116 c3cjpA_ Probab=98.52   E-value=2.2e-05  Score=51.86  Aligned_columns=231  Identities=13%

Q ss_pred             CCEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCC---------------------------HHHHHHHHHHHHHH
Q ss_conf             300504774335889898860697089985882168989---------------------------89999999999840
Q batch____        14 DDWHLHLRDGDMLKTVVPYTSEIYGRAIVMPNLAPPVTT---------------------------VEAAVAYRQRILDA   66 (348)
Q Consensus        14 iD~HvH~Reed~~tgt~aAaaGGvTtv~~MPNt~Ppi~t---------------------------~e~~~~~~~~~~~~   66 (348)
                      ||.|+|+- .....--......|+...+.++...++-.+                           .........+..+.
T Consensus         3 ID~H~Hl~-~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (262)
T c3cjpA_           3 IDGHTHVI-LPVEKHIKIMDEAGVDKTILFSTSIHPETAVNLRDVKKEMKKLNDVVNGKTNSMIDVRRNSIKELTNVIQA   81 (262)
T ss_dssp             EEEEEECC-SSHHHHHHHHHHHTCCEEEEECCSCCGGGCCSHHHHHHHHHHHHHHHTTSSTTCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEECC-CCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCHHCCCEEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf             89985026-97899999999769956998358788578310899998422203551663065322213678999999763


Q ss_pred             CCCCEEEEEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCC
Q ss_conf             78724577378999668888788885573477104764144222468877579999999999999749869994168521
Q batch____        67 VPAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAAKLYPANATTNSSHGVTSIDAIMPVLERMEKIGMPLLVHGEVTHA  146 (348)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~K~f~~~~~~~s~~gv~d~~~l~~~l~~~~~~g~~v~vHaEd~~~  146 (348)
                      ......................++.+.....++.+++.+....        .+...+.+.++.+++.+.++.+|.-....
T Consensus        82 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gi~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~h~~~~~  153 (262)
T c3cjpA_          82 YPSRYVGFGNVPVGLSENDTNSYIEENIVNNKLVGIGELTPAS--------GQIKSLKPIFKYSMDSGSLPIWIHAFNPL  153 (262)
T ss_dssp             STTTEEEEECCCTTCCHHHHHHHHHHHTTTTTCSEEEEECCCT--------TCGGGGHHHHHHHHHTTCCCEEECCSTTC
T ss_pred             HCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCC--------CCCHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             0275002202125788068999999971248750898458876--------78853899999999649955999268877


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH--HHCCCCEEEEEEHHHHEECHHHHCCCCCCCCEEEEC
Q ss_conf             028024689999999999985428982999925999999999--967995699973256300688851678985169838
Q batch____       147 DIDIFDREARFIESVMEPLRQRLTALKVVFEHITTKDAADYV--RDGNERLAATITPQHLMFNRNHMLVGGVRPHLYCLP  224 (348)
Q Consensus       147 ~~~~~~~E~~~~~~~~~~~~~~~~~~~i~i~HiSt~~sie~i--k~~g~~Vt~EvtpHhL~l~~~d~~~~~~~~~~k~~P  224 (348)
                      .        .........++.+++++++++.|+....--+..  .....+++.+++-.                      
T Consensus       154 ~--------~~~~~~~~~~~~~~P~~~~i~~H~g~~~~~~~~~~l~~~~n~y~d~s~~----------------------  203 (262)
T c3cjpA_         154 V--------LQDIKEIAELCKAFPKVPVILGHMGGSNWMTAVELAKEIQNLYLDTSAY----------------------  203 (262)
T ss_dssp             C--------HHHHHHHHHHHHHSTTSCEEEGGGGGGGHHHHHHHHHHCTTEEEECTTC----------------------
T ss_pred             C--------CCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEECCCC----------------------
T ss_conf             7--------5898999999996899858996288778899999996045561701226----------------------


Q ss_pred             CCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHC
Q ss_conf             99899999999999862996399802877789667166568888368899999999997318999999999700537861
Q batch____       225 ILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYATVFEEMNALQHFEAFCSVNGPQFY  304 (348)
Q Consensus       225 PlR~~~dr~aL~~~l~~G~id~~IaTDHAPh~~eeK~~~~~~~Gi~g~e~~lpll~~~~~~~~~l~~~v~~~s~NPAki~  304 (348)
                         ....-..+++..-...|  ..|||- ||              ...+..+-.+...   +++-+..-+++..|++|+|
T Consensus       204 ---~~~~~~~~~~~~g~dri--l~GSD~-P~--------------~~~~~~~~~~~~~---~l~~~~~~~i~~~Na~rl~  260 (262)
T c3cjpA_         204 ---FSTFVLKIVINELPLKC--IFGTDM-PF--------------GDLQLSIEAIKKM---SNDSYVANAVLGDNISRLL  260 (262)
T ss_dssp             ---SCHHHHHHHHHHSTTTE--ECCCCT-TS--------------SCHHHHHHHHHHH---CSSHHHHHHHHTHHHHHHH
T ss_pred             ---CHHHHHHHHHHHCCCEE--EEECCC-CC--------------CCHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHH
T ss_conf             ---88999999985092319--990386-89--------------9989999999947---9898999999713399995


Q ss_pred             CC
Q ss_conf             88
Q batch____       305 GL  306 (348)
Q Consensus       305 gl  306 (348)
                      ||
T Consensus       261 ~l  262 (262)
T c3cjpA_         261 NI  262 (262)
T ss_dssp             TC
T ss_pred             CC
T ss_conf             85