BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (170 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_A8ALJ9 Secretion monitor n=7 Tax=Enterobacteriaceae Rep... 277 8e-74 UniRef50_C8QAD0 Secretion monitor family proten n=1 Tax=Pantoea ... 156 3e-37 UniRef50_D2BWK1 Secretion monitor family proten n=1 Tax=Dickeya ... 141 9e-33 UniRef50_A1JJK1 Secretion monitor n=122 Tax=Bacteria RepID=SECM_... 131 1e-29 UniRef50_Q7N155 Secretion monitor n=1 Tax=Photorhabdus luminesce... 118 6e-26 UniRef50_C7BQ34 Secretion monitor n=1 Tax=Photorhabdus asymbioti... 117 1e-25 UniRef50_Q2NVU4 Secretion monitor n=1 Tax=Sodalis glossinidius s... 117 1e-25 UniRef50_B4F103 Secretion monitor n=3 Tax=Proteus RepID=SECM_PROMH 116 4e-25 UniRef50_D0ZCL1 SecA regulator SecM n=2 Tax=Edwardsiella RepID=D... 105 8e-22 UniRef50_B2Q1Y0 Putative uncharacterized protein n=1 Tax=Provide... 103 2e-21 UniRef50_UPI0001C34639 SecA regulator SecM n=1 Tax=Providencia r... 100 2e-20 UniRef50_D1P427 Secretion monitor n=2 Tax=Providencia RepID=D1P4... 99 5e-20 UniRef50_D2U1T4 Secretion monitor protein n=1 Tax=Arsenophonus n... 99 6e-20 UniRef50_C6C9L6 Secretion monitor family proten n=1 Tax=Dickeya ... 89 5e-17 >UniRef50_A8ALJ9 Secretion monitor n=7 Tax=Enterobacteriaceae RepID=SECM_CITK8 Length = 168 Score = 277 bits (709), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 136/170 (80%), Positives = 146/170 (85%), Gaps = 2/170 (1%) Query: 1 MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPAKATTRNHEPSAKVNFG 60 MSGILTRWRQ G+RYFWPHLLLGMVAAS GLPALSNAAEPN PAKAT NH+ S KVNF Sbjct: 1 MSGILTRWRQLGRRYFWPHLLLGMVAASFGLPALSNAAEPNTPAKATASNHDQSVKVNFS 60 Query: 61 QLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAPQTLPVAEESLPLQAQHLALLD 120 QLALLEA+ RRPN ++VDYWHQHAIRTVIRHLSFAMAPQTLPV EES PLQA H+ALL+ Sbjct: 61 QLALLEASNRRPN--FTVDYWHQHAIRTVIRHLSFAMAPQTLPVVEESSPLQAHHIALLN 118 Query: 121 TLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQGIRAGPQRLT 170 TLSA+LTQEGTP R+ AHFTPQA FS P WISQAQGIRAGPQRL+ Sbjct: 119 TLSAMLTQEGTPPTIVRRVARAHFTPQASFSVPAWISQAQGIRAGPQRLS 168 >UniRef50_C8QAD0 Secretion monitor family proten n=1 Tax=Pantoea sp. At-9b RepID=C8QAD0_9ENTR Length = 168 Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 86/175 (49%), Positives = 111/175 (63%), Gaps = 15/175 (8%) Query: 1 MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPAKATTRNHEPSAKVNFG 60 M GI +RWRQFG+RYFWPHLLLGMVAAS GLPA + AEP++ A + V F Sbjct: 1 MIGIFSRWRQFGRRYFWPHLLLGMVAASFGLPACAQTAEPSS-ADTPVSSLFVGNIVRFD 59 Query: 61 QLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAPQTLPVAEESLPLQAQHLALLD 120 L L+ RRP+ ++VDYWHQHAIRTVIRHLSF+M P +++++PL AQ LAL+D Sbjct: 60 HLIRLQETARRPS--FNVDYWHQHAIRTVIRHLSFSMTPPAQAQSDQAVPLAAQKLALID 117 Query: 121 TLSALLTQEGTPS-----EKGYRIDYAHFTPQAKFSTP-VWISQAQGIRAGPQRL 169 +L ALLT P ++ R+ + + +TP W+S QGIRAGP L Sbjct: 118 SLQALLTSPALPQMLAEPQRAVRVS------EPQINTPAFWLSALQGIRAGPSLL 166 >UniRef50_D2BWK1 Secretion monitor family proten n=1 Tax=Dickeya dadantii Ech586 RepID=D2BWK1_DICD5 Length = 168 Score = 141 bits (355), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 87/173 (50%), Positives = 108/173 (62%), Gaps = 15/173 (8%) Query: 1 MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPA-----LSNAAEPNAPAKATTRNHEPSA 55 M GIL RWRQFG+RYFWPHLLLGMVAA+LGLPA A EPN+ + + N + Sbjct: 1 