08/01/2012 02:10:32 : INFO  : Run start: Sun Jan  8 02:10:30 GMT 2012
08/01/2012 02:10:39 : INFO  : Initialised job
08/01/2012 02:10:41 : INFO  : Renaming log file 'phyre2_20120108_021030.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/0e99a62ab29891d4/phyre_20120108_021030.log'
08/01/2012 02:10:43 : INFO  : Initialised job:
Sequence
>batch____
MRIGMRLLLGYFLLVAVAAWFVLAIFVKEVKPGVRRATEGTLIDTATLLAELARPDLLSG
DPTHGQLAQAFNQLQHRPFRANIGGINKVRNEYHVYMTDAQGKVLFDSANKAVGQDYSRW
NDVWLTLRGQYGARSTLQNPADPESSVMYVAAPIMDGSRLIGVLSVGKPNAAMAPVIKRS
ERRILWASAILLGIALVIGAGMVWWINRSIARLTRYADSVTDNKPVPLPDLGSSELRKLA
QALESMRVKLEGKNYIEQYVYALTHELKSPLAAIRGAAEILREGPPPEVVARFTDNILTQ
NARMQALVETLLRQARLENRQEVVLTAVDVAALFRRVSEARTVQLAEKKITLHVTPTEVN
VAAEPALLEQALGNLLDNAIDFTPESGCITLSAEVDQEHVTLKVLDTGSGIPDYALSRIF
ERFYSLPRANGQKSSGLGLAFVSEVARLFNGEVTLRNVQEGGVLASLRLHRHFT

08/01/2012 02:10:44 : INFO  : Checked sequence
08/01/2012 02:10:49 : INFO  : Finding homologues with PSI-BLAST
08/01/2012 02:10:50 : INFO  : PSI-BLAST 3 iterations
08/01/2012 02:13:49 : INFO  : PSI-BLAST 5 iterations
08/01/2012 02:18:17 : INFO  : Finished PSI-BLAST
08/01/2012 02:18:20 : INFO  : Running Buildali to generate a3m file
08/01/2012 04:18:04 : INFO  : Converting to HMM
08/01/2012 04:18:58 : INFO  : Calibrating HMM
08/01/2012 04:19:17 : INFO  : Searching HMM database
08/01/2012 04:27:42 : INFO  : Finished buildali
08/01/2012 04:27:44 : INFO  : Predicting secondary structure
08/01/2012 04:27:52 : INFO  : Predicted secondary structure (PSI-Pred)
08/01/2012 04:27:54 : INFO  : Predicting Disordered regions
08/01/2012 04:27:58 : INFO  : Predicted Disorder (Disopred)
08/01/2012 04:28:00 : INFO  : Running memsat_svm check
08/01/2012 04:30:32 : INFO  : Globular protein
08/01/2012 04:30:33 : INFO  : Predicted Transmembrane (memsat_svm) ID '0e99a62ab29891d4'
08/01/2012 04:30:35 : INFO  : Initialising fold library search
08/01/2012 04:30:39 : INFO  : Initialised search input
08/01/2012 04:30:42 : INFO  : Building Ensemble models
08/01/2012 04:30:46 : INFO  : Building hh.c3d36B_.model.1.pdb
08/01/2012 04:31:05 : INFO  : Building hh.c3d2rB_.model.2.pdb
08/01/2012 04:31:18 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/0e99a62ab29891d4/hh.c3d2rB_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/0e99a62ab29891d4/c3d2rB_.2.pdb
08/01/2012 04:31:22 : INFO  : Building hh.c2q8fA_.model.3.pdb
08/01/2012 04:31:37 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/0e99a62ab29891d4/hh.c2q8fA_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/0e99a62ab29891d4/c2q8fA_.3.pdb
08/01/2012 04:31:42 : INFO  : Building hh.c2c2aA_.model.4.pdb
08/01/2012 04:31:55 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/0e99a62ab29891d4/hh.c2c2aA_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/0e99a62ab29891d4/c2c2aA_.4.pdb
08/01/2012 04:31:59 : INFO  : Building hh.c2bu8A_.model.5.pdb
08/01/2012 04:32:13 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/0e99a62ab29891d4/hh.c2bu8A_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/0e99a62ab29891d4/c2bu8A_.5.pdb
08/01/2012 04:32:17 : INFO  : Building hh.c1y8oA_.model.6.pdb
08/01/2012 04:32:31 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/0e99a62ab29891d4/hh.c1y8oA_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/0e99a62ab29891d4/c1y8oA_.6.pdb
08/01/2012 04:32:36 : INFO  : Building hh.d1p0za_.model.7.pdb
08/01/2012 04:32:50 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/0e99a62ab29891d4/hh.d1p0za_.model.7.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/0e99a62ab29891d4/d1p0za_.73.pdb
08/01/2012 04:32:54 : INFO  : Building hh.d3by8a1.model.8.pdb
08/01/2012 04:33:07 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/0e99a62ab29891d4/hh.d3by8a1.model.8.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/0e99a62ab29891d4/d3by8a1.75.pdb
08/01/2012 04:33:11 : INFO  : Building c3d36B_.1.pdb
08/01/2012 04:33:27 : INFO  : Building c3d2rB_.2.pdb
08/01/2012 04:33:43 : INFO  : Building c2q8fA_.3.pdb
08/01/2012 04:33:59 : INFO  : Building c2c2aA_.4.pdb
08/01/2012 04:34:14 : INFO  : Building c2bu8A_.5.pdb
08/01/2012 04:34:30 : INFO  : Building c1y8oA_.6.pdb
08/01/2012 04:34:48 : INFO  : Building c1gjvA_.7.pdb
08/01/2012 04:35:03 : INFO  : Building c3a0rA_.8.pdb
08/01/2012 04:35:19 : INFO  : Building c3a0tA_.9.pdb
08/01/2012 04:35:35 : INFO  : Building d2c2aa2.10.pdb
08/01/2012 04:35:51 : INFO  : Building d1jm6a2.11.pdb
08/01/2012 04:36:06 : INFO  : Building d1id0a_.12.pdb
08/01/2012 04:36:22 : INFO  : Building d1gkza2.13.pdb
08/01/2012 04:36:40 : INFO  : Building d1bxda_.14.pdb
08/01/2012 04:36:57 : INFO  : Building c1b3qA_.15.pdb
08/01/2012 04:37:14 : INFO  : Building c2ch4A_.16.pdb
08/01/2012 04:37:31 : INFO  : Building d1ysra1.17.pdb
08/01/2012 04:37:47 : INFO  : Building d1i58a_.18.pdb
08/01/2012 04:38:05 : INFO  : Building c3jz3B_.19.pdb
08/01/2012 04:38:21 : INFO  : Building d1r62a_.20.pdb
08/01/2012 04:41:04 : INFO  : Finished HH model building
08/01/2012 04:41:05 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
08/01/2012 04:42:45 : INFO  : html domain output complete ID '0e99a62ab29891d4'
08/01/2012 05:20:35 : INFO  : Run end  : Sun Jan  8 05:20:34 GMT 2012
