BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (210 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0AEL9 Fimbriae Z protein n=80 Tax=Enterobacteriaceae R... 427 e-119 UniRef50_A4TJY3 Two-component response regulator n=27 Tax=Yersin... 202 7e-51 UniRef50_B1T1G9 Two component transcriptional regulator, LuxR fa... 156 4e-37 UniRef50_P0A4H3 Virulence factors putative positive transcriptio... 155 8e-37 UniRef50_UPI00016A3B5F transcriptional regulator FimZ n=1 Tax=Bu... 152 5e-36 UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 ... 151 1e-35 UniRef50_B2JQA9 Two component transcriptional regulator, LuxR fa... 149 7e-35 UniRef50_C4TR02 Histidine kinase n=1 Tax=Yersinia kristensenii A... 147 2e-34 UniRef50_Q46SR4 Two component transcriptional regulator, LuxR fa... 140 2e-32 UniRef50_C9P7K7 Two component transcriptional regulator LuxR fam... 139 7e-32 UniRef50_Q3K943 Putative LuxR family response regulator n=4 Tax=... 138 1e-31 UniRef50_B1FBA4 Two component transcriptional regulator, LuxR fa... 134 1e-30 UniRef50_C9P7J6 Two component transcriptional regulator LuxR fam... 131 1e-29 UniRef50_Q475M9 Regulatory protein, LuxR:Response regulator rece... 129 6e-29 UniRef50_Q1LR81 Two component transcriptional regulator, LuxR fa... 125 7e-28 UniRef50_A4SH97 Two-component system response regulator n=4 Tax=... 125 7e-28 UniRef50_UPI000182725E putative two-component response regulator... 125 8e-28 UniRef50_P0ACZ6 Positive transcription regulator evgA n=68 Tax=E... 125 1e-27 UniRef50_C9QJS3 Putative two-component response regulator n=1 Ta... 124 3e-27 UniRef50_A4SZV7 Two component transcriptional regulator, LuxR fa... 124 3e-27 UniRef50_C7RMN3 Two component transcriptional regulator, LuxR fa... 122 6e-27 UniRef50_C5V5K1 Two component transcriptional regulator, LuxR fa... 120 2e-26 UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR fa... 119 7e-26 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 118 1e-25 UniRef50_C4K7T4 Putative transcriptional regulator, response reg... 118 1e-25 UniRef50_C9PHC4 Putative fimbrial protein Z transcriptional regu... 118 1e-25 UniRef50_C6VXG6 Two component transcriptional regulator, LuxR fa... 117 2e-25 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 117 4e-25 UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacilla... 116 4e-25 UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microsc... 116 4e-25 UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR fa... 116 5e-25 UniRef50_B2JSN3 Two component transcriptional regulator, LuxR fa... 116 6e-25 UniRef50_C9QGW5 Putative two-component response regulator n=1 Ta... 115 8e-25 UniRef50_A8UE45 Two component transcriptional regulator, LuxR fa... 114 2e-24 UniRef50_C4UE15 Positive transcription regulator evgA n=1 Tax=Ye... 114 2e-24 UniRef50_A8GBA0 Two component transcriptional regulator, LuxR fa... 113 4e-24 UniRef50_A3HV51 Two-component response regulator n=1 Tax=Algorip... 113 4e-24 UniRef50_A3U840 DNA-binding response regulator, LuxR family prot... 112 6e-24 UniRef50_A6AYG5 Response regulator VbsA n=11 Tax=Vibrio RepID=A6... 112 6e-24 UniRef50_C1SMK1 Response regulator containing a CheY-like receiv... 112 9e-24 UniRef50_Q88HE8 DNA-binding response regulator, LuxR family n=5 ... 112 9e-24 UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR fa... 112 1e-23 UniRef50_A1VB77 Two component transcriptional regulator, LuxR fa... 111 2e-23 UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR fa... 111 2e-23 UniRef50_C9QEV1 Response regulator VbsA n=2 Tax=Vibrio RepID=C9Q... 111 2e-23 UniRef50_A8LG56 Two component transcriptional regulator, LuxR fa... 111 2e-23 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 110 3e-23 UniRef50_Q07MS7 Two component transcriptional regulator, LuxR fa... 110 3e-23 UniRef50_Q1YTG7 Regulatory protein, LuxR:Response regulator rece... 110 3e-23 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 110 3e-23 UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobact... 110 3e-23 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 110 4e-23 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 110 4e-23 UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92... 109 5e-23 UniRef50_A9DX27 Response regulator n=1 Tax=Kordia algicida OT-1 ... 109 6e-23 UniRef50_A4CPM8 Regulatory protein, LuxR:Response regulator rece... 109 6e-23 UniRef50_C6VZS6 Two component transcriptional regulator, LuxR fa... 109 6e-23 UniRef50_A1TVD4 Two component transcriptional regulator, LuxR fa... 109 7e-23 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 109 8e-23 UniRef50_A0M543 Two-component system response regulator n=3 Tax=... 108 1e-22 UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, ... 108 1e-22 UniRef50_A6CUQ1 Putative fimbrial protein Z, transcriptional reg... 108 1e-22 UniRef50_C1A5E6 NarL family two-component response regulator n=1... 108 1e-22 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 108 1e-22 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 108 1e-22 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 108 1e-22 UniRef50_C7PF69 Two component transcriptional regulator, LuxR fa... 107 2e-22 UniRef50_Q2RYV1 Two-component response regulator n=1 Tax=Salinib... 107 2e-22 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 107 2e-22 UniRef50_A5VJY7 Two component transcriptional regulator, LuxR fa... 107 2e-22 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 107 3e-22 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 107 4e-22 UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1... 107 4e-22 UniRef50_B1ZWL0 Two component transcriptional regulator, LuxR fa... 106 4e-22 UniRef50_C6DD36 Two component transcriptional regulator, LuxR fa... 106 4e-22 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 106 4e-22 UniRef50_B9TGG7 Response regulator uvrY, putative n=1 Tax=Ricinu... 106 5e-22 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 106 5e-22 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 106 5e-22 UniRef50_Q391P2 Two component transcriptional regulator, LuxR fa... 106 6e-22 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 105 8e-22 UniRef50_C6Y109 Response regulator receiver n=1 Tax=Pedobacter h... 105 8e-22 UniRef50_A7N4M7 Putative uncharacterized protein n=11 Tax=Vibrio... 105 8e-22 UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga t... 105 9e-22 UniRef50_Q1QZ85 Two component transcriptional regulator, LuxR fa... 105 1e-21 UniRef50_C0N6H7 Response regulator receiver domain protein n=1 T... 104 2e-21 UniRef50_Q9RLW5 Virulence protein A n=1 Tax=Klebsiella pneumonia... 104 2e-21 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 104 2e-21 UniRef50_B1ZT64 Two component transcriptional regulator, LuxR fa... 104 2e-21 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 104 2e-21 UniRef50_A5WFD3 Two component transcriptional regulator, LuxR fa... 104 2e-21 UniRef50_A1WT06 Two component transcriptional regulator, LuxR fa... 104 2e-21 UniRef50_Q9RLW2 Virulence protein R n=3 Tax=Enterobacteriaceae R... 104 2e-21 UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ... 104 2e-21 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 104 2e-21 UniRef50_B2JQB0 Two component transcriptional regulator, LuxR fa... 104 3e-21 UniRef50_C7LQH4 Two component transcriptional regulator, LuxR fa... 103 3e-21 UniRef50_B4D2X8 Two component transcriptional regulator, LuxR fa... 103 3e-21 UniRef50_Q47DK2 Two component transcriptional regulator, LuxR fa... 103 3e-21 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 103 4e-21 UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl... 103 4e-21 UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR fa... 103 4e-21 UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=... 103 4e-21 UniRef50_B8ET67 Two component transcriptional regulator, LuxR fa... 103 5e-21 UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy... 103 6e-21 UniRef50_A3XI64 DNA-binding response regulator, LuxR family prot... 103 6e-21 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 102 6e-21 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 102 7e-21 UniRef50_A6BYP5 Response regulator receiver domain protein n=1 T... 102 7e-21 UniRef50_C3BGJ6 Two component transcriptional regulator, LuxR n=... 102 7e-21 UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 ... 102 7e-21 UniRef50_Q04VJ6 Receiver component of a two-component response r... 102 8e-21 UniRef50_B9JLI1 Two-component response regulator protein n=1 Tax... 102 8e-21 UniRef50_A3K876 Two-component response regulator n=2 Tax=Rhodoba... 102 8e-21 UniRef50_D2R948 Two component transcriptional regulator, LuxR fa... 102 9e-21 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 102 1e-20 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 102 1e-20 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 102 1e-20 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 102 1e-20 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 102 1e-20 UniRef50_C5UZV9 Two component transcriptional regulator, LuxR fa... 101 1e-20 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 101 1e-20 UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 101 1e-20 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 101 2e-20 UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeoba... 101 2e-20 UniRef50_Q0K3Q8 Response regulator, NarL-family n=1 Tax=Ralstoni... 101 2e-20 UniRef50_D1BCA8 Two component transcriptional regulator, LuxR fa... 100 2e-20 UniRef50_C2FYZ7 Transcriptional regulator n=2 Tax=Sphingobacteri... 100 2e-20 UniRef50_B1Y7F6 Two component transcriptional regulator, LuxR fa... 100 2e-20 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 100 3e-20 UniRef50_C5V4R9 Two component transcriptional regulator, LuxR fa... 100 3e-20 UniRef50_C0EEH8 Putative uncharacterized protein n=1 Tax=Clostri... 100 3e-20 UniRef50_B7AAT6 Two component transcriptional regulator, LuxR fa... 100 3e-20 UniRef50_C4XMF2 NarL family two-component response regulator n=1... 100 3e-20 UniRef50_Q5MJZ1 Nitrate/nitrite regulatory protein n=1 Tax=Methy... 100 3e-20 UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa... 100 3e-20 UniRef50_Q4V0G8 Two-component system regulatory protein n=4 Tax=... 100 4e-20 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 100 4e-20 UniRef50_C6VTD0 Two component transcriptional regulator, LuxR fa... 100 4e-20 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 100 6e-20 UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa... 100 6e-20 UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR fa... 100 6e-20 UniRef50_Q11XC0 Fimbrial Z protein; probable signal transducer n... 99 6e-20 UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa... 99 7e-20 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 99 7e-20 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 99 7e-20 UniRef50_Q0A525 Two component transcriptional regulator, LuxR fa... 99 7e-20 UniRef50_Q6AMC3 Related to two-component system response regulat... 99 8e-20 UniRef50_A6GQJ8 Two component transcriptional regulator, LuxR fa... 99 8e-20 UniRef50_Q3KF50 Putative LuxR family Two Component Transcription... 99 9e-20 UniRef50_C6X598 Two-component response regulator n=1 Tax=Flavoba... 99 9e-20 UniRef50_Q3SG39 Two Component Transcriptional Regulator, LuxR fa... 99 9e-20 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 99 1e-19 UniRef50_B6JD38 Two component transcriptional regulator, LuxR fa... 99 1e-19 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 99 1e-19 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 99 1e-19 UniRef50_C0N6J7 Sigma-70, region 4 family n=1 Tax=Methylophaga t... 99 1e-19 UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=... 99 1e-19 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 99 1e-19 UniRef50_Q023R1 Two component transcriptional regulator, LuxR fa... 99 1e-19 UniRef50_A5FQU5 Two component transcriptional regulator, LuxR fa... 99 1e-19 UniRef50_B4D831 Two component transcriptional regulator, LuxR fa... 99 1e-19 UniRef50_Q13QW9 Two component transcriptional regulator, LuxR fa... 99 1e-19 UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Act... 99 1e-19 UniRef50_C6C961 Two component transcriptional regulator, LuxR fa... 98 1e-19 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 98 1e-19 UniRef50_B8CMA1 Response regulator containing a CheY-like receiv... 98 2e-19 UniRef50_UPI0001C31EFC two component transcriptional regulator, ... 98 2e-19 UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR fa... 98 2e-19 UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi... 98 2e-19 UniRef50_B1ZP37 Two component transcriptional regulator, LuxR fa... 98 2e-19 UniRef50_C6X491 DNA-binding response regulator, LuxR family n=1 ... 98 2e-19 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 98 2e-19 UniRef50_Q1D626 DNA-binding response regulator, LuxR family n=2 ... 98 2e-19 UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrh... 97 2e-19 UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=P... 97 3e-19 UniRef50_C8QGG5 Two component transcriptional regulator, LuxR fa... 97 3e-19 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 97 3e-19 UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding... 97 3e-19 UniRef50_C6WV69 Two component transcriptional regulator, LuxR fa... 97 3e-19 UniRef50_C6X139 DNA-binding response regulator, LuxR family n=1 ... 97 3e-19 UniRef50_A5FMH2 Two component transcriptional regulator, LuxR fa... 97 4e-19 UniRef50_Q1IT25 Two component transcriptional regulator, LuxR fa... 97 4e-19 UniRef50_C7I0E4 Two component transcriptional regulator, LuxR fa... 97 4e-19 UniRef50_C5VFN2 Two component transcriptional regulator, LuxR fa... 97 4e-19 UniRef50_C4XSZ8 NarL family two-component response regulator n=2... 97 4e-19 UniRef50_B2G7N1 Two component response regulator n=7 Tax=Lactoba... 97 4e-19 UniRef50_A1ATT6 Two component transcriptional regulator, LuxR fa... 97 4e-19 UniRef50_B1Y741 Two component transcriptional regulator, LuxR fa... 97 4e-19 UniRef50_B1ZI39 Two component transcriptional regulator, LuxR fa... 97 5e-19 UniRef50_B7DQP6 Two component transcriptional regulator, LuxR fa... 97 5e-19 UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium... 97 5e-19 UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR fa... 97 5e-19 UniRef50_B5JGA7 Transcriptional regulator, LuxR family protein n... 97 5e-19 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 97 5e-19 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 96 6e-19 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 96 6e-19 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 96 6e-19 UniRef50_B1ZN14 Two component transcriptional regulator, LuxR fa... 96 6e-19 UniRef50_Q2W107 Response regulator containing a CheY-like receiv... 96 7e-19 UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Synt... 96 7e-19 UniRef50_A4JJ97 Two component transcriptional regulator, LuxR fa... 96 7e-19 UniRef50_B2STP5 Transcriptional regulator LuxR/uhpA family n=22 ... 96 7e-19 UniRef50_B3E9K5 Two component transcriptional regulator, LuxR fa... 96 7e-19 UniRef50_Q0HL36 Two component transcriptional regulator, LuxR fa... 96 7e-19 UniRef50_C1DSJ1 Two-component response regulator, LuxR family n=... 96 8e-19 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 96 8e-19 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 96 8e-19 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 96 8e-19 UniRef50_A1VT42 Two component transcriptional regulator, LuxR fa... 96 9e-19 UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ecto... 96 9e-19 UniRef50_D1Y4N4 Two component transcriptional regulator, LuxR fa... 96 9e-19 UniRef50_A9VYF8 Response regulator receiver n=5 Tax=Methylobacte... 96 9e-19 UniRef50_B2KBW2 Two component transcriptional regulator, LuxR fa... 96 9e-19 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 96 1e-18 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 96 1e-18 UniRef50_D2QF32 Two component transcriptional regulator, LuxR fa... 96 1e-18 UniRef50_Q027R2 Two component transcriptional regulator, LuxR fa... 96 1e-18 UniRef50_Q0EZ33 Regulatory protein, LuxR:Response regulator rece... 96 1e-18 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 96 1e-18 UniRef50_C6XAP6 Two component transcriptional regulator, LuxR fa... 95 1e-18 UniRef50_A6T252 DNA-binding response regulator, LuxR family n=1 ... 95 1e-18 UniRef50_C1ZGK9 Response regulator containing a CheY-like receiv... 95 1e-18 UniRef50_C6W5Q8 Two component transcriptional regulator, LuxR fa... 95 1e-18 UniRef50_C6E2Z2 Two component transcriptional regulator, LuxR fa... 95 1e-18 UniRef50_B6J0B9 Response regulator n=18 Tax=Coxiella burnetii Re... 95 1e-18 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 95 2e-18 UniRef50_UPI00017443C2 hypothetical protein VspiD_13430 n=2 Tax=... 95 2e-18 UniRef50_B0TSG4 Two component transcriptional regulator, LuxR fa... 95 2e-18 UniRef50_Q1H353 Two component transcriptional regulator, LuxR fa... 95 2e-18 UniRef50_Q9JMV7 Two-component response regulator n=2 Tax=Bradyrh... 95 2e-18 UniRef50_Q3SF76 Two Component Transcriptional Regulator, LuxR fa... 95 2e-18 UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC... 94 2e-18 UniRef50_B1ZU68 Two component transcriptional regulator, LuxR fa... 94 2e-18 UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methyli... 94 2e-18 UniRef50_B2SU06 Two-component system regulatory protein n=73 Tax... 94 2e-18 UniRef50_C9PHC7 Putative two-component response regulator n=1 Ta... 94 2e-18 UniRef50_Q3JL34 DNA-binding response regulator n=30 Tax=pseudoma... 94 2e-18 UniRef50_UPI00017443BD response regulator with a HTH DNA-binding... 94 2e-18 UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax... 94 2e-18 UniRef50_C4KAM8 Two component transcriptional regulator, LuxR fa... 94 3e-18 UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opit... 94 3e-18 UniRef50_Q1MYT3 Response regulator containing a CheY-like receiv... 94 3e-18 UniRef50_A6W0B9 Two component transcriptional regulator, LuxR fa... 94 3e-18 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 94 3e-18 UniRef50_A5FIE9 Two component transcriptional regulator, LuxR fa... 94 4e-18 UniRef50_A1K960 Probable transcriptional regulator, LuxR family ... 94 4e-18 UniRef50_B1XRB7 Response regulator receiver, LuxR domain n=14 Ta... 94 4e-18 UniRef50_C0YMY4 Response regulator n=2 Tax=Chryseobacterium gleu... 94 4e-18 UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobac... 94 4e-18 >UniRef50_P0AEL9 Fimbriae Z protein n=80 Tax=Enterobacteriaceae RepID=FIMZ_ECO57 Length = 210 Score = 427 bits (1099), Expect = e-119, Method: Compositional matrix adjust. Identities = 210/210 (100%), Positives = 210/210 (100%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP Sbjct: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI Sbjct: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT Sbjct: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 VSAHKSNIYGKLGLHSIVELIDYAKLYELI Sbjct: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 >UniRef50_A4TJY3 Two-component response regulator n=27 Tax=Yersinia RepID=A4TJY3_YERPP Length = 210 Score = 202 bits (514), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 100/207 (48%), Positives = 145/207 (70%), Gaps = 1/207 (0%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 SV+I+D HP IR++I LL ++ E + ++ D ++ L+ PVDL+I+DI+LP DG Sbjct: 4 SVMIVDDHPAIRVAIHALLSQSKEFSTISESVDGSEALEKLKNNPVDLVIIDIELPNFDG 63 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 F+ LK+++Q T K LFLS+K+E +A RA+QAGANGF+SK D ++I A Q +L GY Sbjct: 64 FSLLKKLQQRGFTGKSLFLSAKNEQVFAVRALQAGANGFISKNKDISEILFAAQNVLRGY 123 Query: 125 TFFPSETLNYIKSNKCSTNS-STVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 +FFPSETL + S + + +LS RE+ +LRYLV+GLSNK+IAD++ +SNKTVS Sbjct: 124 SFFPSETLTQLAGQPSSHDPVNRARLLSEREINVLRYLVNGLSNKQIADEMFISNKTVST 183 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 +K+ I KLGL S++EL DYA + L+ Sbjct: 184 YKTRILTKLGLSSVIELADYAHTHNLV 210 >UniRef50_B1T1G9 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T1G9_9BURK Length = 204 Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 83/205 (40%), Positives = 125/205 (60%), Gaps = 3/205 (1%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V+I+D HP +++++ +L++N L++V D + R DL+I+DIDL G DG Sbjct: 3 VVIVDDHPTVQLALTSILERNVNLKVVGTASDGGEGLRLCRELKPDLLIVDIDLDGMDGI 62 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 ++R++ +TVK+L S S +A R AGANG+V+K D + A +L+G+ Sbjct: 63 DLIQRVRIKDATVKILVFSGYSAELFALRCHAAGANGYVNKSEDVTHVLSAANAVLAGFH 122 Query: 126 FFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHK 185 FP + +N + S S + +LS RE+T+LRYL GLSNKEI D L LSNKT+S HK Sbjct: 123 CFPLD-INAMASG--SGPHAAFAMLSERELTVLRYLAKGLSNKEIGDSLSLSNKTISTHK 179 Query: 186 SNIYGKLGLHSIVELIDYAKLYELI 210 +NI KLG ++V+L +AK + LI Sbjct: 180 ANILAKLGFTNVVDLAAFAKAHHLI 204 >UniRef50_P0A4H3 Virulence factors putative positive transcription regulator bvgA n=56 Tax=Proteobacteria RepID=BVGA_BORBR Length = 209 Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 74/201 (36%), Positives = 134/201 (66%), Gaps = 2/201 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V+I+D HP++R ++ VL++K +++ +TD+ + R + +L+++DI +P DG Sbjct: 5 VLIIDDHPVLRFAVRVLMEKEG-FEVIGETDNGIDGLKIAREKIPNLVVLDIGIPKLDGL 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 + R++ + ++VL L+ + +A R + +GA GFV K + +++ +A + +++GYT Sbjct: 64 EVIARLQSLGLPLRVLVLTGQPPSLFARRCLNSGAAGFVCKHENLHEVINAAKAVMAGYT 123 Query: 126 FFPSETLNYIK-SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 +FPS TL+ ++ + ++S+ ++VLSNRE+T+L+ L G+SNK+IAD + LSNKTVS + Sbjct: 124 YFPSTTLSEMRMGDNAKSDSTLISVLSNRELTVLQLLAQGMSNKDIADSMFLSNKTVSTY 183 Query: 185 KSNIYGKLGLHSIVELIDYAK 205 K+ + KL S+VELID AK Sbjct: 184 KTRLLQKLNATSLVELIDLAK 204 >UniRef50_UPI00016A3B5F transcriptional regulator FimZ n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A3B5F Length = 169 Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 77/166 (46%), Positives = 111/166 (66%) Query: 45 LRTRPVDLIIMDIDLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFV 104 LR P++L I+DI++PG DG LKRI+ +VL S+ E Y+ RA +AGANGF+ Sbjct: 4 LREHPIELAILDIEIPGGDGLRLLKRIRAEGLKTRVLIFSAMDERIYSVRASKAGANGFL 63 Query: 105 SKCNDQNDIFHAVQMILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSG 164 SK ND I AV+ ILSGY FFP+E ++ + ++ +++ L++RE+T+LR L G Sbjct: 64 SKRNDIAQILIAVKTILSGYLFFPAEAVSALYHDRTRQSANRTGGLTDRELTVLRGLARG 123 Query: 165 LSNKEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 SN++I + L +SNKTVS +KSNI+ KLG+ S+V L DYA+ LI Sbjct: 124 SSNRQIGEDLCISNKTVSTYKSNIFEKLGVSSVVGLADYARRNGLI 169 >UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KCH2_PSEF5 Length = 208 Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 83/206 (40%), Positives = 126/206 (61%), Gaps = 1/206 (0%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 SV+I+D HP++ +I L+ IV +T D ++ + + D++I+D+ L DG Sbjct: 4 SVLIVDDHPVVCEAIRKTLESQG-YTIVGETADGISALNMILSLRPDIVILDVSLEKMDG 62 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 T LKRI Q V+VL +++S YA R +QAGA+GFVSK + AV I+ GY Sbjct: 63 LTVLKRIAQANLDVRVLVFTAQSVDTYAMRCLQAGASGFVSKNEPLTKLLKAVDTIVEGY 122 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 FFP +++ + + +S + L+NRE+ +L+ L GL+N EIA+KL LSNKTVS H Sbjct: 123 VFFPKKSMPFSDGGRGKHSSDVLAALTNRELEVLKLLAEGLTNLEIAEKLHLSNKTVSGH 182 Query: 185 KSNIYGKLGLHSIVELIDYAKLYELI 210 K NI KLG+ S+V+L++ A+ EL+ Sbjct: 183 KINILSKLGVTSVVDLVNIARQNELV 208 >UniRef50_B2JQA9 Two component transcriptional regulator, LuxR family n=4 Tax=Burkholderia RepID=B2JQA9_BURP8 Length = 209 Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 79/205 (38%), Positives = 131/205 (63%), Gaps = 7/205 (3%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 ++I+D HP+IR +I + + +SELQIV ++ D + + + DL ++D+DLP DG Sbjct: 11 IVIVDDHPMIRGAIVSVFRSDSELQIVGESGDGEEGLRMVLSLKPDLAVLDLDLPSLDGL 70 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 + ++RI+ ++++L LS+K + + QAGANG+VSK + ++ A + +L G+ Sbjct: 71 SMIRRIRAQDDSMRILVLSAKPDHVMSLHTQQAGANGYVSKGRELTEMLTAARTVLLGFD 130 Query: 126 FFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHK 185 FP+ N +NK + + VLS RE+ +L+YL G+SNKEIA +L LS+KTVS +K Sbjct: 131 CFPA---NAPHANK----AGGLDVLSPREMEVLQYLARGVSNKEIASRLFLSDKTVSTYK 183 Query: 186 SNIYGKLGLHSIVELIDYAKLYELI 210 + + KLGL S+ LI++A L++LI Sbjct: 184 TRLCEKLGLSSLAALIEFATLHKLI 208 >UniRef50_C4TR02 Histidine kinase n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4TR02_YERKR Length = 477 Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 82/196 (41%), Positives = 120/196 (61%), Gaps = 1/196 (0%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 S +I+D HP IR +I LL + +E + + D + L+ + L+I+DI+LP DG Sbjct: 4 SAMIVDDHPAIRAAIRALLSQRNEFSTIYELSDGSEAFEILKNNTIVLVIIDIELPNFDG 63 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 F+ LK+++Q T K LFLS+K++ +A RA+QAGANG +SK D ++I AVQ IL GY Sbjct: 64 FSLLKKLQQRGFTGKSLFLSAKNDQSFAVRALQAGANGLISKNKDISEILFAVQRILRGY 123 Query: 125 TFFPSETLNYIKSNKCSTNSSTVT-VLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 +FFPSETL + T LS + YL +GL NK+I D++ +SNKTVS Sbjct: 124 SFFPSETLTQLAGQPLRHELINRTHFLSAWGINDFGYLTNGLVNKQITDEICISNKTVST 183 Query: 184 HKSNIYGKLGLHSIVE 199 +K +I KL L+S++ Sbjct: 184 YKMHILTKLRLNSVIR 199 >UniRef50_Q46SR4 Two component transcriptional regulator, LuxR family n=14 Tax=Burkholderiales RepID=Q46SR4_RALEJ Length = 232 Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 70/208 (33%), Positives = 127/208 (61%), Gaps = 7/208 (3%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +++I+D HP +R+ ++ L + + VL+ D+ + ++ +R D++I+D+D+P + Sbjct: 27 ATILIVDDHPAVRVVLKTHLSQVLGVTHVLEADNGQAAVEIVRQYAPDVVILDLDIPRIN 86 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + R+K IQ V++L +S + + +A RA QAGANG+VSK + +I V+ +L+G Sbjct: 87 GLDVIPRLKAIQPGVRILVISGQDQNTFAPRARQAGANGYVSKTQELPEIVRCVESVLAG 146 Query: 124 YTFFPSETLNYIKSNKCSTNSST--VTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 Y+ P + + T + LS++E+ I++ L G+SNK+I + L +SNKTV Sbjct: 147 YSVMPD-----VDGGRADGVDETRRLGSLSDKELVIMQMLAKGMSNKQIGEVLFISNKTV 201 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYEL 209 S HK+ I KLG S+V++ID+A+ + + Sbjct: 202 STHKTRIMEKLGARSLVDVIDFARRHHI 229 >UniRef50_C9P7K7 Two component transcriptional regulator LuxR family n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P7K7_VIBME Length = 209 Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 130/200 (65%), Gaps = 5/200 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M +VII+D HP+I M++ LL ++ ++V TD+ ++ + + +++++DI +P Sbjct: 2 MNKNTVIIVDDHPVIVMALSALLTQHG-YEVVATTDNGVDALNLTKLKKPNILLLDIGIP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 DG +KR++ I + KVL L+++ FYA RA+ +GA+GF+SK D + + A++ I Sbjct: 61 MLDGLEVIKRLENIDNPPKVLVLTAQPSNFYANRALLSGASGFLSKNADISYVIEALKAI 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 SGY +FP ++LN+ + + +++LS RE+T+ YLVSG+ NKEIA +++LS+KT Sbjct: 121 SSGYKYFP-DSLNF---KQQIEKDNDLSILSPRELTVFNYLVSGMPNKEIAKEMILSSKT 176 Query: 181 VSAHKSNIYGKLGLHSIVEL 200 +S +K+ I KL +I+EL Sbjct: 177 ISTYKNRILEKLNAKNIIEL 196 >UniRef50_Q3K943 Putative LuxR family response regulator n=4 Tax=Gammaproteobacteria RepID=Q3K943_PSEPF Length = 208 Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 74/207 (35%), Positives = 122/207 (58%), Gaps = 2/207 (0%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 SV I+D HP+IR+++ +LL+ ++V +TD+ + +R DLII+DI +P DG Sbjct: 3 SVFIVDDHPVIRLAVRMLLEHEG-YKVVGETDNGVDAMQMVRECMPDLIILDISIPKLDG 61 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 L R + S K L L+++ + R +Q+GA+G+V K D +++ A++ +LSGY Sbjct: 62 LEVLARFNAMSSPFKTLVLTAQCPTLFGIRCMQSGASGYVCKQEDLSELVSAIKAVLSGY 121 Query: 125 TFFPSETLNYIKSNKCS-TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 +FPS+ LN ++ + +++RE+ +L+ G +NKEIA + LSNKTVS Sbjct: 122 NYFPSQALNPVRHDDVRYAELELFKSVNDRELMVLQLFAQGRTNKEIAKGMFLSNKTVST 181 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 +K + KL S+VELI+ AK L+ Sbjct: 182 YKKRLMQKLKAKSLVELIEMAKRNALV 208 >UniRef50_B1FBA4 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FBA4_9BURK Length = 204 Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 117/200 (58%), Gaps = 5/200 (2%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 ++++D HPI +++ LLQ+ + V D + +T DL+I+D++LP G Sbjct: 4 ILLVDDHPIYLIALSTLLQQERIAENVAVAKDGESAWELYKTEQPDLMIVDLNLPTLSGV 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 F+KR++ S V++L SS AG+ GANG+V K D + + +AV+ LSG+ Sbjct: 64 DFVKRVRVSDSHVRILVFSSARTEVMAGKIRAIGANGYVQKTEDISQMLNAVRATLSGFD 123 Query: 126 FFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHK 185 FPS + S + LS RE+T+L YLV G SN+EIAD L +S+KTVS HK Sbjct: 124 CFPSAA-----GDPLSGSGRIAAALSPREITVLSYLVKGHSNQEIADLLHVSHKTVSTHK 178 Query: 186 SNIYGKLGLHSIVELIDYAK 205 ++I+ K G+ +IV+L ++A+ Sbjct: 179 AHIFQKTGITNIVDLAEFAR 198 >UniRef50_C9P7J6 Two component transcriptional regulator LuxR family n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P7J6_VIBME Length = 202 Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 76/208 (36%), Positives = 122/208 (58%), Gaps = 17/208 (8%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 T++I++D HPI+ M+ +V+L+KN+ +V + + I ++ ++++DI +P D Sbjct: 2 TNIILVDDHPIVLMAAKVILEKNN-FSVVAEAKNGVEAIKKIKEYQPHIVVIDISIPLID 60 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + ++R + T K L L+S+ + +QAGA G++SK ++ A++ I +G Sbjct: 61 GISVIERCTAMGITTKFLVLTSQPNSHFVSLCMQAGAYGYLSKETGLEELVTAMKAIAAG 120 Query: 124 YTFFPSETLNYIKSNKCSTNSSTV------TVLSNREVTILRYLVSGLSNKEIADKLLLS 177 Y FFP C T+ STV ++LS RE+ + YLVSGLSN EIA+K+L+S Sbjct: 121 YKFFPD----------CVTHLSTVQDQNDLSILSAREIVVFNYLVSGLSNNEIAEKMLIS 170 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAK 205 NKTVS +K I KL +IV+LI AK Sbjct: 171 NKTVSTYKKRIMDKLNAKNIVDLISIAK 198 >UniRef50_Q475M9 Regulatory protein, LuxR:Response regulator receiver n=3 Tax=Cupriavidus RepID=Q475M9_RALEJ Length = 212 Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 115/205 (56%), Gaps = 1/205 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 +I+D P+ L + L D+ R +R R L+++++D G G Sbjct: 9 ALIVDARPVPPGEASWQLAHALGARRTLLADNVRQAQQMVRERQPGLVVVELDALGQAGI 68 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 T +KR+ V++L LS +A++AGA+GFV + D ++ A + ++SGY Sbjct: 69 TLIKRLAARHPDVRLLVLSDSDATMAPVQALRAGAHGFVPRQRDLAEMVQAARGVMSGYL 128 Query: 126 FFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHK 185 FP+ TL+ + + + + + L+ RE+T+L+YL G SNK I +LL+S+KTVS HK Sbjct: 129 VFPTHTLDAARKLRLPS-AGKLARLTARELTVLQYLARGHSNKTIGARLLISSKTVSTHK 187 Query: 186 SNIYGKLGLHSIVELIDYAKLYELI 210 +NI KL + S+VE++DYA+ + L+ Sbjct: 188 TNIMCKLNVGSVVEMVDYARQHRLL 212 >UniRef50_Q1LR81 Two component transcriptional regulator, LuxR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LR81_RALME Length = 207 Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 71/207 (34%), Positives = 120/207 (57%), Gaps = 4/207 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRP-VDLIIMDIDLPGT 62 ++ +++D HP +R + L ++ + V ++ LRTR DL+++D+DL Sbjct: 2 SNALVIDNHPGVRAAASAALMESMGFEEVRLATTATEALEELRTRQRPDLVMVDLDLGDL 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G ++ + +VL LS+ S A RA+ +GA+G+V K N I HAV+ ++S Sbjct: 62 PGDAVVEEVVSHHPATRVLVLSAASGA--AERALLSGAHGYVDKGNGIGGIEHAVRAVMS 119 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 GY FP L I+ + + + VLS RE+T++R+L +G SNK I+ L +SNKTVS Sbjct: 120 GYAAFPLALLTTIR-RAANAPADPILVLSRRELTVMRFLAAGHSNKAISVVLGISNKTVS 178 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYEL 209 +HK++I KLG S+++L ++A+ + L Sbjct: 179 SHKASIMTKLGFRSLIDLAEFARRHHL 205 >UniRef50_A4SH97 Two-component system response regulator n=4 Tax=Aeromonas RepID=A4SH97_AERS4 Length = 207 Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 118/206 (57%), Gaps = 1/206 (0%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 +V+I+D HP IRM++++LL I + D+ + ++ +++++DI +P DG Sbjct: 3 TVLIVDDHPAIRMAVKILLLAEG-FHICGEVDNGIDALQIVKASTPNIVVLDIGIPKLDG 61 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 + RIK+ S ++ LS++ R QAGANGF+SK +D + A++ L G Sbjct: 62 IDVINRIKKSNSQSLIVVLSAQDGNHIMSRCFQAGANGFISKMDDLMLLSSAIKACLDGK 121 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 +FP E ++ + + LS+RE+ + L G SNKEIA+ +LLS KT+S + Sbjct: 122 RYFPDEIISEGDQASNINSDDALLSLSDREMRVFLSLCKGCSNKEIANNMLLSEKTISTY 181 Query: 185 KSNIYGKLGLHSIVELIDYAKLYELI 210 KS + KL ++++VELID AK Y +I Sbjct: 182 KSRVMRKLQVNNMVELIDLAKRYMVI 207 >UniRef50_UPI000182725E putative two-component response regulator n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI000182725E Length = 211 Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 72/199 (36%), Positives = 117/199 (58%), Gaps = 4/199 (2%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 S++++D HP I +++VLL+K+ ++ + T + ++ + RP DL+I+D++L DG Sbjct: 3 SILLVDDHPAICFALKVLLEKHGDMTVSTSTGENLLS-QLHQQRP-DLLILDLELKHADG 60 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 L RIKQ + +L +S+S YA R + AGA GF++K ++ ++I++GY Sbjct: 61 LDLLPRIKQHLPELNILVFTSQSAGIYALRTLHAGAQGFINKNMPLENVEPLCRLIMAGY 120 Query: 125 TFFPSETLNYIKS--NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 FP TL S K + S + S+RE+ +L YL G SNKEIAD L+LSNKT+S Sbjct: 121 QCFPEGTLFKAASVNEKSDASESLSSRFSDREIAVLNYLKQGKSNKEIADLLMLSNKTIS 180 Query: 183 AHKSNIYGKLGLHSIVELI 201 +K+ + K G + +LI Sbjct: 181 TYKTRMLQKCGCDDLNQLI 199 >UniRef50_P0ACZ6 Positive transcription regulator evgA n=68 Tax=Enterobacteriaceae RepID=EVGA_ECO57 Length = 204 Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 123/201 (61%), Gaps = 3/201 (1%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 + II+D HP+ +I LL KN +++I+ + + + + T D++I+D+D+PG +G Sbjct: 2 NAIIIDDHPLAIAAIRNLLIKN-DIEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNG 60 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 L+ +++ Q + ++ +S+K++ FY AGANGFVSK N+I A++ +GY Sbjct: 61 IQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSKKEGMNNIIAAIEAAKNGY 120 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 +FP ++ S +++ + LS +E++++RY++ G N +IA+K+ +SNKTVS + Sbjct: 121 CYFPFSLNRFVGS--LTSDQQKLDSLSKQEISVMRYILDGKDNNDIAEKMFISNKTVSTY 178 Query: 185 KSNIYGKLGLHSIVELIDYAK 205 KS + KL S+++L +A+ Sbjct: 179 KSRLMEKLECKSLMDLYTFAQ 199 >UniRef50_C9QJS3 Putative two-component response regulator n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QJS3_VIBOR Length = 210 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 117/201 (58%), Gaps = 6/201 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MK ++++ D HP++ ++I+ L S + + +R +D ++ + ++ +I+DI+L Sbjct: 11 MKKFNILVFDDHPLVGVAIKATLSLMSCVDSISSVYSFRSALDVIKNKNINFVILDINLS 70 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 DG+ F +RIK KVLF S++ Y+ A ++GA+G+V K Q + AV+ I Sbjct: 71 DGDGYDFYRRIKSHGYQGKVLFYSAEESSLYSKLAFKSGADGYVCKSEHQEILRDAVEGI 130 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 +GYTFF KS+K + LSNRE ++ +L++G +NK+I L +S+KT Sbjct: 131 SNGYTFFK------FKSDKSGYENEEQVTLSNREAMVMSHLLNGKTNKDIGQLLKISDKT 184 Query: 181 VSAHKSNIYGKLGLHSIVELI 201 VS +K ++ K ++++VELI Sbjct: 185 VSTYKKRLFDKYSVNNLVELI 205 >UniRef50_A4SZV7 Two component transcriptional regulator, LuxR family n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SZV7_POLSQ Length = 207 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 121/205 (59%), Gaps = 4/205 (1%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V+++D HP + M+++ +LQ +I + + + ++ +++I+D+D+P TDGF Sbjct: 5 VMLVDDHPAMLMALKSMLQDQLLFEIAGQAQNGEECLRSIKEVNPNMVILDLDMPKTDGF 64 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 ++RI + +++L LSS E Y GR GA+GFV+K + I A I GY Sbjct: 65 DVIRRIGLMYPDIRMLVLSSLDEAVYGGRVRSLGAHGFVNKTAGADVILAACVAISQGYN 124 Query: 126 FFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHK 185 FF N T++ + ++S+RE+ +++YL G +N++I+D L +SNKTV+ +K Sbjct: 125 FFTHGK----NGNSSLTDNDKLALISDRELQVMKYLGKGNTNQQISDLLHISNKTVATYK 180 Query: 186 SNIYGKLGLHSIVELIDYAKLYELI 210 + ++ KLG+++I +LI + ++ +I Sbjct: 181 TRVFDKLGINNIADLILFCRINNII 205 >UniRef50_C7RMN3 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMN3_9PROT Length = 213 Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 65/199 (32%), Positives = 110/199 (55%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 ++++D H ++R + +LL + ++++V + ++ I +R D+ ++DI LPG G Sbjct: 8 ILLVDDHAVVRGGLRLLLAQTDDMEVVSEAENAEQAISMIRQNEFDVALVDIGLPGKGGL 67 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 LK+IK + + VL LS +E YA RA++AGA+G+++K + + A++ + G Sbjct: 68 DLLKQIKAERPRIAVLMLSMYAEEVYAVRALKAGASGYLTKNSPPGTLLAAIRKVAGGGR 127 Query: 126 FFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHK 185 L + S LS+RE+ +LR L SG S +IA+ L LS KTV+ ++ Sbjct: 128 HVSPALLEQLAVEVGQGRKSASDALSDREIEVLRRLASGESLTQIAEALHLSPKTVTTYR 187 Query: 186 SNIYGKLGLHSIVELIDYA 204 + I K GLHS EL YA Sbjct: 188 ARIVEKTGLHSNAELTRYA 206 >UniRef50_C5V5K1 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K1_9PROT Length = 211 Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 123/207 (59%), Gaps = 5/207 (2%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 +I+ D H ++R + L + +++V + + + L+ VDL+++D+D+PG +G Sbjct: 5 LIVTDDHELVRAGLLQLFEGAPGIEVVGEAVNGEELMRKLQATQVDLVLLDLDMPGENGA 64 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAV-QMILSGY 124 ++RI++ + +L LS+ E RA+QAGA+G++ K + A+ +++ +G Sbjct: 65 NLIERIRRHYPDLLILILSAHDEIKVVSRAVQAGASGYICKDCSPKTLLEAIHKVVATGK 124 Query: 125 TFFP--SETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 P +E L Y + + NS + +LS+RE I R LV GLSN +I+ +L +S++TVS Sbjct: 125 YLSPLMAEELAYTSAIPQANNS--LALLSSREQEIFRLLVEGLSNDDISRQLFISDRTVS 182 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYEL 209 AHK N+ KLGL ++VEL+ Y+ ++L Sbjct: 183 AHKINLLNKLGLKNVVELVHYSIQHQL 209 >UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z3_LEPCP Length = 235 Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 116/206 (56%), Gaps = 3/206 (1%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 ++I+D H I+R ++ +L+ +V + ++ +R +P+DL I+D+ +PG +G Sbjct: 15 ILIVDDHVIVREGLQRILEATGAGWVVAEASSGFQALEVMRHQPIDLAIVDLSMPGMNGL 74 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 +KRI+ V+VL LS +E YA RA +AGANG+V+K ++ +AV+ + +G Sbjct: 75 DLIKRIRTEFPRVRVLVLSMHAEEQYAMRAFKAGANGYVTKDGASAELVNAVRKVATGGA 134 Query: 126 FFPSETLNYI--KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + + + + N +T LS+RE+ +LR +V+G +IA+ L LS KTVS Sbjct: 135 YVTASLAERVVLQLNGATTAPGHAQ-LSDRELEVLRRIVAGERITDIAEALHLSVKTVST 193 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYEL 209 HKS I KL L ++ LI Y + L Sbjct: 194 HKSRIQEKLQLPTMAALIRYGMAHGL 219 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 66/195 (33%), Positives = 109/195 (55%), Gaps = 2/195 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MKPT V++ D H ++R I LL+ ++++V + D T+ +R DL+++D+++P Sbjct: 1 MKPTKVLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G T +K+IK+I +KVL L+ E Y I++GA G++ K ++ A+ + Sbjct: 61 RMGGITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAIDKV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 + G FP T N ++ + V LS+RE +L L G+SNK+IA +L +S KT Sbjct: 121 IKGDKVFPRSTENEVR--EVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEKT 178 Query: 181 VSAHKSNIYGKLGLH 195 V H SNI KL ++ Sbjct: 179 VKNHVSNILRKLSVN 193 >UniRef50_C4K7T4 Putative transcriptional regulator, response regulator receiver and GerE domains n=2 Tax=Enterobacteriaceae RepID=C4K7T4_HAMD5 Length = 207 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 66/206 (32%), Positives = 124/206 (60%), Gaps = 1/206 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 S++I+D HP+ R++I +LL+K + +V + DD + ++ DLI++DID+ + Sbjct: 2 ASILIVDDHPVARLAIRMLLEKEN-YTVVGEVDDGFKALQQVKQFNPDLILVDIDILSLN 60 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + R++ + +L L+ K Y R QAGA+GF+SK N+ +++ +A++ I SG Sbjct: 61 GIDLVLRLRHQEYKGGILVLTGKDNAHYITRCKQAGADGFISKRNNLSELKNALRSIESG 120 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 Y+FFP + + S S + + LS +E+ +L L G+ +IA+++ +S+KTVS Sbjct: 121 YSFFPLQRAEFSDSKPFSDETDRINQLSTKELQVLSCLSKGMKILDIAEQMKISHKTVST 180 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYEL 209 +KS + KL L+++V+L +++ + L Sbjct: 181 YKSRMMYKLQLNNMVDLYHFSQRHNL 206 >UniRef50_C9PHC4 Putative fimbrial protein Z transcriptional regulator n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PHC4_VIBFU Length = 183 Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 71/186 (38%), Positives = 112/186 (60%), Gaps = 12/186 (6%) Query: 17 MSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFTFLKRIKQIQS 76 M+++ +L +N VL D + + LR VD +I+D++L DGF L+R+K Sbjct: 1 MAMKQILDRNPRFTEVLVESDPFVGVKKLRQTQVDFLILDVNLVKLDGFEVLRRLKLQGF 60 Query: 77 TVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTFFPSETLNYIK 136 T K LF+S+ Y+ A++ GA+G++SK D + + AV+ IL+GY+FF Sbjct: 61 TGKTLFVSASESRLYSETAMRVGADGYISKSEDLSILQDAVECILNGYSFF--------- 111 Query: 137 SNKCSTNSSTVTV-LSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHKSNIYGKLGLH 195 K +T++ ++ V LS +E+ + R+LV G SNKEIA+ L LS KT+S +KS I K ++ Sbjct: 112 --KVTTDTKSMDVELSKQELAVFRFLVDGKSNKEIAEILSLSPKTISTYKSRILDKYQVN 169 Query: 196 SIVELI 201 SIVEL+ Sbjct: 170 SIVELM 175 >UniRef50_C6VXG6 Two component transcriptional regulator, LuxR family n=2 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VXG6_DYAFD Length = 220 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 124/207 (59%), Gaps = 3/207 (1%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 +V++++ H I+RM + +L++ V++ + T+ +L++R DL+I+DI +PG + Sbjct: 3 TVLLVEDHSIVRMGVRLLIEDFLPSVTVVEAATFSETLKHLQSRFFDLVILDIKIPGGEA 62 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 F + +I+ IQ+ VK+L SS+ E YA ++AGANG++ K ++ A+ +L+G Sbjct: 63 FNMIGKIRDIQNKVKILVFSSQDEELYAIHYVKAGANGYLPKDTSNEELEKAITSVLAGG 122 Query: 125 TFFPSETLNYIKSN---KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 T+ + + + +N + + S + +LSNRE+ I+ L++G K+IA L + TV Sbjct: 123 TYISNVIQDQLVNNTLLERESKESPLEILSNRELEIMDMLLTGKWTKDIALDLNIKESTV 182 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYE 208 S +K+ I+ KL + +I+EL ++Y+ Sbjct: 183 STYKARIFEKLEVTNILELFKKVEIYK 209 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 73/208 (35%), Positives = 114/208 (54%), Gaps = 2/208 (0%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P SV I+D HP+++ ++ L ++ IV TDD ++ D+I+MDI +P Sbjct: 8 PVSVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKAIELKPDVILMDISMPTM 67 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +G + I + KVL LS S + AIQAGA G++ K +I++A++ + + Sbjct: 68 NGIDATEIITEQLPETKVLILSMHSNPEFVKSAIQAGAVGYLLKDTTSEEIYYAIKAVAN 127 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G T F S + N +TN S L+ RE +L YL G ++KEIA L +S +TV Sbjct: 128 GKTHFSSSIAKLLIDNPVNTNES--EKLTTREQVVLSYLAKGKTSKEIAKILNISFRTVE 185 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 AH+ N+ KLG+HS+ +LI YA + +I Sbjct: 186 AHRRNMKTKLGIHSLAKLISYAVKHGII 213 >UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacillales RepID=C0ZDE8_BREBN Length = 214 Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 73/201 (36%), Positives = 117/201 (58%), Gaps = 2/201 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP-GTDG 64 V+++D H +IR + VLL+ S+++IV ++ I D+++MD+ LP G DG Sbjct: 4 VLLVDDHTMIRKGLRVLLESYSQIKIVGESHTGNDAILKANQLKPDVVLMDLSLPNGLDG 63 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 FT K I++ VK++ L+ E + AI GA+G++ K + +F A+ + G Sbjct: 64 FTASKEIRKSNPLVKIVILTMHDEEIFVQEAITVGAHGYILKNSHGELLFQAIVEVYRGK 123 Query: 125 TFFPSETLNYIKSNKCSTNSSTV-TVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 F+ + I + +++ T+ +VL+ RE ++R +V G SNKE+ADKLL+S KTV Sbjct: 124 CFYKTSVSQEIINLWLRSDAKTLPSVLTLREKELVRLIVLGYSNKEMADKLLISVKTVEN 183 Query: 184 HKSNIYGKLGLHSIVELIDYA 204 HK+NI KLGL S +LI YA Sbjct: 184 HKTNIMQKLGLDSKHQLIQYA 204 >UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microscilla marina ATCC 23134 RepID=A1ZEE6_9SPHI Length = 213 Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 116/203 (57%), Gaps = 7/203 (3%) Query: 8 IMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLR--TRPVDLIIMDIDLPGTDGF 65 I++ H I+R ++ LL K +E++++ + +D L RP D+++ DI+LPG DG Sbjct: 6 IVEDHTIVRQGLKQLLAKYAEMKVLAEFGVPDQIMDNLAKGERP-DIVLCDINLPGMDGL 64 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 ++IKQ K++ L+ + FY +A AGA+G+ K +++++ ++ I +G Sbjct: 65 ALTEKIKQKYPDQKIIILTMHQKEFYVLKAFDAGADGYFHKDTEESELIMGIKKIYNGQK 124 Query: 126 FFPSET----LNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 +F +N + K S+ + + L+ RE +L +V+GL N+EI DKL +S +TV Sbjct: 125 YFCQSVSQILINRLLDTKNSSGKTLLPTLTFREKEVLEQVVAGLGNREIGDKLCISTRTV 184 Query: 182 SAHKSNIYGKLGLHSIVELIDYA 204 H++NI K GL + VEL+ +A Sbjct: 185 ENHRANILRKFGLKNTVELVKFA 207 >UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XAQ5_9BACT Length = 229 Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 4/206 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K T ++++D HP++R + ++ +L + + ++ ++ +++ DL++ DI LP Sbjct: 11 KATKILLVDDHPMMREGLRQIIGNEIDLAVCGEAENAFQALELVKSEKPDLVLADITLPD 70 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G LK ++ + VL +S E YA R ++AG G++ K I A++ +L Sbjct: 71 KNGLELLKDLQAQHPKLPVLVISMHDEALYAERVLRAGGRGYIMKHEGGKKIMQAIRHVL 130 Query: 122 SGYTF----FPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 SG F + L + SS + L++RE + R + GLS KEIA + +S Sbjct: 131 SGQIFVSEKMSARILELFSGHGTQAASSPIENLTDREFEVFRLIGEGLSTKEIAANMHVS 190 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDY 203 KTV H+ NI KLGL + ELI Y Sbjct: 191 AKTVEVHRMNIKTKLGLKTAAELIRY 216 >UniRef50_B2JSN3 Two component transcriptional regulator, LuxR family n=28 Tax=Proteobacteria RepID=B2JSN3_BURP8 Length = 210 Score = 116 bits (290), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 113/205 (55%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 ++I D H I+R ++ ++ +++ + + +D LRT VDL+++D+ +PG G Sbjct: 4 ILIADDHAIVRGGLKQIIATTNDIVVAAEAAQGSEVVDKLRTCAVDLLLLDMTMPGISGV 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 ++R++ Q + VL LS E A RA++AGA G+++K +D + + A++ + G Sbjct: 64 DLIRRVRAEQPALPVLVLSIHDEAQVASRALRAGATGYLTKDSDPDVLLAAIRKLADGGR 123 Query: 126 FFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHK 185 F + ++ + + VLS+RE +L+ L +G S EIAD LS KT+S HK Sbjct: 124 FIDPKLVDAMVFETHRGDMPPHEVLSDREFQVLQMLAAGKSINEIADICALSAKTISTHK 183 Query: 186 SNIYGKLGLHSIVELIDYAKLYELI 210 + KLGL + E+I YA + LI Sbjct: 184 MRLMQKLGLANNAEVIRYAIRHGLI 208 >UniRef50_C9QGW5 Putative two-component response regulator n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QGW5_VIBOR Length = 210 Score = 115 bits (289), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 112/201 (55%), Gaps = 9/201 (4%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M + +++D+ PI+R +I ++ S V + + + L P+DL+I+D+DL Sbjct: 1 MPISKALVIDSQPIMREAIGQIIHDLSVSTQVYQASSSQFGLQILNNHPIDLVILDVDLQ 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G+DGF F++R + K+LF+S+ ++ A Q GANG+++K + + A+ + Sbjct: 61 GSDGFEFVRRSRAHGYRGKILFISASRHPMFSNTAKQIGANGYITKMESTSMLKEAIVSV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 G++ F +E N + + T LS RE + YL+ G +NK+I++ L LS+KT Sbjct: 121 TRGFSVFKNEEGNTQRRH---------TKLSKRETIVFNYLLKGYTNKQISEILTLSSKT 171 Query: 181 VSAHKSNIYGKLGLHSIVELI 201 +S +KS I K + SIVELI Sbjct: 172 ISTYKSRILDKYKVDSIVELI 192 >UniRef50_A8UE45 Two component transcriptional regulator, LuxR family protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UE45_9FLAO Length = 209 Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 117/205 (57%), Gaps = 1/205 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 ++I+D+HPI+R +E+ L + +++ +++R VD+II ++DLP +G Sbjct: 4 ILIVDSHPIVRTGLELFLNSKPDFKVIGNLSSGIEIFEFVRRNQVDVIISEVDLPELNGI 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 T L+ IK+ ++ VL S + E YA ++AGA+G+++K + I AV+ I SG Sbjct: 64 TALRAIKKENKSINVLMFSHQPEEIYAISTLKAGASGYLNKTANVETIEAAVRKIHSGEV 123 Query: 126 FFPSETLNYIK-SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 + +++ + + S LS REV +L+ L G NKEIA +L ++ KTVS + Sbjct: 124 SLSEKMDKHLRYEDTRKSRSRMFKKLSTREVEVLKLLSIGRKNKEIAQELDINEKTVSTY 183 Query: 185 KSNIYGKLGLHSIVELIDYAKLYEL 209 K+ ++ KL + +I++LI AK + L Sbjct: 184 KARLFKKLNVTNIIDLIHQAKHHNL 208 >UniRef50_C4UE15 Positive transcription regulator evgA n=1 Tax=Yersinia aldovae ATCC 35236 RepID=C4UE15_YERAL Length = 215 Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 119/204 (58%), Gaps = 3/204 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +V+I+D HP+ R+++ +LL+K++ + IV + DD + + D I++DID+P + Sbjct: 8 NNVLIVDDHPVARLAVRMLLEKDN-MSIVGEADDGLKALSLAKELCPDFIVVDIDIPSLN 66 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +K ++ +L LS K + Y R AGA+GF+SK N+ A++ I G Sbjct: 67 GIDLVKCLRSRGYEGGILVLSGKDDEHYVKRCASAGADGFISKRNNLLGFTDAMRAIKGG 126 Query: 124 YTFFPSETLNYIK-SNKCSTNS-STVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 Y ++P + + S N S ++ LS++E+ +LR+LV G+ +I+ K+ +S+KTV Sbjct: 127 YGYYPRDQSRKVAMSGSIEENGQSKISTLSDKELQVLRFLVKGIKVVDISVKMQISDKTV 186 Query: 182 SAHKSNIYGKLGLHSIVELIDYAK 205 S +K + KL L ++VEL D+++ Sbjct: 187 STYKRRLMLKLELKNMVELYDFSQ 210 >UniRef50_A8GBA0 Two component transcriptional regulator, LuxR family n=4 Tax=Enterobacteriaceae RepID=A8GBA0_SERP5 Length = 213 Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 66/197 (33%), Positives = 110/197 (55%), Gaps = 6/197 (3%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 S++++D HP++ +++E L K+S ++ +D + L L+I+DI LP DG Sbjct: 15 SLLLVDDHPVVHVALEAALIKSSRSYVLQAVEDDVQALAQLAAADFALVILDIGLPQVDG 74 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 LK+I++ +L +++ E YA A AGANGFV K + + A++ +L+G Sbjct: 75 LQLLKKIRRHYPQQSILIYTAQEEEIYARMAYAAGANGFVHKGSRLEQLVLAIETVLAGE 134 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 FP+ + T + ++L+ +E+ IL L GLSN +IA+ L +SNKTVS H Sbjct: 135 LSFPAAAMAE------ETQPTEGSLLTPKELQILGLLSKGLSNLQIAEMLSISNKTVSTH 188 Query: 185 KSNIYGKLGLHSIVELI 201 K NI K G +++EL+ Sbjct: 189 KKNILRKTGASNLLELV 205 >UniRef50_A3HV51 Two-component response regulator n=1 Tax=Algoriphagus sp. PR1 RepID=A3HV51_9SPHI Length = 214 Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 2/212 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M I++D HPI+ IE+LL + E+Q++ K + + ++L VDLII DI +P Sbjct: 1 MNEVKTILVDDHPIVMEGIEMLLLEIPEIQLLGKFTNGKSAQEFLSVTAVDLIITDISMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 DG K +KQ KV+ LS Y I A A G++ K N ++ +AV + Sbjct: 61 ELDGLQLTKWVKQNHPETKVIILSMHDNDHYVQEIILADAEGYLLKENTSEELVNAVNRV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNS--STVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 L ++ + + ++SN N + LS RE+ +L+ ++ L+ +EIADKL +S Sbjct: 121 LDDGIYYSDQIVGKLRSNFQLQNKKHEILQSLSERELDVLQLIIQELTTQEIADKLFISR 180 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV +HK N++ K +S+V L+ ++ +LI Sbjct: 181 HTVESHKKNLFKKTDQNSLVGLVKFSISNQLI 212 >UniRef50_A3U840 DNA-binding response regulator, LuxR family protein n=1 Tax=Croceibacter atlanticus HTCC2559 RepID=A3U840_9FLAO Length = 210 Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 123/208 (59%), Gaps = 4/208 (1%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 +V+I D HPI+ + +L+K+ +IV K++D +++ + D+IIMDID+P + G Sbjct: 3 NVLIADAHPIVIKGLASILKKDEAYKIVAKSNDENELKNHISLKSPDIIIMDIDMPNSSG 62 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 + +K +KQ V+++ S + E YA AI+ GA+G+++K I A+ + G Sbjct: 63 LSIIKTLKQNNPEVRIIIFSHQPEELYALSAIRFGASGYINKSKSLKKIKTAIDQVARGG 122 Query: 125 TFFPSETLNYIKSNKCSTNSSTVT---VLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + S+ ++ S+K S+ + V+ LS+RE+ +L ++ GL NK+IA+ L ++ KTV Sbjct: 123 IYL-SKFISEKISSKSSSKTGVVSKYRALSSREIEVLNFISKGLKNKDIAEMLKINEKTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYEL 209 S +K+ + KL + S+ LI +K+ EL Sbjct: 182 STYKTRLQKKLNVDSVAGLIKQSKMLEL 209 >UniRef50_A6AYG5 Response regulator VbsA n=11 Tax=Vibrio RepID=A6AYG5_VIBPA Length = 195 Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 63/198 (31%), Positives = 111/198 (56%), Gaps = 8/198 (4%) Query: 7 IIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFT 66 +I D HP++ ++I+ LL++ V + L+ ++L+I+D++L DGF Sbjct: 4 LIFDDHPLVCVAIKSLLKELGMTNEVFTATSAKSAFKTLKESNIELLILDVNLADCDGFD 63 Query: 67 FLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTF 126 F KRIK KV+F S+++ Y+ A ++GA+G+V K + + + A++ ++ GYTF Sbjct: 64 FYKRIKSHGYEGKVIFFSAETSQMYSQMAFRSGADGYVCKSENHDILKDAIEAVVKGYTF 123 Query: 127 FPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHKS 186 F K + + + LS+RE +++YL+ G SN++IA L +S+KTVS +K Sbjct: 124 F--------KFKQVANEVREMPQLSSRESAVMKYLLQGKSNRDIASVLSISDKTVSTYKR 175 Query: 187 NIYGKLGLHSIVELIDYA 204 + K + +IVEL A Sbjct: 176 RVLDKFNVKNIVELTRVA 193 >UniRef50_C1SMK1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMK1_9BACT Length = 219 Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 113/208 (54%), Gaps = 4/208 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MK SV I+D H ++R + +++ + +++++ DD + + L D+II+D+ L Sbjct: 1 MKNYSVFIIDDHAVVREGLAMVINQEADMEVCGSADDGPVALQKLFNIEPDIIIVDLSLT 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 +DG +K IK + +L LS + E +A R ++AGA+G+V K + I A++ I Sbjct: 61 TSDGLEVIKAIKARYPNIFILVLSMREEMVFAERCVRAGASGYVMKSEKPSVIIEALRKI 120 Query: 121 LSGYTFFPSETLNYIKSN----KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 + G +F + YI + K + V L++RE + + + +G + K+IA KL L Sbjct: 121 IKGKIYFSEKMTEYILNKAMNVKNCEDKDVVEALTDREFQVFQMIGNGFTTKQIATKLNL 180 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYA 204 S KT+ A + ++ KLGL S EL YA Sbjct: 181 SVKTIDAFRESMKHKLGLKSAPELSQYA 208 >UniRef50_Q88HE8 DNA-binding response regulator, LuxR family n=5 Tax=Pseudomonas RepID=Q88HE8_PSEPK Length = 204 Score = 112 bits (279), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 4/202 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 T+V+I+D HPI+ LL + ++ + + R D++I+DI LPG D Sbjct: 2 TTVLIVDDHPIV-RLSLRLLLERERFHVIGEVGNGSEVAQVARELRPDVVILDIGLPGLD 60 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +KR++ ++ K + L+ ++ Y R + AG FV+K D + A++ + G Sbjct: 61 GMEVIKRLQSLEPVPKFMVLTGQATDLYVRRCLDAGIGAFVTKEEDHEALLFALKALTKG 120 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 Y+ FP ++N SN + + LSNRE+ +LR L G +NK I + LS KT+S Sbjct: 121 YSTFPQMSVN---SNSLESEPVRLASLSNREMEVLRRLARGENNKNIGTCMNLSAKTIST 177 Query: 184 HKSNIYGKLGLHSIVELIDYAK 205 ++ I KL S+VE++D AK Sbjct: 178 YRGRIMEKLKTESLVEMVDLAK 199 >UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9H4_DESAH Length = 217 Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 108/211 (51%), Gaps = 10/211 (4%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MK V+I D H ++R I +++ + +V + D ++ L T+P DL+I+DI +P Sbjct: 1 MKACRVVIADDHAMLRRGICQVIETQEGVSVVGEVGDGIELLNLLSTQPADLVILDISMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G K+I+ +K+LFLS Y A AGANG++ K + +I A+ I Sbjct: 61 KMSGIEAAKKIRATYPGIKILFLSMHKRNEYLYHAFSAGANGYLLKEDTDTEILTAMDTI 120 Query: 121 LSGYTFFPS-------ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADK 173 L G F S + L + N S T LS RE +L L G SNK+IAD Sbjct: 121 LEGKAFLSSIFTKDMPDILTDMVKNGSSFPGGT---LSPREEEVLTLLAEGKSNKKIADI 177 Query: 174 LLLSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 L +S +TV H+++I +L L ++ +LI YA Sbjct: 178 LCISTRTVEHHRASIMKRLDLRTLADLIKYA 208 >UniRef50_A1VB77 Two component transcriptional regulator, LuxR family n=5 Tax=Desulfovibrio RepID=A1VB77_DESVV Length = 216 Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 116/207 (56%), Gaps = 6/207 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P +V+I++ I+R I+ LL N E IV + D + + D+++MD+ LP Sbjct: 2 PITVVIVEDLDIVREGIKALLDANGEFIIVGEASDGIEALRIVEKHAPDIVLMDLTLPVM 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +G ++ IK+ + T KVL L++ + R + AGA+G++ K ++ +F A+Q +L+ Sbjct: 62 EGAEAIREIKRRRETTKVLALTAHKKDSLIYRTLSAGADGYLLKNASRDILFQAMQTVLA 121 Query: 123 GYTFFPSETL-----NYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 G + E ++++ + +S + +LS+RE +L+ + G NK +A+KL +S Sbjct: 122 GRRYISPEISDLLIDDFLRHGR-RDEASMLDLLSDREKQVLKLVAEGHGNKAVAEKLCIS 180 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYA 204 +KTV HK+N+ KLG S EL+ +A Sbjct: 181 HKTVEKHKANLKRKLGTASTAELVTFA 207 >UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGZ7_9SPHI Length = 218 Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 119/212 (56%), Gaps = 14/212 (6%) Query: 7 IIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRT-RP-----VDLIIMDIDLP 60 +++D H I+R I +LL++ L+I+ + +D +D L+ +P DLI+MDI LP Sbjct: 1 MLVDDHSIVRDGIRLLLEQADGLEIIDEANDGEEVLDKLKVLQPDPSLLPDLILMDISLP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G G + I ++ V+VL LS + Y R+++AGA G++ K + +++ A++ I Sbjct: 61 GMSGIQTTQVISRLYKNVRVLMLSMHNNEDYILRSVEAGAYGYILKDSSSDEMIKAIRTI 120 Query: 121 LSGYTFFPSET--------LNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIAD 172 SG ++ S + +K + + LSN+E IL++LV G+S++EIA+ Sbjct: 121 ASGEKYYSSPVASIILSGYMQQLKKGDRHGRAERQSKLSNKEKEILQFLVDGMSSREIAE 180 Query: 173 KLLLSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 KL LS +TV H++N+ +L + + EL+ A Sbjct: 181 KLQLSVRTVDNHRANMMRRLQVRNAAELVRMA 212 >UniRef50_C9QEV1 Response regulator VbsA n=2 Tax=Vibrio RepID=C9QEV1_VIBOR Length = 199 Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 64/197 (32%), Positives = 112/197 (56%), Gaps = 7/197 (3%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 +++I+D HP++ +++ +++ N E +++ + + YL VD++I+DI+L DG Sbjct: 2 NILIVDDHPLVCAALKNVIEDNFENATIVQAFNAKKAFVYLAENKVDILILDIELGDDDG 61 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 F L + K KV+ +SSK E + AI AGA+G++ K + + A++ + SGY Sbjct: 62 FDLLHKAKGFGFDGKVIVVSSKDEKLCSDLAISAGASGYLDKKESVSRVADAIKAVNSGY 121 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 T+F ++N ST + LS RE ++LR L+ G +NKEIA ++ +S KTVS + Sbjct: 122 TYFR-------QANAASTQGTGAIKLSTRESSVLRLLLDGHTNKEIARRMDISEKTVSTY 174 Query: 185 KSNIYGKLGLHSIVELI 201 K I K + S+ L+ Sbjct: 175 KRRILDKYDVRSVFMLV 191 >UniRef50_A8LG56 Two component transcriptional regulator, LuxR family n=4 Tax=Actinomycetales RepID=A8LG56_FRASN Length = 244 Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 108/195 (55%), Gaps = 4/195 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P SV+++D ++R+ + V+L+ E+ +V + D + +R D++IMDI +P Sbjct: 28 PVSVLLVDDEELVRVGLRVILESGGEIDVVGEASDGSQVVPLIRENTPDVVIMDIRMPRV 87 Query: 63 DGFTFLKRI-KQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG ++ I + K+L L++ Y A+++GANGF+ K +I AV+ I+ Sbjct: 88 DGLAAIREILADVADPPKILVLTTFELDDYVYEALRSGANGFLLKRARPAEIVQAVRTIV 147 Query: 122 SGYTFFPSETLNYI---KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 S + E + Y+ + N+ + + VL++RE +LR + GLSN EIA++L L Sbjct: 148 SSESLLFPEAIRYMAGKRPNREAHETMRRAVLTDREADVLRLISEGLSNNEIANRLYLGA 207 Query: 179 KTVSAHKSNIYGKLG 193 +TV +H S++ KLG Sbjct: 208 QTVKSHVSSVLAKLG 222 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 104/203 (51%), Gaps = 4/203 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +P V++ D HPI+R ++ L +L +V + D + + D++++D+++PG Sbjct: 3 EPIRVLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNMPG 62 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +DG L R+ KV+ L+S +E A+ AGA GF+ K D + + A++ + Sbjct: 63 SDGAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSVA 122 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 G F E + + + V L+ RE +L + +G SN+EIA +L ++ KTV Sbjct: 123 DGQVIFAREAVTAM----TAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEKTV 178 Query: 182 SAHKSNIYGKLGLHSIVELIDYA 204 H S+++ KLG+ + YA Sbjct: 179 KTHLSSLFRKLGVADRTQAALYA 201 >UniRef50_Q07MS7 Two component transcriptional regulator, LuxR family n=4 Tax=Bradyrhizobiaceae RepID=Q07MS7_RHOP5 Length = 210 Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 1/199 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V+I+D HPII L + E++I+ D ++ RP D+ ++DI+LPG GF Sbjct: 3 VLIVDDHPIIASGCRALFAGDPEIEILEAHDAESGERGFVTERP-DVCVLDINLPGVSGF 61 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 +RI + +++ S + +A RAI+AGA G+VSK D D+ A++ + G Sbjct: 62 ELARRILAREPGARIIMFSMNDDPAFAARAIEAGAKGYVSKAGDPCDLADAIREVGEGGV 121 Query: 126 FFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHK 185 + T I + + + L+ RE+ ILR + +G S EIA ++ S KT++ Sbjct: 122 YLAPATAKSIAFAAIGSPENRLAKLNAREIEILRLIAAGNSLSEIAWQVRASYKTIANTS 181 Query: 186 SNIYGKLGLHSIVELIDYA 204 S + KLG+ S EL+ A Sbjct: 182 SLMRQKLGVRSSAELMRLA 200 >UniRef50_Q1YTG7 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTG7_9GAMM Length = 214 Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 121/207 (58%), Gaps = 7/207 (3%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +S++++D H ++R ++ +L ++ ++ + +D + +R + L+++DI LPG Sbjct: 2 SSILLVDDHAVVRNGLKQMLIEHLGSVVLGEANDAIEAMQQVRKQDWGLVVLDIRLPGRS 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G LK+IK + + VL LSS E YA R IQAGA G++SK +++ +I AV+ +G Sbjct: 62 GVDVLKQIKSEKPHLPVLILSSYPESQYAVRLIQAGAAGYISKDSEETEIIKAVKTAAAG 121 Query: 124 YTFFPSETLNYIKSNKCS---TNSSTVTV---LSNREVTILRYLVSGLSNKEIADKLLLS 177 + +E + + +N S +N+ +++ LS+RE I L SG K+IA+KL +S Sbjct: 122 GRYI-NEIVGGLLANTMSRSFSNADDLSLYESLSDREYQIFLELASGKRAKDIAEKLQVS 180 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYA 204 KTV+ H+S + K+G + ELI YA Sbjct: 181 AKTVATHRSRLMQKMGFSTNAELILYA 207 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 66/208 (31%), Positives = 111/208 (53%), Gaps = 4/208 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MK S+II D H +IR I+ LLQ E ++V + D I ++ T +++++DI +P Sbjct: 2 MKKISIIIADDHTLIRDGIKSLLQSVDEFEVVGEATDGDELIQFIDTLDPEIVVLDITMP 61 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G + +K+ + VK + LS Y +++Q+GA ++ K D +I AV+ + Sbjct: 62 KKSGIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAVKAV 121 Query: 121 LSGYTFFPSE----TLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 +G +F + LN + + + S L+ RE+ +L+ + GLS K IADKL + Sbjct: 122 SAGQKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIADKLFI 181 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYA 204 S +TV H+ N+ KL +H+ ELI A Sbjct: 182 SVRTVETHRINLMKKLDVHNSAELIKKA 209 >UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobacteria RepID=Q5ZS73_LEGPH Length = 225 Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 54/196 (27%), Positives = 114/196 (58%), Gaps = 1/196 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V+I+D H ++RM I LL+ S++ +V + + Y++T D++++D+ +PG DG+ Sbjct: 10 VLIVDDHALVRMGIRRLLEDMSDVDVVADAESGEQALAYVKTHSPDVVLLDMKMPGIDGW 69 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 +R+K+ +KV+ +++ R +Q GA G+++K + ++ A++ + G Sbjct: 70 EVTRRLKKTNPNIKVIAVTAICSDPLPTRVLQLGAMGYLTKESGAEEMAAAIRKVAKGEK 129 Query: 126 FFPSETLNYIKSNKC-STNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 + +E + N + S +LS RE+ ++ + SG++ ++IAD+L LS+KT++ + Sbjct: 130 YLSAEIAQKMAINSLQESQDSPFDLLSEREMQVMLMITSGMNVQDIADRLFLSSKTINGY 189 Query: 185 KSNIYGKLGLHSIVEL 200 + ++ KLG+ + VEL Sbjct: 190 RYRMFEKLGIKNDVEL 205 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 1/203 (0%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +P +++ D H ++R + +LL + +V + D ++ PVD+ ++D+ +P Sbjct: 6 EPLRILLADDHRVLRKGLSLLLSSEEDFSVVAEASDGEEALEKAAKTPVDIALLDLSMPH 65 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G L+R+K +Q V+VL L+ SE Y ++AGANG++ K ++F A++ + Sbjct: 66 MGGLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALRTVA 125 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 +G + + LS RE +L +V G S IADKL LS KTV Sbjct: 126 AGGRYLGEREAELLIDGALEEPEEPA-ALSTREREVLELIVHGYSLSTIADKLYLSIKTV 184 Query: 182 SAHKSNIYGKLGLHSIVELIDYA 204 S +K+ + KL EL+DYA Sbjct: 185 STYKTRLLQKLDCTQNSELVDYA 207 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 61/199 (30%), Positives = 102/199 (51%), Gaps = 5/199 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M VI+ D HP+ R ++ L++ + +V + D + D+ ++DI +P Sbjct: 1 MSKIRVILADDHPLTRQGLKAYLEREENVALVGEAADGDEAWKLIEELKPDVALLDIRMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G DG T +RIK+ + V + L+S Y +++AGA GFV K + A+Q + Sbjct: 61 GADGITLARRIKENKLPVAAIMLTSYDSQQYVLASLKAGAKGFVLKTTSAGALMKAIQTV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 +G F SE + + + + T + LS RE +L GLS+KE+A +L +S +T Sbjct: 121 ATGSLFLDSEVASVVGAQEELTEA-----LSPREREVLLCAARGLSSKEVAAQLYISERT 175 Query: 181 VSAHKSNIYGKLGLHSIVE 199 V H +++Y KLG H+ E Sbjct: 176 VQTHLASVYDKLGAHNKTE 194 >UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92 Tax=Burkholderiales RepID=Q3JFS6_BURP1 Length = 282 Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 118/209 (56%), Gaps = 7/209 (3%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V+I D H ++R + +LQ S ++ + D TI +R+ P ++++D+ +PG +G Sbjct: 71 VLIADDHALVRDGLRHILQNASGYEVAGEAFDSATTIALVRSTPAQVLVLDLSMPGRNGV 130 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 +K+IK+ + +++L L+ +E YA RA +AGA+G+++K + +++ AV + SG Sbjct: 131 ELIKQIKEEKPALRILVLTMHAEQQYAVRAFRAGASGYLTKESASSELVGAVTKVASGGV 190 Query: 126 FFPSETLNYIKSNKCSTNSSTVTV----LSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + +L + S N T+ LS+RE + R + SG + +IAD+L +S KTV Sbjct: 191 YV---SLAMAERFAQSLNEPAETLPHHRLSDREFDVFRRIASGQTLTQIADELCVSAKTV 247 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S +K+ I K+ + L+ YA ++LI Sbjct: 248 STYKTRILEKMQMPHEAALVRYALRHKLI 276 >UniRef50_A9DX27 Response regulator n=1 Tax=Kordia algicida OT-1 RepID=A9DX27_9FLAO Length = 213 Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 112/212 (52%), Gaps = 3/212 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MK ++I D H ++ I V+L+ + I + T + I +L V + I+DI +P Sbjct: 1 MKKIQLLICDDHNLVSEGIAVMLESENNYNIHIVTSGKQ-AIQHLHNHEVHVFILDISMP 59 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 DG L +K+ + + VL L+ + Y +AI+ GA G+V K + + A+Q + Sbjct: 60 EMDGLVVLDTLKEEKLSQNVLMLTMHDQAKYIKKAIEKGAKGYVLKSTSKTMLVEAIQKV 119 Query: 121 LSGYTFF-PSETLNYIKSNKCSTNSSTVTV-LSNREVTILRYLVSGLSNKEIADKLLLSN 178 +G F+ P T + +++ S N V L+ RE+ IL+ + KEIA+ L +S Sbjct: 120 YNGENFYDPRLTEILLNTSEESKNKQATHVKLTPREIDILKLIAQNKKTKEIAELLFISV 179 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV +HK N+Y KL +HS+ EL+ YA ++ I Sbjct: 180 NTVQSHKKNLYSKLNIHSVSELVTYAIQHKFI 211 >UniRef50_A4CPM8 Regulatory protein, LuxR:Response regulator receiver n=4 Tax=Flavobacteria RepID=A4CPM8_9FLAO Length = 226 Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 66/209 (31%), Positives = 115/209 (55%), Gaps = 1/209 (0%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K +V+I D HP++R+ I+ +L+ + ++Q++ L D++I+++D+P Sbjct: 17 KMINVLIADNHPVVRLGIKQVLENDGDIQVLGDVGTTTALFQMLSKATPDVLILEMDIPE 76 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G L+++K V+VL S +SE YA I+AGA G++SK + + + AV + Sbjct: 77 INGIATLRKMKDEYPEVQVLIYSGQSEDVYALSTIRAGARGYLSKSAELSYLADAVHKVS 136 Query: 122 SGYTFFPSETLNYIKSNKCSTNSST-VTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 G F +E + ++ + LS REV +L+ L SG NKE+A L L+ KT Sbjct: 137 DGGMFITNELAQRLAFDEGTQKPRRFFRKLSTREVEVLKMLASGKRNKEVALGLNLNEKT 196 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 VS +K+ + KL + ++V+L+ AK EL Sbjct: 197 VSTYKARLMKKLNVDNMVDLLQQAKALEL 225 >UniRef50_C6VZS6 Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VZS6_DYAFD Length = 209 Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 112/201 (55%), Gaps = 5/201 (2%) Query: 7 IIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFT 66 +++D H ++RMS+ ++L+ IV + +D+ + YL DLI++DID+PG G + Sbjct: 4 LVVDDHFLVRMSMRLVLEDLYPHSIVHEAEDFEDAMSYLLNHQYDLILLDIDIPGGVGTS 63 Query: 67 FLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTF 126 + RI++ Q V +L S+ E F A + AGANG++SK ++++ A+Q ++ + Sbjct: 64 MIARIREHQQLVPILVCSAADEQFNALEYVSAGANGYLSKSAEKSETVRAIQTVMRKNRY 123 Query: 127 FPSET----LNYIKSNKCSTNSST-VTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 LN I K + T + LS RE I L++G KEIA L + + TV Sbjct: 124 VSEAVQERLLNAIVFQKQARKRPTGIKSLSVREREIAELLITGKWVKEIASLLDIQSNTV 183 Query: 182 SAHKSNIYGKLGLHSIVELID 202 S +K+ I+ KLG+ +I+EL + Sbjct: 184 STYKARIFEKLGVDNIIELAE 204 >UniRef50_A1TVD4 Two component transcriptional regulator, LuxR family n=9 Tax=Burkholderiales RepID=A1TVD4_ACIAC Length = 209 Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 1/200 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V++ D H ++R I L + ++Q+ + Y + LR P D++++D+++PG G Sbjct: 4 VVLCDDHAVLRRGIRDTLTEAPDIQVTGEAGGYSELREILRKAPCDVLLLDLNMPGRSGL 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 L +K+ S +KVL +S E YA R ++AGA G+ +K D ++ AV+ ++ G Sbjct: 64 EVLSSLKETDSAIKVLVVSMYPEDQYALRCLRAGAQGYANKAGDPMELIEAVRTVMKGRK 123 Query: 126 FFPSETLNYIKSNKCSTNSSTV-TVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 + E + + LS RE+ L + SG +IA++L+LS KTVS + Sbjct: 124 YLTPEVAQMLADSLAQPAPELPHEALSERELQTLVKIASGKRLSDIAEELMLSPKTVSVY 183 Query: 185 KSNIYGKLGLHSIVELIDYA 204 +S + KL L + EL YA Sbjct: 184 RSRVLEKLKLSNNAELTVYA 203 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 59/188 (31%), Positives = 105/188 (55%), Gaps = 1/188 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V+++D H ++R + L+ ++++V + D I D+I+MDI +PGTDG Sbjct: 10 VLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARAEELRPDVILMDIKMPGTDGI 69 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 L+R++++ + +VL ++S +E A++AGA G+V K D + + A++ + +G+ Sbjct: 70 EALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRSVHAGHV 129 Query: 126 FF-PSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 P + + + +SS L++RE +L ++ G SN+EIA L+LS KTV H Sbjct: 130 LLQPEVAVALLTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSEKTVKTH 189 Query: 185 KSNIYGKL 192 SNI KL Sbjct: 190 VSNILMKL 197 >UniRef50_A0M543 Two-component system response regulator n=3 Tax=Flavobacteria RepID=A0M543_GRAFK Length = 212 Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 109/207 (52%), Gaps = 4/207 (1%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V+I D HPII ++ +LQ N LQ+ + + L D++I+++DLP +G Sbjct: 4 VLIADHHPIILEGVKCVLQNNPALQVTGRVGSGTQLFNQLEKDAPDVLIVELDLPQINGI 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 ++RIKQ VK L SS E YA AI+AGA G++SK D + A+ + G Sbjct: 64 NAIRRIKQEFPEVKTLIFSSHPEEMYALSAIKAGAAGYISKHTDNETLEKAIYQVARGGI 123 Query: 126 FFPSETLNYIKSNKCSTNSSTVT---VLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + + S S S +T LS RE +L L SG NK+IA+ L ++ KTVS Sbjct: 124 YLNRSITEKLNSG-ISRGKSLITKFKKLSTRETEVLNLLSSGKRNKDIAEALDINEKTVS 182 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYEL 209 +K+ + KL + ++ +LI ++L ++ Sbjct: 183 TYKTRLLKKLKVDNVADLITQSRLLQI 209 >UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, putative n=2 Tax=Shewanella RepID=B8CN77_SHEPW Length = 206 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 59/199 (29%), Positives = 111/199 (55%), Gaps = 3/199 (1%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V+++D HP+ R + L +S+++++ + D+ + ++ L PVDL++ DI++P DG Sbjct: 4 VLLVDDHPLFREGLRYRLSLDSDIEVLAEADNGQQALEILNKMPVDLVLTDINMPQMDGM 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 L+ IK+ + + KV+ LS Y ++ GA+G++ K ++ A++ + +G Sbjct: 64 YLLELIKEQELSCKVVMLSMHDNKEYIMATMRYGADGYILKDVPGKELIEAIKKVAAGKR 123 Query: 126 FFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHK 185 +F ++ +N + S + VT RE +LR + G++NK IA ++ +S +TV HK Sbjct: 124 YFSADVINTLSQELASGKQALVT---QREQLVLRLISLGMNNKRIAQEMDVSVRTVETHK 180 Query: 186 SNIYGKLGLHSIVELIDYA 204 NI KL + S L+ YA Sbjct: 181 RNIKQKLMIDSTAGLVRYA 199 >UniRef50_A6CUQ1 Putative fimbrial protein Z, transcriptional regulator (LuxR/UhpA family) n=1 Tax=Vibrio shilonii AK1 RepID=A6CUQ1_9VIBR Length = 209 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 107/196 (54%), Gaps = 10/196 (5%) Query: 7 IIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFT 66 +I+D +P++R ++ ++ +L +V +T + + ++ ++ ++LII+D++L DGF Sbjct: 10 LIIDNYPLVREALAQIVSSIDDLDLVHQTGNIQTALNLVKNSNIELIILDVNLAEADGFE 69 Query: 67 FLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTF 126 F++R K +F+SS Y+ A + G NG++SK D I A+ ++ GY Sbjct: 70 FMRRAYACGYNGKAIFVSSYGYPVYSETAYKLGVNGYISKSEDSPLIRDAISGVMRGYNL 129 Query: 127 FPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHKS 186 F ++ S VLS RE + YL G +NK+I++ L LS KT+S +KS Sbjct: 130 FKTDY----------KERSRNIVLSQRETVVFNYLKKGYTNKQISEFLSLSAKTISTYKS 179 Query: 187 NIYGKLGLHSIVELID 202 I K +SIVELI+ Sbjct: 180 RILDKYEANSIVELIN 195 >UniRef50_C1A5E6 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5E6_GEMAT Length = 213 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 111/207 (53%), Gaps = 4/207 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 T V+++D H ++R + VLL+ + +V + + + DL+I+D+++PG D Sbjct: 5 TRVVLVDDHSLVRRGLAVLLRLDGRHDVVGEAGTGEAAVPLIEAERPDLVILDLNMPGID 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G L+R++ T +VL LS E G+A+ AGA+G++ K + +++F A++ +L G Sbjct: 65 GLETLRRVRAKGLTTRVLVLSMHDETHLVGQALSAGADGYLLKDSMDDELFFAIESVLRG 124 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + + I + + L+ RE +L+ + +GL+ +A+ L +S T + Sbjct: 125 QRYLAA----AIDRARLQESRMRPVSLTAREREVLQLIANGLTTSAVAEALNISPHTATR 180 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H++N+ KL +H+ VEL+ A LI Sbjct: 181 HRANLMQKLNVHNQVELVRIAASQGLI 207 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 111/213 (52%), Gaps = 3/213 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M+ +I++D H + R + LL + +++V + + L D++ MD +P Sbjct: 1 MELCRIILVDDHSLFRSGMRGLLDRYDGIRVVGEASTGEEFLAMLPATEADVVFMDFAMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G +G ++ ++ +KV+ LS + Y R +QAGA GF+ K + +++ A++ + Sbjct: 61 GMNGAETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIETV 120 Query: 121 LSGYTFFPSETLNYIKSN---KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 +G T+F E L + S S + LS RE+ IL + GLSN+EIAD+L +S Sbjct: 121 AAGGTYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFIS 180 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +TV H++NI K G + L+ YA + L+ Sbjct: 181 KRTVDKHRANILEKTGCKNTASLVVYAVRHGLV 213 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 108/195 (55%), Gaps = 4/195 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 T V+I+D H + R + +L +++V + D+ +D++ PVDL++MD+ +P D Sbjct: 14 TRVLIVDDHELARAGLAAVLACEPGIEVVGEADNGAAALDFVARHPVDLVMMDLQMPVID 73 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +RIK + + ++ ++ +++ A++AG G++ K + +I AV+ +L G Sbjct: 74 GIEATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVRQVLRG 133 Query: 124 YTFF-PS---ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 F P +TL + + +++ + L+ RE +LR L+ G +N+EIA +L++S Sbjct: 134 EAFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIARELIISPG 193 Query: 180 TVSAHKSNIYGKLGL 194 TV H +I KLG+ Sbjct: 194 TVKVHVEHIIAKLGV 208 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 6/204 (2%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V++ D HPI+R+ + LL+ ++ +V + ++ RT D+ ++DI +PG +G Sbjct: 8 VLLADDHPIVRVGLRALLEAEPDIAVVGEAGTADEAVELARTLQPDVAVLDISMPG-NGL 66 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 L+RI + + L L+ +E Y +QAG +G+V K + D+ A++++ G Sbjct: 67 EALRRIASLGLPTRTLILTVHAEERYLLPVLQAGGSGYVRKSSLHTDLVEAIRLVARGEV 126 Query: 126 FF---PSETL--NYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 F + TL Y+ + +LS RE +LR +G + +EIAD+L LS KT Sbjct: 127 FIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQLFLSPKT 186 Query: 181 VSAHKSNIYGKLGLHSIVELIDYA 204 V ++ + KLG EL+ +A Sbjct: 187 VETYRHRVMQKLGFSRRSELVRFA 210 >UniRef50_C7PF69 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PF69_CHIPD Length = 208 Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 114/207 (55%), Gaps = 6/207 (2%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 +++++D ++R ++LQK+ + V + + T+ L T+ DL+I+DID+PG + Sbjct: 3 NILVVDDQEVVRYGTTLILQKSIDDAQVSEAGSFEDTLKILSTKKFDLVILDIDMPGGNN 62 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 L I+ +++L SS E + R ++AGA+GF+SK +I +A + +L Sbjct: 63 HQMLDVIRLRHPDIRILIFSSYDEQIFGWRYLEAGADGFLSKKTGIEEIKNAAKTLLRDE 122 Query: 125 TF----FPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 + LN + K +TN + LS+RE I++ L+ G S EIADKL L T Sbjct: 123 KYLSPTLKQTLLNNFTNKKSATNP--IQRLSSRENNIMQLLIKGSSVAEIADKLSLQIST 180 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLY 207 VS +K I+ KL + +++E+I+ +LY Sbjct: 181 VSTYKKRIFEKLQVSNVIEMIEKVQLY 207 >UniRef50_Q2RYV1 Two-component response regulator n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RYV1_SALRD Length = 229 Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 111/205 (54%), Gaps = 4/205 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 T ++++D HP IR + ++ E+++ ++ + + + D+++++I L D Sbjct: 10 TQIVVVDKHPAIREVLRSRIEGRPEMELEAESANSEDALALVEQHDPDVVVVEISLGDAD 69 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G T ++ I+ V++L S +E YA RA++AGA+G+V K ++ A++++ G Sbjct: 70 GLTLIQEIRSTVPEVRILVFSKYNEDLYAERAVEAGASGYVMKTKPTEEVMRAIELVSEG 129 Query: 124 YTFF----PSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 F S L+ + T +S + L++RE+T+ R + G S ++IAD+L L+ K Sbjct: 130 QVFLSRHVSSRILSRLVRGSGDTETSPLEKLTDRELTVFRKIGEGHSVRQIADQLDLNRK 189 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYA 204 T+ ++ KLG ++ +L+ +A Sbjct: 190 TIETYRRRAKEKLGHETVEDLLRHA 214 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 115/203 (56%), Gaps = 4/203 (1%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 ++I + H ++R ++ L+ SE Q+V + D+ I+ R DLI++D+ +P +G Sbjct: 8 ILITEDHALVRKGLKSLISSRSEFQVVGEADNGLAAIEMTRKCKPDLILLDLSMPKMNGL 67 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 ++++K+ + VK+L ++ + Y A++ GA+G++ K +D ++F A++ I+ G Sbjct: 68 ATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAIRAIMDGKA 127 Query: 126 FFPS----ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + S + ++ + + + + L+ RE + + + G +N++IAD L +S KTV Sbjct: 128 YLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADLLFISPKTV 187 Query: 182 SAHKSNIYGKLGLHSIVELIDYA 204 H++N+ KL LHS E+ ++A Sbjct: 188 DKHRTNLMKKLDLHSAREVSNFA 210 >UniRef50_A5VJY7 Two component transcriptional regulator, LuxR family n=14 Tax=Lactobacillus RepID=A5VJY7_LACRD Length = 217 Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 117/215 (54%), Gaps = 13/215 (6%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDY-LRTRP--VDLIIMDIDLP-G 61 V++ D +PIIRM+++ L+++ +++ + ID LR +D+IIMD+ +P G Sbjct: 4 VLVADNYPIIRMAVKNLVEQLDNFKVIAEE---ATGIDASLRAEQGDIDIIIMDLAMPPG 60 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G +KRI + K++ SS++E Y +AI GAN ++ K + ++ HA++ + Sbjct: 61 ENGLITIKRIHEHFPNTKIIIFSSRNEPQYINQAIYNGANSYILKSSSPKELVHALRHAI 120 Query: 122 SGYTFFPS------ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 +G + + + L IK + LS RE IL +V G +NKEIA K+ Sbjct: 121 NGEKYLDNNIMVTKKDLLVIKGGSPHFDLGNYVALSKREQEILPLIVLGYTNKEIATKMF 180 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S KTV AHK+ I KL L S EL+ YA + L+ Sbjct: 181 ISPKTVEAHKTKIMQKLNLASHAELLHYAVKHRLV 215 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 112/205 (54%), Gaps = 2/205 (0%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +P +++++D HP++R LL+ ++L++V + + I R D+I+MD+ +PG Sbjct: 13 RPITLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKARQLMPDVILMDVSMPG 72 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G + IK + V +L L+S + Y ++AGA G++ K ++++ AV+ + Sbjct: 73 MNGIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVRAVA 132 Query: 122 SGYT-FFPSETLNYIKS-NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 +G + P+ ++ + T + LS RE+ +LR +G +NKEIA L +S + Sbjct: 133 AGESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDISPR 192 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYA 204 TV H +NI+ KLG+ S E + Y Sbjct: 193 TVQVHLANIFSKLGVGSRTEAVLYG 217 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 64/201 (31%), Positives = 107/201 (53%), Gaps = 5/201 (2%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 S+II + H ++R ++ LLQ L + + D ++ +D +L++MDI +P DG Sbjct: 6 SLIIAEDHTLLREGLKSLLQSVPHLIVTGEASDGQMAVDLCDRNQPELVLMDISMPRMDG 65 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 + IK+ V+VL L+ Y A+ AGA+G+V K ++ AV+ +L G Sbjct: 66 VQATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVLGGK 125 Query: 125 TFFP---SETL--NYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 + S+ + Y+ + + SS+ L+ RE I + + G N+EIA+ L++S K Sbjct: 126 IYLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVVSVK 185 Query: 180 TVSAHKSNIYGKLGLHSIVEL 200 TV H+SN+ KLG+HS EL Sbjct: 186 TVEKHRSNLMQKLGVHSAAEL 206 >UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC81D Length = 209 Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 65/199 (32%), Positives = 107/199 (53%), Gaps = 1/199 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V++ D H ++R + +L N ++ +V + DD I + D+I+MDI +P G Sbjct: 5 VVLADDHVLMRQGVSQMLNANPDISVVGECDDGVALIAAVLKLSPDVILMDISMPRMSGL 64 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 + +I +S K+L LS +E Y AGA G++ K + + A++ + + T Sbjct: 65 VAIDKILSQRSDAKILVLSMHNEVEYIEAMRDAGAKGYILKESSGESLVEAIKKVAANKT 124 Query: 126 FFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHK 185 FP E L S++C + S ++VL+ RE + +V+G ++K+IA+ L +S KT H+ Sbjct: 125 CFPDE-LTQSSSDQCQKHVSPLSVLTRREREVFFLVVAGNTSKKIAELLDMSLKTAENHR 183 Query: 186 SNIYGKLGLHSIVELIDYA 204 SNIY KL L S ELI A Sbjct: 184 SNIYKKLNLSSSAELIRMA 202 >UniRef50_B1ZWL0 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZWL0_OPITP Length = 234 Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 112/205 (54%), Gaps = 4/205 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 + V ++D HPI R + VL+ + +L + + D + ID ++ D+ ++DI L T Sbjct: 20 SRVFLVDDHPITRQGVAVLINQERDLMVCGEADSAPVAIDLIQKLSPDVALVDITLKTTS 79 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +K +K ++ + VL +S E +A RA++AGA G++ K I A++ +LSG Sbjct: 80 GIELMKHLKALRPEMPVLIMSMHDESLFAERALRAGAKGYIMKHEASAKILTAIRRVLSG 139 Query: 124 YTFF----PSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 + + L+ + +N+ ++ LS+RE+ + + + +G ++IA KL LS K Sbjct: 140 ELYLSDKMKEKMLHRLVNNRKEEVVFSIDTLSDREMEVFQLIGNGYGTRQIASKLNLSVK 199 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYA 204 T+ +++ ++ KL L S EL+ +A Sbjct: 200 TIDSYREHLKLKLRLESGTELVRHA 224 >UniRef50_C6DD36 Two component transcriptional regulator, LuxR family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6DD36_PECCP Length = 218 Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 113/206 (54%), Gaps = 2/206 (0%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 +V ++D H ++R LL +++Q+V + +L +P+D+ ++DI +P G Sbjct: 12 NVALVDDHIVVRSGFAQLLALENDIQVVGQYASAAQAWPHLLKQPIDVAVIDIAMPDESG 71 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 + L R++Q + + + LS + A+ AGA G+++K ++ AV+++ SG Sbjct: 72 LSLLTRLRQQRPQFRAIILSIYDTTAFVQSALDAGAGGYLTKRCGPEELVQAVRVVSSGG 131 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 + ++ L+ I+ + + L+ RE I L++G+S K IA++L LS+KTV H Sbjct: 132 IYLCADALHAIRHQQ--QPPKELLALTPREREIFSLLINGISVKSIAEQLELSHKTVHVH 189 Query: 185 KSNIYGKLGLHSIVELIDYAKLYELI 210 ++NI KL S VEL+ +A ++L+ Sbjct: 190 RANILSKLQCESTVELVHFALQHQLL 215 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 113/209 (54%), Gaps = 10/209 (4%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLK----TDDYRITIDYLRTRPVDLIIMD 56 M T V+I+D H ++R + ++L + +++V + D + + + RP D+++MD Sbjct: 1 MAHTRVVIVDDHALVRQGLRLILHGVAGIEVVGECSCGEDALKAAV---KDRP-DVMLMD 56 Query: 57 IDLP-GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFH 115 + +P G DG T + ++QI V+V+ L+ + + + + AG +G V K +D ++I Sbjct: 57 VHMPQGLDGITTARHLRQIAPQVRVIMLTMFDDRVHVEKMLDAGVSGIVFKHDDSSEIVA 116 Query: 116 AVQMILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 A+Q G+ + S + + + S T LS RE +L L G +N+E+AD L Sbjct: 117 AIQHGQPGHPYL-SRRWGQRANAETVSPSRTAERLSPRETEVLVLLAQGYTNREVADALH 175 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 +S KTV H+ +I ++GLHS L+ YA Sbjct: 176 ISVKTVETHRQHIMRRIGLHSRAALVRYA 204 >UniRef50_B9TGG7 Response regulator uvrY, putative n=1 Tax=Ricinus communis RepID=B9TGG7_RICCO Length = 210 Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 1/200 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 +++ D HP+IR+ + L ++ + + +D +R + DL+++D ++PG G Sbjct: 4 ILVADDHPLIRIGLSHLCALAGDMAVTFQAATSGEVLDRIRKQDFDLLVLDTEMPGITGA 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 + R+ + +L S +E R + AGA G++SK D + A++ I SG Sbjct: 64 ELIARVHAHVPRLPILAFSVHNEAQVVRRILYAGAAGYLSKDCDPETLLFAIRKIASGGR 123 Query: 126 FFPSETLNYIKSNKCSTNSSTV-TVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 F + I +K S LSNRE+ ILR LV+G + ++A +L++SNKTVS H Sbjct: 124 FIDLKLAERIAFHKKKDESKRPHEQLSNRELCILRLLVAGKTVNDVASQLVISNKTVSTH 183 Query: 185 KSNIYGKLGLHSIVELIDYA 204 K+ + K+G S E+I Y Sbjct: 184 KARMMEKMGFQSNAEMIRYG 203 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 112/204 (54%), Gaps = 4/204 (1%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 +V++ D H I+R + LL+ + + +V + ++ + TI R ++IIMDI +P +G Sbjct: 4 NVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARELHPEIIIMDISMPDMNG 63 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 ++I +KV+ LS ++ + ++AGA+G++ K ++ +A+Q +LS + Sbjct: 64 IDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQTVLSNH 123 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTVLSN----REVTILRYLVSGLSNKEIADKLLLSNKT 180 T+ + + N + T V+S+ RE +L+ L GLS K+IA L +S KT Sbjct: 124 TYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLHVSVKT 183 Query: 181 VSAHKSNIYGKLGLHSIVELIDYA 204 V H+ NI KLG+ S+ ELI YA Sbjct: 184 VETHRRNITQKLGVGSVAELIKYA 207 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 110/209 (52%), Gaps = 5/209 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MK +++ D H ++R + +LL+ + Q++ D R + D+++MD+ +P Sbjct: 1 MKTIRILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G +G ++I ++FLS S+ Y +A++AGA ++ K + ++D+ AV + Sbjct: 61 GLNGIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIAV 120 Query: 121 LSGYTFFP---SETL--NYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 G FF S+ L +Y++ + + +L+ RE +L+ L G +NKE+A L Sbjct: 121 SEGKAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAILN 180 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 LS TV H+ NI KL LHS ELI YA Sbjct: 181 LSLYTVETHRGNILQKLNLHSGAELILYA 209 >UniRef50_Q391P2 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia sp. 383 RepID=Q391P2_BURS3 Length = 216 Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 111/209 (53%), Gaps = 4/209 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M PT ++++D HPI+R + LL Q+V + + R +D +RT D+ ++D+ L Sbjct: 1 