479 c3rfaA_ Probab=68.05   E-value=9  Score=18.30  Aligned_columns=97  Identities=15%

Q ss_pred             HHHHHHCCCCEEEECCCCCHHHH--------------------HHHHHHHHHCCCEEEE---EEC-CCCCHHHHHHHHHH
Q ss_conf             99998559989998344780108--------------------9999999988992999---951-89898999999965
Q batch____        73 IAQLARAGADFITLHPETINGQA--------------------FRLIDEIRRHDMKVGL---ILN-PETPVEAMKYYIHK  128 (231)
Q Consensus        73 i~~~~~aGad~v~vh~e~~~~~~--------------------~~~i~~~k~~G~k~~i---~l~-p~t~~~~~~~~~~~  128 (231)
                      ++.+++.+.+.+.+..+++.++.                    .++.+...+.|.++.+   .+. ++.+.+.++.+++.
T Consensus       203 i~~L~~~~~~~l~isl~a~~~e~r~~l~p~~k~~~l~~i~~~~~~~~~~~~~~g~~v~i~y~li~g~nDs~e~a~~l~~~  282 (333)
T c3rfaA_         203 LDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAEL  282 (333)
T ss_dssp             HHHHHHHCCCEEEEECCCSSHHHHHHHSGGGGTSCHHHHHHHHHHHHHHCTTTTTCEEEEEEEBTTTTCSHHHHHHHHHH
T ss_pred             HHHHHHHCCCEEEECCCCCCHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHH
T ss_conf             99987315848998067798778623140678889999999999999977643980899855408999898999999999


Q ss_pred             C----CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf             2----98999995188651001100389999999998751898338
Q batch____       129 A----DKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEI  170 (231)
Q Consensus       129 ~----d~vl~~~v~~G~~G~~~~~~~~~ki~~l~~~~~~~~~~~~i  170 (231)
                      +    ..|.+.-.+| ..|-.|.+.+.+++..+.+.+++++..+.+
T Consensus       283 l~~~~~~Vnlip~nP-~~g~~~~~p~~e~i~~f~~~L~~~Gi~v~i  327 (333)
T c3rfaA_         283 LKDTPCKINLIPWNP-FPGAPYGRSSNSRIDRFSKVLMSYGFTTIV  327 (333)
T ss_dssp             TTTSCEEEEEEECCC-CTTCCCCBCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             HHCCCCEEEEEECCC-CCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf             850898799996246-888887788989999999999978986997