MIGILNRWRQFGRRYFWPHLLLGMVAATLGLPANFAESRDTATEPNSASAFSRPN---VS 57 Query: 56 KVNFGQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMA-PQTLPVAEESLPLQAQ 114 N LA L+ + RR S +S D+WHQHAIRTVIRHLSFA P T+ A E+ L Sbjct: 58 YFNLTDLAALKDSRRR--SPFSNDFWHQHAIRTVIRHLSFAFTPPATIIEAAEASRLH-H 114 Query: 115 HLALLDTLSALLTQEGTPSEKG-YRIDYAHFTPQAKFSTPVWISQAQGIRAGP 166 H LL+TL+ALLT+E P + +F+P T +W++Q QGIRAGP Sbjct: 115 HQVLLETLNALLTREAAPQRTASTELAPTYFSPSHH--TGLWLAQVQGIRAGP 165 >UniRef50_A1JJK1 Secretion monitor n=122 Tax=Bacteria RepID=SECM_YERE8 Length = 177 Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 91/176 (51%), Positives = 112/176 (63%), Gaps = 13/176 (7%) Query: 1 MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPA-LSNAAEPNA-PAKATTRNHEPSAKVN 58 M GIL RWRQFG+RYFWPHLLLGMVAASLG+P+ LS + A P +++++ + N Sbjct: 1 MIGILNRWRQFGRRYFWPHLLLGMVAASLGVPSNLSGVPDQAAIPNTSSSQSRQNYGATN 60 Query: 59 FGQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAPQT-------LPVAEESLPL 111 F LALL RRP ++SVDYW QHA+RTVIRHLSFA+APQ + AE+ P Sbjct: 61 FSSLALLHDMHRRP--SFSVDYWQQHALRTVIRHLSFALAPQVAYARVQEVAEAEQVQPS 118 Query: 112 QAQHLALLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTP-VWISQAQGIRAGP 166 Q Q LALL+TL+ALLT E P R P P +W++Q QGIRAGP Sbjct: 119 QIQQLALLNTLNALLTHEFKPPTI-IRYTEQIKRPVLSLHKPGLWLAQVQGIRAGP 173 >UniRef50_Q7N155 Secretion monitor n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=SECM_PHOLL Length = 174 Score = 118 bits (296), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 70/174 (40%), Positives = 102/174 (58%), Gaps = 15/174 (8%) Query: 3 GILTRWRQFGKRYFWPHLLLGMVAASLGLPAL-----SNAAEPNAPAKATTRNHEPSAKV 57 GIL WRQFG+RYFW HLLLG+VAAS+G P + N ++ N + +N SA Sbjct: 2 GILNLWRQFGRRYFWSHLLLGVVAASIGAPTILAGVTDNISQANTSPSQSWQNQALSA-- 59 Query: 58 NFGQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMA---PQTLPVAEESLPLQAQ 114 F L L+ +P + V+YW QHA+R VIR LSFA + P + A++S+ L + Sbjct: 60 -FDNLFSLQNVQHQPAN--GVNYWQQHAVRNVIRQLSFAFSISQPMSDETAKQSIRLSSS 116 Query: 115 HLA--LLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQGIRAGP 166 ++ +L+TL+ LL +E P E I + + Q+ + +WI++AQGIRAGP Sbjct: 117 NIQQLVLETLNTLLIREPKPPEPVLDIPFLNVASQSSYILTLWIAKAQGIRAGP 170 >UniRef50_C7BQ34 Secretion monitor n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BQ34_PHOAA Length = 176 Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 71/174 (40%), Positives = 98/174 (56%), Gaps = 15/174 (8%) Query: 4 ILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPAKATT------RNHEPSAKV 57 IL WRQFG+RYFWPHLLLGMVAAS+G+P + N +A T +N SA Sbjct: 3 ILNLWRQFGRRYFWPHLLLGMVAASIGVPTILVGVTNNILLQANTSSCQCWQNQALSAFD 62 Query: 58 NFGQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAM---APQTLPVAEESLPLQAQ 114 N + N +R ++N V+YW QHA+R +IRHLSFA P A++S+ L + Sbjct: 63 NL----FSQQNIQRQSANNGVNYWQQHAVRNMIRHLSFAFFVSQPINNETAKQSIRLSSS 118 Query: 115 HLA--LLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQGIRAGP 166 ++ +L+TL+ LLT+E E Q+ + WI++AQGIRAGP Sbjct: 119 NIQQLVLETLNGLLTRELQLPEPVSNTQLPITVSQSSHTPAFWIAKAQGIRAGP 172 >UniRef50_Q2NVU4 Secretion monitor n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=SECM_SODGM Length = 167 Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 77/170 (45%), Positives = 96/170 (56%), Gaps = 14/170 (8%) Query: 3 GILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAE------PNAPAKATTRNHEPSAK 