213 HSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDT 272 +R L D TGL NR ++L +L + +G V+ L F ++D+ Sbjct: 655 EARALRLA----CFDPLTGLPNRSLLFDRLQEVLN---REPHNGAVLFCDLDRFKNINDS 707 Query: 273 WGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA-ESIAGQLIKA 331 GH+ + + L + PG + RY +F +LP + E +A QL+ Sbjct: 708 LGHTLGDAVLKEVARRLVARVR--PGDTVCRYGGDEFVLVLPGLSDCVVLEQLAEQLLAD 765 Query: 332 VDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLP 390 V + LD +G+ + G D + ++ HA++A +A +G N++ + + Sbjct: 766 VSSPILLDGLDLRVTPSLGVAVFPRDGNDCDALLRHADAALYHAKSRGRNTYRFFTREID 825 Query: 391 EKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFDGN-EEVSSAEYM 448 ++ + + L RG L+ +P V G+V E + R +S ++ Sbjct: 826 DRVSEYLHIEHGLRSALERGEFELHYQPQVDMAFGRVVGVEALLRWKHPEQGMISPVRFV 885 Query: 449 PMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLM 503 P+ + GL I W L A+ ++ R + + L Sbjct: 886 PIAEETGLIVPIGMWVIREACRQAMLWRRAGLRPMTMAVNLSGRQFSRS-VIEAIDEALA 944 Query: 504 QCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNV 563 + + +E+ E+ + + V+ + A G+ VAV+ G S +++K + Sbjct: 945 D-SGLDPRWLQVEVTESVIMEDTQEAYTVLEALRARGLTVAVDDFGTGYSSLAYLKRFPI 1003 Query: 564 ELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQ 623 + LK+ +R+I+ +N ++V +++ +V A GV +R++W L Q+G Q Sbjct: 1004 DKLKIDRSFIRDIDLDEDNPVIVDAIIGMAHNLRIKVLAEGVETRAQWDYLRQQGCDEVQ 1063 Query: 624 GDFFASSQPLDTNVKKYSQR 643 G + QP + +R Sbjct: 1064 GYLVSRPQPAAALGQWMLER 1083 >UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U882_9DELT Length = 958 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 83/505 (16%), Positives = 189/505 (37%), Gaps = 16/505 (3%) Query: 151 LFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAR 210 F W + G E R + + + + +I + + Sbjct: 456 EFYGEMWTTLKARGSWHGEIWNRRKNGESYPEILSISSIRDDDGEIANYVAVFHDISDMK 515 Query: 211 EQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLS 270 + + + D TGL NR+ ++L+ L + GT V+ + L +F ++ Sbjct: 516 ----HKEEQLAHHLYHDGLTGLPNRVLVLDRLSMALSHANRTGTKVAVLFLDLDNFKKIN 571 Query: 271 DTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK-EAESIAGQLI 329 D++GH+Q + + L +AR +F ++ + E +A L Sbjct: 572 DSFGHAQGDTLLKAVAERLVALYR--DEDTVARQGGDEFLVVVVDVHEEREVVDLAEGLQ 629 Query: 330 KAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDS 388 + + K + IG+ + GQD ++++A+ A + +G NS+ ++ Sbjct: 630 RVFEEPFVIKGQEVFITPSIGVTLYPDDGQDPASLVKNADMAMYQSKAKGRNSYFLFTQQ 689 Query: 389 LPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGNEE-VSSAE 446 + E+ + + + + L +Y +P V G+V E + R + VS + Sbjct: 690 MSERIAQRLTLESDMRRALKEREFTVYFQPKVDLASGEVSGLEALVRWVKPDGIIVSPED 749 Query: 447 YMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDT 501 ++PM + GL + ++ +A+ ++ + + Sbjct: 750 FIPMAEETGLIVPLGEFVLDASCKAMQVLQGVGCSALTVAVNLSPIQFGQEDLVEMVVAN 809 Query: 502 LMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKEL 561 L + R+ +E+ E+ + + + + LG+ ++++ G S ++K Sbjct: 810 L-ERNGLPASRLELEITESTLMTDVQSSVAQLNRLVELGITISIDDFGTGYSSLYYLKNF 868 Query: 562 NVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTG 621 + LK+ +R+I + +V+++V V A GV ++ + L G Sbjct: 869 PISTLKIDRSFIRDITIDDSDAKIVETVVLMARTMGIGVVAEGVETKEQLDLLATFGCAT 928 Query: 622 GQGDFFASSQPLDTNVKKYSQRYSV 646 QG +++ PL+ ++ + V Sbjct: 929 VQGYYYSRPLPLEKIIEFLLGKNGV 953 >UniRef50_Q488U0 Sensory box/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q488U0_COLP3 Length = 788 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 89/490 (18%), Positives = 190/490 (38%), Gaps = 30/490 (6%) Query: 175 ILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNN 234 + + ++ T L ++ R+I + + I+ A D T L N Sbjct: 295 PDGSKVLHETIKKTFDGFDGTRYGLMSVSRDITERKNH----EDQIQRLAFYDSLTQLPN 350 Query: 235 RLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMM 294 R ++L L+ + + I L F L+DT GH+ ++ + + + Sbjct: 351 RRMLQDRLQLLVTTSARDERFNALFFIDLDHFKTLNDTQGHNMGDQLLIAVAARIQDSVR 410 Query: 295 RYPGALLARYHRSDFAALLPHRTLKEA------ESIAGQLIKAVDTLPNNKMLD------ 342 ++AR +F AL+ + EA E +A ++ ++ + + Sbjct: 411 --DEDIVARLGGDEFVALISNLGEDEATAGHVAEKVAEKIRLSICQPYKLSIKENVDANN 468 Query: 343 ---RDDMIHIGICAWRSG-QDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVR 398 IGI ++S +++++ A+ A A G N+ +D ++ N Sbjct: 469 EMIFHCTPSIGISLFKSNLTSPDEILKQADVAMYQAKAAGRNAIRFFDPAMQIALEENAA 528 Query: 399 WRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLS 457 + Q + G L+ + + + E++ R F VS +++PM + GL Sbjct: 529 MLAELHQAIDNGELELFYQIQIDETKGIQGAEVLLRWFHPIRGMVSPLDFIPMAEESGLI 588 Query: 458 EEYDRLQISRLIPLLRYWPEEN------LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRK 511 R + L+ W +++ V+ + F +++ ++ Sbjct: 589 IPIGRWVLESACHQLKVWENIPNRENWQISVNVSALQFQQENFVEIVQEIIL-SNNINPH 647 Query: 512 RIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPG 571 + +EL E+ V ++ + + +N LG+ +++ G S S +K L ++ LK+ Sbjct: 648 GLKLELTESMVLDNVDIIIEKMHQLNQLGIDFSMDDFGTGYSSLSCLKRLPLKQLKIDQS 707 Query: 572 LVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQ 631 VR+I ++ +VQ+++ + V A GV ++ + Q L G + QG F+ Sbjct: 708 FVRDITTDPDDAAIVQTIINLSNSLKYDVIAEGVETQEQRQFLFNNGCSQYQGYLFSRPV 767 Query: 632 PLDTNVKKYS 641 P+ + S Sbjct: 768 PIAEFEELVS 777 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 675 bits (1744), Expect = 0.0, Method: Composition-based stats. Identities = 99/504 (19%), Positives = 198/504 (39%), Gaps = 19/504 (3%) Query: 153 LAVRWLQRQLAGQ---ELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNA 209 L R + GQ E R R ++V + + T S L+ I Sbjct: 198 LTERLFAEAMGGQTRSHDYEKRYIRRDGETLWAHVSTSWHYNEDGTPSYSVALISNITP- 256 Query: 210 REQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNML 269 H + IR A D TGL NR F + L + + V +I + F + Sbjct: 257 ---HHQAKQKIRQLAYFDGLTGLPNRQLFLEHCNSSLTQARRNRSPLGVCIIDIDRFKGV 313 Query: 270 SDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQL 328 +DT+G+ + T++ LS M R +LAR +FAA++ + E +A ++ Sbjct: 314 NDTYGYESGDALLKTVSQRLSDCMSRE--DVLARLGSDEFAAVIASVGSQDEFSVLAQKM 371 Query: 329 IKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDD 387 + + +GI + G D E ++++A +A A G N++ + Sbjct: 372 LHCLTEPIQIGEQKLYCSGGMGIALFPVDGVDAEALLKNAATAMHQAKQHGSNNFRFFSK 431 Query: 388 SLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSA 445 + + T + + L L+ +P V G + E + R VS Sbjct: 432 GMNRMAWERIEIETGLRRALDLQQLALHYQPQVDLKTGHIIGMEALLRWESPELGRVSPM 491 Query: 446 EYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRD 500 ++P+ + GL + + W +A+ ++ + F L D Sbjct: 492 RFIPLAEETGLILPIGNWVLESACRQAKAWHRAGFPSLRMAVNISARQFKQAGFIDRL-D 550 Query: 501 TLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKE 560 ++Q + + +EL E+ + + + + + G+++A++ G S++K Sbjct: 551 AIIQRSGINPELLEMELTESLIMEKSDETLMTLVDIKSRGIKLAIDDFGTGYSMLSYLKH 610 Query: 561 LNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVT 620 ++ +K+ VR+I + T++ + ++++ +V A G+ +R + L R Sbjct: 611 FPIDRIKVDRSFVRDIPENTDDAAITEAIIAMAHSLKIEVIAEGIETREQLAFLKDRACE 670 Query: 621 GGQGDFFASSQPLDTNVKKYSQRY 644 GQG +F P++T + +Q+Y Sbjct: 671 EGQGYYFGRPVPVETAAEILAQQY 694 >UniRef50_C6HTT7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HTT7_9BACT Length = 860 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 96/488 (19%), Positives = 202/488 (41%), Gaps = 20/488 (4%) Query: 165 QELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYA 224 + ++ R + + + +++ P S + +LR++ + + + A Sbjct: 378 SRIWDSVGQRFDHTQFPMEISSSVFSEPSG--SFVTLVLRDLTERKT----FENQLLYLA 431 Query: 225 AQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFT 284 D TGL NR+ +L + E+ G H ++ + L F ++D+ GH+ + Sbjct: 432 NYDALTGLPNRIHLIERLKQAIPLAERNGQHLALLFLDLDRFKGVNDSLGHASGDLLLVE 491 Query: 285 LTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL-KEAESIAGQLIKAVDTLPNNKMLDR 343 ++ LS + + G +AR+ +F LL ++A+ IA +++ A++ + Sbjct: 492 VSKRLSNCVRK--GDTVARFGGDEFVFLLEGLEEREDAKPIAEKILGALNAPFEIDNVQV 549 Query: 344 DDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTL 402 IGI W G+ ++ ++ A++A A G NS+A Y+ + Sbjct: 550 FMNGSIGISTWPHDGESSDLLLRRADAAMYRAKELG-NSYAFYNPEIGALPERRFSMERE 608 Query: 403 IEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEY 460 + + L R L+ +P + G E + R + +++P+ GL Sbjct: 609 LRRALERNEFELFFQPQIDLATGNCVGAEALIRWRHPEKGLILPDQFIPVAESTGLIVPM 668 Query: 461 DRLQISRLIPLLRYWPEENLA-----IQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIII 515 I P L+ W E +A + V+V+ R + L ++ + + + I Sbjct: 669 GAWVIRSACPHLKSWREAGMAPLRLTVNVSVKQFERGGLIQTLESSMRE-SGVDSRLLEI 727 Query: 516 ELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRN 575 E+ E+ + QH +R ++ +G+ ++++ G S S++K+L V LK+ V Sbjct: 728 EVTESVLMQHP-MASDTLRELSRMGILISIDDFGTGYSSLSYLKKLPVYKLKIDRSFVTT 786 Query: 576 IEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDT 635 + + + ++V S + A GV SR + L + G QG +++ P DT Sbjct: 787 LPVDPDMLAITTAIVTMGSALRLKTIAEGVESREQLDILRRLGCDEIQGYYYSRPLPNDT 846 Query: 636 NVKKYSQR 643 + ++ Sbjct: 847 FMTWVREK 854 >UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SCB7_CHRVI Length = 811 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 111/622 (17%), Positives = 223/622 (35%), Gaps = 40/622 (6%) Query: 53 LVSNDFSVLRPQITE--LMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVP 110 L + ++ I + L+ ++D++ + + TL + RP+G FR+++ Sbjct: 187 LDAEGYAARLQAIAQNPLLEASDLLTLR-QGRVLERVTLPQYARGRPIGRVYAFRDITQR 245 Query: 111 LIKHPGMSLR-LVYQDPMGNYF-----HSLMTTAPLTGAIGFIIVMLFLAVRWLQRQL-- 162 L G+ L V++ + F ++ P + + + R + Sbjct: 246 LHDEQGLKLAARVFEASLDAIFVTDPEFRIVAVNPAGERMTGLAGAELVGQRLDRSLRLW 305 Query: 163 ---------------AGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQ 