 |
| Job Description | P0AEY8 | | Confidence | 1.28% | Date | Wed Jan 25 15:20:32 GMT 2012 |
| Rank | 44 | Aligned Residues | 32 |
| % Identity | 9% | Template | d1jhfa1 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| LexA repressor, N-terminal DNA-binding domain
|
| Resolution | 1.80 |
|
|   |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
50 | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| Query Sequence |   |
V | L | Y | E | F | S | T | Y | I | G | N | D | M | I | Q | P | G | M | L | A | V | V | E | Q | Y | Q | A | . |
G | I | D | W | V |
| Query Conservation |   |
  |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |
|
|   | . |
|   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| Template Conservation |   |
|
|   |
|
|   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|   |   |   |   |
|   |   |
|   |   |
|
|
| Template Sequence |   |
V | F | D | L | I | R | D | H | I | S | Q | T | G | M | P | P | T | R | A | E | I | A | Q | R | L | G | F | R | S | P | N | A | A |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | S | S |
|
|
|  |  |  |  |  |  |  | T | T |
| S | S |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|