56 GIL RWRQ G+RYFWPHLLLG+VAA G+P L + N P + + + + + Sbjct: 2 GILNRWRQIGRRYFWPHLLLGIVAAGFGVPLLPGGGQEMLYQADNCP----SLSRQSAFQ 57 Query: 57 VNFGQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAPQTLPVAEESLPLQAQHL 116 F QLA L+ R + Y+VDYWHQHAIRTVIRHLS A AP LP E PL+ QH Sbjct: 58 AGFSQLARLKDVPCR--TTYAVDYWHQHAIRTVIRHLSIAWAPAPLP--EAVAPLRVQHQ 113 Query: 117 ALLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQGIRAGP 166 LL TL LL +E P R+ + + ++Q QGIRAGP Sbjct: 114 VLLTTLGLLLNREARPPVLVRRLRSTGHVAFIDNRSGIRLTQQQGIRAGP 163 >UniRef50_B4F103 Secretion monitor n=3 Tax=Proteus RepID=SECM_PROMH Length = 175 Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 66/170 (38%), Positives = 102/170 (60%), Gaps = 8/170 (4%) Query: 4 ILTRWRQFGKRYFWPHLLLGMVAASLGLPAL--SNAAEPNAPAKATTRNHEPSAKVNFGQ 61 I+ WRQFG+RYFW HLLLGMVAA +G+P+L ++A P+ +++N + A + F Sbjct: 3 IINFWRQFGRRYFWSHLLLGMVAAGIGMPSLVSAHAENPSQTDTPSSQNRQSQALIAFDN 62 Query: 62 LALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAM---APQTLPVA-EESLPLQAQHLA 117 L L + + P S+++ +YW QHA++ VI+ LSFA +P+ + A +E P+ Sbjct: 63 L-FLRQSVQNPASSFTFNYWQQHAVKNVIKQLSFAFTIHSPELMVKAKDEPSPVANVAEV 121 Query: 118 LLDTLSALLTQEGTPSEKGYRIDYAHFTP-QAKFSTPVWISQAQGIRAGP 166 +LDTL ALLTQ + + I T + + T +W++Q +GIRAGP Sbjct: 122 MLDTLYALLTQAPSSTLVNLPISRGVLTENRISYHTGLWLAQIRGIRAGP 171 >UniRef50_D0ZCL1 SecA regulator SecM n=2 Tax=Edwardsiella RepID=D0ZCL1_EDWTE Length = 166 Score = 105 bits (261), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 78/175 (44%), Positives = 100/175 (57%), Gaps = 22/175 (12%) Query: 1 MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPAKATTRNHEPSAKVNFG 60 M GIL RWRQFG+RYFWPHLL GMVAA+LG P+L+NA +P A+ T +A + Sbjct: 1 MIGILKRWRQFGRRYFWPHLLWGMVAATLGAPSLANAEQPRPSAQTITLQRLIAAHHSHV 60 Query: 61 QLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAP---QTLPVAEESLPLQAQHLA 117 L LL R VDYWHQ+A+R IR LS +AP Q AE+ Q QHL Sbjct: 61 SLQLLSGKRR----GQGVDYWHQYALRIAIRQLSSHLAPSHAQYRLSAEQ----QRQHLV 112 Query: 118 LLDTLSALLTQEGT-----PSEKGYRIDYAHFTPQAKFSTP-VWISQAQGIRAGP 166 LL +LS+LLT++ T P + R P + P +W+++ QGIRAGP Sbjct: 113 LLSSLSSLLTRQPTLYVTPPYSRPSRC-----VPSSHGHLPALWLARVQGIRAGP 162 >UniRef50_B2Q1Y0 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q1Y0_PROST Length = 174 Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/171 (39%), Positives = 97/171 (56%), Gaps = 8/171 (4%) Query: 3 GILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPAK--ATTRNHEPSAKVNFG 60 GIL WRQFG +YFWPHLLLG+VA S+G+P + NA + +++ N + A F Sbjct: 2 GILNLWRQFGIKYFWPHLLLGVVATSIGMPGILNALSDAQQTQFNSSSINRQNQAVNAFD 61 Query: 61 QLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAPQTLPVA----EESLPLQAQHL 116 L ++ R +S+YSV+YW QHA+R VIR L+FA + A E+ PL A + Sbjct: 62 NLFAQQSPQRSSSSSYSVNYWQQHAVRNVIRQLTFAFSISEDDDANQQDEKKGPLLAPQV 121 Query: 117 ALLDTLSALLTQEGTP-SEKGYRIDYAHFTPQAKFSTPVWISQAQGIRAGP 166 +LDTL A+L Q S+ + D+ + + +W++Q GIRAGP Sbjct: 122 -MLDTLYAMLAQRSLQWSDSFDQTDHYAYPHFVAYQPAIWVAQVHGIRAGP 171 >UniRef50_UPI0001C34639 SecA regulator SecM n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI0001C34639 Length = 198 Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 69/180 (38%), Positives = 98/180 (54%), Gaps = 17/180 (9%) Query: 1 MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPAKATTR--NHEPSAKVN 58 + GIL WRQ G++YFW HLLLG+VA +GLP + NA + + + N + A Sbjct: 19 LMGILNFWRQLGRKYFWSHLLLGVVATGVGLPTILNALSDSQHTQVNSSPVNRQSQAVNA 78 Query: 59 FGQLALLEANTRR------PNSNYSVDYWHQHAIRTVIRHLSFAMA----PQTLPVAEES 108 F L + N++R +S+YSV+YW QHA+R VIR L+FA + EE+ Sbjct: 79 FDNL-FAQQNSQRSSSSSSSSSSYSVNYWQQHAVRNVIRQLTFAFSATEDDDVNAATEET 137 Query: 109 LPLQAQHLALLDTLSALLTQEGTPSEKGYRIDYAHFT-PQAKFSTP-VWISQAQGIRAGP 166 L A L +LDTL A+L Q ++ I ++H+ P P +WI+Q GIRAGP Sbjct: 138 EQLIAPQL-MLDTLYAMLAQRSLQWDESV-IQFSHYNYPHIIAYQPAIWIAQVHGIRAGP 195 >UniRef50_D1P427 Secretion monitor n=2 Tax=Providencia RepID=D1P427_9ENTR Length = 175 Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 66/172 (38%), Positives = 91/172 (52%), Gaps = 9/172 (5%) Query: 3 GILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPAK--ATTRNHEPSAKVNFG 60 GIL WR G+RYFW HLLLG+VA +GLP + NA + + +T N + A F Sbjct: 2 GILNFWRHLGRRYFWSHLLLGVVATGVGLPTILNALSQSQQTQINSTPVNRQSQAVNAFD 61 Query: 61 QL-ALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAP-QTLPVAEESLPLQAQHLA- 117 L A + +S+YSV+YW QHA+R VIR L+FA + + + LP + QH A Sbjct: 62 NLFAQQSSQRSSSSSSYSVNYWQQHAVRNVIRQLTFAFSTNEDEDTGKRVLP-KEQHFAP 120 Query: 118 --LLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTP-VWISQAQGIRAGP 166 ++DTL A+L Q + H P P +W++Q GIRAGP Sbjct: 121 QLMIDTLYAMLAQRSLQRDVASLQSSHHIYPTFTVYQPAIWVAQVHGIRAGP 172 >UniRef50_D2U1T4 Secretion monitor protein n=1 Tax=Arsenophonus nasoniae RepID=D2U1T4_9ENTR Length = 167 Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 59/169 (34%), Positives = 88/169 (52%), Gaps = 8/169 (4%) Query: 3 GILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPAKATTRNHEPSAKVNFGQL 62 IL WR FGKRYFWPHLLLG+V AS+G+P N + T P+ + N Sbjct: 2 NILDLWRHFGKRYFWPHLLLGIVTASIGIPTTLAKVTENM---SHTSQLLPNYQQNLALD 58 Query: 63 ALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAM-APQTLPVAEESLPLQAQHLAL--- 118 L + R N +YWHQHA+R +IR L+F A +T +L ++ + ++L Sbjct: 59 HLQAVSKYRIFYNCGANYWHQHALRNMIRQLTFVFSAYETQKQLAANLSVRKKSISLYNM 118 Query: 119 LDTLSALLT-QEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQGIRAGP 166 LDTL +++ P+E+ + + + T +W++ QGIRAGP Sbjct: 119 LDTLYSMVNLSVFYPNEQNFTNSLTQSSYHIAYQTALWVAWGQGIRAGP 167 >UniRef50_C6C9L6 Secretion monitor family proten n=1 Tax=Dickeya dadantii Ech703 RepID=C6C9L6_DICDC Length = 144 Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 63/149 (42%), Positives = 83/149 (55%), Gaps = 13/149 (8%) Query: 24 MVAASLGLPALSNAAEPNAPAKATTRNHEPSAKVNFGQLALLEA--NTRRPNSNYSVDYW 81 MVAA+LGLPA + A ++A + + V++ L LEA +TRR S + DYW Sbjct: 1 MVAATLGLPANNFTESREASSQANSTSAISRHNVSYFSLTDLEALKDTRR-RSPLTTDYW 59 Query: 82 HQHAIRTVIRHLSFAMAPQTLPVAEESLPLQAQHLALLDTLSALLTQEGTPSEKGYRIDY 141 HQHAIRTVIRHLSFA P V +E + H LLDTL+ALL ++ P Sbjct: 60 HQHAIRTVIRHLSFAFTPHETVVRQE-VGASLHHQVLLDTLNALLMRDAKPPVS----PL 114 Query: 142 AHFTPQAKFSTP----VWISQAQGIRAGP 166 P + FS P +W++Q+ GIRAGP Sbjct: 115 LSVVP-SIFSMPYQSGIWLAQSMGIRAGP 142 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A8ALJ9 Secretion monitor n=7 Tax=Enterobacteriaceae Rep... 229 2e-59 UniRef50_C8QAD0 Secretion monitor family proten n=1 Tax=Pantoea ... 196 3e-49 UniRef50_B4F103 Secretion monitor n=3 Tax=Proteus RepID=SECM_PROMH 195 6e-49 UniRef50_Q7N155 Secretion monitor n=1 Tax=Photorhabdus luminesce... 193 2e-48 UniRef50_C7BQ34 Secretion monitor n=1 Tax=Photorhabdus asymbioti... 190 2e-47 UniRef50_B2Q1Y0 Putative uncharacterized protein n=1 Tax=Provide... 