Phyre 2 alignment of P0A6J3 with d1iyjb5

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Job Description | P0A6J3
Confidence | 1.95% | Date | Thu Jan 5 11:03:16 GMT 2012
Rank | 52 | Aligned Residues | 22
% Identity | 18% | Template | d1iyjb5
SCOP info | OB-fold | Nucleic acid-binding proteins | Single strand DNA-binding domain, SSB
Resolution | 3.40

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | S | S | F | T | S | A | P | R | S | G | F | Y | Y | F | A | Q | G | W | K | L | V | S | Q
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | S | V | F | S | A | S | P | K | E | A | . | . | H | F | Q | E | R | V | T | N | M | K | H
Template Known Secondary structure |  |  |  |  |  |  | S | S |  | S | S |  | . | . |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 3070 | . | . | . | . | . | . | . | . | . | 3080 |  |  | . | . | . | . | . | . | . | . | . | 3090 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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