BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (148 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriacea... 230 1e-59 UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Esch... 207 7e-53 UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriace... 183 2e-45 UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobact... 172 4e-42 UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriace... 171 5e-42 UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriace... 154 8e-37 UniRef50_Q6TFX1 ORF25 n=3 Tax=Enterobacteriaceae RepID=Q6TFX1_ERWAM 151 5e-36 UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y... 150 1e-35 UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia... 139 3e-32 UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferr... 137 2e-31 UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibac... 136 2e-31 UniRef50_D2NHT0 Putative phage DNA repair protein n=1 Tax=Escher... 135 3e-31 UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97... 135 5e-31 UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria ... 134 7e-31 UniRef50_A1TJG0 DNA repair protein RadC n=1 Tax=Acidovorax citru... 134 1e-30 UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacter... 134 1e-30 UniRef50_C4SWK5 DNA repair protein n=1 Tax=Yersinia intermedia A... 134 1e-30 UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KC... 132 4e-30 UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellacea... 131 6e-30 UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepI... 131 6e-30 UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium v... 131 8e-30 UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria ... 131 8e-30 UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria ... 130 1e-29 UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax... 130 1e-29 UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobact... 129 2e-29 UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriacea... 129 3e-29 UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax... 128 5e-29 UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular orga... 127 8e-29 UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria ... 127 1e-28 UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaprot... 127 1e-28 UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacte... 126 2e-28 UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Ha... 126 2e-28 UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KC... 126 2e-28 UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteri... 126 2e-28 UniRef50_B0RXB0 DNA repair protein radC homolog n=3 Tax=Xanthomo... 126 3e-28 UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria R... 125 4e-28 UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacte... 125 5e-28 UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiace... 124 1e-27 UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomon... 122 3e-27 UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae R... 122 3e-27 UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida... 121 5e-27 UniRef50_C3WF45 Putative uncharacterized protein n=1 Tax=Fusobac... 120 1e-26 UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobac... 120 1e-26 UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacter... 120 2e-26 UniRef50_B1HKP9 DNA repair protein n=1 Tax=Burkholderia pseudoma... 120 2e-26 UniRef50_B1JAY7 DNA repair protein RadC n=4 Tax=Pseudomonas RepI... 117 8e-26 UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus ... 117 1e-25 UniRef50_Q47CZ3 DNA repair protein RadC n=2 Tax=Dechloromonas ar... 116 2e-25 UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacte... 116 2e-25 UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobact... 116 2e-25 UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepI... 114 7e-25 UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobact... 114 8e-25 UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. ... 114 8e-25 UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditroph... 114 1e-24 UniRef50_B8KU95 DNA repair protein RadC n=1 Tax=gamma proteobact... 114 1e-24 UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacte... 113 2e-24 UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae... 113 2e-24 UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris... 112 3e-24 UniRef50_Q02HM7 Putative uncharacterized protein n=1 Tax=Pseudom... 112 3e-24 UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID... 112 4e-24 UniRef50_Q5DY97 DNA repair protein RadC n=17 Tax=Proteobacteria ... 112 5e-24 UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. ... 111 7e-24 UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=... 111 7e-24 UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepI... 111 8e-24 UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdema... 110 9e-24 UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID... 110 2e-23 UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID... 110 2e-23 UniRef50_Q4QPE3 Putative DNA repair radC-like protein n=5 Tax=Ha... 110 2e-23 UniRef50_A9IEU5 Putative DNA repair protein n=1 Tax=Bordetella p... 109 3e-23 UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacte... 107 8e-23 UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteoba... 107 1e-22 UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp... 107 1e-22 UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacte... 107 1e-22 UniRef50_B6J212 DNA repair protein n=1 Tax=Coxiella burnetii Cbu... 107 1e-22 UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobact... 106 2e-22 UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus je... 106 2e-22 UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiac... 106 2e-22 UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A... 106 2e-22 UniRef50_C6VI64 DNA repair protein n=3 Tax=Lactobacillus plantar... 106 3e-22 UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma pro... 106 3e-22 UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerof... 105 3e-22 UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM... 105 6e-22 UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Pep... 104 1e-21 UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 103 2e-21 UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicu... 103 2e-21 UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 102 3e-21 UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobac... 102 3e-21 UniRef50_Q3A6E7 DNA repair protein, RadC-like n=3 Tax=Desulfurom... 102 3e-21 UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacte... 101 6e-21 UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium ... 101 8e-21 UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter past... 101 9e-21 UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus Rep... 100 1e-20 UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae... 100 1e-20 UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes Re... 100 1e-20 UniRef50_C9NPT2 DNA repair protein RadC n=1 Tax=Vibrio coralliil... 100 2e-20 UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria ba... 100 2e-20 UniRef50_C0QCU0 RadC2 n=2 Tax=Desulfobacterium autotrophicum HRM... 100 2e-20 UniRef50_Q2QJL1 DNA repair protein RadC n=1 Tax=Acetobacter acet... 100 2e-20 UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonel... 100 2e-20 UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrue... 99 4e-20 UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcin... 99 4e-20 UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter ox... 99 4e-20 UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus Rep... 99 5e-20 UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus s... 99 5e-20 UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica... 99 5e-20 UniRef50_C6E4Z0 DNA repair protein RadC n=3 Tax=Geobacter RepID=... 98 9e-20 UniRef50_A9I305 DNA repair protein radC homolog n=3 Tax=Proteoba... 98 9e-20 UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcu... 98 1e-19 UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales R... 98 1e-19 UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis ex... 97 1e-19 UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadal... 97 1e-19 UniRef50_C1QC41 DNA repair protein n=2 Tax=Brachyspira RepID=C1Q... 97 1e-19 UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio ac... 97 2e-19 UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepI... 97 2e-19 UniRef50_C7VI58 DNA repair protein RadC n=3 Tax=Bacilli RepID=C7... 97 2e-19 UniRef50_C0R372 DNA repair protein RadC, putative n=11 Tax=Wolba... 97 2e-19 UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae ... 97 2e-19 UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleid... 96 3e-19 UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID... 96 3e-19 UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes Re... 96 4e-19 UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteob... 96 4e-19 UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax... 96 4e-19 UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales Re... 96 5e-19 UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium Re... 95 6e-19 UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivib... 95 6e-19 UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Delta... 95 6e-19 UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio y... 95 6e-19 UniRef50_C8N8A0 DNA repair protein RadC n=1 Tax=Cardiobacterium ... 95 7e-19 UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q... 95 8e-19 UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrional... 94 9e-19 UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacte... 94 9e-19 UniRef50_Q9LAI3 RadC (Fragment) n=2 Tax=Firmicutes RepID=Q9LAI3_... 94 1e-18 UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera ara... 94 1e-18 UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q... 94 1e-18 UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio sa... 94 1e-18 UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular orga... 94 1e-18 UniRef50_A1B298 DNA repair protein RadC n=7 Tax=Bacteria RepID=A... 94 1e-18 UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococ... 94 1e-18 UniRef50_B1I0K4 DNA repair protein radC-like protein n=1 Tax=Lys... 94 1e-18 UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium Re... 94 1e-18 UniRef50_Q4EGF4 DNA repair protein RadC n=7 Tax=Bacilli RepID=Q4... 94 2e-18 UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=... 94 2e-18 UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobac... 94 2e-18 UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales... 94 2e-18 UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales Re... 94 2e-18 UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia ... 93 2e-18 UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostri... 93 2e-18 UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21... 93 2e-18 UniRef50_C9KJC8 DNA repair protein RadC n=1 Tax=Mitsuokella mult... 93 2e-18 UniRef50_B5V5B9 RadC n=5 Tax=Firmicutes RepID=B5V5B9_BACCE 93 2e-18 UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexan... 93 2e-18 UniRef50_A8YUM9 DNA repair protein RadC n=9 Tax=Lactobacillus Re... 93 3e-18 UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcu... 93 3e-18 UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteri... 93 3e-18 UniRef50_B3JIE2 Putative uncharacterized protein n=10 Tax=Bacter... 93 3e-18 UniRef50_A0LNF4 DNA repair protein RadC n=1 Tax=Syntrophobacter ... 93 3e-18 UniRef50_Q03R16 DNA repair protein n=1 Tax=Lactobacillus brevis ... 92 4e-18 UniRef50_A8ZYJ4 DNA repair protein RadC n=1 Tax=Desulfococcus ol... 92 4e-18 UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes... 92 4e-18 UniRef50_C5D8D2 DNA repair protein RadC n=4 Tax=Firmicutes RepID... 92 4e-18 UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillu... 92 4e-18 UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium Re... 92 4e-18 UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magn... 92 5e-18 UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovib... 92 6e-18 UniRef50_C8PDJ9 DNA repair protein RadC n=1 Tax=Lactobacillus in... 92 6e-18 UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio ae... 92 7e-18 UniRef50_B4RG10 DNA repair protein RadC n=1 Tax=Phenylobacterium... 91 1e-17 UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales Re... 91 1e-17 UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonad... 91 1e-17 UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales R... 91 1e-17 UniRef50_B5CP31 Putative uncharacterized protein n=2 Tax=Clostri... 91 1e-17 UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix r... 91 1e-17 UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus la... 91 1e-17 UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepI... 91 1e-17 UniRef50_B9ECC3 Putative uncharacterized protein n=1 Tax=Macroco... 91 2e-17 UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostri... 90 2e-17 UniRef50_B0MF12 Putative uncharacterized protein n=3 Tax=Clostri... 90 2e-17 UniRef50_Q6MR78 Putative DNA repair protein n=1 Tax=Bdellovibrio... 90 3e-17 UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vade... 90 3e-17 UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=... 90 3e-17 UniRef50_C0GR82 DNA repair protein RadC n=2 Tax=Desulfonatronosp... 90 3e-17 UniRef50_C3DWR5 DNA repair protein RadC n=1 Tax=Bacillus thuring... 89 3e-17 UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin5... 89 4e-17 UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae ... 89 4e-17 UniRef50_Q0GNI5 Smu18B n=1 Tax=uncultured organism RepID=Q0GNI5_... 89 5e-17 UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillu... 89 5e-17 UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus mar... 89 5e-17 UniRef50_A1BGW3 DNA repair protein RadC n=2 Tax=Chlorobium RepID... 89 6e-17 UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridi... 89 6e-17 UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saph... 88 7e-17 UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organis... 88 8e-17 UniRef50_C0GE80 DNA repair protein RadC n=1 Tax=Dethiobacter alk... 88 9e-17 UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga o... 88 1e-16 UniRef50_Q0F0W4 DNA repair protein RadC n=1 Tax=Mariprofundus fe... 87 1e-16 UniRef50_A4ITX8 DNA repair protein RadC n=1 Tax=Geobacillus ther... 87 1e-16 UniRef50_A9BIK5 DNA repair protein RadC n=1 Tax=Petrotoga mobili... 87 1e-16 UniRef50_A9KR89 DNA repair protein RadC n=1 Tax=Clostridium phyt... 87 2e-16 UniRef50_Q2S042 UPF0758 protein SRU_2338 n=1 Tax=Salinibacter ru... 87 2e-16 UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronosp... 87 2e-16 UniRef50_Q0FHF8 DNA repair protein RadC n=1 Tax=Roseovarius sp. ... 87 2e-16 UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius t... 87 2e-16 UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon ... 87 2e-16 UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistip... 87 2e-16 UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotro... 87 2e-16 UniRef50_B6AT60 DNA repair protein RadC n=1 Tax=Rhodobacterales ... 87 2e-16 UniRef50_Q4UJX8 DNA repair protein RadC n=1 Tax=Rickettsia felis... 86 3e-16 UniRef50_B1H050 DNA repair protein RadC n=1 Tax=uncultured Termi... 86 3e-16 UniRef50_B7RA56 DNA repair protein RadC n=1 Tax=Carboxydibrachiu... 86 4e-16 UniRef50_Q1GQ77 DNA repair protein RadC n=1 Tax=Sphingopyxis ala... 86 4e-16 UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5... 86 4e-16 UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aur... 86 4e-16 UniRef50_Q93MC6 DNA repair protein RadC n=1 Tax=Clostridium perf... 85 6e-16 UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protoc... 85 6e-16 UniRef50_UPI0001C36A61 DNA repair protein RadC n=1 Tax=Clostridi... 85 7e-16 UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID... 85 8e-16 UniRef50_Q4V1K6 Possible DNA repair protein n=7 Tax=Bacillus cer... 85 8e-16 UniRef50_C4Z083 DNA repair protein RadC n=1 Tax=Eubacterium elig... 85 9e-16 UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepI... 85 9e-16 UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria Rep... 84 1e-15 UniRef50_D2QCL1 DNA repair protein RadC n=1 Tax=Spirosoma lingua... 84 1e-15 UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia Re... 84 1e-15 UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus... 84 1e-15 UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muci... 84 2e-15 UniRef50_C7GIB3 DNA repair protein RadC n=9 Tax=Bacteria RepID=C... 84 2e-15 UniRef50_Q65R62 RadC protein n=1 Tax=Mannheimia succiniciproduce... 84 2e-15 UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus ol... 83 2e-15 UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanth... 83 2e-15 UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocyto... 82 4e-15 UniRef50_A6L552 DNA repair protein n=5 Tax=Bacteroidales RepID=A... 82 4e-15 UniRef50_A6Q5Q5 DNA repair protein RadC n=2 Tax=unclassified Eps... 82 4e-15 UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachl... 82 4e-15 UniRef50_C5VLA8 DNA repair protein n=1 Tax=Prevotella melaninoge... 82 4e-15 UniRef50_A8RIH3 Putative uncharacterized protein n=2 Tax=Clostri... 82 4e-15 UniRef50_C7GE95 DNA repair protein RadC n=2 Tax=Roseburia RepID=... 82 4e-15 UniRef50_C4ZA49 DNA repair protein RadC n=1 Tax=Eubacterium rect... 82 4e-15 UniRef50_A7HJG0 DNA repair protein RadC n=3 Tax=Thermotogaceae R... 82 5e-15 UniRef50_Q1Q559 Similar to DNA repair protein RadC n=1 Tax=Candi... 82 6e-15 UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria R... 82 6e-15 UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C... 82 6e-15 UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilact... 82 7e-15 UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pac... 81 1e-14 UniRef50_B0PEI5 Putative uncharacterized protein n=1 Tax=Anaerot... 81 1e-14 UniRef50_A5EYF9 Response regulator receiver domain protein-DNA r... 81 1e-14 UniRef50_A9B8G6 DNA repair protein RadC n=1 Tax=Herpetosiphon au... 81 1e-14 UniRef50_A6EKP4 DNA repair protein n=1 Tax=Pedobacter sp. BAL39 ... 81 1e-14 UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tanne... 81 1e-14 UniRef50_A5VEU8 DNA repair protein RadC n=4 Tax=Sphingomonadales... 80 1e-14 UniRef50_C0YH45 DNA repair protein n=1 Tax=Chryseobacterium gleu... 80 2e-14 UniRef50_Q73P26 DNA repair protein RadC n=2 Tax=Treponema RepID=... 80 2e-14 UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus ... 80 2e-14 >UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriaceae RepID=YFJY_ECOLI Length = 160 Score = 230 bits (586), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 109/140 (77%), Positives = 124/140 (88%) Query: 9 IQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFT 68 ++RAL LDRHL E GVAFTST+AAR+WL L MAGLEREEF +LYLN QNQLIA ETLF Sbjct: 21 VKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFA 80 Query: 69 GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRV 128 G+I+ TEVHPREV+KRALY NAAAV+LAHNHPSG+ TPS+AD+ IT+RLVQAL LVDIRV Sbjct: 81 GSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRV 140 Query: 129 PDHLIVGGNQVFSFAEHGLL 148 PDHLIVGG Q++SFAEHGLL Sbjct: 141 PDHLIVGGRQIYSFAEHGLL 160 >UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Escherichia RepID=Q8VR59_ECOLX Length = 260 Score = 207 bits (528), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 104/117 (88%), Positives = 109/117 (93%), Gaps = 1/117 (0%) Query: 32 AAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAA 91 A R+ +L G+ R EFRVLYLNNQN+LIAGETLFTGTINRTEVHPREVIKRALYHNAA Sbjct: 145 AERDVSVLQAFGV-RMEFRVLYLNNQNKLIAGETLFTGTINRTEVHPREVIKRALYHNAA 203 Query: 92 AVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 AVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGG+QVFSFAEHGLL Sbjct: 204 AVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 260 >UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B1IPT7_ECOLC Length = 159 Score = 183 bits (464), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 86/148 (58%), Positives = 113/148 (76%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 + P ++ +++AL L+ L E G +FTS+ A R+WL L +A LEREEF L+L+NQ++L Sbjct: 12 LAPADQQTVRKALSLLECQLRETGASFTSSHAVRDWLRLQLASLEREEFTALFLDNQHRL 71 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 IA ETLFTGTIN T+VHPREV+K L HN AAV++AH+HPSGE PSKADR +T R+ QA Sbjct: 72 IAHETLFTGTINHTQVHPREVVKAGLKHNCAAVIVAHSHPSGEAEPSKADRQVTTRIQQA 131 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L LVDIR+ DHL+VGG ++ SFA+ G L Sbjct: 132 LDLVDIRLLDHLVVGGMEITSFADRGWL 159 >UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobacteriaceae RepID=C8U0Q3_ECO10 Length = 180 Score = 172 bits (435), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 84/148 (56%), Positives = 112/148 (75%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 +TP + I+RA+ LD++L +PG+AFTS+ AAR+WL L++A ERE F VLYL+NQ++L Sbjct: 33 LTPYAQRTIRRAMNLLDKYLRQPGIAFTSSTAARDWLRLHLARQEREVFMVLYLDNQHRL 92 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 + ETLF G++N +VH REV+K AL NAAAVVLAHNHPSG+ PS+ DR IT RL +A Sbjct: 93 LESETLFAGSVNHVQVHSREVVKSALRFNAAAVVLAHNHPSGDPEPSQCDRNITGRLKEA 152 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L LVD++ DHL+VG + + SFAE G L Sbjct: 153 LELVDVKTLDHLVVGRDGIVSFAERGWL 180 >UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B3HA66_ECOLX Length = 157 Score = 171 bits (434), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 83/145 (57%), Positives = 108/145 (74%) Query: 4 GERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAG 63 E+ +I+RA++ L+++ PG +F S+ A + WL L++A ERE F VLYL+NQN+L+ Sbjct: 13 SEQRVIRRAMRLLEKYQRNPGESFLSSDATKTWLQLHLARQEREMFVVLYLDNQNRLLEH 72 Query: 64 ETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGL 123 ETLF GTIN TEVHPRE++K AL HNAAAV+LAHNHPSG PS+ADRLIT +V+ L L Sbjct: 73 ETLFLGTINSTEVHPREIVKSALRHNAAAVILAHNHPSGVAEPSRADRLITTNIVKTLDL 132 Query: 124 VDIRVPDHLIVGGNQVFSFAEHGLL 148 V++RV DH I+G V SFAE G L Sbjct: 133 VNVRVLDHFIIGAGDVLSFAERGWL 157 >UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriaceae RepID=C6DAT0_PECCP Length = 157 Score = 154 bits (389), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 74/144 (51%), Positives = 102/144 (70%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E+ +IQ AL L++ + + F ++ + WL+L ++ LERE F VLYL+NQ++LI E Sbjct: 14 EQRIIQMALCLLEKRVRKNARQFKTSEDTKSWLMLELSNLEREVFMVLYLDNQHRLIEKE 73 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 + G IN TEVHPRE++K +L HNAAAV+LAHNHPSG PS+ADR IT+RL +L + Sbjct: 74 VIALGGINSTEVHPREILKASLRHNAAAVILAHNHPSGWAEPSQADRNITDRLKDSLSQL 133 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 D++V DHL+VG +V SFAE G L Sbjct: 134 DVKVLDHLVVGSTEVVSFAERGWL 157 >UniRef50_Q6TFX1 ORF25 n=3 Tax=Enterobacteriaceae RepID=Q6TFX1_ERWAM Length = 149 Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 73/121 (60%), Positives = 89/121 (73%) Query: 28 TSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALY 87 T AAR L +A RE F +LN N +IA E LF GTI+ VHPR V++RAL+ Sbjct: 29 TGADAARSLLRFRLAAEPRESFCAFFLNCHNGVIAFEELFKGTISSVTVHPRIVLQRALH 88 Query: 88 HNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGL 147 HNAAAVVLAHNHPS TPS+AD+LITERL Q LG+VD++V DHLIVGG+ ++SFAEHGL Sbjct: 89 HNAAAVVLAHNHPSANTTPSQADKLITERLAQVLGMVDVKVLDHLIVGGSDIYSFAEHGL 148 Query: 148 L 148 + Sbjct: 149 I 149 >UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y7_9BURK Length = 198 Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 71/125 (56%), Positives = 91/125 (72%) Query: 24 GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIK 83 G S + ++WL + AGLE E F VLYL+ Q LI E LF GT+ +T V+PREV+K Sbjct: 74 GPVMASPKVVKDWLSMYCAGLEHEVFLVLYLDAQQVLIEAEELFRGTLTQTSVYPREVVK 133 Query: 84 RALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFA 143 AL HNAAAV+LAHNHPSG+++PS AD L+T+ L +L +VD+RV DH IVGG++V SFA Sbjct: 134 NALAHNAAAVLLAHNHPSGQLSPSGADELLTQTLKSSLMMVDVRVLDHFIVGGDRVLSFA 193 Query: 144 EHGLL 148 E GLL Sbjct: 194 EQGLL 198 >UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia RepID=A7FEQ9_YERP3 Length = 162 Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 71/145 (48%), Positives = 99/145 (68%) Query: 4 GERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAG 63 ++ +I +AL L+ L TS A + WL L++ RE F VL+L+N+++L+A Sbjct: 16 AQQQIISQALAILEIQLRHRPYTLTSPEAVKAWLQLHLRPQGRECFMVLFLDNRHRLMAS 75 Query: 64 ETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGL 123 ET+ GT N T V+PREV+ RAL+H AAVV+AHNHP+G+ TPS+ADR +T +LV AL + Sbjct: 76 ETVSVGTFNATTVYPREVVIRALHHRCAAVVIAHNHPAGDPTPSQADRTLTAQLVNALNM 135 Query: 124 VDIRVPDHLIVGGNQVFSFAEHGLL 148 VDIRV DHLI+G ++ S AE G L Sbjct: 136 VDIRVLDHLIIGESEPVSLAELGWL 160 >UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0A3_9PROT Length = 205 Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 65/115 (56%), Positives = 86/115 (74%) Query: 34 REWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAV 93 +++L L + G ++E F VL+L+ Q++LIA E LF GT+ +T V+PREV+KRAL HNAAAV Sbjct: 91 KKYLKLLLGGRQQEVFVVLFLDTQHRLIAAEELFHGTLTQTSVYPREVVKRALMHNAAAV 150 Query: 94 VLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +LAHNHPSG PS+AD+L+T L QAL LVD+R DH I+G SFAE GL+ Sbjct: 151 LLAHNHPSGLAEPSQADQLLTNALKQALALVDVRALDHFIIGDESALSFAERGLI 205 >UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8Q3_9BURK Length = 239 Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 73/152 (48%), Positives = 103/152 (67%), Gaps = 5/152 (3%) Query: 1 MTPGERS----LIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNN 56 + P +R+ +++ A + + + L E V F +A + +L L++A E F VL+L++ Sbjct: 89 LGPAKRAEIVAVLELARRAMAQRLQEREV-FADPQAVKHYLQLHLAAKGHEVFAVLFLDS 147 Query: 57 QNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITER 116 QN+L+A E LF GT+ +T V+PREV+ RAL+H AAAVVLAHNHPSG V PS+AD +T+ Sbjct: 148 QNKLLAMEELFRGTLTQTSVYPREVVIRALHHGAAAVVLAHNHPSGSVQPSRADEALTQT 207 Query: 117 LVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L AL LVD+RV DH+IVG Q S AE GL+ Sbjct: 208 LKAALALVDVRVLDHIIVGPGQALSMAETGLI 239 >UniRef50_D2NHT0 Putative phage DNA repair protein n=1 Tax=Escherichia coli SE15 RepID=D2NHT0_ECOLX Length = 156 Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 68/147 (46%), Positives = 96/147 (65%), Gaps = 1/147 (0%) Query: 2 TPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLI 61 T E ++ +A + R+ ++ GV S R +++ +A LE EEF ++ L+NQNQL+ Sbjct: 11 TQRETRILDQARDIISRY-YQRGVQLCSPDDVRRCVMVELAPLEHEEFGIILLDNQNQLL 69 Query: 62 AGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQAL 121 E LF GT+N VHPREVIKR L HNAAAV+L HNHPSGE PS+ D +T++L + L Sbjct: 70 HREILFRGTLNSVSVHPREVIKRVLKHNAAAVILVHNHPSGEPEPSRCDIQLTKKLQELL 129 Query: 122 GLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++D+R+ DH IV G + S AE GL+ Sbjct: 130 EILDVRLLDHFIVAGTETVSMAERGLV 156 >UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97_BURM1 Length = 169 Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 68/141 (48%), Positives = 95/141 (67%), Gaps = 1/141 (0%) Query: 8 LIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLF 67 +++ A + +D+ + G FTS A +++L +AG E E F VL+L+ +++LI +F Sbjct: 30 ILEAARQVIDQKMQR-GDEFTSPAAVKDYLRAKLAGFEHEVFAVLFLDTRHRLIDYAEMF 88 Query: 68 TGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIR 127 GTI+ EVHPREV+K AL NAAAV+++HNHPSG PS ADR +T +L QAL LVD+R Sbjct: 89 RGTIDSAEVHPREVVKEALRLNAAAVIISHNHPSGNPEPSAADRAMTSQLRQALALVDVR 148 Query: 128 VPDHLIVGGNQVFSFAEHGLL 148 DH+IV G SFAE GL+ Sbjct: 149 TLDHIIVAGGTTTSFAERGLI 169 >UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria RepID=A6SWN0_JANMA Length = 190 Score = 134 bits (338), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 64/148 (43%), Positives = 102/148 (68%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 +T + ++ RA++ LD H+ + G TS + +++L L + +RE F V++++ Q+++ Sbjct: 42 LTAVDTWIVHRAIEILDEHVIKHGPKLTSPKDVKDYLRLQLLNEKREVFAVVFMDTQHRV 101 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 +A E LF GTI++T V+PR +++RA+ NAA+++LAHNHPSG PS+AD+ +T RL Sbjct: 102 LAYEPLFFGTIHQTSVYPRAIVQRAMSLNAASMILAHNHPSGSTHPSEADKQLTNRLKSL 161 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L +D+RV DH I+G FSFAEHGLL Sbjct: 162 LESIDVRVLDHFIIGEEGTFSFAEHGLL 189 >UniRef50_A1TJG0 DNA repair protein RadC n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TJG0_ACIAC Length = 167 Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 69/148 (46%), Positives = 98/148 (66%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 +T E L+ RAL L++ + A ++ R ++L L +AG E F V++L+ QN+ Sbjct: 20 LTVQESRLVHRALHVLEQRMFHREAAISTPRELYDYLRLKLAGELHEVFGVVFLDCQNRA 79 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 IA E LF GTIN+ V+PR ++KRA+ NA++V+L HNHPSG S ADR +TER+ + Sbjct: 80 IAFEALFRGTINQAVVYPRVIVKRAMDLNASSVILVHNHPSGTSQCSDADRGLTERICAS 139 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 LGL+D+RV DH+IVG +SFAE GLL Sbjct: 140 LGLIDVRVVDHVIVGSGTPYSFAEAGLL 167 >UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacteria RepID=Y2732_RALEJ Length = 228 Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 64/120 (53%), Positives = 87/120 (72%) Query: 29 STRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYH 88 S A R +L L +A L +E F L+L+ +N++IA E LF GT+N+T V+PREV +RAL H Sbjct: 105 SPAAVRSYLRLTLAPLAQEVFVCLFLDTRNRMIASEELFRGTLNQTAVYPREVARRALAH 164 Query: 89 NAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 NAA+V++AHNHPSG TPS++D +T L +AL L+D+R+ DH +V G V SFAEHG L Sbjct: 165 NAASVIVAHNHPSGCCTPSQSDLQMTRMLARALDLIDVRLLDHFVVAGTHVHSFAEHGEL 224 >UniRef50_C4SWK5 DNA repair protein n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4SWK5_YERIN Length = 152 Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 65/125 (52%), Positives = 87/125 (69%) Query: 24 GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIK 83 G ST A RE+L +A LE E F VL L+NQ++++A E LF GT+N ++PRE++K Sbjct: 28 GDKMFSTEAVREYLKFKLAPLEHEVFSVLLLDNQHRILAYEELFRGTLNAVSIYPREIVK 87 Query: 84 RALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFA 143 +L +NA A++L HNHPSGE PS AD+ IT +L LGL+D++V DHLIV G QV S A Sbjct: 88 LSLRYNAGAIILVHNHPSGEPEPSHADKEITNKLKSVLGLLDVQVLDHLIVAGTQVVSLA 147 Query: 144 EHGLL 148 E GL+ Sbjct: 148 ERGLV 152 >UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAN5_HAHCH Length = 183 Score = 132 bits (331), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 69/145 (47%), Positives = 96/145 (66%), Gaps = 8/145 (5%) Query: 4 GERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAG 63 +R+L QR K H+ +PG +E+L++++A RE F L+L+ QN+LIA Sbjct: 35 AKRALAQR-FKRHSCHMDDPG-------KVKEYLMMHLAPEPRETFVGLFLDTQNRLIAY 86 Query: 64 ETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGL 123 E LF G I+ ++PREV+K AL HNAA V++AHNHPSG+ PS D+LIT RL+QAL L Sbjct: 87 EVLFRGAIDEAHIYPREVVKAALRHNAAKVIVAHNHPSGDPKPSVNDQLITYRLLQALML 146 Query: 124 VDIRVPDHLIVGGNQVFSFAEHGLL 148 V+I + DH +VGG+QV S A G+ Sbjct: 147 VEIPLIDHFVVGGDQVVSMAAQGIF 171 >UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellaceae RepID=Y009_HAES2 Length = 222 Score = 131 bits (330), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 64/120 (53%), Positives = 83/120 (69%) Query: 27 FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 FTS R +L + +RE F VL+L+NQ++LI E +F GTIN+ V+PRE+IK AL Sbjct: 101 FTSPDTVRMYLQTELENKDREIFMVLFLDNQHRLIKKEEMFLGTINQANVYPREIIKTAL 160 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 + NAAA++LAHNHPSG TPS ADR +TE + Q L++IRV DH I+G FSFAE G Sbjct: 161 FCNAAALILAHNHPSGVSTPSMADRKMTENIKQLSELMEIRVLDHFIIGKGNYFSFAEQG 220 >UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepID=Y4094_ENTS8 Length = 230 Score = 131 bits (330), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 61/123 (49%), Positives = 89/123 (72%) Query: 26 AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRA 85 A S R++L +A ERE F V++L++QN++I TLFTGT++ EVHPRE+++ A Sbjct: 108 ALLSPTITRDFLESQLAEQEREVFLVIFLDSQNRIIRQNTLFTGTLSHVEVHPREIVREA 167 Query: 86 LYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEH 145 + NAA ++LAHNHPSG PS+AD+++TER+V++ LVDIRV DHL++G + SFAE Sbjct: 168 VRLNAAGIILAHNHPSGRAEPSRADKMVTERIVKSCQLVDIRVLDHLVIGRGEYVSFAER 227 Query: 146 GLL 148 G + Sbjct: 228 GWI 230 >UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SDF8_CHRVI Length = 167 Score = 131 bits (329), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 67/144 (46%), Positives = 94/144 (65%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 ER+L+ A+ L+RH A TS A R++L L + GL E F VL L+N+++++ + Sbjct: 24 ERTLVAEAIDCLERHYRVAQEALTSPDATRDYLKLRLYGLTYEVFAVLLLDNRHRVLRYQ 83 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GTI+ VHPREV++ + AAAV+ AHNHPSG PS+ADR +T +L AL L+ Sbjct: 84 ELFRGTIDTAYVHPREVVRLVIESGAAAVIFAHNHPSGSSDPSQADRTLTRKLQDALALI 143 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 ++RV DH+IVG + SFAE G L Sbjct: 144 EVRVLDHIIVGEGRGMSFAEQGWL 167 >UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria RepID=Y1786_VIBCH Length = 158 Score = 131 bits (329), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 69/125 (55%), Positives = 87/125 (69%), Gaps = 1/125 (0%) Query: 24 GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIK 83 G F T E+L +AG E E F VL+L+NQ++LI + LF GT++ V+PREV+K Sbjct: 35 GETFARTENTTEYLRCKLAGYEHEIFAVLFLDNQHRLIEFKELFRGTVDAASVYPREVLK 94 Query: 84 RALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFA 143 AL NAAAV+ AHNHPSG+ PS+ADR IT+RL AL LVDIRV DH++VG + V SFA Sbjct: 95 EALNVNAAAVIFAHNHPSGDPEPSQADRRITQRLKDALSLVDIRVLDHVVVGKSSV-SFA 153 Query: 144 EHGLL 148 E G L Sbjct: 154 ERGWL 158 >UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria RepID=Y3944_XANC8 Length = 225 Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 68/149 (45%), Positives = 95/149 (63%), Gaps = 3/149 (2%) Query: 1 MTPGERSLIQRALKTLDRHLH---EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + AL+ +RHL E G A + + + + E F L+L+++ Sbjct: 74 LGPASACKLSAALELANRHLLSDLERGEALSDPSSVGRYFSQRLRARNYEVFAALFLDSR 133 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++ IA E LFTGTI+ E+HPREV++RAL HNAAAVV+ HNHPSG PS+ADR +T+RL Sbjct: 134 HRAIAFEELFTGTIDAAEIHPREVVRRALLHNAAAVVVGHNHPSGNPEPSEADRAVTQRL 193 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 +QALGLVDIR+ DH ++G + S AE G Sbjct: 194 LQALGLVDIRLLDHFVIGDGRPVSLAERG 222 >UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax=Gammaproteobacteria RepID=Q47ZW8_COLP3 Length = 158 Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 65/123 (52%), Positives = 90/123 (73%), Gaps = 1/123 (0%) Query: 26 AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRA 85 AFTS++A +++L +A E E F V+ L+NQ+Q+I LF GTI+ + V+PREV+K Sbjct: 37 AFTSSQATKDFLRFKLANKEHEIFAVMLLDNQHQMIDFVELFRGTIDASAVYPREVVKTV 96 Query: 86 LYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEH 145 L NAAAV+L HNHPSG +PS AD+ IT+RL +AL L+D+RV DH+I+G +SFAE+ Sbjct: 97 LLENAAAVILTHNHPSGLNSPSIADKDITKRLQEALALIDVRVLDHIIIGEG-TYSFAEN 155 Query: 146 GLL 148 GLL Sbjct: 156 GLL 158 >UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobacteria RepID=Y510_VIBCH Length = 157 Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 67/125 (53%), Positives = 85/125 (68%), Gaps = 1/125 (0%) Query: 24 GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIK 83 G A T+ A +E++ + ERE F +L L+NQN+LI + LF GT++ V+PREV+K Sbjct: 34 GDALTNPDATKEYVRCKLGSYEREVFALLLLDNQNRLIEFKELFQGTVDAASVYPREVVK 93 Query: 84 RALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFA 143 L NAAAV+ AHNHPSG+ TPS+ADR ITERL L LVD+RV DH IV G+ SFA Sbjct: 94 AVLEVNAAAVIFAHNHPSGDSTPSQADRRITERLKDTLALVDVRVLDH-IVTGDTCTSFA 152 Query: 144 EHGLL 148 E G L Sbjct: 153 ERGWL 157 >UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriaceae RepID=YICR_SALA4 Length = 221 Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 61/121 (50%), Positives = 85/121 (70%) Query: 26 AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRA 85 A S RE+L + G ERE F V++L+ Q++++ LF+GT+N EVHPRE+++ A Sbjct: 99 ALLSPEMTREFLQSQLTGEEREIFLVIFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREA 158 Query: 86 LYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEH 145 + NA+AV+LAHNHPSG PSKAD+LITER+++ +DIRV DHLI+G + SFAE Sbjct: 159 IKLNASAVILAHNHPSGCAEPSKADKLITERVIKCCQFMDIRVLDHLIIGRGEYVSFAER 218 Query: 146 G 146 G Sbjct: 219 G 219 >UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax=uncultured archaeon RepID=D1JB12_9ARCH Length = 330 Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 64/142 (45%), Positives = 95/142 (66%), Gaps = 4/142 (2%) Query: 11 RALKTL-DRHLHEPGVAFTSTRAARE---WLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 +A++ L + +L E + + R ++E +L L M L+ E F+V++L++ NQ I E L Sbjct: 170 KAVQALAEEYLKESMKSVSKVRNSKEVFDYLYLTMRDLKIEIFKVIFLDSANQTIDDENL 229 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 F GT+N + V+PRE++K A+ NAA+++ HNHPSG+ TPS +DR ITE L+ A LV I Sbjct: 230 FEGTLNASSVYPREIVKSAVNKNAASLIFVHNHPSGDPTPSGSDRAITEDLIYACNLVQI 289 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 V DH+I+G N FSFA+ GLL Sbjct: 290 TVLDHIIIGDNVYFSFADEGLL 311 >UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular organisms RepID=Y3252_RHOFD Length = 234 Score = 127 bits (320), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 62/122 (50%), Positives = 86/122 (70%) Query: 27 FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 F + A + +L L++A E F VL+L+ QN+L+A E LF GT+ +T V+PREV+ RAL Sbjct: 113 FATPDAVKHYLQLHLAAKPHEVFAVLFLDVQNRLLALEELFRGTLTQTSVYPREVVLRAL 172 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 +H A++VVLAHNHPSG V PS+AD ++T+ L L L+D+RV DH+IV + S AE G Sbjct: 173 HHQASSVVLAHNHPSGTVQPSRADEMLTQTLKTTLALIDVRVLDHVIVAPGEALSMAERG 232 Query: 147 LL 148 LL Sbjct: 233 LL 234 >UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria RepID=Q0AJV4_NITEC Length = 167 Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 61/141 (43%), Positives = 91/141 (64%) Query: 8 LIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLF 67 +IQ+A+ L+ + + G +A R++L L + E F ++LN+Q+Q++A E LF Sbjct: 26 IIQQAIALLEHRVFKAGPTLDGPKAVRDYLRLKLMAEPNEVFVAVFLNSQHQVLACECLF 85 Query: 68 TGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIR 127 GT++ V+PR V++RAL NA+A++ +H HPSG PS ADR IT RL L ++DIR Sbjct: 86 KGTVSEASVYPRVVVQRALELNASALIFSHQHPSGVAEPSMADRAITNRLKFILSMIDIR 145 Query: 128 VPDHLIVGGNQVFSFAEHGLL 148 V DH I+G + +SFAE GLL Sbjct: 146 VVDHFIIGKGEPYSFAESGLL 166 >UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaproteobacteria RepID=Y7200_HAEIE Length = 221 Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 62/113 (54%), Positives = 84/113 (74%) Query: 36 WLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVL 95 +L+ + ERE F VL+L+NQ++LI E LF GTIN + V+PRE+IK ALY NAAA++L Sbjct: 109 FLLTELQHEEREVFMVLFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALIL 168 Query: 96 AHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 AHNHPSG PS +D+LIT+++ A L++I V DHLIVG + +SFAE+ LL Sbjct: 169 AHNHPSGVTEPSYSDQLITKKIQDAAELMEICVLDHLIVGKSDCYSFAENCLL 221 >UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacteria RepID=Q5E054_VIBF1 Length = 157 Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 65/125 (52%), Positives = 88/125 (70%), Gaps = 1/125 (0%) Query: 24 GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIK 83 G AF++ A + +L + ERE F VL L+NQ++LI + LF GT++ V+PREV+K Sbjct: 34 GDAFSNPTATQNYLRYKLGHYEREVFAVLLLDNQHRLIEFKELFQGTVDAASVYPREVVK 93 Query: 84 RALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFA 143 L NAAAV+ AHNHPSGE TPS+AD+ IT RL +AL L+D++V DH++VG V SFA Sbjct: 94 AVLEVNAAAVIFAHNHPSGESTPSQADKRITTRLKEALALIDVQVLDHIVVGETCV-SFA 152 Query: 144 EHGLL 148 E GL+ Sbjct: 153 ERGLI 157 >UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Haemophilus ducreyi RepID=Q7VMM9_HAEDU Length = 157 Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 56/123 (45%), Positives = 83/123 (67%) Query: 26 AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRA 85 +F + A E+ + + ERE F VL+ + QN+LI E LF GTIN+ +HPRE++K+A Sbjct: 35 SFGDEKEASEYCQMQLGFEEREVFGVLFWDTQNRLIRFEKLFFGTINQASIHPREIVKKA 94 Query: 86 LYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEH 145 L N++AV+L HNHPSG+VTPS++D+ T ++ QA L+D+ V DH+IV +SF H Sbjct: 95 LELNSSAVILTHNHPSGQVTPSQSDKQTTAKIKQACQLIDVNVLDHIIVSATDTYSFCMH 154 Query: 146 GLL 148 L+ Sbjct: 155 QLM 157 >UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S8K4_HAHCH Length = 207 Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 61/126 (48%), Positives = 87/126 (69%), Gaps = 1/126 (0%) Query: 24 GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIK 83 G AF A + +L+L +A E+E F ++L+NQN+LI+ E LF GTI++ V+PRE++K Sbjct: 80 GKAFCDPDATKYYLVLQLAEHEQEVFACMFLDNQNRLISFEKLFYGTIDQASVYPREIVK 139 Query: 84 RALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGN-QVFSF 142 RAL NAAAV+LAHNHPSG PS AD +T+ + +L L+D+RV DH++VG + SF Sbjct: 140 RALMLNAAAVILAHNHPSGMSEPSVADIAMTKTVKSSLALIDVRVLDHIVVGSDGSSVSF 199 Query: 143 AEHGLL 148 E G + Sbjct: 200 IERGYM 205 >UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteria RepID=Y399_STRMK Length = 234 Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 63/113 (55%), Positives = 82/113 (72%) Query: 36 WLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVL 95 +L + G RE F L+L+N+++LIA E LF GTIN V+PREV++RAL HNAAAV+L Sbjct: 113 YLQHRLRGQAREVFMALFLDNRHRLIACEELFHGTINAAPVYPREVVRRALLHNAAAVIL 172 Query: 96 AHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +HNHPSG+ PS AD IT+ L QAL +VD+R+ DH +VG + SFAE GLL Sbjct: 173 SHNHPSGDPEPSSADTRITDELQQALAMVDVRLLDHFVVGEGRPVSFAERGLL 225 >UniRef50_B0RXB0 DNA repair protein radC homolog n=3 Tax=Xanthomonas campestris pv. campestris str. B100 RepID=B0RXB0_XANCB Length = 159 Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 63/118 (53%), Positives = 83/118 (70%) Query: 29 STRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYH 88 S A +L+ A L E F V++L+NQ+ ++A E LF+GTI+ E+HPR V KRAL Sbjct: 40 SPDQAGSYLVARCAHLSHEIFGVVFLDNQHHILAAEHLFSGTIDGCEIHPRVVAKRALEL 99 Query: 89 NAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 NAAAV+L HNHPSG PS+ADR +T+RL +ALGL+DIRV DHL++GG + S A G Sbjct: 100 NAAAVILFHNHPSGNPEPSEADRKVTQRLQEALGLLDIRVLDHLVIGGQKSVSLAARG 157 >UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria RepID=Q0ACW7_NITEC Length = 173 Score = 125 bits (314), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 60/123 (48%), Positives = 83/123 (67%) Query: 26 AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRA 85 A T A ++ + G E E F +++LN+Q +LIA +F GT+ V+PREV+K A Sbjct: 51 AMTKPEIAADYFKNKLNGFEHEVFSIIFLNSQYRLIAYREMFQGTLTCASVYPREVVKAA 110 Query: 86 LYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEH 145 + +NAAAV+LAH HPS E PS+AD+ IT+RL +AL L+D+ V DH+IVGGN S AE Sbjct: 111 ISYNAAAVILAHCHPSKETEPSQADKAITKRLKEALDLIDVCVLDHIIVGGNTTKSMAEM 170 Query: 146 GLL 148 GL+ Sbjct: 171 GLV 173 >UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacteria RepID=Q3JDF2_NITOC Length = 171 Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 69/146 (47%), Positives = 93/146 (63%), Gaps = 1/146 (0%) Query: 3 PGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIA 62 P ++SL++ A L LH+PGV S R++L + +A + E F LYL+N++++I Sbjct: 27 PEKQSLLELAFAVL-HDLHQPGVELPSPNHTRDFLRMLLAERKAEVFGCLYLDNRHRVIE 85 Query: 63 GETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALG 122 LF GTI+ V+PR V+++AL NAAAV+ HNHPSG PS AD IT RL +AL Sbjct: 86 TVELFQGTIDGASVYPRVVVQQALSVNAAAVMFFHNHPSGVAEPSNADEAITRRLKEALA 145 Query: 123 LVDIRVPDHLIVGGNQVFSFAEHGLL 148 LVDIRV DH +V + SFAE GLL Sbjct: 146 LVDIRVLDHFVVTAGESISFAERGLL 171 >UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiaceae RepID=Y2712_RALPJ Length = 224 Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 63/149 (42%), Positives = 94/149 (63%), Gaps = 3/149 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 M P + + + L+ R L E G F S ++ +++L L + E F +L+ + Sbjct: 74 MGPAKYAQLHALLEVARRALKEDFTQGQTFESAQSVKDFLRLTLGHRPHEVFACFFLDVR 133 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++LIA E LF GT+ V+PRE+ KRAL+HNAAAV+LAHNHP+G PS++D ++T L Sbjct: 134 HRLIAWEELFRGTLTEARVYPREIAKRALHHNAAAVILAHNHPTGNTEPSESDVILTREL 193 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 +AL ++D+ V DH+IVG N V+ F EHG Sbjct: 194 CRALAMLDVIVLDHMIVGRNHVYGFLEHG 222 >UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomonas RepID=Q3BQ28_XANC5 Length = 187 Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 69/142 (48%), Positives = 92/142 (64%), Gaps = 1/142 (0%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E ++ A L++ L G + +A ++LI A L E F V++L+ ++Q++A E Sbjct: 45 EEGILLAAATILEQRLQRQGKIHSPDQAG-DYLISRCAHLPHEVFGVVFLDIKHQILATE 103 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GTI+ EVHPR V KRAL NAAAV+L HNHPSG PS+ADR +TERL +AL L+ Sbjct: 104 HLFFGTIDGCEVHPRVVAKRALDLNAAAVILFHNHPSGNPEPSEADRKVTERLQKALSLL 163 Query: 125 DIRVPDHLIVGGNQVFSFAEHG 146 DIRV DHL++GG Q S A G Sbjct: 164 DIRVLDHLVIGGRQHISLAARG 185 >UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae RepID=C4LDH2_TOLAT Length = 165 Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/125 (48%), Positives = 82/125 (65%) Query: 24 GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIK 83 G + +A +L M E E F L+L+NQ+++I E LF GT+N T +HPREV+K Sbjct: 41 GCSIERPSSAFIYLQALMGNYENEVFGSLFLDNQHRIICFEELFRGTLNVTNIHPREVVK 100 Query: 84 RALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFA 143 RAL NAAAV+ HNHPSGE PS+AD+ IT +L + L L+D+RV DH++VG S A Sbjct: 101 RALAVNAAAVIFVHNHPSGEPEPSEADKKITVQLRETLNLIDVRVLDHIVVGAKACISMA 160 Query: 144 EHGLL 148 E GL+ Sbjct: 161 ERGLV 165 >UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUN7_AERS4 Length = 296 Score = 121 bits (304), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 69/141 (48%), Positives = 85/141 (60%), Gaps = 8/141 (5%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 S+I R LD + S E+L A LE E F ++ L+NQ+++I L Sbjct: 30 SIIARRFTRLD--------SLNSPEMVVEYLKTRFATLEHETFAMILLDNQHRVINAVDL 81 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 GTI+ V+PREV+K AL HNAAAV+LAHNHPSG PS+ADR ITERL AL LVDI Sbjct: 82 SHGTIDSAAVYPREVVKTALKHNAAAVILAHNHPSGVAEPSRADRQITERLQAALDLVDI 141 Query: 127 RVPDHLIVGGNQVFSFAEHGL 147 RV DH++V G SFA G Sbjct: 142 RVLDHIVVAGENSMSFAVRGF 162 >UniRef50_C3WF45 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WF45_FUSMR Length = 154 Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 55/114 (48%), Positives = 84/114 (73%) Query: 35 EWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVV 94 E+L +N++ EEF++L+LNN N+LIA +TLF GTI+++ V+PR V++ L +N+A V+ Sbjct: 41 EFLKINLSPRNNEEFKILFLNNANKLIAEKTLFYGTIDKSAVYPRVVLEEVLRYNSAGVI 100 Query: 95 LAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 LAHNHPSG + PSK D +TE L + L +++ V DH+I+G ++ FSF E GL+ Sbjct: 101 LAHNHPSGNLRPSKQDIQLTEALQELLEKINVMVLDHMIIGDDEYFSFREEGLI 154 >UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobacteria RepID=Y056_PSYIN Length = 225 Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 91/143 (63%), Gaps = 3/143 (2%) Query: 9 IQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGET 65 +Q L+ R+L EP G A TS + +LI M L E F + L+ Q+++I Sbjct: 83 LQAVLEMSSRYLQEPLSKGNALTSAAQTKAFLIAKMHNLPYEVFAAILLDTQHRIIRFHE 142 Query: 66 LFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVD 125 F G+I+ VHPR + ++ L NAAA++L HNHPSG+ + S+AD++IT+++V AL L+D Sbjct: 143 FFFGSIDCATVHPRIIAQKVLSENAAAIILVHNHPSGDPSASEADKMITQKIVSALQLID 202 Query: 126 IRVPDHLIVGGNQVFSFAEHGLL 148 +RV DHL+VG + SFAE+G + Sbjct: 203 VRVLDHLVVGHKKCTSFAENGWI 225 >UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacteriaceae RepID=Y101_ENT38 Length = 221 Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 54/120 (45%), Positives = 82/120 (68%) Query: 29 STRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYH 88 S +++L ++ ERE F V++L+NQ++++ +F+GT+ EVHPRE+++ A+ Sbjct: 102 SPEMTKDFLQSQLSDAEREVFMVIFLDNQHRVVKHSRMFSGTLRHVEVHPREIVREAIKV 161 Query: 89 NAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 NAAAV+LAHNHPSG PSKAD+ ITER+++ +DI V DH I+G + SFAE G + Sbjct: 162 NAAAVILAHNHPSGCAEPSKADKDITERIIKCCQFMDIHVLDHFIIGRGEYVSFAEQGWI 221 >UniRef50_B1HKP9 DNA repair protein n=1 Tax=Burkholderia pseudomallei S13 RepID=B1HKP9_BURPS Length = 165 Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 63/148 (42%), Positives = 93/148 (62%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 +T E LI A+ L+R L + G A TS + A ++L L M +RE F V++L+ +++ Sbjct: 18 LTSAEHQLIHDAIAVLERRLFQRGPALTSPQNAIDYLRLTMTREDREVFTVIFLDTHHRV 77 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 IA E LF G I+ + R ++ RA+ N+ A+++AHNHPSGE PS AD+ +T L Sbjct: 78 IAVEPLFYGGIDGAHISSRVILHRAILLNSTAIIVAHNHPSGETQPSPADQRLTAELAAL 137 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L LVD+R+ DH I+G + FSFA+ GLL Sbjct: 138 LRLVDMRLLDHFIIGRGEPFSFAQAGLL 165 >UniRef50_B1JAY7 DNA repair protein RadC n=4 Tax=Pseudomonas RepID=B1JAY7_PSEPW Length = 164 Score = 117 bits (294), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 65/145 (44%), Positives = 95/145 (65%), Gaps = 2/145 (1%) Query: 5 ERSLIQRALKTLD-RHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAG 63 E +LI AL+ LD RH V T AA +L L +A E F +L L++++++++ Sbjct: 21 EDALITGALQLLDQRHFQRGEVLITPADAA-AYLKLQLAPYHHEVFALLCLDSRHRVLSF 79 Query: 64 ETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGL 123 + LFTG+I+ V+PR+V+ +AL NAAAV+ +HNHPSG PS ADR++T RL +AL L Sbjct: 80 DILFTGSIDGASVYPRQVVIKALERNAAAVIFSHNHPSGCSEPSGADRVLTTRLTEALAL 139 Query: 124 VDIRVPDHLIVGGNQVFSFAEHGLL 148 V++RV DH+IVG S AE+G + Sbjct: 140 VEVRVLDHIIVGEGTPLSLAEYGWM 164 >UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AWS8_STRM9 Length = 211 Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 46/112 (41%), Positives = 76/112 (67%) Query: 35 EWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVV 94 ++L +ERE F+VLY N +N LI E +F GTI+++ V+ RE++K L +NA +++ Sbjct: 98 KYLKFQYVDMEREVFKVLYFNTKNVLIKDENIFYGTIDKSVVYVREIVKNILKYNAKSII 157 Query: 95 LAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 + HNHPSG + PS DR +T++++ L L+D+R+ DH+I+ +SF E+G Sbjct: 158 IVHNHPSGNLEPSNDDRCLTKKIIDVLKLIDVRLSDHIIISNKGYYSFLENG 209 >UniRef50_Q47CZ3 DNA repair protein RadC n=2 Tax=Dechloromonas aromatica RCB RepID=Q47CZ3_DECAR Length = 193 Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 73/143 (51%), Positives = 99/143 (69%), Gaps = 4/143 (2%) Query: 6 RSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGET 65 R L+ R L+ ++ P +A S + R+WL L+ AGL+ E F V+YL+ ++LI E Sbjct: 55 RELLLRDLR--EQMCDSPVMA--SPQVLRDWLRLHCAGLQHEVFLVIYLDAHHRLIEAEE 110 Query: 66 LFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVD 125 LF GT+ +T V+PREV+K AL NAAA+ LAHNHPSGE PS+AD L+T+ L AL LVD Sbjct: 111 LFRGTLTQTSVYPREVVKGALTRNAAALALAHNHPSGEAEPSRADELLTQTLKSALSLVD 170 Query: 126 IRVPDHLIVGGNQVFSFAEHGLL 148 +R+ DH IV G++V SFAE GL+ Sbjct: 171 VRIIDHFIVAGDKVVSFAELGLI 193 >UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacteria RepID=B0T9R6_CAUSK Length = 253 Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/127 (49%), Positives = 86/127 (67%), Gaps = 1/127 (0%) Query: 23 PGVAFTSTRAAR-EWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREV 81 PG S+ A ++L L MA ERE FRVL+L+ +NQLIA E L GT++ V+PREV Sbjct: 127 PGRCVVSSWTALIDYLKLTMAHCEREAFRVLFLDKKNQLIADEILNHGTVDHAPVYPREV 186 Query: 82 IKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFS 141 ++RAL +A+AV+L HNHPSG+ TPS AD +T+++V A + I V DH+IVG +V S Sbjct: 187 VRRALEVSASAVILVHNHPSGDQTPSSADIEMTKKVVDAARTLGIAVHDHVIVGRAEVAS 246 Query: 142 FAEHGLL 148 F GL+ Sbjct: 247 FKALGLI 253 >UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KQ45_9GAMM Length = 177 Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/148 (45%), Positives = 92/148 (62%), Gaps = 3/148 (2%) Query: 2 TPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREE-FRVLYLNNQNQL 60 TP ++ +I++AL L+ L A TS R++ L + G ER+E F L+L Q+ Sbjct: 32 TPAQQRIIEKALALLESRLINSD-ALTSPVRVRQYCQLQL-GHERDEHFACLFLTAQHHA 89 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 I+ E F G+I+ V+PR +++R L NAAAV+L HNHPSG PS ADR IT RL +A Sbjct: 90 ISFEIQFRGSIDGAAVYPRVIVRRCLELNAAAVILVHNHPSGVSEPSPADRQITVRLQRA 149 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L L+D+RV DHLIV SFA+ GLL Sbjct: 150 LELIDVRVVDHLIVSAGDATSFAQAGLL 177 >UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepID=Q1RK76_RICBR Length = 249 Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 92/143 (64%), Gaps = 4/143 (2%) Query: 6 RSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGET 65 R LI RALK + +++ +A S + ++L +NM + E+FRVL+LN +N LIA E Sbjct: 111 RELINRALKQ--KIINKNIIA--SWGSLIDYLKVNMGNMRLEQFRVLFLNKKNILIADEV 166 Query: 66 LFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVD 125 L GTI++ V+PRE+IKRAL++ A+ ++L HNHPSG PSKA +T +V ++ Sbjct: 167 LSQGTIDQAAVYPREIIKRALFNEASNIILVHNHPSGSPDPSKAGIDMTNIIVDMCKTIN 226 Query: 126 IRVPDHLIVGGNQVFSFAEHGLL 148 I V DH+I+ N+ FSF + LL Sbjct: 227 IIVHDHVIISNNKYFSFKSNMLL 249 >UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0FF1E Length = 213 Score = 114 bits (286), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 55/120 (45%), Positives = 79/120 (65%) Query: 29 STRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYH 88 S ++ + I + +E F V LNNQ++ + + LF+GTIN V+PRE++K AL + Sbjct: 93 SVDESKAFFISQLQYYPQERFAVALLNNQHEFLHYKELFSGTINAASVYPREIVKYALDY 152 Query: 89 NAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 NAA V+LAHNHPSG PS+AD IT+R+ QAL L+D++V DH++VG S A+ G L Sbjct: 153 NAANVILAHNHPSGTPEPSQADIAITQRIRQALDLIDVQVLDHIVVGAGNAVSLAQRGCL 212 >UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. DG881 RepID=B4X5D3_9GAMM Length = 164 Score = 114 bits (286), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 56/123 (45%), Positives = 83/123 (67%) Query: 26 AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRA 85 A T+ ++L + +A + E F ++LNN++++++ E LF+GTI+ V+PR V+++A Sbjct: 42 ALTAPTDVAQFLQMALAQEKNEVFAAIFLNNKHKVLSFEPLFSGTIDGAAVYPRVVVQQA 101 Query: 86 LYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEH 145 L NAAAV+ AHNHPSG PS+ADR IT RL AL L+D+RV DH +V ++ S AE Sbjct: 102 LACNAAAVIFAHNHPSGCCEPSQADRTITTRLKDALALIDVRVLDHFVVSRSEWVSLAER 161 Query: 146 GLL 148 G L Sbjct: 162 GWL 164 >UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSS5_SYNAS Length = 308 Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 54/108 (50%), Positives = 76/108 (70%) Query: 41 MAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHP 100 + GL+ E F VLYL+ QN++IA ET+ G +N+ V+PR+VI+RAL H ++A++L HNHP Sbjct: 199 LGGLKDENFCVLYLDTQNRIIAFETIQKGIVNQAVVYPRQVIERALSHKSSALILVHNHP 258 Query: 101 SGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 SG V PS AD +T + L+DI V DHLI+G N+ FSF E G++ Sbjct: 259 SGFVKPSDADIRLTRTITDTAKLLDIMVHDHLIIGENRFFSFREEGIM 306 >UniRef50_B8KU95 DNA repair protein RadC n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KU95_9GAMM Length = 223 Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 58/120 (48%), Positives = 75/120 (62%) Query: 27 FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 S R +L + RE F LYL+++N+LI E LF GTI+ V PREV++ AL Sbjct: 102 IASAVECRRFLQRRLGKQRREVFSALYLDSRNRLIVAEDLFAGTIDGAAVFPREVVRGAL 161 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 H+AA+V++AHNHPSG + PS+ DR +T RL AL LVDIR+ DH IVG S A G Sbjct: 162 LHDAASVIVAHNHPSGALAPSEQDRQLTRRLSSALSLVDIRLLDHFIVGFGDSVSLASLG 221 >UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9V0_9FIRM Length = 224 Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 51/114 (44%), Positives = 72/114 (63%) Query: 35 EWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVV 94 EW + +E F LYL+ +++LI+ LF GT+N + VHPREV K A NA +V+ Sbjct: 110 EWFKFEYGTMSQECFIALYLDTKSKLISHRVLFKGTLNESVVHPREVFKEAFLQNANSVL 169 Query: 95 LAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +AHNHPSG+ TPSKAD +T ++V + + + DH+IV NQ +SF EH L Sbjct: 170 IAHNHPSGDCTPSKADFEVTYKMVHVAMTMGVCLVDHIIVCKNQYYSFKEHKYL 223 >UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae RepID=C7NDB9_LEPBD Length = 240 Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 86/133 (64%) Query: 16 LDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTE 75 L + +H ++ TS +L ++ + E F+VL+LN QN+L+ E LF GTI+R+ Sbjct: 108 LYKKIHNKKISITSNIKLLNYLKCSLLKRDIEVFKVLFLNTQNELMKEEELFYGTIDRST 167 Query: 76 VHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVG 135 ++ RE+IK+ L +NA +V+L HNHP+G + PS +D L+T+++ + ++IR+ DHLI+ Sbjct: 168 IYIRELIKKILEYNAKSVILVHNHPAGSLKPSDSDILLTKKVKEVFESMEIRLLDHLIIS 227 Query: 136 GNQVFSFAEHGLL 148 FSF E G+L Sbjct: 228 EQGYFSFLEGGIL 240 >UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S9N8_PROA2 Length = 165 Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 57/122 (46%), Positives = 78/122 (63%), Gaps = 3/122 (2%) Query: 30 TRAAREWLILNMAGLE---REEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 TR + GL+ EEF LYL+ +N++I E + GT+N + VHPREV K A Sbjct: 44 TRCDIAYDFFCKIGLQDKASEEFYALYLDTKNKIIGLEMISRGTLNASLVHPREVFKGAF 103 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 NA +++LAHNHPSG PS AD+L+T RLV+A L+D++V DH+IVG +SF E G Sbjct: 104 LANANSIMLAHNHPSGNTEPSSADKLVTSRLVKAGKLLDLQVLDHIIVGDKGYYSFRESG 163 Query: 147 LL 148 L+ Sbjct: 164 LI 165 >UniRef50_Q02HM7 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa UCBPP-PA14 RepID=Q02HM7_PSEAB Length = 202 Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 62/144 (43%), Positives = 84/144 (58%), Gaps = 5/144 (3%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E L+QRA+ L+R + G S R R++L L + G E F ++L+ Q Sbjct: 64 EDQLVQRAIAVLERRMFRRGQELLSPRGLRQYLRLRLVGKSEEVFAAVFLDAQ-----WR 118 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GT+N ++ R V+KRAL HNA VV+AHNHPSG TPS+AD T +L AL LV Sbjct: 119 ALFRGTVNAAPMYARVVVKRALRHNAVGVVVAHNHPSGLATPSQADIAATRQLKAALNLV 178 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 DI + DH ++G + FSF + LL Sbjct: 179 DIELLDHFVIGRGEPFSFFDAQLL 202 >UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID=D2BJ47_DEHSV Length = 275 Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 50/114 (43%), Positives = 79/114 (69%) Query: 35 EWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVV 94 ++L M GL++E F+V+YL++Q++++ LFTGT+ + PREVI A+ NA+A++ Sbjct: 129 DYLYCAMRGLKKEVFKVIYLDSQHRVLELADLFTGTVASGSIVPREVIAAAISQNASALI 188 Query: 95 LAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 HNHPSG++ PS+AD+ +T LV A ++ IR DH+I+G N FSFA G++ Sbjct: 189 FVHNHPSGKIEPSQADKDVTRELVYAAMVMKIRALDHIIIGDNCYFSFAAAGIM 242 >UniRef50_Q5DY97 DNA repair protein RadC n=17 Tax=Proteobacteria RepID=Q5DY97_VIBF1 Length = 165 Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 60/148 (40%), Positives = 87/148 (58%), Gaps = 1/148 (0%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 T E+ ++ A ++ + A TS A E + + ERE F +L L+NQ++L Sbjct: 19 FTENEKMILAEAASIIEVKIRNTS-ALTSPDLAAELCVNRLVHQEREVFAILMLDNQHRL 77 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 I G+I+ V+PREV+K L++NAAAV+ AHNHPSG PS ADR IT RL A Sbjct: 78 IKFVEHSVGSISSASVYPREVLKSVLHYNAAAVIFAHNHPSGVAEPSDADRRITARLSSA 137 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L L+D++V DH ++G + SFA+ G + Sbjct: 138 LELIDVKVLDHFVIGVGETVSFAKRGWI 165 >UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. K31 RepID=B0T9F0_CAUSK Length = 223 Score = 111 bits (278), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 55/122 (45%), Positives = 83/122 (68%) Query: 27 FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 TS ++L MAGL REEF VL+L+ +NQL++ E L G+++ V+PREV++RAL Sbjct: 102 LTSFSQVADYLRALMAGLPREEFWVLFLDRRNQLLSAERLGVGSVDHAPVYPREVMRRAL 161 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 N +A++LAHNHPSG+ PS+ D +T+ L++A + I++ DH+IV G V SF +G Sbjct: 162 ELNCSAMILAHNHPSGDPQPSQPDIEMTKTLIEAGKALQIQIHDHMIVAGGAVVSFRANG 221 Query: 147 LL 148 L+ Sbjct: 222 LI 223 >UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=A1K759_AZOSB Length = 196 Score = 111 bits (277), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 59/129 (45%), Positives = 80/129 (62%), Gaps = 7/129 (5%) Query: 20 LHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPR 79 L PGV R++L G E F VLYL+ QN+LI E F GT+ +T V+PR Sbjct: 75 LDSPGVV-------RQFLRTFFEGKPYEIFVVLYLDAQNRLIRAEEAFRGTLTQTSVYPR 127 Query: 80 EVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQV 139 E+++R+L +AA V+ +H HPSG PS AD ++T L AL LVD+RV DH++V G++ Sbjct: 128 EILRRSLELHAAGVIFSHQHPSGVCEPSSADEVLTNMLKSALTLVDVRVLDHIVVAGDRA 187 Query: 140 FSFAEHGLL 148 SFAE G L Sbjct: 188 VSFAETGRL 196 >UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepID=Y3149_BORPD Length = 225 Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 58/123 (47%), Positives = 77/123 (62%) Query: 26 AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRA 85 A + + + + +A E LYL++Q LI L GT+ R V+PREV++ A Sbjct: 103 AMSEPGSVKRYFKTALANCAVEHCLALYLDSQLNLITSGELARGTLARASVYPREVVREA 162 Query: 86 LYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEH 145 L H+AAA++LAHNHPSG PS+ADR T + QAL LV+IR+ DHLIV G+ V S AE Sbjct: 163 LRHHAAALILAHNHPSGSAQPSQADRDFTRHMQQALALVEIRLLDHLIVAGDTVVSMAEL 222 Query: 146 GLL 148 GLL Sbjct: 223 GLL 225 >UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7M6_9FIRM Length = 228 Score = 110 bits (276), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 54/113 (47%), Positives = 75/113 (66%) Query: 36 WLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVL 95 WL + G ++E F +YL+ +N ++ LF GT++ + VHPREV K AL +A V++ Sbjct: 115 WLGREIGGKQQEHFLAIYLDAKNHILEHRLLFKGTLDASIVHPREVFKEALLASACRVLV 174 Query: 96 AHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 HNHPS ++TPS ADR+IT+RL + L+ I + DHLIVG Q FSF HGLL Sbjct: 175 VHNHPSQDLTPSLADRIITQRLKETGELIGIELLDHLIVGTTQYFSFRAHGLL 227 >UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID=Y1530_RUBXD Length = 227 Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/127 (47%), Positives = 84/127 (66%), Gaps = 2/127 (1%) Query: 23 PGVAFTSTRAAREWLILN-MAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREV 81 PG S+ A + L+ +A L+RE F V+ LN +N++I T+ GT++ + VHPREV Sbjct: 102 PGRPVISSPADVDGLLRGRIANLDREHFVVVLLNTKNEVIEAPTISVGTLSSSLVHPREV 161 Query: 82 IKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFS 141 K A+ +AA+VVLAHNHPSG V PS+ DR +T R+ +A G++ I V DH+IV G FS Sbjct: 162 FKPAIRASAASVVLAHNHPSGRVEPSREDREVTGRVAEAGGIIGIEVLDHVIV-GEGYFS 220 Query: 142 FAEHGLL 148 EHG+L Sbjct: 221 MKEHGML 227 >UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID=Y2409_LEGPL Length = 227 Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 55/125 (44%), Positives = 84/125 (67%), Gaps = 1/125 (0%) Query: 22 EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREV 81 + + ++T+ +L + + E F L+L+NQ+++IA E LF+GTIN V+PR + Sbjct: 98 QKEIRLSNTQQTYAFLKKRLRDYKNETFAALFLDNQHRIIAYEELFSGTINTATVYPRPI 157 Query: 82 IKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFS 141 ++R L NAAA++LAHNHPSG S+ D ITER+ AL LVD R+ DH+++G N+V+S Sbjct: 158 VERVLQLNAAALILAHNHPSGLSDASQQDLAITERIRDALDLVDARLLDHIVIGDNEVYS 217 Query: 142 -FAEH 145 FAE+ Sbjct: 218 IFAEN 222 >UniRef50_Q4QPE3 Putative DNA repair radC-like protein n=5 Tax=Haemophilus influenzae RepID=Q4QPE3_HAEI8 Length = 156 Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 51/132 (38%), Positives = 84/132 (63%) Query: 17 DRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEV 76 ++ ++ FT A+ + + ERE F VL+L+ ++LI E +F G+++ T V Sbjct: 25 EKPFYQGAQEFTEPSIAKLYFQTIIGNEERENFVVLFLDRIHRLIKSEVMFQGSVSETSV 84 Query: 77 HPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGG 136 RE+I++AL NA+A+++ HNHP+G V PS AD+ IT+RL +A L+DI++ DH IV G Sbjct: 85 SIREIIRQALKLNASAIIIGHNHPTGNVEPSDADKYITKRLKEACELMDIKLLDHFIVSG 144 Query: 137 NQVFSFAEHGLL 148 + F F ++ L+ Sbjct: 145 SASFCFTDNHLI 156 >UniRef50_A9IEU5 Putative DNA repair protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IEU5_BORPD Length = 174 Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 63/151 (41%), Positives = 94/151 (62%), Gaps = 6/151 (3%) Query: 1 MTPGERS---LIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 M P +R+ + R L ++D LH G ++ A+ +L L +AGLE E ++ L+ Q Sbjct: 27 MRPAQRAEILAVARELVSIDT-LH--GEDLSNPDKAKAFLQLRLAGLEHEVCALMLLDVQ 83 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 +LI F GT+++ V+PRE++K AL HNAA +++AHNHPSG S+ADR +T+ + Sbjct: 84 LRLITYLEPFRGTLSQAPVYPREILKLALRHNAAGLMMAHNHPSGLAEASQADRQLTQAV 143 