207 +G E V ++++ Sbjct: 306 ANETLDPDIRAALDRSGHWQGEIEQHHADGSTFPCLVSLMRVLDTEGLPFHYVGFVKDLS 365 Query: 208 NAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFN 267 E R I A D TGL NRL +L +E + T V+ I + F Sbjct: 366 ETVEARQR----IEQLAFNDALTGLPNRLRLTERLEFSIELARRENTRFAVLFIDIDRFK 421 Query: 268 MLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQ 327 ++D+ GH + + + + +AR +F LL AE +A + Sbjct: 422 HINDSLGHVFGDRVLIEVAQRIRQCLRHV--DTIARLGGDEFVLLLHRVESHGAELVARR 479 Query: 328 LIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYD 386 L++++ L IGI + G+ + ++++A+SA + G Y Sbjct: 480 LLESMAQPFELDGLKFSLSCSIGIALYPEDGETLDDLIKNADSAMYHVKEHGRGDCCFYQ 539 Query: 387 DSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSS 444 + VR + + L +G L +P + G V E + R D + E++ Sbjct: 540 RQMNVGLLERVRIDHAMREALQQGHFWLAYQPQIDLVSGLVIGAEALVRWNDPDLGELAP 599 Query: 445 AEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN----LAIQVTVESLIRPRFQRWLRD 500 ++P+ + G + I +W + L++ V+ + F L Sbjct: 600 GRFIPIAEETGFIVALGGWVLREAIRQGAHWQAQGIRLSLSVNVSATQFHQANFIDLLAQ 659 Query: 501 TLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKE 560 L + R+ +EL E+ + Q++ + + ALGVR+A++ G S +++K Sbjct: 660 WLDET-GLPPGRLELELTESILIQNVEETLRRLENLVALGVRLAIDDFGTGYSSLAYLKR 718 Query: 561 LNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVT 620 + LK+ V +I + + +++ S +V A GV + + Q L+ G Sbjct: 719 FPIHKLKIDRSFVCDIPHDESDTAIATAVIGLASVLKLRVIAEGVETDIQRQFLLDAGCH 778 Query: 621 GGQGDFFASSQPLDTNVKKYSQ 642 QG A + + + +Q Sbjct: 779 EFQGYLCAPALEPAAFLARIAQ 800 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 165/442 (37%), Gaps = 12/442 (2%) Query: 208 NAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFN 267 Q + IR A D TGL NR ++L +L + T +++ + L F Sbjct: 285 EDVTQRKVNEEQIRRLAYYDNLTGLPNRALLMDRLEQMLTKARRDKTRVVLLFLDLDRFK 344 Query: 268 MLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK-EAESIAG 326 +++DT GH+ ++ + N L + LAR +F L + +A Sbjct: 345 VINDTMGHAHGDQLLVQVANRLRQALR--SSDTLARIGGDEFVVLFTLEGPQLNVSPLAQ 402 Query: 327 QLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIY 385 LI ++ ++ D IGI + G D ++ A+ A A GG + Y Sbjct: 403 HLIDSITSVYPISGRDVYASTSIGIATFPDDGGDCNSLLRCADMAMYAAKEGGGKGYHFY 462 Query: 386 DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVS 443 + K + T + L R L +P V R+G++ E + R D + Sbjct: 463 SPEMNLKAHARMEMETNLRHALEREEFFLEFQPIVNARDGRLVGAEALLRWSDPEKGLIM 522 Query: 444 SAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWL 498 ++ + + G + ++ W E L ++ V+ + F + Sbjct: 523 PDMFIQVAEESGFIVPLGEWVLRTACRKMKDWREAGLPPFRISVNVSGRQFCQANFTDTV 582 Query: 499 RDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWI 558 + + + +E+ E + + + + L + + ++ G S ++ Sbjct: 583 CSIIRET-GMDPSFLALEMTETSLMVDVEATAKALMQLKELDISIVIDDFGAGYSSLGYL 641 Query: 559 KELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRG 618 ++ ++ +K+ +R++ ++ +V++++ + QV A GV + + L ++G Sbjct: 642 QKFPIDRIKIDRSFIRDLSSHANDKAIVEAIIAMAARLKLQVVAEGVETSEQLDFLKEQG 701 Query: 619 VTGGQGDFFASSQPLDTNVKKY 640 QG +F + Sbjct: 702 CHEIQGFYFHRPLSEELFKTLL 723 >UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G31_THICR Length = 891 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 85/475 (17%), Positives = 181/475 (38%), Gaps = 15/475 (3%) Query: 179 ERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTL---IRSYAAQDVKTGLNNR 235 R T +++ L EI N + +L + A D T L NR Sbjct: 413 SRYFEFTVTPLVDGSGQLNSVIQLGHEITNYLDIQEQLQQQKNDLDFIAYHDPLTDLPNR 472 Query: 236 LFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMR 295 + F ++L + ++ ++ I L F ++D++GH+ + L + Sbjct: 473 ILFLDRLTQAIHQAQRNHDKVALLFIDLDRFKEINDSFGHASGDLVLIECGKRLKKAIRE 532 Query: 296 YPGALLARYHRSDFAALLPHRTLKEAE-SIAGQLIKAVDTLPNNKMLDRDDMIHIGICAW 354 +AR +F L+ ++ ++IK + IGI + Sbjct: 533 I--DTVARLGGDEFTILIDELKTNNVIINVVKKIIKTLSDPIFVNENIFHITASIGISIF 590 Query: 355 R-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPR 413 G D Q++++A++A A G N++ Y + E+ + + L Sbjct: 591 PNDGTDANQLLQNADAAMYQAKEDGKNTYHFYTKEMTEQAYNRLLMENNLRDALDNQQFE 650 Query: 414 LYQKPAVTRE-GQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPL 471 LY +P V ++ E + R + ++P+ + GL + I+ Sbjct: 651 LYYQPQVDITTNKIVGFEALVRWNHEQKGIIPPDHFIPLAEETGLIIPLGKQIIAMASQT 710 Query: 472 LRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHI 526 + W + NL AI V+ + L RF L L + Q I IE+ E+ V Q+ Sbjct: 711 ISEWHQANLTNARIAINVSAKQLRDSRFFHNLNTALNK-NNCQPDWIEIEITESSVMQNP 769 Query: 527 SRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLV 586 ++ + G+ ++++ G S +++K+L + +K+ V N+ + ++ + Sbjct: 770 ELAIKLLSKLRRKGITISIDDFGTGYSSLAYLKKLPITKVKIDRSFVSNLPQDKDDAEIT 829 Query: 587 QSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 ++++ + + A G+ ++ + ++Q G QG +++ K Sbjct: 830 KAIISMSQSLNLDIIAEGIETQEQQNFVLQEGCKLIQGYYYSRPLTKKAMTAKLE 884 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 86/508 (16%), Positives = 181/508 (35%), Gaps = 17/508 (3%) Query: 148 IVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQ 207 F W G E + R N + T I Sbjct: 552 YDADFYREMWDTLLTTGHWEGELWSRRKNN----ELHPKWLSISAVYDQRGRITHYVGIS 607 Query: 208 NAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFN 267 N + + D T L N L F ++L + + +++ L F Sbjct: 608 NDLTATKQTQEKLEELTHYDQLTSLPNILLFRDRLQQAMARARREEHKVALLIFDLDRFK 667 Query: 268 MLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAG 326 ++D+ GHS + + L + + R +F LL + A A Sbjct: 668 EVNDSLGHSVGDLVLTEVAQRLRQQL--SLADTICRPGGDEFYLLLGRLTDIDTAVQAAQ 725 Query: 327 QLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIY 385 +++ IGI + G++ E +++ E+A +A GGNS+ + Sbjct: 726 NVLELFSKPFQAADHQLYLTPSIGITLFPDDGEEVESLIQSVETAMYHAKKDGGNSFQFF 785 Query: 386 DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQ-VHHRELMCRIFDGN--EEV 442 +++ G + + + + + LY +P + +G+ V E + R V Sbjct: 786 QETMFTAALGRMTMKNRLRRAVELEEFELYYQPKIAADGRTVVGAEALIRWVQPERGGPV 845 Query: 443 SSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRW 497 S AE++P+ + GL + + W + L A+ ++ +P Sbjct: 846 SPAEFIPLAEETGLIIPIGEWVLRQACRQSLLWQQAGLPPLRIAVNLSAVQFKQPGLDDE 905 Query: 498 LRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSW 557 + L + + + +E+ E+ + + ++ + + +G+ +A++ G S S+ Sbjct: 906 INWILQE-IGLPAELLELEITESLLMEDVTTANATLWKLKDMGIHLALDDFGTGYSSLSY 964 Query: 558 IKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQR 617 +K ++ LK+ VR++ E++ ++ +++ +V A GV + L QR Sbjct: 965 LKNFPLDTLKIDREFVRDLSTDDEDRAVIITIITLAHSLKMEVVAEGVEDADQVAFLRQR 1024 Query: 618 GVTGGQGDFFASSQPLDTNVKKYSQRYS 645 G QG F+ P + + + Sbjct: 1025 GCDVFQGYHFSRPLPAKEFEQFLRSQNA 1052 >UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Geobacter RepID=C6E7Z7_GEOSM Length = 721 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 95/523 (18%), Positives = 198/523 (37%), Gaps = 15/523 (2%) Query: 130 YFHSLMTTAPLTGAIGFI--IVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGT 187 + +L TA +T + I F + + Q L + + + + + Sbjct: 175 FRKNLRWTATVTLLFMLVTVIAAYFFSAKLQQMISRPLLDLLSSMKDVSASKNYAIRVAK 234 Query: 188 IYEWPPRT-SSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLL 246 + + +L EI+ + + ++ A D T L NR F ++LA L Sbjct: 235 PSDDEIGLLYDGFNEMLSEIEERNQILRQRQAHLQQLAHYDPLTRLPNRTLFYDRLAQAL 294 Query: 247 EDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHR 306 E+ V+ I L F ++DT GH + + N LST + +AR Sbjct: 295 NQAERNRQALSVIFIDLDHFKDINDTLGHRTGDLLLIDVANRLSTVVR--SCDTVARLGG 352 Query: 307 SDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVM 364 +F + A +A +L + IG+ + G+ ++++ Sbjct: 353 DEFTVFTQNVMNADNAAIVAAKLNALFAKPFQLGESEIYVTASIGVTLFPNDGKTVDELL 412 Query: 365 EHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-E 423 +A+ A +A G N + ++D + E V + + L R L+ +P V Sbjct: 413 MNADIAMYHAKACGKNVYKMFDRKMNEHANERVTLLSDLRLALEREEFVLHYQPKVDLLT 472 Query: 424 GQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-- 480 G V E + R ++ +++ + + G E + + W E+NL Sbjct: 473 GNVTSVEALVRWMHPRLGMLAPDKFIRLSEESGFIVELTDWVLRTACTQAKKWQEQNLGS 532 Query: 481 ---AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVN 537 A+ ++ R + + L + + IE+ E+ + Q+ + R + Sbjct: 533 VRVAVNLSPYHFQRQDVKEAIFSVL-DATGLEPALLEIEITESALMQNDEYTCALFRELR 591 Query: 538 ALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTS 597 LG+ ++V+ G S S++ + LK+ + N+ K +E+Q +V +++ + Sbjct: 592 ELGMTISVDDFGTGYSSLSYLHRFPINTLKIDRTFILNMMKSSEDQAIVTAIIAMAKSLN 651 Query: 598 TQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 Q+ A GV + + + L +G QG + ++ + + Sbjct: 652 MQIVAEGVETVDQLEKLKDQGCHEIQGFLVSRPVAAESVTQFF 694 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 84/479 (17%), Positives = 174/479 (36%), Gaps = 12/479 (2%) Query: 170 TRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVK 229 + + + G + R L + + + Q + ++ A D Sbjct: 309 WQGEMLDRRKGGQWYPAELSISALRDEDGLLSNYVAVFSDITQRKEAEERLQFLANHDPL 368 Query: 230 TGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLL 289 T L NR L L + VM I L F +++D++GH ++ + L Sbjct: 369 TRLPNRSRLTASLDEALTRMDGEDGRLAVMFIDLDRFKLINDSFGHQVGDQLLCEIAIRL 428 Query: 290 STFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLIKAVDTLPNNKMLDRDDMIH 348 S + +LAR +F L+ + +A ++ A+ + + Sbjct: 429 SRVVGERG--MLARLGGDEFTLLMSGFDSHHQLADMASDILAALGKPLCLEAHEVFITGS 486 Query: 349 IGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQML 407 IGI + G+D ++++A+ A A G N++ +D + + + + L Sbjct: 487 IGISVFPHDGRDARTLLKNADVAMYRAKEAGKNTYQFFDIGMNTQTFERLLLENGLRMAL 546 Query: 408 SRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQI 465 R