Phyre 2 alignment of P62395 with c2kfdA_

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Job Description | P62395
Confidence | 6.10% | Date | Thu Jan 5 12:07:29 GMT 2012
Rank | 21 | Aligned Residues | 18
% Identity | 50% | Template | c2kfdA_
PDB info | PDB header:nuclear protein | Chain: A: PDB Molecule:pre-mrna-processing protein prp40; | PDBTitle: prp40 ff4 domain
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | R | Y | F | W | P | H | L | L | L | G | M | V | A | A | S | L | G | L | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Sequence |  | K | H | Y | F | W | . | . | L | L | L | Q | R | T | Y | T | K | T | G | K | P
Template Known Secondary structure |  |  |  |  |  |  | . | . |  |  |  |  |  |  | S |  | S | S | S | S |
Template Predicted Secondary structure |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 14 | . | . | . | . |  |  | . | 20 | . | . | . | . | . | . | . | . | . | 30 | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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