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 QAL L+D+R+ DH IV G V S A+ G L Sbjct: 144 QQALALIDVRLLDHFIVAGTTVVSMAQRGQL 174 >UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacterium RepID=UPI0001BC61BD Length = 227 Score = 107 bits (268), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 47/103 (45%), Positives = 71/103 (68%) Query: 46 REEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT 105 RE+F VL+LN NQL+ E LF G+I+R+ V+PRE++++ L + A +V+ AHNHPSG Sbjct: 125 REKFFVLFLNTANQLLCSEELFQGSIDRSAVYPREILEKVLKYKAKSVIFAHNHPSGNTQ 184 Query: 106 PSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 PS+ D +T+ + AL + D+ + +H+IV + FSF E GLL Sbjct: 185 PSRQDIALTKEMKDALRMFDVLLIEHIIVSKHSYFSFLEEGLL 227 >UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteobacteria RepID=Y2304_PARDP Length = 263 Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 63/146 (43%), Positives = 92/146 (63%), Gaps = 4/146 (2%) Query: 5 ERSLIQRALKTLDRH--LHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIA 62 E +++ A + L R +H P TS A ++ MA E E+FRVLYL+ +N LIA Sbjct: 120 ELKIVEAAAQRLARSRVMHRP--VLTSWDALLDYCHTAMAHGEIEQFRVLYLDRKNVLIA 177 Query: 63 GETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALG 122 E GT++ V+PRE+++RAL +A+A++L HNHPSG+ TPS+AD +T R+V A Sbjct: 178 DEEQARGTVDHVPVYPREIMRRALELSASALILVHNHPSGDPTPSQADIGMTNRIVAAAE 237 Query: 123 LVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++ I V DHLI+G ++ SF GLL Sbjct: 238 VMGIAVHDHLIIGRSRELSFRSEGLL 263 >UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5M2_9BACL Length = 162 Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 49/132 (37%), Positives = 79/132 (59%), Gaps = 7/132 (5%) Query: 17 DRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEV 76 D ++H P F + ++ GL++E F +L LN +N++++ E + GT+N V Sbjct: 38 DHYIHTPADVFQAVAT-------DLVGLDKEHFMILILNTKNRILSKEVISIGTLNSAIV 90 Query: 77 HPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGG 136 HPREV K A+ AA+++ HNHPSG+ PS D+ +TERL+QA ++ I V DH+++G Sbjct: 91 HPREVFKPAIIKGAASIICVHNHPSGDPAPSSEDKKLTERLIQAGEIIGIDVLDHVVIGT 150 Query: 137 NQVFSFAEHGLL 148 S E G++ Sbjct: 151 EGYVSLKEQGMI 162 >UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R890_9FIRM Length = 227 Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 50/123 (40%), Positives = 77/123 (62%) Query: 26 AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRA 85 A +S + EWL+ + ++E F V++LN +NQ++A +TLF GT+ VHPRE+ K A Sbjct: 102 AISSPQKLSEWLMQQIGFQQQEHFLVVFLNQRNQILAYKTLFVGTLTSANVHPREIFKEA 161 Query: 86 LYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEH 145 + A ++ AHNHPSG S AD IT+++++ LV I + DH++VGGN+ S E Sbjct: 162 MRIGCAKIICAHNHPSGNPQVSDADIAITQQIMECGQLVSIPLLDHIVVGGNRYVSLREE 221 Query: 146 GLL 148 G + Sbjct: 222 GYM 224 >UniRef50_B6J212 DNA repair protein n=1 Tax=Coxiella burnetii CbuG_Q212 RepID=B6J212_COXB2 Length = 158 Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 47/81 (58%), Positives = 63/81 (77%) Query: 68 TGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIR 127 + + N+ VHPRE+IKRALYHN+AA+++AHNHPSG + PS+ADR T L +AL L+D+R Sbjct: 78 SKSFNQASVHPREIIKRALYHNSAALIVAHNHPSGVLDPSQADRAATTHLKEALALIDVR 137 Query: 128 VPDHLIVGGNQVFSFAEHGLL 148 + DH+I+G FSFAE GLL Sbjct: 138 LLDHIIIGDRNSFSFAESGLL 158 >UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobacteria RepID=Y1917_THICR Length = 225 Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 57/128 (44%), Positives = 82/128 (64%), Gaps = 1/128 (0%) Query: 22 EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREV 81 + G A T L ++ RE F ++ L+ QNQ I LFTGTIN+ VH REV Sbjct: 98 KKGEALTQPEKVARLLQHHIGHQSREIFGLVLLDQQNQFIQFVPLFTGTINQATVHIREV 157 Query: 82 IKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGN-QVF 140 +K L H+AAAV+LAHNHPSG+ TPS++DR +T ++ Q L L++ R DH+I+G + + + Sbjct: 158 LKTVLDHHAAAVILAHNHPSGDPTPSQSDRDLTHQIQQGLQLIETRCLDHIILGDHGRWY 217 Query: 141 SFAEHGLL 148 SF + G+L Sbjct: 218 SFTQQGIL 225 >UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus jensenii RepID=C2E2B4_9LACO Length = 207 Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 46/124 (37%), Positives = 80/124 (64%) Query: 25 VAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKR 84 + F S+ ++LI G+E+E+ V+YL+N+N+++ LF GT+NR+ VHPR++ + Sbjct: 84 IQFVSSHEVGKYLIDRFLGVEQEQLVVIYLDNKNKVLGERLLFQGTVNRSVVHPRDIFRW 143 Query: 85 ALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAE 144 A+++N+ +++AHNHPSG+ PS+ D T+++ +A L+ I DH+IV SF E Sbjct: 144 AVFYNSVGILIAHNHPSGDANPSQKDIEFTKQINKASDLMGINFLDHIIVADRSYLSFKE 203 Query: 145 HGLL 148 L+ Sbjct: 204 EQLI 207 >UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiaceae RepID=Y1761_CHLPD Length = 223 Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 54/120 (45%), Positives = 76/120 (63%) Query: 29 STRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYH 88 S R E++ + + +E VL+LN +NQ+I E + GT+N + HPREV K A+ Sbjct: 103 SARDVFEYMAGRVPDITKEHLFVLHLNTKNQIIRNEQVTVGTLNASLAHPREVFKSAIRE 162 Query: 89 NAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A A++L HNHPSG+V PS ADR +TE L QA + I + DH+I+G + FSF EH LL Sbjct: 163 SAHAIILVHNHPSGDVEPSNADRQVTEILRQAGSFLQIDLLDHVIIGVDTWFSFREHSLL 222 >UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A0L491_MAGSM Length = 241 Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 53/115 (46%), Positives = 76/115 (66%) Query: 34 REWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAV 93 R++L+ MAG E F VL L+ Q +L+ + GTI + VHPR+V++ + H AA V Sbjct: 121 RDYLVPLMAGRTEEVFYVLCLDAQCRLLFPALVTEGTIRQAHVHPRQVVELVIRHKAAHV 180 Query: 94 VLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +LAHNHPSG S+ D L+T L+QAL +D++V DHLI+ G +VFSFA G++ Sbjct: 181 ILAHNHPSGNPKASQDDILLTSHLMQALNPIDVQVLDHLIIAGEKVFSFASAGMM 235 >UniRef50_C6VI64 DNA repair protein n=3 Tax=Lactobacillus plantarum RepID=C6VI64_LACPJ Length = 211 Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 52/109 (47%), Positives = 72/109 (66%) Query: 40 NMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNH 99 + A LE+E+ ++L L+ +NQ+I + +F GT+N PRE+IK AL A VV+AHNH Sbjct: 97 DFANLEQEQLQLLCLDTKNQVIKRQVVFQGTLNSCPAQPREIIKVALTTPTARVVIAHNH 156 Query: 100 PSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 PSG+VTPSK D T+RL A L+ + + D I+G N FSFAE G+L Sbjct: 157 PSGDVTPSKKDVEFTKRLQLACELMGLPLLDSFIIGVNDYFSFAEQGVL 205 >UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z2T6_9GAMM Length = 223 Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 50/103 (48%), Positives = 69/103 (66%) Query: 45 EREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEV 104 RE F L+L+ Q QL+A +F GT+N V+PRE++ AL A+A+++AHNHPSG + Sbjct: 117 SREVFTCLFLDTQRQLLACRDMFFGTLNTAPVYPREIVAMALKMGASAIIVAHNHPSGCL 176 Query: 105 TPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGL 147 PS AD +T+RL +ALGL+DI + DHLIV + S A GL Sbjct: 177 APSVADIQLTDRLRRALGLIDIDLLDHLIVAQGRYLSMASEGL 219 >UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9I2_9FIRM Length = 224 Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 51/114 (44%), Positives = 75/114 (65%) Query: 35 EWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVV 94 + L +M+ L+ E F+V+ LN +N +I E + GTIN + VH REV + A+ NA +++ Sbjct: 111 DLLSYDMSFLDEEHFKVILLNTKNMVIETELISIGTINTSLVHVREVFRNAIKKNANSII 170 Query: 95 LAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 LAHNHPSG+ TPS D +T+RL A L+ I+V DH+I+G + FSF E +L Sbjct: 171 LAHNHPSGDSTPSIEDEHLTKRLKDAGELIGIKVIDHVIIGKDNYFSFMEENML 224 >UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9Z9_DESAH Length = 279 Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 50/103 (48%), Positives = 72/103 (69%) Query: 46 REEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT 105 RE F ++L+ +N+++A E LF G+++ + V+PREVI +AL H AAA++ AHNHPSGE + Sbjct: 165 REVFVGIFLDAKNRVLASEILFEGSLSSSAVYPREVIAKALEHRAAALIFAHNHPSGETS 224 Query: 106 PSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 PS D IT RL AL I V +HLI GG + +SFA+ G++ Sbjct: 225 PSPEDLAITRRLFFALAHAGITVHEHLITGGERFYSFADQGII 267 >UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVJ8_9FIRM Length = 236 Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 49/122 (40%), Positives = 78/122 (63%) Query: 27 FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 TS A ++++ +M LE E FR++ LN + ++ + G IN T VHPREV ++A+ Sbjct: 114 ITSPEDAAKYVMASMRDLETEVFRIIILNTKKEIKYIREISHGIINMTVVHPREVFRQAI 173 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 A +++L HNHP+G+ +PS+ DR +T RLV+ +V I + DH+I+G N FSF + G Sbjct: 174 SDGAHSIILLHNHPTGDPSPSQEDRNLTRRLVEVSKIVGIDICDHIIIGDNTFFSFLKEG 233 Query: 147 LL 148 +L Sbjct: 234 IL 235 >UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVH2_DESAS Length = 227 Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 55/139 (39%), Positives = 85/139 (61%), Gaps = 4/139 (2%) Query: 10 QRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTG 69 QR KT + + P V + A +++ M ++RE F+ L LN +N++I+ E + G Sbjct: 93 QRIAKT--KAMECPSV--KTPDDAVNYVMEEMRYMDREHFKALLLNTKNRVISLEAISVG 148 Query: 70 TINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVP 129 T+N + VHPRE+ K A+ +AAA++L HNHPSG+ TPS+ D +TERL +A +V I V Sbjct: 149 TLNSSNVHPRELFKVAIKRSAAAIILIHNHPSGDPTPSREDIDVTERLGEAGKIVGIDVL 208 Query: 130 DHLIVGGNQVFSFAEHGLL 148 DH+++G + S GL Sbjct: 209 DHIVIGDGKFVSLKAKGLF 227 >UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicutes RepID=Y4299_BACWK Length = 225 Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 48/121 (39%), Positives = 75/121 (61%) Query: 26 AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRA 85 + S +++ M L++E F LYLN +NQ+I +T+F G++N + VHPREV K A Sbjct: 103 SIRSPEDCASYMMEEMRFLQQEHFVCLYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEA 162 Query: 86 LYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEH 145 AA+++ HNHPSG+ PS+ D +T+RLV+ ++ I V DH+I+G ++ S E Sbjct: 163 FRRAAASIICLHNHPSGDPAPSREDIEVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEK 222 Query: 146 G 146 G Sbjct: 223 G 223 >UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J365_DESRM Length = 231 Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 50/114 (43%), Positives = 78/114 (68%), Gaps = 1/114 (0%) Query: 36 WLILNMAGL-EREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVV 94 +L+ N A L ++E F L LN +N +I ET+ GT+N + VHPRE+ K+A+ +AAAV+ Sbjct: 118 YLMKNEAKLLDKEYFSALLLNTKNHVIGKETISIGTLNSSMVHPRELFKQAIRRSAAAVI 177 Query: 95 LAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L HNHPSG+ TPS+ D +T+RL++A ++ I V DH+++G ++ S GL+ Sbjct: 178 LVHNHPSGDPTPSREDISLTKRLIEAGEIIGIDVLDHIVLGFDKFTSLKSKGLI 231 >UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobacteria RepID=Y700_RHOP2 Length = 250 Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 50/111 (45%), Positives = 75/111 (67%) Query: 27 FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 +S A ++ MA +RE+FR+L+L+ +NQLIA E GT++ T V+PRE++KRAL Sbjct: 129 LSSWSAVIDYCRTTMAFADREQFRILFLDKRNQLIADELQQVGTVDHTPVYPREIVKRAL 188 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGN 137 +A AV++ HNHPSG+ TPS+AD +T+ +V + + V DH+IVG N Sbjct: 189 ELSATAVIMVHNHPSGDPTPSQADIQMTKTIVAIAEPLGVAVHDHIIVGKN 239 >UniRef50_Q3A6E7 DNA repair protein, RadC-like n=3 Tax=Desulfuromonadales RepID=Q3A6E7_PELCD Length = 166 Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 56/123 (45%), Positives = 79/123 (64%), Gaps = 2/123 (1%) Query: 26 AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRA 85 AFTS R E L + +E F L+L+N+N+L+ + + G+++ + VHPREV K A Sbjct: 46 AFTSPRKVAEMLAF-LKAESKEYFMALHLDNKNRLLCLDRVSVGSLSASIVHPREVFKSA 104 Query: 86 LYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEH 145 L +AA +VL HNHPSG+ PS D +T RLV+A ++ I V DH+I+ G+ FSFAE Sbjct: 105 LLSSAAGLVLVHNHPSGQTEPSHEDEEVTTRLVKAGEMLGIHVLDHIIL-GDGFFSFAEQ 163 Query: 146 GLL 148 GLL Sbjct: 164 GLL 166 >UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacteria RepID=Q0BRK0_GRABC Length = 271 Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 53/113 (46%), Positives = 78/113 (69%) Query: 36 WLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVL 95 +L ++A + E+FRVL+L+N+NQLIA E L GT+N V+PREV+KRAL +A A+++ Sbjct: 159 YLNASLAREKNEQFRVLFLDNRNQLIADEILAHGTVNHAPVYPREVVKRALELHATALIV 218 Query: 96 AHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 HNHPSG+ TPS D +T L +A L+ + + DH+I+G + SF + GLL Sbjct: 219 VHNHPSGDPTPSAEDIRMTRELREAGRLLSLDLHDHVIIGRHGWSSFRKQGLL 271 >UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium RepID=B1YJT0_EXIS2 Length = 217 Score = 101 bits (251), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 48/120 (40%), Positives = 76/120 (63%) Query: 29 STRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYH 88 S A E L+ M ++E F LYLN +N++I+ +TLF G +N + VHPR++ + A+ Sbjct: 98 SPDDAAELLMEEMRLYQQEHFICLYLNTKNEVISKKTLFIGGLNTSIVHPRDIFREAIRC 157 Query: 89 NAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +AA+ + HNHPSG+ TPS+ D ++ER+V+A L+ I DHL++G Q S + G + Sbjct: 158 SAASFIAVHNHPSGDPTPSREDIEVSERMVEAGRLIGISCIDHLVIGHGQFISMKQRGFM 217 >UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter pasteurianus RepID=C7JGI7_ACEP3 Length = 249 Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 47/108 (43%), Positives = 74/108 (68%) Query: 41 MAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHP 100 M +RE+ RVL+LN++++L+A + + GT++ T V+PRE++ RAL NA +VL HNHP Sbjct: 142 MGPEKREQVRVLFLNDKHELLADDVMGQGTVDHTPVYPREIVARALQLNATMLVLVHNHP 201 Query: 101 SGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 SG+ TPS D ++T ++ A +++I V DH+IV G ++ S E G L Sbjct: 202 SGDPTPSADDVVMTTQICGAAKIMNIHVWDHIIVAGEKLLSMREAGFL 249 >UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus RepID=C7RDS9_ANAPD Length = 228 Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 47/133 (35%), Positives = 83/133 (62%), Gaps = 4/133 (3%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 + LD+ + + TS++ + + ++ L++E F + L+++N +IA E + G + Sbjct: 98 RVLDKKIEK----ITSSKDVYDIMSPRLSNLKKEYFYAILLDSKNVIIAKEVISIGDLGS 153 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 T V+PREV K A+ +A +++L HNHPSG PS D LIT+RL +A ++DI+V DH++ Sbjct: 154 TVVNPREVFKPAIKKSAKSMILVHNHPSGNPKPSTEDFLITDRLAEAGDILDIKVLDHIV 213 Query: 134 VGGNQVFSFAEHG 146 +G + +SF + G Sbjct: 214 IGNSSYYSFKKEG 226 >UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae RepID=Y1235_THEP1 Length = 222 Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 51/108 (47%), Positives = 71/108 (65%) Query: 41 MAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHP 100 M LERE +V+ L+ + +I TL GT +R+ +HPR+V + A+ NA+ V++ HNHP Sbjct: 115 MVYLEREIVKVICLDTKLNVIGENTLTVGTSDRSLIHPRDVFRTAIRANASGVIVVHNHP 174 Query: 101 SGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 SG+ TPSK DRLITERL QA ++ + + DH+IV FSF E G L Sbjct: 175 SGDPTPSKEDRLITERLKQAGEILGVSLVDHVIVSRRGYFSFREEGEL 222 >UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes RepID=C0BM81_9BACT Length = 231 Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 52/124 (41%), Positives = 80/124 (64%) Query: 25 VAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKR 84 ++ +S+ AA L + GL EEF VLYL+N N LI L G T V R V+++ Sbjct: 108 LSLSSSGAAFSILKPVLIGLTYEEFWVLYLDNSNVLIERSLLGKGGFTATVVDIRLVLQQ 167 Query: 85 ALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAE 144 A+ A A+++AHNHP+G + PS +D+ +T++L +A ++DI++ DH+IVG N+ FSFA+ Sbjct: 168 AIRWGATAMIVAHNHPTGNLKPSHSDKALTQKLKEAAKVLDIKLLDHIIVGKNEYFSFAD 227 Query: 145 HGLL 148 LL Sbjct: 228 QNLL 231 >UniRef50_C9NPT2 DNA repair protein RadC n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPT2_9VIBR Length = 224 Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 86/144 (59%), Gaps = 3/144 (2%) Query: 5 ERSLIQRALKTLDRHL--HEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIA 62 +++++Q A + R+ P V + + + ++A ++RE F L+L+N + + Sbjct: 80 DQAVLQEAKDIIARYWAARSPNV-LNAPNLVKMYCQCHLAHVDREVFGALWLDNGLRALG 138 Query: 63 GETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALG 122 LF G++N VH REV++ L NAAAV+ HNHPSG+ +PS+ADR +T L LG Sbjct: 139 TVDLFAGSLNHAAVHTREVLRSGLRLNAAAVIFYHNHPSGDPSPSQADRQLTNHLKDVLG 198 Query: 123 LVDIRVPDHLIVGGNQVFSFAEHG 146 ++IRV DH++V + V SFAE G Sbjct: 199 QIEIRVLDHMVVSLSGVVSFAERG 222 >UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BG63_9BACT Length = 232 Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 73/135 (54%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 K + + S++ E + +++ L EEF +LYLN N+L+ L G I + Sbjct: 98 KRFQKQQPDKTTVLNSSKIVYESIYMDLDTLPHEEFWILYLNQSNRLLEKYRLSKGGITQ 157 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 T V R KRA A ++LAHNHPSG +TPS +D IT + A VD+R+ DHLI Sbjct: 158 TTVDLRLAFKRAFEVGATGLILAHNHPSGGLTPSSSDEQITRKFKLAAASVDLRILDHLI 217 Query: 134 VGGNQVFSFAEHGLL 148 V FSFA+ GLL Sbjct: 218 VSKKGYFSFADEGLL 232 >UniRef50_C0QCU0 RadC2 n=2 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QCU0_DESAH Length = 187 Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 46/106 (43%), Positives = 75/106 (70%), Gaps = 2/106 (1%) Query: 45 EREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEV 104 +RE+F +L LN +N++I + TG+++ VHPREV+K A+ N++A++L HNHPSG + Sbjct: 74 DREQFCILMLNAKNKIIGLNIVSTGSLSSATVHPREVLKPAILANSSAMILCHNHPSGTL 133 Query: 105 TPSKADRLITERLVQALGLVDIRVPDHLIVG--GNQVFSFAEHGLL 148 TPS D IT+R++QA ++ I V +HLI+ + +SF+E+GL+ Sbjct: 134 TPSPEDIAITKRIIQASDIMGITVHEHLIINMDDDSFYSFSENGLI 179 >UniRef50_Q2QJL1 DNA repair protein RadC n=1 Tax=Acetobacter aceti RepID=Q2QJL1_ACEAC Length = 147 Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 46/104 (44%), Positives = 71/104 (68%) Query: 45 EREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEV 104 +RE+ RVL+LN+Q+QL+A + + GT++ T V+PRE++ RAL A +VL HNHPSG+ Sbjct: 44 KREQVRVLFLNDQHQLLADDIMGQGTVDHTPVYPREIVARALQLKATLLVLVHNHPSGDP 103 Query: 105 TPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 TPS D ++T ++ A +++I V DH+IV G ++ E G L Sbjct: 104 TPSADDVVMTNQICGAAKIMNIHVWDHIIVAGEKLLCMREAGFL 147 >UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonella RepID=A1UT15_BARBK Length = 265 Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 49/116 (42%), Positives = 73/116 (62%) Query: 27 FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 F+S + MA RE+FR+L+L+ ++ L++ E TGTI+RT V+PREV+ RAL Sbjct: 144 FSSWDKVLAYCKAVMAHETREQFRILFLDKKHGLLSDEVQQTGTIDRTPVYPREVVSRAL 203 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSF 142 +A+ ++L HNHPSG+ +PS+ D +T RL +DI + DHLI+ N SF Sbjct: 204 ELSASGIILVHNHPSGDASPSQEDISMTYRLKDVANALDITLHDHLIIARNDYISF 259 >UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrueckii subsp. bulgaricus RepID=Q04B84_LACDB Length = 204 Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 1/148 (0%) Query: 2 TPGERSL-IQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 P + SL I+ A+ L R + + +L + G ++E+F VLY + Q L Sbjct: 57 CPNDLSLTIEVAMDRLRRTDMRRSSDWAGSSKIGNYLANKLLGQKQEQFWVLYFDQQQNL 116 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 + + LF GT++R+ VHPRE+ + A+ + A++++AHNHPSG +TPS D +T+ L +A Sbjct: 117 LGEKMLFQGTLDRSWVHPREIFRWAVVYGCASIIVAHNHPSGALTPSDNDLELTKGLKKA 176 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++ I DH I+GG + S E L Sbjct: 177 SKIMKITFLDHFIIGGGEYLSLRERELF 204 >UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcinaceae RepID=Y2303_METBF Length = 229 Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 46/135 (34%), Positives = 81/135 (60%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 + L+ + EP S + + M ++E+F L L+ +NQ++ E + G++N Sbjct: 94 RRLETFVEEPKRKVCSPKDVYTLMYPKMREQKKEKFITLCLDTKNQILKEEVVSIGSLNA 153 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 + VHPREV K AL ++A+V++ HNHPSG+ +PS+ D ++TE++V+ L+ I V DH+I Sbjct: 154 SIVHPREVFKSALMESSASVIMIHNHPSGDPSPSREDIMVTEKMVEGGKLLGIDVLDHII 213 Query: 134 VGGNQVFSFAEHGLL 148 +G + S + G + Sbjct: 214 IGEGRYVSLKDEGFV 228 >UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter oxydans RepID=Q5FNC4_GLUOX Length = 216 Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 59/148 (39%), Positives = 86/148 (58%), Gaps = 1/148 (0%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 M P R L + AL+ +R P + + ++L +A E+FR+L+LN +N L Sbjct: 70 MLPMIRVLQEAALR-YNRARLPPEDVLDNEQKLLDYLTARLARENIEQFRILFLNEKNSL 128 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 IA E GT+N T V+PREV +RA+ A A+VL HNHPSG+ TPS+AD +T ++ A Sbjct: 129 IADEAQARGTVNHTPVYPREVARRAVEIGATALVLVHNHPSGDPTPSEADLQMTMQVQAA 188 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L +V + + DH I+G + SF LL Sbjct: 189 LEVVGVTIADHFIIGNGRHTSFRRSNLL 216 >UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus RepID=C2BCF6_9FIRM Length = 226 Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 49/119 (41%), Positives = 78/119 (65%) Query: 17 DRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEV 76 ++ L++ S A E++ ++ +RE F + LNN+N++I+ E + G ++ + V Sbjct: 95 EKILNKKKYQINSNEEAYEFIKDTISLKDREYFYTILLNNKNEVISKELISIGDLSSSIV 154 Query: 77 HPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVG 135 +PREV K A+ +A +++LAHNHPSG +PSKAD LIT RL+ A ++DI V DHLI+G Sbjct: 155 NPREVFKPAIKKSAKSMILAHNHPSGNPSPSKADLLITHRLIDAGEILDITVLDHLIIG 213 >UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Y852_LACSS Length = 224 Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 48/120 (40%), Positives = 75/120 (62%) Query: 29 STRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYH 88 S++ + +I ++AG +E+ +YL+ +NQ+I + L+ GT+N + HPREV K A+ + Sbjct: 103 SSQMVGQRMIESLAGETQEQLLAVYLDVKNQIIQIKQLYLGTLNSSVAHPREVFKWAVQY 162 Query: 89 NAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +AA +L HNHPSG++ PS D T+R+V L+ I DHLI+G +Q S E G L Sbjct: 163 SAAKFILVHNHPSGQLAPSTQDINFTKRIVNCGQLMGITCLDHLIIGSSQYLSLREEGYL 222 >UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNR3_HIRBI Length = 272 Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 49/102 (48%), Positives = 70/102 (68%) Query: 47 EEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTP 106 E+FRVL+L+++NQLIA E GTIN V+PRE+ KRAL +A+A++L HNHPSG+ TP Sbjct: 171 EQFRVLFLDHKNQLIADERQSQGTINHAPVYPRELAKRALELSASALILVHNHPSGDPTP 230 Query: 107 SKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 S+AD +T ++ A ++I + DHLIVG + S L+ Sbjct: 231 SRADIDVTREIMDAFEPLEITIHDHLIVGKKGITSLKAKNLI 272 >UniRef50_C6E4Z0 DNA repair protein RadC n=3 Tax=Geobacter RepID=C6E4Z0_GEOSM Length = 167 Score = 97.8 bits (242), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 48/101 (47%), Positives = 71/101 (70%), Gaps = 1/101 (0%) Query: 46 REEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT 105 +E F L+L+ +N+++ + + TG++N++ VHPRE+ K AL +AAAV+L HNHP+G+ T Sbjct: 66 KEHFIALHLDGKNRIVCIDMVSTGSLNQSIVHPRELFKTALLSSAAAVILLHNHPTGDPT 125 Query: 106 PSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 PS D IT RL +A L+ IRV DH+I+G N +SF E G Sbjct: 126 PSTEDLTITRRLQEAGELIGIRVLDHIIIGDN-YYSFTERG 165 >UniRef50_A9I305 DNA repair protein radC homolog n=3 Tax=Proteobacteria RepID=A9I305_BORPD Length = 177 Score = 97.8 bits (242), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 49/115 (42%), Positives = 73/115 (63%) Query: 32 AAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAA 91 A + + ++G+ E VLYLN+Q ++I + GT+ + V+PRE++K AL +AA Sbjct: 61 AVKHYFQAKLSGMGHEVAAVLYLNSQFKVIRYMEMSHGTLTQASVYPREIVKTALRLDAA 120 Query: 92 AVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 A++++HNHPSG PS+AD +T L AL LVD+R+ DH+IV G S AE G Sbjct: 121 AIIMSHNHPSGIPEPSEADLALTRHLKHALALVDVRLVDHIIVTGQNTTSLAERG 175 >UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcus RepID=Y1555_STAAE Length = 228 Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 47/122 (38%), Positives = 73/122 (59%) Query: 25 VAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKR 84 + T +++I M L +E F +L LN++N +I +F GT+N + VHPRE+ Sbjct: 101 IKITQPSDVADYMIPTMKDLTQEHFVILLLNSKNVVIKETCVFKGTLNSSIVHPREIFSI 160 Query: 85 ALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAE 144 A+ NA A++ HNHPSG+VTPS+ D + T RL + ++ I + DH+I+G N+ S E Sbjct: 161 AVRENANAIIAVHNHPSGDVTPSQEDIITTMRLKECGLILGIDLLDHIIIGDNRFTSLVE 220 Query: 145 HG 146 G Sbjct: 221 AG 222 >UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales RepID=Q2GL92_ANAPZ Length = 232 Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 50/114 (43%), Positives = 72/114 (63%) Query: 35 EWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVV 94 ++L + + E F VLYLN + LIA E TGT++ T ++ REVI++AL A +V Sbjct: 119 DYLKVKIGNSTIENFLVLYLNKRYSLIADEVQSTGTVDETPLYIREVIRKALLCGAVYIV 178 Query: 95 LAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++HNHPSG+ PSKAD +T +L A +DI + DH+IV + +SF HGLL Sbjct: 179 ISHNHPSGDPKPSKADINVTNKLRIACNSMDIELVDHVIVTSKRHYSFKTHGLL 232 >UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SK46_9CAUL Length = 244 Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 87/149 (58%), Gaps = 3/149 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 MTP +Q + R + EP +S +A +L + +A RE+FR+L+L+ + Sbjct: 94 MTPDIALDLQLMFEATRRLMAEPLKRSTVISSWQALLSYLRVTLAHEPREQFRLLFLDKK 153 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 NQLIA E + GT++ +PRE+++RAL +A++V+L HNHPSG+ PS+ D +T+ Sbjct: 154 NQLIADEIMNYGTVDHAPAYPREIMRRALELSASSVILVHNHPSGDPMPSQGDIDMTKAN 213 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 + A + I + DHLIVG V S + G Sbjct: 214 IAAGKPLKIAIHDHLIVGREGVLSMKQVG 242 >UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadales RepID=A0R7V6_PELPD Length = 168 Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 50/122 (40%), Positives = 76/122 (62%), Gaps = 1/122 (0%) Query: 27 FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 FTS + E L ++ +E F L+L+ +N+++ + + G++N++ VHPREV K AL Sbjct: 48 FTSPKQVFE-LFKDLIYETKEHFITLHLDGKNRIMCMDRVSIGSLNQSIVHPREVFKTAL 106 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 NAAA++ H HPSG+ PS D IT+RL +A ++ IRV DH++VG SF E G Sbjct: 107 LSNAAAIICVHQHPSGDPNPSSEDLSITKRLKEAGEIMGIRVLDHIVVGHEDYISFVEKG 166 Query: 147 LL 148 L+ Sbjct: 167 LM 168 >UniRef50_C1QC41 DNA repair protein n=2 Tax=Brachyspira RepID=C1QC41_9SPIR Length = 227 Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 41/113 (36%), Positives = 73/113 (64%) Query: 36 WLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVL 95 +LI+ + L+ E F ++ L+ + I+ E +F GTI+ ++PR++++++L ++ V++ Sbjct: 106 YLIIKLGKLKFETFSIVCLDVNKKFISMEHIFRGTIDSATIYPRDLVEKSLSLGSSYVIV 165 Query: 96 AHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +HNHPSG PSK D IT L +A +VDI++ DH+I+ N +SF E G+ Sbjct: 166 SHNHPSGIAKPSKEDINITNVLYKAFKMVDIKMLDHIIIAANSYYSFREDGMF 218 >UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJ65_9BACT Length = 221 Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 73/110 (66%) Query: 33 AREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAA 92 A ++L +A ++E F L+L+ +L+ E LF GT++R V+PRE+ +RA+ A Sbjct: 106 AAQFLKYKIAYDKKEHFVALFLDVNKKLLGFENLFKGTVDRLAVYPREIAERAITSKATH 165 Query: 93 VVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSF 142 V++AHNHPSG ++PS+ D +T++L++AL +DI + DH+I+ +SF Sbjct: 166 VIVAHNHPSGNMSPSETDITLTDKLIKALAALDINLADHIIITTKGFYSF 215 >UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepID=Y2926_ENTFA Length = 232 Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 43/121 (35%), Positives = 76/121 (62%) Query: 28 TSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALY 87 TS++ + L+ M GL++E +YLN +N +I +T+F G++N++ HPRE+ + A+ Sbjct: 109 TSSQQVAQRLLQEMKGLQQEHLICIYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVK 168 Query: 88 HNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGL 147 +++A ++LAHNHPSG TPS D T+R+ + ++ I++ DH+I+G + S E Sbjct: 169 YSSARILLAHNHPSGNPTPSPQDIQFTKRMEECGEMMGIQLLDHIILGDSGYISLREENF 228 Query: 148 L 148 Sbjct: 229 F 229 >UniRef50_C7VI58 DNA repair protein RadC n=3 Tax=Bacilli RepID=C7VI58_ENTFA Length = 117 Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 49/105 (46%), Positives = 71/105 (67%), Gaps = 1/105 (0%) Query: 45 EREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEV 104 +RE F V+ LN +N ++A G++N + VHPREV K A+ +NAA+V++AH HPS ++ Sbjct: 13 DREVFFVMCLNTRNNVVAVLRCHVGSLNASLVHPREVFKSAILNNAASVIVAHQHPSDDI 72 Query: 105 TPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVF-SFAEHGLL 148 TPSK D +T+RLV+A L+DI V DHL+V + F S E G + Sbjct: 73 TPSKEDINVTKRLVEAGKLLDIEVLDHLVVNSDNGFTSLKERGYI 117 >UniRef50_C0R372 DNA repair protein RadC, putative n=11 Tax=Wolbachia RepID=C0R372_WOLWR Length = 218 Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 50/150 (33%), Positives = 87/150 (58%), Gaps = 3/150 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHEP--GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 +T ++I +TL+R L E + E+L +++ ERE ++LYLN + Sbjct: 70 VTDSAVAMIMCVKETLERVLKEKLKSEPIMDLQGIVEYLNVSIGHSERECVKILYLNKRR 129 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 QLI GE + G + + V+ +E+ ++AL NA +++++HNHP G + PS+ D+ +T+ L Sbjct: 130 QLI-GEESYIGEMEKAPVYIKEITRKALMKNATSIIMSHNHPGGSLEPSEEDQAVTKSLA 188 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A V +++ DH+I+ FSF E+GLL Sbjct: 189 AACSTVSVKLFDHIIITSGGYFSFRENGLL 218 >UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae RepID=Y1834_PSYA2 Length = 227 Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 80/134 (59%), Gaps = 1/134 (0%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 + LD L + G ++ ++++ ++ G RE F VL L+N LI E LFTG I+ Sbjct: 91 RYLDSQL-KTGQGLGRSQMVKDYISTHLRGEPREVFAVLCLDNALNLINFEILFTGGISS 149 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 V + V++ AL H + +++AHNHP + TPS AD L+T L +A L+D+ + DH+I Sbjct: 150 CSVCIKHVLRHALSHATSQLIIAHNHPHTDATPSTADNLLTYELKKACDLIDLSLIDHVI 209 Query: 134 VGGNQVFSFAEHGL 147 VG N+ S+AE+ L Sbjct: 210 VGRNETLSYAENCL 223 >UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleidia extructa W1219 RepID=D2MNQ5_9FIRM Length = 223 Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 82/135 (60%), Gaps = 8/135 (5%) Query: 13 LKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTIN 72 L TL R H P V F +WL + +E+F V++L + ++++ + LF GTIN Sbjct: 96 LPTLPRVQH-PSVLF-------DWLKQEIGTSLQEKFLVVFLASDQRVLSYKILFVGTIN 147 Query: 73 RTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHL 132 + V PRE+ K AL N+ ++L HNHPSG ++PS+ D +T+R+ +A L+ ++V DH+ Sbjct: 148 ASMVFPREIFKEALLLNSPNIILVHNHPSGNLSPSQEDISLTKRIKEAGQLMGVKVLDHI 207 Query: 133 IVGGNQVFSFAEHGL 147 IV + FSF + G+ Sbjct: 208 IVTQSDYFSFVQEGI 222 >UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID=B9MPC4_ANATD Length = 232 Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 46/120 (38%), Positives = 74/120 (61%) Query: 29 STRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYH 88 + AA E++ G + E F V+ L+ Q +I LF GT+ V+PR+V++ + + Sbjct: 108 NVEAAAEYIKSLFVGRKNEVFYVICLDTQLNVIYSVPLFEGTVKEAVVYPRKVVECVIRY 167 Query: 89 NAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 NA++V+LAHNHP G V PS D T+++V AL + + V DH IV ++ +SFA++G+L Sbjct: 168 NASSVILAHNHPGGSVRPSMDDIKTTQKIVNALSTIGVAVNDHFIVAKDEYYSFAQNGML 227 >UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes RepID=Y1642_SYNWW Length = 235 Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 49/117 (41%), Positives = 73/117 (62%) Query: 32 AAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAA 91 A RE + M +RE FRVLYL+ + LI + + G ++ + VHPREV K A+ +AA Sbjct: 119 AVRELAMEEMRHYDREHFRVLYLDRKGGLITMQDISIGGLHSSIVHPREVFKTAVKKSAA 178 Query: 92 AVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +++L HNHPSG+ TPS+ D IT RL++A ++ I + DH+I+G S GL+ Sbjct: 179 SMILVHNHPSGDPTPSQEDIEITRRLIEAGKIMGIEILDHVIIGEINYCSLKARGLI 235 >UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteobacteria RepID=Y1139_BURP1 Length = 278 Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 54/118 (45%), Positives = 78/118 (66%) Query: 29 STRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYH 88 S A ++L L + RE F L+L+ +++L+ E G++ R V+PRE+++RAL Sbjct: 159 SPGAVDDYLRLLIGTRPREVFVCLFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALAL 218 Query: 89 NAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 NAAA+++AHNHPSG V PS ADR +T L AL LVDI++ DH +VG + FSFA+ G Sbjct: 219 NAAALIVAHNHPSGAVRPSAADRRLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAG 276 >UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B4AA Length = 226 Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 41/102 (40%), Positives = 68/102 (66%) Query: 41 MAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHP 100 M+ L +E F ++ L+N N+LIA +TLF G++N + V RE+ + AL N +++ HNHP Sbjct: 115 MSHLSQEHFLIMILDNHNRLIAEKTLFIGSVNMSIVSAREIFREALAFNGVSIICVHNHP 174 Query: 101 SGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSF 142 SG+ PS D +T++LV ++++ + DH+I+G NQ +SF Sbjct: 175 SGDAHPSSEDISMTQKLVDLGKMMNVDIVDHIIIGRNQYYSF 216 >UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales RepID=A9KL05_CLOPH Length = 232 Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 43/125 (34%), Positives = 78/125 (62%) Query: 24 GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIK 83 G+ +T + E+ + +M L+ E+ R+L + +++L+ E + GT+N + + PREV Sbjct: 107 GIRYTDPSSVAEYYMQDMRSLKTEQSRLLMFDTKSKLLREEIISIGTVNASIMSPREVFL 166 Query: 84 RALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFA 143 A+ + A ++L HNHPSG+ TPSK D +T+R+ +A L+ + + DH+I+G N+ S Sbjct: 167 LAVKYEAVYIILLHNHPSGDPTPSKEDIAVTKRMKEAGELLGVTLMDHIIIGDNRYISLK 226 Query: 144 EHGLL 148 E G++ Sbjct: 227 EQGII 231 >UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium RepID=C3WLA1_9FUSO Length = 242 Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 44/110 (40%), Positives = 70/110 (63%), Gaps = 1/110 (0%) Query: 40 NMAGLER-EEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHN 98 N G E E+F V+YL++ N++IA E +GT++R+ ++PRE+ KR + NA ++++AHN Sbjct: 133 NKIGYEDVEKFYVIYLSSSNEVIAFEESSSGTLDRSSIYPREIYKRVIMENAKSIIIAHN 192 Query: 99 HPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 HPSG PSK D IT + + L + +H+I+ + FSF E GL+ Sbjct: 193 HPSGNTCPSKCDIDITNEIAKGLKNFGALLLEHIIITRDSYFSFLEEGLI 242 >UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC32AB Length = 227 Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 47/122 (38%), Positives = 74/122 (60%) Query: 27 FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 F +++ A ++ + + LE E F VL LN + +LI + L GT+N T + REV + AL Sbjct: 106 FNTSKDAADYCMEELRHLEYECFMVLLLNTKCELINEKILSMGTVNYTCITSREVYRYAL 165 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 A +++ HNHPSG+ TPS+ D L T++L +A LV I + DH+I+G N+ S E Sbjct: 166 SKGAVYIIVVHNHPSGDPTPSREDSLCTKKLKEAGELVGIPLIDHIIIGDNRYISLKEQD 225 Query: 147 LL 148 ++ Sbjct: 226 MI 227 >UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Deltaproteobacteria RepID=Q6AQC9_DESPS Length = 249 Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 45/114 (39%), Positives = 76/114 (66%), Gaps = 1/114 (0%) Query: 35 EWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVV 94 E+L M GL++E F V++L++ + +I E + G++ VHPRE++ +AL H+AAA++ Sbjct: 120 EYLSYRMRGLKKEVFCVVFLDSSHGIICSEIIAEGSLTVNTVHPRELLVKALEHHAAALI 179 Query: 95 LAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++HNHPSG + PS D +T L + I++ DH+I+ G+ +SFA+HGL+ Sbjct: 180 ISHNHPSGALLPSPQDIQLTRLLYFLCSSMQIQLLDHIII-GDGAYSFADHGLM 232 >UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR9_THEYD Length = 224 Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 47/122 (38%), Positives = 76/122 (62%) Query: 27 FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 F S + + GL++E F L L+ + +LI + GT+N++ +HPREV K A+ Sbjct: 103 FNSAEIVYNYFFPKLNGLKKEVFITLLLDTKLRLIREVKVSEGTLNQSLIHPREVFKDAV 162 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 +A AV+L HNHPSG+ TPS+ D IT++L +A +++I + DH+I+G + FS E G Sbjct: 163 KESAYAVILIHNHPSGDPTPSEQDIEITKKLKKASEILEIPILDHVIIGSGKYFSMKERG 222 Query: 147 LL 148 ++ Sbjct: 223 VV 224 >UniRef50_C8N8A0 DNA repair protein RadC n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N8A0_9GAMM Length = 224 Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 56/135 (41%), Positives = 80/135 (59%) Query: 12 ALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTI 71 A + + + +P +F + R++L++ G E F VL+LN Q+ IA E L G Sbjct: 88 ARRFMREEMRQPSWSFKTAADVRDYLLMQFKGQALEAFGVLFLNQQHGFIAFERLAAGAA 147 Query: 72 NRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDH 131 + V R++I AL+H+AAAV+LAHNHP+G PS DR +T L AL L+DIR+ DH Sbjct: 148 AKVPVPVRQLIASALHHHAAAVILAHNHPAGSGAPSAEDRDVTRHLDDALALMDIRLLDH 207 Query: 132 LIVGGNQVFSFAEHG 146 IV GN++ S E G Sbjct: 208 FIVAGNEMVSMRERG 222 >UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q042N7_LACGA Length = 206 Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 44/109 (40%), Positives = 68/109 (62%) Query: 40 NMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNH 99 + G +EE +YL+++N++IA + +F GT+NR HPR++ + A+ +N+ A +AHNH Sbjct: 98 KLCGRPQEELYGIYLDSKNKIIAEKLIFQGTVNRAVAHPRDIFRWAVIYNSTAFFVAHNH 157 Query: 100 PSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 PSG+ PS+ D T++LV+A + I DH IV N SF E LL Sbjct: 158 PSGDEQPSQHDLRFTKKLVEASKCMGIDFLDHFIVTDNTYLSFREMELL 206 >UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrionales RepID=C4XRP2_DESMR Length = 228 Score = 94.4 bits (233), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 45/104 (43%), Positives = 66/104 (63%) Query: 45 EREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEV 104 E EEF + ++ +N+L+ E + GT+++ V+PREVI AL +NA+ V+L HNHP + Sbjct: 125 EHEEFWMALVDTKNRLVGWERVSKGTVDQAAVYPREVIAMALRYNASGVILVHNHPGADP 184 Query: 105 TPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 PS D T R+V A +DIRV DHL+V N+ FSF G++ Sbjct: 185 KPSAEDMAFTRRIVAAAREMDIRVLDHLVVTENRFFSFQAEGMI 228 >UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HJN5_GLUDA Length = 221 Score = 94.4 bits (233), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 47/102 (46%), Positives = 67/102 (65%) Query: 47 EEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTP 106 E+FRVL+L+ +LIA E L GTI++T V+PREV++RA+ A+ ++L HNHP TP Sbjct: 120 EQFRVLFLDRGTRLIADEVLAQGTIDQTPVYPREVMRRAIQLKASELILVHNHPGWNPTP 179 Query: 107 SKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 S+ D +T RL Q ++ + V DH+IVG SF + GLL Sbjct: 180 SREDIAMTRRLAQIATVLGLTVRDHVIVGNGASISFRQAGLL 221 >UniRef50_Q9LAI3 RadC (Fragment) n=2 Tax=Firmicutes RepID=Q9LAI3_BACSQ Length = 119 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 44/104 (42%), Positives = 71/104 (68%) Query: 41 MAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHP 100 + ++R+ F V+ L+ +NQ A G++N + VHPREV+K A+ N+A+V++AHNHP Sbjct: 12 LVDVDRDYFLVICLDTKNQPTAINICHVGSLNASLVHPREVMKPAILSNSASVIVAHNHP 71 Query: 101 SGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAE 144 S + TPSK D +T+RL++A ++ I + DH++VGGN+ S E Sbjct: 72 SLDPTPSKEDINVTKRLIEAGRIMGIDILDHIVVGGNKYVSLKE 115 >UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DS55_9BACT Length = 235 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 52/129 (40%), Positives = 80/129 (62%), Gaps = 4/129 (3%) Query: 11 RALKTLDRHL--HEPGVAFTSTR--AAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 RA+ L R L E FT R +A +LI +AG +EEF +L L+ +N+L+ + Sbjct: 86 RAVFALARKLVAEEAMEQFTIHRPESAAPYLIQLLAGKSKEEFHILLLDTKNRLMRSSQI 145 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 G ++R+ VHPREV + AL + A ++LAHNHPSG+ +PS D T+ L++A ++ + Sbjct: 146 SIGLLDRSHVHPREVFREALRYGTAKIILAHNHPSGDPSPSPQDIECTKNLIEAGEILGV 205 Query: 127 RVPDHLIVG 135 +V DHLI+G Sbjct: 206 KVVDHLIIG 214 >UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q1WT78_LACS1 Length = 225 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 83/149 (55%), Gaps = 6/149 (4%) Query: 5 ERSLIQRALKTLDRHLHEP-----GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQ 59 E+ I RAL+ E G F+S ++I + ++E + L+ +NQ Sbjct: 76 EKVAIIRALREFSERYKEKEGLVLGQIFSSCMFGN-YMIDKIGDSKQELLVCVCLDTKNQ 134 Query: 60 LIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQ 119 +++ + +F GT+N VHPRE+ K AL + A +++AHNHPSG V PS+ D +T+RL+ Sbjct: 135 VLSEKVIFKGTLNSATVHPREIFKHALNFSCARILVAHNHPSGNVEPSENDIQLTKRLIN 194 Query: 120 ALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A ++ I + DH+IVG S AE ++ Sbjct: 195 AGKMIGIELIDHVIVGSEVYLSLAEEKIV 223 >UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BYC2_DESAD Length = 225 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 50/126 (39%), Positives = 77/126 (61%), Gaps = 6/126 (4%) Query: 26 AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRA 85 A +S + + + L +EEF + +NN+N++I E L GT+++T V+PREV+ A Sbjct: 103 AISSPDVVYKAAMARIGNLSKEEFWIALVNNRNKVICWERLSEGTVDKTAVYPREVVALA 162 Query: 86 LYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGL---VDIRVPDHLIVGGNQVFSF 142 L HNA+ V+L HNHP G+ +PS D TER ++ L ++IR+ DH+IV ++ SF Sbjct: 163 LRHNASGVILTHNHPGGDPSPSPED---TERTMEIAALCQDMEIRLLDHVIVTADRFHSF 219 Query: 143 AEHGLL 148 E G L Sbjct: 220 KEAGYL 225 >UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular organisms RepID=Y2289_ALKMQ Length = 232 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 46/113 (40%), Positives = 74/113 (65%) Query: 36 WLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVL 95 L+ M L++E F + LN ++++IA E + G++N + VHPREV A+ +++A++L Sbjct: 120 LLMEEMRYLKKEYFNIALLNTKHEVIAIENISIGSLNASIVHPREVFVVAIKRSSSAIIL 179 Query: 96 AHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 HNHPSG+ +PS D IT+RLV+A L+ I V DH+I+G N +S E ++ Sbjct: 180 VHNHPSGDPSPSGEDIRITKRLVEAGKLLGIEVLDHIIIGDNVYYSLKEKSMM 232 >UniRef50_A1B298 DNA repair protein RadC n=7 Tax=Bacteria RepID=A1B298_PARDP Length = 162 Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 53/144 (36%), Positives = 88/144 (61%), Gaps = 2/144 (1%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E++++ A + L RHL++ V TS +A ++ L + G + E F VLYL+ +N+LI+ E Sbjct: 21 EQAVVYEARQILLRHLNQNPV-LTSWQAVLDYCALTIRG-DVERFHVLYLDRRNRLISDE 78 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 L GT++ V+PREV++R L NA+A+++ HNHP+G+ PS AD +T+ + A + Sbjct: 79 CLAIGTVDHVPVYPREVLRRCLALNASALIIVHNHPAGDPEPSAADFAMTKEIRNASASL 138 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 + + DH+I G + S G L Sbjct: 139 GVILHDHIITGAGRETSLRARGEL 162 >UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E733_MACCJ Length = 223 Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 51/142 (35%), Positives = 82/142 (57%), Gaps = 1/142 (0%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 ++I+ A++ + H E + S A L+ + + +E F VL LN +N ++ T+ Sbjct: 83 AIIELAIR-MHTHTKETRIKVKSPACAANLLMERLRYMTQEHFIVLSLNTKNIVMHESTI 141 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 F G++N + VHPREV K A+ +AAA+++ HNHPSG+ PS D T+RL++ + I Sbjct: 142 FIGSLNASIVHPREVFKEAVKRSAAAIIVVHNHPSGDPEPSYEDIEATKRLIKCGEIFGI 201 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 V DH+I+G S E G+L Sbjct: 202 DVLDHIIIGDGYYVSIKEKGIL 223 >UniRef50_B1I0K4 DNA repair protein radC-like protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0K4_LYSSC Length = 204 Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 44/136 (32%), Positives = 82/136 (60%) Query: 13 LKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTIN 72 LK ++ + ++ A E+++ M L++E F L+L+ ++++I ET+F G++N Sbjct: 69 LKIMNSERQGKVKSISNASEAAEYVMDEMKNLKQEHFVCLFLDTRSRVIKKETIFIGSLN 128 Query: 73 RTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHL 132 + PRE+++ AL ++AA ++ HNH SG+ PS D +T RL +A L+ + + DH+ Sbjct: 129 SSIASPREIMRLALKYSAAGIICLHNHCSGDSEPSMQDLEVTRRLFEAGDLMGVELIDHI 188 Query: 133 IVGGNQVFSFAEHGLL 148 ++G N+ S E+ LL Sbjct: 189 VIGNNEFTSIRENNLL 204 >UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium RepID=Y547_CLOBA Length = 229 Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 41/108 (37%), Positives = 71/108 (65%) Query: 41 MAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHP 100 M+ L++E +V++LN +N +I + +F G++N + VHPRE+ K A+ ++ +++ HNHP Sbjct: 122 MSLLKQEILKVIFLNTKNIVIGTKDVFKGSLNTSIVHPREIFKEAVNKSSTKIIICHNHP 181 Query: 101 SGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 SG+ TPSK D IT R+ + ++ I++ DH+I+G N S E G + Sbjct: 182 SGDPTPSKEDINITLRIKECGEIMGIQLLDHIIIGKNGFISLKEKGFI 229 >UniRef50_Q4EGF4 DNA repair protein RadC n=7 Tax=Bacilli RepID=Q4EGF4_LISMO Length = 147 Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 48/105 (45%), Positives = 68/105 (64%), Gaps = 1/105 (0%) Query: 45 EREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEV 104 +RE F V+ LN +N ++A G++N + VHPREV K A+ +N A+V+LAH HPSG++ Sbjct: 43 DREVFFVMCLNTKNNVVAVHRCHVGSLNSSIVHPREVFKSAILNNVASVILAHQHPSGDI 102 Query: 105 TPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVF-SFAEHGLL 148 PS D +T+RLV+A L+ I V DHLIV + F S E G + Sbjct: 103 KPSMEDINVTKRLVEAGKLLGIEVLDHLIVNSDNSFTSLKERGYI 147 >UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=C0R2T1_WOLWR Length = 224 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 76/114 (66%) Query: 35 EWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVV 94 ++L +++ L +E FRV+Y+N + +LIA + GT+++T ++ RE+IKRAL + ++V Sbjct: 111 DYLRISIGSLNKENFRVIYMNKKYRLIAEDLQNIGTVDQTPLYVREIIKRALLIGSTSIV 170 Query: 95 LAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++HNHPS + PS +D +T +L +A + I + DH+I+ + FSF E+ LL Sbjct: 171 ISHNHPSRDTQPSNSDISLTRQLAEACQSIGIELIDHIIITFSSYFSFKENRLL 224 >UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobacteria RepID=Y1607_AGRT5 Length = 280 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 53/136 (38%), Positives = 84/136 (61%), Gaps = 4/136 (2%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 S+ QR LK+ R+ G S + ++ MA RE+FR+L+L+ +N LIA E Sbjct: 143 SVSQRMLKSEIRNKQVLG----SWSSVIDYCHAAMAHETREQFRILFLDKRNVLIADEVQ 198 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 GT++ T V+PRE+++RAL ++ A++L HNHPSG+ TPS+AD +T+ ++ + I Sbjct: 199 GQGTVDHTPVYPREIVRRALELSSTALILIHNHPSGDPTPSRADIEMTKTIIDTAKPLGI 258 Query: 127 RVPDHLIVGGNQVFSF 142 V DH+I+G + SF Sbjct: 259 TVHDHIIIGKDGHASF 274 >UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales RepID=Q2G8R8_NOVAD Length = 245 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 47/122 (38%), Positives = 79/122 (64%) Query: 27 FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 ++ +A ++L ++MA L E RVLYLN+QN LI + GT++ + ++ REVI++A+ Sbjct: 124 LSNWQALLDYLHIDMAHLTVERVRVLYLNSQNMLILDHLVSEGTLDESPIYTREVIRKAM 183 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 AAA++L HNHPSG PS+AD +T+++++A L+ + V DH+++G S G Sbjct: 184 DVGAAAMILVHNHPSGSPKPSRADIQVTQKVMEAARLMGMTVHDHIVIGREGHTSLKAQG 243 Query: 147 LL 148 L+ Sbjct: 244 LI 245 >UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales RepID=C6LCB9_9FIRM Length = 231 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 46/125 (36%), Positives = 77/125 (61%) Query: 24 GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIK 83 G FTS +A ++ + + L++E +L + + +L++ +T+ GT+N++ V PRE+ Sbjct: 106 GNTFTSAQAIADYYMEDFRHLQQERVFLLSFDTKGELLSEKTISVGTVNQSCVSPREIFL 165 Query: 84 RALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFA 143 AL A V+L HNHPSG PS DRL+T R+ ++ L++I + DH+I+G + FSF Sbjct: 166 EALSCRAVYVILLHNHPSGNPQPSPEDRLLTMRVHESGKLLEIPLMDHIILGDRRYFSFR 225 Query: 144 EHGLL 148 E G + Sbjct: 226 EEGFI 230 >UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia RepID=B4CZF8_9BACT Length = 231 Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 5/113 (4%) Query: 41 MAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHP 100 M L RE R++ L+ + LI E + G++N + HPREV + AL ++A AV+L HNHP Sbjct: 119 MRALGRESLRLVLLDTKYLLIRVEEISHGSLNESIAHPREVFRPALIYSAYAVILVHNHP 178 Query: 101 SGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQ-----VFSFAEHGLL 148 SG+ TPS AD +T RLVQ L+ IR+ DH+I+G FSF E G++ Sbjct: 179 SGDPTPSSADHQLTRRLVQGAELLQIRLLDHVILGTGDNGRLPYFSFKEAGII 231 >UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5ZRS6_9FIRM Length = 236 Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 47/122 (38%), Positives = 71/122 (58%) Query: 27 FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 F S + + + + E+E + L+NQN L+ L GT+N T + PREV AL Sbjct: 110 FNSPDSIAAYYMEQLRHQEQEIMICMMLDNQNHLLGDTMLSKGTVNATLITPREVYLEAL 169 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 ++A ++L HNHP G PSK D+ ITER+ QA ++ I + DH+I+G ++ SF E G Sbjct: 170 RYHAVNLILIHNHPGGNPAPSKCDKEITERICQAGEMLGINLLDHIIIGDHRYISFREEG 229 Query: 147 LL 148 L+ Sbjct: 230 LM 231 >UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21_RHOBA Length = 319 Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/126 (40%), Positives = 74/126 (58%), Gaps = 4/126 (3%) Query: 23 PGVAFTSTRAAREWLILNMAGLE----REEFRVLYLNNQNQLIAGETLFTGTINRTEVHP 78 P V TST A E+ A L +EEF ++ L+ +++ I + GT++ + VHP Sbjct: 193 PIVKITSTTEATEYCAQKFAYLAGDAVQEEFHIVTLDTKHKPIRTHRITVGTLDSSLVHP 252 Query: 79 REVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQ 138 REV + A+ AAAV+L HNHPSG+ TPS+ D +TERL +A L+ I V DH++V + Sbjct: 253 REVFRPAIRDAAAAVLLVHNHPSGDPTPSREDHAVTERLTEAGKLIGITVLDHIVVAKQR 312 Query: 139 VFSFAE 144 S E Sbjct: 313 CLSLRE 318 >UniRef50_C9KJC8 DNA repair protein RadC n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJC8_9FIRM Length = 158 Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/129 (39%), Positives = 79/129 (61%), Gaps = 6/129 (4%) Query: 18 RHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVH 77 R LH P A ++ +++ + E F V+ ++++++ + + GT+N + VH Sbjct: 27 RTLHSPEDAAEFIKS-----VIDFDTVPCELFIVVPIDSKSKPLCVTVVTKGTLNCSLVH 81 Query: 78 PREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGN 137 PREV + L NAAA + HNHPSG+VTPS+ D+ ITERLV+A ++D+ V DH+IVG N Sbjct: 82 PREVFQPCLLANAAACFVFHNHPSGDVTPSREDKAITERLVKAGHILDVPVLDHIIVGDN 141 Query: 138 QVFSFAEHG 146 +SF G Sbjct: 142 -FYSFRTDG 149 >UniRef50_B5V5B9 RadC n=5 Tax=Firmicutes RepID=B5V5B9_BACCE Length = 168 Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 47/108 (43%), Positives = 67/108 (62%) Query: 41 MAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHP 100 + G +RE F VL L+ +NQ G++N + VHPREV+K A+ NAA++++AHNHP Sbjct: 61 LDGADREYFIVLCLDIKNQPTTINVCHIGSLNSSIVHPREVLKPAIISNAASIIVAHNHP 120 Query: 101 SGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 S + TPS D +T+RL++A +V I V DHLIV S E G + Sbjct: 121 SNDPTPSSEDLEVTKRLIEAGKVVGIEVLDHLIVCEESFVSLKEKGYM 168 >UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QT39_9RHOB Length = 228 Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 47/114 (41%), Positives = 72/114 (63%) Query: 35 EWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVV 94 +++ M LE E+FR L+LN ++ +IA E + GT++ T V+PRE+++RAL A+A++ Sbjct: 115 DYIQATMGYLEIEQFRCLFLNKKHGVIADEVMQEGTVDHTPVYPRELMRRALILQASALI 174 Query: 95 LAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L HNHPSG+ TPS+ D +T +LV + I + DH+IV SF LL Sbjct: 175 LVHNHPSGDPTPSRPDIEMTAQLVDIAKPLGIEINDHIIVARGLAVSFKGMNLL 228 >UniRef50_A8YUM9 DNA repair protein RadC n=9 Tax=Lactobacillus RepID=A8YUM9_LACH4 Length = 207 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 41/113 (36%), Positives = 71/113 (62%) Query: 36 WLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVL 95 +L + G ++EE LY++N N+++A + +F GT+N++ HPRE+ + A+ ++ + + + Sbjct: 95 YLADKLVGHKQEELWALYVDNGNRIVAEKKIFQGTLNKSVAHPREIFRWAVIYDCSGIFI 154 Query: 96 AHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 AHNHPSG++ PS D +T+ L +A ++ I + DH IVG Q S E L Sbjct: 155 AHNHPSGKLIPSSNDFELTKDLYRAAKMMKIDLLDHFIVGQGQYLSMREKELF 207 >UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcus RepID=Y1084_STRS2 Length = 246 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 42/102 (41%), Positives = 65/102 (63%) Query: 45 EREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEV 104 ++E LYLN QNQ+I+ +T+F G++NR+ PRE++ A+ A ++++ HNHPSG V Sbjct: 122 KQEHLVALYLNTQNQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSV 181 Query: 105 TPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 PS+ D L TE L ++ + + + DHLIVG +SF E Sbjct: 182 QPSRNDLLFTENLKESCEKLGLVLLDHLIVGNKDYYSFREES 223 >UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteria RepID=Y3126_ACIAD Length = 271 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 46/135 (34%), Positives = 79/135 (58%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 + L+ + H+ + S+R ++L + G ++E F VL L+++ + + + LF G++N Sbjct: 108 RYLNHYFHQDALNLNSSRLVLDYLRYELLGEKQEVFAVLCLDSELRKLNFKKLFYGSLNA 167 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 + ++ AL +A +V+AHNHP G+ PS AD +T +L QA LV+I++ DH I Sbjct: 168 CNISINHTLRYALQQHACHIVIAHNHPFGKAEPSAADLDLTHQLYQACQLVEIKLLDHFI 227 Query: 134 VGGNQVFSFAEHGLL 148 + + FSFAE LL Sbjct: 228 IAKDGTFSFAERALL 242 >UniRef50_B3JIE2 Putative uncharacterized protein n=10 Tax=Bacteroidales RepID=B3JIE2_9BACE Length = 220 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 54/151 (35%), Positives = 85/151 (56%), Gaps = 4/151 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGV---AFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 +TP + + A++ L + L E V A S+ + + + + EE VL LN+ Sbjct: 68 LTPSRKKVAYAAIE-LYKRLKEGQVESPALLSSNNVYKMMHPVLCDIATEEMWVLLLNSS 126 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++LI + G IN V R ++K+ALY+NA + ++ HNHPSG PS AD +TE + Sbjct: 127 SKLIRKVRISCGGINTAPVDIRVIMKQALYYNAVSFIMVHNHPSGARKPSSADDRLTEAV 186 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A +DIR+ DH+IV GN +S+A+ G L Sbjct: 187 KKAAETLDIRLVDHVIVAGNNYYSYADEGRL 217 >UniRef50_A0LNF4 DNA repair protein RadC n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LNF4_SYNFM Length = 225 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/122 (46%), Positives = 78/122 (63%) Query: 27 FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 F STR A +L + E+F +L LN+ N LI E + G++NRT V PR V++ +L Sbjct: 103 FNSTRGAVSYLSALLCTERSEKFCILALNSTNDLIQMEEIQRGSVNRTAVFPRLVVEASL 162 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 H A AV+LAHNHP G+ PS AD+ +T RL + L +DI V DH+I+ G + +SFAEHG Sbjct: 163 KHRATAVILAHNHPGGDPNPSAADQQLTRRLKRILNDLDIIVHDHIIIAGPRYYSFAEHG 222 Query: 147 LL 148 L Sbjct: 223 GL 224 >UniRef50_Q03R16 DNA repair protein n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03R16_LACBA Length = 220 Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 46/112 (41%), Positives = 71/112 (63%) Query: 37 LILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLA 96 L+ ++ L +E+ VL L+ Q+++I +T+F GT+N VHPRE+ + A+ AA V++A Sbjct: 95 LMDDLRYLLQEQLEVLALDAQHRIIERQTVFQGTLNSCPVHPREIFRVAVMSGAATVIVA 154 Query: 97 HNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 HNHPSG+ PS +DR +RL L+ I + D +VG + FSF E G+L Sbjct: 155 HNHPSGQPQPSTSDRAFMQRLAACGQLMGIPLLDGFVVGLHSYFSFKEAGIL 206 >UniRef50_A8ZYJ4 DNA repair protein RadC n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYJ4_DESOH Length = 167 Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 44/102 (43%), Positives = 71/102 (69%), Gaps = 1/102 (0%) Query: 47 EEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTP 106 E LYL+ +N+++A E +FTG+++ T V+PRE+IKR + ++AVV+ HNHP+G+ P Sbjct: 50 ETLYCLYLDTKNRILAMEKMFTGSLSSTAVYPREIIKRVIALKSSAVVITHNHPTGDPGP 109 Query: 107 SKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 S D IT RL+ AL +++ + DH+IV G +SFA+ G++ Sbjct: 110 SVEDTRITIRLLVALKSMNVDLHDHIIV-GEGYYSFADAGVI 150 >UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes RepID=Y413_FLAJ1 Length = 229 Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 44/105 (41%), Positives = 67/105 (63%) Query: 44 LEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGE 103 L EEF VL+LNN N++I+ L G I T V R V K L + A ++L HNHPSGE Sbjct: 125 LPHEEFWVLFLNNSNKVISKAQLSKGGIAGTIVDVRLVFKLGLENGATGLILCHNHPSGE 184 Query: 104 VTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + PS+AD+ IT+++ A ++D+++ DHLI+ + +SF + G+ Sbjct: 185 LNPSQADKQITKKIKTAGEILDVKILDHLIITETKYYSFVDEGIF 229 >UniRef50_C5D8D2 DNA repair protein RadC n=4 Tax=Firmicutes RepID=C5D8D2_GEOSW Length = 169 Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 45/104 (43%), Positives = 68/104 (65%) Query: 45 EREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEV 104 +RE+F V+ L+ +NQ A G++N + VHPREV K A+ N+A++++AHNHPS + Sbjct: 66 DREKFVVVCLDTKNQPTAINICHIGSLNSSIVHPREVFKSAILSNSASIIVAHNHPSSDP 125 Query: 105 TPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 TPS+ D +T+RLV+A +V I + DHLIV + S E G + Sbjct: 126 TPSREDIEVTKRLVEAGRIVGIELLDHLIVCEEKFVSLKEKGYI 169 >UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHA4_DESAA Length = 265 Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 56/148 (37%), Positives = 84/148 (56%), Gaps = 9/148 (6%) Query: 8 LIQRALKTLDRHLHEPGV------AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLI 61 L+ RA+ +HL V A +S+ L + E F ++YL+ QN+++ Sbjct: 105 LLMRAVAK--KHLESEAVLASLQEAVSSSEELYNLLNFQFENKKNECFFIVYLDVQNRIL 162 Query: 62 AGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQAL 121 ET F G++N + V+ RE+I +AL A+AV+LAHNHPSG PSK D +T L A Sbjct: 163 NMETPFEGSLNASHVYTRELIDKALKTGASAVLLAHNHPSGNTKPSKNDIQLTYTLFTAF 222 Query: 122 GLVDIRVPDHLIVGGN-QVFSFAEHGLL 148 V+I + +HLI+G + +SFA+HG L Sbjct: 223 RSVEIHLLEHLIIGKQGEYYSFADHGYL 250 >UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium RepID=Y909_FUSNN Length = 232 Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 44/110 (40%), Positives = 70/110 (63%), Gaps = 1/110 (0%) Query: 40 NMAGLER-EEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHN 98 N G E E+F V+YL++ N++I E GT++R+ V+PRE+ K+ + NA +++LAHN Sbjct: 123 NKIGYEEIEKFYVIYLSSSNEVIEFEENSVGTLDRSSVYPREIYKKVINLNAKSIILAHN 182 Query: 99 HPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 HPS +TPSK+D +T + + L + +H+I+ N FSF E GL+ Sbjct: 183 HPSDNITPSKSDIELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232 >UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magna RepID=Y357_FINM2 Length = 223 Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 9/139 (6%) Query: 4 GERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAG 63 G R +++A+ + L++P + E + + E F L L+ +N++I+ Sbjct: 88 GRRLSLRKAMDSF--SLNDPD-------SVAEIFCNEIGSCDVENFYALLLDTKNRIISK 138 Query: 64 ETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGL 123 E + GTIN++ VHPREV K A+ A +++L HNHPSG + PS AD +T+RL + L Sbjct: 139 ELISKGTINQSIVHPREVFKSAIKKGANSIILVHNHPSGSLIPSNADIEVTKRLDKVGDL 198 Query: 124 VDIRVPDHLIVGGNQVFSF 142 V I+V DH+IV N S Sbjct: 199 VGIQVLDHIIVSSNDSLSM 217 >UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YL92_THEYD Length = 222 Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 44/104 (42%), Positives = 64/104 (61%) Query: 45 EREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEV 104 ++E F L L+ + LI T+F GT+N + VHPRE+ A+ AA ++ HNHPSG+ Sbjct: 116 KQEYFLSLTLDGASNLIQKRTVFIGTLNHSIVHPREIFADAISDRAAGIIFVHNHPSGDS 175 Query: 105 TPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 PSK D IT+RLV+ ++ I V DH+I+ N +SF G+L Sbjct: 176 EPSKQDIEITKRLVEIGKMLGIEVIDHIIISKNGYYSFQAEGML 219 >UniRef50_C8PDJ9 DNA repair protein RadC n=1 Tax=Lactobacillus iners DSM 13335 RepID=C8PDJ9_9LACO Length = 205 Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 49/148 (33%), Positives = 84/148 (56%), Gaps = 4/148 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 ++ G L+ R +K + R E +F S+ +L ++G +E +Y++ +N++ Sbjct: 62 LSLGAELLLNR-VKAIKREKME---SFCSSSQIGYYLSNVLSGCYQEHLMAVYVDVKNKI 117 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 IA + +F GT+N+ +HPR++ + A+ +NAA LAHNHPS ++TPS+ D +T+++ Sbjct: 118 IAEKVIFKGTLNQAIIHPRDIFRWAIIYNAAGFFLAHNHPSEDLTPSEQDIQVTKKISSV 177 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + IR DH IV SF E LL Sbjct: 178 SECMGIRFLDHFIVNTGNYLSFKEMELL 205 >UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9S4_9DELT Length = 227 Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 44/102 (43%), Positives = 68/102 (66%) Query: 47 EEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTP 106 EEF +++++N++IA E + GT++ T V PRE++ AL AAA++LAHNHP G+ TP Sbjct: 126 EEFWAAFMDSKNRVIAWEQVSKGTVDATPVFPREIMVTALRLEAAALILAHNHPGGDPTP 185 Query: 107 SKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 S+ D +T R+ + IR+ DH+IV ++ +SF EHG L Sbjct: 186 SREDLDLTRRIRDTAQGLGIRILDHIIVTDHEYYSFNEHGRL 227 >UniRef50_B4RG10 DNA repair protein RadC n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RG10_PHEZH Length = 256 Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 46/103 (44%), Positives = 64/103 (62%) Query: 46 REEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT 105 RE FRV++L+ + E L GT++ V+ REV++ AL +AAA+VL HNHPSG+ T Sbjct: 153 RESFRVIFLDASGAWSSDEELGRGTVDHAPVYVREVMREALRRDAAALVLVHNHPSGDPT 212 Query: 106 PSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 PS AD +T + A + + V DHL+VG + V SF GLL Sbjct: 213 PSAADVQVTSEIAAAASALGMSVKDHLVVGSHGVASFQALGLL 255 >UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales RepID=C9L5T8_RUMHA Length = 231 Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 75/125 (60%) Query: 24 GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIK 83 G++F + ++ + + E+E + L+ +N L+ E +F GT+N + +PRE+ Sbjct: 107 GLSFRHPASIADYYMEQLRHEEQELLICMMLDTKNHLLGDEMIFKGTVNSSLANPREIFL 166 Query: 84 RALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFA 143 A+ ++A ++L HNHPSG+ TPS+AD T+R+ +A L+ I + DH+I+G + SF Sbjct: 167 SAVSYHAVGILLVHNHPSGDCTPSQADVDFTQRVKEAGELLGIPLLDHIIIGDCKYLSFR 226 Query: 144 EHGLL 148 E G+ Sbjct: 227 EQGIF 231 >UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonadales RepID=Y523_GEOLS Length = 230 Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/138 (38%), Positives = 79/138 (57%), Gaps = 8/138 (5%) Query: 11 RALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGT 70 R L+TL+R FTS ++ + +E F L L+ +N++ + G+ Sbjct: 101 RRLETLER--------FTSPAQVFDFFHHELRDNRKELFLTLLLDGKNRITRKVQVSEGS 152 Query: 71 INRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPD 130 +N++ VHPREV A+ +AAAV+ HNHPSG+ PS+ D IT RL +A ++ I+V D Sbjct: 153 LNQSIVHPREVFAPAVRESAAAVIFIHNHPSGDPAPSREDHEITRRLNEAGEILGIKVLD 212 Query: 131 HLIVGGNQVFSFAEHGLL 148 H+I+G FSF E GLL Sbjct: 213 HIIIGDGAYFSFVESGLL 230 >UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales RepID=Y894_PORGI Length = 227 Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 49/124 (39%), Positives = 76/124 (61%), Gaps = 1/124 (0%) Query: 26 AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRA 85 + T +R A + + L +EE VL LN ++I+ E L G ++ T R ++ +A Sbjct: 104 SITDSRMAYRTISPFLTDLPQEEMWVLLLNQSGKIISMENLSRGGVSETSADVRLIMHKA 163 Query: 86 LYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGN-QVFSFAE 144 + H A+A++LAHNHPSG V PS+ D +T+R+ +A L+ R+ DHLI+G + FSFA+ Sbjct: 164 VSHLASAIILAHNHPSGTVRPSEQDIQLTQRVQKAATLLGFRLNDHLIIGDDGAYFSFAD 223 Query: 145 HGLL 148 GLL Sbjct: 224 EGLL 227 >UniRef50_B5CP31 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B5CP31_9FIRM Length = 168 Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 51/137 (37%), Positives = 78/137 (56%), Gaps = 6/137 (4%) Query: 18 RHLHEPGV----AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 R + EP + S +A E + ++ +RE F +L + N Q+I + GTIN Sbjct: 21 RLVREPSLYSEQILDSPQAVVELMAKELSQYDREVFCILNMKNNGQVINMNLVSVGTINA 80 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 + V PREV K ++ NA+A++ HNHPSG V PSK D ++T +L + L+ I + DH+I Sbjct: 81 SLVIPREVFKSSILANASAIIGLHNHPSGNVKPSKEDMIVTRKLQKCGQLLGIELLDHII 140 Query: 134 VGGN--QVFSFAEHGLL 148 VGG ++ SF E +L Sbjct: 141 VGGTNGKMLSFREEKML 157 >UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZ93_ERYRH Length = 235 Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/122 (39%), Positives = 71/122 (58%), Gaps = 2/122 (1%) Query: 23 PG--VAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPRE 80 PG + +S WL L + E+E FRVL+L+ QN LI LF GT +++ VHPR+ Sbjct: 104 PGEKIKLSSCDRIVRWLNLEIGFEEQELFRVLFLSTQNNLIRYLDLFKGTADKSLVHPRD 163 Query: 81 VIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVF 140 V + A+ NA+ +VL HNHP G ++ S+AD +T L++ ++ I V DH+IV Sbjct: 164 VFREAVRCNASRIVLVHNHPGGSLSASEADVEVTRALIEVGMMIGIEVVDHIIVTSTNSV 223 Query: 141 SF 142 S Sbjct: 224 SL 225 >UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus lactis RepID=Y1515_LACLM Length = 227 Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 3/116 (2%) Query: 32 AAREW---LILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYH 88 +++E+ L M E+E YL+ QNQ+I +T+F G N PRE++ A+ + Sbjct: 106 SSKEYGMSLAFEMQNFEQEHLTATYLDGQNQIIEKKTIFIGAFNHATASPREILYHAVKN 165 Query: 89 NAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAE 144 + +++AHNHPSG + PS+AD++ T+++ A + I DH+IVG +SF E Sbjct: 166 LSVGLLVAHNHPSGNLQPSQADKIFTKKIKNACDNIGINFIDHIIVGAGNYYSFRE 221 >UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepID=C4V569_9FIRM Length = 225 Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/103 (46%), Positives = 67/103 (65%) Query: 46 REEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT 105 RE F VL L+ +N+++ + TGT+ T VHPREV + A+ +AA +++AHNHPSG+ Sbjct: 123 REHFFVLPLSAKNEVLMIADVSTGTLTNTLVHPREVFEPAIRCSAAHIIIAHNHPSGDPA 182 Query: 106 PSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 PS D +T L +A L+ I V DH+IV + FSFAE GLL Sbjct: 183 PSAEDHRLTRSLHEAGALLGIPVADHVIVARDGFFSFAEAGLL 225 >UniRef50_B9ECC3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9ECC3_MACCJ Length = 150 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 44/103 (42%), Positives = 67/103 (65%) Query: 46 REEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT 105 RE+F ++ LN +N++ T+F GTIN + +HPREV + A+ ++ A+++LAH HPS + T Sbjct: 48 REKFLLVGLNTKNEITFVYTVFIGTINMSPIHPREVFQVAILNSCASIILAHCHPSDDPT 107 Query: 106 PSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 PS DR T+R + L+ I V DH+IV + FSF E+ L Sbjct: 108 PSSEDREATKRFEECGELLGIPVLDHIIVTESSYFSFRENNLF 150 >UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLJ1_9FIRM Length = 233 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 70/122 (57%) Query: 27 FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 F+S R ++ + +M RE ++++LN + +LI + GTI+ V PRE+ A Sbjct: 110 FSSPRTIADYYMEDMRHRTREILKLIFLNTRCRLIGECNVSEGTIDSALVSPRELFIEAF 169 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 NA ++L HNHP G+ TPS+ D +IT R+ +A L+ IR+ DH+++G N S E G Sbjct: 170 KRNAYGIILLHNHPGGDPTPSREDVMITRRIYEAGELLGIRLFDHIVIGDNCFVSMKEKG 229 Query: 147 LL 148 Sbjct: 230 FF 231 >UniRef50_B0MF12 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MF12_9FIRM Length = 282 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 47/116 (40%), Positives = 67/116 (57%) Query: 33 AREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAA 92 A + L+ ++RE F VL L Q+I GT+N + PRE+ K ++ NAA+ Sbjct: 24 AVQLLLKEFDSVDRELFFVLNLKTNGQVINVNIASMGTLNSCILSPREIFKASILSNAAS 83 Query: 93 VVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 V+L HNHPSG+ TPSK D L+T+RLV L+ I V DH+I+G S E ++ Sbjct: 84 VILMHNHPSGDCTPSKQDVLMTKRLVACGELIGITVLDHVILGKETYLSMKEANMM 139 >UniRef50_Q6MR78 Putative DNA repair protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MR78_BDEBA Length = 170 Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 41/102 (40%), Positives = 64/102 (62%) Query: 47 EEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTP 106 EE V+ L++Q L+ E LF GT++ +HPR++ + + NA++ +LAHNHPS V P Sbjct: 55 EELWVIALDSQMNLVLKEMLFRGTVDFCMIHPRDIFRCLVQANASSFILAHNHPSQNVLP 114 Query: 107 SKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 S+ D ++T R+ Q + +I + DHL+V N FS A+HG Sbjct: 115 SEQDLILTRRIHQLAQMFEIPLNDHLVVCENNYFSMADHGYF 156 >UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9M0_9BACT Length = 227 Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 2/139 (1%) Query: 10 QRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTG 69 Q K L++ + V +T+ +L + + G ++E F VL+LN QN L+ + + G Sbjct: 91 QLCTKYLEQKARDVDVLDNTTKIV-NFLRMKLGGGKKETFMVLFLNAQNHLLCFDVI-PG 148 Query: 70 TINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVP 129 T++R V+ REV+++A+ A AV+LAHNHP+G PS AD +T + Q L V I + Sbjct: 149 TVDRATVYAREVLEKAINTKATAVILAHNHPTGICEPSPADIKLTNTIRQVLQPVGILLH 208 Query: 130 DHLIVGGNQVFSFAEHGLL 148 DH+IV + FSFA +L Sbjct: 209 DHIIVAPSCYFSFASRRML 227 >UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=C5TNC6_NEIFL Length = 224 Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 52/125 (41%), Positives = 74/125 (59%), Gaps = 2/125 (1%) Query: 25 VAFTSTRAAREWLILNMAGLEREEFRV-LYLNNQNQLIAGETLFTGTINRTEVHPREVIK 83 + ++ ++ ++L L++ G E+ E V L LN QNQLIA L GT+ V+ RE++K Sbjct: 101 IILSNPKSVADYLRLHL-GHEKIEVSVALLLNRQNQLIAVRELSRGTVAENTVYIREIVK 159 Query: 84 RALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFA 143 AL A +++LAHNHP PS++D TERL QAL LVDI + DH IV + S Sbjct: 160 LALDEYADSLILAHNHPGSSARPSESDVQFTERLKQALSLVDITLLDHFIVTAKETCSLR 219 Query: 144 EHGLL 148 E G + Sbjct: 220 EQGYM 224 >UniRef50_C0GR82 DNA repair protein RadC n=2 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GR82_9DELT Length = 145 Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 1/126 (0%) Query: 23 PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVI 82 P +S AA L L + E F VL+++N+N++I + + GT+++ V PRE+I Sbjct: 21 PDYVLSSPEAAVIQL-LPFRKKKTENFVVLFVDNKNRMICKKVVAKGTVDQIPVFPREII 79 Query: 83 KRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSF 142 + A+ A+ ++L HNHP G PSK DR +T ++ + + IRV DH+I+ + FSF Sbjct: 80 RHAILKQASGIILGHNHPGGASEPSKQDRELTSKIKRIAMELGIRVLDHIIICDSGHFSF 139 Query: 143 AEHGLL 148 E+G L Sbjct: 140 QENGYL 145 >UniRef50_C3DWR5 DNA repair protein RadC n=1 Tax=Bacillus thuringiensis serovar sotto str. T04001 RepID=C3DWR5_BACTS Length = 154 Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 49/127 (38%), Positives = 72/127 (56%), Gaps = 1/127 (0%) Query: 23 PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVI 82 P T A E + +RE F V+ LN QN+++A G++N + VHPR+V Sbjct: 27 PRKKITGPDTAAEIATYFIGDDDREIFLVMCLNTQNEVVAVHRCHVGSLNSSVVHPRDVF 86 Query: 83 KRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVG-GNQVFS 141 K A+ +N+ ++V+AH HPSG V PS AD+ +++RL A L+ I V D LIV + +S Sbjct: 87 KSAILNNSFSIVVAHQHPSGMVLPSDADKDVSKRLYDAGKLIGIEVLDSLIVNDAGRFYS 146 Query: 142 FAEHGLL 148 E G L Sbjct: 147 LREKGYL 153 >UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin514 RepID=B9XSW5_9BACT Length = 244 Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 44/91 (48%), Positives = 64/91 (70%) Query: 45 EREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEV 104 E E F+V+ LN + +LI E + GT++ +HPREV K A+ NA+A+VLAHNHPSG+ Sbjct: 134 EVENFQVVLLNTRRKLIRVENITQGTLDTLLIHPREVFKSAISANASAIVLAHNHPSGDP 193 Query: 105 TPSKADRLITERLVQALGLVDIRVPDHLIVG 135 TPS+AD +T L++A L+ I + DH+I+G Sbjct: 194 TPSEADIKVTRDLIRAGQLLKIEILDHIILG 224 >UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae RepID=Y1225_NEIG2 Length = 225 Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 48/107 (44%), Positives = 65/107 (60%), Gaps = 1/107 (0%) Query: 43 GLEREEFRV-LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPS 101 G E+ E V L LN QNQLIA L GT+ ++ RE++K AL A ++++AHNHP Sbjct: 118 GQEKVEVSVALLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPG 177 Query: 102 GEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 G PS+ D + T RL QA+ LVD+ + DH IV V SF + GL+ Sbjct: 178 GSPEPSQEDIMFTRRLAQAMSLVDVSLLDHFIVTSQTVRSFRQLGLM 224 >UniRef50_Q0GNI5 Smu18B n=1 Tax=uncultured organism RepID=Q0GNI5_9ZZZZ Length = 154 Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 56/122 (45%), Positives = 78/122 (63%), Gaps = 3/122 (2%) Query: 30 TRAAREWLILNMAGLEREE---FRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 R+ R+ ++ L REE F V+ LN Q+++IA + + G N + VHPREV + A+ Sbjct: 33 VRSPRDAVVALAPRLAREEVEVFLVIALNAQHRMIALQEVTRGIQNCSLVHPREVFRIAI 92 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 AAA+++AHNHPSG+ PS DR +TE+LV A L+D+ V DH+IVG SFAE G Sbjct: 93 AIGAAAIIVAHNHPSGDPAPSADDRAVTEQLVAAGRLLDLPVHDHIIVGAGSYTSFAEAG 152 Query: 147 LL 148 LL Sbjct: 153 LL 154 >UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B8H5_9BACI Length = 228 Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 44/104 (42%), Positives = 69/104 (66%) Query: 45 EREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEV 104 ++E F VL L+ ++QLI+ + ++ GTI+ VHPREV + AL +AA +++AH HPSG Sbjct: 125 DQETFVVLALDTKHQLISRKEIYKGTIDAAIVHPREVFRFALNKSAAHIIVAHQHPSGNC 184 Query: 105 TPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +PS+ D +T+RL + + I + DH+IVG N+ FS + G L Sbjct: 185 SPSRDDIEVTKRLRKVGEEIGIPLSDHIIVGRNKYFSMKKQGHL 228 >UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MFA0_RHOM4 Length = 245 Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 46/105 (43%), Positives = 64/105 (60%) Query: 44 LEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGE 103 L+RE F+++ LN N +IA T+ G + + V PR V +RA+ NAA ++ HNHPSG Sbjct: 140 LKREVFKIVLLNTANYIIADYTISEGGLAASIVEPRAVFQRAILDNAAGIICLHNHPSGN 199 Query: 104 VTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 PS D IT +LV+A L+ I V DH+I+ G S AE GL+ Sbjct: 200 PEPSAEDIRITRQLVEAGRLLGIPVHDHIIIAGTTYTSLAERGLM 244 >UniRef50_A1BGW3 DNA repair protein RadC n=2 Tax=Chlorobium RepID=A1BGW3_CHLPD Length = 166 Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 4/123 (3%) Query: 30 TRAAREWLILNMAGLE---REEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 T AA I N GL EE V +L+ +N + + + GT+N + +HPREV + A+ Sbjct: 43 TVAADICSICNTIGLPDLPHEELHVFFLSTKNYITGTQLVSRGTLNASLIHPREVFRGAI 102 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGN-QVFSFAEH 145 NA A++L HNHPSG PS AD+ +T+++ + ++ I + DH+I+G N FSF + Sbjct: 103 LANANAIILVHNHPSGNPEPSNADKQVTKQIRSSADIIGIELLDHVIIGSNGNHFSFRQE 162 Query: 146 GLL 148 GL Sbjct: 163 GLF 165 >UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34E02 Length = 243 Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 71/123 (57%) Query: 26 AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRA 85 +F + + + +M +E+EE ++ N +N LI LF GT+N + RE+ A Sbjct: 121 SFDGPESIAAFYMEDMRHMEQEELHLMMFNTKNMLIRESCLFRGTVNASVASAREIFIEA 180 Query: 86 LYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEH 145 L ++A + L HNHPSG+ +PS D +T ++ QA L+ + + DH+I+G N FSF E Sbjct: 181 LRYHAVRLALVHNHPSGDPSPSGEDIRLTRQVAQAGELLGVTLLDHVIIGDNSYFSFKER 240 Query: 146 GLL 148 G++ Sbjct: 241 GII 243 >UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYN9_9FIRM Length = 230 Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 43/104 (41%), Positives = 61/104 (58%) Query: 45 EREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEV 104 ++E F + LN +IA E + G + HPREV K A+ A++V+L HNHPSG V Sbjct: 121 KKENFYAVMLNTAKHVIAKERISIGGLACAYAHPREVFKSAIKKAASSVILVHNHPSGCV 180 Query: 105 TPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 TPS D LIT+RL+ A ++ I V DH+I+G S + G + Sbjct: 181 TPSDEDVLITKRLINAGRIIGIEVIDHIIIGNENYLSMKKEGYI 224 >UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organisms RepID=A5FRP1_DEHSB Length = 228 Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 45/104 (43%), Positives = 66/104 (63%) Query: 45 EREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEV 104 ++E F L L+ +++LI + G++ + VHPREV K AL +AA+V+LAHNHPSG+ Sbjct: 125 KKEYFFCLMLDVKSRLIRVGHISVGSLEESVVHPREVFKEALSASAASVILAHNHPSGDT 184 Query: 105 TPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 PS D ++ RL +A G++ I V DH+I+GG S GLL Sbjct: 185 EPSHDDIGLSARLREAGGIMGIEVLDHIIIGGQSFTSLKRQGLL 228 >UniRef50_C0GE80 DNA repair protein RadC n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GE80_9FIRM Length = 189 Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 51/140 (36%), Positives = 79/140 (56%), Gaps = 2/140 (1%) Query: 11 RALKTLDRHLHEPG-VAFTSTRAAREWLILNMAGLEREEFRV-LYLNNQNQLIAGETLFT 68 +A+ L + L EP + T A + L EE+ V L+LN +N+++ T+ Sbjct: 50 KAVFDLSKALLEPDDTSITIQSPADVFENFKYLALHEEEYLVALFLNTKNKILQHTTISK 109 Query: 69 GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRV 128 GT+N + +HPREV A+ A+VV+ HNHPSG+ TPS+ D IT+RL +A ++ I + Sbjct: 110 GTLNTSLIHPREVFAPAIRIKCASVVILHNHPSGDPTPSREDIDITKRLKEAGKIIGIEL 169 Query: 129 PDHLIVGGNQVFSFAEHGLL 148 DH+++G S E LL Sbjct: 170 LDHIVIGNKGFVSLREKSLL 189 >UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M9C6_CAPOD Length = 225 Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 47/105 (44%), Positives = 64/105 (60%) Query: 44 LEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGE 103 L EEF VLYLN+ N++I LF+G I T V R + K AL A A++L HNHPSG Sbjct: 121 LPHEEFWVLYLNSTNRVIHKARLFSGGITHTTVDVRLLFKTALEQGAIALILVHNHPSGS 180 Query: 104 VTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 TPSK D +T+R+ A ++DI++ DH+IV + SF + L Sbjct: 181 TTPSKEDIELTQRVKTAGEMLDIKLLDHVIVTEKEYLSFLDERLF 225 >UniRef50_Q0F0W4 DNA repair protein RadC n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0W4_9PROT Length = 261 Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 41/113 (36%), Positives = 69/113 (61%) Query: 34 REWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAV 93 R +L L + G E F ++ + Q++L+ + LF GT++RT V+PR ++KRAL +A + Sbjct: 147 RAYLRLLVQGRGMECFGAMFTDQQHRLLTTQILFEGTVDRTAVYPRNLMKRALELDARGM 206 Query: 94 VLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 +L HNHP G S D +T R+ +A +++++ DH ++ +V SF EHG Sbjct: 207 ILFHNHPGGTPHASNEDIELTRRMAEACAPLELKILDHFLIADKEVLSFREHG 259 >UniRef50_A4ITX8 DNA repair protein RadC n=1 Tax=Geobacillus thermodenitrificans NG80-2 RepID=A4ITX8_GEOTN Length = 126 Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 8/123 (6%) Query: 27 FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 F R ++WL ++ + LN +N+++A G++N + VHPREV K A+ Sbjct: 10 FLCDRTLQKWLNFKLSN-------TMCLNTKNEVVAVHRCHIGSLNASIVHPREVFKAAI 62 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVF-SFAEH 145 +NAA++++AH HPSG+VTPSK D +T+RL +A ++ I V DHL++ + S E Sbjct: 63 LNNAASIIVAHQHPSGDVTPSKEDVEMTKRLAEAGRILGIEVLDHLVINYKAEYTSLKER 122 Query: 146 GLL 148 G Sbjct: 123 GFF 125 >UniRef50_A9BIK5 DNA repair protein RadC n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BIK5_PETMO Length = 222 Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 67/104 (64%) Query: 40 NMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNH 99 +M L E R ++L+++ +I + + GT+N + HPR++ + A+ +NA + +L HNH Sbjct: 111 DMIYLSTETVRAIFLDSKLHIITIKDISNGTVNMSIAHPRDIFREAIMYNAVSFILVHNH 170 Query: 100 PSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFA 143 PSG+ TPS DR IT++++ + ++ I + DH+I+G + FSF Sbjct: 171 PSGDPTPSMHDRDITKKIMDSGEILGINMNDHIIIGKDSYFSFT 214 >UniRef50_A9KR89 DNA repair protein RadC n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KR89_CLOPH Length = 156 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 35/80 (43%), Positives = 55/80 (68%) Query: 69 GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRV 128 GT+N + + PRE+ RAL A +++ HNHPS ++TPSK D L+TE++ QA ++ + + Sbjct: 77 GTVNSSLIMPREIFIRALLSGAVGIIIVHNHPSSDITPSKQDLLVTEKIAQAGNMIGVEL 136 Query: 129 PDHLIVGGNQVFSFAEHGLL 148 DH+I+GGN+ S E G+L Sbjct: 137 LDHIIIGGNEYCSLKEMGVL 156 >UniRef50_Q2S042 UPF0758 protein SRU_2338 n=1 Tax=Salinibacter ruber DSM 13855 RepID=Y2338_SALRD Length = 233 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 44/105 (41%), Positives = 67/105 (63%) Query: 44 LEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGE 103 L++E F+V++LN N +I T+ G ++ + V PR V ++A+ +AAAV+ HNHPSG Sbjct: 128 LDKEVFKVVHLNTANVIIGDYTVSEGGLSSSVVEPRGVFEQAILDDAAAVICLHNHPSGN 187 Query: 104 VTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 PS+ D IT +L +A G + I V DHLI+ G + S AE G++ Sbjct: 188 PEPSREDIRITRQLAEAGGTMGIPVHDHLIIAGTKHTSLAERGVI 232 >UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMV6_9DELT Length = 226 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 40/102 (39%), Positives = 64/102 (62%) Query: 47 EEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTP 106 EEF + ++N+N+LI E + GT+++ V PRE++ AL A+ V+L HNHP G+ P Sbjct: 125 EEFWAIMVDNKNRLIDFEKMSRGTVDQAPVFPREILTVALEKRASGVILLHNHPGGDPHP 184 Query: 107 SKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 S DR +T ++ + + +R+ DH+I+ + FSF EHG L Sbjct: 185 SFQDRELTRKIREVSTALGVRLLDHVIISEDSFFSFQEHGFL 226 >UniRef50_Q0FHF8 DNA repair protein RadC n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FHF8_9RHOB Length = 168 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/148 (37%), Positives = 81/148 (54%), Gaps = 4/148 (2%) Query: 4 GERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAG 63 E I A L RH V S ++L LN E FRVL L+ +N+LI Sbjct: 20 AEIETIDAARDILRRHARATAV-LQSWTMLTDYLALNAVRERVEVFRVLLLDRKNKLIRD 78 Query: 64 ETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGL 123 + + G+I+ V+ EV++ AL +A+A++L HNHPSG+ PS+AD +T ++V A + Sbjct: 79 KIMSRGSIDHVPVYVSEVMRSALVLDASALILCHNHPSGDPQPSQADIDMTRKIVDACRV 138 Query: 124 VDIRVPDHLIVGGNQ---VFSFAEHGLL 148 +DI + DHLIVG + FS G+L Sbjct: 139 MDITLHDHLIVGFGREQAAFSMRAAGML 166 >UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A699_NATTJ Length = 241 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 42/98 (42%), Positives = 63/98 (64%) Query: 46 REEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT 105 RE F + LN ++ L+ + + G++N T VHPREV RA+ +A V+L HNHPSG+ Sbjct: 139 REHFLAVMLNTKSYLLKIDLISIGSLNATIVHPREVFNRAIRASACGVILVHNHPSGDPE 198 Query: 106 PSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFA 143 PS+ D +T RLV A L+ I + DH+I+G + +SF+ Sbjct: 199 PSQDDIKLTNRLVAAGDLLGIPIMDHVIIGHQKFYSFS 236 >UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon GZfos29E12 RepID=Q64AS5_9ARCH Length = 403 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 38/100 (38%), Positives = 68/100 (68%) Query: 36 WLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVL 95 + + + ++E F L L+++N+LI + + GT++ + VHPREV K A+ ++AA V+L Sbjct: 292 YFVDELKDKKKEHFYALLLDSKNKLIKKDLVSVGTLDNSLVHPREVFKEAIKNSAAGVIL 351 Query: 96 AHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVG 135 HNHPSG+ PS+ D IT+++ +A +++I+V DH+I+ Sbjct: 352 VHNHPSGDPEPSENDVEITQKIAKAGNILNIKVLDHVIIA 391 >UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUL4_9BACT Length = 214 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 43/105 (40%), Positives = 65/105 (61%) Query: 44 LEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGE 103 ++ EE LYLN N+++ + + G + T V R VIKRAL A ++L HNHPSG Sbjct: 109 MKHEECWCLYLNTGNRIVERQRVSQGGVQATVVDHRLVIKRALELLATQIILVHNHPSGA 168 Query: 104 VTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 PS+ D+++T+++ +A L DIR+ DHLI+ +SF + GLL Sbjct: 169 ALPSEQDKILTKKIAEAAALFDIRLLDHLIIARGGEYSFRQSGLL 213 >UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYP9_ABIDE Length = 240 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 46/120 (38%), Positives = 75/120 (62%), Gaps = 1/120 (0%) Query: 28 TSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALY 87 T+ + ++ ++ M + E +L L+ + +LI T+ GTIN++ + PREV +AL Sbjct: 109 TAAKISKRYM-EEMRHFKEEHVVLLLLDIKCRLIKELTISIGTINQSFLRPREVFIQALK 167 Query: 88 HNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGL 147 + A +VL HNHPSG+ TPSKAD ++T+++++ LV I + DH+I+G SF E GL Sbjct: 168 YEAVNLVLIHNHPSGDPTPSKADIIVTDKILEVSELVGIPLVDHIIIGDCCYVSFREKGL 227 >UniRef50_B6AT60 DNA repair protein RadC n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AT60_9RHOB Length = 253 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/128 (44%), Positives = 80/128 (62%), Gaps = 2/128 (1%) Query: 21 HEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPRE 80 H P + +S A + ++A E EEF VL+LN +N LIA ETL GT++ V+PRE Sbjct: 128 HRPLI--SSWDAVLTYCRTSLAHKETEEFHVLFLNRRNMLIADETLGVGTVDHVPVYPRE 185 Query: 81 VIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVF 140 V+KRAL N+ A++L HNHPSG+ +PS +D +T+ + QA + I + DHLI+G Sbjct: 186 VLKRALELNSCAIILVHNHPSGDPSPSSSDIEMTKLIKQAADSLSITLHDHLIIGATGET 245 Query: 141 SFAEHGLL 148 SF GLL Sbjct: 246 SFVSEGLL 253 >UniRef50_Q4UJX8 DNA repair protein RadC n=1 Tax=Rickettsia felis RepID=Q4UJX8_RICFE Length = 155 Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 44/103 (42%), Positives = 69/103 (66%), Gaps = 4/103 (3%) Query: 6 RSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGET 65 R LI R LK + +++ +A S + ++L +NM + E+FR+L+LN +N LIA E Sbjct: 53 RELINRVLKQ--KIINKNIIA--SWSSLIDYLKVNMGNMRLEQFRILFLNKKNILIADEV 108 Query: 66 LFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSK 108 L GTI++ V+PRE+IKRAL++ A++++L HNHPSG + K Sbjct: 109 LSQGTIDQAAVYPREIIKRALFNEASSLILVHNHPSGALNLQK 151 >UniRef50_B1H050 DNA repair protein RadC n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H050_UNCTG Length = 229 Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 76/122 (62%) Query: 27 FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 +S + +++LI ++G E+F + LN+ N++ + +GT+N++ + PR++ + AL Sbjct: 108 LSSPKNVKDYLISTLSGENIEKFYAILLNSGNRVTDCLEIESGTVNKSLLIPRKIAEIAL 167 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 AA+VV+AHNHP G + PS+ D T + +AL ++I + DH+I+ N FSF E+ Sbjct: 168 KCRAASVVIAHNHPGGTLKPSQNDINATVAVKKALESIEISLLDHIIISNNNYFSFKEYS 227 Query: 147 LL 148 L+ Sbjct: 228 LI 229 >UniRef50_B7RA56 DNA repair protein RadC n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7RA56_9THEO Length = 208 Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 40/86 (46%), Positives = 61/86 (70%) Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 IA ET+ G++N + VHPREV K A+ +A++++L HNHPSG+ TPS+ D +T+RLV+A Sbjct: 118 IAIETISIGSLNTSIVHPREVFKAAIERSASSIILVHNHPSGDPTPSREDVEVTKRLVEA 177 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHG 146 ++ I+V DH+I+G + S E G Sbjct: 178 GNILGIKVLDHVIIGDGRGISLKEKG 203 >UniRef50_Q1GQ77 DNA repair protein RadC n=1 Tax=Sphingopyxis alaskensis RepID=Q1GQ77_SPHAL Length = 354 Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 47/124 (37%), Positives = 76/124 (61%), Gaps = 1/124 (0%) Query: 12 ALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTI 71 A+++L L + G+ + + R +L L+M L E RVL+L+ +LIA E L GTI Sbjct: 85 AIQSLRADLDDRGIDPANPKLLR-YLKLSMGALPHETLRVLFLDPARRLIADEQLQQGTI 143 Query: 72 NRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDH 131 ++PR + +RA+ +AAA++L HNHPSG+ TPS+AD T RL ++I++ +H Sbjct: 144 GHVAIYPRTIFRRAVELDAAAIILVHNHPSGDPTPSEADVATTARLAAIGRALEIQLLEH 203 Query: 132 LIVG 135 ++V Sbjct: 204 IVVA 207 >UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5YDI9_DICT6 Length = 228 Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 65/109 (59%) Query: 40 NMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNH 99 +M L+ E +Y++ +N+ ++ + G +N PR++ K AL N+A ++LAHNH Sbjct: 120 DMFDLKEEHLFCIYMDIKNKCLSKRLIAKGDLNIVYASPRDIFKYALQENSAKIILAHNH 179 Query: 100 PSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 PSG++TPS+ D + T+RL++A ++ I V DHLI+ S E + Sbjct: 180 PSGDLTPSEDDVIFTKRLIEAGKILGIEVLDHLIIHNEDYLSLKEKNFI 228 >UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A4H3_GEMAT Length = 244 Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 53/102 (51%), Positives = 68/102 (66%) Query: 47 EEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTP 106 EEF V L+ Q++L + G +N + VHPREV + A+ AAAV+L HNHPSG+ TP Sbjct: 143 EEFHVAILDAQHRLERDVLITRGLLNSSLVHPREVFREAIAERAAAVILVHNHPSGDPTP 202 Query: 107 SKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 S DR +TE+LV A L+DI V DH+IVG + SFAE GLL Sbjct: 203 SAEDRAVTEQLVAAGRLLDIPVHDHIIVGRGRYVSFAEAGLL 244 >UniRef50_Q93MC6 DNA repair protein RadC n=1 Tax=Clostridium perfringens RepID=Q93MC6_CLOPE Length = 145 Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 41/108 (37%), Positives = 67/108 (62%) Query: 41 MAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHP 100 + ++RE V+ L+ +N++ + GT+N + VHPREV K A+ N A+++LAHNHP Sbjct: 38 LGEVDREYLIVIVLDVKNKINSISVASVGTLNSSIVHPREVFKTAILANGASIILAHNHP 97 Query: 101 SGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 SG+ +PSK D IT R+ + L+ I + DH+I+G + S G++ Sbjct: 98 SGDTSPSKDDINITTRIKECGVLMGIELLDHVILGDEKFISLKNEGII 145 >UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Y1765_PARUW Length = 231 Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 41/103 (39%), Positives = 64/103 (62%) Query: 46 REEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT 105 RE F ++ + + LI E + G++++T VHPREV A+ H AA++++ HNHPSG+ Sbjct: 127 REIFMAIFQDTKGYLITYEVISIGSLSQTLVHPREVFYSAIRHKAASLIVVHNHPSGDPM 186 Query: 106 PSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 PS D +T+ L++ L+ I + DHLI+G N SF + LL Sbjct: 187 PSNQDLKLTQILLEGSRLLGIPLRDHLIIGKNSYVSFKDQNLL 229 >UniRef50_UPI0001C36A61 DNA repair protein RadC n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36A61 Length = 215 Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 47/138 (34%), Positives = 79/138 (57%), Gaps = 1/138 (0%) Query: 12 ALKTLDRHLHEPGVAFTSTRAAREWLILNMAGL-EREEFRVLYLNNQNQLIAGETLFTGT 70 A ++L + E + + + ++E+ I +A ERE YL++ +I+ E + GT Sbjct: 53 AYQSLRKIEWEERIILSGSERSKEYFISQLAYYREREMILCAYLDSGCGVISCEKVAEGT 112 Query: 71 INRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPD 130 ++R+ RE++KR L +A VVLAHNHP + S+ D IT +L ALG + I+V D Sbjct: 113 VDRSPFFTRELLKRVLQLDAVGVVLAHNHPGNSLKASEQDIAITNQLRDALGALAIKVFD 172 Query: 131 HLIVGGNQVFSFAEHGLL 148 H+IVG ++ S + G++ Sbjct: 173 HIIVGADRAVSLYQEGII 190 >UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID=Y065_PELCD Length = 227 Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 74/126 (58%) Query: 23 PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVI 82 PG +TS +A + +RE F L L+++N+L+ + G++ + VHPR+V Sbjct: 102 PGDRYTSPQAVFAHFHERLRDHKRERFIALLLDSKNRLLREVGISEGSLTASIVHPRDVF 161 Query: 83 KRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSF 142 + +AAAV+ HNHPSG+ +PS+ D IT+RL + L+ +RV DH+I+G S Sbjct: 162 APVVRESAAAVLFVHNHPSGDPSPSREDLDITQRLREVGELMGVRVLDHIIIGDEGYVSL 221 Query: 143 AEHGLL 148 A+ G+L Sbjct: 222 ADRGVL 227 >UniRef50_Q4V1K6 Possible DNA repair protein n=7 Tax=Bacillus cereus group RepID=Q4V1K6_BACCZ Length = 151 Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 66/111 (59%) Query: 38 ILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAH 97 +L + + E F V LN +N++I + G+IN + VHPRE + A+ +NAA++V H Sbjct: 40 VLCIDEMPHEVFGVFNLNTKNEIIGCSIVSQGSINSSVVHPRETFRTAILNNAASIVCFH 99 Query: 98 NHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 NHPSG S DR +T+RL + ++ I + DH+I+G ++ S E G + Sbjct: 100 NHPSGNPDASPEDREVTKRLAECGKILGIELLDHVIIGEHRFVSLREKGCI 150 >UniRef50_C4Z083 DNA repair protein RadC n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z083_EUBE2 Length = 230 Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 71/118 (60%) Query: 27 FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 F++ + + +M LE+E ++ L+N+ +LI + L GT + V RE+ K AL Sbjct: 108 FSNAETIAGYYMEDMRHLEKEHLVLVMLDNRCRLIRDKVLSVGTSTGSMVSVREIFKEAL 167 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAE 144 + AA+VVL HNHPSG +PS+ D +T +++A ++ I + DH+++G N FSF + Sbjct: 168 DNRAASVVLLHNHPSGNPSPSREDMKVTRSVMEAGKIIGIELLDHIVIGDNSYFSFKQ 225 >UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepID=B2V8J4_SULSY Length = 229 Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 1/128 (0%) Query: 21 HEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPRE 80 H + TS A +L ++ +E LYLN+ N LIA E + G++N V PR+ Sbjct: 103 HAEKIKITSVSDAFNYLKF-LSKETQEHMVALYLNSSNHLIAQEVIAKGSLNVVRVLPRD 161 Query: 81 VIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVF 140 ++ A+ HN ++++HNHP+ + TPS+ D T++L + + DH+IVG + Sbjct: 162 ILYYAIKHNCNGIIISHNHPNNDPTPSQEDIEFTKKLQTLANELGFDLLDHIIVGKKDFY 221 Query: 141 SFAEHGLL 148 SFA+ GL+ Sbjct: 222 SFAKAGLI 229 >UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria RepID=Y767_ROSS1 Length = 233 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 76/119 (63%) Query: 29 STRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYH 88 S A + + + M+ L++E+ R + L+ +N++ +T++ G+++ + V E+ K + Sbjct: 110 SPTDAAQLMQIEMSHLDQEQLRAICLDTKNRVQKIQTVYIGSLHTSMVRIGEIFKEPIRL 169 Query: 89 NAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGL 147 N+A++++ HNHPSG+ TPS D ++T ++++A L+DI V DHL++G + S E GL Sbjct: 170 NSASIIVVHNHPSGDPTPSPEDVVVTRQIIEAGRLLDIDVLDHLVIGAGRFVSMRERGL 228 >UniRef50_D2QCL1 DNA repair protein RadC n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QCL1_9SPHI Length = 157 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 41/102 (40%), Positives = 61/102 (59%) Query: 47 EEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTP 106 E+F++L L+ QN +A + TG + P+ + AL A ++LAHNHPSG + P Sbjct: 54 EQFKILLLDQQNNCLAVSEIATGGTSACLADPKVIFATALKTRATGIILAHNHPSGNLAP 113 Query: 107 SKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 S+AD+ +T +L L+DI V DHLIV + SFA+ GL+ Sbjct: 114 SEADKSLTRKLKDGGKLLDIAVLDHLIVTSHNYRSFADDGLM 155 >UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia RepID=Q2GEH3_NEOSM Length = 236 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/140 (35%), Positives = 77/140 (55%) Query: 9 IQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFT 68 ++ ++K + R S ++ ++L L++ E RVL+LN + LI Sbjct: 97 VRESMKAILRKDLTSRTTLKSWKSVVDYLRLSIGNKPVETIRVLFLNKKYTLIREYVQEL 156 Query: 69 GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRV 128 G + T + RE+IK+ L A+A+V+AHNHPSG PS+ D LIT +L + VD+++ Sbjct: 157 GAADHTPLCMREIIKKCLTCGASAMVIAHNHPSGNPLPSQEDLLITGKLKKICQKVDVQL 216 Query: 129 PDHLIVGGNQVFSFAEHGLL 148 DH IV + FSF +GLL Sbjct: 217 VDHFIVTPHDHFSFVVNGLL 236 >UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WXL6_ALIAD Length = 233 Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 76/116 (65%) Query: 33 AREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAA 92 A ++++ + L++E F L L+ +++++A +T G+++ + VHPRE+ +RA+ +A++ Sbjct: 114 AAKYVMDRLRYLKKEHFVTLLLDTKHRVLAEDTSSVGSLDASIVHPREIFRRAIRISASS 173 Query: 93 VVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++ HNHPSG+ +PS D +T+RLV+A ++ I V DH+++G + S G L Sbjct: 174 ILCIHNHPSGDPSPSPEDIAVTKRLVEAGRVLGIEVLDHIVIGDGRFVSLRAEGYL 229 >UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2URH1_AKKM8 Length = 246 Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 39/101 (38%), Positives = 63/101 (62%) Query: 35 EWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVV 94 ++L M E+E VL L+ + +LI + +GT+N + HPR++++ + HNA + Sbjct: 114 DYLTTAMRWKEKETVLVLLLDTKCRLIKPVEISSGTLNESIAHPRDILRPTVIHNAYGFI 173 Query: 95 LAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVG 135 LAHNHPSG PS+ D L+TER+ + L+ +R DH+I+G Sbjct: 174 LAHNHPSGNPAPSRTDDLLTERVRECSKLLGVRFLDHVIIG 214 >UniRef50_C7GIB3 DNA repair protein RadC n=9 Tax=Bacteria RepID=C7GIB3_9FIRM Length = 179 Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 67/110 (60%), Gaps = 2/110 (1%) Query: 41 MAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHP 100 M +RE V+ L + + I G++N HPRE+ K ++ NAA+++L H HP Sbjct: 42 MCQFDREVVCVVNLRSDLKPINVHFASVGSLNEAMAHPRELFKSSILSNAASMMLIHCHP 101 Query: 101 SGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGN--QVFSFAEHGLL 148 SG V PSKAD ++T+R+ + L+ I + DH+IVGG+ + FSF E G++ Sbjct: 102 SGNVFPSKADTMMTDRMNKLCELMGIPLIDHIIVGGDNREFFSFREKGMI 151 >UniRef50_Q65R62 RadC protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65R62_MANSM Length = 111 Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/86 (50%), Positives = 59/86 (68%), Gaps = 2/86 (2%) Query: 27 FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 F ST AR +L + ERE F VL+L+NQ++LI E +F GTIN +HPRE+IK AL Sbjct: 16 FNSTDTARIYLQTALEQREREIFLVLFLDNQHRLIKQEEMFLGTINSAVIHPREIIKTAL 75 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRL 112 Y NAAA++LAHNH +P++ +R+ Sbjct: 76 YCNAAAMILAHNHLRE--SPNRVNRI 99 >UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUS2_DESOH Length = 253 Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 47/103 (45%), Positives = 70/103 (67%) Query: 46 REEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT 105 RE F ++++ +N++I ETL G++ + V+PREV+ RAL H+AAA++ HNHPSGE Sbjct: 126 RETFAAIFMDAKNRVIVVETLSEGSLTESPVYPREVVARALAHHAAALICCHNHPSGEPE 185 Query: 106 PSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 PS+ D IT +LV A + I V +H+IVG FSFA++G + Sbjct: 186 PSRQDIAITRKLVMACKTMGITVHEHIIVGERGHFSFADNGYM 228 >UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DAY3_MYXXD Length = 241 Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/108 (41%), Positives = 61/108 (56%) Query: 41 MAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHP 100 + L RE F VL N +N L+ + GT+N V PREV AL A ++VLAHNHP Sbjct: 116 LGALRREVFHVLCFNARNVLVHDARVAEGTMNTCPVDPREVFAAALTSRATSIVLAHNHP 175 Query: 101 SGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 SG+ PS D +T LV L++I+V DH+++G S E GL+ Sbjct: 176 SGDPEPSVQDLGLTRHLVAGAQLLNIKVLDHVVMGDGGYVSMLERGLM 223 >UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185C66E Length = 221 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 48/122 (39%), Positives = 67/122 (54%) Query: 21 HEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPRE 80 HEP + R + + L EEF VLYLN+ N++I L +G I T V R Sbjct: 98 HEPQPKIEAPRHVFTLMQPLIGDLPHEEFWVLYLNSANRVIHKCRLSSGGITHTTVDIRL 157 Query: 81 VIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVF 140 + K AL A +++L HNHPSG TPSK D +TER+ A +DI++ DH+IV + + Sbjct: 158 LFKNALEQGAVSLILVHNHPSGSTTPSKEDLELTERVRNAGDTLDIKLLDHIIVTEKEYY 217 Query: 141 SF 142 S Sbjct: 218 SI 219 >UniRef50_A6L552 DNA repair protein n=5 Tax=Bacteroidales RepID=A6L552_BACV8 Length = 153 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 42/103 (40%), Positives = 64/103 (62%) Query: 46 REEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT 105 +E F+VL+LN +Q++ + G I T V R +++ AL N+ A++LAHNHPSG + Sbjct: 51 KEYFKVLFLNQSSQVLGYTLISEGGITDTTVDVRVILQAALLTNSVALILAHNHPSGNLK 110 Query: 106 PSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 PS+ D IT+++ A L+ I V DHLI+ +SFA+ G L Sbjct: 111 PSRQDMEITKQVKNAAQLMRITVIDHLILTDAGYYSFADEGQL 153 >UniRef50_A6Q5Q5 DNA repair protein RadC n=2 Tax=unclassified Epsilonproteobacteria RepID=A6Q5Q5_NITSB Length = 220 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 38/104 (36%), Positives = 63/104 (60%) Query: 45 EREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEV 104 ++E F YL+ N++ + GT+N++ VHPREV A+ A++++AHNHPS + Sbjct: 117 KQEYFIAFYLDGANRICEKRVITIGTLNQSLVHPREVFAPAIESRCASIIVAHNHPSNNL 176 Query: 105 TPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 TPS+ D L+T++L Q+ ++ I + DH+I S E G+L Sbjct: 177 TPSREDILVTQKLKQSGKILGIELLDHIIFSKEGFVSLQEEGIL 220 >UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5B1_9CHLA Length = 238 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 43/102 (42%), Positives = 61/102 (59%) Query: 46 REEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT 105 +E F + + + +I T+ GT+ T VHPREV A+ H AA+++L HNHPSG+ T Sbjct: 129 QEHFLTILQDVKGYVICSPTVALGTLTATVVHPREVFYPAIRHRAASLILVHNHPSGDPT 188 Query: 106 PSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGL 147 PSK D +T+ LV LV I V DH+I+G ++ S E G Sbjct: 189 PSKEDLDVTKTLVAVGRLVGICVNDHIIIGRDRYVSLREEGF 230 >UniRef50_C5VLA8 DNA repair protein n=1 Tax=Prevotella melaninogenica ATCC 25845 RepID=C5VLA8_9BACT Length = 147 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 39/101 (38%), Positives = 61/101 (60%) Query: 46 REEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT 105 RE +VLYLN N++IA T+ G + T V R +++ AL NA ++ AHNHP+G + Sbjct: 44 REYAKVLYLNQANEVIAYNTISEGGLTETAVDVRIILQGALLTNATQIIFAHNHPTGNLK 103 Query: 106 PSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 PS D ++T L +A ++ IR DH+I+ + +S+ E G Sbjct: 104 PSPQDDMLTRELQKACQIMRIRFTDHIIMSVDSYYSYREEG 144 >UniRef50_A8RIH3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RIH3_9CLOT Length = 178 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 52/139 (37%), Positives = 77/139 (55%), Gaps = 9/139 (6%) Query: 11 RALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGT 70 RAL + R +PG+A A W + MA +RE VL LN + + A E G Sbjct: 40 RALYGMTR-FTDPGMA-----AEMVWPLFEMA--DREMALVLSLNTKLEPQALEIAAVGG 91 Query: 71 INRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPD 130 +N + R++ K A+ +NAA ++ HNHPSG+ PS DR +T+RL + ++ I + D Sbjct: 92 LNACSIDCRDIFKHAVLNNAAFIICFHNHPSGDPKPSMEDRKLTKRLEECGKILGIPLID 151 Query: 131 HLIVG-GNQVFSFAEHGLL 148 H+IVG G +SF E G+L Sbjct: 152 HIIVGEGPCCYSFKEQGML 170 >UniRef50_C7GE95 DNA repair protein RadC n=2 Tax=Roseburia RepID=C7GE95_9FIRM Length = 243 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 70/124 (56%) Query: 23 PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVI 82 P V T+ R ++ + ++ +E V +N+ + + L G+ N T V PREV Sbjct: 116 PNVCMTNPRTIADYYMEHLRHENKEHLIVCMFDNKCHMKGDKLLSVGSANETIVSPREVF 175 Query: 83 KRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSF 142 + A+ +AA ++L HNHPSG PS AD ++T+R++ L+ I + DH+I+G + FS+ Sbjct: 176 ETAINCHAAHLILVHNHPSGIPEPSHADDVVTKRILNCGQLMGIPLSDHVIIGDHSYFSY 235 Query: 143 AEHG 146 E+ Sbjct: 236 RENN 239 >UniRef50_C4ZA49 DNA repair protein RadC n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZA49_EUBR3 Length = 229 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 69/114 (60%) Query: 35 EWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVV 94 ++ + M L E Y + +++ + + + G+++ + V +I+ AL NA+ +V Sbjct: 116 DYYMEQMRHLTNEVVICAYFDVKSRFLGDKFISKGSLSSSVVDIGSIIRTALDKNASKLV 175 Query: 95 LAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L HNHPSG+ TPS+ D +T+RL++ G+ I + DH+I+G N+ +SF E+ L+ Sbjct: 176 LLHNHPSGDCTPSRNDIAVTDRLIEGSGIFSIELCDHIIIGDNEYYSFYENKLI 229 >UniRef50_A7HJG0 DNA repair protein RadC n=3 Tax=Thermotogaceae RepID=A7HJG0_FERNB Length = 225 Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 74/130 (56%), Gaps = 8/130 (6%) Query: 6 RSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGET 65 + L++ LD L P F ++M +E RV++L+ + ++I + Sbjct: 86 KRLVKEETVILDPKLTSPENVFQ--------YCIDMQSYPQEIVRVIFLDTKLKVIGSKD 137 Query: 66 LFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVD 125 + GTIN + HPR++ + A+ ++ ++LAHNHPSG+ TPSK D +T+++ +A L+ Sbjct: 138 VSKGTINSSMAHPRDIFREAILRSSTGIILAHNHPSGDPTPSKDDIELTKKIKKAGELLG 197 Query: 126 IRVPDHLIVG 135 I + DH+I+G Sbjct: 198 INLHDHVIIG 207 >UniRef50_Q1Q559 Similar to DNA repair protein RadC n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q559_9BACT Length = 137 Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 47/134 (35%), Positives = 77/134 (57%), Gaps = 8/134 (5%) Query: 18 RHLHEPGVAFTSTRAAREWLILNMAG---LEREEFRVLYLNNQNQLIAGETLFTGTINRT 74 + +H PG T R+ IL + G +E F + LNN+N + E + GT+ Sbjct: 8 KSVHGPGDVATIMRS-----ILAVEGEIDRSKEHFWTVGLNNKNVIQYIELVSLGTLTSA 62 Query: 75 EVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIV 134 + PREV + A++ A ++L HNHP+G+ PSK D +T+RL+ A ++ I+V DH+I+ Sbjct: 63 VLGPREVFRLAVHKAIANILLVHNHPAGDPEPSKEDVSVTQRLISAGQILGIQVLDHVII 122 Query: 135 GGNQVFSFAEHGLL 148 G + +SF E G++ Sbjct: 123 GNPEYYSFKERGII 136 >UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria RepID=Y1707_THEEB Length = 250 Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 40/98 (40%), Positives = 64/98 (65%) Query: 47 EEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTP 106 E F VL L+ +++L+ + GT T HPRE+ + A+ NA+ +++AHNHPSG ++P Sbjct: 138 ERFAVLLLDVRHRLLGSHVITVGTATETLAHPREIFREAVRRNASRLIIAHNHPSGNLSP 197 Query: 107 SKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAE 144 S+AD +T++++QA L++I V DHLI+G S E Sbjct: 198 SQADLDLTKQILQAGQLMEIPVLDHLILGNGDYQSLRE 235 >UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C7TC16_LACRG Length = 222 Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 65/109 (59%) Query: 35 EWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVV 94 + ++ AG +E +L+L+ +NQ+I + + GT++ PR V + AL +A ++ Sbjct: 107 KTMVSRFAGANQESMLILFLDVKNQIITEQIVAIGTVDSALADPRVVFREALKLSATNLI 166 Query: 95 LAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFA 143 + HNHPSG+ +PS+ADR T R A L+ + + DHLI+G +SFA Sbjct: 167 MVHNHPSGDPSPSQADRDTTTRFQLAAALLGMHLLDHLIIGRQSYYSFA 215 >UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EK65_PEDAC Length = 225 Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 40/103 (38%), Positives = 62/103 (60%) Query: 46 REEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT 105 +E +L L+ +NQ+ +F G +N EVHPRE++ L +++ +L HNHPSG V Sbjct: 120 QEHLVLLCLDTKNQIKQERVIFKGGLNSAEVHPREIMAEVLRYSSNGFILVHNHPSGNVE 179 Query: 106 PSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 PS D T+++ + L+ IR+ DHLIVG +S AE+ +L Sbjct: 180 PSMNDVAFTKKMKKIGDLMGIRLIDHLIVGDQTYWSAAENRVL 222 >UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHT1_9DELT Length = 260 Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 3/140 (2%) Query: 9 IQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFT 68 + R L LD + P R A +L + ERE F ++ L+ + +++ T+ Sbjct: 108 LHRRLDRLDLPMRRP---LRHPREAERFLRSLLGDAEREHFMIIGLDARQRVLLVRTIAV 164 Query: 69 GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRV 128 G++ R EVHPREV + + A +L HNHPSG+ PS+AD +T R+ + I V Sbjct: 165 GSLTRVEVHPREVFRPLVRAGAHTCLLVHNHPSGDARPSEADIELTARMTDIGRFLGIPV 224 Query: 129 PDHLIVGGNQVFSFAEHGLL 148 DH++V N S AE GL+ Sbjct: 225 LDHVVVSANGFVSLAELGLV 244 >UniRef50_B0PEI5 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEI5_9FIRM Length = 230 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 69/135 (51%), Gaps = 1/135 (0%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 + LD HE V TS +A ++L G +E +L LNN+ L G+ + GTI+ Sbjct: 91 RYLDSADHEQ-VLLTSVQAIGDFLRPKFLGRTKEMVFLLCLNNKGGLTYGDFIAEGTIDS 149 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 ++ R +++ A+ A +V+LAHNHP G PS AD TE + AL IR+ DH I Sbjct: 150 APMYSRTILEAAMRSRAVSVILAHNHPHGLAVPSNADLAATESVCHALAAAKIRLLDHFI 209 Query: 134 VGGNQVFSFAEHGLL 148 G S + G + Sbjct: 210 FAGQDYISLRDSGFI 224 >UniRef50_A5EYF9 Response regulator receiver domain protein-DNA repair protein RadC n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EYF9_DICNV Length = 401 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 72/130 (55%), Gaps = 3/130 (2%) Query: 20 LHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL---FTGTINRTEV 76 L P F+S R +L+++ GL EE +L LN +NQ +A E + F +++ V Sbjct: 270 LQLPEWQFSSADDVRNFLLMHYKGLGFEEVAILLLNQKNQYLAYERIGQAFGSEVSQVNV 329 Query: 77 HPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGG 136 R+++K L +AAAVVL HNHP+ S++D T+ + L + +R+ DH +V G Sbjct: 330 SCRKLVKSVLDSDAAAVVLVHNHPAQSTELSESDLQTTKFIENFLKPLGVRLLDHFVVAG 389 Query: 137 NQVFSFAEHG 146 NQV S E G Sbjct: 390 NQVISLRETG 399 >UniRef50_A9B8G6 DNA repair protein RadC n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B8G6_HERA2 Length = 204 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 44/107 (41%), Positives = 64/107 (59%) Query: 41 MAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHP 100 M+ LE+EE RV+ L+ Q +I T+ GT+N ++ + L NAA+V+LAHNHP Sbjct: 94 MSHLEQEELRVISLSTQAHIIGMHTVVVGTLNTAYCRMADLFREPLRRNAASVILAHNHP 153 Query: 101 SGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGL 147 SG V S D L+T++ +QA L++I + DHLI+G S E L Sbjct: 154 SGMVWASPEDILLTKQAIQAGQLLEIELLDHLIIGKGGYTSMRERRL 200 >UniRef50_A6EKP4 DNA repair protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EKP4_9SPHI Length = 164 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/102 (39%), Positives = 61/102 (59%) Query: 47 EEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTP 106 EEF+++ N Q+ ++ T+ TG I V P+ + A+ A ++LAHNHPSG++TP Sbjct: 50 EEFKIVLFNCQSVVLGVMTVATGGITHVMVDPKLIFAAAVTSGATGILLAHNHPSGDLTP 109 Query: 107 SKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 S D+ +T+R+++ L I V DHLIV FSF E L+ Sbjct: 110 SIPDKQLTKRIIKLAELHQITVLDHLIVNSEDYFSFVEANLI 151 >UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LCX8_9BACT Length = 228 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/102 (39%), Positives = 61/102 (59%) Query: 47 EEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTP 106 EEF ++LN + QL++ + G + T V R + +AL A A+ + HNHPSG P Sbjct: 126 EEFHAMFLNRRLQLVSEALIGRGGLTETTVDVRLLFGKALEAKATALAICHNHPSGNPRP 185 Query: 107 SKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 S+AD +T+++ QA L+DIR+ DH+IV +S+ E G L Sbjct: 186 SQADDRLTQKVAQAARLLDIRLVDHIIVADKCYYSYQEEGKL 227 >UniRef50_A5VEU8 DNA repair protein RadC n=4 Tax=Sphingomonadales RepID=A5VEU8_SPHWW Length = 230 Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 73/122 (59%) Query: 27 FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 + +A ++L +MA E RVL+LN++N L+ E + G++++ V+ RE+I+RAL Sbjct: 109 LSDWQALADYLRADMAHRAVERVRVLHLNSKNVLVRDELVSEGSVDQAAVYVREIIRRAL 168 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 +AA+++ HNHPSG+ PS+ D +T L+ A + I + DH++VG S G Sbjct: 169 ELGSAALIIVHNHPSGDPQPSRQDVELTRELIAAAKPLGIAIHDHVVVGTRGQASLRALG 228 Query: 147 LL 148 L+ Sbjct: 229 LI 230 >UniRef50_C0YH45 DNA repair protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YH45_9FLAO Length = 147 Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 63/103 (61%) Query: 46 REEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT 105 RE F +Y+N N+++ + + I + V R +++ AL NA + ++AHNHPSG +T Sbjct: 45 RESFYSMYMNQANKVLGIQKISESGITSSLVDIRIIMQGALLCNAVSFIIAHNHPSGNLT 104 Query: 106 PSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 PS+ D IT+++ +A L++I + DH I+ FSF+ G+L Sbjct: 105 PSREDINITQKIKEAAQLLNINMLDHCIITSTDSFSFSNEGIL 147 >UniRef50_Q73P26 DNA repair protein RadC n=2 Tax=Treponema RepID=Q73P26_TREDE Length = 225 Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/111 (43%), Positives = 69/111 (62%), Gaps = 1/111 (0%) Query: 37 LILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLA 96 L+ + A +RE F + LN N++IA + GTINRT VHPREV L AAA++ A Sbjct: 110 LLQHYADRDREHFICVSLNGANEIIATRVVSVGTINRTIVHPREVYSDPLKDRAAAIIAA 169 Query: 97 HNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGN-QVFSFAEHG 146 HNHPSG + PS D +T+R+ +A ++ I++ DH+I+ N FSF + G Sbjct: 170 HNHPSGNLEPSSEDMELTKRIYEAGKILGIKLLDHIILVPNGNFFSFVQSG 220 >UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus RepID=D2RM81_ACIFE Length = 220 Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/150 (38%), Positives = 85/150 (56%), Gaps = 5/150 (3%) Query: 3 PGERSLIQRALKTLDRHLHEPGV-AFTSTRAAREWLILNMAGLE---REEFRVLYLNNQN 58 P + ++I AL+ L R L G F + + +L M L E F V+ LN++ Sbjct: 72 PAKATVILAALE-LGRRLAGAGTRPFRTIHCPEDGAMLVMPRLRYENHEHFLVVLLNSKG 130 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 ++I E + G++N + VHPRE AL H+AAA++ HNHPSG+ TPS+ DR +T L Sbjct: 131 KVIGIEPVSEGSLNASVVHPREAFAPALLHHAAAILAVHNHPSGDPTPSREDRELTRTLW 190 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++ I + DHLI+G +SF EHGLL Sbjct: 191 DTGKVMGIPLVDHLIIGDGVYYSFKEHGLL 220 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriacea... 194 7e-49 UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobact... 192 2e-48 UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriace... 188 5e-47 UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriace... 182 2e-45 UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria ... 181 6e-45 UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97... 179 2e-44 UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium v... 177 8e-44 UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriace... 177 1e-43 UniRef50_A1TJG0 DNA repair protein RadC n=1 Tax=Acidovorax citru... 174 1e-42 UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellacea... 174 1e-42 UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteri... 172 2e-42 UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia... 171 5e-42 UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobact... 171 6e-42 UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobact... 171 7e-42 UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria ... 170 1e-41 UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria ... 170 1e-41 UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriacea... 170 1e-41 UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferr... 169 2e-41 UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria ... 169 3e-41 UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteoba... 169 3e-41 UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepI... 169 3e-41 UniRef50_D2NHT0 Putative phage DNA repair protein n=1 Tax=Escher... 169 3e-41 UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacte... 168 5e-41 UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. ... 167 7e-41 UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibac... 167 8e-41 UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax... 167 1e-40 UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacte... 167 1e-40 UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida... 167 1e-40 UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomon... 167 1e-40 UniRef50_B1HKP9 DNA repair protein n=1 Tax=Burkholderia pseudoma... 167 1e-40 UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacter... 166 2e-40 UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiace... 166 2e-40 UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicu... 166 2e-40 UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacter... 166 3e-40 UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 165 4e-40 UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonad... 165 4e-40 UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcin... 165 4e-40 UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales Re... 165 4e-40 UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID... 165 5e-40 UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus... 164 6e-40 UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria R... 164 9e-40 UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadal... 164 1e-39 UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax... 164 1e-39 UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrue... 163 1e-39 UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID... 162 3e-39 UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp... 162 4e-39 UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaprot... 162 4e-39 UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio y... 161 5e-39 UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcu... 161 5e-39 UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular orga... 161 7e-39 UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobac... 161 8e-39 UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KC... 161 9e-39 UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium ... 160 1e-38 UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KC... 160 1e-38 UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. ... 160 1e-38 UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y... 160 1e-38 UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobac... 160 1e-38 UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococ... 160 2e-38 UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacte... 160 2e-38 UniRef50_C4SWK5 DNA repair protein n=1 Tax=Yersinia intermedia A... 159 2e-38 UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacte... 159 2e-38 UniRef50_B0RXB0 DNA repair protein radC homolog n=3 Tax=Xanthomo... 159 2e-38 UniRef50_Q02HM7 Putative uncharacterized protein n=1 Tax=Pseudom... 159 2e-38 UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostri... 159 3e-38 UniRef50_Q5DY97 DNA repair protein RadC n=17 Tax=Proteobacteria ... 159 3e-38 UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris... 158 4e-38 UniRef50_B1I0K4 DNA repair protein radC-like protein n=1 Tax=Lys... 158 4e-38 UniRef50_B1JAY7 DNA repair protein RadC n=4 Tax=Pseudomonas RepI... 158 4e-38 UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales Re... 158 5e-38 UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepI... 158 6e-38 UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus Rep... 157 7e-38 UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Ha... 157 1e-37 UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus je... 157 1e-37 UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacte... 157 1e-37 UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis ex... 157 1e-37 UniRef50_B9ECC3 Putative uncharacterized protein n=1 Tax=Macroco... 156 1e-37 UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobac... 156 2e-37 UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=... 156 2e-37 UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae R... 156 2e-37 UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonel... 156 2e-37 UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria Rep... 156 2e-37 UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular orga... 156 2e-37 UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus mar... 156 2e-37 UniRef50_C9NPT2 DNA repair protein RadC n=1 Tax=Vibrio coralliil... 156 3e-37 UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae... 156 3e-37 UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 155 4e-37 UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostri... 155 4e-37 UniRef50_C5D8D2 DNA repair protein RadC n=4 Tax=Firmicutes RepID... 155 4e-37 UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerof... 155 4e-37 UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales... 155 5e-37 UniRef50_C6E4Z0 DNA repair protein RadC n=3 Tax=Geobacter RepID=... 155 5e-37 UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium Re... 155 5e-37 UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales Re... 154 6e-37 UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditroph... 154 6e-37 UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio ae... 154 7e-37 UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivib... 154 9e-37 UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovib... 154 9e-37 UniRef50_A1B298 DNA repair protein RadC n=7 Tax=Bacteria RepID=A... 154 1e-36 UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobact... 154 1e-36 UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Esch... 154 1e-36 UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes Re... 153 1e-36 UniRef50_Q3AF80 UPF0758 protein CHY_0341 n=1 Tax=Carboxydothermu... 153 1e-36 UniRef50_Q4QPE3 Putative DNA repair radC-like protein n=5 Tax=Ha... 153 1e-36 UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrional... 153 2e-36 UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepI... 153 2e-36 UniRef50_Q2S042 UPF0758 protein SRU_2338 n=1 Tax=Salinibacter ru... 153 2e-36 UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q... 153 2e-36 UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio sa... 153 2e-36 UniRef50_A7HJG0 DNA repair protein RadC n=3 Tax=Thermotogaceae R... 153 2e-36 UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q... 152 2e-36 UniRef50_A9IEU5 Putative DNA repair protein n=1 Tax=Bordetella p... 152 3e-36 UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus s... 152 3e-36 UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobact... 152 3e-36 UniRef50_C9LLN8 DNA repair protein RadC n=1 Tax=Dialister invisu... 152 5e-36 UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanth... 151 5e-36 UniRef50_C0GE80 DNA repair protein RadC n=1 Tax=Dethiobacter alk... 151 5e-36 UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdema... 151 6e-36 UniRef50_C4Z083 DNA repair protein RadC n=1 Tax=Eubacterium elig... 151 6e-36 UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Pep... 151 6e-36 UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae... 151 7e-36 UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacte... 151 8e-36 UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillu... 151 1e-35 UniRef50_B7ANR2 Putative uncharacterized protein n=1 Tax=Bactero... 151 1e-35 UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia ... 150 1e-35 UniRef50_B5V5B9 RadC n=5 Tax=Firmicutes RepID=B5V5B9_BACCE 150 1e-35 UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes Re... 150 2e-35 UniRef50_C2KVW9 Possible DNA repair protein RadC n=1 Tax=Oribact... 150 2e-35 UniRef50_C3WF45 Putative uncharacterized protein n=1 Tax=Fusobac... 149 2e-35 UniRef50_Q6TFX1 ORF25 n=3 Tax=Enterobacteriaceae RepID=Q6TFX1_ERWAM 149 2e-35 UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacte... 149 2e-35 UniRef50_C8PDJ9 DNA repair protein RadC n=1 Tax=Lactobacillus in... 149 2e-35 UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus ... 149 3e-35 UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes... 149 3e-35 UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma pro... 148 4e-35 UniRef50_A6Q5Q5 DNA repair protein RadC n=2 Tax=unclassified Eps... 148 4e-35 UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21... 148 4e-35 UniRef50_Q0FHF8 DNA repair protein RadC n=1 Tax=Roseovarius sp. ... 148 5e-35 UniRef50_C7GE95 DNA repair protein RadC n=2 Tax=Roseburia RepID=... 148 5e-35 UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridi... 148 5e-35 UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilact... 148 6e-35 UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius t... 147 7e-35 UniRef50_A9I305 DNA repair protein radC homolog n=3 Tax=Proteoba... 147 8e-35 UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica... 147 8e-35 UniRef50_A8YUM9 DNA repair protein RadC n=9 Tax=Lactobacillus Re... 147 9e-35 UniRef50_A3ER13 DNA repair protein (RadC) n=3 Tax=Leptospirillum... 147 9e-35 UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus ... 147 1e-34 UniRef50_Q3A6E7 DNA repair protein, RadC-like n=3 Tax=Desulfurom... 147 1e-34 UniRef50_C6VI64 DNA repair protein n=3 Tax=Lactobacillus plantar... 147 1e-34 UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocyto... 147 1e-34 UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muci... 147 1e-34 UniRef50_B3JIE2 Putative uncharacterized protein n=10 Tax=Bacter... 147 1e-34 UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM... 147 1e-34 UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteri... 146 2e-34 UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID... 146 2e-34 UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter past... 146 2e-34 UniRef50_Q03R16 DNA repair protein n=1 Tax=Lactobacillus brevis ... 146 2e-34 UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus Rep... 146 2e-34 UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID... 146 2e-34 UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronosp... 146 2e-34 UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleid... 146 2e-34 UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter ox... 146 2e-34 UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepI... 145 3e-34 UniRef50_O67541 UPF0758 protein aq_1610 n=2 Tax=Aquificaceae Rep... 145 3e-34 UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID... 145 3e-34 UniRef50_B0MF12 Putative uncharacterized protein n=3 Tax=Clostri... 145 4e-34 UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales R... 145 4e-34 UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organis... 145 4e-34 UniRef50_A7V531 Putative uncharacterized protein n=1 Tax=Bactero... 145 4e-34 UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon ... 145 5e-34 UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepI... 145 5e-34 UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacte... 145 5e-34 UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera ara... 145 5e-34 UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiac... 145 5e-34 UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Delta... 145 5e-34 UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria ba... 145 5e-34 UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magn... 144 7e-34 UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pac... 144 9e-34 UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteob... 144 9e-34 UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga o... 144 9e-34 UniRef50_Q9LAI3 RadC (Fragment) n=2 Tax=Firmicutes RepID=Q9LAI3_... 144 1e-33 UniRef50_C0GR82 DNA repair protein RadC n=2 Tax=Desulfonatronosp... 144 1e-33 UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepI... 143 2e-33 UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=... 143 2e-33 UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C... 143 2e-33 UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tanne... 143 2e-33 UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=... 142 2e-33 UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillu... 142 2e-33 UniRef50_C0R372 DNA repair protein RadC, putative n=11 Tax=Wolba... 142 3e-33 UniRef50_A5VEU8 DNA repair protein RadC n=4 Tax=Sphingomonadales... 142 3e-33 UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales R... 142 3e-33 UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria R... 142 3e-33 UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotro... 142 3e-33 UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae ... 142 4e-33 UniRef50_B5CP31 Putative uncharacterized protein n=2 Tax=Clostri... 142 4e-33 UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium Re... 142 4e-33 UniRef50_D1W0Q6 Putative DNA repair protein RadC n=2 Tax=Prevote... 142 4e-33 UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A... 142 4e-33 UniRef50_B8KU95 DNA repair protein RadC n=1 Tax=gamma proteobact... 142 4e-33 UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saph... 142 4e-33 UniRef50_Q4V1K6 Possible DNA repair protein n=7 Tax=Bacillus cer... 142 5e-33 UniRef50_Q4EGF4 DNA repair protein RadC n=7 Tax=Bacilli RepID=Q4... 141 5e-33 UniRef50_D1QST5 DNA repair protein RadC n=13 Tax=Bacteroidales R... 141 5e-33 UniRef50_A8RIH3 Putative uncharacterized protein n=2 Tax=Clostri... 141 6e-33 UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus ol... 141 7e-33 UniRef50_C0QCU0 RadC2 n=2 Tax=Desulfobacterium autotrophicum HRM... 140 8e-33 UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae ... 140 1e-32 UniRef50_Q93MC6 DNA repair protein RadC n=1 Tax=Clostridium perf... 140 1e-32 UniRef50_C7PSZ0 DNA repair protein RadC n=1 Tax=Chitinophaga pin... 140 1e-32 UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexan... 140 1e-32 UniRef50_Q03EP2 DNA repair protein n=1 Tax=Pediococcus pentosace... 140 1e-32 UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin5... 140 1e-32 UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax... 140 2e-32 UniRef50_B2KEG6 DNA repair protein RadC n=1 Tax=Elusimicrobium m... 139 2e-32 UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aur... 139 2e-32 UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium Re... 139 2e-32 UniRef50_A1BGW3 DNA repair protein RadC n=2 Tax=Chlorobium RepID... 139 3e-32 UniRef50_C4ZA49 DNA repair protein RadC n=1 Tax=Eubacterium rect... 139 3e-32 UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio ac... 139 3e-32 UniRef50_A9BIK5 DNA repair protein RadC n=1 Tax=Petrotoga mobili... 139 4e-32 UniRef50_B5Y6A0 UPF0758 protein COPRO5265_1522 n=1 Tax=Coprother... 139 4e-32 UniRef50_UPI00016C0069 DNA repair protein RadC n=1 Tax=Epulopisc... 139 4e-32 UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistip... 138 4e-32 UniRef50_C8N8A0 DNA repair protein RadC n=1 Tax=Cardiobacterium ... 138 4e-32 UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcu... 138 5e-32 UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachl... 138 6e-32 UniRef50_Q0GNI5 Smu18B n=1 Tax=uncultured organism RepID=Q0GNI5_... 138 6e-32 UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protoc... 138 6e-32 UniRef50_Q2QJL1 DNA repair protein RadC n=1 Tax=Acetobacter acet... 137 9e-32 UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia Re... 137 1e-31 UniRef50_C5NXB5 DNA repair protein RadC homolog n=1 Tax=Gemella ... 137 1e-31 UniRef50_Q73P26 DNA repair protein RadC n=2 Tax=Treponema RepID=... 137 1e-31 UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5... 137 1e-31 UniRef50_Q47CZ3 DNA repair protein RadC n=2 Tax=Dechloromonas ar... 137 1e-31 UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus la... 137 1e-31 UniRef50_C1QC41 DNA repair protein n=2 Tax=Brachyspira RepID=C1Q... 137 1e-31 UniRef50_C3DWR5 DNA repair protein RadC n=1 Tax=Bacillus thuring... 136 2e-31 UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vade... 136 2e-31 UniRef50_B1H050 DNA repair protein RadC n=1 Tax=uncultured Termi... 135 3e-31 UniRef50_C7VI58 DNA repair protein RadC n=3 Tax=Bacilli RepID=C7... 135 3e-31 UniRef50_A8ZTW3 DNA repair protein RadC n=5 Tax=Bacteria RepID=A... 135 3e-31 UniRef50_A9B8G6 DNA repair protein RadC n=1 Tax=Herpetosiphon au... 135 4e-31 UniRef50_UPI00016B261F DNA repair protein RadC n=2 Tax=candidate... 135 4e-31 UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix r... 135 5e-31 UniRef50_Q2FT43 UPF0758 protein Mhun_2739 n=5 Tax=Archaea RepID=... 135 5e-31 UniRef50_A8ZYJ4 DNA repair protein RadC n=1 Tax=Desulfococcus ol... 135 6e-31 UniRef50_A6DQ92 DNA repair protein RadC n=1 Tax=Lentisphaera ara... 134 7e-31 UniRef50_Q2IG79 DNA repair protein RadC n=8 Tax=Anaeromyxobacter... 134 7e-31 UniRef50_A6L552 DNA repair protein n=5 Tax=Bacteroidales RepID=A... 134 9e-31 UniRef50_B0G8S0 Putative uncharacterized protein n=5 Tax=Firmicu... 134 9e-31 UniRef50_B9L1S0 DNA repair protein radC homolog n=4 Tax=Bacteria... 