L+ +P ++ E + E + R V A ++ + + GL + + Sbjct: 547 ERHEFELHYQPQLSAGERALAGAEALLRWRHPQLGLVPPARFIALAEETGLIKPIGDWVL 606 Query: 466 SRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEA 520 L W + L A+ ++ +P + +Q R+ +E+ E+ Sbjct: 607 REACRQLAAWDAQGLRVPRLAVNLSPRQFGQPSLPAKVAGA-LQAAGLAAGRLELEITES 665 Query: 521 DVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRT 580 + Q + ++ + +LGV ++++ G S S +K ++ LK+ V + Sbjct: 666 MIMQSPTEAVSLLSELKSLGVWLSIDDFGTGYSSLSHLKRFPLDTLKIDQSFVEGLPDDD 725 Query: 581 ENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKK 639 +N + ++++ QV A GV S + L +G QG F P Sbjct: 726 DNAAIAEAILAMAKKLKFQVVAEGVESEEQAAFLEGKGCHVLQGYHFGRPLPAGEFAAL 784 >UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L753_EXISA Length = 819 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 115/669 (17%), Positives = 236/669 (35%), Gaps = 38/669 (5%) Query: 1 MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATA------IDTHLV 54 M + + AFV L GL I + S + S + VA + + Sbjct: 155 MWVASAIVAFVASLVGLYILFYIPNVSRFHWR---RLASSVLIGVAVSGMHYVGMGAARF 211 Query: 55 SNDFSVLRPQITELMMS---ADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPL 111 + +P + S A ++ ++ +Y R S S +L + + Sbjct: 212 TPMEGAAKPVSDYAVDSTLLAYVIAASVMTLFILMYISLRTASQLEAQSEELELKFESII 271 Query: 112 IKHPGMSLRLVYQDPMGNYFHSLMTTAP-LTGAIGFIIVMLFLAVRWLQRQLAGQELLET 170 + + + + T + ++ + R+ + G E Sbjct: 272 ESASDAIIVADHNRTILQWNQGATDLFGYTTDEMVGQSIVAIIPERFREAHERGMRRYEA 331 Query: 171 RATRILNG---------ERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIR 221 + + G + G V + +T + I + R++ I Sbjct: 332 TGEKRVIGQTVELIGLRKDGVEVPIEMSLGTWKTDKGI--FFSSIIRDISERKRIEAQIN 389 Query: 222 SYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQ 281 D TGL NR F ++L LL + + I L +F +++D +GHS ++ Sbjct: 390 DLVYLDPLTGLPNRRLFSDRLDALLGQSQ--SEQFALYYIDLDNFKVINDRFGHSIGDQF 447 Query: 282 FFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKML 341 +T + + + + LAR +F L P A A +LI + + Sbjct: 448 LKQVTTRIQSTIQKT--DTLARLGGDEFIILSPDTKSNLAAHRAQELINVLHPPFELENE 505 Query: 342 DRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWR 400 + IGI G E+++++A+ A A G N + + + L E Sbjct: 506 EVFTGASIGISLHPSDGDTAEELIKNADIAMYRAKADGKNGYQFFTNELNESVSRRSNLS 565 Query: 401 TLIEQMLSRGGPRLYQKPAVTREGQ-VHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSE 458 + + + RG ++ +P + E + V E + R +S E++P+ + G Sbjct: 566 MALRKGIGRGEFTVHYQPQIQLETEMVIGMEALVRWNHPELGMISPGEFIPIAEETGSIH 625 Query: 459 EYDRLQISRLIPLLRYWPEE-----NLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRI 513 ++ + W + +A+ ++ + + L + + + Sbjct: 626 RLGEFVLNEACRQNKAWQDASIPPFRVAVNISAVQFAQKDLPEVVSRALA-ASGLEAQYL 684 Query: 514 IIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLV 573 +EL E+ + Q R + + ALGV ++++ G S S++K ++ LK+ Sbjct: 685 ELELTESVI-QSADRAIETMHELVALGVHLSIDDFGTGYSSLSYLKLFPIDTLKIDQHFT 743 Query: 574 RNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 +NIE ++ LV++++ V A GV + ++ L QG F+ P Sbjct: 744 KNIESDEKDAALVKTIIRMAHELDLNVIAEGVETENQVAFLKAESCNQAQGYFYNRPLPA 803 Query: 634 DTNVKKYSQ 642 + + Q Sbjct: 804 EEIEVFFQQ 812 >UniRef50_Q0AAU4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU4_ALHEH Length = 723 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 92/455 (20%), Positives = 183/455 (40%), Gaps = 15/455 (3%) Query: 198 ALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGI 257 + R++ + ++++ A D+ TGL NR ++LA L + Sbjct: 268 GTYGIARDVTD----RKHAESIVHYQAHHDLLTGLPNRALLKDRLAQALARARRGNEEVA 323 Query: 258 VMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR- 316 V+ + L F +++D+ GHS ++ + L + G LAR +F LLP Sbjct: 324 VLFLDLDRFKVVNDSLGHSVGDQLLQQVAQRLRACLRE--GDTLARLGGDEFTLLLPAIP 381 Query: 317 TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAG 375 E +A + I A++ + IGI + G+ E +++HA+ A + Sbjct: 382 DRPAVERVAQKCIDALEQPFMVHNHRLFLGVSIGIALFPEHGETLETLIKHADVAMYHVK 441 Query: 376 LQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCR 434 G + +D ++ + ++ T + + L + R+ +P V G+V E + R Sbjct: 442 EHGKGHYTFFDQAMGSRIDHHLNMETGLRRALEQHEFRVAYQPQVDVVSGRVTGMEALIR 501 Query: 435 IFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPE----ENLAIQVTVESL 489 EVS E++P+ Q GL + L WP+ LA+ ++ + Sbjct: 502 WQHPETGEVSPREFIPVAEQTGLILPIGEWLLRSACEELLRWPDGNEGLRLAVNLSPLQV 561 Query: 490 IRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAG 549 + F +R + +R+ +E+ E + + + + +R ++ LGV + ++ G Sbjct: 562 HQRDFVDRVRAICDET-GFPLRRLDLEITENLLMRDVESVVEKLRTLSRLGVTITIDDFG 620 Query: 550 LTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRS 609 S +++ L + LK+ V I + E LV++++ G V A GV ++ Sbjct: 621 TGYSSLGYLQRLPIHALKIDQSFVHAIRENEEKGTLVETIIAMAHGLGLNVVAEGVETKR 680 Query: 610 EWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRY 644 + L + QG +F+ V Sbjct: 681 QLDYLRRLQCGRMQGFYFSYPLSGHEAVDLLEGWA 715 >UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YA12_9BURK Length = 786 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 109/656 (16%), Positives = 224/656 (34%), Gaps = 39/656 (5%) Query: 8 SAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLV----SNDFSVLRP 63 S L + + + + ++ S AV V S++ + L Sbjct: 135 SGLWYLASSIALIGLFASITGLYFTRRLNAISKVADAVQAGDTGRRVDIKGSDEAARLAQ 194 Query: 64 QITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVG---SSDLFRELSVPLIKHPGMSLR 120 + ++ + +L+ + A V +D + + Sbjct: 195 EFNAMLDTLQQREQELVQSRDALRIAATAFESNDVMFVCDADWRI-----------LQVN 243 Query: 121 LVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGER 180 +Q G + AP I F V + G E R Sbjct: 244 SAFQRVTGYLPEEAIGKAPRDLMGSGIQTQEFYEVMNESIRSNGSWQGEVWDRRKNGETY 303 Query: 181 GSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDN 240 + T + L + + I++ D T L NR Sbjct: 304 PAWTTITAVRSESGDVTHYVANLSDFS----ARKAAENEIKTLVYFDSLTMLPNRRMLMG 359 Query: 241 QLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGAL 300 +L T + G G ++ + L DF L+DT GH Q + + N L + + Sbjct: 360 RLETAMHAALSTGHLGALLFVDLDDFKTLNDTLGHHQGDILLQQVANRLQSCVRE--ADT 417 Query: 301 LARYHRSDFAALLPHRTLK------EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAW 354 +AR +F +L + +AE++AG++++A++ + L R +GI + Sbjct: 418 VARLGGDEFVVMLEGLSKDVAEASTQAEAVAGKVMQALNQPYDLGTLTRSSTPSVGITVF 477 Query: 355 R-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPR 413 + ++ ++ A+ A A G N+ ++D + L Sbjct: 478 GKQQESLDEPLKRADLAMYQAKAAGRNTSRLFDPKTQAAVTLRADLEAALRTALEEEQFV 537 Query: 414 LYQKPAVTREGQVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLL 472 LY +P ++ + +V E + R V E++ + G+ ++ L Sbjct: 538 LYLQPQISEDVRVTGAEALIRWQHPTRGLVMPGEFIAVAEDCGMIVPIGNWVLNTACKQL 597 Query: 473 RYWP------EENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHI 526 W +A+ V+ + + F + D L + +Q + IE+ E+ + ++ Sbjct: 598 ALWATQPAFAHMTIAVNVSAKQFHQHDFVEQVLDALSR-HGAQASGLKIEITESMLIANV 656 Query: 527 SRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLV 586 + + + GV A++ G S +++K L +++LK+ VR++ T + + Sbjct: 657 DDVIVRMEELQHHGVGFAMDDFGTGYSSLTYLKRLPLDVLKIDQSFVRDVLVDTNDAAIA 716 Query: 587 QSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 +V + V A GV + + Q L + G QG F+ P++ + Sbjct: 717 NMIVALANSMGLSVIAEGVETVEQMQYLARHGCHAYQGYLFSRPVPVERFETSLAD 772 >UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=B1XZW3_LEPCP Length = 1069 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 102/530 (19%), Positives = 196/530 (36%), Gaps = 18/530 (3%) Query: 124 QDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGERGSN 183 G+ LM P G + ++ + Q G E R R G+ + Sbjct: 530 TRSTGHDLIELMGGDPAELLAGADARQTWQSL-VERVQTRGSWQGEVRICRRAGGDYPAW 588 Query: 184 VLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLA 243 +L S +I + +E R IR A DV T L NR +L Sbjct: 589 LLANAVRDRAGHVSHWVCTSIDITDRKESERR----IRFLAEHDVLTELPNRALCIERLR 644 Query: 244 TLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLAR 303 L+ + G V+ I L F ++D+ GH + ++ L + G ++R Sbjct: 645 LALQQARRTGQKVAVLFIDLDRFKNINDSLGHHVGDGLLRSVAQRLVDGVR--AGDTVSR 702 Query: 304 YHRSDFAALLPHR-TLKEAESIA-GQLIKAVDTLPNNKMLDRDDMIHIGICAWRSG-QDT 360 +F +L ++E + +LI V + + +GI + QD Sbjct: 703 LGGDEFVVVLNGLADIEEVAHVVEQRLIPRVRQPHGVQGAEIHVSCSVGISVFPDDAQDI 762 Query: 361 EQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV 420 +++M A+ A A QG N + + ++ + + + +++G L+ +P + Sbjct: 763 DELMRQADVAMYQAKAQGRNGAQFFTAEMNQRAQARLMVENHLRSAVAQGQLSLHYQPRI 822 Query: 421 T-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE 478 +G+V E + R V ++P+ + GL E I + W + Sbjct: 823 HVADGRVAGVEGLLRWHSPELGHVPPDRFIPVAEETGLIIEIGAWVIEAACAQIERWRGQ 882 Query: 479 NL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVI 533 L +I ++ L P LR +L + ++ +EL E+ + + + Sbjct: 883 GLQEVAVSINLSALQLRDPGLLDVLRASL-ERHAVPPGQLELELTESILMDQVDAHLVTL 941 Query: 534 RLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEAC 593 + LG+R++++ G S +++ ++ LK+ VR++ + ++++++ Sbjct: 942 HALRELGLRLSIDDFGTGYSSLNYLTRFPIDQLKIDRSFVRDMLDDPRDLAIIKAIIGLG 1001 Query: 594 SGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 +V A GV E Q L G QG FA DT Sbjct: 1002 HTLGLKVVAEGVERELEVQALRAAGCDELQGYHFARPMAADTATAWLLDW 1051 >UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BR92_9GAMM Length = 944 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 78/499 (15%), Positives = 191/499 (38%), Gaps = 19/499 (3%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F W +G E R + + + ++ Sbjct: 452 FYRSMWQMINTSGYWRGEIWNRRKNGEVFPQWLSIQAVTDSAGMARNYIASITDLTE--- 508 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKV-GTHGIVMMIRLPDFNMLS 270 +++ +R + D T L