121 c1jscA_ Probab=55.33   E-value=13  Score=16.09  Aligned_columns=127  Identities=12%

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf             99999999999999986185459998268862467899999999998635456787765645678778887642113688
Q batch____       132 DEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQ  211 (848)
Q Consensus       132 dEAld~iA~kl~~i~~~~G~~si~~~~g~~~~~~~~~~~~~~~~f~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  211 (848)
                      .++++.++++|+.      .+......|.+.... ......+.+|...++..+... ..+.+.-....+..+|.. +...
T Consensus       195 ~~~~~~~~~~l~~------ak~pvi~~G~~~~~~-~~~~~~l~~lae~~~~pv~~t-~~~~~~~~~~~p~~~g~~-g~~~  265 (541)
T c1jscA_         195 MQSINKAADLINL------AKKPVLYVGAGILNH-ADGPRLLKELSDRAQIPVTTT-LQGLGSFDQEDPKSLDML-GMHG  265 (541)
T ss_dssp             HHHHHHHHHHHHH------CSSEEEEECGGGGSS-TTHHHHHHHHHHHTTCCEEEC-TTTTTSSCTTSTTEEEEC-STTS
T ss_pred             HHHHHHHHHHHHC------CCCEEEEECCCCCCC-HHHHHHHHHHHHHHCCCEEEC-HHCCCCCCCCCCCCCCCC-CCCC
T ss_conf             8899999999860------797399977876689-789999999999808978832-000756688887420210-2457


Q ss_pred             CCCCHHHHHCCCEEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             888767984188899976987781655556553101268999999998589879997075473
Q batch____       212 QTSWPLVLQNSKTIVLWGSDLLKNQQANWWCPDHDVYEYYAQLKAKVAAGEIEVISIDPVVTS  274 (848)
Q Consensus       212 ~~~~~~d~~~ad~ii~~G~Np~~t~~~~~~~~~~~~~~~~~~~~~~a~~~G~kiVvVDPr~t~  274 (848)
                      ......-++++|+||.+|+...+.....+.....       ...........++|.||.....
T Consensus       266 ~~~~~~~l~~aD~il~iG~~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~i~i~~~~~~  321 (541)
T c1jscA_         266 CATANLAVQNADLIIAVGARFDDRVTGNISKFAP-------EARRAAAEGRGGIIHFEVSPKN  321 (541)
T ss_dssp             CHHHHHHHHHCSEEEEESCCCCHHHHSSGGGSSH-------HHHHHHHTTSCEEEEEESCGGG
T ss_pred             CHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCC-------CCCCCCCCCCCCEEEEECCHHH
T ss_conf             9899999863988999788768220256543365-------2101233678618998489378