MNPT-LVLVDDHPIVREGLATLLHSVPGYQVVAQAGNERDGLDAVRTHRPDIAVIDLMLG 59 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 T ++ I V+ +S S+ YA A AGA G+V+K N I A+ + Sbjct: 60 DTLALRLIETIAHTYPDTAVVCISMHSDAAYAEPAALAGALGYVNKANVSRTILDAIDSV 119 Query: 121 LSGYTFFPSETLNYI---KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 L G +FP E + + + ++ + LS RE+ ILR + GL+ ++IA+++ S Sbjct: 120 LRGVPYFPPEVQQNLLRRARGQAAKPTTPLAALSPREIEILRMIGEGLTKQQIAERIGHS 179 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKL 206 TV AH++NI KLGL + ELI ++ L Sbjct: 180 ANTVEAHRTNIKRKLGLDNNAELIRFSAL 208 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 115/213 (53%), Gaps = 6/213 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 T ++++D HP+ R ++ +L ++ ++ + DD I+ D+IIMDI +PG D Sbjct: 3 TRIMLVDDHPVFRSGLKHILCTEADYHVIAEADDGESAIEMAAEANPDIIIMDISMPGLD 62 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + IK+ +++L L+ ++ + ++ AGA+G+V K ++ HAV+++++G Sbjct: 63 GIEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKLVMNG 122 Query: 124 YTF-FPS-----ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 + +P+ N + + S +S+ LS RE +L+Y+ G + KEI+ +L +S Sbjct: 123 EHYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTELFIS 182 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 KTV +K + K+G L+ YA + +I Sbjct: 183 IKTVDTYKKRVMEKIGSKKKSALVRYALKHNII 215 >UniRef50_C6Y109 Response regulator receiver n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6Y109_PEDHD Length = 224 Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 118/213 (55%), Gaps = 7/213 (3%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTR-PVDLIIMDIDLPGTD 63 ++++ + H ++R I+ LL+ + + IV + + ++ +R +DL++ D+++PG + Sbjct: 11 NLLLAEDHNVVRSGIKKLLEADEAINIVAEAINGAQALELIRDNGSIDLLLTDLNMPGIN 70 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + + +K VKV+ LS + Y +A QAGA+G++ K D ++ A++ I G Sbjct: 71 GISLISEVKNFNPNVKVVILSMHDDEKYVAQAFQAGASGYLLKNVDAEEMLFALKYISRG 130 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTV------LSNREVTILRYLVSGLSNKEIADKLLLS 177 ++ + + S +STV V S+RE+ IL + GL+N+E+AD+L +S Sbjct: 131 GSYICAALSMSMLSKVLKRINSTVAVAETAIDFSSREIEILELIAEGLTNQEMADRLFIS 190 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +TV H+ ++ K G + LI YA +++++ Sbjct: 191 KRTVEGHRQSLTDKTGCRNTAALIRYAMVHDIL 223 >UniRef50_A7N4M7 Putative uncharacterized protein n=11 Tax=Vibrio RepID=A7N4M7_VIBHB Length = 202 Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 109/199 (54%), Gaps = 12/199 (6%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 +V+I+D P+ ++ L+Q + V+++ D +D +R +PVDL+I+D+ L DG Sbjct: 3 NVLIIDDQPLYSEALASLVQTAFQSVNVVESTDSAEVMDIVRNQPVDLVILDVVLGDRDG 62 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 K I K+LF+SS+ + A + GA+GF++K + I A+ + GY Sbjct: 63 MRLAKNILATGYQGKILFISSRDYSSLSKAAFEMGAHGFLNKNEAKATILDAIVSVTRGY 122 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTV-LSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + F K + N S+ +V LSNRE + YL G SNK+I+++L LS KT+S Sbjct: 123 SVF-----------KATHNQSSGSVTLSNREAMVFHYLAQGYSNKKISEQLSLSAKTIST 171 Query: 184 HKSNIYGKLGLHSIVELID 202 +K+ I K S+VEL++ Sbjct: 172 YKTRILKKYHAESVVELLN 190 >UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7Q7_9GAMM Length = 226 Score = 105 bits (262), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 63/197 (31%), Positives = 104/197 (52%), Gaps = 2/197 (1%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKT-DDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +++++D H I+R LLQK L+++ + D Y + +P D+++MDI LPG Sbjct: 6 TIMLVDDHAIVREGYRSLLQKQDNLEVIAEACDGTEAYSQYKKYQP-DIVVMDISLPGQS 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++RI+Q + K+L S +A +A +AGA G+++K +D D+ A+ + Sbjct: 65 GLKAIERIRQFDAKAKILVFSMHQNPSFALQATRAGALGYITKSSDPEDLIRAIAEVAKN 124 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 ++ + K S + L+ RE ILR LV SN++IA+ L +S KTVS Sbjct: 125 KHTLSADIAQALAMEKLGQEQSALDELTVREFEILRLLVDAKSNQDIAELLNISPKTVSN 184 Query: 184 HKSNIYGKLGLHSIVEL 200 I KLG+ S +EL Sbjct: 185 SHYIIKKKLGVSSDIEL 201 >UniRef50_Q1QZ85 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1QZ85_CHRSD Length = 220 Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 111/206 (53%), Gaps = 3/206 (1%) Query: 7 IIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRP-VDLIIMDIDLPGTDGF 65 I+ D HP+ R ++ L++ + +++ D T D + P DLI++D+ +PG GF Sbjct: 8 IVADDHPLFRAALNQALRQVAPQAEIVEADTMEATTDMVLRHPDADLILLDLHMPGAHGF 67 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 + L +++ V V+ +S E RAI GA+GF+ K + + I A++ +L G Sbjct: 68 SGLIQLRGQSPEVPVVVISGSEEPPVVRRAIDYGASGFIPKSSSLDVIAEAIRQVLEGEV 127 Query: 126 FFPSETLNYI-KSNKCSTN-SSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + P E ++ + +SN+ + + L+ ++ +L L GL NK+IA +L +S T+ A Sbjct: 128 WLPEEMVDILGESNEEEARFAEAIASLTPQQFRVLNMLNEGLLNKQIAYELNVSEATIKA 187 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYEL 209 H + I KLG+HS + + A+ E+ Sbjct: 188 HVTAILRKLGVHSRTQAVIAAQKLEV 213 >UniRef50_C0N6H7 Response regulator receiver domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H7_9GAMM Length = 214 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 112/206 (54%), Gaps = 2/206 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITID-YLRTRPVDLIIMDIDLPGTDG 64 V+++D H ++R + LL++N+++ +V + + Y P D+++MD+ +PG G Sbjct: 7 VMLVDDHAVVRSGLCRLLEQNTDISVVGEAESGEQAYQTYPEISP-DVLVMDMSMPGMGG 65 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 ++RI S KV+ S YA +++ AGA G+V+K D+ AV+ + SG Sbjct: 66 LEAVRRILNRWSGAKVIMFSMHENATYAIQSLTAGAMGYVAKSGHAEDLVKAVREVKSGK 125 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 +F S+ + + + + + L++RE + R L G +IA +L + KTV+ + Sbjct: 126 SFLSSDMAHKVALQSLAGDDNPTQRLTSREFEVFRLLAEGKLVDDIASRLNIGQKTVANY 185 Query: 185 KSNIYGKLGLHSIVELIDYAKLYELI 210 ++++ KLG+HS V+L+ A Y +I Sbjct: 186 QTSLKQKLGIHSPVDLVRLAMKYGVI 211 >UniRef50_Q9RLW5 Virulence protein A n=1 Tax=Klebsiella pneumoniae RepID=Q9RLW5_KLEPN Length = 207 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 109/196 (55%), Gaps = 7/196 (3%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 S +I+D HP R++++ +L+ + + DD+ R +P D++I+D+ L G+ G Sbjct: 9 SAVIIDDHPFARLALKTVLENQNIVVTGEAADDFHAIQLVDRLQP-DIVIVDVMLIGSSG 67 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 + +++Q ++ +S K++ FY ++ AGAN F+SK ++ A+Q + GY Sbjct: 68 IDVVTKLRQNHYAGSIVMVSGKNQNFYRKCSVDAGANAFISKKESMDNFVAAIQAVQRGY 127 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 +FP + N + + + LS +E+ I+RY+VSG N+ IA ++ ++ KTVS + Sbjct: 128 YYFPLPSYNPTPA------ENKILSLSEQEIKIMRYIVSGAPNQNIAAEMNINPKTVSTY 181 Query: 185 KSNIYGKLGLHSIVEL 200 K + GKL ++ +L Sbjct: 182 KRRLMGKLNCKTLKDL 197 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 105/201 (52%), Gaps = 2/201 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 +++ D H + R ++ LL ++ EL++V + + +PVDL+ MDI +PG DG Sbjct: 5 ILLADDHQMFRHALRALLARDPELEVVAEAASGEEVLAIADAQPVDLVCMDIAMPGMDGI 64 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 +R+ ++V+ LS+ ++ + + AGA G+++K +++ A++ + G + Sbjct: 65 EATRRLLARHPALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRTVCEGRS 124 Query: 126 FFPSETLNYIKSNKCSTNS--STVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + E + + + L+ RE +L+ + GL++ +I D+L ++ TV Sbjct: 125 YLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHIAASTVEV 184 Query: 184 HKSNIYGKLGLHSIVELIDYA 204 H+ N+ KL LH++ EL YA Sbjct: 185 HRRNLMRKLDLHNVAELTRYA 205 >UniRef50_B1ZT64 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B1ZT64_OPITP Length = 274 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 7/206 (3%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLK-TDDYRITIDYLRTRPVDLIIMDIDLPGT 62 T + ++D HP++RM + ++ +++++ + D T + ++ RP DL+I DI L G Sbjct: 42 TRIYVVDDHPLMRMGLRAMINGEPDMEVIGEAADSATATAEIMKLRP-DLVIADISLRGN 100 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G +K +K + V+ +S E YA R ++AGA +V K + + A++ + Sbjct: 101 SGIELIKNVKAFDPGIDVVVVSMYDESIYALRVLKAGARAYVMKQDVTTRVLDAIRRARN 160 Query: 123 GYTF----FPSETLN-YIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 G F ++ LN ++ + S V+ LS+RE+ I+ + GL +EIA KL LS Sbjct: 161 GQLFVSERVATQMLNRFVDGTEDGAADSPVSSLSDRELEIVNLIGEGLPTREIAAKLFLS 220 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDY 203 KTV H+ +I KL L + +L+ + Sbjct: 221 IKTVETHRVHIKRKLNLANATQLVQF 246 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 110/205 (53%), Gaps = 7/205 (3%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDY-LRTRPVDLIIMDIDLPGTDG 64 V++ D H I+R L+Q+ S + +V + D ++ ++ P D+++MDI +P +G Sbjct: 9 VLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSMKVHP-DVVVMDIAMPRLNG 67 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 K+IKQ+ T +L L++ Y ++AGA F+ K + A++ + +G Sbjct: 68 IEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAIRAVYAGE 127 Query: 125 TFF-PSETLNYIKS--NKCSTNS--STVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 + PS T I NK + S V L++RE+ +L+ G+SNK+IAD+L LSN+ Sbjct: 128 SVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIADQLYLSNR 187 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYA 204 T+ H SNI+ KL + S E I Y Sbjct: 188 TIQTHLSNIFKKLSVGSRTEAILYG 212 >UniRef50_A5WFD3 Two component transcriptional regulator, LuxR family n=3 Tax=Psychrobacter RepID=A5WFD3_PSYWF Length = 211 Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 113/206 (54%), Gaps = 1/206 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V+++D H ++RM I +L + E++++ + D I ++ D++++D+++P G Sbjct: 4 VLVVDDHDLVRMGISRMLADDPEIEVIGEADSGEAAIRMVKALSPDVVLLDVNMPNIGGV 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 KR++Q VK+L +SS S Y ++AG NG+++K +++ A++ + G Sbjct: 64 ETTKRLRQFDEKVKILAVSSVSSQPYPSMLLKAGVNGYITKGTPLDEMIKAIKKVYQGSK 123 Query: 126 FFPSETLNYIKSNKCSTN-SSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 +F S+ + + N S LS RE + +V+ S ++IAD+L +S KTV+ + Sbjct: 124 YFSSDVAEQLADMLLTDNEESPFDRLSEREKQVAMMVVNCQSPQQIADQLFVSVKTVNTY 183 Query: 185 KSNIYGKLGLHSIVELIDYAKLYELI 210 + I+ K+G+ S V+L A + LI Sbjct: 184 RYRIFEKVGVDSDVKLTHLAMRHGLI 209 >UniRef50_A1WT06 Two component transcriptional regulator, LuxR family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WT06_HALHL Length = 216 Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 109/206 (52%), Gaps = 5/206 (2%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V++ D H +IR +I+ +L+ ++QIV ++ + +R + D+++MD+ +PG G Sbjct: 4 VVLADDHRLIRQAIDGMLRDIPDIQIVAHAENAEHAVAAVREQEPDVVLMDLQMPGMGGV 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 ++R+ + V V+ L+ Y A++AGA G+V K D++++ A++ + G Sbjct: 64 EAIRRLYRSHPKVGVIALTVYQSGPYPAHALRAGAKGYVHKGADRDELIEAIRSVYLGRR 123 Query: 126 FFPSETLNYIKSNKC-STNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 + E ++ N T S L+ RE +L +++G IA L LS KTVS + Sbjct: 124 YICHEVARHVALNSLDGTGESPFDHLTPREFEVLMRILNGQRGTSIAKDLCLSPKTVSTY 183 Query: 185 KSNIYGKLGLHSIVEL----IDYAKL 206 +S I+ +LG+ + +L IDY L Sbjct: 184 RSRIFERLGVRNDAQLTRIAIDYGLL 209 >UniRef50_Q9RLW2 Virulence protein R n=3 Tax=Enterobacteriaceae RepID=Q9RLW2_KLEPN Length = 234 Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 117/208 (56%), Gaps = 9/208 (4%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNS---ELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 SV++++ +P+ ++I+ LL+ + + D RI +D L+ + II+D+DLP Sbjct: 26 SVVLINRYPLESIAIKTLLENKGVSVTGEAINGMDALRI-VDQLQP---NTIIVDVDLPD 81 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG ++ +++ ++ S+K E FY+ AG NGFVSK N I AVQ Sbjct: 82 IDGIGLVETLRKRLYKGSIIVTSNKYEYFYSRCTASAGGNGFVSKKGSINIILSAVQAAH 141 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 +GY++FP + S + + + + LS +E+ +LR+L+ G SN IA K+ +S+KTV Sbjct: 142 NGYSYFPFS--QHRVSGEGAYARNKLQALSEQEIIVLRHLLEGASNFHIAAKMDISSKTV 199 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYEL 209 S +KS + KL ++VELI +A + + Sbjct: 200 STYKSRLMKKLNCQTLVELIGFANKFRI 227 >UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYF0_9SPHI Length = 218 Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 7/215 (3%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P V I D H + R + +L+ + +++V D+ + ID + +P D+I+MD+ +P Sbjct: 2 PVKVAIADDHVLFRKGLVTILELDDNIEVVYGADNGKELIDKVDAQPPDVILMDLKMPVM 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG K IK VKVL LS E + ++ GANG++ K D +++ HA+ +++ Sbjct: 62 DGMEATKIIKAKYPEVKVLVLSMYDEEKFIIHCLELGANGYLLKNTDPDELVHAIGTVMA 121 Query: 123 GYTFFPS-------ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 +F + + LN K K L+ RE +L + L+ E+A+KL Sbjct: 122 KDFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMAEKLF 181 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +SN+TV H+ N+ K G + L+ +A EL+ Sbjct: 182 ISNRTVEGHRKNLLEKTGAKNTAGLVVFALKNELV 216 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 4/206 (1%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P +++ D H ++R I LL+K + IV + D R T+ + T D+ IMDI +PG Sbjct: 4 PLKIVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRETVTLVHTFAPDIAIMDITMPGL 63 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +GF RI + KVL LS + Y +A++AGA G++ K ++ A+ + Sbjct: 64 NGFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNAVRK 123 Query: 123 GYTFF-PS---ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 G T+ PS L + + + L+ R I++ + G S KEIA L LS Sbjct: 124 GETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLNLSV 183 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYA 204 KT+ H+ ++ +LGLH + ++ YA Sbjct: 184 KTIETHRMHLMARLGLHDVAGVVRYA 209 >UniRef50_B2JQB0 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JQB0_BURP8 Length = 194 Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 59/199 (29%), Positives = 104/199 (52%), Gaps = 11/199 (5%) Query: 7 IIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFT 66 +++D HP++R ++ +L ++++ +V + + + L I+D+ LP DG Sbjct: 1 MVVDDHPVMRRALRYVLDESADFDMVAEAGSVAAALTSAAALDLSLAIVDLRLPDGDGID 60 Query: 67 FLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTF 126 + ++ + ++++ SS E AGA+GFVSK +++ ++ +++ GYT Sbjct: 61 LIAQLSSAKPGLRIVVFSSVDERLNGAHVRNAGAHGFVSKLRGPDELLASLGLVMIGYTC 120 Query: 127 FPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHKS 186 F SE + LS RE ++L L+ G SN EIA L LS KTVS +K Sbjct: 121 FASELVE-----------PAGVALSRRETSVLHRLIRGQSNVEIATSLNLSPKTVSTYKM 169 Query: 187 NIYGKLGLHSIVELIDYAK 205 + KL L S+V+L++YAK Sbjct: 170 RLMQKLDLQSVVDLVEYAK 188 >UniRef50_C7LQH4 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQH4_DESBD Length = 222 Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 7/215 (3%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P ++I+D HP+ R + L +L +V + + +T DL ++DI LP Sbjct: 4 PKRILIIDDHPLYRDGLRARLDTRPDLCVVGEAGTCAEGLRLTQTLAPDLAVIDISLPDG 63 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G + I+ + + VL +S ++ + A QAGA+G++SK + I A++ +LS Sbjct: 64 SGIELTREIRLARPDLPVLIVSMHAKLDFIAAAFQAGASGYMSKESGGEGILQAIETVLS 123 Query: 123 GYTFF-----PS--ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 G + PS L+ I K T ++ LS RE ++R L GL+ +EIA KL Sbjct: 124 GGQYLDGSLSPSVLRRLSDISGRKAKTVDASYGSLSLREQQVMRLLAEGLTPEEIAAKLF 183 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S KTV H+ I KLG+ S V + +A LI Sbjct: 184 VSRKTVLNHRYAIMTKLGIKSPVAFVRHAARLGLI 218 >UniRef50_B4D2X8 Two component transcriptional regulator, LuxR family n=2 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2X8_9BACT Length = 242 Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 106/203 (52%), Gaps = 4/203 (1%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V+++D HP IR + ++ + +L + + ++ +R D+ ++DI +PGT+G Sbjct: 25 VLLVDDHPAIRRGMAAIIDEEPDLTTCGEASTAPMALEAMRRLNPDIAVIDISMPGTNGV 84 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 +K + Q +++L LS E YA RA++AGA G+V K + ++ + G Sbjct: 85 ELIKLMLAEQPGLQILMLSMHDESVYALRALRAGAKGYVMKGEALECVLTGLRKVGEGEI 144 Query: 126 F----FPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + F + + + +S V LS+RE +LR L G ++EIA++L LS KTV Sbjct: 145 YVSPKFSDRLIFKTIQSTIAGVASPVDKLSDREFEVLRLLGRGFGSREIAEELSLSVKTV 204 Query: 182 SAHKSNIYGKLGLHSIVELIDYA 204 H+++I KLG E++ +A Sbjct: 205 ETHRAHIKEKLGFKEAGEMVRFA 227 >UniRef50_Q47DK2 Two component transcriptional regulator, LuxR family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47DK2_DECAR Length = 211 Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 2/205 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLK-TDDYRITIDYLRTRPVDLIIMDIDL 59 MK T +I+ D +IR I +++ QI + TD Y R +P D++++DI + Sbjct: 1 MKKTRIILADDQLLIRAGIRAIVETLPGFQIEAECTDGYEAISAIQRLQP-DVVLLDIAM 59 Query: 60 PGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 PG G + I+Q K+L LSS +A+ AG NG++ K ++ A++M Sbjct: 60 PGPSGIEVARTIRQFDPNTKILVLSSVDRPEIIEQALAAGVNGYLLKDFVLAELLQALEM 119 Query: 120 ILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 +L G F + + + S + T L+ R+ ILR + SG + KEIA L +S K Sbjct: 120 VLHGERFLSPKIREMSRFSDAEGTSGSGTQLTARQTEILRLVASGRTTKEIARDLGISPK 179 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYA 204 TV H+S + ++G+H + L +A Sbjct: 180 TVEFHRSRLMERIGVHDVTGLTRFA 204 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 8/209 (3%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRP-----VDLIIMDID 58 T +++ D H ++R + ++L +L +V + D I+ +R R VDL ++D+ Sbjct: 28 TRILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVLDVA 87 Query: 59 LPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQ 118 +P G + + ++ +++L L+ Y A++AGA G+V K D+ A + Sbjct: 88 MPRMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQACR 147 Query: 119 MILSGYTF-FPSETLNYIKS--NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 + G F +P I+S + T L+ RE IL+ + G S++EIAD L Sbjct: 148 AAVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIADTLF 207 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 +S KTV H++NI KLG+ +EL YA Sbjct: 208 ISVKTVERHRANILAKLGMKDRLELTRYA 236 >UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z2_9FIRM Length = 209 Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 62/202 (30%), Positives = 104/202 (51%), Gaps = 4/202 (1%) Query: 7 IIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFT 66 +I+D H +IR I++LL+ S + + + + L +P+DL+IMDI +PG G Sbjct: 1 MIVDDHLLIRAGIKLLLKNTSAYTVTAEAESGEEALRLLAQQPIDLVIMDISMPGMGGLA 60 Query: 67 FLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTF 126 ++ I+ VK+L LS + Y +A+Q GA G++ K + N++F A+Q++ G + Sbjct: 61 CIREIRAHYPAVKILVLSMHEDEEYIYKAMQYGAMGYLPKTSADNELFDALQVLSQGRRY 120 Query: 127 FPSET----LNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 ++ + +VL+ RE + L+ G + EIA++L LS KTV Sbjct: 121 LSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHLSVKTVD 180 Query: 183 AHKSNIYGKLGLHSIVELIDYA 204 HK +IY KL EL+ A Sbjct: 181 THKKHIYEKLHCSRRSELVTLA 202 >UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR family n=29 Tax=Gammaproteobacteria RepID=Q1QVM5_CHRSD Length = 214 Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 109/205 (53%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V++ D H ++R SI +L L+++ + D ++ R D+++MDI +PG G Sbjct: 4 VLVADDHHLVRTSIARMLDSEDGLKVIAEAVDGEEAVNMARELRPDIVLMDIRMPGIGGL 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 ++I + S +KV+ +++ E +A R + AGA GF+SK + +++ A++ I G Sbjct: 64 EATRKIMRGMSDIKVVIVTAFLEEAFAQRLMDAGAAGFISKGTELDEMVRAIRAIFDGQR 123 Query: 126 FFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHK 185 + + + +K T + LS+RE+ + +V+ +I+D+L LS KTV+ ++ Sbjct: 124 YISPDIAQKVVLSKMGTQDNPFDQLSHRELQVAMMIVNCQKVSDISDRLFLSPKTVNTYR 183 Query: 186 SNIYGKLGLHSIVELIDYAKLYELI 210 I+ KL + S VEL Y LI Sbjct: 184 YRIFEKLNVQSDVELTHLGLRYGLI 208 >UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q98DH9_RHILO Length = 215 Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 103/200 (51%), Gaps = 1/200 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 ++I D HPI+R I +L++ +E + + D+ + R ++I+D LP +G Sbjct: 8 IVIADDHPIVRSGIRAVLEQRAEWWVCGEADNGETAVRLAREHAAKIVILDYSLPVLNGL 67 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 + I++ +VL + + ++AGA G++ K D +++ AV ++ G T Sbjct: 68 EATRIIRRTMPETEVLIYTMHEDESLIRETLRAGARGYLLKIEDDSELVAAVAALIRGQT 127 Query: 126 FFPSETLNYIKSNKCSTNSS-TVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 +F + + S T L+NRE ++R++ G SNK IA +L +S KTV +H Sbjct: 128 YFSPRVSECVLQDFLDGQSDVTSRNLTNREREVVRFVSEGESNKRIAARLGVSVKTVDSH 187 Query: 185 KSNIYGKLGLHSIVELIDYA 204 ++ KLGL + V+L+ YA Sbjct: 188 RTTAMRKLGLRNAVDLVRYA 207 >UniRef50_B8ET67 Two component transcriptional regulator, LuxR family n=12 Tax=Proteobacteria RepID=B8ET67_METSB Length = 223 Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 108/202 (53%), Gaps = 8/202 (3%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDD----YRITIDYLRTRPVDLIIMDIDL 59 +++++D H I+R LLQ+ L++V + D YR+ + + +P DL+IMD+ + Sbjct: 5 ATILLVDDHAIVREGYRALLQQQPRLKVVAEAGDGAEAYRL---FKQVKP-DLVIMDLTM 60 Query: 60 PGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 PG G +KRI+Q ++L + +A +AI+AGA G+V+K + + Sbjct: 61 PGLGGVEAVKRIRQWDPAARILVFTMHQNAAFAVQAIRAGAKGYVTKSSPPEALIRGAFD 120 Query: 120 ILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 +L G ++ + + ++ + + VL+ RE ILR L++ S + IA L LS K Sbjct: 121 VLQGRIALSADIDHELALSRVTETPTATDVLTPREFEILRLLLAEKSTEAIAAILGLSPK 180 Query: 180 TVSAHKSNIYGKLGLHSIVELI 201 TV+ + I KLG+ S +EL+ Sbjct: 181 TVANTRYLIKAKLGVASDIELV 202 >UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae RepID=B9E7V9_MACCJ Length = 210 Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 115/212 (54%), Gaps = 5/212 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYL-RTRPVDLIIMDIDL 59 MK +I++D H I+R ++ LL + ++ ++ R +++L T+ DLIIMD+ + Sbjct: 1 MKRMDIILVDDHHIVRQGMKFLLSTEASFNVIADFNNGRELLEHLDETQLPDLIIMDLVM 60 Query: 60 PGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 P +G +RIK VKVL LSS + + + AGA+G+ K ++ + + ++ Sbjct: 61 PELNGIEATRRIKAKYPDVKVLVLSSFIDEEHVLGVMDAGADGYEMKDSEPKALINTIKQ 120 Query: 120 ILSGYTFFPSETLNYIKSNKCSTNSSTV-TVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 I +G F + + K K N + + LS RE+ +L+ + GL+NKEIA+KL +S Sbjct: 121 IAAGEQIFHPDVM---KVRKSGMNLAHLRNPLSKRELEVLKAMSEGLTNKEIAEKLFVSE 177 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 KTV H S+I+ KL + + Y Y+LI Sbjct: 178 KTVKTHVSHIFAKLEVGDRTQASMYGVKYKLI 209 >UniRef50_A3XI64 DNA-binding response regulator, LuxR family protein n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XI64_9FLAO Length = 212 Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 111/207 (53%), Gaps = 4/207 (1%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 ++ + D HPII + +L K++ +I+ D + I L + DL+IM+ID+P G Sbjct: 3 TITVADHHPIIVDGLTHIL-KDTPHEIIDVVSDGKDLIPSLEEQVPDLVIMEIDMPNLQG 61 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 + +K ++++ +K++ S+ E YA AI+AGA G++ K + + AV + G Sbjct: 62 LSAIKELRKLFPGIKIMVFSTHPEGMYALSAIKAGAMGYIGKIAETQTVHKAVVQVARGG 121 Query: 125 TFFPSETLNYIKSNKCSTNSSTV---TVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + + + + + + N+S LS RE +L L SG NK+IA+ L ++ KTV Sbjct: 122 IYLNNNLVEMLSNTDSAQNNSLAYRYKKLSTRETEVLNMLSSGKRNKDIAESLDINEKTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYE 208 S +K+ + KL S+ ELI A+L + Sbjct: 182 STYKTRLLKKLDAGSLAELIQQARLLQ 208 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 112/210 (53%), Gaps = 6/210 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M V++ + H I+R + LL ++++V + ++ R I + D+++MDI +P Sbjct: 1 MNKIKVLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREAIKMVEELAPDVVLMDISMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 +G +++K+ VK+L LS S Y ++AGA+G++ K + D+ A+ Sbjct: 61 ELNGMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHAA 120 Query: 121 LSGYTFF-PSET----LNYIKSNK-CSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKL 174 +G F PS + NY++ + S + +LS RE +L+ + G +N+EIA L Sbjct: 121 HAGDCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGHL 180 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 +S KTV AH+++I KLGL+ EL YA Sbjct: 181 YISPKTVEAHRNHIQKKLGLNGTAELTKYA 210 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 111/201 (55%), Gaps = 2/201 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V++ D H I+R + +++ + +++++++ + + ID D+ ++DI +PG DG Sbjct: 4 VLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHCPDVAVVDISMPGIDGL 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 + R+ + +L L+ E Y RAI+AGA G+++K + + A++ + SG Sbjct: 64 EVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKLHSGSR 123 Query: 126 FFPSET--LNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 F E L ++ ++ S S + LS RE+ +LR+L SG +N+EIAD +S KTV Sbjct: 124 FLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISVKTVDT 183 Query: 184 HKSNIYGKLGLHSIVELIDYA 204 +++ + KL L + ++ +A Sbjct: 184 YRARLLKKLNLRNNADISRFA 204 >UniRef50_A6BYP5 Response regulator receiver domain protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BYP5_9PLAN Length = 221 Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 106/208 (50%), Gaps = 6/208 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 + T V+I+D HPI+R L++ +LQ+ + D I + P DLII+DI L Sbjct: 7 QKTKVMIVDDHPIVREGYSRLIEHQDDLQVCGEADSKVDAIRKIMENPPDLIIVDISLKD 66 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G +K +K S +K+L +S E +A R+++AGA G+V+K + A+ +L Sbjct: 67 GSGLELIKDVKAQFSQIKMLTVSMHDETLFAERSLRAGALGYVNKQQAPEQLIKAIYQVL 126 Query: 122 SGYTFFPSETLNY-----IKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 G + + I S+ S + S + LS+RE+ + + G + + IA KL L Sbjct: 127 KGKVYLSAAVTERMICRSIGSDNYS-DQSPIESLSDRELEVFEQIGEGETTRSIAQKLNL 185 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYA 204 S+KTV ++ NI KL L + L +A Sbjct: 186 SSKTVETYRENIKHKLNLENATALTRHA 213 >UniRef50_C3BGJ6 Two component transcriptional regulator, LuxR n=5 Tax=Firmicutes RepID=C3BGJ6_9BACI Length = 201 Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 107/202 (52%), Gaps = 10/202 (4%) Query: 15 IRMSIEVLLQKNSELQIVLKTDDYRITIDYLRT----RPVDLIIMDIDLPGTDGFTFLKR 70 +R +++LLQK L++V + D ++ LR RP D++I+DI LP DG L Sbjct: 1 MRSGLKLLLQKRPSLKVVGEASD---GLEALRLYDILRP-DILILDISLPRLDGIQVLTE 56 Query: 71 IKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTFF-PS 129 IK KV+ L+ + Y + AGA+G+V K +++ A+ ++ GY + P Sbjct: 57 IKLRYEQAKVIVLTMHEDEDYVTLIMNAGASGYVPKAAVDEELYTAIDSVMDGYLYLRPK 116 Query: 130 ETLNYIKSNKCSTNS-STVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHKSNI 188 E +K + T S + +LS RE +L++LV G S EIA +L +S KTV HK+ + Sbjct: 117 EISTMLKRLQNETESRNPYVILSPREREVLQFLVKGFSLSEIAQELTISIKTVDTHKTRM 176 Query: 189 YGKLGLHSIVELIDYAKLYELI 210 KL L EL+ YA Y LI Sbjct: 177 LNKLNLSKKSELVQYAIKYNLI 198 >UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 Tax=Methylococcus capsulatus RepID=Q60AR8_METCA Length = 215 Score = 102 bits (254), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 4/203 (1%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITID-YLRTRPVDLIIMDIDLPGTD 63 +V+++D H ++R +LL +++V + + Y TRP D+I+MD+ LPG Sbjct: 6 TVMLVDDHAVVRAGYRLLLSGTPNIEVVGEAERGEEACQLYADTRP-DVIVMDLSLPGIG 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++RI+ ++ ++L S E Y RA++AGA G+++K + AV I SG Sbjct: 65 GLASIRRIRSRDTSARILVFSIHDELIYVVRALEAGARGYITKSCAPEILVEAVARIASG 124 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTV--LSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 +F E + +T + LS RE + L G + +E+A++L L KTV Sbjct: 125 ESFLEPEIAQRLAMQTLGGAEATTALNTLSAREFDVFLLLAKGYTTREVAEELRLGYKTV 184 Query: 182 SAHKSNIYGKLGLHSIVELIDYA 204 + + + I KLG+++ E+ A Sbjct: 185 ANYSTLIKSKLGVNTTAEMARLA 207 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 102 bits (254), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 63/215 (29%), Positives = 113/215 (52%), Gaps = 13/215 (6%) Query: 1 MKPTS--VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDID 58 MKPT+ + ++D H I+R ++++L + + +I ++ D +D + DL+I DI Sbjct: 1 MKPTNTKIFLVDDHAILREGLKMIL--SGQFEICGESGDAEKALDQIGKLNPDLVITDIS 58 Query: 59 LPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQ 118 +PG G +K +++ ++ + LS Y + ++ G NG+V K + ND+ A++ Sbjct: 59 MPGLSGIDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAIE 118 Query: 119 MILSGYTFF-PSETLN----YIKSNKCSTNSSTV----TVLSNREVTILRYLVSGLSNKE 169 + G T+ P T + ++ S K + +VLS+RE IL+ + G SN+ Sbjct: 119 AVHKGETYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNES 178 Query: 170 IADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 I L +S TV H++NI KL LH + +L+ YA Sbjct: 179 IGKILGISPATVKVHRANIMKKLNLHKVADLVMYA 213 >UniRef50_B9JLI1 Two-component response regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLI1_AGRRK Length = 219 Score = 102 bits (254), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 112/210 (53%), Gaps = 8/210 (3%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +P + II D H I+R +++L+ + + IV + + +D +R+ DL+I+D+ +PG Sbjct: 3 RPFTAIIADDHAIVREGLKLLISAMTNVSIVAEAANGDTLLDLVRSTRADLLILDLGMPG 62 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G F+ I+ + +K+L L++ E A+ AGANG+++K D ++ A+ + Sbjct: 63 VAGIQFISDIRALAPRMKILVLTANIEPRTVRAALDAGANGYLTKDGDPEELDTAIDAVK 122 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVT-------VLSNREVTILRYLVSGLSNKEIADKL 174 SG T+ ++++ + ++ VT L+ RE +L G +++++A++L Sbjct: 123 SGKTYL-AKSIRFAVADPERLGKMPVTGEIVSPIPLTLRERQVLLLSAQGQTSRQMAERL 181 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 +S T H+ N+ KL LHS E+ YA Sbjct: 182 GISPLTARKHRENLMRKLNLHSTAEVTAYA 211 >UniRef50_A3K876 Two-component response regulator n=2 Tax=Rhodobacteraceae RepID=A3K876_9RHOB Length = 213 Score = 102 bits (254), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 103/204 (50%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M+ SVII+D HP++R L+ L+IV + +D R R D+++MD+ LP Sbjct: 1 MRDYSVIIIDDHPVVREGYRRLIDLQPGLKIVGEAEDARSAYAAFRDLRPDVVVMDVTLP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G G ++ I+Q +++ + +A +AI+AGA +++K +D + A+ Sbjct: 61 GASGIEAIRHIRQYDDGARIVVFTMHLSAAFALKAIKAGATSYITKSSDPKVLVEAIFGA 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 L G T + + I + S + ++ LS R+ IL L G S + IA +L +S KT Sbjct: 121 LRGQTVISPDVIEAIARDSISGIGTGLSDLSPRQTEILCLLARGWSAERIAGELSISQKT 180 Query: 181 VSAHKSNIYGKLGLHSIVELIDYA 204 V + I LGL + +L+ +A Sbjct: 181 VRNNHYQIKSILGLETDAQLVWFA 204 >UniRef50_D2R948 Two component transcriptional regulator, LuxR family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R948_9PLAN Length = 223 Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 5/211 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K V+I+D HP +R ++ + + + ++L++ + D + + D+ ++DI L Sbjct: 8 KRARVLIVDDHPAVREALALRIGRQTDLEVCGEAADLGEALRLVAETQPDVAVIDISLKT 67 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G +KRIK Q TV++L S+ SE YA RA+ AGA G+++K + I ++ +L Sbjct: 68 GCGIDLIKRIKDRQDTVRMLVWSTHSESLYAERALLAGALGYITKDQATDTIVEGIRRVL 127 Query: 122 SGYTFFPS---ETL--NYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 G + ET+ + + S + L+NRE+ + R + G IA +L L Sbjct: 128 EGKVYLSDAMVETMLRRTVGGEQKHLTRSPLDTLANRELEVFRLIGQGEKTTGIAKRLHL 187 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLY 207 S KTV ++ I KL L S EL YA + Sbjct: 188 SVKTVETYRDRIRQKLDLTSGTELAHYATTW 218 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 3/205 (1%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P V+++D I+R ++ + Q E++IV + + I +T D+I+MDI++P Sbjct: 7 PIRVLLVDDEDIVRYGLKAIAQGTPEIEIVGEAGSGKAAIAQAKTLQPDVILMDINMPQM 66 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG T + I +IQ KVL L++ E Y A+Q GA G++ K D ++Q Sbjct: 67 DGVTATQEISRIQPHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDFIQSIQQAHK 126 Query: 123 GY-TFFP--SETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 GY P + L + ++ RE +L+ + +G SN+EI++ L ++ K Sbjct: 127 GYLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISETLHITEK 186 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYA 204 TV H S+I ++G+ S +L +A Sbjct: 187 TVKNHVSSILSRVGVQSRTQLAIWA 211 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 59/199 (29%), Positives = 104/199 (52%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 +++++ H I+R + L+ E +IV + ++ + ++RT D+++MD+ +P DG Sbjct: 17 LLLVEDHHIVRRGLVFFLKTREEFEIVGEAENGEDALTFVRTERPDVVLMDLSMPKMDGI 76 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 K+IKQ T+K+L LSS SE Y A++AGA+G+ K + ++ I G Sbjct: 77 EATKQIKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIAIYEGNA 136 Query: 126 FFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHK 185 F + + + ++L+ RE +L+ + G SNKEIA +L ++ +TV H Sbjct: 137 NFHPKVTPALLGRSAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQTVKTHV 196 Query: 186 SNIYGKLGLHSIVELIDYA 204 SNI KL + + YA Sbjct: 197 SNILAKLEVDDRTQAALYA 215 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 107/202 (52%), Gaps = 4/202 (1%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 +++ D H + R ++ +L+K ++IV + + ID + +PVD+ +DI +PG +G Sbjct: 5 IVLADDHQMFRHALRAMLEKEPGIRIVGEASNGDELIDLISHQPVDIACVDIGMPGMNGI 64 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 +R+ I+ V+V+ LS+ S+ + + AGA G+V+K ++ A+ + T Sbjct: 65 EATRRLLAIRPHVRVIGLSAFSDRQFVLDLLNAGATGYVTKAEAGEELLRAIHTVQQSKT 124 Query: 126 FFPSETLNYIKSNKCSTNSS---TVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + + + +N N+ + ++ RE +L+ + G ++ IAD+L L+ TV Sbjct: 125 YLCPDVAATV-TNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRLHLAPSTVE 183 Query: 183 AHKSNIYGKLGLHSIVELIDYA 204 H+ NI KL LHS+ EL YA Sbjct: 184 VHRRNIMRKLDLHSVAELTKYA 205 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 5/206 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 T +++ D H I+R + LL+ S+ +I + D R + + D++I+D+ +P + Sbjct: 7 TRILLADDHDIVRRGLRTLLELRSDWEICAEASDGRAAVQFAEDLAPDIVILDLSMPELN 66 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +RI ++L L+ + A+ AG G++ K + D+ +AV ++ G Sbjct: 67 GLEAARRIAAHCPRSRMLMLTMHETEQFVREALAAGVRGYILKTDAGRDLANAVDALIRG 126 Query: 124 YTFFPSETLNYIKSNKCS-----TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 TFF S I + + + S + L+ RE IL+ L G N+++ L +S Sbjct: 127 ETFFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGKALNISV 186 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYA 204 KT H++ I KLG+ S+ +L+ YA Sbjct: 187 KTAETHRARIMAKLGIDSVADLVRYA 212 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 104/201 (51%), Gaps = 2/201 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 ++++D HP++R + +L+ +L +V + D + R D+++MD+ +PGTDG Sbjct: 4 ILVVDDHPVVREGLVAILEAQEDLTVVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGTDGV 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 ++ IK+I +V+ L++ +A+QAGA+G++ K + DIF AV+++ G + Sbjct: 64 QAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVVYRGGS 123 Query: 126 FFPSETLNYI--KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + + L+ RE+ +L + GL NKEIA +L ++ +TV Sbjct: 124 LLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITERTVKF 183 Query: 184 HKSNIYGKLGLHSIVELIDYA 204 H + IY KL + E + A Sbjct: 184 HANAIYRKLDVSGRTEAVSKA 204 >UniRef50_C5UZV9 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZV9_9PROT Length = 213 Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 110/207 (53%), Gaps = 3/207 (1%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 ++++D H +IR ++ LL+ +L+I + I LR P DL+++DI+LP G Sbjct: 4 ILVVDDHALIRKGLKQLLEDTPDLKITGEASSGTEAISMLRAAPFDLMLLDINLPDKHGI 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 LK+ K Q +K++ LS E Y RA++AGA G+++K + + + A++ +LSG Sbjct: 64 EVLKQFKSEQPQLKIIILSMYPEDQYGVRALKAGAMGYINKQSASDVLIKAIRHVLSGKK 123 Query: 126 FFPSETLNYIKSNKCSTNSSTV--TVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + SE L N S + LSNRE L + SG + EI+ + LS KTVS Sbjct: 124 YI-SEILAEQLLNNLIGESQELMHQNLSNREYQTLCLMASGKTLSEISQIMALSPKTVSV 182 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 ++S + K+ + E I YA + L+ Sbjct: 183 YRSRMLAKMTFTNNAEAIHYAITHRLV 209 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/197 (32%), Positives = 105/197 (53%), Gaps = 5/197 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M T V+I D H ++R + LL + ++++V + D + +D + D+++MDI +P Sbjct: 1 MAKTKVLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEAVDMVAQFKPDVVLMDIVMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G K IK+ + +L L++ S+ Y ++AGA+G++ K ++I A++ I Sbjct: 61 RLTGVEATKLIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAIRAI 120 Query: 121 LSGYTFFPSETL-----NYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 +G + S + +K S LS REV IL+ GLSN+EIADKL Sbjct: 121 KAGESVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIADKLT 180 Query: 176 LSNKTVSAHKSNIYGKL 192 LS +TV AH SNI+ K+ Sbjct: 181 LSMRTVKAHLSNIFNKM 197 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 5/204 (2%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V++ D H ++R + LL ++QIV + R + + D+I+MDI +P +G Sbjct: 33 VLLADDHTVVRQGLRALLSGEKDIQIVGEAGTGREAVQMAQKLTPDVILMDIAMPLMNGL 92 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 ++I ++ + KVL LSS E Y + +AGA+G++ K ND+ AV+ G Sbjct: 93 EATRKIAEVAPSAKVLVLSSYGEDDYVQKLTEAGASGYLIKHAAANDLVAAVRETHKGNA 152 Query: 126 FF----PSETLNYIKSNKCSTNSSTVTV-LSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 FF + +++ + N + + L+ RE+ L ++V+G NK IA + +S KT Sbjct: 153 FFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGKPNKVIACDMGISIKT 212 Query: 181 VSAHKSNIYGKLGLHSIVELIDYA 204 V H+ + KL +H + L YA Sbjct: 213 VEKHRQQVMNKLNIHEVASLTRYA 236 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 8/207 (3%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYL-----RTRPVDLIIMDI 57 P V+++D H ++R + + L +L +V + D + +L R RP DL+I DI Sbjct: 18 PARVLLIDDHALVRDGMRMHLTLQPDLYVVGEADGGEAALAWLERAGARERP-DLVITDI 76 Query: 58 DLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAV 117 + G G + + + VL +S YA +A++AGA G+V K +++ A+ Sbjct: 77 GMRGMGGIALTAALHEQYPEIAVLVVSMHDNLEYARQAVRAGARGYVLKDAPADELMAAI 136 Query: 118 QMILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 + +L+G F+ + + +T + L+ RE IL + G++NKEIA +L +S Sbjct: 137 EAVLAGRVFYSARIARGMAEQMPATGP--LDALTRRERDILGCIGRGMANKEIATQLGVS 194 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYA 204 +TV H+ N+ KLG+ L+ YA Sbjct: 195 VRTVETHRLNLKRKLGIEGRAGLVKYA 221 >UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeobacter violaceus RepID=Q7NN43_GLOVI Length = 217 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 102/192 (53%), Gaps = 5/192 (2%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYL-RTRPVDLIIMDIDLPGTDG 64 V++++ P+ RM + ++L+ ++++V + +D + R RP L+++DI LPG DG Sbjct: 7 VLLVEDDPLFRMGLAMVLRHQPQIELVAEAEDGETALALANRHRP-QLVLLDIGLPGLDG 65 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 L R+KQ ++VL L+S+ E +QAGA+G+ K + + ++ + +G Sbjct: 66 RQTLVRLKQEHPEIRVLVLTSREEAGLVQAMLQAGADGYCLKGIGPDRLLTVIREVSAGN 125 Query: 125 TFFPSETLNYIKSN---KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 +F ++ L ++S S + L+ RE +L ++ G SN EI +L +S+ TV Sbjct: 126 GWFDAKVLAQVRSAFAVAPSEPPANAAALTEREREVLGWIARGASNPEIGRQLHISSGTV 185 Query: 182 SAHKSNIYGKLG 193 H I KLG Sbjct: 186 RVHVHAILRKLG 197 >UniRef50_Q0K3Q8 Response regulator, NarL-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0K3Q8_RALEH Length = 219 Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 5/202 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 PT V + D H I+ ++ +L L + + D + L P DL++MD+ +PG Sbjct: 7 PTRVALADDHAIVLEGLKQVLSGVGNLVLAGEAADGAQLLGLLERVPTDLLVMDLGMPGV 66 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG F++R++ +++L L+ + A AI AGANG++ K D +++ A+ + Sbjct: 67 DGLAFVERLRTRHPALRILVLTGSAGAGMAHAAIDAGANGYLVKSGDISELVPALMALRE 126 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G F + + + + L+ RE+ IL + G + +IA +L +S T Sbjct: 127 GRNF-----VAARATAPATAAPDGIATLTRRELQILMLIARGATAGDIAAQLDISPLTAR 181 Query: 183 AHKSNIYGKLGLHSIVELIDYA 204 H+ N+ KL LH+ E++ YA Sbjct: 182 KHRENLMRKLDLHNTAEVVAYA 203 >UniRef50_D1BCA8 Two component transcriptional regulator, LuxR family n=18 Tax=Bacteria RepID=D1BCA8_SANKS Length = 234 Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 11/214 (5%) Query: 2 KPT-SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 +PT V++ D HP++R I +L S++++V + +D R +D RT D++I D+ +P Sbjct: 26 RPTVRVVVADDHPVVRAGIVGMLGVESDIEVVGEAEDGRQAVDLARTLSPDVVITDLRMP 85 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 DG + I + TV+V+ L++ RA++AGA G++ K + ++ ++ Sbjct: 86 VLDGVGATREIVALPGTVRVVVLTTYETDGEILRAVEAGATGYLLKDTPRAELVAGIREA 145 Query: 121 LSGYTFF-PSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 G T PS + + S S L+ REV +LR + GLSN + +L +S Sbjct: 146 ARGQTVLTPS-----VATRLVSQVGSRADRLTPREVEVLRAVARGLSNAAVGHELFISET 200 Query: 180 TVSAHKSNIYGKLGL----HSIVELIDYAKLYEL 209 TV H +GKLG+ H++ D L ++ Sbjct: 201 TVKTHLIRAFGKLGVNDRTHAVTVATDRGLLGQV 234 >UniRef50_C2FYZ7 Transcriptional regulator n=2 Tax=Sphingobacterium spiritivorum RepID=C2FYZ7_9SPHI Length = 212 Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 113/207 (54%), Gaps = 5/207 (2%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 ++I D H I+R+ V+++ E + + DY L DL+++DI++PG + Sbjct: 4 ILIADDHSIVRLGASVIIKGVIENANITQAQDYSEITKLLDANRYDLLLLDINMPGGNNI 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 + I Q+ +K+L SS E YA R I+AGA G+++K +++ +A+Q I+S Sbjct: 64 KVIHEILAKQNDLKILVFSSYDESLYALRYIEAGAVGYLNKNTAMSELGNAIQCIISRGK 123 Query: 126 FFPSETLN-YIK----SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 + + Y+K S ++ + LSNRE+ + ++L GL E++++L LS T Sbjct: 124 YMSDVVTDLYLKKLTQSKSSLQKANPLAKLSNREMDVAKHLTQGLGILEVSNELKLSAST 183 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLY 207 +S +KS ++ KLG+ +I ELI L+ Sbjct: 184 ISTYKSRVFEKLGVTNIPELIQLFNLH 210 >UniRef50_B1Y7F6 Two component transcriptional regulator, LuxR family n=2 Tax=Burkholderiales Genera incertae sedis RepID=B1Y7F6_LEPCP Length = 224 Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 109/211 (51%), Gaps = 6/211 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYL---RTRPVDLIIMDIDL 59 P + + D H I+R+ LL+ +L +V + D L R VDL+I+D+ + Sbjct: 16 PWRIALADDHAIVRVGYRRLLELEPDLSVVAEYADADSAAADLCQARRTAVDLLILDLSM 75 Query: 60 PGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 PG G L+++++ + +KVL +S G+ + AGA GFV+K +D + AV+ Sbjct: 76 PGRSGLDLLRQLQRDRPALKVLMVSMHDSAALVGQCLGAGACGFVAKSSDPQALIGAVRQ 135 Query: 120 ILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 L G +T + L+ RE+ +L+ L++GL + A ++ LS K Sbjct: 136 ALRGEVV---DTHGPSAPPRAGRRPLPHEQLTGRELEVLQLLLAGLGVEVAAARIGLSEK 192 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TVS +++ I KLG+ + +EL+ YA+ + L+ Sbjct: 193 TVSNYQTQIRQKLGVANSIELVHYARQHGLM 223 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 5/207 (2%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V + D HPI+ I LL + E+++V + + + D+ ++D+ +PG +G Sbjct: 7 VALADDHPIVLAGIRTLLNADPEIELVGEATSGSEALPMIHAADPDVAVVDVSMPGLNGL 66 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 +R+ +VL L+ + Y ++AGA G++ K + D+ AV+ + +G Sbjct: 67 ELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAVRAVAAGGI 126 Query: 126 FFPSETLNYIKSNKCSTNSS-----TVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 + ++ ++ + + LS RE +LR + G SNKEIA + LS K+ Sbjct: 127 YLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARRFDLSVKS 186 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLY 207 + +K+ KLGL + E+I YA + Sbjct: 187 IETYKARAAEKLGLRTRAEIIRYAAAH 213 >UniRef50_C5V4R9 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=C5V4R9_9PROT Length = 211 Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 2/206 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTR-PVDLIIMDIDLPGTDG 64 ++I D H I+R I+ +L ++Q+ + D + +L D++++D+ +PG G Sbjct: 4 LLIADDHAIVREGIKKILALAQDIQVEAEAVDAIEVMKHLDDGVTFDVLLLDLSMPGVTG 63 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 + + +IK +L S +E A RAI+AGA GF++K +D + A++ + +G Sbjct: 64 MSLITQIKAQYPAFPILIFSMHNEAQIASRAIKAGAAGFIAKDSDPEILLEAIRRVAAGR 123 Query: 125 TFF-PSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + P+ S+ +LS+RE+ I LV+G +IA L +SNKTVS Sbjct: 124 NYIDPALAEQMAFDALMPPKSAPHAILSSRELEIFALLVAGKRVNDIAYILNISNKTVST 183 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYEL 209 HK N+ K+ LHS +L+ YA ++L Sbjct: 184 HKLNLITKMKLHSTADLVHYALEHKL 209 >UniRef50_C0EEH8 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EEH8_9CLOT Length = 206 Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/190 (30%), Positives = 102/190 (53%), Gaps = 1/190 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 VI+ D PII + ++L+ ++ + ++ ++ RT+ D++++DI +P DG Sbjct: 5 VILADDDPIICQGLRMILETQQDIALCGVAENGVQAVELCRTQRPDVVLLDIRMPLLDGI 64 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 +I Q+++ L L++ E + RA++ G G++ K + I AV+ + G T Sbjct: 65 EAAAQIMQMEAGAP-LLLTTFDEAEFILRALKTGVRGYILKNSPAQRILTAVRAVAEGGT 123 Query: 126 FFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHK 185 F + L YI+ + + ++L+ RE+ ++ + GLSNKEIA++L LSN TV H Sbjct: 124 VFQQDILEYIRDRTVFPDHTIFSLLTPREMEVVALIAEGLSNKEIAERLFLSNGTVRNHI 183 Query: 186 SNIYGKLGLH 195 S I K GL Sbjct: 184 SVILEKTGLE 193 >UniRef50_B7AAT6 Two component transcriptional regulator, LuxR family n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAT6_THEAQ Length = 207 Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 59/199 (29%), Positives = 103/199 (51%), Gaps = 1/199 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V++++ H ++R + LL+ +++V + R ++ L D+ I+D+ LP G Sbjct: 4 VVLVEDHLLVRSGLRHLLEARGPVRVVGEAGSCREALELLEKVQADVAILDVSLPDGTGI 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 +R+++ +++L LS + Y +QAG G+VSK ++ AV + G Sbjct: 64 ALCQRLRERFPELRLLALSMHEDLEYVRGFLQAGGQGYVSKAAVDQELLDAVLAVARGER 123 Query: 126 FFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHK 185 + + L + + S+ LS RE +LR L GLS+KE+A+KL +S KTV+ ++ Sbjct: 124 YL-NPALAMRLAMELVRESAEEAPLSPREEEVLRLLAQGLSHKEVAEKLGISEKTVATYR 182 Query: 186 SNIYGKLGLHSIVELIDYA 204 KLGL S EL+ YA Sbjct: 183 ERGMEKLGLASRSELLRYA 201 >UniRef50_C4XMF2 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMF2_DESMR Length = 218 Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 116/221 (52%), Gaps = 15/221 (6%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRT----RPVDLIIMD 56 M ++I+D HP+ R ++ +L+++ + + Y + LRT RP DL ++D Sbjct: 1 MPSKRLLIVDDHPLFREGLKAILRRDPSYAVAGEAGSY---AEALRTAKDCRP-DLAVLD 56 Query: 57 IDLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHA 116 I LP G + ++Q+ ++ +L +S ++ Y A++ GA G+++K +++ Sbjct: 57 ISLPDRSGIQLARELRQMLPSLGILMVSMHAKVDYVAEALKVGALGYLTKDAATDNLLSG 116 Query: 117 VQMILSGYTFF-PSETLNYIKSNKCST------NSSTVTVLSNREVTILRYLVSGLSNKE 169 ++ + +G + P+ ++ +S T + S L+ RE ++R +V GLSNKE Sbjct: 117 LRAVAAGQPWLDPTLSVEISRSLLAKTPRAEEESHSAYDSLTPREREVMRLVVEGLSNKE 176 Query: 170 IADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +A L +S KT H+ ++ KLG+ + VEL+ YA LI Sbjct: 177 VAAALEISVKTAEHHRGSLMRKLGMQNSVELVRYATKLGLI 217 >UniRef50_Q5MJZ1 Nitrate/nitrite regulatory protein n=1 Tax=Methylophaga aminisulfidivorans RepID=Q5MJZ1_9GAMM Length = 226 Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 56/209 (26%), Positives = 116/209 (55%), Gaps = 7/209 (3%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P SV+++D HP+ R + LL + E+ ++ + D+ +D + D++++D+ +PG Sbjct: 5 PISVVVVDDHPLFRRGVVELLNDSEEMTVIAEYDNAEALLDNIENTYPDILLLDMQMPGK 64 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G LK++++ + +K++ +++ +E A++ GANG++ K ++I + +L Sbjct: 65 SGLGVLKQLREHDNQLKIIIITACNEQDKLLEALRYGANGYLQKDTPPDEILSQLMSVLH 124 Query: 123 GYTFFPSETL----NYIKSNKCSTNSSTVTVLSN---REVTILRYLVSGLSNKEIADKLL 175 G + + ++++ NK N+ + +LS+ RE L Y+ GL+NK IA +L Sbjct: 125 GNVAMNAGAVTSLASHLRENKDDENNPSSAILSHMTERERETLFYIAKGLNNKLIARELG 184 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 +S+ TV + ++ K+ LHS +EL +A Sbjct: 185 ISDGTVKVYVKSLLRKVNLHSRLELAAWA 213 >UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10 Tax=Proteobacteria RepID=Q1GZT3_METFK Length = 215 Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 1/200 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V+I D H I+R ++ +L + ++++V + I T+ +D++++DI LP G Sbjct: 9 VVIADDHAILREGLKQILAETEDIEVVADAKNAAEAIKLAGTKGLDVVVLDISLPDRSGI 68 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 IK+ V VL LS E YA RA++AGA G++SK + + + A++ + G Sbjct: 69 EACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAVGYLSKQSASDQLVTAIRTVAKGKK 128 Query: 126 FFPSE-TLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 + +E L LSNRE L + SGLS EIA+ L LS KTVS + Sbjct: 129 YISAEVALALADQVSGGLEKPIHDTLSNREFQTLTMIASGLSVSEIAENLSLSVKTVSMY 188 Query: 185 KSNIYGKLGLHSIVELIDYA 204 ++ + KL L EL YA Sbjct: 189 RARLLEKLNLRHNAELTHYA 208 >UniRef50_Q4V0G8 Two-component system regulatory protein n=4 Tax=Xanthomonas RepID=Q4V0G8_XANC8 Length = 210 Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 2/194 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M + + D ++R ++ LLQ+ + +V + DD + +D L T VD+++ DI +P Sbjct: 1 MSALRIALADDQVLVRAALRALLQQQG-ITVVCEADDGQALLDALATHNVDVVLSDIRMP 59 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G DG L++++ VL L++ + RA +AGA GF+ K +D+ A+ + Sbjct: 60 GLDGIAALEQLRARGDRTPVLLLTTFDDSELLLRACEAGAQGFLLKDAAPDDLHEAIARV 119 Query: 121 LSGYTFFPSETLNYIKSN-KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 +G T + + +++ + + + REV ILR L G SNKEIA L L+ Sbjct: 120 AAGETLLQPVSTDPVRARYQFRDQQAPRETFNEREVAILRLLAGGYSNKEIARTLFLAEG 179 Query: 180 TVSAHKSNIYGKLG 193 TV + S I KLG Sbjct: 180 TVKNYVSTILDKLG 193 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 62/204 (30%), Positives = 108/204 (52%), Gaps = 11/204 (5%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 ++I + ++R + LL + ++ IV + +D + I+ RT D+++MD+ +P DG Sbjct: 5 ILIAEDQQLVRQGLVALLAVD-DVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMPELDGV 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 +RIKQ+ V+VL L+ + A+ AGA+G+ K ++ A+ + +G T Sbjct: 64 EATRRIKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLGHGELMAAINAVCAGKT 123 Query: 126 FFP---SETL--NYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 + SE L Y++ + S L+ RE +L+ + G N+EIAD+L ++ KT Sbjct: 124 YLGPGLSEDLVKEYLEGSDMGGGS-----LTAREREVLQLIARGHKNREIADELGIAIKT 178 Query: 181 VSAHKSNIYGKLGLHSIVELIDYA 204 V H++ I KL LH+ EL YA Sbjct: 179 VETHRTKIMQKLDLHNSAELAAYA 202 >UniRef50_C6VTD0 Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VTD0_DYAFD Length = 212 Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 116/208 (55%), Gaps = 5/208 (2%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 +++I++ + IIR++ ++L+Q + + + + + L R DL+I+DI +P G Sbjct: 3 NILIVEDYQIIRLATKILVQDLYKEATIHEAGTFGAALAALTARMHDLVILDIQIPEGQG 62 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI-LSG 123 F + ++ +Q V +L S+ E Y +++GANGF+SK D ++I A++ + +G Sbjct: 63 FEMIAALRAVQKNVPILIFSAIEERIYGIHYLRSGANGFISKSADTDEILAAIRSVSETG 122 Query: 124 YTFFPS---ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 P E LN + + +++ + LS RE+TI+ L+ G KEIA KL L+ + Sbjct: 123 RYVSPRIKVELLNQLDKHNYQSDNPLLD-LSAREITIMDMLIEGFWIKEIASKLDLTESS 181 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYE 208 VS +K+ ++ KL + +++E+ + Y+ Sbjct: 182 VSTYKARLFEKLQVTTLIEMFQKVRHYK 209 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 7/205 (3%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V++++ H I+R ++ LL +L++V + D R ++ D+++MDI++P DG Sbjct: 7 VLLVEDHTIVREGLKALLTATEDLEVVGEVADGRAAVEAAERLAPDVVVMDINMPKLDGV 66 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 + I++ + +VL LS Y AI+AGA+G++ K + +D+ A++ + G Sbjct: 67 GATREIREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIREVAGGNA 126 Query: 126 FFPSETLNYIKSNKCSTNSSTVTV------LSNREVTILRYLVSGLSNKEIADKLLLSNK 179 FF S T+ I + S L+ RE +L + G S+ EIA L LS K Sbjct: 127 FF-SPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKILGLSVK 185 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYA 204 T+ H+ I KLG+H++ L+ A Sbjct: 186 TIEGHRGRIMAKLGVHNVAGLVRQA 210 >UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1H354_METFK Length = 213 Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 100/199 (50%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 ++++D H ++R + LL++N ++++ + D + D+I+MD+ +PG G Sbjct: 7 IMLVDDHEVVRSGLRRLLEQNDGVEVIAEADSGEQAYQFYGEHMPDVIVMDMSMPGMGGL 66 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 L+RI +V+ S +A +A+ AGA +V+K +D+ AV+ + G Sbjct: 67 EALRRIIARYPQARVIIFSMHENAAFASQALGAGARAYVAKSGAADDLVQAVREVAQGKG 126 Query: 126 FFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHK 185 + I S + +LS RE + R L +G +EI+ L +S KTV+ ++ Sbjct: 127 YLSPGIAQQIALQTLSGSDDPTRLLSAREFEVFRLLAAGKGVEEISTILKISQKTVANYQ 186 Query: 186 SNIYGKLGLHSIVELIDYA 204 + + KLG+ S +EL+ A Sbjct: 187 TLLKQKLGITSPIELVRLA 205 >UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W2Z0_DYAFD Length = 205 Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 108/205 (52%), Gaps = 4/205 (1%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 ++I+D HP++ ++ LL +Q+V + I +L+ VD+ +DI+LP G Sbjct: 5 ILIVDDHPLVLEGLKSLLADAEGVQVVGTATNAIEAIAFLKGNEVDIAFLDINLPDISGI 64 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 K++K VK L LS+ +E Y R IQ GA+G++ K + + DI A+ + +G Sbjct: 65 DLCKKVKDQFPEVKTLALSTFNERAYVSRMIQNGASGYLIKSSGKEDILEAIAQVQAG-G 123 Query: 126 FFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHK 185 +F + + + +T TV L+ RE +L + GL+N +IA++L +S TV++H+ Sbjct: 124 YFMNVQFDQVTP---ATAPKTVPFLTRREKEVLVLIAEGLTNPQIAEQLFISVTTVNSHR 180 Query: 186 SNIYGKLGLHSIVELIDYAKLYELI 210 N+ K + + LI A LI Sbjct: 181 QNLLIKFEVSNTASLIKLAAGLGLI 205 >UniRef50_Q11XC0 Fimbrial Z protein; probable signal transducer n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11XC0_CYTH3 Length = 212 Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 113/204 (55%), Gaps = 1/204 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M V I+D + +IR ++ L++NSE++IV +++ ++T D++I +++L Sbjct: 1 MDKIKVYIVDDYYLIREGVKKSLKQNSEIEIVGESNSLSDLATSIKTSQPDVLIFELNLC 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 ++ +K++ + VK L +S A++AG GFV K + ++ HAVQ + Sbjct: 61 QQPIRDLIENLKKVNARVKFLIISDCDCELPLVMAVRAGVTGFVRKNVSKEELLHAVQQV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 + ++ S+ + + N ++ ++ S+RE+ +LRY+ G SN++IAD L +S KT Sbjct: 121 YTNKEYYVSDVTQVLLKGFLA-NQTSDSIFSDRELEVLRYICKGRSNEQIADILFISEKT 179 Query: 181 VSAHKSNIYGKLGLHSIVELIDYA 204 ++ H+ NI K G+ ELI +A Sbjct: 180 IATHRRNIMKKAGVKKSTELIVWA 203 >UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM Length = 206 Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 62/199 (31%), Positives = 105/199 (52%), Gaps = 2/199 (1%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 +I+ D H I R + LL + EL+IV + + +R D+ ++DI +PG +G Sbjct: 4 IIMADDHTIFRQGLAHLLSAHQELEIVGEAGRGDDALQLIRDLNPDVALLDISMPGLNGL 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 +KR+ + + ++L L+ + A +A QAGA G+V K N +++ A+ + +G Sbjct: 64 DVVKRVVEEKRPTRLLLLTMHDDPTLAIKAEQAGALGYVVKDNAFSELLDAILAVAAGKR 123 Query: 126 FFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHK 185 F SE + K N+ LS RE ++R + G +NKEIA L +S KTV H+ Sbjct: 124 FV-SEVVAE-KVNELERLDDLPVQLSPREKEVVRLVADGQTNKEIARSLGISPKTVDTHR 181 Query: 186 SNIYGKLGLHSIVELIDYA 204 + + KL LH+ +++ YA Sbjct: 182 TRLMRKLNLHTTADVVRYA 200 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 111/211 (52%), Gaps = 17/211 (8%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDL-PGTDG 64 V+++D H ++R + LL++ ++++V +T + ++++MD+ L G +G Sbjct: 5 VMLVDDHALVREGLRALLEREGDIEVVGETGSAAGVLALAEESRPEVVVMDLQLGAGRNG 64 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 + + + + +KV+ LS + RA+++GA G+V K ++ A++++ G Sbjct: 65 VEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLVARGE 124 Query: 125 TFFP-----------SETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADK 173 + E L + ++++ L+ RE+ +LR GL+N EIA + Sbjct: 125 AYLDPQIARRVIEGLQERLPFTRASRPEGPE-----LTERELEVLRLAAEGLTNAEIARR 179 Query: 174 LLLSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 L++S KTV AH++NI KLGLH V+L+ YA Sbjct: 180 LVISVKTVQAHRANIMQKLGLHDRVDLVKYA 210 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 52/205 (25%), Positives = 105/205 (51%), Gaps = 3/205 (1%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P V+I D H ++R + +L + +++V + + R +D D++++DI +P Sbjct: 10 PIRVLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVPDVVVLDITMPEE 69 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G R+++ +VL LS + Y ++ G +G++ K + ++ A++ + + Sbjct: 70 SGLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIRAVHA 129 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVT---VLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 G TFF + + S + + + +L+ RE +L + GL+NK IA +L +S + Sbjct: 130 GGTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELGISRR 189 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYA 204 TV AH+ ++ KL +HS+ L +A Sbjct: 190 TVEAHRESLMRKLQIHSVAGLTRFA 214 >UniRef50_Q0A525 Two component transcriptional regulator, LuxR family n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A525_ALHEH Length = 214 Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 4/202 (1%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P +++++D H ++R LL++ S V + D D+++MDI LPG Sbjct: 9 PLTLLLVDDHAVVRAGYRRLLEQASRCWQVTEADSGESAYRACARERFDVVVMDISLPGI 68 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G L R+++ ++VL S E +A +A+ GA G+++K + + AVQ I + Sbjct: 69 SGLETLARLQRRAPEIRVLIFSMHEEPVFAEQALSGGAAGYITKSSAPEVLVEAVQRIAA 128 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G + + ++ +++ + LS RE I R L G + EIA L +S KTV+ Sbjct: 129 GGHYLGPD----VRCRHGDADTAGLQSLSAREFEIFRLLAEGCGSAEIARLLNISYKTVA 184 Query: 183 AHKSNIYGKLGLHSIVELIDYA 204 + S I KL L+++ E+ A Sbjct: 185 NYGSGIREKLALNNVAEMTRLA 206 >UniRef50_Q6AMC3 Related to two-component system response regulator (Nar family) n=1 Tax=Desulfotalea psychrophila RepID=Q6AMC3_DESPS Length = 221 Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 5/209 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 T ++I+D HPI RM + LL + + + ++ + D+ I+DI L G + Sbjct: 3 TQIMIVDDHPIFRMGMAELLNQEDDFCVCAVAENIAGARRAIAEHKPDMAIVDITLAGDN 62 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +K I + VL LS E +A RAI+AGA G++ K + A++ I G Sbjct: 63 GLDLVKEITAEKLCSAVLVLSMHDEAVWAERAIRAGAKGYIMKREASESVISALRNIREG 122 Query: 124 YTFFP----SETLNYIKSNKCSTNSS-TVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 S L+ NK + TV +L++RE+ + R + SGL +EIA+++ L Sbjct: 123 RLHVSPNMMSLLLDKFHVNKADNQGAPTVDLLTDREIEVFRLIGSGLPTREIAEQMCLGV 182 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLY 207 KT+ ++ I KL + + ELI A L+ Sbjct: 183 KTIGTYRDRIKQKLCIKTGAELIRRAVLW 211 >UniRef50_A6GQJ8 Two component transcriptional regulator, LuxR family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GQJ8_9BURK Length = 207 Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 112/210 (53%), Gaps = 11/210 (5%) Query: 6 VIIMDTHPIIRMSIEVLL-----QKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 ++I+D H IIR + +L Q +SE + D + LR D +++D+ L Sbjct: 3 ILIVDDHMIIRRGLVQILDEFDGQYHSE-----QAADGVEAMQKLRKDNFDAVLLDVALG 57 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 DGF LK ++ + V+ LS E +A RAI++GAN +++K ++ A+QM Sbjct: 58 ERDGFDVLKSVRSEFPKLGVVMLSVYPEAQFALRAIRSGANAYLNKGCSPAELTQALQMA 117 Query: 121 LSGYTFFPSETLNYIKSN-KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 +G + T N + ++ + + LSNRE+ +LR + G + + IA L LS Sbjct: 118 CAGQVYLTPATANLMANDLRKPADRPPHERLSNREMQVLRLMAQGETVQHIAQALCLSGN 177 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 TVS +++ ++ KL L ++V+L++Y KL+ L Sbjct: 178 TVSTYRARVFEKLELKNLVDLVNYTKLHGL 207 >UniRef50_Q3KF50 Putative LuxR family Two Component Transcriptional Regulator n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3KF50_PSEPF Length = 209 Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 2/202 (0%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 S +I+D HP++ ++ ++L+ I + + + LR L+++D+ L G G Sbjct: 3 SALIVDDHPVVVGALRLVLESAGYTPIHVTGRGVDV-VPMLREHAPKLVVLDLKLDGFGG 61 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 L RI+ + V+ +S Y R +AGA FV+K + +A++ + SGY Sbjct: 62 LEVLARIRAVGLVCNVVIFTSADPEHYLMRCRRAGAMAFVAKSASMQHLQNAIKAVRSGY 121 Query: 125 TFFPS-ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 T+FP +N +S + +LS RE+ I+ L G SNK IA + LS+KT+S Sbjct: 122 TYFPEMPVVNTGQSEAHRDERELIALLSTREMEIMLKLARGESNKHIALAMNLSHKTIST 181 Query: 184 HKSNIYGKLGLHSIVELIDYAK 205 +K+ + KLG+ S+V L ++ K Sbjct: 182 YKTRLMLKLGVSSLVVLREFVK 203 >UniRef50_C6X598 Two-component response regulator n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X598_FLAB3 Length = 226 Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 106/205 (51%), Gaps = 6/205 (2%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 ++I+D H ++ ++ LL+ + V + T+D+L +D+I+MD+++P + G Sbjct: 12 ILIVDDHQLMIEGLKSLLEDEDSISFVAGATTMKETLDFLAEHEIDVILMDVNMPDSSGI 71 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 K+++ + KV+ L+ + + I+AGA+G+V K + +++ A++ + Sbjct: 72 EITKKVRALYPHPKVIALTMHEDISIISKMIKAGASGYVLKRTNMHEVIDALKTVHQNGR 131 Query: 126 FFPSETLNYIKSN------KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 + + N I N VLS RE+ +L+ + SN++I ++L +S + Sbjct: 132 YLSTSVQNVIMDNLMLPEDLMDAKDDNKPVLSGRELEVLKLIAKEFSNEQIGEQLFISER 191 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYA 204 TV AH+ NI+ K SIV LI YA Sbjct: 192 TVEAHRRNIFMKTKTKSIVGLIKYA 216 >UniRef50_Q3SG39 Two Component Transcriptional Regulator, LuxR family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SG39_THIDA Length = 221 Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 5/208 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M T +I++D H + R + LL+++ E+++ T + L+ D++I+D+++P Sbjct: 1 MSLTRIILVDDHTLFRKGLAELLEQSGEIEVTAFTGNPDEVAMLLKAHRPDVLILDLNMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLS-SKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 GTDG T +++++ + +L L+ S++E A RA++AGANG++ K + +++ A+ Sbjct: 61 GTDGITLMQQLRNAGFALPILILTLSETEDDLA-RALRAGANGYLLKSMEPDEVVDAILR 119 Query: 120 ILSGYTFF-PSETLNYIK--SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 G T P+ T +K K S + L+ RE IL +L G SNK IA L + Sbjct: 120 AQRGETVVAPAMTAKLVKLYDQKGQDAGSLLDALTPREREILSHLSRGESNKAIARTLDI 179 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYA 204 S+ TV H +I KL L S VE +A Sbjct: 180 SHDTVKLHVRHILAKLNLSSRVEAAVFA 207 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/209 (26%), Positives = 108/209 (51%), Gaps = 6/209 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K +++ D H ++R ++VLL +L+++ + D ID + DL+++D+ +P Sbjct: 3 KKLRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMPK 62 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G ++ + + + +K+L L+ + Y +Q GA G+V K ++ A++ + Sbjct: 63 LNGVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTVA 122 Query: 122 SGYTF-FPSETLNY-----IKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 G F +P+ + + + S + LS RE+ +LR L G +N++IAD L Sbjct: 123 RGEMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADLLH 182 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 +S KTV +K+ + KL +H EL+ YA Sbjct: 183 VSVKTVETYKARVMEKLEMHKRAELVRYA 211 >UniRef50_B6JD38 Two component transcriptional regulator, LuxR family n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JD38_OLICO Length = 210 Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 107/208 (51%), Gaps = 2/208 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 T +II D H I R + +L + ++ +V + + + LR P D++++D+ +PG Sbjct: 2 TRIIIADDHTIFREGLRQILAEANDFTLVGEATNGDDLLVRLREAPCDIVLLDLSMPGIS 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G T ++ ++I +++ LS E Y A++AGA+G+V+K + + + A++ + G Sbjct: 62 GITLVRAAREIAGAHRIIVLSMHEEHQYVVEALKAGADGYVTKNSASDQLIAAIRKVSQG 121 Query: 124 YTFFPSETLNY--IKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 F + ++ + S T L+ RE + LV+G IA L LS KTV Sbjct: 122 ELFVSAAASQEAILREMRTSPTELPHTRLTRREREVFDMLVAGHKISRIARDLDLSIKTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYEL 209 S HK+N+ K+ + +L+ YA ++L Sbjct: 182 STHKTNLLAKMDAETTADLVRYALRHDL 209 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/212 (27%), Positives = 107/212 (50%), Gaps = 7/212 (3%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P +I++D H +IR ++L++ + ++V + R I+ R D+++MD+ +PG Sbjct: 10 PVRLIVVDDHDLIRAGFRLVLEQEPDFEVVGEASSGREAIELCRRLRPDVVVMDLAMPGV 69 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG +RIK+ V VL +++ + Y A++AGA G+V K + + A++ +LS Sbjct: 70 DGLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPRVISALRRLLS 129 Query: 123 GYTFFPSETL-----NYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 G + E + + N L+ RE +L + G +N EIA +L++S Sbjct: 130 GESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIARELVIS 189 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 T +H NI KLG+ + + A+ +EL Sbjct: 190 RGTAKSHVQNIIRKLGVSDRTQAV--ARAFEL 219 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 11/209 (5%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVL-KTDDYRITIDYLRTRPVDLIIMDIDLP-GTD 63 ++I D H ++R ++L ++++V D L RP D++I+D+ +P G Sbjct: 3 IVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRP-DVLILDLSMPPGES 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +I + K+L L+ + Y +++GA G++ K + + AV+ + G Sbjct: 62 GLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVYQG 121 Query: 124 YTF--------FPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 T+ +E +N ++++ S++S +LS RE+ IL + G NK+IA+KL Sbjct: 122 ETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEKLF 181 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 +S KTV AHK++I KL L S EL++YA Sbjct: 182 VSVKTVEAHKTHIMTKLNLKSKPELVEYA 210 >UniRef50_C0N6J7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6J7_9GAMM Length = 168 Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 53/154 (34%), Positives = 85/154 (55%) Query: 51 DLIIMDIDLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQ 110 D++++DI LPG G L+RI+ + KVL S + +A RA+QAGA G+++K N Sbjct: 8 DMVLLDITLPGVGGLEVLRRIRANREDAKVLMFSMHEDPVFASRAMQAGARGYITKNNAA 67 Query: 111 NDIFHAVQMILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEI 170 + + AV+ +L G + + + +S ++ LS RE+ ILR L G S EI Sbjct: 68 DHLVEAVEKVLDGKIYLSPDMAQQLAMLNIDAGTSALSDLSRRELEILRLLGEGKSMNEI 127 Query: 171 ADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 +D L +S KTV+ + + I KL + EL+ +A Sbjct: 128 SDVLGISYKTVANNLTQIKSKLDISKTAELMRFA 161 >UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C48EF Length = 220 Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 3/204 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M T +++ D H I+R + L+ +L++V + T+D +R ++ +D+ +P Sbjct: 1 MPRTRIVLADDHVILREGLRALISAQPDLEVVGEAASGTETVDCVRATEPRVLCLDLSMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G T + R+ Q+ +VL L+ ++ Y A+ AGA G+ K D+ A++ + Sbjct: 61 GWGSATTITRVTQLAPRTRVLVLTMHNDPAYVRSALAAGAAGYFLKTTPSPDLLAAIRAV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 +G + + S LS RE +L LV GL+++EIAD+L LS KT Sbjct: 121 ATGARVIDPALGDVLGGPPPPAERSQ---LSRRETEVLELLVKGLTHQEIADQLFLSVKT 177 Query: 181 VSAHKSNIYGKLGLHSIVELIDYA 204 V +++ + K GL + + + Y Sbjct: 178 VETYRARLREKTGLKTRADYVRYG 201 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 5/214 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K V++ D HP++R + L ++IV + D + T+ +R ++++MD+D+P Sbjct: 17 KTIKVLLADDHPVVRKGLGSCLNNLEHIEIVGEAVDGQETVSKVRELSPEIVLMDLDMPT 76 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G K I++ VKVL LS + Y + I++GA G+V K ++ A++ + Sbjct: 77 MSGLEATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELVRAIESVH 136 Query: 122 SGYTFFPSETL-----NYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 G FF + Y+ S L+NRE +L + G SNKE+A ++ + Sbjct: 137 GGGAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMASRMGV 196 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +TV H+ + KL +H++ L YA + +I Sbjct: 197 GVRTVETHRERVMNKLDIHNVAGLTKYAIAHGII 230 >UniRef50_Q023R1 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023R1_SOLUE Length = 214 Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 113/207 (54%), Gaps = 6/207 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITID-YLRTRPVDLIIMDIDL 59 M+ +++ D H +I I+ LL+ + E ++ + R I+ +R +P DL+++D+ + Sbjct: 1 MRKLRILLGDDHAMILSGIKGLLEGHYE--VIGSEKNGRALIETAVRLKP-DLVVLDVSM 57 Query: 60 PGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 P +G + IK+ K++FL+ + Y +A+ AGA+G+V K ++ A++ Sbjct: 58 PILNGIDAAREIKKALPAAKLIFLTMHTNAIYLRKALHAGASGYVLKSGAAEELLTAIEE 117 Query: 120 ILSGYTFF-PSETLNYIKSNKCSTNS-STVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 + GY + P + I+S + + +S + L++R+ IL+ L G NKEI + +S Sbjct: 118 VCKGYIYVGPDFGQDVIESIRSTGDSQGGLPALTDRQRHILQLLAEGKQNKEIGEIAHIS 177 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYA 204 +TV H+S + +LG HS+ EL +A Sbjct: 178 VRTVEFHRSRLMSRLGAHSVAELTRFA 204 >UniRef50_A5FQU5 Two component transcriptional regulator, LuxR family n=1 Tax=Dehalococcoides sp. BAV1 RepID=A5FQU5_DEHSB Length = 209 Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 105/206 (50%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 +++I+D HPI+R ++ +L + + + + + T + DLI++D+ LP + G Sbjct: 3 NILIVDDHPIVRAGVKTILNAERGMFTLDEAQNAKETKLKISANNYDLILLDLTLPDSQG 62 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 LK IK I+ +L LS E Y R I+AGA+GF+SK + ++ A++ + +G Sbjct: 63 LNLLKDIKTIKKHTPILVLSVHPEEQYGIRCIKAGASGFISKESAPFELIKAIRKVQAGG 122 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 + + + LS+RE I + GL E+A++ LS KT+ + Sbjct: 123 RYISPALAEIMACQIFDKDGPRHLCLSDREFDIFIGIAQGLRVTELAERFKLSPKTIYTY 182 Query: 185 KSNIYGKLGLHSIVELIDYAKLYELI 210 + ++ K+GL S VEL YA +LI Sbjct: 183 REHVLTKMGLSSNVELARYADTNDLI 208 >UniRef50_B4D831 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4D831_9BACT Length = 209 Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 10/189 (5%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V+I+D H ++R+ + + +L +V + + ++ R D++ MD LPG DG Sbjct: 7 VLIVDDHAMMRLGLVEAIAGERDLTLVGEAANGTQCLEQYRKHQPDVVTMDFRLPGADGA 66 Query: 66 TFLKRIKQIQSTVKVLFLS--SKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 ++ +V+ LS E + RA++AGA G+VSK + ++ A++ ++ G Sbjct: 67 ESTAHLRTEFPDARVVVLSVFEGEEDIW--RAVEAGAMGYVSKSAEVEEVLEAIRCVVGG 124 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 T+FP+ + + S + T L+ RE +L ++V+GLSNKEIA L +S TV Sbjct: 125 ETYFPAPIASKLASRR------TRDALTPREHQVLHHIVAGLSNKEIAAALHMSEATVKL 178 Query: 184 HKSNIYGKL 192 H SN KL Sbjct: 179 HISNTLAKL 187 >UniRef50_Q13QW9 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=Q13QW9_BURXL Length = 220 Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 2/201 (0%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITID-YLRTRPVDLIIMDIDLPGTD 63 SV+++D H ++R LL+ N+++ + + D + RP D+++MD+ LPG Sbjct: 7 SVLLVDDHAVVREGYRRLLELNADVHVCGEAADAAQAYQRFCALRP-DVVVMDVSLPGAS 65 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++R+ + +VL S E + RA+ AGA G+V+K + + + AV+ I Sbjct: 66 GIEAMRRMLAREPDARVLIFSVHEEAIFVRRALDAGALGYVTKASAPDVLVEAVRTIARR 125 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + + + + LS RE +LR LV G + IA+KL LS KTV+ Sbjct: 126 AGYLSPDISQALALRNAFSEGPPGRQLSAREFEVLRLLVQGYTLPSIAEKLGLSQKTVAN 185 Query: 184 HKSNIYGKLGLHSIVELIDYA 204 H+S I K G + V+L A Sbjct: 186 HQSVIRQKFGADNGVQLAQMA 206 >UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Actinomycetales RepID=D2AUN6_STRRD Length = 226 Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 7/201 (3%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V++ D +IR + +L + E+++V + D R ID + + D++++DI +P DG Sbjct: 4 VLLADDEAMIRAGVRAILAADPEIEVVAEAGDGREAIDLVLSHRPDVVLLDIRMPRMDGL 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 + ++++ V+ L++ E Y RA+ GA GF+ K D ++ + + G Sbjct: 64 AAVAELRRVAPGTAVVMLTTFGEDDYIARALGEGAGGFLLKSGDPRELLAGIHAVAEGAA 123 Query: 126 FFPSETLNYI-------KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 + + + + + V L+ RE +L + GLSN +IA +L L Sbjct: 124 YLSPRVAHRVITQLTGGRMTRVVAAREQVAALTPRERDVLALVGEGLSNGQIARRLYLVE 183 Query: 179 KTVSAHKSNIYGKLGLHSIVE 199 TV AH S I +LG + V+ Sbjct: 184 GTVKAHVSAILTRLGARNRVQ 204 >UniRef50_C6C961 Two component transcriptional regulator, LuxR family n=24 Tax=Gammaproteobacteria RepID=C6C961_DICDC Length = 211 Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 113/209 (54%), Gaps = 8/209 (3%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIV---LKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +V ++D H ++R LL ++Q+V D +++ L VD+ +MDI +P Sbjct: 5 NVALIDDHIVVRSGFAQLLSLEGDIQVVGQYASAADAGVSLLKLN---VDVAVMDIAMPD 61 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G + L R++Q + T + + LS + A+ AGA G+++K ++ AV+ + Sbjct: 62 ESGLSLLARLRQKRPTFRAIILSIYDTAAFVQSALDAGACGYLTKRCGPEELVQAVRAVH 121 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 +G ++ ++ + ++ ++ + L+ RE I LV+GLS K IA++L LS+KTV Sbjct: 122 AGGSYLCADAMRALRHSR--QRPKALEALTPREREIFDLLVNGLSVKTIAEQLDLSHKTV 179 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 H++N+ KL + VEL+ +A ++L+ Sbjct: 180 HVHRANVLDKLHCATTVELVHFALQHQLL 208 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 109/190 (57%), Gaps = 2/190 (1%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 +++I D H +IR ++ LL+ + +++++ + ++ +D L+T D++++DI++P +G Sbjct: 4 NIMITDDHSMIREGLKNLLELDGDIKVIAEAENGEDCLDKLKTFRPDVLLLDINMPKMNG 63 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 LK +K +S VKVL L+ +E Y +A+ G NG+V K ++ ++ A+ I G Sbjct: 64 LEVLKALKDRKSKVKVLVLTVHNETEYLMKAVDIGINGYVLKDSESAELKKAIFTIADGE 123 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTV--LSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 T+ + + S N + + L+ RE+ +L+ + G N++IA ++ +S +TV Sbjct: 124 TYIQPSLIPALNSKMIQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISERTVK 183 Query: 183 AHKSNIYGKL 192 H S+I+ KL Sbjct: 184 NHISSIFKKL 193 >UniRef50_B8CMA1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Gammaproteobacteria RepID=B8CMA1_SHEPW Length = 196 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 106/201 (52%), Gaps = 12/201 (5%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 + +II D H I+ I LL+ +E Q++ D ++ ++ +L+I DI +PG Sbjct: 2 SRIIIADDHLIVAQGIAGLLK--AEHQVLAIAKDGEELVELVKQHDPELVITDISMPGMT 59 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + +K+I+ ++V+ L+ E YA AI AGA G+V K +D+ AV +L+G Sbjct: 60 GIAAVAALKRIKKDLRVICLTMHDEQEYAEGAIAAGALGYVLKHEATDDLVDAVNSVLAG 119 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + KS + ++ T LS R++++LR L G S K++AD L +S +TV Sbjct: 120 KQYLS-------KSVQVEDSAPT---LSARQLSVLRLLAQGKSAKQVADALFISPRTVEF 169 Query: 184 HKSNIYGKLGLHSIVELIDYA 204 HK +I + S ELI YA Sbjct: 170 HKYSIMKLIEAKSSAELIQYA 190 >UniRef50_UPI0001C31EFC two component transcriptional regulator, LuxR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31EFC Length = 214 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 5/196 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 P V++ + HP+ R I L++ + ++V D R + +R R + ++DI LPG Sbjct: 4 PPALVVVAEDHPVYREGIVRLIEADPRFELVAAVGDGREALAEIRGRAPAVAVLDIGLPG 63 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G ++ I + + + LS+ + RAI AGA F+ K + ++I AV ++ Sbjct: 64 IGGIEIMEAITREHLPTRAVCLSALEDSVTVHRAISAGARAFLPKGSSGDEIVEAVSVVA 123 Query: 122 SGYTFFPS---ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 G + P +TL + + VLS RE+ +LR GL+ IA L++ + Sbjct: 124 DGGSLLPRAVHDTLTMALRQRSEVPAG--PVLSTRELEVLRLASDGLTVSAIAQALIIGD 181 Query: 179 KTVSAHKSNIYGKLGL 194 TV H +IY K G+ Sbjct: 182 ATVKTHLQHIYDKFGV 197 >UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR family n=18 Tax=cellular organisms RepID=B4SLZ0_STRM5 Length = 217 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 104/194 (53%), Gaps = 9/194 (4%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITID-YLRTRPVDLIIMDIDLPG 61 P V+++D HP++R + LL +L+++ + D I Y R +P D+++MD+ +P Sbjct: 7 PIGVLVVDDHPLLRDGLAALLGAQPDLRLLGEAADGEEAIACYQRLQP-DVVLMDLQMPR 65 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG + RI+ + +++ L++ A RA+QAGA+ ++ K ++++ ++M+ Sbjct: 66 LDGVEAIVRIRALDPRARIIVLTTYRGDVRAVRALQAGASAYLLKDMLRHELVDTIRMVA 125 Query: 122 SG-YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 G P I ++ LS RE +LR++ GLSNK I +++ +S +T Sbjct: 126 GGRRAPIPPAVAASIAAHVVEDR------LSPRETEVLRHVAGGLSNKRIGERMQISEQT 179 Query: 181 VSAHKSNIYGKLGL 194 V AH ++ KLG+ Sbjct: 180 VKAHMKSLMDKLGV 193 >UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4B6_LISGR Length = 214 Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/212 (27%), Positives = 110/212 (51%), Gaps = 9/212 (4%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP-GTDG 64 ++I D H ++R +++ ++ +++++ D ++ + D+++MD+ +P G +G Sbjct: 3 LLIADDHAVVRSALKFMINAQKDMEVIGDAADGTEAFLFIESNRPDIVLMDLSMPPGENG 62 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 KRI + KV+ L+ E Y +A+QAGA G++ K + + + A++ ++ G Sbjct: 63 LLTTKRITEAFPETKVILLTMHDEEAYITQALQAGAQGYIMKNSSEELLLDAIRSVMGGQ 122 Query: 125 TF------FPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 + S+ + +K S N + LS RE IL + G NKEIA++L +S Sbjct: 123 IIIDPVFNYSSKQIEQLKRADASEN--IIERLSKREKEILPLIALGYGNKEIAERLFISA 180 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 KTV HKS+I KL + +L+ + +LI Sbjct: 181 KTVEVHKSHIMKKLEMKKFSDLLRFCVKEQLI 212 >UniRef50_B1ZP37 Two component transcriptional regulator, LuxR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZP37_OPITP Length = 246 Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 108/216 (50%), Gaps = 17/216 (7%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDY----RITIDYLRTRPVDLIIMDIDLP 60 +V+++D HP R + + +L++V + + R+ + RP D++++D++LP Sbjct: 6 TVLVIDDHPATREGLRAAIDAQRDLRVVGEAATWQEARRLAAEL---RP-DVMVLDLNLP 61 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 +G+T ++++K + L LS E YA R ++AGA G++ K I A++ + Sbjct: 62 DGNGWTLVEQLKAADALPPTLVLSVCDEQLYARRLLRAGAGGYLMKDEPMETILRAIREV 121 Query: 121 LSGYTFFPSETLNYIKSN---------KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIA 171 G + N + S + + LS+RE+ I L GL NKEIA Sbjct: 122 REGRIIASATITNSLLSEALGMREDEPPAEAHDGNLAELSDRELQIFALLGRGLRNKEIA 181 Query: 172 DKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLY 207 +L LS KTV+ +K + KLG+ + LI++ + + Sbjct: 182 ARLRLSEKTVATYKVRLMSKLGVRTTPALIEHYRRW 217 >UniRef50_C6X491 DNA-binding response regulator, LuxR family n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X491_FLAB3 Length = 215 Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/206 (30%), Positives = 116/206 (56%), Gaps = 6/206 (2%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 +I+ D H I+RM + +++ I+ + +D++ + +DL IMD+++P Sbjct: 10 IIVADDHGIVRMGLLQTVKRLLPDAIITEVEDFKSLYKVISKEELDLAIMDVNMPNGTVQ 69 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAV-QMILSGY 124 + I+ Q +K+L SS+ E YA R ++ GA G++SK + + I A+ M+ +G Sbjct: 70 EAIDYIRNHQPKLKILIFSSQDEELYALRYLKMGAGGYLSKQSSSSVIETALTSMLTTGR 129 Query: 125 TFFPSETLN---YIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + SE + + +S +T +S V +LS+RE+ I L GL KEI+++L L + T+ Sbjct: 130 --YASEAVKEAMFFESVSGNTKTSPVEILSDRELQIANKLAEGLPLKEISNQLNLHSSTI 187 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLY 207 S +K+ ++ KL + SI EL++ +LY Sbjct: 188 STYKNRLFEKLKIKSIPELVEILRLY 213 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 104/203 (51%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 KP V+++D H ++ L++ E+++V + ++ ++ D+++MD+ +P Sbjct: 7 KPIRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPI 66 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G + IK+ KVL L+ Y + +QAGA G++ K + A++ + Sbjct: 67 MNGIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVH 126 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 G T+F T + + S + ++ LS RE ILR + G S+K+IA L +S +TV Sbjct: 127 QGATYFCESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNISYRTV 186 Query: 182 SAHKSNIYGKLGLHSIVELIDYA 204 H+ NI KL +HS EL YA Sbjct: 187 ETHRQNIKHKLDIHSTAELAQYA 209 >UniRef50_Q1D626 DNA-binding response regulator, LuxR family n=2 Tax=Cystobacterineae RepID=Q1D626_MYXXD Length = 223 Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/217 (28%), Positives = 111/217 (51%), Gaps = 17/217 (7%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITI-DYLRTRPVDLIIMDIDL 59 M PT + +++ P + ++ +L EL++V + + + D ++ RP L+++D++L Sbjct: 3 MDPTRIFVVEDQPQLLKNLVKVLATFPELEVVGTSQEGEAAVEDIVQLRP-QLVLLDLEL 61 Query: 60 PGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 PG +G +R+K+ V++L L+S + AIQAGA+G++ K I +Q Sbjct: 62 PGINGIQVTQRVKRRAPEVEILILTSFDDETKVYEAIQAGASGYLVKRVGPEKIRSGIQE 121 Query: 120 ILSG------------YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSN 167 ++ G + +F S ++ K N +T L E +LRY+ GLSN Sbjct: 122 VMEGGTVLEPIIAKRFWNYFQSVQAKSTQAEKKLENPWALTPL---EFEVLRYVAKGLSN 178 Query: 168 KEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 E+ + L +TV H S+IY K+G++S VE + A Sbjct: 179 AEVGHVMTLERRTVRTHLSHIYRKMGVNSHVEAVVMA 215 >UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrhizobium RepID=Q89IF1_BRAJA Length = 217 Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 52/200 (26%), Positives = 98/200 (49%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 SV+++D HPI+R +L+ +L +V + D+ + D++++DI +PG G Sbjct: 10 SVLLVDDHPIVRQGYRRVLESQGDLHVVAEADNAADAYGAFKAHDPDVVVLDISMPGASG 69 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 ++ I+ ++L + +E A AGA+GFV+K ++ + + +A++ + G Sbjct: 70 LEAIRNIRARSPRARILVFTMHNEAVLVKAAFSAGASGFVTKSSEPSAVVNAIRSVARGE 129 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 + + + + S S + L RE+ ILR G + ++IA L LS KTV + Sbjct: 130 RAMSDDIAHILADDSLSPTGSVLDQLGEREIEILRQFAGGATTEQIATHLNLSVKTVQNY 189 Query: 185 KSNIYGKLGLHSIVELIDYA 204 I K G + +L+ A Sbjct: 190 HYLIKTKTGARTDAQLVRLA 209 >UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5X6_PELCD Length = 223 Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/220 (28%), Positives = 113/220 (51%), Gaps = 15/220 (6%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P V + D HP++R + + L + +++ + + D ++ ++ P D+ ++D+D+PG Sbjct: 6 PFKVFLADDHPLLRTGLRMSLSRFADIDFIGEASDGFKAVEKIKQNPPDVALIDVDMPGL 65 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDI------FHA 116 G ++ +++ + +L LSS S+ + A+QAGA+G+V K D N++ F Sbjct: 66 SGIAAVRMLRKQYPDMTLLILSSYSDKHFIEEAMQAGADGYVLKSIDINELADLIRAFSC 125 Query: 117 VQMILSGY------TFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEI 170 + +S Y + SE ++K + + L+ RE IL L G NKEI Sbjct: 126 GEHPMSPYLMDLAVDWHASEQEEESPADK---DDESDAFLTRREQQILSCLAQGQGNKEI 182 Query: 171 ADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 ++ L +S +TV H NI+ KL + S +E + AK +LI Sbjct: 183 SNALFISTETVKTHIKNIFKKLEVKSRLEAVIAAKEKKLI 222 >UniRef50_C8QGG5 Two component transcriptional regulator, LuxR family n=1 Tax=Pantoea sp. At-9b RepID=C8QGG5_9ENTR Length = 194 Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 18/208 (8%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNS-ELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 +++++D HP++ +++ + LQ+ D+ + L+ +DL+I+DI LP + Sbjct: 2 AALLLIDDHPLVEVALSAACVNSPIPLQLFAAGDEAQAR-QLLQQHAMDLVILDIGLPDS 60 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG L+R++ VL S++ RA GA G+V K + A+ +L Sbjct: 61 DGLELLRRLRVHHPDCPVLIYSAEQSRHTLLRAASLGAAGYVVKSQSMAQLLSAILAVLG 120 Query: 123 GYTFFP--SETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 G FP E ++ L+ +E I+ L GLSN +IA++L +SNKT Sbjct: 121 GQQAFPDLPERIDL--------------PLTEKEQQIVALLARGLSNLQIAEQLHISNKT 166 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYE 208 VS HK NI K G+ S+VEL K ++ Sbjct: 167 VSTHKKNILEKTGVQSVVELAALWKAHQ 194 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 6/210 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M T +++ D H + R + LL +++++ + + + + D+++MDI + Sbjct: 1 MSKTKILLTDDHTLFRQGVRTLLAAEADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMA 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G F + I++ + VKV+FLS + Y + GANG++ K + + + A++ + Sbjct: 61 GMSSFEATRLIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAIREV 120 Query: 121 LSGYTFFPSETLNYI------KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKL 174 G ++ L+ + + T S L+ RE IL+ L G S KEIA Sbjct: 121 QRGGSYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAFF 180 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 LS KTV AHK N+ KL +H+ +L+ YA Sbjct: 181 ELSVKTVEAHKFNLMRKLDIHNKAQLVQYA 210 >UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746AEC Length = 222 Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 99/204 (48%), Gaps = 6/204 (2%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYL-RTRPVDLIIMDIDLPGTDG 64 V+++D H ++ +L +L++ + L + RP DL++ D+ L G G Sbjct: 12 VLLVDDHRMVLEGYRFMLNAQPDLEVCATAVSAAEALGLLEQVRP-DLVVTDLTLGGRSG 70 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 +K + + K+L S E +A R +QAGA G+V K D AV+ +L+G Sbjct: 71 LDLIKDVMALFPETKILVCSMHDEMLWANRTLQAGARGYVMKDADGPTFLTAVRTVLAGQ 130 Query: 125 TFFPSE----TLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 + S L +K +SS + LS+RE + R G + KEIA +L LS KT Sbjct: 131 RYMSSRLAASVLESFGQSKPRGSSSPIEKLSDREFEVFRLFGEGKTAKEIAAQLNLSPKT 190 Query: 181 VSAHKSNIYGKLGLHSIVELIDYA 204 VS H+ +I KLG + E+I A Sbjct: 191 VSVHRDHIKEKLGFSTSAEMIRQA 214 >UniRef50_C6WV69 Two component transcriptional regulator, LuxR family n=2 Tax=Betaproteobacteria RepID=C6WV69_METML Length = 216 Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/212 (30%), Positives = 111/212 (52%), Gaps = 4/212 (1%) Query: 2 KPT-SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 KP VII D H I+R ++ +L + ++ ++ + + I D++++DI LP Sbjct: 5 KPKIKVIIADDHAILRAGLKQILSETEDILVIAEAQNANEAIKLGSQPEADVLLLDISLP 64 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G LK IK+ S + VL LS E YA RA+++GA G++ K + +++ +A+Q + Sbjct: 65 DRSGMEALKYIKRENSHIAVLMLSMHREDEYAIRALKSGAAGYLCKQSASSELVNAIQTV 124 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTV--TVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 G + E I +N+ + +LS+RE + SGLS ++A+KL LS Sbjct: 125 ARGKKYITPEVAE-ILANQIGRDDQKAPHELLSDREYQTFIMIASGLSVTDVANKLSLSV 183 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 KTVS +++ + K+ L EL YA + L+ Sbjct: 184 KTVSMYRARLLEKMQLKHNAELTHYAFKHNLV 215 >UniRef50_C6X139 DNA-binding response regulator, LuxR family n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X139_FLAB3 Length = 216 Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 53/204 (25%), Positives = 112/204 (54%), Gaps = 7/204 (3%) Query: 7 IIMDTHPIIRMSIEVLLQ---KNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++ D H I+R + ++ NSE++ +D + + P+D+ ++D P + Sbjct: 9 LLGDDHQIVRQGLSFVINDLFPNSEIKHAPTLNDVLLKA---QVGPIDIAVLDAQFPDGN 65 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 + +K+++++Q VK+L +S E +A R ++ GANGF+SK +++++I A+ +++ Sbjct: 66 SISIIKKLRELQPAVKILIFTSSEEEHFALRFLREGANGFLSKLSEESEIETALAEMVNN 125 Query: 124 YTFFPSETLNYIKSNKCST-NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + P T + + + N+ ++ L++RE+ + L GL N E+A+ L L TVS Sbjct: 126 GNYLPPLTRQMLAESAVNPENTDPLSKLTDRELEVADLLAQGLGNLEVANHLDLRQNTVS 185 Query: 183 