NR ++ L + ++ I L F ++ Sbjct: 509 -RKQVEEKLRYLSDFDPLTNLPNRRLLGYRVDQTLSLSRRQPDQQFALLYIDLDHFKNIN 567 Query: 271 DTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT-LKEAESIAGQLI 329 D+ GH +E + ++ + G ++R +F L+P L++A ++A +++ Sbjct: 568 DSLGHRFGDEILQKVAKRITELVRE--GDTVSRLGGDEFMILMPELHKLEQAANLAERIL 625 Query: 330 KAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDS 388 + N +GI + G ++++ +A++A A QG N++ Y Sbjct: 626 HNIAQPLENDSH-LMITPSVGIAVYPNDGDSFDKLLRNADAAVHFAKRQGRNNYQFYTAE 684 Query: 389 LPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG-NEEVSSAE 446 + ++ ++ + + + L+ +P + R+G + E + R V Sbjct: 685 MNQRASERLQVEISLRKAVENQEFELFYQPQLNLRDGSLAGVEALIRWRHPNEGLVPPNR 744 Query: 447 YMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE-----NLAIQVTVESLIRPRFQRWLRDT 501 ++P+ + GL + + W + +++ V+V P +R Sbjct: 745 FIPLAEETGLILQIGSWVLVEACRQGAEWAAKSTEPFTMSVNVSVRQFR-PELVEEVRSA 803 Query: 502 LMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKEL 561 L+ K ++IE+ E+ + Q + ++ + LGV+++++ G S +++K Sbjct: 804 LL-TSGLSPKSLVIEITESTLMQDEEKTLTLLHELKELGVQLSLDDFGTGYSSMAYLKRF 862 Query: 562 NVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTG 621 N++ LK+ + ++ + ++ + ++++ S A G+ + + L G Sbjct: 863 NLDQLKIDRAFISDLPQNPDDAAITSAIIDVASHFGLVTVAEGIEKPEQAEFLASVGCIE 922 Query: 622 GQGDFFASSQPLDTNVKKY 640 GQG ++ P + ++Y Sbjct: 923 GQGYYYEKPIPANDLTERY 941 >UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9S8_MAGSM Length = 971 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 87/499 (17%), Positives = 184/499 (36%), Gaps = 16/499 (3%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F W Q G E R + + +I Sbjct: 467 FYTQMWHALQQDGAWEGEIWNRRKSGETYPEWLSIATVTNDKGETVQYVAAFSDITK--- 523 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 + + I A D T L NR F ++L T L+ ++ G ++ I L F ++D Sbjct: 524 -RKQAEETILHQANYDFLTDLPNRNLFHDRLQTELKRSQRSGQQVALLFIDLDRFKFVND 582 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIK 330 T GH+ ++ + L + +AR +F +LP + +A +I Sbjct: 583 TLGHNVGDQLLREVAIRLGHCVRE--SDTIARLGGDEFTVILPELHGPEGVARLAQGMID 640 Query: 331 AVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSL 389 ++ + + IGI + + ++++A+ A A G S+ Y + Sbjct: 641 KLEERYCIQDHELFISASIGITIYPEDADNMMDLVKNADVAMYRAKENGRGSFCFYTAEM 700 Query: 390 PEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFDGNEE-VSSAEY 447 R + + L G ++ +P V + G + E + R + E V ++ Sbjct: 701 NADARQLHKIEQALRVALEEGQFWIHYQPYVQQSSGLITGVEALIRWRNSAGEIVYPDQF 760 Query: 448 MPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTL 502 +P+ + GL + +I ++ W E ++ V+ ++ L Sbjct: 761 IPVAEETGLIVPIGLWVLRSVIGVIAQWQREGHPDITFSVNVSARQFQEGHLVGQIKAAL 820 Query: 503 MQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELN 562 + + + +++E+ E+ + + +++ + ALGVRVA++ G S ++K+ Sbjct: 821 QE-NQINPQSLMLEITESLMIRDPEHTLNMLKEIKALGVRVALDDFGTGYSSLGYLKQFP 879 Query: 563 VELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGG 622 ++LLK+ + I +++ +V ++V V G+ + + Q + Sbjct: 880 IDLLKIDRSFINGIANSQDDETMVSAIVSMAHSLGVGVIGEGIENDQQLQRVNLHACDYV 939 Query: 623 QGDFFASSQPLDTNVKKYS 641 QG F++ P D + Sbjct: 940 QGFFYSRPMPYDELALFFE 958 >UniRef50_Q21UE9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Comamonadaceae RepID=Q21UE9_RHOFD Length = 1114 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 103/577 (17%), Positives = 203/577 (35%), Gaps = 25/577 (4%) Query: 74 IVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHS 133 + ++ + AR + + S + + + S + + P NY Sbjct: 543 DITARKQSEERLRESEARFRALTELSSDWYWEQDAQFRFVRLDGSSQTSMRLPEDNYLGV 602 Query: 134 LMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPP 193 G + A R + + E T + + GT Sbjct: 603 TRWETDAQGVSQA----QWAAHRAVLQAHETFHDFEMLCTDAVGCLTWVAISGTPIFDVQ 658 Query: 194 RTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVG 253 + R+I R + I A DV T L NR ++L L + Sbjct: 659 GQFKGYRGIGRDISE----RKRAEEKIERLAFYDVLTDLPNRRLLMDRLQQALVSSAREH 714 Query: 254 THGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL 313 G ++ I L +F L+DT GH + + L + +AR +F +L Sbjct: 715 GAGALLFIDLDNFKDLNDTQGHDVGDALLQQVAKRLLASVRET--DTVARLGGDEFVVML 772 Query: 314 PHRTLKEA------ESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEH 366 +A E + +++ ++ + IG+ + + Q + +++ Sbjct: 773 QGLERTQADAITQVEQVGRKIMAQLNQPYRLGSAEHHSTPSIGVTLFDNQQQTLDDLLKQ 832 Query: 367 AESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQV 426 A+ A A G N+ +D ++ + L+R L+ +P V ++ +V Sbjct: 833 ADLAMYEAKSAGRNTLRFFDPTMQALVTQRTALELELRHGLARDELVLFYQPVVDQDARV 892 Query: 427 HHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE------N 479 E + R V+ ++PM Q GL + + L W + Sbjct: 893 VGVEALVRWQHPQRGLVAPLAFIPMAEQTGLILPLGQWVLRVACLQLVSWSAQAATERLT 952 Query: 480 LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNAL 539 +A+ V+ +P F + + L Q + KR+ +EL E+ + + + + Sbjct: 953 MAVNVSARQFRQPEFVQQVLTMLRQT-GANPKRLKMELTESLLLTDTQDAIAKMSELRDV 1011 Query: 540 GVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQ 599 GVR +++ G S S++K L ++ LK+ VR++ + + ++++ Sbjct: 1012 GVRFSLDDFGTGYSSLSYLKLLPLQQLKIDQSFVRDVLTDPNDAAIARTVLALGQSLGLG 1071 Query: 600 VYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTN 636 V A GV + + L+Q G T QG F P+ Sbjct: 1072 VVAEGVETVGQRDFLLQHGCTRFQGYLFGKPVPIAQL 1108 >UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT6_BREBN Length = 816 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 80/473 (16%), Positives = 190/473 (40%), Gaps = 16/473 (3%) Query: 177 NGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRL 236 NG R + + ++++I +R+ IR A D T L NR Sbjct: 339 NGNRVELSVLNVPVEIEGEVVGNHIIVKDITE----ENRVKEKIRYLAYHDELTDLPNRR 394 Query: 237 FFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRY 296 F+ L +E + + VM+I + F M++D+ GHS + +++ +S Y Sbjct: 395 KFNQVLHQSIEKSSQDSSSFAVMVIDIDRFKMINDSLGHSYGDIFLQGVSDRISKSAKGY 454 Query: 297 PGALLARYHRSDFAALLP-HRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR 355 +AR +F L +EA S+A ++I+A+ K + IG + Sbjct: 455 HA-TIARMGGDEFTILCETGADGREAASLADKIIEALKQPFTLKDSEFYISASIGTAIFP 513 Query: 356 S-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRL 414 G D +++ A++A QG N Y + N+ + + + R + Sbjct: 514 DHGTDAVALLKKADTAMYEVKKQGKNGHLFYTTDFDAQLLENIEIERDLRKAIERKELVV 573 Query: 415 YQKPAV-TREGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLL 472 Y +P + ++ E + R +S ++P+ + GL E + + Sbjct: 574 YYQPQFHSESNRMIGVEALVRWNHPTKGMLSPGVFIPIAEETGLIYEIGTWVLREACRQM 633 Query: 473 RYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHIS 527 + W ++ +++ ++ + +++++ L + K + +E+ E+ + + Sbjct: 634 KQWHDKGGPLIPVSVNLSSHQFHQRNLVQYIKNILEET-KLAPHFLELEITESMMM-DPA 691 Query: 528 RLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQ 587 ++ +N +G R++++ G S S++K+ + LK+ + ++ + ++ +V Sbjct: 692 VSISILHELNKIGTRISLDDFGTGYSSLSYLKKFPIHKLKIDRSFITDLSRNENDKAIVA 751 Query: 588 SLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 +++ V A G+ ++ + L + QG +++ + + + Sbjct: 752 TIISMAKHLKLDVIAEGIETKDQLDILTENHCKEIQGYYYSRPLSANEVEQSF 804 >UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JW23_DESAC Length = 951 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 96/611 (15%), Positives = 218/611 (35%), Gaps = 41/611 (6%) Query: 42 VQAVATAIDTHLVSNDFSVLRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSS 101 + AV + + V F +L+ ++ +A V + + + + Sbjct: 370 IGAVISWLVRRQVRQMF-LLQRDKELILNAAGDGIVGVDRTGRASFVNPAAARMLGYDAE 428 Query: 102 DLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQ 161 D R V I + N H + P++ R L++ Sbjct: 429 DFLRRYVVETI-----------PVVLANGEHVMEQDHPISQT------------RQLEQG 465 Query: 162 LAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTL-- 219 L + L+ R + T + +++ ++ RL+ Sbjct: 466 LCVRSDLDA-FRRRDGTIISVEYVATPLIGSAGQHEGAVLIFKDLTRQQQAEERLEEKKQ 524 Query: 220 -IRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQV 278 + + D TGL NR F ++L +E + + V+ I L F ++D+ GH Sbjct: 525 LLDHMSNHDSLTGLPNRRLFQDRLYHAIERARRSSSEMSVLFIDLDRFKKINDSLGHELG 584 Query: 279 EEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE-AESIAGQLIKAVDTLPN 337 ++ ++ + + + R LAR +F +L + A IA L+ + + Sbjct: 585 DKLLISVARRMQSHLRR--SDTLARLGGDEFVVILEESSHSHFAAVIARNLLNELSEAFD 642 Query: 338 NKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGN 396 + IGI + +D +M A++A +A +G N++ Y + + + Sbjct: 643 VESHRLFVTASIGISRYPYDAEDVVGLMSSADAAMYHAKSRGRNNFQFYAPEMNGRAQDF 702 Query: 397 VRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQF 454 + T + L+ +Y +P R+ + E + R V +++ + + Sbjct: 703 LEMETQLRDALALEQFEVYYQPQYDMRDQTLVGAEALLRWNHPERGMVPPGDFIALAEET 762 Query: 455 GLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQ 509 G + ++ R W +E L A+ +++ + L L Q Sbjct: 763 GAIVPIGEWVLMQVCRQNRQWMDEGLTPVRVAVNISIAQFR-SNLSQTLEQVLEQ-SGMP 820 Query: 510 RKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLH 569 + + +E+ E+ + + ++ + G+ ++++ G S S++++L V+ LK+ Sbjct: 821 AELLELEITESMLMEDEEETITLLNELKEKGLHISIDDFGTGYSSLSYLRKLPVDKLKID 880 Query: 570 PGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFAS 629 + ++ + + S++ ++ A GV + L+Q QG +A Sbjct: 881 RSFIAHVVHNQSDAAITGSIIALGQNMDLRILAEGVEHEEQRDFLLQHRCYIAQGFLYAR 940 Query: 630 SQPLDTNVKKY 640 + V+ Sbjct: 941 PMTAEDFVRLL 951 >UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KCA9_AZOSB Length = 689 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 85/493 (17%), Positives = 179/493 (36%), Gaps = 17/493 (3%) Query: 157 WLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRL 216 + + E R V G W R A + ++ + Sbjct: 196 