134 1e-30 Sequences not found previously or not previously below threshold: >UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriaceae RepID=YFJY_ECOLI Length = 160 Score = 194 bits (494), Expect = 7e-49, Method: Composition-based stats. Identities = 109/143 (76%), Positives = 125/143 (87%) Query: 6 RSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGET 65 + ++RAL LDRHL E GVAFTST+AAR+WL L MAGLEREEF +LYLN QNQLIA ET Sbjct: 18 QRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHET 77 Query: 66 LFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVD 125 LF G+I+ TEVHPREV+KRALY NAAAV+LAHNHPSG+ TPS+AD+ IT+RLVQAL LVD Sbjct: 78 LFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVD 137 Query: 126 IRVPDHLIVGGNQVFSFAEHGLL 148 IRVPDHLIVGG Q++SFAEHGLL Sbjct: 138 IRVPDHLIVGGRQIYSFAEHGLL 160 >UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobacteriaceae RepID=C8U0Q3_ECO10 Length = 180 Score = 192 bits (490), Expect = 2e-48, Method: Composition-based stats. Identities = 84/148 (56%), Positives = 112/148 (75%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 +TP + I+RA+ LD++L +PG+AFTS+ AAR+WL L++A ERE F VLYL+NQ++L Sbjct: 33 LTPYAQRTIRRAMNLLDKYLRQPGIAFTSSTAARDWLRLHLARQEREVFMVLYLDNQHRL 92 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 + ETLF G++N +VH REV+K AL NAAAVVLAHNHPSG+ PS+ DR IT RL +A Sbjct: 93 LESETLFAGSVNHVQVHSREVVKSALRFNAAAVVLAHNHPSGDPEPSQCDRNITGRLKEA 152 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L LVD++ DHL+VG + + SFAE G L Sbjct: 153 LELVDVKTLDHLVVGRDGIVSFAERGWL 180 >UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B1IPT7_ECOLC Length = 159 Score = 188 bits (478), Expect = 5e-47, Method: Composition-based stats. Identities = 86/148 (58%), Positives = 113/148 (76%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 + P ++ +++AL L+ L E G +FTS+ A R+WL L +A LEREEF L+L+NQ++L Sbjct: 12 LAPADQQTVRKALSLLECQLRETGASFTSSHAVRDWLRLQLASLEREEFTALFLDNQHRL 71 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 IA ETLFTGTIN T+VHPREV+K L HN AAV++AH+HPSGE PSKADR +T R+ QA Sbjct: 72 IAHETLFTGTINHTQVHPREVVKAGLKHNCAAVIVAHSHPSGEAEPSKADRQVTTRIQQA 131 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L LVDIR+ DHL+VGG ++ SFA+ G L Sbjct: 132 LDLVDIRLLDHLVVGGMEITSFADRGWL 159 >UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B3HA66_ECOLX Length = 157 Score = 182 bits (464), Expect = 2e-45, Method: Composition-based stats. Identities = 83/148 (56%), Positives = 109/148 (73%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 + E+ +I+RA++ L+++ PG +F S+ A + WL L++A ERE F VLYL+NQN+L Sbjct: 10 FSVSEQRVIRRAMRLLEKYQRNPGESFLSSDATKTWLQLHLARQEREMFVVLYLDNQNRL 69 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 + ETLF GTIN TEVHPRE++K AL HNAAAV+LAHNHPSG PS+ADRLIT +V+ Sbjct: 70 LEHETLFLGTINSTEVHPREIVKSALRHNAAAVILAHNHPSGVAEPSRADRLITTNIVKT 129 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L LV++RV DH I+G V SFAE G L Sbjct: 130 LDLVNVRVLDHFIIGAGDVLSFAERGWL 157 >UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria RepID=A6SWN0_JANMA Length = 190 Score = 181 bits (460), Expect = 6e-45, Method: Composition-based stats. Identities = 64/148 (43%), Positives = 102/148 (68%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 +T + ++ RA++ LD H+ + G TS + +++L L + +RE F V++++ Q+++ Sbjct: 42 LTAVDTWIVHRAIEILDEHVIKHGPKLTSPKDVKDYLRLQLLNEKREVFAVVFMDTQHRV 101 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 +A E LF GTI++T V+PR +++RA+ NAA+++LAHNHPSG PS+AD+ +T RL Sbjct: 102 LAYEPLFFGTIHQTSVYPRAIVQRAMSLNAASMILAHNHPSGSTHPSEADKQLTNRLKSL 161 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L +D+RV DH I+G FSFAEHGLL Sbjct: 162 LESIDVRVLDHFIIGEEGTFSFAEHGLL 189 >UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97_BURM1 Length = 169 Score = 179 bits (455), Expect = 2e-44, Method: Composition-based stats. Identities = 68/145 (46%), Positives = 96/145 (66%), Gaps = 1/145 (0%) Query: 4 GERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAG 63 +++ A + +D+ + + G FTS A +++L +AG E E F VL+L+ +++LI Sbjct: 26 SADQILEAARQVIDQKM-QRGDEFTSPAAVKDYLRAKLAGFEHEVFAVLFLDTRHRLIDY 84 Query: 64 ETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGL 123 +F GTI+ EVHPREV+K AL NAAAV+++HNHPSG PS ADR +T +L QAL L Sbjct: 85 AEMFRGTIDSAEVHPREVVKEALRLNAAAVIISHNHPSGNPEPSAADRAMTSQLRQALAL 144 Query: 124 VDIRVPDHLIVGGNQVFSFAEHGLL 148 VD+R DH+IV G SFAE GL+ Sbjct: 145 VDVRTLDHIIVAGGTTTSFAERGLI 169 >UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SDF8_CHRVI Length = 167 Score = 177 bits (451), Expect = 8e-44, Method: Composition-based stats. Identities = 67/144 (46%), Positives = 94/144 (65%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 ER+L+ A+ L+RH A TS A R++L L + GL E F VL L+N+++++ + Sbjct: 24 ERTLVAEAIDCLERHYRVAQEALTSPDATRDYLKLRLYGLTYEVFAVLLLDNRHRVLRYQ 83 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GTI+ VHPREV++ + AAAV+ AHNHPSG PS+ADR +T +L AL L+ Sbjct: 84 ELFRGTIDTAYVHPREVVRLVIESGAAAVIFAHNHPSGSSDPSQADRTLTRKLQDALALI 143 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 ++RV DH+IVG + SFAE G L Sbjct: 144 EVRVLDHIIVGEGRGMSFAEQGWL 167 >UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriaceae RepID=C6DAT0_PECCP Length = 157 Score = 177 bits (449), Expect = 1e-43, Method: Composition-based stats. Identities = 74/144 (51%), Positives = 102/144 (70%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E+ +IQ AL L++ + + F ++ + WL+L ++ LERE F VLYL+NQ++LI E Sbjct: 14 EQRIIQMALCLLEKRVRKNARQFKTSEDTKSWLMLELSNLEREVFMVLYLDNQHRLIEKE 73 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 + G IN TEVHPRE++K +L HNAAAV+LAHNHPSG PS+ADR IT+RL +L + Sbjct: 74 VIALGGINSTEVHPREILKASLRHNAAAVILAHNHPSGWAEPSQADRNITDRLKDSLSQL 133 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 D++V DHL+VG +V SFAE G L Sbjct: 134 DVKVLDHLVVGSTEVVSFAERGWL 157 >UniRef50_A1TJG0 DNA repair protein RadC n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TJG0_ACIAC Length = 167 Score = 174 bits (441), Expect = 1e-42, Method: Composition-based stats. Identities = 69/148 (46%), Positives = 98/148 (66%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 +T E L+ RAL L++ + A ++ R ++L L +AG E F V++L+ QN+ Sbjct: 20 LTVQESRLVHRALHVLEQRMFHREAAISTPRELYDYLRLKLAGELHEVFGVVFLDCQNRA 79 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 IA E LF GTIN+ V+PR ++KRA+ NA++V+L HNHPSG S ADR +TER+ + Sbjct: 80 IAFEALFRGTINQAVVYPRVIVKRAMDLNASSVILVHNHPSGTSQCSDADRGLTERICAS 139 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 LGL+D+RV DH+IVG +SFAE GLL Sbjct: 140 LGLIDVRVVDHVIVGSGTPYSFAEAGLL 167 >UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellaceae RepID=Y009_HAES2 Length = 222 Score = 174 bits (441), Expect = 1e-42, Method: Composition-based stats. Identities = 67/143 (46%), Positives = 91/143 (63%), Gaps = 3/143 (2%) Query: 9 IQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGET 65 +Q + R+L + FTS R +L + +RE F VL+L+NQ++LI E Sbjct: 80 LQACTEMTKRYLLQELQFAQEFTSPDTVRMYLQTELENKDREIFMVLFLDNQHRLIKKEE 139 Query: 66 LFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVD 125 +F GTIN+ V+PRE+IK AL+ NAAA++LAHNHPSG TPS ADR +TE + Q L++ Sbjct: 140 MFLGTINQANVYPREIIKTALFCNAAALILAHNHPSGVSTPSMADRKMTENIKQLSELME 199 Query: 126 IRVPDHLIVGGNQVFSFAEHGLL 148 IRV DH I+G FSFAE G + Sbjct: 200 IRVLDHFIIGKGNYFSFAEQGWI 222 >UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteria RepID=Y399_STRMK Length = 234 Score = 172 bits (438), Expect = 2e-42, Method: Composition-based stats. Identities = 71/152 (46%), Positives = 95/152 (62%), Gaps = 4/152 (2%) Query: 1 MTPGERSLIQRALKTLDRHLH---EPGVAF-TSTRAAREWLILNMAGLEREEFRVLYLNN 56 + P + L+ R+L E G A + A +L + G RE F L+L+N Sbjct: 74 LGPARSCTLAAGLELAHRYLAAELEHGEAVGNNPAAVGRYLQHRLRGQAREVFMALFLDN 133 Query: 57 QNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITER 116 +++LIA E LF GTIN V+PREV++RAL HNAAAV+L+HNHPSG+ PS AD IT+ Sbjct: 134 RHRLIACEELFHGTINAAPVYPREVVRRALLHNAAAVILSHNHPSGDPEPSSADTRITDE 193 Query: 117 LVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L QAL +VD+R+ DH +VG + SFAE GLL Sbjct: 194 LQQALAMVDVRLLDHFVVGEGRPVSFAERGLL 225 >UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia RepID=A7FEQ9_YERP3 Length = 162 Score = 171 bits (435), Expect = 5e-42, Method: Composition-based stats. Identities = 71/145 (48%), Positives = 99/145 (68%) Query: 4 GERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAG 63 ++ +I +AL L+ L TS A + WL L++ RE F VL+L+N+++L+A Sbjct: 16 AQQQIISQALAILEIQLRHRPYTLTSPEAVKAWLQLHLRPQGRECFMVLFLDNRHRLMAS 75 Query: 64 ETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGL 123 ET+ GT N T V+PREV+ RAL+H AAVV+AHNHP+G+ TPS+ADR +T +LV AL + Sbjct: 76 ETVSVGTFNATTVYPREVVIRALHHRCAAVVIAHNHPAGDPTPSQADRTLTAQLVNALNM 135 Query: 124 VDIRVPDHLIVGGNQVFSFAEHGLL 148 VDIRV DHLI+G ++ S AE G L Sbjct: 136 VDIRVLDHLIIGESEPVSLAELGWL 160 >UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KQ45_9GAMM Length = 177 Score = 171 bits (435), Expect = 6e-42, Method: Composition-based stats. Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 1/147 (0%) Query: 2 TPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLI 61 TP ++ +I++AL L+ L A TS R++ L + E F L+L Q+ I Sbjct: 32 TPAQQRIIEKALALLESRLIN-SDALTSPVRVRQYCQLQLGHERDEHFACLFLTAQHHAI 90 Query: 62 AGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQAL 121 + E F G+I+ V+PR +++R L NAAAV+L HNHPSG PS ADR IT RL +AL Sbjct: 91 SFEIQFRGSIDGAAVYPRVIVRRCLELNAAAVILVHNHPSGVSEPSPADRQITVRLQRAL 150 Query: 122 GLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L+D+RV DHLIV SFA+ GLL Sbjct: 151 ELIDVRVVDHLIVSAGDATSFAQAGLL 177 >UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobacteria RepID=Y510_VIBCH Length = 157 Score = 171 bits (434), Expect = 7e-42, Method: Composition-based stats. Identities = 70/144 (48%), Positives = 93/144 (64%), Gaps = 2/144 (1%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E +++ A + L + G A T+ A +E++ + ERE F +L L+NQN+LI + Sbjct: 16 ENEILEHAAEILANR-YVRGDALTNPDATKEYVRCKLGSYEREVFALLLLDNQNRLIEFK 74 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GT++ V+PREV+K L NAAAV+ AHNHPSG+ TPS+ADR ITERL L LV Sbjct: 75 ELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADRRITERLKDTLALV 134 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 D+RV DH IV G+ SFAE G L Sbjct: 135 DVRVLDH-IVTGDTCTSFAERGWL 157 >UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria RepID=Y1786_VIBCH Length = 158 Score = 170 bits (432), Expect = 1e-41, Method: Composition-based stats. Identities = 71/144 (49%), Positives = 96/144 (66%), Gaps = 2/144 (1%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E +++ A + L++ + G F T E+L +AG E E F VL+L+NQ++LI + Sbjct: 17 EHRVLEEAAEILEQR-YVRGETFARTENTTEYLRCKLAGYEHEIFAVLFLDNQHRLIEFK 75 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GT++ V+PREV+K AL NAAAV+ AHNHPSG+ PS+ADR IT+RL AL LV Sbjct: 76 ELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADRRITQRLKDALSLV 135 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 DIRV DH++VG + SFAE G L Sbjct: 136 DIRVLDHVVVGKSS-VSFAERGWL 158 >UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria RepID=Q0AJV4_NITEC Length = 167 Score = 170 bits (432), Expect = 1e-41, Method: Composition-based stats. Identities = 61/144 (42%), Positives = 92/144 (63%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 + +IQ+A+ L+ + + G +A R++L L + E F ++LN+Q+Q++A E Sbjct: 23 DDRIIQQAIALLEHRVFKAGPTLDGPKAVRDYLRLKLMAEPNEVFVAVFLNSQHQVLACE 82 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GT++ V+PR V++RAL NA+A++ +H HPSG PS ADR IT RL L ++ Sbjct: 83 CLFKGTVSEASVYPRVVVQRALELNASALIFSHQHPSGVAEPSMADRAITNRLKFILSMI 142 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 DIRV DH I+G + +SFAE GLL Sbjct: 143 DIRVVDHFIIGKGEPYSFAESGLL 166 >UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriaceae RepID=YICR_SALA4 Length = 221 Score = 170 bits (432), Expect = 1e-41, Method: Composition-based stats. Identities = 63/143 (44%), Positives = 94/143 (65%), Gaps = 1/143 (0%) Query: 6 RSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGET 65 + + + A + ++E A S RE+L + G ERE F V++L+ Q++++ Sbjct: 80 KGIAELARRYYSVRMNEES-ALLSPEMTREFLQSQLTGEEREIFLVIFLDAQHRVLQHSR 138 Query: 66 LFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVD 125 LF+GT+N EVHPRE+++ A+ NA+AV+LAHNHPSG PSKAD+LITER+++ +D Sbjct: 139 LFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADKLITERVIKCCQFMD 198 Query: 126 IRVPDHLIVGGNQVFSFAEHGLL 148 IRV DHLI+G + SFAE G + Sbjct: 199 IRVLDHLIIGRGEYVSFAERGWI 221 >UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0A3_9PROT Length = 205 Score = 169 bits (430), Expect = 2e-41, Method: Composition-based stats. Identities = 69/145 (47%), Positives = 96/145 (66%), Gaps = 3/145 (2%) Query: 4 GERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAG 63 + L+ RA L + + + + +++L L + G ++E F VL+L+ Q++LIA Sbjct: 64 AAKELVMRA---LSEDITQNPINLNNPVEVKKYLKLLLGGRQQEVFVVLFLDTQHRLIAA 120 Query: 64 ETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGL 123 E LF GT+ +T V+PREV+KRAL HNAAAV+LAHNHPSG PS+AD+L+T L QAL L Sbjct: 121 EELFHGTLTQTSVYPREVVKRALMHNAAAVLLAHNHPSGLAEPSQADQLLTNALKQALAL 180 Query: 124 VDIRVPDHLIVGGNQVFSFAEHGLL 148 VD+R DH I+G SFAE GL+ Sbjct: 181 VDVRALDHFIIGDESALSFAERGLI 205 >UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria RepID=Y3944_XANC8 Length = 225 Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats. Identities = 68/151 (45%), Positives = 96/151 (63%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLH---EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + AL+ +RHL E G A + + + + E F L+L+++ Sbjct: 74 LGPASACKLSAALELANRHLLSDLERGEALSDPSSVGRYFSQRLRARNYEVFAALFLDSR 133 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++ IA E LFTGTI+ E+HPREV++RAL HNAAAVV+ HNHPSG PS+ADR +T+RL Sbjct: 134 HRAIAFEELFTGTIDAAEIHPREVVRRALLHNAAAVVVGHNHPSGNPEPSEADRAVTQRL 193 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +QALGLVDIR+ DH ++G + S AE G + Sbjct: 194 LQALGLVDIRLLDHFVIGDGRPVSLAERGWV 224 >UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteobacteria RepID=Y2304_PARDP Length = 263 Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats. Identities = 62/151 (41%), Positives = 91/151 (60%), Gaps = 3/151 (1%) Query: 1 MTPG---ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P E +++ A + L R TS A ++ MA E E+FRVLYL+ + Sbjct: 113 LGPAVLQELKIVEAAAQRLARSRVMHRPVLTSWDALLDYCHTAMAHGEIEQFRVLYLDRK 172 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N LIA E GT++ V+PRE+++RAL +A+A++L HNHPSG+ TPS+AD +T R+ Sbjct: 173 NVLIADEEQARGTVDHVPVYPREIMRRALELSASALILVHNHPSGDPTPSQADIGMTNRI 232 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 V A ++ I V DHLI+G ++ SF GLL Sbjct: 233 VAAAEVMGIAVHDHLIIGRSRELSFRSEGLL 263 >UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepID=Y4094_ENTS8 Length = 230 Score = 169 bits (428), Expect = 3e-41, Method: Composition-based stats. Identities = 63/145 (43%), Positives = 93/145 (64%) Query: 4 GERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAG 63 + I + R A S R++L +A ERE F V++L++QN++I Sbjct: 86 AQLKAIGELARRYYRSRPCEETALLSPTITRDFLESQLAEQEREVFLVIFLDSQNRIIRQ 145 Query: 64 ETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGL 123 TLFTGT++ EVHPRE+++ A+ NAA ++LAHNHPSG PS+AD+++TER+V++ L Sbjct: 146 NTLFTGTLSHVEVHPREIVREAVRLNAAGIILAHNHPSGRAEPSRADKMVTERIVKSCQL 205 Query: 124 VDIRVPDHLIVGGNQVFSFAEHGLL 148 VDIRV DHL++G + SFAE G + Sbjct: 206 VDIRVLDHLVIGRGEYVSFAERGWI 230 >UniRef50_D2NHT0 Putative phage DNA repair protein n=1 Tax=Escherichia coli SE15 RepID=D2NHT0_ECOLX Length = 156 Score = 169 bits (428), Expect = 3e-41, Method: Composition-based stats. Identities = 68/148 (45%), Positives = 96/148 (64%), Gaps = 1/148 (0%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 T E ++ +A + R+ ++ GV S R +++ +A LE EEF ++ L+NQNQL Sbjct: 10 FTQRETRILDQARDIISRY-YQRGVQLCSPDDVRRCVMVELAPLEHEEFGIILLDNQNQL 68 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 + E LF GT+N VHPREVIKR L HNAAAV+L HNHPSGE PS+ D +T++L + Sbjct: 69 LHREILFRGTLNSVSVHPREVIKRVLKHNAAAVILVHNHPSGEPEPSRCDIQLTKKLQEL 128 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L ++D+R+ DH IV G + S AE GL+ Sbjct: 129 LEILDVRLLDHFIVAGTETVSMAERGLV 156 >UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacteria RepID=Q5E054_VIBF1 Length = 157 Score = 168 bits (426), Expect = 5e-41, Method: Composition-based stats. Identities = 67/144 (46%), Positives = 95/144 (65%), Gaps = 2/144 (1%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E +++ A + L + G AF++ A + +L + ERE F VL L+NQ++LI + Sbjct: 16 ENEILEHAAEILANR-YVRGDAFSNPTATQNYLRYKLGHYEREVFAVLLLDNQHRLIEFK 74 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GT++ V+PREV+K L NAAAV+ AHNHPSGE TPS+AD+ IT RL +AL L+ Sbjct: 75 ELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGESTPSQADKRITTRLKEALALI 134 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 D++V DH++VG SFAE GL+ Sbjct: 135 DVQVLDHIVVG-ETCVSFAERGLI 157 >UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. K31 RepID=B0T9F0_CAUSK Length = 223 Score = 167 bits (425), Expect = 7e-41, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 92/148 (62%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 + + L++ A + + R TS ++L MAGL REEF VL+L+ +NQL Sbjct: 76 LAAMDLKLLREAARRVTRADLAQRQLLTSFSQVADYLRALMAGLPREEFWVLFLDRRNQL 135 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 ++ E L G+++ V+PREV++RAL N +A++LAHNHPSG+ PS+ D +T+ L++A Sbjct: 136 LSAERLGVGSVDHAPVYPREVMRRALELNCSAMILAHNHPSGDPQPSQPDIEMTKTLIEA 195 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + I++ DH+IV G V SF +GL+ Sbjct: 196 GKALQIQIHDHMIVAGGAVVSFRANGLI 223 >UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8Q3_9BURK Length = 239 Score = 167 bits (425), Expect = 8e-41, Method: Composition-based stats. Identities = 73/152 (48%), Positives = 103/152 (67%), Gaps = 5/152 (3%) Query: 1 MTPGERS----LIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNN 56 + P +R+ +++ A + + + L E V F +A + +L L++A E F VL+L++ Sbjct: 89 LGPAKRAEIVAVLELARRAMAQRLQEREV-FADPQAVKHYLQLHLAAKGHEVFAVLFLDS 147 Query: 57 QNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITER 116 QN+L+A E LF GT+ +T V+PREV+ RAL+H AAAVVLAHNHPSG V PS+AD +T+ Sbjct: 148 QNKLLAMEELFRGTLTQTSVYPREVVIRALHHGAAAVVLAHNHPSGSVQPSRADEALTQT 207 Query: 117 LVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L AL LVD+RV DH+IVG Q S AE GL+ Sbjct: 208 LKAALALVDVRVLDHIIVGPGQALSMAETGLI 239 >UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax=Gammaproteobacteria RepID=Q47ZW8_COLP3 Length = 158 Score = 167 bits (424), Expect = 1e-40, Method: Composition-based stats. Identities = 68/144 (47%), Positives = 95/144 (65%), Gaps = 2/144 (1%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E ++ A + L AFTS++A +++L +A E E F V+ L+NQ+Q+I Sbjct: 17 ENQILDAAAEILACKYVRKD-AFTSSQATKDFLRFKLANKEHEIFAVMLLDNQHQMIDFV 75 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GTI+ + V+PREV+K L NAAAV+L HNHPSG +PS AD+ IT+RL +AL L+ Sbjct: 76 ELFRGTIDASAVYPREVVKTVLLENAAAVILTHNHPSGLNSPSIADKDITKRLQEALALI 135 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 D+RV DH+I+G SFAE+GLL Sbjct: 136 DVRVLDHIIIGEGTY-SFAENGLL 158 >UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacteria RepID=Q3JDF2_NITOC Length = 171 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 69/146 (47%), Positives = 93/146 (63%), Gaps = 1/146 (0%) Query: 3 PGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIA 62 P ++SL++ A L LH+PGV S R++L + +A + E F LYL+N++++I Sbjct: 27 PEKQSLLELAFAVL-HDLHQPGVELPSPNHTRDFLRMLLAERKAEVFGCLYLDNRHRVIE 85 Query: 63 GETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALG 122 LF GTI+ V+PR V+++AL NAAAV+ HNHPSG PS AD IT RL +AL Sbjct: 86 TVELFQGTIDGASVYPRVVVQQALSVNAAAVMFFHNHPSGVAEPSNADEAITRRLKEALA 145 Query: 123 LVDIRVPDHLIVGGNQVFSFAEHGLL 148 LVDIRV DH +V + SFAE GLL Sbjct: 146 LVDIRVLDHFVVTAGESISFAERGLL 171 >UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUN7_AERS4 Length = 296 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 69/147 (46%), Positives = 87/147 (59%), Gaps = 1/147 (0%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 T E+ +I A + R + S E+L A LE E F ++ L+NQ+++ Sbjct: 17 FTEREKRIIALAHSIIARRFTR-LDSLNSPEMVVEYLKTRFATLEHETFAMILLDNQHRV 75 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 I L GTI+ V+PREV+K AL HNAAAV+LAHNHPSG PS+ADR ITERL A Sbjct: 76 INAVDLSHGTIDSAAVYPREVVKTALKHNAAAVILAHNHPSGVAEPSRADRQITERLQAA 135 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGL 147 L LVDIRV DH++V G SFA G Sbjct: 136 LDLVDIRVLDHIVVAGENSMSFAVRGF 162 >UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomonas RepID=Q3BQ28_XANC5 Length = 187 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 70/143 (48%), Positives = 91/143 (63%), Gaps = 1/143 (0%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E ++ A L++ L G S A ++LI A L E F V++L+ ++Q++A E Sbjct: 45 EEGILLAAATILEQRLQRQG-KIHSPDQAGDYLISRCAHLPHEVFGVVFLDIKHQILATE 103 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GTI+ EVHPR V KRAL NAAAV+L HNHPSG PS+ADR +TERL +AL L+ Sbjct: 104 HLFFGTIDGCEVHPRVVAKRALDLNAAAVILFHNHPSGNPEPSEADRKVTERLQKALSLL 163 Query: 125 DIRVPDHLIVGGNQVFSFAEHGL 147 DIRV DHL++GG Q S A G Sbjct: 164 DIRVLDHLVIGGRQHISLAARGW 186 >UniRef50_B1HKP9 DNA repair protein n=1 Tax=Burkholderia pseudomallei S13 RepID=B1HKP9_BURPS Length = 165 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 63/148 (42%), Positives = 93/148 (62%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 +T E LI A+ L+R L + G A TS + A ++L L M +RE F V++L+ +++ Sbjct: 18 LTSAEHQLIHDAIAVLERRLFQRGPALTSPQNAIDYLRLTMTREDREVFTVIFLDTHHRV 77 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 IA E LF G I+ + R ++ RA+ N+ A+++AHNHPSGE PS AD+ +T L Sbjct: 78 IAVEPLFYGGIDGAHISSRVILHRAILLNSTAIIVAHNHPSGETQPSPADQRLTAELAAL 137 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L LVD+R+ DH I+G + FSFA+ GLL Sbjct: 138 LRLVDMRLLDHFIIGRGEPFSFAQAGLL 165 >UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacteria RepID=Y2732_RALEJ Length = 228 Score = 166 bits (422), Expect = 2e-40, Method: Composition-based stats. Identities = 68/143 (47%), Positives = 96/143 (67%), Gaps = 1/143 (0%) Query: 6 RSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGET 65 +++ + A + L L P S A R +L L +A L +E F L+L+ +N++IA E Sbjct: 83 QAVPELARRMLAESLELPS-GLDSPAAVRSYLRLTLAPLAQEVFVCLFLDTRNRMIASEE 141 Query: 66 LFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVD 125 LF GT+N+T V+PREV +RAL HNAA+V++AHNHPSG TPS++D +T L +AL L+D Sbjct: 142 LFRGTLNQTAVYPREVARRALAHNAASVIVAHNHPSGCCTPSQSDLQMTRMLARALDLID 201 Query: 126 IRVPDHLIVGGNQVFSFAEHGLL 148 +R+ DH +V G V SFAEHG L Sbjct: 202 VRLLDHFVVAGTHVHSFAEHGEL 224 >UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiaceae RepID=Y2712_RALPJ Length = 224 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 63/151 (41%), Positives = 95/151 (62%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHE---PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 M P + + + L+ R L E G F S ++ +++L L + E F +L+ + Sbjct: 74 MGPAKYAQLHALLEVARRALKEDFTQGQTFESAQSVKDFLRLTLGHRPHEVFACFFLDVR 133 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++LIA E LF GT+ V+PRE+ KRAL+HNAAAV+LAHNHP+G PS++D ++T L Sbjct: 134 HRLIAWEELFRGTLTEARVYPREIAKRALHHNAAAVILAHNHPTGNTEPSESDVILTREL 193 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +AL ++D+ V DH+IVG N V+ F EHG + Sbjct: 194 CRALAMLDVIVLDHMIVGRNHVYGFLEHGKM 224 >UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicutes RepID=Y4299_BACWK Length = 225 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 51/148 (34%), Positives = 85/148 (57%), Gaps = 3/148 (2%) Query: 4 GERSLIQRAL---KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 + S + A + + R ++ + S +++ M L++E F LYLN +NQ+ Sbjct: 78 AKASQLMAAFELGRRMVRLEYQNRYSIRSPEDCASYMMEEMRFLQQEHFVCLYLNTKNQV 137 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 I +T+F G++N + VHPREV K A AA+++ HNHPSG+ PS+ D +T+RLV+ Sbjct: 138 IHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDIEVTKRLVEC 197 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++ I V DH+I+G ++ S E G + Sbjct: 198 GRIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacteriaceae RepID=Y101_ENT38 Length = 221 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 58/142 (40%), Positives = 88/142 (61%), Gaps = 4/142 (2%) Query: 11 RALKTLDRHLHEPGV----AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 + + L R H V S +++L ++ ERE F V++L+NQ++++ + Sbjct: 80 KGIAELARRYHSVRVLGDNPLLSPEMTKDFLQSQLSDAEREVFMVIFLDNQHRVVKHSRM 139 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 F+GT+ EVHPRE+++ A+ NAAAV+LAHNHPSG PSKAD+ ITER+++ +DI Sbjct: 140 FSGTLRHVEVHPREIVREAIKVNAAAVILAHNHPSGCAEPSKADKDITERIIKCCQFMDI 199 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 V DH I+G + SFAE G + Sbjct: 200 HVLDHFIIGRGEYVSFAEQGWI 221 >UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVH2_DESAS Length = 227 Score = 165 bits (419), Expect = 4e-40, Method: Composition-based stats. Identities = 51/148 (34%), Positives = 86/148 (58%), Gaps = 3/148 (2%) Query: 4 GERSLIQRALKTLDRHLHEPGV---AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 + ++ A++ R + + + A +++ M ++RE F+ L LN +N++ Sbjct: 80 SKALALKAAVEIGQRIAKTKAMECPSVKTPDDAVNYVMEEMRYMDREHFKALLLNTKNRV 139 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 I+ E + GT+N + VHPRE+ K A+ +AAA++L HNHPSG+ TPS+ D +TERL +A Sbjct: 140 ISLEAISVGTLNSSNVHPRELFKVAIKRSAAAIILIHNHPSGDPTPSREDIDVTERLGEA 199 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +V I V DH+++G + S GL Sbjct: 200 GKIVGIDVLDHIVIGDGKFVSLKAKGLF 227 >UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonadales RepID=Y523_GEOLS Length = 230 Score = 165 bits (418), Expect = 4e-40, Method: Composition-based stats. Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRAL---KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + + I+ A K E FTS ++ + +E F L L+ + Sbjct: 80 LGLAKAASIKAAFTLGKRFQARRLETLERFTSPAQVFDFFHHELRDNRKELFLTLLLDGK 139 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N++ + G++N++ VHPREV A+ +AAAV+ HNHPSG+ PS+ D IT RL Sbjct: 140 NRITRKVQVSEGSLNQSIVHPREVFAPAVRESAAAVIFIHNHPSGDPAPSREDHEITRRL 199 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A ++ I+V DH+I+G FSF E GLL Sbjct: 200 NEAGEILGIKVLDHIIIGDGAYFSFVESGLL 230 >UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcinaceae RepID=Y2303_METBF Length = 229 Score = 165 bits (418), Expect = 4e-40, Method: Composition-based stats. Identities = 46/145 (31%), Positives = 84/145 (57%) Query: 4 GERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAG 63 + + + + L+ + EP S + + M ++E+F L L+ +NQ++ Sbjct: 84 AQIAAVFELARRLETFVEEPKRKVCSPKDVYTLMYPKMREQKKEKFITLCLDTKNQILKE 143 Query: 64 ETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGL 123 E + G++N + VHPREV K AL ++A+V++ HNHPSG+ +PS+ D ++TE++V+ L Sbjct: 144 EVVSIGSLNASIVHPREVFKSALMESSASVIMIHNHPSGDPSPSREDIMVTEKMVEGGKL 203 Query: 124 VDIRVPDHLIVGGNQVFSFAEHGLL 148 + I V DH+I+G + S + G + Sbjct: 204 LGIDVLDHIIIGEGRYVSLKDEGFV 228 >UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales RepID=C9L5T8_RUMHA Length = 231 Score = 165 bits (418), Expect = 4e-40, Method: Composition-based stats. Identities = 43/135 (31%), Positives = 78/135 (57%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 K + + G++F + ++ + + E+E + L+ +N L+ E +F GT+N Sbjct: 97 KRIATATAKKGLSFRHPASIADYYMEQLRHEEQELLICMMLDTKNHLLGDEMIFKGTVNS 156 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 + +PRE+ A+ ++A ++L HNHPSG+ TPS+AD T+R+ +A L+ I + DH+I Sbjct: 157 SLANPREIFLSAVSYHAVGILLVHNHPSGDCTPSQADVDFTQRVKEAGELLGIPLLDHII 216 Query: 134 VGGNQVFSFAEHGLL 148 +G + SF E G+ Sbjct: 217 IGDCKYLSFREQGIF 231 >UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID=Y065_PELCD Length = 227 Score = 165 bits (418), Expect = 5e-40, Method: Composition-based stats. Identities = 48/145 (33%), Positives = 79/145 (54%) Query: 4 GERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAG 63 E + + R+ PG +TS +A + +RE F L L+++N+L+ Sbjct: 83 AELQAVFELARRFGRNPLRPGDRYTSPQAVFAHFHERLRDHKRERFIALLLDSKNRLLRE 142 Query: 64 ETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGL 123 + G++ + VHPR+V + +AAAV+ HNHPSG+ +PS+ D IT+RL + L Sbjct: 143 VGISEGSLTASIVHPRDVFAPVVRESAAAVLFVHNHPSGDPSPSREDLDITQRLREVGEL 202 Query: 124 VDIRVPDHLIVGGNQVFSFAEHGLL 148 + +RV DH+I+G S A+ G+L Sbjct: 203 MGVRVLDHIIIGDEGYVSLADRGVL 227 >UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WXL6_ALIAD Length = 233 Score = 164 bits (417), Expect = 6e-40, Method: Composition-based stats. Identities = 44/151 (29%), Positives = 87/151 (57%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPG---VAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + I A++ R +P + A ++++ + L++E F L L+ + Sbjct: 79 IGPAKAVQIAAAVELGRRVARKPPGEKRQIRTAEDAAKYVMDRLRYLKKEHFVTLLLDTK 138 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++++A +T G+++ + VHPRE+ +RA+ +A++++ HNHPSG+ +PS D +T+RL Sbjct: 139 HRVLAEDTSSVGSLDASIVHPREIFRRAIRISASSILCIHNHPSGDPSPSPEDIAVTKRL 198 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 V+A ++ I V DH+++G + S G L Sbjct: 199 VEAGRVLGIEVLDHIVIGDGRFVSLRAEGYL 229 >UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria RepID=Q0ACW7_NITEC Length = 173 Score = 164 bits (416), Expect = 9e-40, Method: Composition-based stats. Identities = 63/147 (42%), Positives = 89/147 (60%) Query: 2 TPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLI 61 T +I A + + A T A ++ + G E E F +++LN+Q +LI Sbjct: 27 TVASDEMIFTATRAAIERKYPANTAMTKPEIAADYFKNKLNGFEHEVFSIIFLNSQYRLI 86 Query: 62 AGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQAL 121 A +F GT+ V+PREV+K A+ +NAAAV+LAH HPS E PS+AD+ IT+RL +AL Sbjct: 87 AYREMFQGTLTCASVYPREVVKAAISYNAAAVILAHCHPSKETEPSQADKAITKRLKEAL 146 Query: 122 GLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L+D+ V DH+IVGGN S AE GL+ Sbjct: 147 DLIDVCVLDHIIVGGNTTKSMAEMGLV 173 >UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadales RepID=A0R7V6_PELPD Length = 168 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 53/154 (34%), Positives = 86/154 (55%), Gaps = 8/154 (5%) Query: 2 TPGERSLIQRALKTLDRHLHEPGVA-------FTSTRAAREWLILNMAGLEREEFRVLYL 54 TP + ++ ++++ R A FTS + E ++ +E F L+L Sbjct: 16 TPATKRIVLKSIEARYRKEAVREDAPEWVTTRFTSPKQVFELFK-DLIYETKEHFITLHL 74 Query: 55 NNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLIT 114 + +N+++ + + G++N++ VHPREV K AL NAAA++ H HPSG+ PS D IT Sbjct: 75 DGKNRIMCMDRVSIGSLNQSIVHPREVFKTALLSNAAAIICVHQHPSGDPNPSSEDLSIT 134 Query: 115 ERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +RL +A ++ IRV DH++VG SF E GL+ Sbjct: 135 KRLKEAGEIMGIRVLDHIVVGHEDYISFVEKGLM 168 >UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax=uncultured archaeon RepID=D1JB12_9ARCH Length = 330 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 95/151 (62%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFT---STRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + + I+ + +L E + + +++ ++L L M L+ E F+V++L++ Sbjct: 161 VGAAKVAQIKAVQALAEEYLKESMKSVSKVRNSKEVFDYLYLTMRDLKIEIFKVIFLDSA 220 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 NQ I E LF GT+N + V+PRE++K A+ NAA+++ HNHPSG+ TPS +DR ITE L Sbjct: 221 NQTIDDENLFEGTLNASSVYPREIVKSAVNKNAASLIFVHNHPSGDPTPSGSDRAITEDL 280 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + A LV I V DH+I+G N FSFA+ GLL Sbjct: 281 IYACNLVQITVLDHIIIGDNVYFSFADEGLL 311 >UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrueckii subsp. bulgaricus RepID=Q04B84_LACDB Length = 204 Score = 163 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 1/148 (0%) Query: 2 TPGERSL-IQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 P + SL I+ A+ L R + + +L + G ++E+F VLY + Q L Sbjct: 57 CPNDLSLTIEVAMDRLRRTDMRRSSDWAGSSKIGNYLANKLLGQKQEQFWVLYFDQQQNL 116 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 + + LF GT++R+ VHPRE+ + A+ + A++++AHNHPSG +TPS D +T+ L +A Sbjct: 117 LGEKMLFQGTLDRSWVHPREIFRWAVVYGCASIIVAHNHPSGALTPSDNDLELTKGLKKA 176 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++ I DH I+GG + S E L Sbjct: 177 SKIMKITFLDHFIIGGGEYLSLRERELF 204 >UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID=Y1530_RUBXD Length = 227 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 62/151 (41%), Positives = 89/151 (58%), Gaps = 4/151 (2%) Query: 1 MTPGERSLIQRALKTLDR--HLHEPG-VAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + ++ AL+ R PG +S L +A L+RE F V+ LN + Sbjct: 78 IGEAKACILLAALELARRLSVARNPGRPVISSPADVDGLLRGRIANLDREHFVVVLLNTK 137 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N++I T+ GT++ + VHPREV K A+ +AA+VVLAHNHPSG V PS+ DR +T R+ Sbjct: 138 NEVIEAPTISVGTLSSSLVHPREVFKPAIRASAASVVLAHNHPSGRVEPSREDREVTGRV 197 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A G++ I V DH+IVG FS EHG+L Sbjct: 198 AEAGGIIGIEVLDHVIVG-EGYFSMKEHGML 227 >UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5M2_9BACL Length = 162 Score = 162 bits (410), Expect = 4e-39, Method: Composition-based stats. Identities = 49/149 (32%), Positives = 86/149 (57%), Gaps = 1/149 (0%) Query: 1 MTPGERSLIQRALKTLDRHLH-EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQ 59 + P R ++ L+ + + + E + + + ++ GL++E F +L LN +N+ Sbjct: 14 LPPRRRKQAEKLLELIRKVMEGEKDHYIHTPADVFQAVATDLVGLDKEHFMILILNTKNR 73 Query: 60 LIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQ 119 +++ E + GT+N VHPREV K A+ AA+++ HNHPSG+ PS D+ +TERL+Q Sbjct: 74 ILSKEVISIGTLNSAIVHPREVFKPAIIKGAASIICVHNHPSGDPAPSSEDKKLTERLIQ 133 Query: 120 ALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A ++ I V DH+++G S E G++ Sbjct: 134 AGEIIGIDVLDHVVIGTEGYVSLKEQGMI 162 >UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaproteobacteria RepID=Y7200_HAEIE Length = 221 Score = 162 bits (410), Expect = 4e-39, Method: Composition-based stats. Identities = 64/144 (44%), Positives = 89/144 (61%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 + I K + + +L+ + ERE F VL+L+NQ++LI E Sbjct: 78 QLQAITEMTKRYLKQEMLSTPIINDPETVKLFLLTELQHEEREVFMVLFLDNQHRLIKKE 137 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GTIN + V+PRE+IK ALY NAAA++LAHNHPSG PS +D+LIT+++ A L+ Sbjct: 138 RLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGVTEPSYSDQLITKKIQDAAELM 197 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 +I V DHLIVG + +SFAE+ LL Sbjct: 198 EICVLDHLIVGKSDCYSFAENCLL 221 >UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR9_THEYD Length = 224 Score = 161 bits (409), Expect = 5e-39, Method: Composition-based stats. Identities = 51/150 (34%), Positives = 86/150 (57%), Gaps = 2/150 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVA--FTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 + + + I+ + + R L E F S + + GL++E F L L+ + Sbjct: 75 LGIAKIAQIKASFELGKRALCEKSQEQFFNSAEIVYNYFFPKLNGLKKEVFITLLLDTKL 134 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 +LI + GT+N++ +HPREV K A+ +A AV+L HNHPSG+ TPS+ D IT++L Sbjct: 135 RLIREVKVSEGTLNQSLIHPREVFKDAVKESAYAVILIHNHPSGDPTPSEQDIEITKKLK 194 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A +++I + DH+I+G + FS E G++ Sbjct: 195 KASEILEIPILDHVIIGSGKYFSMKERGVV 224 >UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcus RepID=Y1555_STAAE Length = 228 Score = 161 bits (409), Expect = 5e-39, Method: Composition-based stats. Identities = 48/135 (35%), Positives = 76/135 (56%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 + + R + T +++I M L +E F +L LN++N +I +F GT+N Sbjct: 90 ERMGRRAENNRIKITQPSDVADYMIPTMKDLTQEHFVILLLNSKNVVIKETCVFKGTLNS 149 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 + VHPRE+ A+ NA A++ HNHPSG+VTPS+ D + T RL + ++ I + DH+I Sbjct: 150 SIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDIITTMRLKECGLILGIDLLDHII 209 Query: 134 VGGNQVFSFAEHGLL 148 +G N+ S E G Sbjct: 210 IGDNRFTSLVEAGYF 224 >UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular organisms RepID=Y3252_RHOFD Length = 234 Score = 161 bits (408), Expect = 7e-39, Method: Composition-based stats. Identities = 67/151 (44%), Positives = 97/151 (64%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P +R+ + L+ R L + F + A + +L L++A E F VL+L+ Q Sbjct: 84 LGPAKRAELVAVLELSRRALAQQLKERTIFATPDAVKHYLQLHLAAKPHEVFAVLFLDVQ 143 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N+L+A E LF GT+ +T V+PREV+ RAL+H A++VVLAHNHPSG V PS+AD ++T+ L Sbjct: 144 NRLLALEELFRGTLTQTSVYPREVVLRALHHQASSVVLAHNHPSGTVQPSRADEMLTQTL 203 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L L+D+RV DH+IV + S AE GLL Sbjct: 204 KTTLALIDVRVLDHVIVAPGEALSMAERGLL 234 >UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobacteria RepID=Y700_RHOP2 Length = 250 Score = 161 bits (408), Expect = 8e-39, Method: Composition-based stats. Identities = 54/139 (38%), Positives = 83/139 (59%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E L+ A + + + +S A ++ MA +RE+FR+L+L+ +NQLIA E Sbjct: 107 EIKLVAAAAARVTKGQVKSRTVLSSWSAVIDYCRTTMAFADREQFRILFLDKRNQLIADE 166 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 GT++ T V+PRE++KRAL +A AV++ HNHPSG+ TPS+AD +T+ +V + Sbjct: 167 LQQVGTVDHTPVYPREIVKRALELSATAVIMVHNHPSGDPTPSQADIQMTKTIVAIAEPL 226 Query: 125 DIRVPDHLIVGGNQVFSFA 143 + V DH+IVG N S Sbjct: 227 GVAVHDHIIVGKNGHASLK 245 >UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S8K4_HAHCH Length = 207 Score = 161 bits (407), Expect = 9e-39, Method: Composition-based stats. Identities = 65/144 (45%), Positives = 91/144 (63%), Gaps = 2/144 (1%) Query: 6 RSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGET 65 +I A LD G AF A + +L+L +A E+E F ++L+NQN+LI+ E Sbjct: 63 DKIISIAKHILDGRFFR-GKAFCDPDATKYYLVLQLAEHEQEVFACMFLDNQNRLISFEK 121 Query: 66 LFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVD 125 LF GTI++ V+PRE++KRAL NAAAV+LAHNHPSG PS AD +T+ + +L L+D Sbjct: 122 LFYGTIDQASVYPREIVKRALMLNAAAVILAHNHPSGMSEPSVADIAMTKTVKSSLALID 181 Query: 126 IRVPDHLIVG-GNQVFSFAEHGLL 148 +RV DH++VG SF E G + Sbjct: 182 VRVLDHIVVGSDGSSVSFIERGYM 205 >UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium RepID=B1YJT0_EXIS2 Length = 217 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVA---FTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + I L+ R + EP S A E L+ M ++E F LYLN + Sbjct: 67 VGKAKALQIMAGLELGRRLVTEPKWVRPVVRSPDDAAELLMEEMRLYQQEHFICLYLNTK 126 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N++I+ +TLF G +N + VHPR++ + A+ +AA+ + HNHPSG+ TPS+ D ++ER+ Sbjct: 127 NEVISKKTLFIGGLNTSIVHPRDIFREAIRCSAASFIAVHNHPSGDPTPSREDIEVSERM 186 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 V+A L+ I DHL++G Q S + G + Sbjct: 187 VEAGRLIGISCIDHLVIGHGQFISMKQRGFM 217 >UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAN5_HAHCH Length = 183 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 63/141 (44%), Positives = 91/141 (64%) Query: 8 LIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLF 67 +++ A + L + +E+L++++A RE F L+L+ QN+LIA E LF Sbjct: 31 VLKAAKRALAQRFKRHSCHMDDPGKVKEYLMMHLAPEPRETFVGLFLDTQNRLIAYEVLF 90 Query: 68 TGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIR 127 G I+ ++PREV+K AL HNAA V++AHNHPSG+ PS D+LIT RL+QAL LV+I Sbjct: 91 RGAIDEAHIYPREVVKAALRHNAAKVIVAHNHPSGDPKPSVNDQLITYRLLQALMLVEIP 150 Query: 128 VPDHLIVGGNQVFSFAEHGLL 148 + DH +VGG+QV S A G+ Sbjct: 151 LIDHFVVGGDQVVSMAAQGIF 171 >UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. DG881 RepID=B4X5D3_9GAMM Length = 164 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 59/143 (41%), Positives = 88/143 (61%), Gaps = 1/143 (0%) Query: 6 RSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGET 65 ++ A L L A T+ ++L + +A + E F ++LNN++++++ E Sbjct: 23 EEIVSTAATILLNELTGR-EALTAPTDVAQFLQMALAQEKNEVFAAIFLNNKHKVLSFEP 81 Query: 66 LFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVD 125 LF+GTI+ V+PR V+++AL NAAAV+ AHNHPSG PS+ADR IT RL AL L+D Sbjct: 82 LFSGTIDGAAVYPRVVVQQALACNAAAVIFAHNHPSGCCEPSQADRTITTRLKDALALID 141 Query: 126 IRVPDHLIVGGNQVFSFAEHGLL 148 +RV DH +V ++ S AE G L Sbjct: 142 VRVLDHFVVSRSEWVSLAERGWL 164 >UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y7_9BURK Length = 198 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 74/140 (52%), Positives = 97/140 (69%), Gaps = 3/140 (2%) Query: 12 ALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFT 68 A + L R++ G S + ++WL + AGLE E F VLYL+ Q LI E LF Sbjct: 59 ARELLLRNMRSKMLEGPVMASPKVVKDWLSMYCAGLEHEVFLVLYLDAQQVLIEAEELFR 118 Query: 69 GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRV 128 GT+ +T V+PREV+K AL HNAAAV+LAHNHPSG+++PS AD L+T+ L +L +VD+RV Sbjct: 119 GTLTQTSVYPREVVKNALAHNAAAVLLAHNHPSGQLSPSGADELLTQTLKSSLMMVDVRV 178 Query: 129 PDHLIVGGNQVFSFAEHGLL 148 DH IVGG++V SFAE GLL Sbjct: 179 LDHFIVGGDRVLSFAEQGLL 198 >UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobacteria RepID=Y056_PSYIN Length = 225 Score = 160 bits (405), Expect = 1e-38, Method: Composition-based stats. Identities = 60/151 (39%), Positives = 93/151 (61%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + +Q L+ R+L EP G A TS + +LI M L E F + L+ Q Sbjct: 75 LGQAKYVQLQAVLEMSSRYLQEPLSKGNALTSAAQTKAFLIAKMHNLPYEVFAAILLDTQ 134 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 +++I F G+I+ VHPR + ++ L NAAA++L HNHPSG+ + S+AD++IT+++ Sbjct: 135 HRIIRFHEFFFGSIDCATVHPRIIAQKVLSENAAAIILVHNHPSGDPSASEADKMITQKI 194 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 V AL L+D+RV DHL+VG + SFAE+G + Sbjct: 195 VSALQLIDVRVLDHLVVGHKKCTSFAENGWI 225 >UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E733_MACCJ Length = 223 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 51/142 (35%), Positives = 82/142 (57%), Gaps = 1/142 (0%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 ++I+ A++ + H E + S A L+ + + +E F VL LN +N ++ T+ Sbjct: 83 AIIELAIR-MHTHTKETRIKVKSPACAANLLMERLRYMTQEHFIVLSLNTKNIVMHESTI 141 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 F G++N + VHPREV K A+ +AAA+++ HNHPSG+ PS D T+RL++ + I Sbjct: 142 FIGSLNASIVHPREVFKEAVKRSAAAIIVVHNHPSGDPEPSYEDIEATKRLIKCGEIFGI 201 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 V DH+I+G S E G+L Sbjct: 202 DVLDHIIIGDGYYVSIKEKGIL 223 >UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacteria RepID=B0T9R6_CAUSK Length = 253 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 61/121 (50%), Positives = 84/121 (69%) Query: 28 TSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALY 87 +S A ++L L MA ERE FRVL+L+ +NQLIA E L GT++ V+PREV++RAL Sbjct: 133 SSWTALIDYLKLTMAHCEREAFRVLFLDKKNQLIADEILNHGTVDHAPVYPREVVRRALE 192 Query: 88 HNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGL 147 +A+AV+L HNHPSG+ TPS AD +T+++V A + I V DH+IVG +V SF GL Sbjct: 193 VSASAVILVHNHPSGDQTPSSADIEMTKKVVDAARTLGIAVHDHVIVGRAEVASFKALGL 252 Query: 148 L 148 + Sbjct: 253 I 253 >UniRef50_C4SWK5 DNA repair protein n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4SWK5_YERIN Length = 152 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 68/144 (47%), Positives = 95/144 (65%), Gaps = 1/144 (0%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E ++Q+A ++ G ST A RE+L +A LE E F VL L+NQ++++A E Sbjct: 10 EDLILQQAQSIIENRYIR-GDKMFSTEAVREYLKFKLAPLEHEVFSVLLLDNQHRILAYE 68 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GT+N ++PRE++K +L +NA A++L HNHPSGE PS AD+ IT +L LGL+ Sbjct: 69 ELFRGTLNAVSIYPREIVKLSLRYNAGAIILVHNHPSGEPEPSHADKEITNKLKSVLGLL 128 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 D++V DHLIV G QV S AE GL+ Sbjct: 129 DVQVLDHLIVAGTQVVSLAERGLV 152 >UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R890_9FIRM Length = 227 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 52/147 (35%), Positives = 86/147 (58%), Gaps = 4/147 (2%) Query: 6 RSLIQRALKTLDRHLH----EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLI 61 +++ +A L + + + A +S + EWL+ + ++E F V++LN +NQ++ Sbjct: 78 KAIELQAAFALGKRIAFDVLKESEAISSPQKLSEWLMQQIGFQQQEHFLVVFLNQRNQIL 137 Query: 62 AGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQAL 121 A +TLF GT+ VHPRE+ K A+ A ++ AHNHPSG S AD IT+++++ Sbjct: 138 AYKTLFVGTLTSANVHPREIFKEAMRIGCAKIICAHNHPSGNPQVSDADIAITQQIMECG 197 Query: 122 GLVDIRVPDHLIVGGNQVFSFAEHGLL 148 LV I + DH++VGGN+ S E G + Sbjct: 198 QLVSIPLLDHIVVGGNRYVSLREEGYM 224 >UniRef50_B0RXB0 DNA repair protein radC homolog n=3 Tax=Xanthomonas campestris pv. campestris str. B100 RepID=B0RXB0_XANCB Length = 159 Score = 159 bits (403), Expect = 2e-38, Method: Composition-based stats. Identities = 67/143 (46%), Positives = 92/143 (64%), Gaps = 1/143 (0%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 + ++ A L++ L G S A +L+ A L E F V++L+NQ+ ++A E Sbjct: 17 QEGILLAAATILEQRLQRQGR-IHSPDQAGSYLVARCAHLSHEIFGVVFLDNQHHILAAE 75 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF+GTI+ E+HPR V KRAL NAAAV+L HNHPSG PS+ADR +T+RL +ALGL+ Sbjct: 76 HLFSGTIDGCEIHPRVVAKRALELNAAAVILFHNHPSGNPEPSEADRKVTQRLQEALGLL 135 Query: 125 DIRVPDHLIVGGNQVFSFAEHGL 147 DIRV DHL++GG + S A G Sbjct: 136 DIRVLDHLVIGGQKSVSLAARGW 158 >UniRef50_Q02HM7 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa UCBPP-PA14 RepID=Q02HM7_PSEAB Length = 202 Score = 159 bits (403), Expect = 2e-38, Method: Composition-based stats. Identities = 62/144 (43%), Positives = 84/144 (58%), Gaps = 5/144 (3%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E L+QRA+ L+R + G S R R++L L + G E F ++L+ Q Sbjct: 64 EDQLVQRAIAVLERRMFRRGQELLSPRGLRQYLRLRLVGKSEEVFAAVFLDAQ-----WR 118 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GT+N ++ R V+KRAL HNA VV+AHNHPSG TPS+AD T +L AL LV Sbjct: 119 ALFRGTVNAAPMYARVVVKRALRHNAVGVVVAHNHPSGLATPSQADIAATRQLKAALNLV 178 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 DI + DH ++G + FSF + LL Sbjct: 179 DIELLDHFVIGRGEPFSFFDAQLL 202 >UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLJ1_9FIRM Length = 233 Score = 159 bits (403), Expect = 3e-38, Method: Composition-based stats. Identities = 47/147 (31%), Positives = 77/147 (52%), Gaps = 4/147 (2%) Query: 6 RSLIQRALKTLDRHLHEPGVA----FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLI 61 +++ L L + L F+S R ++ + +M RE ++++LN + +LI Sbjct: 85 KAIQLVCLSELSKRLARTSTVGKLDFSSPRTIADYYMEDMRHRTREILKLIFLNTRCRLI 144 Query: 62 AGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQAL 121 + GTI+ V PRE+ A NA ++L HNHP G+ TPS+ D +IT R+ +A Sbjct: 145 GECNVSEGTIDSALVSPRELFIEAFKRNAYGIILLHNHPGGDPTPSREDVMITRRIYEAG 204 Query: 122 GLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L+ IR+ DH+++G N S E G Sbjct: 205 ELLGIRLFDHIVIGDNCFVSMKEKGFF 231 >UniRef50_Q5DY97 DNA repair protein RadC n=17 Tax=Proteobacteria RepID=Q5DY97_VIBF1 Length = 165 Score = 159 bits (402), Expect = 3e-38, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 87/148 (58%), Gaps = 1/148 (0%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 T E+ ++ A ++ + A TS A E + + ERE F +L L+NQ++L Sbjct: 19 FTENEKMILAEAASIIEVKIRNTS-ALTSPDLAAELCVNRLVHQEREVFAILMLDNQHRL 77 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 I G+I+ V+PREV+K L++NAAAV+ AHNHPSG PS ADR IT RL A Sbjct: 78 IKFVEHSVGSISSASVYPREVLKSVLHYNAAAVIFAHNHPSGVAEPSDADRRITARLSSA 137 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L L+D++V DH ++G + SFA+ G + Sbjct: 138 LELIDVKVLDHFVIGVGETVSFAKRGWI 165 >UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S9N8_PROA2 Length = 165 Score = 158 bits (401), Expect = 4e-38, Method: Composition-based stats. Identities = 56/124 (45%), Positives = 79/124 (63%), Gaps = 1/124 (0%) Query: 26 AFTSTRAAREW-LILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKR 84 A T A ++ + + EEF LYL+ +N++I E + GT+N + VHPREV K Sbjct: 42 AITRCDIAYDFFCKIGLQDKASEEFYALYLDTKNKIIGLEMISRGTLNASLVHPREVFKG 101 Query: 85 ALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAE 144 A NA +++LAHNHPSG PS AD+L+T RLV+A L+D++V DH+IVG +SF E Sbjct: 102 AFLANANSIMLAHNHPSGNTEPSSADKLVTSRLVKAGKLLDLQVLDHIIVGDKGYYSFRE 161 Query: 145 HGLL 148 GL+ Sbjct: 162 SGLI 165 >UniRef50_B1I0K4 DNA repair protein radC-like protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0K4_LYSSC Length = 204 Score = 158 bits (401), Expect = 4e-38, Method: Composition-based stats. Identities = 44/142 (30%), Positives = 84/142 (59%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 ++ LK ++ + ++ A E+++ M L++E F L+L+ ++++I ET+ Sbjct: 63 RAVKGLLKIMNSERQGKVKSISNASEAAEYVMDEMKNLKQEHFVCLFLDTRSRVIKKETI 122 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 F G++N + PRE+++ AL ++AA ++ HNH SG+ PS D +T RL +A L+ + Sbjct: 123 FIGSLNSSIASPREIMRLALKYSAAGIICLHNHCSGDSEPSMQDLEVTRRLFEAGDLMGV 182 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 + DH+++G N+ S E+ LL Sbjct: 183 ELIDHIVIGNNEFTSIRENNLL 204 >UniRef50_B1JAY7 DNA repair protein RadC n=4 Tax=Pseudomonas RepID=B1JAY7_PSEPW Length = 164 Score = 158 bits (401), Expect = 4e-38, Method: Composition-based stats. Identities = 61/144 (42%), Positives = 94/144 (65%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E +LI AL+ LD+ + G + A +L L +A E F +L L++++++++ + Sbjct: 21 EDALITGALQLLDQRHFQRGEVLITPADAAAYLKLQLAPYHHEVFALLCLDSRHRVLSFD 80 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LFTG+I+ V+PR+V+ +AL NAAAV+ +HNHPSG PS ADR++T RL +AL LV Sbjct: 81 ILFTGSIDGASVYPRQVVIKALERNAAAVIFSHNHPSGCSEPSGADRVLTTRLTEALALV 140 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 ++RV DH+IVG S AE+G + Sbjct: 141 EVRVLDHIIVGEGTPLSLAEYGWM 164 >UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales RepID=C6LCB9_9FIRM Length = 231 Score = 158 bits (401), Expect = 5e-38, Method: Composition-based stats. Identities = 46/135 (34%), Positives = 81/135 (60%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 + + + + G FTS +A ++ + + L++E +L + + +L++ +T+ GT+N+ Sbjct: 96 RRIAKSVASEGNTFTSAQAIADYYMEDFRHLQQERVFLLSFDTKGELLSEKTISVGTVNQ 155 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 + V PRE+ AL A V+L HNHPSG PS DRL+T R+ ++ L++I + DH+I Sbjct: 156 SCVSPREIFLEALSCRAVYVILLHNHPSGNPQPSPEDRLLTMRVHESGKLLEIPLMDHII 215 Query: 134 VGGNQVFSFAEHGLL 148 +G + FSF E G + Sbjct: 216 LGDRRYFSFREEGFI 230 >UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepID=Y2926_ENTFA Length = 232 Score = 158 bits (400), Expect = 6e-38, Method: Composition-based stats. Identities = 46/147 (31%), Positives = 85/147 (57%), Gaps = 4/147 (2%) Query: 6 RSLIQRALKTLDRHLHEPGV----AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLI 61 +++ RA L +++ TS++ + L+ M GL++E +YLN +N +I Sbjct: 83 KAIELRAAIELGCRIYQSSQIKFGKVTSSQQVAQRLLQEMKGLQQEHLICIYLNTKNDII 142 Query: 62 AGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQAL 121 +T+F G++N++ HPRE+ + A+ +++A ++LAHNHPSG TPS D T+R+ + Sbjct: 143 QQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDIQFTKRMEECG 202 Query: 122 GLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++ I++ DH+I+G + S E Sbjct: 203 EMMGIQLLDHIILGDSGYISLREENFF 229 >UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus RepID=C7RDS9_ANAPD Length = 228 Score = 157 bits (399), Expect = 7e-38, Method: Composition-based stats. Identities = 48/138 (34%), Positives = 84/138 (60%) Query: 9 IQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFT 68 +Q + +R L + TS++ + + ++ L++E F + L+++N +IA E + Sbjct: 89 LQLGKRINERVLDKKIEKITSSKDVYDIMSPRLSNLKKEYFYAILLDSKNVIIAKEVISI 148 Query: 69 GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRV 128 G + T V+PREV K A+ +A +++L HNHPSG PS D LIT+RL +A ++DI+V Sbjct: 149 GDLGSTVVNPREVFKPAIKKSAKSMILVHNHPSGNPKPSTEDFLITDRLAEAGDILDIKV 208 Query: 129 PDHLIVGGNQVFSFAEHG 146 DH+++G + +SF + G Sbjct: 209 LDHIVIGNSSYYSFKKEG 226 >UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Haemophilus ducreyi RepID=Q7VMM9_HAEDU Length = 157 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 60/155 (38%), Positives = 95/155 (61%), Gaps = 7/155 (4%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGV-------AFTSTRAAREWLILNMAGLEREEFRVLY 53 ++ + ++ +A + L E G+ +F + A E+ + + ERE F VL+ Sbjct: 3 LSTQHQDMLNQAKALYENVLRETGIRSYASNPSFGDEKEASEYCQMQLGFEEREVFGVLF 62 Query: 54 LNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLI 113 + QN+LI E LF GTIN+ +HPRE++K+AL N++AV+L HNHPSG+VTPS++D+ Sbjct: 63 WDTQNRLIRFEKLFFGTINQASIHPREIVKKALELNSSAVILTHNHPSGQVTPSQSDKQT 122 Query: 114 TERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 T ++ QA L+D+ V DH+IV +SF H L+ Sbjct: 123 TAKIKQACQLIDVNVLDHIIVSATDTYSFCMHQLM 157 >UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus jensenii RepID=C2E2B4_9LACO Length = 207 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 49/136 (36%), Positives = 83/136 (61%) Query: 13 LKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTIN 72 LK L + F S+ ++LI G+E+E+ V+YL+N+N+++ LF GT+N Sbjct: 72 LKRLKAVRTRKLIQFVSSHEVGKYLIDRFLGVEQEQLVVIYLDNKNKVLGERLLFQGTVN 131 Query: 73 RTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHL 132 R+ VHPR++ + A+++N+ +++AHNHPSG+ PS+ D T+++ +A L+ I DH+ Sbjct: 132 RSVVHPRDIFRWAVFYNSVGILIAHNHPSGDANPSQKDIEFTKQINKASDLMGINFLDHI 191 Query: 133 IVGGNQVFSFAEHGLL 148 IV SF E L+ Sbjct: 192 IVADRSYLSFKEEQLI 207 >UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacteria RepID=Q0BRK0_GRABC Length = 271 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 81/134 (60%) Query: 15 TLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRT 74 L R + +L ++A + E+FRVL+L+N+NQLIA E L GT+N Sbjct: 138 RLLRADAVAQPVLNNWERLIAYLNASLAREKNEQFRVLFLDNRNQLIADEILAHGTVNHA 197 Query: 75 EVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIV 134 V+PREV+KRAL +A A+++ HNHPSG+ TPS D +T L +A L+ + + DH+I+ Sbjct: 198 PVYPREVVKRALELHATALIVVHNHPSGDPTPSAEDIRMTRELREAGRLLSLDLHDHVII 257 Query: 135 GGNQVFSFAEHGLL 148 G + SF + GLL Sbjct: 258 GRHGWSSFRKQGLL 271 >UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SK46_9CAUL Length = 244 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 55/151 (36%), Positives = 88/151 (58%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 MTP +Q + R + EP +S +A +L + +A RE+FR+L+L+ + Sbjct: 94 MTPDIALDLQLMFEATRRLMAEPLKRSTVISSWQALLSYLRVTLAHEPREQFRLLFLDKK 153 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 NQLIA E + GT++ +PRE+++RAL +A++V+L HNHPSG+ PS+ D +T+ Sbjct: 154 NQLIADEIMNYGTVDHAPAYPREIMRRALELSASSVILVHNHPSGDPMPSQGDIDMTKAN 213 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + A + I + DHLIVG V S + G + Sbjct: 214 IAAGKPLKIAIHDHLIVGREGVLSMKQVGAI 244 >UniRef50_B9ECC3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9ECC3_MACCJ Length = 150 Score = 156 bits (396), Expect = 1e-37, Method: Composition-based stats. Identities = 47/138 (34%), Positives = 77/138 (55%) Query: 11 RALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGT 70 + +K R + + S ++ + RE+F ++ LN +N++ T+F GT Sbjct: 13 KDVKQYYRKTRDERIKVKSPDNVADFCKKLIGNSVREKFLLVGLNTKNEITFVYTVFIGT 72 Query: 71 INRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPD 130 IN + +HPREV + A+ ++ A+++LAH HPS + TPS DR T+R + L+ I V D Sbjct: 73 INMSPIHPREVFQVAILNSCASIILAHCHPSDDPTPSSEDREATKRFEECGELLGIPVLD 132 Query: 131 HLIVGGNQVFSFAEHGLL 148 H+IV + FSF E+ L Sbjct: 133 HIIVTESSYFSFRENNLF 150 >UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobacteria RepID=Y1607_AGRT5 Length = 280 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 48/144 (33%), Positives = 82/144 (56%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 + L+ + + + S + ++ MA RE+FR+L+L+ +N LIA E Sbjct: 137 DLKLVASVSQRMLKSEIRNKQVLGSWSSVIDYCHAAMAHETREQFRILFLDKRNVLIADE 196 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 GT++ T V+PRE+++RAL ++ A++L HNHPSG+ TPS+AD +T+ ++ + Sbjct: 197 VQGQGTVDHTPVYPREIVRRALELSSTALILIHNHPSGDPTPSRADIEMTKTIIDTAKPL 256 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 I V DH+I+G + SF L+ Sbjct: 257 GITVHDHIIIGKDGHASFKGLRLI 280 >UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=A1K759_AZOSB Length = 196 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 60/145 (41%), Positives = 84/145 (57%), Gaps = 3/145 (2%) Query: 7 SLIQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAG 63 + A++ L R E S R++L G E F VLYL+ QN+LI Sbjct: 52 DALACAIEILHRSFAEQLSARNVLDSPGVVRQFLRTFFEGKPYEIFVVLYLDAQNRLIRA 111 Query: 64 ETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGL 123 E F GT+ +T V+PRE+++R+L +AA V+ +H HPSG PS AD ++T L AL L Sbjct: 112 EEAFRGTLTQTSVYPREILRRSLELHAAGVIFSHQHPSGVCEPSSADEVLTNMLKSALTL 171 Query: 124 VDIRVPDHLIVGGNQVFSFAEHGLL 148 VD+RV DH++V G++ SFAE G L Sbjct: 172 VDVRVLDHIVVAGDRAVSFAETGRL 196 >UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae RepID=C4LDH2_TOLAT Length = 165 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 64/144 (44%), Positives = 91/144 (63%), Gaps = 1/144 (0%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E+ ++ A + L ++ G + +A +L M E E F L+L+NQ+++I E Sbjct: 23 EKDILIMA-RRLAKNRLAKGCSIERPSSAFIYLQALMGNYENEVFGSLFLDNQHRIICFE 81 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GT+N T +HPREV+KRAL NAAAV+ HNHPSGE PS+AD+ IT +L + L L+ Sbjct: 82 ELFRGTLNVTNIHPREVVKRALAVNAAAVIFVHNHPSGEPEPSEADKKITVQLRETLNLI 141 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 D+RV DH++VG S AE GL+ Sbjct: 142 DVRVLDHIVVGAKACISMAERGLV 165 >UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonella RepID=A1UT15_BARBK Length = 265 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 52/144 (36%), Positives = 79/144 (54%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 + +I R F+S + MA RE+FR+L+L+ ++ L++ E Sbjct: 122 DLKIISAVAGRFARAQLSKRDIFSSWDKVLAYCKAVMAHETREQFRILFLDKKHGLLSDE 181 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 TGTI+RT V+PREV+ RAL +A+ ++L HNHPSG+ +PS+ D +T RL + Sbjct: 182 VQQTGTIDRTPVYPREVVSRALELSASGIILVHNHPSGDASPSQEDISMTYRLKDVANAL 241 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 DI + DHLI+ N SF L+ Sbjct: 242 DITLHDHLIIARNDYISFKALKLI 265 >UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria RepID=Y767_ROSS1 Length = 233 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 45/150 (30%), Positives = 87/150 (58%), Gaps = 3/150 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVA---FTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 M + + ++ AL+ R L G S A + + + M+ L++E+ R + L+ + Sbjct: 79 MGEAKTAQLKAALEIGRRLLLAGGDERFLIRSPTDAAQLMQIEMSHLDQEQLRAICLDTK 138 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N++ +T++ G+++ + V E+ K + N+A++++ HNHPSG+ TPS D ++T ++ Sbjct: 139 NRVQKIQTVYIGSLHTSMVRIGEIFKEPIRLNSASIIVVHNHPSGDPTPSPEDVVVTRQI 198 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGL 147 ++A L+DI V DHL++G + S E GL Sbjct: 199 IEAGRLLDIDVLDHLVIGAGRFVSMRERGL 228 >UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular organisms RepID=Y2289_ALKMQ Length = 232 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 47/122 (38%), Positives = 75/122 (61%) Query: 27 FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 S L+ M L++E F + LN ++++IA E + G++N + VHPREV A+ Sbjct: 111 IKSPDDVSNLLMEEMRYLKKEYFNIALLNTKHEVIAIENISIGSLNASIVHPREVFVVAI 170 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 +++A++L HNHPSG+ +PS D IT+RLV+A L+ I V DH+I+G N +S E Sbjct: 171 KRSSSAIILVHNHPSGDPSPSGEDIRITKRLVEAGKLLGIEVLDHIIIGDNVYYSLKEKS 230 Query: 147 LL 148 ++ Sbjct: 231 MM 232 >UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MFA0_RHOM4 Length = 245 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + + A + R + + + + L+RE F+++ LN Sbjct: 94 VGPAKAVQLVAAFEIGRRVEAQRPGRRIQVRTPADVAACYGPLLRDLKREVFKIVLLNTA 153 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N +IA T+ G + + V PR V +RA+ NAA ++ HNHPSG PS D IT +L Sbjct: 154 NYIIADYTISEGGLAASIVEPRAVFQRAILDNAAGIICLHNHPSGNPEPSAEDIRITRQL 213 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 V+A L+ I V DH+I+ G S AE GL+ Sbjct: 214 VEAGRLLGIPVHDHIIIAGTTYTSLAERGLM 244 >UniRef50_C9NPT2 DNA repair protein RadC n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPT2_9VIBR Length = 224 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 1/144 (0%) Query: 5 ERSLIQRALKTLDRHLHEPGV-AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAG 63 +++++Q A + R+ + + + ++A ++RE F L+L+N + + Sbjct: 80 DQAVLQEAKDIIARYWAARSPNVLNAPNLVKMYCQCHLAHVDREVFGALWLDNGLRALGT 139 Query: 64 ETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGL 123 LF G++N VH REV++ L NAAAV+ HNHPSG+ +PS+ADR +T L LG Sbjct: 140 VDLFAGSLNHAAVHTREVLRSGLRLNAAAVIFYHNHPSGDPSPSQADRQLTNHLKDVLGQ 199 Query: 124 VDIRVPDHLIVGGNQVFSFAEHGL 147 ++IRV DH++V + V SFAE G Sbjct: 200 IEIRVLDHMVVSLSGVVSFAERGW 223 >UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae RepID=Y1235_THEP1 Length = 222 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 78/135 (57%), Gaps = 1/135 (0%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 K L R L S+ + M LERE +V+ L+ + +I TL GT +R Sbjct: 89 KRLHRELERIPEKLDSSVKVYRYCQ-EMVYLEREIVKVICLDTKLNVIGENTLTVGTSDR 147 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 + +HPR+V + A+ NA+ V++ HNHPSG+ TPSK DRLITERL QA ++ + + DH+I Sbjct: 148 SLIHPRDVFRTAIRANASGVIVVHNHPSGDPTPSKEDRLITERLKQAGEILGVSLVDHVI 207 Query: 134 VGGNQVFSFAEHGLL 148 V FSF E G L Sbjct: 208 VSRRGYFSFREEGEL 222 >UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J365_DESRM Length = 231 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 51/151 (33%), Positives = 81/151 (53%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRAL---KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + + A K L + L++E F L LN + Sbjct: 81 IGPSMAARLMAAFALTKKLASAGASENTVIRCPEDIFYLMKNEAKLLDKEYFSALLLNTK 140 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N +I ET+ GT+N + VHPRE+ K+A+ +AAAV+L HNHPSG+ TPS+ D +T+RL Sbjct: 141 NHVIGKETISIGTLNSSMVHPRELFKQAIRRSAAAVILVHNHPSGDPTPSREDISLTKRL 200 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++A ++ I V DH+++G ++ S GL+ Sbjct: 201 IEAGEIIGIDVLDHIVLGFDKFTSLKSKGLI 231 >UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5ZRS6_9FIRM Length = 236 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 48/135 (35%), Positives = 74/135 (54%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 K + + F S + + + + E+E + L+NQN L+ L GT+N Sbjct: 97 KRIASTAARISLDFNSPDSIAAYYMEQLRHQEQEIMICMMLDNQNHLLGDTMLSKGTVNA 156 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 T + PREV AL ++A ++L HNHP G PSK D+ ITER+ QA ++ I + DH+I Sbjct: 157 TLITPREVYLEALRYHAVNLILIHNHPGGNPAPSKCDKEITERICQAGEMLGINLLDHII 216 Query: 134 VGGNQVFSFAEHGLL 148 +G ++ SF E GL+ Sbjct: 217 IGDHRYISFREEGLM 231 >UniRef50_C5D8D2 DNA repair protein RadC n=4 Tax=Firmicutes RepID=C5D8D2_GEOSW Length = 169 Score = 155 bits (392), Expect = 4e-37, Method: Composition-based stats. Identities = 51/146 (34%), Positives = 79/146 (54%) Query: 3 PGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIA 62 P +R I + + S A + L + +RE+F V+ L+ +NQ A Sbjct: 24 PAKRVNIVSLKLVRESSVLYRERQIKSPEDAYKLLKPFLVEADREKFVVVCLDTKNQPTA 83 Query: 63 GETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALG 122 G++N + VHPREV K A+ N+A++++AHNHPS + TPS+ D +T+RLV+A Sbjct: 84 INICHIGSLNSSIVHPREVFKSAILSNSASIIVAHNHPSSDPTPSREDIEVTKRLVEAGR 143 Query: 123 LVDIRVPDHLIVGGNQVFSFAEHGLL 148 +V I + DHLIV + S E G + Sbjct: 144 IVGIELLDHLIVCEEKFVSLKEKGYI 169 >UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9I2_9FIRM Length = 224 Score = 155 bits (392), Expect = 4e-37, Method: Composition-based stats. Identities = 58/150 (38%), Positives = 86/150 (57%), Gaps = 2/150 (1%) Query: 1 MTPGERSLIQRALKTLDRHL--HEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 MT + +I +L+ R E T + L +M+ L+ E F+V+ LN +N Sbjct: 75 MTDLKCDMILASLEIGRRAYLKKEKQKIITCVMDIVDLLSYDMSFLDEEHFKVILLNTKN 134 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 +I E + GTIN + VH REV + A+ NA +++LAHNHPSG+ TPS D +T+RL Sbjct: 135 MVIETELISIGTINTSLVHVREVFRNAIKKNANSIILAHNHPSGDSTPSIEDEHLTKRLK 194 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A L+ I+V DH+I+G + FSF E +L Sbjct: 195 DAGELIGIKVIDHVIIGKDNYFSFMEENML 224 >UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales RepID=Q2G8R8_NOVAD Length = 245 Score = 155 bits (392), Expect = 5e-37, Method: Composition-based stats. Identities = 50/147 (34%), Positives = 87/147 (59%) Query: 2 TPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLI 61 + ++ A + L R + ++ +A ++L ++MA L E RVLYLN+QN LI Sbjct: 99 SAAALRIVALAARRLARTVVREQPILSNWQALLDYLHIDMAHLTVERVRVLYLNSQNMLI 158 Query: 62 AGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQAL 121 + GT++ + ++ REVI++A+ AAA++L HNHPSG PS+AD +T+++++A Sbjct: 159 LDHLVSEGTLDESPIYTREVIRKAMDVGAAAMILVHNHPSGSPKPSRADIQVTQKVMEAA 218 Query: 122 GLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L+ + V DH+++G S GL+ Sbjct: 219 RLMGMTVHDHIVIGREGHTSLKAQGLI 245 >UniRef50_C6E4Z0 DNA repair protein RadC n=3 Tax=Geobacter RepID=C6E4Z0_GEOSM Length = 167 Score = 155 bits (392), Expect = 5e-37, Method: Composition-based stats. Identities = 51/125 (40%), Positives = 78/125 (62%), Gaps = 2/125 (1%) Query: 22 EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREV 81 +P +TS + + +E F L+L+ +N+++ + + TG++N++ VHPRE+ Sbjct: 43 KPNTRYTSASQVFDTFTF-LRHETKEHFIALHLDGKNRIVCIDMVSTGSLNQSIVHPREL 101 Query: 82 IKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFS 141 K AL +AAAV+L HNHP+G+ TPS D IT RL +A L+ IRV DH+I+G N +S Sbjct: 102 FKTALLSSAAAVILLHNHPTGDPTPSTEDLTITRRLQEAGELIGIRVLDHIIIGDN-YYS 160 Query: 142 FAEHG 146 F E G Sbjct: 161 FTERG 165 >UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium RepID=Y547_CLOBA Length = 229 Score = 155 bits (392), Expect = 5e-37, Method: Composition-based stats. Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 5/142 (3%) Query: 12 ALKTLDRHLH-----EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 AL L R + + S + M+ L++E +V++LN +N +I + + Sbjct: 88 ALAELFRRFRTFKSADRDIKIMSPNDIAMLINGEMSLLKQEILKVIFLNTKNIVIGTKDV 147 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 F G++N + VHPRE+ K A+ ++ +++ HNHPSG+ TPSK D IT R+ + ++ I Sbjct: 148 FKGSLNTSIVHPREIFKEAVNKSSTKIIICHNHPSGDPTPSKEDINITLRIKECGEIMGI 207 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 ++ DH+I+G N S E G + Sbjct: 208 QLLDHIIIGKNGFISLKEKGFI 229 >UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales RepID=A9KL05_CLOPH Length = 232 Score = 154 bits (391), Expect = 6e-37, Method: Composition-based stats. Identities = 43/134 (32%), Positives = 80/134 (59%) Query: 15 TLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRT 74 + + G+ +T + E+ + +M L+ E+ R+L + +++L+ E + GT+N + Sbjct: 98 RMAKATFADGIRYTDPSSVAEYYMQDMRSLKTEQSRLLMFDTKSKLLREEIISIGTVNAS 157 Query: 75 EVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIV 134 + PREV A+ + A ++L HNHPSG+ TPSK D +T+R+ +A L+ + + DH+I+ Sbjct: 158 IMSPREVFLLAVKYEAVYIILLHNHPSGDPTPSKEDIAVTKRMKEAGELLGVTLMDHIII 217 Query: 135 GGNQVFSFAEHGLL 148 G N+ S E G++ Sbjct: 218 GDNRYISLKEQGII 231 >UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSS5_SYNAS Length = 308 Score = 154 bits (391), Expect = 6e-37, Method: Composition-based stats. Identities = 58/137 (42%), Positives = 86/137 (62%), Gaps = 2/137 (1%) Query: 12 ALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTI 71 AL ++ +P + T ++ + GL+ E F VLYL+ QN++IA ET+ G + Sbjct: 172 ALYLQEKAREKP--QISCTGELLDFCKTALGGLKDENFCVLYLDTQNRIIAFETIQKGIV 229 Query: 72 NRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDH 131 N+ V+PR+VI+RAL H ++A++L HNHPSG V PS AD +T + L+DI V DH Sbjct: 230 NQAVVYPRQVIERALSHKSSALILVHNHPSGFVKPSDADIRLTRTITDTAKLLDIMVHDH 289 Query: 132 LIVGGNQVFSFAEHGLL 148 LI+G N+ FSF E G++ Sbjct: 290 LIIGENRFFSFREEGIM 306 >UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9S4_9DELT Length = 227 Score = 154 bits (391), Expect = 7e-37, Method: Composition-based stats. Identities = 47/142 (33%), Positives = 76/142 (53%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 +L Q + G + + + EEF +++++N++IA E + Sbjct: 86 ALTQELFARMGEARTRSGAPLSDPAEVARAAMARIGSKGVEEFWAAFMDSKNRVIAWEQV 145 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 GT++ T V PRE++ AL AAA++LAHNHP G+ TPS+ D +T R+ + I Sbjct: 146 SKGTVDATPVFPREIMVTALRLEAAALILAHNHPGGDPTPSREDLDLTRRIRDTAQGLGI 205 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 R+ DH+IV ++ +SF EHG L Sbjct: 206 RILDHIIVTDHEYYSFNEHGRL 227 >UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC32AB Length = 227 Score = 154 bits (390), Expect = 9e-37, Method: Composition-based stats. Identities = 47/134 (35%), Positives = 76/134 (56%) Query: 15 TLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRT 74 + + F +++ A ++ + + LE E F VL LN + +LI + L GT+N T Sbjct: 94 RISKATMAKRTVFNTSKDAADYCMEELRHLEYECFMVLLLNTKCELINEKILSMGTVNYT 153 Query: 75 EVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIV 134 + REV + AL A +++ HNHPSG+ TPS+ D L T++L +A LV I + DH+I+ Sbjct: 154 CITSREVYRYALSKGAVYIIVVHNHPSGDPTPSREDSLCTKKLKEAGELVGIPLIDHIII 213 Query: 135 GGNQVFSFAEHGLL 148 G N+ S E ++ Sbjct: 214 GDNRYISLKEQDMI 227 >UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YL92_THEYD Length = 222 Score = 154 bits (390), Expect = 9e-37, Method: Composition-based stats. Identities = 49/148 (33%), Positives = 79/148 (53%), Gaps = 1/148 (0%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 + + I A++ R L + G+ + + + + ++E F L L+ + L Sbjct: 73 VGLAKACQIMAAIEFSKRFLLKEGIKIKNVDDVLK-ITEELKDKKQEYFLSLTLDGASNL 131 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 I T+F GT+N + VHPRE+ A+ AA ++ HNHPSG+ PSK D IT+RLV+ Sbjct: 132 IQKRTVFIGTLNHSIVHPREIFADAISDRAAGIIFVHNHPSGDSEPSKQDIEITKRLVEI 191 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++ I V DH+I+ N +SF G+L Sbjct: 192 GKMLGIEVIDHIIISKNGYYSFQAEGML 219 >UniRef50_A1B298 DNA repair protein RadC n=7 Tax=Bacteria RepID=A1B298_PARDP Length = 162 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 89/148 (60%), Gaps = 2/148 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 + E++++ A + L RHL++ V TS +A ++ L + G + E F VLYL+ +N+L Sbjct: 17 FSAQEQAVVYEARQILLRHLNQNPV-LTSWQAVLDYCALTIRG-DVERFHVLYLDRRNRL 74 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 I+ E L GT++ V+PREV++R L NA+A+++ HNHP+G+ PS AD +T+ + A Sbjct: 75 ISDECLAIGTVDHVPVYPREVLRRCLALNASALIIVHNHPAGDPEPSAADFAMTKEIRNA 134 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + + + DH+I G + S G L Sbjct: 135 SASLGVILHDHIITGAGRETSLRARGEL 162 >UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0FF1E Length = 213 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 56/127 (44%), Positives = 81/127 (63%) Query: 22 EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREV 81 E + S ++ + I + +E F V LNNQ++ + + LF+GTIN V+PRE+ Sbjct: 86 ERMMKLDSVDESKAFFISQLQYYPQERFAVALLNNQHEFLHYKELFSGTINAASVYPREI 145 Query: 82 IKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFS 141 +K AL +NAA V+LAHNHPSG PS+AD IT+R+ QAL L+D++V DH++VG S Sbjct: 146 VKYALDYNAANVILAHNHPSGTPEPSQADIAITQRIRQALDLIDVQVLDHIVVGAGNAVS 205 Query: 142 FAEHGLL 148 A+ G L Sbjct: 206 LAQRGCL 212 >UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Escherichia RepID=Q8VR59_ECOLX Length = 260 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 100/103 (97%), Positives = 102/103 (99%) Query: 46 REEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT 105 R EFRVLYLNNQN+LIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT Sbjct: 158 RMEFRVLYLNNQNKLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT 217 Query: 106 PSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 PSKADRLITERLVQALGLVDIRVPDHLIVGG+QVFSFAEHGLL Sbjct: 218 PSKADRLITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 260 >UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes RepID=Y1642_SYNWW Length = 235 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 77/133 (57%), Gaps = 3/133 (2%) Query: 16 LDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTE 75 L R + P A RE + M +RE FRVLYL+ + LI + + G ++ + Sbjct: 106 LRRIIKSPEDV---QEAVRELAMEEMRHYDREHFRVLYLDRKGGLITMQDISIGGLHSSI 162 Query: 76 VHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVG 135 VHPREV K A+ +AA+++L HNHPSG+ TPS+ D IT RL++A ++ I + DH+I+G Sbjct: 163 VHPREVFKTAVKKSAASMILVHNHPSGDPTPSQEDIEITRRLIEAGKIMGIEILDHVIIG 222 Query: 136 GNQVFSFAEHGLL 148 S GL+ Sbjct: 223 EINYCSLKARGLI 235 >UniRef50_Q3AF80 UPF0758 protein CHY_0341 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Y341_CARHZ Length = 226 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 43/127 (33%), Positives = 69/127 (54%) Query: 22 EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREV 81 E + F + +L + ++E+ VLYLN +NQL + G +N V P ++ Sbjct: 100 ENKLNFLNPDDVYNYLRYKIGHKKQEQVVVLYLNTKNQLCGENIVAIGGVNHAGVSPGDI 159 Query: 82 IKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFS 141 + A+ A AV++AHNHPSG+ TPSK D T R+ +A ++ I++ DH+I+G N+ S Sbjct: 160 FREAVKIGAYAVIIAHNHPSGDPTPSKEDIDFTGRVKKASEILGIKLLDHIILGENKYIS 219 Query: 142 FAEHGLL 148 L Sbjct: 220 MKAERLF 226 >UniRef50_Q4QPE3 Putative DNA repair radC-like protein n=5 Tax=Haemophilus influenzae RepID=Q4QPE3_HAEI8 Length = 156 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 54/153 (35%), Positives = 93/153 (60%), Gaps = 5/153 (3%) Query: 1 MTPGERSLIQRALKTLDRHLHEP-----GVAFTSTRAAREWLILNMAGLEREEFRVLYLN 55 + +++++++A L + + E FT A+ + + ERE F VL+L+ Sbjct: 4 LNEQQQAILEQAQVILTKVMEEKPFYQGAQEFTEPSIAKLYFQTIIGNEERENFVVLFLD 63 Query: 56 NQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITE 115 ++LI E +F G+++ T V RE+I++AL NA+A+++ HNHP+G V PS AD+ IT+ Sbjct: 64 RIHRLIKSEVMFQGSVSETSVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADKYITK 123 Query: 116 RLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 RL +A L+DI++ DH IV G+ F F ++ L+ Sbjct: 124 RLKEACELMDIKLLDHFIVSGSASFCFTDNHLI 156 >UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrionales RepID=C4XRP2_DESMR Length = 228 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 48/135 (35%), Positives = 75/135 (55%), Gaps = 1/135 (0%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 + ++ + + V S E + E EEF + ++ +N+L+ E + GT+++ Sbjct: 95 RFHEQPMRDRAV-LGSPDVVAEMARARIGVKEHEEFWMALVDTKNRLVGWERVSKGTVDQ 153 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 V+PREVI AL +NA+ V+L HNHP + PS D T R+V A +DIRV DHL+ Sbjct: 154 AAVYPREVIAMALRYNASGVILVHNHPGADPKPSAEDMAFTRRIVAAAREMDIRVLDHLV 213 Query: 134 VGGNQVFSFAEHGLL 148 V N+ FSF G++ Sbjct: 214 VTENRFFSFQAEGMI 228 >UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepID=Y3149_BORPD Length = 225 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 60/142 (42%), Positives = 85/142 (59%), Gaps = 1/142 (0%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 ++++ A + + L A + + + + +A E LYL++Q LI L Sbjct: 85 AILELARRAAEERLMRQ-QAMSEPGSVKRYFKTALANCAVEHCLALYLDSQLNLITSGEL 143 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 GT+ R V+PREV++ AL H+AAA++LAHNHPSG PS+ADR T + QAL LV+I Sbjct: 144 ARGTLARASVYPREVVREALRHHAAALILAHNHPSGSAQPSQADRDFTRHMQQALALVEI 203 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 R+ DHLIV G+ V S AE GLL Sbjct: 204 RLLDHLIVAGDTVVSMAELGLL 225 >UniRef50_Q2S042 UPF0758 protein SRU_2338 n=1 Tax=Salinibacter ruber DSM 13855 RepID=Y2338_SALRD Length = 233 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 4/152 (2%) Query: 1 MTPGERSLIQRALKTLDR----HLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNN 56 + P + + + A + R + + T + + L++E F+V++LN Sbjct: 81 VGPAKATKLAAAFEAGRRVESQRQQDERMQVTCPADVADVYGPLLRDLDKEVFKVVHLNT 140 Query: 57 QNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITER 116 N +I T+ G ++ + V PR V ++A+ +AAAV+ HNHPSG PS+ D IT + Sbjct: 141 ANVIIGDYTVSEGGLSSSVVEPRGVFEQAILDDAAAVICLHNHPSGNPEPSREDIRITRQ 200 Query: 117 LVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L +A G + I V DHLI+ G + S AE G++ Sbjct: 201 LAEAGGTMGIPVHDHLIIAGTKHTSLAERGVI 232 >UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q1WT78_LACS1 Length = 225 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 51/149 (34%), Positives = 83/149 (55%), Gaps = 6/149 (4%) Query: 5 ERSLIQRALKTLDRHLHEP-----GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQ 59 E+ I RAL+ E G F+S ++I + ++E + L+ +NQ Sbjct: 76 EKVAIIRALREFSERYKEKEGLVLGQIFSSC-MFGNYMIDKIGDSKQELLVCVCLDTKNQ 134 Query: 60 LIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQ 119 +++ + +F GT+N VHPRE+ K AL + A +++AHNHPSG V PS+ D +T+RL+ Sbjct: 135 VLSEKVIFKGTLNSATVHPREIFKHALNFSCARILVAHNHPSGNVEPSENDIQLTKRLIN 194 Query: 120 ALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A ++ I + DH+IVG S AE ++ Sbjct: 195 AGKMIGIELIDHVIVGSEVYLSLAEEKIV 223 >UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BYC2_DESAD Length = 225 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 47/124 (37%), Positives = 73/124 (58%) Query: 25 VAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKR 84 A +S + + + L +EEF + +NN+N++I E L GT+++T V+PREV+ Sbjct: 102 EAISSPDVVYKAAMARIGNLSKEEFWIALVNNRNKVICWERLSEGTVDKTAVYPREVVAL 161 Query: 85 ALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAE 144 AL HNA+ V+L HNHP G+ +PS D T + ++IR+ DH+IV ++ SF E Sbjct: 162 ALRHNASGVILTHNHPGGDPSPSPEDTERTMEIAALCQDMEIRLLDHVIVTADRFHSFKE 221 Query: 145 HGLL 148 G L Sbjct: 222 AGYL 225 >UniRef50_A7HJG0 DNA repair protein RadC n=3 Tax=Thermotogaceae RepID=A7HJG0_FERNB Length = 225 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 44/149 (29%), Positives = 82/149 (55%), Gaps = 6/149 (4%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGV----AFTSTRAAREWLILNMAGLEREEFRVLYLNN 56 + + + AL+ R + E V TS ++ I +M +E RV++L+ Sbjct: 70 LGDVKIVTLMAALELAKRLVKEETVILDPKLTSPENVFQYCI-DMQSYPQEIVRVIFLDT 128 Query: 57 QNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITER 116 + ++I + + GTIN + HPR++ + A+ ++ ++LAHNHPSG+ TPSK D +T++ Sbjct: 129 KLKVIGSKDVSKGTINSSMAHPRDIFREAILRSSTGIILAHNHPSGDPTPSKDDIELTKK 188 Query: 117 LVQALGLVDIRVPDHLIVGGNQVFSFAEH 145 + +A L+ I + DH+I+G +S + Sbjct: 189 IKKAGELLGINLHDHVIIG-QTFYSLRQK 216 >UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q042N7_LACGA Length = 206 Score = 152 bits (386), Expect = 2e-36, Method: Composition-based stats. Identities = 47/141 (33%), Positives = 81/141 (57%) Query: 8 LIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLF 67 ++Q L+ + ++ + S+ ++ + G +EE +YL+++N++IA + +F Sbjct: 66 VLQLMLERVKGVNNKEIESLYSSSQVGCYIADKLCGRPQEELYGIYLDSKNKIIAEKLIF 125 Query: 68 TGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIR 127 GT+NR HPR++ + A+ +N+ A +AHNHPSG+ PS+ D T++LV+A + I Sbjct: 126 QGTVNRAVAHPRDIFRWAVIYNSTAFFVAHNHPSGDEQPSQHDLRFTKKLVEASKCMGID 185 Query: 128 VPDHLIVGGNQVFSFAEHGLL 148 DH IV N SF E LL Sbjct: 186 FLDHFIVTDNTYLSFREMELL 206 >UniRef50_A9IEU5 Putative DNA repair protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IEU5_BORPD Length = 174 Score = 152 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 89/148 (60%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 M P +R+ I + L G ++ A+ +L L +AGLE E ++ L+ Q +L Sbjct: 27 MRPAQRAEILAVARELVSIDTLHGEDLSNPDKAKAFLQLRLAGLEHEVCALMLLDVQLRL 86 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 I F GT+++ V+PRE++K AL HNAA +++AHNHPSG S+ADR +T+ + QA Sbjct: 87 ITYLEPFRGTLSQAPVYPREILKLALRHNAAGLMMAHNHPSGLAEASQADRQLTQAVQQA 146 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L L+D+R+ DH IV G V S A+ G L Sbjct: 147 LALIDVRLLDHFIVAGTTVVSMAQRGQL 174 >UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Y852_LACSS Length = 224 Score = 152 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 51/147 (34%), Positives = 84/147 (57%), Gaps = 4/147 (2%) Query: 6 RSLIQRALKTLDRHLHEPGV----AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLI 61 +++ +A+ L R + S++ + +I ++AG +E+ +YL+ +NQ+I Sbjct: 76 KAIELQAICELSRRIQNQRTLRFGVVASSQMVGQRMIESLAGETQEQLLAVYLDVKNQII 135 Query: 62 AGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQAL 121 + L+ GT+N + HPREV K A+ ++AA +L HNHPSG++ PS D T+R+V Sbjct: 136 QIKQLYLGTLNSSVAHPREVFKWAVQYSAAKFILVHNHPSGQLAPSTQDINFTKRIVNCG 195 Query: 122 GLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L+ I DHLI+G +Q S E G L Sbjct: 196 QLMGITCLDHLIIGSSQYLSLREEGYL 222 >UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobacteria RepID=Y1917_THICR Length = 225 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 60/152 (39%), Positives = 89/152 (58%), Gaps = 4/152 (2%) Query: 1 MTPGERSLIQRALKTLDRHLH---EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + ++ L+ RH + G A T L ++ RE F ++ L+ Q Sbjct: 74 LGQAKYVQLKAVLEMSRRHFESGLKKGEALTQPEKVARLLQHHIGHQSREIFGLVLLDQQ 133 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 NQ I LFTGTIN+ VH REV+K L H+AAAV+LAHNHPSG+ TPS++DR +T ++ Sbjct: 134 NQFIQFVPLFTGTINQATVHIREVLKTVLDHHAAAVILAHNHPSGDPTPSQSDRDLTHQI 193 Query: 118 VQALGLVDIRVPDHLIVGG-NQVFSFAEHGLL 148 Q L L++ R DH+I+G + +SF + G+L Sbjct: 194 QQGLQLIETRCLDHIILGDHGRWYSFTQQGIL 225 >UniRef50_C9LLN8 DNA repair protein RadC n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLN8_9FIRM Length = 227 Score = 152 bits (384), Expect = 5e-36, Method: Composition-based stats. Identities = 42/149 (28%), Positives = 77/149 (51%), Gaps = 5/149 (3%) Query: 5 ERSLIQRALKTLDRHL-----HEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQ 59 ++++ A L R L + F+ A + + + ++E F V +LN +N+ Sbjct: 79 DKAITVCAAVELGRRLAQFHNKKQLENFSFPEAVASYFMEKLRHEDQEHFIVCFLNTKNR 138 Query: 60 LIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQ 119 L+ + + G+++ V +E ++ AL A ++L HNHPSG PS AD +T + + Sbjct: 139 LLGYKEICVGSLDAAPVDIKEAMRWALRFKAHGMILVHNHPSGYPEPSDADINLTRQFRR 198 Query: 120 ALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A DIR+ DH+I+G + S ++GL+ Sbjct: 199 ATSFFDIRLLDHVIIGDGEFASLNKNGLV 227 >UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DAY3_MYXXD Length = 241 Score = 151 bits (383), Expect = 5e-36, Method: Composition-based stats. Identities = 46/120 (38%), Positives = 65/120 (54%) Query: 29 STRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYH 88 + + +L + L RE F VL N +N L+ + GT+N V PREV AL Sbjct: 104 TPKEIAAYLAPVLGALRREVFHVLCFNARNVLVHDARVAEGTMNTCPVDPREVFAAALTS 163 Query: 89 NAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A ++VLAHNHPSG+ PS D +T LV L++I+V DH+++G S E GL+ Sbjct: 164 RATSIVLAHNHPSGDPEPSVQDLGLTRHLVAGAQLLNIKVLDHVVMGDGGYVSMLERGLM 223 >UniRef50_C0GE80 DNA repair protein RadC n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GE80_9FIRM Length = 189 Score = 151 bits (383), Expect = 5e-36, Method: Composition-based stats. Identities = 51/151 (33%), Positives = 81/151 (53%), Gaps = 5/151 (3%) Query: 1 MTPGERSLIQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + + +A+ L + L EP + S E +A E E L+LN + Sbjct: 41 LGPRKAKQL-KAVFDLSKALLEPDDTSITIQSPADVFENFKY-LALHEEEYLVALFLNTK 98 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N+++ T+ GT+N + +HPREV A+ A+VV+ HNHPSG+ TPS+ D IT+RL Sbjct: 99 NKILQHTTISKGTLNTSLIHPREVFAPAIRIKCASVVILHNHPSGDPTPSREDIDITKRL 158 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A ++ I + DH+++G S E LL Sbjct: 159 KEAGKIIGIELLDHIVIGNKGFVSLREKSLL 189 >UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7M6_9FIRM Length = 228 Score = 151 bits (383), Expect = 6e-36, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 79/135 (58%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 + + + A WL + G ++E F +YL+ +N ++ LF GT++ Sbjct: 93 RRISEEQTREIDVVANPDALMAWLGREIGGKQQEHFLAIYLDAKNHILEHRLLFKGTLDA 152 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 + VHPREV K AL +A V++ HNHPS ++TPS ADR+IT+RL + L+ I + DHLI Sbjct: 153 SIVHPREVFKEALLASACRVLVVHNHPSQDLTPSLADRIITQRLKETGELIGIELLDHLI 212 Query: 134 VGGNQVFSFAEHGLL 148 VG Q FSF HGLL Sbjct: 213 VGTTQYFSFRAHGLL 227 >UniRef50_C4Z083 DNA repair protein RadC n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z083_EUBE2 Length = 230 Score = 151 bits (382), Expect = 6e-36, Method: Composition-based stats. Identities = 43/140 (30%), Positives = 77/140 (55%) Query: 9 IQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFT 68 I + + + + F++ + + +M LE+E ++ L+N+ +LI + L Sbjct: 90 ILELSRRIAKQKARERLDFSNAETIAGYYMEDMRHLEKEHLVLVMLDNRCRLIRDKVLSV 149 Query: 69 GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRV 128 GT + V RE+ K AL + AA+VVL HNHPSG +PS+ D +T +++A ++ I + Sbjct: 150 GTSTGSMVSVREIFKEALDNRAASVVLLHNHPSGNPSPSREDMKVTRSVMEAGKIIGIEL 209 Query: 129 PDHLIVGGNQVFSFAEHGLL 148 DH+++G N FSF + + Sbjct: 210 LDHIVIGDNSYFSFKQMQYI 229 >UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVJ8_9FIRM Length = 236 Score = 151 bits (382), Expect = 6e-36, Method: Composition-based stats. Identities = 55/152 (36%), Positives = 90/152 (59%), Gaps = 5/152 (3%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGV----AFTSTRAAREWLILNMAGLEREEFRVLYLNN 56 + + ++I AL TL L+ + TS A ++++ +M LE E FR++ LN Sbjct: 85 VGQAKAAMIMAAL-TLAERLNSSSIYDKKKITSPEDAAKYVMASMRDLETEVFRIIILNT 143 Query: 57 QNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITER 116 + ++ + G IN T VHPREV ++A+ A +++L HNHP+G+ +PS+ DR +T R Sbjct: 144 KKEIKYIREISHGIINMTVVHPREVFRQAISDGAHSIILLHNHPTGDPSPSQEDRNLTRR 203 Query: 117 LVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 LV+ +V I + DH+I+G N FSF + G+L Sbjct: 204 LVEVSKIVGIDICDHIIIGDNTFFSFLKEGIL 235 >UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae RepID=C7NDB9_LEPBD Length = 240 Score = 151 bits (382), Expect = 7e-36, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 86/133 (64%) Query: 16 LDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTE 75 L + +H ++ TS +L ++ + E F+VL+LN QN+L+ E LF GTI+R+ Sbjct: 108 LYKKIHNKKISITSNIKLLNYLKCSLLKRDIEVFKVLFLNTQNELMKEEELFYGTIDRST 167 Query: 76 VHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVG 135 ++ RE+IK+ L +NA +V+L HNHP+G + PS +D L+T+++ + ++IR+ DHLI+ Sbjct: 168 IYIRELIKKILEYNAKSVILVHNHPAGSLKPSDSDILLTKKVKEVFESMEIRLLDHLIIS 227 Query: 136 GNQVFSFAEHGLL 148 FSF E G+L Sbjct: 228 EQGYFSFLEGGIL 240 >UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HJN5_GLUDA Length = 221 Score = 151 bits (382), Expect = 8e-36, Method: Composition-based stats. Identities = 55/141 (39%), Positives = 81/141 (57%) Query: 8 LIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLF 67 L++ A L R G + A +L ++A E+FRVL+L+ +LIA E L Sbjct: 81 LLREAAIRLMRARIRQGDLLSCHDALMAYLQASLARDTVEQFRVLFLDRGTRLIADEVLA 140 Query: 68 TGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIR 127 GTI++T V+PREV++RA+ A+ ++L HNHP TPS+ D +T RL Q ++ + Sbjct: 141 QGTIDQTPVYPREVMRRAIQLKASELILVHNHPGWNPTPSREDIAMTRRLAQIATVLGLT 200 Query: 128 VPDHLIVGGNQVFSFAEHGLL 148 V DH+IVG SF + GLL Sbjct: 201 VRDHVIVGNGASISFRQAGLL 221 >UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B8H5_9BACI Length = 228 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 1/135 (0%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 K ++ S A + + ++E F VL L+ ++QLI+ + ++ GTI+ Sbjct: 95 KKINSMFMPEVECLRSPEDAYHAVKY-LTNEDQETFVVLALDTKHQLISRKEIYKGTIDA 153 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 VHPREV + AL +AA +++AH HPSG +PS+ D +T+RL + + I + DH+I Sbjct: 154 AIVHPREVFRFALNKSAAHIIVAHQHPSGNCSPSRDDIEVTKRLRKVGEEIGIPLSDHII 213 Query: 134 VGGNQVFSFAEHGLL 148 VG N+ FS + G L Sbjct: 214 VGRNKYFSMKKQGHL 228 >UniRef50_B7ANR2 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ANR2_9BACE Length = 246 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 42/135 (31%), Positives = 73/135 (54%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 + + + + F + + ++ + ++ E E ++ L+ + +LI E + TGT+N Sbjct: 108 RRISKSCAYRRLDFRNPVSIADYYMEDLRHAECERLVLVMLDTKLRLIKDEIISTGTVNA 167 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 + V PRE+ AL A +V+ HNHPSG+ PS D IT R+ A ++ I + DH+I Sbjct: 168 SIVSPREIFVAALRAGAVFIVMLHNHPSGDAEPSSNDIAITRRVQLAGEMLGISLIDHII 227 Query: 134 VGGNQVFSFAEHGLL 148 +G N+ S E GL+ Sbjct: 228 IGDNRFVSLKESGLM 242 >UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia RepID=B4CZF8_9BACT Length = 231 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 7/155 (4%) Query: 1 MTPGERSLIQRALKTLDRHLHEP--GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 + P + + A R E S + L M L RE R++ L+ + Sbjct: 77 VGPAKAVQLVAAFGLASRLARETLARQRLDSPELINDLLGPEMRALGRESLRLVLLDTKY 136 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 LI E + G++N + HPREV + AL ++A AV+L HNHPSG+ TPS AD +T RLV Sbjct: 137 LLIRVEEISHGSLNESIAHPREVFRPALIYSAYAVILVHNHPSGDPTPSSADHQLTRRLV 196 Query: 119 QALGLVDIRVPDHLIVGGNQ-----VFSFAEHGLL 148 Q L+ IR+ DH+I+G FSF E G++ Sbjct: 197 QGAELLQIRLLDHVILGTGDNGRLPYFSFKEAGII 231 >UniRef50_B5V5B9 RadC n=5 Tax=Firmicutes RepID=B5V5B9_BACCE Length = 168 Score = 150 bits (379), Expect = 1e-35, Method: Composition-based stats. Identities = 53/146 (36%), Positives = 76/146 (52%) Query: 3 PGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIA 62 P +R I + + L S A + G +RE F VL L+ +NQ Sbjct: 23 PAKRVDIVKLKMIKESSLLYKERRVKSPEDASLLFRQFLDGADREYFIVLCLDIKNQPTT 82 Query: 63 GETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALG 122 G++N + VHPREV+K A+ NAA++++AHNHPS + TPS D +T+RL++A Sbjct: 83 INVCHIGSLNSSIVHPREVLKPAIISNAASIIVAHNHPSNDPTPSSEDLEVTKRLIEAGK 142 Query: 123 LVDIRVPDHLIVGGNQVFSFAEHGLL 148 +V I V DHLIV S E G + Sbjct: 143 VVGIEVLDHLIVCEESFVSLKEKGYM 168 >UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes RepID=C0BM81_9BACT Length = 231 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 52/123 (42%), Positives = 79/123 (64%) Query: 26 AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRA 85 + +S+ AA L + GL EEF VLYL+N N LI L G T V R V+++A Sbjct: 109 SLSSSGAAFSILKPVLIGLTYEEFWVLYLDNSNVLIERSLLGKGGFTATVVDIRLVLQQA 168 Query: 86 LYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEH 145 + A A+++AHNHP+G + PS +D+ +T++L +A ++DI++ DH+IVG N+ FSFA+ Sbjct: 169 IRWGATAMIVAHNHPTGNLKPSHSDKALTQKLKEAAKVLDIKLLDHIIVGKNEYFSFADQ 228 Query: 146 GLL 148 LL Sbjct: 229 NLL 231 >UniRef50_C2KVW9 Possible DNA repair protein RadC n=1 Tax=Oribacterium sinus F0268 RepID=C2KVW9_9FIRM Length = 229 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 44/143 (30%), Positives = 75/143 (52%) Query: 6 RSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGET 65 + + + A + +R + E +F S + ++ + L EE VL+L+ + QL+ Sbjct: 87 QVIGELAKRIWNRKIREEVQSFRSPGSVLQYFKEELRHLSYEEVHVLFLDTKAQLLKDFL 146 Query: 66 LFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVD 125 L G+ N + + RE+ AL + +L HNHPSG+ PS+ D TE + +A + Sbjct: 147 LSKGSSNASILSGREIFMEALRAASVCFILVHNHPSGDPHPSREDERATEEIYKAGEYLG 206 Query: 126 IRVPDHLIVGGNQVFSFAEHGLL 148 I + DH+I+G NQ +SF E G + Sbjct: 207 IHLMDHIIIGDNQYYSFKEQGKI 229 >UniRef50_C3WF45 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WF45_FUSMR Length = 154 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 59/144 (40%), Positives = 93/144 (64%), Gaps = 6/144 (4%) Query: 11 RALKTLDRHLHEPGVA------FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 LK L ++ + G+ + E+L +N++ EEF++L+LNN N+LIA + Sbjct: 11 EELKELIHYISKEGIKRRDLTTIKNKENLLEFLKINLSPRNNEEFKILFLNNANKLIAEK 70 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 TLF GTI+++ V+PR V++ L +N+A V+LAHNHPSG + PSK D +TE L + L + Sbjct: 71 TLFYGTIDKSAVYPRVVLEEVLRYNSAGVILAHNHPSGNLRPSKQDIQLTEALQELLEKI 130 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 ++ V DH+I+G ++ FSF E GL+ Sbjct: 131 NVMVLDHMIIGDDEYFSFREEGLI 154 >UniRef50_Q6TFX1 ORF25 n=3 Tax=Enterobacteriaceae RepID=Q6TFX1_ERWAM Length = 149 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 76/148 (51%), Positives = 99/148 (66%), Gaps = 1/148 (0%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 + E ++I++A + + T AAR L +A RE F +LN N + Sbjct: 3 FSAEELNIIRQADAIIAGKITTTD-FITGADAARSLLRFRLAAEPRESFCAFFLNCHNGV 61 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 IA E LF GTI+ VHPR V++RAL+HNAAAVVLAHNHPS TPS+AD+LITERL Q Sbjct: 62 IAFEELFKGTISSVTVHPRIVLQRALHHNAAAVVLAHNHPSANTTPSQADKLITERLAQV 121 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 LG+VD++V DHLIVGG+ ++SFAEHGL+ Sbjct: 122 LGMVDVKVLDHLIVGGSDIYSFAEHGLI 149 >UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9V0_9FIRM Length = 224 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 55/146 (37%), Positives = 81/146 (55%), Gaps = 3/146 (2%) Query: 6 RSLIQRALKTLDRHLHEPGV---AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIA 62 ++L A L + + + V EW + +E F LYL+ +++LI+ Sbjct: 78 KALQLLASVELSKRVIKSKVYHAPILKPEDVIEWFKFEYGTMSQECFIALYLDTKSKLIS 137 Query: 63 GETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALG 122 LF GT+N + VHPREV K A NA +V++AHNHPSG+ TPSKAD +T ++V Sbjct: 138 HRVLFKGTLNESVVHPREVFKEAFLQNANSVLIAHNHPSGDCTPSKADFEVTYKMVHVAM 197 Query: 123 LVDIRVPDHLIVGGNQVFSFAEHGLL 148 + + + DH+IV NQ +SF EH L Sbjct: 198 TMGVCLVDHIIVCKNQYYSFKEHKYL 223 >UniRef50_C8PDJ9 DNA repair protein RadC n=1 Tax=Lactobacillus iners DSM 13335 RepID=C8PDJ9_9LACO Length = 205 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 47/148 (31%), Positives = 80/148 (54%), Gaps = 4/148 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 ++ G L+ R E +F S+ +L ++G +E +Y++ +N++ Sbjct: 62 LSLGAELLLNRVKAI----KREKMESFCSSSQIGYYLSNVLSGCYQEHLMAVYVDVKNKI 117 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 IA + +F GT+N+ +HPR++ + A+ +NAA LAHNHPS ++TPS+ D +T+++ Sbjct: 118 IAEKVIFKGTLNQAIIHPRDIFRWAIIYNAAGFFLAHNHPSEDLTPSEQDIQVTKKISSV 177 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + IR DH IV SF E LL Sbjct: 178 SECMGIRFLDHFIVNTGNYLSFKEMELL 205 >UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AWS8_STRM9 Length = 211 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 46/125 (36%), Positives = 78/125 (62%) Query: 24 GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIK 83 + ++L +ERE F+VLY N +N LI E +F GTI+++ V+ RE++K Sbjct: 87 EKKISCFEDLVKYLKFQYVDMEREVFKVLYFNTKNVLIKDENIFYGTIDKSVVYVREIVK 146 Query: 84 RALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFA 143 L +NA ++++ HNHPSG + PS DR +T++++ L L+D+R+ DH+I+ +SF Sbjct: 147 NILKYNAKSIIIVHNHPSGNLEPSNDDRCLTKKIIDVLKLIDVRLSDHIIISNKGYYSFL 206 Query: 144 EHGLL 148 E+G + Sbjct: 207 ENGQI 211 >UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes RepID=Y413_FLAJ1 Length = 229 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 52/151 (34%), Positives = 82/151 (54%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHE---PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + I AL+ R E TS++ A + + L EEF VL+LNN Sbjct: 79 IGEAKAVSIVAALELGRRQRAEDILKLKKITSSKDAFTIMQPIIGELPHEEFWVLFLNNS 138 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N++I+ L G I T V R V K L + A ++L HNHPSGE+ PS+AD+ IT+++ Sbjct: 139 NKVISKAQLSKGGIAGTIVDVRLVFKLGLENGATGLILCHNHPSGELNPSQADKQITKKI 198 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A ++D+++ DHLI+ + +SF + G+ Sbjct: 199 KTAGEILDVKILDHLIITETKYYSFVDEGIF 229 >UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z2T6_9GAMM Length = 223 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 54/140 (38%), Positives = 80/140 (57%), Gaps = 1/140 (0%) Query: 8 LIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLF 67 + A + + L E + ++L + RE F L+L+ Q QL+A +F Sbjct: 81 ALLLATRLAEEELFERS-PLKDPGSCYKYLQHHYLLQSREVFTCLFLDTQRQLLACRDMF 139 Query: 68 TGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIR 127 GT+N V+PRE++ AL A+A+++AHNHPSG + PS AD +T+RL +ALGL+DI Sbjct: 140 FGTLNTAPVYPREIVAMALKMGASAIIVAHNHPSGCLAPSVADIQLTDRLRRALGLIDID 199 Query: 128 VPDHLIVGGNQVFSFAEHGL 147 + DHLIV + S A GL Sbjct: 200 LLDHLIVAQGRYLSMASEGL 219 >UniRef50_A6Q5Q5 DNA repair protein RadC n=2 Tax=unclassified Epsilonproteobacteria RepID=A6Q5Q5_NITSB Length = 220 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 1/148 (0%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 + + + I A++ R+L + S E L ++E F YL+ N++ Sbjct: 74 LGIAKAAQIVSAVELSKRYLFKQHKTVISANDVYEELKEYF-DKKQEYFIAFYLDGANRI 132 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 + GT+N++ VHPREV A+ A++++AHNHPS +TPS+ D L+T++L Q+ Sbjct: 133 CEKRVITIGTLNQSLVHPREVFAPAIESRCASIIVAHNHPSNNLTPSREDILVTQKLKQS 192 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++ I + DH+I S E G+L Sbjct: 193 GKILGIELLDHIIFSKEGFVSLQEEGIL 220 >UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21_RHOBA Length = 319 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 4/140 (2%) Query: 9 IQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLE----REEFRVLYLNNQNQLIAGE 64 + R R P V TST A E+ A L +EEF ++ L+ +++ I Sbjct: 179 LGRRATEAARERPVPIVKITSTTEATEYCAQKFAYLAGDAVQEEFHIVTLDTKHKPIRTH 238 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 + GT++ + VHPREV + A+ AAAV+L HNHPSG+ TPS+ D +TERL +A L+ Sbjct: 239 RITVGTLDSSLVHPREVFRPAIRDAAAAVLLVHNHPSGDPTPSREDHAVTERLTEAGKLI 298 Query: 125 DIRVPDHLIVGGNQVFSFAE 144 I V DH++V + S E Sbjct: 299 GITVLDHIVVAKQRCLSLRE 318 >UniRef50_Q0FHF8 DNA repair protein RadC n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FHF8_9RHOB Length = 168 Score = 148 bits (375), Expect = 5e-35, Method: Composition-based stats. Identities = 55/151 (36%), Positives = 82/151 (54%), Gaps = 4/151 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 + E I A L RH V S ++L LN E FRVL L+ +N+L Sbjct: 17 FSEAEIETIDAARDILRRHARATAV-LQSWTMLTDYLALNAVRERVEVFRVLLLDRKNKL 75 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 I + + G+I+ V+ EV++ AL +A+A++L HNHPSG+ PS+AD +T ++V A Sbjct: 76 IRDKIMSRGSIDHVPVYVSEVMRSALVLDASALILCHNHPSGDPQPSQADIDMTRKIVDA 135 Query: 121 LGLVDIRVPDHLIVGGNQ---VFSFAEHGLL 148 ++DI + DHLIVG + FS G+L Sbjct: 136 CRVMDITLHDHLIVGFGREQAAFSMRAAGML 166 >UniRef50_C7GE95 DNA repair protein RadC n=2 Tax=Roseburia RepID=C7GE95_9FIRM Length = 243 Score = 148 bits (375), Expect = 5e-35, Method: Composition-based stats. Identities = 42/147 (28%), Positives = 80/147 (54%), Gaps = 4/147 (2%) Query: 6 RSLIQRALKTLDRHLHE----PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLI 61 +++ + + L + + + P V T+ R ++ + ++ +E V +N+ + Sbjct: 95 KAIQLKCIAELSKRIAQTKSAPNVCMTNPRTIADYYMEHLRHENKEHLIVCMFDNKCHMK 154 Query: 62 AGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQAL 121 + L G+ N T V PREV + A+ +AA ++L HNHPSG PS AD ++T+R++ Sbjct: 155 GDKLLSVGSANETIVSPREVFETAINCHAAHLILVHNHPSGIPEPSHADDVVTKRILNCG 214 Query: 122 GLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L+ I + DH+I+G + FS+ E+ + Sbjct: 215 QLMGIPLSDHVIIGDHSYFSYRENNRI 241 >UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34E02 Length = 243 Score = 148 bits (374), Expect = 5e-35, Method: Composition-based stats. Identities = 43/139 (30%), Positives = 75/139 (53%) Query: 10 QRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTG 69 + + + + +F + + + +M +E+EE ++ N +N LI LF G Sbjct: 105 ELSRRIWKTLAQKEIKSFDGPESIAAFYMEDMRHMEQEELHLMMFNTKNMLIRESCLFRG 164 Query: 70 TINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVP 129 T+N + RE+ AL ++A + L HNHPSG+ +PS D +T ++ QA L+ + + Sbjct: 165 TVNASVASAREIFIEALRYHAVRLALVHNHPSGDPSPSGEDIRLTRQVAQAGELLGVTLL 224 Query: 130 DHLIVGGNQVFSFAEHGLL 148 DH+I+G N FSF E G++ Sbjct: 225 DHVIIGDNSYFSFKERGII 243 >UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EK65_PEDAC Length = 225 Score = 148 bits (374), Expect = 6e-35, Method: Composition-based stats. Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 5/150 (3%) Query: 3 PGERSLIQRALKTLDRHLHEP----GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 P E ++ A++ R +P G S + ++ +E +L L+ +N Sbjct: 74 PAESLALEAAIELGRRVQRQPIHLLGKVLGSAQ-IGNLMVARFQKNPQEHLVLLCLDTKN 132 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 Q+ +F G +N EVHPRE++ L +++ +L HNHPSG V PS D T+++ Sbjct: 133 QIKQERVIFKGGLNSAEVHPREIMAEVLRYSSNGFILVHNHPSGNVEPSMNDVAFTKKMK 192 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + L+ IR+ DHLIVG +S AE+ +L Sbjct: 193 KIGDLMGIRLIDHLIVGDQTYWSAAENRVL 222 >UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A699_NATTJ Length = 241 Score = 147 bits (373), Expect = 7e-35, Method: Composition-based stats. Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 4/148 (2%) Query: 4 GERSLIQRALKTLDRHLHE---PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 + ++ A + +R + TS + + RE F + LN ++ L Sbjct: 94 AKSIKLKAAFELANRCMAREQLTMDKITSPEDIFRLMNFRLKTETREHFLAVMLNTKSYL 153 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 + + + G++N T VHPREV RA+ +A V+L HNHPSG+ PS+ D +T RLV A Sbjct: 154 LKIDLISIGSLNATIVHPREVFNRAIRASACGVILVHNHPSGDPEPSQDDIKLTNRLVAA 213 Query: 121 LGLVDIRVPDHLIVGGNQVFSF-AEHGL 147 L+ I + DH+I+G + +SF E+ L Sbjct: 214 GDLLGIPIMDHVIIGHQKFYSFSRENHL 241 >UniRef50_A9I305 DNA repair protein radC homolog n=3 Tax=Proteobacteria RepID=A9I305_BORPD Length = 177 Score = 147 bits (373), Expect = 8e-35, Method: Composition-based stats. Identities = 51/138 (36%), Positives = 78/138 (56%) Query: 9 IQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFT 68 + A + L + A + + ++G+ E VLYLN+Q ++I + Sbjct: 38 VLAAARVAAESLIGDRADMGNPNAVKHYFQAKLSGMGHEVAAVLYLNSQFKVIRYMEMSH 97 Query: 69 GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRV 128 GT+ + V+PRE++K AL +AAA++++HNHPSG PS+AD +T L AL LVD+R+ Sbjct: 98 GTLTQASVYPREIVKTALRLDAAAIIMSHNHPSGIPEPSEADLALTRHLKHALALVDVRL 157 Query: 129 PDHLIVGGNQVFSFAEHG 146 DH+IV G S AE G Sbjct: 158 VDHIIVTGQNTTSLAERG 175 >UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNR3_HIRBI Length = 272 Score = 147 bits (373), Expect = 8e-35, Method: Composition-based stats. Identities = 50/122 (40%), Positives = 76/122 (62%) Query: 27 FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 ++ A + + + E+FRVL+L+++NQLIA E GTIN V+PRE+ KRAL Sbjct: 151 ISNWGALLSHVRIALQHETEEQFRVLFLDHKNQLIADERQSQGTINHAPVYPRELAKRAL 210 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 +A+A++L HNHPSG+ TPS+AD +T ++ A ++I + DHLIVG + S Sbjct: 211 ELSASALILVHNHPSGDPTPSRADIDVTREIMDAFEPLEITIHDHLIVGKKGITSLKAKN 270 Query: 147 LL 148 L+ Sbjct: 271 LI 272 >UniRef50_A8YUM9 DNA repair protein RadC n=9 Tax=Lactobacillus RepID=A8YUM9_LACH4 Length = 207 Score = 147 bits (373), Expect = 9e-35, Method: Composition-based stats. Identities = 43/139 (30%), Positives = 77/139 (55%) Query: 10 QRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTG 69 + + L + S+ +L + G ++EE LY++N N+++A + +F G Sbjct: 69 EEVMDRLRMASSKRKPVLASSVEVGTYLADKLVGHKQEELWALYVDNGNRIVAEKKIFQG 128 Query: 70 TINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVP 129 T+N++ HPRE+ + A+ ++ + + +AHNHPSG++ PS D +T+ L +A ++ I + Sbjct: 129 TLNKSVAHPREIFRWAVIYDCSGIFIAHNHPSGKLIPSSNDFELTKDLYRAAKMMKIDLL 188 Query: 130 DHLIVGGNQVFSFAEHGLL 148 DH IVG Q S E L Sbjct: 189 DHFIVGQGQYLSMREKELF 207 >UniRef50_A3ER13 DNA repair protein (RadC) n=3 Tax=Leptospirillum RepID=A3ER13_9BACT Length = 237 Score = 147 bits (372), Expect = 9e-35, Method: Composition-based stats. Identities = 48/151 (31%), Positives = 76/151 (50%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDR---HLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 M + + I ++ R S R + L + ++E F VL L+ + Sbjct: 81 MGLAKAAQIMAGIELGRRVSGKARSFRPEIRSARDVYDILGARLRDEKKESFWVLLLDQR 140 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++L + G+++ T VHPRE + A+ +AAAV+ HNHPSG+ PS D +TERL Sbjct: 141 HRLQNAVRISEGSLSMTLVHPREAFQPAIRDSAAAVLFVHNHPSGDPEPSSDDWSLTERL 200 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + L+ IRV DH+++G + S E G L Sbjct: 201 KECGELLGIRVLDHVVLGDHAWVSLEERGGL 231 >UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus RepID=D2RM81_ACIFE Length = 220 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 54/152 (35%), Positives = 82/152 (53%), Gaps = 5/152 (3%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGV----AFTSTRAAREWLILNMAGLEREEFRVLYLNN 56 + P + ++I AL+ L R L G ++ + E F V+ LN+ Sbjct: 70 IGPAKATVILAALE-LGRRLAGAGTRPFRTIHCPEDGAMLVMPRLRYENHEHFLVVLLNS 128 Query: 57 QNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITER 116 + ++I E + G++N + VHPRE AL H+AAA++ HNHPSG+ TPS+ DR +T Sbjct: 129 KGKVIGIEPVSEGSLNASVVHPREAFAPALLHHAAAILAVHNHPSGDPTPSREDRELTRT 188 Query: 117 LVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L ++ I + DHLI+G +SF EHGLL Sbjct: 189 LWDTGKVMGIPLVDHLIIGDGVYYSFKEHGLL 220 >UniRef50_Q3A6E7 DNA repair protein, RadC-like n=3 Tax=Desulfuromonadales RepID=Q3A6E7_PELCD Length = 166 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 56/125 (44%), Positives = 79/125 (63%), Gaps = 2/125 (1%) Query: 24 GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIK 83 AFTS R E L + +E F L+L+N+N+L+ + + G+++ + VHPREV K Sbjct: 44 DEAFTSPRKVAEMLAF-LKAESKEYFMALHLDNKNRLLCLDRVSVGSLSASIVHPREVFK 102 Query: 84 RALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFA 143 AL +AA +VL HNHPSG+ PS D +T RLV+A ++ I V DH+I+G + FSFA Sbjct: 103 SALLSSAAGLVLVHNHPSGQTEPSHEDEEVTTRLVKAGEMLGIHVLDHIILG-DGFFSFA 161 Query: 144 EHGLL 148 E GLL Sbjct: 162 EQGLL 166 >UniRef50_C6VI64 DNA repair protein n=3 Tax=Lactobacillus plantarum RepID=C6VI64_LACPJ Length = 211 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 53/119 (44%), Positives = 74/119 (62%) Query: 30 TRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHN 89 + L + A LE+E+ ++L L+ +NQ+I + +F GT+N PRE+IK AL Sbjct: 87 SEQLGAVLARDFANLEQEQLQLLCLDTKNQVIKRQVVFQGTLNSCPAQPREIIKVALTTP 146 Query: 90 AAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A VV+AHNHPSG+VTPSK D T+RL A L+ + + D I+G N FSFAE G+L Sbjct: 147 TARVVIAHNHPSGDVTPSKKDVEFTKRLQLACELMGLPLLDSFIIGVNDYFSFAEQGVL 205 >UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185C66E Length = 221 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 51/144 (35%), Positives = 73/144 (50%), Gaps = 3/144 (2%) Query: 1 MTPGERSLIQRALKTLDRHL---HEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + I A + R HEP + R + + L EEF VLYLN+ Sbjct: 75 IGEAKAITILAATEMGRRRAAETHEPQPKIEAPRHVFTLMQPLIGDLPHEEFWVLYLNSA 134 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N++I L +G I T V R + K AL A +++L HNHPSG TPSK D +TER+ Sbjct: 135 NRVIHKCRLSSGGITHTTVDIRLLFKNALEQGAVSLILVHNHPSGSTTPSKEDLELTERV 194 Query: 118 VQALGLVDIRVPDHLIVGGNQVFS 141 A +DI++ DH+IV + +S Sbjct: 195 RNAGDTLDIKLLDHIIVTEKEYYS 218 >UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2URH1_AKKM8 Length = 246 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 8/147 (5%) Query: 4 GERSLIQRALKTLDRHLHEP--GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLI 61 + + + A + R L E + ++L M E+E VL L+ + +LI Sbjct: 81 AKAATLSAAFELGARALRETLSRQPIQTPEDVYDYLTTAMRWKEKETVLVLLLDTKCRLI 140 Query: 62 AGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQAL 121 + +GT+N + HPR++++ + HNA +LAHNHPSG PS+ D L+TER+ + Sbjct: 141 KPVEISSGTLNESIAHPRDILRPTVIHNAYGFILAHNHPSGNPAPSRTDDLLTERVRECS 200 Query: 122 GLVDIRVPDHLIVGG------NQVFSF 142 L+ +R DH+I+G +S+ Sbjct: 201 KLLGVRFLDHVIIGKPTETTNKNYYSY 227 >UniRef50_B3JIE2 Putative uncharacterized protein n=10 Tax=Bacteroidales RepID=B3JIE2_9BACE Length = 220 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 4/151 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHE---PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 +TP + + A++ L + L E A S+ + + + + EE VL LN+ Sbjct: 68 LTPSRKKVAYAAIE-LYKRLKEGQVESPALLSSNNVYKMMHPVLCDIATEEMWVLLLNSS 126 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++LI + G IN V R ++K+ALY+NA + ++ HNHPSG PS AD +TE + Sbjct: 127 SKLIRKVRISCGGINTAPVDIRVIMKQALYYNAVSFIMVHNHPSGARKPSSADDRLTEAV 186 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A +DIR+ DH+IV GN +S+A+ G L Sbjct: 187 KKAAETLDIRLVDHVIVAGNNYYSYADEGRL 217 >UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9Z9_DESAH Length = 279 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 53/135 (39%), Positives = 83/135 (61%), Gaps = 1/135 (0%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 + L++ + V ++ +L + RE F ++L+ +N+++A E LF G+++ Sbjct: 134 RYLEQRIRSKTV-LKNSHDLCAFLGHAIGHRPREVFVGIFLDAKNRVLASEILFEGSLSS 192 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 + V+PREVI +AL H AAA++ AHNHPSGE +PS D IT RL AL I V +HLI Sbjct: 193 SAVYPREVIAKALEHRAAALIFAHNHPSGETSPSPEDLAITRRLFFALAHAGITVHEHLI 252 Query: 134 VGGNQVFSFAEHGLL 148 GG + +SFA+ G++ Sbjct: 253 TGGERFYSFADQGII 267 >UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteria RepID=Y3126_ACIAD Length = 271 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 46/142 (32%), Positives = 82/142 (57%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 ++ + + L+ + H+ + S+R ++L + G ++E F VL L+++ + + + L Sbjct: 101 AVKELGRRYLNHYFHQDALNLNSSRLVLDYLRYELLGEKQEVFAVLCLDSELRKLNFKKL 160 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 F G++N + ++ AL +A +V+AHNHP G+ PS AD +T +L QA LV+I Sbjct: 161 FYGSLNACNISINHTLRYALQQHACHIVIAHNHPFGKAEPSAADLDLTHQLYQACQLVEI 220 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 ++ DH I+ + FSFAE LL Sbjct: 221 KLLDHFIIAKDGTFSFAERALL 242 >UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID=D2BJ47_DEHSV Length = 275 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 52/140 (37%), Positives = 88/140 (62%), Gaps = 4/140 (2%) Query: 13 LKTLDRHLHEPGV----AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFT 68 ++ + R + G+ + + ++L M GL++E F+V+YL++Q++++ LFT Sbjct: 103 IREVSRRYLKDGIMEKPVCNTAQQVFDYLYCAMRGLKKEVFKVIYLDSQHRVLELADLFT 162 Query: 69 GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRV 128 GT+ + PREVI A+ NA+A++ HNHPSG++ PS+AD+ +T LV A ++ IR Sbjct: 163 GTVASGSIVPREVIAAAISQNASALIFVHNHPSGKIEPSQADKDVTRELVYAAMVMKIRA 222 Query: 129 PDHLIVGGNQVFSFAEHGLL 148 DH+I+G N FSFA G++ Sbjct: 223 LDHIIIGDNCYFSFAAAGIM 242 >UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter pasteurianus RepID=C7JGI7_ACEP3 Length = 249 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 51/141 (36%), Positives = 82/141 (58%) Query: 8 LIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLF 67 L + A + R + +L M +RE+ RVL+LN++++L+A + + Sbjct: 109 LAREAGLRIQRARLRRSGILADSTQLYAYLRAVMGPEKREQVRVLFLNDKHELLADDVMG 168 Query: 68 TGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIR 127 GT++ T V+PRE++ RAL NA +VL HNHPSG+ TPS D ++T ++ A +++I Sbjct: 169 QGTVDHTPVYPREIVARALQLNATMLVLVHNHPSGDPTPSADDVVMTTQICGAAKIMNIH 228 Query: 128 VPDHLIVGGNQVFSFAEHGLL 148 V DH+IV G ++ S E G L Sbjct: 229 VWDHIIVAGEKLLSMREAGFL 249 >UniRef50_Q03R16 DNA repair protein n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03R16_LACBA Length = 220 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 5/148 (3%) Query: 5 ERSLIQRALKTLDRHLHEP----GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 +R + A++ P G S++ + L+ ++ L +E+ VL L+ Q+++ Sbjct: 60 QRQALLTAIELGRWAEKAPRPILGEVLASSQ-LGQVLMDDLRYLLQEQLEVLALDAQHRI 118 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 I +T+F GT+N VHPRE+ + A+ AA V++AHNHPSG+ PS +DR +RL Sbjct: 119 IERQTVFQGTLNSCPVHPREIFRVAVMSGAATVIVAHNHPSGQPQPSTSDRAFMQRLAAC 178 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L+ I + D +VG + FSF E G+L Sbjct: 179 GQLMGIPLLDGFVVGLHSYFSFKEAGIL 206 >UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus RepID=C2BCF6_9FIRM Length = 226 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 51/142 (35%), Positives = 85/142 (59%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 + +Q + ++ L++ S A E++ ++ +RE F + LNN+N++I+ E + Sbjct: 85 ASLQFGKRIKEKILNKKKYQINSNEEAYEFIKDTISLKDREYFYTILLNNKNEVISKELI 144 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 G ++ + V+PREV K A+ +A +++LAHNHPSG +PSKAD LIT RL+ A ++DI Sbjct: 145 SIGDLSSSIVNPREVFKPAIKKSAKSMILAHNHPSGNPSPSKADLLITHRLIDAGEILDI 204 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 V DHLI+G S + + Sbjct: 205 TVLDHLIIGHGTYVSLKKDNYI 226 >UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID=Y2409_LEGPL Length = 227 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 58/151 (38%), Positives = 91/151 (60%), Gaps = 4/151 (2%) Query: 1 MTPGERSLIQRALKTLDRHLH---EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + +Q A + R + + ++T+ +L + + E F L+L+NQ Sbjct: 74 LGEVRYAQLQAAKEICHRSDFIDLQKEIRLSNTQQTYAFLKKRLRDYKNETFAALFLDNQ 133 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 +++IA E LF+GTIN V+PR +++R L NAAA++LAHNHPSG S+ D ITER+ Sbjct: 134 HRIIAYEELFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDASQQDLAITERI 193 Query: 118 VQALGLVDIRVPDHLIVGGNQVFS-FAEHGL 147 AL LVD R+ DH+++G N+V+S FAE+ Sbjct: 194 RDALDLVDARLLDHIVIGDNEVYSIFAENKW 224 >UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMV6_9DELT Length = 226 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 43/132 (32%), Positives = 68/132 (51%) Query: 17 DRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEV 76 DR S + EEF + ++N+N+LI E + GT+++ V Sbjct: 95 DRSGLSTRSTLDSPEKVARLARSRLQFKSIEEFWAIMVDNKNRLIDFEKMSRGTVDQAPV 154 Query: 77 HPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGG 136 PRE++ AL A+ V+L HNHP G+ PS DR +T ++ + + +R+ DH+I+ Sbjct: 155 FPREILTVALEKRASGVILLHNHPGGDPHPSFQDRELTRKIREVSTALGVRLLDHVIISE 214 Query: 137 NQVFSFAEHGLL 148 + FSF EHG L Sbjct: 215 DSFFSFQEHGFL 226 >UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleidia extructa W1219 RepID=D2MNQ5_9FIRM Length = 223 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 43/119 (36%), Positives = 74/119 (62%) Query: 29 STRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYH 88 +WL + +E+F V++L + ++++ + LF GTIN + V PRE+ K AL Sbjct: 104 HPSVLFDWLKQEIGTSLQEKFLVVFLASDQRVLSYKILFVGTINASMVFPREIFKEALLL 163 Query: 89 NAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGL 147 N+ ++L HNHPSG ++PS+ D +T+R+ +A L+ ++V DH+IV + FSF + G+ Sbjct: 164 NSPNIILVHNHPSGNLSPSQEDISLTKRIKEAGQLMGVKVLDHIIVTQSDYFSFVQEGI 222 >UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter oxydans RepID=Q5FNC4_GLUOX Length = 216 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 55/142 (38%), Positives = 82/142 (57%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 ++Q A +R P + + ++L +A E+FR+L+LN +N LIA E Sbjct: 75 RVLQEAALRYNRARLPPEDVLDNEQKLLDYLTARLARENIEQFRILFLNEKNSLIADEAQ 134 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 GT+N T V+PREV +RA+ A A+VL HNHPSG+ TPS+AD +T ++ AL +V + Sbjct: 135 ARGTVNHTPVYPREVARRAVEIGATALVLVHNHPSGDPTPSEADLQMTMQVQAALEVVGV 194 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 + DH I+G + SF LL Sbjct: 195 TIADHFIIGNGRHTSFRRSNLL 216 >UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepID=Q1RK76_RICBR Length = 249 Score = 145 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 61/143 (42%), Positives = 90/143 (62%), Gaps = 4/143 (2%) Query: 6 RSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGET 65 R LI RALK + +++ S + ++L +NM + E+FRVL+LN +N LIA E Sbjct: 111 RELINRALK--QKIINKN--IIASWGSLIDYLKVNMGNMRLEQFRVLFLNKKNILIADEV 166 Query: 66 LFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVD 125 L GTI++ V+PRE+IKRAL++ A+ ++L HNHPSG PSKA +T +V ++ Sbjct: 167 LSQGTIDQAAVYPREIIKRALFNEASNIILVHNHPSGSPDPSKAGIDMTNIIVDMCKTIN 226 Query: 126 IRVPDHLIVGGNQVFSFAEHGLL 148 I V DH+I+ N+ FSF + LL Sbjct: 227 IIVHDHVIISNNKYFSFKSNMLL 249 >UniRef50_O67541 UPF0758 protein aq_1610 n=2 Tax=Aquificaceae RepID=Y1610_AQUAE Length = 231 Score = 145 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 46/145 (31%), Positives = 78/145 (53%), Gaps = 3/145 (2%) Query: 6 RSLIQRALKTLDRHLH--EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAG 63 ++L +AL L + + ++ + + A E+L RE LYL+ N+L+ Sbjct: 88 KALQVKALVELSKRFKGGKSRISIRNPQEAFEFLKDKF-DERRESLIALYLDLSNRLLDW 146 Query: 64 ETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGL 123 E + G +N P++++ +A+ +A +++AHNHP GE +PS D TERL +A L Sbjct: 147 EVVAIGNVNTVFSKPKDILFKAVKLSANGIIIAHNHPQGEPSPSNEDLNFTERLKKACEL 206 Query: 124 VDIRVPDHLIVGGNQVFSFAEHGLL 148 + + DHLI+ + FSF E G+L Sbjct: 207 LGFELLDHLILSEGRYFSFREEGVL 231 >UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID=B9MPC4_ANATD Length = 232 Score = 145 bits (367), Expect = 3e-34, Method: Composition-based stats. Identities = 49/142 (34%), Positives = 80/142 (56%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 SLI + + + + AA E++ G + E F V+ L+ Q +I L Sbjct: 86 SLISQISRRYLADKNRKTFQLRNVEAAAEYIKSLFVGRKNEVFYVICLDTQLNVIYSVPL 145 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 F GT+ V+PR+V++ + +NA++V+LAHNHP G V PS D T+++V AL + + Sbjct: 146 FEGTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSVRPSMDDIKTTQKIVNALSTIGV 205 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 V DH IV ++ +SFA++G+L Sbjct: 206 AVNDHFIVAKDEYYSFAQNGML 227 >UniRef50_B0MF12 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MF12_9FIRM Length = 282 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 47/126 (37%), Positives = 68/126 (53%) Query: 23 PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVI 82 + A + L+ ++RE F VL L Q+I GT+N + PRE+ Sbjct: 14 SEDKIQNPNDAVQLLLKEFDSVDRELFFVLNLKTNGQVINVNIASMGTLNSCILSPREIF 73 Query: 83 KRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSF 142 K ++ NAA+V+L HNHPSG+ TPSK D L+T+RLV L+ I V DH+I+G S Sbjct: 74 KASILSNAASVILMHNHPSGDCTPSKQDVLMTKRLVACGELIGITVLDHVILGKETYLSM 133 Query: 143 AEHGLL 148 E ++ Sbjct: 134 KEANMM 139 >UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales RepID=Q2GL92_ANAPZ Length = 232 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVA---FTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 M +++ + L R + + ++L + + E F VLYLN + Sbjct: 82 MGDSSVAMLVCVREALIRVMRGNITSCVMLDKWPKLIDYLKVKIGNSTIENFLVLYLNKR 141 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 LIA E TGT++ T ++ REVI++AL A +V++HNHPSG+ PSKAD +T +L Sbjct: 142 YSLIADEVQSTGTVDETPLYIREVIRKALLCGAVYIVISHNHPSGDPKPSKADINVTNKL 201 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A +DI + DH+IV + +SF HGLL Sbjct: 202 RIACNSMDIELVDHVIVTSKRHYSFKTHGLL 232 >UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organisms RepID=A5FRP1_DEHSB Length = 228 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 48/151 (31%), Positives = 78/151 (51%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGV---AFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + ++ A + R G + + + + ++E F L L+ + Sbjct: 78 IGLAKACQLKAAFELAKRAGGIKGEYQPCIKTPEDVFQIIYPLVCDEKKEYFFCLMLDVK 137 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++LI + G++ + VHPREV K AL +AA+V+LAHNHPSG+ PS D ++ RL Sbjct: 138 SRLIRVGHISVGSLEESVVHPREVFKEALSASAASVILAHNHPSGDTEPSHDDIGLSARL 197 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A G++ I V DH+I+GG S GLL Sbjct: 198 REAGGIMGIEVLDHIIIGGQSFTSLKRQGLL 228 >UniRef50_A7V531 Putative uncharacterized protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V531_BACUN Length = 196 Score = 145 bits (366), Expect = 4e-34, Method: Composition-based stats. Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 2/150 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGV--AFTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 +TPG R + A++ R L + ++ E + + L EEF V+ +N Sbjct: 47 LTPGRRRVAVAAVEMYKRQLSQQVERRQIRMSKDVYELMEPLIGDLPNEEFWVVSINQAG 106 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 ++I + G I++T R +++ + A HNHPSG PS D+ +TE+L Sbjct: 107 RIIKKVRISVGGIDQTSADIRLIMRVLIDTGAVQFAAVHNHPSGNSRPSNEDKRLTEQLK 166 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A GL +IR+ DH+I+ +SF + GL+ Sbjct: 167 KAAGLFNIRMIDHVIITNGGYYSFGDEGLI 196 >UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon GZfos29E12 RepID=Q64AS5_9ARCH Length = 403 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 39/115 (33%), Positives = 69/115 (60%) Query: 25 VAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKR 84 V + + + ++E F L L+++N+LI + + GT++ + VHPREV K Sbjct: 281 VTIEKPEDVYNYFVDELKDKKKEHFYALLLDSKNKLIKKDLVSVGTLDNSLVHPREVFKE 340 Query: 85 ALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQV 139 A+ ++AA V+L HNHPSG+ PS+ D IT+++ +A +++I+V DH+I+ Sbjct: 341 AIKNSAAGVILVHNHPSGDPEPSENDVEITQKIAKAGNILNIKVLDHVIIAEKGW 395 >UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepID=B2V8J4_SULSY Length = 229 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 79/145 (54%), Gaps = 3/145 (2%) Query: 6 RSLIQRALKTLDRHL--HEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAG 63 ++L A+ + + + H + TS A +L ++ +E LYLN+ N LIA Sbjct: 86 KALQILAIIEIAKRMDDHAEKIKITSVSDAFNYLKF-LSKETQEHMVALYLNSSNHLIAQ 144 Query: 64 ETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGL 123 E + G++N V PR+++ A+ HN ++++HNHP+ + TPS+ D T++L Sbjct: 145 EVIAKGSLNVVRVLPRDILYYAIKHNCNGIIISHNHPNNDPTPSQEDIEFTKKLQTLANE 204 Query: 124 VDIRVPDHLIVGGNQVFSFAEHGLL 148 + + DH+IVG +SFA+ GL+ Sbjct: 205 LGFDLLDHIIVGKKDFYSFAKAGLI 229 >UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacterium RepID=UPI0001BC61BD Length = 227 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 48/128 (37%), Positives = 76/128 (59%) Query: 21 HEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPRE 80 E + ++ + RE+F VL+LN NQL+ E LF G+I+R+ V+PRE Sbjct: 100 EEKNIHIQRKEDLISYVRAQIGFENREKFFVLFLNTANQLLCSEELFQGSIDRSAVYPRE 159 Query: 81 VIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVF 140 ++++ L + A +V+ AHNHPSG PS+ D +T+ + AL + D+ + +H+IV + F Sbjct: 160 ILEKVLKYKAKSVIFAHNHPSGNTQPSRQDIALTKEMKDALRMFDVLLIEHIIVSKHSYF 219 Query: 141 SFAEHGLL 148 SF E GLL Sbjct: 220 SFLEEGLL 227 >UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DS55_9BACT Length = 235 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 56/158 (35%), Positives = 90/158 (56%), Gaps = 11/158 (6%) Query: 1 MTPGERSLIQRALKTLDRHL--HEPGVAFT--STRAAREWLILNMAGLEREEFRVLYLNN 56 + P + + + RA+ L R L E FT +A +LI +AG +EEF +L L+ Sbjct: 77 VGPAKATSL-RAVFALARKLVAEEAMEQFTIHRPESAAPYLIQLLAGKSKEEFHILLLDT 135 Query: 57 QNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITER 116 +N+L+ + G ++R+ VHPREV + AL + A ++LAHNHPSG+ +PS D T+ Sbjct: 136 KNRLMRSSQISIGLLDRSHVHPREVFREALRYGTAKIILAHNHPSGDPSPSPQDIECTKN 195 Query: 117 LVQALGLVDIRVPDHLIVGGN------QVFSFAEHGLL 148 L++A ++ ++V DHLI+G Q S + GL+ Sbjct: 196 LIEAGEILGVKVVDHLIIGHKLPGDSRQFVSLRQLGLV 233 >UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiaceae RepID=Y1761_CHLPD Length = 223 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 57/140 (40%), Positives = 83/140 (59%), Gaps = 3/140 (2%) Query: 12 ALKTLDRHLH---EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFT 68 A+ L++ +H S R E++ + + +E VL+LN +NQ+I E + Sbjct: 83 AVFELNKRIHYSRNLQRKVLSARDVFEYMAGRVPDITKEHLFVLHLNTKNQIIRNEQVTV 142 Query: 69 GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRV 128 GT+N + HPREV K A+ +A A++L HNHPSG+V PS ADR +TE L QA + I + Sbjct: 143 GTLNASLAHPREVFKSAIRESAHAIILVHNHPSGDVEPSNADRQVTEILRQAGSFLQIDL 202 Query: 129 PDHLIVGGNQVFSFAEHGLL 148 DH+I+G + FSF EH LL Sbjct: 203 LDHVIIGVDTWFSFREHSLL 222 >UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Deltaproteobacteria RepID=Q6AQC9_DESPS Length = 249 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 49/137 (35%), Positives = 80/137 (58%), Gaps = 2/137 (1%) Query: 12 ALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTI 71 A + L L S+ E+L M GL++E F V++L++ + +I E + G++ Sbjct: 98 AARYLQLRLEGKSY-LHSSTEVVEYLSYRMRGLKKEVFCVVFLDSSHGIICSEIIAEGSL 156 Query: 72 NRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDH 131 VHPRE++ +AL H+AAA++++HNHPSG + PS D +T L + I++ DH Sbjct: 157 TVNTVHPRELLVKALEHHAAALIISHNHPSGALLPSPQDIQLTRLLYFLCSSMQIQLLDH 216 Query: 132 LIVGGNQVFSFAEHGLL 148 +I+G SFA+HGL+ Sbjct: 217 IIIGDGAY-SFADHGLM 232 >UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BG63_9BACT Length = 232 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 53/135 (39%), Positives = 73/135 (54%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 K + + S++ E + +++ L EEF +LYLN N+L+ L G I + Sbjct: 98 KRFQKQQPDKTTVLNSSKIVYESIYMDLDTLPHEEFWILYLNQSNRLLEKYRLSKGGITQ 157 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 T V R KRA A ++LAHNHPSG +TPS +D IT + A VD+R+ DHLI Sbjct: 158 TTVDLRLAFKRAFEVGATGLILAHNHPSGGLTPSSSDEQITRKFKLAAASVDLRILDHLI 217 Query: 134 VGGNQVFSFAEHGLL 148 V FSFA+ GLL Sbjct: 218 VSKKGYFSFADEGLL 232 >UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magna RepID=Y357_FINM2 Length = 223 Score = 144 bits (365), Expect = 7e-34, Method: Composition-based stats. Identities = 46/130 (35%), Positives = 69/130 (53%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 + L + + E + + E F L L+ +N++I+ E + GTIN+ Sbjct: 89 RRLSLRKAMDSFSLNDPDSVAEIFCNEIGSCDVENFYALLLDTKNRIISKELISKGTINQ 148 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 + VHPREV K A+ A +++L HNHPSG + PS AD +T+RL + LV I+V DH+I Sbjct: 149 SIVHPREVFKSAIKKGANSIILVHNHPSGSLIPSNADIEVTKRLDKVGDLVGIQVLDHII 208 Query: 134 VGGNQVFSFA 143 V N S Sbjct: 209 VSSNDSLSMR 218 >UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHT1_9DELT Length = 260 Score = 144 bits (364), Expect = 9e-34, Method: Composition-based stats. Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 3/140 (2%) Query: 9 IQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFT 68 + R L LD + P R A +L + ERE F ++ L+ + +++ T+ Sbjct: 108 LHRRLDRLDLPMRRP---LRHPREAERFLRSLLGDAEREHFMIIGLDARQRVLLVRTIAV 164 Query: 69 GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRV 128 G++ R EVHPREV + + A +L HNHPSG+ PS+AD +T R+ + I V Sbjct: 165 GSLTRVEVHPREVFRPLVRAGAHTCLLVHNHPSGDARPSEADIELTARMTDIGRFLGIPV 224 Query: 129 PDHLIVGGNQVFSFAEHGLL 148 DH++V N S AE GL+ Sbjct: 225 LDHVVVSANGFVSLAELGLV 244 >UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteobacteria RepID=Y1139_BURP1 Length = 278 Score = 144 bits (364), Expect = 9e-34, Method: Composition-based stats. Identities = 58/151 (38%), Positives = 89/151 (58%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVA---FTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P +++ ++ R L E S A ++L L + RE F L+L+ + Sbjct: 128 IGPARTAILVAVVELARRALAEKARERPLVDSPGAVDDYLRLLIGTRPREVFVCLFLDAR 187 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++L+ E G++ R V+PRE+++RAL NAAA+++AHNHPSG V PS ADR +T L Sbjct: 188 HRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADRRLTRVL 247 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 AL LVDI++ DH +VG + FSFA+ G + Sbjct: 248 RDALALVDIKLIDHFVVGASDTFSFAQAGWI 278 >UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M9C6_CAPOD Length = 225 Score = 144 bits (364), Expect = 9e-34, Method: Composition-based stats. Identities = 52/151 (34%), Positives = 74/151 (49%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHE---PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + I A + R E P + + L EEF VLYLN+ Sbjct: 75 IGQAKAITILAATEMGRRRAAETPEPQPKIEVAHNVFVLMQPLIGELPHEEFWVLYLNST 134 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N++I LF+G I T V R + K AL A A++L HNHPSG TPSK D +T+R+ Sbjct: 135 NRVIHKARLFSGGITHTTVDVRLLFKTALEQGAIALILVHNHPSGSTTPSKEDIELTQRV 194 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A ++DI++ DH+IV + SF + L Sbjct: 195 KTAGEMLDIKLLDHVIVTEKEYLSFLDERLF 225 >UniRef50_Q9LAI3 RadC (Fragment) n=2 Tax=Firmicutes RepID=Q9LAI3_BACSQ Length = 119 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 45/119 (37%), Positives = 74/119 (62%) Query: 30 TRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHN 89 A + + ++R+ F V+ L+ +NQ A G++N + VHPREV+K A+ N Sbjct: 1 PEDAYNLVKCFLVDVDRDYFLVICLDTKNQPTAINICHVGSLNASLVHPREVMKPAILSN 60 Query: 90 AAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A+V++AHNHPS + TPSK D +T+RL++A ++ I + DH++VGGN+ S E + Sbjct: 61 SASVIVAHNHPSLDPTPSKEDINVTKRLIEAGRIMGIDILDHIVVGGNKYVSLKEKRYI 119 >UniRef50_C0GR82 DNA repair protein RadC n=2 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GR82_9DELT Length = 145 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 1/144 (0%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 ER + L L P +S AA L+ + E F VL+++N+N++I + Sbjct: 3 EREKAKTLLDQLYAMESSPDYVLSSPEAAVIQLLP-FRKKKTENFVVLFVDNKNRMICKK 61 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 + GT+++ V PRE+I+ A+ A+ ++L HNHP G PSK DR +T ++ + + Sbjct: 62 VVAKGTVDQIPVFPREIIRHAILKQASGIILGHNHPGGASEPSKQDRELTSKIKRIAMEL 121 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 IRV DH+I+ + FSF E+G L Sbjct: 122 GIRVLDHIIICDSGHFSFQENGYL 145 >UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepID=C4V569_9FIRM Length = 225 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 52/150 (34%), Positives = 76/150 (50%), Gaps = 2/150 (1%) Query: 1 MTPGERSLIQRALKTLDRHLH--EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 + + + + AL+ R L RE F VL L+ +N Sbjct: 76 IGSAKAATVLAALELGRRAYAGTRGMPRMNEAADVAALLSARCQAERREHFFVLPLSAKN 135 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 +++ + TGT+ T VHPREV + A+ +AA +++AHNHPSG+ PS D +T L Sbjct: 136 EVLMIADVSTGTLTNTLVHPREVFEPAIRCSAAHIIIAHNHPSGDPAPSAEDHRLTRSLH 195 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A L+ I V DH+IV + FSFAE GLL Sbjct: 196 EAGALLGIPVADHVIVARDGFFSFAEAGLL 225 >UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=C0R2T1_WOLWR Length = 224 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 45/140 (32%), Positives = 83/140 (59%) Query: 9 IQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFT 68 +++A R + + ++L +++ L +E FRV+Y+N + +LIA + Sbjct: 85 VKQAFVRSAREEIKDLPIIDNWEKLLDYLRISIGSLNKENFRVIYMNKKYRLIAEDLQNI 144 Query: 69 GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRV 128 GT+++T ++ RE+IKRAL + ++V++HNHPS + PS +D +T +L +A + I + Sbjct: 145 GTVDQTPLYVREIIKRALLIGSTSIVISHNHPSRDTQPSNSDISLTRQLAEACQSIGIEL 204 Query: 129 PDHLIVGGNQVFSFAEHGLL 148 DH+I+ + FSF E+ LL Sbjct: 205 IDHIIITFSSYFSFKENRLL 224 >UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C7TC16_LACRG Length = 222 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 43/146 (29%), Positives = 77/146 (52%), Gaps = 3/146 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGV---AFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + +R+ I ++ R + V ++ + ++ AG +E +L+L+ + Sbjct: 70 LGAAKRASILAGVELGRRVMRRQSVRYGQIKNSEQLGKTMVSRFAGANQESMLILFLDVK 129 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 NQ+I + + GT++ PR V + AL +A +++ HNHPSG+ +PS+ADR T R Sbjct: 130 NQIITEQIVAIGTVDSALADPRVVFREALKLSATNLIMVHNHPSGDPSPSQADRDTTTRF 189 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFA 143 A L+ + + DHLI+G +SFA Sbjct: 190 QLAAALLGMHLLDHLIIGRQSYYSFA 215 >UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LCX8_9BACT Length = 228 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVA---FTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + I A + R EP + + + EEF ++LN + Sbjct: 77 IGPAKAITILAACELGRRRAEEPAEQRPLMDGPQKIYSFFRQRLEDTPHEEFHAMFLNRR 136 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 QL++ + G + T V R + +AL A A+ + HNHPSG PS+AD +T+++ Sbjct: 137 LQLVSEALIGRGGLTETTVDVRLLFGKALEAKATALAICHNHPSGNPRPSQADDRLTQKV 196 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 QA L+DIR+ DH+IV +S+ E G L Sbjct: 197 AQAARLLDIRLVDHIIVADKCYYSYQEEGKL 227 >UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=C5TNC6_NEIFL Length = 224 Score = 142 bits (360), Expect = 2e-33, Method: Composition-based stats. Identities = 49/142 (34%), Positives = 78/142 (54%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 ++++ + + + + ++ ++ ++L L++ + E L LN QNQLIA L Sbjct: 83 AVVKEIGRRILGEDLQEQIILSNPKSVADYLRLHLGHEKIEVSVALLLNRQNQLIAVREL 142 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 GT+ V+ RE++K AL A +++LAHNHP PS++D TERL QAL LVDI Sbjct: 143 SRGTVAENTVYIREIVKLALDEYADSLILAHNHPGSSARPSESDVQFTERLKQALSLVDI 202 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 + DH IV + S E G + Sbjct: 203 TLLDHFIVTAKETCSLREQGYM 224 >UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHA4_DESAA Length = 265 Score = 142 bits (360), Expect = 2e-33, Method: Composition-based stats. Identities = 55/155 (35%), Positives = 82/155 (52%), Gaps = 7/155 (4%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGV------AFTSTRAAREWLILNMAGLEREEFRVLYL 54 + P I +HL V A +S+ L + E F ++YL Sbjct: 96 LGPANILGILLMRAVAKKHLESEAVLASLQEAVSSSEELYNLLNFQFENKKNECFFIVYL 155 Query: 55 NNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLIT 114 + QN+++ ET F G++N + V+ RE+I +AL A+AV+LAHNHPSG PSK D +T Sbjct: 156 DVQNRILNMETPFEGSLNASHVYTRELIDKALKTGASAVLLAHNHPSGNTKPSKNDIQLT 215 Query: 115 ERLVQALGLVDIRVPDHLIVGG-NQVFSFAEHGLL 148 L A V+I + +HLI+G + +SFA+HG L Sbjct: 216 YTLFTAFRSVEIHLLEHLIIGKQGEYYSFADHGYL 250 >UniRef50_C0R372 DNA repair protein RadC, putative n=11 Tax=Wolbachia RepID=C0R372_WOLWR Length = 218 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 49/150 (32%), Positives = 87/150 (58%), Gaps = 3/150 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHEP--GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 +T ++I +TL+R L E + E+L +++ ERE ++LYLN + Sbjct: 70 VTDSAVAMIMCVKETLERVLKEKLKSEPIMDLQGIVEYLNVSIGHSERECVKILYLNKRR 129 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 QLI E+ + G + + V+ +E+ ++AL NA +++++HNHP G + PS+ D+ +T+ L Sbjct: 130 QLIGEES-YIGEMEKAPVYIKEITRKALMKNATSIIMSHNHPGGSLEPSEEDQAVTKSLA 188 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A V +++ DH+I+ FSF E+GLL Sbjct: 189 AACSTVSVKLFDHIIITSGGYFSFRENGLL 218 >UniRef50_A5VEU8 DNA repair protein RadC n=4 Tax=Sphingomonadales RepID=A5VEU8_SPHWW Length = 230 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 46/137 (33%), Positives = 80/137 (58%), Gaps = 1/137 (0%) Query: 12 ALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTI 71 AL+ L + + + + +A ++L +MA E RVL+LN++N L+ E + G++ Sbjct: 95 ALRLLRSKVQDRPI-LSDWQALADYLRADMAHRAVERVRVLHLNSKNVLVRDELVSEGSV 153 Query: 72 NRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDH 131 ++ V+ RE+I+RAL +AA+++ HNHPSG+ PS+ D +T L+ A + I + DH Sbjct: 154 DQAAVYVREIIRRALELGSAALIIVHNHPSGDPQPSRQDVELTRELIAAAKPLGIAIHDH 213 Query: 132 LIVGGNQVFSFAEHGLL 148 ++VG S GL+ Sbjct: 214 VVVGTRGQASLRALGLI 230 >UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales RepID=Y894_PORGI Length = 227 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 52/152 (34%), Positives = 84/152 (55%), Gaps = 4/152 (2%) Query: 1 MTPGERSLIQRAL---KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 M P + + A+ + + + T +R A + + L +EE VL LN Sbjct: 76 MGPAKAVTVMAAMELSRRIPSQEMPRRESITDSRMAYRTISPFLTDLPQEEMWVLLLNQS 135 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++I+ E L G ++ T R ++ +A+ H A+A++LAHNHPSG V PS+ D +T+R+ Sbjct: 136 GKIISMENLSRGGVSETSADVRLIMHKAVSHLASAIILAHNHPSGTVRPSEQDIQLTQRV 195 Query: 118 VQALGLVDIRVPDHLIVGGNQ-VFSFAEHGLL 148 +A L+ R+ DHLI+G + FSFA+ GLL Sbjct: 196 QKAATLLGFRLNDHLIIGDDGAYFSFADEGLL 227 >UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria RepID=Y1707_THEEB Length = 250 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 49/147 (33%), Positives = 80/147 (54%), Gaps = 3/147 (2%) Query: 1 MTPGERSLIQRALKTLDRHLH-EPGVA--FTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + + I A++ R PG S A L ++ E F VL L+ + Sbjct: 89 VGPAKATTILAAVELGKRVFQSRPGEQTIIDSPALAAAVLAADLMWQATERFAVLLLDVR 148 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++L+ + GT T HPRE+ + A+ NA+ +++AHNHPSG ++PS+AD +T+++ Sbjct: 149 HRLLGSHVITVGTATETLAHPREIFREAVRRNASRLIIAHNHPSGNLSPSQADLDLTKQI 208 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAE 144 +QA L++I V DHLI+G S E Sbjct: 209 LQAGQLMEIPVLDHLILGNGDYQSLRE 235 >UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYP9_ABIDE Length = 240 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 47/134 (35%), Positives = 75/134 (55%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 + + R H + + + M + E +L L+ + +LI T+ GTIN+ Sbjct: 94 RRIARTRHSYDEPLDTAAKISKRYMEEMRHFKEEHVVLLLLDIKCRLIKELTISIGTINQ 153 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 + + PREV +AL + A +VL HNHPSG+ TPSKAD ++T+++++ LV I + DH+I Sbjct: 154 SFLRPREVFIQALKYEAVNLVLIHNHPSGDPTPSKADIIVTDKILEVSELVGIPLVDHII 213 Query: 134 VGGNQVFSFAEHGL 147 +G SF E GL Sbjct: 214 IGDCCYVSFREKGL 227 >UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae RepID=Y1834_PSYA2 Length = 227 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 53/150 (35%), Positives = 87/150 (58%), Gaps = 3/150 (2%) Query: 1 MTPGERSLIQRALKTLDRHLH---EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + + I +L+ R+L + G ++ ++++ ++ G RE F VL L+N Sbjct: 74 IGPAKYAQILASLEIGRRYLDSQLKTGQGLGRSQMVKDYISTHLRGEPREVFAVLCLDNA 133 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 LI E LFTG I+ V + V++ AL H + +++AHNHP + TPS AD L+T L Sbjct: 134 LNLINFEILFTGGISSCSVCIKHVLRHALSHATSQLIIAHNHPHTDATPSTADNLLTYEL 193 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGL 147 +A L+D+ + DH+IVG N+ S+AE+ L Sbjct: 194 KKACDLIDLSLIDHVIVGRNETLSYAENCL 223 >UniRef50_B5CP31 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B5CP31_9FIRM Length = 168 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 48/128 (37%), Positives = 73/128 (57%), Gaps = 2/128 (1%) Query: 23 PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVI 82 S +A E + ++ +RE F +L + N Q+I + GTIN + V PREV Sbjct: 30 SEQILDSPQAVVELMAKELSQYDREVFCILNMKNNGQVINMNLVSVGTINASLVIPREVF 89 Query: 83 KRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGG--NQVF 140 K ++ NA+A++ HNHPSG V PSK D ++T +L + L+ I + DH+IVGG ++ Sbjct: 90 KSSILANASAIIGLHNHPSGNVKPSKEDMIVTRKLQKCGQLLGIELLDHIIVGGTNGKML 149 Query: 141 SFAEHGLL 148 SF E +L Sbjct: 150 SFREEKML 157 >UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium RepID=C3WLA1_9FUSO Length = 242 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 44/130 (33%), Positives = 75/130 (57%) Query: 19 HLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHP 78 + T A ++L + + E+F V+YL++ N++IA E +GT++R+ ++P Sbjct: 113 KIETKADKITDKEALLKFLRNKIGYEDVEKFYVIYLSSSNEVIAFEESSSGTLDRSSIYP 172 Query: 79 REVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQ 138 RE+ KR + NA ++++AHNHPSG PSK D IT + + L + +H+I+ + Sbjct: 173 REIYKRVIMENAKSIIIAHNHPSGNTCPSKCDIDITNEIAKGLKNFGALLLEHIIITRDS 232 Query: 139 VFSFAEHGLL 148 FSF E GL+ Sbjct: 233 YFSFLEEGLI 242 >UniRef50_D1W0Q6 Putative DNA repair protein RadC n=2 Tax=Prevotella RepID=D1W0Q6_9BACT Length = 259 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 3/149 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVA---FTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + I A + R E +S A E++ M L+ EE +L +N + Sbjct: 108 IGPAKAITILAACELGKRRAMEKAEERADLSSALAIYEYMHPRMQDLDVEEAWILLMNQR 167 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 +LI + G I+ T V R +++ A+ NA + L HNHPS + PS D +T+R+ Sbjct: 168 YKLIKAMRISHGGISETAVDVRVIMREAVLSNATVLALCHNHPSNQAFPSTEDDRLTKRI 227 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 +A L+ I DH+IV + +S+ E G Sbjct: 228 HEASQLMRIYFLDHIIVTDGRYYSYREEG 256 >UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A0L491_MAGSM Length = 241 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 53/124 (42%), Positives = 76/124 (61%) Query: 25 VAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKR 84 R++L+ MAG E F VL L+ Q +L+ + GTI + VHPR+V++ Sbjct: 112 TPLNRADNVRDYLVPLMAGRTEEVFYVLCLDAQCRLLFPALVTEGTIRQAHVHPRQVVEL 171 Query: 85 ALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAE 144 + H AA V+LAHNHPSG S+ D L+T L+QAL +D++V DHLI+ G +VFSFA Sbjct: 172 VIRHKAAHVILAHNHPSGNPKASQDDILLTSHLMQALNPIDVQVLDHLIIAGEKVFSFAS 231 Query: 145 HGLL 148 G++ Sbjct: 232 AGMM 235 >UniRef50_B8KU95 DNA repair protein RadC n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KU95_9GAMM Length = 223 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 58/120 (48%), Positives = 75/120 (62%) Query: 27 FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 S R +L + RE F LYL+++N+LI E LF GTI+ V PREV++ AL Sbjct: 102 IASAVECRRFLQRRLGKQRREVFSALYLDSRNRLIVAEDLFAGTIDGAAVFPREVVRGAL 161 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 H+AA+V++AHNHPSG + PS+ DR +T RL AL LVDIR+ DH IVG S A G Sbjct: 162 LHDAASVIVAHNHPSGALAPSEQDRQLTRRLSSALSLVDIRLLDHFIVGFGDSVSLASLG 221 >UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYN9_9FIRM Length = 230 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 44/123 (35%), Positives = 64/123 (52%) Query: 26 AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRA 85 + A + ++E F + LN +IA E + G + HPREV K A Sbjct: 102 KIGNPEAIFHLFHEKLRYEKKENFYAVMLNTAKHVIAKERISIGGLACAYAHPREVFKSA 161 Query: 86 LYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEH 145 + A++V+L HNHPSG VTPS D LIT+RL+ A ++ I V DH+I+G S + Sbjct: 162 IKKAASSVILVHNHPSGCVTPSDEDVLITKRLINAGRIIGIEVIDHIIIGNENYLSMKKE 221 Query: 146 GLL 148 G + Sbjct: 222 GYI 224 >UniRef50_Q4V1K6 Possible DNA repair protein n=7 Tax=Bacillus cereus group RepID=Q4V1K6_BACCZ Length = 151 Score = 142 bits (358), Expect = 5e-33, Method: Composition-based stats. Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 4/149 (2%) Query: 4 GERSLIQ--RALKTLDRHLHEPGVAFTSTRAAREWLILNMA--GLEREEFRVLYLNNQNQ 59 G+R ++Q + +K ++ T + + E F V LN +N+ Sbjct: 2 GKRIMVQSVKLVKESNKIYDVERKRITCPDDINILARAVLCIDEMPHEVFGVFNLNTKNE 61 Query: 60 LIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQ 119 +I + G+IN + VHPRE + A+ +NAA++V HNHPSG S DR +T+RL + Sbjct: 62 IIGCSIVSQGSINSSVVHPRETFRTAILNNAASIVCFHNHPSGNPDASPEDREVTKRLAE 121 Query: 120 ALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++ I + DH+I+G ++ S E G + Sbjct: 122 CGKILGIELLDHVIIGEHRFVSLREKGCI 150 >UniRef50_Q4EGF4 DNA repair protein RadC n=7 Tax=Bacilli RepID=Q4EGF4_LISMO Length = 147 Score = 141 bits (357), Expect = 5e-33, Method: Composition-based stats. Identities = 50/141 (35%), Positives = 74/141 (52%), Gaps = 1/141 (0%) Query: 9 IQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFT 68 + R + + S + + +RE F V+ LN +N ++A Sbjct: 7 VVRIEQIIREAEEGVDYIIRSPEDGAKIASRFIGRDDREVFFVMCLNTKNNVVAVHRCHV 66 Query: 69 GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRV 128 G++N + VHPREV K A+ +N A+V+LAH HPSG++ PS D +T+RLV+A L+ I V Sbjct: 67 GSLNSSIVHPREVFKSAILNNVASVILAHQHPSGDIKPSMEDINVTKRLVEAGKLLGIEV 126 Query: 129 PDHLIV-GGNQVFSFAEHGLL 148 DHLIV N S E G + Sbjct: 127 LDHLIVNSDNSFTSLKERGYI 147 >UniRef50_D1QST5 DNA repair protein RadC n=13 Tax=Bacteroidales RepID=D1QST5_9BACT Length = 234 Score = 141 bits (357), Expect = 5e-33, Method: Composition-based stats. Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGV---AFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + I A + R E + S++A E+L M L+ EE V+ LN Sbjct: 84 VGPAKAITILAACELGKRRAMEKAEERQSIDSSKAIYEYLHPRMQDLDVEEAWVMLLNQH 143 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 +LI + G I+ T V R ++K AL NA + LAHNHPS PS D +T+R+ Sbjct: 144 YKLIKALRISHGGISETAVDVRIILKEALLCNATVLALAHNHPSNHAQPSGPDDQLTQRV 203 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A + I DH+I+ +S+ + G L Sbjct: 204 KKACEALRIYFLDHVIITDGTYYSYHDSGRL 234 >UniRef50_A8RIH3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RIH3_9CLOT Length = 178 Score = 141 bits (357), Expect = 6e-33, Method: Composition-based stats. Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 1/123 (0%) Query: 27 FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRAL 86 FT A E + +RE VL LN + + A E G +N + R++ K A+ Sbjct: 48 FTDPGMAAEMVWPLFEMADREMALVLSLNTKLEPQALEIAAVGGLNACSIDCRDIFKHAV 107 Query: 87 YHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGN-QVFSFAEH 145 +NAA ++ HNHPSG+ PS DR +T+RL + ++ I + DH+IVG +SF E Sbjct: 108 LNNAAFIICFHNHPSGDPKPSMEDRKLTKRLEECGKILGIPLIDHIIVGEGPCCYSFKEQ 167 Query: 146 GLL 148 G+L Sbjct: 168 GML 170 >UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUS2_DESOH Length = 253 Score = 141 bits (356), Expect = 7e-33, Method: Composition-based stats. Identities = 53/145 (36%), Positives = 85/145 (58%), Gaps = 1/145 (0%) Query: 4 GERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAG 63 G R + A + L++ L + ++ +L + RE F ++++ +N++I Sbjct: 85 GIRLVKAVADRCLEKELVGRPL-LANSTDLLNYLNHTLRDRHRETFAAIFMDAKNRVIVV 143 Query: 64 ETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGL 123 ETL G++ + V+PREV+ RAL H+AAA++ HNHPSGE PS+ D IT +LV A Sbjct: 144 ETLSEGSLTESPVYPREVVARALAHHAAALICCHNHPSGEPEPSRQDIAITRKLVMACKT 203 Query: 124 VDIRVPDHLIVGGNQVFSFAEHGLL 148 + I V +H+IVG FSFA++G + Sbjct: 204 MGITVHEHIIVGERGHFSFADNGYM 228 >UniRef50_C0QCU0 RadC2 n=2 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QCU0_DESAH Length = 187 Score = 140 bits (355), Expect = 8e-33, Method: Composition-based stats. Identities = 52/152 (34%), Positives = 94/152 (61%), Gaps = 6/152 (3%) Query: 3 PGERSL-IQRALKTLDRHLHEPGVAFTSTRAAREWLI--LNMAGL-EREEFRVLYLNNQN 58 P ++ + + R D+ + + + + A++ + + M G +RE+F +L LN +N Sbjct: 28 PSKKFISVYRVSLVRDKGIKFGRESLSGPKQAQKIMKSLIEMQGQPDREQFCILMLNAKN 87 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 ++I + TG+++ VHPREV+K A+ N++A++L HNHPSG +TPS D IT+R++ Sbjct: 88 KIIGLNIVSTGSLSSATVHPREVLKPAILANSSAMILCHNHPSGTLTPSPEDIAITKRII 147 Query: 119 QALGLVDIRVPDHLIVG--GNQVFSFAEHGLL 148 QA ++ I V +HLI+ + +SF+E+GL+ Sbjct: 148 QASDIMGITVHEHLIINMDDDSFYSFSENGLI 179 >UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae RepID=Y1225_NEIG2 Length = 225 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 46/142 (32%), Positives = 76/142 (53%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 ++++ + + + + + ++L ++ + E L LN QNQLIA L Sbjct: 83 AVVREIGRRILEEELQEEITLSDPDTVADYLRFHLGQEKVEVSVALLLNRQNQLIAVREL 142 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 GT+ ++ RE++K AL A ++++AHNHP G PS+ D + T RL QA+ LVD+ Sbjct: 143 SRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDIMFTRRLAQAMSLVDV 202 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 + DH IV V SF + GL+ Sbjct: 203 SLLDHFIVTSQTVRSFRQLGLM 224 >UniRef50_Q93MC6 DNA repair protein RadC n=1 Tax=Clostridium perfringens RepID=Q93MC6_CLOPE Length = 145 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 43/132 (32%), Positives = 72/132 (54%) Query: 17 DRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEV 76 ++ L E + + ++RE V+ L+ +N++ + GT+N + V Sbjct: 14 EQSLQIEKDIIKKPEQVFEVVKNFLGEVDREYLIVIVLDVKNKINSISVASVGTLNSSIV 73 Query: 77 HPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGG 136 HPREV K A+ N A+++LAHNHPSG+ +PSK D IT R+ + L+ I + DH+I+G Sbjct: 74 HPREVFKTAILANGASIILAHNHPSGDTSPSKDDINITTRIKECGVLMGIELLDHVILGD 133 Query: 137 NQVFSFAEHGLL 148 + S G++ Sbjct: 134 EKFISLKNEGII 145 >UniRef50_C7PSZ0 DNA repair protein RadC n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PSZ0_CHIPD Length = 237 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 45/118 (38%), Positives = 62/118 (52%) Query: 31 RAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNA 90 R A + + E F VLYLN+ ++++ + G I T V P+ + + AL A Sbjct: 119 RDAALYFKPLLGDAALESFHVLYLNHASRVLQHRCISIGGITGTIVDPKVIFREALELGA 178 Query: 91 AAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 V+L HNHPSG + PS AD ITE+L A L+DI V DH+IV S E G + Sbjct: 179 TQVILCHNHPSGNLRPSTADIQITEKLKAAGRLLDISVLDHIIVSEAGYCSMVEEGFI 236 >UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QT39_9RHOB Length = 228 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 50/142 (35%), Positives = 78/142 (54%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 S I++ + R +++ M LE E+FR L+LN ++ +IA E + Sbjct: 87 SAIRQCIVRSARAEITERRVLDCWSEVIDYIQATMGYLEIEQFRCLFLNKKHGVIADEVM 146 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 GT++ T V+PRE+++RAL A+A++L HNHPSG+ TPS+ D +T +LV + I Sbjct: 147 QEGTVDHTPVYPRELMRRALILQASALILVHNHPSGDPTPSRPDIEMTAQLVDIAKPLGI 206 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 + DH+IV SF LL Sbjct: 207 EINDHIIVARGLAVSFKGMNLL 228 >UniRef50_Q03EP2 DNA repair protein n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03EP2_PEDPA Length = 219 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 5/150 (3%) Query: 3 PGERSLIQRALKTLDRHLHEP----GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 P ++ ++ R +P G S + + ++ +E VL L+ +N Sbjct: 71 PDATVALEAGIELGRRIQKQPIHLLGKVLGSAQ-LGQMMVSRFQKEPQEHLLVLCLDTKN 129 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 Q+ +F G +N EVHPRE++ L +A + VL HNHPSG + PS D T+++ Sbjct: 130 QIKREIVVFKGGLNSAEVHPREIMVEVLRVSANSFVLIHNHPSGNIEPSTNDLAFTKKMK 189 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + L+ IR+ DHLIVG +S AE + Sbjct: 190 KVGDLMGIRLIDHLIVGDQSYWSAAEKRFI 219 >UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin514 RepID=B9XSW5_9BACT Length = 244 Score = 140 bits (353), Expect = 1e-32, Method: Composition-based stats. Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 6/141 (4%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 + + L G + A + L E E F+V+ LN + +LI E + GT++ Sbjct: 103 RRMAAELKPEGTVLDNPEAIADLLREENRSYEVENFQVVLLNTRRKLIRVENITQGTLDT 162 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 +HPREV K A+ NA+A+VLAHNHPSG+ TPS+AD +T L++A L+ I + DH+I Sbjct: 163 LLIHPREVFKSAISANASAIVLAHNHPSGDPTPSEADIKVTRDLIRAGQLLKIEILDHII 222 Query: 134 VGG------NQVFSFAEHGLL 148 +G S E G Sbjct: 223 LGRRTNERPKDYASLRELGYF 243 >UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B4AA Length = 226 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 42/121 (34%), Positives = 71/121 (58%) Query: 25 VAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKR 84 + + L M+ L +E F ++ L+N N+LIA +TLF G++N + V RE+ + Sbjct: 99 EVYDNPTKVFYHLETKMSHLSQEHFLIMILDNHNRLIAEKTLFIGSVNMSIVSAREIFRE 158 Query: 85 ALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAE 144 AL N +++ HNHPSG+ PS D +T++LV ++++ + DH+I+G NQ +SF Sbjct: 159 ALAFNGVSIICVHNHPSGDAHPSSEDISMTQKLVDLGKMMNVDIVDHIIIGRNQYYSFKA 218 Query: 145 H 145 Sbjct: 219 E 219 >UniRef50_B2KEG6 DNA repair protein RadC n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KEG6_ELUMP Length = 228 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 64/127 (50%) Query: 22 EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREV 81 + + + ++A + E F V+YL +N +I E L G I+R + PR+V Sbjct: 102 KKADIIRTPEDVANYCRASLAEHKDEVFEVIYLTVRNTVIGTEVLSVGAIDRASISPRKV 161 Query: 82 IKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFS 141 ++ AL A +VL HNHPSG+ +PS D T+ + QA ++ I V DH+IV +S Sbjct: 162 VEGALKAKAVGIVLVHNHPSGDPSPSMEDISFTKEVAQAARILGIMVHDHIIVVRGGYYS 221 Query: 142 FAEHGLL 148 + Sbjct: 222 MRAKSQI 228 >UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A4H3_GEMAT Length = 244 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 75/135 (55%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 + + E G+ R + EEF V L+ Q++L + G +N Sbjct: 110 RRMAGEAREAGLPLRGPRDVAAAFAPRLQDAPVEEFHVAILDAQHRLERDVLITRGLLNS 169 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 + VHPREV + A+ AAAV+L HNHPSG+ TPS DR +TE+LV A L+DI V DH+I Sbjct: 170 SLVHPREVFREAIAERAAAVILVHNHPSGDPTPSAEDRAVTEQLVAAGRLLDIPVHDHII 229 Query: 134 VGGNQVFSFAEHGLL 148 VG + SFAE GLL Sbjct: 230 VGRGRYVSFAEAGLL 244 >UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium RepID=Y909_FUSNN Length = 232 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 43/131 (32%), Positives = 78/131 (59%) Query: 18 RHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVH 77 + + + + ++ ++L + E E+F V+YL++ N++I E GT++R+ V+ Sbjct: 102 KLIDKETLKISNKDILLKYLRNKIGYEEIEKFYVIYLSSSNEVIEFEENSVGTLDRSSVY 161 Query: 78 PREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGN 137 PRE+ K+ + NA +++LAHNHPS +TPSK+D +T + + L + +H+I+ N Sbjct: 162 PREIYKKVINLNAKSIILAHNHPSDNITPSKSDIELTNEIAKGLKNFGALLIEHIIITKN 221 Query: 138 QVFSFAEHGLL 148 FSF E GL+ Sbjct: 222 SYFSFLEEGLI 232 >UniRef50_A1BGW3 DNA repair protein RadC n=2 Tax=Chlorobium RepID=A1BGW3_CHLPD Length = 166 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 41/109 (37%), Positives = 67/109 (61%), Gaps = 1/109 (0%) Query: 41 MAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHP 100 + L EE V +L+ +N + + + GT+N + +HPREV + A+ NA A++L HNHP Sbjct: 57 LPDLPHEELHVFFLSTKNYITGTQLVSRGTLNASLIHPREVFRGAILANANAIILVHNHP 116 Query: 101 SGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQ-VFSFAEHGLL 148 SG PS AD+ +T+++ + ++ I + DH+I+G N FSF + GL Sbjct: 117 SGNPEPSNADKQVTKQIRSSADIIGIELLDHVIIGSNGNHFSFRQEGLF 165 >UniRef50_C4ZA49 DNA repair protein RadC n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZA49_EUBR3 Length = 229 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 39/147 (26%), Positives = 81/147 (55%), Gaps = 4/147 (2%) Query: 6 RSLIQRALKTLDRHLHE----PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLI 61 +++ +A+ L + + + + + ++ + M L E Y + +++ + Sbjct: 83 KAIQLKAIAELSLRIAKTKKVQSIRMNNPQTIADYYMEQMRHLTNEVVICAYFDVKSRFL 142 Query: 62 AGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQAL 121 + + G+++ + V +I+ AL NA+ +VL HNHPSG+ TPS+ D +T+RL++ Sbjct: 143 GDKFISKGSLSSSVVDIGSIIRTALDKNASKLVLLHNHPSGDCTPSRNDIAVTDRLIEGS 202 Query: 122 GLVDIRVPDHLIVGGNQVFSFAEHGLL 148 G+ I + DH+I+G N+ +SF E+ L+ Sbjct: 203 GIFSIELCDHIIIGDNEYYSFYENKLI 229 >UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJ65_9BACT Length = 221 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 44/129 (34%), Positives = 77/129 (59%) Query: 20 LHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPR 79 + V A ++L +A ++E F L+L+ +L+ E LF GT++R V+PR Sbjct: 93 IDREAVIIDKPEKAAQFLKYKIAYDKKEHFVALFLDVNKKLLGFENLFKGTVDRLAVYPR 152 Query: 80 EVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQV 139 E+ +RA+ A V++AHNHPSG ++PS+ D +T++L++AL +DI + DH+I+ Sbjct: 153 EIAERAITSKATHVIVAHNHPSGNMSPSETDITLTDKLIKALAALDINLADHIIITTKGF 212 Query: 140 FSFAEHGLL 148 +SF ++ Sbjct: 213 YSFKREQVI 221 >UniRef50_A9BIK5 DNA repair protein RadC n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BIK5_PETMO Length = 222 Score = 139 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 41/137 (29%), Positives = 78/137 (56%), Gaps = 1/137 (0%) Query: 6 RSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGET 65 ++ ++ + + L + TS A +M L E R ++L+++ +I + Sbjct: 78 KAALEIGKRYHLQKLRQKYQKVTSPEEAYHVC-EDMIYLSTETVRAIFLDSKLHIITIKD 136 Query: 66 LFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVD 125 + GT+N + HPR++ + A+ +NA + +L HNHPSG+ TPS DR IT++++ + ++ Sbjct: 137 ISNGTVNMSIAHPRDIFREAIMYNAVSFILVHNHPSGDPTPSMHDRDITKKIMDSGEILG 196 Query: 126 IRVPDHLIVGGNQVFSF 142 I + DH+I+G + FSF Sbjct: 197 INMNDHIIIGKDSYFSF 213 >UniRef50_B5Y6A0 UPF0758 protein COPRO5265_1522 n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=Y1522_COPPD Length = 235 Score = 139 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 4/126 (3%) Query: 27 FTSTRAAREW----LILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVI 82 T+ A E+ + +E F +L L+ +N+ I + G+ +T V P+E++ Sbjct: 110 ITTPEDAIEYAARYFSSMLMNEGKEHFWILLLDRKNRPIKHVEISVGSSIQTTVDPKEIL 169 Query: 83 KRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSF 142 K+ +A A++L HNHPSG+ +PS+ D +T++L QA LV ++ DH+IVG NQ S Sbjct: 170 KQVSLTSAQALILIHNHPSGDPSPSREDVAVTKQLKQACELVGAQLLDHIIVGKNQHVSL 229 Query: 143 AEHGLL 148 A L+ Sbjct: 230 AREKLI 235 >UniRef50_UPI00016C0069 DNA repair protein RadC n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0069 Length = 225 Score = 139 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 4/147 (2%) Query: 6 RSLIQRALKTLDRHLHEPG----VAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLI 61 +++ A+ + + LH P + + + +E F LYL+++ LI Sbjct: 72 KAIQLVAIVEIAKRLHVPKPMQLIDLKNPEDVAGLFVEEFENKFQEMFYALYLDSKLGLI 131 Query: 62 AGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQAL 121 + GT+N T VH R+V + A+ A ++++ HNHPSG+ PSK D IT L Sbjct: 132 KKHCISIGTLNMTIVHARDVFRPAIEVCANSLIVVHNHPSGDPEPSKQDITITRDLQFVG 191 Query: 122 GLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++ I + DH+IVG S + G+L Sbjct: 192 EVIKIPLLDHVIVGDGDFRSLRQMGIL 218 >UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUL4_9BACT Length = 214 Score = 138 bits (349), Expect = 4e-32, Method: Composition-based stats. Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 3/147 (2%) Query: 5 ERSLIQRALKTLDRHLHEPG---VAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLI 61 + IQ A++ R L S+ + ++ EE LYLN N+++ Sbjct: 67 RAARIQAAVELGRRVLAARELGPDPIGSSNDVVRIFRPLLTEMKHEECWCLYLNTGNRIV 126 Query: 62 AGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQAL 121 + + G + T V R VIKRAL A ++L HNHPSG PS+ D+++T+++ +A Sbjct: 127 ERQRVSQGGVQATVVDHRLVIKRALELLATQIILVHNHPSGAALPSEQDKILTKKIAEAA 186 Query: 122 GLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L DIR+ DHLI+ +SF + GLL Sbjct: 187 ALFDIRLLDHLIIARGGEYSFRQSGLL 213 >UniRef50_C8N8A0 DNA repair protein RadC n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N8A0_9GAMM Length = 224 Score = 138 bits (349), Expect = 4e-32, Method: Composition-based stats. Identities = 57/145 (39%), Positives = 84/145 (57%) Query: 2 TPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLI 61 T ++ + A + + + +P +F + R++L++ G E F VL+LN Q+ I Sbjct: 78 TAEILAVTELARRFMREEMRQPSWSFKTAADVRDYLLMQFKGQALEAFGVLFLNQQHGFI 137 Query: 62 AGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQAL 121 A E L G + V R++I AL+H+AAAV+LAHNHP+G PS DR +T L AL Sbjct: 138 AFERLAAGAAAKVPVPVRQLIASALHHHAAAVILAHNHPAGSGAPSAEDRDVTRHLDDAL 197 Query: 122 GLVDIRVPDHLIVGGNQVFSFAEHG 146 L+DIR+ DH IV GN++ S E G Sbjct: 198 ALMDIRLLDHFIVAGNEMVSMRERG 222 >UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcus RepID=Y1084_STRS2 Length = 246 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 45/144 (31%), Positives = 81/144 (56%), Gaps = 4/144 (2%) Query: 6 RSLIQRALKTLDRHLHEPGVAFTS----TRAAREWLILNMAGLEREEFRVLYLNNQNQLI 61 +++ +A+ L + +++ + + +I + ++E LYLN QNQ+I Sbjct: 79 KAIEIKAMIELGKRINQSELLLNERILGSEKLGRKMIHEIGHKKQEHLVALYLNTQNQII 138 Query: 62 AGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQAL 121 + +T+F G++NR+ PRE++ A+ A ++++ HNHPSG V PS+ D L TE L ++ Sbjct: 139 SQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSVQPSRNDLLFTENLKESC 198 Query: 122 GLVDIRVPDHLIVGGNQVFSFAEH 145 + + + DHLIVG +SF E Sbjct: 199 EKLGLVLLDHLIVGNKDYYSFREE 222 >UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5B1_9CHLA Length = 238 Score = 138 bits (348), Expect = 6e-32, Method: Composition-based stats. Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 3/150 (2%) Query: 1 MTPGERSLIQRAL---KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + ++ AL K L R + A + ++ +E F + + + Sbjct: 81 LGTAKAIQLKAALNLGKRLSRTQVSAKFQIRTPLHAYHLVKDDLEKAMQEHFLTILQDVK 140 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 +I T+ GT+ T VHPREV A+ H AA+++L HNHPSG+ TPSK D +T+ L Sbjct: 141 GYVICSPTVALGTLTATVVHPREVFYPAIRHRAASLILVHNHPSGDPTPSKEDLDVTKTL 200 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGL 147 V LV I V DH+I+G ++ S E G Sbjct: 201 VAVGRLVGICVNDHIIIGRDRYVSLREEGF 230 >UniRef50_Q0GNI5 Smu18B n=1 Tax=uncultured organism RepID=Q0GNI5_9ZZZZ Length = 154 Score = 138 bits (348), Expect = 6e-32, Method: Composition-based stats. Identities = 59/146 (40%), Positives = 85/146 (58%) Query: 3 PGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIA 62 P +++ + +R + + S R A L +A E E F V+ LN Q+++IA Sbjct: 9 PAWCRIVRERPEAFEREVLAENLHVRSPRDAVVALAPRLAREEVEVFLVIALNAQHRMIA 68 Query: 63 GETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALG 122 + + G N + VHPREV + A+ AAA+++AHNHPSG+ PS DR +TE+LV A Sbjct: 69 LQEVTRGIQNCSLVHPREVFRIAIAIGAAAIIVAHNHPSGDPAPSADDRAVTEQLVAAGR 128 Query: 123 LVDIRVPDHLIVGGNQVFSFAEHGLL 148 L+D+ V DH+IVG SFAE GLL Sbjct: 129 LLDLPVHDHIIVGAGSYTSFAEAGLL 154 >UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Y1765_PARUW Length = 231 Score = 138 bits (348), Expect = 6e-32, Method: Composition-based stats. Identities = 43/131 (32%), Positives = 71/131 (54%) Query: 18 RHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVH 77 R + + A + + + RE F ++ + + LI E + G++++T VH Sbjct: 99 RQQIKSRYLIEHSSHAYQLVKDELENENREIFMAIFQDTKGYLITYEVISIGSLSQTLVH 158 Query: 78 PREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGN 137 PREV A+ H AA++++ HNHPSG+ PS D +T+ L++ L+ I + DHLI+G N Sbjct: 159 PREVFYSAIRHKAASLIVVHNHPSGDPMPSNQDLKLTQILLEGSRLLGIPLRDHLIIGKN 218 Query: 138 QVFSFAEHGLL 148 SF + LL Sbjct: 219 SYVSFKDQNLL 229 >UniRef50_Q2QJL1 DNA repair protein RadC n=1 Tax=Acetobacter aceti RepID=Q2QJL1_ACEAC Length = 147 Score = 137 bits (347), Expect = 9e-32, Method: Composition-based stats. Identities = 50/141 (35%), Positives = 82/141 (58%) Query: 8 LIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLF 67 L++ + + R + + +L M +RE+ RVL+LN+Q+QL+A + + Sbjct: 7 LVRESGLRIQRARLQHSGILAEQQQLYAYLRAIMGPEKREQVRVLFLNDQHQLLADDIMG 66 Query: 68 TGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIR 127 GT++ T V+PRE++ RAL A +VL HNHPSG+ TPS D ++T ++ A +++I Sbjct: 67 QGTVDHTPVYPREIVARALQLKATLLVLVHNHPSGDPTPSADDVVMTNQICGAAKIMNIH 126 Query: 128 VPDHLIVGGNQVFSFAEHGLL 148 V DH+IV G ++ E G L Sbjct: 127 VWDHIIVAGEKLLCMREAGFL 147 >UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia RepID=Q2GEH3_NEOSM Length = 236 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 49/142 (34%), Positives = 77/142 (54%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 ++ ++K + R S ++ ++L L++ E RVL+LN + LI Sbjct: 95 RTVRESMKAILRKDLTSRTTLKSWKSVVDYLRLSIGNKPVETIRVLFLNKKYTLIREYVQ 154 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 G + T + RE+IK+ L A+A+V+AHNHPSG PS+ D LIT +L + VD+ Sbjct: 155 ELGAADHTPLCMREIIKKCLTCGASAMVIAHNHPSGNPLPSQEDLLITGKLKKICQKVDV 214 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 ++ DH IV + FSF +GLL Sbjct: 215 QLVDHFIVTPHDHFSFVVNGLL 236 >UniRef50_C5NXB5 DNA repair protein RadC homolog n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXB5_9BACL Length = 257 Score = 137 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 42/142 (29%), Positives = 76/142 (53%), Gaps = 3/142 (2%) Query: 5 ERSLIQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLI 61 E+++ A R ++ V S ++ +L ++ L +E F VL ++ + ++I Sbjct: 80 EKAIHILANIEFARRIYATNVLDVKCDSPQSIANYLKSSLENLTQEVFVVLDIDTKGKII 139 Query: 62 AGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQAL 121 +F G+++ + VHPREV K A+ ++A+++V HNHPSG+ TPS D T L++ Sbjct: 140 EKREVFKGSLSMSVVHPREVFKLAIKNSASSIVCVHNHPSGDATPSIEDIKTTINLMEVG 199 Query: 122 GLVDIRVPDHLIVGGNQVFSFA 143 +V I + DH++V S Sbjct: 200 EIVGIEMLDHIVVAKKGYVSIR 221 >UniRef50_Q73P26 DNA repair protein RadC n=2 Tax=Treponema RepID=Q73P26_TREDE Length = 225 Score = 137 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 2/147 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 M + S + A++ R+ + L + A +RE F + LN N++ Sbjct: 75 MGDSKISTVLAAMELGRRYYDNKNRTISHPTDVVPLLQ-HYADRDREHFICVSLNGANEI 133 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 IA + GTINRT VHPREV L AAA++ AHNHPSG + PS D +T+R+ +A Sbjct: 134 IATRVVSVGTINRTIVHPREVYSDPLKDRAAAIIAAHNHPSGNLEPSSEDMELTKRIYEA 193 Query: 121 LGLVDIRVPDHLI-VGGNQVFSFAEHG 146 ++ I++ DH+I V FSF + G Sbjct: 194 GKILGIKLLDHIILVPNGNFFSFVQSG 220 >UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5YDI9_DICT6 Length = 228 Score = 137 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 41/143 (28%), Positives = 75/143 (52%) Query: 6 RSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGET 65 ++ I+ + G + ++ A +M L+ E +Y++ +N+ ++ Sbjct: 86 KASIELGRRIFSEKKSYFGESISNPYDAFLIFKEDMFDLKEEHLFCIYMDIKNKCLSKRL 145 Query: 66 LFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVD 125 + G +N PR++ K AL N+A ++LAHNHPSG++TPS+ D + T+RL++A ++ Sbjct: 146 IAKGDLNIVYASPRDIFKYALQENSAKIILAHNHPSGDLTPSEDDVIFTKRLIEAGKILG 205 Query: 126 IRVPDHLIVGGNQVFSFAEHGLL 148 I V DHLI+ S E + Sbjct: 206 IEVLDHLIIHNEDYLSLKEKNFI 228 >UniRef50_Q47CZ3 DNA repair protein RadC n=2 Tax=Dechloromonas aromatica RCB RepID=Q47CZ3_DECAR Length = 193 Score = 137 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 72/143 (50%), Positives = 95/143 (66%), Gaps = 3/143 (2%) Query: 9 IQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGET 65 + A + L R L E S + R+WL L+ AGL+ E F V+YL+ ++LI E Sbjct: 51 LDVARELLLRDLREQMCDSPVMASPQVLRDWLRLHCAGLQHEVFLVIYLDAHHRLIEAEE 110 Query: 66 LFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVD 125 LF GT+ +T V+PREV+K AL NAAA+ LAHNHPSGE PS+AD L+T+ L AL LVD Sbjct: 111 LFRGTLTQTSVYPREVVKGALTRNAAALALAHNHPSGEAEPSRADELLTQTLKSALSLVD 170 Query: 126 IRVPDHLIVGGNQVFSFAEHGLL 148 +R+ DH IV G++V SFAE GL+ Sbjct: 171 VRIIDHFIVAGDKVVSFAELGLI 193 >UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus lactis RepID=Y1515_LACLM Length = 227 Score = 137 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 45/143 (31%), Positives = 75/143 (52%), Gaps = 7/143 (4%) Query: 6 RSLIQRALKTLDRHLHEPGVAFTSTRAAREW---LILNMAGLEREEFRVLYLNNQNQLIA 62 R++I+ + G +S +E+ L M E+E YL+ QNQ+I Sbjct: 84 RAMIELGKRIQTTTRKRYGQVLSS----KEYGMSLAFEMQNFEQEHLTATYLDGQNQIIE 139 Query: 63 GETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALG 122 +T+F G N PRE++ A+ + + +++AHNHPSG + PS+AD++ T+++ A Sbjct: 140 KKTIFIGAFNHATASPREILYHAVKNLSVGLLVAHNHPSGNLQPSQADKIFTKKIKNACD 199 Query: 123 LVDIRVPDHLIVGGNQVFSFAEH 145 + I DH+IVG +SF E Sbjct: 200 NIGINFIDHIIVGAGNYYSFRER 222 >UniRef50_C1QC41 DNA repair protein n=2 Tax=Brachyspira RepID=C1QC41_9SPIR Length = 227 Score = 137 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 42/118 (35%), Positives = 74/118 (62%) Query: 31 RAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNA 90 R +LI+ + L+ E F ++ L+ + I+ E +F GTI+ ++PR++++++L + Sbjct: 101 RDLINYLIIKLGKLKFETFSIVCLDVNKKFISMEHIFRGTIDSATIYPRDLVEKSLSLGS 160 Query: 91 AAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + V+++HNHPSG PSK D IT L +A +VDI++ DH+I+ N +SF E G+ Sbjct: 161 SYVIVSHNHPSGIAKPSKEDINITNVLYKAFKMVDIKMLDHIIIAANSYYSFREDGMF 218 >UniRef50_C3DWR5 DNA repair protein RadC n=1 Tax=Bacillus thuringiensis serovar sotto str. T04001 RepID=C3DWR5_BACTS Length = 154 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 49/137 (35%), Positives = 76/137 (55%), Gaps = 1/137 (0%) Query: 13 LKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTIN 72 ++ + + P T A E + +RE F V+ LN QN+++A G++N Sbjct: 17 IRQVREEVDIPRKKITGPDTAAEIATYFIGDDDREIFLVMCLNTQNEVVAVHRCHVGSLN 76 Query: 73 RTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHL 132 + VHPR+V K A+ +N+ ++V+AH HPSG V PS AD+ +++RL A L+ I V D L Sbjct: 77 SSVVHPRDVFKSAILNNSFSIVVAHQHPSGMVLPSDADKDVSKRLYDAGKLIGIEVLDSL 136 Query: 133 IVGG-NQVFSFAEHGLL 148 IV + +S E G L Sbjct: 137 IVNDAGRFYSLREKGYL 153 >UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9M0_9BACT Length = 227 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 4/151 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHEPG---VAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + +L+ + ++L + +T +L + + G ++E F VL+LN Q Sbjct: 78 LGEAAVTLLALHKQLCTKYLEQKARDVDVLDNTTKIVNFLRMKLGGGKKETFMVLFLNAQ 137 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N L+ + + GT++R V+ REV+++A+ A AV+LAHNHP+G PS AD +T + Sbjct: 138 NHLLCFDVI-PGTVDRATVYAREVLEKAINTKATAVILAHNHPTGICEPSPADIKLTNTI 196 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 Q L V I + DH+IV + FSFA +L Sbjct: 197 RQVLQPVGILLHDHIIVAPSCYFSFASRRML 227 >UniRef50_B1H050 DNA repair protein RadC n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H050_UNCTG Length = 229 Score = 135 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 77/127 (60%) Query: 22 EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREV 81 + +S + +++LI ++G E+F + LN+ N++ + +GT+N++ + PR++ Sbjct: 103 KEKDRLSSPKNVKDYLISTLSGENIEKFYAILLNSGNRVTDCLEIESGTVNKSLLIPRKI 162 Query: 82 IKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFS 141 + AL AA+VV+AHNHP G + PS+ D T + +AL ++I + DH+I+ N FS Sbjct: 163 AEIALKCRAASVVIAHNHPGGTLKPSQNDINATVAVKKALESIEISLLDHIIISNNNYFS 222 Query: 142 FAEHGLL 148 F E+ L+ Sbjct: 223 FKEYSLI 229 >UniRef50_C7VI58 DNA repair protein RadC n=3 Tax=Bacilli RepID=C7VI58_ENTFA Length = 117 Score = 135 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 49/109 (44%), Positives = 71/109 (65%), Gaps = 1/109 (0%) Query: 41 MAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHP 100 + +RE F V+ LN +N ++A G++N + VHPREV K A+ +NAA+V++AH HP Sbjct: 9 IGRDDREVFFVMCLNTRNNVVAVLRCHVGSLNASLVHPREVFKSAILNNAASVIVAHQHP 68 Query: 101 SGEVTPSKADRLITERLVQALGLVDIRVPDHLIV-GGNQVFSFAEHGLL 148 S ++TPSK D +T+RLV+A L+DI V DHL+V N S E G + Sbjct: 69 SDDITPSKEDINVTKRLVEAGKLLDIEVLDHLVVNSDNGFTSLKERGYI 117 >UniRef50_A8ZTW3 DNA repair protein RadC n=5 Tax=Bacteria RepID=A8ZTW3_DESOH Length = 223 Score = 135 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 1/133 (0%) Query: 13 LKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTIN 72 + + R + G+ LI + A ++E F + +N N++++ + G IN Sbjct: 89 FEFVRRRVKPQGLKIKFPADVLP-LIHHYADRKQEHFLCVSINGANEVMSVRVVSIGLIN 147 Query: 73 RTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHL 132 +T+VHPREV L A+AV++AHNHP G++ PS+ D +T +L A + + DH+ Sbjct: 148 KTQVHPREVFADVLAERASAVIVAHNHPHGDLAPSREDIQVTRQLKDAAQTLGLTFLDHI 207 Query: 133 IVGGNQVFSFAEH 145 I +SFAE Sbjct: 208 IFNTTGYYSFAEQ 220 >UniRef50_A9B8G6 DNA repair protein RadC n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B8G6_HERA2 Length = 204 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 47/125 (37%), Positives = 68/125 (54%) Query: 23 PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVI 82 G T+ L M+ LE+EE RV+ L+ Q +I T+ GT+N ++ Sbjct: 76 TGEPITTPMQVVALLQAEMSHLEQEELRVISLSTQAHIIGMHTVVVGTLNTAYCRMADLF 135 Query: 83 KRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSF 142 + L NAA+V+LAHNHPSG V S D L+T++ +QA L++I + DHLI+G S Sbjct: 136 REPLRRNAASVILAHNHPSGMVWASPEDILLTKQAIQAGQLLEIELLDHLIIGKGGYTSM 195 Query: 143 AEHGL 147 E L Sbjct: 196 RERRL 200 >UniRef50_UPI00016B261F DNA repair protein RadC n=2 Tax=candidate division TM7 RepID=UPI00016B261F Length = 214 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 2/142 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAF-TSTRAAREWLILNMAGLEREEFRVLYLNNQNQ 59 + + +I +L+ R+L + S A E L ++ ++E F L L+ N+ Sbjct: 72 LGEAKIPVIVASLELARRYLLDSDQPIIDSPEKAVELL-SDIRDKKQEYFVCLTLDGANR 130 Query: 60 LIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQ 119 LIA + GT+ + VHPREV A+ AA++++AHNHPSG + S+AD+ +T RL + Sbjct: 131 LIAKRVVTIGTLTASLVHPREVFADAIADRAASIIVAHNHPSGSLEASQADKDVTSRLAE 190 Query: 120 ALGLVDIRVPDHLIVGGNQVFS 141 A L+ I + DH+I+ S Sbjct: 191 AGRLLGITLNDHIIITKTDFVS 212 >UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZ93_ERYRH Length = 235 Score = 135 bits (340), Expect = 5e-31, Method: Composition-based stats. Identities = 47/136 (34%), Positives = 73/136 (53%) Query: 8 LIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLF 67 + L+ + + +S WL L + E+E FRVL+L+ QN LI LF Sbjct: 91 AVHELLRRIVMPFPGEKIKLSSCDRIVRWLNLEIGFEEQELFRVLFLSTQNNLIRYLDLF 150 Query: 68 TGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIR 127 GT +++ VHPR+V + A+ NA+ +VL HNHP G ++ S+AD +T L++ ++ I Sbjct: 151 KGTADKSLVHPRDVFREAVRCNASRIVLVHNHPGGSLSASEADVEVTRALIEVGMMIGIE 210 Query: 128 VPDHLIVGGNQVFSFA 143 V DH+IV S Sbjct: 211 VVDHIIVTSTNSVSLR 226 >UniRef50_Q2FT43 UPF0758 protein Mhun_2739 n=5 Tax=Archaea RepID=Y2739_METHJ Length = 225 Score = 135 bits (340), Expect = 5e-31, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 4/152 (2%) Query: 1 MTPGERSLIQRALKTLDRH---LHEPGVAFTSTRAAREWL-ILNMAGLEREEFRVLYLNN 56 + P + +++ + +R+ + + T + + +++G +E F V LN Sbjct: 74 IGPTKAAVLMACFELANRYGTPAEKERIRITEPDHILKISEVTDLSGKSQEHFLVTTLNG 133 Query: 57 QNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITER 116 +++I T+ G +N + VHPREV A+ AAA++ HNHPSG PS D +T + Sbjct: 134 ASEVICTRTITMGLLNHSLVHPREVFADAITDRAAAIICIHNHPSGNPEPSSEDITVTRQ 193 Query: 117 LVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L +A ++ I + DHLI +V S G L Sbjct: 194 LSEAGKILGISLLDHLIYTKGKVTSLRSLGYL 225 >UniRef50_A8ZYJ4 DNA repair protein RadC n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYJ4_DESOH Length = 167 Score = 135 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 47/127 (37%), Positives = 78/127 (61%), Gaps = 2/127 (1%) Query: 23 PGVAFTSTRAAREWLILNMA-GLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREV 81 G +S + + A + E LYL+ +N+++A E +FTG+++ T V+PRE+ Sbjct: 25 RGQEISSAQEVYNIMKPVFAETDDVETLYCLYLDTKNRILAMEKMFTGSLSSTAVYPREI 84 Query: 82 IKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFS 141 IKR + ++AVV+ HNHP+G+ PS D IT RL+ AL +++ + DH+IVG +S Sbjct: 85 IKRVIALKSSAVVITHNHPTGDPGPSVEDTRITIRLLVALKSMNVDLHDHIIVG-EGYYS 143 Query: 142 FAEHGLL 148 FA+ G++ Sbjct: 144 FADAGVI 150 >UniRef50_A6DQ92 DNA repair protein RadC n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DQ92_9BACT Length = 169 Score = 134 bits (339), Expect = 7e-31, Method: Composition-based stats. Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 7/133 (5%) Query: 23 PGVAFTSTRAAREWLI-LNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREV 81 V A ++L + +A +E F VL LN +N + + G ++RT V REV Sbjct: 29 KPVQANQPEAVFDFLKTIGVADEAQEVFIVLVLNTKNFITGYCEVSRGLVDRTHVACREV 88 Query: 82 IKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVG------ 135 + AL + A+ +++ HNHPSG +TPS DR IT L +A L+ + V DHLIVG Sbjct: 89 FRPALINGASKIIVVHNHPSGVLTPSHQDRTITNNLQEAGELLGVEVIDHLIVGYCLNKQ 148 Query: 136 GNQVFSFAEHGLL 148 + SF + G + Sbjct: 149 KHHFLSFRQEGFM 161 >UniRef50_Q2IG79 DNA repair protein RadC n=8 Tax=Anaeromyxobacter RepID=Q2IG79_ANADE Length = 235 Score = 134 bits (339), Expect = 7e-31, Method: Composition-based stats. Identities = 44/125 (35%), Positives = 64/125 (51%), Gaps = 1/125 (0%) Query: 22 EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREV 81 G R E L + A ERE F V+ L+ + +L+ + G++++ V PR+ Sbjct: 108 RRGERCLDPRTVHELLR-HAAHAEREGFHVVLLDVRGRLLRAVQVAEGSLSQCPVSPRDA 166 Query: 82 IKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFS 141 ++ A+ A VV HNHPSG+ TPS D +T RL A LV + DH+IV +S Sbjct: 167 LRPAVREGAHGVVFVHNHPSGDPTPSPDDVDLTARLRAAADLVGVLARDHVIVAAGGYYS 226 Query: 142 FAEHG 146 F E G Sbjct: 227 FVEAG 231 >UniRef50_A6L552 DNA repair protein n=5 Tax=Bacteroidales RepID=A6L552_BACV8 Length = 153 Score = 134 bits (338), Expect = 9e-31, Method: Composition-based stats. Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 3/139 (2%) Query: 13 LKTLDRHLHEPGVAFTSTRAAREWLILNMAGLE---REEFRVLYLNNQNQLIAGETLFTG 69 ++ + + S+ A ++L+ +E F+VL+LN +Q++ + G Sbjct: 15 VELTYKSTSKSRNKIYSSEDAYKYLLPTYKEGTICYKEYFKVLFLNQSSQVLGYTLISEG 74 Query: 70 TINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVP 129 I T V R +++ AL N+ A++LAHNHPSG + PS+ D IT+++ A L+ I V Sbjct: 75 GITDTTVDVRVILQAALLTNSVALILAHNHPSGNLKPSRQDMEITKQVKNAAQLMRITVI 134 Query: 130 DHLIVGGNQVFSFAEHGLL 148 DHLI+ +SFA+ G L Sbjct: 135 DHLILTDAGYYSFADEGQL 153 >UniRef50_B0G8S0 Putative uncharacterized protein n=5 Tax=Firmicutes RepID=B0G8S0_9FIRM Length = 860 Score = 134 bits (338), Expect = 9e-31, Method: Composition-based stats. Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 1/138 (0%) Query: 10 QRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTG 69 Q A++ +++ + A + ++ ++RE F ++ L I + G Sbjct: 7 QVAIRMVEQPPLYSNEPMNNPDVAIRVMNEFLSQMDRELFCIVNLQADLTPINMNIVSVG 66 Query: 70 TINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVP 129 ++N ++PRE+ K A+ NA +++L HNHPSG +TPS +D T R+ + L+ I + Sbjct: 67 SLNEALINPREIFKSAILSNAHSMMLIHNHPSGNLTPSTSDIQTTARMQELGELMGISLV 126 Query: 130 DHLIVGGNQ-VFSFAEHG 146 DH+I G N +SF + G Sbjct: 127 DHIITGRNGNYYSFRDKG 144 >UniRef50_B9L1S0 DNA repair protein radC homolog n=4 Tax=Bacteria RepID=B9L1S0_THERP Length = 261 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 45/134 (33%), Positives = 70/134 (52%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 + L E + MA LE+E+ RV+ L+ +N+++ T+ G +N Sbjct: 123 RRLALAQPEERPVIRTPEDVYAIAGAEMATLEQEQLRVVLLDTRNRVVRTVTVAQGHVNG 182 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 +V E+ + A+ N A+VL HNHPSG+ TPS+ D +TE V+A L+ I V DHL+ Sbjct: 183 AQVRIAELFREAIRANTPALVLLHNHPSGDPTPSRQDIELTESAVEAGTLLGIEVVDHLV 242 Query: 134 VGGNQVFSFAEHGL 147 +G + S GL Sbjct: 243 IGHGRFCSLRRLGL 256 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriacea... 187 7e-47 UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellacea... 187 7e-47 UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobact... 186 2e-46 UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria ... 185 4e-46 UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriace... 185 5e-46 UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteri... 184 5e-46 UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus... 184 8e-46 UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteoba... 184 1e-45 UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 181 6e-45 UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicu... 181 7e-45 UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriace... 181 9e-45 UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonad... 179 2e-44 UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriacea... 179 2e-44 UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio y... 179 2e-44 UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibac... 178 4e-44 UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacter... 178 4e-44 UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97... 178 5e-44 UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax... 177 7e-44 UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria ... 177 7e-44 UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferr... 177 8e-44 UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID... 177 1e-43 UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriace... 177 1e-43 UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcin... 177 1e-43 UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcu... 176 2e-43 UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria ... 176 2e-43 UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID... 176 2e-43 UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium v... 176 2e-43 UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular orga... 176 2e-43 UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepI... 176 3e-43 UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacter... 175 3e-43 UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia... 175 3e-43 UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium ... 175 3e-43 UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadal... 175 4e-43 UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus mar... 174 6e-43 UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobact... 174 7e-43 UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria ... 174 8e-43 UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales Re... 174 8e-43 UniRef50_A1TJG0 DNA repair protein RadC n=1 Tax=Acidovorax citru... 174 1e-42 UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida... 173 1e-42 UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacte... 173 2e-42 UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. ... 173 2e-42 UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 173 2e-42 UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular orga... 173 2e-42 UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobac... 172 2e-42 UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiace... 172 2e-42 UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomon... 171 5e-42 UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovib... 171 6e-42 UniRef50_C5D8D2 DNA repair protein RadC n=4 Tax=Firmicutes RepID... 171 6e-42 UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax... 171 7e-42 UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaprot... 171 8e-42 UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrue... 171 8e-42 UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacte... 170 1e-41 UniRef50_Q2S042 UPF0758 protein SRU_2338 n=1 Tax=Salinibacter ru... 170 1e-41 UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococ... 170 1e-41 UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacte... 170 1e-41 UniRef50_D2NHT0 Putative phage DNA repair protein n=1 Tax=Escher... 170 1e-41 UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonel... 170 1e-41 UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria R... 170 2e-41 UniRef50_B9ECC3 Putative uncharacterized protein n=1 Tax=Macroco... 170 2e-41 UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KC... 169 2e-41 UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria Rep... 169 2e-41 UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus Rep... 169 2e-41 UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobact... 169 3e-41 UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis ex... 169 3e-41 UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditroph... 169 3e-41 UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobac... 168 4e-41 UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepI... 168 4e-41 UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp... 168 5e-41 UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes Re... 167 7e-41 UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerof... 167 1e-40 UniRef50_B1HKP9 DNA repair protein n=1 Tax=Burkholderia pseudoma... 167 1e-40 UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobac... 167 1e-40 UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus s... 167 1e-40 UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales... 166 1e-40 UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacte... 166 1e-40 UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales Re... 166 1e-40 UniRef50_A3ER13 DNA repair protein (RadC) n=3 Tax=Leptospirillum... 166 2e-40 UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=... 166 2e-40 UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Pep... 166 2e-40 UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium Re... 166 3e-40 UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacte... 166 3e-40 UniRef50_A7HJG0 DNA repair protein RadC n=3 Tax=Thermotogaceae R... 166 3e-40 UniRef50_C4Z083 DNA repair protein RadC n=1 Tax=Eubacterium elig... 166 3e-40 UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia ... 166 3e-40 UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes... 166 3e-40 UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae... 165 3e-40 UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius t... 165 3e-40 UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocyto... 165 5e-40 UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobact... 164 6e-40 UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostri... 164 6e-40 UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organis... 164 6e-40 UniRef50_C9LLN8 DNA repair protein RadC n=1 Tax=Dialister invisu... 164 6e-40 UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. ... 164 7e-40 UniRef50_B5V5B9 RadC n=5 Tax=Firmicutes RepID=B5V5B9_BACCE 164 7e-40 UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostri... 164 1e-39 UniRef50_Q3AF80 UPF0758 protein CHY_0341 n=1 Tax=Carboxydothermu... 164 1e-39 UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KC... 164 1e-39 UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y... 164 1e-39 UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris... 164 1e-39 UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillu... 164 1e-39 UniRef50_B0RXB0 DNA repair protein radC homolog n=3 Tax=Xanthomo... 164 1e-39 UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio ae... 164 1e-39 UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga o... 163 1e-39 UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus ... 163 1e-39 UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM... 163 2e-39 UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muci... 163 2e-39 UniRef50_B7ANR2 Putative uncharacterized protein n=1 Tax=Bactero... 163 2e-39 UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q... 162 2e-39 UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q... 162 3e-39 UniRef50_A6Q5Q5 DNA repair protein RadC n=2 Tax=unclassified Eps... 162 3e-39 UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdema... 162 3e-39 UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacte... 162 3e-39 UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magn... 162 3e-39 UniRef50_C0GE80 DNA repair protein RadC n=1 Tax=Dethiobacter alk... 162 4e-39 UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobact... 162 4e-39 UniRef50_B1JAY7 DNA repair protein RadC n=4 Tax=Pseudomonas RepI... 162 4e-39 UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus je... 162 4e-39 UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon ... 161 5e-39 UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio sa... 161 5e-39 UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tanne... 161 6e-39 UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter ox... 161 7e-39 UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID... 161 7e-39 UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae R... 161 7e-39 UniRef50_D1QST5 DNA repair protein RadC n=13 Tax=Bacteroidales R... 161 9e-39 UniRef50_C7GE95 DNA repair protein RadC n=2 Tax=Roseburia RepID=... 161 9e-39 UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saph... 160 1e-38 UniRef50_B1I0K4 DNA repair protein radC-like protein n=1 Tax=Lys... 160 1e-38 UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica... 160 1e-38 UniRef50_D1W0Q6 Putative DNA repair protein RadC n=2 Tax=Prevote... 160 1e-38 UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepI... 160 1e-38 UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiac... 160 1e-38 UniRef50_C6E4Z0 DNA repair protein RadC n=3 Tax=Geobacter RepID=... 160 2e-38 UniRef50_C4SWK5 DNA repair protein n=1 Tax=Yersinia intermedia A... 160 2e-38 UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Ha... 160 2e-38 UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma pro... 159 2e-38 UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrional... 159 2e-38 UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepI... 159 2e-38 UniRef50_Q5DY97 DNA repair protein RadC n=17 Tax=Proteobacteria ... 159 2e-38 UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacte... 159 2e-38 UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C... 159 2e-38 UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivib... 159 2e-38 UniRef50_A9IEU5 Putative DNA repair protein n=1 Tax=Bordetella p... 159 2e-38 UniRef50_C3WF45 Putative uncharacterized protein n=1 Tax=Fusobac... 159 2e-38 UniRef50_A8YUM9 DNA repair protein RadC n=9 Tax=Lactobacillus Re... 159 3e-38 UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronosp... 159 3e-38 UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=... 159 3e-38 UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes Re... 159 4e-38 UniRef50_Q03R16 DNA repair protein n=1 Tax=Lactobacillus brevis ... 159 4e-38 UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales Re... 158 5e-38 UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepI... 158 6e-38 UniRef50_C2KVW9 Possible DNA repair protein RadC n=1 Tax=Oribact... 157 7e-38 UniRef50_C9NPT2 DNA repair protein RadC n=1 Tax=Vibrio coralliil... 157 7e-38 UniRef50_A1B298 DNA repair protein RadC n=7 Tax=Bacteria RepID=A... 157 8e-38 UniRef50_Q02HM7 Putative uncharacterized protein n=1 Tax=Pseudom... 157 8e-38 UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID... 157 9e-38 UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanth... 157 9e-38 UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter past... 157 1e-37 UniRef50_B3JIE2 Putative uncharacterized protein n=10 Tax=Bacter... 157 1e-37 UniRef50_Q4QPE3 Putative DNA repair radC-like protein n=5 Tax=Ha... 157 1e-37 UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria R... 157 1e-37 UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales R... 157 1e-37 UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachl... 157 1e-37 UniRef50_C8PDJ9 DNA repair protein RadC n=1 Tax=Lactobacillus in... 157 1e-37 UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Esch... 157 1e-37 UniRef50_A9I305 DNA repair protein radC homolog n=3 Tax=Proteoba... 156 2e-37 UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales R... 156 2e-37 UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilact... 156 2e-37 UniRef50_C7PSZ0 DNA repair protein RadC n=1 Tax=Chitinophaga pin... 156 2e-37 UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus Rep... 156 2e-37 UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus ... 156 3e-37 UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridi... 156 3e-37 UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera ara... 156 3e-37 UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21... 155 3e-37 UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleid... 155 5e-37 UniRef50_Q6TFX1 ORF25 n=3 Tax=Enterobacteriaceae RepID=Q6TFX1_ERWAM 154 6e-37 UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax... 154 6e-37 UniRef50_Q3A6E7 DNA repair protein, RadC-like n=3 Tax=Desulfurom... 154 7e-37 UniRef50_O67541 UPF0758 protein aq_1610 n=2 Tax=Aquificaceae Rep... 154 7e-37 UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protoc... 154 7e-37 UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillu... 154 8e-37 UniRef50_Q2FT43 UPF0758 protein Mhun_2739 n=5 Tax=Archaea RepID=... 154 1e-36 UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepI... 154 1e-36 UniRef50_A7V531 Putative uncharacterized protein n=1 Tax=Bactero... 154 1e-36 UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin5... 153 1e-36 UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexan... 153 2e-36 UniRef50_Q9LAI3 RadC (Fragment) n=2 Tax=Firmicutes RepID=Q9LAI3_... 153 2e-36 UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium Re... 152 2e-36 UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacte... 152 2e-36 UniRef50_Q4EGF4 DNA repair protein RadC n=7 Tax=Bacilli RepID=Q4... 152 2e-36 UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID... 152 3e-36 UniRef50_C6VI64 DNA repair protein n=3 Tax=Lactobacillus plantar... 152 3e-36 UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vade... 152 3e-36 UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae... 152 3e-36 UniRef50_Q0FHF8 DNA repair protein RadC n=1 Tax=Roseovarius sp. ... 152 3e-36 UniRef50_B5CP31 Putative uncharacterized protein n=2 Tax=Clostri... 152 4e-36 UniRef50_B0MF12 Putative uncharacterized protein n=3 Tax=Clostri... 152 4e-36 UniRef50_Q03EP2 DNA repair protein n=1 Tax=Pediococcus pentosace... 152 4e-36 UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistip... 152 4e-36 UniRef50_UPI00016C0069 DNA repair protein RadC n=1 Tax=Epulopisc... 152 4e-36 UniRef50_Q4V1K6 Possible DNA repair protein n=7 Tax=Bacillus cer... 152 4e-36 UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5... 151 6e-36 UniRef50_Q73P26 DNA repair protein RadC n=2 Tax=Treponema RepID=... 151 6e-36 UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Delta... 151 7e-36 UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria ba... 151 7e-36 UniRef50_A5VEU8 DNA repair protein RadC n=4 Tax=Sphingomonadales... 151 7e-36 UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotro... 151 7e-36 UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteob... 151 8e-36 UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=... 151 8e-36 UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium Re... 151 8e-36 UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae ... 151 1e-35 UniRef50_B2KEG6 DNA repair protein RadC n=1 Tax=Elusimicrobium m... 150 1e-35 UniRef50_C3DWR5 DNA repair protein RadC n=1 Tax=Bacillus thuring... 150 2e-35 UniRef50_C0R372 DNA repair protein RadC, putative n=11 Tax=Wolba... 150 2e-35 UniRef50_C0QCU0 RadC2 n=2 Tax=Desulfobacterium autotrophicum HRM... 150 2e-35 UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio ac... 149 2e-35 UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus ol... 149 2e-35 UniRef50_C4ZA49 DNA repair protein RadC n=1 Tax=Eubacterium rect... 149 2e-35 UniRef50_B0G8S0 Putative uncharacterized protein n=5 Tax=Firmicu... 149 3e-35 UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteri... 149 3e-35 UniRef50_C2MB02 DNA repair protein RadC n=1 Tax=Porphyromonas ue... 149 3e-35 UniRef50_Q93MC6 DNA repair protein RadC n=1 Tax=Clostridium perf... 149 4e-35 UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix r... 148 4e-35 UniRef50_UPI00016B261F DNA repair protein RadC n=2 Tax=candidate... 148 4e-35 UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae ... 148 5e-35 UniRef50_B9L1S0 DNA repair protein radC homolog n=4 Tax=Bacteria... 147 7e-35 UniRef50_B8KU95 DNA repair protein RadC n=1 Tax=gamma proteobact... 147 9e-35 UniRef50_A9BIK5 DNA repair protein RadC n=1 Tax=Petrotoga mobili... 147 1e-34 UniRef50_A6L552 DNA repair protein n=5 Tax=Bacteroidales RepID=A... 147 1e-34 UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aur... 147 1e-34 UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pac... 146 1e-34 UniRef50_C5NXB5 DNA repair protein RadC homolog n=1 Tax=Gemella ... 146 2e-34 UniRef50_C0GR82 DNA repair protein RadC n=2 Tax=Desulfonatronosp... 146 2e-34 UniRef50_A9B8G6 DNA repair protein RadC n=1 Tax=Herpetosiphon au... 146 3e-34 UniRef50_A9NF52 DNA repair protein n=1 Tax=Acholeplasma laidlawi... 146 3e-34 UniRef50_B5Y6A0 UPF0758 protein COPRO5265_1522 n=1 Tax=Coprother... 145 3e-34 UniRef50_Q2QJL1 DNA repair protein RadC n=1 Tax=Acetobacter acet... 145 4e-34 UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcu... 145 4e-34 UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A... 145 5e-34 UniRef50_C7GIB3 DNA repair protein RadC n=9 Tax=Bacteria RepID=C... 145 5e-34 UniRef50_Q0GNI5 Smu18B n=1 Tax=uncultured organism RepID=Q0GNI5_... 145 5e-34 UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus la... 145 5e-34 UniRef50_A8RIH3 Putative uncharacterized protein n=2 Tax=Clostri... 144 6e-34 UniRef50_D1PFM8 DNA repair protein RadC n=1 Tax=Prevotella copri... 144 6e-34 UniRef50_UPI0001BC305A putative DNA primase n=1 Tax=Butyrivibrio... 144 1e-33 UniRef50_A8ZYJ4 DNA repair protein RadC n=1 Tax=Desulfococcus ol... 144 1e-33 UniRef50_C7VI58 DNA repair protein RadC n=3 Tax=Bacilli RepID=C7... 143 1e-33 UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia Re... 143 2e-33 UniRef50_A1BGW3 DNA repair protein RadC n=2 Tax=Chlorobium RepID... 143 2e-33 UniRef50_B6AT60 DNA repair protein RadC n=1 Tax=Rhodobacterales ... 142 4e-33 UniRef50_C4G572 Putative uncharacterized protein n=1 Tax=Abiotro... 