AHKSNIYGKLGLHSIVELIDYAKL 206 K I+ KL + ++V+ I+ ++ Sbjct: 186 TFKKRIFSKLNVENMVDFIELMRI 209 >UniRef50_A5FMH2 Two component transcriptional regulator, LuxR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FMH2_FLAJ1 Length = 211 Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 99/200 (49%), Gaps = 1/200 (0%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K ++++D HPI+ I LL ++IV K + +DY+ VDL+++DI LP Sbjct: 3 KKYKMVVVDDHPIVISGISGLLSDLDNIEIVEKMQSGALLLDYIENNEVDLVLIDIFLPV 62 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G K IKQ S V V+ +SS+SE + IQ G NG++ K + + + + Sbjct: 63 VTGIDLCKAIKQKYSQVIVIGMSSQSERSLVMQFIQNGGNGYILKSASFEEFKNCINKAI 122 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 G F S+ + I S S + + LS RE I L G +EIAD+L LS TV Sbjct: 123 EGEIVF-SDEVKTIVSQPLSEDLDNIPSLSRREKDIALLLSKGKQTQEIADELFLSFLTV 181 Query: 182 SAHKSNIYGKLGLHSIVELI 201 H+ NI K ++ ELI Sbjct: 182 QTHRRNILQKYKTKNVAELI 201 >UniRef50_Q1IT25 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IT25_ACIBL Length = 227 Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 107/210 (50%), Gaps = 7/210 (3%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K ++I D H I R + LL+ E ++ + D + R D++++D+ +P Sbjct: 8 KTVRILIADDHTIFRDGLRRLLESEPEFDVIGEAADGGEAVQQARRLGPDVLLLDLAMPR 67 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G L+ + S+ K++ L++ E +A+QAGA G + K + + ++ ++ Sbjct: 68 VPGLDALRELTTDDSSTKIIILTAAIEKAQIVQALQAGAKGIILKESATQLLLKGIRSVM 127 Query: 122 SGYTFFPSETLN----YIKSNKCSTNSSTVTV---LSNREVTILRYLVSGLSNKEIADKL 174 +G + E++N Y+KS + + L+ RE+ IL +V+G +NKEIA K Sbjct: 128 AGQYWVGRESVNDIVEYLKSTAAGAQADSQAKNFGLTKREMEILGTIVAGFTNKEIAKKF 187 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 LS TV H +NI+ K+G+ S +EL +A Sbjct: 188 NLSEDTVKHHLTNIFDKVGVSSRLELALFA 217 >UniRef50_C7I0E4 Two component transcriptional regulator, LuxR family n=2 Tax=Thiomonas intermedia K12 RepID=C7I0E4_THIIN Length = 226 Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 8/203 (3%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V+I+D H ++ S+ L N ++Q V D + +R R ++++D+ +P +G Sbjct: 21 VLIIDDHALLGESLARFLGSN-DMQAVW-CGDLVEAMQSIRDRSWSVVLLDLSMPRGNGL 78 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 LKRIK + + VL LS E +A RA++ GA G+++K + + A+Q ++ G Sbjct: 79 DLLKRIKLMHPDLPVLILSMHPEQQFALRALRGGAAGYLTKGCSPDVLVEAIQKVVHGGR 138 Query: 126 FF----PSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + + NY+ N+ LS+RE+ + LV G S ++AD+L +S KTV Sbjct: 139 YLTPGVAEQLANYM--NEGEAAEEPHARLSDREMQVFMRLVEGKSVNQVADELHISCKTV 196 Query: 182 SAHKSNIYGKLGLHSIVELIDYA 204 S HK+ + KL L + +L+ YA Sbjct: 197 STHKTRLMHKLALDNDADLVRYA 219 >UniRef50_C5VFN2 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VFN2_9CORY Length = 216 Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 103/195 (52%), Gaps = 8/195 (4%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 ++I D ++ ++ +L +L++V D + +D + PVDLI+MD+ +P DG Sbjct: 5 ILIADDQVLLSRALATILGSQPDLEVVATVHDGQAAVDTVAHTPVDLILMDVRMPKLDGV 64 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 LK+I+ + K++ L++ + A+ AGANGF+ K D + +V+ + +G T Sbjct: 65 AALKKIRAKPNPPKIVMLTTFNVPDTVKAALTAGANGFLLKDADPETLIESVRTVAAGQT 124 Query: 126 FFPSETLNYIKSNKCSTNSST--------VTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 ++ + +I + + T +++L+ RE+ +L + G +N EIA +L++S Sbjct: 125 VLAADVVGHILPGALTVAADTLPSHVQQGLSLLTPREMEVLHAIGEGKTNAEIAAELVIS 184 Query: 178 NKTVSAHKSNIYGKL 192 TV H SN+ K+ Sbjct: 185 ATTVKTHVSNLLAKV 199 >UniRef50_C4XSZ8 NarL family two-component response regulator n=2 Tax=Desulfovibrio RepID=C4XSZ8_DESMR Length = 226 Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 7/210 (3%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K T + I D H ++R + +L + ++V + D + R D++++D+ L G Sbjct: 4 KRTRIAIADDHGLMRQGLAAILAADPRFEVVGEAADAAGAVGLARDLAPDVLLLDVGLAG 63 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G R+ + +V+ ++ + +AGA G+V K + + A++ +L Sbjct: 64 GSGVDVAGRVAGLAPECRVVMVTMHARLDLVAACFRAGAMGYVVKDSAATSLVAAIEAVL 123 Query: 122 SGYTFFPSE-------TLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKL 174 G + + L+ + K L+ RE ILR L G S IA +L Sbjct: 124 RGERYLDAAITPQVLLRLDEYAARKTGPRDPAYDSLTRREQQILRLLAEGRSVAAIATEL 183 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 +S KTV H++NI GKLGL ++ EL+ YA Sbjct: 184 FISKKTVENHRANICGKLGLANLAELVRYA 213 >UniRef50_B2G7N1 Two component response regulator n=7 Tax=Lactobacillus RepID=B2G7N1_LACRJ Length = 217 Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 7/213 (3%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP-GTD 63 +V++ D H I+R I L+ +V T T + +D++IMD+ +P G + Sbjct: 3 NVLVADDHAIVRSGISYLVDLQPNFTVVDGTASGTDTYIRVEQGGIDILIMDLSMPPGEN 62 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +RI VK++ LS E Y +A+ GA ++ K + ++I + ++ +++G Sbjct: 63 GLITTRRIHDKFPKVKIIILSMHEEQEYINKAMANGAMSYILKSSPDSEIVNGLKHVING 122 Query: 124 YTFFPSETLNYIKSNKCSTNSSTV------TVLSNREVTILRYLVSGLSNKEIADKLLLS 177 + + + K K S + LS RE + + G SNKEI+ K+ +S Sbjct: 123 EKYLDANIIVSKKDIKEINASGNILKLKGYNGLSKREKEVFPLIALGYSNKEISQKMFIS 182 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 KTV AHK+NI KL LH VEL+ YA + LI Sbjct: 183 TKTVEAHKANISRKLHLHGRVELVQYAIHHHLI 215 >UniRef50_A1ATT6 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ATT6_PELPD Length = 203 Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 102/201 (50%), Gaps = 5/201 (2%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V+I D H + R + LL ++ I + D ++ +R+ D+ ++DI +P DG Sbjct: 4 VLIADDHVMFRQGLINLLTTAEDIHIAAECGDGATALELIRSLEPDIAVLDITMPKLDGI 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 + + + + + + L+ + GRA+ AGA+GF+ K + ++ A++ + +G T Sbjct: 64 SITRAMGNLGLATRAIILTMHDDPLMYGRAVSAGAHGFILKDDAYEELLSALRTVAAGGT 123 Query: 126 FFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHK 185 ++ + V L+ RE IL + G +N+ IA L +S KTV+ H+ Sbjct: 124 -----AISRAIQHAAIEPEPPVAELTEREREILGLIAHGCTNRMIAQHLGISIKTVNNHR 178 Query: 186 SNIYGKLGLHSIVELIDYAKL 206 +N+ GKL LHS EL+ Y+ L Sbjct: 179 TNLMGKLNLHSTAELVRYSLL 199 >UniRef50_B1Y741 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y741_LEPCP Length = 205 Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 1/204 (0%) Query: 8 IMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFTF 67 + D HP++R + +L L +V + D + R+ DL ++D +PG G + Sbjct: 1 MADDHPVVRQRLRQILMAEPALTVVAEAGDGDEALALARSTDWDLALLDFSMPGCSGLSL 60 Query: 68 LKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTFF 127 ++ +++ VL LS E A ++AGA+G++ K + A++ + +G T Sbjct: 61 IEHVRRDFPQRPVLVLSVHDEQLLAPHVLRAGASGYLCKECATEQLIQAIRAVTAGGTHV 120 Query: 128 PSETLNYIKSN-KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHKS 186 + + + + LS+RE ++ L SG EIA +L L +TV++++ Sbjct: 121 SAPVAQRLAWQVAIESGGAPHERLSDREYRVMWLLSSGRHIVEIAQELHLRPRTVASYRH 180 Query: 187 NIYGKLGLHSIVELIDYAKLYELI 210 + KLGLH EL+ YA +EL+ Sbjct: 181 RVLRKLGLHDTAELVSYAVRHELV 204 >UniRef50_B1ZI39 Two component transcriptional regulator, LuxR family n=5 Tax=Methylobacterium RepID=B1ZI39_METPB Length = 222 Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 59/212 (27%), Positives = 108/212 (50%), Gaps = 13/212 (6%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDD----YRITIDYLRTRPVDLIIMDID 58 P V++ D HP+ R + L+ + E+ +V + YR + + P D+ I+DI+ Sbjct: 5 PIHVVLADDHPVFRHGVTSLIADSGEIVVVASVETGAAAYRAIVQH---EP-DVAILDIN 60 Query: 59 LPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQ 118 +P +G T L+ + + + + + LS Y +A +AGA G+V K + +I AV+ Sbjct: 61 MPEMNGVTVLRHLARTGARTQAIMLSVYESRVYIDQAFEAGARGYVLKRSAFQNIASAVR 120 Query: 119 MILSGYTFF----PSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKL 174 + +G + P T + + S + + + LS RE ILR++ G ++KE+AD+L Sbjct: 121 AVHAGGIYLDPALPERTAPH-RRLSSSVDDAACSTLSERERDILRFVAFGFTSKEVADRL 179 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYAKL 206 + K + K+ KLGL S +++ +A L Sbjct: 180 GATAKAIETQKARACTKLGLASRAQIVQFAIL 211 >UniRef50_B7DQP6 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQP6_9BACL Length = 210 Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 56/193 (29%), Positives = 103/193 (53%), Gaps = 1/193 (0%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P + +++ HP++R + VLL +++ V + + + ++ PVD++++D+ L Sbjct: 4 PIRIAMVEDHPVVREGLRVLLNLEPDMEFVGEAESATSALALIQRVPVDVLLLDLVLGEE 63 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG + +++ ++L LSS ++ R AGA+GF+ K D + A++ + + Sbjct: 64 DGIDLIPALRKAAPETRILALSSFTDPARMARLASAGADGFLPKTVDPTHLLAAIRQVAA 123 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G F L ++ + + L+ RE ILR + GLSNKEIAD+L +S +TV Sbjct: 124 GRVVFDRAMLKALQEPDAE-EAKRLAQLTPRESQILRQVTKGLSNKEIADRLQISERTVK 182 Query: 183 AHKSNIYGKLGLH 195 AH +I+ KLG+ Sbjct: 183 AHLQHIFDKLGVQ 195 >UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM25_SORC5 Length = 233 Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 11/204 (5%) Query: 8 IMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRT----RPVDLIIMDIDLPGTD 63 ++D HP++R L ++ +V + D LR +P D++++D+++P D Sbjct: 26 LIDDHPVVREGFARALSDEPDMVVVGQAG---TAADALRETASCKP-DVVLVDLNIPDRD 81 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G L ++ K+L LS + F A++AGA G++ K + ++ ++ I +G Sbjct: 82 GIELLGALRAQLPQAKLLVLSGYDDEFRVAEALRAGAQGYLVKTSKLEEVIEGIRRIATG 141 Query: 124 YTFFPSETLNYI---KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 S + S S + L+ RE +LR L +G+S +E A +L +S KT Sbjct: 142 GAPLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAARLTISPKT 201 Query: 181 VSAHKSNIYGKLGLHSIVELIDYA 204 V H+ IY KLG S VEL A Sbjct: 202 VETHRVRIYAKLGCKSAVELTRIA 225 >UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteroidetes RepID=A5FAZ3_FLAJ1 Length = 219 Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 58/213 (27%), Positives = 114/213 (53%), Gaps = 8/213 (3%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V++ D H +R I+ LL+ + +++V + D ++ + DL+I+DI +P G Sbjct: 7 VVLADDHVFVRDGIKSLLENEANIEVVGEAIDGADALEVVTATKPDLLIVDIRMPNLTGI 66 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 +++++ + VK++ LS Y ++I+AGA+G++ K + + + A+ + SG Sbjct: 67 EVVEKLRSENNNVKIIMLSMHESEEYVLKSIKAGADGYLLKGSSKEEFLKALHAVSSGGK 126 Query: 126 FFPSETLNYIKSNKCSTNSS--------TVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 +F + + + S ++ +S +++ RE IL L+SG NKEIA+ L +S Sbjct: 127 YFSGDISSILISQLTNSTASLEPKQTLGEEMMITKREKEILTLLLSGKGNKEIAEALEIS 186 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +T H+ N+ KL + +++EL + A Y LI Sbjct: 187 KRTAEVHRFNLMKKLKVKNLMELSNKAAEYSLI 219 >UniRef50_B5JGA7 Transcriptional regulator, LuxR family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JGA7_9BACT Length = 215 Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 13/209 (6%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVL---KTDDYRITIDYLRTRPVDLIIMDIDL 59 P ++ +D HP+ ++ LL+ N + TD + D DL+I++I Sbjct: 7 PKQILYIDEHPVCHAGLDCLLENNPSFSVCYTARNTDSASLPSD------ADLVILEITS 60 Query: 60 PGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 G ++ +KQI V VL LS E YA R ++AGA+GF+ K D+ A++ Sbjct: 61 AHPRGIPAVRDLKQIYRDVPVLVLSCHHESIYADRCLKAGASGFIMKSAPLEDLVLAIET 120 Query: 120 ILSGYTFFPSET----LNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 + G + + +N + + + S LS+RE+ I+ + +NKEIAD L Sbjct: 121 VTEGGLYVSEDVKSLMINRLANPSMNEVSGGFHNLSDRELLIVEQIGLSKNNKEIADALQ 180 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 +S KT+ +H+S I KL L S +L+ YA Sbjct: 181 ISVKTIESHRSRIKAKLRLDSPQDLMRYA 209 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 97/194 (50%), Gaps = 5/194 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +P V+++D HP++R + LL++ ++V + D I + + D+++MD+ +PG Sbjct: 17 EPIRVLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPG 76 Query: 62 TDGFTFLKRI--KQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 G + + ++ V VL +S +A A++AGA G+V K D ND AV+ Sbjct: 77 VTGIEATRTLIDRRPDLGVLVLTMSEDDASVFA--ALRAGARGYVLKGADGNDFIAAVRA 134 Query: 120 ILSGYTFFPSETLNYIKSN-KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 + G + I+ S L+ RE IL L SG SN EIA +L LS Sbjct: 135 VARGEAVYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLSQ 194 Query: 179 KTVSAHKSNIYGKL 192 KTV H ++I+ KL Sbjct: 195 KTVKNHLTSIFAKL 208 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 7/197 (3%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPV------DLIIMDIDL 59 V+++D H I+R + L+ +L++V + D + +D L R V +++MD+ + Sbjct: 13 VMVVDDHAIVRRGLRAYLETVPDLRLVSEAADGQEAVDLLNERHVVGDPMPHVVLMDLQM 72 Query: 60 PGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 P DG + I VKV+ L+S SE A+ AGA G+V K + ++ AV+ Sbjct: 73 PRLDGIEATRSILASYPDVKVVVLTSFSEAERVHAALSAGAAGYVLKDAEPEEVATAVRA 132 Query: 120 ILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 + G + + + + ++ VT L+ RE IL + GLSN+EIAD+L++S + Sbjct: 133 AVKGEVHLDAAVARLL-ARRMASPQVGVTSLTARERDILVLVGQGLSNREIADRLVISER 191 Query: 180 TVSAHKSNIYGKLGLHS 196 T H SN+ KL L S Sbjct: 192 TARTHVSNVLSKLQLSS 208 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 53/201 (26%), Positives = 104/201 (51%), Gaps = 2/201 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 + I D H ++R + +L ++ +++V + + ++ ++ + D++++DI +P DG Sbjct: 4 IAIADDHALLREGMRRMLSQSELIEVVGEASNGAEAVEVVKEKAPDVLLLDITMPVKDGI 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 I + K+L LS ++ YA R ++AGANGF+SK ++ A+ + G Sbjct: 64 EATADILALNVNTKILILSMHADEQYALRTLRAGANGFISKGARLEELLKAITDVHEGQR 123 Query: 126 FFPSETLNYIKSNKCSTNSST--VTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + P + ++ V LS RE ++ +L G++N+EIA L +S KTV Sbjct: 124 YLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQISVKTVDT 183 Query: 184 HKSNIYGKLGLHSIVELIDYA 204 H+S++ KL L + ++ +A Sbjct: 184 HRSHVLKKLELRNNSDITRFA 204 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 4/213 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K SV+++D H + R ++ LL+ +++++ + D R D+I+MDI +PG Sbjct: 21 KAISVLLVDDHVLFRQALRHLLEAEPDIRVIGEAGDGRSAQQLAERFHPDVILMDISMPG 80 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG T + +K K++ L+ +E + RAI+AGA+ ++ K ++ + + A++ + Sbjct: 81 VDGVTATRDLKAGIPNTKIIILTMFAEDGHVIRAIRAGADAYLLKNSESSKVIDAIRAVA 140 Query: 122 SGYTF----FPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 G + ++ LN + TV L+ RE+ +LR + SG+SNKEIA +L L+ Sbjct: 141 RGESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEIAAELSLA 200 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV S ++ KL + + YA + LI Sbjct: 201 ESTVKNRLSLLFEKLDVKDRTQAAIYALSHGLI 233 >UniRef50_B1ZN14 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B1ZN14_OPITP Length = 215 Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 108/203 (53%), Gaps = 8/203 (3%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDY-LRTRPVDLIIMDIDLPGTDG 64 VI+ D I M +E+L + ++ Q+V ++ D + + L +P DL+++D LPG +G Sbjct: 5 VIVEDQTAIREMLVEIL-RLDANYQLVGESGDGQSALALCLEVKP-DLLVLDAKLPGLNG 62 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 L+RI + S ++VL S ++AGA+GFV K + ++ + SG Sbjct: 63 VDLLRRISKKLSGMRVLVFSGHENPVLIREMLEAGAHGFVEKTAGLFEFKKGLETVASGG 122 Query: 125 TFFP---SETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 T+F + L + +N ++N T L++RE IL+ + S KEIA KL +S KTV Sbjct: 123 TYFGPAVAALLRNVVANPSASN--TADFLTDREREILQLVAESHSTKEIAAKLGISIKTV 180 Query: 182 SAHKSNIYGKLGLHSIVELIDYA 204 H++N+ KL LH + L YA Sbjct: 181 DNHRTNLMRKLNLHDVASLTRYA 203 >UniRef50_Q2W107 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Magnetospirillum RepID=Q2W107_MAGSA Length = 214 Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 108/203 (53%), Gaps = 5/203 (2%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V+++D H + R ++ L+ S+++IV + + T+ L D++++DI LP +G Sbjct: 5 VMLVDDHRMFREALRAPLEAESDMEIVAEANSGADTLASLDLACPDVLVLDIGLPDLNGI 64 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 + + ++++ LS ++ Y ++AGA+G+V K + +++ A++ + G + Sbjct: 65 EVARTAIRRHPDLRIVALSGFADRIYIEEMLKAGAHGYVVKSSGADELVSAIRAVAGGSS 124 Query: 126 FFPSET----LNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 F E L +I+S+ T + +VL RE +L L GL + EIA L ++ TV Sbjct: 125 FLSPEATQVMLRHIQSD-ADTVAPPPSVLGKREREVLVLLAGGLRSAEIAASLGIAVGTV 183 Query: 182 SAHKSNIYGKLGLHSIVELIDYA 204 H+ NI KLG++ +LI YA Sbjct: 184 EVHRRNIKQKLGMNRTADLIRYA 206 >UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0G6_SYNWW Length = 213 Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 56/199 (28%), Positives = 108/199 (54%), Gaps = 10/199 (5%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M V+I D H ++R + LL+ +S ++++ + D + I+ R D+IIMD+++P Sbjct: 1 MDKARVVIADDHVLVREGLRKLLELDSNIKVIDEVGDGQGAINIARKEKPDIIIMDVNMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRA----IQAGANGFVSKCNDQNDIFHA 116 GTDG + IK+ +V+++ L+ Y G ++AGA+ ++ K +++ Sbjct: 61 GTDGIVATRVIKRELPSVRIIALT-----VYEGEEVVDMVKAGASAYILKDVAGSELVDT 115 Query: 117 VQMILSG-YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 + +++G +P ++ + S N + L+ RE +L LV G +NKE+A+ + Sbjct: 116 IHRVMNGEVVIYPRVANRLVRELRQSENRKSEIRLTKREKDVLTLLVKGNTNKEMAEVMF 175 Query: 176 LSNKTVSAHKSNIYGKLGL 194 +S KTV H ++I+ KLG+ Sbjct: 176 ISEKTVKNHLTSIFRKLGV 194 >UniRef50_A4JJ97 Two component transcriptional regulator, LuxR family n=6 Tax=Proteobacteria RepID=A4JJ97_BURVG Length = 213 Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 18/199 (9%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKT---DDYRITIDYLRTRPVDLIIMDIDLPGT 62 ++I+D HPI+R + LL++N E V + DD +D ++ D I++D+ LPG Sbjct: 3 ILIVDDHPILRDGVAALLRQNGEDVTVAQAGNADDAMRMLD--QSADFDAIVLDLKLPGM 60 Query: 63 DGF----TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQ 118 +G F + Q+Q ++ LS+ + A GA G+V K + + A++ Sbjct: 61 NGLDAISAFAGKCPQLQ----IIVLSTSEDAADVRAAFARGALGYVPKSAGPHTVLSAIR 116 Query: 119 MILSGYTFFPSETLN-----YIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADK 173 M+L G + P L+ S + + + + L+ R++ +LRY+ G+ NK IAD+ Sbjct: 117 MVLDGERYVPPLMLDDSSSAAPGSPRPAPATRSAGPLTQRQIEVLRYVAEGVPNKVIADR 176 Query: 174 LLLSNKTVSAHKSNIYGKL 192 L LS KTV AH + I+ L Sbjct: 177 LNLSEKTVKAHVTAIFKAL 195 >UniRef50_B2STP5 Transcriptional regulator LuxR/uhpA family n=22 Tax=Xanthomonadaceae RepID=B2STP5_XANOP Length = 215 Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 103/204 (50%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V ++D H ++R ++++L K ++ +V + + + +R D+++ D+ LPG G Sbjct: 5 VFLIDDHALVRTGMKMILSKEVDVCVVGEAESGEAALPQIRQLKPDIVLCDLHLPGVSGL 64 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 +RI + +V+ +S + R ++AGA+G+V K D +++ AV+ + G Sbjct: 65 EITERIVKGDYGTRVIIVSVLEDGPLPKRLLEAGASGYVGKGGDAHELLRAVREVALGRR 124 Query: 126 FFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHK 185 + + + + S LS RE+ + L GL ++IA +L LS KT++ HK Sbjct: 125 YLGNTIAQNLALSNLEGGGSPFDALSPRELEVALLLTQGLRQEDIAKRLNLSAKTINTHK 184 Query: 186 SNIYGKLGLHSIVELIDYAKLYEL 209 + ++ K+G+ + L A Y L Sbjct: 185 ARLFEKVGIQDNIALARLANQYGL 208 >UniRef50_B3E9K5 Two component transcriptional regulator, LuxR family n=1 Tax=Geobacter lovleyi SZ RepID=B3E9K5_GEOLS Length = 214 Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 6/210 (2%) Query: 6 VIIMDTHPIIR---MSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 ++++D H ++R +SI +LQ++ L + + L+ DL+++DI +P Sbjct: 4 LLLVDDHAMVRKGLVSILSVLQEDGMLLSCDEAGSGEDALGLLKQYRYDLVVLDIAMPEL 63 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G L I + T+ VL LS E +A R+++ GA+G+++K +++ AV +L Sbjct: 64 GGLELLSIIHENWPTLPVLMLSMFPEEQFALRSLKLGASGYLTKKEAADELLLAVGQLLK 123 Query: 123 GYTFFP-SETLNYIKSNKCSTNSS--TVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 G + S + + I S ++S + LSNRE ILR L +G S K IA L LS K Sbjct: 124 GKRYLSQSLSTSLINQALASGDNSRPSHATLSNREFQILRSLATGKSLKAIALDLELSIK 183 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 TVS +K+ ++ KLG H+ V+LI YA ++L Sbjct: 184 TVSTYKARLFAKLGFHNDVDLIAYANNHQL 213 >UniRef50_Q0HL36 Two component transcriptional regulator, LuxR family n=11 Tax=Gammaproteobacteria RepID=Q0HL36_SHESM Length = 225 Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 108/198 (54%), Gaps = 9/198 (4%) Query: 2 KPTS----VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDI 57 +PT+ V +++ ++R I L+ + +++ + ++ + + L+T VD+++ DI Sbjct: 12 QPTARTIRVGLVEDQQLVRQGIASLIAISQHIEVSWQAENGQEALKRLQTDAVDVLLSDI 71 Query: 58 DLPGTDGFTFLKRIKQIQSTVKVLFLSS--KSECFYAGRAIQAGANGFVSKCNDQNDIFH 115 +P DG + LK+++ Q+++ V+ L++ SE F ++QAGANGF+ K + + Sbjct: 72 RMPVLDGLSLLKQLRAAQNSIPVIMLTTFDDSELFL--NSLQAGANGFLLKDVSLDKLLE 129 Query: 116 AVQMILSGYTFFPSETLNYIKSNKCSTNSS-TVTVLSNREVTILRYLVSGLSNKEIADKL 174 A++++ G L ++ + + S T +LS RE IL ++ G SNKEIA+ + Sbjct: 130 AIEIVAQGGHLIEPSVLEQMQQSSATAQSGPTHYLLSEREREILGFMAGGFSNKEIANAV 189 Query: 175 LLSNKTVSAHKSNIYGKL 192 L+ TV H S I KL Sbjct: 190 FLAEGTVKNHVSTILAKL 207 >UniRef50_C1DSJ1 Two-component response regulator, LuxR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DSJ1_AZOVD Length = 211 Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 106/203 (52%), Gaps = 5/203 (2%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 SV+I+D H + R + LL ++ ++ + + ++ LR + + I+DI+L G G Sbjct: 3 SVLIVDDHQLFRSGLSRLLSEDRKIAVEGEAASLPQAMEILRRQTFHVAIVDINLAGRSG 62 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 L RI+ + VL +S ++ A Q GA+G++SK + ++ AV+ + G Sbjct: 63 LELLSRIRHDWPRLPVLMISMYPAAQFSAVAFQKGASGYLSKDVEPGELLRAVKTVAKGG 122 Query: 125 TF---FPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + PS T + + + L++RE+ I +V+G EI +++LLS KTV Sbjct: 123 QYDASHPSATPAQVADERFANQPH--LRLTDREMQIFNLIVTGARLTEIGERILLSVKTV 180 Query: 182 SAHKSNIYGKLGLHSIVELIDYA 204 S +K+ I KLG+++ ELI YA Sbjct: 181 STYKTRIMEKLGVNNNAELIQYA 203 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 103/200 (51%), Gaps = 1/200 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 ++++D HP+ R + LL + +IV + D + R DL+++D+++P +G Sbjct: 8 ILLVDDHPLFRRGLSFLLAQEYGFEIVAEATDGLEGVKLARFHRPDLVLLDVEMPVMNGP 67 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 L ++ Q + VL L+ + + ++ GA G++ K D + + A++ ++G Sbjct: 68 EALAQMLDFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAIRQAVAGQQ 127 Query: 126 FFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHK 185 E +N + +S+ + L+ RE +LRY+ G+SNK IA ++ LS TV AH Sbjct: 128 TVSPE-MNNAGQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFLSENTVKAHM 186 Query: 186 SNIYGKLGLHSIVELIDYAK 205 NI+ KL + + V YA+ Sbjct: 187 QNIFRKLNIDNRVRAAVYAR 206 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 103/200 (51%), Gaps = 10/200 (5%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIV---LKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +V+++D H + R +L++ ++ +V +D ++ L R +++MDI LPG Sbjct: 7 AVLVVDDHTLHRDGTRRILEQYDDVDVVGDAASGEDALAMVNRLHPR---VVLMDIRLPG 63 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G +RI++ +VL +++ + Y A GA G++SK ++ AV+ + Sbjct: 64 MNGIEATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVRAVA 123 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 G + + + + + SS L++RE +LR L G+ NK+IA +L +S +TV Sbjct: 124 GGNSVLQPTLMAALLAKR----SSPANTLTDRERAVLRLLAEGMHNKQIASRLGISARTV 179 Query: 182 SAHKSNIYGKLGLHSIVELI 201 H IYGKLG+ S E + Sbjct: 180 ERHCDRIYGKLGVTSRTEAV 199 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 99/204 (48%), Gaps = 6/204 (2%) Query: 7 IIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFT 66 ++ D H ++R + L++ + + + + R + + D++++D+ +P +G Sbjct: 1 MVADDHEVVRRGVRALVESHPGWTVCGEASNGREAVRLAQELRPDVVVLDVTMPELNGLE 60 Query: 67 FLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTF 126 + I+ +++ L+ G+A+ AGA G+V K + + A+ + + Sbjct: 61 ATREIRASVPDTEIILLTVHDSDQLLGQALDAGARGYVLKEDAARHLVDAIDALSKHAPY 120 Query: 127 FPSETLNYI------KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 PS + N + VT L+ RE +LR L G SN+E+A +L +S KT Sbjct: 121 VPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLSISAKT 180 Query: 181 VSAHKSNIYGKLGLHSIVELIDYA 204 V H++N+ KLG SIV+L+ YA Sbjct: 181 VETHRANVMRKLGASSIVDLVHYA 204 >UniRef50_A1VT42 Two component transcriptional regulator, LuxR family n=7 Tax=cellular organisms RepID=A1VT42_POLNA Length = 224 Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 104/203 (51%), Gaps = 6/203 (2%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKT----DDYRITIDYLRTRPVDLIIMDIDLPG 61 +I++D HP +R + + L+ ++++V + + ++ D R +++ DI + G Sbjct: 7 LILVDDHPFVRDGVRMRLEATDDIRVVGEAGSVDEAMQLATDLGDERAPHIVLTDISMRG 66 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G + + VL LS + Y RAI++GA G+V K ++ +A++ + Sbjct: 67 MSGIELAALFQHRFPGIDVLVLSMHNNLEYVKRAIESGAKGYVLKDAPAQELVNAIRAVH 126 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 +G TFF E Y + + S+ + + L+ +E L +L G SNK+IA +L +S +TV Sbjct: 127 AGETFFSPELQQYTEGFRASSGGN--SPLTPKESATLAWLACGYSNKQIARELSMSVRTV 184 Query: 182 SAHKSNIYGKLGLHSIVELIDYA 204 H+ N+ KL + EL+ YA Sbjct: 185 ETHRLNLRRKLRITGQAELVKYA 207 >UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ectothiorhodospiraceae RepID=B8GSX5_THISH Length = 220 Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 110/210 (52%), Gaps = 6/210 (2%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSE---LQIVLKT-DDYRITIDYLRTRPVDLIIMDIDLPG 61 V+++D H ++RM I LL + + +Q+V + ++ R +P D+++MDI++PG Sbjct: 4 VLLVDDHELVRMGIRGLLDERAAVTGIQVVGEAHSGEEALVEAKRLKP-DVVLMDINMPG 62 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G +RI + Q +VKVL L++ E ++AGA+G+++K ++ A+Q + Sbjct: 63 IGGLVATRRIVEAQPSVKVLVLTAMDEGPVPRWVLEAGASGYLTKGCRIEEMIAAIQGAM 122 Query: 122 SGYTFF-PSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 G P+ ++ LS RE IL ++ G + + IA L +S KT Sbjct: 123 QGERHISPAVAQRLALGGLAKGQANPFDELSGRERQILLMILQGQTPQAIATALNISPKT 182 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 VS +K + GKLG+ + ++L+ A + LI Sbjct: 183 VSTYKCRVMGKLGISNDMQLVTLAAQHGLI 212 >UniRef50_D1Y4N4 Two component transcriptional regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y4N4_9BACT Length = 215 Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 55/190 (28%), Positives = 100/190 (52%), Gaps = 7/190 (3%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYL-RTRPVDLIIMDIDLPGTD 63 S+++ D HP+ R + L+ + L ++ + D + + + + RP D+ ++DI +P D Sbjct: 3 SIVLADDHPLTRAGLAALINEEEGLNLLGEASDGKQAWEMIEKLRP-DVALLDIRMPEMD 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G T +++K + KV+ L++ + Y A+ AGA GF+ K + ++ A+Q ++ G Sbjct: 62 GITVARKVKDAKLPTKVIMLTAYNAQPYIVAALSAGARGFIVKTSAVMELTQALQSVIGG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + S N + S S+ + LS RE +L G KE+A KL ++ +TV A Sbjct: 122 GIYLDSAIANSVDS-----ASNELEQLSPREREVLLLSSQGFPVKEVAAKLFITERTVQA 176 Query: 184 HKSNIYGKLG 193 H S++Y K G Sbjct: 177 HLSSVYAKFG 186 >UniRef50_A9VYF8 Response regulator receiver n=5 Tax=Methylobacterium RepID=A9VYF8_METEP Length = 236 Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 106/206 (51%), Gaps = 8/206 (3%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDY-LRTRPVDLIIMDIDLPGTDG 64 V ++D HPI R + LL + + +++V + D R +D LRT+P D++IMDI + G G Sbjct: 10 VALIDDHPIFRSGVRGLLGETAGIEVVGEASDGRHALDLVLRTKP-DVVIMDITMTGMSG 68 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 + ++++ S V ++FL+ + + A+ AGA G+V K + + A++ ++ G Sbjct: 69 LAVARALREVGSAVHIVFLTVNEDLAFVDEALTAGAQGYVLKRSAGTSLLEAIEAVVLGG 128 Query: 125 TFF------PSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 + P + ++ + + L+ RE +LR + G++ KE++ + +S Sbjct: 129 QYVDAEMRAPPAPPDRTEAGPPAPHPGQEGGLTAREREVLRLIALGMTMKEVSLAMSISA 188 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYA 204 +V +K KLGL S ++ +A Sbjct: 189 ASVDTYKIRGCKKLGLRSRASIVRFA 214 >UniRef50_B2KBW2 Two component transcriptional regulator, LuxR family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBW2_ELUMP Length = 215 Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 112/204 (54%), Gaps = 5/204 (2%) Query: 6 VIIMDTHPIIRMSIEVLLQ-KNSELQIVLKTDDYRITIDY-LRTRPVDLIIMDIDLPGTD 63 +++ D H ++R I+ +L+ K + +V + + + +DY ++ + +D+ ++DI +P + Sbjct: 4 ILLADDHALVRDGIKSILERKGKNISVVAEMGNGKEMLDYAVKNKNIDVYVVDIAMPILN 63 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++++ +I KV+ LS + +A +AGA GFV K + ++I A++ + +G Sbjct: 64 GIAAVQKLLKINPDAKVIVLSMYDDRASVEKAFKAGARGFVVKVSSADEIIEAIKEVSAG 123 Query: 124 YTFFPSETLNYIKS---NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 + S+ ++ K S + + L+ +E IL+ + G S+KEIA + LS T Sbjct: 124 RFYLCSKVSKFVVQGFLGKASPSKKDPSGLTPKEKQILQLIAEGFSSKEIAKEFGLSLNT 183 Query: 181 VSAHKSNIYGKLGLHSIVELIDYA 204 V H++NI KL +H EL+ YA Sbjct: 184 VHVHRNNIMRKLDIHKQAELVRYA 207 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 56/191 (29%), Positives = 100/191 (52%), Gaps = 1/191 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V+I D HP++R + +L+ +Q+V + D + I+ RT D+++MD+++PG +G Sbjct: 4 VVIADDHPLLREGLRRILEFEEGIQVVCEVGDGQGAINVSRTLDFDILLMDLNMPGVNGL 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 + I++ T+ +L L+ + +Q G G++ K D + +++ + SG Sbjct: 64 EACRVIRRENETIGILVLTVDDSDEKVFQVLQLGVAGYLLKDVDPKTLIDSIRKVHSGQP 123 Query: 126 FF-PSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 P+ T + T + LS+RE+ IL Y+V G SN+EI L +S KTV H Sbjct: 124 ILSPAVTGKLLGQLVHPTQNRDTCGLSDRELQILTYVVKGSSNREIGQALFISEKTVKNH 183 Query: 185 KSNIYGKLGLH 195 S+I+ KL + Sbjct: 184 LSSIFRKLAVE 194 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 109/204 (53%), Gaps = 5/204 (2%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 SV+++D H ++ + +LL ++++ + + +D + + D++++D+ LP G Sbjct: 4 SVLVVDDHAVLGKGLSMLLNSQDDMEVCGQVGTAKEALDTCKEKCPDVVLLDLSLPDKQG 63 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 +K +K+ + +VL L+ + Y R ++AG +G++ K +++ A++ + G Sbjct: 64 HEIIKELKE-SCSARVLALTMHEDEAYFKRVVEAGGDGYILKKAADDELISAIRSVYQGE 122 Query: 125 TF----FPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 F ++Y ++ + + LS+RE +L+ + G +NKEIA+KL +S KT Sbjct: 123 VIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKLYISIKT 182 Query: 181 VSAHKSNIYGKLGLHSIVELIDYA 204 V H + I KLGL+ EL+ YA Sbjct: 183 VETHIARIKEKLGLNRRSELVRYA 206 >UniRef50_D2QF32 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QF32_9SPHI Length = 223 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 15/217 (6%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P ++I D H ++R I +LL+ +++QIV + D ID L + D++++DI +P Sbjct: 2 PIRILIADDHSVVRKGIRMLLEDETDIQIVGEASDGDEAIDLLASIGTDVLLLDITMPRM 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G LK I + V+ L S S Y +A+Q GA G++ K ++ AV+ ++ Sbjct: 62 SGIEALKVISKKYPAVRTLMFSMHSNPDYIVKAVQHGAAGYLLKDTGLEEMLRAVRTVVD 121 Query: 123 GYTFFPSETLNYI---------------KSNKCSTNSSTVTVLSNREVTILRYLVSGLSN 167 G ++P + I S + S +++RE +L L+ G+S+ Sbjct: 122 GDLYYPPNASSVIIRSLVLPNANLTKEPAKAGGSVSKSIWNRITSREGQVLTCLIDGMSS 181 Query: 168 KEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 EIA+K +S TV+ +++I K G+ + +LI A Sbjct: 182 PEIAEKFGISPNTVANQRASIIRKAGVKNTADLIRLA 218 >UniRef50_Q027R2 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027R2_SOLUE Length = 247 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 105/214 (49%), Gaps = 15/214 (7%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 +++ D HPI R + LL + ++V + D R +D L+ D++++D+ +PG DG Sbjct: 25 IVVADDHPIFRDGLCRLLALEEDFEVVAQAQDGRQVLDVLQQHEPDILLLDLKMPGLDGL 84 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 L+R++ ++ +V+ L++ + +A++ G +G V K + +++ + +G Sbjct: 85 ATLQRLQIAKNKTRVIVLTASDDKNEFVQAMKLGTSGIVLKQTATELLIKSIRKVHAGEI 144 Query: 126 FFPSETLNYI---------------KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEI 170 + S T + S T + LS RE I+ + G NKE+ Sbjct: 145 WLDSHTTAAVIRQFVANDETPAMAAPSQAPPTRERERSPLSQREREIVALVAQGFKNKEM 204 Query: 171 ADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 A+K+ +S +TV H NI+ KLG+ +EL YA Sbjct: 205 AEKMFISEQTVKNHLHNIFDKLGVSDRLELALYA 238 >UniRef50_Q0EZ33 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZ33_9PROT Length = 217 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 7/207 (3%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITI-DYLRTRPVDLIIMDIDLP 60 + +V ++D H ++R+ LL+ + +Q+V ++ + DY + P D++IMDI LP Sbjct: 5 RAITVQLVDDHEVVRIGFRYLLEADDLMQVVAESASGKQACRDYEKWLP-DIVIMDISLP 63 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G ++RI ++L LS S A RA+Q GA GFV K + + A+ + Sbjct: 64 DISGLEVMRRILLAHPEARILMLSMHS-GMVAERAMQMGARGFVCKRSGARLLISAIHEV 122 Query: 121 LSGYTFFPSET---LNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 ++G + ET L + S T + L+ RE+ + L G S +IA L LS Sbjct: 123 MAGRRYLDDETGVQLPLLHSAS-ETLKPLPSSLTRRELEVCLLLTDGRSVSDIAAALHLS 181 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYA 204 KTV +H+ +I KLG+ ++ EL+ A Sbjct: 182 EKTVYSHRQHIMEKLGVATMAELVQVA 208 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 3/207 (1%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V I D HP++R ++ LL ++ + + ID D+ ++D +PG G Sbjct: 5 VFIADDHPVVRQGLKQLLGAEADFSVAGEASSGHEVIDQCGRFAWDVAVLDYRMPGKGGI 64 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 +K ++Q VL LS E YA R ++AGA G+++K + D+ +A++ + G Sbjct: 65 DLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAAGYLTKESAPEDLVNAIRKVARGGR 124 Query: 126 FFPSETLNYIKSNKCSTNSSTV--TVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 F S L + ST LS+RE I+ L SG EIA +L LS T+S Sbjct: 125 FV-SAALGEQLALSLSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLSPNTIST 183 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 ++ I KL L S EL+ YA ++L+ Sbjct: 184 YRKRILEKLDLKSNAELMRYAIGHQLV 210 >UniRef50_C6XAP6 Two component transcriptional regulator, LuxR family n=3 Tax=cellular organisms RepID=C6XAP6_METSD Length = 214 Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 112/209 (53%), Gaps = 8/209 (3%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDD----YRITIDYLRTRPVDLIIMDIDLPG 61 V+++D H ++R + LL+++S +++V + + Y++ +YL P D+ +MD+ +PG Sbjct: 8 VLLVDDHTVVRSGLCRLLEQHSGIKVVAEAESGEQAYQVFGEYL---P-DVTVMDLSMPG 63 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G ++RI T +VL S +A + +++GA G+V+K +++ AV + Sbjct: 64 MGGLEAMRRILARYRTARVLIFSMHENAAFAMQTLKSGARGYVAKTGSFDELVKAVVEVA 123 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 G ++ + I + ++ LS RE + R G + +EIA+ L +S KTV Sbjct: 124 RGKSYISTSIAQKIALQTVIGDGDLISQLSPREFEVFRLFAEGKNAEEIAEVLKISQKTV 183 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 + + + + KLGL + VE++ +A + LI Sbjct: 184 ANYHTLVKQKLGLSNPVEMVRFAIKHGLI 212 >UniRef50_A6T252 DNA-binding response regulator, LuxR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T252_JANMA Length = 248 Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 110/201 (54%), Gaps = 5/201 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 T ++I + H +IR + L+ + ++IV T + L+ P DL+++D+DLPG Sbjct: 47 TKIVIAEDHTLIREGLRSLMAHVAGMEIVADTGSGAQVEELLQQTPTDLLLLDLDLPGCH 106 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G T RIKQ +K+L L+ ++ +A AGA+G++ K D +++ A+ +L Sbjct: 107 GITLTARIKQSHPHIKILILTGSTDHNSVRQAFAAGADGYLLKLEDSSELLEAIPTVLDN 166 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + S+ L + + S + + ++ RE IL+ + +G S++EIAD L LS TV Sbjct: 167 RRYV-SKLLGPLTHFQDSEDQA----VTPREQQILKLVAAGKSSQEIADTLELSVFTVRK 221 Query: 184 HKSNIYGKLGLHSIVELIDYA 204 HK N+ KL LH+ VEL YA Sbjct: 222 HKQNLMAKLSLHNAVELTRYA 242 >UniRef50_C1ZGK9 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZGK9_PLALI Length = 217 Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 113/204 (55%), Gaps = 6/204 (2%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYL-RTRPVDLIIMDIDLPGTDG 64 V +++ H ++R +++L+++ +LQ+V + D + + RT P D++++D+ +P +G Sbjct: 5 VALIEDHELVRTGLKLLIERQKDLQVVGEAADGAEGLKIIARTLP-DVVVLDLSIPHLNG 63 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 F L++++ + KVL +++ + R+ GA G ++K + +++ A++ I +G Sbjct: 64 FELLEQLQHQKRPPKVLVVTANEDLDSLQRSWNLGAAGHLAKRSAADELIVAIRKIAAGE 123 Query: 125 TFFPS-ETLNYIKS---NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 FPS E +K+ N+ S + LS RE +L+ + +G KEIA KL +S KT Sbjct: 124 KVFPSKEESKAVKTLGFNETSGRLTGAESLSERETEVLKLIAAGHMAKEIAAKLDISLKT 183 Query: 181 VSAHKSNIYGKLGLHSIVELIDYA 204 V +KS KL L EL+ +A Sbjct: 184 VETYKSRGMQKLSLRGRTELVRFA 207 >UniRef50_C6W5Q8 Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W5Q8_DYAFD Length = 206 Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/200 (30%), Positives = 105/200 (52%), Gaps = 5/200 (2%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 ++I + H ++R+ + LL+ + DD+ + L T+ DL+I+DI++PG + Sbjct: 4 ILIAEDHAVVRIGTKHLLKSLIPDSTISDVDDFDKILQELETKAYDLLILDINIPGGNTT 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 ++ I+ +++L SS E Y +QAGA+G++SK + + AV +L+ Sbjct: 64 KMVETIRTKSPGIRILMFSSYDEQLYGLMYLQAGADGYLSKDAPEEEFKTAVMSVLNNKK 123 Query: 126 FFPSETLNYIKSNKCSTNSS----TVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + SE + + N+ + LS RE ++ L GL +IA+KL L TV Sbjct: 124 YM-SEDMQQMNINRLINPKEYMPDPIVSLSPRETDVMNLLKEGLGTAKIAEKLNLQLSTV 182 Query: 182 SAHKSNIYGKLGLHSIVELI 201 S +K+ I+ KLG+ +IVELI Sbjct: 183 STYKARIFEKLGVKNIVELI 202 >UniRef50_C6E2Z2 Two component transcriptional regulator, LuxR family n=1 Tax=Geobacter sp. M21 RepID=C6E2Z2_GEOSM Length = 215 Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 4/207 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M+ I+M ++R + VLL+K EL + + D ++ + DL+I+D D Sbjct: 1 MRKIKTILMSDQILVRQCLWVLLEKAPELDLAAQLDFAATELEEVLELHSDLVIIDPDSS 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 DG ++ + K L LS ++E + AGA+GFV K + +++ AV+ + Sbjct: 61 DIDGSDTIRSLVSGTFPAKALILSGRAEPKRVADLLNAGASGFVPKSSPVDELLWAVKAV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVT---VLSNREVTILRYLVSGLSNKEIADKLLLS 177 + P E L+ + K ST S+ +L+ RE I+ L G S++ ++++LL+S Sbjct: 121 TGNGFYLPPE-LDAVVRRKGSTWSAAQPQQVILTPREHDIMVLLAQGKSSRAVSEQLLIS 179 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYA 204 KTV AH+++I KLGL + L YA Sbjct: 180 VKTVEAHRAHIMKKLGLSGMAALAKYA 206 >UniRef50_B6J0B9 Response regulator n=18 Tax=Coxiella burnetii RepID=B6J0B9_COXB2 Length = 240 Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 113/206 (54%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 SV++++ H +IR + ++L++ ++IV + + R + ++I+D LP T+G Sbjct: 26 SVLLIEDHVLIRRGMRLMLEQIKGIRIVGEASTGEEGLALRREKEPGVVILDFQLPDTNG 85 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 +R+ + +K+L +++ R ++ G GF++K +D ++ A++ + SG Sbjct: 86 LELARRLLRRDPEIKILVVTAMEGELLPMRLLEVGVRGFITKSSDSAELERAIRAVHSGQ 145 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 + S + + +K + S LSNR++ +L L G++ + IA +L ++ KTV++H Sbjct: 146 RYIGSAIASRLALSKTTAAKSPFDQLSNRQMEVLLLLAKGMNAESIAKQLHITAKTVNSH 205 Query: 185 KSNIYGKLGLHSIVELIDYAKLYELI 210 + ++ KLG+ + VELI A Y LI Sbjct: 206 RYRMFEKLGVKNDVELIKLAVQYGLI 231 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 111/210 (52%), Gaps = 7/210 (3%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIV-LKTDDYRITIDYLRTRPVDLIIMDIDL 59 +K +V+I D H ++R ++ +++ +++++ L D + + P D++++DI + Sbjct: 8 VKKINVLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKTQQLSP-DVVLLDISM 66 Query: 60 PGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 P +G L+R+K + ST+K++ L+ + Y I GANG+V K + + A++ Sbjct: 67 PKQNGIQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIRD 126 Query: 120 ILSGYTF-FPSETLNYIKS-NKCSTNS---STVTVLSNREVTILRYLVSGLSNKEIADKL 174 + G + +P+ +K N+ S + L+ RE +L L G++NKEI D L Sbjct: 127 VYQGLNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGDCL 186 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 +S KTV H SNI+ K+ ++ + YA Sbjct: 187 FISEKTVKNHVSNIFKKINVNDRTQAAIYA 216 >UniRef50_UPI00017443C2 hypothetical protein VspiD_13430 n=2 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017443C2 Length = 257 Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 6/212 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 + T V+++D HP R+ + +L ++ + D I R DL++MDI LPG Sbjct: 26 RATRVLVVDDHPGFRLGVVEMLHDIDGFEVCGEAGDSTTAIASFRDLEPDLVVMDISLPG 85 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG K + + VL L+ E FY RA++AGA G++ K + + AV+ Sbjct: 86 RDGIEVTKMMLAERPHTTVLVLTMHDELFYGLRALKAGAYGYLRKDDTLTQLADAVRHTA 145 Query: 122 SGYTFFPSETLNYIKSNKCST------NSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 + + L + + T + LS+RE+ + +L GL ++IA +L Sbjct: 146 NRTHYVSPRLLAQLINKLAHTPTVDEEGKPAIQGLSDREMEVFHWLAKGLGTRQIATQLC 205 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLY 207 LS KT+ H+++I KL + + ++ A+ + Sbjct: 206 LSIKTIETHRAHIKSKLRMPTAQSIVKLAREW 237 >UniRef50_B0TSG4 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=B0TSG4_SHEHH Length = 222 Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/204 (25%), Positives = 116/204 (56%), Gaps = 5/204 (2%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 ++I++D H ++R I LL+ + ++++ ++ D + LRT L+I+DI LPG +G Sbjct: 6 TIILVDDHILVRAGIRSLLESIANVEVIKESGDGIEALSLLRTHQPTLLILDISLPGLNG 65 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 + + ++++ K+L LS S+ Y +A+ G++G++ K + ++ A+ +++ Sbjct: 66 LEVARSVTKMKTKTKILMLSMHSDVEYVAKALTIGSHGYLMKESAVEELETAISTLINDK 125 Query: 125 TFFPS----ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 + E ++ ++ + + S + +L++R+ IL+ + G S +EIA+++ +S KT Sbjct: 126 QYIGKNIDLEMVDKLRGD-SNQESDLIKLLTSRQRQILQLIAEGYSTREIAERMSVSIKT 184 Query: 181 VSAHKSNIYGKLGLHSIVELIDYA 204 V H+++I +L + I L+ +A Sbjct: 185 VETHRAHIMSRLNIFDIAGLVRFA 208 >UniRef50_Q1H353 Two component transcriptional regulator, LuxR family n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H353_METFK Length = 212 Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/199 (25%), Positives = 102/199 (51%), Gaps = 1/199 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 +++ D H ++R + +LL+ N+ Q++ + + + DL I+D+D+PG G Sbjct: 5 ILLADDHAVVRSGLRILLE-NAGYQVIAEAESGERACTLWQEHHPDLGILDLDMPGIGGL 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 L RI +++ S ++ YA R++QAGA G+V K + + AV+ +L G Sbjct: 64 ETLHRIIARDRNARLIIFSMHNDNIYAARSMQAGARGYVVKTDAPEILLEAVKQVLRGGR 123 Query: 126 FFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHK 185 + E ++ ++ S + + + LS RE + R + G+S IA++L + KT + + Sbjct: 124 YIGHELAQHLAMDRFSPSENPLEKLSPREFEVFRRIAEGISLSGIAEELHIGYKTAANIQ 183 Query: 186 SNIYGKLGLHSIVELIDYA 204 + + KL + + +L+ A Sbjct: 184 TQVRQKLNVQTTGQLVHIA 202 >UniRef50_Q9JMV7 Two-component response regulator n=2 Tax=Bradyrhizobium japonicum RepID=Q9JMV7_BRAJA Length = 214 Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 2/204 (0%) Query: 2 KP-TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 KP T V+I+D HP++ L + ++I D Y+ RP D+ ++DI LP Sbjct: 6 KPATRVLIVDDHPVVLSGCRTLFASDHSIRIDEAMDAKSGHRAYISKRP-DVTVIDISLP 64 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 GF ++RI++ K++ S + + RA++ GA G+VSK +D + AV+ + Sbjct: 65 DVSGFELMRRIRKDDPDAKIIMFSMNDDPAFVVRAVELGAQGYVSKGDDPRILLKAVRKV 124 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 ++G F + + + + ++ + ++ RE+ ILR L G E+A+ L +S KT Sbjct: 125 VAGDNFISPQLAEAVTFSGAAIKANPASQMTPRELEILRLLGRGDKIVEVAEALGISYKT 184 Query: 181 VSAHKSNIYGKLGLHSIVELIDYA 204 V+ S + KLG + +LI A Sbjct: 185 VANTTSLLKQKLGAKNHSDLIRIA 208 >UniRef50_Q3SF76 Two Component Transcriptional Regulator, LuxR family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SF76_THIDA Length = 210 Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 107/204 (52%), Gaps = 7/204 (3%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLK-TDDYRITIDYLRTRPVDLIIMDIDLPG 61 P ++I++D HP++RM + +Q+ +L++ + + + D ++D LP Sbjct: 4 PLNIILIDDHPLLRMGVAGYIQQEPDLELTAQFANAAELRAWMAAGNRADAALLDRSLPD 63 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG + ++ + +KV+ L+ AI +G +G+V K ++ + + A++ + Sbjct: 64 ADGLDLVSDLRDL--GIKVIMLTIADSDEEISEAIASGVDGYVVKSSEPDQVLAAIRSVC 121 Query: 122 SGYTFFPSETLNYI-KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 G + FP LN + K + N+S ++ L+ RE+ I+ ++ GLSNK IA K+ LS T Sbjct: 122 DGQSSFP---LNIMQKMARGELNNSALSALTAREMEIVDHVKEGLSNKAIAYKMTLSENT 178 Query: 181 VSAHKSNIYGKLGLHSIVELIDYA 204 V H NI KLGL + V++ A Sbjct: 179 VRNHLRNIMEKLGLRNRVQVATLA 202 >UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC-HTH domains) n=7 Tax=Bacteria RepID=B3DW63_METI4 Length = 243 Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 4/203 (1%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V+I+D H I+R + L+ L + + + + D++++DI LPG G Sbjct: 21 VLIVDDHAILREGLIQLINSTPGLSVCGAAKNAHEGFELIEKTMPDVVLVDISLPGKSGL 80 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 +K I + +L LS E YA R ++AGA G++ K + A+Q +L+G Sbjct: 81 ELIKDIHAAYPDIALLVLSMHEESLYAERVLRAGARGYLMKNEGGQKLIAAIQKVLAGGI 140 Query: 126 FFPSETLNYI----KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 N I + + + S + LS+RE + + + G +++IA++L LS KTV Sbjct: 141 SVSERVANRILQGVSGKRKALSISPIEALSDREFEVFQLIGKGYGSRQIAEQLSLSVKTV 200 Query: 182 SAHKSNIYGKLGLHSIVELIDYA 204 A++++I KL L S +L+ YA Sbjct: 201 EAYRASIKQKLYLKSGPQLVHYA 223 >UniRef50_B1ZU68 Two component transcriptional regulator, LuxR family n=2 Tax=Opitutus terrae PB90-1 RepID=B1ZU68_OPITP Length = 238 Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 2/207 (0%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 SV++++ H IR + + +V + + + ++++D L G G Sbjct: 10 SVMMVEDHTAIRQMLAAFVAAMPGFHVVAEAESVEQALAMAELHRPSVVVLDWMLSGRSG 69 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 F++ I+ I +VL S+ + A+ AGA G++ K ++ A++ + +G Sbjct: 70 LGFVRDIR-IDPPPRVLVFSAITSALAVREALAAGAKGYLEKTAPFDEFKMALRSVAAGR 128 Query: 125 TFFPSETLNYIKSNK-CSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + + ++ + L+NRE +LRY+ GL +KEIAD+L LS +TV Sbjct: 129 EYLGASAKRLLQQEAHAAMRLGAGPALTNREREVLRYVAEGLGSKEIADRLALSTRTVEN 188 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H++NI + GL S+ +L+ YA LI Sbjct: 189 HRANILKRTGLRSVAQLVLYAARLGLI 215 >UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SCN0_METPP Length = 210 Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 2/200 (1%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRT-RPVDLIIMDIDLPGTDG 64 V+++D H I+R + LL+ S++ +V + D ++ R RP ++++D+ LPG G Sbjct: 5 VMLVDDHAIVREGYKRLLELQSDIVVVAEAGDGGEALNQWRALRPA-VVVIDLGLPGMGG 63 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 + R++Q ++L S + + +A++AGA G+V+K + + + AV+ + G Sbjct: 64 LELIARLRQRDEACRMLAFSMHRDAVWVAQALRAGALGYVTKSSAPSQLVAAVREVNQGR 123 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 + + S S LS RE ++R LV G + +EIA L LS KTV Sbjct: 124 RVLSPDVSGEVASALLDPQDSAAHGLSPREFEVMRLLVGGRTPQEIAQSLSLSVKTVHNV 183 Query: 185 KSNIYGKLGLHSIVELIDYA 204 I KLG S EL A Sbjct: 184 HYQIKSKLGTASDFELARMA 203 >UniRef50_B2SU06 Two-component system regulatory protein n=73 Tax=Proteobacteria RepID=B2SU06_XANOP Length = 222 Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 101/193 (52%), Gaps = 2/193 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRP-VDLIIMDIDLPGT 62 T+++I D HP+ R ++ +Q+ +L+ D+ +P DL++MD+++PG Sbjct: 2 TTLLIADDHPLFREALRGAVQRVMPGVQLLEADNVDALYTLADAQPDADLLLMDLNMPGA 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 GF+ L ++ + + V+ +S++ E RAI GA GF+ K D + I A+ +L Sbjct: 62 QGFSALVHMRSLHPQLPVVVVSAREEPTVMRRAIDHGAFGFIPKSADSDTIGRALATVLD 121 Query: 123 GYTFFPSETLNYIKSNKCSTN-SSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 G + P+E N ++ + L+ ++ +L+ L +G NK+IA L +S T+ Sbjct: 122 GERWIPAEAQNLPPTDSEEREVGQRLRDLTPQQFRVLQMLGAGRLNKQIAYDLGVSEATI 181 Query: 182 SAHKSNIYGKLGL 194 AH + I KLG+ Sbjct: 182 KAHVTAILRKLGV 194 >UniRef50_C9PHC7 Putative two-component response regulator n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PHC7_VIBFU Length = 201 Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 113/205 (55%), Gaps = 17/205 (8%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVL----KTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +I++ +P+ + ++E +++ + Q + + YR+ + PV+ ++++++ Sbjct: 8 ALIVNPYPLEQHALEDIVKSTNLFQHIHFATSAAEAYRV----VSQVPVNFVLLEVEAYD 63 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G L+R++ T K+LF+S+ + Y+ + GANG++ K + I A+ ++ Sbjct: 64 ASGLDILRRLRAKGFTGKILFISAIDKAMYSNATHKLGANGYLLKSEELPVIQEAITSVM 123 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 GY F E+ N + T LS RE + YL++G++NK+I++ L +S+KTV Sbjct: 124 RGYNVFKHESRNKERDG---------TELSKRETVVYHYLLAGMTNKKISELLSISSKTV 174 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKL 206 S +K+ I K G+ S++ELI+ AK+ Sbjct: 175 STYKTRILTKYGVKSVIELINQAKI 199 >UniRef50_Q3JL34 DNA-binding response regulator n=30 Tax=pseudomallei group RepID=Q3JL34_BURP1 Length = 223 Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 6/210 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKN-SELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 K V+++D+HPI+R IEV+L K + + + D + R RP DL+++D+ LP Sbjct: 6 KCERVLVVDSHPIVRDGIEVVLGKAYAGIDVDGAADMAEASDRCGRDRP-DLVLLDVMLP 64 Query: 61 GTDGFTFLKRIKQIQSTVK-VLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 G D + I + ++ V+F + SE A AI+ GA+G++ K + I A++ Sbjct: 65 GEDPLPAMGEILRAHPGLRFVVFTALGSEA-RAADAIRFGASGYLLKWCSPDGIVQAIRR 123 Query: 120 ILSGYTFF-PS-ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 +++G PS + + T +S V L+ RE +L+ + G+ N+EIA L +S Sbjct: 124 VMAGRVHIDPSLDEARVASAAGGRTLASPVDELTRREKQVLKLIADGMRNREIASLLNIS 183 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLY 207 KTV H+ + KLG ++ +I +A Y Sbjct: 184 PKTVDCHRQRLMQKLGARNVATVIHWAYRY 213 >UniRef50_UPI00017443BD response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017443BD Length = 217 Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 96/180 (53%), Gaps = 7/180 (3%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 + ++++D HP R + L+ S ++ + DD + R+ DL+++DI LPG D Sbjct: 21 SRILVVDDHPAFRYGLMELISNMSSAEVCGEADDAFSALAAFRSLKPDLVLLDISLPGRD 80 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G K +K +L +S +E FY RA++AGA G++ K + + A++ L Sbjct: 81 GIELTKMMKAESPRTPILIVSMHNEAFYGLRALRAGACGYLRKDDSLAHLEDAIEHALR- 139 Query: 124 YTFFPSETL------NYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 ++ S L +++S+ +T S T+ LS+RE+ + +L GLS ++IAD+L LS Sbjct: 140 QDYYLSPRLKRHLIQQFLQSSAPTTESFTLQGLSDREMEVFHWLGKGLSTRQIADRLGLS 199 >UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ84_DESAH Length = 218 Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 110/206 (53%), Gaps = 4/206 (1%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P +++++D H I+R S++ L++ ++++ + + +++IMDI++P Sbjct: 5 PITILLVDDHDILRQSLKKALEEKPNVKVLQGACNGLDAVRLTEKHCPNIVIMDINMPDL 64 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +G K+I +K++ LS + F IQAGA GF+ K + D+ A+ M+ S Sbjct: 65 NGIEAAKQIISKNPDIKIIALSMLCDEFNVKSMIQAGAKGFLLKTSSLEDLHTAILMVAS 124 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTV----LSNREVTILRYLVSGLSNKEIADKLLLSN 178 G ++ E LN + + + + + L+ RE +++ + G +++EI++KL +S Sbjct: 125 GKSYLCPEALNIMMEDIQTPGDTKLLCPLQRLTLRERGVIQLIAEGYTSQEISEKLNISK 184 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYA 204 +TV H++N KL +H+I L +A Sbjct: 185 RTVDVHRTNTMNKLKIHTIAGLTRFA 210 >UniRef50_C4KAM8 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=C4KAM8_THASP Length = 217 Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 6/205 (2%) Query: 1 MKPTS-----VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIM 55 MKP S +++ D H ++RM +LL+ + ++V + D + D+++M Sbjct: 2 MKPPSLHALRILLADDHAVVRMGFRLLLE-GAGAEVVGEADCGEAAVQAFGQLHPDVLLM 60 Query: 56 DIDLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFH 115 D+ +PG G L+R+ +VL LS+ + RA++AGA G++SK +++ H Sbjct: 61 DVSMPGIGGLGALERVLAHHPAARVLMLSAHDDAQIPARALRAGAGGYLSKRAHPDELLH 120 Query: 116 AVQMILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 AV + G + + + + V L+ +E + L G S EIA+ Sbjct: 121 AVATVARGQRYIDPAIAPALALAQFAGGGDPVAALTEKEFAVFLQLARGRSVAEIAETHS 180 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVEL 200 LS TV H +I KL + + EL Sbjct: 181 LSPSTVGTHLYHIKQKLEVSNAAEL 205 >UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9E4_9BACT Length = 227 Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 7/204 (3%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M+P SVII+D H ++ I LL+ ++ +V K + + ++ D+++ D+ +P Sbjct: 1 MQPISVIIVDDHQLMLEGIASLLRATPDITLVAKAQSAKEAFELVKQHNPDIVVADLSMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G G +++IK +++ L+ A GAN FV K + D+ + + Sbjct: 61 GVTGLDLIQQIKDAGLLTRIIMLTMHRTRLTVHEAFSVGANAFVLKSDAFEDLVDIIHRV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 G S+ L + +T LS RE +L + +GLSNKEI+ +L +S+KT Sbjct: 121 HEGENTLTSKGLPPYEPACAAT-------LSPREKDVLEGISAGLSNKEISRRLAISSKT 173 Query: 181 VSAHKSNIYGKLGLHSIVELIDYA 204 V H+S I KL + EL+ A Sbjct: 174 VETHRSRIMQKLNVTKATELVREA 197 >UniRef50_Q1MYT3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Bermanella marisrubri RepID=Q1MYT3_9GAMM Length = 198 Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 12/206 (5%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRP-VDLIIMDIDLPGTDG 64 ++I+D H + +E+++Q + E VLK DY+ + L P +DL ++D+ L + G Sbjct: 4 ILIIDDHQVYLDGLELIVQSHLEETFVLKATDYQTAHEILLAHPDIDLTLIDLSLGESSG 63 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 K +K I + V LS+ E R + GA GF+ K +D + HA+ +L G Sbjct: 64 LEVWKELKHIHGPIPVAILSASEEDVDIARCKRLGALGFIKKSSDNAVLTHAISKMLDGE 123 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 +FP Y SN + L+ R+ +L+ L GL NK I +L +S TV H Sbjct: 124 PYFP-----YDLSNIPNIE------LTPRQREVLQLLAQGLPNKAICRELNMSEATVKTH 172 Query: 185 KSNIYGKLGLHSIVELIDYAKLYELI 210 I+ L +++ + ++ A+ Y LI Sbjct: 173 LRTIFALLNVNTRTQCVNVAQQYSLI 198 >UniRef50_A6W0B9 Two component transcriptional regulator, LuxR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W0B9_MARMS Length = 213 Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 111/207 (53%), Gaps = 2/207 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V+I+D H ++ I +LQ +++V I + D+I+MD+ +PG G Sbjct: 4 VLIVDDHDVVSQGISRVLQDVKGVEVVGVVHSGEEAIIQSKILLPDIILMDVHMPGIGGL 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 K IK+I K++ LS+ + Y + ++AGA+G+++K + +++ A+QM+ G Sbjct: 64 GATKEIKRILPKTKIIALSALDDNLYPVKLLEAGASGYLTKGTNTSELLEAIQMVSKGEH 123 Query: 126 FFPSETLNYIKSNKCSTN--SSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + + +K S + S + LS+RE+ + + +V + EIA+ L +S KTVS Sbjct: 124 YISKSIAQKMALSKFSIDGQGSPLGQLSDRELQVAQMIVDCKKSNEIAEHLCVSPKTVST 183 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 +++ I+ KL + S VELI A Y ++ Sbjct: 184 YRTRIFTKLNIESDVELIRLAVRYNVL 210 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 97/192 (50%), Gaps = 3/192 (1%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V+I D H ++R + L+ +++ + D + D+I++D+ +PG DG Sbjct: 10 VLIADDHRMVRQGLRTFLELQEGIEVAGEAADGAECAERAAELEPDVILLDLVMPGVDGV 69 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 ++ +++ ST +VL ++S ++ AI+AGA G+V K D + AV+ + +G+ Sbjct: 70 GAMELLREAGSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAVRSVHAGHV 129 Query: 126 FFPSETLNYI---KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 E + SN + L+ RE +L + G +N+EIA L+L+ KTV Sbjct: 130 LLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARALVLAEKTVK 189 Query: 183 AHKSNIYGKLGL 194 H SNI KLG+ Sbjct: 190 THVSNILMKLGV 201 >UniRef50_A5FIE9 Two component transcriptional regulator, LuxR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FIE9_FLAJ1 Length = 213 Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 2/206 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M +++I D H + I LL++ + I+ K + ++ ++ VD II+DI +P Sbjct: 1 MNQINLLIADDHTMFLQGIISLLEQEPNITIIDKAVNGIEALEIIKKGVVDFIILDISMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 DG K +K+ VK+L +S+ S R I+ G NG++ K + ++ A+ I Sbjct: 61 EMDGIELSKILKKQHPNVKILIVSTHSNVMIVSRLIRIGVNGYLLKNAAKEELLKAINTI 120 Query: 121 LSGYTFFPSETLNYIKSN--KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 SG +F E SN K S +T LS+RE IL + + EIA+K +S Sbjct: 121 ASGENYFAEELEEKHLSNSSKIEKQVSNLTELSSREKEILVLIAHEYNTAEIAEKTFISL 180 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYA 204 TV+ H+ N+ KL + L+ YA Sbjct: 181 NTVNTHRRNLLSKLNAKNTAGLVKYA 206 >UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K960_AZOSB Length = 209 Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 1/205 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V+I D H ++R + L E IV + + + ++ +RT D++++DI LP +G Sbjct: 4 VLIADDHAVVRGGLRQFLSSTEEFDIVAEAANGQTALELVRTSGCDVVLLDITLPDLNGL 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 LKRIK+ + + VL S SE +A A+ AGA+G+++K + I A+ +++G Sbjct: 64 EVLKRIKRSKPDLPVLIFSMFSEDEFALPALNAGASGYLNKDSPPAQILAALHTVVAGAR 123 Query: 126 FF-PSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 + PS + LS RE+ +L L G+ I ++ LS KT+S + Sbjct: 124 YVSPSLAERLLAGTMSPGKRLPHENLSPREMAVLLLLSKGVPLTRIGEQFHLSVKTISTY 183 Query: 185 KSNIYGKLGLHSIVELIDYAKLYEL 209 ++ I KL L S E+ Y ++L Sbjct: 184 RARILEKLDLASNAEITRYVLQHKL 208 >UniRef50_B1XRB7 Response regulator receiver, LuxR domain n=14 Tax=Cyanobacteria RepID=B1XRB7_SYNP2 Length = 231 Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 7/197 (3%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P V++++ + R+ + LQ+ + L+I + +D +D + + D+II+D+ LPG Sbjct: 4 PLKVLLIEDDELFRLGLATRLQQEALLEITAEAEDGETALDLITKQEFDIIILDVGLPGI 63 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G ++IKQ Q + +L L+S S+ R I+A A G+ K D + A+Q I + Sbjct: 64 GGVETCRQIKQQQPQLPILVLTSHSQPTLINRLIEAQAQGYCLKGVDAESLILAIQSIAA 123 Query: 123 GYTFFPSETLNYIKS---NKCSTNSSTVTV----LSNREVTILRYLVSGLSNKEIADKLL 175 G +++ ++ I++ + +V L+ RE IL + +G SN EIA+ L Sbjct: 124 GASWWDAQATQQIRAQFQQPMAEMPRSVPAQDNPLTQREGEILALIANGKSNSEIAETLY 183 Query: 176 LSNKTVSAHKSNIYGKL 192 ++ TV H I KL Sbjct: 184 IAASTVRVHVHAILQKL 200 >UniRef50_C0YMY4 Response regulator n=2 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YMY4_9FLAO Length = 204 Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 63/208 (30%), Positives = 114/208 (54%), Gaps = 14/208 (6%) Query: 6 VIIMDTHPIIRMSIEVLLQKN-SELQIVLKTDDYRITIDYLRTR----PVDLIIMDIDLP 60 ++I D H ++R+ ++L+KN +++++ D+ T D + + DL+I+DI+LP Sbjct: 5 ILIADDHHVVRIGTALILEKNFNDIEV-----DFAETYDEAKQKIESGTFDLLILDIELP 59 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G+ + +K IK I +L +S E A + I+ GANGF++K +D AV++I Sbjct: 60 GSILKSMVKEIKSISPETFILIFTSYKENI-ALQYIEEGANGFLNKQSDPEHFVKAVEVI 118 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 ++ SE +N I K + + LS RE+ + L G N EIA+ L + T Sbjct: 119 FKDGYYYTSEMMNEIL--KGNQRKKAIENLSERELQVFNLLAKGNGNLEIANTLNIEEST 176 Query: 181 VSAHKSNIYGKLGLHSIVELID-YAKLY 207 V +K +Y KL + ++VEL++ Y++++ Sbjct: 177 VGTYKRRVYQKLKISNLVELLEIYSEIH 204 >UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobacteria RepID=GACA_PSEU2 Length = 214 Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 105/197 (53%), Gaps = 2/197 (1%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V+++D H ++R I +L LQ+V + D ++ R D+++MD+ +PG G Sbjct: 4 VLVVDDHDLVRTGITRMLADIDGLQVVGQADSGEESLKKARELKPDVVLMDVKMPGIGGL 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 +++ + +KV+ ++ E + R +QAGA G+++K ++ A++++ +G Sbjct: 64 EATRKMLRSHPDIKVVAVTVCEEDPFPTRLLQAGAAGYMTKGAGLAEMVQAIRLVFAGQR 123 Query: 126 FFPSETLNY--IKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + + +KS + N+S +LS RE+ I +V + I+DKL LS KTV+ Sbjct: 124 YISPQIAQQLALKSFQPQVNNSPFDLLSEREIQIALMIVGCQKVQTISDKLCLSPKTVNT 183 Query: 184 HKSNIYGKLGLHSIVEL 200 ++ I+ KL + S VEL Sbjct: 184 YRYRIFEKLSISSDVEL 200 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 280 2e-74 UniRef50_P0AEL9 Fimbriae Z protein n=80 Tax=Enterobacteriaceae R... 275 4e-73 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 272 4e-72 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 272 7e-72 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 272 7e-72 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 271 8e-72 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 271 1e-71 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 271 1e-71 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 270 2e-71 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 270 2e-71 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 270 3e-71 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 269 5e-71 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 268 8e-71 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 268 9e-71 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 267 1e-70 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 267 2e-70 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 267 3e-70 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 266 3e-70 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 265 5e-70 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 265 1e-69 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 264 1e-69 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 264 1e-69 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 263 2e-69 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 263 2e-69 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 263 3e-69 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 263 3e-69 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 263 3e-69 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 263 3e-69 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 262 5e-69 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 262 5e-69 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 262 5e-69 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 262 6e-69 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 262 6e-69 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 262 6e-69 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 262 6e-69 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 262 6e-69 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 262 7e-69 UniRef50_C6XAP6 Two component transcriptional regulator, LuxR fa... 262 8e-69 UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa... 261 9e-69 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_C7RMN3 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 260 2e-68 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 260 3e-68 UniRef50_C0N6H7 Response regulator receiver domain protein n=1 T... 259 3e-68 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 259 4e-68 UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR fa... 259 5e-68 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 258 6e-68 UniRef50_B2JSN3 Two component transcriptional regulator, LuxR fa... 258 7e-68 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 258 7e-68 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 258 9e-68 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 258 1e-67 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 258 1e-67 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 258 1e-67 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 258 1e-67 UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92... 258 1e-67 UniRef50_Q04VJ6 Receiver component of a two-component response r... 257 2e-67 UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR fa... 256 3e-67 UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding... 256 3e-67 UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib... 255 5e-67 UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 255 5e-67 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 255 5e-67 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 255 5e-67 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 255 7e-67 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 255 7e-67 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 255 7e-67 UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ... 255 7e-67 UniRef50_A4TJY3 Two-component response regulator n=27 Tax=Yersin... 255 8e-67 UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa... 255 8e-67 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 255 9e-67 UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobact... 254 1e-66 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 254 1e-66 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 254 2e-66 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 254 2e-66 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 254 2e-66 UniRef50_A1K960 Probable transcriptional regulator, LuxR family ... 253 2e-66 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 253 2e-66 UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobact... 253 2e-66 UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR fa... 253 2e-66 UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=... 253 3e-66 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 253 3e-66 UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, ... 253 3e-66 UniRef50_Q13QW9 Two component transcriptional regulator, LuxR fa... 252 4e-66 UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC... 252 5e-66 UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl... 252 7e-66 UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrh... 252 8e-66 UniRef50_A5WFD3 Two component transcriptional regulator, LuxR fa... 252 8e-66 UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 251 1e-65 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 251 1e-65 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 250 2e-65 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_A6BYP5 Response regulator receiver domain protein n=1 T... 250 2e-65 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_C5UZV9 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_C4XMF2 NarL family two-component response regulator n=1... 250 3e-65 UniRef50_A1WT06 Two component transcriptional regulator, LuxR fa... 250 3e-65 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 250 3e-65 UniRef50_B6A2W0 Two component transcriptional regulator, LuxR fa... 250 3e-65 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 249 4e-65 UniRef50_Q47DK2 Two component transcriptional regulator, LuxR fa... 249 4e-65 UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga t... 249 5e-65 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 248 6e-65 UniRef50_Q47FR0 Two component transcriptional regulator, LuxR fa... 248 7e-65 UniRef50_C0GJ72 Two component transcriptional regulator, LuxR fa... 248 7e-65 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 248 7e-65 UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=... 248 8e-65 UniRef50_B6JD38 Two component transcriptional regulator, LuxR fa... 248 8e-65 UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR fa... 248 9e-65 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 248 9e-65 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 248 9e-65 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 248 1e-64 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 248 1e-64 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 248 1e-64 UniRef50_UPI0001C314AF two component transcriptional regulator, ... 248 1e-64 UniRef50_B4D2X8 Two component transcriptional regulator, LuxR fa... 247 1e-64 UniRef50_C1A5E6 NarL family two-component response regulator n=1... 247 2e-64 UniRef50_C5V5K1 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 ... 247 2e-64 UniRef50_C4XNR8 NarL family two-component response regulator n=1... 247 2e-64 UniRef50_A2SLK8 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR fa... 247 3e-64 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 246 3e-64 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 246 3e-64 UniRef50_C6WV69 Two component transcriptional regulator, LuxR fa... 246 4e-64 UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi... 246 4e-64 UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1... 246 4e-64 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 246 4e-64 UniRef50_Q39TN7 Two component transcriptional regulator, LuxR fa... 246 5e-64 UniRef50_A9AX03 Two component transcriptional regulator, LuxR fa... 246 5e-64 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 245 5e-64 UniRef50_A1VT42 Two component transcriptional regulator, LuxR fa... 245 6e-64 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 245 6e-64 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 245 6e-64 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 245 8e-64 UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betapro... 245 9e-64 UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 ... 245 9e-64 UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobac... 245 1e-63 UniRef50_B4DAD9 Two component transcriptional regulator, LuxR fa... 244 1e-63 UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium... 244 1e-63 UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n... 244 1e-63 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 244 2e-63 UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ecto... 244 2e-63 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 244 2e-63 UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Synt... 244 2e-63 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 243 2e-63 UniRef50_A1VB77 Two component transcriptional regulator, LuxR fa... 243 2e-63 UniRef50_Q027R2 Two component transcriptional regulator, LuxR fa... 243 2e-63 UniRef50_B3PFS2 GacA n=1 Tax=Cellvibrio japonicus Ueda107 RepID=... 243 2e-63 UniRef50_C1SMK1 Response regulator containing a CheY-like receiv... 243 3e-63 UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacilla... 243 3e-63 UniRef50_Q5NZZ3 Two-component system response regulator n=3 Tax=... 243 3e-63 UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 T... 243 3e-63 UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy... 243 3e-63 UniRef50_A9AZR3 Two component transcriptional regulator, LuxR fa... 243 4e-63 UniRef50_Q0A525 Two component transcriptional regulator, LuxR fa... 243 4e-63 UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax... 243 4e-63 UniRef50_A1TVD4 Two component transcriptional regulator, LuxR fa... 243 4e-63 UniRef50_UPI00017452CB response regulator with a HTH DNA-binding... 243 4e-63 UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR fa... 243 4e-63 UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microsc... 242 4e-63 UniRef50_C6C961 Two component transcriptional regulator, LuxR fa... 242 5e-63 UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 T... 242 5e-63 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 242 5e-63 UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacill... 242 5e-63 UniRef50_B4DA09 Two component transcriptional regulator, LuxR fa... 242 5e-63 UniRef50_C6DD36 Two component transcriptional regulator, LuxR fa... 242 6e-63 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 242 7e-63 UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paeniba... 242 7e-63 UniRef50_Q39C19 Two component transcriptional regulator, LuxR fa... 242 8e-63 UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR fa... 241 1e-62 UniRef50_C1TL94 Response regulator containing a CheY-like receiv... 241 1e-62 UniRef50_B8ET67 Two component transcriptional regulator, LuxR fa... 241 1e-62 UniRef50_B3RA82 Response regulator protein; Response regulator r... 240 2e-62 UniRef50_B1Y741 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_C4ZM15 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_D1B9T1 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_C4KAM8 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_C0GHS5 Two component transcriptional regulator, LuxR fa... 240 3e-62 UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=P... 240 3e-62 UniRef50_C7LQH4 Two component transcriptional regulator, LuxR fa... 240 3e-62 UniRef50_D2QF32 Two component transcriptional regulator, LuxR fa... 240 3e-62 UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms Re... 240 3e-62 UniRef50_Q3K943 Putative LuxR family response regulator n=4 Tax=... 240 3e-62 UniRef50_C7I0E4 Two component transcriptional regulator, LuxR fa... 240 3e-62 UniRef50_C4XSZ8 NarL family two-component response regulator n=2... 240 3e-62 UniRef50_B1ZT64 Two component transcriptional regulator, LuxR fa... 240 3e-62 UniRef50_B7AAT6 Two component transcriptional regulator, LuxR fa... 240 3e-62 UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methyli... 239 4e-62 UniRef50_C6C0G1 Two component transcriptional regulator, LuxR fa... 239 4e-62 UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR fa... 239 4e-62 UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=M... 239 5e-62 UniRef50_B1ZWL0 Two component transcriptional regulator, LuxR fa... 239 5e-62 UniRef50_Q2W107 Response regulator containing a CheY-like receiv... 238 6e-62 UniRef50_Q021D5 Two component transcriptional regulator, LuxR fa... 238 6e-62 UniRef50_A5FIE9 Two component transcriptional regulator, LuxR fa... 238 7e-62 UniRef50_Q2YB36 Two component transcriptional regulator, LuxR fa... 238 7e-62 UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opit... 238 9e-62 UniRef50_C7PMV2 Two component transcriptional regulator, LuxR fa... 238 9e-62 UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryoc... 238 9e-62 Sequences not found previously or not previously below threshold: UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 254 2e-66 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 253 2e-66 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 252 5e-66 UniRef50_Q15T22 Two component transcriptional regulator, LuxR fa... 252 5e-66 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 252 9e-66 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 251 1e-65 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 250 3e-65 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 249 4e-65 UniRef50_B0C955 Two-component transcriptional regulator, LuxR fa... 248 7e-65 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 247 1e-64 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 247 2e-64 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 247 3e-64 UniRef50_A0NNP3 Response regulator containing a CheY-like receiv... 246 4e-64 UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa... 246 4e-64 UniRef50_P55184 Uncharacterized transcriptional regulatory prote... 245 5e-64 UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac... 245 9e-64 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 245 9e-64 UniRef50_A7NP18 Two component transcriptional regulator, LuxR fa... 245 1e-63 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 245 1e-63 UniRef50_C5T9P3 Two component transcriptional regulator, LuxR fa... 244 2e-63 UniRef50_D1VBH1 Two component transcriptional regulator, LuxR fa... 243 2e-63 UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family prot... 243 3e-63 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 243 4e-63 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 243 4e-63 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 242 5e-63 UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T... 242 8e-63 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 241 1e-62 UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID... 241 1e-62 UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR fa... 241 1e-62 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 241 2e-62 UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_C5C7H0 Response regulator containing a CheY-like receiv... 240 2e-62 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 240 3e-62 UniRef50_C3JVF4 Two component transcriptional regulator, LuxR fa... 240 3e-62 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 239 4e-62 UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacilla... 239 5e-62 UniRef50_C1RMQ2 Response regulator containing a CheY-like receiv... 239 5e-62 UniRef50_Q2IIQ2 Two component transcriptional regulator, LuxR fa... 238 7e-62 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 280 bits (718), Expect = 2e-74, Method: Composition-based stats. Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 6/216 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M V++ + H I+R + LL ++++V + ++ R I + D+++MDI +P Sbjct: 1 MNKIKVLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREAIKMVEELAPDVVLMDISMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 +G +++K+ VK+L LS S Y ++AGA+G++ K + D+ A+ Sbjct: 61 ELNGMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHAA 120 Query: 121 LSGYTFFPSETLNYIKSNKCST------NSSTVTVLSNREVTILRYLVSGLSNKEIADKL 174 +G F + N + +LS RE +L+ + G +N+EIA L Sbjct: 121 HAGDCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGHL 180 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S KTV AH+++I KLGL+ EL YA L+ Sbjct: 181 YISPKTVEAHRNHIQKKLGLNGTAELTKYAIRKGLV 216 >UniRef50_P0AEL9 Fimbriae Z protein n=80 Tax=Enterobacteriaceae RepID=FIMZ_ECO57 Length = 210 Score = 275 bits (706), Expect = 4e-73, Method: Composition-based stats. Identities = 210/210 (100%), Positives = 210/210 (100%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP Sbjct: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI Sbjct: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT Sbjct: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 VSAHKSNIYGKLGLHSIVELIDYAKLYELI Sbjct: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 272 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 60/209 (28%), Positives = 107/209 (51%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 KP V+++D H ++ L++ E+++V + ++ ++ D+++MD+ +P Sbjct: 7 KPIRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPI 66 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G + IK+ KVL L+ Y + +QAGA G++ K + A++ + Sbjct: 67 MNGIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVH 126 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 G T+F T + + S + ++ LS RE ILR + G S+K+IA L +S +TV Sbjct: 127 QGATYFCESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNISYRTV 186 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 H+ NI KL +HS EL YA + L+ Sbjct: 187 ETHRQNIKHKLDIHSTAELAQYALQHGLL 215 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 272 bits (696), Expect = 7e-72, Method: Composition-based stats. Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 6/216 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M T +++ D H + R + LL +++++ + + + + D+++MDI + Sbjct: 1 MSKTKILLTDDHTLFRQGVRTLLAAEADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMA 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G F + I++ + VKV+FLS + Y + GANG++ K + + + A++ + Sbjct: 61 GMSSFEATRLIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAIREV 120 Query: 121 LSGYTFFPSETLN------YIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKL 174 G ++ L+ ++ T S L+ RE IL+ L G S KEIA Sbjct: 121 QRGGSYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAFF 180 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 LS KTV AHK N+ KL +H+ +L+ YA ++I Sbjct: 181 ELSVKTVEAHKFNLMRKLDIHNKAQLVQYAIQKKII 216 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 272 bits (696), Expect = 7e-72, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 114/210 (54%), Gaps = 2/210 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MKPT V++ D H ++R I LL+ ++++V + D T+ +R DL+++D+++P Sbjct: 1 MKPTKVLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G T +K+IK+I +KVL L+ E Y I++GA G++ K ++ A+ + Sbjct: 61 RMGGITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAIDKV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 + G FP T N ++ + V LS+RE +L L G+SNK+IA +L +S KT Sbjct: 121 IKGDKVFPRSTENEVR--EVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEKT 178 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V H SNI KL ++ + + A L+ Sbjct: 179 VKNHVSNILRKLSVNDRTQAVIVALKRGLV 208 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 271 bits (695), Expect = 8e-72, Method: Composition-based stats. Identities = 60/211 (28%), Positives = 110/211 (52%), Gaps = 2/211 (0%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +P +++++D HP++R LL+ ++L++V + + I R D+I+MD+ +PG Sbjct: 13 RPITLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKARQLMPDVILMDVSMPG 72 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G + IK + V +L L+S + Y ++AGA G++ K ++++ AV+ + Sbjct: 73 MNGIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVRAVA 132 Query: 122 SGYTFFPSETLNYIKSNKCS--TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 +G + + + T + LS RE+ +LR +G +NKEIA L +S + Sbjct: 133 AGESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDISPR 192 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H +NI+ KLG+ S E + Y I Sbjct: 193 TVQVHLANIFSKLGVGSRTEAVLYGIKRGWI 223 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 4/212 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 + +++I D H ++R I +L+ +LQ+V + + I+ R +IIMDI++PG Sbjct: 5 EKITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEAIEMTRRYQPQVIIMDINMPG 64 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G K I+Q + +L L+ + Y +++G +G+V K ++ AV + Sbjct: 65 LNGIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQAVYQVA 124 Query: 122 SGYTFFPSETLNY----IKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 G I+ K T + L+ RE IL ++ G SN+EIA +L +S Sbjct: 125 RGARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIARELFIS 184 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 KTV H ++I+ K+G+ + YA + L Sbjct: 185 EKTVKNHLTHIFHKIGVSDRTQAALYALKHGL 216 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 14/220 (6%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 T ++++D H + R I+ +L + ++V + D + + D++IMDI++P Sbjct: 36 KTRIVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEALALVERYKPDVVIMDINMPHV 95 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +G +++ + KV+ LS + Y A+Q GA G++ K D + + AV+++ Sbjct: 96 NGVEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRVVAE 155 Query: 123 GYTFFPSETLNYI--------------KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNK 168 G ++ + + + K + +L+ RE +L+ L G SNK Sbjct: 156 GGSYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGKSNK 215 Query: 169 EIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYE 208 IAD L +S KTV H SNI KL ++ + + A Sbjct: 216 GIADALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKNG 255 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 270 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 12/222 (5%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M P +++I+D HP+ R I L++N + IV + D + D+I++D+ LP Sbjct: 1 MSPINILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLADELSPDVILVDLSLP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G +G + +K+ Q V+ L+ + AI+AGA+ + +K + + + + Sbjct: 61 GMNGLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVITRV 120 Query: 121 LSGY----------TFFPSETLNYIK--SNKCSTNSSTVTVLSNREVTILRYLVSGLSNK 168 G F S L+ + S T+S + L+ RE+ IL + G SNK Sbjct: 121 ARGEYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGYSNK 180 Query: 169 EIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 EIA L +S++TV H ++I KL ++ + + YA + I Sbjct: 181 EIAQALNISDQTVKNHITSILRKLAVNDRTQAVIYALRHGWI 222 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 270 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 1/209 (0%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +P V+++D HP++R + LL++ ++V + D I + + D+++MD+ +PG Sbjct: 17 EPIRVLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPG 76 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G + + + + VL L+ + A++AGA G+V K D ND AV+ + Sbjct: 77 VTGIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAVA 136 Query: 122 SGYTFFPSETLNYIKSNKCS-TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 G + I+ + S L+ RE IL L SG SN EIA +L LS KT Sbjct: 137 RGEAVYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLSQKT 196 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 V H ++I+ KL + + + A+ L Sbjct: 197 VKNHLTSIFAKLQVADRTQAVVRARRAGL 225 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 54/206 (26%), Positives = 104/206 (50%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 VII D H ++R + +L++ S+ ++V + +R +I++D+ +PG + Sbjct: 2 IRVIIADDHTVVRNGLRHILERTSDFEVVGEAARGTEVPQLVRELSPHVILLDLSMPGRN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +++++ +++L L+ +E Y RA +AGA G+++K + ++ A++ + +G Sbjct: 62 GLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAAGYLTKESAATELVEALRKVAAG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 T+ + + LS+RE+ + R +V G S +IA L +S KTVS Sbjct: 122 GTYVSPAMAEKLALGLQEKPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSAKTVST 181 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYEL 209 +K + KL L S L+ YA L Sbjct: 182 YKMRLMEKLQLRSDAALVRYAIEARL 207 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 1/207 (0%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 V I D HP++R ++ LL ++ + + ID D+ ++D +PG G Sbjct: 4 RVFIADDHPVVRQGLKQLLGAEADFSVAGEASSGHEVIDQCGRFAWDVAVLDYRMPGKGG 63 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 +K ++Q VL LS E YA R ++AGA G+++K + D+ +A++ + G Sbjct: 64 IDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAAGYLTKESAPEDLVNAIRKVARGG 123 Query: 125 TFFPSETLNYIKSNKCSTNSSTVT-VLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 F + + + + + LS+RE I+ L SG EIA +L LS T+S Sbjct: 124 RFVSAALGEQLALSLSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLSPNTIST 183 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 ++ I KL L S EL+ YA ++L+ Sbjct: 184 YRKRILEKLDLKSNAELMRYAIGHQLV 210 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 268 bits (687), Expect = 8e-71, Method: Composition-based stats. Identities = 63/215 (29%), Positives = 109/215 (50%), Gaps = 5/215 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MK +++ D H ++R + +LL+ + Q++ D R + D+++MD+ +P Sbjct: 1 MKTIRILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G +G ++I ++FLS S+ Y +A++AGA ++ K + ++D+ AV + Sbjct: 61 GLNGIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIAV 120 Query: 121 LSGYTFFPSETL-----NYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 G FF +Y++ + + +L+ RE +L+ L G +NKE+A L Sbjct: 121 SEGKAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAILN 180 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 LS TV H+ NI KL LHS ELI YA +I Sbjct: 181 LSLYTVETHRGNILQKLNLHSGAELILYAIRKGVI 215 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 268 bits (687), Expect = 9e-71, Method: Composition-based stats. Identities = 55/215 (25%), Positives = 107/215 (49%), Gaps = 7/215 (3%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P V++ D H + R +E++L++ ++Q+V + D + D++++D+ +P Sbjct: 86 PIKVLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETLPDVVLLDVRMPKR 145 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G IK++ + K++ L+ E AI+AGA G++ K +++ A++ + Sbjct: 146 TGIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIRAVHG 205 Query: 123 GYTFFPSETLNYIKSNKCS-------TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 G + + + + S + L+ RE+ +LR + GL+N++IA +L Sbjct: 206 GQSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQLF 265 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S TV H NI KL LHS +E + YA +L+ Sbjct: 266 ISENTVKNHVRNILEKLQLHSRMEAVVYAVREKLL 300 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 267 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 112/210 (53%), Gaps = 4/210 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +V++ D H I+R + LL+ + + +V + ++ + TI R ++IIMDI +P + Sbjct: 3 VNVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARELHPEIIIMDISMPDMN 62 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++I +KV+ LS ++ + ++AGA+G++ K ++ +A+Q +LS Sbjct: 63 GIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQTVLSN 122 Query: 124 YTFFPSETLNYIKSNKCSTNSST----VTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 +T+ + + N + T + L+ RE +L+ L GLS K+IA L +S K Sbjct: 123 HTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLHVSVK 182 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 TV H+ NI KLG+ S+ ELI YA L Sbjct: 183 TVETHRRNITQKLGVGSVAELIKYAIREGL 212 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 267 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 105/212 (49%), Gaps = 3/212 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 + V+I+D H + R + L++ + +++V + + + + + D+++MDI++PG Sbjct: 26 RRIRVLIVDDHDLFREGLRQLIETDPAIEVVGEAANGQDALKMVAELQPDVVLMDINMPG 85 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG + I Q V VL L+ + Y AI+AGA ++ K + ++ A+ + Sbjct: 86 MDGIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLRAIHVAA 145 Query: 122 SGYTFFPSETLNYIK---SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 G + + + + LS+RE+T+LR L G +N++IAD L L+ Sbjct: 146 EGGATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADALNLAE 205 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV + S ++ KLG+ + + YA + L+ Sbjct: 206 STVKNNLSALFQKLGVRDRTQAVIYAISHGLV 237 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 4/208 (1%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P V+I+D HP++ I+ +L+ ++++V R I D+I+MD+++P Sbjct: 23 PIRVLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVPDVILMDLNMPDV 82 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G + + I++ ++VL LS Y A+ GA G+V K +I A+ ++ Sbjct: 83 GGLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAVMR 142 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G + + + ++ L+ RE TIL L G SNKE+A L +S +TV Sbjct: 143 GEQYLCTGAAGSLSPQSQTSR----EALTGREQTILLELAQGKSNKEVAQALDISVRTVE 198 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 H+ NI KLG+ S L YA + ++ Sbjct: 199 THRKNIKRKLGISSTAGLTRYALEHGVL 226 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 53/213 (24%), Positives = 105/213 (49%), Gaps = 5/213 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K +V+I D H ++R ++ +++ +++++ D + + D++++DI +P Sbjct: 9 KKINVLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKTQQLSPDVVLLDISMPK 68 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G L+R+K + ST+K++ L+ + Y I GANG+V K + + A++ + Sbjct: 69 QNGIQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIRDVY 128 Query: 122 SGYTFFPSETLNYI-----KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 G + + + S + L+ RE +L L G++NKEI D L + Sbjct: 129 QGLNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGDCLFI 188 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 S KTV H SNI+ K+ ++ + YA + + Sbjct: 189 SEKTVKNHVSNIFKKINVNDRTQAAIYAYKHNI 221 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 265 bits (680), Expect = 5e-70, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 117/213 (54%), Gaps = 4/213 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 ++I + H ++R ++ L+ SE Q+V + D+ I+ R DLI++D+ +P Sbjct: 4 STIKILITEDHALVRKGLKSLISSRSEFQVVGEADNGLAAIEMTRKCKPDLILLDLSMPK 63 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G ++++K+ + VK+L ++ + Y A++ GA+G++ K +D ++F A++ I+ Sbjct: 64 MNGLATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAIRAIM 123 Query: 122 SGYTFFPSETLNYIKSNKCSTN----SSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 G + S+ + + + + + + L+ RE + + + G +N++IAD L +S Sbjct: 124 DGKAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADLLFIS 183 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 KTV H++N+ KL LHS E+ ++A +I Sbjct: 184 PKTVDKHRTNLMKKLDLHSAREVSNFALKNGII 216 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 8/216 (3%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTR-----PVDLIIMDI 57 T +++ D H ++R + ++L +L +V + D I+ +R R VDL ++D+ Sbjct: 27 KTRILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVLDV 86 Query: 58 DLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAV 117 +P G + + ++ +++L L+ Y A++AGA G+V K D+ A Sbjct: 87 AMPRMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQAC 146 Query: 118 QMILSGYTFFPSETLNYIKS---NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKL 174 + + G F ++ + + T L+ RE IL+ + G S++EIAD L Sbjct: 147 RAAVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIADTL 206 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S KTV H++NI KLG+ +EL YA LI Sbjct: 207 FISVKTVERHRANILAKLGMKDRLELTRYAIRTGLI 242 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 57/214 (26%), Positives = 113/214 (52%), Gaps = 6/214 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 T ++++D HP+ R ++ +L ++ ++ + DD I+ D+IIMDI +PG Sbjct: 2 KTRIMLVDDHPVFRSGLKHILCTEADYHVIAEADDGESAIEMAAEANPDIIIMDISMPGL 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG + IK+ +++L L+ ++ + ++ AGA+G+V K ++ HAV+++++ Sbjct: 62 DGIEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKLVMN 121 Query: 123 GYTFFPSETLNYI------KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 G + + + + + S +S+ LS RE +L+Y+ G + KEI+ +L + Sbjct: 122 GEHYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTELFI 181 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S KTV +K + K+G L+ YA + +I Sbjct: 182 SIKTVDTYKKRVMEKIGSKKKSALVRYALKHNII 215 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 51/210 (24%), Positives = 101/210 (48%), Gaps = 3/210 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V++ D H I+R + LL K+++ +V + + ++ + ++DI +P + Sbjct: 2 IRVMLADDHTILRQGLVSLLSKDADCTVVAEASNGLEAVEKALETRPQVAVIDISMPELN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +KRI K+L L+ E Y ++AGA+G++ K + ++ AV+ + +G Sbjct: 62 GMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKALATG 121 Query: 124 YTFFPSETLNYIKSNKCSTNS---STVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 T++ + + + + L+ RE + +V G + K+IA L +S KT Sbjct: 122 KTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDISVKT 181 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 H+ + KLG+ + EL+ YA + L+ Sbjct: 182 AENHRGKVLDKLGVSNTAELVRYAAKHNLL 211 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 105/206 (50%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 +++++ H I+R + L+ E +IV + ++ + ++RT D+++MD+ +P Sbjct: 14 KIKLLLVEDHHIVRRGLVFFLKTREEFEIVGEAENGEDALTFVRTERPDVVLMDLSMPKM 73 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG K+IKQ T+K+L LSS SE Y A++AGA+G+ K + ++ I Sbjct: 74 DGIEATKQIKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIAIYE 133 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G F + + + ++L+ RE +L+ + G SNKEIA +L ++ +TV Sbjct: 134 GNANFHPKVTPALLGRSAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQTVK 193 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYE 208 H SNI KL + + YA + Sbjct: 194 THVSNILAKLEVDDRTQAALYAVKHG 219 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 263 bits (674), Expect = 2e-69, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 104/212 (49%), Gaps = 4/212 (1%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P +++ D H ++R I LL+K + IV + D R T+ + T D+ IMDI +PG Sbjct: 4 PLKIVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRETVTLVHTFAPDIAIMDITMPGL 63 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +GF RI + KVL LS + Y +A++AGA G++ K ++ A+ + Sbjct: 64 NGFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNAVRK 123 Query: 123 GYTFFPS----ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 G T+ L + + + L+ R I++ + G S KEIA L LS Sbjct: 124 GETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLNLSV 183 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 KT+ H+ ++ +LGLH + ++ YA LI Sbjct: 184 KTIETHRMHLMARLGLHDVAGVVRYALRTGLI 215 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 58/209 (27%), Positives = 110/209 (52%), Gaps = 2/209 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V++ D H I+R + +++ + +++++++ + + ID D+ ++DI +PG D Sbjct: 2 IRVLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHCPDVAVVDISMPGID 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + R+ + +L L+ E Y RAI+AGA G+++K + + A++ + SG Sbjct: 62 GLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKLHSG 121 Query: 124 YTFFPSETLNYIKSN--KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 F E + + S S + LS RE+ +LR+L SG +N+EIAD +S KTV Sbjct: 122 SRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISVKTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +++ + KL L + ++ +A LI Sbjct: 182 DTYRARLLKKLNLRNNADISRFAIQNNLI 210 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 1/209 (0%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +P +++ D H ++R + +LL + +V + D ++ PVD+ ++D+ +P Sbjct: 6 EPLRILLADDHRVLRKGLSLLLSSEEDFSVVAEASDGEEALEKAAKTPVDIALLDLSMPH 65 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G L+R+K +Q V+VL L+ SE Y ++AGANG++ K ++F A++ + Sbjct: 66 MGGLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALRTVA 125 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 +G + + LS RE +L +V G S IADKL LS KTV Sbjct: 126 AGGRYLGEREAELLIDGALEEPEEP-AALSTREREVLELIVHGYSLSTIADKLYLSIKTV 184 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S +K+ + KL EL+DYA + ++ Sbjct: 185 STYKTRLLQKLDCTQNSELVDYALRHNIL 213 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 5/214 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 + V++++ H I+R ++ LL +L++V + D R ++ D+++MDI++P Sbjct: 3 QTVRVLLVEDHTIVREGLKALLTATEDLEVVGEVADGRAAVEAAERLAPDVVVMDINMPK 62 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG + I++ + +VL LS Y AI+AGA+G++ K + +D+ A++ + Sbjct: 63 LDGVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIREVA 122 Query: 122 SGYTFFPSETLNYIKS-----NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 G FF + L+ RE +L + G S+ EIA L L Sbjct: 123 GGNAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKILGL 182 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S KT+ H+ I KLG+H++ L+ A L+ Sbjct: 183 SVKTIEGHRGRIMAKLGVHNVAGLVRQAIRIGLV 216 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 6/212 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D H + R + +L+ + +V + + R I+ +T D+ ++DI +P + Sbjct: 10 IKVLVVDDHELFRRGVVTVLRSTPGIYVVGEAGNGREAIECFQTLQPDVTLLDIHMPVCN 69 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +++++ K+L L+ A+++GA+G+V K + V+ + G Sbjct: 70 GLETARKMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECVRQVYEG 129 Query: 124 YTFFPSETLNYIKSNKCST------NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 PS + + T +S +VT L+ RE +L+YL +G SNKEIA L +S Sbjct: 130 EPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIARALFIS 189 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 TV H +I KL L + + YA + Sbjct: 190 ENTVRNHVRHILDKLHLSNRAQAAAYAVRNGI 221 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 5/212 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP-GT 62 V I D H ++R ++ ++++V + D + D + ++++DI +P G Sbjct: 2 IDVAIADDHAVVRQGFAFIINSQCDMRVVGEAADGKEAYDLVARVEPHVLLLDISMPPGE 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +G +RI + +++ L+ E Y ++ GA G+V K + + A++ + + Sbjct: 62 NGLIACERISCDFPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKVAT 121 Query: 123 GYTFFPSETLNYIKS----NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 G T+ + + LS+RE I L G +NKE ADKL +S Sbjct: 122 GETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFISV 181 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 KTV H+S IY KLG++S EL+ A Y L+ Sbjct: 182 KTVETHRSKIYAKLGVNSRAELVHLALKYHLL 213 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 60/215 (27%), Positives = 111/215 (51%), Gaps = 9/215 (4%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP-GTD 63 ++I D H ++R ++L ++++V D + D++I+D+ +P G Sbjct: 2 KIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGES 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +I + K+L L+ + Y +++GA G++ K + + AV+ + G Sbjct: 62 GLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVYQG 121 Query: 124 YTFFP--------SETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 T+ +E +N ++++ S++S +LS RE+ IL + G NK+IA+KL Sbjct: 122 ETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEKLF 181 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S KTV AHK++I KL L S EL++YA +L+ Sbjct: 182 VSVKTVEAHKTHIMTKLNLKSKPELVEYALKKKLL 216 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 262 bits (671), Expect = 5e-69, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 5/214 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K V++ D HP++R + L ++IV + D + T+ +R ++++MD+D+P Sbjct: 17 KTIKVLLADDHPVVRKGLGSCLNNLEHIEIVGEAVDGQETVSKVRELSPEIVLMDLDMPT 76 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G K I++ VKVL LS + Y + I++GA G+V K ++ A++ + Sbjct: 77 MSGLEATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELVRAIESVH 136 Query: 122 SGYTFFPSETL-----NYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 G FF + Y+ S L+NRE +L + G SNKE+A ++ + Sbjct: 137 GGGAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMASRMGV 196 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +TV H+ + KL +H++ L YA + +I Sbjct: 197 GVRTVETHRERVMNKLDIHNVAGLTKYAIAHGII 230 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 262 bits (671), Expect = 6e-69, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 104/211 (49%), Gaps = 4/211 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D H I+R I +LL++ +L +V + D+ R + +++MD+ +PG + Sbjct: 2 IKVMVVDDHSIVREGIRILLERFPDLSVVAEADNGRKASELAADLAPHVVLMDMTMPGLN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +R+ V+VL LS + + +A +AGA G++ K ++ AV+ + G Sbjct: 62 GIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQVACG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVT----VLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 + + + + + ++T L+ RE +L+ + G + K A +L ++ K Sbjct: 122 EMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNINVK 181 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H+ I KL + S+ EL YA LI Sbjct: 182 TVDTHRQQIMKKLKMRSVAELTKYAIREGLI 212 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 262 bits (671), Expect = 6e-69, Method: Composition-based stats. Identities = 53/211 (25%), Positives = 108/211 (51%), Gaps = 3/211 (1%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P V+I D H ++R + +L + +++V + + R +D D++++DI +P Sbjct: 10 PIRVLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVPDVVVLDITMPEE 69 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G R+++ +VL LS + Y ++ G +G++ K + ++ A++ + + Sbjct: 70 SGLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIRAVHA 129 Query: 123 GYTFFPSETLNYIKSNKCSTNSST---VTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 G TFF + + S + + + + +L+ RE +L + GL+NK IA +L +S + Sbjct: 130 GGTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELGISRR 189 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV AH+ ++ KL +HS+ L +A +I Sbjct: 190 TVEAHRESLMRKLQIHSVAGLTRFALETGII 220 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 262 bits (671), Expect = 6e-69, Method: Composition-based stats. Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 3/213 (1%) Query: 1 MKP-TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDL 59 M+ ++++D H +R +I +L+ S++ +V + ++ + D I+MDI+L Sbjct: 1 MRKMIKILVVDDHAFLRDAIRSILEDESDMNVVGEASSGDGVLEKVEACRPDCILMDINL 60 Query: 60 PGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 PG +G + +K+ +VL + Y A+QAGA+G++ K + + A++M Sbjct: 61 PGKNGIEATELVKKNYPNCRVLVFTMYEHDEYLMDALQAGADGYLLKDSSSEQVVAAIRM 120 Query: 120 ILSGYTFFPSETLNYIK--SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 + G + + + S L+ RE IL LV GLSNKEIA+ L +S Sbjct: 121 LYRGDSVIHPRMTKKLITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEALYIS 180 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +KTV H + I+ KL + S + + YA +L+ Sbjct: 181 DKTVKIHINKIFKKLNVKSRSQAVIYAVRNQLV 213 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 262 bits (671), Expect = 6e-69, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 114/208 (54%), Gaps = 2/208 (0%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P SV I+D HP+++ ++ L ++ IV TDD ++ D+I+MDI +P Sbjct: 8 PVSVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKAIELKPDVILMDISMPTM 67 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +G + I + KVL LS S + AIQAGA G++ K +I++A++ + + Sbjct: 68 NGIDATEIITEQLPETKVLILSMHSNPEFVKSAIQAGAVGYLLKDTTSEEIYYAIKAVAN 127 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G T F S + N +TN S L+ RE +L YL G ++KEIA L +S +TV Sbjct: 128 GKTHFSSSIAKLLIDNPVNTNES--EKLTTREQVVLSYLAKGKTSKEIAKILNISFRTVE 185 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 AH+ N+ KLG+HS+ +LI YA + +I Sbjct: 186 AHRRNMKTKLGIHSLAKLISYAVKHGII 213 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 262 bits (671), Expect = 6e-69, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 110/207 (53%), Gaps = 1/207 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D H ++R + L+ ++++V + D I D+I+MDI +PGTD Sbjct: 8 VRVLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARAEELRPDVILMDIKMPGTD 67 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G L+R++++ + +VL ++S +E A++AGA G+V K D + + A++ + +G Sbjct: 68 GIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRSVHAG 127 Query: 124 YTFFPSETL-NYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + E + + +SS L++RE +L ++ G SN+EIA L+LS KTV Sbjct: 128 HVLLQPEVAVALLTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSEKTVK 187 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYEL 209 H SNI KL + + +A + + Sbjct: 188 THVSNILMKLDVADRTQAALWAVRHGI 214 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 262 bits (670), Expect = 7e-69, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 103/207 (49%), Gaps = 2/207 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 ++++D H ++R + +LL+ ++ +V + +D R I T DLI++D+ L + G Sbjct: 4 ILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQATTLQPDLILLDLSLTNSSGL 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 ++ ++ ++L L+ + Y +A+ AGA+G+V K ++ A++ +L G Sbjct: 64 AAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVLRGEL 123 Query: 126 FFPSETLNYIKSN--KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + + + ++ LS RE +L + G + EIA +L LS KTV Sbjct: 124 YIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPKTVET 183 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 +++ KLGL S L+ +A + L+ Sbjct: 184 YRTRGMEKLGLRSRAALVQFALDHNLL 210 >UniRef50_C6XAP6 Two component transcriptional regulator, LuxR family n=3 Tax=cellular organisms RepID=C6XAP6_METSD Length = 214 Score = 262 bits (670), Expect = 8e-69, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 105/207 (50%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D H ++R + LL+++S +++V + + D+ +MD+ +PG Sbjct: 6 IRVLLVDDHTVVRSGLCRLLEQHSGIKVVAEAESGEQAYQVFGEYLPDVTVMDLSMPGMG 65 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++RI T +VL S +A + +++GA G+V+K +++ AV + G Sbjct: 66 GLEAMRRILARYRTARVLIFSMHENAAFAMQTLKSGARGYVAKTGSFDELVKAVVEVARG 125 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 ++ + I + ++ LS RE + R G + +EIA+ L +S KTV+ Sbjct: 126 KSYISTSIAQKIALQTVIGDGDLISQLSPREFEVFRLFAEGKNAEEIAEVLKISQKTVAN 185 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 + + + KLGL + VE++ +A + LI Sbjct: 186 YHTLVKQKLGLSNPVEMVRFAIKHGLI 212 >UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1H354_METFK Length = 213 Score = 261 bits (669), Expect = 9e-69, Method: Composition-based stats. Identities = 54/207 (26%), Positives = 103/207 (49%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++++D H ++R + LL++N ++++ + D + D+I+MD+ +PG Sbjct: 5 IRIMLVDDHEVVRSGLRRLLEQNDGVEVIAEADSGEQAYQFYGEHMPDVIVMDMSMPGMG 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G L+RI +V+ S +A +A+ AGA +V+K +D+ AV+ + G Sbjct: 65 GLEALRRIIARYPQARVIIFSMHENAAFASQALGAGARAYVAKSGAADDLVQAVREVAQG 124 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + I S + +LS RE + R L +G +EI+ L +S KTV+ Sbjct: 125 KGYLSPGIAQQIALQTLSGSDDPTRLLSAREFEVFRLLAAGKGVEEISTILKISQKTVAN 184 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 +++ + KLG+ S +EL+ A + +I Sbjct: 185 YQTLLKQKLGITSPIELVRLAIKHGVI 211 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 52/212 (24%), Positives = 102/212 (48%), Gaps = 2/212 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MK V+I+D H ++R + ++L ++++V + D I + D++++DI +P Sbjct: 1 MKKIKVLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGGIAMAQKMRPDVVLLDISMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G LK + Q ++V+ L+ + Y GA G+V K + ++ AV+ + Sbjct: 61 EMSGLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAVRAV 120 Query: 121 LSGYTFFPSETLNYIKSN--KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 SG + + + + LS++E +L + +G +N+EIA++L++S Sbjct: 121 YSGEMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLVISV 180 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 KTV +K I KL +L+ +A L+ Sbjct: 181 KTVETYKYRIMEKLNCKKRSDLVKFALDNGLL 212 >UniRef50_C7RMN3 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMN3_9PROT Length = 213 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 111/204 (54%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 + ++++D H ++R + +LL + ++++V + ++ I +R D+ ++DI LPG Sbjct: 4 RKLQILLVDDHAVVRGGLRLLLAQTDDMEVVSEAENAEQAISMIRQNEFDVALVDIGLPG 63 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G LK+IK + + VL LS +E YA RA++AGA+G+++K + + A++ + Sbjct: 64 KGGLDLLKQIKAERPRIAVLMLSMYAEEVYAVRALKAGASGYLTKNSPPGTLLAAIRKVA 123 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 G L + S LS+RE+ +LR L SG S +IA+ L LS KTV Sbjct: 124 GGGRHVSPALLEQLAVEVGQGRKSASDALSDREIEVLRRLASGESLTQIAEALHLSPKTV 183 Query: 182 SAHKSNIYGKLGLHSIVELIDYAK 205 + +++ I K GLHS EL YA Sbjct: 184 TTYRARIVEKTGLHSNAELTRYAL 207 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 60/220 (27%), Positives = 110/220 (50%), Gaps = 10/220 (4%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MK +++++D H I+R I+ L+ IV + + I+ ++ D++IMDI +P Sbjct: 1 MKKINILLVDDHTIVRDGIKATLKDQKNFHIVGEAANGLDGIEAVKQLKPDVVIMDITMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G I + KVL LS Y ++++AGA G++ K D+++ A+ + Sbjct: 61 EMSGIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITAV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVT----------VLSNREVTILRYLVSGLSNKEI 170 +G +F + + + S S T + L+ RE IL+ + G +N+EI Sbjct: 121 YNGDKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNREI 180 Query: 171 ADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 AD L +S +T+ H++NI KL + + VEL+ A +++ Sbjct: 181 ADGLGISIRTIETHRANIMKKLKVKNAVELVRIAIDEKIV 220 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 5/213 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 T +++ D H I+R + LL+ S+ +I + D R + + D++I+D+ +P Sbjct: 6 KTRILLADDHDIVRRGLRTLLELRSDWEICAEASDGRAAVQFAEDLAPDIVILDLSMPEL 65 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +G +RI ++L L+ + A+ AG G++ K + D+ +AV ++ Sbjct: 66 NGLEAARRIAAHCPRSRMLMLTMHETEQFVREALAAGVRGYILKTDAGRDLANAVDALIR 125 Query: 123 GYTFFPSETLNYIKSNK-----CSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 G TFF S I + + S + L+ RE IL+ L G N+++ L +S Sbjct: 126 GETFFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGKALNIS 185 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 KT H++ I KLG+ S+ +L+ YA LI Sbjct: 186 VKTAETHRARIMAKLGIDSVADLVRYAIRNGLI 218 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 6/215 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K +++ D H ++R ++VLL +L+++ + D ID + DL+++D+ +P Sbjct: 3 KKLRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMPK 62 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G ++ + + + +K+L L+ + Y +Q GA G+V K ++ A++ + Sbjct: 63 LNGVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTVA 122 Query: 122 SGYTFFPSETL------NYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 G F + + + S + LS RE+ +LR L G +N++IAD L Sbjct: 123 RGEMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADLLH 182 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S KTV +K+ + KL +H EL+ YA +I Sbjct: 183 VSVKTVETYKARVMEKLEMHKRAELVRYAMENGII 217 >UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z3_LEPCP Length = 235 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 115/205 (56%), Gaps = 1/205 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 ++I+D H I+R ++ +L+ +V + ++ +R +P+DL I+D+ +PG +G Sbjct: 15 ILIVDDHVIVREGLQRILEATGAGWVVAEASSGFQALEVMRHQPIDLAIVDLSMPGMNGL 74 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 +KRI+ V+VL LS +E YA RA +AGANG+V+K ++ +AV+ + +G Sbjct: 75 DLIKRIRTEFPRVRVLVLSMHAEEQYAMRAFKAGANGYVTKDGASAELVNAVRKVATGGA 134 Query: 126 FFPSETLNYIKSN-KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 + + + +T + LS+RE+ +LR +V+G +IA+ L LS KTVS H Sbjct: 135 YVTASLAERVVLQLNGATTAPGHAQLSDRELEVLRRIVAGERITDIAEALHLSVKTVSTH 194 Query: 185 KSNIYGKLGLHSIVELIDYAKLYEL 209 KS I KL L ++ LI Y + L Sbjct: 195 KSRIQEKLQLPTMAALIRYGMAHGL 219 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 63/213 (29%), Positives = 111/213 (52%), Gaps = 3/213 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M+ +I++D H + R + LL + +++V + + L D++ MD +P Sbjct: 1 MELCRIILVDDHSLFRSGMRGLLDRYDGIRVVGEASTGEEFLAMLPATEADVVFMDFAMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G +G ++ ++ +KV+ LS + Y R +QAGA GF+ K + +++ A++ + Sbjct: 61 GMNGAETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIETV 120 Query: 121 LSGYTFFPSETLNYIKSN---KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 +G T+F E L + S S + LS RE+ IL + GLSN+EIAD+L +S Sbjct: 121 AAGGTYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFIS 180 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +TV H++NI K G + L+ YA + L+ Sbjct: 181 KRTVDKHRANILEKTGCKNTASLVVYAVRHGLV 213 >UniRef50_C0N6H7 Response regulator receiver domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H7_9GAMM Length = 214 Score = 259 bits (664), Expect = 3e-68, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 110/207 (53%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D H ++R + LL++N+++ +V + + D+++MD+ +PG Sbjct: 5 IRVMLVDDHAVVRSGLCRLLEQNTDISVVGEAESGEQAYQTYPEISPDVLVMDMSMPGMG 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++RI S KV+ S YA +++ AGA G+V+K D+ AV+ + SG Sbjct: 65 GLEAVRRILNRWSGAKVIMFSMHENATYAIQSLTAGAMGYVAKSGHAEDLVKAVREVKSG 124 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 +F S+ + + + + + L++RE + R L G +IA +L + KTV+ Sbjct: 125 KSFLSSDMAHKVALQSLAGDDNPTQRLTSREFEVFRLLAEGKLVDDIASRLNIGQKTVAN 184 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 +++++ KLG+HS V+L+ A Y +I Sbjct: 185 YQTSLKQKLGIHSPVDLVRLAMKYGVI 211 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 99/209 (47%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 KP V++ D H ++R I L K E+++V + + R + D+++MD+ +P Sbjct: 3 KPIRVLLADDHALVRDGIRARLNKVPEIEVVGEATNGREAVKLAHELRPDVLLMDVSMPV 62 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G +++ + VL LS Y +QAGA G++ K ++ A+ + Sbjct: 63 MNGLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAISSVA 122 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 SG +F S + S L++RE +L + GL NKE+A L +S +TV Sbjct: 123 SGGYYFSSAVGPTLVGTATSAPIEDPYGLTDRERQVLTAIAKGLPNKEVAKSLGISVRTV 182 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +H+ N+ K+G + +L A+ L+ Sbjct: 183 ESHRLNLREKVGNKNAAQLYKVAQDLGLL 211 >UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XAQ5_9BACT Length = 229 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 4/210 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K T ++++D HP++R + ++ +L + + ++ ++ +++ DL++ DI LP Sbjct: 11 KATKILLVDDHPMMREGLRQIIGNEIDLAVCGEAENAFQALELVKSEKPDLVLADITLPD 70 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G LK ++ + VL +S E YA R ++AG G++ K I A++ +L Sbjct: 71 KNGLELLKDLQAQHPKLPVLVISMHDEALYAERVLRAGGRGYIMKHEGGKKIMQAIRHVL 130 Query: 122 SGYTFF----PSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 SG F + L + SS + L++RE + R + GLS KEIA + +S Sbjct: 131 SGQIFVSEKMSARILELFSGHGTQAASSPIENLTDREFEVFRLIGEGLSTKEIAANMHVS 190 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLY 207 KTV H+ NI KLGL + ELI Y + Sbjct: 191 AKTVEVHRMNIKTKLGLKTAAELIRYTVRW 220 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 258 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 55/214 (25%), Positives = 109/214 (50%), Gaps = 7/214 (3%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP-GT 62 V+++D H ++R + LL++ ++++V +T + ++++MD+ L G Sbjct: 3 IRVMLVDDHALVREGLRALLEREGDIEVVGETGSAAGVLALAEESRPEVVVMDLQLGAGR 62 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +G + + + + +KV+ LS + RA+++GA G+V K ++ A++++ Sbjct: 63 NGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLVAR 122 Query: 123 GYTFFPSETLNYIKSNKC------STNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 G + + + + L+ RE+ +LR GL+N EIA +L++ Sbjct: 123 GEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRLVI 182 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S KTV AH++NI KLGLH V+L+ YA ++ Sbjct: 183 SVKTVQAHRANIMQKLGLHDRVDLVKYAIKNGIL 216 >UniRef50_B2JSN3 Two component transcriptional regulator, LuxR family n=28 Tax=Proteobacteria RepID=B2JSN3_BURP8 Length = 210 Score = 258 bits (662), Expect = 7e-68, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 113/207 (54%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++I D H I+R ++ ++ +++ + + +D LRT VDL+++D+ +PG Sbjct: 2 IRILIADDHAIVRGGLKQIIATTNDIVVAAEAAQGSEVVDKLRTCAVDLLLLDMTMPGIS 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++R++ Q + VL LS E A RA++AGA G+++K +D + + A++ + G Sbjct: 62 GVDLIRRVRAEQPALPVLVLSIHDEAQVASRALRAGATGYLTKDSDPDVLLAAIRKLADG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 F + ++ + + VLS+RE +L+ L +G S EIAD LS KT+S Sbjct: 122 GRFIDPKLVDAMVFETHRGDMPPHEVLSDREFQVLQMLAAGKSINEIADICALSAKTIST 181 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 HK + KLGL + E+I YA + LI Sbjct: 182 HKMRLMQKLGLANNAEVIRYAIRHGLI 208 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 258 bits (662), Expect = 7e-68, Method: Composition-based stats. Identities = 58/210 (27%), Positives = 112/210 (53%), Gaps = 7/210 (3%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 P ++I+D +IR ++ +L++ +L++V ++ ++ ++ + D+++MDI +P Sbjct: 7 SPIRLLIVDDQSLIRQGLKAMLEQEPDLEVVGDAENGKVALELVAELQPDVVLMDIRMPE 66 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG T K I Q +KVL LS+ + Y A++AGA G++ K +++ A++ Sbjct: 67 MDGRTATKLIMQSFPNIKVLVLSTFDDDSYLTGAMRAGAKGYLLKDMPSSELADAIRFGH 126 Query: 122 SGYTFFPSETLNYI-------KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKL 174 SGYT F + + S ++ SS + ++ RE +L + G +N+EIA +L Sbjct: 127 SGYTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGATNREIAQQL 186 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 ++ TV H ++I +L L + +L YA Sbjct: 187 YITEGTVKTHVTSILSRLNLKNRSQLAIYA 216 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 258 bits (661), Expect = 9e-68, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 106/207 (51%), Gaps = 2/207 (0%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 +++ D H + R ++ LL ++ EL++V + + +PVDL+ MDI +PG DG Sbjct: 4 RILLADDHQMFRHALRALLARDPELEVVAEAASGEEVLAIADAQPVDLVCMDIAMPGMDG 63 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 +R+ ++V+ LS+ ++ + + AGA G+++K +++ A++ + G Sbjct: 64 IEATRRLLARHPALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRTVCEGR 123 Query: 125 TFFPSETLNYIKSNKCSTNS--STVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 ++ E + + + L+ RE +L+ + GL++ +I D+L ++ TV Sbjct: 124 SYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHIAASTVE 183 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYEL 209 H+ N+ KL LH++ EL YA + Sbjct: 184 VHRRNLMRKLDLHNVAELTRYAIHSGI 210 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 5/210 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V + D HPI+ I LL + E+++V + + + D+ ++D+ +PG + Sbjct: 5 IRVALADDHPIVLAGIRTLLNADPEIELVGEATSGSEALPMIHAADPDVAVVDVSMPGLN 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +R+ +VL L+ + Y ++AGA G++ K + D+ AV+ + +G Sbjct: 65 GLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAVRAVAAG 124 Query: 124 YTFFPSETLNYIKSNKCST-----NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 + ++ ++ + + LS RE +LR + G SNKEIA + LS Sbjct: 125 GIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARRFDLSV 184 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYE 208 K++ +K+ KLGL + E+I YA + Sbjct: 185 KSIETYKARAAEKLGLRTRAEIIRYAAAHG 214 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 6/214 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 V++ D HPI+R+ + LL+ ++ +V + ++ RT D+ ++DI +PG Sbjct: 4 NKIRVLLADDHPIVRVGLRALLEAEPDIAVVGEAGTADEAVELARTLQPDVAVLDISMPG 63 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G L+RI + + L L+ +E Y +QAG +G+V K + D+ A++++ Sbjct: 64 -NGLEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGGSGYVRKSSLHTDLVEAIRLVA 122 Query: 122 SGYTFFPSETLN-----YIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 G F Y+ + +LS RE +LR +G + +EIAD+L L Sbjct: 123 RGEVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQLFL 182 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S KTV ++ + KLG EL+ +A L+ Sbjct: 183 SPKTVETYRHRVMQKLGFSRRSELVRFALRIGLL 216 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 5/212 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 S+II + H ++R ++ LLQ L + + D ++ +D +L++MDI +P D Sbjct: 5 YSLIIAEDHTLLREGLKSLLQSVPHLIVTGEASDGQMAVDLCDRNQPELVLMDISMPRMD 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + IK+ V+VL L+ Y A+ AGA+G+V K ++ AV+ +L G Sbjct: 65 GVQATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVLGG 124 Query: 124 YTFFPSETLN-----YIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 + + Y+ + + SS+ L+ RE I + + G N+EIA+ L++S Sbjct: 125 KIYLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVVSV 184 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 KTV H+SN+ KLG+HS EL A +I Sbjct: 185 KTVEKHRSNLMQKLGVHSAAELRALALERGII 216 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 59/213 (27%), Positives = 109/213 (51%), Gaps = 4/213 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K SV+++D H + R ++ LL+ +++++ + D R D+I+MDI +PG Sbjct: 21 KAISVLLVDDHVLFRQALRHLLEAEPDIRVIGEAGDGRSAQQLAERFHPDVILMDISMPG 80 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG T + +K K++ L+ +E + RAI+AGA+ ++ K ++ + + A++ + Sbjct: 81 VDGVTATRDLKAGIPNTKIIILTMFAEDGHVIRAIRAGADAYLLKNSESSKVIDAIRAVA 140 Query: 122 SGYTFFPSETLNYIKSNKCS----TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 G + + + + TV L+ RE+ +LR + SG+SNKEIA +L L+ Sbjct: 141 RGESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEIAAELSLA 200 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV S ++ KL + + YA + LI Sbjct: 201 ESTVKNRLSLLFEKLDVKDRTQAAIYALSHGLI 233 >UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92 Tax=Burkholderiales RepID=Q3JFS6_BURP1 Length = 282 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 60/208 (28%), Positives = 113/208 (54%), Gaps = 1/208 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I D H ++R + +LQ S ++ + D TI +R+ P ++++D+ +PG + Sbjct: 69 IKVLIADDHALVRDGLRHILQNASGYEVAGEAFDSATTIALVRSTPAQVLVLDLSMPGRN 128 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +K+IK+ + +++L L+ +E YA RA +AGA+G+++K + +++ AV + SG Sbjct: 129 GVELIKQIKEEKPALRILVLTMHAEQQYAVRAFRAGASGYLTKESASSELVGAVTKVASG 188 Query: 124 YTFFPSETLNYIKSNKCSTNSS-TVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + + + LS+RE + R + SG + +IAD+L +S KTVS Sbjct: 189 GVYVSLAMAERFAQSLNEPAETLPHHRLSDREFDVFRRIASGQTLTQIADELCVSAKTVS 248 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 +K+ I K+ + L+ YA ++LI Sbjct: 249 TYKTRILEKMQMPHEAALVRYALRHKLI 276 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 13/221 (5%) Query: 1 MKPTS--VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDID 58 MKPT+ + ++D H I+R ++++L +I ++ D +D + DL+I DI Sbjct: 1 MKPTNTKIFLVDDHAILREGLKMILSGQ--FEICGESGDAEKALDQIGKLNPDLVITDIS 58 Query: 59 LPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQ 118 +PG G +K +++ ++ + LS Y + ++ G NG+V K + ND+ A++ Sbjct: 59 MPGLSGIDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAIE 118 Query: 119 MILSGYTFFPSETLNYIKS---------NKCSTNSSTVTVLSNREVTILRYLVSGLSNKE 169 + G T+ + S + +VLS+RE IL+ + G SN+ Sbjct: 119 AVHKGETYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNES 178 Query: 170 IADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 I L +S TV H++NI KL LH + +L+ YA LI Sbjct: 179 IGKILGISPATVKVHRANIMKKLNLHKVADLVMYAIRAGLI 219 >UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR family n=30 Tax=root RepID=A1WBJ7_ACISJ Length = 239 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 1/208 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 + I+D H I+R + L ++ +L++V + + R ID +R +D+++MD+ +PG Sbjct: 31 IKIGIVDDHAIVRAGLRQFLSEHVDLRVVGEASNGREAIDLVRVHEIDVLVMDLSMPGQS 90 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G L ++ + +L LS E YA I+ GA+G+++K + +I A++ I G Sbjct: 91 GLDALAMLRAKAPDMGILILSGYPEEHYAINLIRQGASGYLNKECEPKEIVEAIRTIALG 150 Query: 124 YTFFPSETLNYIKSNKCST-NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + + + ++ LS RE + L G + +IA L LS KTVS Sbjct: 151 RRYLTPSVADLLAQQLNRKDDAPPHEQLSEREFQVFLKLAKGETAGDIAKSLSLSVKTVS 210 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 +++ + K+GL S +L YA +LI Sbjct: 211 TYRTRLMEKMGLSSNSDLTYYALKNKLI 238 >UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746AEC Length = 222 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 4/210 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 V+++D H ++ +L +L++ + L DL++ D+ L G Sbjct: 8 SKARVLLVDDHRMVLEGYRFMLNAQPDLEVCATAVSAAEALGLLEQVRPDLVVTDLTLGG 67 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G +K + + K+L S E +A R +QAGA G+V K D AV+ +L Sbjct: 68 RSGLDLIKDVMALFPETKILVCSMHDEMLWANRTLQAGARGYVMKDADGPTFLTAVRTVL 127 Query: 122 SGYTFFPSETLNYIK----SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 +G + S + +K +SS + LS+RE + R G + KEIA +L LS Sbjct: 128 AGQRYMSSRLAASVLESFGQSKPRGSSSPIEKLSDREFEVFRLFGEGKTAKEIAAQLNLS 187 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLY 207 KTVS H+ +I KLG + E+I A + Sbjct: 188 PKTVSVHRDHIKEKLGFSTSAEMIRQAVRH 217 >UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR2_THEYD Length = 213 Score = 255 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 1/210 (0%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K V+I+D H + R ++ +L ++ + ID L D++ +DI + Sbjct: 3 KRLKVLIVDDHTLFRKGLKEILLDTPYIKECKEAKSGYEAIDILSKESFDIVFLDIAMSD 62 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G LK+IK + K+L LS E YA R+++ GA+G+++K D ++ AV I+ Sbjct: 63 INGIETLKKIKILYPETKILMLSMYPEEQYAIRSLKCGASGYLTKSADPEELLKAVDKII 122 Query: 122 SGYTFFPSETLNYIKS-NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 G + P + S + LS RE + + G S EI+ +L +S KT Sbjct: 123 KGGKYLPHTFSEKLLHYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKELSISIKT 182 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 VS +++ I KLGL + E+I+YA + LI Sbjct: 183 VSTYRARILEKLGLENNAEIINYAIKHGLI 212 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 255 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 5/215 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M V++ D H ++R + LL ++QIV + R + + D+I+MDI +P Sbjct: 28 MPNIRVLLADDHTVVRQGLRALLSGEKDIQIVGEAGTGREAVQMAQKLTPDVILMDIAMP 87 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 +G ++I ++ + KVL LSS E Y + +AGA+G++ K ND+ AV+ Sbjct: 88 LMNGLEATRKIAEVAPSAKVLVLSSYGEDDYVQKLTEAGASGYLIKHAAANDLVAAVRET 147 Query: 121 LSGYTFFPSETLNYIKSNKCST-----NSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 G FF ++ + + L+ RE+ L ++V+G NK IA + Sbjct: 148 HKGNAFFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGKPNKVIACDMG 207 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S KTV H+ + KL +H + L YA +I Sbjct: 208 ISIKTVEKHRQQVMNKLNIHEVASLTRYAIAKGMI 242 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 255 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 6/214 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M P ++I D H I+R + VLL++ L++ ++ R + D++IMDI +P Sbjct: 1 MPP-RILIADDHAIVREGLRVLLER-KGLEVPWMAENGRQAVCLAVKFKPDIVIMDITMP 58 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 +G ++I Q +V+ LS ++ Y R AGA +V K + ++F A+Q + Sbjct: 59 NMNGSIATEKIMQALPRTRVIALSMHADRRYIDRMFNAGAIAYVLKDSAFAELFDAIQAV 118 Query: 121 LSGYTFFPSETLNYIK----SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 G + + S + +S RE +L+ + G+ ++IA++L + Sbjct: 119 GRGKYYISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAERLFV 178 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S KTV AH+ NI KL + S+ L +A L+ Sbjct: 179 SIKTVEAHRRNIMNKLMISSVAGLTRFAIQEGLV 212 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 255 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 105/209 (50%), Gaps = 2/209 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 + I D H ++R + +L ++ +++V + + ++ ++ + D++++DI +P D Sbjct: 2 IKIAIADDHALLREGMRRMLSQSELIEVVGEASNGAEAVEVVKEKAPDVLLLDITMPVKD 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G I + K+L LS ++ YA R ++AGANGF+SK ++ A+ + G Sbjct: 62 GIEATADILALNVNTKILILSMHADEQYALRTLRAGANGFISKGARLEELLKAITDVHEG 121 Query: 124 YTFFPSETLNYIKSN--KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + P + + V LS RE ++ +L G++N+EIA L +S KTV Sbjct: 122 QRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQISVKTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 H+S++ KL L + ++ +A + I Sbjct: 182 DTHRSHVLKKLELRNNSDITRFAIQHGYI 210 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 106/209 (50%), Gaps = 3/209 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +++ D H I+R ++ LL + ++++V + + + D+ +MD+ +P D Sbjct: 3 IKILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEALSIAGEIRPDVTVMDVMMPQMD 62 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +RI + S+ +V+ LS ++ + ++ GA GF+ K ++ AV+ ++ G Sbjct: 63 GIEATRRIVEDGSS-RVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRKVMDG 121 Query: 124 YTFFPSETLNYIKSNKCST--NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + + + S+ + + L+ RE IL L G +N+E+A++L LS KTV Sbjct: 122 EIYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLSIKTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 H+ +I KL L ++ +L+ YA +I Sbjct: 182 GTHRQHIMNKLKLKNLADLVKYAIRNGMI 210 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 113/214 (52%), Gaps = 4/214 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MK S+II D H +IR I+ LLQ E ++V + D I ++ T +++++DI +P Sbjct: 2 MKKISIIIADDHTLIRDGIKSLLQSVDEFEVVGEATDGDELIQFIDTLDPEIVVLDITMP 61 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G + +K+ + VK + LS Y +++Q+GA ++ K D +I AV+ + Sbjct: 62 KKSGIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAVKAV 121 Query: 121 LSGYTFFPSE----TLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 +G +F + LN + + + S L+ RE+ +L+ + GLS K IADKL + Sbjct: 122 SAGQKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIADKLFI 181 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S +TV H+ N+ KL +H+ ELI A +I Sbjct: 182 SVRTVETHRINLMKKLDVHNSAELIKKAMDLNII 215 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 52/212 (24%), Positives = 111/212 (52%), Gaps = 5/212 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P ++++D H ++R + ++L++ SE +V + ++ + + D+++MDI LPG Sbjct: 2 PFDIVLVDDHKLVRDGVRMILERGSEFLVVGEAENGADAVQLCKKSSPDIVLMDIGLPGM 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +G + + +VKV+ LS + AI++GA FV K N++ A++ + Sbjct: 62 NGIEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVAR 121 Query: 123 GYTFFPSETLNYI-----KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 G ++ S+ + + + + + + S + LS RE+ +LR + G ++K+IA L L Sbjct: 122 GGSYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLG 181 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 +TV +++ + KLG++++ L A + Sbjct: 182 LQTVRSYRKTMMKKLGVNNVAGLTQLALAAGI 213 >UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYF0_9SPHI Length = 218 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 7/215 (3%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P V I D H + R + +L+ + +++V D+ + ID + +P D+I+MD+ +P Sbjct: 2 PVKVAIADDHVLFRKGLVTILELDDNIEVVYGADNGKELIDKVDAQPPDVILMDLKMPVM 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG K IK VKVL LS E + ++ GANG++ K D +++ HA+ +++ Sbjct: 62 DGMEATKIIKAKYPEVKVLVLSMYDEEKFIIHCLELGANGYLLKNTDPDELVHAIGTVMA 121 Query: 123 GYTFFPSET-------LNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 +F + LN K K L+ RE +L + L+ E+A+KL Sbjct: 122 KDFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMAEKLF 181 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +SN+TV H+ N+ K G + L+ +A EL+ Sbjct: 182 ISNRTVEGHRKNLLEKTGAKNTAGLVVFALKNELV 216 >UniRef50_A4TJY3 Two-component response regulator n=27 Tax=Yersinia RepID=A4TJY3_YERPP Length = 210 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 101/211 (47%), Positives = 146/211 (69%), Gaps = 2/211 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M SV+I+D HP IR++I LL ++ E + ++ D ++ L+ PVDL+I+DI+LP Sbjct: 1 MTK-SVMIVDDHPAIRVAIHALLSQSKEFSTISESVDGSEALEKLKNNPVDLVIIDIELP 59 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 DGF+ LK+++Q T K LFLS+K+E +A RA+QAGANGF+SK D ++I A Q + Sbjct: 60 NFDGFSLLKKLQQRGFTGKSLFLSAKNEQVFAVRALQAGANGFISKNKDISEILFAAQNV 119 Query: 121 LSGYTFFPSETLNYIKSNKCSTNS-STVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 L GY+FFPSETL + S + + +LS RE+ +LRYLV+GLSNK+IAD++ +SNK Sbjct: 120 LRGYSFFPSETLTQLAGQPSSHDPVNRARLLSEREINVLRYLVNGLSNKQIADEMFISNK 179 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TVS +K+ I KLGL S++EL DYA + L+ Sbjct: 180 TVSTYKTRILTKLGLSSVIELADYAHTHNLV 210 >UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10 Tax=Proteobacteria RepID=Q1GZT3_METFK Length = 215 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 103/210 (49%), Gaps = 1/210 (0%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 V+I D H I+R ++ +L + ++++V + I T+ +D++++DI LP Sbjct: 5 STIKVVIADDHAILREGLKQILAETEDIEVVADAKNAAEAIKLAGTKGLDVVVLDISLPD 64 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G IK+ V VL LS E YA RA++AGA G++SK + + + A++ + Sbjct: 65 RSGIEACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAVGYLSKQSASDQLVTAIRTVA 124 Query: 122 SGYTFFPSETLNYIKSNKCST-NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 G + +E + LSNRE L + SGLS EIA+ L LS KT Sbjct: 125 KGKKYISAEVALALADQVSGGLEKPIHDTLSNREFQTLTMIASGLSVSEIAENLSLSVKT 184 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 VS +++ + KL L EL YA LI Sbjct: 185 VSMYRARLLEKLNLRHNAELTHYAIKNNLI 214 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 5/212 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++I D H +IR + +L + +V + + + +DY PVD+++MDI++P + Sbjct: 5 IKLLIADDHILIREGLRKILSIEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDINMPIMN 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++IK++ + ++ L+ + Y I+ G +G+V K + + + + G Sbjct: 65 GIEACRQIKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTILGVAQG 124 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTV-----LSNREVTILRYLVSGLSNKEIADKLLLSN 178 +F P + + +S + L+ RE+ +L+ + G SNK IA+ L +S Sbjct: 125 ESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANALYISE 184 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 KTV H +NI+ K+G+ + YA +L+ Sbjct: 185 KTVKNHLTNIFQKIGVADRTQAALYAIKEKLV 216 >UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM Length = 206 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 2/207 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +I+ D H I R + LL + EL+IV + + +R D+ ++DI +PG + Sbjct: 2 IRIIMADDHTIFRQGLAHLLSAHQELEIVGEAGRGDDALQLIRDLNPDVALLDISMPGLN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +KR+ + + ++L L+ + A +A QAGA G+V K N +++ A+ + +G Sbjct: 62 GLDVVKRVVEEKRPTRLLLLTMHDDPTLAIKAEQAGALGYVVKDNAFSELLDAILAVAAG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 F + N+ LS RE ++R + G +NKEIA L +S KTV Sbjct: 122 KRFVSEVVAEKV--NELERLDDLPVQLSPREKEVVRLVADGQTNKEIARSLGISPKTVDT 179 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H++ + KL LH+ +++ YA L+ Sbjct: 180 HRTRLMRKLNLHTTADVVRYAMRMGLV 206 >UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobacteria RepID=Q5ZS73_LEGPH Length = 225 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 56/208 (26%), Positives = 118/208 (56%), Gaps = 1/208 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I+D H ++RM I LL+ S++ +V + + Y++T D++++D+ +PG D Sbjct: 8 IKVLIVDDHALVRMGIRRLLEDMSDVDVVADAESGEQALAYVKTHSPDVVLLDMKMPGID 67 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G+ +R+K+ +KV+ +++ R +Q GA G+++K + ++ A++ + G Sbjct: 68 GWEVTRRLKKTNPNIKVIAVTAICSDPLPTRVLQLGAMGYLTKESGAEEMAAAIRKVAKG 127 Query: 124 YTFFPSETLNYIKSNKC-STNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + +E + N + S +LS RE+ ++ + SG++ ++IAD+L LS+KT++ Sbjct: 128 EKYLSAEIAQKMAINSLQESQDSPFDLLSEREMQVMLMITSGMNVQDIADRLFLSSKTIN 187 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 ++ ++ KLG+ + VEL A + +I Sbjct: 188 GYRYRMFEKLGIKNDVELTYLAMKHRII 215 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 5/213 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYL----RTRPVDLIIMD 56 M V+I+D H ++RM ++ L ++ +++ + D R ++ L R D+I+MD Sbjct: 10 MSKIKVMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDIILMD 69 Query: 57 IDLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHA 116 + +PG +G K ++ +K++ L+S E +A++AGA +V K ++ +A Sbjct: 70 LMMPGMNGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEELIYA 129 Query: 117 VQMILSGYTFFPSETLNYI-KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 +Q G E + + + T + ++ RE +L + G SNK+IA++L Sbjct: 130 LQGAYRGMPVMTGEVAQALTRGLRQRTVQGDDSGMTEREKEVLLLIAEGKSNKDIAEELH 189 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYE 208 +S KTV H SN+ K L +L YA Sbjct: 190 ISIKTVKTHVSNLLMKCELEDRTQLAIYAHRQG 222 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 7/217 (3%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M V+I+D HP+ R ++ L+++++ Q V + + + DL+ MD+ LP Sbjct: 1 MGKKRVLIVDDHPLFREGVKSLVERSANYQAVGEAGCGAEALALAQELKPDLVTMDVSLP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G ++ I + ++L LS + Y A +AGA G+V K + + Sbjct: 61 DMSGIEVVRGILDLAPETRILMLSMYPKFDYVAEAFKAGAKGYVVKETTTARLIQGFDAL 120 Query: 121 LSGYTFFPSETLNYI-------KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADK 173 G F + + + + +L+ RE +LR + G S ++IA Sbjct: 121 CRGEFFVDGQVSQDLVAKLAQGAARDQALQDEKYGLLTPREQQVLRLVAEGSSTRQIAAA 180 Query: 174 LLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 + LS KTV H++N+ KL +HS +EL+ YA LI Sbjct: 181 IELSPKTVENHRTNLMKKLDVHSKMELVKYAARLGLI 217 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 60/211 (28%), Positives = 109/211 (51%), Gaps = 2/211 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M T V+I+D H ++R + ++L + +++V + + D+++MD+ +P Sbjct: 1 MAHTRVVIVDDHALVRQGLRLILHGVAGIEVVGECSCGEDALKAAVKDRPDVMLMDVHMP 60 Query: 61 -GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 G DG T + ++QI V+V+ L+ + + + + AG +G V K +D ++I A+Q Sbjct: 61 QGLDGITTARHLRQIAPQVRVIMLTMFDDRVHVEKMLDAGVSGIVFKHDDSSEIVAAIQH 120 Query: 120 ILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 G+ + + + + S T LS RE +L L G +N+E+AD L +S K Sbjct: 121 GQPGHPYLSRR-WGQRANAETVSPSRTAERLSPRETEVLVLLAQGYTNREVADALHISVK 179 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H+ +I ++GLHS L+ YA L+ Sbjct: 180 TVETHRQHIMRRIGLHSRAALVRYAYQNGLV 210 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 48/212 (22%), Positives = 104/212 (49%), Gaps = 5/212 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 S+++ D H I+R ++ LL+ ++ ++V + D ++ + + +++ D+ + G Sbjct: 2 ISIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEAVNLVESLQPGVLVTDLMMGGMS 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++ + V+ LS Y A++AGA +V K + ++ +V+ + G Sbjct: 62 GIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREAVQG 121 Query: 124 YTFFPSETLN-----YIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 + + S Y++ + +T+ L+ RE +L + G + EIA++L +S Sbjct: 122 HRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLFISP 181 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +TV H++N+ KL L + +L+ YA +I Sbjct: 182 RTVEVHRANMMRKLDLRNQTQLLRYALQRGII 213 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 2/209 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++++D HP++R + +L+ +L +V + D + R D+++MD+ +PGTD Sbjct: 2 IRILVVDDHPVVREGLVAILEAQEDLTVVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGTD 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++ IK+I +V+ L++ +A+QAGA+G++ K + DIF AV+++ G Sbjct: 62 GVQAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVVYRG 121 Query: 124 YTFFPSETLNYIKSNKCS--TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + + + L+ RE+ +L + GL NKEIA +L ++ +TV Sbjct: 122 GSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITERTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 H + IY KL + E + A L+ Sbjct: 182 KFHANAIYRKLDVSGRTEAVSKAIQRGLV 210 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 57/211 (27%), Positives = 111/211 (52%), Gaps = 4/211 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 T V+I+D H + R + +L +++V + D+ +D++ PVDL++MD+ +P D Sbjct: 14 TRVLIVDDHELARAGLAAVLACEPGIEVVGEADNGAAALDFVARHPVDLVMMDLQMPVID 73 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +RIK + + ++ ++ +++ A++AG G++ K + +I AV+ +L G Sbjct: 74 GIEATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVRQVLRG 133 Query: 124 YTFFPSE----TLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 F + TL + + +++ + L+ RE +LR L+ G +N+EIA +L++S Sbjct: 134 EAFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIARELIISPG 193 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H +I KLG+ + A L+ Sbjct: 194 TVKVHVEHIIAKLGVSDRTQAAVRALELGLV 224 >UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K960_AZOSB Length = 209 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 1/207 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I D H ++R + L E IV + + + ++ +RT D++++DI LP + Sbjct: 2 VKVLIADDHAVVRGGLRQFLSSTEEFDIVAEAANGQTALELVRTSGCDVVLLDITLPDLN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G LKRIK+ + + VL S SE +A A+ AGA+G+++K + I A+ +++G Sbjct: 62 GLEVLKRIKRSKPDLPVLIFSMFSEDEFALPALNAGASGYLNKDSPPAQILAALHTVVAG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSS-TVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + + + S LS RE+ +L L G+ I ++ LS KT+S Sbjct: 122 ARYVSPSLAERLLAGTMSPGKRLPHENLSPREMAVLLLLSKGVPLTRIGEQFHLSVKTIS 181 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYEL 209 +++ I KL L S E+ Y ++L Sbjct: 182 TYRARILEKLDLASNAEITRYVLQHKL 208 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 6/210 (2%) Query: 7 IIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFT 66 ++ D H ++R + L++ + + + + R + + D++++D+ +P +G Sbjct: 1 MVADDHEVVRRGVRALVESHPGWTVCGEASNGREAVRLAQELRPDVVVLDVTMPELNGLE 60 Query: 67 FLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTF 126 + I+ +++ L+ G+A+ AGA G+V K + + A+ + + Sbjct: 61 ATREIRASVPDTEIILLTVHDSDQLLGQALDAGARGYVLKEDAARHLVDAIDALSKHAPY 120 Query: 127 FPSETLNY------IKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 PS + N + VT L+ RE +LR L G SN+E+A +L +S KT Sbjct: 121 VPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLSISAKT 180 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V H++N+ KLG SIV+L+ YA ++ Sbjct: 181 VETHRANVMRKLGASSIVDLVHYAIRNGIV 210 >UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobacteria RepID=GACA_PSEAE Length = 214 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 105/209 (50%), Gaps = 2/209 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D H ++R I +L LQ+V + D + R D+++MD+ +PG Sbjct: 2 IKVLVVDDHDLVRTGITRMLADIEGLQVVGQADCGEDCLKLARELKPDVVLMDVKMPGIG 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +++ + Q +KV+ ++ E + R +QAGA G+++K ++ A++ + +G Sbjct: 62 GLEATRKLLRSQPDIKVVVVTVCEEDPFPTRLMQAGAAGYMTKGAGLEEMVQAIRQVFAG 121 Query: 124 YTFFPSETLNYIK--SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + + + S + + S LS RE+ I + + + I+DKL LS KTV Sbjct: 122 QRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALMIANCHKVQSISDKLCLSPKTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 + ++ I+ KL + S VEL A + ++ Sbjct: 182 NTYRYRIFEKLSITSDVELALLAVRHGMV 210 >UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9H4_DESAH Length = 217 Score = 253 bits (648), Expect = 2e-66, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 109/212 (51%), Gaps = 4/212 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MK V+I D H ++R I +++ + +V + D ++ L T+P DL+I+DI +P Sbjct: 1 MKACRVVIADDHAMLRRGICQVIETQEGVSVVGEVGDGIELLNLLSTQPADLVILDISMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G K+I+ +K+LFLS Y A AGANG++ K + +I A+ I Sbjct: 61 KMSGIEAAKKIRATYPGIKILFLSMHKRNEYLYHAFSAGANGYLLKEDTDTEILTAMDTI 120 Query: 121 LSGYTFFPS----ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 L G F S + + + + +S LS RE +L L G SNK+IAD L + Sbjct: 121 LEGKAFLSSIFTKDMPDILTDMVKNGSSFPGGTLSPREEEVLTLLAEGKSNKKIADILCI 180 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYE 208 S +TV H+++I +L L ++ +LI YA + Sbjct: 181 STRTVEHHRASIMKRLDLRTLADLIKYAIRHG 212 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 253 bits (648), Expect = 2e-66, Method: Composition-based stats. Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 3/212 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 P ++I+D HPI+R + + ++V + D + D+++MD+ +P Sbjct: 10 SPLRLLIVDDHPIVRDGLRGVFDGEDGFEVVGEASDGAQALVRAAESGPDVVLMDLRMPT 69 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G ++R++ Q V+VL L++ AI+AGA G++ K + D+ AV+ Sbjct: 70 MGGVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGATGYLLKDAPREDLIRAVRAAA 129 Query: 122 SGYTFFPSETLNYI---KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 +G + + + L+ RE+ +LR + SG +N+E A KL +S Sbjct: 130 AGQPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLFISE 189 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H + Y K G+ + A L+ Sbjct: 190 ATVKTHLLHAYAKFGVRDRAAAVAEAYKRGLL 221 >UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q98DH9_RHILO Length = 215 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 105/207 (50%), Gaps = 1/207 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++I D HPI+R I +L++ +E + + D+ + R ++I+D LP + Sbjct: 6 IKIVIADDHPIVRSGIRAVLEQRAEWWVCGEADNGETAVRLAREHAAKIVILDYSLPVLN 65 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + I++ +VL + + ++AGA G++ K D +++ AV ++ G Sbjct: 66 GLEATRIIRRTMPETEVLIYTMHEDESLIRETLRAGARGYLLKIEDDSELVAAVAALIRG 125 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTV-LSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 T+F + + S + L+NRE ++R++ G SNK IA +L +S KTV Sbjct: 126 QTYFSPRVSECVLQDFLDGQSDVTSRNLTNREREVVRFVSEGESNKRIAARLGVSVKTVD 185 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYEL 209 +H++ KLGL + V+L+ YA +L Sbjct: 186 SHRTTAMRKLGLRNAVDLVRYAIRNKL 212 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 6/207 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++++D H I+R + LL +++ + D I R D+ IMD+ LP + Sbjct: 10 IRILVVDDHHIVRQGLVALLNTLPGFEVIAEAGDGVEAIALHREHQPDITIMDLRLPRMN 69 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + RI++ +++ L++ RA+QAGA G++ K D +D+ A++ + +G Sbjct: 70 GVEAITRIREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDLTAAIRSVHAG 129 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + P+ + + L+ RE+ +LR +V G SN+EIA L +S TV Sbjct: 130 KSRIPTVVAERLAERMSGSE------LTARELDVLRLIVQGRSNREIAADLHISEATVKT 183 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H +N+ KLG+ + A L+ Sbjct: 184 HINNLLSKLGVSDRTQAATTALQRGLV 210 >UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, putative n=2 Tax=Shewanella RepID=B8CN77_SHEPW Length = 206 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 113/206 (54%), Gaps = 3/206 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D HP+ R + L +S+++++ + D+ + ++ L PVDL++ DI++P D Sbjct: 2 IRVLLVDDHPLFREGLRYRLSLDSDIEVLAEADNGQQALEILNKMPVDLVLTDINMPQMD 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G L+ IK+ + + KV+ LS Y ++ GA+G++ K ++ A++ + +G Sbjct: 62 GMYLLELIKEQELSCKVVMLSMHDNKEYIMATMRYGADGYILKDVPGKELIEAIKKVAAG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 +F ++ +N + S + V + RE +LR + G++NK IA ++ +S +TV Sbjct: 122 KRYFSADVINTLSQELASGKQALV---TQREQLVLRLISLGMNNKRIAQEMDVSVRTVET 178 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYEL 209 HK NI KL + S L+ YA + L Sbjct: 179 HKRNIKQKLMIDSTAGLVRYAIDHGL 204 >UniRef50_Q13QW9 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=Q13QW9_BURXL Length = 220 Score = 252 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 98/206 (47%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 SV+++D H ++R LL+ N+++ + + D D+++MD+ LPG Sbjct: 6 ISVLLVDDHAVVREGYRRLLELNADVHVCGEAADAAQAYQRFCALRPDVVVMDVSLPGAS 65 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++R+ + +VL S E + RA+ AGA G+V+K + + + AV+ I Sbjct: 66 GIEAMRRMLAREPDARVLIFSVHEEAIFVRRALDAGALGYVTKASAPDVLVEAVRTIARR 125 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + + + + LS RE +LR LV G + IA+KL LS KTV+ Sbjct: 126 AGYLSPDISQALALRNAFSEGPPGRQLSAREFEVLRLLVQGYTLPSIAEKLGLSQKTVAN 185 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYEL 209 H+S I K G + V+L A L Sbjct: 186 HQSVIRQKFGADNGVQLAQMASRLGL 211 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 4/209 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I D HP+ R + LL+ +++V + + + D+++MD+ +PG + Sbjct: 10 IRVLITDDHPVFRQGLRGLLEAL-GVEVVGEAESGPQAVQLAAELQPDVVVMDLHMPGGN 68 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + I + + VL L+ + A++AGA G++ K + +I AV+ + +G Sbjct: 69 GIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAVRAVAAG 128 Query: 124 YTFFPSETLNYIK---SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 + E + ++ + L+ RE +L+ + G SN EIA L LS KT Sbjct: 129 EAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLFLSPKT 188 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 V H SNI+ KL + + I A+ L Sbjct: 189 VRNHVSNIFMKLHVADRAQAIVLAREAGL 217 >UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC-HTH domains) n=7 Tax=Bacteria RepID=B3DW63_METI4 Length = 243 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 4/208 (1%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 V+I+D H I+R + L+ L + + + + D++++DI LPG G Sbjct: 20 KVLIVDDHAILREGLIQLINSTPGLSVCGAAKNAHEGFELIEKTMPDVVLVDISLPGKSG 79 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 +K I + +L LS E YA R ++AGA G++ K + A+Q +L+G Sbjct: 80 LELIKDIHAAYPDIALLVLSMHEESLYAERVLRAGARGYLMKNEGGQKLIAAIQKVLAGG 139 Query: 125 TFFPSETLNYIKSNKCSTNS----STVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 N I S + LS+RE + + + G +++IA++L LS KT Sbjct: 140 ISVSERVANRILQGVSGKRKALSISPIEALSDREFEVFQLIGKGYGSRQIAEQLSLSVKT 199 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYE 208 V A++++I KL L S +L+ YA ++ Sbjct: 200 VEAYRASIKQKLYLKSGPQLVHYAISWQ 227 >UniRef50_Q15T22 Two component transcriptional regulator, LuxR family n=4 Tax=Alteromonadales RepID=Q15T22_PSEA6 Length = 214 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 1/208 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++++D H ++R I +L+ +V + + + R DL++MD+ +PG Sbjct: 2 IKILLVDDHELVRTGIRRILEDVQGFVVVGEATTGEEAVKFCRKNAPDLVLMDMSMPGIG 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G K+I + +V+ LS E + ++ GA G+++K +D ++ A++ + +G Sbjct: 62 GLEATKQILRFSENTRVIVLSVHKENPIPAKVMRMGAFGYLTKDSDPKEMELAIRKVAAG 121 Query: 124 YTFFPSETLNYIKSNKCS-TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + + I ++ + LS RE+ I L G +IA L +S KTV+ Sbjct: 122 QKYVSPDIAQQIAIGALDFSDGNPFESLSERELEITLMLTKGSKVPDIAKFLNISAKTVN 181 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 H+ ++ KL + + VEL A ++LI Sbjct: 182 THRYRMFEKLNVSTDVELTHLALRHKLI 209 >UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z2_9FIRM Length = 209 Score = 252 bits (645), Expect = 7e-66, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 106/208 (50%), Gaps = 4/208 (1%) Query: 7 IIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFT 66 +I+D H +IR I++LL+ S + + + + L +P+DL+IMDI +PG G Sbjct: 1 MIVDDHLLIRAGIKLLLKNTSAYTVTAEAESGEEALRLLAQQPIDLVIMDISMPGMGGLA 60 Query: 67 FLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTF 126 ++ I+ VK+L LS + Y +A+Q GA G++ K + N++F A+Q++ G + Sbjct: 61 CIREIRAHYPAVKILVLSMHEDEEYIYKAMQYGAMGYLPKTSADNELFDALQVLSQGRRY 120 Query: 127 FPS----ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 ++ + +VL+ RE + L+ G + EIA++L LS KTV Sbjct: 121 LSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHLSVKTVD 180 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 HK +IY KL EL+ A L+ Sbjct: 181 THKKHIYEKLHCSRRSELVTLALRNGLL 208 >UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrhizobium RepID=Q89IF1_BRAJA Length = 217 Score = 252 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 53/206 (25%), Positives = 99/206 (48%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 SV+++D HPI+R +L+ +L +V + D+ + D++++DI +PG Sbjct: 9 ISVLLVDDHPIVRQGYRRVLESQGDLHVVAEADNAADAYGAFKAHDPDVVVLDISMPGAS 68 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++ I+ ++L + +E A AGA+GFV+K ++ + + +A++ + G Sbjct: 69 GLEAIRNIRARSPRARILVFTMHNEAVLVKAAFSAGASGFVTKSSEPSAVVNAIRSVARG 128 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + + + + S S + L RE+ ILR G + ++IA L LS KTV Sbjct: 129 ERAMSDDIAHILADDSLSPTGSVLDQLGEREIEILRQFAGGATTEQIATHLNLSVKTVQN 188 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYEL 209 + I K G + +L+ A L Sbjct: 189 YHYLIKTKTGARTDAQLVRLAASCGL 214 >UniRef50_A5WFD3 Two component transcriptional regulator, LuxR family n=3 Tax=Psychrobacter RepID=A5WFD3_PSYWF Length = 211 Score = 252 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 58/208 (27%), Positives = 113/208 (54%), Gaps = 1/208 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D H ++RM I +L + E++++ + D I ++ D++++D+++P Sbjct: 2 IKVLVVDDHDLVRMGISRMLADDPEIEVIGEADSGEAAIRMVKALSPDVVLLDVNMPNIG 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G KR++Q VK+L +SS S Y ++AG NG+++K +++ A++ + G Sbjct: 62 GVETTKRLRQFDEKVKILAVSSVSSQPYPSMLLKAGVNGYITKGTPLDEMIKAIKKVYQG 121 Query: 124 YTFFPSETLNYIKSNKCSTN-SSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 +F S+ + + N S LS RE + +V+ S ++IAD+L +S KTV+ Sbjct: 122 SKYFSSDVAEQLADMLLTDNEESPFDRLSEREKQVAMMVVNCQSPQQIADQLFVSVKTVN 181 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 ++ I+ K+G+ S V+L A + LI Sbjct: 182 TYRYRIFEKVGVDSDVKLTHLAMRHGLI 209 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 252 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 5/215 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M S++++D H + R + LL + +V + ++ R D+++MDIDLP Sbjct: 1 MSQISLLLVDDHALFREGLASLLSYQPDFTVVGEAASGEEAVERARELVPDVVLMDIDLP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G DG +RIK+ V+V+ L+ + ++I+AGA G++ K ++ ++ + Sbjct: 61 GIDGIEATRRIKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQLRGL 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNS-----STVTVLSNREVTILRYLVSGLSNKEIADKLL 175 G I LS REV +L + LSNKEIA +L Sbjct: 121 ARGEAAISRRMAARILEEFARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIAARLS 180 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S TV H NI KL L S + YA + LI Sbjct: 181 ISEHTVKNHLKNILAKLQLSSRRQAAAYAVAHGLI 215 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 49/209 (23%), Positives = 98/209 (46%), Gaps = 6/209 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 KP ++++D H ++R + L +L +V + + + R D+++MD+ LPG Sbjct: 5 KPIRILVVDDHHVVRSGLAASLGLEDDLNVVGEAGNAGEAVTQFRKHHPDVVLMDLRLPG 64 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G +++ +VL ++ RA+QAGA G++ K + ++ A++ + Sbjct: 65 ANGTAATADLRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAIRAVA 124 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 +G + + + + S+RE +L+ + G +NKEIA L +S +TV Sbjct: 125 AGERHLSAALAQRLAGRVAAPDV------SDREREVLQLIARGKANKEIAAALGISEETV 178 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 H SN++ K+G+ + LI Sbjct: 179 KRHASNLFVKMGVADRAQATSEGIRRGLI 207 >UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR family n=29 Tax=Gammaproteobacteria RepID=Q1QVM5_CHRSD Length = 214 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 109/207 (52%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V++ D H ++R SI +L L+++ + D ++ R D+++MDI +PG Sbjct: 2 IKVLVADDHHLVRTSIARMLDSEDGLKVIAEAVDGEEAVNMARELRPDIVLMDIRMPGIG 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++I + S +KV+ +++ E +A R + AGA GF+SK + +++ A++ I G Sbjct: 62 GLEATRKIMRGMSDIKVVIVTAFLEEAFAQRLMDAGAAGFISKGTELDEMVRAIRAIFDG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + + + +K T + LS+RE+ + +V+ +I+D+L LS KTV+ Sbjct: 122 QRYISPDIAQKVVLSKMGTQDNPFDQLSHRELQVAMMIVNCQKVSDISDRLFLSPKTVNT 181 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 ++ I+ KL + S VEL Y LI Sbjct: 182 YRYRIFEKLNVQSDVELTHLGLRYGLI 208 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 52/224 (23%), Positives = 103/224 (45%), Gaps = 17/224 (7%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 ++I+D H + R ++ +L E ++V +D ++ + D+I+MDI++P Sbjct: 8 NKIQIVIIDDHQLFREGVKRILAMEPEFEVVADGEDGENAVELVEKYNPDVILMDINMPK 67 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G + + Q VKVL LS + Y ++ GA+G++ K D + + AV+++ Sbjct: 68 VNGVEATRDLIQRYPDVKVLVLSIHDDESYVTHVLKTGASGYLLKEMDADALIEAVKVVA 127 Query: 122 SGYTFFPSETLNYIKS------NKCSTNSS-----------TVTVLSNREVTILRYLVSG 164 G + + + + N+ SS + +L+ RE +L+ + G Sbjct: 128 QGGAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECEVLQLMTDG 187 Query: 165 LSNKEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYE 208 SN+ I + L +S KTV H SNI K+ ++ + + + Sbjct: 188 YSNRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAVVESIKNG 231 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 52/217 (23%), Positives = 98/217 (45%), Gaps = 9/217 (4%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +P V++ D ++R V+L + +++V + D ++ D+++MD+ +P Sbjct: 19 RPLRVVLADDQDLVRAGFRVILSSDDGIEVVGEAGDGWEAVEVATRERADVVLMDVQMPK 78 Query: 62 TDGFTFLKRIK----QIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAV 117 DG +R+ KV+ L++ Y A++AGA+GF+ K D+ +V Sbjct: 79 LDGLEATRRLLGPAGADHP-TKVIILTTFDREDYLFEALRAGASGFLLKNASPEDLIESV 137 Query: 118 QMILSGYTFFPSETLNYIKSNKCST----NSSTVTVLSNREVTILRYLVSGLSNKEIADK 173 +++ G E + + + + + L++RE +L L G SN EIA + Sbjct: 138 RIVARGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAKGASNAEIARQ 197 Query: 174 LLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 L+L TV H S I KL L + +A ++ Sbjct: 198 LVLGETTVKTHVSRILTKLNLRDRTHAVVFAYENGIV 234 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 4/207 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +P V++ D HPI+R ++ L +L +V + D + + D++++D+++PG Sbjct: 3 EPIRVLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNMPG 62 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +DG L R+ KV+ L+S +E A+ AGA GF+ K D + + A++ + Sbjct: 63 SDGAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSVA 122 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 G F E + + + V L+ RE +L + +G SN+EIA +L ++ KTV Sbjct: 123 DGQVIFAREAVTAM----TAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEKTV 178 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYE 208 H S+++ KLG+ + YA + Sbjct: 179 KTHLSSLFRKLGVADRTQAALYAVTHG 205 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 55/208 (26%), Positives = 106/208 (50%), Gaps = 2/208 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +++ D H + R ++ +L+K ++IV + + ID + +PVD+ +DI +PG + Sbjct: 3 IRIVLADDHQMFRHALRAMLEKEPGIRIVGEASNGDELIDLISHQPVDIACVDIGMPGMN 62 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +R+ I+ V+V+ LS+ S+ + + AGA G+V+K ++ A+ + Sbjct: 63 GIEATRRLLAIRPHVRVIGLSAFSDRQFVLDLLNAGATGYVTKAEAGEELLRAIHTVQQS 122 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVT--VLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 T+ + + + ++ ++ RE +L+ + G ++ IAD+L L+ TV Sbjct: 123 KTYLCPDVAATVTNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRLHLAPSTV 182 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYEL 209 H+ NI KL LHS+ EL YA + Sbjct: 183 EVHRRNIMRKLDLHSVAELTKYAIRSGI 210 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 5/213 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P +I++D H +IR ++L++ + ++V + R I+ R D+++MD+ +PG Sbjct: 10 PVRLIVVDDHDLIRAGFRLVLEQEPDFEVVGEASSGREAIELCRRLRPDVVVMDLAMPGV 69 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG +RIK+ V VL +++ + Y A++AGA G+V K + + A++ +LS Sbjct: 70 DGLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPRVISALRRLLS 129 Query: 123 GYTFFPSETLNYIKSNKCST-----NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 G + E + + N L+ RE +L + G +N EIA +L++S Sbjct: 130 GESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIARELVIS 189 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 T +H NI KLG+ + + A LI Sbjct: 190 RGTAKSHVQNIIRKLGVSDRTQAVARAFELGLI 222 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 6/212 (2%) Query: 1 MKPTSV--IIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDID 58 MK + +++D H + R +L++ ++ +V + + +++MDI Sbjct: 1 MKAARIAVLVVDDHTLHRDGTRRILEQYDDVDVVGDAASGEDALAMVNRLHPRVVLMDIR 60 Query: 59 LPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQ 118 LPG +G +RI++ +VL +++ + Y A GA G++SK ++ AV+ Sbjct: 61 LPGMNGIEATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVR 120 Query: 119 MILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 + G + + + + + SS L++RE +LR L G+ NK+IA +L +S Sbjct: 121 AVAGGNSVLQPTLMAALLAKR----SSPANTLTDRERAVLRLLAEGMHNKQIASRLGISA 176 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +TV H IYGKLG+ S E + A L+ Sbjct: 177 RTVERHCDRIYGKLGVTSRTEAVVRAISANLL 208 >UniRef50_A6BYP5 Response regulator receiver domain protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BYP5_9PLAN Length = 221 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 4/212 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 + T V+I+D HPI+R L++ +LQ+ + D I + P DLII+DI L Sbjct: 7 QKTKVMIVDDHPIVREGYSRLIEHQDDLQVCGEADSKVDAIRKIMENPPDLIIVDISLKD 66 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G +K +K S +K+L +S E +A R+++AGA G+V+K + A+ +L Sbjct: 67 GSGLELIKDVKAQFSQIKMLTVSMHDETLFAERSLRAGALGYVNKQQAPEQLIKAIYQVL 126 Query: 122 SGYTFFPSETLNYIKSNKCS----TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 G + + + ++ S + LS+RE+ + + G + + IA KL LS Sbjct: 127 KGKVYLSAAVTERMICRSIGSDNYSDQSPIESLSDRELEVFEQIGEGETTRSIAQKLNLS 186 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 +KTV ++ NI KL L + L +A + L Sbjct: 187 SKTVETYRENIKHKLNLENATALTRHAIQWVL 218 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 50/210 (23%), Positives = 103/210 (49%), Gaps = 4/210 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D H I+R+ + L ++++V + + + ++ D+I+MD+ +P D Sbjct: 5 IKVLLVDDHDIVRIGVRSFLGSFDDIKVVGEAANGQEAVEMTAELSPDIILMDMLMPVMD 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++ I+ + +++ L+S + AI+AGA G++ K + +++ A++ + G Sbjct: 65 GIQAIREIRDRKLPGRIIALTSFATDDKLFPAIKAGAMGYLLKDSTPDELLEAIRRVHRG 124 Query: 124 YTFFPSETLNYIKSNKCST----NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 + + S + T L+ RE+ L+ + G SNK IA+++ +S Sbjct: 125 EPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEMFVSEA 184 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 TV H ++I KL L + VE YA + Sbjct: 185 TVRTHMTSILSKLHLANRVEATLYALREGI 214 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 3/206 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 P V+++D I+R ++ + Q E++IV + + I +T D+I+MDI++P Sbjct: 6 NPIRVLLVDDEDIVRYGLKAIAQGTPEIEIVGEAGSGKAAIAQAKTLQPDVILMDINMPQ 65 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG T + I +IQ KVL L++ E Y A+Q GA G++ K D ++Q Sbjct: 66 MDGVTATQEISRIQPHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDFIQSIQQAH 125 Query: 122 SGYTFFPSETLN---YIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 GY + ++ RE +L+ + +G SN+EI++ L ++ Sbjct: 126 KGYLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISETLHITE 185 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYA 204 KTV H S+I ++G+ S +L +A Sbjct: 186 KTVKNHVSSILSRVGVQSRTQLAIWA 211 >UniRef50_C5UZV9 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZV9_9PROT Length = 213 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 108/208 (51%), Gaps = 1/208 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++++D H +IR ++ LL+ +L+I + I LR P DL+++DI+LP Sbjct: 2 IQILVVDDHALIRKGLKQLLEDTPDLKITGEASSGTEAISMLRAAPFDLMLLDINLPDKH 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G LK+ K Q +K++ LS E Y RA++AGA G+++K + + + A++ +LSG Sbjct: 62 GIEVLKQFKSEQPQLKIIILSMYPEDQYGVRALKAGAMGYINKQSASDVLIKAIRHVLSG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSST-VTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + + +N + LSNRE L + SG + EI+ + LS KTVS Sbjct: 122 KKYISEILAEQLLNNLIGESQELMHQNLSNREYQTLCLMASGKTLSEISQIMALSPKTVS 181 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 ++S + K+ + E I YA + L+ Sbjct: 182 VYRSRMLAKMTFTNNAEAIHYAITHRLV 209 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 2/207 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D HP++R + +L + + V D + ++ + + D++++D+ LP Sbjct: 2 IRVLVVDDHPVVRHGLMAMLGWEQDFEPVGDAADGQQAVNLIEQQQPDVVLLDLRLPQLS 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++ + + L L++ Y G A+ AGA G++ K ++F A++ I G Sbjct: 62 GIEVMRHTRASAPNTRFLVLTTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAIRSIYEG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 S + + + LS RE+ +L+ LV G SNK IA L +S T+ + Sbjct: 122 GAALQSGIAARVLKRLATEPAE--DELSQRELDVLQLLVRGESNKAIALSLNISENTIKS 179 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H S+I+ KL + S E + A L+ Sbjct: 180 HVSHIFSKLDVRSRAEAVAVALQRGLV 206 >UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderiaceae RepID=Q1LE49_RALME Length = 264 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 109/211 (51%), Gaps = 5/211 (2%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 SV+I++ H ++R + +L + + D R + DLI+MD+ LPG +G Sbjct: 6 SVLIVEDHNLLRAGLRSMLSAQMGYHVAGEARDGREACQLAISLCPDLILMDLSLPGMNG 65 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 + IK+ ++++ LS Y A++AG +G+V K +D+ A++++L G Sbjct: 66 IDAIAAIKRRSPGIRIIALSVHQNDEYVREALRAGVDGYVLKDTSFDDLVTAMRVVLLGK 125 Query: 125 TFFPSE-----TLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 E +Y+ ++ ST + +L+ RE ++L+ + G SN+++ + LS K Sbjct: 126 KHLSPELYGNLVESYVSGHEMSTAKTGWDLLTARERSVLKLVAEGRSNRQVGIYMNLSPK 185 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 T+ +++++ KLG+ ++ EL+ A LI Sbjct: 186 TIEKYRASLMRKLGITNLTELVLIAISMGLI 216 >UniRef50_C4XMF2 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMF2_DESMR Length = 218 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 54/217 (24%), Positives = 107/217 (49%), Gaps = 7/217 (3%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M ++I+D HP+ R ++ +L+++ + + Y + + DL ++DI LP Sbjct: 1 MPSKRLLIVDDHPLFREGLKAILRRDPSYAVAGEAGSYAEALRTAKDCRPDLAVLDISLP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G + ++Q+ ++ +L +S ++ Y A++ GA G+++K +++ ++ + Sbjct: 61 DRSGIQLARELRQMLPSLGILMVSMHAKVDYVAEALKVGALGYLTKDAATDNLLSGLRAV 120 Query: 121 LSGYTFFPS----ETLNYIKSNKCSTNS---STVTVLSNREVTILRYLVSGLSNKEIADK 173 +G + E + + S L+ RE ++R +V GLSNKE+A Sbjct: 121 AAGQPWLDPTLSVEISRSLLAKTPRAEEESHSAYDSLTPREREVMRLVVEGLSNKEVAAA 180 Query: 174 LLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 L +S KT H+ ++ KLG+ + VEL+ YA LI Sbjct: 181 LEISVKTAEHHRGSLMRKLGMQNSVELVRYATKLGLI 217 >UniRef50_A1WT06 Two component transcriptional regulator, LuxR family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WT06_HALHL Length = 216 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 58/208 (27%), Positives = 109/208 (52%), Gaps = 1/208 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V++ D H +IR +I+ +L+ ++QIV ++ + +R + D+++MD+ +PG Sbjct: 2 IRVVLADDHRLIRQAIDGMLRDIPDIQIVAHAENAEHAVAAVREQEPDVVLMDLQMPGMG 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++R+ + V V+ L+ Y A++AGA G+V K D++++ A++ + G Sbjct: 62 GVEAIRRLYRSHPKVGVIALTVYQSGPYPAHALRAGAKGYVHKGADRDELIEAIRSVYLG 121 Query: 124 YTFFPSETLNYIKSNKCS-TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + E ++ N T S L+ RE +L +++G IA L LS KTVS Sbjct: 122 RRYICHEVARHVALNSLDGTGESPFDHLTPREFEVLMRILNGQRGTSIAKDLCLSPKTVS 181 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 ++S I+ +LG+ + +L A Y L+ Sbjct: 182 TYRSRIFERLGVRNDAQLTRIAIDYGLL 209 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 4/208 (1%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 ++I D H ++R + ++++V + + + DL++MD+ +P DG Sbjct: 2 KIVIADDHHVVRKGLRFFFATQDDIEVVGEAATGLEALRVIEETKPDLVLMDLSMPEMDG 61 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 +K+ Q ++ L+S S+ + A+QAGA + K + ++ + + G Sbjct: 62 IQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKT-RQVHGGE 120 Query: 125 TFFPSETLNYIKS---NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + + ++ + N+ L+ RE +L + +G SNKEIA L +S KTV Sbjct: 121 YKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFISEKTV 180 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYEL 209 H SN+ KL + + +A Y L Sbjct: 181 KTHVSNLLAKLEVADRTQAALFAVKYNL 208 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 56/205 (27%), Positives = 105/205 (51%), Gaps = 2/205 (0%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 + I+D HPI R + L + + IV + + + ++ + D+++MDI +P +G Sbjct: 2 RIFIVDDHPIFREGLIARLSMDDDFVIVGQAANGKEALEKMPNLMPDIVLMDISMPEMNG 61 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 + K +K+L LS + Y + G G+ K ++F+A+++I +G Sbjct: 62 MDAAEIFKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVIHNGG 121 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 ++ + + + + +TV L+ RE T+LR L SGL+NKE+A +L +S +T+ H Sbjct: 122 IYYSRAISDLLVQSSQEPDKNTV--LTTREQTVLRLLASGLNNKELARELDISVRTIETH 179 Query: 185 KSNIYGKLGLHSIVELIDYAKLYEL 209 + NI KL + + L+ YA + L Sbjct: 180 RRNIKDKLAIKTSAGLVRYAIDHGL 204 >UniRef50_B6A2W0 Two component transcriptional regulator, LuxR family n=47 Tax=Proteobacteria RepID=B6A2W0_RHILW Length = 223 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 102/207 (49%), Gaps = 3/207 (1%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 V+++D HP++ ++ +L+ +++ + +D R +++MDI++P Sbjct: 6 KIRVLLIDNHPLVLDGLKAVLETFDHIEVAGTAGLAQTGLDIARQIQPQVVLMDINMPKL 65 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G ++ + ++V+ LS Y ++ GA G+V K ++I A++ + Sbjct: 66 SGIDAIELFRNEFPEIRVVMLSMHDSREYISSSVMHGAAGYVLKDVSTDEIVAAIETVAD 125 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G T+F S + + + S L+ RE IL +V+G SN+EIA+ L +S+ T Sbjct: 126 GGTYFSSGVFDALMGERAEEGSDP---LTPREHDILGLIVAGRSNREIAEVLGISSATAE 182 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYEL 209 H+ N+ KLG+ + LI YA + + Sbjct: 183 THRKNLKKKLGIATTAGLIRYALDHGI 209 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 249 bits (638), Expect = 4e-65, Method: Composition-based stats. Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 6/208 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRT----RPVDLIIMDID 58 P V+++D H ++R + + L +L +V + D + +L DL+I DI Sbjct: 18 PARVLLIDDHALVRDGMRMHLTLQPDLYVVGEADGGEAALAWLERAGARERPDLVITDIG 77 Query: 59 LPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQ 118 + G G + + + VL +S YA +A++AGA G+V K +++ A++ Sbjct: 78 MRGMGGIALTAALHEQYPEIAVLVVSMHDNLEYARQAVRAGARGYVLKDAPADELMAAIE 137 Query: 119 MILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 +L+G F+ + + +T + L+ RE IL + G++NKEIA +L +S Sbjct: 138 AVLAGRVFYSARIARGMAEQMPAT--GPLDALTRRERDILGCIGRGMANKEIATQLGVSV 195 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKL 206 +TV H+ N+ KLG+ L+ YA Sbjct: 196 RTVETHRLNLKRKLGIEGRAGLVKYAVE 223 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 249 bits (638), Expect = 4e-65, Method: Composition-based stats. Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 9/212 (4%) Query: 7 IIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFT 66 ++ D I+R I +LL +++V D + + + D+++MD+ +P DG Sbjct: 2 VVADDQAIVREGIVMLLGLLPGIEVVGAAKDGDEAVALVAEKAPDVVLMDLRMPRCDGVE 61 Query: 67 FLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTF 126 +RI++ +V+ L++ ++ A+QAGA G+++K +I A+ ++SG Sbjct: 62 ATRRIRKEHPRTQVVVLTTFADDDSLFTALQAGARGYLTKDARGEEIVQAIDAVMSGEAG 121 Query: 127 FPSETLNYIKSN---------KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 + + C+ S L+ RE +L + GLSN+EIA L +S Sbjct: 122 LSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIARALHVS 181 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 TV H +N++ K G + + YA L Sbjct: 182 AATVKTHINNLFAKTGARDRTQAVRYAYGRGL 213 >UniRef50_Q47DK2 Two component transcriptional regulator, LuxR family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47DK2_DECAR Length = 211 Score = 249 bits (638), Expect = 4e-65, Method: Composition-based stats. Identities = 60/210 (28%), Positives = 104/210 (49%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MK T +I+ D +IR I +++ QI + D I ++ D++++DI +P Sbjct: 1 MKKTRIILADDQLLIRAGIRAIVETLPGFQIEAECTDGYEAISAIQRLQPDVVLLDIAMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G G + I+Q K+L LSS +A+ AG NG++ K ++ A++M+ Sbjct: 61 GPSGIEVARTIRQFDPNTKILVLSSVDRPEIIEQALAAGVNGYLLKDFVLAELLQALEMV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 L G F + + + S + T L+ R+ ILR + SG + KEIA L +S KT Sbjct: 121 LHGERFLSPKIREMSRFSDAEGTSGSGTQLTARQTEILRLVASGRTTKEIARDLGISPKT 180 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V H+S + ++G+H + L +A ++ Sbjct: 181 VEFHRSRLMERIGVHDVTGLTRFALQTGVV 210 >UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7Q7_9GAMM Length = 226 Score = 249 bits (637), Expect = 5e-65, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 104/207 (50%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +++++D H I+R LLQK L+++ + D + D+++MDI LPG Sbjct: 5 ITIMLVDDHAIVREGYRSLLQKQDNLEVIAEACDGTEAYSQYKKYQPDIVVMDISLPGQS 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++RI+Q + K+L S +A +A +AGA G+++K +D D+ A+ + Sbjct: 65 GLKAIERIRQFDAKAKILVFSMHQNPSFALQATRAGALGYITKSSDPEDLIRAIAEVAKN 124 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 ++ + K S + L+ RE ILR LV SN++IA+ L +S KTVS Sbjct: 125 KHTLSADIAQALAMEKLGQEQSALDELTVREFEILRLLVDAKSNQDIAELLNISPKTVSN 184 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 I KLG+ S +EL A L+ Sbjct: 185 SHYIIKKKLGVSSDIELTRLAIKMNLV 211 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 248 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 54/211 (25%), Positives = 108/211 (51%), Gaps = 5/211 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 SV+++D H ++ + +LL ++++ + + +D + + D++++D+ LP Sbjct: 3 ISVLVVDDHAVLGKGLSMLLNSQDDMEVCGQVGTAKEALDTCKEKCPDVVLLDLSLPDKQ 62 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +K +K+ + +VL L+ + Y R ++AG +G++ K +++ A++ + G Sbjct: 63 GHEIIKELKESC-SARVLALTMHEDEAYFKRVVEAGGDGYILKKAADDELISAIRSVYQG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTV----LSNREVTILRYLVSGLSNKEIADKLLLSNK 179 + + + + T LS+RE +L+ + G +NKEIA+KL +S K Sbjct: 122 EVIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKLYISIK 181 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H + I KLGL+ EL+ YA +I Sbjct: 182 TVETHIARIKEKLGLNRRSELVRYAMRNNII 212 >UniRef50_Q47FR0 Two component transcriptional regulator, LuxR family n=9 Tax=Betaproteobacteria RepID=Q47FR0_DECAR Length = 218 Score = 248 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 58/209 (27%), Positives = 105/209 (50%), Gaps = 2/209 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +I D H I+R+ ++ +L ++ + + + + LR D +++D+ +PG + Sbjct: 2 IRTLIADDHDILRIGLKHILSDTGDIVVTAEASNGIEALVELRKGTFDALVLDLTMPGRN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +K+IK + +L LS E YA R+++AGA+G++ K + + + A++ + G Sbjct: 62 GIELIKQIKGEFPKLPILILSMHKEDIYAVRSLKAGASGYLCKDSAETLLADAIRKVADG 121 Query: 124 YTFFPSETLNYIKSNKCSTN--SSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 F + + T L++RE I ++ GL EI +L LS KTV Sbjct: 122 GLFINQAVAEKLTLQILHGRDTDAPHTGLTDREHQIFLMILQGLGVTEIGRQLNLSVKTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S HK++I K+ L + EL+ YA + LI Sbjct: 182 STHKASILAKMNLRNSAELVRYAIQHRLI 210 >UniRef50_C0GJ72 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ72_9FIRM Length = 212 Score = 248 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 1/208 (0%) Query: 1 MKP-TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDL 59 MK V+++D H ++R + +LL+ + +++ + + + D+I++D L Sbjct: 1 MKKNIKVMLVDDHSVVRQGLRLLLELDDTMEVCGEAETLTGAVAVCAEVAPDVILLDFKL 60 Query: 60 PGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 P DG +K+ VK++ L++ ++ I+AGA+G++ K + ++ + +Q Sbjct: 61 PDGDGIIGCGNLKRQFPQVKIIILTAYADDHLVTETIKAGADGYLLKNVESEELINTIQA 120 Query: 120 ILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 + G + + N S L+ +EV IL + G +NKEIA+ + +S+K Sbjct: 121 VHKGQSVLDPSVTEILFDNIKSQQPKKEHNLTPKEVQILDMISVGKANKEIAEIMKISDK 180 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLY 207 TV + SNI KL + + E Y Sbjct: 181 TVRNYVSNILQKLNVSNRTEAASYWMRN 208 >UniRef50_B0C955 Two-component transcriptional regulator, LuxR family n=4 Tax=Cyanobacteria RepID=B0C955_ACAM1 Length = 215 Score = 248 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 52/208 (25%), Positives = 100/208 (48%), Gaps = 4/208 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +++ D + R + LL+ +L +V + D R I +T D+I+MD+ +P D Sbjct: 2 IRLLLADDQALFRQGLASLLELEEDLSVVGQAQDGRDAILLTQTLQPDVILMDVRMPICD 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + I Q +++L L++ E Y ++QAGA G++ K + + A++M+ G Sbjct: 62 GVEATREIHQRFPWIRILVLTTFDEDEYIWTSLQAGALGYLLKSTPASQLAAAIRMLHDG 121 Query: 124 ----YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 + + ++ + + LS+RE+ +L + G SN+EI+ L L+ Sbjct: 122 HFQLGPTIAPKVIAQLRPPPLKNEQNHLERLSDRELDVLNLIGQGKSNREISQILHLTEG 181 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLY 207 TV + S + G LG+ + +A+ Y Sbjct: 182 TVKNYVSQLLGSLGVRDRTQAALWAQQY 209 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 248 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 56/209 (26%), Positives = 114/209 (54%), Gaps = 2/209 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +++I D H +IR ++ LL+ + +++++ + ++ +D L+T D++++DI++P + Sbjct: 3 INIMITDDHSMIREGLKNLLELDGDIKVIAEAENGEDCLDKLKTFRPDVLLLDINMPKMN 62 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G LK +K +S VKVL L+ +E Y +A+ G NG+V K ++ ++ A+ I G Sbjct: 63 GLEVLKALKDRKSKVKVLVLTVHNETEYLMKAVDIGINGYVLKDSESAELKKAIFTIADG 122 Query: 124 YTFFPSETLNYIKSNKCSTNSSTV--TVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 T+ + + S N + L+ RE+ +L+ + G N++IA ++ +S +TV Sbjct: 123 ETYIQPSLIPALNSKMIQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISERTV 182 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 H S+I+ KL + + +A +I Sbjct: 183 KNHISSIFKKLEVTDRTQAAVFAIRNNII 211 >UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C48EF Length = 220 Score = 248 bits (635), Expect = 8e-65, Method: Composition-based stats. Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 3/210 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M T +++ D H I+R + L+ +L++V + T+D +R ++ +D+ +P Sbjct: 1 MPRTRIVLADDHVILREGLRALISAQPDLEVVGEAASGTETVDCVRATEPRVLCLDLSMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G T + R+ Q+ +VL L+ ++ Y A+ AGA G+ K D+ A++ + Sbjct: 61 GWGSATTITRVTQLAPRTRVLVLTMHNDPAYVRSALAAGAAGYFLKTTPSPDLLAAIRAV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 +G + + S LS RE +L LV GL+++EIAD+L LS KT Sbjct: 121 ATGARVIDPALGDVLGGPPPPAERS---QLSRRETEVLELLVKGLTHQEIADQLFLSVKT 177 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V +++ + K GL + + + Y L+ Sbjct: 178 VETYRARLREKTGLKTRADYVRYGLEAGLL 207 >UniRef50_B6JD38 Two component transcriptional regulator, LuxR family n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JD38_OLICO Length = 210 Score = 248 bits (635), Expect = 8e-65, Method: Composition-based stats. Identities = 58/208 (27%), Positives = 107/208 (51%), Gaps = 2/208 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 T +II D H I R + +L + ++ +V + + + LR P D++++D+ +PG Sbjct: 2 TRIIIADDHTIFREGLRQILAEANDFTLVGEATNGDDLLVRLREAPCDIVLLDLSMPGIS 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G T ++ ++I +++ LS E Y A++AGA+G+V+K + + + A++ + G Sbjct: 62 GITLVRAAREIAGAHRIIVLSMHEEHQYVVEALKAGADGYVTKNSASDQLIAAIRKVSQG 121 Query: 124 YTFFPSETLNY--IKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 F + ++ + S T L+ RE + LV+G IA L LS KTV Sbjct: 122 ELFVSAAASQEAILREMRTSPTELPHTRLTRREREVFDMLVAGHKISRIARDLDLSIKTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYEL 209 S HK+N+ K+ + +L+ YA ++L Sbjct: 182 STHKTNLLAKMDAETTADLVRYALRHDL 209 >UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=C4L5Q6_EXISA Length = 230 Score = 248 bits (635), Expect = 9e-65, Method: Composition-based stats. Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 16/224 (7%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M T + I+D H + R ++ + E +V + R I + +++IMDI++P Sbjct: 3 MTQTRIAIVDDHELFREGLKRIFDLEDEFTVVAEGRTGREAIRIAGEQKPEILIMDINMP 62 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 +G K++ + +VL LS + Y A++AGA+GF+ K ++ AV+ + Sbjct: 63 DMNGIEATKQLSLLSPETRVLILSIHDDESYITHALEAGASGFLLKEVASTELISAVRAV 122 Query: 121 LSGYTFFPSETLNYI----------------KSNKCSTNSSTVTVLSNREVTILRYLVSG 164 + + + + + T+ +LS REV +L L G Sbjct: 123 AKDGAYLHPKVTTNVLKEYRRLLQFKGEQAGRGVESRTDDPVYQLLSRREVEVLHLLADG 182 Query: 165 LSNKEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYE 208 SN++I+D L +S KTV H S++ K+ ++ + + A Sbjct: 183 RSNRDISDMLFISEKTVKNHVSSVLRKMDVNDRTQAVVDAIRRG 226 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 248 bits (635), Expect = 9e-65, Method: Composition-based stats. Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 4/211 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M P V ++D H I+R + L ++ +V + + + T D+I+MD+ +P Sbjct: 1 MSPIRVALVDDHSIVRRGLSAYLAAQPDIVVVGEAANGESALQMASTWQADVIVMDVLMP 60 Query: 61 G-TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 G DG +++K++ ++ LS ++ A++AGA ++ K + + A++ Sbjct: 61 GGIDGIETTRQLKRLIPHTHIIILSGYADDARVIGALRAGAITYIEKESQPEQLLEAIRG 120 Query: 120 ILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 ++G + I + S + L+ RE +L+ + GL+N EIA +L +S + Sbjct: 121 AMAGKAVLAPALMQRILEAQTSKAA---DTLTEREREVLKLVAEGLTNAEIASRLTVSEE 177 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H ++I KLGL + YA + L+ Sbjct: 178 TVKTHVASILRKLGLAHRTQAAIYALRHGLV 208 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 248 bits (635), Expect = 9e-65, Method: Composition-based stats. Identities = 50/210 (23%), Positives = 104/210 (49%), Gaps = 5/210 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M+ +++ D HP++R + +L ++V + D + D++++D+++P Sbjct: 1 MEGIRILVADDHPMLREGLSAVLGTRPGFEVVGEAGDGEEVLRLASGLRPDVVLLDLEMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 GT G L+R++ + KV+ ++ + A++ GA G + K + +IF AV+ + Sbjct: 61 GTGGVEVLRRLRGLDDPPKVVVFTAYDDERLL-EALREGARGCLLKGASRTEIFDAVRTV 119 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 +G + P E + + L+ RE+ +LR + GL+N+E+A L +S +T Sbjct: 120 HAGGSVIPPEITARVLKEMRGES----EPLTPRELEVLRLVARGLTNREVARALFISERT 175 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V H S++ KL + + + A+ L+ Sbjct: 176 VKFHVSSLLAKLRAENRTQAVAIARERGLL 205 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 1/207 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++I + ++R + LL ++ IV + +D + I+ RT D+++MD+ +P D Sbjct: 3 VRILIAEDQQLVRQGLVALLA-VDDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMPELD 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +RIKQ+ V+VL L+ + A+ AGA+G+ K ++ A+ + +G Sbjct: 62 GVEATRRIKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLGHGELMAAINAVCAG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 T+ + + L+ RE +L+ + G N+EIAD+L ++ KTV Sbjct: 122 KTYLGPGLSEDLVKEYLEGSDMGGGSLTAREREVLQLIARGHKNREIADELGIAIKTVET 181 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H++ I KL LH+ EL YA LI Sbjct: 182 HRTKIMQKLDLHNSAELAAYAIRRGLI 208 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 7/206 (3%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MK V+I D HP+ R + +L + +++ + + DL++MDI +P Sbjct: 1 MKSIRVLIADDHPLFRQGVSSVLANTPDNEVIAEAGSGEEAVQMACNLLPDLVLMDIQMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 +G ++I + ++ ++ + A+QAGA G+V K ++ DI AV+ I Sbjct: 61 DLNGIEATRKILSKCRDIYIIIITMFEDDTSVFSAMQAGARGYVLKDAEKEDILRAVRAI 120 Query: 121 LSGYTFFPSETLNYIKS-------NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADK 173 G F S + + + S+ L++RE +L L G SN E+A+ Sbjct: 121 AKGEVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEVAET 180 Query: 174 LLLSNKTVSAHKSNIYGKLGLHSIVE 199 L LSNKTV + +NI KL + E Sbjct: 181 LGLSNKTVYNYVANILNKLQVSDRQE 206 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 99/207 (47%), Gaps = 6/207 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I D H I R + ++ ++ E+Q+V + ++ I D+ +MD+ +P + Sbjct: 7 IRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDLRMPEVE 66 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + I + +++ L++ R +QAGA G++ K + +++ +A++ + G Sbjct: 67 GVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHRG 126 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + + P + + + LS RE+ +LR L G+SN +IAD L + TV + Sbjct: 127 HKYIPPDVGAKLVQRLSNPE------LSERELEVLRSLAQGMSNADIADALSIGEGTVKS 180 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H + I KL + + + A ++ Sbjct: 181 HVNRILNKLDVSDRTQAVIVAVKRGIV 207 >UniRef50_UPI0001C314AF two component transcriptional regulator, LuxR family n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AF Length = 228 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 104/207 (50%), Gaps = 2/207 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I D H ++R + ++L ++ +V + D +R ++++D+++PG Sbjct: 14 IRVVIADDHRVVRSGLRMVLDAEPDIAVVAEAGDVPSAERAVRAHHPHVLVLDLNMPGEQ 73 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 + R+ V+ L+ + + +A A+++GA G+V K +++ AV++ G Sbjct: 74 SLPAIPRLVAELPETAVVVLTMQQDPAFAREALRSGARGYVLKEAADDELVQAVRLAREG 133 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 T+ E + + S L+ RE+ +LR + G +N EIA +L LS +TV + Sbjct: 134 RTYLNPELGARMAAEP--PPSGPPDDLTARELEVLRLIALGHTNAEIAQQLFLSIRTVES 191 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H+++I K+ S EL+ YA + L+ Sbjct: 192 HRAHIQQKVRRSSRAELVRYALDHGLM 218 >UniRef50_B4D2X8 Two component transcriptional regulator, LuxR family n=2 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2X8_9BACT Length = 242 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 4/207 (1%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 V+++D HP IR + ++ + +L + + ++ +R D+ ++DI +PGT+G Sbjct: 24 RVLLVDDHPAIRRGMAAIIDEEPDLTTCGEASTAPMALEAMRRLNPDIAVIDISMPGTNG 83 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 +K + Q +++L LS E YA RA++AGA G+V K + ++ + G Sbjct: 84 VELIKLMLAEQPGLQILMLSMHDESVYALRALRAGAKGYVMKGEALECVLTGLRKVGEGE 143 Query: 125 TFFPSETLNYI----KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 + + + + + + +S V LS+RE +LR L G ++EIA++L LS KT Sbjct: 144 IYVSPKFSDRLIFKTIQSTIAGVASPVDKLSDREFEVLRLLGRGFGSREIAEELSLSVKT 203 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLY 207 V H+++I KLG E++ +A + Sbjct: 204 VETHRAHIKEKLGFKEAGEMVRFAIDW 230 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 49/210 (23%), Positives = 98/210 (46%), Gaps = 4/210 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D H I+R ++ +L +++V + + R I D+++MD+ +P + Sbjct: 13 IRVLLVDDHKIMRKGLKAILALEHTIEVVAEAANGREAIRKADELLPDVVVMDLTMPEMN 72 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +++I V+ L LS + +AGA G++ K ++ A+ + SG Sbjct: 73 GIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGATGYLLKDCAVEELVGAIHTVASG 132 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVT----VLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 + + + + + + + LS RE +L+ + +G S KEIA +S K Sbjct: 133 EPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFGVSIK 192 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 TV+ + ++ KL L ++ +L YA L Sbjct: 193 TVAVQRMSVMKKLNLFNVADLTKYAVREGL 222 >UniRef50_C1A5E6 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5E6_GEMAT Length = 213 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 110/207 (53%), Gaps = 4/207 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 T V+++D H ++R + VLL+ + +V + + + DL+I+D+++PG D Sbjct: 5 TRVVLVDDHSLVRRGLAVLLRLDGRHDVVGEAGTGEAAVPLIEAERPDLVILDLNMPGID 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G L+R++ T +VL LS E G+A+ AGA+G++ K + +++F A++ +L G Sbjct: 65 GLETLRRVRAKGLTTRVLVLSMHDETHLVGQALSAGADGYLLKDSMDDELFFAIESVLRG 124 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + I + + L+ RE +L+ + +GL+ +A+ L +S T + Sbjct: 125 QRYL----AAAIDRARLQESRMRPVSLTAREREVLQLIANGLTTSAVAEALNISPHTATR 180 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H++N+ KL +H+ VEL+ A LI Sbjct: 181 HRANLMQKLNVHNQVELVRIAASQGLI 207 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 6/214 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P V+I++ ++R + LL +++V + D ++ L +++++D+ +P Sbjct: 4 PVRVMIVEDQALMREGLRTLLDLEEGVEVVGEAADGVEALERLPGARPEVVLVDVRMPRM 63 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG ++R+ + V + L++ + Y R ++AGA G++ K ++ A++ + Sbjct: 64 DGIQLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGARGYILKDTPSEELAAAIEKVHR 123 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTV------LSNREVTILRYLVSGLSNKEIADKLLL 176 G + S + LS RE+ +LR + SG SN+EIA L + Sbjct: 124 GEAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIARALYI 183 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 + TV H S+I KLG + YA I Sbjct: 184 TEGTVKNHISSILRKLGFRDRTQAALYALERGWI 217 >UniRef50_C5V5K1 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K1_9PROT Length = 211 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 116/207 (56%), Gaps = 1/207 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +I+ D H ++R + L + +++V + + + L+ VDL+++D+D+PG + Sbjct: 3 VRLIVTDDHELVRAGLLQLFEGAPGIEVVGEAVNGEELMRKLQATQVDLVLLDLDMPGEN 62 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++RI++ + +L LS+ E RA+QAGA+G++ K + A+ +++ Sbjct: 63 GANLIERIRRHYPDLLILILSAHDEIKVVSRAVQAGASGYICKDCSPKTLLEAIHKVVAT 122 Query: 124 YTFFPSETLNYIKSNKCSTNSST-VTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + + ++ + +LS+RE I R LV GLSN +I+ +L +S++TVS Sbjct: 123 GKYLSPLMAEELAYTSAIPQANNSLALLSSREQEIFRLLVEGLSNDDISRQLFISDRTVS 182 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYEL 209 AHK N+ KLGL ++VEL+ Y+ ++L Sbjct: 183 AHKINLLNKLGLKNVVELVHYSIQHQL 209 >UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 Tax=Methylococcus capsulatus RepID=Q60AR8_METCA Length = 215 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 56/212 (26%), Positives = 104/212 (49%), Gaps = 3/212 (1%) Query: 1 MK-PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDL 59 MK +V+++D H ++R +LL +++V + + D+I+MD+ L Sbjct: 1 MKSKITVMLVDDHAVVRAGYRLLLSGTPNIEVVGEAERGEEACQLYADTRPDVIVMDLSL 60 Query: 60 PGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 PG G ++RI+ ++ ++L S E Y RA++AGA G+++K + AV Sbjct: 61 PGIGGLASIRRIRSRDTSARILVFSIHDELIYVVRALEAGARGYITKSCAPEILVEAVAR 120 Query: 120 ILSGYTFFPSETLNYIKSNKC--STNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 I SG +F E + + ++ + LS RE + L G + +E+A++L L Sbjct: 121 IASGESFLEPEIAQRLAMQTLGGAEATTALNTLSAREFDVFLLLAKGYTTREVAEELRLG 180 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 KTV+ + + I KLG+++ E+ A + Sbjct: 181 YKTVANYSTLIKSKLGVNTTAEMARLAYQNGI 212 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 4/209 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V++ D H + + LL K +++ D + D+ +MD+ +P + Sbjct: 3 IRVLLADDHEMFLEGLRELLGKADGIELAGLARDGAEAVAAAERLQPDVALMDMTMPRLN 62 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++I KVL LS + +++AGA G+V K ++ A+Q + +G Sbjct: 63 GIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGARGYVLKECSSQELCLAIQTVANG 122 Query: 124 YTFFPSETLNYIKSNKCS----TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 + L+ + + + LS RE+ +L+ LV G + K+IA++L +S Sbjct: 123 QYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQLSISKN 182 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYE 208 TV H+ +I KLG +S+ EL YA Sbjct: 183 TVDTHRRHILDKLGCNSMAELTRYAIREG 211 >UniRef50_C4XNR8 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNR8_DESMR Length = 220 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 54/215 (25%), Positives = 105/215 (48%), Gaps = 6/215 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M T +I+ D H ++R + +L+ + +V + D + + P +++++D+ +P Sbjct: 1 MATTRIILADDHTVLRTGLRLLIDNQPDFTVVGEAADGEALLALVERVPAEVLVLDLSMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G +K +K +K+L L+ Y A+ AGA G++ K +++F A++ + Sbjct: 61 RVSGLECIKELKSRGQEIKILVLTMHG-REYVKEAMAAGALGYIEKQALDSELFVAIRTV 119 Query: 121 LSGYTFFPSETLNYIKSN-----KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 SG + + + + + VL+ RE +L+ LV G + +IA L Sbjct: 120 ASGRRYMSPDNAEVLLDQLLSPTPQAASPDPYAVLTAREREVLKLLVRGHTLTQIAGLLH 179 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 LS KT+ HK+++ KL L +L+DYA + L+ Sbjct: 180 LSVKTIDTHKTHVMEKLNLTHKSQLVDYALRHGLL 214 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 101/219 (46%), Gaps = 10/219 (4%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K +++ D H + R ++ +L +L + + + +D ++ ++I+MDI++P Sbjct: 8 KTIRILLADDHALFRQGLKKILDMEEDLAVCGEAQNGEEVVDKVKLLKPNIILMDINMPL 67 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G K +K++ KV+ L+ + Y ++ GA GF+ K + + A+Q + Sbjct: 68 LNGVEATKYVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPTLVQAIQEVN 127 Query: 122 SGYTFFPSETLNYIKS----------NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIA 171 G +F + + ++ + + L+ RE IL + G +NKEI+ Sbjct: 128 KGNSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYTNKEIS 187 Query: 172 DKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +L +S KTV H SNI K+ + + + A ++ Sbjct: 188 KELYISEKTVKNHVSNILRKMDVTDRTQAVITALKCGVV 226 >UniRef50_A2SLK8 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiales RepID=A2SLK8_METPP Length = 226 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 60/223 (26%), Positives = 106/223 (47%), Gaps = 16/223 (7%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRT-----RPVDLIIMDID 58 V+I D H I+R I+ +L ++ + + + + +R P D++++DI Sbjct: 2 IRVVICDDHVIVRQGIKQILADAGDIALAGEAGNGPDAMTLVRAGAAAGTPPDVVLLDIA 61 Query: 59 LPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQ 118 +P DG LK +K + VL LS+ + YA R+++ GA G+++K D + A++ Sbjct: 62 MPQRDGLDVLKSLKAEFPRLPVLMLSTYPDRQYAVRSLKLGAAGYLNKSADSEQMIDAIR 121 Query: 119 MILSGYTFFPSETLNYIKSNKCST-----------NSSTVTVLSNREVTILRYLVSGLSN 167 + G F + + + LS+RE + L +G S Sbjct: 122 RVAQGKLFITPSVAEQLAGAVGAGIGSRKGGVGDDEAPLHERLSHREYQVFGLLAAGKSV 181 Query: 168 KEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 EIA++L+LS+ TVS +++ I K G+ + VEL YA EL+ Sbjct: 182 GEIAEQLVLSSNTVSTYRARILEKTGVRNDVELALYAVRQELM 224 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 5/210 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +++++D H +IR I LL+ +L +V + D + +R D+++MD+ +P Sbjct: 2 INIVLVDDHALIREGIRSLLEFTPDLHVVGEASDGEEAVKRVRELSPDVVLMDVRMPRMT 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G L+ +++ +V+ L++ E A++AG GF+ K ++ + A++ + +G Sbjct: 62 GLEALRAMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRVANG 121 Query: 124 YTFFPSETLNYIKSNKCS-----TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 T P ++ ++ L+ RE+ ++R + GLSN+EIA L + Sbjct: 122 ETLLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATVLGTAE 181 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYE 208 TV SNI KLG+ + A Sbjct: 182 GTVKNQTSNILAKLGVRDRTRAVLRAMELG 211 >UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGZ7_9SPHI Length = 218 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 68/218 (31%), Positives = 119/218 (54%), Gaps = 14/218 (6%) Query: 7 IIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVD------LIIMDIDLP 60 +++D H I+R I +LL++ L+I+ + +D +D L+ D LI+MDI LP Sbjct: 1 MLVDDHSIVRDGIRLLLEQADGLEIIDEANDGEEVLDKLKVLQPDPSLLPDLILMDISLP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G G + I ++ V+VL LS + Y R+++AGA G++ K + +++ A++ I Sbjct: 61 GMSGIQTTQVISRLYKNVRVLMLSMHNNEDYILRSVEAGAYGYILKDSSSDEMIKAIRTI 120 Query: 121 LSGYTFFPSETL--------NYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIAD 172 SG ++ S +K + + LSN+E IL++LV G+S++EIA+ Sbjct: 121 ASGEKYYSSPVASIILSGYMQQLKKGDRHGRAERQSKLSNKEKEILQFLVDGMSSREIAE 180 Query: 173 KLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 KL LS +TV H++N+ +L + + EL+ A +LI Sbjct: 181 KLQLSVRTVDNHRANMMRRLQVRNAAELVRMAVEDKLI 218 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 5/206 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M T V+I D H ++R + LL + ++++V + D + +D + D+++MDI +P Sbjct: 1 MAKTKVLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEAVDMVAQFKPDVVLMDIVMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G K IK+ + +L L++ S+ Y ++AGA+G++ K ++I A++ I Sbjct: 61 RLTGVEATKLIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAIRAI 120 Query: 121 LSGYTFFPSETLNYIKSN-----KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 +G + S + K S LS REV IL+ GLSN+EIADKL Sbjct: 121 KAGESVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIADKLT 180 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELI 201 LS +TV AH SNI+ K+ E I Sbjct: 181 LSMRTVKAHLSNIFNKMRCSCRTEAI 206 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 106/206 (51%), Gaps = 2/206 (0%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 V+I D H ++R + ++L ++E+++V +T + R + R D+++MD+ +P DG Sbjct: 4 RVLIADDHAVVRQGLRMILGLDNEIKVVGETTNGREAVRLARELCPDVVLMDLLMPVMDG 63 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 + I+Q V+V+ L+S + A++AGA GF+ K + +D+ +AV+ +G Sbjct: 64 VSATAEIRQDIPEVEVVALTSSLDDAMVMGAVRAGAIGFLLKNAEADDLRNAVKAAAAGQ 123 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 ++ + S L+ RE +L L G +NKEIA L + +TV + Sbjct: 124 IHVSPAAISRLMGQ--VREPSGPEQLTERETEVLTMLARGKANKEIARDLRIGQQTVKTY 181 Query: 185 KSNIYGKLGLHSIVELIDYAKLYELI 210 S+I KLG+HS + YA L+ Sbjct: 182 VSHILTKLGVHSRTQAAVYAVQSGLV 207 >UniRef50_C6WV69 Two component transcriptional regulator, LuxR family n=2 Tax=Betaproteobacteria RepID=C6WV69_METML Length = 216 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 1/209 (0%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 VII D H I+R ++ +L + ++ ++ + + I D++++DI LP Sbjct: 7 KIKVIIADDHAILRAGLKQILSETEDILVIAEAQNANEAIKLGSQPEADVLLLDISLPDR 66 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G LK IK+ S + VL LS E YA RA+++GA G++ K + +++ +A+Q + Sbjct: 67 SGMEALKYIKRENSHIAVLMLSMHREDEYAIRALKSGAAGYLCKQSASSELVNAIQTVAR 126 Query: 123 GYTFFPSETLNYIKSNKCSTN-SSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 G + E + + + + +LS+RE + SGLS ++A+KL LS KTV Sbjct: 127 GKKYITPEVAEILANQIGRDDQKAPHELLSDREYQTFIMIASGLSVTDVANKLSLSVKTV 186 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S +++ + K+ L EL YA + L+ Sbjct: 187 SMYRARLLEKMQLKHNAELTHYAFKHNLV 215 >UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4B6_LISGR Length = 214 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 54/211 (25%), Positives = 107/211 (50%), Gaps = 5/211 (2%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP-GTD 63 ++I D H ++R +++ ++ +++++ D ++ + D+++MD+ +P G + Sbjct: 2 KLLIADDHAVVRSALKFMINAQKDMEVIGDAADGTEAFLFIESNRPDIVLMDLSMPPGEN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G KRI + KV+ L+ E Y +A+QAGA G++ K + + + A++ ++ G Sbjct: 62 GLLTTKRITEAFPETKVILLTMHDEEAYITQALQAGAQGYIMKNSSEELLLDAIRSVMGG 121 Query: 124 YTFFPS----ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 + + + + + + LS RE IL + G NKEIA++L +S K Sbjct: 122 QIIIDPVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAERLFISAK 181 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV HKS+I KL + +L+ + +LI Sbjct: 182 TVEVHKSHIMKKLEMKKFSDLLRFCVKEQLI 212 >UniRef50_A0NNP3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNP3_9RHOB Length = 205 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 52/204 (25%), Positives = 100/204 (49%) Query: 7 IIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFT 66 ++ D H ++R I LQK ++L++V + + R + D+++MD+ +P +G Sbjct: 1 MLADDHELVRDGIRARLQKVADLEVVGEATNGREALTLAHDLRPDVLLMDVSMPVMNGLE 60 Query: 67 FLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTF 126 +++++ + VL LS Y +QAGA G++ K ++ A+ + SG + Sbjct: 61 AATQMRKLLPEIAVLILSVYDNPEYVRGVVQAGARGYILKDISAAEMITAITSVASGGYY 120 Query: 127 FPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHKS 186 F S + S L++RE +L + G NKE+A +L +S +TV +H+ Sbjct: 121 FSSAVGPTLVGAGTSAPVEDPYGLTDRERQVLTAIARGQPNKEVAKELGISVRTVESHRL 180 Query: 187 NIYGKLGLHSIVELIDYAKLYELI 210 N+ K+G + +L A+ L+ Sbjct: 181 NLREKVGNKNAAQLYKVAQDLGLL 204 >UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC81D Length = 209 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 1/207 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V++ D H ++R + +L N ++ +V + DD I + D+I+MDI +P Sbjct: 3 IRVVLADDHVLMRQGVSQMLNANPDISVVGECDDGVALIAAVLKLSPDVILMDISMPRMS 62 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + +I +S K+L LS +E Y AGA G++ K + + A++ + + Sbjct: 63 GLVAIDKILSQRSDAKILVLSMHNEVEYIEAMRDAGAKGYILKESSGESLVEAIKKVAAN 122 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 T FP E S++C + S ++VL+ RE + +V+G ++K+IA+ L +S KT Sbjct: 123 KTCFPDELTQS-SSDQCQKHVSPLSVLTRREREVFFLVVAGNTSKKIAELLDMSLKTAEN 181 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H+SNIY KL L S ELI A L+ Sbjct: 182 HRSNIYKKLNLSSSAELIRMAGKAGLL 208 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 106/207 (51%), Gaps = 3/207 (1%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 V+I D H + R I+ LL+ Q+V + + + ++ + DL++MD+ +P G Sbjct: 1440 RVVIADDHALFRDGIKSLLESE-GFQMVGEASNGQEAVELVHNLSPDLVLMDLSMPVMGG 1498 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 ++ I + +VKV+ L++ E AI+AGA GF+ K + + F ++ ++ G Sbjct: 1499 LDAIRLISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQLLRNVIRGE 1558 Query: 125 TFFPSETLNYIKSNKCST-NSSTVTVLSNREVTILRYLVSGL-SNKEIADKLLLSNKTVS 182 + SS++ +L++RE IL+ LV+G+ S K+++ +L +S TV Sbjct: 1559 PAITPRLAGKLIDEFSRPVRSSSLQMLTDREQEILQLLVNGVTSTKDLSRQLGVSEHTVK 1618 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYEL 209 H NI KL L S +++ +A + L Sbjct: 1619 YHLRNILSKLHLQSRAQVVAWAVQHGL 1645 >UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10 Tax=Bacteria RepID=Q1IXN1_DEIGD Length = 221 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 51/208 (24%), Positives = 98/208 (47%), Gaps = 2/208 (0%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +P V+++D H ++R + + L +S++++V + + + D++IMD+ +P Sbjct: 8 RPVRVLLVDDHAVVRQGLRLFLSLDSQIEVVGEAANGEEALAAAERLHPDVVIMDLMMPV 67 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG + +++ +V+ L+S E AI AGA G++ K + + A+ Sbjct: 68 MDGIQATRLLRRQHPDTEVIALTSTLEEHKVNGAIDAGAMGYMLKDASSDTLADAIHAAA 127 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 G E + + + L+ +EV +L+ + G SN++IA ++ TV Sbjct: 128 RGEVRLHPEAARRLVRDFRTPEMR--ETLTPKEVIVLQLIARGYSNRDIARDQGVTEATV 185 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYEL 209 H S + GKLGL S + YA + L Sbjct: 186 KTHVSRLLGKLGLESRTQAALYALRHGL 213 >UniRef50_Q39TN7 Two component transcriptional regulator, LuxR family n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TN7_GEOMG Length = 210 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 59/208 (28%), Positives = 110/208 (52%), Gaps = 1/208 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 T +++ D H I R ++ ++ ++ +V + D + ++ ++ D++I+DI +PG + Sbjct: 3 TRILVADDHAIFREGLKQVIGTTVDMSVVDEAVDGKELLNKIQANDYDMVILDITMPGRN 62 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G L +K I+ + VL +S E YA RA ++GA G+++K + N++ A+ I G Sbjct: 63 GLDVLTEMKSIKPKLPVLVMSMHPEEQYALRAYKSGAAGYLNKGSASNELLDALHKISMG 122 Query: 124 YTFFPSETLNYIKSNKCSTN-SSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + S + S N + LSNRE ++ + SG + +IA +L LS KTVS Sbjct: 123 KKYVSSALAESLVSGLSDHNQQDLLQSLSNREYQVMSMIASGKTVGKIATELSLSVKTVS 182 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 ++++I KL + + EL + +LI Sbjct: 183 TYRAHILRKLNMKNNAELTRFVIENKLI 210 >UniRef50_A9AX03 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX03_HERA2 Length = 218 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 5/211 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++I D ++R + ++L +L+++ + R + T DLI+MD+ +P + Sbjct: 2 IKLLICDDQAVVRDGLSIMLNLAPDLEVIAVASNGREAVQLSATWQPDLILMDLKMPIMN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++I Q VK+L L++ + + AI+AGA G++ K +D+ A++ +SG Sbjct: 62 GIEATRQISAAQPLVKILVLTTYDDDEWLFEAIRAGAAGYLLKDMAHSDLVSAIRGTVSG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVT-----VLSNREVTILRYLVSGLSNKEIADKLLLSN 178 + + S ++ + L+ RE+ +L + +G +N IA++L LS Sbjct: 122 KAYVDPNVTARLLSQVATSRNQPPASQLTGRLTERELAVLNLIATGHTNASIAEQLRLSE 181 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 TV H S I KL + + A + L Sbjct: 182 GTVRNHVSTILSKLDVADRTQAALLAVEHGL 212 >UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1 Tax=Bacillus subtilis RepID=YXJL_BACSU Length = 218 Score = 245 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 5/213 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 V + D P++R ++ +++ + + D I + D+I+MD+ +P Sbjct: 5 KIRVALADDQPLVREGFRYVINAQTDMTVSGEAGDGHDIIALAKQTKPDVILMDVQMPRC 64 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G K I K++ L++ Y I+AGA G++ K ++ A++ Sbjct: 65 SGIEAAKDIMSALPNTKIVILTTFDTEEYVFEGIRAGAVGYLLKDTLPEELIDAIRAAAR 124 Query: 123 GYTFFPSETLNYI-----KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 G F + T I ++ + + + RE+ +L+ + GL N++IA+KL +S Sbjct: 125 GEAIFRTVTAAKIISETFRAKQQTHAEELAEPFTKRELEVLQQMAYGLRNEDIAEKLFVS 184 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H I K + + +A ++ Sbjct: 185 ESTVKTHVHRILQKCNAQDRTQAVVFAIRNGIV 217 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 245 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 1/207 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+ +D H ++R+ I L S++++V + + I DLI+MD+ + D Sbjct: 3 IKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMD 62 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +IK+ +KVL L+S E RA+ AG + ++ K DI AV+ G Sbjct: 63 GVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSRG 122 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + F E L ++ N+ + +L+ RE+ IL + G SN+EIA ++ KTV Sbjct: 123 ESVFEPEVLVKMR-NRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVKT 181 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H SNI KL + + + YA + LI Sbjct: 182 HVSNILSKLEVQDRTQAVIYAFQHNLI 208 >UniRef50_A1VT42 Two component transcriptional regulator, LuxR family n=7 Tax=cellular organisms RepID=A1VT42_POLNA Length = 224 Score = 245 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 56/212 (26%), Positives = 104/212 (49%), Gaps = 6/212 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYL----RTRPVDLIIMDI 57 + +I++D HP +R + + L+ ++++V + + R +++ DI Sbjct: 3 ETIRLILVDDHPFVRDGVRMRLEATDDIRVVGEAGSVDEAMQLATDLGDERAPHIVLTDI 62 Query: 58 DLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAV 117 + G G + + VL LS + Y RAI++GA G+V K ++ +A+ Sbjct: 63 SMRGMSGIELAALFQHRFPGIDVLVLSMHNNLEYVKRAIESGAKGYVLKDAPAQELVNAI 122 Query: 118 QMILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 + + +G TFF E Y + + S+ + + L+ +E L +L G SNK+IA +L +S Sbjct: 123 RAVHAGETFFSPELQQYTEGFRASSGGN--SPLTPKESATLAWLACGYSNKQIARELSMS 180 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 +TV H+ N+ KL + EL+ YA + L Sbjct: 181 VRTVETHRLNLRRKLRITGQAELVKYAIDHML 212 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 245 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 51/209 (24%), Positives = 102/209 (48%), Gaps = 5/209 (2%) Query: 7 IIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFT 66 +++D + R + +LL + +++V + D + T D++++DI +P G Sbjct: 2 LVVDDQELFRRGLTMLLGTEAGIEVVGEAGDGVEGTNLAATAAPDVVLLDIRMPKRSGIE 61 Query: 67 FLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTF 126 IK+ + K++ L+ E A+++GA+G++ K + ++ AV+++ G + Sbjct: 62 ACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVADGQSL 121 Query: 127 FPSETLNYIKSN-----KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + + + L+ RE+ +LR + G++N+EIA +L +S TV Sbjct: 122 ISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFISENTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 H NI KL LHS +E + YA +L+ Sbjct: 182 KNHVRNILEKLQLHSRMEAVMYAVKEKLL 210 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 245 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 1/206 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++++D HP+ R + LL + +IV + D + R DL+++D+++P + Sbjct: 6 IRILLVDDHPLFRRGLSFLLAQEYGFEIVAEATDGLEGVKLARFHRPDLVLLDVEMPVMN 65 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G L ++ Q + VL L+ + + ++ GA G++ K D + + A++ ++G Sbjct: 66 GPEALAQMLDFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAIRQAVAG 125 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 E N + +S+ + L+ RE +LRY+ G+SNK IA ++ LS TV A Sbjct: 126 QQTVSPEM-NNAGQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFLSENTVKA 184 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYEL 209 H NI+ KL + + V YA+ L Sbjct: 185 HMQNIFRKLNIDNRVRAAVYARELGL 210 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 245 bits (627), Expect = 8e-64, Method: Composition-based stats. Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 6/195 (3%) Query: 22 LLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFTFLKRIKQIQSTVKVL 81 +LQ +L++V + ++ + D++IMDI LP G + IK+ +V+ Sbjct: 1 MLQSEPDLELVGEAGRGEEAVELTKALKPDVVIMDISLPDMSGIEATRLIKEAVPETRVI 60 Query: 82 FLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTFFPSETLNYI------ 135 L+ E + ++AGA+ ++ K + D+ A++ ++ G + Sbjct: 61 GLTMHEEEPFVLEFLRAGADAYIVKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEGYVS 120 Query: 136 KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHKSNIYGKLGLH 195 + + L+ RE IL + GL+N EIA +L +S KTV H+SN+ KLG+H Sbjct: 121 RPGRAVGQPEEPCPLTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKLGIH 180 Query: 196 SIVELIDYAKLYELI 210 EL+ YA L+ Sbjct: 181 DRTELVRYAIRQGLV 195 >UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria (class) RepID=D2AX12_STRRD Length = 239 Score = 245 bits (626), Expect = 9e-64, Method: Composition-based stats. Identities = 50/213 (23%), Positives = 98/213 (46%), Gaps = 6/213 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I+D P++R + ++L + ++V + ++ + R D+++MDI +P D Sbjct: 11 IRVLIVDDQPLVRRGLSLILSPDPSFEVVGEAENGAQAVTLARRLRPDVVVMDIRMPVLD 70 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + + +VL LS+ Y A++AGA GF+ K + D+ A++ + +G Sbjct: 71 GVGATRELAATVPDCRVLALSTFDLDEYVVGALRAGAYGFLPKDSSPEDLSAAIRTVHAG 130 Query: 124 YTFFPSETLNYIKSNKCSTN------SSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 L + S + + L+ REV + R + +GL N I+ L +S Sbjct: 131 EAAVAPRLLTRLISTYVRAPHGTRPTPTGLGELTPREVEVWRLMATGLDNTGISRTLDIS 190 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV + ++I+ KL + + + A L+ Sbjct: 191 LSTVKNYITSIFDKLAVRDRAQAVIVAYESGLV 223 >UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betaproteobacteria RepID=Q5NZX4_AZOSE Length = 211 Score = 245 bits (626), Expect = 9e-64, Method: Composition-based stats. Identities = 54/201 (26%), Positives = 107/201 (53%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V++ D H ++R +++ + ++++V + + + ++T ++++D+ +PG Sbjct: 2 IRVLVADDHFLVREGLKMTIAAMQDVEVVAEATNGGEVLAAIKTCNAHVLLLDMSMPGLS 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++R+K + +L LS E A + +Q+GA+G+V+K + + A++ + SG Sbjct: 62 GVDLVRRVKSEWPGLPILVLSMYGETQLAAKVLQSGASGYVTKGKGREILLSAIRKVASG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + + + I + +S L++RE ILR L +G S +IA++L +S KTVS Sbjct: 122 HRYIDPDLAEKILFDVRMPTASVQEQLTHRESQILRMLQAGKSVTQIANELSVSPKTVST 181 Query: 184 HKSNIYGKLGLHSIVELIDYA 204 HK KL + VEL+ YA Sbjct: 182 HKIRAMQKLHCQNNVELLKYA 202 >UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KCH2_PSEF5 Length = 208 Score = 245 bits (626), Expect = 9e-64, Method: Composition-based stats. Identities = 84/210 (40%), Positives = 127/210 (60%), Gaps = 2/210 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M SV+I+D HP++ +I L+ IV +T D ++ + + D++I+D+ L Sbjct: 1 MSK-SVLIVDDHPVVCEAIRKTLESQ-GYTIVGETADGISALNMILSLRPDIVILDVSLE 58 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 DG T LKRI Q V+VL +++S YA R +QAGA+GFVSK + AV I Sbjct: 59 KMDGLTVLKRIAQANLDVRVLVFTAQSVDTYAMRCLQAGASGFVSKNEPLTKLLKAVDTI 118 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 + GY FFP +++ + + +S + L+NRE+ +L+ L GL+N EIA+KL LSNKT Sbjct: 119 VEGYVFFPKKSMPFSDGGRGKHSSDVLAALTNRELEVLKLLAEGLTNLEIAEKLHLSNKT 178 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 VS HK NI KLG+ S+V+L++ A+ EL+ Sbjct: 179 VSGHKINILSKLGVTSVVDLVNIARQNELV 208 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 245 bits (626), Expect = 9e-64, Method: Composition-based stats. Identities = 49/210 (23%), Positives = 99/210 (47%), Gaps = 2/210 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M V+++D H ++R+ ++ L ++++V + D + D+++MD+ +P Sbjct: 1 MNTIRVMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALEVKPDVVVMDLVMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G + + +++ L+S + ++AGA G++ K + ++I A++ + Sbjct: 61 KMTGVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAIRKV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 G +E ++ +K + L+ RE IL L G N+ IAD+ +S KT Sbjct: 121 ALGEYAIETEVEKKVEHHK--RHPDLHDDLTAREREILTLLAKGYDNQRIADESFISLKT 178 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V H SNI KL + + + YA + L+ Sbjct: 179 VKTHVSNILSKLAVSDRTQAVVYAFQHGLV 208 >UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobacteria RepID=GACA_PSEU2 Length = 214 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 108/209 (51%), Gaps = 2/209 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D H ++R I +L LQ+V + D ++ R D+++MD+ +PG Sbjct: 2 IKVLVVDDHDLVRTGITRMLADIDGLQVVGQADSGEESLKKARELKPDVVLMDVKMPGIG 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +++ + +KV+ ++ E + R +QAGA G+++K ++ A++++ +G Sbjct: 62 GLEATRKMLRSHPDIKVVAVTVCEEDPFPTRLLQAGAAGYMTKGAGLAEMVQAIRLVFAG 121 Query: 124 YTFFPSETLNYIK--SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + + + S + N+S +LS RE+ I +V + I+DKL LS KTV Sbjct: 122 QRYISPQIAQQLALKSFQPQVNNSPFDLLSEREIQIALMIVGCQKVQTISDKLCLSPKTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 + ++ I+ KL + S VEL A + ++ Sbjct: 182 NTYRYRIFEKLSISSDVELALLAVRHGMV 210 >UniRef50_A7NP18 Two component transcriptional regulator, LuxR family n=12 Tax=Bacteria RepID=A7NP18_ROSCS Length = 222 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 1/209 (0%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P +++ D H + R + LL++ IV + R + D++++DI +P Sbjct: 5 PIRILLADDHRMFRQGLRELLERKGGFIIVGEASTGREVLAQAAALRPDIVLLDIQMPEI 64 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG +++ Q VKV+ L+ + + AI+AGA ++ K D +++ ++ + Sbjct: 65 DGVAVARQLAQTHPDVKVIMLTMYRQDQHLFEAIKAGARAYLLKDADADELIDVIERVHR 124 Query: 123 GYTFFPS-ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 G TL + + L+ RE IL L G N+ IA +L LS KTV Sbjct: 125 GEAALDPTVTLRVFDEFRRLSIDQDAEQLTERERDILTLLAEGHDNRTIAQRLFLSEKTV 184 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S I+ KLG+ + + A LI Sbjct: 185 GNRLSEIFQKLGVSNRTQAALVAVQRGLI 213 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 2/209 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D H ++RM + L+ +++++ + D + D+I+MD+ + G D Sbjct: 2 IRVLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVELSPDVILMDLVMEGMD 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G K+I + S K++ L+S + I+AGA ++ K + +I A++ G Sbjct: 62 GIEATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAASKG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSS--TVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 S+ + S + + L+ RE+ IL + G +NKEI ++L ++ KTV Sbjct: 122 EPKLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFITIKTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 H +NI KL + + YA L+ Sbjct: 182 KTHITNILSKLDVSDRTQAAVYAHRNHLV 210 >UniRef50_B4DAD9 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAD9_9BACT Length = 237 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 4/209 (1%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 ++ +D HP++ ++L+ +L I + + DL++MD++LPG Sbjct: 15 KYRLLFVDDHPVVLDGYSLMLKSQPDLDICGLATNAGDAVQLFEKEHPDLVVMDLNLPGR 74 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G +K + ++ + +VL S E YA R+++AGA G+V+K + A++ +L Sbjct: 75 SGLDLVKDLLALEPSARVLVCSMHDEMLYAERSLRAGAKGYVTKDCSAALLLTAIRRVLG 134 Query: 123 GYTFFPS----ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 G L + + S + LS+RE + G + KEI KL LS Sbjct: 135 GNIHVSERLAVRVLEAFAGARPRGSHSPLEKLSDREFEVFVLFGEGKTAKEIGAKLNLSP 194 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLY 207 KTVS H+ +I K+ + E+I A + Sbjct: 195 KTVSVHRDHIKQKMEFGTSAEMIRQAVRW 223 >UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM25_SORC5 Length = 233 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 3/212 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 + ++D HP++R L ++ +V + + + D++++D+++P Sbjct: 20 SKLHIYLIDDHPVVREGFARALSDEPDMVVVGQAGTAADALRETASCKPDVVLVDLNIPD 79 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG L ++ K+L LS + F A++AGA G++ K + ++ ++ I Sbjct: 80 RDGIELLGALRAQLPQAKLLVLSGYDDEFRVAEALRAGAQGYLVKTSKLEEVIEGIRRIA 139 Query: 122 SGYTFFPSETLNYIKSN---KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 +G S + S S + L+ RE +LR L +G+S +E A +L +S Sbjct: 140 TGGAPLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAARLTISP 199 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 KTV H+ IY KLG S VEL A LI Sbjct: 200 KTVETHRVRIYAKLGCKSAVELTRIAVRTGLI 231 >UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNZ3_9GAMM Length = 223 Score = 244 bits (624), Expect = 1e-63, Method: Composition-based stats. Identities = 56/220 (25%), Positives = 110/220 (50%), Gaps = 12/220 (5%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP- 60 P ++++D HP++R + LL + ++IV + D+ + + + D++IMD+++P Sbjct: 3 SPIKILLVDDHPLVRAGFQRLLISDESIEIVGEADNGQSACEMYASHMPDVVIMDLNMPS 62 Query: 61 -----GTD-----GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQ 110 G ++RI KVL L++ + + AGA GF++K Sbjct: 63 DANTEEMSNNLNGGLEAIRRIISHDPKAKVLVLTAMEIDPFPAHVVNAGAKGFLTKRCAP 122 Query: 111 NDIFHAVQMILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEI 170 +++ AV+ I +G + E I S + +++ L+ RE+ I L G + + Sbjct: 123 DELLEAVKAIHAGEEYITEEIRLRITEG-GSADGASLASLTKRELQIFSLLAEGRTVSIV 181 Query: 171 ADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 A+++ LS KTV AH++NI+ KL + + EL+ A + ++ Sbjct: 182 AEEMFLSPKTVHAHRTNIFRKLKISNNSELVHLAIRHNIV 221 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 1/208 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I D HP++R + +L+ +Q+V + D + I+ RT D+++MD+++PG + Sbjct: 2 IRVVIADDHPLLREGLRRILEFEEGIQVVCEVGDGQGAINVSRTLDFDILLMDLNMPGVN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + I++ T+ +L L+ + +Q G G++ K D + +++ + SG Sbjct: 62 GLEACRVIRRENETIGILVLTVDDSDEKVFQVLQLGVAGYLLKDVDPKTLIDSIRKVHSG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVT-VLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + + T LS+RE+ IL Y+V G SN+EI L +S KTV Sbjct: 122 QPILSPAVTGKLLGQLVHPTQNRDTCGLSDRELQILTYVVKGSSNREIGQALFISEKTVK 181 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 H S+I+ KL + + A +L+ Sbjct: 182 NHLSSIFRKLAVEDRTQAALKAVKLKLV 209 >UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ectothiorhodospiraceae RepID=B8GSX5_THISH Length = 220 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 58/211 (27%), Positives = 106/211 (50%), Gaps = 4/211 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNS---ELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 V+++D H ++RM I LL + + +Q+V + + + D+++MDI++P Sbjct: 2 IDVLLVDDHELVRMGIRGLLDERAAVTGIQVVGEAHSGEEALVEAKRLKPDVVLMDINMP 61 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G G +RI + Q +VKVL L++ E ++AGA+G+++K ++ A+Q Sbjct: 62 GIGGLVATRRIVEAQPSVKVLVLTAMDEGPVPRWVLEAGASGYLTKGCRIEEMIAAIQGA 121 Query: 121 LSGYTFFPSETLNYIK-SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 + G + ++ LS RE IL ++ G + + IA L +S K Sbjct: 122 MQGERHISPAVAQRLALGGLAKGQANPFDELSGRERQILLMILQGQTPQAIATALNISPK 181 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TVS +K + GKLG+ + ++L+ A + LI Sbjct: 182 TVSTYKCRVMGKLGISNDMQLVTLAAQHGLI 212 >UniRef50_C5T9P3 Two component transcriptional regulator, LuxR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9P3_ACIDE Length = 239 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P ++++D HP++R + + L+ + + + ++ D+++ DI +P Sbjct: 4 PIRILLVDDHPLVRDGVRMRLEATEHICVAGEAASVGESLPLAHALAPDIVLTDIRMPAA 63 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G ++ V+VL LS + Y RA+ GA G+V K + A++ + Sbjct: 64 SGIHLAAVFREQFPRVRVLVLSMHDDAEYVRRAVSLGARGYVLKDAPAQQLIEAIEAVHQ 123 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G +F + S+ L+ RE ++L+++ G SNKEIA + S +TV Sbjct: 124 GGCYFSPGLEQLLDDAGSVARSNR--SLTPREASVLQWVSEGRSNKEIAALMGTSVRTVE 181 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLY 207 H+ ++ KL + L+ YA + Sbjct: 182 THRLHLRRKLRIEGQAALMKYAVDH 206 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 5/212 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 + V++ D H I+R L+Q+ S + +V + D ++ D+++MDI +P Sbjct: 5 QMIKVLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSMKVHPDVVVMDIAMPR 64 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G K+IKQ+ T +L L++ Y ++AGA F+ K + A++ + Sbjct: 65 LNGIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAIRAVY 124 Query: 122 SGYTFFPSETLNYIKSN-----KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 +G + T + + S V L++RE+ +L+ G+SNK+IAD+L L Sbjct: 125 AGESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIADQLYL 184 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYE 208 SN+T+ H SNI+ KL + S E I Y Sbjct: 185 SNRTIQTHLSNIFKKLSVGSRTEAILYGLKRG 216 >UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0G6_SYNWW Length = 213 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 56/211 (26%), Positives = 108/211 (51%), Gaps = 2/211 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M V+I D H ++R + LL+ +S ++++ + D + I+ R D+IIMD+++P Sbjct: 1 MDKARVVIADDHVLVREGLRKLLELDSNIKVIDEVGDGQGAINIARKEKPDIIIMDVNMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 GTDG + IK+ +V+++ L+ ++AGA+ ++ K +++ + + Sbjct: 61 GTDGIVATRVIKRELPSVRIIALTVYEGEE-VVDMVKAGASAYILKDVAGSELVDTIHRV 119 Query: 121 LSGYTFFPSETLNYIKSN-KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 ++G N + + S N + L+ RE +L LV G +NKE+A+ + +S K Sbjct: 120 MNGEVVIYPRVANRLVRELRQSENRKSEIRLTKREKDVLTLLVKGNTNKEMAEVMFISEK 179 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H ++I+ KLG+ YA ++ Sbjct: 180 TVKNHLTSIFRKLGVKDRTHAAIYALKNRIV 210 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 5/210 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M VI+ D HP+ R ++ L++ + +V + D + D+ ++DI +P Sbjct: 1 MSKIRVILADDHPLTRQGLKAYLEREENVALVGEAADGDEAWKLIEELKPDVALLDIRMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G DG T +RIK+ + V + L+S Y +++AGA GFV K + A+Q + Sbjct: 61 GADGITLARRIKENKLPVAAIMLTSYDSQQYVLASLKAGAKGFVLKTTSAGALMKAIQTV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 +G F SE + + + + T + LS RE +L GLS+KE+A +L +S +T Sbjct: 121 ATGSLFLDSEVASVVGAQEELTEA-----LSPREREVLLCAARGLSSKEVAAQLYISERT 175 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V H +++Y KLG H+ E + A + L+ Sbjct: 176 VQTHLASVYDKLGAHNKTEAMLLALKHGLM 205 >UniRef50_A1VB77 Two component transcriptional regulator, LuxR family n=5 Tax=Desulfovibrio RepID=A1VB77_DESVV Length = 216 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 116/211 (54%), Gaps = 4/211 (1%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P +V+I++ I+R I+ LL N E IV + D + + D+++MD+ LP Sbjct: 2 PITVVIVEDLDIVREGIKALLDANGEFIIVGEASDGIEALRIVEKHAPDIVLMDLTLPVM 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +G ++ IK+ + T KVL L++ + R + AGA+G++ K ++ +F A+Q +L+ Sbjct: 62 EGAEAIREIKRRRETTKVLALTAHKKDSLIYRTLSAGADGYLLKNASRDILFQAMQTVLA 121 Query: 123 GYTFFPSETLNYIKSNKC----STNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 G + E + + + +S + +LS+RE +L+ + G NK +A+KL +S+ Sbjct: 122 GRRYISPEISDLLIDDFLRHGRRDEASMLDLLSDREKQVLKLVAEGHGNKAVAEKLCISH 181 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 KTV HK+N+ KLG S EL+ +A + L Sbjct: 182 KTVEKHKANLKRKLGTASTAELVTFAIEHGL 212 >UniRef50_Q027R2 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027R2_SOLUE Length = 247 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 55/222 (24%), Positives = 107/222 (48%), Gaps = 15/222 (6%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 +++ D HPI R + LL + ++V + D R +D L+ D++++D+ +PG Sbjct: 22 KIRIVVADDHPIFRDGLCRLLALEEDFEVVAQAQDGRQVLDVLQQHEPDILLLDLKMPGL 81 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG L+R++ ++ +V+ L++ + +A++ G +G V K + +++ + + Sbjct: 82 DGLATLQRLQIAKNKTRVIVLTASDDKNEFVQAMKLGTSGIVLKQTATELLIKSIRKVHA 141 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTV---------------TVLSNREVTILRYLVSGLSN 167 G + S T + + + + + LS RE I+ + G N Sbjct: 142 GEIWLDSHTTAAVIRQFVANDETPAMAAPSQAPPTRERERSPLSQREREIVALVAQGFKN 201 Query: 168 KEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 KE+A+K+ +S +TV H NI+ KLG+ +EL YA L Sbjct: 202 KEMAEKMFISEQTVKNHLHNIFDKLGVSDRLELALYAIHNNL 243 >UniRef50_D1VBH1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=D1VBH1_9ACTO Length = 248 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 9/218 (4%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 P V+I D ++R L++ +L +V + D + R D+++MDI +P Sbjct: 24 SPIRVLIADDEGLVRAGFRALVEATPDLTVVAEAADGVAAVRESRRLRPDVVLMDIRMPV 83 Query: 62 TDGFTFLKRIKQIQ--STVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 +G + I +L +++ + Y A++AGA GF+ K ++ A++ Sbjct: 84 MNGLEATRLIAADAVRPGPGILVVTTFDDDEYVFEALRAGAAGFILKDTQPENLLAAIRT 143 Query: 120 ILSGYTFFPSETLNYIKSNKCSTNSSTVTV-------LSNREVTILRYLVSGLSNKEIAD 172 + +G + + + + L++RE +L + +G SN EIA Sbjct: 144 VAAGDALLAPGVTRRLIAAFVRVPAPPASPLTGLASTLTDRERAVLTQIANGYSNAEIAQ 203 Query: 173 KLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 L +S TV H ++ KL +L+ A L+ Sbjct: 204 ALYVSVSTVKTHVGHLLAKLAARDRAQLVIAAYESGLV 241 >UniRef50_B3PFS2 GacA n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PFS2_CELJU Length = 217 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 101/210 (48%), Gaps = 3/210 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 T ++++D H ++RM I +L Q+V + R D+++MD+ +PG Sbjct: 2 TKILVVDDHDLVRMGIVRMLADIDGYQVVGDAKSGEEAVTKARILKPDVVLMDVKMPGMG 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G K++ + +K++ +++ + Y R +QAGA G+V+K D +I A+ + G Sbjct: 62 GLEATKKLLTVNPAIKIIAVTACDDDLYPTRLMQAGAVGYVTKGADFTEITDAINKVTRG 121 Query: 124 YTFFPSETLNYIKSNKCST---NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 + + + S S LS RE+ + +G +IA+ +S KT Sbjct: 122 DLYMSNSIAQQLALRTFSGANNQESPFEKLSQRELQTAMLIANGQKVNDIANTFCVSPKT 181 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V++++ I+ KL ++S VEL A + L+ Sbjct: 182 VNSYRYRIFEKLDINSDVELTLLAVKHNLL 211 >UniRef50_C1SMK1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMK1_9BACT Length = 219 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 64/211 (30%), Positives = 114/211 (54%), Gaps = 4/211 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MK SV I+D H ++R + +++ + +++++ DD + + L D+II+D+ L Sbjct: 1 MKNYSVFIIDDHAVVREGLAMVINQEADMEVCGSADDGPVALQKLFNIEPDIIIVDLSLT 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 +DG +K IK + +L LS + E +A R ++AGA+G+V K + I A++ I Sbjct: 61 TSDGLEVIKAIKARYPNIFILVLSMREEMVFAERCVRAGASGYVMKSEKPSVIIEALRKI 120 Query: 121 LSGYTFFPSETLNYIKSNKCS----TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 + G +F + YI + + + V L++RE + + + +G + K+IA KL L Sbjct: 121 IKGKIYFSEKMTEYILNKAMNVKNCEDKDVVEALTDREFQVFQMIGNGFTTKQIATKLNL 180 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLY 207 S KT+ A + ++ KLGL S EL YA + Sbjct: 181 SVKTIDAFRESMKHKLGLKSAPELSQYAIKW 211 >UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family protein n=2 Tax=Neptuniibacter caesariensis RepID=Q2BNR9_9GAMM Length = 214 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 52/206 (25%), Positives = 98/206 (47%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 ++I D H ++R LL VL+ + ++ D++IMD+++ G G Sbjct: 2 KIVIADDHAVVRQGYASLLSAMLAPCEVLEAGNGDQAYSLCQSDSPDVVIMDVNMQGISG 61 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 +RI Q + ++LF S E +A++AGA G+++K + AV+ + +G Sbjct: 62 IEATRRILQKKPDTRILFFSMYDEIPVVTQALEAGAKGYITKSCTPEILIEAVKKVSAGQ 121 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 + E + ++ + ++ RE I L G + KEI+++L +S+KTVS + Sbjct: 122 LYVEHELAMRLAVSRPEQKDKRLKEMTQREFEIFVMLAQGSNVKEISEQLCISSKTVSNY 181 Query: 185 KSNIYGKLGLHSIVELIDYAKLYELI 210 + + KL + S EL+ A L+ Sbjct: 182 TAILKSKLNIGSTAELVHLAIETGLV 207 >UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacillales RepID=C0ZDE8_BREBN Length = 214 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 117/207 (56%), Gaps = 2/207 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP-GT 62 V+++D H +IR + VLL+ S+++IV ++ I D+++MD+ LP G Sbjct: 2 IRVLLVDDHTMIRKGLRVLLESYSQIKIVGESHTGNDAILKANQLKPDVVLMDLSLPNGL 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DGFT K I++ VK++ L+ E + AI GA+G++ K + +F A+ + Sbjct: 62 DGFTASKEIRKSNPLVKIVILTMHDEEIFVQEAITVGAHGYILKNSHGELLFQAIVEVYR 121 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTV-TVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 G F+ + I + +++ T+ +VL+ RE ++R +V G SNKE+ADKLL+S KTV Sbjct: 122 GKCFYKTSVSQEIINLWLRSDAKTLPSVLTLREKELVRLIVLGYSNKEMADKLLISVKTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYE 208 HK+NI KLGL S +LI YA Sbjct: 182 ENHKTNIMQKLGLDSKHQLIQYAIKNR 208 >UniRef50_Q5NZZ3 Two-component system response regulator n=3 Tax=Betaproteobacteria RepID=Q5NZZ3_AZOSE Length = 210 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 53/208 (25%), Positives = 105/208 (50%), Gaps = 1/208 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++I+D H I R + +L +++ + + D + +R+ D+I+MDI++ G Sbjct: 2 IELLIVDDHTIFRSGLRRMLSDEADMHVADEASDGASALAKIRSGKFDVILMDINMAGRS 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G L+ ++ + + V+ LS E YA A++A AN ++SK + ++ A++ ++ G Sbjct: 62 GLDTLESLRAERPELPVIMLSMYPEEQYAVLALRARANAYLSKDVEPQELLAAIRHVVGG 121 Query: 124 YTFFPSE-TLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + N + + + L+ RE+ ++ +V G+S ++ ++ LS KTVS Sbjct: 122 GRYVSPRSAANLLMQMDRAREGAPHEKLTAREMQVMMKIVRGMSLTDVGVQMCLSVKTVS 181 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 ++ I KL L S EL+ YA L+ Sbjct: 182 TYRMRILEKLSLSSNAELVQYAMRNGLL 209 >UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 Tax=Vibrio RepID=C9QDP7_VIBOR Length = 209 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 51/207 (24%), Positives = 97/207 (46%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +I+ D H +++ ++ L++ L I+ ++ D++++DI++P + Sbjct: 2 IRLILADDHRLMQDGLKSRLEREDNLDIIACVGTGTEALEATLELKPDVLLLDINMPNLN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G L+++ + S V+ LS Y R+++AGA G+V K ++ A+ + G Sbjct: 62 GIEVLEQLAKTSSATSVIMLSMHDSRDYVVRSVKAGAKGYVLKDVGSEELVMAINQVAQG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 ++ + + + LS RE +L+ + +G NKEIAD L +S +TV Sbjct: 122 RSYLCPQASDRLLEQINEAPEEKDDTLSKRESDVLKAIANGAGNKEIADSLHISVRTVET 181 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H+ I KLG S L+ A L+ Sbjct: 182 HRLRIKKKLGATSTAALVKLALQKGLV 208 >UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae RepID=B9E7V9_MACCJ Length = 210 Score = 243 bits (621), Expect = 3e-63, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 111/211 (52%), Gaps = 3/211 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRP-VDLIIMDIDL 59 MK +I++D H I+R ++ LL + ++ ++ R +++L DLIIMD+ + Sbjct: 1 MKRMDIILVDDHHIVRQGMKFLLSTEASFNVIADFNNGRELLEHLDETQLPDLIIMDLVM 60 Query: 60 PGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 P +G +RIK VKVL LSS + + + AGA+G+ K ++ + + ++ Sbjct: 61 PELNGIEATRRIKAKYPDVKVLVLSSFIDEEHVLGVMDAGADGYEMKDSEPKALINTIKQ 120 Query: 120 ILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 I +G F + + KS + LS RE+ +L+ + GL+NKEIA+KL +S K Sbjct: 121 IAAGEQIFHPDVMKVRKSGMNLAHLRN--PLSKRELEVLKAMSEGLTNKEIAEKLFVSEK 178 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H S+I+ KL + + Y Y+LI Sbjct: 179 TVKTHVSHIFAKLEVGDRTQASMYGVKYKLI 209 >UniRef50_A9AZR3 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZR3_HERA2 Length = 213 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 56/205 (27%), Positives = 107/205 (52%), Gaps = 1/205 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++++D H I+R + LL +++E IV + + I+ +I+MD+ +P D Sbjct: 5 IRIMLVDDHAIVREGLRTLLAEDTEFLIVGEAQNGADAIELAAVVRPHVILMDLVMPNVD 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + ++ + + +++ L+S S+ + +AIQAGA+G++ K + ++F A++ + +G Sbjct: 65 GIQATQALQSLMPSSRIIVLTSFSDDQWVSKAIQAGASGYLLKNVLKAELFLAIRTVANG 124 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 F +E + + S + L+ RE ++L +V GLSNKEIA L L+ TV Sbjct: 125 QPFLHAE-AQRTLMRQSTAPPSLLPSLTERERSVLDGIVGGLSNKEIARSLHLTEGTVKG 183 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYE 208 + S I KL + + YA + Sbjct: 184 YVSTILTKLAVADRTQAALYAIKHG 208 >UniRef50_Q0A525 Two component transcriptional regulator, LuxR family n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A525_ALHEH Length = 214 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 4/208 (1%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P +++++D H ++R LL++ S V + D D+++MDI LPG Sbjct: 9 PLTLLLVDDHAVVRAGYRRLLEQASRCWQVTEADSGESAYRACARERFDVVVMDISLPGI 68 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G L R+++ ++VL S E +A +A+ GA G+++K + + AVQ I + Sbjct: 69 SGLETLARLQRRAPEIRVLIFSMHEEPVFAEQALSGGAAGYITKSSAPEVLVEAVQRIAA 128 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G + + + +++ + LS RE I R L G + EIA L +S KTV+ Sbjct: 129 GGHYLGPDV----RCRHGDADTAGLQSLSAREFEIFRLLAEGCGSAEIARLLNISYKTVA 184 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 + S I KL L+++ E+ A +I Sbjct: 185 NYGSGIREKLALNNVAEMTRLAIRAGVI 212 >UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ84_DESAH Length = 218 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 112/213 (52%), Gaps = 4/213 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 P +++++D H I+R S++ L++ ++++ + + +++IMDI++P Sbjct: 4 NPITILLVDDHDILRQSLKKALEEKPNVKVLQGACNGLDAVRLTEKHCPNIVIMDINMPD 63 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G K+I +K++ LS + F IQAGA GF+ K + D+ A+ M+ Sbjct: 64 LNGIEAAKQIISKNPDIKIIALSMLCDEFNVKSMIQAGAKGFLLKTSSLEDLHTAILMVA 123 Query: 122 SGYTFFPSETLNYIKSNKCSTNSS----TVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 SG ++ E LN + + + + + L+ RE +++ + G +++EI++KL +S Sbjct: 124 SGKSYLCPEALNIMMEDIQTPGDTKLLCPLQRLTLRERGVIQLIAEGYTSQEISEKLNIS 183 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +TV H++N KL +H+I L +A LI Sbjct: 184 KRTVDVHRTNTMNKLKIHTIAGLTRFAVKEGLI 216 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 49/209 (23%), Positives = 97/209 (46%), Gaps = 3/209 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 S++I++ ++R + +L +++V + D + D+I+MD+ +P + Sbjct: 6 ISILIVEDQTLMRQGLRTILDLEESIRVVGEARDGAEGVREALRLRPDIILMDVQMPVMN 65 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++ I S +++ L++ Y ++++AGA G++ K + ++ + +G Sbjct: 66 GVEAIRAIIAAWSQARIIVLTTFDRDDYVFQSVRAGAMGYLLKDAPAEALLQTIRRVHAG 125 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTV---LSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 F E + + T+ LS RE +L L GLSN+EIA +L ++ T Sbjct: 126 EVFIQPEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSNREIAGRLSITEGT 185 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 V H SNI KL + + + A+ L Sbjct: 186 VKNHVSNILAKLQAENRTQAANIARREGL 214 >UniRef50_A1TVD4 Two component transcriptional regulator, LuxR family n=9 Tax=Burkholderiales RepID=A1TVD4_ACIAC Length = 209 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 1/208 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V++ D H ++R I L + ++Q+ + Y + LR P D++++D+++PG Sbjct: 2 IHVVLCDDHAVLRRGIRDTLTEAPDIQVTGEAGGYSELREILRKAPCDVLLLDLNMPGRS 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G L +K+ S +KVL +S E YA R ++AGA G+ +K D ++ AV+ ++ G Sbjct: 62 GLEVLSSLKETDSAIKVLVVSMYPEDQYALRCLRAGAQGYANKAGDPMELIEAVRTVMKG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSS-TVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + E + + LS RE+ L + SG +IA++L+LS KTVS Sbjct: 122 RKYLTPEVAQMLADSLAQPAPELPHEALSERELQTLVKIASGKRLSDIAEELMLSPKTVS 181 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 ++S + KL L + EL YA +L+ Sbjct: 182 VYRSRVLEKLKLSNNAELTVYAIRNQLV 209 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 6/207 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D HP +R+ + L++ + +V + D I+ D+++MD+ +PG Sbjct: 20 IRVLVVDDHPPMRVGLVALIRSQPGMDVVAEASDGEEAIEIYDDLQPDVVLMDLRMPGMG 79 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + I++ +V+ LS+ RA+Q+GA ++ K +I V+ + +G Sbjct: 80 GVEAILAIRKKAPEARVIVLSTYDWDEDIHRALQSGAKSYLLKDMPIEEIASTVRAVYAG 139 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 T P + T + L+ RE +L L+ G SNKEIA L +S TV + Sbjct: 140 DTSLPRSVAERL------TERAQREQLTERERDVLESLIKGRSNKEIASSLCISEDTVKS 193 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H ++ KL + A + ++ Sbjct: 194 HLKTLFAKLRVRDRTGAAIEAIRHGIV 220 >UniRef50_UPI00017452CB response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017452CB Length = 235 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 51/209 (24%), Positives = 97/209 (46%), Gaps = 4/209 (1%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 + +D H ++R ++ L++ +L + + + L D++ +DI LPG Sbjct: 18 KKKIAFVDDHTMLRDGLQKLVESQPDLCCYWTASNTQDALQQLEQGKPDMLAVDISLPGR 77 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +G +K + + +L +S E FYA R ++AGA G+V K + + A++ +L Sbjct: 78 NGLELIKDALALHPDLPILVISMHDESFYAQRVLKAGARGYVMKDAESTTLLQAIRNVLE 137 Query: 123 GYTFFPS----ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 G + + + + V LS+RE + + + G S ++I D L +S Sbjct: 138 GGRYVSPAMSAQIMEAFSGRGAARPVDGVQRLSDREFEVFQLISEGKSTQQIGDALNISV 197 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLY 207 KTV H+++I KL L ++ YA + Sbjct: 198 KTVEVHRAHIREKLKLEDGASVLRYAVRW 226 >UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteroidetes RepID=A5FAZ3_FLAJ1 Length = 219 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 58/215 (26%), Positives = 113/215 (52%), Gaps = 8/215 (3%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V++ D H +R I+ LL+ + +++V + D ++ + DL+I+DI +P Sbjct: 5 IRVVLADDHVFVRDGIKSLLENEANIEVVGEAIDGADALEVVTATKPDLLIVDIRMPNLT 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +++++ + VK++ LS Y ++I+AGA+G++ K + + + A+ + SG Sbjct: 65 GIEVVEKLRSENNNVKIIMLSMHESEEYVLKSIKAGADGYLLKGSSKEEFLKALHAVSSG 124 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTV--------LSNREVTILRYLVSGLSNKEIADKLL 175 +F + + + S ++ +S ++ RE IL L+SG NKEIA+ L Sbjct: 125 GKYFSGDISSILISQLTNSTASLEPKQTLGEEMMITKREKEILTLLLSGKGNKEIAEALE 184 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S +T H+ N+ KL + +++EL + A Y LI Sbjct: 185 ISKRTAEVHRFNLMKKLKVKNLMELSNKAAEYSLI 219 >UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microscilla marina ATCC 23134 RepID=A1ZEE6_9SPHI Length = 213 Score = 242 bits (620), Expect = 4e-63, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 117/212 (55%), Gaps = 5/212 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITID-YLRTRPVDLIIMDIDLPGT 62 + I++ H I+R ++ LL K +E++++ + +D + D+++ DI+LPG Sbjct: 2 ITFYIVEDHTIVRQGLKQLLAKYAEMKVLAEFGVPDQIMDNLAKGERPDIVLCDINLPGM 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG ++IKQ K++ L+ + FY +A AGA+G+ K +++++ ++ I + Sbjct: 62 DGLALTEKIKQKYPDQKIIILTMHQKEFYVLKAFDAGADGYFHKDTEESELIMGIKKIYN 121 Query: 123 GYTFFPSET----LNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 G +F +N + K S+ + + L+ RE +L +V+GL N+EI DKL +S Sbjct: 122 GQKYFCQSVSQILINRLLDTKNSSGKTLLPTLTFREKEVLEQVVAGLGNREIGDKLCIST 181 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +TV H++NI K GL + VEL+ +A L+ Sbjct: 182 RTVENHRANILRKFGLKNTVELVKFAIENSLV 213 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 242 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 52/218 (23%), Positives = 107/218 (49%), Gaps = 11/218 (5%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +++ D H ++R I+ +L +L++V + +D + + D++++DI++PG Sbjct: 3 IRILLADDHALLRQGIKRVLNFEDDLEVVGEAEDGQEALARTLMLKPDILLLDINMPGLT 62 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G K++KQ +S VK++ L+ Y ++ GA G++ K + N + A+ M+ G Sbjct: 63 GLDVAKQLKQARSRVKIIALTIHDSDNYVLELLKNGALGYLLKDVEPNVLIKAIHMVNEG 122 Query: 124 YTFFPSETLNYI-----------KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIAD 172 F + + + K + S L+ RE+ +L + GLSN++I Sbjct: 123 NPFVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSNQDIGK 182 Query: 173 KLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 L LS KTV H ++++ KL ++ + + Y +++ Sbjct: 183 ALGLSEKTVKNHLTSVFHKLKVNDRTQALVYVLKNKIV 220 >UniRef50_C6C961 Two component transcriptional regulator, LuxR family n=24 Tax=Gammaproteobacteria RepID=C6C961_DICDC Length = 211 Score = 242 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 59/210 (28%), Positives = 112/210 (53%), Gaps = 2/210 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M +V ++D H ++R LL ++Q+V + L VD+ +MDI +P Sbjct: 1 MVMINVALIDDHIVVRSGFAQLLSLEGDIQVVGQYASAADAGVSLLKLNVDVAVMDIAMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G + L R++Q + T + + LS + A+ AGA G+++K ++ AV+ + Sbjct: 61 DESGLSLLARLRQKRPTFRAIILSIYDTAAFVQSALDAGACGYLTKRCGPEELVQAVRAV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 +G ++ ++ + ++ ++ + + L+ RE I LV+GLS K IA++L LS+KT Sbjct: 121 HAGGSYLCADAMRALRHSRQRPKA--LEALTPREREIFDLLVNGLSVKTIAEQLDLSHKT 178 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V H++N+ KL + VEL+ +A ++L+ Sbjct: 179 VHVHRANVLDKLHCATTVELVHFALQHQLL 208 >UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 Tax=Bacillales RepID=C0Z7M8_BREBN Length = 602 Score = 242 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 57/220 (25%), Positives = 109/220 (49%), Gaps = 13/220 (5%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++I+D H IR S+ +L+ +L++V +D ++ DL++MD+++P D Sbjct: 383 IRLVIVDDHSFIRESLRSILEGQRDLRVVGLAEDGAQAVELCEELEPDLVLMDLEMPNMD 442 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G T KRIK+ +++L LS+ + A +++GA+G++ K + ++ ++++ G Sbjct: 443 GITATKRIKEKWPGIRILVLSTFQDTEKAKEIMRSGADGYLLKSIESRELAETIRLVHRG 502 Query: 124 YTFFPSETL-------------NYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEI 170 T + + + + K S L+ RE IL+ L G+ K I Sbjct: 503 GTMIAQDLFHKMLDGQPVNGQEDLLVAPKQSEKDENAYGLTKREQEILQMLAQGMRYKTI 562 Query: 171 ADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 A KL LS+ TV + S +Y KLG+ + + + K+ L+ Sbjct: 563 ASKLYLSDGTVRNYASALYDKLGVRNRDDAVQKGKMEGLV 602 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 242 bits (619), Expect = 5e-63, Method: Composition-based stats. Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 3/209 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I D H ++R + L+ +++ + D + D+I++D+ +PG D Sbjct: 8 IRVLIADDHRMVRQGLRTFLELQEGIEVAGEAADGAECAERAAELEPDVILLDLVMPGVD 67 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++ +++ ST +VL ++S ++ AI+AGA G+V K D + AV+ + +G Sbjct: 68 GVGAMELLREAGSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAVRSVHAG 127 Query: 124 YTFFPSETLNYIK---SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 + E + SN + L+ RE +L + G +N+EIA L+L+ KT Sbjct: 128 HVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARALVLAEKT 187 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 V H SNI KLG+ + +A + + Sbjct: 188 VKTHVSNILMKLGVADRTQAALWAVRHGI 216 >UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacillus RepID=C3BET8_9BACI Length = 216 Score = 242 bits (619), Expect = 5e-63, Method: Composition-based stats. Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 9/212 (4%) Query: 7 IIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFT 66 +I+D +IR + +LL SEL++V +D + ++I+MDI +P +G Sbjct: 1 MIVDDQSLIRDGLAMLLNLRSELEVVGTANDGDEVVRIAEQLQPEIILMDIRMPRINGVE 60 Query: 67 FLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTF 126 + I++ +KVL L++ ++ A++ GA+G++ K + + I A+ + +G Sbjct: 61 GTRLIRERFPDMKVLMLTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHAGGAV 120 Query: 127 FPSETLNYIKSNKCST---------NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 P + I T V L+ RE+ +LR + GL+NKEIA+KL ++ Sbjct: 121 LPQDITAQIVKELKRTKVVEISGQNQPKQVEQLTEREIDVLREIGLGLNNKEIAEKLFIT 180 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 TV H SN+ KL L + YA Y + Sbjct: 181 EGTVKNHVSNLISKLELRDRTQAAIYAVRYGI 212 >UniRef50_B4DA09 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DA09_9BACT Length = 249 Score = 242 bits (619), Expect = 5e-63, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 5/211 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +P V+++D HP++R + + +L + + + + DL ++D+ LP Sbjct: 16 RPWKVLLVDDHPVVRDGLAQRIALEPDLSVCAACESVSRALREVTVHHPDLAVVDLSLPS 75 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G +K I V++L S E Y RA+ +GA G+V K +++ A++ +L Sbjct: 76 GHGLDLIKEIHARYPEVRLLVFSMHDEQTYGERALLSGAQGYVMKDESPDEVLAAIRKVL 135 Query: 122 SGYTFFPSETLNYIKSNKCSTNSS-----TVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 SG + + ST + + LSNRE+ +L ++ G S K IA +L Sbjct: 136 SGRISISAHLSARLAEAAASTRGTRARKLPMDRLSNRELEVLEWMGQGKSVKAIAQRLER 195 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLY 207 S KT+ ++ + KL + S ELI +A + Sbjct: 196 SAKTIETYRQRLKEKLNIESNSELIAHAARW 226 >UniRef50_C6DD36 Two component transcriptional regulator, LuxR family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6DD36_PECCP Length = 218 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 113/207 (54%), Gaps = 2/207 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +V ++D H ++R LL +++Q+V + +L +P+D+ ++DI +P Sbjct: 11 INVALVDDHIVVRSGFAQLLALENDIQVVGQYASAAQAWPHLLKQPIDVAVIDIAMPDES 70 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + L R++Q + + + LS + A+ AGA G+++K ++ AV+++ SG Sbjct: 71 GLSLLTRLRQQRPQFRAIILSIYDTTAFVQSALDAGAGGYLTKRCGPEELVQAVRVVSSG 130 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + ++ L+ I+ + + L+ RE I L++G+S K IA++L LS+KTV Sbjct: 131 GIYLCADALHAIRHQQQPPKE--LLALTPREREIFSLLINGISVKSIAEQLELSHKTVHV 188 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H++NI KL S VEL+ +A ++L+ Sbjct: 189 HRANILSKLQCESTVELVHFALQHQLL 215 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 7/215 (3%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRP------VDLIIM 55 + V+++D H I+R + L+ +L++V + D + +D L R +++M Sbjct: 9 ETVRVMVVDDHAIVRRGLRAYLETVPDLRLVSEAADGQEAVDLLNERHVVGDPMPHVVLM 68 Query: 56 DIDLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFH 115 D+ +P DG + I VKV+ L+S SE A+ AGA G+V K + ++ Sbjct: 69 DLQMPRLDGIEATRSILASYPDVKVVVLTSFSEAERVHAALSAGAAGYVLKDAEPEEVAT 128 Query: 116 AVQMILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 AV+ + G + + S VT L+ RE IL + GLSN+EIAD+L+ Sbjct: 129 AVRAAVKGEVHLDAAVARLLARRMASPQVG-VTSLTARERDILVLVGQGLSNREIADRLV 187 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S +T H SN+ KL L S + A L+ Sbjct: 188 ISERTARTHVSNVLSKLQLSSRTQAALLAIREGLV 222 >UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paenibacillaceae RepID=C0ZBD9_BREBN Length = 215 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 3/213 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M V+I D HP+ RM+I LL + +++ + + DL++MDI++P Sbjct: 1 MNAYRVLIADDHPMARMAIRSLLDPDPSFEVIGEAQNGEEAFLLCGQIQPDLVLMDINMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G + +K+ +KV+ LS + AIQ GA G++ K + +D + + + Sbjct: 61 KWSGLEATREVKKAYPHIKVVILSVSDDVADLITAIQFGAQGYLLKNLEPDDWINYLHAL 120 Query: 121 LSGYTFFPSETLNYIK---SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 L + E + + +T+ VL+ RE I+ Y+ +G +N+EI++ L+++ Sbjct: 121 LGEDSELTREMATRLMYRFRQEEATDEMVPAVLTPREREIVMYVGAGKTNREISEALIIA 180 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H NI KL L + V+L YA + L+ Sbjct: 181 ENTVKNHLKNILEKLQLANRVQLAAYAVRHHLV 213 >UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN7_9BACT Length = 220 Score = 242 bits (618), Expect = 8e-63, Method: Composition-based stats. Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 9/216 (4%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +++ D + ++ LL + L+IV + + + ++ R +++MD+++P D Sbjct: 5 IQIVLADDQALFLEGLKTLLSLDDSLEIVGECHNGQEALEACRRLRPQIVLMDLNMPVMD 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G K IKQ V VL L++ + A++AG++G++ K + A++ + SG Sbjct: 65 GVAATKAIKQELPEVNVLTLTTFDDDERVFEALKAGSSGYLLKDTPSKQLVEAIRAVSSG 124 Query: 124 YTFFPSETLNYIKSNKCSTNSSTV---------TVLSNREVTILRYLVSGLSNKEIADKL 174 +F + + + + LS RE +L +L G SNKEIA L Sbjct: 125 ESFLQPSIASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNKEIASHL 184 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 L+ TV H SN+ GKLG+ + A+ L+ Sbjct: 185 DLAEGTVKNHVSNVLGKLGVLDRTQAALMARDLGLV 220 >UniRef50_Q39C19 Two component transcriptional regulator, LuxR family n=60 Tax=Betaproteobacteria RepID=Q39C19_BURS3 Length = 271 Score = 242 bits (618), Expect = 8e-63, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 1/207 (0%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 +++++D H I+R I LL + V + ++ + + + D+I++DI LP T+G Sbjct: 4 NILLVDDHAIVRQGIRQLLIDRGVARDVTEAENGGDAVAAVDKQEFDVILLDISLPDTNG 63 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 LKR+K+ VL S E YA RA++AGA G++SK + + A+Q + +G Sbjct: 64 IEVLKRLKRKLPRTPVLMFSMYREDQYAVRALKAGAAGYLSKTVNAAQMIGAIQQVAAGR 123 Query: 125 TFFPSETLNYIKSNKCSTNSS-TVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + + N LS+RE L L SG +IA+ L LS KTVS Sbjct: 124 KYVSPAMAEALAEYVSFENEPLPHEKLSDREYQTLCMLASGKRLTDIANTLSLSVKTVSV 183 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 ++S + K+ L + EL Y L+ Sbjct: 184 YRSRLLEKMRLSNNAELTFYVMSNRLV 210 >UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridium RepID=C5RGJ7_CLOCL Length = 220 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 58/212 (27%), Positives = 106/212 (50%), Gaps = 12/212 (5%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +VII D I+R I+++L E+ ++ + ++ I+ L+ D+I+MD+ +P D Sbjct: 2 INVIIADDQKIVREGIKMILSLYDEINVIGEAENGEELINLLQNFMADVILMDVRMPIID 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G K IK+ KV+ L++ +E Y +AI+ GA+G++ K I +A++ + +G Sbjct: 62 GVEATKIIKERYIHTKVIILTTFNEDEYIFKAIKNGADGYLLKDVGSEFIINAIRSVYNG 121 Query: 124 YTFFPSETLNYIK------------SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIA 171 E + SN+ ++ + L+ RE+ + + + G SNK+I Sbjct: 122 AMLLDPEVTVKVVKAFNSITNESKNSNEFDNINNKLNSLTPREIDVAKLVAQGKSNKDIC 181 Query: 172 DKLLLSNKTVSAHKSNIYGKLGLHSIVELIDY 203 L L+ TV + + I GKL L+S EL + Sbjct: 182 RSLFLTEGTVKNYVTRILGKLELNSRTELAVF 213 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 52/216 (24%), Positives = 104/216 (48%), Gaps = 10/216 (4%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I+D +IR I LL + +++++V + + R ++ + + D+++MD+ +P D Sbjct: 3 IRVLIVDDQALIRTGIATLLSRKADIEVVGQAGNGREALELVASLDPDVVLMDVMMPVMD 62 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +++ + V+ L++ + ++I AGA G++ K D + +++ + G Sbjct: 63 GVEATRKLAERGPRPAVIMLTTFHDDERVLQSIAAGARGYLLKDVDHRVLADSIRTVAGG 122 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTV----------LSNREVTILRYLVSGLSNKEIADK 173 + + + S + VT L+ RE ILR L G +N+EI ++ Sbjct: 123 GALIHPQIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLLAQGYTNQEIGEQ 182 Query: 174 LLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 L LS TV H S I+ KL + + +A+ + L Sbjct: 183 LALSVGTVKNHLSVIFAKLAVRDRTQAALWAREHLL 218 >UniRef50_C1TL94 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL94_9BACT Length = 215 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 4/211 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +II D H + + +L + +L ++ + ++ D+++MD+ +P + Sbjct: 2 IPLIIADDHELFLEGVRDILSREDDLDVLALARTGQEALELTLQHHPDVVVMDVTMPKMN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +RIK VK+L LS ++ ++AGA+G+ K ++ A+ ++ SG Sbjct: 62 GIEASRRIKSSLGDVKILALSMHADKRLIAEILKAGASGYALKEGSSEELIRAIHIVSSG 121 Query: 124 YTFFPSETLNYIKSNKC----STNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 T+ + + + + + S ++LS+RE +L L G S KE+A L +S Sbjct: 122 ETYLSPKIASILIKDYLKLLDTAVPSRASLLSDREREVLALLAKGSSTKEVASSLHISKN 181 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H+ I KL +I ELI +A LI Sbjct: 182 TVDTHRRRIMEKLDCGNIAELIRFAIREGLI 212 >UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID=C0WKL5_9CORY Length = 253 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 51/234 (21%), Positives = 100/234 (42%), Gaps = 25/234 (10%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +P + ++D P++R +L+ ++ +V + D +D R PVD+I+MD+ + Sbjct: 9 EPIRIALVDDQPLLRAGFAMLIGSQEDMSVVWQASDGDEVLDLARQEPVDIILMDVQMAR 68 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G + + KV+ L++ + + AI AGA+GF+ K + ++ A++ + Sbjct: 69 VNGIAATEEVLPEFPDTKVIMLTTFDDHNFVHGAISAGASGFLLKDVEPEELLSAIRTVH 128 Query: 122 SGYTFFPSETLNYIKSNKCSTN-------------------------SSTVTVLSNREVT 156 SG + S + L+ RE+ Sbjct: 129 SGEAVLSPRITAQVLQQVRSEEGGDSRKAHSASHTAAAAQPGATTATAPPSAELTPREMD 188 Query: 157 ILRYLVSGLSNKEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 ILR + G SN EI+++ +S TV H ++ K G V+ + YA + ++ Sbjct: 189 ILRLMALGYSNTEISEEEFVSMATVKTHVRHVLTKTGSRDRVQAVLYAYTHGVV 242 >UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ASJ5_PELPD Length = 208 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 53/206 (25%), Positives = 103/206 (50%), Gaps = 4/206 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++I D H I+R + ++L+ S + + + D R + D+++MDI +P + Sbjct: 3 VRILIADDHAIVREGLTMILES-SGMIVAGEARDGRDALSQTEVLRPDVVVMDIAMPELN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + I VKV+ LS + + RA+QAGA ++ K + + + AV+ ++ G Sbjct: 62 GIDATRMIHGRLPEVKVIVLSMHNTREHVFRAMQAGARAYLLKESAGSGLVDAVRAVIRG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 +F + S + LS RE +++ +V G ++ EIA+ L LS K++ Sbjct: 122 ECYFGEGVD---APQAVAGFKSPLDSLSLREREVIQLVVEGRTSAEIAELLSLSPKSIET 178 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYEL 209 ++S + KLG+ +I L+ +A + + Sbjct: 179 YRSRLMVKLGVGNIPALVKFALQHGI 204 >UniRef50_B8ET67 Two component transcriptional regulator, LuxR family n=12 Tax=Proteobacteria RepID=B8ET67_METSB Length = 223 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 105/206 (50%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 +++++D H I+R LLQ+ L++V + D + DL+IMD+ +PG G Sbjct: 6 TILLVDDHAIVREGYRALLQQQPRLKVVAEAGDGAEAYRLFKQVKPDLVIMDLTMPGLGG 65 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 +KRI+Q ++L + +A +AI+AGA G+V+K + + +L G Sbjct: 66 VEAVKRIRQWDPAARILVFTMHQNAAFAVQAIRAGAKGYVTKSSPPEALIRGAFDVLQGR 125 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 ++ + + ++ + + VL+ RE ILR L++ S + IA L LS KTV+ Sbjct: 126 IALSADIDHELALSRVTETPTATDVLTPREFEILRLLLAEKSTEAIAAILGLSPKTVANT 185 Query: 185 KSNIYGKLGLHSIVELIDYAKLYELI 210 + I KLG+ S +EL+ A ++ Sbjct: 186 RYLIKAKLGVASDIELVLVALRQGIL 211 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 57/210 (27%), Positives = 107/210 (50%), Gaps = 6/210 (2%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 V+I+D H ++R + +L N++L+++ + + + ++ + DL++MDI++P DG Sbjct: 2 KVLIVDDHLMLRKGVLSVLS-NTDLEVIGEASNGQEALELVPKLKPDLVLMDINMPVLDG 60 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 +++KQ+ +KV+ L+ AI+AGA+G++ K ++ +++ +SG Sbjct: 61 VEATRKLKQMYPDLKVVILTVSEIDKDLFEAIKAGADGYLLKNLGPEELVSSLRAAISGE 120 Query: 125 TFFPSETLNYI-----KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 S + + +T LS RE+ +LR +GL+ KEIA KL ++ Sbjct: 121 APISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAKLYVAES 180 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 TV H +I KL L + E + YA L Sbjct: 181 TVKNHMRHILEKLHLRNRSEAVGYAIRTGL 210 >UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EAN1pec RepID=A8L9Z7_FRASN Length = 218 Score = 240 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 2/208 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V++ D H ++ + L+ L +V + +D T D+++MDI++PG Sbjct: 8 IRVLLADDHRLVLDGLSALIDSVDGLTVVGEATSGEQAVDLAGTEHPDVVLMDIEMPGIG 67 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +RI Q T+ V+ L+ E + A++AGA G++ K Q D+ + + G Sbjct: 68 GVEATRRITTAQPTIAVVMLTMYGEDEFVFAALRAGARGYLLKGAQQKDVVRTIGAVARG 127 Query: 124 YTFFPSETLNYIKSNKCSTNSS--TVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 F + + + S + L+ RE +L L +G N IA L L+ KTV Sbjct: 128 DAVFGPDVAHRVLRTFTSPPAENAPFPELTEREREVLSLLANGWPNSRIARHLQLTPKTV 187 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYEL 209 + + SNI KL I A+ L Sbjct: 188 ANNVSNILAKLHAPDRTAAILRARRAGL 215 >UniRef50_B3RA82 Response regulator protein; Response regulator receiver domain, HTH LuxR domain; higly similar to B. subtilis Transcriptional regulatory protein degU (Protease production enhancer protein) n=1 Tax=Cupriavidus taiwanensis RepID=B3RA82_CUPTR Length = 223 Score = 240 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 52/202 (25%), Positives = 100/202 (49%), Gaps = 2/202 (0%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 V+++D HP + + + L+ E+ ++ + I DL++ DI +P +G Sbjct: 6 RVLLVDDHPFVLDGVRLRLEATGEMTVIGQAASVEEAIVLAGRHAPDLVVSDIHMPDANG 65 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 R + +V+V+ LS + Y RA G +V K +++ A++ + +G Sbjct: 66 LQLAARFAEQFPSVRVIALSMHKDPEYVRRAFALGVAAYVLKEAPAHELVTAIRTVAAGG 125 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 T+ +E ++ +++ +S L+ +E T+L+ L G SNKEIA++L S +TV H Sbjct: 126 TYLNAELQAFLHTDEPPPSSRR--ALTPKEATVLKLLAEGRSNKEIAERLGTSVRTVETH 183 Query: 185 KSNIYGKLGLHSIVELIDYAKL 206 + ++ KL + EL+ YA Sbjct: 184 RLHLRRKLRVGGRAELVKYAVH 205 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 240 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 11/213 (5%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 +++ D H I+ I L + ++V + + + ++ D+++MD+++P Sbjct: 2 KIKILLADDHQIVLKGISFFLAMQPDFELVGEAHNGKEAVEKAGELQPDIVLMDLNMPIM 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG IK+ +KVL L+S ++ + A+Q GA G++ K + + + A++ Sbjct: 62 DGIEASALIKEQHPHIKVLVLTSFADQSHIVPALQTGAIGYMLKDVEPDQLAEAIRSAYK 121 Query: 123 GYTFFPSETLNYIKSN-----------KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIA 171 G + + S + S ++ L+ RE+ +L L GLSNK+IA Sbjct: 122 GNIQLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLSNKDIA 181 Query: 172 DKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 L+++ KTV H S+I KL L + +A Sbjct: 182 QTLIVAEKTVKTHVSSILSKLDLSDRTQAALFA 214 >UniRef50_C5C7H0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=9 Tax=Bacteria RepID=C5C7H0_MICLC Length = 230 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 13/221 (5%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P V ++D +IR + +L+ +L +V + R + + D+++MD+ +P Sbjct: 8 PVRVALVDDQALIRSGLAMLVDSQPDLTVVAEAGSGREAVASVSVAGADVVLMDVRMPEM 67 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG + + + +V+ L++ YA AI+AGA+GF+ K ++ A++ + Sbjct: 68 DGIEATRALLRRPDAPRVVVLTTFDLDEYAFDAIEAGASGFLLKDAPPEELLAAIRTVHR 127 Query: 123 GYTFFPSETLNYI-------------KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKE 169 G T + +S +C + V L+ RE +L + G +N E Sbjct: 128 GDAVIAPSTTRRLLTHMAPRLRSDQVRSAECEEQQAAVASLTPREREVLVLMAQGAANLE 187 Query: 170 IADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 IA +L+LS TV H + KLG V+ + A L+ Sbjct: 188 IAAELVLSEATVKTHVGRVLAKLGARDRVQAVLIAHRAGLV 228 >UniRef50_B1Y741 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y741_LEPCP Length = 205 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 1/203 (0%) Query: 9 MDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFTFL 68 D HP++R + +L L +V + D + R+ DL ++D +PG G + + Sbjct: 2 ADDHPVVRQRLRQILMAEPALTVVAEAGDGDEALALARSTDWDLALLDFSMPGCSGLSLI 61 Query: 69 KRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTFFP 128 + +++ VL LS E A ++AGA+G++ K + A++ + +G T Sbjct: 62 EHVRRDFPQRPVLVLSVHDEQLLAPHVLRAGASGYLCKECATEQLIQAIRAVTAGGTHVS 121 Query: 129 SETLNYIKSN-KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHKSN 187 + + + + LS+RE ++ L SG EIA +L L +TV++++ Sbjct: 122 APVAQRLAWQVAIESGGAPHERLSDREYRVMWLLSSGRHIVEIAQELHLRPRTVASYRHR 181 Query: 188 IYGKLGLHSIVELIDYAKLYELI 210 + KLGLH EL+ YA +EL+ Sbjct: 182 VLRKLGLHDTAELVSYAVRHELV 204 >UniRef50_C4ZM15 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZM15_THASP Length = 226 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 3/213 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M+ V+++D H ++R I LL + + + + R ++ T DL++MDI + Sbjct: 1 MEGMRVLLVDDHSLVRAGIRALLGSIAGVAGIEEASSGRQAVELAATMQPDLVLMDIAMD 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 DG + I +KV+ LS + +A++ GA G++ K ++ A+ + Sbjct: 61 DMDGLAATRTIAAAHPHIKVVILSMHDTGDFFEQALRCGARGYLLKDAAVAELEMAIAAV 120 Query: 121 LSGYTFFPSETLNYIKSN---KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 + G + ++ N + + +VL+ R+ IL + SGL KEIA +L LS Sbjct: 121 MRGDVYLSPAVSRHLVGNMLARPPEDERAASVLTPRQTEILELIGSGLGTKEIARRLDLS 180 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 KTV AH++ I +LG+ I L+ A LI Sbjct: 181 VKTVEAHRAQIMERLGVRDIANLLLEAARRGLI 213 >UniRef50_D1B9T1 Two component transcriptional regulator, LuxR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9T1_THEAS Length = 227 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 106/211 (50%), Gaps = 2/211 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M+ +++ D H + R + LL+ +++++ + +D T++ + D+++ DI +P Sbjct: 1 MRKIRIVLADDHRLFRDGLRRLLEMEKDMEVIGEAEDGDATVEMVSALKPDVLLFDIHMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 DG +K +K + + + + +++ + + G + +V K + ++ A++ + Sbjct: 61 KKDGIQVVKDLKAMGCSPRFVAITAFDDDDHITALSSVGIDAYVLKASGMAELLSAIRSV 120 Query: 121 LSGYTFFPSETLNYIKS--NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 G+++ + + S N+ ++ L+ RE+ +L ++ GL+N EIA K++LS Sbjct: 121 YRGHSYVDPKVAGKLLSTFNRRREERDLLSRLTPREMEVLYWISQGLNNGEIARKMVLSE 180 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 KTV H S+I KL L + +A L Sbjct: 181 KTVKNHVSHILKKLDLVDRTQAAVFAWKRGL 211 >UniRef50_C4KAM8 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=C4KAM8_THASP Length = 217 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 6/215 (2%) Query: 1 MKP-----TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIM 55 MKP +++ D H ++RM +LL+ + ++V + D + D+++M Sbjct: 2 MKPPSLHALRILLADDHAVVRMGFRLLLEG-AGAEVVGEADCGEAAVQAFGQLHPDVLLM 60 Query: 56 DIDLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFH 115 D+ +PG G L+R+ +VL LS+ + RA++AGA G++SK +++ H Sbjct: 61 DVSMPGIGGLGALERVLAHHPAARVLMLSAHDDAQIPARALRAGAGGYLSKRAHPDELLH 120 Query: 116 AVQMILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 AV + G + + + + V L+ +E + L G S EIA+ Sbjct: 121 AVATVARGQRYIDPAIAPALALAQFAGGGDPVAALTEKEFAVFLQLARGRSVAEIAETHS 180 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 LS TV H +I KL + + EL A LI Sbjct: 181 LSPSTVGTHLYHIKQKLEVSNAAELALVAVRCGLI 215 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 1/207 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V ++D HP + ++ L ++IV + + I + ++ ++D+ LPG + Sbjct: 2 IQVYLVDDHPFVLQGLKAYLNTREGIEIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPGLN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + IK+ +V+ LSS ++ AI AGA +V K + + A++ G Sbjct: 62 GIEVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAARRG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 I + + L+ RE +L LV G SN++IA L +S TV Sbjct: 122 EPVLTPGVAKKIM-KRAARKGRKTEPLTPREKEVLACLVRGNSNRDIAKTLCISETTVKT 180 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H SNI KL + + + A L+ Sbjct: 181 HVSNILKKLDVKDRTQAVIKAIENNLV 207 >UniRef50_C0GHS5 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHS5_9FIRM Length = 219 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 1/211 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M+ + I+D H ++R+ ++ L + EL+IV + + + D++++D+ L Sbjct: 1 MEKIKIFIVDDHEVVRLGLQGLFARYEELEIVGEAASGEEAVQVVPVIKPDVVLLDVRLQ 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G G + I +KV+ LSS +E A AGA+ +V K ++ A++ + Sbjct: 61 GIHGADTCRLITSAVPGIKVVMLSSFAEPEEVQAAFTAGASAYVLKNITSGNVIKAIKAV 120 Query: 121 LSGYTFFPSETLNYIKSN-KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 + G +F E + S + +S ++ LS RE IL + G +NKEI +L LS K Sbjct: 121 MQGESFIDPEITEQVMSLIRGEKAASQISGLSKREEEILHLVGEGKTNKEIGRELFLSEK 180 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H S I KLG+ + + + +I Sbjct: 181 TVRNHVSRILDKLGVSNRSQAAAFMARRSVI 211 >UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5X6_PELCD Length = 223 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 57/217 (26%), Positives = 108/217 (49%), Gaps = 9/217 (4%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P V + D HP++R + + L + +++ + + D ++ ++ P D+ ++D+D+PG Sbjct: 6 PFKVFLADDHPLLRTGLRMSLSRFADIDFIGEASDGFKAVEKIKQNPPDVALIDVDMPGL 65 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G ++ +++ + +L LSS S+ + A+QAGA+G+V K D N++ ++ Sbjct: 66 SGIAAVRMLRKQYPDMTLLILSSYSDKHFIEEAMQAGADGYVLKSIDINELADLIRAFSC 125 Query: 123 GYTFFPSETLNYIK---------SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADK 173 G ++ + + + L+ RE IL L G NKEI++ Sbjct: 126 GEHPMSPYLMDLAVDWHASEQEEESPADKDDESDAFLTRREQQILSCLAQGQGNKEISNA 185 Query: 174 LLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 L +S +TV H NI+ KL + S +E + AK +LI Sbjct: 186 LFISTETVKTHIKNIFKKLEVKSRLEAVIAAKEKKLI 222 >UniRef50_C7LQH4 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQH4_DESBD Length = 222 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 7/215 (3%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P ++I+D HP+ R + L +L +V + + +T DL ++DI LP Sbjct: 4 PKRILIIDDHPLYRDGLRARLDTRPDLCVVGEAGTCAEGLRLTQTLAPDLAVIDISLPDG 63 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G + I+ + + VL +S ++ + A QAGA+G++SK + I A++ +LS Sbjct: 64 SGIELTREIRLARPDLPVLIVSMHAKLDFIAAAFQAGASGYMSKESGGEGILQAIETVLS 123 Query: 123 GYTF----FPSETLNYI---KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 G + L + K T ++ LS RE ++R L GL+ +EIA KL Sbjct: 124 GGQYLDGSLSPSVLRRLSDISGRKAKTVDASYGSLSLREQQVMRLLAEGLTPEEIAAKLF 183 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S KTV H+ I KLG+ S V + +A LI Sbjct: 184 VSRKTVLNHRYAIMTKLGIKSPVAFVRHAARLGLI 218 >UniRef50_D2QF32 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QF32_9SPHI Length = 223 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 15/219 (6%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P ++I D H ++R I +LL+ +++QIV + D ID L + D++++DI +P Sbjct: 2 PIRILIADDHSVVRKGIRMLLEDETDIQIVGEASDGDEAIDLLASIGTDVLLLDITMPRM 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G LK I + V+ L S S Y +A+Q GA G++ K ++ AV+ ++ Sbjct: 62 SGIEALKVISKKYPAVRTLMFSMHSNPDYIVKAVQHGAAGYLLKDTGLEEMLRAVRTVVD 121 Query: 123 GYTFFPSETLNYIKSNKCSTNS---------------STVTVLSNREVTILRYLVSGLSN 167 G ++P + I + N+ S +++RE +L L+ G+S+ Sbjct: 122 GDLYYPPNASSVIIRSLVLPNANLTKEPAKAGGSVSKSIWNRITSREGQVLTCLIDGMSS 181 Query: 168 KEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKL 206 EIA+K +S TV+ +++I K G+ + +LI A Sbjct: 182 PEIAEKFGISPNTVANQRASIIRKAGVKNTADLIRLALE 220 >UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms RepID=B9PAD6_POPTR Length = 326 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 8/206 (3%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRT----RPVDLIIMDIDLP 60 V+++D H ++R + + L L++V + DD + +L R DL+I DI + Sbjct: 116 RVLLIDDHALVRDGMRMHLTLQPGLEVVGEADDGEAALAWLAAAEAGRMPDLVITDIGMR 175 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G G + + VL +S Y +AI+AGA G+V K +++ A+Q + Sbjct: 176 GMGGIALAGALHDRYPELAVLIVSMHDNLEYVRQAIRAGARGYVLKDAPADELLAAIQAV 235 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 L+G F+ + + + S + L+ RE IL + G +NK+IA +L +S +T Sbjct: 236 LAGRVFYSARIARGMAAQAV----SPLDALTPRERDILHGIGRGQANKDIAVQLGVSVRT 291 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKL 206 V H+ N+ KLG+ EL+ YA Sbjct: 292 VETHRLNLKRKLGIEGRAELVKYAVQ 317 >UniRef50_Q3K943 Putative LuxR family response regulator n=4 Tax=Gammaproteobacteria RepID=Q3K943_PSEPF Length = 208 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 123/207 (59%), Gaps = 2/207 (0%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 SV I+D HP+IR+++ +LL+ + ++V +TD+ + +R DLII+DI +P DG Sbjct: 3 SVFIVDDHPVIRLAVRMLLE-HEGYKVVGETDNGVDAMQMVRECMPDLIILDISIPKLDG 61 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 L R + S K L L+++ + R +Q+GA+G+V K D +++ A++ +LSGY Sbjct: 62 LEVLARFNAMSSPFKTLVLTAQCPTLFGIRCMQSGASGYVCKQEDLSELVSAIKAVLSGY 121 Query: 125 TFFPSETLNYIKSNKCS-TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 +FPS+ LN ++ + +++RE+ +L+ G +NKEIA + LSNKTVS Sbjct: 122 NYFPSQALNPVRHDDVRYAELELFKSVNDRELMVLQLFAQGRTNKEIAKGMFLSNKTVST 181 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 +K + KL S+VELI+ AK L+ Sbjct: 182 YKKRLMQKLKAKSLVELIEMAKRNALV 208 >UniRef50_C7I0E4 Two component transcriptional regulator, LuxR family n=2 Tax=Thiomonas intermedia K12 RepID=C7I0E4_THIIN Length = 226 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 4/208 (1%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 V+I+D H ++ S+ L N ++Q V D + +R R ++++D+ +P +G Sbjct: 20 RVLIIDDHALLGESLARFLGSN-DMQAVW-CGDLVEAMQSIRDRSWSVVLLDLSMPRGNG 77 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 LKRIK + + VL LS E +A RA++ GA G+++K + + A+Q ++ G Sbjct: 78 LDLLKRIKLMHPDLPVLILSMHPEQQFALRALRGGAAGYLTKGCSPDVLVEAIQKVVHGG 137 Query: 125 TFFPSETLNYIKS--NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + + + N+ LS+RE+ + LV G S ++AD+L +S KTVS Sbjct: 138 RYLTPGVAEQLANYMNEGEAAEEPHARLSDREMQVFMRLVEGKSVNQVADELHISCKTVS 197 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 HK+ + KL L + +L+ YA ++ Sbjct: 198 THKTRLMHKLALDNDADLVRYAMHQGIV 225 >UniRef50_C4XSZ8 NarL family two-component response regulator n=2 Tax=Desulfovibrio RepID=C4XSZ8_DESMR Length = 226 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 7/216 (3%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K T + I D H ++R + +L + ++V + D + R D++++D+ L G Sbjct: 4 KRTRIAIADDHGLMRQGLAAILAADPRFEVVGEAADAAGAVGLARDLAPDVLLLDVGLAG 63 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G R+ + +V+ ++ + +AGA G+V K + + A++ +L Sbjct: 64 GSGVDVAGRVAGLAPECRVVMVTMHARLDLVAACFRAGAMGYVVKDSAATSLVAAIEAVL 123 Query: 122 SGYTFFPSETLNYI-------KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKL 174 G + + + + K L+ RE ILR L G S IA +L Sbjct: 124 RGERYLDAAITPQVLLRLDEYAARKTGPRDPAYDSLTRREQQILRLLAEGRSVAAIATEL 183 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S KTV H++NI GKLGL ++ EL+ YA ++ Sbjct: 184 FISKKTVENHRANICGKLGLANLAELVRYAARLGIV 219 >UniRef50_B1ZT64 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B1ZT64_OPITP Length = 274 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 5/210 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 T + ++D HP++RM + ++ +++++ + D + DL+I DI L G Sbjct: 41 KTRIYVVDDHPLMRMGLRAMINGEPDMEVIGEAADSATATAEIMKLRPDLVIADISLRGN 100 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G +K +K + V+ +S E YA R ++AGA +V K + + A++ + Sbjct: 101 SGIELIKNVKAFDPGIDVVVVSMYDESIYALRVLKAGARAYVMKQDVTTRVLDAIRRARN 160 Query: 123 GYTFFPSETLNYIKSN-----KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 G F + + + S V+ LS+RE+ I+ + GL +EIA KL LS Sbjct: 161 GQLFVSERVATQMLNRFVDGTEDGAADSPVSSLSDRELEIVNLIGEGLPTREIAAKLFLS 220 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLY 207 KTV H+ +I KL L + +L+ + + Sbjct: 221 IKTVETHRVHIKRKLNLANATQLVQFCVRW 250 >UniRef50_B7AAT6 Two component transcriptional regulator, LuxR family n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAT6_THEAQ Length = 207 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 1/207 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V++++ H ++R + LL+ +++V + R ++ L D+ I+D+ LP Sbjct: 2 IRVVLVEDHLLVRSGLRHLLEARGPVRVVGEAGSCREALELLEKVQADVAILDVSLPDGT 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +R+++ +++L LS + Y +QAG G+VSK ++ AV + G Sbjct: 62 GIALCQRLRERFPELRLLALSMHEDLEYVRGFLQAGGQGYVSKAAVDQELLDAVLAVARG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + + S+ LS RE +LR L GLS+KE+A+KL +S KTV+ Sbjct: 122 ERYLNPALAMRLAMELVR-ESAEEAPLSPREEEVLRLLAQGLSHKEVAEKLGISEKTVAT 180 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 ++ KLGL S EL+ YA I Sbjct: 181 YRERGMEKLGLASRSELLRYAARKGWI 207 >UniRef50_C3JVF4 Two component transcriptional regulator, LuxR family n=2 Tax=Rhodococcus erythropolis RepID=C3JVF4_RHOER Length = 220 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 8/215 (3%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I D ++R E+ L + E+++V + +R D+++MDI +P D Sbjct: 2 IDVLIADDQQVVRQGFELFLSGHPEIRVVGHAKTGVEAYEQVRALRPDVVLMDIRMPHGD 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G T + + +V+ +++ Y A+ +GA GF+ K D ++ AV + G Sbjct: 62 GLTATREVLAEFPGTRVIVITTFDLDEYVFEALDSGAAGFLLKDADPEELSSAVLTVAEG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTV--------LSNREVTILRYLVSGLSNKEIADKLL 175 + + + + ++ LS RE+ +++ L GL N +IAD L Sbjct: 122 GSVLSPRLTSRLIVEFARRKPAPMSTARSGSDHGLSAREMDVVQLLSQGLGNNDIADSLS 181 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 L TV +H SNI KL + + V+++ +A +I Sbjct: 182 LEQSTVKSHISNICKKLQVRTRVQIVIWAYRNNVI 216 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 100/207 (48%), Gaps = 6/207 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +++ D HPI+ ++ + LQ S++ ++ D R ++ D+ +MD+ +P + Sbjct: 9 IRILLADDHPILGQALTMFLQCESDMTVIGHAGDGREALELFHQHQPDVALMDLRMPKME 68 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + I +++ L++ R ++AGA G++ K + N++ A++ + G Sbjct: 69 GADAIAAICAKFKHARIVVLTTFDGDEDIYRGLRAGAKGYLLKGAEPNELLDAIRTVHKG 128 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + P + S LS+RE+ +LR + G +N++I++ L ++ TV Sbjct: 129 QKYIPPTIAAKLAERMSSEE------LSDRELEVLRLIAKGKNNQQISNVLNIAESTVRF 182 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H +NI+GKL + + + A ++ Sbjct: 183 HTNNIFGKLNVSDRTQALVTALNRGIV 209 >UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SCN0_METPP Length = 210 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 98/207 (47%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D H I+R + LL+ S++ +V + D ++ R ++++D+ LPG Sbjct: 3 IRVMLVDDHAIVREGYKRLLELQSDIVVVAEAGDGGEALNQWRALRPAVVVIDLGLPGMG 62 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + R++Q ++L S + + +A++AGA G+V+K + + + AV+ + G Sbjct: 63 GLELIARLRQRDEACRMLAFSMHRDAVWVAQALRAGALGYVTKSSAPSQLVAAVREVNQG 122 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + + S S LS RE ++R LV G + +EIA L LS KTV Sbjct: 123 RRVLSPDVSGEVASALLDPQDSAAHGLSPREFEVMRLLVGGRTPQEIAQSLSLSVKTVHN 182 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 I KLG S EL A I Sbjct: 183 VHYQIKSKLGTASDFELARMAWQRGWI 209 >UniRef50_C6C0G1 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0G1_DESAD Length = 218 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 106/209 (50%), Gaps = 5/209 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +V+I D H ++R ++ +L+ S + ++ ++ + R D+ +MD+ +P Sbjct: 5 VTVVIADDHALVREGLKTILKSQSGISVLGMAENGEEAVRLCRRLNPDVALMDLSMPIKS 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++ + K L L++ E + A+ AGA+G+V K + ++ A++ ++ G Sbjct: 65 GVQAIQELSGEG-KTKFLALTAHVEPDHIYSALDAGASGYVLKTSSSKELVMAIETVMQG 123 Query: 124 YTFF----PSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 + +E S + ++ L+ RE +L+ +++G N+EIAD L++S K Sbjct: 124 KVYLAPDISAEVAKGFLQRDRSNSCDSLESLTEREREVLKQVLAGYKNREIADLLVISVK 183 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYE 208 TV H+SN KLGL S EL Y++ + Sbjct: 184 TVEKHRSNFMKKLGLRSKAELKAYSEELK 212 >UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W2Z0_DYAFD Length = 205 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 4/207 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++I+D HP++ ++ LL +Q+V + I +L+ VD+ +DI+LP Sbjct: 3 VRILIVDDHPLVLEGLKSLLADAEGVQVVGTATNAIEAIAFLKGNEVDIAFLDINLPDIS 62 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G K++K VK L LS+ +E Y R IQ GA+G++ K + + DI A+ + +G Sbjct: 63 GIDLCKKVKDQFPEVKTLALSTFNERAYVSRMIQNGASGYLIKSSGKEDILEAIAQVQAG 122 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 F +T TV L+ RE +L + GL+N +IA++L +S TV++ Sbjct: 123 GYFMN----VQFDQVTPATAPKTVPFLTRREKEVLVLIAEGLTNPQIAEQLFISVTTVNS 178 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H+ N+ K + + LI A LI Sbjct: 179 HRQNLLIKFEVSNTASLIKLAAGLGLI 205 >UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WI37_BACSK Length = 210 Score = 239 bits (611), Expect = 5e-62, Method: Composition-based stats. Identities = 51/209 (24%), Positives = 102/209 (48%), Gaps = 2/209 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V++ + ++R ++ +++ + ++++ + DD R + T D+ I+DI +P D Sbjct: 2 IKVLLAEDQVMVRQGLKAMIETDEDIKVTGEADDGRKALRLCETHVFDVAILDIRMPEMD 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G K ++ +K+L L++ + Y +++ G NG++ K D + +++ ++G Sbjct: 62 GIEAAKMMRLRYPKMKILMLTTFDDHQYVVESLKLGVNGYMLKNGDTESLIRSIKSTING 121 Query: 124 YTFFPSETLNYIKSN--KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + + + S L+ RE IL + GL+NKEIA++L LS TV Sbjct: 122 GLSLEDQVAAKVVPTLLQNQEEPSIDPSLTPRERAILTCIGEGLNNKEIAERLGLSVGTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S+I+ KL L +L YA + L+ Sbjct: 182 KNQTSHIFDKLALRDRTQLAIYAIRHRLV 210 >UniRef50_C1RMQ2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1RMQ2_9CELL Length = 254 Score = 239 bits (611), Expect = 5e-62, Method: Composition-based stats. Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 7/214 (3%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 T+V+++D P+IR I +L+ +++V + D + R D+ +MD+ +PG D Sbjct: 10 TTVLVVDDQPLIRQGIRAVLRGQPGVEVVGEAHDGHSAVRTARRLRPDVTLMDVQMPGMD 69 Query: 64 GFTFLKRIKQ-IQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G + I V+ L+ + + A++AGA G V K +++ A+ + Sbjct: 70 GVEATRVICADDDPPTSVVVLTMYDQDEHVFEALRAGARGLVLKDAPTSELVAAIHAAAA 129 Query: 123 GYTFFPSETLNYIKSNKCSTN------SSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 G + + + L+ RE + R LV GLS E A++L L Sbjct: 130 GDSLLSPSVTRRLIEEFARRPTVRMEATDGPAELTARERDVFRLLVQGLSTAEAAERLTL 189 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 + TV +H ++Y KLG+ V+ + YA + L+ Sbjct: 190 GDSTVKSHVQSLYRKLGVRDRVQAVIYAYEHGLV 223 >UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFU2_9SPHI Length = 219 Score = 239 bits (611), Expect = 5e-62, Method: Composition-based stats. Identities = 50/212 (23%), Positives = 103/212 (48%), Gaps = 5/212 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLR--TRPVDLIIMDIDL 59 + VII D H ++ +E L++ ++++++ + L VD+ ++D+D+ Sbjct: 5 EKIKVIIADDHHMVLEGLEALIKVTNDIEVIGLAYNGHHAFKLLELNQLDVDIAVLDVDM 64 Query: 60 PGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 P DG ++I+ +KVL L+ + Y I AGA+G++ K +++ +A++ Sbjct: 65 PVQDGLETTRKIRTEYPNIKVLILTMHNNESYIKEIIAAGASGYILKNRGASELVNAIRT 124 Query: 120 ILSGYTFFPSETLNYI---KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 I +G +F + + + L+ RE +L + G++ KEI+ +L + Sbjct: 125 IYAGEEYFSKAVTDTLIKSIQESKKAKPNPQVKLTKREKEVLALIGKGMTTKEISKQLFI 184 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYE 208 ++ TV H+ N+ KL + + ELI Y + Sbjct: 185 ADTTVETHRRNLIDKLEVKNSKELILYVAKNK 216 >UniRef50_B1ZWL0 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZWL0_OPITP Length = 234 Score = 239 bits (611), Expect = 5e-62, Method: Composition-based stats. Identities = 59/209 (28%), Positives = 113/209 (54%), Gaps = 4/209 (1%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 + V ++D HPI R + VL+ + +L + + D + ID ++ D+ ++DI L T Sbjct: 19 KSRVFLVDDHPITRQGVAVLINQERDLMVCGEADSAPVAIDLIQKLSPDVALVDITLKTT 78 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G +K +K ++ + VL +S E +A RA++AGA G++ K I A++ +LS Sbjct: 79 SGIELMKHLKALRPEMPVLIMSMHDESLFAERALRAGAKGYIMKHEASAKILTAIRRVLS 138 Query: 123 GYTFFPS----ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 G + + L+ + +N+ ++ LS+RE+ + + + +G ++IA KL LS Sbjct: 139 GELYLSDKMKEKMLHRLVNNRKEEVVFSIDTLSDREMEVFQLIGNGYGTRQIASKLNLSV 198 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLY 207 KT+ +++ ++ KL L S EL+ +A + Sbjct: 199 KTIDSYREHLKLKLRLESGTELVRHAIQW 227 >UniRef50_Q2W107 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Magnetospirillum RepID=Q2W107_MAGSA Length = 214 Score = 238 bits (610), Expect = 6e-62, Method: Composition-based stats. Identities = 56/210 (26%), Positives = 106/210 (50%), Gaps = 3/210 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D H + R ++ L+ S+++IV + + T+ L D++++DI LP + Sbjct: 3 IRVMLVDDHRMFREALRAPLEAESDMEIVAEANSGADTLASLDLACPDVLVLDIGLPDLN 62 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + + ++++ LS ++ Y ++AGA+G+V K + +++ A++ + G Sbjct: 63 GIEVARTAIRRHPDLRIVALSGFADRIYIEEMLKAGAHGYVVKSSGADELVSAIRAVAGG 122 Query: 124 YTFFPSETLNYIK---SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 +F E + + T + +VL RE +L L GL + EIA L ++ T Sbjct: 123 SSFLSPEATQVMLRHIQSDADTVAPPPSVLGKREREVLVLLAGGLRSAEIAASLGIAVGT 182 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V H+ NI KLG++ +LI YA LI Sbjct: 183 VEVHRRNIKQKLGMNRTADLIRYAVHEGLI 212 >UniRef50_Q021D5 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q021D5_SOLUE Length = 210 Score = 238 bits (610), Expect = 6e-62, Method: Composition-based stats. Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 5/208 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P SV+++D H ++R +L+ + + +V + +D + +++MD +P Sbjct: 5 PISVLLVDDHSLVRRGFRRMLEDDPAIVVVGEAEDGHQAVQLAGELHPRVVVMDFAMPSM 64 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +G + I + +L LS +E Y ++AG G++ K ++ AV+ + + Sbjct: 65 NGAVAARHILRTAPETAILILSMHAEASYVRTCLEAGVRGYLLKNALDLEMVAAVKQVAA 124 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G + + L+ RE+ +L+ +V G SNKEIA L LS TV+ Sbjct: 125 GKQVLDRRL-----GALDLPSGAAPAGLTTRELEVLQLIVHGKSNKEIAAVLSLSANTVA 179 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 H++NI LG+H+ EL+ YA L+ Sbjct: 180 VHRANIMQTLGIHNTAELVVYAIRQGLV 207 >UniRef50_A5FIE9 Two component transcriptional regulator, LuxR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FIE9_FLAJ1 Length = 213 Score = 238 bits (610), Expect = 7e-62, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 2/212 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M +++I D H + I LL++ + I+ K + ++ ++ VD II+DI +P Sbjct: 1 MNQINLLIADDHTMFLQGIISLLEQEPNITIIDKAVNGIEALEIIKKGVVDFIILDISMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 DG K +K+ VK+L +S+ S R I+ G NG++ K + ++ A+ I Sbjct: 61 EMDGIELSKILKKQHPNVKILIVSTHSNVMIVSRLIRIGVNGYLLKNAAKEELLKAINTI 120 Query: 121 LSGYTFFPSETLNYIKSN--KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 SG +F E SN K S +T LS+RE IL + + EIA+K +S Sbjct: 121 ASGENYFAEELEEKHLSNSSKIEKQVSNLTELSSREKEILVLIAHEYNTAEIAEKTFISL 180 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV+ H+ N+ KL + L+ YA L+ Sbjct: 181 NTVNTHRRNLLSKLNAKNTAGLVKYAVENGLV 212 >UniRef50_Q2YB36 Two component transcriptional regulator, LuxR family n=3 Tax=Betaproteobacteria RepID=Q2YB36_NITMU Length = 217 Score = 238 bits (610), Expect = 7e-62, Method: Composition-based stats. Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 4/210 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRT-RPVDLIIMDIDLP 60 V+++D H ++R + +L+ ++++ + D + L+ D+++MD+ L Sbjct: 4 SKAQVMLVDDHAMLRHGMAMLINLEPDMEVFAEAGDGDEALATLKAGHHADIVLMDVSLK 63 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 GF +K I + + VL +S E YA RA++AGA G+V K + A+ + Sbjct: 64 TLSGFEVIKSIHTLLPALPVLVVSMHDEGVYAERALRAGARGYVMKQEPGEVLVTAIHEV 123 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSST---VTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 L G + + + NS + L+ E +L + SG S++EIA L S Sbjct: 124 LKGNIYLSKPMHAKLLNRVAGGNSEPEPLINSLTPSEFEVLHLIGSGHSSQEIAKLLSRS 183 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLY 207 KT+ H+ NI KL L +LI YA + Sbjct: 184 IKTIETHRFNIRTKLNLKDGADLIRYATHW 213 >UniRef50_Q2IIQ2 Two component transcriptional regulator, LuxR family n=3 Tax=Anaeromyxobacter RepID=Q2IIQ2_ANADE Length = 210 Score = 238 bits (610), Expect = 7e-62, Method: Composition-based stats. Identities = 51/207 (24%), Positives = 100/207 (48%), Gaps = 1/207 (0%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 +++ D H + R + +L+ V + + L +P D++++DI + G + Sbjct: 3 RILLADDHAMFRSGLRRILEAEFPGASVGEAATIADVQERLGAQPWDVLLLDISMAGQNS 62 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 L +K+ + V+ LS + + +A++AGA+ +++K ++ A++ +L+G Sbjct: 63 LNALPPLKERHPRLPVVVLSMYGDRQFVIQALRAGASAYLTKERAPEELIRAIRSVLAGR 122 Query: 125 TFFPSETLNYIKSNKCSTN-SSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + + + + S LS RE+ I L + S EIA++L LS KTVS Sbjct: 123 RYVGDDLAEQLADHLAGGGTGSPHERLSPRELEIFLQLAAARSVSEIAERLQLSVKTVST 182 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 ++ I K+ L S EL+ YA + L+ Sbjct: 183 YRGRILEKMALRSNAELMQYAVRHGLV 209 >UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9E4_9BACT Length = 227 Score = 238 bits (609), Expect = 9e-62, Method: Composition-based stats. Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 7/209 (3%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M+P SVII+D H ++ I LL+ ++ +V K + + ++ D+++ D+ +P Sbjct: 1 MQPISVIIVDDHQLMLEGIASLLRATPDITLVAKAQSAKEAFELVKQHNPDIVVADLSMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G G +++IK +++ L+ A GAN FV K + D+ + + Sbjct: 61 GVTGLDLIQQIKDAGLLTRIIMLTMHRTRLTVHEAFSVGANAFVLKSDAFEDLVDIIHRV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 G S+ + LS RE +L + +GLSNKEI+ +L +S+KT Sbjct: 121 HEGENTLTSK-------GLPPYEPACAATLSPREKDVLEGISAGLSNKEISRRLAISSKT 173 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 V H+S I KL + EL+ A L Sbjct: 174 VETHRSRIMQKLNVTKATELVREAMRSGL 202 >UniRef50_C7PMV2 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PMV2_CHIPD Length = 222 Score = 238 bits (609), Expect = 9e-62, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 103/212 (48%), Gaps = 5/212 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++I D H I R + ++L + ++ +V + ++ R ++ L + D+++ D+ +P D Sbjct: 5 IRLVIADDHEIFRDGLALMLSRQPDITLVGQANNGRELLELLTSVEADVVMTDLKMPLMD 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G T + + Q +K++ LS E ++AGA G++ K D+ +I A+ + Sbjct: 65 GITATRALLQRNPDIKIIALSMFDEEELIVEMLEAGAKGYLLKNADKQEIIEAINSVYED 124 Query: 124 YTFFPSETLNYIK-----SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 + F+ +T + S + ++RE I+R + + +EI DK+ LS Sbjct: 125 HIFYCRQTSARLAAMIVKSRFNPPRENNAVTFTDREKEIIRLICQQFTAQEIGDKIFLSK 184 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +TV H++ I K+ + + ++ +A LI Sbjct: 185 RTVEGHRTRILEKMNVKNTAGVVVFALKNNLI 216 >UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7V6_ACAM1 Length = 222 Score = 238 bits (609), Expect = 9e-62, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 109/219 (49%), Gaps = 10/219 (4%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +P +++++ H ++RM ++ S+ +++ + ++ + ID ++++MDI+LP Sbjct: 4 QPIHLLLVEDHALMRMGLKGQFSLESDFEVIGEAENGQQAIDLAAQLQPNIVLMDIELPI 63 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG + ++IK ++VL LS+ + + AGA+G+ K D + +++I Sbjct: 64 LDGISATQKIKATCPDIRVLALSAFGKDNQVVGMLAAGADGYCLKSIDWQQLLAVIRLIQ 123 Query: 122 SGYTFFPSETLNYIKS----------NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIA 171 G T+ + + + S ++ TVLS+RE +L+ + G SN+EIA Sbjct: 124 GGGTYLDPQIAHKLASMLKSANTPTTAPAHRQTAPATVLSDREREVLQLISEGCSNQEIA 183 Query: 172 DKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 ++L LS T+ ++ I KL + V+ A LI Sbjct: 184 NQLYLSLGTIKSYVRMILNKLSVDDRVQAAAKAVREGLI 222 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 311 1e-83 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 302 5e-81 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 301 9e-81 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 298 6e-80 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 295 6e-79 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 294 1e-78 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 293 3e-78 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 293 3e-78 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 292 5e-78 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 292 6e-78 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 289 5e-77 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 288 6e-77 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 288 1e-76 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 287 1e-76 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 287 2e-76 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 287 3e-76 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 285 5e-76 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 285 8e-76 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 284 1e-75 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 283 2e-75 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 283 2e-75 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 283 2e-75 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 283 3e-75 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 283 3e-75 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 283 4e-75 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 282 5e-75 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 282 6e-75 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 282 7e-75 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 282 7e-75 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 282 7e-75 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 282 8e-75 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 282 8e-75 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 281 8e-75 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 280 2e-74 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 280 2e-74 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 280 3e-74 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 280 3e-74 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 280 3e-74 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 279 4e-74 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 279 4e-74 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 279 4e-74 UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac... 278 6e-74 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 278 6e-74 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 278 6e-74 UniRef50_D1VBH1 Two component transcriptional regulator, LuxR fa... 278 6e-74 UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 278 7e-74 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 278 9e-74 UniRef50_B0C955 Two-component transcriptional regulator, LuxR fa... 278 9e-74 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 277 1e-73 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 277 1e-73 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 277 2e-73 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 277 2e-73 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 277 2e-73 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 277 2e-73 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 277 2e-73 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 277 2e-73 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 277 2e-73 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 277 2e-73 UniRef50_P55184 Uncharacterized transcriptional regulatory prote... 277 2e-73 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 277 3e-73 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 276 3e-73 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 276 3e-73 UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR fa... 276 4e-73 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 276 4e-73 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 276 4e-73 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 276 4e-73 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 276 4e-73 UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa... 275 5e-73 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 275 5e-73 UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T... 275 5e-73 UniRef50_A9AX03 Two component transcriptional regulator, LuxR fa... 275 5e-73 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 275 8e-73 UniRef50_A7NP18 Two component transcriptional regulator, LuxR fa... 275 9e-73 UniRef50_C6XAP6 Two component transcriptional regulator, LuxR fa... 274 1e-72 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 274 1e-72 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 274 1e-72 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 274 2e-72 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 274 2e-72 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 273 2e-72 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 273 3e-72 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 273 3e-72 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 273 3e-72 UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID... 273 3e-72 UniRef50_A3Y699 Putative two component system response regulator... 273 4e-72 UniRef50_Q04VJ6 Receiver component of a two-component response r... 272 4e-72 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 272 4e-72 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 271 7e-72 UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa... 271 8e-72 UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa... 271 8e-72 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 271 8e-72 UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR fa... 271 9e-72 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 271 1e-71 UniRef50_C0N6H7 Response regulator receiver domain protein n=1 T... 271 1e-71 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 271 1e-71 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 271 1e-71 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 270 2e-71 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 270 2e-71 UniRef50_C7RMN3 Two component transcriptional regulator, LuxR fa... 270 2e-71 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 270 2e-71 UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacill... 270 2e-71 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 270 3e-71 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 270 3e-71 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 270 3e-71 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 269 4e-71 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 269 4e-71 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 269 4e-71 UniRef50_C5C7H0 Response regulator containing a CheY-like receiv... 269 5e-71 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 269 5e-71 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 269 5e-71 UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobact... 269 5e-71 UniRef50_Q15T22 Two component transcriptional regulator, LuxR fa... 268 6e-71 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 268 6e-71 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 268 7e-71 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 268 7e-71 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 268 7e-71 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 268 8e-71 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 268 9e-71 UniRef50_D1BX47 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_C0GJ72 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_C7MLQ9 Response regulator containing a CheY-like receiv... 267 1e-70 UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib... 267 2e-70 UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_C3JVF4 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_C1RMQ2 Response regulator containing a CheY-like receiv... 267 2e-70 UniRef50_A9AZR3 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_Q13QW9 Two component transcriptional regulator, LuxR fa... 266 2e-70 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 266 2e-70 UniRef50_D1B9T1 Two component transcriptional regulator, LuxR fa... 266 2e-70 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 266 3e-70 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 266 3e-70 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 266 3e-70 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 266 3e-70 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 266 4e-70 UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR fa... 265 5e-70 UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomyceta... 265 6e-70 UniRef50_B2JSN3 Two component transcriptional regulator, LuxR fa... 265 6e-70 UniRef50_A1K960 Probable transcriptional regulator, LuxR family ... 265 7e-70 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 265 8e-70 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 265 8e-70 UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92... 265 8e-70 UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ... 265 8e-70 UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 ... 265 1e-69 UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobact... 264 1e-69 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 264 1e-69 UniRef50_C4DCK3 Response regulator containing a CheY-like receiv... 264 1e-69 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 264 1e-69 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 264 1e-69 UniRef50_C5VAN3 Two component transcriptional regulator, LuxR fa... 264 1e-69 UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Synt... 264 1e-69 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 264 1e-69 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 264 1e-69 UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC... 264 2e-69 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 264 2e-69 UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR fa... 264 2e-69 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 263 2e-69 UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga t... 263 2e-69 UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID... 263 3e-69 UniRef50_B9XAM6 Two component transcriptional regulator, LuxR fa... 263 3e-69 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 263 3e-69 UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeoba... 263 3e-69 UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR fa... 263 3e-69 UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryoc... 263 3e-69 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 263 4e-69 UniRef50_A5URU4 Two component transcriptional regulator, LuxR fa... 263 4e-69 UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa... 262 4e-69 UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR fa... 262 4e-69 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 262 5e-69 UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacilla... 262 5e-69 UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 T... 262 5e-69 UniRef50_A3CKH3 Two-component system transcriptional regulator (... 262 5e-69 UniRef50_D1BCA8 Two component transcriptional regulator, LuxR fa... 262 6e-69 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 262 6e-69 UniRef50_C6WV69 Two component transcriptional regulator, LuxR fa... 262 6e-69 UniRef50_D1BGN7 Response regulator containing a CheY-like receiv... 262 6e-69 UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=... 261 8e-69 UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa... 261 8e-69 UniRef50_B4D831 Two component transcriptional regulator, LuxR fa... 261 9e-69 UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrh... 261 9e-69 UniRef50_UPI0001789C57 two component transcriptional regulator, ... 261 1e-68 UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobac... 261 1e-68 UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding... 261 1e-68 UniRef50_A1WT06 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_A0NNP3 Response regulator containing a CheY-like receiv... 261 1e-68 UniRef50_C7NKN7 Response regulator containing a CheY-like receiv... 261 1e-68 UniRef50_UPI0001C314AF two component transcriptional regulator, ... 261 2e-68 UniRef50_A8L3K7 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_B4D2I0 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 T... 260 2e-68 UniRef50_A4FAA4 Two component system response regulator n=2 Tax=... 260 2e-68 UniRef50_Q47DK2 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_A5WFD3 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_B6A2W0 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermop... 260 2e-68 UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=... 260 2e-68 UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, ... 260 2e-68 UniRef50_Q024A4 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_C7QC31 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_Q027R2 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 260 3e-68 UniRef50_B4D808 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22... 260 3e-68 UniRef50_B4D2X8 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_Q47FR0 Two component transcriptional regulator, LuxR fa... 259 4e-68 UniRef50_A6BYP5 Response regulator receiver domain protein n=1 T... 259 4e-68 UniRef50_C4XMF2 NarL family two-component response regulator n=1... 259 4e-68 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 259 4e-68 UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paeniba... 259 5e-68 UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi... 259 5e-68 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 259 5e-68 UniRef50_C1TL94 Response regulator containing a CheY-like receiv... 259 5e-68 UniRef50_A2SLK8 Two component transcriptional regulator, LuxR fa... 259 6e-68 UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiob... 259 6e-68 UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methyli... 258 6e-68 UniRef50_D1CI66 Two component transcriptional regulator, LuxR fa... 258 8e-68 UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ecto... 258 8e-68 UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Act... 258 8e-68 UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl... 258 8e-68 UniRef50_P94439 Uncharacterized transcriptional regulatory prote... 258 8e-68 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 258 8e-68 UniRef50_C7R398 Two component transcriptional regulator, LuxR fa... 258 9e-68 UniRef50_C6WIC9 Two component transcriptional regulator, LuxR fa... 258 1e-67 UniRef50_C4XNR8 NarL family two-component response regulator n=1... 258 1e-67 UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy... 258 1e-67 UniRef50_A9VLR5 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family prot... 257 2e-67 UniRef50_B1ZU87 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomyceta... 257 2e-67 UniRef50_C1A730 NarL family two-component response regulator n=1... 257 2e-67 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 256 2e-67 UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR fa... 256 2e-67 UniRef50_C0GHS5 Two component transcriptional regulator, LuxR fa... 256 2e-67 UniRef50_C1B8T3 NarL family two-component response regulator n=6... 256 3e-67 UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacilla... 256 3e-67 UniRef50_A1VB77 Two component transcriptional regulator, LuxR fa... 256 3e-67 UniRef50_C5UZV9 Two component transcriptional regulator, LuxR fa... 256 3e-67 UniRef50_A9B4P1 Two component transcriptional regulator, LuxR fa... 256 4e-67 UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium... 256 4e-67 UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR fa... 256 4e-67 UniRef50_B4B0U5 Two component transcriptional regulator, LuxR fa... 256 4e-67 UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=... 256 4e-67 UniRef50_UPI0001789139 two component transcriptional regulator, ... 256 4e-67 UniRef50_C2RNB5 Two-component protein Kinase n=1 Tax=Bacillus ce... 256 4e-67 UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR fa... 255 5e-67 UniRef50_C5T9P3 Two component transcriptional regulator, LuxR fa... 255 5e-67 UniRef50_C5C8Q1 Response regulator containing a CheY-like receiv... 255 6e-67 UniRef50_B3PFS2 GacA n=1 Tax=Cellvibrio japonicus Ueda107 RepID=... 255 7e-67 Sequences not found previously or not previously below threshold: UniRef50_A0K2I9 Two component transcriptional regulator, LuxR fa... 279 5e-74 UniRef50_C7Q058 Two component transcriptional regulator, LuxR fa... 258 1e-67 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 311 bits (798), Expect = 1e-83, Method: Composition-based stats. Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 6/216 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M V++ + H I+R + LL ++++V + ++ R I + D+++MDI +P Sbjct: 1 MNKIKVLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREAIKMVEELAPDVVLMDISMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 +G +++K+ VK+L LS S Y ++AGA+G++ K + D+ A+ Sbjct: 61 ELNGMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHAA 120 Query: 121 LSGYTFFPSETLNYIKSNKCST------NSSTVTVLSNREVTILRYLVSGLSNKEIADKL 174 +G F + N + +LS RE +L+ + G +N+EIA L Sbjct: 121 HAGDCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGHL 180 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S KTV AH+++I KLGL+ EL YA L+ Sbjct: 181 YISPKTVEAHRNHIQKKLGLNGTAELTKYAIRKGLV 216 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 302 bits (775), Expect = 5e-81, Method: Composition-based stats. Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 14/222 (6%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 T ++++D H + R I+ +L + ++V + D + + D++IMDI++P Sbjct: 36 KTRIVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEALALVERYKPDVVIMDINMPHV 95 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +G +++ + KV+ LS + Y A+Q GA G++ K D + + AV+++ Sbjct: 96 NGVEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRVVAE 155 Query: 123 GYTFFPSETLNYIKSNKCS--------------TNSSTVTVLSNREVTILRYLVSGLSNK 168 G ++ + + + +L+ RE +L+ L G SNK Sbjct: 156 GGSYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGKSNK 215 Query: 169 EIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 IAD L +S KTV H SNI KL ++ + + A + Sbjct: 216 GIADALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKNGWV 257 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 301 bits (773), Expect = 9e-81, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 4/212 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 + +++I D H ++R I +L+ +LQ+V + + I+ R +IIMDI++PG Sbjct: 5 EKITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEAIEMTRRYQPQVIIMDINMPG 64 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G K I+Q + +L L+ + Y +++G +G+V K ++ AV + Sbjct: 65 LNGIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQAVYQVA 124 Query: 122 SGYTFFPSETLNYIKS----NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 G + K T + L+ RE IL ++ G SN+EIA +L +S Sbjct: 125 RGARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIARELFIS 184 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 KTV H ++I+ K+G+ + YA + L Sbjct: 185 EKTVKNHLTHIFHKIGVSDRTQAALYALKHGL 216 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 298 bits (766), Expect = 6e-80, Method: Composition-based stats. Identities = 60/211 (28%), Positives = 109/211 (51%), Gaps = 2/211 (0%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +P +++++D HP++R LL+ ++L++V + + I R D+I+MD+ +PG Sbjct: 13 RPITLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKARQLMPDVILMDVSMPG 72 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G + IK + V +L L+S + Y ++AGA G++ K ++++ AV+ + Sbjct: 73 MNGIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVRAVA 132 Query: 122 SGYTFFPSETLNYIKSNKC--STNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 +G + + T + LS RE+ +LR +G +NKEIA L +S + Sbjct: 133 AGESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDISPR 192 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H +NI+ KLG+ S E + Y I Sbjct: 193 TVQVHLANIFSKLGVGSRTEAVLYGIKRGWI 223 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 295 bits (758), Expect = 6e-79, Method: Composition-based stats. Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 12/222 (5%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M P +++I+D HP+ R I L++N + IV + D + D+I++D+ LP Sbjct: 1 MSPINILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLADELSPDVILVDLSLP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G +G + +K+ Q V+ L+ + AI+AGA+ + +K + + + + Sbjct: 61 GMNGLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVITRV 120 Query: 121 LSGYTFFP------SETLNYIKSNKC------STNSSTVTVLSNREVTILRYLVSGLSNK 168 G + + T+S + L+ RE+ IL + G SNK Sbjct: 121 ARGEYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGYSNK 180 Query: 169 EIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 EIA L +S++TV H ++I KL ++ + + YA + I Sbjct: 181 EIAQALNISDQTVKNHITSILRKLAVNDRTQAVIYALRHGWI 222 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 294 bits (754), Expect = 1e-78, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 5/213 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K +V+I D H ++R ++ +++ +++++ D + + D++++DI +P Sbjct: 9 KKINVLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKTQQLSPDVVLLDISMPK 68 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G L+R+K + ST+K++ L+ + Y I GANG+V K + + A++ + Sbjct: 69 QNGIQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIRDVY 128 Query: 122 SGYTFFPSETLNYIKSNKCSTN-----SSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 G + + + L+ RE +L L G++NKEI D L + Sbjct: 129 QGLNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGDCLFI 188 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 S KTV H SNI+ K+ ++ + YA + + Sbjct: 189 SEKTVKNHVSNIFKKINVNDRTQAAIYAYKHNI 221 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 293 bits (751), Expect = 3e-78, Method: Composition-based stats. Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 1/209 (0%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +P V+++D HP++R + LL++ ++V + D I + + D+++MD+ +PG Sbjct: 17 EPIRVLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPG 76 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G + + + + VL L+ + A++AGA G+V K D ND AV+ + Sbjct: 77 VTGIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAVA 136 Query: 122 SGYTFFPSETLNYIKSNKCS-TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 G + I+ + S L+ RE IL L SG SN EIA +L LS KT Sbjct: 137 RGEAVYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLSQKT 196 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 V H ++I+ KL + + + A+ L Sbjct: 197 VKNHLTSIFAKLQVADRTQAVVRARRAGL 225 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 293 bits (751), Expect = 3e-78, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 105/212 (49%), Gaps = 3/212 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 + V+I+D H + R + L++ + +++V + + + + + D+++MDI++PG Sbjct: 26 RRIRVLIVDDHDLFREGLRQLIETDPAIEVVGEAANGQDALKMVAELQPDVVLMDINMPG 85 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG + I Q V VL L+ + Y AI+AGA ++ K + ++ A+ + Sbjct: 86 MDGIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLRAIHVAA 145 Query: 122 SGYTFFPSETLNYIK---SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 G + + + + LS+RE+T+LR L G +N++IAD L L+ Sbjct: 146 EGGATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADALNLAE 205 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV + S ++ KLG+ + + YA + L+ Sbjct: 206 STVKNNLSALFQKLGVRDRTQAVIYAISHGLV 237 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 292 bits (749), Expect = 5e-78, Method: Composition-based stats. Identities = 55/215 (25%), Positives = 107/215 (49%), Gaps = 7/215 (3%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P V++ D H + R +E++L++ ++Q+V + D + D++++D+ +P Sbjct: 86 PIKVLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETLPDVVLLDVRMPKR 145 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G IK++ + K++ L+ E AI+AGA G++ K +++ A++ + Sbjct: 146 TGIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIRAVHG 205 Query: 123 GYTFFPSETLNYIKSNKCS-------TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 G + + + + S + L+ RE+ +LR + GL+N++IA +L Sbjct: 206 GQSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQLF 265 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S TV H NI KL LHS +E + YA +L+ Sbjct: 266 ISENTVKNHVRNILEKLQLHSRMEAVVYAVREKLL 300 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 292 bits (749), Expect = 6e-78, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 105/206 (50%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 +++++ H I+R + L+ E +IV + ++ + ++RT D+++MD+ +P Sbjct: 14 KIKLLLVEDHHIVRRGLVFFLKTREEFEIVGEAENGEDALTFVRTERPDVVLMDLSMPKM 73 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG K+IKQ T+K+L LSS SE Y A++AGA+G+ K + ++ I Sbjct: 74 DGIEATKQIKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIAIYE 133 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G F + + + ++L+ RE +L+ + G SNKEIA +L ++ +TV Sbjct: 134 GNANFHPKVTPALLGRSAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQTVK 193 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYE 208 H SNI KL + + YA + Sbjct: 194 THVSNILAKLEVDDRTQAALYAVKHG 219 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 289 bits (741), Expect = 5e-77, Method: Composition-based stats. Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 6/216 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M T +++ D H + R + LL +++++ + + + + D+++MDI + Sbjct: 1 MSKTKILLTDDHTLFRQGVRTLLAAEADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMA 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G F + I++ + VKV+FLS + Y + GANG++ K + + + A++ + Sbjct: 61 GMSSFEATRLIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAIREV 120 Query: 121 LSGYTFFPSETLNYIKSNKC------STNSSTVTVLSNREVTILRYLVSGLSNKEIADKL 174 G ++ L+ + + T S L+ RE IL+ L G S KEIA Sbjct: 121 QRGGSYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAFF 180 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 LS KTV AHK N+ KL +H+ +L+ YA ++I Sbjct: 181 ELSVKTVEAHKFNLMRKLDIHNKAQLVQYAIQKKII 216 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 288 bits (740), Expect = 6e-77, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 113/210 (53%), Gaps = 2/210 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MKPT V++ D H ++R I LL+ ++++V + D T+ +R DL+++D+++P Sbjct: 1 MKPTKVLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G T +K+IK+I +KVL L+ E Y I++GA G++ K ++ A+ + Sbjct: 61 RMGGITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAIDKV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 + G FP T N + + V LS+RE +L L G+SNK+IA +L +S KT Sbjct: 121 IKGDKVFPRSTENEV--REVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEKT 178 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V H SNI KL ++ + + A L+ Sbjct: 179 VKNHVSNILRKLSVNDRTQAVIVALKRGLV 208 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 288 bits (738), Expect = 1e-76, Method: Composition-based stats. Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 3/213 (1%) Query: 1 MKP-TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDL 59 M+ ++++D H +R +I +L+ S++ +V + ++ + D I+MDI+L Sbjct: 1 MRKMIKILVVDDHAFLRDAIRSILEDESDMNVVGEASSGDGVLEKVEACRPDCILMDINL 60 Query: 60 PGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 PG +G + +K+ +VL + Y A+QAGA+G++ K + + A++M Sbjct: 61 PGKNGIEATELVKKNYPNCRVLVFTMYEHDEYLMDALQAGADGYLLKDSSSEQVVAAIRM 120 Query: 120 ILSGYTFFPSETLNYIK--SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 + G + + + S L+ RE IL LV GLSNKEIA+ L +S Sbjct: 121 LYRGDSVIHPRMTKKLITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEALYIS 180 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +KTV H + I+ KL + S + + YA +L+ Sbjct: 181 DKTVKIHINKIFKKLNVKSRSQAVIYAVRNQLV 213 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 287 bits (737), Expect = 1e-76, Method: Composition-based stats. Identities = 60/209 (28%), Positives = 107/209 (51%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 KP V+++D H ++ L++ E+++V + ++ ++ D+++MD+ +P Sbjct: 7 KPIRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPI 66 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G + IK+ KVL L+ Y + +QAGA G++ K + A++ + Sbjct: 67 MNGIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVH 126 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 G T+F T + + S + ++ LS RE ILR + G S+K+IA L +S +TV Sbjct: 127 QGATYFCESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNISYRTV 186 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 H+ NI KL +HS EL YA + L+ Sbjct: 187 ETHRQNIKHKLDIHSTAELAQYALQHGLL 215 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 287 bits (735), Expect = 2e-76, Method: Composition-based stats. Identities = 54/206 (26%), Positives = 104/206 (50%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 VII D H ++R + +L++ S+ ++V + +R +I++D+ +PG + Sbjct: 2 IRVIIADDHTVVRNGLRHILERTSDFEVVGEAARGTEVPQLVRELSPHVILLDLSMPGRN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +++++ +++L L+ +E Y RA +AGA G+++K + ++ A++ + +G Sbjct: 62 GLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAAGYLTKESAATELVEALRKVAAG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 T+ + + LS+RE+ + R +V G S +IA L +S KTVS Sbjct: 122 GTYVSPAMAEKLALGLQEKPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSAKTVST 181 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYEL 209 +K + KL L S L+ YA L Sbjct: 182 YKMRLMEKLQLRSDAALVRYAIEARL 207 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 287 bits (735), Expect = 3e-76, Method: Composition-based stats. Identities = 63/215 (29%), Positives = 109/215 (50%), Gaps = 5/215 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MK +++ D H ++R + +LL+ + Q++ D R + D+++MD+ +P Sbjct: 1 MKTIRILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G +G ++I ++FLS S+ Y +A++AGA ++ K + ++D+ AV + Sbjct: 61 GLNGIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIAV 120 Query: 121 LSGYTFFPSETL-----NYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 G FF +Y++ + + +L+ RE +L+ L G +NKE+A L Sbjct: 121 SEGKAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAILN 180 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 LS TV H+ NI KL LHS ELI YA +I Sbjct: 181 LSLYTVETHRGNILQKLNLHSGAELILYAIRKGVI 215 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 285 bits (732), Expect = 5e-76, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 110/207 (53%), Gaps = 1/207 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D H ++R + L+ ++++V + D I D+I+MDI +PGTD Sbjct: 8 VRVLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARAEELRPDVILMDIKMPGTD 67 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G L+R++++ + +VL ++S +E A++AGA G+V K D + + A++ + +G Sbjct: 68 GIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRSVHAG 127 Query: 124 YTFFPSETLNYIK-SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + E + + +SS L++RE +L ++ G SN+EIA L+LS KTV Sbjct: 128 HVLLQPEVAVALLTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSEKTVK 187 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYEL 209 H SNI KL + + +A + + Sbjct: 188 THVSNILMKLDVADRTQAALWAVRHGI 214 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 285 bits (730), Expect = 8e-76, Method: Composition-based stats. Identities = 52/217 (23%), Positives = 98/217 (45%), Gaps = 9/217 (4%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +P V++ D ++R V+L + +++V + D ++ D+++MD+ +P Sbjct: 19 RPLRVVLADDQDLVRAGFRVILSSDDGIEVVGEAGDGWEAVEVATRERADVVLMDVQMPK 78 Query: 62 TDGFTFLKRIK----QIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAV 117 DG +R+ KV+ L++ Y A++AGA+GF+ K D+ +V Sbjct: 79 LDGLEATRRLLGPAGADHP-TKVIILTTFDREDYLFEALRAGASGFLLKNASPEDLIESV 137 Query: 118 QMILSGYTFFPSETLNYIKSNKCST----NSSTVTVLSNREVTILRYLVSGLSNKEIADK 173 +++ G E + + + + + L++RE +L L G SN EIA + Sbjct: 138 RIVARGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAKGASNAEIARQ 197 Query: 174 LLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 L+L TV H S I KL L + +A ++ Sbjct: 198 LVLGETTVKTHVSRILTKLNLRDRTHAVVFAYENGIV 234 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 284 bits (729), Expect = 1e-75, Method: Composition-based stats. Identities = 54/216 (25%), Positives = 106/216 (49%), Gaps = 6/216 (2%) Query: 1 MKP-TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDL 59 M ++I D H +IR + +L + +V + + + +DY PVD+++MDI++ Sbjct: 1 MNTSIKLLIADDHILIREGLRKILSIEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDINM 60 Query: 60 PGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 P +G ++IK++ + ++ L+ + Y I+ G +G+V K + + + Sbjct: 61 PIMNGIEACRQIKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTILG 120 Query: 120 ILSGYTFFPSETLNYIKSNKCSTNSSTVTV-----LSNREVTILRYLVSGLSNKEIADKL 174 + G +F P + + +S + L+ RE+ +L+ + G SNK IA+ L Sbjct: 121 VAQGESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANAL 180 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S KTV H +NI+ K+G+ + YA +L+ Sbjct: 181 YISEKTVKNHLTNIFQKIGVADRTQAALYAIKEKLV 216 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 283 bits (727), Expect = 2e-75, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 6/212 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D H + R + +L+ + +V + + R I+ +T D+ ++DI +P + Sbjct: 10 IKVLVVDDHELFRRGVVTVLRSTPGIYVVGEAGNGREAIECFQTLQPDVTLLDIHMPVCN 69 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +++++ K+L L+ A+++GA+G+V K + V+ + G Sbjct: 70 GLETARKMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECVRQVYEG 129 Query: 124 YTFFPSETLNYIKSNKCS------TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 PS + + +S +VT L+ RE +L+YL +G SNKEIA L +S Sbjct: 130 EPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIARALFIS 189 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 TV H +I KL L + + YA + Sbjct: 190 ENTVRNHVRHILDKLHLSNRAQAAAYAVRNGI 221 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 283 bits (726), Expect = 2e-75, Method: Composition-based stats. Identities = 58/210 (27%), Positives = 112/210 (53%), Gaps = 7/210 (3%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 P ++I+D +IR ++ +L++ +L++V ++ ++ ++ + D+++MDI +P Sbjct: 7 SPIRLLIVDDQSLIRQGLKAMLEQEPDLEVVGDAENGKVALELVAELQPDVVLMDIRMPE 66 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG T K I Q +KVL LS+ + Y A++AGA G++ K +++ A++ Sbjct: 67 MDGRTATKLIMQSFPNIKVLVLSTFDDDSYLTGAMRAGAKGYLLKDMPSSELADAIRFGH 126 Query: 122 SGYTFFPSETLNYI-------KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKL 174 SGYT F + + S ++ SS + ++ RE +L + G +N+EIA +L Sbjct: 127 SGYTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGATNREIAQQL 186 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 ++ TV H ++I +L L + +L YA Sbjct: 187 YITEGTVKTHVTSILSRLNLKNRSQLAIYA 216 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 283 bits (726), Expect = 2e-75, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 100/226 (44%), Gaps = 17/226 (7%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 ++I+D H + R ++ +L E ++V +D ++ + D+I+MDI++P Sbjct: 8 NKIQIVIIDDHQLFREGVKRILAMEPEFEVVADGEDGENAVELVEKYNPDVILMDINMPK 67 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G + + Q VKVL LS + Y ++ GA+G++ K D + + AV+++ Sbjct: 68 VNGVEATRDLIQRYPDVKVLVLSIHDDESYVTHVLKTGASGYLLKEMDADALIEAVKVVA 127 Query: 122 SGYTFFPSETLNYIKSNKCS-----------------TNSSTVTVLSNREVTILRYLVSG 164 G + + + + + +L+ RE +L+ + G Sbjct: 128 QGGAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECEVLQLMTDG 187 Query: 165 LSNKEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 SN+ I + L +S KTV H SNI K+ ++ + + + + Sbjct: 188 YSNRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAVVESIKNGWV 233 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 283 bits (725), Expect = 3e-75, Method: Composition-based stats. Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 3/212 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 P ++I+D HPI+R + + ++V + D + D+++MD+ +P Sbjct: 10 SPLRLLIVDDHPIVRDGLRGVFDGEDGFEVVGEASDGAQALVRAAESGPDVVLMDLRMPT 69 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G ++R++ Q V+VL L++ AI+AGA G++ K + D+ AV+ Sbjct: 70 MGGVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGATGYLLKDAPREDLIRAVRAAA 129 Query: 122 SGYTFFPSETLNYIKSNKCST---NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 +G + + + + L+ RE+ +LR + SG +N+E A KL +S Sbjct: 130 AGQPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLFISE 189 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H + Y K G+ + A L+ Sbjct: 190 ATVKTHLLHAYAKFGVRDRAAAVAEAYKRGLL 221 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 283 bits (725), Expect = 3e-75, Method: Composition-based stats. Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 6/208 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 ++++D H I+R + LL +++ + D I R D+ IMD+ LP Sbjct: 9 TIRILVVDDHHIVRQGLVALLNTLPGFEVIAEAGDGVEAIALHREHQPDITIMDLRLPRM 68 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +G + RI++ +++ L++ RA+QAGA G++ K D +D+ A++ + + Sbjct: 69 NGVEAITRIREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDLTAAIRSVHA 128 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G + P+ + + L+ RE+ +LR +V G SN+EIA L +S TV Sbjct: 129 GKSRIPTVVAERLAERMSGSE------LTARELDVLRLIVQGRSNREIAADLHISEATVK 182 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 H +N+ KLG+ + A L+ Sbjct: 183 THINNLLSKLGVSDRTQAATTALQRGLV 210 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 283 bits (725), Expect = 4e-75, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 5/212 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP-GT 62 V I D H ++R ++ ++++V + D + D + ++++DI +P G Sbjct: 2 IDVAIADDHAVVRQGFAFIINSQCDMRVVGEAADGKEAYDLVARVEPHVLLLDISMPPGE 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +G +RI + +++ L+ E Y ++ GA G+V K + + A++ + + Sbjct: 62 NGLIACERISCDFPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKVAT 121 Query: 123 GYTFFPSETLN----YIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 G T+ + + LS+RE I L G +NKE ADKL +S Sbjct: 122 GETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFISV 181 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 KTV H+S IY KLG++S EL+ A Y L+ Sbjct: 182 KTVETHRSKIYAKLGVNSRAELVHLALKYHLL 213 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 282 bits (723), Expect = 5e-75, Method: Composition-based stats. Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 6/214 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P V+I++ ++R + LL +++V + D ++ L +++++D+ +P Sbjct: 4 PVRVMIVEDQALMREGLRTLLDLEEGVEVVGEAADGVEALERLPGARPEVVLVDVRMPRM 63 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG ++R+ + V + L++ + Y R ++AGA G++ K ++ A++ + Sbjct: 64 DGIQLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGARGYILKDTPSEELAAAIEKVHR 123 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTV------LSNREVTILRYLVSGLSNKEIADKLLL 176 G + S + LS RE+ +LR + SG SN+EIA L + Sbjct: 124 GEAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIARALYI 183 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 + TV H S+I KLG + YA I Sbjct: 184 TEGTVKNHISSILRKLGFRDRTQAALYALERGWI 217 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 282 bits (723), Expect = 6e-75, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 101/219 (46%), Gaps = 10/219 (4%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K +++ D H + R ++ +L +L + + + +D ++ ++I+MDI++P Sbjct: 8 KTIRILLADDHALFRQGLKKILDMEEDLAVCGEAQNGEEVVDKVKLLKPNIILMDINMPL 67 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G K +K++ KV+ L+ + Y ++ GA GF+ K + + A+Q + Sbjct: 68 LNGVEATKYVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPTLVQAIQEVN 127 Query: 122 SGYTFFPSETLNYIKSNKCS----------TNSSTVTVLSNREVTILRYLVSGLSNKEIA 171 G +F + + ++ + + L+ RE IL + G +NKEI+ Sbjct: 128 KGNSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYTNKEIS 187 Query: 172 DKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +L +S KTV H SNI K+ + + + A ++ Sbjct: 188 KELYISEKTVKNHVSNILRKMDVTDRTQAVITALKCGVV 226 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 282 bits (722), Expect = 7e-75, Method: Composition-based stats. Identities = 58/215 (26%), Positives = 107/215 (49%), Gaps = 9/215 (4%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP-GTD 63 ++I D H ++R ++L ++++V D + D++I+D+ +P G Sbjct: 2 KIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGES 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +I + K+L L+ + Y +++GA G++ K + + AV+ + G Sbjct: 62 GLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVYQG 121 Query: 124 YTFFPSETLNYIKSN--------KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 T+ + + + + S++S +LS RE+ IL + G NK+IA+KL Sbjct: 122 ETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEKLF 181 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S KTV AHK++I KL L S EL++YA +L+ Sbjct: 182 VSVKTVEAHKTHIMTKLNLKSKPELVEYALKKKLL 216 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 282 bits (722), Expect = 7e-75, Method: Composition-based stats. Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 8/216 (3%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRT-----RPVDLIIMDI 57 T +++ D H ++R + ++L +L +V + D I+ +R + VDL ++D+ Sbjct: 27 KTRILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVLDV 86 Query: 58 DLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAV 117 +P G + + ++ +++L L+ Y A++AGA G+V K D+ A Sbjct: 87 AMPRMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQAC 146 Query: 118 QMILSGYTFFPSETLNYIKS---NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKL 174 + + G F ++ + + T L+ RE IL+ + G S++EIAD L Sbjct: 147 RAAVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIADTL 206 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S KTV H++NI KLG+ +EL YA LI Sbjct: 207 FISVKTVERHRANILAKLGMKDRLELTRYAIRTGLI 242 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 282 bits (722), Expect = 7e-75, Method: Composition-based stats. Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 5/214 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 + V++++ H I+R ++ LL +L++V + D R ++ D+++MDI++P Sbjct: 3 QTVRVLLVEDHTIVREGLKALLTATEDLEVVGEVADGRAAVEAAERLAPDVVVMDINMPK 62 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG + I++ + +VL LS Y AI+AGA+G++ K + +D+ A++ + Sbjct: 63 LDGVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIREVA 122 Query: 122 SGYTFFPSETLNYIKS-----NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 G FF + L+ RE +L + G S+ EIA L L Sbjct: 123 GGNAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKILGL 182 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S KT+ H+ I KLG+H++ L+ A L+ Sbjct: 183 SVKTIEGHRGRIMAKLGVHNVAGLVRQAIRIGLV 216 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 282 bits (722), Expect = 8e-75, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 112/210 (53%), Gaps = 4/210 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +V++ D H I+R + LL+ + + +V + ++ + TI R ++IIMDI +P + Sbjct: 3 VNVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARELHPEIIIMDISMPDMN 62 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++I +KV+ LS ++ + ++AGA+G++ K ++ +A+Q +LS Sbjct: 63 GIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQTVLSN 122 Query: 124 YTFFPSETLNYIKSNKCSTNSST----VTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 +T+ + + N + T + L+ RE +L+ L GLS K+IA L +S K Sbjct: 123 HTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLHVSVK 182 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 TV H+ NI KLG+ S+ ELI YA L Sbjct: 183 TVETHRRNITQKLGVGSVAELIKYAIREGL 212 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 282 bits (722), Expect = 8e-75, Method: Composition-based stats. Identities = 59/213 (27%), Positives = 109/213 (51%), Gaps = 4/213 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K SV+++D H + R ++ LL+ +++++ + D R D+I+MDI +PG Sbjct: 21 KAISVLLVDDHVLFRQALRHLLEAEPDIRVIGEAGDGRSAQQLAERFHPDVILMDISMPG 80 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG T + +K K++ L+ +E + RAI+AGA+ ++ K ++ + + A++ + Sbjct: 81 VDGVTATRDLKAGIPNTKIIILTMFAEDGHVIRAIRAGADAYLLKNSESSKVIDAIRAVA 140 Query: 122 SGYTFFPSETLNYIKSNKCS----TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 G + + + + TV L+ RE+ +LR + SG+SNKEIA +L L+ Sbjct: 141 RGESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEIAAELSLA 200 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV S ++ KL + + YA + LI Sbjct: 201 ESTVKNRLSLLFEKLDVKDRTQAAIYALSHGLI 233 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 281 bits (721), Expect = 8e-75, Method: Composition-based stats. Identities = 51/210 (24%), Positives = 101/210 (48%), Gaps = 3/210 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V++ D H I+R + LL K+++ +V + + ++ + ++DI +P + Sbjct: 2 IRVMLADDHTILRQGLVSLLSKDADCTVVAEASNGLEAVEKALETRPQVAVIDISMPELN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +KRI K+L L+ E Y ++AGA+G++ K + ++ AV+ + +G Sbjct: 62 GMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKALATG 121 Query: 124 YTFFPSETLNYIKSNKCSTNS---STVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 T++ + + + + L+ RE + +V G + K+IA L +S KT Sbjct: 122 KTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDISVKT 181 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 H+ + KLG+ + EL+ YA + L+ Sbjct: 182 AENHRGKVLDKLGVSNTAELVRYAAKHNLL 211 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 280 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 2/209 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D H ++RM + L+ +++++ + D + D+I+MD+ + G D Sbjct: 2 IRVLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVELSPDVILMDLVMEGMD 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G K+I + S K++ L+S + I+AGA ++ K + +I A++ G Sbjct: 62 GIEATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAASKG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSS--TVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 S+ + S + + L+ RE+ IL + G +NKEI ++L ++ KTV Sbjct: 122 EPKLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFITIKTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 H +NI KL + + YA L+ Sbjct: 182 KTHITNILSKLDVSDRTQAAVYAHRNHLV 210 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 280 bits (718), Expect = 2e-74, Method: Composition-based stats. Identities = 52/212 (24%), Positives = 101/212 (47%), Gaps = 2/212 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MK V+I+D H ++R + ++L ++++V + D I + D++++DI +P Sbjct: 1 MKKIKVLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGGIAMAQKMRPDVVLLDISMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G LK + Q ++V+ L+ + Y GA G+V K + ++ AV+ + Sbjct: 61 EMSGLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAVRAV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTN--SSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 SG + + + LS++E +L + +G +N+EIA++L++S Sbjct: 121 YSGEMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLVISV 180 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 KTV +K I KL +L+ +A L+ Sbjct: 181 KTVETYKYRIMEKLNCKKRSDLVKFALDNGLL 212 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 49/209 (23%), Positives = 98/209 (46%), Gaps = 6/209 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 KP ++++D H ++R + L +L +V + + + R D+++MD+ LPG Sbjct: 5 KPIRILVVDDHHVVRSGLAASLGLEDDLNVVGEAGNAGEAVTQFRKHHPDVVLMDLRLPG 64 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G +++ +VL ++ RA+QAGA G++ K + ++ A++ + Sbjct: 65 ANGTAATADLRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAIRAVA 124 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 +G + + + + S+RE +L+ + G +NKEIA L +S +TV Sbjct: 125 AGERHLSAALAQRLAGRVAAPDV------SDREREVLQLIARGKANKEIAAALGISEETV 178 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 H SN++ K+G+ + LI Sbjct: 179 KRHASNLFVKMGVADRAQATSEGIRRGLI 207 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 57/214 (26%), Positives = 106/214 (49%), Gaps = 5/214 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K V++ D HP++R + L ++IV + D + T+ +R ++++MD+D+P Sbjct: 17 KTIKVLLADDHPVVRKGLGSCLNNLEHIEIVGEAVDGQETVSKVRELSPEIVLMDLDMPT 76 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G K I++ VKVL LS + Y + I++GA G+V K ++ A++ + Sbjct: 77 MSGLEATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELVRAIESVH 136 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTV-----LSNREVTILRYLVSGLSNKEIADKLLL 176 G FF + + + ++ L+NRE +L + G SNKE+A ++ + Sbjct: 137 GGGAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMASRMGV 196 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +TV H+ + KL +H++ L YA + +I Sbjct: 197 GVRTVETHRERVMNKLDIHNVAGLTKYAIAHGII 230 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 115/213 (53%), Gaps = 4/213 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 ++I + H ++R ++ L+ SE Q+V + D+ I+ R DLI++D+ +P Sbjct: 4 STIKILITEDHALVRKGLKSLISSRSEFQVVGEADNGLAAIEMTRKCKPDLILLDLSMPK 63 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G ++++K+ + VK+L ++ + Y A++ GA+G++ K +D ++F A++ I+ Sbjct: 64 MNGLATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAIRAIM 123 Query: 122 SGYTFFPSETLNYIKSN----KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 G + S+ + + + + L+ RE + + + G +N++IAD L +S Sbjct: 124 DGKAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADLLFIS 183 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 KTV H++N+ KL LHS E+ ++A +I Sbjct: 184 PKTVDKHRTNLMKKLDLHSAREVSNFALKNGII 216 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 279 bits (716), Expect = 4e-74, Method: Composition-based stats. Identities = 50/210 (23%), Positives = 103/210 (49%), Gaps = 4/210 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D H I+R+ + L ++++V + + + ++ D+I+MD+ +P D Sbjct: 5 IKVLLVDDHDIVRIGVRSFLGSFDDIKVVGEAANGQEAVEMTAELSPDIILMDMLMPVMD 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++ I+ + +++ L+S + AI+AGA G++ K + +++ A++ + G Sbjct: 65 GIQAIREIRDRKLPGRIIALTSFATDDKLFPAIKAGAMGYLLKDSTPDELLEAIRRVHRG 124 Query: 124 YTFFPSETLNYIKSNKCST----NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 + + S + T L+ RE+ L+ + G SNK IA+++ +S Sbjct: 125 EPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEMFVSEA 184 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 TV H ++I KL L + VE YA + Sbjct: 185 TVRTHMTSILSKLHLANRVEATLYALREGI 214 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 279 bits (716), Expect = 4e-74, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 4/211 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 + V+I D HP+ R + LL+ +++V + + + D+++MD+ +PG Sbjct: 8 EAIRVLITDDHPVFRQGLRGLLEAL-GVEVVGEAESGPQAVQLAAELQPDVVVMDLHMPG 66 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G + I + + VL L+ + A++AGA G++ K + +I AV+ + Sbjct: 67 GNGIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAVRAVA 126 Query: 122 SGYTFFPSETLNYIK---SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 +G + E + ++ + L+ RE +L+ + G SN EIA L LS Sbjct: 127 AGEAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLFLSP 186 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 KTV H SNI+ KL + + I A+ L Sbjct: 187 KTVRNHVSNIFMKLHVADRAQAIVLAREAGL 217 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 279 bits (716), Expect = 4e-74, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 99/208 (47%), Gaps = 6/208 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 V+I D H I R + ++ ++ E+Q+V + ++ I D+ +MD+ +P Sbjct: 6 TIRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDLRMPEV 65 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +G + I + +++ L++ R +QAGA G++ K + +++ +A++ + Sbjct: 66 EGVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHR 125 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G+ + P + + + LS RE+ +LR L G+SN +IAD L + TV Sbjct: 126 GHKYIPPDVGAKLVQRLSNPE------LSERELEVLRSLAQGMSNADIADALSIGEGTVK 179 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 +H + I KL + + + A ++ Sbjct: 180 SHVNRILNKLDVSDRTQAVIVAVKRGIV 207 >UniRef50_A0K2I9 Two component transcriptional regulator, LuxR family n=5 Tax=Actinomycetales RepID=A0K2I9_ARTS2 Length = 250 Score = 279 bits (715), Expect = 5e-74, Method: Composition-based stats. Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 30/238 (12%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P V+++D P++RM ++L+ +L+IV + D I +R D+++MD+ +P Sbjct: 6 PIKVLLVDDQPLLRMGFRLILEGEDDLRIVGEASDGAEAIRQVREVDPDVVLMDVRMPVL 65 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG + + S KV+ L++ YA +QAGA+ F+ K +++ AV+++ S Sbjct: 66 DGIEATRAVTSSGSHAKVIILTTFDLDEYAFAGLQAGASAFLLKDVAPSELVSAVRVVAS 125 Query: 123 GYTFFPSETLNYIKSNKCSTNSST------------------------------VTVLSN 152 G + + + L+ Sbjct: 126 GDAVVAPRVTRRLLEAYVREGNPPAVNGQRAGTSAPAAGRGRHSLGEEQQRDPLLEALTP 185 Query: 153 REVTILRYLVSGLSNKEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 RE+ +L + GLSN EIA + LS TV H I KL L V+ + YA L+ Sbjct: 186 REMEMLEAMAEGLSNAEIAHRFFLSEATVKTHVRRILAKLHLRDRVQAVVYAYETGLV 243 >UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria (class) RepID=D2AX12_STRRD Length = 239 Score = 278 bits (714), Expect = 6e-74, Method: Composition-based stats. Identities = 50/213 (23%), Positives = 99/213 (46%), Gaps = 6/213 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I+D P++R + ++L + ++V + ++ + R D+++MDI +P D Sbjct: 11 IRVLIVDDQPLVRRGLSLILSPDPSFEVVGEAENGAQAVTLARRLRPDVVVMDIRMPVLD 70 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + + +VL LS+ Y A++AGA GF+ K + D+ A++ + +G Sbjct: 71 GVGATRELAATVPDCRVLALSTFDLDEYVVGALRAGAYGFLPKDSSPEDLSAAIRTVHAG 130 Query: 124 YTFFPSETLNYIKS------NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 L + S + + + L+ REV + R + +GL N I+ L +S Sbjct: 131 EAAVAPRLLTRLISTYVRAPHGTRPTPTGLGELTPREVEVWRLMATGLDNTGISRTLDIS 190 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV + ++I+ KL + + + A L+ Sbjct: 191 LSTVKNYITSIFDKLAVRDRAQAVIVAYESGLV 223 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 278 bits (714), Expect = 6e-74, Method: Composition-based stats. Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 2/211 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M V I D HP++R ++ LL ++ + + ID D+ ++D +P Sbjct: 1 MNM-RVFIADDHPVVRQGLKQLLGAEADFSVAGEASSGHEVIDQCGRFAWDVAVLDYRMP 59 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G G +K ++Q VL LS E YA R ++AGA G+++K + D+ +A++ + Sbjct: 60 GKGGIDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAAGYLTKESAPEDLVNAIRKV 119 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVT-VLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 G F + + + + + LS+RE I+ L SG EIA +L LS Sbjct: 120 ARGGRFVSAALGEQLALSLSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLSPN 179 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 T+S ++ I KL L S EL+ YA ++L+ Sbjct: 180 TISTYRKRILEKLDLKSNAELMRYAIGHQLV 210 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 278 bits (714), Expect = 6e-74, Method: Composition-based stats. Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 5/215 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M S++++D H + R + LL + +V + ++ R D+++MDIDLP Sbjct: 1 MSQISLLLVDDHALFREGLASLLSYQPDFTVVGEAASGEEAVERARELVPDVVLMDIDLP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G DG +RIK+ V+V+ L+ + ++I+AGA G++ K ++ ++ + Sbjct: 61 GIDGIEATRRIKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQLRGL 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNS-----STVTVLSNREVTILRYLVSGLSNKEIADKLL 175 G I LS REV +L + LSNKEIA +L Sbjct: 121 ARGEAAISRRMAARILEEFARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIAARLS 180 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S TV H NI KL L S + YA + LI Sbjct: 181 ISEHTVKNHLKNILAKLQLSSRRQAAAYAVAHGLI 215 >UniRef50_D1VBH1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=D1VBH1_9ACTO Length = 248 Score = 278 bits (714), Expect = 6e-74, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 93/218 (42%), Gaps = 9/218 (4%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 P V+I D ++R L++ +L +V + D + R D+++MDI +P Sbjct: 24 SPIRVLIADDEGLVRAGFRALVEATPDLTVVAEAADGVAAVRESRRLRPDVVLMDIRMPV 83 Query: 62 TDGFTFLKRIKQI--QSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 +G + I + +L +++ + Y A++AGA GF+ K ++ A++ Sbjct: 84 MNGLEATRLIAADAVRPGPGILVVTTFDDDEYVFEALRAGAAGFILKDTQPENLLAAIRT 143 Query: 120 ILSGYTFFPSETLNYIKSNKCSTNSSTVTV-------LSNREVTILRYLVSGLSNKEIAD 172 + +G + + + + L++RE +L + +G SN EIA Sbjct: 144 VAAGDALLAPGVTRRLIAAFVRVPAPPASPLTGLASTLTDRERAVLTQIANGYSNAEIAQ 203 Query: 173 KLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 L +S TV H ++ KL +L+ A L+ Sbjct: 204 ALYVSVSTVKTHVGHLLAKLAARDRAQLVIAAYESGLV 241 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 278 bits (714), Expect = 7e-74, Method: Composition-based stats. Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 5/215 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M V++ D H ++R + LL ++QIV + R + + D+I+MDI +P Sbjct: 28 MPNIRVLLADDHTVVRQGLRALLSGEKDIQIVGEAGTGREAVQMAQKLTPDVILMDIAMP 87 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 +G ++I ++ + KVL LSS E Y + +AGA+G++ K ND+ AV+ Sbjct: 88 LMNGLEATRKIAEVAPSAKVLVLSSYGEDDYVQKLTEAGASGYLIKHAAANDLVAAVRET 147 Query: 121 LSGYTFFPSETLNYIKSNKCST-----NSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 G FF ++ + + L+ RE+ L ++V+G NK IA + Sbjct: 148 HKGNAFFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGKPNKVIACDMG 207 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S KTV H+ + KL +H + L YA +I Sbjct: 208 ISIKTVEKHRQQVMNKLNIHEVASLTRYAIAKGMI 242 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 278 bits (713), Expect = 9e-74, Method: Composition-based stats. Identities = 55/214 (25%), Positives = 109/214 (50%), Gaps = 7/214 (3%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP-GT 62 V+++D H ++R + LL++ ++++V +T + ++++MD+ L G Sbjct: 3 IRVMLVDDHALVREGLRALLEREGDIEVVGETGSAAGVLALAEESRPEVVVMDLQLGAGR 62 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +G + + + + +KV+ LS + RA+++GA G+V K ++ A++++ Sbjct: 63 NGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLVAR 122 Query: 123 GYTFFPSETLNYIKSN------KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 G + + + + L+ RE+ +LR GL+N EIA +L++ Sbjct: 123 GEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRLVI 182 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S KTV AH++NI KLGLH V+L+ YA ++ Sbjct: 183 SVKTVQAHRANIMQKLGLHDRVDLVKYAIKNGIL 216 >UniRef50_B0C955 Two-component transcriptional regulator, LuxR family n=4 Tax=Cyanobacteria RepID=B0C955_ACAM1 Length = 215 Score = 278 bits (713), Expect = 9e-74, Method: Composition-based stats. Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 4/208 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +++ D + R + LL+ +L +V + D R I +T D+I+MD+ +P D Sbjct: 2 IRLLLADDQALFRQGLASLLELEEDLSVVGQAQDGRDAILLTQTLQPDVILMDVRMPICD 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + I Q +++L L++ E Y ++QAGA G++ K + + A++M+ G Sbjct: 62 GVEATREIHQRFPWIRILVLTTFDEDEYIWTSLQAGALGYLLKSTPASQLAAAIRMLHDG 121 Query: 124 YTFFPSETLNYIKSNKCST----NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 + + + + + LS+RE+ +L + G SN+EI+ L L+ Sbjct: 122 HFQLGPTIAPKVIAQLRPPPLKNEQNHLERLSDRELDVLNLIGQGKSNREISQILHLTEG 181 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLY 207 TV + S + G LG+ + +A+ Y Sbjct: 182 TVKNYVSQLLGSLGVRDRTQAALWAQQY 209 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 277 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 2/209 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++++D HP++R + +L+ +L +V + D + R D+++MD+ +PGTD Sbjct: 2 IRILVVDDHPVVREGLVAILEAQEDLTVVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGTD 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++ IK+I +V+ L++ +A+QAGA+G++ K + DIF AV+++ G Sbjct: 62 GVQAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVVYRG 121 Query: 124 YTFFPSETLNYIKSNKCS--TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + + + L+ RE+ +L + GL NKEIA +L ++ +TV Sbjct: 122 GSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITERTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 H + IY KL + E + A L+ Sbjct: 182 KFHANAIYRKLDVSGRTEAVSKAIQRGLV 210 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 277 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 5/215 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYL----RTRPVDLIIMD 56 M V+I+D H ++RM ++ L ++ +++ + D R ++ L R D+I+MD Sbjct: 10 MSKIKVMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDIILMD 69 Query: 57 IDLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHA 116 + +PG +G K ++ +K++ L+S E +A++AGA +V K ++ +A Sbjct: 70 LMMPGMNGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEELIYA 129 Query: 117 VQMILSGYTFFPSETLNYIKSNKCSTNSSTVTV-LSNREVTILRYLVSGLSNKEIADKLL 175 +Q G E + ++ RE +L + G SNK+IA++L Sbjct: 130 LQGAYRGMPVMTGEVAQALTRGLRQRTVQGDDSGMTEREKEVLLLIAEGKSNKDIAEELH 189 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S KTV H SN+ K L +L YA + Sbjct: 190 ISIKTVKTHVSNLLMKCELEDRTQLAIYAHRQGWV 224 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 6/215 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K +++ D H ++R ++VLL +L+++ + D ID + DL+++D+ +P Sbjct: 3 KKLRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMPK 62 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G ++ + + + +K+L L+ + Y +Q GA G+V K ++ A++ + Sbjct: 63 LNGVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTVA 122 Query: 122 SGYTFFPSETL------NYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 G F + + + S + LS RE+ +LR L G +N++IAD L Sbjct: 123 RGEMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADLLH 182 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S KTV +K+ + KL +H EL+ YA +I Sbjct: 183 VSVKTVETYKARVMEKLEMHKRAELVRYAMENGII 217 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 57/214 (26%), Positives = 113/214 (52%), Gaps = 6/214 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 T ++++D HP+ R ++ +L ++ ++ + DD I+ D+IIMDI +PG Sbjct: 2 KTRIMLVDDHPVFRSGLKHILCTEADYHVIAEADDGESAIEMAAEANPDIIIMDISMPGL 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG + IK+ +++L L+ ++ + ++ AGA+G+V K ++ HAV+++++ Sbjct: 62 DGIEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKLVMN 121 Query: 123 GYTFFPSETLNYI------KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 G + + + + + S +S+ LS RE +L+Y+ G + KEI+ +L + Sbjct: 122 GEHYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTELFI 181 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S KTV +K + K+G L+ YA + +I Sbjct: 182 SIKTVDTYKKRVMEKIGSKKKSALVRYALKHNII 215 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 4/208 (1%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 ++I D H ++R + ++++V + + + DL++MD+ +P DG Sbjct: 2 KIVIADDHHVVRKGLRFFFATQDDIEVVGEAATGLEALRVIEETKPDLVLMDLSMPEMDG 61 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 +K+ Q ++ L+S S+ + A+QAGA + K + ++ + + G Sbjct: 62 IQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKT-RQVHGGE 120 Query: 125 TFFPSETLNYIKSNKC---STNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + + ++ ++ L+ RE +L + +G SNKEIA L +S KTV Sbjct: 121 YKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFISEKTV 180 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYEL 209 H SN+ KL + + +A Y L Sbjct: 181 KTHVSNLLAKLEVADRTQAALFAVKYNL 208 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 106/210 (50%), Gaps = 3/210 (1%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 +++ D H I+R ++ LL + ++++V + + + D+ +MD+ +P Sbjct: 2 TIKILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEALSIAGEIRPDVTVMDVMMPQM 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG +RI + S+ +V+ LS ++ + ++ GA GF+ K ++ AV+ ++ Sbjct: 62 DGIEATRRIVEDGSS-RVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRKVMD 120 Query: 123 GYTFFPSETLNYIKSNKCST--NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 G + + + S+ + + L+ RE IL L G +N+E+A++L LS KT Sbjct: 121 GEIYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLSIKT 180 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V H+ +I KL L ++ +L+ YA +I Sbjct: 181 VGTHRQHIMNKLKLKNLADLVKYAIRNGMI 210 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 9/212 (4%) Query: 7 IIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFT 66 ++ D I+R I +LL +++V D + + + D+++MD+ +P DG Sbjct: 2 VVADDQAIVREGIVMLLGLLPGIEVVGAAKDGDEAVALVAEKAPDVVLMDLRMPRCDGVE 61 Query: 67 FLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTF 126 +RI++ +V+ L++ ++ A+QAGA G+++K +I A+ ++SG Sbjct: 62 ATRRIRKEHPRTQVVVLTTFADDDSLFTALQAGARGYLTKDARGEEIVQAIDAVMSGEAG 121 Query: 127 FPSETLNYIKSNKCSTNSST---------VTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 + + + + L+ RE +L + GLSN+EIA L +S Sbjct: 122 LSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIARALHVS 181 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 TV H +N++ K G + + YA L Sbjct: 182 AATVKTHINNLFAKTGARDRTQAVRYAYGRGL 213 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 1/209 (0%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +P +++ D H ++R + +LL + +V + D ++ PVD+ ++D+ +P Sbjct: 6 EPLRILLADDHRVLRKGLSLLLSSEEDFSVVAEASDGEEALEKAAKTPVDIALLDLSMPH 65 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G L+R+K +Q V+VL L+ SE Y ++AGANG++ K ++F A++ + Sbjct: 66 MGGLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALRTVA 125 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 +G + + LS RE +L +V G S IADKL LS KTV Sbjct: 126 AGGRYLGEREAELLIDGALEEPEEP-AALSTREREVLELIVHGYSLSTIADKLYLSIKTV 184 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S +K+ + KL EL+DYA + ++ Sbjct: 185 STYKTRLLQKLDCTQNSELVDYALRHNIL 213 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 277 bits (709), Expect = 2e-73, Method: Composition-based stats. Identities = 57/209 (27%), Positives = 108/209 (51%), Gaps = 2/209 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V++ D H I+R + +++ + +++++++ + + ID D+ ++DI +PG D Sbjct: 2 IRVLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHCPDVAVVDISMPGID 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + R+ + +L L+ E Y RAI+AGA G+++K + + A++ + SG Sbjct: 62 GLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKLHSG 121 Query: 124 YTFFPSETLNYIKSNKCS--TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 F E + S + LS RE+ +LR+L SG +N+EIAD +S KTV Sbjct: 122 SRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISVKTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +++ + KL L + ++ +A LI Sbjct: 182 DTYRARLLKKLNLRNNADISRFAIQNNLI 210 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 277 bits (709), Expect = 2e-73, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 4/212 (1%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P +++ D H ++R I LL+K + IV + D R T+ + T D+ IMDI +PG Sbjct: 4 PLKIVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRETVTLVHTFAPDIAIMDITMPGL 63 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +GF RI + KVL LS + Y +A++AGA G++ K ++ A+ + Sbjct: 64 NGFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNAVRK 123 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTV----LSNREVTILRYLVSGLSNKEIADKLLLSN 178 G T+ + + L+ R I++ + G S KEIA L LS Sbjct: 124 GETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLNLSV 183 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 KT+ H+ ++ +LGLH + ++ YA LI Sbjct: 184 KTIETHRMHLMARLGLHDVAGVVRYALRTGLI 215 >UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1 Tax=Bacillus subtilis RepID=YXJL_BACSU Length = 218 Score = 277 bits (709), Expect = 2e-73, Method: Composition-based stats. Identities = 46/213 (21%), Positives = 89/213 (41%), Gaps = 5/213 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 V + D P++R ++ +++ + + D I + D+I+MD+ +P Sbjct: 5 KIRVALADDQPLVREGFRYVINAQTDMTVSGEAGDGHDIIALAKQTKPDVILMDVQMPRC 64 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G K I K++ L++ Y I+AGA G++ K ++ A++ Sbjct: 65 SGIEAAKDIMSALPNTKIVILTTFDTEEYVFEGIRAGAVGYLLKDTLPEELIDAIRAAAR 124 Query: 123 GYTFFPSETLNYIKSN-----KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 G F + T I S + + + RE+ +L+ + GL N++IA+KL +S Sbjct: 125 GEAIFRTVTAAKIISETFRAKQQTHAEELAEPFTKRELEVLQQMAYGLRNEDIAEKLFVS 184 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H I K + + +A ++ Sbjct: 185 ESTVKTHVHRILQKCNAQDRTQAVVFAIRNGIV 217 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 277 bits (709), Expect = 3e-73, Method: Composition-based stats. Identities = 60/220 (27%), Positives = 110/220 (50%), Gaps = 10/220 (4%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MK +++++D H I+R I+ L+ IV + + I+ ++ D++IMDI +P Sbjct: 1 MKKINILLVDDHTIVRDGIKATLKDQKNFHIVGEAANGLDGIEAVKQLKPDVVIMDITMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G I + KVL LS Y ++++AGA G++ K D+++ A+ + Sbjct: 61 EMSGIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITAV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVT----------VLSNREVTILRYLVSGLSNKEI 170 +G +F + + + S S T + L+ RE IL+ + G +N+EI Sbjct: 121 YNGDKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNREI 180 Query: 171 ADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 AD L +S +T+ H++NI KL + + VEL+ A +++ Sbjct: 181 ADGLGISIRTIETHRANIMKKLKVKNAVELVRIAIDEKIV 220 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 276 bits (708), Expect = 3e-73, Method: Composition-based stats. Identities = 49/210 (23%), Positives = 98/210 (46%), Gaps = 2/210 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M V+++D H ++R+ ++ L ++++V + D + D+++MD+ +P Sbjct: 1 MNTIRVMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALEVKPDVVVMDLVMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G + + +++ L+S + ++AGA G++ K + ++I A++ + Sbjct: 61 KMTGVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAIRKV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 G +E ++ +K L+ RE IL L G N+ IAD+ +S KT Sbjct: 121 ALGEYAIETEVEKKVEHHKRHP--DLHDDLTAREREILTLLAKGYDNQRIADESFISLKT 178 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V H SNI KL + + + YA + L+ Sbjct: 179 VKTHVSNILSKLAVSDRTQAVVYAFQHGLV 208 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 276 bits (708), Expect = 3e-73, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 99/209 (47%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 KP V++ D H ++R I L K E+++V + + R + D+++MD+ +P Sbjct: 3 KPIRVLLADDHALVRDGIRARLNKVPEIEVVGEATNGREAVKLAHELRPDVLLMDVSMPV 62 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G +++ + VL LS Y +QAGA G++ K ++ A+ + Sbjct: 63 MNGLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAISSVA 122 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 SG +F S + S L++RE +L + GL NKE+A L +S +TV Sbjct: 123 SGGYYFSSAVGPTLVGTATSAPIEDPYGLTDRERQVLTAIAKGLPNKEVAKSLGISVRTV 182 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +H+ N+ K+G + +L A+ L+ Sbjct: 183 ESHRLNLREKVGNKNAAQLYKVAQDLGLL 211 >UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=C4L5Q6_EXISA Length = 230 Score = 276 bits (707), Expect = 4e-73, Method: Composition-based stats. Identities = 53/226 (23%), Positives = 100/226 (44%), Gaps = 16/226 (7%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M T + I+D H + R ++ + E +V + R I + +++IMDI++P Sbjct: 3 MTQTRIAIVDDHELFREGLKRIFDLEDEFTVVAEGRTGREAIRIAGEQKPEILIMDINMP 62 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 +G K++ + +VL LS + Y A++AGA+GF+ K ++ AV+ + Sbjct: 63 DMNGIEATKQLSLLSPETRVLILSIHDDESYITHALEAGASGFLLKEVASTELISAVRAV 122 Query: 121 LSGYTFFPSETLNYIKSN----------------KCSTNSSTVTVLSNREVTILRYLVSG 164 + + + + T+ +LS REV +L L G Sbjct: 123 AKDGAYLHPKVTTNVLKEYRRLLQFKGEQAGRGVESRTDDPVYQLLSRREVEVLHLLADG 182 Query: 165 LSNKEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 SN++I+D L +S KTV H S++ K+ ++ + + A + Sbjct: 183 RSNRDISDMLFISEKTVKNHVSSVLRKMDVNDRTQAVVDAIRRGWV 228 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 276 bits (707), Expect = 4e-73, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 99/212 (46%), Gaps = 5/212 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 S+++ D H I+R ++ LL+ ++ ++V + D ++ + + +++ D+ + G Sbjct: 2 ISIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEAVNLVESLQPGVLVTDLMMGGMS 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++ + V+ LS Y A++AGA +V K + ++ +V+ + G Sbjct: 62 GIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREAVQG 121 Query: 124 YTFFPSETLNYIKSNKCSTNS-----STVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 + + S ++ L+ RE +L + G + EIA++L +S Sbjct: 122 HRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLFISP 181 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +TV H++N+ KL L + +L+ YA +I Sbjct: 182 RTVEVHRANMMRKLDLRNQTQLLRYALQRGII 213 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 276 bits (707), Expect = 4e-73, Method: Composition-based stats. Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 5/211 (2%) Query: 1 MK-PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDL 59 M P V+I+D HP++ I+ +L+ ++++V R I D+I+MD+++ Sbjct: 20 MNGPIRVLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVPDVILMDLNM 79 Query: 60 PGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 P G + + I++ ++VL LS Y A+ GA G+V K +I A+ Sbjct: 80 PDVGGLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDA 139 Query: 120 ILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 ++ G + + + + ++ L+ RE TIL L G SNKE+A L +S + Sbjct: 140 VMRGEQYLCTGAAGSL----SPQSQTSREALTGREQTILLELAQGKSNKEVAQALDISVR 195 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H+ NI KLG+ S L YA + ++ Sbjct: 196 TVETHRKNIKRKLGISSTAGLTRYALEHGVL 226 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 276 bits (707), Expect = 4e-73, Method: Composition-based stats. Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 4/211 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D H I+R I +LL++ +L +V + D+ R + +++MD+ +PG + Sbjct: 2 IKVMVVDDHSIVREGIRILLERFPDLSVVAEADNGRKASELAADLAPHVVLMDMTMPGLN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +R+ V+VL LS + + +A +AGA G++ K ++ AV+ + G Sbjct: 62 GIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQVACG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSS----TVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 + + + + + L+ RE +L+ + G + K A +L ++ K Sbjct: 122 EMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNINVK 181 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H+ I KL + S+ EL YA LI Sbjct: 182 TVDTHRQQIMKKLKMRSVAELTKYAIREGLI 212 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 276 bits (707), Expect = 4e-73, Method: Composition-based stats. Identities = 53/211 (25%), Positives = 108/211 (51%), Gaps = 3/211 (1%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P V+I D H ++R + +L + +++V + + R +D D++++DI +P Sbjct: 10 PIRVLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVPDVVVLDITMPEE 69 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G R+++ +VL LS + Y ++ G +G++ K + ++ A++ + + Sbjct: 70 SGLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIRAVHA 129 Query: 123 GYTFFPSETLNYIKSNKCSTNSST---VTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 G TFF + + S + + + + +L+ RE +L + GL+NK IA +L +S + Sbjct: 130 GGTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELGISRR 189 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV AH+ ++ KL +HS+ L +A +I Sbjct: 190 TVEAHRESLMRKLQIHSVAGLTRFALETGII 220 >UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1H354_METFK Length = 213 Score = 275 bits (706), Expect = 5e-73, Method: Composition-based stats. Identities = 54/207 (26%), Positives = 103/207 (49%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++++D H ++R + LL++N ++++ + D + D+I+MD+ +PG Sbjct: 5 IRIMLVDDHEVVRSGLRRLLEQNDGVEVIAEADSGEQAYQFYGEHMPDVIVMDMSMPGMG 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G L+RI +V+ S +A +A+ AGA +V+K +D+ AV+ + G Sbjct: 65 GLEALRRIIARYPQARVIIFSMHENAAFASQALGAGARAYVAKSGAADDLVQAVREVAQG 124 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + I S + +LS RE + R L +G +EI+ L +S KTV+ Sbjct: 125 KGYLSPGIAQQIALQTLSGSDDPTRLLSAREFEVFRLLAAGKGVEEISTILKISQKTVAN 184 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 +++ + KLG+ S +EL+ A + +I Sbjct: 185 YQTLLKQKLGITSPIELVRLAIKHGVI 211 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 275 bits (706), Expect = 5e-73, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 103/207 (49%), Gaps = 2/207 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 ++++D H ++R + +LL+ ++ +V + +D R I T DLI++D+ L + G Sbjct: 4 ILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQATTLQPDLILLDLSLTNSSGL 63 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 ++ ++ ++L L+ + Y +A+ AGA+G+V K ++ A++ +L G Sbjct: 64 AAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVLRGEL 123 Query: 126 FFPSETLNYIKSN--KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + + + ++ LS RE +L + G + EIA +L LS KTV Sbjct: 124 YIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPKTVET 183 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 +++ KLGL S L+ +A + L+ Sbjct: 184 YRTRGMEKLGLRSRAALVQFALDHNLL 210 >UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN7_9BACT Length = 220 Score = 275 bits (706), Expect = 5e-73, Method: Composition-based stats. Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 9/216 (4%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +++ D + ++ LL + L+IV + + + ++ R +++MD+++P D Sbjct: 5 IQIVLADDQALFLEGLKTLLSLDDSLEIVGECHNGQEALEACRRLRPQIVLMDLNMPVMD 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G K IKQ V VL L++ + A++AG++G++ K + A++ + SG Sbjct: 65 GVAATKAIKQELPEVNVLTLTTFDDDERVFEALKAGSSGYLLKDTPSKQLVEAIRAVSSG 124 Query: 124 YTFFPSETLNYIKSNKCSTNSSTV---------TVLSNREVTILRYLVSGLSNKEIADKL 174 +F + + + + LS RE +L +L G SNKEIA L Sbjct: 125 ESFLQPSIASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNKEIASHL 184 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 L+ TV H SN+ GKLG+ + A+ L+ Sbjct: 185 DLAEGTVKNHVSNVLGKLGVLDRTQAALMARDLGLV 220 >UniRef50_A9AX03 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX03_HERA2 Length = 218 Score = 275 bits (706), Expect = 5e-73, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 5/211 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++I D ++R + ++L +L+++ + R + T DLI+MD+ +P + Sbjct: 2 IKLLICDDQAVVRDGLSIMLNLAPDLEVIAVASNGREAVQLSATWQPDLILMDLKMPIMN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++I Q VK+L L++ + + AI+AGA G++ K +D+ A++ +SG Sbjct: 62 GIEATRQISAAQPLVKILVLTTYDDDEWLFEAIRAGAAGYLLKDMAHSDLVSAIRGTVSG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVT-----VLSNREVTILRYLVSGLSNKEIADKLLLSN 178 + + S ++ + L+ RE+ +L + +G +N IA++L LS Sbjct: 122 KAYVDPNVTARLLSQVATSRNQPPASQLTGRLTERELAVLNLIATGHTNASIAEQLRLSE 181 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 TV H S I KL + + A + L Sbjct: 182 GTVRNHVSTILSKLDVADRTQAALLAVEHGL 212 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 275 bits (705), Expect = 8e-73, Method: Composition-based stats. Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 3/210 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 P V+++D I+R ++ + Q E++IV + + I +T D+I+MDI++P Sbjct: 6 NPIRVLLVDDEDIVRYGLKAIAQGTPEIEIVGEAGSGKAAIAQAKTLQPDVILMDINMPQ 65 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG T + I +IQ KVL L++ E Y A+Q GA G++ K D ++Q Sbjct: 66 MDGVTATQEISRIQPHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDFIQSIQQAH 125 Query: 122 SGYTFFPSETLNY---IKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 GY + ++ RE +L+ + +G SN+EI++ L ++ Sbjct: 126 KGYLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISETLHITE 185 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYE 208 KTV H S+I ++G+ S +L +A Sbjct: 186 KTVKNHVSSILSRVGVQSRTQLAIWANSAG 215 >UniRef50_A7NP18 Two component transcriptional regulator, LuxR family n=12 Tax=Bacteria RepID=A7NP18_ROSCS Length = 222 Score = 275 bits (704), Expect = 9e-73, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 1/209 (0%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P +++ D H + R + LL++ IV + R + D++++DI +P Sbjct: 5 PIRILLADDHRMFRQGLRELLERKGGFIIVGEASTGREVLAQAAALRPDIVLLDIQMPEI 64 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG +++ Q VKV+ L+ + + AI+AGA ++ K D +++ ++ + Sbjct: 65 DGVAVARQLAQTHPDVKVIMLTMYRQDQHLFEAIKAGARAYLLKDADADELIDVIERVHR 124 Query: 123 GYTFFPSETLNYIKSNKCS-TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 G + + L+ RE IL L G N+ IA +L LS KTV Sbjct: 125 GEAALDPTVTLRVFDEFRRLSIDQDAEQLTERERDILTLLAEGHDNRTIAQRLFLSEKTV 184 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S I+ KLG+ + + A LI Sbjct: 185 GNRLSEIFQKLGVSNRTQAALVAVQRGLI 213 >UniRef50_C6XAP6 Two component transcriptional regulator, LuxR family n=3 Tax=cellular organisms RepID=C6XAP6_METSD Length = 214 Score = 274 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 105/207 (50%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D H ++R + LL+++S +++V + + D+ +MD+ +PG Sbjct: 6 IRVLLVDDHTVVRSGLCRLLEQHSGIKVVAEAESGEQAYQVFGEYLPDVTVMDLSMPGMG 65 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++RI T +VL S +A + +++GA G+V+K +++ AV + G Sbjct: 66 GLEAMRRILARYRTARVLIFSMHENAAFAMQTLKSGARGYVAKTGSFDELVKAVVEVARG 125 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 ++ + I + ++ LS RE + R G + +EIA+ L +S KTV+ Sbjct: 126 KSYISTSIAQKIALQTVIGDGDLISQLSPREFEVFRLFAEGKNAEEIAEVLKISQKTVAN 185 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 + + + KLGL + VE++ +A + LI Sbjct: 186 YHTLVKQKLGLSNPVEMVRFAIKHGLI 212 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 274 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 6/214 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M P ++I D H I+R + VLL++ L++ ++ R + D++IMDI +P Sbjct: 1 MPP-RILIADDHAIVREGLRVLLER-KGLEVPWMAENGRQAVCLAVKFKPDIVIMDITMP 58 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 +G ++I Q +V+ LS ++ Y R AGA +V K + ++F A+Q + Sbjct: 59 NMNGSIATEKIMQALPRTRVIALSMHADRRYIDRMFNAGAIAYVLKDSAFAELFDAIQAV 118 Query: 121 LSGYTFFPSETLNYIKS----NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 G + + + +S RE +L+ + G+ ++IA++L + Sbjct: 119 GRGKYYISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAERLFV 178 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S KTV AH+ NI KL + S+ L +A L+ Sbjct: 179 SIKTVEAHRRNIMNKLMISSVAGLTRFAIQEGLV 212 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 274 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 49/209 (23%), Positives = 96/209 (45%), Gaps = 3/209 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 S++I++ ++R + +L +++V + D + D+I+MD+ +P + Sbjct: 6 ISILIVEDQTLMRQGLRTILDLEESIRVVGEARDGAEGVREALRLRPDIILMDVQMPVMN 65 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++ I S +++ L++ Y ++++AGA G++ K + ++ + +G Sbjct: 66 GVEAIRAIIAAWSQARIIVLTTFDRDDYVFQSVRAGAMGYLLKDAPAEALLQTIRRVHAG 125 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVT---VLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 F E + + T LS RE +L L GLSN+EIA +L ++ T Sbjct: 126 EVFIQPEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSNREIAGRLSITEGT 185 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 V H SNI KL + + + A+ L Sbjct: 186 VKNHVSNILAKLQAENRTQAANIARREGL 214 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 2/207 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D HP++R + +L + + V D + ++ + + D++++D+ LP Sbjct: 2 IRVLVVDDHPVVRHGLMAMLGWEQDFEPVGDAADGQQAVNLIEQQQPDVVLLDLRLPQLS 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++ + + L L++ Y G A+ AGA G++ K ++F A++ I G Sbjct: 62 GIEVMRHTRASAPNTRFLVLTTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAIRSIYEG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 S + + + LS RE+ +L+ LV G SNK IA L +S T+ + Sbjct: 122 GAALQSGIAARVLKRLATEPAE--DELSQRELDVLQLLVRGESNKAIALSLNISENTIKS 179 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H S+I+ KL + S E + A L+ Sbjct: 180 HVSHIFSKLDVRSRAEAVAVALQRGLV 206 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 5/212 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 S+II + H ++R ++ LLQ L + + D ++ +D +L++MDI +P D Sbjct: 5 YSLIIAEDHTLLREGLKSLLQSVPHLIVTGEASDGQMAVDLCDRNQPELVLMDISMPRMD 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + IK+ V+VL L+ Y A+ AGA+G+V K ++ AV+ +L G Sbjct: 65 GVQATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVLGG 124 Query: 124 YTFFPSETLNYIK-----SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 + + + + + SS+ L+ RE I + + G N+EIA+ L++S Sbjct: 125 KIYLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVVSV 184 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 KTV H+SN+ KLG+HS EL A +I Sbjct: 185 KTVEKHRSNLMQKLGVHSAAELRALALERGII 216 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 6/214 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 V++ D HPI+R+ + LL+ ++ +V + ++ RT D+ ++DI +PG Sbjct: 4 NKIRVLLADDHPIVRVGLRALLEAEPDIAVVGEAGTADEAVELARTLQPDVAVLDISMPG 63 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G L+RI + + L L+ +E Y +QAG +G+V K + D+ A++++ Sbjct: 64 -NGLEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGGSGYVRKSSLHTDLVEAIRLVA 122 Query: 122 SGYTFFPSETLNYIKS-----NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 G F + + +LS RE +LR +G + +EIAD+L L Sbjct: 123 RGEVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQLFL 182 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S KTV ++ + KLG EL+ +A L+ Sbjct: 183 SPKTVETYRHRVMQKLGFSRRSELVRFALRIGLL 216 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 5/213 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P +I++D H +IR ++L++ + ++V + R I+ R D+++MD+ +PG Sbjct: 10 PVRLIVVDDHDLIRAGFRLVLEQEPDFEVVGEASSGREAIELCRRLRPDVVVMDLAMPGV 69 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG +RIK+ V VL +++ + Y A++AGA G+V K + + A++ +LS Sbjct: 70 DGLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPRVISALRRLLS 129 Query: 123 GYTFFPSETLNYIKSNKCST-----NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 G + E + + N L+ RE +L + G +N EIA +L++S Sbjct: 130 GESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIARELVIS 189 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 T +H NI KLG+ + + A LI Sbjct: 190 RGTAKSHVQNIIRKLGVSDRTQAVARAFELGLI 222 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 100/207 (48%), Gaps = 6/207 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +++ D HPI+ ++ + LQ S++ ++ D R ++ D+ +MD+ +P + Sbjct: 9 IRILLADDHPILGQALTMFLQCESDMTVIGHAGDGREALELFHQHQPDVALMDLRMPKME 68 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + I +++ L++ R ++AGA G++ K + N++ A++ + G Sbjct: 69 GADAIAAICAKFKHARIVVLTTFDGDEDIYRGLRAGAKGYLLKGAEPNELLDAIRTVHKG 128 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + P + S LS+RE+ +LR + G +N++I++ L ++ TV Sbjct: 129 QKYIPPTIAAKLAERMSS------EELSDRELEVLRLIAKGKNNQQISNVLNIAESTVRF 182 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H +NI+GKL + + + A ++ Sbjct: 183 HTNNIFGKLNVSDRTQALVTALNRGIV 209 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 273 bits (699), Expect = 3e-72, Method: Composition-based stats. Identities = 56/211 (26%), Positives = 110/211 (52%), Gaps = 4/211 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 T V+I+D H + R + +L +++V + D+ +D++ PVDL++MD+ +P D Sbjct: 14 TRVLIVDDHELARAGLAAVLACEPGIEVVGEADNGAAALDFVARHPVDLVMMDLQMPVID 73 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +RIK + + ++ ++ +++ A++AG G++ K + +I AV+ +L G Sbjct: 74 GIEATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVRQVLRG 133 Query: 124 YTFFPSET----LNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 F + L + + +++ + L+ RE +LR L+ G +N+EIA +L++S Sbjct: 134 EAFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIARELIISPG 193 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H +I KLG+ + A L+ Sbjct: 194 TVKVHVEHIIAKLGVSDRTQAAVRALELGLV 224 >UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID=C0WKL5_9CORY Length = 253 Score = 273 bits (699), Expect = 3e-72, Method: Composition-based stats. Identities = 51/234 (21%), Positives = 100/234 (42%), Gaps = 25/234 (10%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +P + ++D P++R +L+ ++ +V + D +D R PVD+I+MD+ + Sbjct: 9 EPIRIALVDDQPLLRAGFAMLIGSQEDMSVVWQASDGDEVLDLARQEPVDIILMDVQMAR 68 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G + + KV+ L++ + + AI AGA+GF+ K + ++ A++ + Sbjct: 69 VNGIAATEEVLPEFPDTKVIMLTTFDDHNFVHGAISAGASGFLLKDVEPEELLSAIRTVH 128 Query: 122 SGYTFFPSETLNYIKSNKCSTN-------------------------SSTVTVLSNREVT 156 SG + S + L+ RE+ Sbjct: 129 SGEAVLSPRITAQVLQQVRSEEGGDSRKAHSASHTAAAAQPGATTATAPPSAELTPREMD 188 Query: 157 ILRYLVSGLSNKEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 ILR + G SN EI+++ +S TV H ++ K G V+ + YA + ++ Sbjct: 189 ILRLMALGYSNTEISEEEFVSMATVKTHVRHVLTKTGSRDRVQAVLYAYTHGVV 242 >UniRef50_A3Y699 Putative two component system response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y699_9GAMM Length = 226 Score = 273 bits (699), Expect = 4e-72, Method: Composition-based stats. Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 8/217 (3%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M ++I+D ++R + ++L S++++V + + I+ + DLI+MDI +P Sbjct: 1 MS-IRIVIVDDQALVRSGLSMILDHQSDIEVVAECANGLEAIEAAKKYIPDLILMDIRMP 59 Query: 61 GTDGFTFLKRIK-QIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 DG + I + +++ LS+ Y RA++ GA+GF+ K +++ AV + Sbjct: 60 EMDGLSATSAILGDLNIQTRIVILSTFDLDEYIYRALREGASGFILKDTPPDELVAAVHV 119 Query: 120 ILSGYTFFPSETLNYIKSNKCSTNSS------TVTVLSNREVTILRYLVSGLSNKEIADK 173 + G + S + L+ RE IL+ L G +N EIA + Sbjct: 120 VAQGGALLTPSITKKLIGAFAELKPSHTNVTGHIDRLTTREKEILKNLALGFNNSEIASR 179 Query: 174 LLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 L + TV H S++ KL L + + +A +I Sbjct: 180 LFIGESTVKTHVSSLLSKLELRDRAQAVIFAYENGVI 216 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 272 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 13/221 (5%) Query: 1 MKPT--SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDID 58 MKPT + ++D H I+R ++++L +I ++ D +D + DL+I DI Sbjct: 1 MKPTNTKIFLVDDHAILREGLKMILSGQ--FEICGESGDAEKALDQIGKLNPDLVITDIS 58 Query: 59 LPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQ 118 +PG G +K +++ ++ + LS Y + ++ G NG+V K + ND+ A++ Sbjct: 59 MPGLSGIDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAIE 118 Query: 119 MILSGYTFFPSETLNYIKSNKCSTNSS---------TVTVLSNREVTILRYLVSGLSNKE 169 + G T+ + S + +VLS+RE IL+ + G SN+ Sbjct: 119 AVHKGETYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNES 178 Query: 170 IADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 I L +S TV H++NI KL LH + +L+ YA LI Sbjct: 179 IGKILGISPATVKVHRANIMKKLNLHKVADLVMYAIRAGLI 219 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 272 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 62/213 (29%), Positives = 111/213 (52%), Gaps = 3/213 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M+ +I++D H + R + LL + +++V + + L D++ MD +P Sbjct: 1 MELCRIILVDDHSLFRSGMRGLLDRYDGIRVVGEASTGEEFLAMLPATEADVVFMDFAMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G +G ++ ++ +KV+ LS + Y R +QAGA GF+ K + +++ A++ + Sbjct: 61 GMNGAETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIETV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTN---SSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 +G T+F E L + S + + LS RE+ IL + GLSN+EIAD+L +S Sbjct: 121 AAGGTYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFIS 180 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +TV H++NI K G + L+ YA + L+ Sbjct: 181 KRTVDKHRANILEKTGCKNTASLVVYAVRHGLV 213 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 271 bits (696), Expect = 7e-72, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 11/213 (5%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 +++ D H I+ I L + ++V + + + ++ D+++MD+++P Sbjct: 2 KIKILLADDHQIVLKGISFFLAMQPDFELVGEAHNGKEAVEKAGELQPDIVLMDLNMPIM 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG IK+ +KVL L+S ++ + A+Q GA G++ K + + + A++ Sbjct: 62 DGIEASALIKEQHPHIKVLVLTSFADQSHIVPALQTGAIGYMLKDVEPDQLAEAIRSAYK 121 Query: 123 GYTFFPSETLNYIKSNKC-----------STNSSTVTVLSNREVTILRYLVSGLSNKEIA 171 G + + S S ++ L+ RE+ +L L GLSNK+IA Sbjct: 122 GNIQLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLSNKDIA 181 Query: 172 DKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYA 204 L+++ KTV H S+I KL L + +A Sbjct: 182 QTLIVAEKTVKTHVSSILSKLDLSDRTQAALFA 214 >UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10 Tax=Bacteria RepID=Q1IXN1_DEIGD Length = 221 Score = 271 bits (696), Expect = 8e-72, Method: Composition-based stats. Identities = 51/208 (24%), Positives = 98/208 (47%), Gaps = 2/208 (0%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +P V+++D H ++R + + L +S++++V + + + D++IMD+ +P Sbjct: 8 RPVRVLLVDDHAVVRQGLRLFLSLDSQIEVVGEAANGEEALAAAERLHPDVVIMDLMMPV 67 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG + +++ +V+ L+S E AI AGA G++ K + + A+ Sbjct: 68 MDGIQATRLLRRQHPDTEVIALTSTLEEHKVNGAIDAGAMGYMLKDASSDTLADAIHAAA 127 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 G E + + + L+ +EV +L+ + G SN++IA ++ TV Sbjct: 128 RGEVRLHPEAARRLVRDFRTPEMR--ETLTPKEVIVLQLIARGYSNRDIARDQGVTEATV 185 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYEL 209 H S + GKLGL S + YA + L Sbjct: 186 KTHVSRLLGKLGLESRTQAALYALRHGL 213 >UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10 Tax=Proteobacteria RepID=Q1GZT3_METFK Length = 215 Score = 271 bits (696), Expect = 8e-72, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 103/210 (49%), Gaps = 1/210 (0%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 V+I D H I+R ++ +L + ++++V + I T+ +D++++DI LP Sbjct: 5 STIKVVIADDHAILREGLKQILAETEDIEVVADAKNAAEAIKLAGTKGLDVVVLDISLPD 64 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G IK+ V VL LS E YA RA++AGA G++SK + + + A++ + Sbjct: 65 RSGIEACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAVGYLSKQSASDQLVTAIRTVA 124 Query: 122 SGYTFFPSETLNYIKSNKCST-NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 G + +E + LSNRE L + SGLS EIA+ L LS KT Sbjct: 125 KGKKYISAEVALALADQVSGGLEKPIHDTLSNREFQTLTMIASGLSVSEIAENLSLSVKT 184 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 VS +++ + KL L EL YA LI Sbjct: 185 VSMYRARLLEKLNLRHNAELTHYAIKNNLI 214 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 271 bits (696), Expect = 8e-72, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 114/208 (54%), Gaps = 2/208 (0%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P SV I+D HP+++ ++ L ++ IV TDD ++ D+I+MDI +P Sbjct: 8 PVSVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKAIELKPDVILMDISMPTM 67 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +G + I + KVL LS S + AIQAGA G++ K +I++A++ + + Sbjct: 68 NGIDATEIITEQLPETKVLILSMHSNPEFVKSAIQAGAVGYLLKDTTSEEIYYAIKAVAN 127 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G T F S + N +TN S L+ RE +L YL G ++KEIA L +S +TV Sbjct: 128 GKTHFSSSIAKLLIDNPVNTNES--EKLTTREQVVLSYLAKGKTSKEIAKILNISFRTVE 185 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 AH+ N+ KLG+HS+ +LI YA + +I Sbjct: 186 AHRRNMKTKLGIHSLAKLISYAVKHGII 213 >UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR family n=30 Tax=root RepID=A1WBJ7_ACISJ Length = 239 Score = 271 bits (695), Expect = 9e-72, Method: Composition-based stats. Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 1/210 (0%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 + I+D H I+R + L ++ +L++V + + R ID +R +D+++MD+ +PG Sbjct: 29 SMIKIGIVDDHAIVRAGLRQFLSEHVDLRVVGEASNGREAIDLVRVHEIDVLVMDLSMPG 88 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G L ++ + +L LS E YA I+ GA+G+++K + +I A++ I Sbjct: 89 QSGLDALAMLRAKAPDMGILILSGYPEEHYAINLIRQGASGYLNKECEPKEIVEAIRTIA 148 Query: 122 SGYTFFPSETLNYIKSNKCSTNS-STVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 G + + + + LS RE + L G + +IA L LS KT Sbjct: 149 LGRRYLTPSVADLLAQQLNRKDDAPPHEQLSEREFQVFLKLAKGETAGDIAKSLSLSVKT 208 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 VS +++ + K+GL S +L YA +LI Sbjct: 209 VSTYRTRLMEKMGLSSNSDLTYYALKNKLI 238 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 5/212 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V + D HPI+ I LL + E+++V + + + D+ ++D+ +PG + Sbjct: 5 IRVALADDHPIVLAGIRTLLNADPEIELVGEATSGSEALPMIHAADPDVAVVDVSMPGLN 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +R+ +VL L+ + Y ++AGA G++ K + D+ AV+ + +G Sbjct: 65 GLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAVRAVAAG 124 Query: 124 YTFFPSETLNYIKSNKCST-----NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 + ++ ++ + + LS RE +LR + G SNKEIA + LS Sbjct: 125 GIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARRFDLSV 184 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 K++ +K+ KLGL + E+I YA + + Sbjct: 185 KSIETYKARAAEKLGLRTRAEIIRYAAAHGWL 216 >UniRef50_C0N6H7 Response regulator receiver domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H7_9GAMM Length = 214 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 110/207 (53%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D H ++R + LL++N+++ +V + + D+++MD+ +PG Sbjct: 5 IRVMLVDDHAVVRSGLCRLLEQNTDISVVGEAESGEQAYQTYPEISPDVLVMDMSMPGMG 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++RI S KV+ S YA +++ AGA G+V+K D+ AV+ + SG Sbjct: 65 GLEAVRRILNRWSGAKVIMFSMHENATYAIQSLTAGAMGYVAKSGHAEDLVKAVREVKSG 124 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 +F S+ + + + + + L++RE + R L G +IA +L + KTV+ Sbjct: 125 KSFLSSDMAHKVALQSLAGDDNPTQRLTSREFEVFRLLAEGKLVDDIASRLNIGQKTVAN 184 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 +++++ KLG+HS V+L+ A Y +I Sbjct: 185 YQTSLKQKLGIHSPVDLVRLAMKYGVI 211 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 7/206 (3%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MK V+I D HP+ R + +L + +++ + + DL++MDI +P Sbjct: 1 MKSIRVLIADDHPLFRQGVSSVLANTPDNEVIAEAGSGEEAVQMACNLLPDLVLMDIQMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 +G ++I + ++ ++ + A+QAGA G+V K ++ DI AV+ I Sbjct: 61 DLNGIEATRKILSKCRDIYIIIITMFEDDTSVFSAMQAGARGYVLKDAEKEDILRAVRAI 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTN-------SSTVTVLSNREVTILRYLVSGLSNKEIADK 173 G F S + + S+ L++RE +L L G SN E+A+ Sbjct: 121 AKGEVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEVAET 180 Query: 174 LLLSNKTVSAHKSNIYGKLGLHSIVE 199 L LSNKTV + +NI KL + E Sbjct: 181 LGLSNKTVYNYVANILNKLQVSDRQE 206 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 51/215 (23%), Positives = 103/215 (47%), Gaps = 10/215 (4%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 V+I+D +IR I LL + +++++V + + R ++ + + D+++MD+ +P Sbjct: 2 TIRVLIVDDQALIRTGIATLLSRKADIEVVGQAGNGREALELVASLDPDVVLMDVMMPVM 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG +++ + V+ L++ + ++I AGA G++ K D + +++ + Sbjct: 62 DGVEATRKLAERGPRPAVIMLTTFHDDERVLQSIAAGARGYLLKDVDHRVLADSIRTVAG 121 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTV----------LSNREVTILRYLVSGLSNKEIAD 172 G + + + S + VT L+ RE ILR L G +N+EI + Sbjct: 122 GGALIHPQIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLLAQGYTNQEIGE 181 Query: 173 KLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLY 207 +L LS TV H S I+ KL + + +A+ + Sbjct: 182 QLALSVGTVKNHLSVIFAKLAVRDRTQAALWAREH 216 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 50/213 (23%), Positives = 99/213 (46%), Gaps = 5/213 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M V+++D H I+R ++ +L +++V + + R I D+++MD+ +P Sbjct: 11 MN-IRVLLVDDHKIMRKGLKAILALEHTIEVVAEAANGREAIRKADELLPDVVVMDLTMP 69 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 +G +++I V+ L LS + +AGA G++ K ++ A+ + Sbjct: 70 EMNGIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGATGYLLKDCAVEELVGAIHTV 129 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVT----VLSNREVTILRYLVSGLSNKEIADKLLL 176 SG + + + + + + + LS RE +L+ + +G S KEIA + Sbjct: 130 ASGEPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFGV 189 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 S KTV+ + ++ KL L ++ +L YA L Sbjct: 190 SIKTVAVQRMSVMKKLNLFNVADLTKYAVREGL 222 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 5/210 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +++++D H +IR I LL+ +L +V + D + +R D+++MD+ +P Sbjct: 2 INIVLVDDHALIREGIRSLLEFTPDLHVVGEASDGEEAVKRVRELSPDVVLMDVRMPRMT 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G L+ +++ +V+ L++ E A++AG GF+ K ++ + A++ + +G Sbjct: 62 GLEALRAMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRVANG 121 Query: 124 YTFFPSETLNYIKSNKCS-----TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 T P ++ ++ L+ RE+ ++R + GLSN+EIA L + Sbjct: 122 ETLLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATVLGTAE 181 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYE 208 TV SNI KLG+ + A Sbjct: 182 GTVKNQTSNILAKLGVRDRTRAVLRAMELG 211 >UniRef50_C7RMN3 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMN3_9PROT Length = 213 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 65/209 (31%), Positives = 113/209 (54%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 + ++++D H ++R + +LL + ++++V + ++ I +R D+ ++DI LPG Sbjct: 4 RKLQILLVDDHAVVRGGLRLLLAQTDDMEVVSEAENAEQAISMIRQNEFDVALVDIGLPG 63 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G LK+IK + + VL LS +E YA RA++AGA+G+++K + + A++ + Sbjct: 64 KGGLDLLKQIKAERPRIAVLMLSMYAEEVYAVRALKAGASGYLTKNSPPGTLLAAIRKVA 123 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 G L + S LS+RE+ +LR L SG S +IA+ L LS KTV Sbjct: 124 GGGRHVSPALLEQLAVEVGQGRKSASDALSDREIEVLRRLASGESLTQIAEALHLSPKTV 183 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 + +++ I K GLHS EL YA ++ Sbjct: 184 TTYRARIVEKTGLHSNAELTRYALDKGML 212 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 270 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 4/211 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M P V ++D H I+R + L ++ +V + + + T D+I+MD+ +P Sbjct: 1 MSPIRVALVDDHSIVRRGLSAYLAAQPDIVVVGEAANGESALQMASTWQADVIVMDVLMP 60 Query: 61 G-TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 G DG +++K++ ++ LS ++ A++AGA ++ K + + A++ Sbjct: 61 GGIDGIETTRQLKRLIPHTHIIILSGYADDARVIGALRAGAITYIEKESQPEQLLEAIRG 120 Query: 120 ILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 ++G + I + S + L+ RE +L+ + GL+N EIA +L +S + Sbjct: 121 AMAGKAVLAPALMQRILEAQTSKAA---DTLTEREREVLKLVAEGLTNAEIASRLTVSEE 177 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H ++I KLGL + YA + L+ Sbjct: 178 TVKTHVASILRKLGLAHRTQAAIYALRHGLV 208 >UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacillus RepID=C3BET8_9BACI Length = 216 Score = 270 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 9/212 (4%) Query: 7 IIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFT 66 +I+D +IR + +LL SEL++V +D + ++I+MDI +P +G Sbjct: 1 MIVDDQSLIRDGLAMLLNLRSELEVVGTANDGDEVVRIAEQLQPEIILMDIRMPRINGVE 60 Query: 67 FLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTF 126 + I++ +KVL L++ ++ A++ GA+G++ K + + I A+ + +G Sbjct: 61 GTRLIRERFPDMKVLMLTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHAGGAV 120 Query: 127 FPSETLNYIKSNKCST---------NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 P + I T V L+ RE+ +LR + GL+NKEIA+KL ++ Sbjct: 121 LPQDITAQIVKELKRTKVVEISGQNQPKQVEQLTEREIDVLREIGLGLNNKEIAEKLFIT 180 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 TV H SN+ KL L + YA Y + Sbjct: 181 EGTVKNHVSNLISKLELRDRTQAAIYAVRYGI 212 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 6/208 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 V+++D HP +R+ + L++ + +V + D I+ D+++MD+ +PG Sbjct: 19 TIRVLVVDDHPPMRVGLVALIRSQPGMDVVAEASDGEEAIEIYDDLQPDVVLMDLRMPGM 78 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G + I++ +V+ LS+ RA+Q+GA ++ K +I V+ + + Sbjct: 79 GGVEAILAIRKKAPEARVIVLSTYDWDEDIHRALQSGAKSYLLKDMPIEEIASTVRAVYA 138 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G T P + L+ RE +L L+ G SNKEIA L +S TV Sbjct: 139 GDTSLPRSVAERLTERAQR------EQLTERERDVLESLIKGRSNKEIASSLCISEDTVK 192 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 +H ++ KL + A + ++ Sbjct: 193 SHLKTLFAKLRVRDRTGAAIEAIRHGIV 220 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 58/206 (28%), Positives = 106/206 (51%), Gaps = 2/206 (0%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 V+I D H ++R + ++L ++E+++V +T + R + R D+++MD+ +P DG Sbjct: 4 RVLIADDHAVVRQGLRMILGLDNEIKVVGETTNGREAVRLARELCPDVVLMDLLMPVMDG 63 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 + I+Q V+V+ L+S + A++AGA GF+ K + +D+ +AV+ +G Sbjct: 64 VSATAEIRQDIPEVEVVALTSSLDDAMVMGAVRAGAIGFLLKNAEADDLRNAVKAAAAGQ 123 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 ++ + + L+ RE +L L G +NKEIA L + +TV + Sbjct: 124 IHVSPAAISRLMGQVREPSGP--EQLTERETEVLTMLARGKANKEIARDLRIGQQTVKTY 181 Query: 185 KSNIYGKLGLHSIVELIDYAKLYELI 210 S+I KLG+HS + YA L+ Sbjct: 182 VSHILTKLGVHSRTQAAVYAVQSGLV 207 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 51/209 (24%), Positives = 101/209 (48%), Gaps = 5/209 (2%) Query: 7 IIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFT 66 +++D + R + +LL + +++V + D + T D++++DI +P G Sbjct: 2 LVVDDQELFRRGLTMLLGTEAGIEVVGEAGDGVEGTNLAATAAPDVVLLDIRMPKRSGIE 61 Query: 67 FLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTF 126 IK+ + K++ L+ E A+++GA+G++ K + ++ AV+++ G + Sbjct: 62 ACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVADGQSL 121 Query: 127 FPSETLNYIKSNKCSTNSSTVT-----VLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + + L+ RE+ +LR + G++N+EIA +L +S TV Sbjct: 122 ISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFISENTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 H NI KL LHS +E + YA +L+ Sbjct: 182 KNHVRNILEKLQLHSRMEAVMYAVKEKLL 210 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 5/213 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 + V++ D H I+R L+Q+ S + +V + D ++ D+++MDI +P Sbjct: 5 QMIKVLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSMKVHPDVVVMDIAMPR 64 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G K+IKQ+ T +L L++ Y ++AGA F+ K + A++ + Sbjct: 65 LNGIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAIRAVY 124 Query: 122 SGYTFFPSETLNYIKSNK-----CSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 +G + T + + S V L++RE+ +L+ G+SNK+IAD+L L Sbjct: 125 AGESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIADQLYL 184 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 SN+T+ H SNI+ KL + S E I Y Sbjct: 185 SNRTIQTHLSNIFKKLSVGSRTEAILYGLKRGW 217 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 1/208 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I D HP++R + +L+ +Q+V + D + I+ RT D+++MD+++PG + Sbjct: 2 IRVVIADDHPLLREGLRRILEFEEGIQVVCEVGDGQGAINVSRTLDFDILLMDLNMPGVN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + I++ T+ +L L+ + +Q G G++ K D + +++ + SG Sbjct: 62 GLEACRVIRRENETIGILVLTVDDSDEKVFQVLQLGVAGYLLKDVDPKTLIDSIRKVHSG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVT-VLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + + T LS+RE+ IL Y+V G SN+EI L +S KTV Sbjct: 122 QPILSPAVTGKLLGQLVHPTQNRDTCGLSDRELQILTYVVKGSSNREIGQALFISEKTVK 181 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 H S+I+ KL + + A +L+ Sbjct: 182 NHLSSIFRKLAVEDRTQAALKAVKLKLV 209 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 269 bits (689), Expect = 4e-71, Method: Composition-based stats. Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 1/208 (0%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 V+ +D H ++R+ I L S++++V + + I DLI+MD+ + Sbjct: 2 TIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDM 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG +IK+ +KVL L+S E RA+ AG + ++ K DI AV+ Sbjct: 62 DGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSR 121 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G + F E L +++ +L+ RE+ IL + G SN+EIA ++ KTV Sbjct: 122 GESVFEPEVLVKMRNRMKKRAE-LYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVK 180 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 H SNI KL + + + YA + LI Sbjct: 181 THVSNILSKLEVQDRTQAVIYAFQHNLI 208 >UniRef50_C5C7H0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=9 Tax=Bacteria RepID=C5C7H0_MICLC Length = 230 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 97/221 (43%), Gaps = 13/221 (5%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P V ++D +IR + +L+ +L +V + R + + D+++MD+ +P Sbjct: 8 PVRVALVDDQALIRSGLAMLVDSQPDLTVVAEAGSGREAVASVSVAGADVVLMDVRMPEM 67 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG + + + +V+ L++ YA AI+AGA+GF+ K ++ A++ + Sbjct: 68 DGIEATRALLRRPDAPRVVVLTTFDLDEYAFDAIEAGASGFLLKDAPPEELLAAIRTVHR 127 Query: 123 GYTFFPSETLNYIKSNKC-------------STNSSTVTVLSNREVTILRYLVSGLSNKE 169 G T + ++ + V L+ RE +L + G +N E Sbjct: 128 GDAVIAPSTTRRLLTHMAPRLRSDQVRSAECEEQQAAVASLTPREREVLVLMAQGAANLE 187 Query: 170 IADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 IA +L+LS TV H + KLG V+ + A L+ Sbjct: 188 IAAELVLSEATVKTHVGRVLAKLGARDRVQAVLIAHRAGLV 228 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 5/212 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M V++ D H + + LL K +++ D + D+ +MD+ +P Sbjct: 1 MS-IRVLLADDHEMFLEGLRELLGKADGIELAGLARDGAEAVAAAERLQPDVALMDMTMP 59 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 +G ++I KVL LS + +++AGA G+V K ++ A+Q + Sbjct: 60 RLNGIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGARGYVLKECSSQELCLAIQTV 119 Query: 121 LSGYTFFPSETLNYIKSNKCS----TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 +G + L+ + + + LS RE+ +L+ LV G + K+IA++L + Sbjct: 120 ANGQYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQLSI 179 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYE 208 S TV H+ +I KLG +S+ EL YA Sbjct: 180 SKNTVDTHRRHILDKLGCNSMAELTRYAIREG 211 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 1/207 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V ++D HP + ++ L ++IV + + I + ++ ++D+ LPG + Sbjct: 2 IQVYLVDDHPFVLQGLKAYLNTREGIEIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPGLN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + IK+ +V+ LSS ++ AI AGA +V K + + A++ G Sbjct: 62 GIEVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAARRG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 I T L+ RE +L LV G SN++IA L +S TV Sbjct: 122 EPVLTPGVAKKIMKRAARKGRKT-EPLTPREKEVLACLVRGNSNRDIAKTLCISETTVKT 180 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H SNI KL + + + A L+ Sbjct: 181 HVSNILKKLDVKDRTQAVIKAIENNLV 207 >UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobacteria RepID=GACA_PSEAE Length = 214 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 104/209 (49%), Gaps = 2/209 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D H ++R I +L LQ+V + D + R D+++MD+ +PG Sbjct: 2 IKVLVVDDHDLVRTGITRMLADIEGLQVVGQADCGEDCLKLARELKPDVVLMDVKMPGIG 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +++ + Q +KV+ ++ E + R +QAGA G+++K ++ A++ + +G Sbjct: 62 GLEATRKLLRSQPDIKVVVVTVCEEDPFPTRLMQAGAAGYMTKGAGLEEMVQAIRQVFAG 121 Query: 124 YTFFPSETLNYIKSN--KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + + + + + S LS RE+ I + + + I+DKL LS KTV Sbjct: 122 QRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALMIANCHKVQSISDKLCLSPKTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 + ++ I+ KL + S VEL A + ++ Sbjct: 182 NTYRYRIFEKLSITSDVELALLAVRHGMV 210 >UniRef50_Q15T22 Two component transcriptional regulator, LuxR family n=4 Tax=Alteromonadales RepID=Q15T22_PSEA6 Length = 214 Score = 268 bits (688), Expect = 6e-71, Method: Composition-based stats. Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 1/208 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++++D H ++R I +L+ +V + + + R DL++MD+ +PG Sbjct: 2 IKILLVDDHELVRTGIRRILEDVQGFVVVGEATTGEEAVKFCRKNAPDLVLMDMSMPGIG 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G K+I + +V+ LS E + ++ GA G+++K +D ++ A++ + +G Sbjct: 62 GLEATKQILRFSENTRVIVLSVHKENPIPAKVMRMGAFGYLTKDSDPKEMELAIRKVAAG 121 Query: 124 YTFFPSETLNYIK-SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + + I ++ + LS RE+ I L G +IA L +S KTV+ Sbjct: 122 QKYVSPDIAQQIAIGALDFSDGNPFESLSERELEITLMLTKGSKVPDIAKFLNISAKTVN 181 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 H+ ++ KL + + VEL A ++LI Sbjct: 182 THRYRMFEKLNVSTDVELTHLALRHKLI 209 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 268 bits (688), Expect = 6e-71, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 105/209 (50%), Gaps = 2/209 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 + I D H ++R + +L ++ +++V + + ++ ++ + D++++DI +P D Sbjct: 2 IKIAIADDHALLREGMRRMLSQSELIEVVGEASNGAEAVEVVKEKAPDVLLLDITMPVKD 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G I + K+L LS ++ YA R ++AGANGF+SK ++ A+ + G Sbjct: 62 GIEATADILALNVNTKILILSMHADEQYALRTLRAGANGFISKGARLEELLKAITDVHEG 121 Query: 124 YTFFPSETLNYIKSN--KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + P + + V LS RE ++ +L G++N+EIA L +S KTV Sbjct: 122 QRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQISVKTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 H+S++ KL L + ++ +A + I Sbjct: 182 DTHRSHVLKKLELRNNSDITRFAIQHGYI 210 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 268 bits (688), Expect = 7e-71, Method: Composition-based stats. Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 5/213 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 T +++ D H I+R + LL+ S+ +I + D R + + D++I+D+ +P Sbjct: 6 KTRILLADDHDIVRRGLRTLLELRSDWEICAEASDGRAAVQFAEDLAPDIVILDLSMPEL 65 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +G +RI ++L L+ + A+ AG G++ K + D+ +AV ++ Sbjct: 66 NGLEAARRIAAHCPRSRMLMLTMHETEQFVREALAAGVRGYILKTDAGRDLANAVDALIR 125 Query: 123 GYTFFPSETLNYI-----KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 G TFF S I S + L+ RE IL+ L G N+++ L +S Sbjct: 126 GETFFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGKALNIS 185 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 KT H++ I KLG+ S+ +L+ YA LI Sbjct: 186 VKTAETHRARIMAKLGIDSVADLVRYAIRNGLI 218 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 268 bits (688), Expect = 7e-71, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 106/207 (51%), Gaps = 2/207 (0%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 +++ D H + R ++ LL ++ EL++V + + +PVDL+ MDI +PG DG Sbjct: 4 RILLADDHQMFRHALRALLARDPELEVVAEAASGEEVLAIADAQPVDLVCMDIAMPGMDG 63 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 +R+ ++V+ LS+ ++ + + AGA G+++K +++ A++ + G Sbjct: 64 IEATRRLLARHPALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRTVCEGR 123 Query: 125 TFFPSETLNYIKSNKCSTNS--STVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 ++ E + + + L+ RE +L+ + GL++ +I D+L ++ TV Sbjct: 124 SYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHIAASTVE 183 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYEL 209 H+ N+ KL LH++ EL YA + Sbjct: 184 VHRRNLMRKLDLHNVAELTRYAIHSGI 210 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 268 bits (687), Expect = 7e-71, Method: Composition-based stats. Identities = 64/215 (29%), Positives = 108/215 (50%), Gaps = 5/215 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M T V+I D H ++R + LL + ++++V + D + +D + D+++MDI +P Sbjct: 1 MAKTKVLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEAVDMVAQFKPDVVLMDIVMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G K IK+ + +L L++ S+ Y ++AGA+G++ K ++I A++ I Sbjct: 61 RLTGVEATKLIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAIRAI 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVT-----VLSNREVTILRYLVSGLSNKEIADKLL 175 +G + S + + + + LS REV IL+ GLSN+EIADKL Sbjct: 121 KAGESVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIADKLT 180 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 LS +TV AH SNI+ K+ E I + Sbjct: 181 LSMRTVKAHLSNIFNKMRCSCRTEAIVKGFREGYV 215 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 268 bits (687), Expect = 8e-71, Method: Composition-based stats. Identities = 51/218 (23%), Positives = 106/218 (48%), Gaps = 11/218 (5%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +++ D H ++R I+ +L +L++V + +D + + D++++DI++PG Sbjct: 3 IRILLADDHALLRQGIKRVLNFEDDLEVVGEAEDGQEALARTLMLKPDILLLDINMPGLT 62 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G K++KQ +S VK++ L+ Y ++ GA G++ K + N + A+ M+ G Sbjct: 63 GLDVAKQLKQARSRVKIIALTIHDSDNYVLELLKNGALGYLLKDVEPNVLIKAIHMVNEG 122 Query: 124 YTFFPSETLNYIKSNKCST-----------NSSTVTVLSNREVTILRYLVSGLSNKEIAD 172 F + + + + S L+ RE+ +L + GLSN++I Sbjct: 123 NPFVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSNQDIGK 182 Query: 173 KLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 L LS KTV H ++++ KL ++ + + Y +++ Sbjct: 183 ALGLSEKTVKNHLTSVFHKLKVNDRTQALVYVLKNKIV 220 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 268 bits (687), Expect = 9e-71, Method: Composition-based stats. Identities = 50/210 (23%), Positives = 104/210 (49%), Gaps = 5/210 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M+ +++ D HP++R + +L ++V + D + D++++D+++P Sbjct: 1 MEGIRILVADDHPMLREGLSAVLGTRPGFEVVGEAGDGEEVLRLASGLRPDVVLLDLEMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 GT G L+R++ + KV+ ++ + A++ GA G + K + +IF AV+ + Sbjct: 61 GTGGVEVLRRLRGLDDPPKVVVFTAYDDER-LLEALREGARGCLLKGASRTEIFDAVRTV 119 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 +G + P E + + L+ RE+ +LR + GL+N+E+A L +S +T Sbjct: 120 HAGGSVIPPEITARVLKEMRGESEP----LTPRELEVLRLVARGLTNREVARALFISERT 175 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V H S++ KL + + + A+ L+ Sbjct: 176 VKFHVSSLLAKLRAENRTQAVAIARERGLL 205 >UniRef50_D1BX47 Two component transcriptional regulator, LuxR family n=14 Tax=Actinomycetales RepID=D1BX47_XYLCX Length = 234 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 93/222 (41%), Gaps = 14/222 (6%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTR--PVDLIIMDIDLP 60 P V ++D ++R +++ ++ +V + D + L D+++MD+ +P Sbjct: 9 PIRVALVDDQQMVRAGFRMVIDSQPDMTVVAEAGDGVEALRVLGALPVRADVVLMDVRMP 68 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 DG T + +V+ L++ Y AI++GA+GF+ K ++ A++ + Sbjct: 69 RMDGLTATAALTSGADAPRVVVLTTFDIDEYVLEAIRSGASGFMLKDAPPEEMLGAIRTV 128 Query: 121 LSGYTFFPSETLNYIKSN------------KCSTNSSTVTVLSNREVTILRYLVSGLSNK 168 +G + + + S + + L++RE +L + G SN Sbjct: 129 HAGDAVIAPSSTRRLLEHLVTALPTPAPDTPPSPAHAALATLTDREREVLELMARGRSNT 188 Query: 169 EIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 EIA L ++ TV H I KL V+ + A ++ Sbjct: 189 EIAADLFVAEATVKTHVGRILAKLDARDRVQAVVLAYETGVV 230 >UniRef50_C0GJ72 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ72_9FIRM Length = 212 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 1/208 (0%) Query: 1 MKP-TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDL 59 MK V+++D H ++R + +LL+ + +++ + + + D+I++D L Sbjct: 1 MKKNIKVMLVDDHSVVRQGLRLLLELDDTMEVCGEAETLTGAVAVCAEVAPDVILLDFKL 60 Query: 60 PGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 P DG +K+ VK++ L++ ++ I+AGA+G++ K + ++ + +Q Sbjct: 61 PDGDGIIGCGNLKRQFPQVKIIILTAYADDHLVTETIKAGADGYLLKNVESEELINTIQA 120 Query: 120 ILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 + G + + N S L+ +EV IL + G +NKEIA+ + +S+K Sbjct: 121 VHKGQSVLDPSVTEILFDNIKSQQPKKEHNLTPKEVQILDMISVGKANKEIAEIMKISDK 180 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLY 207 TV + SNI KL + + E Y Sbjct: 181 TVRNYVSNILQKLNVSNRTEAASYWMRN 208 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 52/212 (24%), Positives = 108/212 (50%), Gaps = 5/212 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P ++++D H ++R + ++L++ SE +V + ++ + + D+++MDI LPG Sbjct: 2 PFDIVLVDDHKLVRDGVRMILERGSEFLVVGEAENGADAVQLCKKSSPDIVLMDIGLPGM 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +G + + +VKV+ LS + AI++GA FV K N++ A++ + Sbjct: 62 NGIEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVAR 121 Query: 123 GYTFFPSETLNYIKSNKCST-----NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 G ++ S+ + + + S + LS RE+ +LR + G ++K+IA L L Sbjct: 122 GGSYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLG 181 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 +TV +++ + KLG++++ L A + Sbjct: 182 LQTVRSYRKTMMKKLGVNNVAGLTQLALAAGI 213 >UniRef50_C7MLQ9 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=29 Tax=Actinobacteria (class) RepID=C7MLQ9_CRYCD Length = 261 Score = 267 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 8/217 (3%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 + V+I+D ++R +++L +++V + + + +++MDI +P Sbjct: 41 ETVDVLIVDDQDLVRNGFKLILSSYDHVRVVGEASNGIEAYEQSLALRPQVVLMDIRMPV 100 Query: 62 TDGFTFLKRIK--QIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 DG ++I + +VL L++ Y A+QAGA+GF+ K + +DI AV+ Sbjct: 101 EDGIAATRKIVGDTALAQTRVLVLTTFDIDEYVYDALQAGASGFMLKDAEPDDIVRAVRT 160 Query: 120 ILSGYTFFPSETLNYIKSNKCSTNSSTVTV------LSNREVTILRYLVSGLSNKEIADK 173 + +G + S+ T L++RE ILR++ G+SN+EIAD Sbjct: 161 VAAGDALIQPSITRRLIETFVSSRPRTSAAAGGLVDLTDREREILRFVARGMSNEEIADD 220 Query: 174 LLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 L++S TV H + I GKL H +L+ A L+ Sbjct: 221 LVISPATVKTHLARIMGKLDAHDRAQLVVAAYESGLV 257 >UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR2_THEYD Length = 213 Score = 267 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 1/210 (0%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K V+I+D H + R ++ +L ++ + ID L D++ +DI + Sbjct: 3 KRLKVLIVDDHTLFRKGLKEILLDTPYIKECKEAKSGYEAIDILSKESFDIVFLDIAMSD 62 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G LK+IK + K+L LS E YA R+++ GA+G+++K D ++ AV I+ Sbjct: 63 INGIETLKKIKILYPETKILMLSMYPEEQYAIRSLKCGASGYLTKSADPEELLKAVDKII 122 Query: 122 SGYTFFPSETLNYIKSNKCSTNS-STVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 G + P + + LS RE + + G S EI+ +L +S KT Sbjct: 123 KGGKYLPHTFSEKLLHYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKELSISIKT 182 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 VS +++ I KLGL + E+I+YA + LI Sbjct: 183 VSTYRARILEKLGLENNAEIINYAIKHGLI 212 >UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EAN1pec RepID=A8L9Z7_FRASN Length = 218 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 2/209 (0%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 V++ D H ++ + L+ L +V + +D T D+++MDI++PG Sbjct: 7 TIRVLLADDHRLVLDGLSALIDSVDGLTVVGEATSGEQAVDLAGTEHPDVVLMDIEMPGI 66 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G +RI Q T+ V+ L+ E + A++AGA G++ K Q D+ + + Sbjct: 67 GGVEATRRITTAQPTIAVVMLTMYGEDEFVFAALRAGARGYLLKGAQQKDVVRTIGAVAR 126 Query: 123 GYTFFPSETLNYIKSNKCSTNSS--TVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 G F + + + S + L+ RE +L L +G N IA L L+ KT Sbjct: 127 GDAVFGPDVAHRVLRTFTSPPAENAPFPELTEREREVLSLLANGWPNSRIARHLQLTPKT 186 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 V+ + SNI KL I A+ L Sbjct: 187 VANNVSNILAKLHAPDRTAAILRARRAGL 215 >UniRef50_C3JVF4 Two component transcriptional regulator, LuxR family n=2 Tax=Rhodococcus erythropolis RepID=C3JVF4_RHOER Length = 220 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 8/215 (3%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I D ++R E+ L + E+++V + +R D+++MDI +P D Sbjct: 2 IDVLIADDQQVVRQGFELFLSGHPEIRVVGHAKTGVEAYEQVRALRPDVVLMDIRMPHGD 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G T + + +V+ +++ Y A+ +GA GF+ K D ++ AV + G Sbjct: 62 GLTATREVLAEFPGTRVIVITTFDLDEYVFEALDSGAAGFLLKDADPEELSSAVLTVAEG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTV--------LSNREVTILRYLVSGLSNKEIADKLL 175 + + + + ++ LS RE+ +++ L GL N +IAD L Sbjct: 122 GSVLSPRLTSRLIVEFARRKPAPMSTARSGSDHGLSAREMDVVQLLSQGLGNNDIADSLS 181 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 L TV +H SNI KL + + V+++ +A +I Sbjct: 182 LEQSTVKSHISNICKKLQVRTRVQIVIWAYRNNVI 216 >UniRef50_C1RMQ2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1RMQ2_9CELL Length = 254 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 7/216 (3%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 T+V+++D P+IR I +L+ +++V + D + R D+ +MD+ +PG Sbjct: 8 SATTVLVVDDQPLIRQGIRAVLRGQPGVEVVGEAHDGHSAVRTARRLRPDVTLMDVQMPG 67 Query: 62 TDGFTFLKRIKQ-IQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 DG + I V+ L+ + + A++AGA G V K +++ A+ Sbjct: 68 MDGVEATRVICADDDPPTSVVVLTMYDQDEHVFEALRAGARGLVLKDAPTSELVAAIHAA 127 Query: 121 LSGYTFFPSETLNYIKSNKCSTN------SSTVTVLSNREVTILRYLVSGLSNKEIADKL 174 +G + + + L+ RE + R LV GLS E A++L Sbjct: 128 AAGDSLLSPSVTRRLIEEFARRPTVRMEATDGPAELTARERDVFRLLVQGLSTAEAAERL 187 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 L + TV +H ++Y KLG+ V+ + YA + L+ Sbjct: 188 TLGDSTVKSHVQSLYRKLGVRDRVQAVIYAYEHGLV 223 >UniRef50_A9AZR3 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZR3_HERA2 Length = 213 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 56/205 (27%), Positives = 107/205 (52%), Gaps = 1/205 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++++D H I+R + LL +++E IV + + I+ +I+MD+ +P D Sbjct: 5 IRIMLVDDHAIVREGLRTLLAEDTEFLIVGEAQNGADAIELAAVVRPHVILMDLVMPNVD 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + ++ + + +++ L+S S+ + +AIQAGA+G++ K + ++F A++ + +G Sbjct: 65 GIQATQALQSLMPSSRIIVLTSFSDDQWVSKAIQAGASGYLLKNVLKAELFLAIRTVANG 124 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 F +E + + S + L+ RE ++L +V GLSNKEIA L L+ TV Sbjct: 125 QPFLHAE-AQRTLMRQSTAPPSLLPSLTERERSVLDGIVGGLSNKEIARSLHLTEGTVKG 183 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYE 208 + S I KL + + YA + Sbjct: 184 YVSTILTKLAVADRTQAALYAIKHG 208 >UniRef50_Q13QW9 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=Q13QW9_BURXL Length = 220 Score = 266 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 98/206 (47%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 SV+++D H ++R LL+ N+++ + + D D+++MD+ LPG Sbjct: 6 ISVLLVDDHAVVREGYRRLLELNADVHVCGEAADAAQAYQRFCALRPDVVVMDVSLPGAS 65 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++R+ + +VL S E + RA+ AGA G+V+K + + + AV+ I Sbjct: 66 GIEAMRRMLAREPDARVLIFSVHEEAIFVRRALDAGALGYVTKASAPDVLVEAVRTIARR 125 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + + + + LS RE +LR LV G + IA+KL LS KTV+ Sbjct: 126 AGYLSPDISQALALRNAFSEGPPGRQLSAREFEVLRLLVQGYTLPSIAEKLGLSQKTVAN 185 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYEL 209 H+S I K G + V+L A L Sbjct: 186 HQSVIRQKFGADNGVQLAQMASRLGL 211 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 266 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 60/211 (28%), Positives = 109/211 (51%), Gaps = 2/211 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M T V+I+D H ++R + ++L + +++V + + D+++MD+ +P Sbjct: 1 MAHTRVVIVDDHALVRQGLRLILHGVAGIEVVGECSCGEDALKAAVKDRPDVMLMDVHMP 60 Query: 61 -GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 G DG T + ++QI V+V+ L+ + + + + AG +G V K +D ++I A+Q Sbjct: 61 QGLDGITTARHLRQIAPQVRVIMLTMFDDRVHVEKMLDAGVSGIVFKHDDSSEIVAAIQH 120 Query: 120 ILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 G+ + + + + S T LS RE +L L G +N+E+AD L +S K Sbjct: 121 GQPGHPYLSRRWGQR-ANAETVSPSRTAERLSPRETEVLVLLAQGYTNREVADALHISVK 179 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H+ +I ++GLHS L+ YA L+ Sbjct: 180 TVETHRQHIMRRIGLHSRAALVRYAYQNGLV 210 >UniRef50_D1B9T1 Two component transcriptional regulator, LuxR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9T1_THEAS Length = 227 Score = 266 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 106/211 (50%), Gaps = 2/211 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M+ +++ D H + R + LL+ +++++ + +D T++ + D+++ DI +P Sbjct: 1 MRKIRIVLADDHRLFRDGLRRLLEMEKDMEVIGEAEDGDATVEMVSALKPDVLLFDIHMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 DG +K +K + + + + +++ + + G + +V K + ++ A++ + Sbjct: 61 KKDGIQVVKDLKAMGCSPRFVAITAFDDDDHITALSSVGIDAYVLKASGMAELLSAIRSV 120 Query: 121 LSGYTFFPSETLNYIKS--NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 G+++ + + S N+ ++ L+ RE+ +L ++ GL+N EIA K++LS Sbjct: 121 YRGHSYVDPKVAGKLLSTFNRRREERDLLSRLTPREMEVLYWISQGLNNGEIARKMVLSE 180 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 KTV H S+I KL L + +A L Sbjct: 181 KTVKNHVSHILKKLDLVDRTQAAVFAWKRGL 211 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 266 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 106/207 (51%), Gaps = 3/207 (1%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 V+I D H + R I+ LL+ Q+V + + + ++ + DL++MD+ +P G Sbjct: 1440 RVVIADDHALFRDGIKSLLESE-GFQMVGEASNGQEAVELVHNLSPDLVLMDLSMPVMGG 1498 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 ++ I + +VKV+ L++ E AI+AGA GF+ K + + F ++ ++ G Sbjct: 1499 LDAIRLISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQLLRNVIRGE 1558 Query: 125 TFFPSETLNYIKSNKCST-NSSTVTVLSNREVTILRYLVSGL-SNKEIADKLLLSNKTVS 182 + SS++ +L++RE IL+ LV+G+ S K+++ +L +S TV Sbjct: 1559 PAITPRLAGKLIDEFSRPVRSSSLQMLTDREQEILQLLVNGVTSTKDLSRQLGVSEHTVK 1618 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYEL 209 H NI KL L S +++ +A + L Sbjct: 1619 YHLRNILSKLHLQSRAQVVAWAVQHGL 1645 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 266 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 56/209 (26%), Positives = 114/209 (54%), Gaps = 2/209 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +++I D H +IR ++ LL+ + +++++ + ++ +D L+T D++++DI++P + Sbjct: 3 INIMITDDHSMIREGLKNLLELDGDIKVIAEAENGEDCLDKLKTFRPDVLLLDINMPKMN 62 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G LK +K +S VKVL L+ +E Y +A+ G NG+V K ++ ++ A+ I G Sbjct: 63 GLEVLKALKDRKSKVKVLVLTVHNETEYLMKAVDIGINGYVLKDSESAELKKAIFTIADG 122 Query: 124 YTFFPSETLNYIKSNKCSTNSSTV--TVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 T+ + + S N + L+ RE+ +L+ + G N++IA ++ +S +TV Sbjct: 123 ETYIQPSLIPALNSKMIQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISERTV 182 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 H S+I+ KL + + +A +I Sbjct: 183 KNHISSIFKKLEVTDRTQAAVFAIRNNII 211 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 66/214 (30%), Positives = 112/214 (52%), Gaps = 4/214 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MK S+II D H +IR I+ LLQ E ++V + D I ++ T +++++DI +P Sbjct: 2 MKKISIIIADDHTLIRDGIKSLLQSVDEFEVVGEATDGDELIQFIDTLDPEIVVLDITMP 61 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G + +K+ + VK + LS Y +++Q+GA ++ K D +I AV+ + Sbjct: 62 KKSGIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAVKAV 121 Query: 121 LSGYTFFPSETLNYIKSNKCSTN----SSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 +G +F + + I + + S L+ RE+ +L+ + GLS K IADKL + Sbjct: 122 SAGQKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIADKLFI 181 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S +TV H+ N+ KL +H+ ELI A +I Sbjct: 182 SVRTVETHRINLMKKLDVHNSAELIKKAMDLNII 215 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 6/210 (2%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 V+I+D H ++R + +L +L+++ + + + ++ + DL++MDI++P DG Sbjct: 2 KVLIVDDHLMLRKGVLSVLSNT-DLEVIGEASNGQEALELVPKLKPDLVLMDINMPVLDG 60 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 +++KQ+ +KV+ L+ AI+AGA+G++ K ++ +++ +SG Sbjct: 61 VEATRKLKQMYPDLKVVILTVSEIDKDLFEAIKAGADGYLLKNLGPEELVSSLRAAISGE 120 Query: 125 TFFPSETLNYIKSNKCSTNSS-----TVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 S + ++ LS RE+ +LR +GL+ KEIA KL ++ Sbjct: 121 APISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAKLYVAES 180 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 TV H +I KL L + E + YA L Sbjct: 181 TVKNHMRHILEKLHLRNRSEAVGYAIRTGL 210 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 7/215 (3%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRP------VDLIIM 55 + V+++D H I+R + L+ +L++V + D + +D L R +++M Sbjct: 9 ETVRVMVVDDHAIVRRGLRAYLETVPDLRLVSEAADGQEAVDLLNERHVVGDPMPHVVLM 68 Query: 56 DIDLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFH 115 D+ +P DG + I VKV+ L+S SE A+ AGA G+V K + ++ Sbjct: 69 DLQMPRLDGIEATRSILASYPDVKVVVLTSFSEAERVHAALSAGAAGYVLKDAEPEEVAT 128 Query: 116 AVQMILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 AV+ + G + + S VT L+ RE IL + GLSN+EIAD+L+ Sbjct: 129 AVRAAVKGEVHLDAAVARLLARRMASPQVG-VTSLTARERDILVLVGQGLSNREIADRLV 187 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S +T H SN+ KL L S + A L+ Sbjct: 188 ISERTARTHVSNVLSKLQLSSRTQAALLAIREGLV 222 >UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR family n=29 Tax=Gammaproteobacteria RepID=Q1QVM5_CHRSD Length = 214 Score = 265 bits (680), Expect = 5e-70, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 109/207 (52%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V++ D H ++R SI +L L+++ + D ++ R D+++MDI +PG Sbjct: 2 IKVLVADDHHLVRTSIARMLDSEDGLKVIAEAVDGEEAVNMARELRPDIVLMDIRMPGIG 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++I + S +KV+ +++ E +A R + AGA GF+SK + +++ A++ I G Sbjct: 62 GLEATRKIMRGMSDIKVVIVTAFLEEAFAQRLMDAGAAGFISKGTELDEMVRAIRAIFDG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + + + +K T + LS+RE+ + +V+ +I+D+L LS KTV+ Sbjct: 122 QRYISPDIAQKVVLSKMGTQDNPFDQLSHRELQVAMMIVNCQKVSDISDRLFLSPKTVNT 181 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 ++ I+ KL + S VEL Y LI Sbjct: 182 YRYRIFEKLNVQSDVELTHLGLRYGLI 208 >UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomycetales RepID=A4XCA4_SALTO Length = 235 Score = 265 bits (680), Expect = 6e-70, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 6/212 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D P++R ++ +++ + ++ I + + + R D+++MD+ +PG Sbjct: 3 IEVLVVDDQPLVRSALRMVVAEVDDMVIAGEAETGEEAVRLTRELKPDVVLMDLRMPGMG 62 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +I ++ +VL L++ E + A+QAGA GF+ K +DI AV+ + G Sbjct: 63 GIEATGQIVRLSPETRVLVLTTFDEDDHVFGALQAGAAGFLIKNMSLDDILDAVRTVAHG 122 Query: 124 YTFFPSETLNYIKSNKCST------NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 + + T ++ ++ RE +L + GLSN EIAD+L LS Sbjct: 123 NGLLAPSVTRRLIKHVVDTRTAPTVPRRPLSGITEREREVLTLVGRGLSNSEIADELRLS 182 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 + TV + + + KLG V L+ A L Sbjct: 183 HATVKTYITRLLSKLGARDRVHLVIAAYEAGL 214 >UniRef50_B2JSN3 Two component transcriptional regulator, LuxR family n=28 Tax=Proteobacteria RepID=B2JSN3_BURP8 Length = 210 Score = 265 bits (680), Expect = 6e-70, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 113/207 (54%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++I D H I+R ++ ++ +++ + + +D LRT VDL+++D+ +PG Sbjct: 2 IRILIADDHAIVRGGLKQIIATTNDIVVAAEAAQGSEVVDKLRTCAVDLLLLDMTMPGIS 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++R++ Q + VL LS E A RA++AGA G+++K +D + + A++ + G Sbjct: 62 GVDLIRRVRAEQPALPVLVLSIHDEAQVASRALRAGATGYLTKDSDPDVLLAAIRKLADG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 F + ++ + + VLS+RE +L+ L +G S EIAD LS KT+S Sbjct: 122 GRFIDPKLVDAMVFETHRGDMPPHEVLSDREFQVLQMLAAGKSINEIADICALSAKTIST 181 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 HK + KLGL + E+I YA + LI Sbjct: 182 HKMRLMQKLGLANNAEVIRYAIRHGLI 208 >UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K960_AZOSB Length = 209 Score = 265 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 1/207 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I D H ++R + L E IV + + + ++ +RT D++++DI LP + Sbjct: 2 VKVLIADDHAVVRGGLRQFLSSTEEFDIVAEAANGQTALELVRTSGCDVVLLDITLPDLN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G LKRIK+ + + VL S SE +A A+ AGA+G+++K + I A+ +++G Sbjct: 62 GLEVLKRIKRSKPDLPVLIFSMFSEDEFALPALNAGASGYLNKDSPPAQILAALHTVVAG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSS-TVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + + + S LS RE+ +L L G+ I ++ LS KT+S Sbjct: 122 ARYVSPSLAERLLAGTMSPGKRLPHENLSPREMAVLLLLSKGVPLTRIGEQFHLSVKTIS 181 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYEL 209 +++ I KL L S E+ Y ++L Sbjct: 182 TYRARILEKLDLASNAEITRYVLQHKL 208 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 2/207 (0%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 V+++D H ++R + + L + +++V + + + ++++MD+ +P Sbjct: 13 TVRVLLVDDHAVVRQGLRLFLGLDEGIEVVGEAANGEEALQEAERLRPEVVVMDLMMPVM 72 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG T + +++ +V+ L+S E AI+AGA ++ K + + A+ Sbjct: 73 DGITATRELRRRLPDTEVIALTSTLEENKVNGAIEAGAISYMLKDASSDTLADAIHAAAR 132 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G E + + S L+ +E +L+ L G SNK+IA + +S TV Sbjct: 133 GEVRLHPEAARRLVRDFRSPEMR--ESLTPKETAVLQLLARGQSNKDIAAEQGVSEATVK 190 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYEL 209 H S + KLGL S + YA Y + Sbjct: 191 THVSRLLSKLGLDSRTQAALYALKYGI 217 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 7/217 (3%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M V+I+D HP+ R ++ L+++++ Q V + + + DL+ MD+ LP Sbjct: 1 MGKKRVLIVDDHPLFREGVKSLVERSANYQAVGEAGCGAEALALAQELKPDLVTMDVSLP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G ++ I + ++L LS + Y A +AGA G+V K + + Sbjct: 61 DMSGIEVVRGILDLAPETRILMLSMYPKFDYVAEAFKAGAKGYVVKETTTARLIQGFDAL 120 Query: 121 LSGYTFFPSETLNYIKSNKCST-------NSSTVTVLSNREVTILRYLVSGLSNKEIADK 173 G F + + + +L+ RE +LR + G S ++IA Sbjct: 121 CRGEFFVDGQVSQDLVAKLAQGAARDQALQDEKYGLLTPREQQVLRLVAEGSSTRQIAAA 180 Query: 174 LLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 + LS KTV H++N+ KL +HS +EL+ YA LI Sbjct: 181 IELSPKTVENHRTNLMKKLDVHSKMELVKYAARLGLI 217 >UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92 Tax=Burkholderiales RepID=Q3JFS6_BURP1 Length = 282 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 60/208 (28%), Positives = 113/208 (54%), Gaps = 1/208 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I D H ++R + +LQ S ++ + D TI +R+ P ++++D+ +PG + Sbjct: 69 IKVLIADDHALVRDGLRHILQNASGYEVAGEAFDSATTIALVRSTPAQVLVLDLSMPGRN 128 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +K+IK+ + +++L L+ +E YA RA +AGA+G+++K + +++ AV + SG Sbjct: 129 GVELIKQIKEEKPALRILVLTMHAEQQYAVRAFRAGASGYLTKESASSELVGAVTKVASG 188 Query: 124 YTFFPSETLNYIKSNKCSTNSS-TVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + + + LS+RE + R + SG + +IAD+L +S KTVS Sbjct: 189 GVYVSLAMAERFAQSLNEPAETLPHHRLSDREFDVFRRIASGQTLTQIADELCVSAKTVS 248 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 +K+ I K+ + L+ YA ++LI Sbjct: 249 TYKTRILEKMQMPHEAALVRYALRHKLI 276 >UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYF0_9SPHI Length = 218 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 7/215 (3%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P V I D H + R + +L+ + +++V D+ + ID + +P D+I+MD+ +P Sbjct: 2 PVKVAIADDHVLFRKGLVTILELDDNIEVVYGADNGKELIDKVDAQPPDVILMDLKMPVM 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG K IK VKVL LS E + ++ GANG++ K D +++ HA+ +++ Sbjct: 62 DGMEATKIIKAKYPEVKVLVLSMYDEEKFIIHCLELGANGYLLKNTDPDELVHAIGTVMA 121 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVT-------VLSNREVTILRYLVSGLSNKEIADKLL 175 +F + + + L+ RE +L + L+ E+A+KL Sbjct: 122 KDFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMAEKLF 181 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +SN+TV H+ N+ K G + L+ +A EL+ Sbjct: 182 ISNRTVEGHRKNLLEKTGAKNTAGLVVFALKNELV 216 >UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 Tax=Methylococcus capsulatus RepID=Q60AR8_METCA Length = 215 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 56/212 (26%), Positives = 104/212 (49%), Gaps = 3/212 (1%) Query: 1 MK-PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDL 59 MK +V+++D H ++R +LL +++V + + D+I+MD+ L Sbjct: 1 MKSKITVMLVDDHAVVRAGYRLLLSGTPNIEVVGEAERGEEACQLYADTRPDVIVMDLSL 60 Query: 60 PGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 PG G ++RI+ ++ ++L S E Y RA++AGA G+++K + AV Sbjct: 61 PGIGGLASIRRIRSRDTSARILVFSIHDELIYVVRALEAGARGYITKSCAPEILVEAVAR 120 Query: 120 ILSGYTFFPSETLNYIKSNK--CSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 I SG +F E + + ++ + LS RE + L G + +E+A++L L Sbjct: 121 IASGESFLEPEIAQRLAMQTLGGAEATTALNTLSAREFDVFLLLAKGYTTREVAEELRLG 180 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 KTV+ + + I KLG+++ E+ A + Sbjct: 181 YKTVANYSTLIKSKLGVNTTAEMARLAYQNGI 212 >UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobacteria RepID=Q5ZS73_LEGPH Length = 225 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 55/208 (26%), Positives = 119/208 (57%), Gaps = 1/208 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I+D H ++RM I LL+ S++ +V + + Y++T D++++D+ +PG D Sbjct: 8 IKVLIVDDHALVRMGIRRLLEDMSDVDVVADAESGEQALAYVKTHSPDVVLLDMKMPGID 67 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G+ +R+K+ +KV+ +++ R +Q GA G+++K + ++ A++ + G Sbjct: 68 GWEVTRRLKKTNPNIKVIAVTAICSDPLPTRVLQLGAMGYLTKESGAEEMAAAIRKVAKG 127 Query: 124 YTFFPSETLNYIK-SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + +E + ++ + S +LS RE+ ++ + SG++ ++IAD+L LS+KT++ Sbjct: 128 EKYLSAEIAQKMAINSLQESQDSPFDLLSEREMQVMLMITSGMNVQDIADRLFLSSKTIN 187 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 ++ ++ KLG+ + VEL A + +I Sbjct: 188 GYRYRMFEKLGIKNDVELTYLAMKHRII 215 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 108/212 (50%), Gaps = 5/212 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 SV+++D H ++ + +LL ++++ + + +D + + D++++D+ LP Sbjct: 2 TISVLVVDDHAVLGKGLSMLLNSQDDMEVCGQVGTAKEALDTCKEKCPDVVLLDLSLPDK 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G +K +K+ + +VL L+ + Y R ++AG +G++ K +++ A++ + Sbjct: 62 QGHEIIKELKESC-SARVLALTMHEDEAYFKRVVEAGGDGYILKKAADDELISAIRSVYQ 120 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTV----LSNREVTILRYLVSGLSNKEIADKLLLSN 178 G + + + + T LS+RE +L+ + G +NKEIA+KL +S Sbjct: 121 GEVIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKLYISI 180 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 KTV H + I KLGL+ EL+ YA +I Sbjct: 181 KTVETHIARIKEKLGLNRRSELVRYAMRNNII 212 >UniRef50_C4DCK3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Actinomycetales RepID=C4DCK3_9ACTO Length = 214 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 104/209 (49%), Gaps = 4/209 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D +IR + +L + +++++V + D + + DL++MD+ +PG D Sbjct: 2 IRVLLVDDQRLIRAGLRMLCEPAADIEVVGEADGGQAAVRLAGELCPDLVLMDLRMPGMD 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G T +RI + + +V+ L++ + + A+ AGA GF+ K N++ A++ G Sbjct: 62 GITATQRILAERPSTRVVALTTFDDDDHLYPALAAGACGFLVKDTSPNELLEAIRKAADG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSS----TVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 T F + + I + +S T+ L+ RE +L + +G +N +IA++L L Sbjct: 122 DTPFSAGVVKRIVDSAVRARASVPTATLPKLTTREREVLALVGAGYANVDIAERLHLGVT 181 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYE 208 TV H +++ K G + V L A Sbjct: 182 TVKTHIASLMTKTGCSNRVRLAVLAVRSG 210 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 6/212 (2%) Query: 1 MKPTS--VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDID 58 MK V+++D H + R +L++ ++ +V + + +++MDI Sbjct: 1 MKAARIAVLVVDDHTLHRDGTRRILEQYDDVDVVGDAASGEDALAMVNRLHPRVVLMDIR 60 Query: 59 LPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQ 118 LPG +G +RI++ +VL +++ + Y A GA G++SK ++ AV+ Sbjct: 61 LPGMNGIEATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVR 120 Query: 119 MILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 + G + + + + SS L++RE +LR L G+ NK+IA +L +S Sbjct: 121 AVAGGNSVLQPTLMAALL----AKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISA 176 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +TV H IYGKLG+ S E + A L+ Sbjct: 177 RTVERHCDRIYGKLGVTSRTEAVVRAISANLL 208 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 6/195 (3%) Query: 22 LLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFTFLKRIKQIQSTVKVL 81 +LQ +L++V + ++ + D++IMDI LP G + IK+ +V+ Sbjct: 1 MLQSEPDLELVGEAGRGEEAVELTKALKPDVVIMDISLPDMSGIEATRLIKEAVPETRVI 60 Query: 82 FLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTFFPSETLNYIKSNKCS 141 L+ E + ++AGA+ ++ K + D+ A++ ++ G + S Sbjct: 61 GLTMHEEEPFVLEFLRAGADAYIVKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEGYVS 120 Query: 142 TNSSTVTV------LSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHKSNIYGKLGLH 195 V L+ RE IL + GL+N EIA +L +S KTV H+SN+ KLG+H Sbjct: 121 RPGRAVGQPEEPCPLTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKLGIH 180 Query: 196 SIVELIDYAKLYELI 210 EL+ YA L+ Sbjct: 181 DRTELVRYAIRQGLV 195 >UniRef50_C5VAN3 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VAN3_9CORY Length = 215 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 3/210 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I D +IR + +LQ + +++++ + + + D++ MDI +PG D Sbjct: 5 IRVVIADDEALIRAGLATILQASGDIEVIGEASTGEEALTVAQRLQPDVVCMDIRMPGGD 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +RI+Q++ V+ +++ Y A++AGA G + K + D+ V+ G Sbjct: 65 GLEATRRIQQLEPAPAVIVITTFDMDEYVFGALEAGACGILLKDSSMTDLVEGVRRAALG 124 Query: 124 YTFFPSETLNYIKSNKCSTNS---STVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 + + + S S+ VL+ RE+ + L G+SN EIA L L T Sbjct: 125 EGLVDASLTRRVIAEFTRRKSIFTSSSEVLTPRELDCVAQLCQGMSNNEIATTLFLEPST 184 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V H S+ K G H+ V+L+ +A ++ Sbjct: 185 VKTHLSSAMAKTGTHNRVQLVIWAFRNGVV 214 >UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0G6_SYNWW Length = 213 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 54/211 (25%), Positives = 106/211 (50%), Gaps = 2/211 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M V+I D H ++R + LL+ +S ++++ + D + I+ R D+IIMD+++P Sbjct: 1 MDKARVVIADDHVLVREGLRKLLELDSNIKVIDEVGDGQGAINIARKEKPDIIIMDVNMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 GTDG + IK+ +V+++ L+ ++AGA+ ++ K +++ + + Sbjct: 61 GTDGIVATRVIKRELPSVRIIALTVYEGEE-VVDMVKAGASAYILKDVAGSELVDTIHRV 119 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVT-VLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 ++G N + + + L+ RE +L LV G +NKE+A+ + +S K Sbjct: 120 MNGEVVIYPRVANRLVRELRQSENRKSEIRLTKREKDVLTLLVKGNTNKEMAEVMFISEK 179 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H ++I+ KLG+ YA ++ Sbjct: 180 TVKNHLTSIFRKLGVKDRTHAAIYALKNRIV 210 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 1/208 (0%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 ++I + ++R + LL ++ IV + +D + I+ RT D+++MD+ +P Sbjct: 2 TVRILIAEDQQLVRQGLVALL-AVDDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMPEL 60 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG +RIKQ+ V+VL L+ + A+ AGA+G+ K ++ A+ + + Sbjct: 61 DGVEATRRIKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLGHGELMAAINAVCA 120 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G T+ + + L+ RE +L+ + G N+EIAD+L ++ KTV Sbjct: 121 GKTYLGPGLSEDLVKEYLEGSDMGGGSLTAREREVLQLIARGHKNREIADELGIAIKTVE 180 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 H++ I KL LH+ EL YA LI Sbjct: 181 THRTKIMQKLDLHNSAELAAYAIRRGLI 208 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 6/210 (2%) Query: 7 IIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFT 66 ++ D H ++R + L++ + + + + R + + D++++D+ +P +G Sbjct: 1 MVADDHEVVRRGVRALVESHPGWTVCGEASNGREAVRLAQELRPDVVVLDVTMPELNGLE 60 Query: 67 FLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTF 126 + I+ +++ L+ G+A+ AGA G+V K + + A+ + + Sbjct: 61 ATREIRASVPDTEIILLTVHDSDQLLGQALDAGARGYVLKEDAARHLVDAIDALSKHAPY 120 Query: 127 FPSETLNYIKSNKCST------NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 PS + VT L+ RE +LR L G SN+E+A +L +S KT Sbjct: 121 VPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLSISAKT 180 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V H++N+ KLG SIV+L+ YA ++ Sbjct: 181 VETHRANVMRKLGASSIVDLVHYAIRNGIV 210 >UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC-HTH domains) n=7 Tax=Bacteria RepID=B3DW63_METI4 Length = 243 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 4/207 (1%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 V+I+D H I+R + L+ L + + + + D++++DI LPG G Sbjct: 20 KVLIVDDHAILREGLIQLINSTPGLSVCGAAKNAHEGFELIEKTMPDVVLVDISLPGKSG 79 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 +K I + +L LS E YA R ++AGA G++ K + A+Q +L+G Sbjct: 80 LELIKDIHAAYPDIALLVLSMHEESLYAERVLRAGARGYLMKNEGGQKLIAAIQKVLAGG 139 Query: 125 TFFPSETLNYIKSNKCSTNS----STVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 N I S + LS+RE + + + G +++IA++L LS KT Sbjct: 140 ISVSERVANRILQGVSGKRKALSISPIEALSDREFEVFQLIGKGYGSRQIAEQLSLSVKT 199 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLY 207 V A++++I KL L S +L+ YA + Sbjct: 200 VEAYRASIKQKLYLKSGPQLVHYAISW 226 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 106/209 (50%), Gaps = 2/209 (0%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 +++ D H + R ++ +L+K ++IV + + ID + +PVD+ +DI +PG Sbjct: 2 TIRIVLADDHQMFRHALRAMLEKEPGIRIVGEASNGDELIDLISHQPVDIACVDIGMPGM 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +G +R+ I+ V+V+ LS+ S+ + + AGA G+V+K ++ A+ + Sbjct: 62 NGIEATRRLLAIRPHVRVIGLSAFSDRQFVLDLLNAGATGYVTKAEAGEELLRAIHTVQQ 121 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVT--VLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 T+ + + + ++ ++ RE +L+ + G ++ IAD+L L+ T Sbjct: 122 SKTYLCPDVAATVTNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRLHLAPST 181 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 V H+ NI KL LHS+ EL YA + Sbjct: 182 VEVHRRNIMRKLDLHSVAELTKYAIRSGI 210 >UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridium RepID=C5RGJ7_CLOCL Length = 220 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 58/218 (26%), Positives = 107/218 (49%), Gaps = 12/218 (5%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +VII D I+R I+++L E+ ++ + ++ I+ L+ D+I+MD+ +P D Sbjct: 2 INVIIADDQKIVREGIKMILSLYDEINVIGEAENGEELINLLQNFMADVILMDVRMPIID 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G K IK+ KV+ L++ +E Y +AI+ GA+G++ K I +A++ + +G Sbjct: 62 GVEATKIIKERYIHTKVIILTTFNEDEYIFKAIKNGADGYLLKDVGSEFIINAIRSVYNG 121 Query: 124 YTFFPSETLNYIK------------SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIA 171 E + SN+ ++ + L+ RE+ + + + G SNK+I Sbjct: 122 AMLLDPEVTVKVVKAFNSITNESKNSNEFDNINNKLNSLTPREIDVAKLVAQGKSNKDIC 181 Query: 172 DKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 L L+ TV + + I GKL L+S EL + + Sbjct: 182 RSLFLTEGTVKNYVTRILGKLELNSRTELAVFINQAGI 219 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 3/209 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I D H ++R + L+ +++ + D + D+I++D+ +PG D Sbjct: 8 IRVLIADDHRMVRQGLRTFLELQEGIEVAGEAADGAECAERAAELEPDVILLDLVMPGVD 67 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++ +++ ST +VL ++S ++ AI+AGA G+V K D + AV+ + +G Sbjct: 68 GVGAMELLREAGSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAVRSVHAG 127 Query: 124 YTFFPSETLNYIKS---NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 + E + N + L+ RE +L + G +N+EIA L+L+ KT Sbjct: 128 HVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARALVLAEKT 187 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 V H SNI KLG+ + +A + + Sbjct: 188 VKTHVSNILMKLGVADRTQAALWAVRHGI 216 >UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7Q7_9GAMM Length = 226 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 104/207 (50%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +++++D H I+R LLQK L+++ + D + D+++MDI LPG Sbjct: 5 ITIMLVDDHAIVREGYRSLLQKQDNLEVIAEACDGTEAYSQYKKYQPDIVVMDISLPGQS 64 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++RI+Q + K+L S +A +A +AGA G+++K +D D+ A+ + Sbjct: 65 GLKAIERIRQFDAKAKILVFSMHQNPSFALQATRAGALGYITKSSDPEDLIRAIAEVAKN 124 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 ++ + K S + L+ RE ILR LV SN++IA+ L +S KTVS Sbjct: 125 KHTLSADIAQALAMEKLGQEQSALDELTVREFEILRLLVDAKSNQDIAELLNISPKTVSN 184 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 I KLG+ S +EL A L+ Sbjct: 185 SHYIIKKKLGVSSDIELTRLAIKMNLV 211 >UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID=Q9RPE7_CORDI Length = 233 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 96/221 (43%), Gaps = 14/221 (6%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +V ++D ++R ++L S++ + + +D + ++ PVD+I+MD+ +P D Sbjct: 2 ITVGLVDDQQLVRAGFRMVLDSQSDITVAWEANDGKEALENAANTPVDVILMDVQMPVMD 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G KRI + +++ L++ Y A++ GA+GF+ K D+ AV+ + Sbjct: 62 GLEATKRIVATNTDTRIIVLTTFDSENYVVGAVEHGASGFLLKDTAPEDLIAAVRTVGEQ 121 Query: 124 YTFFPSETLNYIKSNKCSTNSST--------------VTVLSNREVTILRYLVSGLSNKE 169 + + T + L+ RE IL + G SN E Sbjct: 122 SAVISPAATAVLFKSMRGHAPQTDLVATPGGDINAGLIDPLTPREQEILLLIALGKSNTE 181 Query: 170 IADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 IA++L +S TV H S + K G V + +A L+ Sbjct: 182 IAEELFISLPTVKTHVSKVLSKTGSRDRVHAVLFAFSRGLV 222 >UniRef50_B9XAM6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=B9XAM6_9BACT Length = 209 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 9/213 (4%) Query: 1 MKP---TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDI 57 MK ++I D H ++RM + L+ ++++V + D ++ DL +MD+ Sbjct: 1 MKKEGKIRILIADDHYVVRMGLIALVNTEPDMEVVAEAADGAQALELFAKCNPDLALMDL 60 Query: 58 DLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAV 117 +P G I+ +T VL L++ +A+QAGA G+V K + + A+ Sbjct: 61 RMPVKSGVQATLEIRNRFATACVLMLTAFDGDEDIHKALQAGAQGYVLKSSTGEKLIPAL 120 Query: 118 QMILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 + + +G + P E N + ++ LS REV +L L GL+NKEIAD L ++ Sbjct: 121 RAVAAGQRWIPKEVANRLALR------NSFEQLSPREVQVLSELARGLANKEIADVLNIT 174 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 T H +I KL + E + A +I Sbjct: 175 EHTTKDHLKSILAKLRVADRTEAVTVALQRGII 207 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 5/214 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPV----DLIIMDI 57 V+I+D H ++R + L + ++V + + I L D+I+MD+ Sbjct: 5 NTLKVMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVILMDL 64 Query: 58 DLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAV 117 +PG DG +++ +K++ L+S E AI+AGA +V K ++ +A+ Sbjct: 65 MMPGMDGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEELIYAL 124 Query: 118 QMILSGYTFFPSETLNYIKSN-KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 + G ++ + + T S L+ RE +L + G SNKEI ++L + Sbjct: 125 HGAVKGMPVMTADVSQALTRGLRQRTAQSGDEELTEREKEVLLLIAEGRSNKEIGEELHI 184 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S KTV H SN+ K L +L A + Sbjct: 185 SVKTVKTHVSNLLMKCELEDRTQLAVLAHRKGWV 218 >UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NMF3_GLOVI Length = 212 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 101/210 (48%), Gaps = 3/210 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 T ++I++ H ++R+ + +L + E ++ + D + R+ DL++MD+ LP Sbjct: 2 TRILIVEDHALMRIGLRQVLSQTPEYEVAGEAADGEQALALARSLQPDLVLMDLGLPVMS 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCND--QNDIFHAVQMIL 121 G + +K+ ++VL L+S E A+ AGA+G+ K + + AV + Sbjct: 62 GTEVTRILKREYPAMRVLALTSHDEDESVFGALAAGADGYCLKATAGIASRLLAAVASVR 121 Query: 122 SGYTFFPSETLNYIKSNKCS-TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 G + + + + + + LS RE+ +L+ + GL+N EI +L +++ T Sbjct: 122 DGAAWLDPDIADRVLRDLGRIPQAGADNPLSEREMEVLKLIADGLTNAEIGRRLYIASGT 181 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V H SNI KLG++ V+ A I Sbjct: 182 VRVHVSNIIAKLGVNDRVQAAVRALREGWI 211 >UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XAQ5_9BACT Length = 229 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 4/210 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K T ++++D HP++R + ++ +L + + ++ ++ +++ DL++ DI LP Sbjct: 11 KATKILLVDDHPMMREGLRQIIGNEIDLAVCGEAENAFQALELVKSEKPDLVLADITLPD 70 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G LK ++ + VL +S E YA R ++AG G++ K I A++ +L Sbjct: 71 KNGLELLKDLQAQHPKLPVLVISMHDEALYAERVLRAGGRGYIMKHEGGKKIMQAIRHVL 130 Query: 122 SGYTFFPSETLNYIK----SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 SG F + I + SS + L++RE + R + GLS KEIA + +S Sbjct: 131 SGQIFVSEKMSARILELFSGHGTQAASSPIENLTDREFEVFRLIGEGLSTKEIAANMHVS 190 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLY 207 KTV H+ NI KLGL + ELI Y + Sbjct: 191 AKTVEVHRMNIKTKLGLKTAAELIRYTVRW 220 >UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7V6_ACAM1 Length = 222 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 109/219 (49%), Gaps = 10/219 (4%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +P +++++ H ++RM ++ S+ +++ + ++ + ID ++++MDI+LP Sbjct: 4 QPIHLLLVEDHALMRMGLKGQFSLESDFEVIGEAENGQQAIDLAAQLQPNIVLMDIELPI 63 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG + ++IK ++VL LS+ + + AGA+G+ K D + +++I Sbjct: 64 LDGISATQKIKATCPDIRVLALSAFGKDNQVVGMLAAGADGYCLKSIDWQQLLAVIRLIQ 123 Query: 122 SGYTFFPSETLNYIKS----------NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIA 171 G T+ + + + S ++ TVLS+RE +L+ + G SN+EIA Sbjct: 124 GGGTYLDPQIAHKLASMLKSANTPTTAPAHRQTAPATVLSDREREVLQLISEGCSNQEIA 183 Query: 172 DKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 ++L LS T+ ++ I KL + V+ A LI Sbjct: 184 NQLYLSLGTIKSYVRMILNKLSVDDRVQAAAKAVREGLI 222 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 98/211 (46%), Gaps = 2/211 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M+ ++++D H + R ++ LL+ + + + D + ++ D++++DI +P Sbjct: 1 MEKIRMVLIDDHKLFRDGMKKLLEMEPDFSLEGEASDGIEGLALIKRSRPDVVLLDIGMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 DG ++ ++ + K + +++ ++ G +GFV K + + ++ A++ + Sbjct: 61 NLDGIGLIRELRSTEQNTKFVAITAFNDERKLSELSSVGVHGFVLKSSGRTELLSAIRSV 120 Query: 121 LSGYTFFPSETLNYIKSNK--CSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 G + + + + + L++RE +L +L GLSN EI+ K+ LS Sbjct: 121 ARGQCYVDPKVAGLLLGAFHKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAKMNLSE 180 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 KTV H S+I KL L + A + Sbjct: 181 KTVKNHVSHILKKLDLRDRTQAAILAWRVGI 211 >UniRef50_A5URU4 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexi (class) RepID=A5URU4_ROSS1 Length = 242 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 53/222 (23%), Positives = 102/222 (45%), Gaps = 13/222 (5%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 + V+I+D HP+ R I L++ ++++V + ++ + I D++++DI+LPG Sbjct: 3 QRIRVLIIDDHPLFRQGIRWSLEEAGDMEVVGEAENGQEAIKLAERLVPDVVLVDINLPG 62 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +G + IK+ + + ++ +S + +AI+ GA + SK D+ ++ + Sbjct: 63 LNGLEVARVIKRREPRIGLIVISVYEDDDQLFQAIKVGAAAYSSKDVHPRDLVRMIREVA 122 Query: 122 SGYTFFP------SETLNYIKSNKC-------STNSSTVTVLSNREVTILRYLVSGLSNK 168 G + S+ L++RE+ IL + GLSNK Sbjct: 123 RGKYLINDSVIAKPHVATRVLHQFRELAATEDERTSALFAPLTSREIEILDCIARGLSNK 182 Query: 169 EIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 EIA +L +S +TV H ++I KL ++ + YA I Sbjct: 183 EIASQLSISGQTVKNHITSILSKLQVNDRTMAVIYAIQRGWI 224 >UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM Length = 206 Score = 262 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 2/207 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +I+ D H I R + LL + EL+IV + + +R D+ ++DI +PG + Sbjct: 2 IRIIMADDHTIFRQGLAHLLSAHQELEIVGEAGRGDDALQLIRDLNPDVALLDISMPGLN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +KR+ + + ++L L+ + A +A QAGA G+V K N +++ A+ + +G Sbjct: 62 GLDVVKRVVEEKRPTRLLLLTMHDDPTLAIKAEQAGALGYVVKDNAFSELLDAILAVAAG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 F + N+ LS RE ++R + G +NKEIA L +S KTV Sbjct: 122 KRFVSEVVAEKV--NELERLDDLPVQLSPREKEVVRLVADGQTNKEIARSLGISPKTVDT 179 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H++ + KL LH+ +++ YA L+ Sbjct: 180 HRTRLMRKLNLHTTADVVRYAMRMGLV 206 >UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9H4_DESAH Length = 217 Score = 262 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 109/212 (51%), Gaps = 4/212 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MK V+I D H ++R I +++ + +V + D ++ L T+P DL+I+DI +P Sbjct: 1 MKACRVVIADDHAMLRRGICQVIETQEGVSVVGEVGDGIELLNLLSTQPADLVILDISMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G K+I+ +K+LFLS Y A AGANG++ K + +I A+ I Sbjct: 61 KMSGIEAAKKIRATYPGIKILFLSMHKRNEYLYHAFSAGANGYLLKEDTDTEILTAMDTI 120 Query: 121 LSGYTFFPS----ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 L G F S + + + + +S LS RE +L L G SNK+IAD L + Sbjct: 121 LEGKAFLSSIFTKDMPDILTDMVKNGSSFPGGTLSPREEEVLTLLAEGKSNKKIADILCI 180 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYE 208 S +TV H+++I +L L ++ +LI YA + Sbjct: 181 STRTVEHHRASIMKRLDLRTLADLIKYAIRHG 212 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 56/205 (27%), Positives = 105/205 (51%), Gaps = 2/205 (0%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 + I+D HPI R + L + + IV + + + ++ + D+++MDI +P +G Sbjct: 2 RIFIVDDHPIFREGLIARLSMDDDFVIVGQAANGKEALEKMPNLMPDIVLMDISMPEMNG 61 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 + K +K+L LS + Y + G G+ K ++F+A+++I +G Sbjct: 62 MDAAEIFKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVIHNGG 121 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 ++ + + + + +TV L+ RE T+LR L SGL+NKE+A +L +S +T+ H Sbjct: 122 IYYSRAISDLLVQSSQEPDKNTV--LTTREQTVLRLLASGLNNKELARELDISVRTIETH 179 Query: 185 KSNIYGKLGLHSIVELIDYAKLYEL 209 + NI KL + + L+ YA + L Sbjct: 180 RRNIKDKLAIKTSAGLVRYAIDHGL 204 >UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WI37_BACSK Length = 210 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 50/209 (23%), Positives = 100/209 (47%), Gaps = 2/209 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V++ + ++R ++ +++ + ++++ + DD R + T D+ I+DI +P D Sbjct: 2 IKVLLAEDQVMVRQGLKAMIETDEDIKVTGEADDGRKALRLCETHVFDVAILDIRMPEMD 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G K ++ +K+L L++ + Y +++ G NG++ K D + +++ ++G Sbjct: 62 GIEAAKMMRLRYPKMKILMLTTFDDHQYVVESLKLGVNGYMLKNGDTESLIRSIKSTING 121 Query: 124 YTFFPSETLNYIKSNKCSTNSST--VTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + + L+ RE IL + GL+NKEIA++L LS TV Sbjct: 122 GLSLEDQVAAKVVPTLLQNQEEPSIDPSLTPRERAILTCIGEGLNNKEIAERLGLSVGTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S+I+ KL L +L YA + L+ Sbjct: 182 KNQTSHIFDKLALRDRTQLAIYAIRHRLV 210 >UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 Tax=Vibrio RepID=C9QDP7_VIBOR Length = 209 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 51/207 (24%), Positives = 97/207 (46%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +I+ D H +++ ++ L++ L I+ ++ D++++DI++P + Sbjct: 2 IRLILADDHRLMQDGLKSRLEREDNLDIIACVGTGTEALEATLELKPDVLLLDINMPNLN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G L+++ + S V+ LS Y R+++AGA G+V K ++ A+ + G Sbjct: 62 GIEVLEQLAKTSSATSVIMLSMHDSRDYVVRSVKAGAKGYVLKDVGSEELVMAINQVAQG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 ++ + + + LS RE +L+ + +G NKEIAD L +S +TV Sbjct: 122 RSYLCPQASDRLLEQINEAPEEKDDTLSKRESDVLKAIANGAGNKEIADSLHISVRTVET 181 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H+ I KLG S L+ A L+ Sbjct: 182 HRLRIKKKLGATSTAALVKLALQKGLV 208 >UniRef50_A3CKH3 Two-component system transcriptional regulator (CheY domain and HTH-like DNA-binding domain), putative n=30 Tax=Bacteria RepID=A3CKH3_STRSV Length = 227 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 9/215 (4%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I D +IR S++++L ++++++V D + ++ L D+I+MDI +P D Sbjct: 2 IKVLIADDQALIRESLQIILSAHADIEVVGTVGDGKEVLEKLHRVRPDVILMDIRMPVMD 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G K +K+ VK++ L++ + + A++ GA+G++ K ++ A+Q + G Sbjct: 62 GVLCTKAVKEQYPDVKIIILTTFDDDEFIFSALKYGASGYILKGVSTEELHEAIQTVYRG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTV---------TVLSNREVTILRYLVSGLSNKEIADKL 174 + S +S E I++ + G+SNKEIA KL Sbjct: 122 GAMINPNIATKVFKIFSQMAQSNFAITVTEENIEDMSRTEWKIIQQIGFGISNKEIAAKL 181 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 LS TV + S I KL L +L +A + Sbjct: 182 FLSEGTVRNYLSGILAKLNLRDRTQLAIWAVQTGV 216 >UniRef50_D1BCA8 Two component transcriptional regulator, LuxR family n=18 Tax=Bacteria RepID=D1BCA8_SANKS Length = 234 Score = 262 bits (671), Expect = 6e-69, Method: Composition-based stats. Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 4/208 (1%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 V++ D HP++R I +L S++++V + +D R +D RT D++I D+ +P Sbjct: 28 TVRVVVADDHPVVRAGIVGMLGVESDIEVVGEAEDGRQAVDLARTLSPDVVITDLRMPVL 87 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG + I + TV+V+ L++ RA++AGA G++ K + ++ ++ Sbjct: 88 DGVGATREIVALPGTVRVVVLTTYETDGEILRAVEAGATGYLLKDTPRAELVAGIREAAR 147 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G T + S S L+ REV +LR + GLSN + +L +S TV Sbjct: 148 GQTVLTPSVATRLVSQVGSRA----DRLTPREVEVLRAVARGLSNAAVGHELFISETTVK 203 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 H +GKLG++ + A L+ Sbjct: 204 THLIRAFGKLGVNDRTHAVTVATDRGLL 231 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 262 bits (671), Expect = 6e-69, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 4/207 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +P V++ D HPI+R ++ L +L +V + D + + D++++D+++PG Sbjct: 3 EPIRVLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNMPG 62 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 +DG L R+ KV+ L+S +E A+ AGA GF+ K D + + A++ + Sbjct: 63 SDGAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSVA 122 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 G F + + V L+ RE +L + +G SN+EIA +L ++ KTV Sbjct: 123 DGQVIF----AREAVTAMTAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEKTV 178 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYE 208 H S+++ KLG+ + YA + Sbjct: 179 KTHLSSLFRKLGVADRTQAALYAVTHG 205 >UniRef50_C6WV69 Two component transcriptional regulator, LuxR family n=2 Tax=Betaproteobacteria RepID=C6WV69_METML Length = 216 Score = 262 bits (671), Expect = 6e-69, Method: Composition-based stats. Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 1/209 (0%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 VII D H I+R ++ +L + ++ ++ + + I D++++DI LP Sbjct: 7 KIKVIIADDHAILRAGLKQILSETEDILVIAEAQNANEAIKLGSQPEADVLLLDISLPDR 66 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G LK IK+ S + VL LS E YA RA+++GA G++ K + +++ +A+Q + Sbjct: 67 SGMEALKYIKRENSHIAVLMLSMHREDEYAIRALKSGAAGYLCKQSASSELVNAIQTVAR 126 Query: 123 GYTFFPSETLNYIKSNKCSTN-SSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 G + E + + + + +LS+RE + SGLS ++A+KL LS KTV Sbjct: 127 GKKYITPEVAEILANQIGRDDQKAPHELLSDREYQTFIMIASGLSVTDVANKLSLSVKTV 186 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S +++ + K+ L EL YA + L+ Sbjct: 187 SMYRARLLEKMQLKHNAELTHYAFKHNLV 215 >UniRef50_D1BGN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=4 Tax=Actinomycetales RepID=D1BGN7_SANKS Length = 258 Score = 262 bits (671), Expect = 6e-69, Method: Composition-based stats. Identities = 49/216 (22%), Positives = 98/216 (45%), Gaps = 9/216 (4%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D + R I V++ L++V + D + + D+++MD+ +P D Sbjct: 34 IRVLLVDDQELFRSGIAVIVDAQDGLEVVGQAADGSEAVRMVDDLSPDVVLMDVRMPELD 93 Query: 64 GFTFLKRI------KQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAV 117 G ++I V+V+ L++ A AI+ GA+GF+ K + A+ Sbjct: 94 GVEATRQIFAPARAASRAGPVRVIVLTTFDLDDRAAAAIRYGASGFLLKDATPAMLRDAI 153 Query: 118 QMILSGYTFFPSETLNYIKS---NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKL 174 + + +G + L+ + + + L+ +E +L + +GL+N EIA + Sbjct: 154 RTVHAGNAVLAPDDLSTLLDGRFRARRPSPPGLEDLTPKEREVLAAVAAGLNNAEIARRA 213 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +S TV H + KLGL V+++ A + L+ Sbjct: 214 FVSESTVKTHVGAVLRKLGLRDRVQVVVLAHEHGLV 249 >UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q98DH9_RHILO Length = 215 Score = 261 bits (670), Expect = 8e-69, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 105/207 (50%), Gaps = 1/207 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++I D HPI+R I +L++ +E + + D+ + R ++I+D LP + Sbjct: 6 IKIVIADDHPIVRSGIRAVLEQRAEWWVCGEADNGETAVRLAREHAAKIVILDYSLPVLN 65 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + I++ +VL + + ++AGA G++ K D +++ AV ++ G Sbjct: 66 GLEATRIIRRTMPETEVLIYTMHEDESLIRETLRAGARGYLLKIEDDSELVAAVAALIRG 125 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTV-LSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 T+F + + S + L+NRE ++R++ G SNK IA +L +S KTV Sbjct: 126 QTYFSPRVSECVLQDFLDGQSDVTSRNLTNREREVVRFVSEGESNKRIAARLGVSVKTVD 185 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYEL 209 +H++ KLGL + V+L+ YA +L Sbjct: 186 SHRTTAMRKLGLRNAVDLVRYAIRNKL 212 >UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderiaceae RepID=Q1LE49_RALME Length = 264 Score = 261 bits (670), Expect = 8e-69, Method: Composition-based stats. Identities = 54/210 (25%), Positives = 108/210 (51%), Gaps = 5/210 (2%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 V+I++ H ++R + +L + + D R + DLI+MD+ LPG +G Sbjct: 7 VLIVEDHNLLRAGLRSMLSAQMGYHVAGEARDGREACQLAISLCPDLILMDLSLPGMNGI 66 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 + IK+ ++++ LS Y A++AG +G+V K +D+ A++++L G Sbjct: 67 DAIAAIKRRSPGIRIIALSVHQNDEYVREALRAGVDGYVLKDTSFDDLVTAMRVVLLGKK 126 Query: 126 FFPSE-----TLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 E +Y+ ++ ST + +L+ RE ++L+ + G SN+++ + LS KT Sbjct: 127 HLSPELYGNLVESYVSGHEMSTAKTGWDLLTARERSVLKLVAEGRSNRQVGIYMNLSPKT 186 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 + +++++ KLG+ ++ EL+ A LI Sbjct: 187 IEKYRASLMRKLGITNLTELVLIAISMGLI 216 >UniRef50_B4D831 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4D831_9BACT Length = 209 Score = 261 bits (670), Expect = 9e-69, Method: Composition-based stats. Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 6/209 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 + V+I+D H ++R+ + + +L +V + + ++ R D++ MD LPG Sbjct: 3 RKIRVLIVDDHAMMRLGLVEAIAGERDLTLVGEAANGTQCLEQYRKHQPDVVTMDFRLPG 62 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG ++ +V+ LS RA++AGA G+VSK + ++ A++ ++ Sbjct: 63 ADGAESTAHLRTEFPDARVVVLSVFEGEEDIWRAVEAGAMGYVSKSAEVEEVLEAIRCVV 122 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 G T+FP+ + + S + L+ RE +L ++V+GLSNKEIA L +S TV Sbjct: 123 GGETYFPAPIASKLASRRTR------DALTPREHQVLHHIVAGLSNKEIAAALHMSEATV 176 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 H SN KL + + A +I Sbjct: 177 KLHISNTLAKLHVADRTQAAIVAVQRGII 205 >UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrhizobium RepID=Q89IF1_BRAJA Length = 217 Score = 261 bits (670), Expect = 9e-69, Method: Composition-based stats. Identities = 53/206 (25%), Positives = 99/206 (48%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 SV+++D HPI+R +L+ +L +V + D+ + D++++DI +PG Sbjct: 9 ISVLLVDDHPIVRQGYRRVLESQGDLHVVAEADNAADAYGAFKAHDPDVVVLDISMPGAS 68 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++ I+ ++L + +E A AGA+GFV+K ++ + + +A++ + G Sbjct: 69 GLEAIRNIRARSPRARILVFTMHNEAVLVKAAFSAGASGFVTKSSEPSAVVNAIRSVARG 128 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + + + + S S + L RE+ ILR G + ++IA L LS KTV Sbjct: 129 ERAMSDDIAHILADDSLSPTGSVLDQLGEREIEILRQFAGGATTEQIATHLNLSVKTVQN 188 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYEL 209 + I K G + +L+ A L Sbjct: 189 YHYLIKTKTGARTDAQLVRLAASCGL 214 >UniRef50_UPI0001789C57 two component transcriptional regulator, LuxR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C57 Length = 225 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 11/220 (5%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K +++ D P IR + +L ++Q++ + +D D+++MDI +PG Sbjct: 5 KMIRIVLADDQPFIRKGLRYILDIQKDMQVIGEAMTGEEAVDITLRNVPDIVLMDIRMPG 64 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G K I + KV+ L++ Y I+AGA+G++ K + +++ ++ + Sbjct: 65 GTGIMATKSIAEALPNTKVVLLTTFDVEQYVFDGIRAGASGYLLKDTETDELLSGIRAMH 124 Query: 122 SGYTFFPSETLNYIKSN-----------KCSTNSSTVTVLSNREVTILRYLVSGLSNKEI 170 G T F S T + L+ RE +L+ L G N EI Sbjct: 125 RGATLFNSSTAKRALDQILTSGMQEPDSDSPGKDRLLGALTERETEVLQLLAYGKRNHEI 184 Query: 171 ADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 + L +S T H +I KLG + + A +L+ Sbjct: 185 SAILCISEGTTKTHIHHIMQKLGALDRTQAVVTAIRMKLV 224 >UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z3_LEPCP Length = 235 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 115/205 (56%), Gaps = 1/205 (0%) Query: 6 VIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGF 65 ++I+D H I+R ++ +L+ +V + ++ +R +P+DL I+D+ +PG +G Sbjct: 15 ILIVDDHVIVREGLQRILEATGAGWVVAEASSGFQALEVMRHQPIDLAIVDLSMPGMNGL 74 Query: 66 TFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYT 125 +KRI+ V+VL LS +E YA RA +AGANG+V+K ++ +AV+ + +G Sbjct: 75 DLIKRIRTEFPRVRVLVLSMHAEEQYAMRAFKAGANGYVTKDGASAELVNAVRKVATGGA 134 Query: 126 FFPSETLNYIKSNK-CSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 + + + +T + LS+RE+ +LR +V+G +IA+ L LS KTVS H Sbjct: 135 YVTASLAERVVLQLNGATTAPGHAQLSDRELEVLRRIVAGERITDIAEALHLSVKTVSTH 194 Query: 185 KSNIYGKLGLHSIVELIDYAKLYEL 209 KS I KL L ++ LI Y + L Sbjct: 195 KSRIQEKLQLPTMAALIRYGMAHGL 219 >UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobacteria RepID=GACA_PSEU2 Length = 214 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 105/209 (50%), Gaps = 2/209 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D H ++R I +L LQ+V + D ++ R D+++MD+ +PG Sbjct: 2 IKVLVVDDHDLVRTGITRMLADIDGLQVVGQADSGEESLKKARELKPDVVLMDVKMPGIG 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +++ + +KV+ ++ E + R +QAGA G+++K ++ A++++ +G Sbjct: 62 GLEATRKMLRSHPDIKVVAVTVCEEDPFPTRLLQAGAAGYMTKGAGLAEMVQAIRLVFAG 121 Query: 124 YTFFPSETLNYIKSNKCSTN--SSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 + + + +S +LS RE+ I +V + I+DKL LS KTV Sbjct: 122 QRYISPQIAQQLALKSFQPQVNNSPFDLLSEREIQIALMIVGCQKVQTISDKLCLSPKTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 + ++ I+ KL + S VEL A + ++ Sbjct: 182 NTYRYRIFEKLSISSDVELALLAVRHGMV 210 >UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746AEC Length = 222 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 4/210 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 V+++D H ++ +L +L++ + L DL++ D+ L G Sbjct: 8 SKARVLLVDDHRMVLEGYRFMLNAQPDLEVCATAVSAAEALGLLEQVRPDLVVTDLTLGG 67 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G +K + + K+L S E +A R +QAGA G+V K D AV+ +L Sbjct: 68 RSGLDLIKDVMALFPETKILVCSMHDEMLWANRTLQAGARGYVMKDADGPTFLTAVRTVL 127 Query: 122 SGYTFFPSETLNYIK----SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 +G + S + +K +SS + LS+RE + R G + KEIA +L LS Sbjct: 128 AGQRYMSSRLAASVLESFGQSKPRGSSSPIEKLSDREFEVFRLFGEGKTAKEIAAQLNLS 187 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLY 207 KTVS H+ +I KLG + E+I A + Sbjct: 188 PKTVSVHRDHIKEKLGFSTSAEMIRQAVRH 217 >UniRef50_A1WT06 Two component transcriptional regulator, LuxR family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WT06_HALHL Length = 216 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 57/208 (27%), Positives = 108/208 (51%), Gaps = 1/208 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V++ D H +IR +I+ +L+ ++QIV ++ + +R + D+++MD+ +PG Sbjct: 2 IRVVLADDHRLIRQAIDGMLRDIPDIQIVAHAENAEHAVAAVREQEPDVVLMDLQMPGMG 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++R+ + V V+ L+ Y A++AGA G+V K D++++ A++ + G Sbjct: 62 GVEAIRRLYRSHPKVGVIALTVYQSGPYPAHALRAGAKGYVHKGADRDELIEAIRSVYLG 121 Query: 124 YTFFPSETLNYIKSNKCST-NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + E ++ N S L+ RE +L +++G IA L LS KTVS Sbjct: 122 RRYICHEVARHVALNSLDGTGESPFDHLTPREFEVLMRILNGQRGTSIAKDLCLSPKTVS 181 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 ++S I+ +LG+ + +L A Y L+ Sbjct: 182 TYRSRIFERLGVRNDAQLTRIAIDYGLL 209 >UniRef50_A0NNP3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNP3_9RHOB Length = 205 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 52/204 (25%), Positives = 100/204 (49%) Query: 7 IIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFT 66 ++ D H ++R I LQK ++L++V + + R + D+++MD+ +P +G Sbjct: 1 MLADDHELVRDGIRARLQKVADLEVVGEATNGREALTLAHDLRPDVLLMDVSMPVMNGLE 60 Query: 67 FLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTF 126 +++++ + VL LS Y +QAGA G++ K ++ A+ + SG + Sbjct: 61 AATQMRKLLPEIAVLILSVYDNPEYVRGVVQAGARGYILKDISAAEMITAITSVASGGYY 120 Query: 127 FPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHKS 186 F S + S L++RE +L + G NKE+A +L +S +TV +H+ Sbjct: 121 FSSAVGPTLVGAGTSAPVEDPYGLTDRERQVLTAIARGQPNKEVAKELGISVRTVESHRL 180 Query: 187 NIYGKLGLHSIVELIDYAKLYELI 210 N+ K+G + +L A+ L+ Sbjct: 181 NLREKVGNKNAAQLYKVAQDLGLL 204 >UniRef50_C7NKN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=138 Tax=Bacteria RepID=C7NKN7_KYTSD Length = 244 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 51/221 (23%), Positives = 96/221 (43%), Gaps = 19/221 (8%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 + ++D ++R ++L ++ +V + D + +D L+T D+++MDI +P DG Sbjct: 4 RIFLVDDQSLVRAGFRMVLDAQPDMSVVGEAPDGQSAVDQLKTIAADVVLMDIRMPRLDG 63 Query: 65 FTFLKRI--KQIQS---TVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 + + + KV+ L++ YA A++AGA+GF+ K ++ A++ Sbjct: 64 IEATRVLLGRDKHPGGAEPKVVVLTTFDMDEYAYAALEAGASGFLLKDAGPEELLAAIRA 123 Query: 120 ILSGYTFFPSETLNYIKSN--------------KCSTNSSTVTVLSNREVTILRYLVSGL 165 + SG T + VL+ RE + + +GL Sbjct: 124 VASGDAVVAPSTTKRLLERFVPTLTPEVADVASPAEQQEYLREVLTEREYEVFEAVAAGL 183 Query: 166 SNKEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKL 206 SN EIA +L ++ T+ H + KLG V+L+ A Sbjct: 184 SNTEIAKELFVAEATIKTHIGRLLFKLGCRDRVQLVITAYE 224 >UniRef50_UPI0001C314AF two component transcriptional regulator, LuxR family n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AF Length = 228 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 104/207 (50%), Gaps = 2/207 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I D H ++R + ++L ++ +V + D +R ++++D+++PG Sbjct: 14 IRVVIADDHRVVRSGLRMVLDAEPDIAVVAEAGDVPSAERAVRAHHPHVLVLDLNMPGEQ 73 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 + R+ V+ L+ + + +A A+++GA G+V K +++ AV++ G Sbjct: 74 SLPAIPRLVAELPETAVVVLTMQQDPAFAREALRSGARGYVLKEAADDELVQAVRLAREG 133 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 T+ E + + S L+ RE+ +LR + G +N EIA +L LS +TV + Sbjct: 134 RTYLNPELGARMAAEP--PPSGPPDDLTARELEVLRLIALGHTNAEIAQQLFLSIRTVES 191 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H+++I K+ S EL+ YA + L+ Sbjct: 192 HRAHIQQKVRRSSRAELVRYALDHGLM 218 >UniRef50_A8L3K7 Two component transcriptional regulator, LuxR family n=16 Tax=Actinomycetales RepID=A8L3K7_FRASN Length = 244 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 2/205 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M+ V ++D H I+R + L ++ ++++V + + + + ++D LP Sbjct: 33 MEKIRVFVLDDHEIVRNGLRQTLARHDDIEVVGEAGLAAEALRRIPALHPHVAVLDGRLP 92 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G + ++ V L L+S + AI AGA G+V K ND+ A++ + Sbjct: 93 DGSGIDVCREVRSALPDVACLILTSYDDDEALFSAIMAGAAGYVLKEIRGNDLVGAIRTV 152 Query: 121 LSGYTFFPSETLNYIKSNKCST--NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 SG + + + L+ RE IL+ + GL+N++I +L LS Sbjct: 153 ASGQSLLAPSVTRRVLERLRDGPSEDPAMATLNQREREILQLIADGLTNRQIGTRLGLSE 212 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDY 203 KTV + S+I KLGL S + Y Sbjct: 213 KTVKNYVSSILEKLGLASRTQAAVY 237 >UniRef50_B4D2I0 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2I0_9BACT Length = 209 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 49/209 (23%), Positives = 97/209 (46%), Gaps = 6/209 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +P +++ D H ++RM + L+ + +IV + D + I + + D+ ++D LP Sbjct: 4 RPIRLMLADDHFMVRMGLATSLKLEPDFEIVAEADTGKEAISFYQHHRPDVALLDCRLPD 63 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G + ++ +T ++L LS+ + RA+QAGA ++ K + +I A++ + Sbjct: 64 MTGIEVTQALRAADATARILILSAFNGEEDVFRAVQAGAESYLLKNARRTEIVTAIRTVH 123 Query: 122 SGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 +G +FP E + + L+ RE ++L +V G SNKEI L ++ V Sbjct: 124 AGSPYFPPEISAILAARMRR------EELTPREKSVLFEIVKGSSNKEIGCCLEITESAV 177 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 H +++ KL A ++ Sbjct: 178 KIHVTHLLQKLNAKDRTHAATIAIQRGIV 206 >UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 Tax=Bacillales RepID=C0Z7M8_BREBN Length = 602 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 56/220 (25%), Positives = 108/220 (49%), Gaps = 13/220 (5%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++I+D H IR S+ +L+ +L++V +D ++ DL++MD+++P D Sbjct: 383 IRLVIVDDHSFIRESLRSILEGQRDLRVVGLAEDGAQAVELCEELEPDLVLMDLEMPNMD 442 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G T KRIK+ +++L LS+ + A +++GA+G++ K + ++ ++++ G Sbjct: 443 GITATKRIKEKWPGIRILVLSTFQDTEKAKEIMRSGADGYLLKSIESRELAETIRLVHRG 502 Query: 124 YTFFPSETLNYIKSNKC-------------STNSSTVTVLSNREVTILRYLVSGLSNKEI 170 T + + + + S L+ RE IL+ L G+ K I Sbjct: 503 GTMIAQDLFHKMLDGQPVNGQEDLLVAPKQSEKDENAYGLTKREQEILQMLAQGMRYKTI 562 Query: 171 ADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 A KL LS+ TV + S +Y KLG+ + + + K+ L+ Sbjct: 563 ASKLYLSDGTVRNYASALYDKLGVRNRDDAVQKGKMEGLV 602 >UniRef50_A4FAA4 Two component system response regulator n=2 Tax=Actinomycetales RepID=A4FAA4_SACEN Length = 218 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 7/213 (3%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 T +++ + I+R + +L+ +L ++ + D + +R D+++MDI +P D Sbjct: 2 TRILLAEDEQIVRAGLRKILESAGDLTVIAEAGDGAEAVTGVRRHAPDVVVMDIQMPRLD 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G ++I + + K+L L+ AI+AGA+GF+ K ++ +A+++I G Sbjct: 62 GLAATRQITSLPAPPKILILTMFDFDANVYSAIEAGASGFLLKDARPEELINAIRVIADG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSST-------VTVLSNREVTILRYLVSGLSNKEIADKLLL 176 + S+ NS + L+ RE IL + GLSN IA L Sbjct: 122 DAMLSPSVTRRLLSHFADRNSPRGPTAVRGLDELTPRERQILSLVGGGLSNASIAKTLGA 181 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 + TV H S + KL + V+L A + Sbjct: 182 TESTVKGHVSRLLMKLDCENRVQLALIAHNAGI 214 >UniRef50_Q47DK2 Two component transcriptional regulator, LuxR family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47DK2_DECAR Length = 211 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 60/210 (28%), Positives = 104/210 (49%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 MK T +I+ D +IR I +++ QI + D I ++ D++++DI +P Sbjct: 1 MKKTRIILADDQLLIRAGIRAIVETLPGFQIEAECTDGYEAISAIQRLQPDVVLLDIAMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G G + I+Q K+L LSS +A+ AG NG++ K ++ A++M+ Sbjct: 61 GPSGIEVARTIRQFDPNTKILVLSSVDRPEIIEQALAAGVNGYLLKDFVLAELLQALEMV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 L G F + + + S + T L+ R+ ILR + SG + KEIA L +S KT Sbjct: 121 LHGERFLSPKIREMSRFSDAEGTSGSGTQLTARQTEILRLVASGRTTKEIARDLGISPKT 180 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V H+S + ++G+H + L +A ++ Sbjct: 181 VEFHRSRLMERIGVHDVTGLTRFALQTGVV 210 >UniRef50_A5WFD3 Two component transcriptional regulator, LuxR family n=3 Tax=Psychrobacter RepID=A5WFD3_PSYWF Length = 211 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 57/208 (27%), Positives = 111/208 (53%), Gaps = 1/208 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D H ++RM I +L + E++++ + D I ++ D++++D+++P Sbjct: 2 IKVLVVDDHDLVRMGISRMLADDPEIEVIGEADSGEAAIRMVKALSPDVVLLDVNMPNIG 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G KR++Q VK+L +SS S Y ++AG NG+++K +++ A++ + G Sbjct: 62 GVETTKRLRQFDEKVKILAVSSVSSQPYPSMLLKAGVNGYITKGTPLDEMIKAIKKVYQG 121 Query: 124 YTFFPSETLNYIKSN-KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 +F S+ + S LS RE + +V+ S ++IAD+L +S KTV+ Sbjct: 122 SKYFSSDVAEQLADMLLTDNEESPFDRLSEREKQVAMMVVNCQSPQQIADQLFVSVKTVN 181 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 ++ I+ K+G+ S V+L A + LI Sbjct: 182 TYRYRIFEKVGVDSDVKLTHLAMRHGLI 209 >UniRef50_B6A2W0 Two component transcriptional regulator, LuxR family n=47 Tax=Proteobacteria RepID=B6A2W0_RHILW Length = 223 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 102/207 (49%), Gaps = 3/207 (1%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 V+++D HP++ ++ +L+ +++ + +D R +++MDI++P Sbjct: 6 KIRVLLIDNHPLVLDGLKAVLETFDHIEVAGTAGLAQTGLDIARQIQPQVVLMDINMPKL 65 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G ++ + ++V+ LS Y ++ GA G+V K ++I A++ + Sbjct: 66 SGIDAIELFRNEFPEIRVVMLSMHDSREYISSSVMHGAAGYVLKDVSTDEIVAAIETVAD 125 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G T+F S + + + S L+ RE IL +V+G SN+EIA+ L +S+ T Sbjct: 126 GGTYFSSGVFDALMGERAEEGSDP---LTPREHDILGLIVAGRSNREIAEVLGISSATAE 182 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYEL 209 H+ N+ KLG+ + LI YA + + Sbjct: 183 THRKNLKKKLGIATTAGLIRYALDHGI 209 >UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0L7_PELTS Length = 223 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 52/212 (24%), Positives = 106/212 (50%), Gaps = 6/212 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++++D P++R S+ +L + + ++ +V + + + + +I+MD+++P D Sbjct: 9 IQLLLVDDDPLVRRSLRMLFELH-DINVVGEASNGEEALKAIARLKPTMILMDVNMPKMD 67 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G LK IK ++V+ L+ ++ +AI+ G + +V K + + V+ + G Sbjct: 68 GIQALKAIKTNYPDIQVIILTVHNQHEKVVQAIRDGCSAYVLKDSPPEQLIEVVESVAEG 127 Query: 124 YTFFPSETLNYIK-----SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 F + N + + + +L+ RE +L+ +V+GLSNKEIA KL ++ Sbjct: 128 RYFVDTSIANELLVNLVQGTPRRQHPKNLPLLTLREKEVLQLIVNGLSNKEIAGKLNITL 187 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +TV AH S+I KL ++ + A L+ Sbjct: 188 RTVKAHVSSILMKLNVNDRTQAAVLAIQENLV 219 >UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C48EF Length = 220 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 55/210 (26%), Positives = 103/210 (49%), Gaps = 3/210 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M T +++ D H I+R + L+ +L++V + T+D +R ++ +D+ +P Sbjct: 1 MPRTRIVLADDHVILREGLRALISAQPDLEVVGEAASGTETVDCVRATEPRVLCLDLSMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G T + R+ Q+ +VL L+ ++ Y A+ AGA G+ K D+ A++ + Sbjct: 61 GWGSATTITRVTQLAPRTRVLVLTMHNDPAYVRSALAAGAAGYFLKTTPSPDLLAAIRAV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 +G + + + + LS RE +L LV GL+++EIAD+L LS KT Sbjct: 121 ATGARVIDPALGDVL---GGPPPPAERSQLSRRETEVLELLVKGLTHQEIADQLFLSVKT 177 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V +++ + K GL + + + Y L+ Sbjct: 178 VETYRARLREKTGLKTRADYVRYGLEAGLL 207 >UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, putative n=2 Tax=Shewanella RepID=B8CN77_SHEPW Length = 206 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 113/206 (54%), Gaps = 3/206 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D HP+ R + L +S+++++ + D+ + ++ L PVDL++ DI++P D Sbjct: 2 IRVLLVDDHPLFREGLRYRLSLDSDIEVLAEADNGQQALEILNKMPVDLVLTDINMPQMD 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G L+ IK+ + + KV+ LS Y ++ GA+G++ K ++ A++ + +G Sbjct: 62 GMYLLELIKEQELSCKVVMLSMHDNKEYIMATMRYGADGYILKDVPGKELIEAIKKVAAG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 +F ++ +N + S + V + RE +LR + G++NK IA ++ +S +TV Sbjct: 122 KRYFSADVINTLSQELASGKQALV---TQREQLVLRLISLGMNNKRIAQEMDVSVRTVET 178 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYEL 209 HK NI KL + S L+ YA + L Sbjct: 179 HKRNIKQKLMIDSTAGLVRYAIDHGL 204 >UniRef50_Q024A4 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q024A4_SOLUE Length = 225 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 51/207 (24%), Positives = 98/207 (47%), Gaps = 6/207 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I D HP++ + + ++ ++ +V + + R D+I+MD+ +PG Sbjct: 23 IRVLIADDHPVVCLGLLGIINGQPDMTVVGQAKTGTEAVALARKHSPDVILMDLRMPGMS 82 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + I+ + V+ L++ +A+ AGA ++ K + A++ + +G Sbjct: 83 GVEATEVIRAERPESAVIVLTTYQGDEDIRKALAAGAQSYLLKGMSHLKLLEAIRSVRTG 142 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 +T+FP N + LS RE+ ILR +V GLSN+EIAD L ++ TV Sbjct: 143 HTYFPRAIRNSVPGKLNR------AALSPREMDILRLIVRGLSNQEIADALNITRGTVKW 196 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYELI 210 H + I +L ++ + + A ++ Sbjct: 197 HVNIILRRLDVNDRTQAVVVAVQRGIV 223 >UniRef50_C7QC31 Two component transcriptional regulator, LuxR family n=95 Tax=Actinobacteria (class) RepID=C7QC31_CATAD Length = 236 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 9/217 (4%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 +PT V++ D ++R + +++ + L +V + + R D+++MDI +PG Sbjct: 12 EPTRVVLADDQDLVRAGLRLMIDRAPGLAVVGEAATGHDAVRIAREARADVVLMDIRMPG 71 Query: 62 TDGFTFLKRIKQIQS--TVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 DG +RI S V+VL L++ Y A+++GA+GF+ K + + A++ Sbjct: 72 LDGLAATRRIAADDSLAGVRVLILTTFEVDDYVFEALRSGASGFLGKGARPDALIDAIRT 131 Query: 120 ILSGYTFFPSETLNYIKSNKCS-------TNSSTVTVLSNREVTILRYLVSGLSNKEIAD 172 + G + + S S +T L++RE + + G+SN +IA Sbjct: 132 VARGDALLSPSATRGLIARFLSLQDTEPVHPSPLLTTLTDRERELTALVADGMSNTDIAR 191 Query: 173 KLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 +L LS TV H ++ KLG +L+ A L Sbjct: 192 QLTLSPLTVKTHVNHAMTKLGARDRAQLVVLAYQTGL 228 >UniRef50_Q027R2 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027R2_SOLUE Length = 247 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 55/222 (24%), Positives = 107/222 (48%), Gaps = 15/222 (6%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 +++ D HPI R + LL + ++V + D R +D L+ D++++D+ +PG Sbjct: 22 KIRIVVADDHPIFRDGLCRLLALEEDFEVVAQAQDGRQVLDVLQQHEPDILLLDLKMPGL 81 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG L+R++ ++ +V+ L++ + +A++ G +G V K + +++ + + Sbjct: 82 DGLATLQRLQIAKNKTRVIVLTASDDKNEFVQAMKLGTSGIVLKQTATELLIKSIRKVHA 141 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTV---------------TVLSNREVTILRYLVSGLSN 167 G + S T + + + + + LS RE I+ + G N Sbjct: 142 GEIWLDSHTTAAVIRQFVANDETPAMAAPSQAPPTRERERSPLSQREREIVALVAQGFKN 201 Query: 168 KEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 KE+A+K+ +S +TV H NI+ KLG+ +EL YA L Sbjct: 202 KEMAEKMFISEQTVKNHLHNIFDKLGVSDRLELALYAIHNNL 243 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 5/210 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M VI+ D HP+ R ++ L++ + +V + D + D+ ++DI +P Sbjct: 1 MSKIRVILADDHPLTRQGLKAYLEREENVALVGEAADGDEAWKLIEELKPDVALLDIRMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G DG T +RIK+ + V + L+S Y +++AGA GFV K + A+Q + Sbjct: 61 GADGITLARRIKENKLPVAAIMLTSYDSQQYVLASLKAGAKGFVLKTTSAGALMKAIQTV 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 +G F SE + + LS RE +L GLS+KE+A +L +S +T Sbjct: 121 ATGSLFLDSEVASVV-----GAQEELTEALSPREREVLLCAARGLSSKEVAAQLYISERT 175 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V H +++Y KLG H+ E + A + L+ Sbjct: 176 VQTHLASVYDKLGAHNKTEAMLLALKHGLM 205 >UniRef50_B4D808 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D808_9BACT Length = 212 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 9/213 (4%) Query: 1 MKP---TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDI 57 M P ++++D H ++R + +LL + + +V + DD + + R D+ +MD+ Sbjct: 1 MTPRNSIRLLLVDDHFVVRSGLAMLLAQQDDFAVVAEADDAEQAVAHYRQHRPDVTLMDV 60 Query: 58 DLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAV 117 +PG G L+RI+ +V+ L++ RA++AGA G++ K ++F AV Sbjct: 61 RMPGASGIEALQRIRGEFPDARVIMLTTYDLDEDVFRALEAGAVGYLLKSVRHAELFAAV 120 Query: 118 QMILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 + + +G P N + + LS REV L L G SN+EI L ++ Sbjct: 121 RKVHAGERCVPQSL------ETRCKNGALRSRLSPREVETLDLLARGFSNREIGSALGVT 174 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 +T AH I KL E +D A L+ Sbjct: 175 ERTAKAHVQAILVKLEAADRAEAVDAAYKRGLL 207 >UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22 Tax=Bacteria RepID=B1L0K3_CLOBM Length = 217 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 55/216 (25%), Positives = 111/216 (51%), Gaps = 6/216 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M T++I++D +IR ++++L +++++V D R + + + V +++MDI +P Sbjct: 1 MNKTNIIVVDDEKLIREGLKIILSTYNDIEVVGLAGDGREALSLCKEKDVQVVLMDIRMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 DG + IK+ +K+L L++ ++ Y A++ GA+G++ K + I+ ++ Sbjct: 61 NCDGVLGTRIIKEQFPHIKILILTTFNDKEYIHEALKFGASGYLLKDSSNELIYEGIKAC 120 Query: 121 LSGYTFFPSETLNYIK------SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKL 174 + G + N I + + L+ RE+ I+R + +GLSNKEIA+K+ Sbjct: 121 VKGNVVVHPDVANNIILNTTYEKELNDDDINLKYNLTEREINIIRQIANGLSNKEIAEKI 180 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 LS T+ + S I KL L ++ +A ++ Sbjct: 181 YLSEGTIKNNISTILSKLDLRDRTQIAIFAFKNNIV 216 >UniRef50_B4D2X8 Two component transcriptional regulator, LuxR family n=2 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2X8_9BACT Length = 242 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 4/207 (1%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 V+++D HP IR + ++ + +L + + ++ +R D+ ++DI +PGT+G Sbjct: 24 RVLLVDDHPAIRRGMAAIIDEEPDLTTCGEASTAPMALEAMRRLNPDIAVIDISMPGTNG 83 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 +K + Q +++L LS E YA RA++AGA G+V K + ++ + G Sbjct: 84 VELIKLMLAEQPGLQILMLSMHDESVYALRALRAGAKGYVMKGEALECVLTGLRKVGEGE 143 Query: 125 TFFPSETLNYI----KSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 + + + + + + +S V LS+RE +LR L G ++EIA++L LS KT Sbjct: 144 IYVSPKFSDRLIFKTIQSTIAGVASPVDKLSDREFEVLRLLGRGFGSREIAEELSLSVKT 203 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLY 207 V H+++I KLG E++ +A + Sbjct: 204 VETHRAHIKEKLGFKEAGEMVRFAIDW 230 >UniRef50_Q47FR0 Two component transcriptional regulator, LuxR family n=9 Tax=Betaproteobacteria RepID=Q47FR0_DECAR Length = 218 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 58/209 (27%), Positives = 105/209 (50%), Gaps = 2/209 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +I D H I+R+ ++ +L ++ + + + + LR D +++D+ +PG + Sbjct: 2 IRTLIADDHDILRIGLKHILSDTGDIVVTAEASNGIEALVELRKGTFDALVLDLTMPGRN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +K+IK + +L LS E YA R+++AGA+G++ K + + + A++ + G Sbjct: 62 GIELIKQIKGEFPKLPILILSMHKEDIYAVRSLKAGASGYLCKDSAETLLADAIRKVADG 121 Query: 124 YTFFPSETLNYIKSNK--CSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 F + + T L++RE I ++ GL EI +L LS KTV Sbjct: 122 GLFINQAVAEKLTLQILHGRDTDAPHTGLTDREHQIFLMILQGLGVTEIGRQLNLSVKTV 181 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S HK++I K+ L + EL+ YA + LI Sbjct: 182 STHKASILAKMNLRNSAELVRYAIQHRLI 210 >UniRef50_A6BYP5 Response regulator receiver domain protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BYP5_9PLAN Length = 221 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 4/212 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 + T V+I+D HPI+R L++ +LQ+ + D I + P DLII+DI L Sbjct: 7 QKTKVMIVDDHPIVREGYSRLIEHQDDLQVCGEADSKVDAIRKIMENPPDLIIVDISLKD 66 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G +K +K S +K+L +S E +A R+++AGA G+V+K + A+ +L Sbjct: 67 GSGLELIKDVKAQFSQIKMLTVSMHDETLFAERSLRAGALGYVNKQQAPEQLIKAIYQVL 126 Query: 122 SGYTFFPSETLNYIKSNKCS----TNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 G + + + ++ S + LS+RE+ + + G + + IA KL LS Sbjct: 127 KGKVYLSAAVTERMICRSIGSDNYSDQSPIESLSDRELEVFEQIGEGETTRSIAQKLNLS 186 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 +KTV ++ NI KL L + L +A + L Sbjct: 187 SKTVETYRENIKHKLNLENATALTRHAIQWVL 218 >UniRef50_C4XMF2 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMF2_DESMR Length = 218 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 53/217 (24%), Positives = 107/217 (49%), Gaps = 7/217 (3%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M ++I+D HP+ R ++ +L+++ + + Y + + DL ++DI LP Sbjct: 1 MPSKRLLIVDDHPLFREGLKAILRRDPSYAVAGEAGSYAEALRTAKDCRPDLAVLDISLP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G + ++Q+ ++ +L +S ++ Y A++ GA G+++K +++ ++ + Sbjct: 61 DRSGIQLARELRQMLPSLGILMVSMHAKVDYVAEALKVGALGYLTKDAATDNLLSGLRAV 120 Query: 121 LSGYTFFPS----ETLNYIKSNKCSTNSSTV---TVLSNREVTILRYLVSGLSNKEIADK 173 +G + E + + + L+ RE ++R +V GLSNKE+A Sbjct: 121 AAGQPWLDPTLSVEISRSLLAKTPRAEEESHSAYDSLTPREREVMRLVVEGLSNKEVAAA 180 Query: 174 LLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 L +S KT H+ ++ KLG+ + VEL+ YA LI Sbjct: 181 LEISVKTAEHHRGSLMRKLGMQNSVELVRYATKLGLI 217 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 1/206 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++++D HP+ R + LL + +IV + D + R DL+++D+++P + Sbjct: 6 IRILLVDDHPLFRRGLSFLLAQEYGFEIVAEATDGLEGVKLARFHRPDLVLLDVEMPVMN 65 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G L ++ Q + VL L+ + + ++ GA G++ K D + + A++ ++G Sbjct: 66 GPEALAQMLDFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAIRQAVAG 125 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 E N + +S+ + L+ RE +LRY+ G+SNK IA ++ LS TV A Sbjct: 126 QQTVSPEMNNA-GQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFLSENTVKA 184 Query: 184 HKSNIYGKLGLHSIVELIDYAKLYEL 209 H NI+ KL + + V YA+ L Sbjct: 185 HMQNIFRKLNIDNRVRAAVYARELGL 210 >UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paenibacillaceae RepID=C0ZBD9_BREBN Length = 215 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 3/213 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M V+I D HP+ RM+I LL + +++ + + DL++MDI++P Sbjct: 1 MNAYRVLIADDHPMARMAIRSLLDPDPSFEVIGEAQNGEEAFLLCGQIQPDLVLMDINMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G + +K+ +KV+ LS + AIQ GA G++ K + +D + + + Sbjct: 61 KWSGLEATREVKKAYPHIKVVILSVSDDVADLITAIQFGAQGYLLKNLEPDDWINYLHAL 120 Query: 121 LSGYTFFPSETLNYIKSNKCSTNSST---VTVLSNREVTILRYLVSGLSNKEIADKLLLS 177 L + E + ++ VL+ RE I+ Y+ +G +N+EI++ L+++ Sbjct: 121 LGEDSELTREMATRLMYRFRQEEATDEMVPAVLTPREREIVMYVGAGKTNREISEALIIA 180 Query: 178 NKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H NI KL L + V+L YA + L+ Sbjct: 181 ENTVKNHLKNILEKLQLANRVQLAAYAVRHHLV 213 >UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4B6_LISGR Length = 214 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 54/211 (25%), Positives = 107/211 (50%), Gaps = 5/211 (2%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP-GTD 63 ++I D H ++R +++ ++ +++++ D ++ + D+++MD+ +P G + Sbjct: 2 KLLIADDHAVVRSALKFMINAQKDMEVIGDAADGTEAFLFIESNRPDIVLMDLSMPPGEN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G KRI + KV+ L+ E Y +A+QAGA G++ K + + + A++ ++ G Sbjct: 62 GLLTTKRITEAFPETKVILLTMHDEEAYITQALQAGAQGYIMKNSSEELLLDAIRSVMGG 121 Query: 124 YTFFPS----ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 + + + + + + LS RE IL + G NKEIA++L +S K Sbjct: 122 QIIIDPVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAERLFISAK 181 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV HKS+I KL + +L+ + +LI Sbjct: 182 TVEVHKSHIMKKLEMKKFSDLLRFCVKEQLI 212 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 2/204 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V ++D H ++R + LL+ + L +V + D + + + D+++MD+ +P D Sbjct: 2 IRVYLVDDHQLVRAGVRTLLESDPGLSVVGEARDGQEAVAGIDAAASDVVLMDLSMPVMD 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + I +VL L+S S+ + AGA G+V K + D+ AV G Sbjct: 62 GVEATRAILSTHPDTRVLVLTSFSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHAAARG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSA 183 + + S LS RE +LR + GL+NK++A L ++ +TV A Sbjct: 122 EVPIDPRVAGALL--PSAGGPSVADRLSPRETQVLRLVAQGLANKQVARALGITERTVKA 179 Query: 184 HKSNIYGKLGLHSIVELIDYAKLY 207 H ++ ++G+ +A+ + Sbjct: 180 HLGRVFREIGVLDRTSAALWARDH 203 >UniRef50_C1TL94 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL94_9BACT Length = 215 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 4/211 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +II D H + + +L + +L ++ + ++ D+++MD+ +P + Sbjct: 2 IPLIIADDHELFLEGVRDILSREDDLDVLALARTGQEALELTLQHHPDVVVMDVTMPKMN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +RIK VK+L LS ++ ++AGA+G+ K ++ A+ ++ SG Sbjct: 62 GIEASRRIKSSLGDVKILALSMHADKRLIAEILKAGASGYALKEGSSEELIRAIHIVSSG 121 Query: 124 YTFFPSETLNYIKSNKC----STNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 T+ + + + + + S ++LS+RE +L L G S KE+A L +S Sbjct: 122 ETYLSPKIASILIKDYLKLLDTAVPSRASLLSDREREVLALLAKGSSTKEVASSLHISKN 181 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H+ I KL +I ELI +A LI Sbjct: 182 TVDTHRRRIMEKLDCGNIAELIRFAIREGLI 212 >UniRef50_A2SLK8 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiales RepID=A2SLK8_METPP Length = 226 Score = 259 bits (663), Expect = 6e-68, Method: Composition-based stats. Identities = 60/223 (26%), Positives = 106/223 (47%), Gaps = 16/223 (7%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRT-----RPVDLIIMDID 58 V+I D H I+R I+ +L ++ + + + + +R P D++++DI Sbjct: 2 IRVVICDDHVIVRQGIKQILADAGDIALAGEAGNGPDAMTLVRAGAAAGTPPDVVLLDIA 61 Query: 59 LPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQ 118 +P DG LK +K + VL LS+ + YA R+++ GA G+++K D + A++ Sbjct: 62 MPQRDGLDVLKSLKAEFPRLPVLMLSTYPDRQYAVRSLKLGAAGYLNKSADSEQMIDAIR 121 Query: 119 MILSGYTFFPSETLNYIKSNKCST-----------NSSTVTVLSNREVTILRYLVSGLSN 167 + G F + + + LS+RE + L +G S Sbjct: 122 RVAQGKLFITPSVAEQLAGAVGAGIGSRKGGVGDDEAPLHERLSHREYQVFGLLAAGKSV 181 Query: 168 KEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 EIA++L+LS+ TVS +++ I K G+ + VEL YA EL+ Sbjct: 182 GEIAEQLVLSSNTVSTYRARILEKTGVRNDVELALYAVRQELM 224 >UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67JS2_SYMTH Length = 211 Score = 259 bits (663), Expect = 6e-68, Method: Composition-based stats. Identities = 51/210 (24%), Positives = 107/210 (50%), Gaps = 2/210 (0%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P V+I+D H ++R ++ LL + ++++V + R + R+ D++++D LP Sbjct: 2 PIRVLIVDDHELLREGLKSLLSREEDMEVVGEAAGGREAVALCRSLRPDVVVLDARLPDV 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG +++++ V VL L++ S+ A++AGA G+V K D+ +++ + Sbjct: 62 DGVEVCRQLQEEMPEVAVLMLTTFSDSDLVLGAVRAGARGYVVKDVLGMDLKRSIRAVAR 121 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTV--LSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 G + + Y+ S ++ L+ +++ I+R + G +N+EIA+++ LS KT Sbjct: 122 GEVAMDPKVVGYLMQQMRSPSADKEERIPLNRQQLAIIRLVAQGYTNREIAERMFLSEKT 181 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V + + ++G+ + VE A I Sbjct: 182 VKGYLAEAMRRMGVKNRVEAAMVASKNGWI 211 >UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SCN0_METPP Length = 210 Score = 258 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 58/208 (27%), Positives = 98/208 (47%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 V+++D H I+R + LL+ S++ +V + D ++ R ++++D+ LPG Sbjct: 2 TIRVMLVDDHAIVREGYKRLLELQSDIVVVAEAGDGGEALNQWRALRPAVVVIDLGLPGM 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G + R++Q ++L S + + +A++AGA G+V+K + + + AV+ + Sbjct: 62 GGLELIARLRQRDEACRMLAFSMHRDAVWVAQALRAGALGYVTKSSAPSQLVAAVREVNQ 121 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G + + S S LS RE ++R LV G + +EIA L LS KTV Sbjct: 122 GRRVLSPDVSGEVASALLDPQDSAAHGLSPREFEVMRLLVGGRTPQEIAQSLSLSVKTVH 181 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 I KLG S EL A I Sbjct: 182 NVHYQIKSKLGTASDFELARMAWQRGWI 209 >UniRef50_D1CI66 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1CI66_THET1 Length = 218 Score = 258 bits (662), Expect = 8e-68, Method: Composition-based stats. Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 5/210 (2%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 V+I D H + R S+ LL+ +++V + + + ++ R D+++MD+ +PG DG Sbjct: 2 RVLIADDHALFRDSLRTLLEAR-GVEVVGEAETGKEAVELARELRPDVVLMDLKMPGMDG 60 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 + I VKV+ L++ + A+++GA G++ K + F ++ G Sbjct: 61 LAATRMISAEMPEVKVVVLTASEDDEDLFEAVKSGALGYMFKDVRSDQFFELLEAASRGE 120 Query: 125 TFFPSETLNYIKSNKCST---NSSTVTVLSNREVTILRYLVSGL-SNKEIADKLLLSNKT 180 F + VL+ RE IL LV G+ SNKE+A++L+LS T Sbjct: 121 PAFTPGLARKLLREMSKPAGRAEREPEVLTEREQEILELLVQGVTSNKELAERLILSENT 180 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V H NI KL L + +++ YA + L+ Sbjct: 181 VKYHLRNILDKLHLQNRTQVVAYALQHGLV 210 >UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ectothiorhodospiraceae RepID=B8GSX5_THISH Length = 220 Score = 258 bits (661), Expect = 8e-68, Method: Composition-based stats. Identities = 58/211 (27%), Positives = 106/211 (50%), Gaps = 4/211 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNS---ELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 V+++D H ++RM I LL + + +Q+V + + + D+++MDI++P Sbjct: 2 IDVLLVDDHELVRMGIRGLLDERAAVTGIQVVGEAHSGEEALVEAKRLKPDVVLMDINMP 61 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G G +RI + Q +VKVL L++ E ++AGA+G+++K ++ A+Q Sbjct: 62 GIGGLVATRRIVEAQPSVKVLVLTAMDEGPVPRWVLEAGASGYLTKGCRIEEMIAAIQGA 121 Query: 121 LSGYTFFPSETLNYIK-SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 + G + ++ LS RE IL ++ G + + IA L +S K Sbjct: 122 MQGERHISPAVAQRLALGGLAKGQANPFDELSGRERQILLMILQGQTPQAIATALNISPK 181 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TVS +K + GKLG+ + ++L+ A + LI Sbjct: 182 TVSTYKCRVMGKLGISNDMQLVTLAAQHGLI 212 >UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Actinomycetales RepID=D2AUN6_STRRD Length = 226 Score = 258 bits (661), Expect = 8e-68, Method: Composition-based stats. Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 7/214 (3%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V++ D +IR + +L + E+++V + D R ID + + D++++DI +P D Sbjct: 2 IRVLLADDEAMIRAGVRAILAADPEIEVVAEAGDGREAIDLVLSHRPDVVLLDIRMPRMD 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G + ++++ V+ L++ E Y RA+ GA GF+ K D ++ + + G Sbjct: 62 GLAAVAELRRVAPGTAVVMLTTFGEDDYIARALGEGAGGFLLKSGDPRELLAGIHAVAEG 121 Query: 124 YTFFPSETLNYIKSNKCST-------NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 + + + + V L+ RE +L + GLSN +IA +L L Sbjct: 122 AAYLSPRVAHRVITQLTGGRMTRVVAAREQVAALTPRERDVLALVGEGLSNGQIARRLYL 181 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV AH S I +LG + V+ A L+ Sbjct: 182 VEGTVKAHVSAILTRLGARNRVQAAILAHEAGLL 215 >UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z2_9FIRM Length = 209 Score = 258 bits (661), Expect = 8e-68, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 104/208 (50%), Gaps = 4/208 (1%) Query: 7 IIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFT 66 +I+D H +IR I++LL+ S + + + + L +P+DL+IMDI +PG G Sbjct: 1 MIVDDHLLIRAGIKLLLKNTSAYTVTAEAESGEEALRLLAQQPIDLVIMDISMPGMGGLA 60 Query: 67 FLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTF 126 ++ I+ VK+L LS + Y +A+Q GA G++ K + N++F A+Q++ G + Sbjct: 61 CIREIRAHYPAVKILVLSMHEDEEYIYKAMQYGAMGYLPKTSADNELFDALQVLSQGRRY 120 Query: 127 FPSETLNYIKSNKCST----NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + +VL+ RE + L+ G + EIA++L LS KTV Sbjct: 121 LSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHLSVKTVD 180 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 HK +IY KL EL+ A L+ Sbjct: 181 THKKHIYEKLHCSRRSELVTLALRNGLL 208 >UniRef50_P94439 Uncharacterized transcriptional regulatory protein yfiK n=4 Tax=Bacillales RepID=YFIK_BACSU Length = 220 Score = 258 bits (661), Expect = 8e-68, Method: Composition-based stats. Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 10/216 (4%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +II D I+R + LLQ EL ++ + + + + D+++MDI +P ++ Sbjct: 2 IKIIITDDQDIVREGLASLLQLREELDVIATARNGQEAFEKAKELEPDIVLMDIRMPVSN 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G K I +VKVL L++ + A++ GA+G++ K + I AV + SG Sbjct: 62 GVEGTKLITSSLPSVKVLMLTTFKDSALIAEALEEGASGYLLKDMSADTIVKAVMTVHSG 121 Query: 124 YTFFPSETLNYIKSNKCS----------TNSSTVTVLSNREVTILRYLVSGLSNKEIADK 173 P E + + + + L+ RE+ +L L GL+NKEIA+K Sbjct: 122 GMVLPPELTAQMLNEWKREKQLKGINEIEKPNELLDLTEREIEVLAELGYGLNNKEIAEK 181 Query: 174 LLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 L ++ TV H SNI KL + + Y+ Y + Sbjct: 182 LYITEGTVKNHVSNIISKLAVRDRTQAAIYSVRYGV 217 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 258 bits (661), Expect = 8e-68, Method: Composition-based stats. Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 6/209 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRT----RPVDLIIMDID 58 P V+++D H ++R + + L +L +V + D + +L DL+I DI Sbjct: 18 PARVLLIDDHALVRDGMRMHLTLQPDLYVVGEADGGEAALAWLERAGARERPDLVITDIG 77 Query: 59 LPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQ 118 + G G + + + VL +S YA +A++AGA G+V K +++ A++ Sbjct: 78 MRGMGGIALTAALHEQYPEIAVLVVSMHDNLEYARQAVRAGARGYVLKDAPADELMAAIE 137 Query: 119 MILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 +L+G F+ + + + + L+ RE IL + G++NKEIA +L +S Sbjct: 138 AVLAGRVFYSARIARGMAEQM--PATGPLDALTRRERDILGCIGRGMANKEIATQLGVSV 195 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLY 207 +TV H+ N+ KLG+ L+ YA Sbjct: 196 RTVETHRLNLKRKLGIEGRAGLVKYAVEQ 224 >UniRef50_C7R398 Two component transcriptional regulator, LuxR family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R398_JONDD Length = 230 Score = 258 bits (661), Expect = 9e-68, Method: Composition-based stats. Identities = 48/213 (22%), Positives = 91/213 (42%), Gaps = 8/213 (3%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 +II+D ++R + ++L + + +V + + D+++MDI +P DG Sbjct: 10 RIIIVDDDALVRAGLRMILGGDPGITVVAEGTHGEEAVSLYAAHQPDVVLMDIRMPVRDG 69 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 + K I VL L++ + +A++AGA GF+ K D+ AV + G+ Sbjct: 70 LSATKDIVTRWPHANVLVLTTFDTDEFIVKALRAGARGFLLKDTSPPDLVRAVNLAGDGH 129 Query: 125 TFFPSETLNYIKS--------NKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 + + + V L+ RE+ + + + G SN+EI+ L + Sbjct: 130 PTLSPSVTAQLIAKVSEEPDTGRQRQARRMVEQLTERELDVAQQIAQGKSNQEISQTLYM 189 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 S TV H S I+ K + + V++ L Sbjct: 190 SIPTVKTHISRIFTKFDVDNRVQIAIRMHDAHL 222 >UniRef50_C6WIC9 Two component transcriptional regulator, LuxR family n=31 Tax=Actinobacteria (class) RepID=C6WIC9_ACTMD Length = 302 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 4/211 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I D ++R S EVL+ +L+++ +D + D+++MD+ +P D Sbjct: 71 IGVVIADDQALLRGSFEVLVGSAPDLRVLGTAEDGERAVAVAARVRPDVVLMDVRMPNVD 130 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G RI Q+ V+VL L++ Y A++AGA+GF+ K D+ A++++ SG Sbjct: 131 GIEATARICAAQAGVRVLILTTFDLDEYVYAALRAGASGFLLKDTPPADLLAAIRVVASG 190 Query: 124 YTFFPSETLNYIKSNK-CSTNSSTVTVL---SNREVTILRYLVSGLSNKEIADKLLLSNK 179 + + + + L + RE +LR + GLSN EI + L +S Sbjct: 191 EALLSPSVTRRLITEFAARPAARPLPALDAVTAREREVLRLVAEGLSNTEITEALHVSRG 250 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 T+ H + KLG +L+ A L+ Sbjct: 251 TLKTHVGRLLHKLGARDRAQLVIAAYESGLV 281 >UniRef50_C4XNR8 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNR8_DESMR Length = 220 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 55/215 (25%), Positives = 105/215 (48%), Gaps = 6/215 (2%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M T +I+ D H ++R + +L+ + +V + D + + P +++++D+ +P Sbjct: 1 MATTRIILADDHTVLRTGLRLLIDNQPDFTVVGEAADGEALLALVERVPAEVLVLDLSMP 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G +K +K +K+L L+ Y A+ AGA G++ K +++F A++ + Sbjct: 61 RVSGLECIKELKSRGQEIKILVLTMH-GREYVKEAMAAGALGYIEKQALDSELFVAIRTV 119 Query: 121 LSGYTFFPSETLNYIKSNKCST-----NSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 SG + + + S + VL+ RE +L+ LV G + +IA L Sbjct: 120 ASGRRYMSPDNAEVLLDQLLSPTPQAASPDPYAVLTAREREVLKLLVRGHTLTQIAGLLH 179 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 LS KT+ HK+++ KL L +L+DYA + L+ Sbjct: 180 LSVKTIDTHKTHVMEKLNLTHKSQLVDYALRHGLL 214 >UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae RepID=B9E7V9_MACCJ Length = 210 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 64/211 (30%), Positives = 109/211 (51%), Gaps = 3/211 (1%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRP-VDLIIMDIDL 59 MK +I++D H I+R ++ LL + ++ ++ R +++L DLIIMD+ + Sbjct: 1 MKRMDIILVDDHHIVRQGMKFLLSTEASFNVIADFNNGRELLEHLDETQLPDLIIMDLVM 60 Query: 60 PGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 P +G +RIK VKVL LSS + + + AGA+G+ K ++ + + ++ Sbjct: 61 PELNGIEATRRIKAKYPDVKVLVLSSFIDEEHVLGVMDAGADGYEMKDSEPKALINTIKQ 120 Query: 120 ILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 I +G F + + + LS RE+ +L+ + GL+NKEIA+KL +S K Sbjct: 121 IAAGEQIFHPDVMK--VRKSGMNLAHLRNPLSKRELEVLKAMSEGLTNKEIAEKLFVSEK 178 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H S+I+ KL + + Y Y+LI Sbjct: 179 TVKTHVSHIFAKLEVGDRTQASMYGVKYKLI 209 >UniRef50_C7Q058 Two component transcriptional regulator, LuxR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q058_CATAD Length = 258 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 97/248 (39%), Gaps = 41/248 (16%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+I+D +IR + +L+ ++V + D + D+++MDI +P D Sbjct: 2 VKVLIVDDQVLIRAGMAAILRAAPGYEVVGEACDGVEAVTMAALTEPDVVLMDIRMPDMD 61 Query: 64 GFTFLKRIKQIQST--VKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G + I ++L L++ Y A++AGA+GFV K + A++ + Sbjct: 62 GIAATRAILGSGRENLPRILILTTFDMDQYVYEALRAGADGFVLKDTPPERLLAALKAVA 121 Query: 122 SGYTFFPSETLNYIKSN---------------------------------------KCST 142 G T F S + S Sbjct: 122 DGDTLFSSTVTRRLVQAYVTATGLDGEPQGPGPGPGPGPVATPAPGLVPRSRRPDGPSSA 181 Query: 143 NSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELID 202 + + L+ RE +LR + +GLSN EIA++L++S TV H + KL L S + + Sbjct: 182 ERAALAALTTRETDVLRLVATGLSNGEIAERLVVSEGTVKTHLNRAMAKLNLSSRAQAVV 241 Query: 203 YAKLYELI 210 A L+ Sbjct: 242 LAYESGLV 249 >UniRef50_A9VLR5 Two component transcriptional regulator, LuxR family n=31 Tax=Bacillaceae RepID=A9VLR5_BACWK Length = 595 Score = 257 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 5/212 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++I+D P +R S+ LL + +L +V +D ID +I+MD+D+ D Sbjct: 383 IRLLIVDDQPFVRESLRTLLDRYEDLNVVGLAEDGNQAIDLCGRLQPHVILMDLDMQHMD 442 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G K+IKQ ++VL ++ + A +++ GA+GF+ K + ++ + +++I G Sbjct: 443 GVEATKKIKQQWPHIRVLIFTTFQDTEQALESLRNGADGFLLKSIETLELANTIRLIHKG 502 Query: 124 YTFFPSETLNYIKSNKCSTNSSTVT-----VLSNREVTILRYLVSGLSNKEIADKLLLSN 178 T + I + + L+ RE+ IL+ + GL IA +L LSN Sbjct: 503 GTLIDQGMSHKIFEKFDEQIETPQSKATAYELTAREIEILQLVAKGLRYTTIASRLYLSN 562 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV + S Y KLG+ + E + A +I Sbjct: 563 GTVRNYASTAYTKLGVRNKEEAVQKALEIGII 594 >UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family protein n=2 Tax=Neptuniibacter caesariensis RepID=Q2BNR9_9GAMM Length = 214 Score = 257 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 52/206 (25%), Positives = 98/206 (47%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 ++I D H ++R LL VL+ + ++ D++IMD+++ G G Sbjct: 2 KIVIADDHAVVRQGYASLLSAMLAPCEVLEAGNGDQAYSLCQSDSPDVVIMDVNMQGISG 61 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 +RI Q + ++LF S E +A++AGA G+++K + AV+ + +G Sbjct: 62 IEATRRILQKKPDTRILFFSMYDEIPVVTQALEAGAKGYITKSCTPEILIEAVKKVSAGQ 121 Query: 125 TFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAH 184 + E + ++ + ++ RE I L G + KEI+++L +S+KTVS + Sbjct: 122 LYVEHELAMRLAVSRPEQKDKRLKEMTQREFEIFVMLAQGSNVKEISEQLCISSKTVSNY 181 Query: 185 KSNIYGKLGLHSIVELIDYAKLYELI 210 + + KL + S EL+ A L+ Sbjct: 182 TAILKSKLNIGSTAELVHLAIETGLV 207 >UniRef50_B1ZU87 Two component transcriptional regulator, LuxR family n=4 Tax=Verrucomicrobia RepID=B1ZU87_OPITP Length = 212 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 50/208 (24%), Positives = 99/208 (47%), Gaps = 7/208 (3%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 ++++D H ++RM + ++++V ++ I+ R D++++D+ + G Sbjct: 9 KIRILLVDDHMVMRMGLVTATSDEPDMEVVADVENGAEAIEAYRAHRPDVVVLDLRMHGM 68 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G ++ ++ V+VL S+ + +A++AGA+GFV K + A++ + + Sbjct: 69 SGVDAIRALRSEFGNVRVLVYSNYAAGEEVYQALKAGASGFVVKEMALERLLEAIRKVHA 128 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G + P E + + LS RE+ +L+ + G SNKEIA +L + T Sbjct: 129 GEQYVPPEIAMRM-------GERLMAQLSPRELDVLKLVAKGRSNKEIAAELHVVEGTAK 181 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 H +NI KLG+ + I A +I Sbjct: 182 IHVANILTKLGVSDRTQAIVVAVRRGII 209 >UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomycetales RepID=D0LE76_GORB4 Length = 228 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 3/210 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D +IR + +L+ IV + D + D+++MD+ + D Sbjct: 14 IRVLLVDDQELIRTGLRRILRVRDGFHIVGECADGSEVPAAVAEHSPDVVVMDLRMRNVD 73 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G T + + VL L++ + A++AGA GF+ K + + AV+ ++ Sbjct: 74 GITATSMLAALNDPPPVLVLTTFDDDKLLSGALRAGAAGFILKDSPAESLIWAVRAVVRD 133 Query: 124 YTFFPSETLNYIK---SNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 F + + + +T L+ RE +LR + G +N EIA L +S T Sbjct: 134 GAFLDPAVTGRVLTGYRRSTTGDIATPDELTERETDVLRLVARGRTNAEIAAGLGISEVT 193 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V +H ++I+ KL L I YA + L+ Sbjct: 194 VKSHINHIFTKLDLRDRAAAIVYAFDHSLV 223 >UniRef50_C1A730 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A730_GEMAT Length = 209 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 6/208 (2%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 ++++D H I+R + LL +Q++ + D ID R D++I D+ + Sbjct: 5 TIRILLVDDHAILREGLAALLNGVDGMQVIGQAGDGATAIDLYRNLLPDVVICDLRMVPM 64 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG I+ +V+ L++ R ++AGA+ ++ K + + V + + Sbjct: 65 DGTEVTSTIRAEFPAARVILLTTYDTDEEVFRGLRAGASSYLLKDVEPAQLIDTVHAVYA 124 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G + + S L+ R++ +LR L G SN EIA+ L +S TV Sbjct: 125 GRKAIDPSIAAKLAEHVAS------DALTARQLEVLRSLAEGRSNIEIANTLYISEGTVK 178 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 AH I KLG + + LI Sbjct: 179 AHIKAILQKLGARDRTQAVTIGIKRGLI 206 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 256 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 98/208 (47%), Gaps = 5/208 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG-T 62 ++++D HPI+R + LL + ++V D L++ D+++MD+ L G T Sbjct: 2 IRIVLVDDHPILRHGMRTLLDTQEDFEVVGDCGDPEEYRLLLKSARPDIVLMDLALGGDT 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG + + VL ++ R++ AGA+G++ K + ++F A++ Sbjct: 62 DGVALTAHTRATSPSTAVLVFTTYDSDADFVRSLDAGASGYLLKDSTPVELFAAIRTARD 121 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G + + + + L+ RE+ +L L +G +N+++ ++L +S TV Sbjct: 122 GGSALSPAVASRLMDRMRAPQ----ESLTPREIEVLALLATGRTNRQVGERLFVSETTVK 177 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 H ++I+ KLG+ + + A LI Sbjct: 178 THVNHIFTKLGVDTRAAAVSRAMKEGLI 205 >UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D2Q2Q8_9ACTO Length = 216 Score = 256 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 97/214 (45%), Gaps = 7/214 (3%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 V+++D ++R + +L+ +L++V + D R + R D+++MD+ +P Sbjct: 2 IRVLVVDDQDLVRAGLRLLIDNTDDLRVVGEASDGREALALAREHQPDVVLMDLQMPVMG 61 Query: 64 GFTFLKRIKQIQS--TVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G I+ V+ L++ A+QAGA+G++ K +++ A++ + Sbjct: 62 GVETTAAIRADPLLKDTPVVVLTTFDHDADVVDAVQAGASGYLLKDLAADELRGAIRTAV 121 Query: 122 SGYTFFPSETLNYIKSNKCSTN-----SSTVTVLSNREVTILRYLVSGLSNKEIADKLLL 176 +G + + T+ L+ RE+ IL ++ GLSN+EI L L Sbjct: 122 TGGAPIAPKVAKLMMHRISRMPSRKVQEETLAGLTARELDILAHVGRGLSNEEIGQALFL 181 Query: 177 SNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 S +T + S + KLG+ +L+ A L+ Sbjct: 182 SPETARTYVSRLLAKLGVRDRSQLVVLAHKAGLV 215 >UniRef50_C0GHS5 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHS5_9FIRM Length = 219 Score = 256 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 1/211 (0%) Query: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP 60 M+ + I+D H ++R+ ++ L + EL+IV + + + D++++D+ L Sbjct: 1 MEKIKIFIVDDHEVVRLGLQGLFARYEELEIVGEAASGEEAVQVVPVIKPDVVLLDVRLQ 60 Query: 61 GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI 120 G G + I +KV+ LSS +E A AGA+ +V K ++ A++ + Sbjct: 61 GIHGADTCRLITSAVPGIKVVMLSSFAEPEEVQAAFTAGASAYVLKNITSGNVIKAIKAV 120 Query: 121 LSGYTFFPSETLNYIKSN-KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 + G +F E + S + +S ++ LS RE IL + G +NKEI +L LS K Sbjct: 121 MQGESFIDPEITEQVMSLIRGEKAASQISGLSKREEEILHLVGEGKTNKEIGRELFLSEK 180 Query: 180 TVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 TV H S I KLG+ + + + +I Sbjct: 181 TVRNHVSRILDKLGVSNRSQAAAFMARRSVI 211 >UniRef50_C1B8T3 NarL family two-component response regulator n=61 Tax=Bacteria RepID=C1B8T3_RHOOB Length = 276 Score = 256 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 5/198 (2%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDL-PGT 62 +++ D H I+R + LL+ ++++V + + T PVDL++MD+ PGT Sbjct: 2 IRLLLADDHAIVRAGLRALLEHEDDIEVVGEAATADAAVALCATTPVDLVLMDLRFGPGT 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G + ++ + + VL +++ A+ AGA G++ K ++ AV+ + Sbjct: 62 SGVDATRNLRSLPNPPHVLVVTNYDTDADILDAVAAGAAGYLLKDTPPPELLAAVRAASA 121 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G + + + + +S LS RE+ +L + +G SN+EI +L LS TV Sbjct: 122 GDSVLSPAVASKLMTRVRRPATS----LSPREIQVLTLVAAGRSNREIGKELFLSETTVK 177 Query: 183 AHKSNIYGKLGLHSIVEL 200 +H +I+GKLG+ S Sbjct: 178 SHLVHIFGKLGVKSRTSA 195 >UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacillales RepID=C0Z4M7_BREBN Length = 235 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 98/227 (43%), Gaps = 18/227 (7%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 + V+++D +IR + +++ ++++ + + + + D+++MD+ +P Sbjct: 8 ETIRVVLVDDQTMIRQGLGYVIKMQKDMEVSGEASNGEEAVKIVGEIIPDVVLMDVQMPN 67 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 G + I ++ +VKVL L++ Y I+AGA G++ K +D D+ ++ Sbjct: 68 MSGIDATREITRLHPSVKVLILTTFDTYDYIVDGIRAGAVGYMLKDSDSQDMLDLIRRAH 127 Query: 122 SGYTFF-----PSETLNYIKSNKCSTNSST-------------VTVLSNREVTILRYLVS 163 G F ++ + + + L++RE +L L Sbjct: 128 QGEALFYTATAAKALAEVLQFQQKNYEPDSDADCDSTLPPLVMFDQLTDRERDVLEQLSY 187 Query: 164 GLSNKEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 G N +IA LL+S TV H I K+G+ + + A Y+++ Sbjct: 188 GKRNDQIAQHLLISGGTVKTHIHRILQKMGVEDRTQAVAKAIRYKIV 234 >UniRef50_A1VB77 Two component transcriptional regulator, LuxR family n=5 Tax=Desulfovibrio RepID=A1VB77_DESVV Length = 216 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 116/211 (54%), Gaps = 4/211 (1%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P +V+I++ I+R I+ LL N E IV + D + + D+++MD+ LP Sbjct: 2 PITVVIVEDLDIVREGIKALLDANGEFIIVGEASDGIEALRIVEKHAPDIVLMDLTLPVM 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +G ++ IK+ + T KVL L++ + R + AGA+G++ K ++ +F A+Q +L+ Sbjct: 62 EGAEAIREIKRRRETTKVLALTAHKKDSLIYRTLSAGADGYLLKNASRDILFQAMQTVLA 121 Query: 123 GYTFFPSETLNYIKSNK----CSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 G + E + + + +S + +LS+RE +L+ + G NK +A+KL +S+ Sbjct: 122 GRRYISPEISDLLIDDFLRHGRRDEASMLDLLSDREKQVLKLVAEGHGNKAVAEKLCISH 181 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYEL 209 KTV HK+N+ KLG S EL+ +A + L Sbjct: 182 KTVEKHKANLKRKLGTASTAELVTFAIEHGL 212 >UniRef50_C5UZV9 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZV9_9PROT Length = 213 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 108/208 (51%), Gaps = 1/208 (0%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 ++++D H +IR ++ LL+ +L+I + I LR P DL+++DI+LP Sbjct: 2 IQILVVDDHALIRKGLKQLLEDTPDLKITGEASSGTEAISMLRAAPFDLMLLDINLPDKH 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G LK+ K Q +K++ LS E Y RA++AGA G+++K + + + A++ +LSG Sbjct: 62 GIEVLKQFKSEQPQLKIIILSMYPEDQYGVRALKAGAMGYINKQSASDVLIKAIRHVLSG 121 Query: 124 YTFFPSETLNYIKSNKCSTNSST-VTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 + + +N + LSNRE L + SG + EI+ + LS KTVS Sbjct: 122 KKYISEILAEQLLNNLIGESQELMHQNLSNREYQTLCLMASGKTLSEISQIMALSPKTVS 181 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYELI 210 ++S + K+ + E I YA + L+ Sbjct: 182 VYRSRMLAKMTFTNNAEAIHYAITHRLV 209 >UniRef50_A9B4P1 Two component transcriptional regulator, LuxR family n=11 Tax=Bacteria RepID=A9B4P1_HERA2 Length = 257 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 16/224 (7%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 V+++D HP+ R + L +++I+ + + + D+++ D++LP Sbjct: 4 TVKVLMVDDHPLFRQGVRWALSSERDIKIIGEGSSAEEGLVLISEHEPDVVLTDLNLPNM 63 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG F + I++ + V+ LS +A A++AGA + SK + ++ + Sbjct: 64 DGLEFTRTIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYYSKEISPKTLATVLRRVAR 123 Query: 123 GYTFF------PSETLNYIKSNKCSTNS----------STVTVLSNREVTILRYLVSGLS 166 G + I + + S + LS+RE+ +L ++ SG + Sbjct: 124 GEYVINDVMFEDPRVADRILTQFRGLQTGIVAEPDLDISLFSPLSDREIEVLEHIASGAT 183 Query: 167 NKEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 NK+IAD L +S +TV H S+I KL L+ + + YA I Sbjct: 184 NKDIADALKISTQTVKNHISSILRKLSLNDRTQAVLYALRRGWI 227 >UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM25_SORC5 Length = 233 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 3/212 (1%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 + ++D HP++R L ++ +V + + + D++++D+++P Sbjct: 20 SKLHIYLIDDHPVVREGFARALSDEPDMVVVGQAGTAADALRETASCKPDVVLVDLNIPD 79 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG L ++ K+L LS + F A++AGA G++ K + ++ ++ I Sbjct: 80 RDGIELLGALRAQLPQAKLLVLSGYDDEFRVAEALRAGAQGYLVKTSKLEEVIEGIRRIA 139 Query: 122 SGYTFFPSETLNYIKSNKCSTNSS---TVTVLSNREVTILRYLVSGLSNKEIADKLLLSN 178 +G S + S + L+ RE +LR L +G+S +E A +L +S Sbjct: 140 TGGAPLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAARLTISP 199 Query: 179 KTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 KTV H+ IY KLG S VEL A LI Sbjct: 200 KTVETHRVRIYAKLGCKSAVELTRIAVRTGLI 231 >UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ASJ5_PELPD Length = 208 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 103/207 (49%), Gaps = 4/207 (1%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 ++I D H I+R + ++L+ S + + + D R + D+++MDI +P Sbjct: 2 TVRILIADDHAIVREGLTMILES-SGMIVAGEARDGRDALSQTEVLRPDVVVMDIAMPEL 60 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 +G + I VKV+ LS + + RA+QAGA ++ K + + + AV+ ++ Sbjct: 61 NGIDATRMIHGRLPEVKVIVLSMHNTREHVFRAMQAGARAYLLKESAGSGLVDAVRAVIR 120 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G +F + S + LS RE +++ +V G ++ EIA+ L LS K++ Sbjct: 121 GECYFGEGVD---APQAVAGFKSPLDSLSLREREVIQLVVEGRTSAEIAELLSLSPKSIE 177 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLYEL 209 ++S + KLG+ +I L+ +A + + Sbjct: 178 TYRSRLMVKLGVGNIPALVKFALQHGI 204 >UniRef50_B4B0U5 Two component transcriptional regulator, LuxR family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B0U5_9CHRO Length = 224 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 8/216 (3%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P ++++D H ++R ++ L N + +++ + D I+ D+I+MDIDLP Sbjct: 9 PIRILLVDDHNLMRRGLKGLFALNPDYEVIGEATDGLQAIELQEQLKPDIILMDIDLPLL 68 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG + +RIK+ + K+L LS+ + +GA+G+ K + ++ +++I Sbjct: 69 DGISATQRIKRDDTATKILALSAYDHDTQVLGMLASGADGYCLKNIEWEELLVIIRLISH 128 Query: 123 GYTFFPSETLNYIKSNKCSTN--------SSTVTVLSNREVTILRYLVSGLSNKEIADKL 174 G + + + S + VTVLS RE IL+ + G SNK+IA++L Sbjct: 129 GGVYLDPRIAHKVSHLLKSGSFAVETNTTPKAVTVLSERERLILKLIAEGFSNKKIAEQL 188 Query: 175 LLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 LS T+ ++ + KL + V+ A LI Sbjct: 189 FLSPGTIKSYVRMLLNKLSVDDRVQAAAKAVREGLI 224 >UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=Actinomycetales RepID=C4RJ91_9ACTO Length = 232 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 12/219 (5%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 +++D ++R I VLL ++++V + D + + D+++MDI +P D Sbjct: 2 IRALVVDDQGLVRAGIRVLLDTAPDIEVVGEAADGHNAVRLVERLRPDVVLMDIRMPRVD 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G +R+ VL L++ ++ A+ AGA G++ K + D+ AV+ G Sbjct: 62 GIEATRRLLAAAPLTNVLILTTFADDDSVYGALSAGAVGYLVKDGEPADMLDAVRRAARG 121 Query: 124 YTFFPSETLNYIKSNKCS------------TNSSTVTVLSNREVTILRYLVSGLSNKEIA 171 L + +++ + L+ RE +L + GLSN EIA Sbjct: 122 EPLLAPSVLARVVDRARRSHAADRNGDIEQPDTAVLAALTARERDVLSLVGVGLSNAEIA 181 Query: 172 DKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 L + TV H + KLG+ + V+ A L+ Sbjct: 182 RDLNVGVTTVKTHIVALLEKLGIRNRVQAGILAHRLGLV 220 >UniRef50_UPI0001789139 two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=UPI0001789139 Length = 216 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 8/211 (3%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRT-RPVDLIIMDIDLPGT 62 SV+I D P IR S+++L+ + ++++ + + L D+++MDI +P Sbjct: 2 ISVLIADDDPFIRESLKLLVGMDPDIEVSAVAEHGEEALSLLMDGLHADVVLMDIRMPVC 61 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG +RI++ V+VL L++ + Y A++ GA+G++ K + I ++ + Sbjct: 62 DGVEGTRRIRERYPDVRVLMLTTFDDDDYIVEALRNGASGYLLKNIPPDRIIQGIKTVHD 121 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTV-------LSNREVTILRYLVSGLSNKEIADKLL 175 G + + T L+ E ++ + GLSNKEIA +L Sbjct: 122 GNMLIHPDIARKLTGMLRPTPQPVPRSAELEQFGLTPAEKRVVALIAEGLSNKEIAAQLY 181 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKL 206 LS TV + + I GKL L ++ + Sbjct: 182 LSEGTVKNYVTEILGKLNLRDRTQIAIFYLK 212 >UniRef50_C2RNB5 Two-component protein Kinase n=1 Tax=Bacillus cereus BDRD-ST24 RepID=C2RNB5_BACCE Length = 304 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 6/215 (2%) Query: 2 KPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPG 61 K + I+D H IR S+ +L +LQ+V +D ++ D+++MD+++P Sbjct: 89 KQIRLCIVDDHSFIRESLHTILSGLEDLQVVGMAEDGEQALELCGRLKPDVVLMDLEMPN 148 Query: 62 TDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMIL 121 DG K IK+ ++VL LS+ A I+ GA+G+V K D ++ +++++ Sbjct: 149 LDGIHATKMIKKRWPEIRVLILSTFQNTERAKEIIRNGADGYVLKSIDSRELAESIRLVY 208 Query: 122 SGYTFFPSETLNYIKSN------KCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLL 175 G + + + S + LS RE+ IL L G K IA L Sbjct: 209 RGGAMITHDLFHRMWEENKETGLFESRSDGIEYGLSKRELEILELLSQGSRYKTIASTLY 268 Query: 176 LSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 LSN TV + SN+Y KLG+ + E + AK L+ Sbjct: 269 LSNGTVRNYASNLYEKLGVKNREEAVQKAKDIGLL 303 >UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR family n=18 Tax=cellular organisms RepID=B4SLZ0_STRM5 Length = 217 Score = 255 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 105/209 (50%), Gaps = 7/209 (3%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P V+++D HP++R + LL +L+++ + D I + D+++MD+ +P Sbjct: 7 PIGVLVVDDHPLLRDGLAALLGAQPDLRLLGEAADGEEAIACYQRLQPDVVLMDLQMPRL 66 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 DG + RI+ + +++ L++ A RA+QAGA+ ++ K ++++ ++M+ Sbjct: 67 DGVEAIVRIRALDPRARIIVLTTYRGDVRAVRALQAGASAYLLKDMLRHELVDTIRMVAG 126 Query: 123 GYTF-FPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTV 181 G P I ++ LS RE +LR++ GLSNK I +++ +S +TV Sbjct: 127 GRRAPIPPAVAASIAAHVVE------DRLSPRETEVLRHVAGGLSNKRIGERMQISEQTV 180 Query: 182 SAHKSNIYGKLGLHSIVELIDYAKLYELI 210 AH ++ KLG+ + A +I Sbjct: 181 KAHMKSLMDKLGVGDRTHAVTQALRRGII 209 >UniRef50_C5T9P3 Two component transcriptional regulator, LuxR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9P3_ACIDE Length = 239 Score = 255 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 2/205 (0%) Query: 3 PTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGT 62 P ++++D HP++R + + L+ + + + ++ D+++ DI +P Sbjct: 4 PIRILLVDDHPLVRDGVRMRLEATEHICVAGEAASVGESLPLAHALAPDIVLTDIRMPAA 63 Query: 63 DGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILS 122 G ++ V+VL LS + Y RA+ GA G+V K + A++ + Sbjct: 64 SGIHLAAVFREQFPRVRVLVLSMHDDAEYVRRAVSLGARGYVLKDAPAQQLIEAIEAVHQ 123 Query: 123 GYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVS 182 G +F + S+ L+ RE ++L+++ G SNKEIA + S +TV Sbjct: 124 GGCYFSPGLEQLLDDAGSVARSNR--SLTPREASVLQWVSEGRSNKEIAALMGTSVRTVE 181 Query: 183 AHKSNIYGKLGLHSIVELIDYAKLY 207 H+ ++ KL + L+ YA + Sbjct: 182 THRLHLRRKLRIEGQAALMKYAVDH 206 >UniRef50_C5C8Q1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5C8Q1_MICLC Length = 227 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 11/217 (5%) Query: 5 SVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDG 64 ++I D P++ ++ VL+ + V + ++ D+++MD+ +P DG Sbjct: 6 RILIADDQPLMSGALRVLVGSAPGMTCVGVVANGVEAVEACAAIEPDVVLMDMQMPLMDG 65 Query: 65 FTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGY 124 +RIK ++VL +++ + Y A++AGA G++ K + I A+Q + G Sbjct: 66 VEATRRIKDTHPAIRVLAITTFTSEDYLVPALRAGAGGYLLKDAEPPAILGAIQAVHRGE 125 Query: 125 TFFPSETLNYIKSNKCS-----------TNSSTVTVLSNREVTILRYLVSGLSNKEIADK 173 + + ++ S + L+ RE+ +LR L G SN EIA Sbjct: 126 SVLSPAVAAKLLASIERDRPTVGPTSVQPGSPDGSDLTERELGVLRLLARGQSNPEIAAN 185 Query: 174 LLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 L +S TV A+ + I KL + V+LI A L+ Sbjct: 186 LFVSESTVKANLTRIMAKLEVRDRVQLIIRAAQLGLV 222 >UniRef50_B3PFS2 GacA n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PFS2_CELJU Length = 217 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 3/210 (1%) Query: 4 TSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTD 63 T ++++D H ++RM I +L Q+V + R D+++MD+ +PG Sbjct: 2 TKILVVDDHDLVRMGIVRMLADIDGYQVVGDAKSGEEAVTKARILKPDVVLMDVKMPGMG 61 Query: 64 GFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSG 123 G K++ + +K++ +++ + Y R +QAGA G+V+K D +I A+ + G Sbjct: 62 GLEATKKLLTVNPAIKIIAVTACDDDLYPTRLMQAGAVGYVTKGADFTEITDAINKVTRG 121 Query: 124 YTFFPSETLNYIKSNK---CSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT 180 + + + + S LS RE+ + +G +IA+ +S KT Sbjct: 122 DLYMSNSIAQQLALRTFSGANNQESPFEKLSQRELQTAMLIANGQKVNDIANTFCVSPKT 181 Query: 181 VSAHKSNIYGKLGLHSIVELIDYAKLYELI 210 V++++ I+ KL ++S VEL A + L+ Sbjct: 182 VNSYRYRIFEKLDINSDVELTLLAVKHNLL 211 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.219 0.787 Lambda K H 0.267 0.0673 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,286,103,151 Number of Sequences: 3077464 Number of extensions: 168894121 Number of successful extensions: 515024 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 38824 Number of HSP's successfully gapped in prelim test: 10225 Number of HSP's that attempted gapping in prelim test: 417217 Number of HSP's gapped (non-prelim): 56755 length of query: 210 length of database: 1,040,396,356 effective HSP length: 123 effective length of query: 87 effective length of database: 661,868,284 effective search space: 57582540708 effective search space used: 57582540708 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.7 bits) S2: 92 (39.3 bits)