190 2e-47 UniRef50_D2BWK1 Secretion monitor family proten n=1 Tax=Dickeya ... 189 2e-47 UniRef50_UPI0001C34639 SecA regulator SecM n=1 Tax=Providencia r... 188 6e-47 UniRef50_D2U1T4 Secretion monitor protein n=1 Tax=Arsenophonus n... 182 3e-45 UniRef50_D1P427 Secretion monitor n=2 Tax=Providencia RepID=D1P4... 180 1e-44 UniRef50_Q2NVU4 Secretion monitor n=1 Tax=Sodalis glossinidius s... 177 2e-43 UniRef50_A1JJK1 Secretion monitor n=122 Tax=Bacteria RepID=SECM_... 176 3e-43 UniRef50_D0ZCL1 SecA regulator SecM n=2 Tax=Edwardsiella RepID=D... 150 1e-35 UniRef50_C6C9L6 Secretion monitor family proten n=1 Tax=Dickeya ... 140 2e-32 Sequences not found previously or not previously below threshold: CONVERGED! >UniRef50_A8ALJ9 Secretion monitor n=7 Tax=Enterobacteriaceae RepID=SECM_CITK8 Length = 168 Score = 229 bits (585), Expect = 2e-59, Method: Composition-based stats. Identities = 136/170 (80%), Positives = 146/170 (85%), Gaps = 2/170 (1%) Query: 1 MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPAKATTRNHEPSAKVNFG 60 MSGILTRWRQ G+RYFWPHLLLGMVAAS GLPALSNAAEPN PAKAT NH+ S KVNF Sbjct: 1 MSGILTRWRQLGRRYFWPHLLLGMVAASFGLPALSNAAEPNTPAKATASNHDQSVKVNFS 60 Query: 61 QLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAPQTLPVAEESLPLQAQHLALLD 120 QLALLEA+ RRP N++VDYWHQHAIRTVIRHLSFAMAPQTLPV EES PLQA H+ALL+ Sbjct: 61 QLALLEASNRRP--NFTVDYWHQHAIRTVIRHLSFAMAPQTLPVVEESSPLQAHHIALLN 118 Query: 121 TLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQGIRAGPQRLT 170 TLSA+LTQEGTP R+ AHFTPQA FS P WISQAQGIRAGPQRL+ Sbjct: 119 TLSAMLTQEGTPPTIVRRVARAHFTPQASFSVPAWISQAQGIRAGPQRLS 168 >UniRef50_C8QAD0 Secretion monitor family proten n=1 Tax=Pantoea sp. At-9b RepID=C8QAD0_9ENTR Length = 168 Score = 196 bits (497), Expect = 3e-49, Method: Composition-based stats. Identities = 83/170 (48%), Positives = 103/170 (60%), Gaps = 3/170 (1%) Query: 1 MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPAKATTRNHEPSAKVNFG 60 M GI +RWRQFG+RYFWPHLLLGMVAAS GLPA + AEP+ A + V F Sbjct: 1 MIGIFSRWRQFGRRYFWPHLLLGMVAASFGLPACAQTAEPS-SADTPVSSLFVGNIVRFD 59 Query: 61 QLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAPQTLPVAEESLPLQAQHLALLD 120 L L+ RRP +++VDYWHQHAIRTVIRHLSF+M P +++++PL AQ LAL+D Sbjct: 60 HLIRLQETARRP--SFNVDYWHQHAIRTVIRHLSFSMTPPAQAQSDQAVPLAAQKLALID 117 Query: 121 TLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQGIRAGPQRLT 170 +L ALLT P + + W+S QGIRAGP L Sbjct: 118 SLQALLTSPALPQMLAEPQRAVRVSEPQINTPAFWLSALQGIRAGPSLLN 167 >UniRef50_B4F103 Secretion monitor n=3 Tax=Proteus RepID=SECM_PROMH Length = 175 Score = 195 bits (495), Expect = 6e-49, Method: Composition-based stats. Identities = 66/174 (37%), Positives = 102/174 (58%), Gaps = 8/174 (4%) Query: 2 SGILTRWRQFGKRYFWPHLLLGMVAASLGLPAL--SNAAEPNAPAKATTRNHEPSAKVNF 59 I+ WRQFG+RYFW HLLLGMVAA +G+P+L ++A P+ +++N + A + F Sbjct: 1 MSIINFWRQFGRRYFWSHLLLGMVAAGIGMPSLVSAHAENPSQTDTPSSQNRQSQALIAF 60 Query: 60 GQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAM---APQTLPVA-EESLPLQAQH 115 L L + + P S+++ +YW QHA++ VI+ LSFA +P+ + A +E P+ Sbjct: 61 DNL-FLRQSVQNPASSFTFNYWQQHAVKNVIKQLSFAFTIHSPELMVKAKDEPSPVANVA 119 Query: 116 LALLDTLSALLTQEGTPSEKGYRIDYAHFTP-QAKFSTPVWISQAQGIRAGPQR 168 +LDTL ALLTQ + + I T + + T +W++Q +GIRAGP Sbjct: 120 EVMLDTLYALLTQAPSSTLVNLPISRGVLTENRISYHTGLWLAQIRGIRAGPYL 173 >UniRef50_Q7N155 Secretion monitor n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=SECM_PHOLL Length = 174 Score = 193 bits (491), Expect = 2e-48, Method: Composition-based stats. Identities = 67/173 (38%), Positives = 100/173 (57%), Gaps = 9/173 (5%) Query: 2 SGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPN--APAKATTRNHEPSAKVNF 59 GIL WRQFG+RYFW HLLLG+VAAS+G P + N + +++ + A F Sbjct: 1 MGILNLWRQFGRRYFWSHLLLGVVAASIGAPTILAGVTDNISQANTSPSQSWQNQALSAF 60 Query: 60 GQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMA---PQTLPVAEESLPLQAQHL 116 L L+ +P + V+YW QHA+R VIR LSFA + P + A++S+ L + ++ Sbjct: 61 DNLFSLQNVQHQPAN--GVNYWQQHAVRNVIRQLSFAFSISQPMSDETAKQSIRLSSSNI 118 Query: 117 A--LLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQGIRAGPQ 167 +L+TL+ LL +E P E I + + Q+ + +WI++AQGIRAGP Sbjct: 119 QQLVLETLNTLLIREPKPPEPVLDIPFLNVASQSSYILTLWIAKAQGIRAGPT 171 >UniRef50_C7BQ34 Secretion monitor n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BQ34_PHOAA Length = 176 Score = 190 bits (482), Expect = 2e-47, Method: Composition-based stats. Identities = 70/174 (40%), Positives = 98/174 (56%), Gaps = 9/174 (5%) Query: 2 SGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPAKATTRN---HEPSAKVN 58 IL WRQFG+RYFWPHLLLGMVAAS+G+P + N +A T + + A Sbjct: 1 MSILNLWRQFGRRYFWPHLLLGMVAASIGVPTILVGVTNNILLQANTSSCQCWQNQALSA 60 Query: 59 FGQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAM---APQTLPVAEESLPLQAQH 115 F L + N +R ++N V+YW QHA+R +IRHLSFA P A++S+ L + + Sbjct: 61 FDNL-FSQQNIQRQSANNGVNYWQQHAVRNMIRHLSFAFFVSQPINNETAKQSIRLSSSN 119 Query: 116 LA--LLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQGIRAGPQ 167 + +L+TL+ LLT+E E Q+ + WI++AQGIRAGP Sbjct: 120 IQQLVLETLNGLLTRELQLPEPVSNTQLPITVSQSSHTPAFWIAKAQGIRAGPS 173 >UniRef50_B2Q1Y0 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q1Y0_PROST Length = 174 Score = 190 bits (482), Expect = 2e-47, Method: Composition-based stats. Identities = 66/173 (38%), Positives = 93/173 (53%), Gaps = 8/173 (4%) Query: 2 SGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPAKATTR--NHEPSAKVNF 59 GIL WRQFG +YFWPHLLLG+VA S+G+P + NA + + N + A F Sbjct: 1 MGILNLWRQFGIKYFWPHLLLGVVATSIGMPGILNALSDAQQTQFNSSSINRQNQAVNAF 60 Query: 60 GQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAPQTLPVA----EESLPLQAQH 115 L ++ R +S+YSV+YW QHA+R VIR L+FA + A E+ PL A Sbjct: 61 DNLFAQQSPQRSSSSSYSVNYWQQHAVRNVIRQLTFAFSISEDDDANQQDEKKGPLLAPQ 120 Query: 116 LALLDTLSALLTQEGTPS-EKGYRIDYAHFTPQAKFSTPVWISQAQGIRAGPQ 167 +LDTL A+L Q + + D+ + + +W++Q GIRAGP Sbjct: 121 -VMLDTLYAMLAQRSLQWSDSFDQTDHYAYPHFVAYQPAIWVAQVHGIRAGPA 172 >UniRef50_D2BWK1 Secretion monitor family proten n=1 Tax=Dickeya dadantii Ech586 RepID=D2BWK1_DICD5 Length = 168 Score = 189 bits (481), Expect = 2e-47, Method: Composition-based stats. Identities = 81/169 (47%), Positives = 101/169 (59%), Gaps = 7/169 (4%) Query: 1 MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNA--PAKATTRNHEPSAKVN 58 M GIL RWRQFG+RYFWPHLLLGMVAA+LGLPA + A P A+ + + N Sbjct: 1 MIGILNRWRQFGRRYFWPHLLLGMVAATLGLPANFAESRDTATEPNSASAFSRPNVSYFN 60 Query: 59 FGQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAPQTLPVAEESLPLQAQHLAL 118 LA L+ + RR S +S D+WHQHAIRTVIRHLSFA P + H L Sbjct: 61 LTDLAALKDSRRR--SPFSNDFWHQHAIRTVIRHLSFAFTPPATIIEAAEASRLHHHQVL 118 Query: 119 LDTLSALLTQEGTPSEKGY-RIDYAHFTPQAKFSTPVWISQAQGIRAGP 