59 c1sqgA_ Probab=99.41   E-value=9.4e-13  Score=99.84  Aligned_columns=110  Identities=17%

Q ss_pred             HHHHHHCCCCCC-EEEEECCCCCHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHC
Q ss_conf             999985178987-79995588447899985269--889999689899999999899649994699963389988877401
Q batch____       201 EWALDVTKGSKG-DLLELYCGNGNFSLALARNF--DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGV  277 (366)
Q Consensus       201 ~~v~~~~~~~~~-~vlDl~cG~G~~sl~La~~~--~~V~gve~~~~ai~~A~~n~~~n~i~n~~~~~~~~~~~~~~~~~~  277 (366)
                      ..+..++++.++ +|||+|||+|..|+.++..+  .+|+|+|.++..++.+++|++++|++|+ .+++|+.......   
T Consensus       232 ~l~a~~l~~~~g~~VLD~cag~G~kt~~la~~~~~~~v~a~D~~~~rl~~l~~~~~r~g~~~~-~~~~d~~~~~~~~---  307 (424)
T c1sqgA_         232 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKAT-VKQGDGRYPSQWC---  307 (424)
T ss_dssp             HTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCE-EEECCTTCTHHHH---
T ss_pred             HHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEE-EEECCCCCCCCCC---
T ss_conf             999997198997869992899788999999712897699971898999999999997499789-9967343233236---


Q ss_pred             CCCCCCCCCCCCCCCCCEEEECCCCCCHH----------------------------HHHHHHHHCCCEEEEEECC
Q ss_conf             11122222222346888899988722644----------------------------8999997218909999589
Q batch____       278 REFNRLQGIDLKSYQCETIFVDPPRSGLD----------------------------SETEKMVQAYPRILYISCN  325 (366)
Q Consensus       278 ~~~~~~~~~~~~~~~~d~~i~dPpR~G~~----------------------------~~~~~~~~~~~~ivYvSC~  325 (366)
                                 ....+|.+++|||.+|.+                            ..+.+++++++++||.+|.
T Consensus       308 -----------~~~~~d~vl~D~pcsg~G~~~~~p~~~~~~~~~~l~~l~~~Q~~lL~~a~~~lkpgG~lvysTCS  372 (424)
T c1sqgA_         308 -----------GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS  372 (424)
T ss_dssp             -----------TTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred             -----------CCCCCCCEEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
T ss_conf             -----------54445520104665655832448125414898899989999999999999762898189997744