Phyre 2 alignment of P45395 with c2v1dA_

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Job Description | P45395
Confidence | 60.02% | Date | Thu Jan 5 12:02:32 GMT 2012
Rank | 227 | Aligned Residues | 33
% Identity | 30% | Template | c2v1dA_
PDB info | PDB header:oxidoreductase/repressor | Chain: A: PDB Molecule:lysine-specific histone demethylase 1; | PDBTitle: structural basis of lsd1-corest selectivity in histone h32 recognition
Resolution | 3.10 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 47 | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | W | C | K | G | K | V | V | V | M | G | M | G | K | S | G | H | I | G | R | K | M | A | A | T | F | A | S | T | G | T | P | S | F | F | V | H
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | K | T | G | K | V | I | I | I | G | S | G | V | S | G | L | A | A | . | . | . | A | R | Q | L | Q | S | F | G | M | D | V | T | L | L | E
Template Known Secondary structure |  | S |  |  | S |  |  |  |  |  |  |  | S |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 276 | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . |  |  |  | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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