ARRARGEPGHPFELTGLRRDGSHFPFMVFGAPSTW--RGQPASVGTVFDLSEIKA----A 249 Query: 217 DTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHS 276 + IR A D TGL NR +++ +L + +M I L F ++D+ GH Sbjct: 250 EDRIRQLAYFDPLTGLPNRSLLEDRAGQVLVRAGRDRRAATLMFIDLDRFKTVNDSLGHL 309 Query: 277 QVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLP 336 ++ L + +AR +F L P + A +A ++++ Sbjct: 310 MGDQLLRLAGQRLRDSVR--LSDTVARLGGDEFIVLAPDTGAEGAVRLAEKILEVFAAPF 367 Query: 337 NNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRG 395 + + IGI + G+D +++ A+ A A +G N + ++ + Sbjct: 368 DLDDRELTISPSIGIARYPDDGKDFPALLQSADIAMYQAKREGRNGFRMFSIEMNAPILE 427 Query: 396 NVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQ 453 ++ T + + L G L +P V G++ E + R E+S ++P+ + Sbjct: 428 SLLLETQLRRALDHGQLSLVYQPMVDIASGRIVGAEALLRWQHPQHGEISPVRFIPVAEE 487 Query: 454 FGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKS 508 GL + + + ++ W +A+ ++ R + L+ Sbjct: 488 SGLILPIGEWVLEQALGQVQRWRAAGHPDLVMAVNLSALQFERLNISNTVLR-LLDHYGL 546 Query: 509 QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKL 568 + +EL E+ + + R + + GVR++V+ G S +++ L + LK+ Sbjct: 547 PGSALELELTESVLMEDAERAVAAMLNLADRGVRLSVDDFGTGYSSLAYLTRLPLAKLKI 606 Query: 569 HPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFA 628 VRNI + + +++++ + +V A GV + ++ L + QG ++ Sbjct: 607 DRSFVRNIPSDASARSVARTILDLARSLALEVIAEGVENEAQLLLLREWCCDQAQGYLYS 666 Query: 629 SSQPLDTNVKKYS 641 P Sbjct: 667 RPVPARAFEALLR 679 >UniRef50_A8ZUW0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUW0_DESOH Length = 764 Score = 672 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 86/495 (17%), Positives = 188/495 (37%), Gaps = 22/495 (4%) Query: 165 QELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYA 224 L+ + + + + + + + R+I R + IR A Sbjct: 268 SRTLQLEIKKKDGTTVWTETKFSFVRDKNKQTVGILGVSRDITERR----LAEEKIRYLA 323 Query: 225 AQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFT 284 D T L NR F L ++ ++ V+ I L F +++DT GH ++ Sbjct: 324 THDNLTELPNRTLFGQMLGRAIKFAQRYQRQFAVLFIDLDRFKIINDTMGHDAGDQLLKE 383 Query: 285 LTNLLSTFMMRYP--------GALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTL 335 + + + +++ R +F L+ L + ++A +++ Sbjct: 384 IASRFRQSLRAVDVVGRLNEKDSVVGRLGGDEFVVLIEEVTNLSQVATVAQKILNTAIKP 443 Query: 336 PNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGR 394 + IGI + G+D +M+ A+ A A +G N++ Y + Sbjct: 444 MVLLGEECRVTASIGISVYPDDGEDERTLMKKADMAMYFAKEEGKNNFQFYSQNTHSPAF 503 Query: 395 GNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYMPMVL 452 + L R L + + + G + E + R + V+ +++P+ Sbjct: 504 ERFFVEAELRHALERNELYLDYQAKLDFKTGAITGSEALLRWRNPGLGLVAPTQFLPVAE 563 Query: 453 QFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEK 507 + GL R + W + L A+ +++ L+ + +R L + Sbjct: 564 ETGLIVPIGRWVMKTACAQNVAWQRQGLPPVTVAVNLSLRQLMDDKLIEDIRTAL-EASG 622 Query: 508 SQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLK 567 + +E+ E+ V + L ++ + +LGVR+A++ G S + IK L V+ LK Sbjct: 623 MAPNLLELEITESIVMHKPAPLIELLARIKSLGVRIALDDFGTGYSSLAQIKHLPVDTLK 682 Query: 568 LHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFF 627 + +RN+++ +++ ++++++ S V A GV + ++ L + QG +F Sbjct: 683 VDRSFIRNLQQNPDDREIIEAVIAMGRALSLNVIAEGVETLAQDTYLREHICDEMQGFYF 742 Query: 628 ASSQPLDTNVKKYSQ 642 + D S+ Sbjct: 743 SKPVAPDQFADLLSK 757 >UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation kinase n=2 Tax=Bacillaceae RepID=A3IAQ2_9BACI Length = 934 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 79/476 (16%), Positives = 195/476 (40%), Gaps = 18/476 (3%) Query: 174 RILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLN 233 R + + ++ + + + T ++I Q +L+ I+ +A D T L Sbjct: 466 RKDHSNFPVEYVTSLIKEGDKVVGEVIT-FKDIT----QRKQLEEKIKYHAYFDSLTDLP 520 Query: 234 NRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFM 293 NR+ ++L L+ + G V+ + L F +++D+ GHS + ++ LS + Sbjct: 521 NRVLLIDRLTQGLKYAKVNGEKLAVLYLDLDRFKLVNDSLGHSYGDLLLQSVAKRLSACV 580 Query: 294 MRYPGALLARYHRSDFAALLPHRTLK-EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGIC 352 A ++R +F LP+ + + + + + N + IGI Sbjct: 581 PE--DATVSRQGGDEFTIYLPNIKCENDILKVINCINASFSQPFNLIDNEIYIKTSIGIS 638 Query: 353 AWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGG 411 + +G TE ++++A++A + G S+ + + + + +++ + + L R Sbjct: 639 LFPKNGDTTETLIKNADTAMYKSKETPGTSYHFFSEGMDTRTFESIKLENDLYKALERDE 698 Query: 412 PRLYQKPAVT-REGQVHHRELMCRIFD-GNEEVSSAEYMPMVLQFGLSEEYDRLQISRLI 469 ++ +P + + ++ E + R + ++ ++P+ + GL + Sbjct: 699 LIIFYQPQINYKTNKIKGVEALLRWNHREHGMITPDRFIPLAEETGLIVPIGEWVLKEAC 758 Query: 470 PLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQ 524 L+ W + +++ ++V + + + L + + + + +EL E + + Sbjct: 759 KQLKEWHNQGYPLISMSVNLSVHQFEQNNLFSIIENVLYETD-LSPEYLQLELTENLIVK 817 Query: 525 HISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQL 584 + + +N LGV +A++ G S ++K L + LK+ V+ + + Sbjct: 818 NTEVTLKTMTQLNGLGVNLAIDDFGTGYSSLGYLKNLPISTLKIDKSFVQEMLTD-DAAA 876 Query: 585 LVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 + +++ +V A GV ++ + L+++ QG FF+ +KKY Sbjct: 877 ITNTIITLAQNLKLEVIAEGVETKEQADYLLEQNCHLMQGYFFSKPMKAGEIMKKY 932 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 91/496 (18%), Positives = 190/496 (38%), Gaps = 24/496 (4%) Query: 159 QRQLAGQELLETRATRI---LNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSR 215 QR + ++ L T + + T + + + R+I R Sbjct: 356 QRAMQTRQPLVYEETLTFAEDGYQGRFETIKTPIRDLHGRVTGVLGVCRDITE----RKR 411 Query: 216 LDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGH 275 I A D TGL NR ++L + ++ G ++ I L +F L+DT GH Sbjct: 412 AAQEIERLAFYDALTGLPNRRLLLDRLQRSIATCQRTHKLGALLFIDLDNFKDLNDTLGH 471 Query: 276 SQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLK------EAESIAGQLI 329 ++ + L + +AR+ +F +L +AE +A +L+ Sbjct: 472 DMGDQLLAQVATRLVASVR--AADTVARFGGDEFVVMLEALAPDLRTATAQAEMVADKLL 529 Query: 330 KAVDTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESATRNAGLQGGNSWAIYDDS 388 +++ + IG+ + + +++++ A+ A A G N+ +D Sbjct: 530 ASLNQPFALDGGQHYSTLSIGVTLFGEQRLSVDELLKRADLALYQAKAAGRNTQRFFDPD 589 Query: 389 LPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGN-EEVSSAEY 447 + + Q L+R +Y +P V + ++ E + R + A++ Sbjct: 590 MQAAVNARSNLEADLRQGLARAELLVYYQPVVDHQARLMGAEALVRWRHPQRGMIGPADF 649 Query: 448 MPMVLQFGLSEEYDRLQISRLIPLLRYWPE------ENLAIQVTVESLIRPRFQRWLRDT 501 +P+ Q GL + + L+ W + ++++ V+ +P F + Sbjct: 650 IPLAEQTGLILPLGQYVLQTACAQLQRWSQHPDTAGLSISVNVSARQFRQPGFVAQVLHQ 709 Query: 502 LMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKEL 561 L + + +R+ +EL E+ + I + + + GV A++ G S S++K L Sbjct: 710 L-KSHGADPRRLKLELTESLLLGDIEDTIARMAQLKSEGVGFALDDFGTGYSSLSYLKRL 768 Query: 562 NVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTG 621 ++ +K+ VR + + +V++++ QV A GV + + L G G Sbjct: 769 PLDQIKIDQSFVREVLADPNDAAIVRTILALAKSLDLQVVAEGVETTGQLSFLQLHGCEG 828 Query: 622 GQGDFFASSQPLDTNV 637 QG F P++ Sbjct: 829 FQGYLFGRPVPMEVFA 844 >UniRef50_Q2W8B7 Predicted signal transduction protein n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W8B7_MAGSA Length = 682 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 101/654 (15%), Positives = 232/654 (35%), Gaps = 51/654 (7%) Query: 19 IFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSN----DFSVLRPQITELMMSADI 74 V + R+ + A LV DF+ ++ Q ++ Sbjct: 27 TVVMFSAFEHYSVRDRLSALNSRLDSFAITQGAALVKPLWEFDFAAVQRQFQSYPDVPEL 86 Query: 75 VRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSL--------------- 119 + ++ A+ G G D+FR++ + + PG Sbjct: 87 FEATVFGIGGEIVASAQGGDTD--GRRDVFRKVVPLIQQTPGGEYPVGRLEVAFHDGKVR 144 Query: 120 -RLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNG 178 LV Q S + + ++ + L+ L + R + + Sbjct: 145 SELVRQRAGAAIVLSGAFLLVTAVLLAAVRHLVTGPLTRLRNSLHHNASVLMREPLVWSS 204 Query: 179 ERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFF 238 A + LL EI E I A +D+ TGL NR Sbjct: 205 RDE----------LGEVVHAYNQLLTEIDQRTED-------IHQLANRDLLTGLPNRRLL 247 Query: 239 DNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPG 298 ++++ + + ++ + +F +++DT GH Q + + + + M Sbjct: 248 EDRIGHAIALAGRQNRSIALLFADIDNFKVVNDTLGHKQGDALLRIIADRIHDIMRGM-- 305 Query: 299 ALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-S 356 +AR+ +F ++ + EA S+A +LI+ + + +GI + Sbjct: 306 DTVARWGGDEFVIVVESLNSAGEAASVAEKLIETIGVPVQLGSNLLRVGVSVGISMYPQD 365 Query: 357 GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQ 416 G D ++++A+ A A +G N++ +D ++ + + + Q + + L+ Sbjct: 366 GADITTLIKNADMALFEAKGRGRNTFHFFDQAMNARALRRMDIEMALRQAIPQNQLELHY 425 Query: 417 KPAV-TREGQVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRY 474 +P + + G + E + R V E++P+ + L ++ +R Sbjct: 426 QPKIASASGALAGVEALVRWRRPGEGLVQPDEFIPLAEESDLIVAVGEWVLNEACRQIRD 485 Query: 475 WPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRL 529 W +A+ ++ + + + + Q + I +E+ E+ ++ Sbjct: 486 WEARGFGEVAVAVNLSPRHFLHEKDVDGIFRIVDQ-SGVRPDLIEVEVTESTFMHEPEKV 544 Query: 530 QPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSL 589 + + G +A++ G S S+++ L + LK+ V +IE +N +++++ Sbjct: 545 IGYLNRLRDRGFGIAIDDFGSGYSSLSYLRRLPITTLKIDRAFVMDIEHNADNAEIIRAI 604 Query: 590 VEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 + + + A GV +R +++ L QG +F+ P + ++ Sbjct: 605 IAMANAMGLGLIAEGVENRHQFEFLRHADCGVVQGYYFSRPLPPADLEAQLVRQ 658 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 85/456 (18%), Positives = 176/456 (38%), Gaps = 16/456 (3%) Query: 199 LDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIV 258 + +++ RE + IR A D TGL NR + + +L + V Sbjct: 642 