Phyre 2 alignment of P0A6J3 with d2e74d2

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Job Description | P0A6J3
Confidence | 4.64% | Date | Thu Jan 5 11:03:16 GMT 2012
Rank | 8 | Aligned Residues | 29
% Identity | 34% | Template | d2e74d2
SCOP info | Single transmembrane helix | ISP transmembrane anchor | ISP transmembrane anchor
Resolution | 3.00

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 203 | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . |  |  | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | T | R | K | I | T | N | M | Q | F | G | A | L | T | S | . | . | L | F | T | M | I | P | L | L | N | L | F | I | M | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | R | Q | F | M | N | L | L | A | F | G | T | V | T | G | V | A | L | G | A | L | Y | P | L | V | K | Y | F | I | P | P
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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