Phyre 2 alignment of P0A9V1 with c2x8aA_

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Job Description | P0A9V1
Confidence | 94.37% | Date | Thu Jan 5 11:11:27 GMT 2012
Rank | 419 | Aligned Residues | 30
% Identity | 30% | Template | c2x8aA_
PDB info | PDB header:nuclear protein | Chain: A: PDB Molecule:nuclear valosin-containing protein-like; | PDBTitle: human nuclear valosin containing protein like (nvl), c-2 terminal aaa-atpase domain
Resolution | 2.60 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | V | N | S | G | E | I | V | G | L | L | G | P | N | G | A | G | K | T | T | T | F | Y | M | V | V | G | I | V | P | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | V | T | P | A | G | V | L | L | A | G | P | P | G | C | G | K | T | L | L | A | K | A | V | A | N | E | S | G | L
Template Known Secondary structure |  |  |  |  |  | S |  |  |  |  |  | S | S | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 612 | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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