IRGTAQDVTALRE----AEARIRYLARFDPLTGLLNRSAWQDHAQDVLRHAARHDDRCAV 697 Query: 259 MMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRT- 317 + + L DF ++D+ GH+ + + L + L+AR +F LL Sbjct: 698 LFLDLDDFKTVNDSLGHAAGDRLLAQVACRLGGCVRAE--DLVARIGGDEFVILLSRLAH 755 Query: 318 LKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGL 376 +E +A +++ A+ IGI + G + + +++HA++A A Sbjct: 756 AEEPARVAERVLDALARPLQIDSQPLRVGASIGIALYPADGGEIDTLLKHADTAMYEAKE 815 Query: 377 QGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRI 435 G N++ + + ++ ++ + + + G RL+ +P + G+V+ E + R Sbjct: 816 SGRNAYRFFLPEMTQRVTRRLQTEAELRKAIESGDLRLHYQPQIDAASGRVYGCEALVRW 875 Query: 436 FDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESL 489 + ++P Q GL + W + L A+ ++ Sbjct: 876 QHPERGLLPPDRFVPFAEQSGLIVPLGEWVLREACLQQVRWRDAGLPPLDVAVNISALQF 935 Query: 490 IRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAG 549 R F + L + + RI +E+ E+ + L + ALG+ +A++ G Sbjct: 936 RRRDFVATVARVLGET-GADPARIELEITESALMDATPELVASFDQLVALGLTLALDDFG 994 Query: 550 LTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRS 609 S S++K L + LK+ V + E+ + + + +V A GV + Sbjct: 995 TGYSSLSYLKRLPLRRLKIDRSFVDGLPDNPEDAAITSATLSLARDLGMEVVAEGVETED 1054 Query: 610 EWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYS 645 + L +RG QG F+ ++ + ++ + Sbjct: 1055 QRGYLCKRGCRAMQGYLFSRPLGVEEFGTWFEEQAA 1090 >UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n=2 Tax=Proteobacteria RepID=Q2W1Z2_MAGSA Length = 1510 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 102/495 (20%), Positives = 193/495 (38%), Gaps = 15/495 (3%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F W G E R + + + +I + Sbjct: 1008 FYDAMWRSLIEQGCWQGEIFNRRKNGEIYPEWLTVNSVRDENGSVVNYVAIFSDISAIKS 1067 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 R I A D TG+ NR ++L + ++ T V+ I L +F +++D Sbjct: 1068 SQRR----IEFLATHDELTGIPNRSLLMDRLKHAVAQAKRQKTKLAVLFIDLDNFKVIND 1123 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKA 331 + GH ++ T L + LAR +F A+L +L++ S+A +++ Sbjct: 1124 SLGHDVGDQLLKQATERLKHCVR--DSDTLARLGGDEFVAVLTDVSLEKVNSVAARIVDF 1181 Query: 332 VDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLP 390 + + IGI + GQD+ +++HA++A A +G N + + D + Sbjct: 1182 LGASFSINDKSLFVSASIGISVFPDDGQDSLTLLKHADTAMYRAKERGRNQYQFFADEMK 1241 Query: 391 EKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDGN-EEVSSAEYM 448 + T + L R+ +P V G+V E + R D EVS A ++ Sbjct: 1242 VIALQRLTLETGLRLALETKSFRMCYQPQVDIHTGEVVGAEALLRWRDPTLGEVSPAHFI 1301 Query: 449 PMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLM 503 P+ GL + ++ + YW E+ L AI V+ L F + L Sbjct: 1302 PIAESCGLIGAIGETVFTMVLEQIAYWREKGLTVPRIAINVSAHQLRDAGFAAKVGSWL- 1360 Query: 504 QCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNV 563 + I IEL E+ + + I ++ ++ + +G++V+++ G S S++K+L + Sbjct: 1361 DSSGISSELIGIELTESALMERIDMVKEMLTSFDGMGMKVSIDDFGTGYSSLSYLKKLPI 1420 Query: 564 ELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQ 623 LK+ V I +++ + +++++ +V A GV S + L + G Q Sbjct: 1421 HELKIDRSFVDGIALERDDRSIAKAIIDMSRALGMRVVAEGVESEEQLGVLKEEGCDMVQ 1480 Query: 624 GDFFASSQPLDTNVK 638 G F + K Sbjct: 1481 GYLFHRPLSPEAFAK 1495 >UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KEH4_CYAP7 Length = 1027 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 84/481 (17%), Positives = 182/481 (37%), Gaps = 11/481 (2%) Query: 169 ETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDV 228 E + G + P + + T I+ + D ++ A D Sbjct: 543 EWHGEFHNQKKNGELFWESASISPIKNEEGVITHFIAIKEDITRRKAQDRILAYQANYDA 602 Query: 229 KTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNL 288 TGL NR ++L + E+ VM I L F ++DT GH + + Sbjct: 603 LTGLPNRFLAIDRLKLAILQAERQEQRVAVMFIDLDRFKNVNDTLGHEYGDLLLKQVAER 662 Query: 289 LSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMI 347 L + + +AR +F ++P+ + IA +++ +++ N + Sbjct: 663 LKKCLRK--SDTVARLGGDEFLIIIPNLKQPSHCKGIAKKILSSLEKPFNLLEEEAFISA 720 Query: 348 HIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQM 406 IGI + G D +M +A++A G N + Y + E R + L+ Q Sbjct: 721 SIGITLYPDDGDDVNALMRNADTAMYLGKRGGRNDFKFYTLGMNETNRTRIIIENLLHQA 780 Query: 407 LSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQ 464 L + L +P + +V E + R + +VS +++P+ + GL + Sbjct: 781 LKKKEIYLVYQPIMELKTEKVIGAEALLRWNNPQLGQVSPDQFIPIAEETGLINQLGAWV 840 Query: 465 ISRLIPLLRYWPEEN----LAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEA 520 IS+ + W + +A+ ++ + + + D + + +E+ E Sbjct: 841 ISQACQEVVQWKAQGTPISVAVNLSPRQFRDSKLLKIITDAIA-VNGITNHDLELEITEK 899 Query: 521 DVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRT 580 + + Q ++ ++ + ++++ G + S++ + LK+ + ++ Sbjct: 900 LLLEDSPGSQGILSQLHQMNFPLSIDDFGTGYSALSYLIKFPFNRLKIDRSFITDMTHSQ 959 Query: 581 ENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 + LV++++ G + QV A GV + + +L +G QG FF+ + Sbjct: 960 KAMGLVKTIIAMSHGLNLQVIAEGVETSEQLNSLKSQGCDYAQGYFFSRPLTGEEFRYYL 1019 Query: 641 S 641 Sbjct: 1020 Q 1020 >UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHU8_9GAMM Length = 892 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 96/502 (19%), Positives = 182/502 (36%), Gaps = 21/502 (4%) Query: 152 FLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNARE 211 F E R ++ T + + +I Sbjct: 388 FYQTMMESLSKNNYWQGEVWNQRKSGEIYPQHLTITAVQTSAGEITNYVGAFTDIT---- 443 Query: 212 QHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSD 271 Q + + I A D TGL NR +L + L G V I L +F L+D Sbjct: 444 QRKQDEADIHQLAFYDSLTGLPNRRSLQERLDSALSSCRHTRQLGAVFFIDLDNFKNLND 503 Query: 272 TWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAG----- 326 T GH Q ++ + N L++ + ++AR +F +L + + E+ +A Sbjct: 504 TAGHDQGDKLLVEVANRLNSCVRN--ADMVARLGGDEFIVILENLGVDESNVLAQVKDIV 561 Query: 327 -QLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIY 385 ++I + IGI + +++VM+ ++ A A G N++ + Sbjct: 562 AKVILTIQAPLTIGTQAYHPTCSIGIALFSEKDFSDEVMKRSDMAMYQAKSSGKNTYRFF 621 Query: 386 DDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDG-NEEVSS 444 D E R + LS L+ +P R + E + R VS Sbjct: 622 DPVAEEALCSLARMDADLRFALSNQQLELHYQPQY-RCQTLIGAEALLRWKHPDRGMVSP 680 Query: 445 AEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEEN------LAIQVTVESLIRPRFQRWL 498 AE++P+ GL I + L+ W E +A+ V+ + F + Sbjct: 681 AEFIPLAEDTGLILPIGEWVIRQACKQLQQWQERPETAELFIAVNVSARQFCQDNFVESV 740 Query: 499 RDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWI 558 R L+ +++ +EL E+ V + ++ + + G+R A++ G S S + Sbjct: 741 RQ-LLNTYGVSAEKLKLELTESLVLMDVEDTIQKMQALRSYGIRFALDDFGTGYSSLSHL 799 Query: 559 KELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRG 618 K L ++ +K+ +R++ + ++ +VQ+++ V A GV + + L + Sbjct: 800 KRLPLDQIKIDRSFIRDVPEDQDDSEIVQAIIAMGQNLGLNVLAEGVETDEQLAFLTELD 859 Query: 619 VTGGQGDFFASSQPLDTNVKKY 640 QG +D Y Sbjct: 860 CLDIQGFLLGRPSSIDKFETTY 881 >UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SP12_9RHIZ Length = 894 Score = 670 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 97/622 (15%), Positives = 215/622 (34%), Gaps = 28/622 (4%) Query: 42 VQAVATAIDTHLVSNDFSVLRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSS 101 + +A I + + +I E++ + L ++ L + +GS Sbjct: 279 LVGIAHDITGRKREDMLRTGQAEILEMIATG----APLDDVLDRLMRLMESQLTGILGSV 334 Query: 102 DLFRELSVPLIKHPGMSLRLVYQDPMGNYFHS----LMTTAPLTGAIGFIIVMLFLAVRW 157 L + L SL Y + + TA + ++ + Sbjct: 335 LLLDKEGRHLRHGAAPSLAEGYINAIDGVAIGPKVGSCGTAVFRREPVVVADIMRDPLWD 394 Query: 158 LQRQLAGQELLETRATRILNGERGSNVLGTI-----YEWPPRTSSALDTLLREIQNAREQ 212 R LA + + + + +G+ + P + L I + Sbjct: 395 DYRDLAERYGYRSCWSTPIVSHQGAVLGVFAMYSMTVREPAEAETRLINFTTRIAGIAIE 454 Query: 213 HSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDT 272 + + I A DV TGL NR ++L+ + ++ V+ I L +F +++DT Sbjct: 455 RKKAEDQIHFMANHDVLTGLPNRALLQDRLSQAILHAQRYDRWVSVVFIDLDNFKLINDT 514 Query: 273 WGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIA---GQLI 329 GH+ + T+ + + + R +F +L + K + IA +L Sbjct: 515 LGHNAGDRLLKTVAERMVGCI--SSTDTIVRLGGDEFVLVLSDQ-PKNVDLIAETLQKLR 571 Query: 330 KAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDS 388 A+ IGI + G+ E ++ +A++A A G +++ Y Sbjct: 572 TAIAEPLQLGDHCVRATASIGIATYPKDGKAPESLVANADAAMYRAKAVGRDNFQFYAPE 631 Query: 389 LPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG-NEEVSSAE 446 + + + L+R L+ +P + R Q+ E + R + ++ Sbjct: 632 FNTRAHERFLLQEELRTALARSQFELFYQPQIDLRSVQIVAVEALIRWNHPAHGAMAPVG 691 Query: 447 YMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDT 501 ++P + GL + + W + L ++ V+ + Sbjct: 692 FIPTAEETGLIVPIGDWVLHEACRQNKAWQDLGLEPITVSVNVSARQFSEKNLVERVVHA 751 Query: 502 LMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKEL 561 L + + + +EL E+ + Q + + + +LGV+++++ G S S +K Sbjct: 752 LSE-SDLEGCYLELELTESLIMQDVGLAVTTMNKLQSLGVQISIDDFGTGYSSLSALKTF 810 Query: 562 NVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTG 621 + LK+ + ++ ++Q + +++ +V A GV + + L + Sbjct: 811 PIARLKIDKSFIDDVATNEDDQAVASAVISLGQKLKMRVIAEGVETDEQVAFLRKNNCDE 870 Query: 622 GQGDFFASSQPLDTNVKKYSQR 643 QG F+ + R Sbjct: 871 MQGYHFSKPVCSREIERLLESR 892 >UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUR6_PELPD Length = 729 Score = 670 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 89/456 (19%), Positives = 181/456 (39%), Gaps = 16/456 (3%) Query: 199 LDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIV 258 + TL +I R + + I+ A D T L NR+ F ++L + + V Sbjct: 281 VATLFEDITERR----KSEQQIQHMAYFDSLTDLPNRVLFLDRLRQAIAHALRDENSLAV 336 Query: 259 MMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTL 318 + + L F ++DT GHS ++ +T L + LAR +F ++ Sbjct: 337 LFLDLDRFKDINDTLGHSAGDQLLIQVTRRLGRQIR--SCDTLARLGGDEFVVIVTDLGK 394 Query: 319 K-EAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGL 376 K A +A LI A+ + IGI + G + E +++HA+ A ++ Sbjct: 395 KMNATRVAQDLINAIQPPFLIAGRELHVTTSIGIALFPDDGNNAETLVKHADLAMYSSKE 454 Query: 377 QGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRI 435 G N + Y S+ +K + + L R + +P + + V E + R Sbjct: 455 SGRNRYNFYSASMNQKALMRMETEAGLRNALERREFYVEFQPIMNAADSTVVAAEALVRW 514 Query: 436 FDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESL 489 + +++ + + GL + + ++ W + L ++ V+ + Sbjct: 515 NHPTRGRIPPDQFIDLAEETGLVVPLGEWVLRTVCSRIKTWSDAGLPLIRFSVNVSSRQI 574 Query: 490 IRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAG 549 R F +R+ L + + ++ IEL E+ + +H + + GV A++ G Sbjct: 575 ERQDFAEIVRNALRE-SGANSAQLEIELTESCLIRHSDTNISDLFGLKEWGVSFAIDDFG 633 Query: 550 LTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRS 609 S +IK L ++ +K+ VR+I +Q +V++++ + A GV + Sbjct: 634 TGYSSLGYIKTLPIDHIKIDRSFVRDISTDFHDQAIVEAIIAMSQRLGIRNIAEGVETIE 693 Query: 610 EWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYS 645 + + L +RG QG +F + + + + Sbjct: 694 QVRFLQERGCEEIQGYYFHRPLSAEALEELLRAQEN 729 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 670 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 105/539 (19%), Positives = 201/539 (37%), Gaps = 26/539 (4%) Query: 122 VYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVR-------WLQRQLAGQELLETR-AT 173 ++ N S +T + A+G + +L +A + +LA QE E Sbjct: 447 SHRIVRINRAFSRITGYQESEAVGQSVRLLTMAEAGPDCNADAVYARLARQERWEGESWG 506 Query: 174 RILNGERGSNVLGTIYEWPPRTSS---ALDTLLREIQNAREQHSRLDTLIRSYAAQDVKT 230 R +G L + TL R+I RE R I+ A D T Sbjct: 507 RRKDGSGYPQWLSVSSVRDGDANGPITHSITLFRDISLQREAQER----IQRLAHFDPLT 562 Query: 231 GLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLS 290 L NR+ + + ++ G ++ + L F ++D+ GH + + L Sbjct: 563 DLPNRVLLAERTQRQIAQEQARGGQLALLFLDLDHFKNVNDSLGHRIGDILLVAVARRLQ 622 Query: 291 TFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIG 350 + + P ++R +F LLP + A +A L+ AV + + +G Sbjct: 623 SLIG--PQDTVSRLGGDEFLLLLPATSAAHAAKVASALLTAVAQPFQIDPYELSTTLSVG 680 Query: 351 ICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSR 409 I G+ + + + A++A +A G N + + L + ++ + + L R Sbjct: 681 IAMCPADGESFDTLYQRADAAMYSAKQSGRNRYGFFTADLQARTARALQIENALRRALER 740 Query: 410 GGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISR 467 L+ +P V+ GQV E + R V+ AE++P+ G + Sbjct: 741 QQFELHYQPQVSLGTGQVVGAEALLRWHHPELGVVAPAEFIPVAENSGQIVALGEWVLHT 800 Query: 468 LIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADV 522 + W + L ++ ++ P+ + L Q +R+ +EL E Sbjct: 801 AARDAKRWLDMQLPLRAVSVNLSAVQFRHPQLPEMVTRCLQQA-GLPARRLELELTEGAA 859 Query: 523 GQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTEN 582 ++ ++ GVR++++ G S S +K + LK+ VR+++ + Sbjct: 860 VDDPVAALAMMDQLHDRGVRLSMDDFGTGYSSLSCLKRFQIYKLKIDQSFVRDLDDDAND 919 Query: 583 QLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYS 641 + +V +++ Q A GV + + Q L +G GQG F+ P D Sbjct: 920 RAIVSAIIRMAQALGMQTTAEGVETDGQLQFLRAQGCDEGQGYLFSRPLPADAFEAYLR 978 >UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=C6XEG9_METSD Length = 718 Score = 670 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 79/486 (16%), Positives = 179/486 (36%), Gaps = 16/486 (3%) Query: 167 LLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQ 226 E++ R + + + +I + + LI A Sbjct: 236 NFESQIYRRDGSTIWISENARAVRNDAGKLLYFEGTVEDITERKS----YNALIEYQATH 291 Query: 227 DVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLT 286 D TGL NR ++L + ++ + V+ + L F ++D+ GH ++ + Sbjct: 292 DDLTGLPNRTLMQDRLLQAISYADRTASKLAVVFVDLDKFKDINDSMGHFIGDQLLIAMA 351 Query: 287 NLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEA-ESIAGQLIKAVDTLPNNKMLDRDD 345 L + + +AR +F LL + +A +++ + + D Sbjct: 352 RRLESCIR--DSDTVARPGGDEFVLLLSNIHGMDALSQTLQRVLALTSEPCSIEGKDFTV 409 Query: 346 MIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIE 404 IGI + G+ +E ++++A++A A +G N++ Y L + + Sbjct: 410 TSSIGISLYPDDGKTSETLLKNADTAMYKAKQEGKNNFQFYTRELNSILVERLEMEYQMR 469 Query: 405 QMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDR 462 L L+ +P + R ++ E + R + +S ++P+ + L E+ Sbjct: 470 NALGHNEFHLHYQPKLNLRTQRITGVEALIRWHNPRQGLISPNRFIPIAEESSLIEQIGS 529 Query: 463 LQISRLIPLLRYWP-----EENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIEL 517 + + + +++ V+ + + L + + + +E+ Sbjct: 530 WVLEKACMESIALSQLSGYDVPVSVNVSPRQFQQSNLVGNISRVLQET-GLKPSLLELEI 588 Query: 518 AEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIE 577 E + + V+ + LG+++A++ G S ++K ++ LK+ V +E Sbjct: 589 TEGTLADTSPQFIKVLNDLKGLGIKLAIDDFGTGYSSLGYLKHFPIDNLKIDRSFVMGLE 648 Query: 578 KRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNV 637 T NQ +++++V + A GV + + L+ G QG F+ P D Sbjct: 649 SDTANQAILKAIVALGHNLGINLVAEGVETERQRDFLLSIGCDEMQGFLFSQPLPFDQAG 708 Query: 638 KKYSQR 643 K + Sbjct: 709 KLLLAQ 714 >UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=C6D7W4_PAESJ Length = 1095 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 86/460 (18%), Positives = 181/460 (39%), Gaps = 18/460 (3%) Query: 194 RTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVG 253 + S A+ + ++ R + L A D T L NR F+ L LE + Sbjct: 482 QGSPAVIGTILDVTE----RKRAEELNAFLAYHDSLTELPNRRKFEEMLENALETAKTAR 537 Query: 254 THGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALL 313 H VM + + F ++D+ GH+ ++ + L + AR +F +L Sbjct: 538 RHFAVMYLDMDRFKYINDSLGHAVGDQLLIAFSKRLQEQIRET--DFAARMGGDEFTVIL 595 Query: 314 PHR-TLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESAT 371 PH A +A ++I+ + + IGI + G D+ +M++A+SA Sbjct: 596 PHIRDNNSAIEVARRIIERTREPFYIEDYELFITTSIGISIYPNDGDDSSTLMKNADSAL 655 Query: 372 RNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRE 430 A G N + I+ S+ + + + + R +Y +P V G++ E Sbjct: 656 FRAKDLGKNGYQIFTSSMNVQTYKVFTLEKDLRKAIQRDELEMYYQPKVNIHTGEIVGAE 715 Query: 431 LMCRIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQV 484 + R VS E++P+ + GL + + W L +I V Sbjct: 716 ALIRWNHPEWGLVSPNEFIPISEETGLILSLGNWVKRTVCRQNKEWQLAGLKPIPISINV 775 Query: 485 TVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVA 544 T + + F ++ L + + + IE+ E+ + ++ + + +N LGV ++ Sbjct: 776 TAKRFLSKDFMDAIQQILAET-GLEPHYLEIEITESSLLENAETVMHTLDSLNKLGVTIS 834 Query: 545 VNQAGLTLVSTSWIKELN--VELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYA 602 ++ G S S++K + +LK+ + ++ + +++ ++ ++++ + V A Sbjct: 835 LDDFGTGYSSLSYLKRFKHTINILKIDRSFIHDLHQGSDDNAIISAIIQLAQHMNMSVVA 894 Query: 603 TGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQ 642 GV + + L QG F+ + + + Sbjct: 895 EGVETGEQLHILKLLKCDLVQGYLFSRPVQAEAFAQLLKR 934 >UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Caulobacteraceae RepID=B8H3B9_CAUCN Length = 748 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 94/509 (18%), Positives = 195/509 (38%), Gaps = 10/509 (1%) Query: 139 PLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILN--GERGSNVLGTIYEWPPRTS 196 + G I LA + +R A + E R + + G + + + Sbjct: 192 EVIGKTDADIHDAELAALYRERDRAVLDSGEVRVIEEDHVPRKDGGMAILRTKKIALLNA 251 Query: 197 SALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHG 256 L + + R + I A D T L NR+ F L L + + G Sbjct: 252 EGRAEYLLGVSEDIAERKRAEAQIARLAHYDPLTDLPNRVLFQKSLGEALARRSRKGDAL 311 Query: 257 IVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR 316 V + L F ++DT GH + L + G +AR +FA + Sbjct: 312 AVHFVDLDRFKTVNDTLGHPLGDALLKIAAERLRGCVRE--GDTVARLGGDEFAIVQTGL 369 Query: 317 TLKE-AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNA 374 A +A ++++A+ + + +G+ G D +++++ A+ A A Sbjct: 370 DDSNGATRLAARIVEAMAAPFDLQGHHVVIGASVGVSLAPTDGDDADELLKKADMALYRA 429 Query: 375 GLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMC 433 G ++ ++ ++ E+ + + + L G L+ +P + +V E + Sbjct: 430 KADGRGAYHFFERAMDEQLQARRALELDLRRALQAGEFELFYQPLYHLGDERVTGCEALL 489 Query: 434 RIFDGN-EEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEE-NLAIQVTVESLIR 491 R VS A+++P+ + GL + + R WPE LA+ ++ Sbjct: 490 RWRHPERGMVSPADFIPLAEEIGLIVQLGEWVLRRACAEAANWPEHVRLAVNLSPAQFRD 549 Query: 492 PRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLT 551 R + L +R+ +E+ E+ + Q ++ + ALGVR++++ G Sbjct: 550 RGLVRTVVSALA-ASGLPAQRLELEITESVLLQDSQANMTMLHDLKALGVRISMDDFGTG 608 Query: 552 LVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEW 611 S S+++ + +K+ VR+I ++ +++++++ + A GV ++++ Sbjct: 609 YSSLSYLRSFPFDKIKIDQTFVRDILHDSDAMAIIKAVLDLGASMGVVTTAEGVETQAQL 668 Query: 612 QTLIQRGVTGGQGDFFASSQPLDTNVKKY 640 L Q+G QG F + P K Sbjct: 669 DALRQQGCAEIQGYFISRPAPASEIAKML 697 >UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q609J7_METCA Length = 712 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 99/496 (19%), Positives = 198/496 (39%), Gaps = 19/496 (3%) Query: 157 WLQRQLAGQ-ELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSR 215 L L G+ +E R V + +E R + R+I RE Sbjct: 221 LLGHMLRGKTGTIELSLVRADGTTVPVEVSSSTFEMDGR--RYVHGAFRDITQRRE---- 274 Query: 216 LDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGH 275 + I+ A D T L NR+F +L +E + VM I L +F ++DT GH Sbjct: 275 AEDRIKHLAHHDPLTNLPNRVFLHGRLEQAIELARREQNQVAVMFIDLDNFKRINDTLGH 334 Query: 276 SQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLP-HRTLKEAESIAGQLIKAVDT 334 + + L+ + ++ R +F ++ +R + ++A ++++++ Sbjct: 335 RIGDALLEQVAARLTENV--PGSQVVGRLGGDEFIVVITGNRVSTTSAAMAERILESLCR 392 Query: 335 LPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKG 393 + IGI + G E +M+HA++A +A +G N++ + ++ Sbjct: 393 