166 L+TL+ALLT+E P + +F+P T +W++Q QGIRAGP Sbjct: 119 LETLNALLTREAAPQRTASTELAPTYFSP--SHHTGLWLAQVQGIRAGP 165 >UniRef50_UPI0001C34639 SecA regulator SecM n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI0001C34639 Length = 198 Score = 188 bits (478), Expect = 6e-47, Method: Composition-based stats. Identities = 65/178 (36%), Positives = 93/178 (52%), Gaps = 13/178 (7%) Query: 1 MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPAKATTR--NHEPSAKVN 58 + GIL WRQ G++YFW HLLLG+VA +GLP + NA + + + N + A Sbjct: 19 LMGILNFWRQLGRKYFWSHLLLGVVATGVGLPTILNALSDSQHTQVNSSPVNRQSQAVNA 78 Query: 59 FGQLALLEANTR-----RPNSNYSVDYWHQHAIRTVIRHLSFAMA----PQTLPVAEESL 109 F L + + R +S+YSV+YW QHA+R VIR L+FA + EE+ Sbjct: 79 FDNLFAQQNSQRSSSSSSSSSSYSVNYWQQHAVRNVIRQLTFAFSATEDDDVNAATEETE 138 Query: 110 PLQAQHLALLDTLSALLTQEGTPS-EKGYRIDYAHFTPQAKFSTPVWISQAQGIRAGP 166 L A L +LDTL A+L Q E + + ++ + +WI+Q GIRAGP Sbjct: 139 QLIAPQL-MLDTLYAMLAQRSLQWDESVIQFSHYNYPHIIAYQPAIWIAQVHGIRAGP 195 >UniRef50_D2U1T4 Secretion monitor protein n=1 Tax=Arsenophonus nasoniae RepID=D2U1T4_9ENTR Length = 167 Score = 182 bits (463), Expect = 3e-45, Method: Composition-based stats. Identities = 58/170 (34%), Positives = 88/170 (51%), Gaps = 8/170 (4%) Query: 2 SGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPAKATTRNHEPSAKVNFGQ 61 IL WR FGKRYFWPHLLLG+V AS+G+P N + T P+ + N Sbjct: 1 MNILDLWRHFGKRYFWPHLLLGIVTASIGIPTTLAKVTENM---SHTSQLLPNYQQNLAL 57 Query: 62 LALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAM-APQTLPVAEESLPLQAQHLA--- 117 L + R N +YWHQHA+R +IR L+F A +T +L ++ + ++ Sbjct: 58 DHLQAVSKYRIFYNCGANYWHQHALRNMIRQLTFVFSAYETQKQLAANLSVRKKSISLYN 117 Query: 118 LLDTLSALLT-QEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQGIRAGP 166 +LDTL +++ P+E+ + + + T +W++ QGIRAGP Sbjct: 118 MLDTLYSMVNLSVFYPNEQNFTNSLTQSSYHIAYQTALWVAWGQGIRAGP 167 >UniRef50_D1P427 Secretion monitor n=2 Tax=Providencia RepID=D1P427_9ENTR Length = 175 Score = 180 bits (457), Expect = 1e-44, Method: Composition-based stats. Identities = 62/172 (36%), Positives = 88/172 (51%), Gaps = 7/172 (4%) Query: 2 SGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPAKATTR--NHEPSAKVNF 59 GIL WR G+RYFW HLLLG+VA +GLP + NA + + + N + A F Sbjct: 1 MGILNFWRHLGRRYFWSHLLLGVVATGVGLPTILNALSQSQQTQINSTPVNRQSQAVNAF 60 Query: 60 GQL-ALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAPQTLPVAEESLPLQAQHLA- 117 L A + +S+YSV+YW QHA+R VIR L+FA + + + + QH A Sbjct: 61 DNLFAQQSSQRSSSSSSYSVNYWQQHAVRNVIRQLTFAFSTNEDEDTGKRVLPKEQHFAP 120 Query: 118 --LLDTLSALLTQEGTPSEKGYRIDYAHFTPQAK-FSTPVWISQAQGIRAGP 166 ++DTL A+L Q + H P + +W++Q GIRAGP Sbjct: 121 QLMIDTLYAMLAQRSLQRDVASLQSSHHIYPTFTVYQPAIWVAQVHGIRAGP 172 >UniRef50_Q2NVU4 Secretion monitor n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=SECM_SODGM Length = 167 Score = 177 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 75/167 (44%), Positives = 94/167 (56%), Gaps = 6/167 (3%) Query: 2 SGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPN--APAKATTRNHEPSAKVNF 59 GIL RWRQ G+RYFWPHLLLG+VAA G+P L + + + + + + F Sbjct: 1 MGILNRWRQIGRRYFWPHLLLGIVAAGFGVPLLPGGGQEMLYQADNCPSLSRQSAFQAGF 60 Query: 60 GQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAPQTLPVAEESLPLQAQHLALL 119 QLA L+ R + Y+VDYWHQHAIRTVIRHLS A AP LP E PL+ QH LL Sbjct: 61 SQLARLKDVPCR--TTYAVDYWHQHAIRTVIRHLSIAWAPAPLP--EAVAPLRVQHQVLL 