Phyre 2 alignment of P62395 with d1yaro1

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Job Description | P62395
Confidence | 4.36% | Date | Thu Jan 5 12:07:29 GMT 2012
Rank | 40 | Aligned Residues | 36
% Identity | 39% | Template | d1yaro1
SCOP info | Four-helical up-and-down bundle | Proteasome activator | Proteasome activator
Resolution | 1.90

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |  | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |  |  | . | . | 120 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |
Query Sequence |  | Y | W | H | Q | H | A | I | R | T | V | I | R | H | L | S | F | A | M | . | A | P | Q | T | L | P | V | A | E | E | S | L | P | L | Q | A | Q | H | L | A | . | . | L | L | D | T | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  | . |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | C | Q | A | E | T | I | R | T | V | I | . | . | . | . | . | A | I | R | I | P | E | H | K | E | . | . | E | D | N | L | G | V | A | V | Q | H | A | V | L | K | I | I | D | E | L
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  | T | T |  |  |  |  |  | S | . | . | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 82 | . | . | . | . | . | . | . | 90 | . | . |  |  |  |  |  | . | . | . | . | . | . | . | 100 | . |  |  | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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