Phyre 2 alignment of P0A6J3 with d1k1va_

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Job Description | P0A6J3
Confidence | 3.30% | Date | Thu Jan 5 11:03:16 GMT 2012
Rank | 20 | Aligned Residues | 20
% Identity | 10% | Template | d1k1va_
SCOP info | A DNA-binding domain in eukaryotic transcription factors | A DNA-binding domain in eukaryotic transcription factors | A DNA-binding domain in eukaryotic transcription factors
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 189 | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | .
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Query Sequence |  | D | N | H | K | V | P | F | K | E | M | R | T | A | L | R | T | R | K | I | T
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Template Sequence |  | H | L | R | G | L | S | K | E | E | I | I | Q | L | K | Q | R | R | R | T | L
Template Known Secondary structure |  |  |  | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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