116 Query: 120 DTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQGIRAGP 166 TL LL +E P R+ + + ++Q QGIRAGP Sbjct: 117 TTLGLLLNREARPPVLVRRLRSTGHVAFIDNRSGIRLTQQQGIRAGP 163 >UniRef50_A1JJK1 Secretion monitor n=122 Tax=Bacteria RepID=SECM_YERE8 Length = 177 Score = 176 bits (446), Expect = 3e-43, Method: Composition-based stats. Identities = 85/176 (48%), Positives = 109/176 (61%), Gaps = 11/176 (6%) Query: 1 MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAA--EPNAPAKATTRNHEPSAKVN 58 M GIL RWRQFG+RYFWPHLLLGMVAASLG+P+ + + P +++++ + N Sbjct: 1 MIGILNRWRQFGRRYFWPHLLLGMVAASLGVPSNLSGVPDQAAIPNTSSSQSRQNYGATN 60 Query: 59 FGQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAP-------QTLPVAEESLPL 111 F LALL RRP ++SVDYW QHA+RTVIRHLSFA+AP Q + AE+ P Sbjct: 61 FSSLALLHDMHRRP--SFSVDYWQQHALRTVIRHLSFALAPQVAYARVQEVAEAEQVQPS 118 Query: 112 QAQHLALLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQGIRAGPQ 167 Q Q LALL+TL+ALLT E P + + +W++Q QGIRAGP Sbjct: 119 QIQQLALLNTLNALLTHEFKPPTIIRYTEQIKRPVLSLHKPGLWLAQVQGIRAGPA 174 >UniRef50_D0ZCL1 SecA regulator SecM n=2 Tax=Edwardsiella RepID=D0ZCL1_EDWTE Length = 166 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 74/168 (44%), Positives = 96/168 (57%), Gaps = 6/168 (3%) Query: 1 MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPAKATTRNHEPSAKVNFG 60 M GIL RWRQFG+RYFWPHLL GMVAA+LG P+L+NA +P A+ T +A + Sbjct: 1 MIGILKRWRQFGRRYFWPHLLWGMVAATLGAPSLANAEQPRPSAQTITLQRLIAAHHSHV 60 Query: 61 QLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAPQTLPVAEESLPLQAQHLALLD 120 L LL R VDYWHQ+A+R IR LS +AP + S Q QHL LL Sbjct: 61 SLQLLSGKRR----GQGVDYWHQYALRIAIRQLSSHLAP-SHAQYRLSAEQQRQHLVLLS 115 Query: 121 TLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTP-VWISQAQGIRAGPQ 167 +LS+LLT++ T + P + P +W+++ QGIRAGP Sbjct: 116 SLSSLLTRQPTLYVTPPYSRPSRCVPSSHGHLPALWLARVQGIRAGPA 163 >UniRef50_C6C9L6 Secretion monitor family proten n=1 Tax=Dickeya dadantii Ech703 RepID=C6C9L6_DICDC Length = 144 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 57/144 (39%), Positives = 78/144 (54%), Gaps = 3/144 (2%) Query: 24 MVAASLGLPALSNAAEPNAPAKATTRNHEPSAKVNFGQLALLEANT-RRPNSNYSVDYWH 82 MVAA+LGLPA + A ++A + + V++ L LEA R S + DYWH Sbjct: 1 MVAATLGLPANNFTESREASSQANSTSAISRHNVSYFSLTDLEALKDTRRRSPLTTDYWH 60 Query: 83 QHAIRTVIRHLSFAMAPQTLPVAEESLPLQAQHLALLDTLSALLTQEGTPSEKGYRIDYA 142 QHAIRTVIRHLSFA P V +E + H LLDTL+ALL ++ P + Sbjct: 61 QHAIRTVIRHLSFAFTPHETVVRQE-VGASLHHQVLLDTLNALLMRDAKPPVSPL-LSVV 118 Query: 143 HFTPQAKFSTPVWISQAQGIRAGP 166 + + +W++Q+ GIRAGP Sbjct: 119 PSIFSMPYQSGIWLAQSMGIRAGP 142 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.138 0.439 Lambda K H 0.267 0.0418 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 688,549,513 Number of Sequences: 3077464 Number of extensions: 24028223 Number of successful extensions: 81402 Number of sequences better than 1.0e-01: 18 Number of HSP's better than 0.1 without gapping: 28 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 81302 Number of HSP's gapped (non-prelim): 35 length of query: 170 length of database: 1,040,396,356 effective HSP length: 119 effective length of query: 51 effective length of database: 674,178,140 effective search space: 34383085140 effective search space used: 34383085140 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 88 (38.5 bits)