PYTVEDYQLHSGASIGIAIYPADGNSAETLMKHADAAMYHAKSRGRNTFEFFSQAINRGV 452 Query: 394 RGNVRWRTLIEQMLSRGGPRLYQKPAVTRE-GQVHHRELMCRIFDGN-EEVSSAEYMPMV 451 R + + L GG +L+ +P + G + E + R ++ ++P+ Sbjct: 453 RERLDIENGLRDALKHGGFKLHYQPQIDLTTGSICSVEALLRWRHPLLGVIAPDRFIPIA 512 Query: 452 LQFGLSEEYDRLQISRLIPLLRYWPEEN-----LAIQVTVESLIRPRFQRWLRDTLMQCE 506 + L I R LR W + +A+ V+V+ L F L + + Sbjct: 513 EETKLILPLGLWVIDRACHQLRAWRNDGIAGVRMAVNVSVKQLQDESFFEALGSIV-ERH 571 Query: 507 KSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELL 566 I +E+ E+ + +++SR+Q +++ + G+ ++++ G S +K L ++ L Sbjct: 572 GLSGSDIELEITESAIMENLSRVQALLKSLQDYGITLSIDDFGTGYSSLGRLKLLPIQSL 631 Query: 567 KLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDF 626 K+ V +IE N + ++ ++ A GV + ++ L G QG Sbjct: 632 KIDRSFVHDIETDHGNAKICDGIIALGHSLGLKIIAEGVETDAQKNLLQNSGCDAIQGFL 691 Query: 627 FASSQPLDTNVKKYSQ 642 A P D K +Q Sbjct: 692 IAKPLPADDVAKLITQ 707 >UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K569_AZOSB Length = 947 Score = 669 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 86/488 (17%), Positives = 191/488 (39%), Gaps = 16/488 (3%) Query: 163 AGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRS 222 G E R + + + ++ L ++ H + + L+R Sbjct: 453 QGAWSGEVTVRREDGPTLPAQLSVSAVLNSAGGATHYVGALTDMS----AHKQTEALLRH 508 Query: 223 YAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQF 282 A D T L NR ++ ++ + ++ I L F ++D+ GHS + Sbjct: 509 MAEYDALTDLPNRSLLHDRARAAIQGAARTDRLAALLFIDLDRFKNVNDSLGHSVGDALL 568 Query: 283 FTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKE-AESIAGQLIKAVDTLPNNKML 341 L++ + + G +AR +F LL T + A + A Q+I A T + Sbjct: 569 RQAAKRLASLL--HGGDTIARPGGDEFVMLLAEITDRAVAANRAAQIIDAFSTPFRVEHY 626 Query: 342 DRDDMIHIGICAWRS-GQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWR 400 + IGI G D + ++ +A++A +A G N++ + D + + R + Sbjct: 627 ELSVTPSIGIAIAPDDGVDADTLLRNADAAMYHAKESGRNTYRFFTDEMSLRVRERLELE 686 Query: 401 TLIEQMLSRGGPRLYQKPAVTR-EGQVHHRELMCRIFDGN-EEVSSAEYMPMVLQFGLSE 458 L+ Q +SR ++ +P + ++ E + R ++ ++P+ GL Sbjct: 687 NLLRQAMSRDEFEVFYQPQFGLSDHRILGCEALVRWRHPERGLIAPERFIPLAEDTGLIV 746 Query: 459 EYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRI 513 R + + W L A+ + + F + + L + + + Sbjct: 747 AIGRRVLETACHTAQGWRAAGLGDIPVAVNASPVQIHHGNFAETVAEVLAET-GLPARLL 805 Query: 514 IIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLV 573 IEL E+ + + + + + +GVR+A++ G S +++K ++ LK+ + Sbjct: 806 EIELTESTLMADAAPVAATLAALQDMGVRLAIDDFGTGYSSLAYLKRFQLDKLKIDRSFI 865 Query: 574 RNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPL 633 ++ ++ + +++ V A GV + ++ + L+ +G GQG F+ P+ Sbjct: 866 NDLPGDPDDANITVAIIGIARSLGMSVIAEGVETAAQERFLVDQGCAEGQGYLFSPPVPV 925 Query: 634 DTNVKKYS 641 ++ + Sbjct: 926 ESMTALLA 933 >UniRef50_B6BGZ6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGZ6_9PROT Length = 595 Score = 669 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 84/498 (16%), Positives = 203/498 (40%), Gaps = 22/498 (4%) Query: 164 GQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLD------ 217 G+ + + V + + R+I N ++ L+ Sbjct: 96 GEAMKFEEYGNVKGELLYLEVYKAPFYDEDGKTIGTVGAGRDITNLKKTQLDLEKNLKIL 155 Query: 218 ----TLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTW 273 + A D T L NR+ F ++L + ++ ++ I L F ++D+ Sbjct: 156 DEQREQLEYQANHDSLTDLPNRVLFMDRLQQSINIAQRYDNKVALLFIDLDHFKEINDSL 215 Query: 274 GHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHR-TLKEAESIAGQLIKAV 332 GH ++ ++ + M + L+R +F +L +++ I ++A+ Sbjct: 216 GHGVGDKVLIEVSRRMKNQMRK--SDTLSRLGGDEFCIILNDIIDIEDMSDIITSGMEAL 273 Query: 333 DTLPNNKMLDRDDMIHIGICAWR-SGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPE 391 + IG+ + G ++++A++A A G N++ YD+++ E Sbjct: 274 KEPMEINGHTLYVGMSIGVSVYPNDGNSASSLLKNADAAMYKAKGDGRNTYCFYDEAMTE 333 Query: 392 KGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHRELMCRIFDG-NEEVSSAEYMP 449 + V T + + L +Y +P + RE ++ E + R + +++P Sbjct: 334 RAFERVFLETALRKALEEDELVVYFQPQIDARENKLVGMEALVRWEHPIMGFIYPDKFIP 393 Query: 450 MVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQVTVESLIRPRFQRWLRDTLMQ 504 + G+ + DRL + + + + W + L A+ + ++ + F ++ + L Sbjct: 394 LAEITGMIVQLDRLVMKKALTQFKKWDKAGLNPGKLALNLAIKQIEENDFIEFIENIL-D 452 Query: 505 CEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVE 564 CE K I EL E + + ++ ++ LG+ +A++ G S +++K L ++ Sbjct: 453 CEDCSYKNIEFELTENQIMNNPEASIETLQKLSDLGISIAIDDFGTGYSSLAYLKRLPID 512 Query: 565 LLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG 624 LK+ ++++ + ++ + ++++ CS + +V A GV + + ++Q G QG Sbjct: 513 KLKIDRSFIKDLPQDADDAAITKTIISLCSSLNLKVIAEGVETEKQKNFILQNGCQFIQG 572 Query: 625 DFFASSQPLDTNVKKYSQ 642 +++ ++ K + Sbjct: 573 YYYSRPLSIEDMTKYLIE 590 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 109/593 (18%), Positives = 208/593 (35%), Gaps = 26/593 (4%) Query: 68 LMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLRLVYQDPM 127 L + VD+ + LA +Y LF + + Sbjct: 247 LPAYYEGTVVDITDRKRAEAALATQRAYFT----QLFANSPQAIALIDMHRNIVDANKAF 302 Query: 128 GNYFHSLMTTAPLTGAIGFIIVMLFLAV--RWLQRQLAGQELLETRATRILNGERGSNVL 185 F G FI+ L+ LAG+ ++ R +G + Sbjct: 303 EALFGYRTADIQGFGMRAFIVPEHLLSECENMRCAVLAGKPVVRETVRRHCDGRLIPVSM 362 Query: 186 GTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATL 245 + + + ++I + + I A D TGL NR F ++L Sbjct: 363 IGFPIEIAGETQGIVYIYQDISERKA----FEEQITHQAFHDALTGLPNRSLFADRLERA 418 Query: 246 LEDQEKVG-THGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARY 304 L + G + V+MI L F ++DT GH ++ + LS + +AR Sbjct: 419 LTRARRRGDSQYAVLMIDLNKFKGVNDTLGHQAGDQLLVEVARRLSGCVRSM--DTVARL 476 Query: 305 HRSDFAALLPH-RTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAW-RSGQDTEQ 362 +FA +L +T KE ++ ++ + IGI R + Sbjct: 477 GGDEFAVILEEFKTKKEVMTVVERIGVGLGKPFVLCGKTVTPEASIGIVLHTRDYAAADD 536 Query: 363 VMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT- 421 ++ A+ A A QG S I+D + ++ + T + Q L G L+ +P V Sbjct: 537 LLRDADIAMYRAKEQGRASM-IFDRKMHQEILEAISLETDLRQALEAGELLLHYQPIVDV 595 Query: 422 REGQVHHRELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWP---- 476 ++ ++ E + R V +++P+ + GL R I LR W Sbjct: 596 KDSRIVGFEALVRWDHPDRGLVPPGQFIPLAEETGLILPLGRFVIDEACRQLRAWQLEMP 655 Query: 477 ---EENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVI 533 + ++++ V+ ++ + L + +E+ E+ + + Sbjct: 656 EAADLSVSVNVSCRQFVKDGLVEHVAQVLAAT-GLPPACLKLEITESVLMHDAEHTAREL 714 Query: 534 RLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEAC 593 + ALGV++A++ G S S++++L ++ LK+ + E+Q +V+S++ Sbjct: 715 NRLKALGVKIAIDDFGTGYSSLSYLRQLPIDHLKIDRSFISGQGCDGESQEIVKSIISLA 774 Query: 594 SGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV 646 V A GV + L QG F+ + Q +V Sbjct: 775 RSLGLTVIAEGVECPDQLDRLRLADCDKAQGFMFSRPVEATAAGRLIRQHPAV 827 >UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magnetospirillum RepID=A4U4R0_9PROT Length = 840 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 102/521 (19%), Positives = 198/521 (38%), Gaps = 19/521 (3%) Query: 133 SLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWP 192 S G F++ R Q + E G + +V+ Sbjct: 324 SADLAHMSRGFGEFMLTGSLSDERAWQEKK--PVAYEKELPTPDGGAKVFDVIKIPLYEE 381 Query: 193 PRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKV 252 L + R++ + +R I A D TGL NR+ F +L T L +++ Sbjct: 382 DGARRGLVMVGRDVTERKLAAAR----IHHLAHHDSLTGLPNRVLFQERLRTALAQAKRL 437 Query: 253 GTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAAL 312 G +M + L F ++DT GH + + L + +AR +FA + Sbjct: 438 GHKVALMFLDLDKFKDINDTLGHHLGDLLLKAVAKRLLRCVRET--DTVARLGGDEFAVV 495 Query: 313 LPHRTLKE-AESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQ-DTEQVMEHAESA 370 L + E A ++A +I ++ + + IGI + D+E ++++A+ A Sbjct: 496 LTNLDDPEGASNVAESIIASISEPFGLDEHEVNTSTSIGITIFPDDAVDSEVLLKNADLA 555 Query: 371 TRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVT-REGQVHHR 429 + +G N++ Y + + + + L ++ +P + + G+V Sbjct: 556 MFRSKAEGRNNYHFYVAEMDAEIQARKVVEHDLRVALGTDQLEMHYQPLIEMKTGEVVGC 615 Query: 430 ELMCRIFDG-NEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL-----AIQ 483 E + R VS E++P+ + L R + R R W L A+ Sbjct: 616 EALIRWKHPTRGWVSPVEFIPIAERTDLIVPLGRWILHRSCLQGRDWARAGLPPQKIAVN 675 Query: 484 VTVESLI-RPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVR 542 ++ + D L Q ++ +E+ E Q++ V+R + +GV Sbjct: 676 LSPVQFKNHTALLAMIADILDQT-GFPPDQLQLEITEGIAMQNVEATVDVLRQLRDMGVL 734 Query: 543 VAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYA 602 ++++ G S +++K V+ LK+ V +I +N +V ++V T+V Sbjct: 735 ISIDDFGTGYSSLNYLKRFPVDKLKIDRSFVVDIGLHPDNAAVVNAIVTLGHSLGTRVNV 794 Query: 603 TGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQR 643 GV + + L GV QG +FA + P D + ++ Sbjct: 795 EGVETIEQLDFLKAHGVDEAQGFYFAKALPPDEFARFVREK 835 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.183 0.680 Lambda K H 0.267 0.0559 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,974,756,098 Number of Sequences: 3077464 Number of extensions: 342974504 Number of successful extensions: 845479 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 20353 Number of HSP's successfully gapped in prelim test: 3841 Number of HSP's that attempted gapping in prelim test: 733631 Number of HSP's gapped (non-prelim): 31103 length of query: 646 length of database: 1,040,396,356 effective HSP length: 135 effective length of query: 511 effective length of database: 624,938,716 effective search space: 319343683876 effective search space used: 319343683876 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 98 (41.9 bits)