141 5e-33 Sequences not found previously or not previously below threshold: >UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriaceae RepID=YFJY_ECOLI Length = 160 Score = 187 bits (477), Expect = 7e-47, Method: Composition-based stats. Identities = 109/143 (76%), Positives = 125/143 (87%) Query: 6 RSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGET 65 + ++RAL LDRHL E GVAFTST+AAR+WL L MAGLEREEF +LYLN QNQLIA ET Sbjct: 18 QRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHET 77 Query: 66 LFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVD 125 LF G+I+ TEVHPREV+KRALY NAAAV+LAHNHPSG+ TPS+AD+ IT+RLVQAL LVD Sbjct: 78 LFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVD 137 Query: 126 IRVPDHLIVGGNQVFSFAEHGLL 148 IRVPDHLIVGG Q++SFAEHGLL Sbjct: 138 IRVPDHLIVGGRQIYSFAEHGLL 160 >UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellaceae RepID=Y009_HAES2 Length = 222 Score = 187 bits (477), Expect = 7e-47, Method: Composition-based stats. Identities = 67/151 (44%), Positives = 93/151 (61%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + +Q + R+L + FTS R +L + +RE F VL+L+NQ Sbjct: 72 LGITQFVQLQACTEMTKRYLLQELQFAQEFTSPDTVRMYLQTELENKDREIFMVLFLDNQ 131 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++LI E +F GTIN+ V+PRE+IK AL+ NAAA++LAHNHPSG TPS ADR +TE + Sbjct: 132 HRLIKKEEMFLGTINQANVYPREIIKTALFCNAAALILAHNHPSGVSTPSMADRKMTENI 191 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 Q L++IRV DH I+G FSFAE G + Sbjct: 192 KQLSELMEIRVLDHFIIGKGNYFSFAEQGWI 222 >UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobacteriaceae RepID=C8U0Q3_ECO10 Length = 180 Score = 186 bits (472), Expect = 2e-46, Method: Composition-based stats. Identities = 84/148 (56%), Positives = 112/148 (75%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 +TP + I+RA+ LD++L +PG+AFTS+ AAR+WL L++A ERE F VLYL+NQ++L Sbjct: 33 LTPYAQRTIRRAMNLLDKYLRQPGIAFTSSTAARDWLRLHLARQEREVFMVLYLDNQHRL 92 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 + ETLF G++N +VH REV+K AL NAAAVVLAHNHPSG+ PS+ DR IT RL +A Sbjct: 93 LESETLFAGSVNHVQVHSREVVKSALRFNAAAVVLAHNHPSGDPEPSQCDRNITGRLKEA 152 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L LVD++ DHL+VG + + SFAE G L Sbjct: 153 LELVDVKTLDHLVVGRDGIVSFAERGWL 180 >UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria RepID=A6SWN0_JANMA Length = 190 Score = 185 bits (470), Expect = 4e-46, Method: Composition-based stats. Identities = 64/148 (43%), Positives = 102/148 (68%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 +T + ++ RA++ LD H+ + G TS + +++L L + +RE F V++++ Q+++ Sbjct: 42 LTAVDTWIVHRAIEILDEHVIKHGPKLTSPKDVKDYLRLQLLNEKREVFAVVFMDTQHRV 101 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 +A E LF GTI++T V+PR +++RA+ NAA+++LAHNHPSG PS+AD+ +T RL Sbjct: 102 LAYEPLFFGTIHQTSVYPRAIVQRAMSLNAASMILAHNHPSGSTHPSEADKQLTNRLKSL 161 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L +D+RV DH I+G FSFAEHGLL Sbjct: 162 LESIDVRVLDHFIIGEEGTFSFAEHGLL 189 >UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B1IPT7_ECOLC Length = 159 Score = 185 bits (470), Expect = 5e-46, Method: Composition-based stats. Identities = 86/148 (58%), Positives = 113/148 (76%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 + P ++ +++AL L+ L E G +FTS+ A R+WL L +A LEREEF L+L+NQ++L Sbjct: 12 LAPADQQTVRKALSLLECQLRETGASFTSSHAVRDWLRLQLASLEREEFTALFLDNQHRL 71 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 IA ETLFTGTIN T+VHPREV+K L HN AAV++AH+HPSGE PSKADR +T R+ QA Sbjct: 72 IAHETLFTGTINHTQVHPREVVKAGLKHNCAAVIVAHSHPSGEAEPSKADRQVTTRIQQA 131 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L LVDIR+ DHL+VGG ++ SFA+ G L Sbjct: 132 LDLVDIRLLDHLVVGGMEITSFADRGWL 159 >UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteria RepID=Y399_STRMK Length = 234 Score = 184 bits (469), Expect = 5e-46, Method: Composition-based stats. Identities = 71/152 (46%), Positives = 95/152 (62%), Gaps = 4/152 (2%) Query: 1 MTPGERSLIQRALKTLDRHLH---EPGVAF-TSTRAAREWLILNMAGLEREEFRVLYLNN 56 + P + L+ R+L E G A + A +L + G RE F L+L+N Sbjct: 74 LGPARSCTLAAGLELAHRYLAAELEHGEAVGNNPAAVGRYLQHRLRGQAREVFMALFLDN 133 Query: 57 QNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITER 116 +++LIA E LF GTIN V+PREV++RAL HNAAAV+L+HNHPSG+ PS AD IT+ Sbjct: 134 RHRLIACEELFHGTINAAPVYPREVVRRALLHNAAAVILSHNHPSGDPEPSSADTRITDE 193 Query: 117 LVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L QAL +VD+R+ DH +VG + SFAE GLL Sbjct: 194 LQQALAMVDVRLLDHFVVGEGRPVSFAERGLL 225 >UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WXL6_ALIAD Length = 233 Score = 184 bits (468), Expect = 8e-46, Method: Composition-based stats. Identities = 44/151 (29%), Positives = 87/151 (57%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + I A++ R +P + A ++++ + L++E F L L+ + Sbjct: 79 IGPAKAVQIAAAVELGRRVARKPPGEKRQIRTAEDAAKYVMDRLRYLKKEHFVTLLLDTK 138 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++++A +T G+++ + VHPRE+ +RA+ +A++++ HNHPSG+ +PS D +T+RL Sbjct: 139 HRVLAEDTSSVGSLDASIVHPREIFRRAIRISASSILCIHNHPSGDPSPSPEDIAVTKRL 198 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 V+A ++ I V DH+++G + S G L Sbjct: 199 VEAGRVLGIEVLDHIVIGDGRFVSLRAEGYL 229 >UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteobacteria RepID=Y2304_PARDP Length = 263 Score = 184 bits (467), Expect = 1e-45, Method: Composition-based stats. Identities = 62/151 (41%), Positives = 91/151 (60%), Gaps = 3/151 (1%) Query: 1 MTPG---ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P E +++ A + L R TS A ++ MA E E+FRVLYL+ + Sbjct: 113 LGPAVLQELKIVEAAAQRLARSRVMHRPVLTSWDALLDYCHTAMAHGEIEQFRVLYLDRK 172 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N LIA E GT++ V+PRE+++RAL +A+A++L HNHPSG+ TPS+AD +T R+ Sbjct: 173 NVLIADEEQARGTVDHVPVYPREIMRRALELSASALILVHNHPSGDPTPSQADIGMTNRI 232 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 V A ++ I V DHLI+G ++ SF GLL Sbjct: 233 VAAAEVMGIAVHDHLIIGRSRELSFRSEGLL 263 >UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVH2_DESAS Length = 227 Score = 181 bits (460), Expect = 6e-45, Method: Composition-based stats. Identities = 51/151 (33%), Positives = 86/151 (56%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPG---VAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + ++ A++ R + + A +++ M ++RE F+ L LN + Sbjct: 77 VGNSKALALKAAVEIGQRIAKTKAMECPSVKTPDDAVNYVMEEMRYMDREHFKALLLNTK 136 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N++I+ E + GT+N + VHPRE+ K A+ +AAA++L HNHPSG+ TPS+ D +TERL Sbjct: 137 NRVISLEAISVGTLNSSNVHPRELFKVAIKRSAAAIILIHNHPSGDPTPSREDIDVTERL 196 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A +V I V DH+++G + S GL Sbjct: 197 GEAGKIVGIDVLDHIVIGDGKFVSLKAKGLF 227 >UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicutes RepID=Y4299_BACWK Length = 225 Score = 181 bits (459), Expect = 7e-45, Method: Composition-based stats. Identities = 51/151 (33%), Positives = 85/151 (56%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLH---EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + S + A + R + + + S +++ M L++E F LYLN + Sbjct: 75 VGIAKASQLMAAFELGRRMVRLEYQNRYSIRSPEDCASYMMEEMRFLQQEHFVCLYLNTK 134 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 NQ+I +T+F G++N + VHPREV K A AA+++ HNHPSG+ PS+ D +T+RL Sbjct: 135 NQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDIEVTKRL 194 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 V+ ++ I V DH+I+G ++ S E G + Sbjct: 195 VECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B3HA66_ECOLX Length = 157 Score = 181 bits (459), Expect = 9e-45, Method: Composition-based stats. Identities = 83/148 (56%), Positives = 109/148 (73%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 + E+ +I+RA++ L+++ PG +F S+ A + WL L++A ERE F VLYL+NQN+L Sbjct: 10 FSVSEQRVIRRAMRLLEKYQRNPGESFLSSDATKTWLQLHLARQEREMFVVLYLDNQNRL 69 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 + ETLF GTIN TEVHPRE++K AL HNAAAV+LAHNHPSG PS+ADRLIT +V+ Sbjct: 70 LEHETLFLGTINSTEVHPREIVKSALRHNAAAVILAHNHPSGVAEPSRADRLITTNIVKT 129 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L LV++RV DH I+G V SFAE G L Sbjct: 130 LDLVNVRVLDHFIIGAGDVLSFAERGWL 157 >UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonadales RepID=Y523_GEOLS Length = 230 Score = 179 bits (456), Expect = 2e-44, Method: Composition-based stats. Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDR---HLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + + I+ A R E FTS ++ + +E F L L+ + Sbjct: 80 LGLAKAASIKAAFTLGKRFQARRLETLERFTSPAQVFDFFHHELRDNRKELFLTLLLDGK 139 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N++ + G++N++ VHPREV A+ +AAAV+ HNHPSG+ PS+ D IT RL Sbjct: 140 NRITRKVQVSEGSLNQSIVHPREVFAPAVRESAAAVIFIHNHPSGDPAPSREDHEITRRL 199 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A ++ I+V DH+I+G FSF E GLL Sbjct: 200 NEAGEILGIKVLDHIIIGDGAYFSFVESGLL 230 >UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriaceae RepID=YICR_SALA4 Length = 221 Score = 179 bits (455), Expect = 2e-44, Method: Composition-based stats. Identities = 62/151 (41%), Positives = 91/151 (60%), Gaps = 3/151 (1%) Query: 1 MTPGERSL---IQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + + I + A S RE+L + G ERE F V++L+ Q Sbjct: 71 IGLAKFAQLKGIAELARRYYSVRMNEESALLSPEMTREFLQSQLTGEEREIFLVIFLDAQ 130 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++++ LF+GT+N EVHPRE+++ A+ NA+AV+LAHNHPSG PSKAD+LITER+ Sbjct: 131 HRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADKLITERV 190 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++ +DIRV DHLI+G + SFAE G + Sbjct: 191 IKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 221 >UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR9_THEYD Length = 224 Score = 179 bits (455), Expect = 2e-44, Method: Composition-based stats. Identities = 51/150 (34%), Positives = 86/150 (57%), Gaps = 2/150 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVA--FTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 + + + I+ + + R L E F S + + GL++E F L L+ + Sbjct: 75 LGIAKIAQIKASFELGKRALCEKSQEQFFNSAEIVYNYFFPKLNGLKKEVFITLLLDTKL 134 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 +LI + GT+N++ +HPREV K A+ +A AV+L HNHPSG+ TPS+ D IT++L Sbjct: 135 RLIREVKVSEGTLNQSLIHPREVFKDAVKESAYAVILIHNHPSGDPTPSEQDIEITKKLK 194 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A +++I + DH+I+G + FS E G++ Sbjct: 195 KASEILEIPILDHVIIGSGKYFSMKERGVV 224 >UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8Q3_9BURK Length = 239 Score = 178 bits (453), Expect = 4e-44, Method: Composition-based stats. Identities = 72/151 (47%), Positives = 99/151 (65%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHE---PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P +R+ I L+ R + + F +A + +L L++A E F VL+L++Q Sbjct: 89 LGPAKRAEIVAVLELARRAMAQRLQEREVFADPQAVKHYLQLHLAAKGHEVFAVLFLDSQ 148 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N+L+A E LF GT+ +T V+PREV+ RAL+H AAAVVLAHNHPSG V PS+AD +T+ L Sbjct: 149 NKLLAMEELFRGTLTQTSVYPREVVIRALHHGAAAVVLAHNHPSGSVQPSRADEALTQTL 208 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 AL LVD+RV DH+IVG Q S AE GL+ Sbjct: 209 KAALALVDVRVLDHIIVGPGQALSMAETGLI 239 >UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacteriaceae RepID=Y101_ENT38 Length = 221 Score = 178 bits (453), Expect = 4e-44, Method: Composition-based stats. Identities = 55/151 (36%), Positives = 90/151 (59%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + + ++ + R+ S +++L ++ ERE F V++L+NQ Sbjct: 71 IGLAKYAQLKGIAELARRYHSVRVLGDNPLLSPEMTKDFLQSQLSDAEREVFMVIFLDNQ 130 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++++ +F+GT+ EVHPRE+++ A+ NAAAV+LAHNHPSG PSKAD+ ITER+ Sbjct: 131 HRVVKHSRMFSGTLRHVEVHPREIVREAIKVNAAAVILAHNHPSGCAEPSKADKDITERI 190 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++ +DI V DH I+G + SFAE G + Sbjct: 191 IKCCQFMDIHVLDHFIIGRGEYVSFAEQGWI 221 >UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97_BURM1 Length = 169 Score = 178 bits (452), Expect = 5e-44, Method: Composition-based stats. Identities = 68/146 (46%), Positives = 91/146 (62%) Query: 3 PGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIA 62 I A + + + G FTS A +++L +AG E E F VL+L+ +++LI Sbjct: 24 QASADQILEAARQVIDQKMQRGDEFTSPAAVKDYLRAKLAGFEHEVFAVLFLDTRHRLID 83 Query: 63 GETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALG 122 +F GTI+ EVHPREV+K AL NAAAV+++HNHPSG PS ADR +T +L QAL Sbjct: 84 YAEMFRGTIDSAEVHPREVVKEALRLNAAAVIISHNHPSGNPEPSAADRAMTSQLRQALA 143 Query: 123 LVDIRVPDHLIVGGNQVFSFAEHGLL 148 LVD+R DH+IV G SFAE GL+ Sbjct: 144 LVDVRTLDHIIVAGGTTTSFAERGLI 169 >UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax=uncultured archaeon RepID=D1JB12_9ARCH Length = 330 Score = 177 bits (451), Expect = 7e-44, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 93/151 (61%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGV---AFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + + I+ + +L E +++ ++L L M L+ E F+V++L++ Sbjct: 161 VGAAKVAQIKAVQALAEEYLKESMKSVSKVRNSKEVFDYLYLTMRDLKIEIFKVIFLDSA 220 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 NQ I E LF GT+N + V+PRE++K A+ NAA+++ HNHPSG+ TPS +DR ITE L Sbjct: 221 NQTIDDENLFEGTLNASSVYPREIVKSAVNKNAASLIFVHNHPSGDPTPSGSDRAITEDL 280 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + A LV I V DH+I+G N FSFA+ GLL Sbjct: 281 IYACNLVQITVLDHIIIGDNVYFSFADEGLL 311 >UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria RepID=Y3944_XANC8 Length = 225 Score = 177 bits (451), Expect = 7e-44, Method: Composition-based stats. Identities = 68/151 (45%), Positives = 96/151 (63%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLH---EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + AL+ +RHL E G A + + + + E F L+L+++ Sbjct: 74 LGPASACKLSAALELANRHLLSDLERGEALSDPSSVGRYFSQRLRARNYEVFAALFLDSR 133 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++ IA E LFTGTI+ E+HPREV++RAL HNAAAVV+ HNHPSG PS+ADR +T+RL Sbjct: 134 HRAIAFEELFTGTIDAAEIHPREVVRRALLHNAAAVVVGHNHPSGNPEPSEADRAVTQRL 193 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +QALGLVDIR+ DH ++G + S AE G + Sbjct: 194 LQALGLVDIRLLDHFVIGDGRPVSLAERGWV 224 >UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0A3_9PROT Length = 205 Score = 177 bits (450), Expect = 8e-44, Method: Composition-based stats. Identities = 70/149 (46%), Positives = 96/149 (64%), Gaps = 4/149 (2%) Query: 4 GERSLIQRALKTLDRHLHEPGVA----FTSTRAAREWLILNMAGLEREEFRVLYLNNQNQ 59 ++I A + + R L E + +++L L + G ++E F VL+L+ Q++ Sbjct: 57 APAAIISAAKELVMRALSEDITQNPINLNNPVEVKKYLKLLLGGRQQEVFVVLFLDTQHR 116 Query: 60 LIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQ 119 LIA E LF GT+ +T V+PREV+KRAL HNAAAV+LAHNHPSG PS+AD+L+T L Q Sbjct: 117 LIAAEELFHGTLTQTSVYPREVVKRALMHNAAAVLLAHNHPSGLAEPSQADQLLTNALKQ 176 Query: 120 ALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 AL LVD+R DH I+G SFAE GL+ Sbjct: 177 ALALVDVRALDHFIIGDESALSFAERGLI 205 >UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID=Y1530_RUBXD Length = 227 Score = 177 bits (449), Expect = 1e-43, Method: Composition-based stats. Identities = 60/151 (39%), Positives = 88/151 (58%), Gaps = 4/151 (2%) Query: 1 MTPGERSLIQRALKTLDR---HLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + ++ AL+ R + +S L +A L+RE F V+ LN + Sbjct: 78 IGEAKACILLAALELARRLSVARNPGRPVISSPADVDGLLRGRIANLDREHFVVVLLNTK 137 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N++I T+ GT++ + VHPREV K A+ +AA+VVLAHNHPSG V PS+ DR +T R+ Sbjct: 138 NEVIEAPTISVGTLSSSLVHPREVFKPAIRASAASVVLAHNHPSGRVEPSREDREVTGRV 197 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A G++ I V DH+IVG FS EHG+L Sbjct: 198 AEAGGIIGIEVLDHVIVGEG-YFSMKEHGML 227 >UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriaceae RepID=C6DAT0_PECCP Length = 157 Score = 177 bits (449), Expect = 1e-43, Method: Composition-based stats. Identities = 74/144 (51%), Positives = 102/144 (70%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E+ +IQ AL L++ + + F ++ + WL+L ++ LERE F VLYL+NQ++LI E Sbjct: 14 EQRIIQMALCLLEKRVRKNARQFKTSEDTKSWLMLELSNLEREVFMVLYLDNQHRLIEKE 73 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 + G IN TEVHPRE++K +L HNAAAV+LAHNHPSG PS+ADR IT+RL +L + Sbjct: 74 VIALGGINSTEVHPREILKASLRHNAAAVILAHNHPSGWAEPSQADRNITDRLKDSLSQL 133 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 D++V DHL+VG +V SFAE G L Sbjct: 134 DVKVLDHLVVGSTEVVSFAERGWL 157 >UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcinaceae RepID=Y2303_METBF Length = 229 Score = 177 bits (449), Expect = 1e-43, Method: Composition-based stats. Identities = 47/151 (31%), Positives = 83/151 (54%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHL---HEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + + I + R EP S + + M ++E+F L L+ + Sbjct: 78 VGKAKAAQIAAVFELARRLETFVEEPKRKVCSPKDVYTLMYPKMREQKKEKFITLCLDTK 137 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 NQ++ E + G++N + VHPREV K AL ++A+V++ HNHPSG+ +PS+ D ++TE++ Sbjct: 138 NQILKEEVVSIGSLNASIVHPREVFKSALMESSASVIMIHNHPSGDPSPSREDIMVTEKM 197 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 V+ L+ I V DH+I+G + S + G + Sbjct: 198 VEGGKLLGIDVLDHIIIGEGRYVSLKDEGFV 228 >UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcus RepID=Y1555_STAAE Length = 228 Score = 176 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 49/151 (32%), Positives = 81/151 (53%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALK---TLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + ++ A + + R + T +++I M L +E F +L LN++ Sbjct: 74 IGLQKAITLKAAFELGERMGRRAENNRIKITQPSDVADYMIPTMKDLTQEHFVILLLNSK 133 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N +I +F GT+N + VHPRE+ A+ NA A++ HNHPSG+VTPS+ D + T RL Sbjct: 134 NVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDIITTMRL 193 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + ++ I + DH+I+G N+ S E G Sbjct: 194 KECGLILGIDLLDHIIIGDNRFTSLVEAGYF 224 >UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria RepID=Q0AJV4_NITEC Length = 167 Score = 176 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 61/146 (41%), Positives = 92/146 (63%) Query: 3 PGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIA 62 + +IQ+A+ L+ + + G +A R++L L + E F ++LN+Q+Q++A Sbjct: 21 QQDDRIIQQAIALLEHRVFKAGPTLDGPKAVRDYLRLKLMAEPNEVFVAVFLNSQHQVLA 80 Query: 63 GETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALG 122 E LF GT++ V+PR V++RAL NA+A++ +H HPSG PS ADR IT RL L Sbjct: 81 CECLFKGTVSEASVYPRVVVQRALELNASALIFSHQHPSGVAEPSMADRAITNRLKFILS 140 Query: 123 LVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++DIRV DH I+G + +SFAE GLL Sbjct: 141 MIDIRVVDHFIIGKGEPYSFAESGLL 166 >UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID=Y065_PELCD Length = 227 Score = 176 bits (447), Expect = 2e-43, Method: Composition-based stats. Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRAL---KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + + +Q + R+ PG +TS +A + +RE F L L+++ Sbjct: 77 IGPAKAAELQAVFELARRFGRNPLRPGDRYTSPQAVFAHFHERLRDHKRERFIALLLDSK 136 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N+L+ + G++ + VHPR+V + +AAAV+ HNHPSG+ +PS+ D IT+RL Sbjct: 137 NRLLREVGISEGSLTASIVHPRDVFAPVVRESAAAVLFVHNHPSGDPSPSREDLDITQRL 196 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + L+ +RV DH+I+G S A+ G+L Sbjct: 197 REVGELMGVRVLDHIIIGDEGYVSLADRGVL 227 >UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SDF8_CHRVI Length = 167 Score = 176 bits (447), Expect = 2e-43, Method: Composition-based stats. Identities = 67/144 (46%), Positives = 94/144 (65%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 ER+L+ A+ L+RH A TS A R++L L + GL E F VL L+N+++++ + Sbjct: 24 ERTLVAEAIDCLERHYRVAQEALTSPDATRDYLKLRLYGLTYEVFAVLLLDNRHRVLRYQ 83 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GTI+ VHPREV++ + AAAV+ AHNHPSG PS+ADR +T +L AL L+ Sbjct: 84 ELFRGTIDTAYVHPREVVRLVIESGAAAVIFAHNHPSGSSDPSQADRTLTRKLQDALALI 143 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 ++RV DH+IVG + SFAE G L Sbjct: 144 EVRVLDHIIVGEGRGMSFAEQGWL 167 >UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular organisms RepID=Y2289_ALKMQ Length = 232 Score = 176 bits (446), Expect = 2e-43, Method: Composition-based stats. Identities = 52/151 (34%), Positives = 84/151 (55%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGV---AFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + S I A++ R V S L+ M L++E F + LN + Sbjct: 82 VGIAKASQILAAVELGKRISLTSRVNHYRIKSPDDVSNLLMEEMRYLKKEYFNIALLNTK 141 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 +++IA E + G++N + VHPREV A+ +++A++L HNHPSG+ +PS D IT+RL Sbjct: 142 HEVIAIENISIGSLNASIVHPREVFVVAIKRSSSAIILVHNHPSGDPSPSGEDIRITKRL 201 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 V+A L+ I V DH+I+G N +S E ++ Sbjct: 202 VEAGKLLGIEVLDHIIIGDNVYYSLKEKSMM 232 >UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepID=Y4094_ENTS8 Length = 230 Score = 176 bits (446), Expect = 3e-43, Method: Composition-based stats. Identities = 62/151 (41%), Positives = 97/151 (64%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHE---PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + + ++ + R+ A S R++L +A ERE F V++L++Q Sbjct: 80 VGMAKYAQLKAIGELARRYYRSRPCEETALLSPTITRDFLESQLAEQEREVFLVIFLDSQ 139 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N++I TLFTGT++ EVHPRE+++ A+ NAA ++LAHNHPSG PS+AD+++TER+ Sbjct: 140 NRIIRQNTLFTGTLSHVEVHPREIVREAVRLNAAGIILAHNHPSGRAEPSRADKMVTERI 199 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 V++ LVDIRV DHL++G + SFAE G + Sbjct: 200 VKSCQLVDIRVLDHLVIGRGEYVSFAERGWI 230 >UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacteria RepID=Y2732_RALEJ Length = 228 Score = 175 bits (445), Expect = 3e-43, Method: Composition-based stats. Identities = 69/151 (45%), Positives = 96/151 (63%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGV---AFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 M + + +Q + R L E S A R +L L +A L +E F L+L+ + Sbjct: 74 MGEAKYTQLQAVPELARRMLAESLELPSGLDSPAAVRSYLRLTLAPLAQEVFVCLFLDTR 133 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N++IA E LF GT+N+T V+PREV +RAL HNAA+V++AHNHPSG TPS++D +T L Sbjct: 134 NRMIASEELFRGTLNQTAVYPREVARRALAHNAASVIVAHNHPSGCCTPSQSDLQMTRML 193 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +AL L+D+R+ DH +V G V SFAEHG L Sbjct: 194 ARALDLIDVRLLDHFVVAGTHVHSFAEHGEL 224 >UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia RepID=A7FEQ9_YERP3 Length = 162 Score = 175 bits (445), Expect = 3e-43, Method: Composition-based stats. Identities = 71/145 (48%), Positives = 99/145 (68%) Query: 4 GERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAG 63 ++ +I +AL L+ L TS A + WL L++ RE F VL+L+N+++L+A Sbjct: 16 AQQQIISQALAILEIQLRHRPYTLTSPEAVKAWLQLHLRPQGRECFMVLFLDNRHRLMAS 75 Query: 64 ETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGL 123 ET+ GT N T V+PREV+ RAL+H AAVV+AHNHP+G+ TPS+ADR +T +LV AL + Sbjct: 76 ETVSVGTFNATTVYPREVVIRALHHRCAAVVIAHNHPAGDPTPSQADRTLTAQLVNALNM 135 Query: 124 VDIRVPDHLIVGGNQVFSFAEHGLL 148 VDIRV DHLI+G ++ S AE G L Sbjct: 136 VDIRVLDHLIIGESEPVSLAELGWL 160 >UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium RepID=B1YJT0_EXIS2 Length = 217 Score = 175 bits (445), Expect = 3e-43, Method: Composition-based stats. Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + I L+ R + EP S A E L+ M ++E F LYLN + Sbjct: 67 VGKAKALQIMAGLELGRRLVTEPKWVRPVVRSPDDAAELLMEEMRLYQQEHFICLYLNTK 126 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N++I+ +TLF G +N + VHPR++ + A+ +AA+ + HNHPSG+ TPS+ D ++ER+ Sbjct: 127 NEVISKKTLFIGGLNTSIVHPRDIFREAIRCSAASFIAVHNHPSGDPTPSREDIEVSERM 186 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 V+A L+ I DHL++G Q S + G + Sbjct: 187 VEAGRLIGISCIDHLVIGHGQFISMKQRGFM 217 >UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadales RepID=A0R7V6_PELPD Length = 168 Score = 175 bits (444), Expect = 4e-43, Method: Composition-based stats. Identities = 52/154 (33%), Positives = 84/154 (54%), Gaps = 8/154 (5%) Query: 2 TPGERSLIQRALKTLDRHLHEPGV-------AFTSTRAAREWLILNMAGLEREEFRVLYL 54 TP + ++ ++++ R FTS + E + +E F L+L Sbjct: 16 TPATKRIVLKSIEARYRKEAVREDAPEWVTTRFTSPKQVFELFKD-LIYETKEHFITLHL 74 Query: 55 NNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLIT 114 + +N+++ + + G++N++ VHPREV K AL NAAA++ H HPSG+ PS D IT Sbjct: 75 DGKNRIMCMDRVSIGSLNQSIVHPREVFKTALLSNAAAIICVHQHPSGDPNPSSEDLSIT 134 Query: 115 ERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +RL +A ++ IRV DH++VG SF E GL+ Sbjct: 135 KRLKEAGEIMGIRVLDHIVVGHEDYISFVEKGLM 168 >UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MFA0_RHOM4 Length = 245 Score = 174 bits (443), Expect = 6e-43, Method: Composition-based stats. Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + + A + R + + + + L+RE F+++ LN Sbjct: 94 VGPAKAVQLVAAFEIGRRVEAQRPGRRIQVRTPADVAACYGPLLRDLKREVFKIVLLNTA 153 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N +IA T+ G + + V PR V +RA+ NAA ++ HNHPSG PS D IT +L Sbjct: 154 NYIIADYTISEGGLAASIVEPRAVFQRAILDNAAGIICLHNHPSGNPEPSAEDIRITRQL 213 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 V+A L+ I V DH+I+ G S AE GL+ Sbjct: 214 VEAGRLLGIPVHDHIIIAGTTYTSLAERGLM 244 >UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobacteria RepID=Y510_VIBCH Length = 157 Score = 174 bits (442), Expect = 7e-43, Method: Composition-based stats. Identities = 70/144 (48%), Positives = 92/144 (63%), Gaps = 2/144 (1%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E +++ A + L G A T+ A +E++ + ERE F +L L+NQN+LI + Sbjct: 16 ENEILEHAAEILANRYVR-GDALTNPDATKEYVRCKLGSYEREVFALLLLDNQNRLIEFK 74 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GT++ V+PREV+K L NAAAV+ AHNHPSG+ TPS+ADR ITERL L LV Sbjct: 75 ELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADRRITERLKDTLALV 134 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 D+RV DH IV G+ SFAE G L Sbjct: 135 DVRVLDH-IVTGDTCTSFAERGWL 157 >UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria RepID=Y1786_VIBCH Length = 158 Score = 174 bits (442), Expect = 8e-43, Method: Composition-based stats. Identities = 71/144 (49%), Positives = 95/144 (65%), Gaps = 2/144 (1%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E +++ A + L++ G F T E+L +AG E E F VL+L+NQ++LI + Sbjct: 17 EHRVLEEAAEILEQRYVR-GETFARTENTTEYLRCKLAGYEHEIFAVLFLDNQHRLIEFK 75 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GT++ V+PREV+K AL NAAAV+ AHNHPSG+ PS+ADR IT+RL AL LV Sbjct: 76 ELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADRRITQRLKDALSLV 135 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 DIRV DH++VG + SFAE G L Sbjct: 136 DIRVLDHVVVGKSS-VSFAERGWL 158 >UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales RepID=C9L5T8_RUMHA Length = 231 Score = 174 bits (442), Expect = 8e-43, Method: Composition-based stats. Identities = 44/151 (29%), Positives = 82/151 (54%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQ---RALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + I+ K + + G++F + ++ + + E+E + L+ + Sbjct: 81 IGKVKAIQIKCIGELSKRIATATAKKGLSFRHPASIADYYMEQLRHEEQELLICMMLDTK 140 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N L+ E +F GT+N + +PRE+ A+ ++A ++L HNHPSG+ TPS+AD T+R+ Sbjct: 141 NHLLGDEMIFKGTVNSSLANPREIFLSAVSYHAVGILLVHNHPSGDCTPSQADVDFTQRV 200 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A L+ I + DH+I+G + SF E G+ Sbjct: 201 KEAGELLGIPLLDHIIIGDCKYLSFREQGIF 231 >UniRef50_A1TJG0 DNA repair protein RadC n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TJG0_ACIAC Length = 167 Score = 174 bits (441), Expect = 1e-42, Method: Composition-based stats. Identities = 69/148 (46%), Positives = 98/148 (66%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 +T E L+ RAL L++ + A ++ R ++L L +AG E F V++L+ QN+ Sbjct: 20 LTVQESRLVHRALHVLEQRMFHREAAISTPRELYDYLRLKLAGELHEVFGVVFLDCQNRA 79 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 IA E LF GTIN+ V+PR ++KRA+ NA++V+L HNHPSG S ADR +TER+ + Sbjct: 80 IAFEALFRGTINQAVVYPRVIVKRAMDLNASSVILVHNHPSGTSQCSDADRGLTERICAS 139 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 LGL+D+RV DH+IVG +SFAE GLL Sbjct: 140 LGLIDVRVVDHVIVGSGTPYSFAEAGLL 167 >UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUN7_AERS4 Length = 296 Score = 173 bits (440), Expect = 1e-42, Method: Composition-based stats. Identities = 69/147 (46%), Positives = 87/147 (59%), Gaps = 1/147 (0%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 T E+ +I A + R + S E+L A LE E F ++ L+NQ+++ Sbjct: 17 FTEREKRIIALAHSIIARRFTR-LDSLNSPEMVVEYLKTRFATLEHETFAMILLDNQHRV 75 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 I L GTI+ V+PREV+K AL HNAAAV+LAHNHPSG PS+ADR ITERL A Sbjct: 76 INAVDLSHGTIDSAAVYPREVVKTALKHNAAAVILAHNHPSGVAEPSRADRQITERLQAA 135 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGL 147 L LVDIRV DH++V G SFA G Sbjct: 136 LDLVDIRVLDHIVVAGENSMSFAVRGF 162 >UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R890_9FIRM Length = 227 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 83/149 (55%), Gaps = 3/149 (2%) Query: 3 PGERSLIQRALKTLDRHL---HEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQ 59 + +Q A R + A +S + EWL+ + ++E F V++LN +NQ Sbjct: 76 QAKAIELQAAFALGKRIAFDVLKESEAISSPQKLSEWLMQQIGFQQQEHFLVVFLNQRNQ 135 Query: 60 LIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQ 119 ++A +TLF GT+ VHPRE+ K A+ A ++ AHNHPSG S AD IT+++++ Sbjct: 136 ILAYKTLFVGTLTSANVHPREIFKEAMRIGCAKIICAHNHPSGNPQVSDADIAITQQIME 195 Query: 120 ALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 LV I + DH++VGGN+ S E G + Sbjct: 196 CGQLVSIPLLDHIVVGGNRYVSLREEGYM 224 >UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. K31 RepID=B0T9F0_CAUSK Length = 223 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 92/148 (62%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 + + L++ A + + R TS ++L MAGL REEF VL+L+ +NQL Sbjct: 76 LAAMDLKLLREAARRVTRADLAQRQLLTSFSQVADYLRALMAGLPREEFWVLFLDRRNQL 135 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 ++ E L G+++ V+PREV++RAL N +A++LAHNHPSG+ PS+ D +T+ L++A Sbjct: 136 LSAERLGVGSVDHAPVYPREVMRRALELNCSAMILAHNHPSGDPQPSQPDIEMTKTLIEA 195 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + I++ DH+IV G V SF +GL+ Sbjct: 196 GKALQIQIHDHMIVAGGAVVSFRANGLI 223 >UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J365_DESRM Length = 231 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKT---LDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + + A L + L++E F L LN + Sbjct: 81 IGPSMAARLMAAFALTKKLASAGASENTVIRCPEDIFYLMKNEAKLLDKEYFSALLLNTK 140 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N +I ET+ GT+N + VHPRE+ K+A+ +AAAV+L HNHPSG+ TPS+ D +T+RL Sbjct: 141 NHVIGKETISIGTLNSSMVHPRELFKQAIRRSAAAVILVHNHPSGDPTPSREDISLTKRL 200 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++A ++ I V DH+++G ++ S GL+ Sbjct: 201 IEAGEIIGIDVLDHIVLGFDKFTSLKSKGLI 231 >UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular organisms RepID=Y3252_RHOFD Length = 234 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 67/151 (44%), Positives = 97/151 (64%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLH---EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P +R+ + L+ R L + F + A + +L L++A E F VL+L+ Q Sbjct: 84 LGPAKRAELVAVLELSRRALAQQLKERTIFATPDAVKHYLQLHLAAKPHEVFAVLFLDVQ 143 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N+L+A E LF GT+ +T V+PREV+ RAL+H A++VVLAHNHPSG V PS+AD ++T+ L Sbjct: 144 NRLLALEELFRGTLTQTSVYPREVVLRALHHQASSVVLAHNHPSGTVQPSRADEMLTQTL 203 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L L+D+RV DH+IV + S AE GLL Sbjct: 204 KTTLALIDVRVLDHVIVAPGEALSMAERGLL 234 >UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobacteria RepID=Y700_RHOP2 Length = 250 Score = 172 bits (438), Expect = 2e-42, Method: Composition-based stats. Identities = 54/146 (36%), Positives = 84/146 (57%), Gaps = 3/146 (2%) Query: 1 MTPG---ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + E L+ A + + + +S A ++ MA +RE+FR+L+L+ + Sbjct: 100 LGEAAITEIKLVAAAAARVTKGQVKSRTVLSSWSAVIDYCRTTMAFADREQFRILFLDKR 159 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 NQLIA E GT++ T V+PRE++KRAL +A AV++ HNHPSG+ TPS+AD +T+ + Sbjct: 160 NQLIADELQQVGTVDHTPVYPREIVKRALELSATAVIMVHNHPSGDPTPSQADIQMTKTI 219 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFA 143 V + + V DH+IVG N S Sbjct: 220 VAIAEPLGVAVHDHIIVGKNGHASLK 245 >UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiaceae RepID=Y2712_RALPJ Length = 224 Score = 172 bits (438), Expect = 2e-42, Method: Composition-based stats. Identities = 63/151 (41%), Positives = 95/151 (62%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHE---PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 M P + + + L+ R L E G F S ++ +++L L + E F +L+ + Sbjct: 74 MGPAKYAQLHALLEVARRALKEDFTQGQTFESAQSVKDFLRLTLGHRPHEVFACFFLDVR 133 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++LIA E LF GT+ V+PRE+ KRAL+HNAAAV+LAHNHP+G PS++D ++T L Sbjct: 134 HRLIAWEELFRGTLTEARVYPREIAKRALHHNAAAVILAHNHPTGNTEPSESDVILTREL 193 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +AL ++D+ V DH+IVG N V+ F EHG + Sbjct: 194 CRALAMLDVIVLDHMIVGRNHVYGFLEHGKM 224 >UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomonas RepID=Q3BQ28_XANC5 Length = 187 Score = 171 bits (435), Expect = 5e-42, Method: Composition-based stats. Identities = 70/143 (48%), Positives = 91/143 (63%), Gaps = 1/143 (0%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E ++ A L++ L G S A ++LI A L E F V++L+ ++Q++A E Sbjct: 45 EEGILLAAATILEQRLQRQG-KIHSPDQAGDYLISRCAHLPHEVFGVVFLDIKHQILATE 103 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GTI+ EVHPR V KRAL NAAAV+L HNHPSG PS+ADR +TERL +AL L+ Sbjct: 104 HLFFGTIDGCEVHPRVVAKRALDLNAAAVILFHNHPSGNPEPSEADRKVTERLQKALSLL 163 Query: 125 DIRVPDHLIVGGNQVFSFAEHGL 147 DIRV DHL++GG Q S A G Sbjct: 164 DIRVLDHLVIGGRQHISLAARGW 186 >UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YL92_THEYD Length = 222 Score = 171 bits (434), Expect = 6e-42, Method: Composition-based stats. Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 1/148 (0%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 + + I A++ R L + G+ + + + ++E F L L+ + L Sbjct: 73 VGLAKACQIMAAIEFSKRFLLKEGIKIKNVDDVLKI-TEELKDKKQEYFLSLTLDGASNL 131 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 I T+F GT+N + VHPRE+ A+ AA ++ HNHPSG+ PSK D IT+RLV+ Sbjct: 132 IQKRTVFIGTLNHSIVHPREIFADAISDRAAGIIFVHNHPSGDSEPSKQDIEITKRLVEI 191 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++ I V DH+I+ N +SF G+L Sbjct: 192 GKMLGIEVIDHIIISKNGYYSFQAEGML 219 >UniRef50_C5D8D2 DNA repair protein RadC n=4 Tax=Firmicutes RepID=C5D8D2_GEOSW Length = 169 Score = 171 bits (434), Expect = 6e-42, Method: Composition-based stats. Identities = 51/146 (34%), Positives = 79/146 (54%) Query: 3 PGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIA 62 P +R I + + S A + L + +RE+F V+ L+ +NQ A Sbjct: 24 PAKRVNIVSLKLVRESSVLYRERQIKSPEDAYKLLKPFLVEADREKFVVVCLDTKNQPTA 83 Query: 63 GETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALG 122 G++N + VHPREV K A+ N+A++++AHNHPS + TPS+ D +T+RLV+A Sbjct: 84 INICHIGSLNSSIVHPREVFKSAILSNSASIIVAHNHPSSDPTPSREDIEVTKRLVEAGR 143 Query: 123 LVDIRVPDHLIVGGNQVFSFAEHGLL 148 +V I + DHLIV + S E G + Sbjct: 144 IVGIELLDHLIVCEEKFVSLKEKGYI 169 >UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax=Gammaproteobacteria RepID=Q47ZW8_COLP3 Length = 158 Score = 171 bits (434), Expect = 7e-42, Method: Composition-based stats. Identities = 68/144 (47%), Positives = 95/144 (65%), Gaps = 2/144 (1%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E ++ A + L AFTS++A +++L +A E E F V+ L+NQ+Q+I Sbjct: 17 ENQILDAAAEILACKYVRK-DAFTSSQATKDFLRFKLANKEHEIFAVMLLDNQHQMIDFV 75 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GTI+ + V+PREV+K L NAAAV+L HNHPSG +PS AD+ IT+RL +AL L+ Sbjct: 76 ELFRGTIDASAVYPREVVKTVLLENAAAVILTHNHPSGLNSPSIADKDITKRLQEALALI 135 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 D+RV DH+I+G SFAE+GLL Sbjct: 136 DVRVLDHIIIGEGTY-SFAENGLL 158 >UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaproteobacteria RepID=Y7200_HAEIE Length = 221 Score = 171 bits (433), Expect = 8e-42, Method: Composition-based stats. Identities = 65/151 (43%), Positives = 94/151 (62%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPG---VAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + +Q + R+L + + +L+ + ERE F VL+L+NQ Sbjct: 71 LGITQFIQLQAITEMTKRYLKQEMLSTPIINDPETVKLFLLTELQHEEREVFMVLFLDNQ 130 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++LI E LF GTIN + V+PRE+IK ALY NAAA++LAHNHPSG PS +D+LIT+++ Sbjct: 131 HRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGVTEPSYSDQLITKKI 190 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A L++I V DHLIVG + +SFAE+ LL Sbjct: 191 QDAAELMEICVLDHLIVGKSDCYSFAENCLL 221 >UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrueckii subsp. bulgaricus RepID=Q04B84_LACDB Length = 204 Score = 171 bits (433), Expect = 8e-42, Method: Composition-based stats. Identities = 48/141 (34%), Positives = 79/141 (56%) Query: 8 LIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLF 67 I+ A+ L R + + +L + G ++E+F VLY + Q L+ + LF Sbjct: 64 TIEVAMDRLRRTDMRRSSDWAGSSKIGNYLANKLLGQKQEQFWVLYFDQQQNLLGEKMLF 123 Query: 68 TGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIR 127 GT++R+ VHPRE+ + A+ + A++++AHNHPSG +TPS D +T+ L +A ++ I Sbjct: 124 QGTLDRSWVHPREIFRWAVVYGCASIIVAHNHPSGALTPSDNDLELTKGLKKASKIMKIT 183 Query: 128 VPDHLIVGGNQVFSFAEHGLL 148 DH I+GG + S E L Sbjct: 184 FLDHFIIGGGEYLSLRERELF 204 >UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacteria RepID=Q5E054_VIBF1 Length = 157 Score = 170 bits (432), Expect = 1e-41, Method: Composition-based stats. Identities = 67/144 (46%), Positives = 94/144 (65%), Gaps = 2/144 (1%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E +++ A + L G AF++ A + +L + ERE F VL L+NQ++LI + Sbjct: 16 ENEILEHAAEILANRYVR-GDAFSNPTATQNYLRYKLGHYEREVFAVLLLDNQHRLIEFK 74 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GT++ V+PREV+K L NAAAV+ AHNHPSGE TPS+AD+ IT RL +AL L+ Sbjct: 75 ELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGESTPSQADKRITTRLKEALALI 134 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 D++V DH++VG SFAE GL+ Sbjct: 135 DVQVLDHIVVG-ETCVSFAERGLI 157 >UniRef50_Q2S042 UPF0758 protein SRU_2338 n=1 Tax=Salinibacter ruber DSM 13855 RepID=Y2338_SALRD Length = 233 Score = 170 bits (432), Expect = 1e-41, Method: Composition-based stats. Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 4/152 (2%) Query: 1 MTPGERSLIQRALKTLDR----HLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNN 56 + P + + + A + R + + T + + L++E F+V++LN Sbjct: 81 VGPAKATKLAAAFEAGRRVESQRQQDERMQVTCPADVADVYGPLLRDLDKEVFKVVHLNT 140 Query: 57 QNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITER 116 N +I T+ G ++ + V PR V ++A+ +AAAV+ HNHPSG PS+ D IT + Sbjct: 141 ANVIIGDYTVSEGGLSSSVVEPRGVFEQAILDDAAAVICLHNHPSGNPEPSREDIRITRQ 200 Query: 117 LVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L +A G + I V DHLI+ G + S AE G++ Sbjct: 201 LAEAGGTMGIPVHDHLIIAGTKHTSLAERGVI 232 >UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E733_MACCJ Length = 223 Score = 170 bits (432), Expect = 1e-41, Method: Composition-based stats. Identities = 51/151 (33%), Positives = 82/151 (54%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDR---HLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + ++I ++ R H E + S A L+ + + +E F VL LN + Sbjct: 73 IGQKKAAMILAIIELAIRMHTHTKETRIKVKSPACAANLLMERLRYMTQEHFIVLSLNTK 132 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N ++ T+F G++N + VHPREV K A+ +AAA+++ HNHPSG+ PS D T+RL Sbjct: 133 NIVMHESTIFIGSLNASIVHPREVFKEAVKRSAAAIIVVHNHPSGDPEPSYEDIEATKRL 192 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++ + I V DH+I+G S E G+L Sbjct: 193 IKCGEIFGIDVLDHIIIGDGYYVSIKEKGIL 223 >UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacteria RepID=Q0BRK0_GRABC Length = 271 Score = 170 bits (432), Expect = 1e-41, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 81/134 (60%) Query: 15 TLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRT 74 L R + +L ++A + E+FRVL+L+N+NQLIA E L GT+N Sbjct: 138 RLLRADAVAQPVLNNWERLIAYLNASLAREKNEQFRVLFLDNRNQLIADEILAHGTVNHA 197 Query: 75 EVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIV 134 V+PREV+KRAL +A A+++ HNHPSG+ TPS D +T L +A L+ + + DH+I+ Sbjct: 198 PVYPREVVKRALELHATALIVVHNHPSGDPTPSAEDIRMTRELREAGRLLSLDLHDHVII 257 Query: 135 GGNQVFSFAEHGLL 148 G + SF + GLL Sbjct: 258 GRHGWSSFRKQGLL 271 >UniRef50_D2NHT0 Putative phage DNA repair protein n=1 Tax=Escherichia coli SE15 RepID=D2NHT0_ECOLX Length = 156 Score = 170 bits (431), Expect = 1e-41, Method: Composition-based stats. Identities = 68/148 (45%), Positives = 95/148 (64%), Gaps = 1/148 (0%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 T E ++ +A + R+ + GV S R +++ +A LE EEF ++ L+NQNQL Sbjct: 10 FTQRETRILDQARDIISRYY-QRGVQLCSPDDVRRCVMVELAPLEHEEFGIILLDNQNQL 68 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 + E LF GT+N VHPREVIKR L HNAAAV+L HNHPSGE PS+ D +T++L + Sbjct: 69 LHREILFRGTLNSVSVHPREVIKRVLKHNAAAVILVHNHPSGEPEPSRCDIQLTKKLQEL 128 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L ++D+R+ DH IV G + S AE GL+ Sbjct: 129 LEILDVRLLDHFIVAGTETVSMAERGLV 156 >UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonella RepID=A1UT15_BARBK Length = 265 Score = 170 bits (431), Expect = 1e-41, Method: Composition-based stats. Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 3/150 (2%) Query: 2 TPGER---SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 P +I R F+S + MA RE+FR+L+L+ ++ Sbjct: 116 GPASAIDLKIISAVAGRFARAQLSKRDIFSSWDKVLAYCKAVMAHETREQFRILFLDKKH 175 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 L++ E TGTI+RT V+PREV+ RAL +A+ ++L HNHPSG+ +PS+ D +T RL Sbjct: 176 GLLSDEVQQTGTIDRTPVYPREVVSRALELSASGIILVHNHPSGDASPSQEDISMTYRLK 235 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +DI + DHLI+ N SF L+ Sbjct: 236 DVANALDITLHDHLIIARNDYISFKALKLI 265 >UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria RepID=Q0ACW7_NITEC Length = 173 Score = 170 bits (431), Expect = 2e-41, Method: Composition-based stats. Identities = 63/147 (42%), Positives = 89/147 (60%) Query: 2 TPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLI 61 T +I A + + A T A ++ + G E E F +++LN+Q +LI Sbjct: 27 TVASDEMIFTATRAAIERKYPANTAMTKPEIAADYFKNKLNGFEHEVFSIIFLNSQYRLI 86 Query: 62 AGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQAL 121 A +F GT+ V+PREV+K A+ +NAAAV+LAH HPS E PS+AD+ IT+RL +AL Sbjct: 87 AYREMFQGTLTCASVYPREVVKAAISYNAAAVILAHCHPSKETEPSQADKAITKRLKEAL 146 Query: 122 GLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L+D+ V DH+IVGGN S AE GL+ Sbjct: 147 DLIDVCVLDHIIVGGNTTKSMAEMGLV 173 >UniRef50_B9ECC3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9ECC3_MACCJ Length = 150 Score = 170 bits (431), Expect = 2e-41, Method: Composition-based stats. Identities = 47/136 (34%), Positives = 76/136 (55%) Query: 13 LKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTIN 72 +K R + + S ++ + RE+F ++ LN +N++ T+F GTIN Sbjct: 15 VKQYYRKTRDERIKVKSPDNVADFCKKLIGNSVREKFLLVGLNTKNEITFVYTVFIGTIN 74 Query: 73 RTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHL 132 + +HPREV + A+ ++ A+++LAH HPS + TPS DR T+R + L+ I V DH+ Sbjct: 75 MSPIHPREVFQVAILNSCASIILAHCHPSDDPTPSSEDREATKRFEECGELLGIPVLDHI 134 Query: 133 IVGGNQVFSFAEHGLL 148 IV + FSF E+ L Sbjct: 135 IVTESSYFSFRENNLF 150 >UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAN5_HAHCH Length = 183 Score = 169 bits (430), Expect = 2e-41, Method: Composition-based stats. Identities = 63/141 (44%), Positives = 91/141 (64%) Query: 8 LIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLF 67 +++ A + L + +E+L++++A RE F L+L+ QN+LIA E LF Sbjct: 31 VLKAAKRALAQRFKRHSCHMDDPGKVKEYLMMHLAPEPRETFVGLFLDTQNRLIAYEVLF 90 Query: 68 TGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIR 127 G I+ ++PREV+K AL HNAA V++AHNHPSG+ PS D+LIT RL+QAL LV+I Sbjct: 91 RGAIDEAHIYPREVVKAALRHNAAKVIVAHNHPSGDPKPSVNDQLITYRLLQALMLVEIP 150 Query: 128 VPDHLIVGGNQVFSFAEHGLL 148 + DH +VGG+QV S A G+ Sbjct: 151 LIDHFVVGGDQVVSMAAQGIF 171 >UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria RepID=Y767_ROSS1 Length = 233 Score = 169 bits (429), Expect = 2e-41, Method: Composition-based stats. Identities = 44/150 (29%), Positives = 87/150 (58%), Gaps = 3/150 (2%) Query: 1 MTPGERSLIQRALKTLDRHLH---EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 M + + ++ AL+ R L + S A + + + M+ L++E+ R + L+ + Sbjct: 79 MGEAKTAQLKAALEIGRRLLLAGGDERFLIRSPTDAAQLMQIEMSHLDQEQLRAICLDTK 138 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N++ +T++ G+++ + V E+ K + N+A++++ HNHPSG+ TPS D ++T ++ Sbjct: 139 NRVQKIQTVYIGSLHTSMVRIGEIFKEPIRLNSASIIVVHNHPSGDPTPSPEDVVVTRQI 198 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGL 147 ++A L+DI V DHL++G + S E GL Sbjct: 199 IEAGRLLDIDVLDHLVIGAGRFVSMRERGL 228 >UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus RepID=C7RDS9_ANAPD Length = 228 Score = 169 bits (429), Expect = 2e-41, Method: Composition-based stats. Identities = 48/138 (34%), Positives = 84/138 (60%) Query: 9 IQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFT 68 +Q + +R L + TS++ + + ++ L++E F + L+++N +IA E + Sbjct: 89 LQLGKRINERVLDKKIEKITSSKDVYDIMSPRLSNLKKEYFYAILLDSKNVIIAKEVISI 148 Query: 69 GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRV 128 G + T V+PREV K A+ +A +++L HNHPSG PS D LIT+RL +A ++DI+V Sbjct: 149 GDLGSTVVNPREVFKPAIKKSAKSMILVHNHPSGNPKPSTEDFLITDRLAEAGDILDIKV 208 Query: 129 PDHLIVGGNQVFSFAEHG 146 DH+++G + +SF + G Sbjct: 209 LDHIVIGNSSYYSFKKEG 226 >UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KQ45_9GAMM Length = 177 Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats. Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 1/147 (0%) Query: 2 TPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLI 61 TP ++ +I++AL L+ L A TS R++ L + E F L+L Q+ I Sbjct: 32 TPAQQRIIEKALALLESRLIN-SDALTSPVRVRQYCQLQLGHERDEHFACLFLTAQHHAI 90 Query: 62 AGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQAL 121 + E F G+I+ V+PR +++R L NAAAV+L HNHPSG PS ADR IT RL +AL Sbjct: 91 SFEIQFRGSIDGAAVYPRVIVRRCLELNAAAVILVHNHPSGVSEPSPADRQITVRLQRAL 150 Query: 122 GLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L+D+RV DHLIV SFA+ GLL Sbjct: 151 ELIDVRVVDHLIVSAGDATSFAQAGLL 177 >UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SK46_9CAUL Length = 244 Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats. Identities = 51/144 (35%), Positives = 85/144 (59%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 + L+ A + L + +S +A +L + +A RE+FR+L+L+ +NQLIA E Sbjct: 101 DLQLMFEATRRLMAEPLKRSTVISSWQALLSYLRVTLAHEPREQFRLLFLDKKNQLIADE 160 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 + GT++ +PRE+++RAL +A++V+L HNHPSG+ PS+ D +T+ + A + Sbjct: 161 IMNYGTVDHAPAYPREIMRRALELSASSVILVHNHPSGDPMPSQGDIDMTKANIAAGKPL 220 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 I + DHLIVG V S + G + Sbjct: 221 KIAIHDHLIVGREGVLSMKQVGAI 244 >UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSS5_SYNAS Length = 308 Score = 169 bits (428), Expect = 3e-41, Method: Composition-based stats. Identities = 55/142 (38%), Positives = 84/142 (59%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 +++ + + T ++ + GL+ E F VLYL+ QN++IA ET+ Sbjct: 165 RMVKEMSALYLQEKAREKPQISCTGELLDFCKTALGGLKDENFCVLYLDTQNRIIAFETI 224 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 G +N+ V+PR+VI+RAL H ++A++L HNHPSG V PS AD +T + L+DI Sbjct: 225 QKGIVNQAVVYPRQVIERALSHKSSALILVHNHPSGFVKPSDADIRLTRTITDTAKLLDI 284 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 V DHLI+G N+ FSF E G++ Sbjct: 285 MVHDHLIIGENRFFSFREEGIM 306 >UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobacteria RepID=Y1607_AGRT5 Length = 280 Score = 168 bits (427), Expect = 4e-41, Method: Composition-based stats. Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 3/151 (1%) Query: 1 MTPG---ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + L+ + + + S + ++ MA RE+FR+L+L+ + Sbjct: 130 VGEAVALDLKLVASVSQRMLKSEIRNKQVLGSWSSVIDYCHAAMAHETREQFRILFLDKR 189 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N LIA E GT++ T V+PRE+++RAL ++ A++L HNHPSG+ TPS+AD +T+ + Sbjct: 190 NVLIADEVQGQGTVDHTPVYPREIVRRALELSSTALILIHNHPSGDPTPSRADIEMTKTI 249 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + + I V DH+I+G + SF L+ Sbjct: 250 IDTAKPLGITVHDHIIIGKDGHASFKGLRLI 280 >UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepID=Y2926_ENTFA Length = 232 Score = 168 bits (427), Expect = 4e-41, Method: Composition-based stats. Identities = 46/151 (30%), Positives = 86/151 (56%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAF---TSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + ++ A++ R + F TS++ + L+ M GL++E +YLN + Sbjct: 79 IGQVKAIELRAAIELGCRIYQSSQIKFGKVTSSQQVAQRLLQEMKGLQQEHLICIYLNTK 138 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N +I +T+F G++N++ HPRE+ + A+ +++A ++LAHNHPSG TPS D T+R+ Sbjct: 139 NDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDIQFTKRM 198 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + ++ I++ DH+I+G + S E Sbjct: 199 EECGEMMGIQLLDHIILGDSGYISLREENFF 229 >UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5M2_9BACL Length = 162 Score = 168 bits (426), Expect = 5e-41, Method: Composition-based stats. Identities = 49/149 (32%), Positives = 86/149 (57%), Gaps = 1/149 (0%) Query: 1 MTPGERSLIQRALKTLDRHLH-EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQ 59 + P R ++ L+ + + + E + + + ++ GL++E F +L LN +N+ Sbjct: 14 LPPRRRKQAEKLLELIRKVMEGEKDHYIHTPADVFQAVATDLVGLDKEHFMILILNTKNR 73 Query: 60 LIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQ 119 +++ E + GT+N VHPREV K A+ AA+++ HNHPSG+ PS D+ +TERL+Q Sbjct: 74 ILSKEVISIGTLNSAIVHPREVFKPAIIKGAASIICVHNHPSGDPAPSSEDKKLTERLIQ 133 Query: 120 ALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A ++ I V DH+++G S E G++ Sbjct: 134 AGEIIGIDVLDHVVIGTEGYVSLKEQGMI 162 >UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes RepID=Y1642_SYNWW Length = 235 Score = 167 bits (425), Expect = 7e-41, Method: Composition-based stats. Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 6/154 (3%) Query: 1 MTPGERSLIQRALKTLDRHL--HEPGVAFTSTRAA----REWLILNMAGLEREEFRVLYL 54 + + I+ A++ R + + S RE + M +RE FRVLYL Sbjct: 82 IGMAKAVSIKAAIEMGRRVVGNIQLRRIIKSPEDVQEAVRELAMEEMRHYDREHFRVLYL 141 Query: 55 NNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLIT 114 + + LI + + G ++ + VHPREV K A+ +AA+++L HNHPSG+ TPS+ D IT Sbjct: 142 DRKGGLITMQDISIGGLHSSIVHPREVFKTAVKKSAASMILVHNHPSGDPTPSQEDIEIT 201 Query: 115 ERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 RL++A ++ I + DH+I+G S GL+ Sbjct: 202 RRLIEAGKIMGIEILDHVIIGEINYCSLKARGLI 235 >UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9I2_9FIRM Length = 224 Score = 167 bits (424), Expect = 1e-40, Method: Composition-based stats. Identities = 57/150 (38%), Positives = 86/150 (57%), Gaps = 2/150 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVA--FTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 MT + +I +L+ R + T + L +M+ L+ E F+V+ LN +N Sbjct: 75 MTDLKCDMILASLEIGRRAYLKKEKQKIITCVMDIVDLLSYDMSFLDEEHFKVILLNTKN 134 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 +I E + GTIN + VH REV + A+ NA +++LAHNHPSG+ TPS D +T+RL Sbjct: 135 MVIETELISIGTINTSLVHVREVFRNAIKKNANSIILAHNHPSGDSTPSIEDEHLTKRLK 194 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A L+ I+V DH+I+G + FSF E +L Sbjct: 195 DAGELIGIKVIDHVIIGKDNYFSFMEENML 224 >UniRef50_B1HKP9 DNA repair protein n=1 Tax=Burkholderia pseudomallei S13 RepID=B1HKP9_BURPS Length = 165 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 63/148 (42%), Positives = 93/148 (62%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 +T E LI A+ L+R L + G A TS + A ++L L M +RE F V++L+ +++ Sbjct: 18 LTSAEHQLIHDAIAVLERRLFQRGPALTSPQNAIDYLRLTMTREDREVFTVIFLDTHHRV 77 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 IA E LF G I+ + R ++ RA+ N+ A+++AHNHPSGE PS AD+ +T L Sbjct: 78 IAVEPLFYGGIDGAHISSRVILHRAILLNSTAIIVAHNHPSGETQPSPADQRLTAELAAL 137 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L LVD+R+ DH I+G + FSFA+ GLL Sbjct: 138 LRLVDMRLLDHFIIGRGEPFSFAQAGLL 165 >UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobacteria RepID=Y056_PSYIN Length = 225 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 60/151 (39%), Positives = 93/151 (61%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + +Q L+ R+L EP G A TS + +LI M L E F + L+ Q Sbjct: 75 LGQAKYVQLQAVLEMSSRYLQEPLSKGNALTSAAQTKAFLIAKMHNLPYEVFAAILLDTQ 134 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 +++I F G+I+ VHPR + ++ L NAAA++L HNHPSG+ + S+AD++IT+++ Sbjct: 135 HRIIRFHEFFFGSIDCATVHPRIIAQKVLSENAAAIILVHNHPSGDPSASEADKMITQKI 194 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 V AL L+D+RV DHL+VG + SFAE+G + Sbjct: 195 VSALQLIDVRVLDHLVVGHKKCTSFAENGWI 225 >UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Y852_LACSS Length = 224 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 52/151 (34%), Positives = 86/151 (56%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAF---TSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + +Q + R ++ + F S++ + +I ++AG +E+ +YL+ + Sbjct: 72 IGPVKAIELQAICELSRRIQNQRTLRFGVVASSQMVGQRMIESLAGETQEQLLAVYLDVK 131 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 NQ+I + L+ GT+N + HPREV K A+ ++AA +L HNHPSG++ PS D T+R+ Sbjct: 132 NQIIQIKQLYLGTLNSSVAHPREVFKWAVQYSAAKFILVHNHPSGQLAPSTQDINFTKRI 191 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 V L+ I DHLI+G +Q S E G L Sbjct: 192 VNCGQLMGITCLDHLIIGSSQYLSLREEGYL 222 >UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales RepID=Q2G8R8_NOVAD Length = 245 Score = 166 bits (422), Expect = 1e-40, Method: Composition-based stats. Identities = 50/147 (34%), Positives = 87/147 (59%) Query: 2 TPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLI 61 + ++ A + L R + ++ +A ++L ++MA L E RVLYLN+QN LI Sbjct: 99 SAAALRIVALAARRLARTVVREQPILSNWQALLDYLHIDMAHLTVERVRVLYLNSQNMLI 158 Query: 62 AGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQAL 121 + GT++ + ++ REVI++A+ AAA++L HNHPSG PS+AD +T+++++A Sbjct: 159 LDHLVSEGTLDESPIYTREVIRKAMDVGAAAMILVHNHPSGSPKPSRADIQVTQKVMEAA 218 Query: 122 GLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L+ + V DH+++G S GL+ Sbjct: 219 RLMGMTVHDHIVIGREGHTSLKAQGLI 245 >UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacteria RepID=B0T9R6_CAUSK Length = 253 Score = 166 bits (422), Expect = 1e-40, Method: Composition-based stats. Identities = 61/125 (48%), Positives = 84/125 (67%) Query: 24 GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIK 83 +S A ++L L MA ERE FRVL+L+ +NQLIA E L GT++ V+PREV++ Sbjct: 129 RCVVSSWTALIDYLKLTMAHCEREAFRVLFLDKKNQLIADEILNHGTVDHAPVYPREVVR 188 Query: 84 RALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFA 143 RAL +A+AV+L HNHPSG+ TPS AD +T+++V A + I V DH+IVG +V SF Sbjct: 189 RALEVSASAVILVHNHPSGDQTPSSADIEMTKKVVDAARTLGIAVHDHVIVGRAEVASFK 248 Query: 144 EHGLL 148 GL+ Sbjct: 249 ALGLI 253 >UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales RepID=C6LCB9_9FIRM Length = 231 Score = 166 bits (422), Expect = 1e-40, Method: Composition-based stats. Identities = 48/151 (31%), Positives = 85/151 (56%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQ---RALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + IQ + + + + G FTS +A ++ + + L++E +L + + Sbjct: 80 VGKVKAVQIQCITELSRRIAKSVASEGNTFTSAQAIADYYMEDFRHLQQERVFLLSFDTK 139 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 +L++ +T+ GT+N++ V PRE+ AL A V+L HNHPSG PS DRL+T R+ Sbjct: 140 GELLSEKTISVGTVNQSCVSPREIFLEALSCRAVYVILLHNHPSGNPQPSPEDRLLTMRV 199 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++ L++I + DH+I+G + FSF E G + Sbjct: 200 HESGKLLEIPLMDHIILGDRRYFSFREEGFI 230 >UniRef50_A3ER13 DNA repair protein (RadC) n=3 Tax=Leptospirillum RepID=A3ER13_9BACT Length = 237 Score = 166 bits (422), Expect = 2e-40, Method: Composition-based stats. Identities = 48/151 (31%), Positives = 76/151 (50%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDR---HLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 M + + I ++ R S R + L + ++E F VL L+ + Sbjct: 81 MGLAKAAQIMAGIELGRRVSGKARSFRPEIRSARDVYDILGARLRDEKKESFWVLLLDQR 140 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++L + G+++ T VHPRE + A+ +AAAV+ HNHPSG+ PS D +TERL Sbjct: 141 HRLQNAVRISEGSLSMTLVHPREAFQPAIRDSAAAVLFVHNHPSGDPEPSSDDWSLTERL 200 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + L+ IRV DH+++G + S E G L Sbjct: 201 KECGELLGIRVLDHVVLGDHAWVSLEERGGL 231 >UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=A1K759_AZOSB Length = 196 Score = 166 bits (422), Expect = 2e-40, Method: Composition-based stats. Identities = 62/150 (41%), Positives = 87/150 (58%), Gaps = 4/150 (2%) Query: 2 TPGERSLIQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 TP + + A++ L R E S R++L G E F VLYL+ QN Sbjct: 48 TPAWDA-LACAIEILHRSFAEQLSARNVLDSPGVVRQFLRTFFEGKPYEIFVVLYLDAQN 106 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 +LI E F GT+ +T V+PRE+++R+L +AA V+ +H HPSG PS AD ++T L Sbjct: 107 RLIRAEEAFRGTLTQTSVYPREILRRSLELHAAGVIFSHQHPSGVCEPSSADEVLTNMLK 166 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 AL LVD+RV DH++V G++ SFAE G L Sbjct: 167 SALTLVDVRVLDHIVVAGDRAVSFAETGRL 196 >UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVJ8_9FIRM Length = 236 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 53/151 (35%), Positives = 88/151 (58%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRAL---KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + ++I AL + L+ TS A ++++ +M LE E FR++ LN + Sbjct: 85 VGQAKAAMIMAALTLAERLNSSSIYDKKKITSPEDAAKYVMASMRDLETEVFRIIILNTK 144 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++ + G IN T VHPREV ++A+ A +++L HNHP+G+ +PS+ DR +T RL Sbjct: 145 KEIKYIREISHGIINMTVVHPREVFRQAISDGAHSIILLHNHPTGDPSPSQEDRNLTRRL 204 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 V+ +V I + DH+I+G N FSF + G+L Sbjct: 205 VEVSKIVGIDICDHIIIGDNTFFSFLKEGIL 235 >UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium RepID=Y547_CLOBA Length = 229 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 46/150 (30%), Positives = 81/150 (54%), Gaps = 4/150 (2%) Query: 3 PGERSLIQRALKTLDR----HLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 G+ S I + R + + S + M+ L++E +V++LN +N Sbjct: 80 EGKASQILALAELFRRFRTFKSADRDIKIMSPNDIAMLINGEMSLLKQEILKVIFLNTKN 139 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 +I + +F G++N + VHPRE+ K A+ ++ +++ HNHPSG+ TPSK D IT R+ Sbjct: 140 IVIGTKDVFKGSLNTSIVHPREIFKEAVNKSSTKIIICHNHPSGDPTPSKEDINITLRIK 199 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + ++ I++ DH+I+G N S E G + Sbjct: 200 ECGEIMGIQLLDHIIIGKNGFISLKEKGFI 229 >UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacteria RepID=Q3JDF2_NITOC Length = 171 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 69/146 (47%), Positives = 93/146 (63%), Gaps = 1/146 (0%) Query: 3 PGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIA 62 P ++SL++ A L LH+PGV S R++L + +A + E F LYL+N++++I Sbjct: 27 PEKQSLLELAFAVL-HDLHQPGVELPSPNHTRDFLRMLLAERKAEVFGCLYLDNRHRVIE 85 Query: 63 GETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALG 122 LF GTI+ V+PR V+++AL NAAAV+ HNHPSG PS AD IT RL +AL Sbjct: 86 TVELFQGTIDGASVYPRVVVQQALSVNAAAVMFFHNHPSGVAEPSNADEAITRRLKEALA 145 Query: 123 LVDIRVPDHLIVGGNQVFSFAEHGLL 148 LVDIRV DH +V + SFAE GLL Sbjct: 146 LVDIRVLDHFVVTAGESISFAERGLL 171 >UniRef50_A7HJG0 DNA repair protein RadC n=3 Tax=Thermotogaceae RepID=A7HJG0_FERNB Length = 225 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 43/149 (28%), Positives = 80/149 (53%), Gaps = 6/149 (4%) Query: 1 MTPGERSLIQRALKTLDRHLHEP----GVAFTSTRAAREWLILNMAGLEREEFRVLYLNN 56 + + + AL+ R + E TS ++ I M +E RV++L+ Sbjct: 70 LGDVKIVTLMAALELAKRLVKEETVILDPKLTSPENVFQYCID-MQSYPQEIVRVIFLDT 128 Query: 57 QNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITER 116 + ++I + + GTIN + HPR++ + A+ ++ ++LAHNHPSG+ TPSK D +T++ Sbjct: 129 KLKVIGSKDVSKGTINSSMAHPRDIFREAILRSSTGIILAHNHPSGDPTPSKDDIELTKK 188 Query: 117 LVQALGLVDIRVPDHLIVGGNQVFSFAEH 145 + +A L+ I + DH+I+G +S + Sbjct: 189 IKKAGELLGINLHDHVIIGQ-TFYSLRQK 216 >UniRef50_C4Z083 DNA repair protein RadC n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z083_EUBE2 Length = 230 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 3/151 (1%) Query: 1 MTPGERSLI---QRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + I + + + + F++ + + +M LE+E ++ L+N+ Sbjct: 79 IGKAKAVQICCILELSRRIAKQKARERLDFSNAETIAGYYMEDMRHLEKEHLVLVMLDNR 138 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 +LI + L GT + V RE+ K AL + AA+VVL HNHPSG +PS+ D +T + Sbjct: 139 CRLIRDKVLSVGTSTGSMVSVREIFKEALDNRAASVVLLHNHPSGNPSPSREDMKVTRSV 198 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++A ++ I + DH+++G N FSF + + Sbjct: 199 MEAGKIIGIELLDHIVIGDNSYFSFKQMQYI 229 >UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia RepID=B4CZF8_9BACT Length = 231 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 7/155 (4%) Query: 1 MTPGERSLIQRALKTLDRHLHEP--GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 + P + + A R E S + L M L RE R++ L+ + Sbjct: 77 VGPAKAVQLVAAFGLASRLARETLARQRLDSPELINDLLGPEMRALGRESLRLVLLDTKY 136 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 LI E + G++N + HPREV + AL ++A AV+L HNHPSG+ TPS AD +T RLV Sbjct: 137 LLIRVEEISHGSLNESIAHPREVFRPALIYSAYAVILVHNHPSGDPTPSSADHQLTRRLV 196 Query: 119 QALGLVDIRVPDHLIVGGNQ-----VFSFAEHGLL 148 Q L+ IR+ DH+I+G FSF E G++ Sbjct: 197 QGAELLQIRLLDHVILGTGDNGRLPYFSFKEAGII 231 >UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes RepID=Y413_FLAJ1 Length = 229 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 52/151 (34%), Positives = 82/151 (54%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHE---PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + I AL+ R E TS++ A + + L EEF VL+LNN Sbjct: 79 IGEAKAVSIVAALELGRRQRAEDILKLKKITSSKDAFTIMQPIIGELPHEEFWVLFLNNS 138 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N++I+ L G I T V R V K L + A ++L HNHPSGE+ PS+AD+ IT+++ Sbjct: 139 NKVISKAQLSKGGIAGTIVDVRLVFKLGLENGATGLILCHNHPSGELNPSQADKQITKKI 198 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A ++D+++ DHLI+ + +SF + G+ Sbjct: 199 KTAGEILDVKILDHLIITETKYYSFVDEGIF 229 >UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae RepID=Y1235_THEP1 Length = 222 Score = 165 bits (419), Expect = 3e-40, Method: Composition-based stats. Identities = 57/151 (37%), Positives = 84/151 (55%), Gaps = 4/151 (2%) Query: 1 MTPGERSLIQRALK---TLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + ++ AL+ L R L S+ + M LERE +V+ L+ + Sbjct: 73 VGMVKAITLKAALELGKRLHRELERIPEKLDSSVKVYRYCQ-EMVYLEREIVKVICLDTK 131 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 +I TL GT +R+ +HPR+V + A+ NA+ V++ HNHPSG+ TPSK DRLITERL Sbjct: 132 LNVIGENTLTVGTSDRSLIHPRDVFRTAIRANASGVIVVHNHPSGDPTPSKEDRLITERL 191 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 QA ++ + + DH+IV FSF E G L Sbjct: 192 KQAGEILGVSLVDHVIVSRRGYFSFREEGEL 222 >UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A699_NATTJ Length = 241 Score = 165 bits (419), Expect = 3e-40, Method: Composition-based stats. Identities = 48/151 (31%), Positives = 78/151 (51%), Gaps = 4/151 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHEPG---VAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + ++ A + +R + TS + + RE F + LN + Sbjct: 91 IGYAKSIKLKAAFELANRCMAREQLTMDKITSPEDIFRLMNFRLKTETREHFLAVMLNTK 150 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 + L+ + + G++N T VHPREV RA+ +A V+L HNHPSG+ PS+ D +T RL Sbjct: 151 SYLLKIDLISIGSLNATIVHPREVFNRAIRASACGVILVHNHPSGDPEPSQDDIKLTNRL 210 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSF-AEHGL 147 V A L+ I + DH+I+G + +SF E+ L Sbjct: 211 VAAGDLLGIPIMDHVIIGHQKFYSFSRENHL 241 >UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185C66E Length = 221 Score = 165 bits (418), Expect = 5e-40, Method: Composition-based stats. Identities = 51/144 (35%), Positives = 73/144 (50%), Gaps = 3/144 (2%) Query: 1 MTPGERSLIQRALKTLDRHL---HEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + I A + R HEP + R + + L EEF VLYLN+ Sbjct: 75 IGEAKAITILAATEMGRRRAAETHEPQPKIEAPRHVFTLMQPLIGDLPHEEFWVLYLNSA 134 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N++I L +G I T V R + K AL A +++L HNHPSG TPSK D +TER+ Sbjct: 135 NRVIHKCRLSSGGITHTTVDIRLLFKNALEQGAVSLILVHNHPSGSTTPSKEDLELTERV 194 Query: 118 VQALGLVDIRVPDHLIVGGNQVFS 141 A +DI++ DH+IV + +S Sbjct: 195 RNAGDTLDIKLLDHIIVTEKEYYS 218 >UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobacteria RepID=Y1917_THICR Length = 225 Score = 164 bits (417), Expect = 6e-40, Method: Composition-based stats. Identities = 60/152 (39%), Positives = 89/152 (58%), Gaps = 4/152 (2%) Query: 1 MTPGERSLIQRALKTLDRHLH---EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + ++ L+ RH + G A T L ++ RE F ++ L+ Q Sbjct: 74 LGQAKYVQLKAVLEMSRRHFESGLKKGEALTQPEKVARLLQHHIGHQSREIFGLVLLDQQ 133 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 NQ I LFTGTIN+ VH REV+K L H+AAAV+LAHNHPSG+ TPS++DR +T ++ Sbjct: 134 NQFIQFVPLFTGTINQATVHIREVLKTVLDHHAAAVILAHNHPSGDPTPSQSDRDLTHQI 193 Query: 118 VQALGLVDIRVPDHLIVGG-NQVFSFAEHGLL 148 Q L L++ R DH+I+G + +SF + G+L Sbjct: 194 QQGLQLIETRCLDHIILGDHGRWYSFTQQGIL 225 >UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLJ1_9FIRM Length = 233 Score = 164 bits (417), Expect = 6e-40, Method: Composition-based stats. Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALK---TLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + + + L R + F+S R ++ + +M RE ++++LN + Sbjct: 81 IGKVKAIQLVCLSELSKRLARTSTVGKLDFSSPRTIADYYMEDMRHRTREILKLIFLNTR 140 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 +LI + GTI+ V PRE+ A NA ++L HNHP G+ TPS+ D +IT R+ Sbjct: 141 CRLIGECNVSEGTIDSALVSPRELFIEAFKRNAYGIILLHNHPGGDPTPSREDVMITRRI 200 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A L+ IR+ DH+++G N S E G Sbjct: 201 YEAGELLGIRLFDHIVIGDNCFVSMKEKGFF 231 >UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organisms RepID=A5FRP1_DEHSB Length = 228 Score = 164 bits (417), Expect = 6e-40, Method: Composition-based stats. Identities = 48/151 (31%), Positives = 78/151 (51%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGV---AFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + ++ A + R G + + + + ++E F L L+ + Sbjct: 78 IGLAKACQLKAAFELAKRAGGIKGEYQPCIKTPEDVFQIIYPLVCDEKKEYFFCLMLDVK 137 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++LI + G++ + VHPREV K AL +AA+V+LAHNHPSG+ PS D ++ RL Sbjct: 138 SRLIRVGHISVGSLEESVVHPREVFKEALSASAASVILAHNHPSGDTEPSHDDIGLSARL 197 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A G++ I V DH+I+GG S GLL Sbjct: 198 REAGGIMGIEVLDHIIIGGQSFTSLKRQGLL 228 >UniRef50_C9LLN8 DNA repair protein RadC n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLN8_9FIRM Length = 227 Score = 164 bits (417), Expect = 6e-40, Method: Composition-based stats. Identities = 41/152 (26%), Positives = 77/152 (50%), Gaps = 4/152 (2%) Query: 1 MTPGERSLIQRALKTLDR----HLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNN 56 + + + A++ R H + F+ A + + + ++E F V +LN Sbjct: 76 VGQDKAITVCAAVELGRRLAQFHNKKQLENFSFPEAVASYFMEKLRHEDQEHFIVCFLNT 135 Query: 57 QNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITER 116 +N+L+ + + G+++ V +E ++ AL A ++L HNHPSG PS AD +T + Sbjct: 136 KNRLLGYKEICVGSLDAAPVDIKEAMRWALRFKAHGMILVHNHPSGYPEPSDADINLTRQ 195 Query: 117 LVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A DIR+ DH+I+G + S ++GL+ Sbjct: 196 FRRATSFFDIRLLDHVIIGDGEFASLNKNGLV 227 >UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. DG881 RepID=B4X5D3_9GAMM Length = 164 Score = 164 bits (416), Expect = 7e-40, Method: Composition-based stats. Identities = 56/125 (44%), Positives = 83/125 (66%) Query: 24 GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIK 83 A T+ ++L + +A + E F ++LNN++++++ E LF+GTI+ V+PR V++ Sbjct: 40 REALTAPTDVAQFLQMALAQEKNEVFAAIFLNNKHKVLSFEPLFSGTIDGAAVYPRVVVQ 99 Query: 84 RALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFA 143 +AL NAAAV+ AHNHPSG PS+ADR IT RL AL L+D+RV DH +V ++ S A Sbjct: 100 QALACNAAAVIFAHNHPSGCCEPSQADRTITTRLKDALALIDVRVLDHFVVSRSEWVSLA 159 Query: 144 EHGLL 148 E G L Sbjct: 160 ERGWL 164 >UniRef50_B5V5B9 RadC n=5 Tax=Firmicutes RepID=B5V5B9_BACCE Length = 168 Score = 164 bits (416), Expect = 7e-40, Method: Composition-based stats. Identities = 53/146 (36%), Positives = 76/146 (52%) Query: 3 PGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIA 62 P +R I + + L S A + G +RE F VL L+ +NQ Sbjct: 23 PAKRVDIVKLKMIKESSLLYKERRVKSPEDASLLFRQFLDGADREYFIVLCLDIKNQPTT 82 Query: 63 GETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALG 122 G++N + VHPREV+K A+ NAA++++AHNHPS + TPS D +T+RL++A Sbjct: 83 INVCHIGSLNSSIVHPREVLKPAIISNAASIIVAHNHPSNDPTPSSEDLEVTKRLIEAGK 142 Query: 123 LVDIRVPDHLIVGGNQVFSFAEHGLL 148 +V I V DHLIV S E G + Sbjct: 143 VVGIEVLDHLIVCEESFVSLKEKGYM 168 >UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5ZRS6_9FIRM Length = 236 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 48/151 (31%), Positives = 78/151 (51%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQ---RALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + ++ K + + F S + + + + E+E + L+NQ Sbjct: 81 IGTVKAVQLKCIGELSKRIASTAARISLDFNSPDSIAAYYMEQLRHQEQEIMICMMLDNQ 140 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N L+ L GT+N T + PREV AL ++A ++L HNHP G PSK D+ ITER+ Sbjct: 141 NHLLGDTMLSKGTVNATLITPREVYLEALRYHAVNLILIHNHPGGNPAPSKCDKEITERI 200 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 QA ++ I + DH+I+G ++ SF E GL+ Sbjct: 201 CQAGEMLGINLLDHIIIGDHRYISFREEGLM 231 >UniRef50_Q3AF80 UPF0758 protein CHY_0341 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Y341_CARHZ Length = 226 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 43/135 (31%), Positives = 70/135 (51%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 + E + F + +L + ++E+ VLYLN +NQL + G +N Sbjct: 92 RRYYELTGENKLNFLNPDDVYNYLRYKIGHKKQEQVVVLYLNTKNQLCGENIVAIGGVNH 151 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 V P ++ + A+ A AV++AHNHPSG+ TPSK D T R+ +A ++ I++ DH+I Sbjct: 152 AGVSPGDIFREAVKIGAYAVIIAHNHPSGDPTPSKEDIDFTGRVKKASEILGIKLLDHII 211 Query: 134 VGGNQVFSFAEHGLL 148 +G N+ S L Sbjct: 212 LGENKYISMKAERLF 226 >UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S8K4_HAHCH Length = 207 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 65/143 (45%), Positives = 91/143 (63%), Gaps = 2/143 (1%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 +I A LD G AF A + +L+L +A E+E F ++L+NQN+LI+ E L Sbjct: 64 KIISIAKHILDGRFFR-GKAFCDPDATKYYLVLQLAEHEQEVFACMFLDNQNRLISFEKL 122 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 F GTI++ V+PRE++KRAL NAAAV+LAHNHPSG PS AD +T+ + +L L+D+ Sbjct: 123 FYGTIDQASVYPREIVKRALMLNAAAVILAHNHPSGMSEPSVADIAMTKTVKSSLALIDV 182 Query: 127 RVPDHLIVG-GNQVFSFAEHGLL 148 RV DH++VG SF E G + Sbjct: 183 RVLDHIVVGSDGSSVSFIERGYM 205 >UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y7_9BURK Length = 198 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 74/144 (51%), Positives = 97/144 (67%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 + S+ + L R G S + ++WL + AGLE E F VLYL+ Q LI E Sbjct: 55 KLSIARELLLRNMRSKMLEGPVMASPKVVKDWLSMYCAGLEHEVFLVLYLDAQQVLIEAE 114 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GT+ +T V+PREV+K AL HNAAAV+LAHNHPSG+++PS AD L+T+ L +L +V Sbjct: 115 ELFRGTLTQTSVYPREVVKNALAHNAAAVLLAHNHPSGQLSPSGADELLTQTLKSSLMMV 174 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 D+RV DH IVGG++V SFAE GLL Sbjct: 175 DVRVLDHFIVGGDRVLSFAEQGLL 198 >UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S9N8_PROA2 Length = 165 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 56/125 (44%), Positives = 79/125 (63%), Gaps = 1/125 (0%) Query: 25 VAFTSTRAAREWL-ILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIK 83 A T A ++ + + EEF LYL+ +N++I E + GT+N + VHPREV K Sbjct: 41 PAITRCDIAYDFFCKIGLQDKASEEFYALYLDTKNKIIGLEMISRGTLNASLVHPREVFK 100 Query: 84 RALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFA 143 A NA +++LAHNHPSG PS AD+L+T RLV+A L+D++V DH+IVG +SF Sbjct: 101 GAFLANANSIMLAHNHPSGNTEPSSADKLVTSRLVKAGKLLDLQVLDHIIVGDKGYYSFR 160 Query: 144 EHGLL 148 E GL+ Sbjct: 161 ESGLI 165 >UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B8H5_9BACI Length = 228 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 49/142 (34%), Positives = 79/142 (55%), Gaps = 2/142 (1%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 + I A K ++ S A + + ++E F VL L+ ++QLI+ + + Sbjct: 89 ATILFAKK-INSMFMPEVECLRSPEDAYHAVK-YLTNEDQETFVVLALDTKHQLISRKEI 146 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 + GTI+ VHPREV + AL +AA +++AH HPSG +PS+ D +T+RL + + I Sbjct: 147 YKGTIDAAIVHPREVFRFALNKSAAHIIVAHQHPSGNCSPSRDDIEVTKRLRKVGEEIGI 206 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 + DH+IVG N+ FS + G L Sbjct: 207 PLSDHIIVGRNKYFSMKKQGHL 228 >UniRef50_B0RXB0 DNA repair protein radC homolog n=3 Tax=Xanthomonas campestris pv. campestris str. B100 RepID=B0RXB0_XANCB Length = 159 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 67/140 (47%), Positives = 91/140 (65%), Gaps = 1/140 (0%) Query: 8 LIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLF 67 ++ A L++ L G S A +L+ A L E F V++L+NQ+ ++A E LF Sbjct: 20 ILLAAATILEQRLQRQG-RIHSPDQAGSYLVARCAHLSHEIFGVVFLDNQHHILAAEHLF 78 Query: 68 TGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIR 127 +GTI+ E+HPR V KRAL NAAAV+L HNHPSG PS+ADR +T+RL +ALGL+DIR Sbjct: 79 SGTIDGCEIHPRVVAKRALELNAAAVILFHNHPSGNPEPSEADRKVTQRLQEALGLLDIR 138 Query: 128 VPDHLIVGGNQVFSFAEHGL 147 V DHL++GG + S A G Sbjct: 139 VLDHLVIGGQKSVSLAARGW 158 >UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9S4_9DELT Length = 227 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 48/151 (31%), Positives = 78/151 (51%), Gaps = 3/151 (1%) Query: 1 MTPGERS---LIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + L Q + G + + + EEF +++++ Sbjct: 77 IGPAAVAHWALTQELFARMGEARTRSGAPLSDPAEVARAAMARIGSKGVEEFWAAFMDSK 136 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N++IA E + GT++ T V PRE++ AL AAA++LAHNHP G+ TPS+ D +T R+ Sbjct: 137 NRVIAWEQVSKGTVDATPVFPREIMVTALRLEAAALILAHNHPGGDPTPSREDLDLTRRI 196 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + IR+ DH+IV ++ +SF EHG L Sbjct: 197 RDTAQGLGIRILDHIIVTDHEYYSFNEHGRL 227 >UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M9C6_CAPOD Length = 225 Score = 163 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 52/151 (34%), Positives = 74/151 (49%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHE---PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + I A + R E P + + L EEF VLYLN+ Sbjct: 75 IGQAKAITILAATEMGRRRAAETPEPQPKIEVAHNVFVLMQPLIGELPHEEFWVLYLNST 134 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N++I LF+G I T V R + K AL A A++L HNHPSG TPSK D +T+R+ Sbjct: 135 NRVIHKARLFSGGITHTTVDVRLLFKTALEQGAIALILVHNHPSGSTTPSKEDIELTQRV 194 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A ++DI++ DH+IV + SF + L Sbjct: 195 KTAGEMLDIKLLDHVIVTEKEYLSFLDERLF 225 >UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus RepID=D2RM81_ACIFE Length = 220 Score = 163 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDR---HLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + ++I AL+ R P ++ + E F V+ LN++ Sbjct: 70 IGPAKATVILAALELGRRLAGAGTRPFRTIHCPEDGAMLVMPRLRYENHEHFLVVLLNSK 129 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++I E + G++N + VHPRE AL H+AAA++ HNHPSG+ TPS+ DR +T L Sbjct: 130 GKVIGIEPVSEGSLNASVVHPREAFAPALLHHAAAILAVHNHPSGDPTPSREDRELTRTL 189 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++ I + DHLI+G +SF EHGLL Sbjct: 190 WDTGKVMGIPLVDHLIIGDGVYYSFKEHGLL 220 >UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9Z9_DESAH Length = 279 Score = 163 bits (414), Expect = 2e-39, Method: Composition-based stats. Identities = 54/151 (35%), Positives = 82/151 (54%), Gaps = 3/151 (1%) Query: 1 MTPGE---RSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P LI+ ++ +L + RE F ++L+ + Sbjct: 117 VGPSNVLGIKLIKAVSDRYLEQRIRSKTVLKNSHDLCAFLGHAIGHRPREVFVGIFLDAK 176 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N+++A E LF G+++ + V+PREVI +AL H AAA++ AHNHPSGE +PS D IT RL Sbjct: 177 NRVLASEILFEGSLSSSAVYPREVIAKALEHRAAALIFAHNHPSGETSPSPEDLAITRRL 236 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 AL I V +HLI GG + +SFA+ G++ Sbjct: 237 FFALAHAGITVHEHLITGGERFYSFADQGII 267 >UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2URH1_AKKM8 Length = 246 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 44/150 (29%), Positives = 76/150 (50%), Gaps = 8/150 (5%) Query: 1 MTPGERSLIQRALKTLDRHLHEP--GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 + + + + A + R L E + ++L M E+E VL L+ + Sbjct: 78 IGMAKAATLSAAFELGARALRETLSRQPIQTPEDVYDYLTTAMRWKEKETVLVLLLDTKC 137 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 +LI + +GT+N + HPR++++ + HNA +LAHNHPSG PS+ D L+TER+ Sbjct: 138 RLIKPVEISSGTLNESIAHPRDILRPTVIHNAYGFILAHNHPSGNPAPSRTDDLLTERVR 197 Query: 119 QALGLVDIRVPDHLIVGG------NQVFSF 142 + L+ +R DH+I+G +S+ Sbjct: 198 ECSKLLGVRFLDHVIIGKPTETTNKNYYSY 227 >UniRef50_B7ANR2 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ANR2_9BACE Length = 246 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 43/151 (28%), Positives = 77/151 (50%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRAL---KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + I + + + + + F + + ++ + ++ E E ++ L+ + Sbjct: 92 IGSVKALQIMAVIELSRRISKSCAYRRLDFRNPVSIADYYMEDLRHAECERLVLVMLDTK 151 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 +LI E + TGT+N + V PRE+ AL A +V+ HNHPSG+ PS D IT R+ Sbjct: 152 LRLIKDEIISTGTVNASIVSPREIFVAALRAGAVFIVMLHNHPSGDAEPSSNDIAITRRV 211 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A ++ I + DH+I+G N+ S E GL+ Sbjct: 212 QLAGEMLGISLIDHIIIGDNRFVSLKESGLM 242 >UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q042N7_LACGA Length = 206 Score = 162 bits (412), Expect = 2e-39, Method: Composition-based stats. Identities = 47/146 (32%), Positives = 81/146 (55%) Query: 3 PGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIA 62 ++Q L+ + ++ + S+ ++ + G +EE +YL+++N++IA Sbjct: 61 DEIAVVLQLMLERVKGVNNKEIESLYSSSQVGCYIADKLCGRPQEELYGIYLDSKNKIIA 120 Query: 63 GETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALG 122 + +F GT+NR HPR++ + A+ +N+ A +AHNHPSG+ PS+ D T++LV+A Sbjct: 121 EKLIFQGTVNRAVAHPRDIFRWAVIYNSTAFFVAHNHPSGDEQPSQHDLRFTKKLVEASK 180 Query: 123 LVDIRVPDHLIVGGNQVFSFAEHGLL 148 + I DH IV N SF E LL Sbjct: 181 CMGIDFLDHFIVTDNTYLSFREMELL 206 >UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q1WT78_LACS1 Length = 225 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 46/149 (30%), Positives = 85/149 (57%), Gaps = 3/149 (2%) Query: 3 PGERSLIQRALKTLDRHLHEPGVAFT---STRAAREWLILNMAGLEREEFRVLYLNNQNQ 59 + ++I+ + +R+ + G+ S+ ++I + ++E + L+ +NQ Sbjct: 75 DEKVAIIRALREFSERYKEKEGLVLGQIFSSCMFGNYMIDKIGDSKQELLVCVCLDTKNQ 134 Query: 60 LIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQ 119 +++ + +F GT+N VHPRE+ K AL + A +++AHNHPSG V PS+ D +T+RL+ Sbjct: 135 VLSEKVIFKGTLNSATVHPREIFKHALNFSCARILVAHNHPSGNVEPSENDIQLTKRLIN 194 Query: 120 ALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A ++ I + DH+IVG S AE ++ Sbjct: 195 AGKMIGIELIDHVIVGSEVYLSLAEEKIV 223 >UniRef50_A6Q5Q5 DNA repair protein RadC n=2 Tax=unclassified Epsilonproteobacteria RepID=A6Q5Q5_NITSB Length = 220 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 1/148 (0%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 + + + I A++ R+L + S E L ++E F YL+ N++ Sbjct: 74 LGIAKAAQIVSAVELSKRYLFKQHKTVISANDVYEELKEYF-DKKQEYFIAFYLDGANRI 132 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 + GT+N++ VHPREV A+ A++++AHNHPS +TPS+ D L+T++L Q+ Sbjct: 133 CEKRVITIGTLNQSLVHPREVFAPAIESRCASIIVAHNHPSNNLTPSREDILVTQKLKQS 192 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++ I + DH+I S E G+L Sbjct: 193 GKILGIELLDHIIFSKEGFVSLQEEGIL 220 >UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7M6_9FIRM Length = 228 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 55/138 (39%), Positives = 79/138 (57%) Query: 11 RALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGT 70 + + + A WL + G ++E F +YL+ +N ++ LF GT Sbjct: 90 ELARRISEEQTREIDVVANPDALMAWLGREIGGKQQEHFLAIYLDAKNHILEHRLLFKGT 149 Query: 71 INRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPD 130 ++ + VHPREV K AL +A V++ HNHPS ++TPS ADR+IT+RL + L+ I + D Sbjct: 150 LDASIVHPREVFKEALLASACRVLVVHNHPSQDLTPSLADRIITQRLKETGELIGIELLD 209 Query: 131 HLIVGGNQVFSFAEHGLL 148 HLIVG Q FSF HGLL Sbjct: 210 HLIVGTTQYFSFRAHGLL 227 >UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9V0_9FIRM Length = 224 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 52/150 (34%), Positives = 80/150 (53%), Gaps = 2/150 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGV--AFTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 + + + +++ R + EW + +E F LYL+ ++ Sbjct: 74 IREVKALQLLASVELSKRVIKSKVYHAPILKPEDVIEWFKFEYGTMSQECFIALYLDTKS 133 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 +LI+ LF GT+N + VHPREV K A NA +V++AHNHPSG+ TPSKAD +T ++V Sbjct: 134 KLISHRVLFKGTLNESVVHPREVFKEAFLQNANSVLIAHNHPSGDCTPSKADFEVTYKMV 193 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + + + DH+IV NQ +SF EH L Sbjct: 194 HVAMTMGVCLVDHIIVCKNQYYSFKEHKYL 223 >UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magna RepID=Y357_FINM2 Length = 223 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 3/146 (2%) Query: 1 MTPGERSLIQRALKTLDR---HLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + + I ++ R + + E + + E F L L+ + Sbjct: 73 IGMAKATSILAGIEIGRRLSLRKAMDSFSLNDPDSVAEIFCNEIGSCDVENFYALLLDTK 132 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N++I+ E + GTIN++ VHPREV K A+ A +++L HNHPSG + PS AD +T+RL Sbjct: 133 NRIISKELISKGTINQSIVHPREVFKSAIKKGANSIILVHNHPSGSLIPSNADIEVTKRL 192 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFA 143 + LV I+V DH+IV N S Sbjct: 193 DKVGDLVGIQVLDHIIVSSNDSLSMR 218 >UniRef50_C0GE80 DNA repair protein RadC n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GE80_9FIRM Length = 189 Score = 162 bits (410), Expect = 4e-39, Method: Composition-based stats. Identities = 50/151 (33%), Positives = 79/151 (52%), Gaps = 5/151 (3%) Query: 1 MTPGERSLIQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + ++ L + L EP + S E +A E E L+LN + Sbjct: 41 LGPRKAKQLKAVFD-LSKALLEPDDTSITIQSPADVFENFK-YLALHEEEYLVALFLNTK 98 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N+++ T+ GT+N + +HPREV A+ A+VV+ HNHPSG+ TPS+ D IT+RL Sbjct: 99 NKILQHTTISKGTLNTSLIHPREVFAPAIRIKCASVVILHNHPSGDPTPSREDIDITKRL 158 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A ++ I + DH+++G S E LL Sbjct: 159 KEAGKIIGIELLDHIVIGNKGFVSLREKSLL 189 >UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0FF1E Length = 213 Score = 162 bits (410), Expect = 4e-39, Method: Composition-based stats. Identities = 59/151 (39%), Positives = 88/151 (58%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDR---HLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + Q ++ R E + S ++ + I + +E F V LNNQ Sbjct: 62 VGPQKYKRCQAVVELHKRTGAQHVERMMKLDSVDESKAFFISQLQYYPQERFAVALLNNQ 121 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++ + + LF+GTIN V+PRE++K AL +NAA V+LAHNHPSG PS+AD IT+R+ Sbjct: 122 HEFLHYKELFSGTINAASVYPREIVKYALDYNAANVILAHNHPSGTPEPSQADIAITQRI 181 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 QAL L+D++V DH++VG S A+ G L Sbjct: 182 RQALDLIDVQVLDHIVVGAGNAVSLAQRGCL 212 >UniRef50_B1JAY7 DNA repair protein RadC n=4 Tax=Pseudomonas RepID=B1JAY7_PSEPW Length = 164 Score = 162 bits (410), Expect = 4e-39, Method: Composition-based stats. Identities = 61/144 (42%), Positives = 94/144 (65%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E +LI AL+ LD+ + G + A +L L +A E F +L L++++++++ + Sbjct: 21 EDALITGALQLLDQRHFQRGEVLITPADAAAYLKLQLAPYHHEVFALLCLDSRHRVLSFD 80 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LFTG+I+ V+PR+V+ +AL NAAAV+ +HNHPSG PS ADR++T RL +AL LV Sbjct: 81 ILFTGSIDGASVYPRQVVIKALERNAAAVIFSHNHPSGCSEPSGADRVLTTRLTEALALV 140 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 ++RV DH+IVG S AE+G + Sbjct: 141 EVRVLDHIIVGEGTPLSLAEYGWM 164 >UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus jensenii RepID=C2E2B4_9LACO Length = 207 Score = 162 bits (410), Expect = 4e-39, Method: Composition-based stats. Identities = 49/136 (36%), Positives = 83/136 (61%) Query: 13 LKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTIN 72 LK L + F S+ ++LI G+E+E+ V+YL+N+N+++ LF GT+N Sbjct: 72 LKRLKAVRTRKLIQFVSSHEVGKYLIDRFLGVEQEQLVVIYLDNKNKVLGERLLFQGTVN 131 Query: 73 RTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHL 132 R+ VHPR++ + A+++N+ +++AHNHPSG+ PS+ D T+++ +A L+ I DH+ Sbjct: 132 RSVVHPRDIFRWAVFYNSVGILIAHNHPSGDANPSQKDIEFTKQINKASDLMGINFLDHI 191 Query: 133 IVGGNQVFSFAEHGLL 148 IV SF E L+ Sbjct: 192 IVADRSYLSFKEEQLI 207 >UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon GZfos29E12 RepID=Q64AS5_9ARCH Length = 403 Score = 161 bits (409), Expect = 5e-39, Method: Composition-based stats. Identities = 42/143 (29%), Positives = 76/143 (53%), Gaps = 4/143 (2%) Query: 1 MTPGERSLIQRALKTLDRH----LHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNN 56 + + I + RH + V + + + ++E F L L++ Sbjct: 253 IGFAKACQIIALFEFNKRHNKAVKTKEIVTIEKPEDVYNYFVDELKDKKKEHFYALLLDS 312 Query: 57 QNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITER 116 +N+LI + + GT++ + VHPREV K A+ ++AA V+L HNHPSG+ PS+ D IT++ Sbjct: 313 KNKLIKKDLVSVGTLDNSLVHPREVFKEAIKNSAAGVILVHNHPSGDPEPSENDVEITQK 372 Query: 117 LVQALGLVDIRVPDHLIVGGNQV 139 + +A +++I+V DH+I+ Sbjct: 373 IAKAGNILNIKVLDHVIIAEKGW 395 >UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BYC2_DESAD Length = 225 Score = 161 bits (409), Expect = 5e-39, Method: Composition-based stats. Identities = 47/134 (35%), Positives = 74/134 (55%) Query: 15 TLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRT 74 + A +S + + + L +EEF + +NN+N++I E L GT+++T Sbjct: 92 RIAEEPMNGKEAISSPDVVYKAAMARIGNLSKEEFWIALVNNRNKVICWERLSEGTVDKT 151 Query: 75 EVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIV 134 V+PREV+ AL HNA+ V+L HNHP G+ +PS D T + ++IR+ DH+IV Sbjct: 152 AVYPREVVALALRHNASGVILTHNHPGGDPSPSPEDTERTMEIAALCQDMEIRLLDHVIV 211 Query: 135 GGNQVFSFAEHGLL 148 ++ SF E G L Sbjct: 212 TADRFHSFKEAGYL 225 >UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LCX8_9BACT Length = 228 Score = 161 bits (409), Expect = 6e-39, Method: Composition-based stats. Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVA---FTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + I A + R EP + + + EEF ++LN + Sbjct: 77 IGPAKAITILAACELGRRRAEEPAEQRPLMDGPQKIYSFFRQRLEDTPHEEFHAMFLNRR 136 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 QL++ + G + T V R + +AL A A+ + HNHPSG PS+AD +T+++ Sbjct: 137 LQLVSEALIGRGGLTETTVDVRLLFGKALEAKATALAICHNHPSGNPRPSQADDRLTQKV 196 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 QA L+DIR+ DH+IV +S+ E G L Sbjct: 197 AQAARLLDIRLVDHIIVADKCYYSYQEEGKL 227 >UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter oxydans RepID=Q5FNC4_GLUOX Length = 216 Score = 161 bits (408), Expect = 7e-39, Method: Composition-based stats. Identities = 55/142 (38%), Positives = 82/142 (57%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 ++Q A +R P + + ++L +A E+FR+L+LN +N LIA E Sbjct: 75 RVLQEAALRYNRARLPPEDVLDNEQKLLDYLTARLARENIEQFRILFLNEKNSLIADEAQ 134 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 GT+N T V+PREV +RA+ A A+VL HNHPSG+ TPS+AD +T ++ AL +V + Sbjct: 135 ARGTVNHTPVYPREVARRAVEIGATALVLVHNHPSGDPTPSEADLQMTMQVQAALEVVGV 194 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 + DH I+G + SF LL Sbjct: 195 TIADHFIIGNGRHTSFRRSNLL 216 >UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID=Y2409_LEGPL Length = 227 Score = 161 bits (408), Expect = 7e-39, Method: Composition-based stats. Identities = 58/151 (38%), Positives = 91/151 (60%), Gaps = 4/151 (2%) Query: 1 MTPGERSLIQRALKTLDRHL---HEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + +Q A + R + + ++T+ +L + + E F L+L+NQ Sbjct: 74 LGEVRYAQLQAAKEICHRSDFIDLQKEIRLSNTQQTYAFLKKRLRDYKNETFAALFLDNQ 133 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 +++IA E LF+GTIN V+PR +++R L NAAA++LAHNHPSG S+ D ITER+ Sbjct: 134 HRIIAYEELFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDASQQDLAITERI 193 Query: 118 VQALGLVDIRVPDHLIVGGNQVFS-FAEHGL 147 AL LVD R+ DH+++G N+V+S FAE+ Sbjct: 194 RDALDLVDARLLDHIVIGDNEVYSIFAENKW 224 >UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae RepID=C4LDH2_TOLAT Length = 165 Score = 161 bits (408), Expect = 7e-39, Method: Composition-based stats. Identities = 64/144 (44%), Positives = 91/144 (63%), Gaps = 1/144 (0%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E+ ++ A + L ++ G + +A +L M E E F L+L+NQ+++I E Sbjct: 23 EKDILIMA-RRLAKNRLAKGCSIERPSSAFIYLQALMGNYENEVFGSLFLDNQHRIICFE 81 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GT+N T +HPREV+KRAL NAAAV+ HNHPSGE PS+AD+ IT +L + L L+ Sbjct: 82 ELFRGTLNVTNIHPREVVKRALAVNAAAVIFVHNHPSGEPEPSEADKKITVQLRETLNLI 141 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 D+RV DH++VG S AE GL+ Sbjct: 142 DVRVLDHIVVGAKACISMAERGLV 165 >UniRef50_D1QST5 DNA repair protein RadC n=13 Tax=Bacteroidales RepID=D1QST5_9BACT Length = 234 Score = 161 bits (407), Expect = 9e-39, Method: Composition-based stats. Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRH---LHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + I A + R E + S++A E+L M L+ EE V+ LN Sbjct: 84 VGPAKAITILAACELGKRRAMEKAEERQSIDSSKAIYEYLHPRMQDLDVEEAWVMLLNQH 143 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 +LI + G I+ T V R ++K AL NA + LAHNHPS PS D +T+R+ Sbjct: 144 YKLIKALRISHGGISETAVDVRIILKEALLCNATVLALAHNHPSNHAQPSGPDDQLTQRV 203 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A + I DH+I+ +S+ + G L Sbjct: 204 KKACEALRIYFLDHVIITDGTYYSYHDSGRL 234 >UniRef50_C7GE95 DNA repair protein RadC n=2 Tax=Roseburia RepID=C7GE95_9FIRM Length = 243 Score = 161 bits (407), Expect = 9e-39, Method: Composition-based stats. Identities = 42/151 (27%), Positives = 79/151 (52%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALK---TLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + ++ + + + P V T+ R ++ + ++ +E V +N+ Sbjct: 91 IGPIKAIQLKCIAELSKRIAQTKSAPNVCMTNPRTIADYYMEHLRHENKEHLIVCMFDNK 150 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 + + L G+ N T V PREV + A+ +AA ++L HNHPSG PS AD ++T+R+ Sbjct: 151 CHMKGDKLLSVGSANETIVSPREVFETAINCHAAHLILVHNHPSGIPEPSHADDVVTKRI 210 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + L+ I + DH+I+G + FS+ E+ + Sbjct: 211 LNCGQLMGIPLSDHVIIGDHSYFSYRENNRI 241 >UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYN9_9FIRM Length = 230 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + + AL+ R + A + ++E F + LN Sbjct: 74 IGEAKAMRLIAALELGKRQSEISVNIKRKIGNPEAIFHLFHEKLRYEKKENFYAVMLNTA 133 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 +IA E + G + HPREV K A+ A++V+L HNHPSG VTPS D LIT+RL Sbjct: 134 KHVIAKERISIGGLACAYAHPREVFKSAIKKAASSVILVHNHPSGCVTPSDEDVLITKRL 193 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + A ++ I V DH+I+G S + G + Sbjct: 194 INAGRIIGIEVIDHIIIGNENYLSMKKEGYI 224 >UniRef50_B1I0K4 DNA repair protein radC-like protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0K4_LYSSC Length = 204 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 44/144 (30%), Positives = 84/144 (58%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 ++ LK ++ + ++ A E+++ M L++E F L+L+ ++++I E Sbjct: 61 RIRAVKGLLKIMNSERQGKVKSISNASEAAEYVMDEMKNLKQEHFVCLFLDTRSRVIKKE 120 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 T+F G++N + PRE+++ AL ++AA ++ HNH SG+ PS D +T RL +A L+ Sbjct: 121 TIFIGSLNSSIASPREIMRLALKYSAAGIICLHNHCSGDSEPSMQDLEVTRRLFEAGDLM 180 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 + + DH+++G N+ S E+ LL Sbjct: 181 GVELIDHIVIGNNEFTSIRENNLL 204 >UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNR3_HIRBI Length = 272 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 78/135 (57%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 + + ++ A + + + E+FRVL+L+++NQLIA E GTIN Sbjct: 138 QRCSLEEVKARPIISNWGALLSHVRIALQHETEEQFRVLFLDHKNQLIADERQSQGTINH 197 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 V+PRE+ KRAL +A+A++L HNHPSG+ TPS+AD +T ++ A ++I + DHLI Sbjct: 198 APVYPRELAKRALELSASALILVHNHPSGDPTPSRADIDVTREIMDAFEPLEITIHDHLI 257 Query: 134 VGGNQVFSFAEHGLL 148 VG + S L+ Sbjct: 258 VGKKGITSLKAKNLI 272 >UniRef50_D1W0Q6 Putative DNA repair protein RadC n=2 Tax=Prevotella RepID=D1W0Q6_9BACT Length = 259 Score = 160 bits (405), Expect = 1e-38, Method: Composition-based stats. Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 3/149 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVA---FTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + I A + R E +S A E++ M L+ EE +L +N + Sbjct: 108 IGPAKAITILAACELGKRRAMEKAEERADLSSALAIYEYMHPRMQDLDVEEAWILLMNQR 167 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 +LI + G I+ T V R +++ A+ NA + L HNHPS + PS D +T+R+ Sbjct: 168 YKLIKAMRISHGGISETAVDVRVIMREAVLSNATVLALCHNHPSNQAFPSTEDDRLTKRI 227 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHG 146 +A L+ I DH+IV + +S+ E G Sbjct: 228 HEASQLMRIYFLDHIIVTDGRYYSYREEG 256 >UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepID=Y3149_BORPD Length = 225 Score = 160 bits (405), Expect = 1e-38, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 84/151 (55%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + + L+ R E A + + + + +A E LYL++Q Sbjct: 75 LGAAKAGTLAAILELARRAAEERLMRQQAMSEPGSVKRYFKTALANCAVEHCLALYLDSQ 134 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 LI L GT+ R V+PREV++ AL H+AAA++LAHNHPSG PS+ADR T + Sbjct: 135 LNLITSGELARGTLARASVYPREVVREALRHHAAALILAHNHPSGSAQPSQADRDFTRHM 194 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 QAL LV+IR+ DHLIV G+ V S AE GLL Sbjct: 195 QQALALVEIRLLDHLIVAGDTVVSMAELGLL 225 >UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiaceae RepID=Y1761_CHLPD Length = 223 Score = 160 bits (405), Expect = 1e-38, Method: Composition-based stats. Identities = 56/150 (37%), Positives = 82/150 (54%), Gaps = 2/150 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPG--VAFTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 + + I + R + S R E++ + + +E VL+LN +N Sbjct: 73 IGQAKAMQIIAVFELNKRIHYSRNLQRKVLSARDVFEYMAGRVPDITKEHLFVLHLNTKN 132 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 Q+I E + GT+N + HPREV K A+ +A A++L HNHPSG+V PS ADR +TE L Sbjct: 133 QIIRNEQVTVGTLNASLAHPREVFKSAIRESAHAIILVHNHPSGDVEPSNADRQVTEILR 192 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 QA + I + DH+I+G + FSF EH LL Sbjct: 193 QAGSFLQIDLLDHVIIGVDTWFSFREHSLL 222 >UniRef50_C6E4Z0 DNA repair protein RadC n=3 Tax=Geobacter RepID=C6E4Z0_GEOSM Length = 167 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 51/127 (40%), Positives = 78/127 (61%), Gaps = 2/127 (1%) Query: 20 LHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPR 79 +P +TS + + +E F L+L+ +N+++ + + TG++N++ VHPR Sbjct: 41 YLKPNTRYTSASQVFDTF-TFLRHETKEHFIALHLDGKNRIVCIDMVSTGSLNQSIVHPR 99 Query: 80 EVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQV 139 E+ K AL +AAAV+L HNHP+G+ TPS D IT RL +A L+ IRV DH+I+G N Sbjct: 100 ELFKTALLSSAAAVILLHNHPTGDPTPSTEDLTITRRLQEAGELIGIRVLDHIIIGDN-Y 158 Query: 140 FSFAEHG 146 +SF E G Sbjct: 159 YSFTERG 165 >UniRef50_C4SWK5 DNA repair protein n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4SWK5_YERIN Length = 152 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 68/144 (47%), Positives = 95/144 (65%), Gaps = 1/144 (0%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E ++Q+A ++ G ST A RE+L +A LE E F VL L+NQ++++A E Sbjct: 10 EDLILQQAQSIIENRYIR-GDKMFSTEAVREYLKFKLAPLEHEVFSVLLLDNQHRILAYE 68 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GT+N ++PRE++K +L +NA A++L HNHPSGE PS AD+ IT +L LGL+ Sbjct: 69 ELFRGTLNAVSIYPREIVKLSLRYNAGAIILVHNHPSGEPEPSHADKEITNKLKSVLGLL 128 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 D++V DHLIV G QV S AE GL+ Sbjct: 129 DVQVLDHLIVAGTQVVSLAERGLV 152 >UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Haemophilus ducreyi RepID=Q7VMM9_HAEDU Length = 157 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 60/155 (38%), Positives = 94/155 (60%), Gaps = 7/155 (4%) Query: 1 MTPGERSLIQRALKTLDRHLHEPG-------VAFTSTRAAREWLILNMAGLEREEFRVLY 53 ++ + ++ +A + L E G +F + A E+ + + ERE F VL+ Sbjct: 3 LSTQHQDMLNQAKALYENVLRETGIRSYASNPSFGDEKEASEYCQMQLGFEEREVFGVLF 62 Query: 54 LNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLI 113 + QN+LI E LF GTIN+ +HPRE++K+AL N++AV+L HNHPSG+VTPS++D+ Sbjct: 63 WDTQNRLIRFEKLFFGTINQASIHPREIVKKALELNSSAVILTHNHPSGQVTPSQSDKQT 122 Query: 114 TERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 T ++ QA L+D+ V DH+IV +SF H L+ Sbjct: 123 TAKIKQACQLIDVNVLDHIIVSATDTYSFCMHQLM 157 >UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z2T6_9GAMM Length = 223 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 54/141 (38%), Positives = 80/141 (56%), Gaps = 1/141 (0%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 + A + + L E + ++L + RE F L+L+ Q QL+A + Sbjct: 80 CALLLATRLAEEELFERSP-LKDPGSCYKYLQHHYLLQSREVFTCLFLDTQRQLLACRDM 138 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 F GT+N V+PRE++ AL A+A+++AHNHPSG + PS AD +T+RL +ALGL+DI Sbjct: 139 FFGTLNTAPVYPREIVAMALKMGASAIIVAHNHPSGCLAPSVADIQLTDRLRRALGLIDI 198 Query: 127 RVPDHLIVGGNQVFSFAEHGL 147 + DHLIV + S A GL Sbjct: 199 DLLDHLIVAQGRYLSMASEGL 219 >UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrionales RepID=C4XRP2_DESMR Length = 228 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 47/134 (35%), Positives = 69/134 (51%) Query: 15 TLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRT 74 S E + E EEF + ++ +N+L+ E + GT+++ Sbjct: 95 RFHEQPMRDRAVLGSPDVVAEMARARIGVKEHEEFWMALVDTKNRLVGWERVSKGTVDQA 154 Query: 75 EVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIV 134 V+PREVI AL +NA+ V+L HNHP + PS D T R+V A +DIRV DHL+V Sbjct: 155 AVYPREVIAMALRYNASGVILVHNHPGADPKPSAEDMAFTRRIVAAAREMDIRVLDHLVV 214 Query: 135 GGNQVFSFAEHGLL 148 N+ FSF G++ Sbjct: 215 TENRFFSFQAEGMI 228 >UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepID=C4V569_9FIRM Length = 225 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 52/150 (34%), Positives = 76/150 (50%), Gaps = 2/150 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPG--VAFTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 + + + + AL+ R L RE F VL L+ +N Sbjct: 76 IGSAKAATVLAALELGRRAYAGTRGMPRMNEAADVAALLSARCQAERREHFFVLPLSAKN 135 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 +++ + TGT+ T VHPREV + A+ +AA +++AHNHPSG+ PS D +T L Sbjct: 136 EVLMIADVSTGTLTNTLVHPREVFEPAIRCSAAHIIIAHNHPSGDPAPSAEDHRLTRSLH 195 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A L+ I V DH+IV + FSFAE GLL Sbjct: 196 EAGALLGIPVADHVIVARDGFFSFAEAGLL 225 >UniRef50_Q5DY97 DNA repair protein RadC n=17 Tax=Proteobacteria RepID=Q5DY97_VIBF1 Length = 165 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 87/148 (58%), Gaps = 1/148 (0%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 T E+ ++ A ++ + A TS A E + + ERE F +L L+NQ++L Sbjct: 19 FTENEKMILAEAASIIEVKIRNTS-ALTSPDLAAELCVNRLVHQEREVFAILMLDNQHRL 77 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 I G+I+ V+PREV+K L++NAAAV+ AHNHPSG PS ADR IT RL A Sbjct: 78 IKFVEHSVGSISSASVYPREVLKSVLHYNAAAVIFAHNHPSGVAEPSDADRRITARLSSA 137 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L L+D++V DH ++G + SFA+ G + Sbjct: 138 LELIDVKVLDHFVIGVGETVSFAKRGWI 165 >UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HJN5_GLUDA Length = 221 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 55/141 (39%), Positives = 81/141 (57%) Query: 8 LIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLF 67 L++ A L R G + A +L ++A E+FRVL+L+ +LIA E L Sbjct: 81 LLREAAIRLMRARIRQGDLLSCHDALMAYLQASLARDTVEQFRVLFLDRGTRLIADEVLA 140 Query: 68 TGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIR 127 GTI++T V+PREV++RA+ A+ ++L HNHP TPS+ D +T RL Q ++ + Sbjct: 141 QGTIDQTPVYPREVMRRAIQLKASELILVHNHPGWNPTPSREDIAMTRRLAQIATVLGLT 200 Query: 128 VPDHLIVGGNQVFSFAEHGLL 148 V DH+IVG SF + GLL Sbjct: 201 VRDHVIVGNGASISFRQAGLL 221 >UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C7TC16_LACRG Length = 222 Score = 159 bits (403), Expect = 2e-38, Method: Composition-based stats. Identities = 43/146 (29%), Positives = 77/146 (52%), Gaps = 3/146 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGV---AFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + +R+ I ++ R + V ++ + ++ AG +E +L+L+ + Sbjct: 70 LGAAKRASILAGVELGRRVMRRQSVRYGQIKNSEQLGKTMVSRFAGANQESMLILFLDVK 129 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 NQ+I + + GT++ PR V + AL +A +++ HNHPSG+ +PS+ADR T R Sbjct: 130 NQIITEQIVAIGTVDSALADPRVVFREALKLSATNLIMVHNHPSGDPSPSQADRDTTTRF 189 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFA 143 A L+ + + DHLI+G +SFA Sbjct: 190 QLAAALLGMHLLDHLIIGRQSYYSFA 215 >UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC32AB Length = 227 Score = 159 bits (403), Expect = 2e-38, Method: Composition-based stats. Identities = 48/140 (34%), Positives = 77/140 (55%) Query: 9 IQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFT 68 I + + F +++ A ++ + + LE E F VL LN + +LI + L Sbjct: 88 IGELSSRISKATMAKRTVFNTSKDAADYCMEELRHLEYECFMVLLLNTKCELINEKILSM 147 Query: 69 GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRV 128 GT+N T + REV + AL A +++ HNHPSG+ TPS+ D L T++L +A LV I + Sbjct: 148 GTVNYTCITSREVYRYALSKGAVYIIVVHNHPSGDPTPSREDSLCTKKLKEAGELVGIPL 207 Query: 129 PDHLIVGGNQVFSFAEHGLL 148 DH+I+G N+ S E ++ Sbjct: 208 IDHIIIGDNRYISLKEQDMI 227 >UniRef50_A9IEU5 Putative DNA repair protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IEU5_BORPD Length = 174 Score = 159 bits (403), Expect = 2e-38, Method: Composition-based stats. Identities = 60/148 (40%), Positives = 89/148 (60%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 M P +R+ I + L G ++ A+ +L L +AGLE E ++ L+ Q +L Sbjct: 27 MRPAQRAEILAVARELVSIDTLHGEDLSNPDKAKAFLQLRLAGLEHEVCALMLLDVQLRL 86 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 I F GT+++ V+PRE++K AL HNAA +++AHNHPSG S+ADR +T+ + QA Sbjct: 87 ITYLEPFRGTLSQAPVYPREILKLALRHNAAGLMMAHNHPSGLAEASQADRQLTQAVQQA 146 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L L+D+R+ DH IV G V S A+ G L Sbjct: 147 LALIDVRLLDHFIVAGTTVVSMAQRGQL 174 >UniRef50_C3WF45 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WF45_FUSMR Length = 154 Score = 159 bits (403), Expect = 2e-38, Method: Composition-based stats. Identities = 56/149 (37%), Positives = 92/149 (61%), Gaps = 2/149 (1%) Query: 2 TPGERSLIQRALKTLDRHLHEPGV--AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQ 59 E ++ + + + + + E+L +N++ EEF++L+LNN N+ Sbjct: 6 GTQEIEELKELIHYISKEGIKRRDLTTIKNKENLLEFLKINLSPRNNEEFKILFLNNANK 65 Query: 60 LIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQ 119 LIA +TLF GTI+++ V+PR V++ L +N+A V+LAHNHPSG + PSK D +TE L + Sbjct: 66 LIAEKTLFYGTIDKSAVYPRVVLEEVLRYNSAGVILAHNHPSGNLRPSKQDIQLTEALQE 125 Query: 120 ALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L +++ V DH+I+G ++ FSF E GL+ Sbjct: 126 LLEKINVMVLDHMIIGDDEYFSFREEGLI 154 >UniRef50_A8YUM9 DNA repair protein RadC n=9 Tax=Lactobacillus RepID=A8YUM9_LACH4 Length = 207 Score = 159 bits (403), Expect = 3e-38, Method: Composition-based stats. Identities = 43/143 (30%), Positives = 77/143 (53%) Query: 6 RSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGET 65 + + L + S+ +L + G ++EE LY++N N+++A + Sbjct: 65 AITAEEVMDRLRMASSKRKPVLASSVEVGTYLADKLVGHKQEELWALYVDNGNRIVAEKK 124 Query: 66 LFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVD 125 +F GT+N++ HPRE+ + A+ ++ + + +AHNHPSG++ PS D +T+ L +A ++ Sbjct: 125 IFQGTLNKSVAHPREIFRWAVIYDCSGIFIAHNHPSGKLIPSSNDFELTKDLYRAAKMMK 184 Query: 126 IRVPDHLIVGGNQVFSFAEHGLL 148 I + DH IVG Q S E L Sbjct: 185 IDLLDHFIVGQGQYLSMREKELF 207 >UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMV6_9DELT Length = 226 Score = 159 bits (402), Expect = 3e-38, Method: Composition-based stats. Identities = 43/134 (32%), Positives = 68/134 (50%) Query: 15 TLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRT 74 DR S + EEF + ++N+N+LI E + GT+++ Sbjct: 93 RTDRSGLSTRSTLDSPEKVARLARSRLQFKSIEEFWAIMVDNKNRLIDFEKMSRGTVDQA 152 Query: 75 EVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIV 134 V PRE++ AL A+ V+L HNHP G+ PS DR +T ++ + + +R+ DH+I+ Sbjct: 153 PVFPREILTVALEKRASGVILLHNHPGGDPHPSFQDRELTRKIREVSTALGVRLLDHVII 212 Query: 135 GGNQVFSFAEHGLL 148 + FSF EHG L Sbjct: 213 SEDSFFSFQEHGFL 226 >UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=C0R2T1_WOLWR Length = 224 Score = 159 bits (402), Expect = 3e-38, Method: Composition-based stats. Identities = 45/140 (32%), Positives = 83/140 (59%) Query: 9 IQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFT 68 +++A R + + ++L +++ L +E FRV+Y+N + +LIA + Sbjct: 85 VKQAFVRSAREEIKDLPIIDNWEKLLDYLRISIGSLNKENFRVIYMNKKYRLIAEDLQNI 144 Query: 69 GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRV 128 GT+++T ++ RE+IKRAL + ++V++HNHPS + PS +D +T +L +A + I + Sbjct: 145 GTVDQTPLYVREIIKRALLIGSTSIVISHNHPSRDTQPSNSDISLTRQLAEACQSIGIEL 204 Query: 129 PDHLIVGGNQVFSFAEHGLL 148 DH+I+ + FSF E+ LL Sbjct: 205 IDHIIITFSSYFSFKENRLL 224 >UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes RepID=C0BM81_9BACT Length = 231 Score = 159 bits (402), Expect = 4e-38, Method: Composition-based stats. Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVA---FTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + I+ +L R LH +S+ AA L + GL EEF VLYL+N Sbjct: 81 VGKVKAIKIKASLDFGYRLLHVNATVPLSLSSSGAAFSILKPVLIGLTYEEFWVLYLDNS 140 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N LI L G T V R V+++A+ A A+++AHNHP+G + PS +D+ +T++L Sbjct: 141 NVLIERSLLGKGGFTATVVDIRLVLQQAIRWGATAMIVAHNHPTGNLKPSHSDKALTQKL 200 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A ++DI++ DH+IVG N+ FSFA+ LL Sbjct: 201 KEAAKVLDIKLLDHIIVGKNEYFSFADQNLL 231 >UniRef50_Q03R16 DNA repair protein n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03R16_LACBA Length = 220 Score = 159 bits (402), Expect = 4e-38, Method: Composition-based stats. Identities = 49/150 (32%), Positives = 80/150 (53%), Gaps = 3/150 (2%) Query: 2 TPGERSLIQRALKTLDRHLHEPGVAFTS---TRAAREWLILNMAGLEREEFRVLYLNNQN 58 +R + A++ P + + L+ ++ L +E+ VL L+ Q+ Sbjct: 57 GNRQRQALLTAIELGRWAEKAPRPILGEVLASSQLGQVLMDDLRYLLQEQLEVLALDAQH 116 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 ++I +T+F GT+N VHPRE+ + A+ AA V++AHNHPSG+ PS +DR +RL Sbjct: 117 RIIERQTVFQGTLNSCPVHPREIFRVAVMSGAATVIVAHNHPSGQPQPSTSDRAFMQRLA 176 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L+ I + D +VG + FSF E G+L Sbjct: 177 ACGQLMGIPLLDGFVVGLHSYFSFKEAGIL 206 >UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales RepID=A9KL05_CLOPH Length = 232 Score = 158 bits (401), Expect = 5e-38, Method: Composition-based stats. Identities = 43/151 (28%), Positives = 84/151 (55%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALK---TLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + + + + + G+ +T + E+ + +M L+ E+ R+L + + Sbjct: 81 IGRVKAIQLLCLTELSIRMAKATFADGIRYTDPSSVAEYYMQDMRSLKTEQSRLLMFDTK 140 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++L+ E + GT+N + + PREV A+ + A ++L HNHPSG+ TPSK D +T+R+ Sbjct: 141 SKLLREEIISIGTVNASIMSPREVFLLAVKYEAVYIILLHNHPSGDPTPSKEDIAVTKRM 200 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A L+ + + DH+I+G N+ S E G++ Sbjct: 201 KEAGELLGVTLMDHIIIGDNRYISLKEQGII 231 >UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepID=B2V8J4_SULSY Length = 229 Score = 158 bits (400), Expect = 6e-38, Method: Composition-based stats. Identities = 45/149 (30%), Positives = 77/149 (51%), Gaps = 2/149 (1%) Query: 1 MTPGERSLIQRALKTLDR-HLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQ 59 + + I ++ R H + TS A +L ++ +E LYLN+ N Sbjct: 82 IGEAKALQILAIIEIAKRMDDHAEKIKITSVSDAFNYLKF-LSKETQEHMVALYLNSSNH 140 Query: 60 LIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQ 119 LIA E + G++N V PR+++ A+ HN ++++HNHP+ + TPS+ D T++L Sbjct: 141 LIAQEVIAKGSLNVVRVLPRDILYYAIKHNCNGIIISHNHPNNDPTPSQEDIEFTKKLQT 200 Query: 120 ALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + + DH+IVG +SFA+ GL+ Sbjct: 201 LANELGFDLLDHIIVGKKDFYSFAKAGLI 229 >UniRef50_C2KVW9 Possible DNA repair protein RadC n=1 Tax=Oribacterium sinus F0268 RepID=C2KVW9_9FIRM Length = 229 Score = 157 bits (399), Expect = 7e-38, Method: Composition-based stats. Identities = 44/139 (31%), Positives = 73/139 (52%) Query: 10 QRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTG 69 + A + +R + E +F S + ++ + L EE VL+L+ + QL+ L G Sbjct: 91 ELAKRIWNRKIREEVQSFRSPGSVLQYFKEELRHLSYEEVHVLFLDTKAQLLKDFLLSKG 150 Query: 70 TINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVP 129 + N + + RE+ AL + +L HNHPSG+ PS+ D TE + +A + I + Sbjct: 151 SSNASILSGREIFMEALRAASVCFILVHNHPSGDPHPSREDERATEEIYKAGEYLGIHLM 210 Query: 130 DHLIVGGNQVFSFAEHGLL 148 DH+I+G NQ +SF E G + Sbjct: 211 DHIIIGDNQYYSFKEQGKI 229 >UniRef50_C9NPT2 DNA repair protein RadC n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPT2_9VIBR Length = 224 Score = 157 bits (399), Expect = 7e-38, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 85/148 (57%), Gaps = 1/148 (0%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGV-AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQ 59 + +++++Q A + R+ + + + ++A ++RE F L+L+N + Sbjct: 76 FSAHDQAVLQEAKDIIARYWAARSPNVLNAPNLVKMYCQCHLAHVDREVFGALWLDNGLR 135 Query: 60 LIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQ 119 + LF G++N VH REV++ L NAAAV+ HNHPSG+ +PS+ADR +T L Sbjct: 136 ALGTVDLFAGSLNHAAVHTREVLRSGLRLNAAAVIFYHNHPSGDPSPSQADRQLTNHLKD 195 Query: 120 ALGLVDIRVPDHLIVGGNQVFSFAEHGL 147 LG ++IRV DH++V + V SFAE G Sbjct: 196 VLGQIEIRVLDHMVVSLSGVVSFAERGW 223 >UniRef50_A1B298 DNA repair protein RadC n=7 Tax=Bacteria RepID=A1B298_PARDP Length = 162 Score = 157 bits (399), Expect = 8e-38, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 88/148 (59%), Gaps = 2/148 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 + E++++ A + L RHL++ TS +A ++ L + G + E F VLYL+ +N+L Sbjct: 17 FSAQEQAVVYEARQILLRHLNQ-NPVLTSWQAVLDYCALTIRG-DVERFHVLYLDRRNRL 74 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 I+ E L GT++ V+PREV++R L NA+A+++ HNHP+G+ PS AD +T+ + A Sbjct: 75 ISDECLAIGTVDHVPVYPREVLRRCLALNASALIIVHNHPAGDPEPSAADFAMTKEIRNA 134 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + + + DH+I G + S G L Sbjct: 135 SASLGVILHDHIITGAGRETSLRARGEL 162 >UniRef50_Q02HM7 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa UCBPP-PA14 RepID=Q02HM7_PSEAB Length = 202 Score = 157 bits (399), Expect = 8e-38, Method: Composition-based stats. Identities = 62/144 (43%), Positives = 84/144 (58%), Gaps = 5/144 (3%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E L+QRA+ L+R + G S R R++L L + G E F ++L+ Q Sbjct: 64 EDQLVQRAIAVLERRMFRRGQELLSPRGLRQYLRLRLVGKSEEVFAAVFLDAQ-----WR 118 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GT+N ++ R V+KRAL HNA VV+AHNHPSG TPS+AD T +L AL LV Sbjct: 119 ALFRGTVNAAPMYARVVVKRALRHNAVGVVVAHNHPSGLATPSQADIAATRQLKAALNLV 178 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 DI + DH ++G + FSF + LL Sbjct: 179 DIELLDHFVIGRGEPFSFFDAQLL 202 >UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID=D2BJ47_DEHSV Length = 275 Score = 157 bits (398), Expect = 9e-38, Method: Composition-based stats. Identities = 52/141 (36%), Positives = 86/141 (60%) Query: 8 LIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLF 67 LI+ + + + + ++L M GL++E F+V+YL++Q++++ LF Sbjct: 102 LIREVSRRYLKDGIMEKPVCNTAQQVFDYLYCAMRGLKKEVFKVIYLDSQHRVLELADLF 161 Query: 68 TGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIR 127 TGT+ + PREVI A+ NA+A++ HNHPSG++ PS+AD+ +T LV A ++ IR Sbjct: 162 TGTVASGSIVPREVIAAAISQNASALIFVHNHPSGKIEPSQADKDVTRELVYAAMVMKIR 221 Query: 128 VPDHLIVGGNQVFSFAEHGLL 148 DH+I+G N FSFA G++ Sbjct: 222 ALDHIIIGDNCYFSFAAAGIM 242 >UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DAY3_MYXXD Length = 241 Score = 157 bits (398), Expect = 9e-38, Method: Composition-based stats. Identities = 46/120 (38%), Positives = 65/120 (54%) Query: 29 STRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYH 88 + + +L + L RE F VL N +N L+ + GT+N V PREV AL Sbjct: 104 TPKEIAAYLAPVLGALRREVFHVLCFNARNVLVHDARVAEGTMNTCPVDPREVFAAALTS 163 Query: 89 NAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A ++VLAHNHPSG+ PS D +T LV L++I+V DH+++G S E GL+ Sbjct: 164 RATSIVLAHNHPSGDPEPSVQDLGLTRHLVAGAQLLNIKVLDHVVMGDGGYVSMLERGLM 223 >UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter pasteurianus RepID=C7JGI7_ACEP3 Length = 249 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 52/151 (34%), Positives = 85/151 (56%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALK---TLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + R L+ A + + R + +L M +RE+ RVL+LN++ Sbjct: 99 LPEAVRVLLMLAREAGLRIQRARLRRSGILADSTQLYAYLRAVMGPEKREQVRVLFLNDK 158 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++L+A + + GT++ T V+PRE++ RAL NA +VL HNHPSG+ TPS D ++T ++ Sbjct: 159 HELLADDVMGQGTVDHTPVYPREIVARALQLNATMLVLVHNHPSGDPTPSADDVVMTTQI 218 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A +++I V DH+IV G ++ S E G L Sbjct: 219 CGAAKIMNIHVWDHIIVAGEKLLSMREAGFL 249 >UniRef50_B3JIE2 Putative uncharacterized protein n=10 Tax=Bacteroidales RepID=B3JIE2_9BACE Length = 220 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 2/150 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHE--PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 +TP + + A++ R A S+ + + + + EE VL LN+ + Sbjct: 68 LTPSRKKVAYAAIELYKRLKEGQVESPALLSSNNVYKMMHPVLCDIATEEMWVLLLNSSS 127 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 +LI + G IN V R ++K+ALY+NA + ++ HNHPSG PS AD +TE + Sbjct: 128 KLIRKVRISCGGINTAPVDIRVIMKQALYYNAVSFIMVHNHPSGARKPSSADDRLTEAVK 187 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A +DIR+ DH+IV GN +S+A+ G L Sbjct: 188 KAAETLDIRLVDHVIVAGNNYYSYADEGRL 217 >UniRef50_Q4QPE3 Putative DNA repair radC-like protein n=5 Tax=Haemophilus influenzae RepID=Q4QPE3_HAEI8 Length = 156 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 54/153 (35%), Positives = 93/153 (60%), Gaps = 5/153 (3%) Query: 1 MTPGERSLIQRALKTLDRHLHEP-----GVAFTSTRAAREWLILNMAGLEREEFRVLYLN 55 + +++++++A L + + E FT A+ + + ERE F VL+L+ Sbjct: 4 LNEQQQAILEQAQVILTKVMEEKPFYQGAQEFTEPSIAKLYFQTIIGNEERENFVVLFLD 63 Query: 56 NQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITE 115 ++LI E +F G+++ T V RE+I++AL NA+A+++ HNHP+G V PS AD+ IT+ Sbjct: 64 RIHRLIKSEVMFQGSVSETSVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADKYITK 123 Query: 116 RLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 RL +A L+DI++ DH IV G+ F F ++ L+ Sbjct: 124 RLKEACELMDIKLLDHFIVSGSASFCFTDNHLI 156 >UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria RepID=Y1707_THEEB Length = 250 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 3/147 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHE---PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + + I A++ R S A L ++ E F VL L+ + Sbjct: 89 VGPAKATTILAAVELGKRVFQSRPGEQTIIDSPALAAAVLAADLMWQATERFAVLLLDVR 148 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++L+ + GT T HPRE+ + A+ NA+ +++AHNHPSG ++PS+AD +T+++ Sbjct: 149 HRLLGSHVITVGTATETLAHPREIFREAVRRNASRLIIAHNHPSGNLSPSQADLDLTKQI 208 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAE 144 +QA L++I V DHLI+G S E Sbjct: 209 LQAGQLMEIPVLDHLILGNGDYQSLRE 235 >UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales RepID=Y894_PORGI Length = 227 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 53/152 (34%), Positives = 84/152 (55%), Gaps = 4/152 (2%) Query: 1 MTPGERSLIQRALKTLDR---HLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 M P + + A++ R + T +R A + + L +EE VL LN Sbjct: 76 MGPAKAVTVMAAMELSRRIPSQEMPRRESITDSRMAYRTISPFLTDLPQEEMWVLLLNQS 135 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++I+ E L G ++ T R ++ +A+ H A+A++LAHNHPSG V PS+ D +T+R+ Sbjct: 136 GKIISMENLSRGGVSETSADVRLIMHKAVSHLASAIILAHNHPSGTVRPSEQDIQLTQRV 195 Query: 118 VQALGLVDIRVPDHLIVGGNQ-VFSFAEHGLL 148 +A L+ R+ DHLI+G + FSFA+ GLL Sbjct: 196 QKAATLLGFRLNDHLIIGDDGAYFSFADEGLL 227 >UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5B1_9CHLA Length = 238 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 3/150 (2%) Query: 1 MTPGERSLIQRAL---KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + ++ AL K L R + A + ++ +E F + + + Sbjct: 81 LGTAKAIQLKAALNLGKRLSRTQVSAKFQIRTPLHAYHLVKDDLEKAMQEHFLTILQDVK 140 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 +I T+ GT+ T VHPREV A+ H AA+++L HNHPSG+ TPSK D +T+ L Sbjct: 141 GYVICSPTVALGTLTATVVHPREVFYPAIRHRAASLILVHNHPSGDPTPSKEDLDVTKTL 200 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGL 147 V LV I V DH+I+G ++ S E G Sbjct: 201 VAVGRLVGICVNDHIIIGRDRYVSLREEGF 230 >UniRef50_C8PDJ9 DNA repair protein RadC n=1 Tax=Lactobacillus iners DSM 13335 RepID=C8PDJ9_9LACO Length = 205 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 45/139 (32%), Positives = 77/139 (55%) Query: 10 QRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTG 69 + L + E +F S+ +L ++G +E +Y++ +N++IA + +F G Sbjct: 67 ELLLNRVKAIKREKMESFCSSSQIGYYLSNVLSGCYQEHLMAVYVDVKNKIIAEKVIFKG 126 Query: 70 TINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVP 129 T+N+ +HPR++ + A+ +NAA LAHNHPS ++TPS+ D +T+++ + IR Sbjct: 127 TLNQAIIHPRDIFRWAIIYNAAGFFLAHNHPSEDLTPSEQDIQVTKKISSVSECMGIRFL 186 Query: 130 DHLIVGGNQVFSFAEHGLL 148 DH IV SF E LL Sbjct: 187 DHFIVNTGNYLSFKEMELL 205 >UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Escherichia RepID=Q8VR59_ECOLX Length = 260 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 100/103 (97%), Positives = 102/103 (99%) Query: 46 REEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT 105 R EFRVLYLNNQN+LIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT Sbjct: 158 RMEFRVLYLNNQNKLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT 217 Query: 106 PSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 PSKADRLITERLVQALGLVDIRVPDHLIVGG+QVFSFAEHGLL Sbjct: 218 PSKADRLITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 260 >UniRef50_A9I305 DNA repair protein radC homolog n=3 Tax=Proteobacteria RepID=A9I305_BORPD Length = 177 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 51/138 (36%), Positives = 78/138 (56%) Query: 9 IQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFT 68 + A + L + A + + ++G+ E VLYLN+Q ++I + Sbjct: 38 VLAAARVAAESLIGDRADMGNPNAVKHYFQAKLSGMGHEVAAVLYLNSQFKVIRYMEMSH 97 Query: 69 GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRV 128 GT+ + V+PRE++K AL +AAA++++HNHPSG PS+AD +T L AL LVD+R+ Sbjct: 98 GTLTQASVYPREIVKTALRLDAAAIIMSHNHPSGIPEPSEADLALTRHLKHALALVDVRL 157 Query: 129 PDHLIVGGNQVFSFAEHG 146 DH+IV G S AE G Sbjct: 158 VDHIIVTGQNTTSLAERG 175 >UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales RepID=Q2GL92_ANAPZ Length = 232 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVA---FTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 M +++ + L R + + ++L + + E F VLYLN + Sbjct: 82 MGDSSVAMLVCVREALIRVMRGNITSCVMLDKWPKLIDYLKVKIGNSTIENFLVLYLNKR 141 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 LIA E TGT++ T ++ REVI++AL A +V++HNHPSG+ PSKAD +T +L Sbjct: 142 YSLIADEVQSTGTVDETPLYIREVIRKALLCGAVYIVISHNHPSGDPKPSKADINVTNKL 201 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A +DI + DH+IV + +SF HGLL Sbjct: 202 RIACNSMDIELVDHVIVTSKRHYSFKTHGLL 232 >UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EK65_PEDAC Length = 225 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 3/149 (2%) Query: 3 PGERSLIQRALKTLDRHLHEPGV---AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQ 59 P E ++ A++ R +P + ++ +E +L L+ +NQ Sbjct: 74 PAESLALEAAIELGRRVQRQPIHLLGKVLGSAQIGNLMVARFQKNPQEHLVLLCLDTKNQ 133 Query: 60 LIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQ 119 + +F G +N EVHPRE++ L +++ +L HNHPSG V PS D T+++ + Sbjct: 134 IKQERVIFKGGLNSAEVHPREIMAEVLRYSSNGFILVHNHPSGNVEPSMNDVAFTKKMKK 193 Query: 120 ALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L+ IR+ DHLIVG +S AE+ +L Sbjct: 194 IGDLMGIRLIDHLIVGDQTYWSAAENRVL 222 >UniRef50_C7PSZ0 DNA repair protein RadC n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PSZ0_CHIPD Length = 237 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHE---PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + + I ++ R R A + + E F VLYLN+ Sbjct: 86 IGTAKATKIIAVMELARRRQAGCMLQKKTIRQGRDAALYFKPLLGDAALESFHVLYLNHA 145 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++++ + G I T V P+ + + AL A V+L HNHPSG + PS AD ITE+L Sbjct: 146 SRVLQHRCISIGGITGTIVDPKVIFREALELGATQVILCHNHPSGNLRPSTADIQITEKL 205 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A L+DI V DH+IV S E G + Sbjct: 206 KAAGRLLDISVLDHIIVSEAGYCSMVEEGFI 236 >UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus RepID=C2BCF6_9FIRM Length = 226 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 51/142 (35%), Positives = 85/142 (59%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 + +Q + ++ L++ S A E++ ++ +RE F + LNN+N++I+ E + Sbjct: 85 ASLQFGKRIKEKILNKKKYQINSNEEAYEFIKDTISLKDREYFYTILLNNKNEVISKELI 144 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 G ++ + V+PREV K A+ +A +++LAHNHPSG +PSKAD LIT RL+ A ++DI Sbjct: 145 SIGDLSSSIVNPREVFKPAIKKSAKSMILAHNHPSGNPSPSKADLLITHRLIDAGEILDI 204 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 V DHLI+G S + + Sbjct: 205 TVLDHLIIGHGTYVSLKKDNYI 226 >UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AWS8_STRM9 Length = 211 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 46/126 (36%), Positives = 78/126 (61%) Query: 23 PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVI 82 + ++L +ERE F+VLY N +N LI E +F GTI+++ V+ RE++ Sbjct: 86 EEKKISCFEDLVKYLKFQYVDMEREVFKVLYFNTKNVLIKDENIFYGTIDKSVVYVREIV 145 Query: 83 KRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSF 142 K L +NA ++++ HNHPSG + PS DR +T++++ L L+D+R+ DH+I+ +SF Sbjct: 146 KNILKYNAKSIIIVHNHPSGNLEPSNDDRCLTKKIIDVLKLIDVRLSDHIIISNKGYYSF 205 Query: 143 AEHGLL 148 E+G + Sbjct: 206 LENGQI 211 >UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34E02 Length = 243 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 43/139 (30%), Positives = 75/139 (53%) Query: 10 QRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTG 69 + + + + +F + + + +M +E+EE ++ N +N LI LF G Sbjct: 105 ELSRRIWKTLAQKEIKSFDGPESIAAFYMEDMRHMEQEELHLMMFNTKNMLIRESCLFRG 164 Query: 70 TINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVP 129 T+N + RE+ AL ++A + L HNHPSG+ +PS D +T ++ QA L+ + + Sbjct: 165 TVNASVASAREIFIEALRYHAVRLALVHNHPSGDPSPSGEDIRLTRQVAQAGELLGVTLL 224 Query: 130 DHLIVGGNQVFSFAEHGLL 148 DH+I+G N FSF E G++ Sbjct: 225 DHVIIGDNSYFSFKERGII 243 >UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DS55_9BACT Length = 235 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 49/157 (31%), Positives = 86/157 (54%), Gaps = 9/157 (5%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGV---AFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + + ++ + + E + +A +LI +AG +EEF +L L+ + Sbjct: 77 VGPAKATSLRAVFALARKLVAEEAMEQFTIHRPESAAPYLIQLLAGKSKEEFHILLLDTK 136 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N+L+ + G ++R+ VHPREV + AL + A ++LAHNHPSG+ +PS D T+ L Sbjct: 137 NRLMRSSQISIGLLDRSHVHPREVFREALRYGTAKIILAHNHPSGDPSPSPQDIECTKNL 196 Query: 118 VQALGLVDIRVPDHLIVGGN------QVFSFAEHGLL 148 ++A ++ ++V DHLI+G Q S + GL+ Sbjct: 197 IEAGEILGVKVVDHLIIGHKLPGDSRQFVSLRQLGLV 233 >UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21_RHOBA Length = 319 Score = 155 bits (393), Expect = 3e-37, Method: Composition-based stats. Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 10/154 (6%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGV------AFTSTRAAREWLILNMAGLE----REEFR 50 +T I ++ R TST A E+ A L +EEF Sbjct: 165 VTKASYCQIMAGIELGRRATEAARERPVPIVKITSTTEATEYCAQKFAYLAGDAVQEEFH 224 Query: 51 VLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKAD 110 ++ L+ +++ I + GT++ + VHPREV + A+ AAAV+L HNHPSG+ TPS+ D Sbjct: 225 IVTLDTKHKPIRTHRITVGTLDSSLVHPREVFRPAIRDAAAAVLLVHNHPSGDPTPSRED 284 Query: 111 RLITERLVQALGLVDIRVPDHLIVGGNQVFSFAE 144 +TERL +A L+ I V DH++V + S E Sbjct: 285 HAVTERLTEAGKLIGITVLDHIVVAKQRCLSLRE 318 >UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleidia extructa W1219 RepID=D2MNQ5_9FIRM Length = 223 Score = 155 bits (392), Expect = 5e-37, Method: Composition-based stats. Identities = 45/143 (31%), Positives = 78/143 (54%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 E I ++ +WL + +E+F V++L + ++++ + Sbjct: 80 ELLAIFEIVRRSSAAKLPTLPRVQHPSVLFDWLKQEIGTSLQEKFLVVFLASDQRVLSYK 139 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 LF GTIN + V PRE+ K AL N+ ++L HNHPSG ++PS+ D +T+R+ +A L+ Sbjct: 140 ILFVGTINASMVFPREIFKEALLLNSPNIILVHNHPSGNLSPSQEDISLTKRIKEAGQLM 199 Query: 125 DIRVPDHLIVGGNQVFSFAEHGL 147 ++V DH+IV + FSF + G+ Sbjct: 200 GVKVLDHIIVTQSDYFSFVQEGI 222 >UniRef50_Q6TFX1 ORF25 n=3 Tax=Enterobacteriaceae RepID=Q6TFX1_ERWAM Length = 149 Score = 154 bits (391), Expect = 6e-37, Method: Composition-based stats. Identities = 76/148 (51%), Positives = 99/148 (66%), Gaps = 1/148 (0%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 + E ++I++A + + T AAR L +A RE F +LN N + Sbjct: 3 FSAEELNIIRQADAIIAGKIT-TTDFITGADAARSLLRFRLAAEPRESFCAFFLNCHNGV 61 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 IA E LF GTI+ VHPR V++RAL+HNAAAVVLAHNHPS TPS+AD+LITERL Q Sbjct: 62 IAFEELFKGTISSVTVHPRIVLQRALHHNAAAVVLAHNHPSANTTPSQADKLITERLAQV 121 Query: 121 LGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 LG+VD++V DHLIVGG+ ++SFAEHGL+ Sbjct: 122 LGMVDVKVLDHLIVGGSDIYSFAEHGLI 149 >UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B4AA Length = 226 Score = 154 bits (391), Expect = 6e-37, Method: Composition-based stats. Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 2/147 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPG--VAFTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 + + I AL+ R + + L M+ L +E F ++ L+N N Sbjct: 73 INKAKAIGIMAALEFSKRINIHTNINEVYDNPTKVFYHLETKMSHLSQEHFLIMILDNHN 132 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 +LIA +TLF G++N + V RE+ + AL N +++ HNHPSG+ PS D +T++LV Sbjct: 133 RLIAEKTLFIGSVNMSIVSAREIFREALAFNGVSIICVHNHPSGDAHPSSEDISMTQKLV 192 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEH 145 ++++ + DH+I+G NQ +SF Sbjct: 193 DLGKMMNVDIVDHIIIGRNQYYSFKAE 219 >UniRef50_Q3A6E7 DNA repair protein, RadC-like n=3 Tax=Desulfuromonadales RepID=Q3A6E7_PELCD Length = 166 Score = 154 bits (391), Expect = 7e-37, Method: Composition-based stats. Identities = 61/149 (40%), Positives = 86/149 (57%), Gaps = 5/149 (3%) Query: 3 PGERSLIQRALKTLDRHLHEPG---VAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQ 59 P +I+ +TL G AFTS R E L + +E F L+L+N+N+ Sbjct: 20 PLRLKVIRPVFETLKVKELPAGYLDEAFTSPRKVAEML-AFLKAESKEYFMALHLDNKNR 78 Query: 60 LIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQ 119 L+ + + G+++ + VHPREV K AL +AA +VL HNHPSG+ PS D +T RLV+ Sbjct: 79 LLCLDRVSVGSLSASIVHPREVFKSALLSSAAGLVLVHNHPSGQTEPSHEDEEVTTRLVK 138 Query: 120 ALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A ++ I V DH+I+G FSFAE GLL Sbjct: 139 AGEMLGIHVLDHIILGDG-FFSFAEQGLL 166 >UniRef50_O67541 UPF0758 protein aq_1610 n=2 Tax=Aquificaceae RepID=Y1610_AQUAE Length = 231 Score = 154 bits (391), Expect = 7e-37, Method: Composition-based stats. Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 2/149 (1%) Query: 1 MTPGERSLIQRALKTLDR-HLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQ 59 + + ++ ++ R + ++ + + A E+L RE LYL+ N+ Sbjct: 84 LGLVKALQVKALVELSKRFKGGKSRISIRNPQEAFEFLKDKF-DERRESLIALYLDLSNR 142 Query: 60 LIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQ 119 L+ E + G +N P++++ +A+ +A +++AHNHP GE +PS D TERL + Sbjct: 143 LLDWEVVAIGNVNTVFSKPKDILFKAVKLSANGIIIAHNHPQGEPSPSNEDLNFTERLKK 202 Query: 120 ALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A L+ + DHLI+ + FSF E G+L Sbjct: 203 ACELLGFELLDHLILSEGRYFSFREEGVL 231 >UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Y1765_PARUW Length = 231 Score = 154 bits (390), Expect = 7e-37, Method: Composition-based stats. Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRAL---KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + ++ AL R + + A + + + RE F ++ + + Sbjct: 79 IGFAKAIQLKAALNLGFRATRQQIKSRYLIEHSSHAYQLVKDELENENREIFMAIFQDTK 138 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 LI E + G++++T VHPREV A+ H AA++++ HNHPSG+ PS D +T+ L Sbjct: 139 GYLITYEVISIGSLSQTLVHPREVFYSAIRHKAASLIVVHNHPSGDPMPSNQDLKLTQIL 198 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++ L+ I + DHLI+G N SF + LL Sbjct: 199 LEGSRLLGIPLRDHLIIGKNSYVSFKDQNLL 229 >UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHA4_DESAA Length = 265 Score = 154 bits (390), Expect = 8e-37, Method: Composition-based stats. Identities = 54/155 (34%), Positives = 81/155 (52%), Gaps = 7/155 (4%) Query: 1 MTPGERSLIQRALKTLDRHLHEPG------VAFTSTRAAREWLILNMAGLEREEFRVLYL 54 + P I +HL A +S+ L + E F ++YL Sbjct: 96 LGPANILGILLMRAVAKKHLESEAVLASLQEAVSSSEELYNLLNFQFENKKNECFFIVYL 155 Query: 55 NNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLIT 114 + QN+++ ET F G++N + V+ RE+I +AL A+AV+LAHNHPSG PSK D +T Sbjct: 156 DVQNRILNMETPFEGSLNASHVYTRELIDKALKTGASAVLLAHNHPSGNTKPSKNDIQLT 215 Query: 115 ERLVQALGLVDIRVPDHLIVGG-NQVFSFAEHGLL 148 L A V+I + +HLI+G + +SFA+HG L Sbjct: 216 YTLFTAFRSVEIHLLEHLIIGKQGEYYSFADHGYL 250 >UniRef50_Q2FT43 UPF0758 protein Mhun_2739 n=5 Tax=Archaea RepID=Y2739_METHJ Length = 225 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 4/152 (2%) Query: 1 MTPGERSLIQRALKTLDRH---LHEPGVAFTSTRAAREWL-ILNMAGLEREEFRVLYLNN 56 + P + +++ + +R+ + + T + + +++G +E F V LN Sbjct: 74 IGPTKAAVLMACFELANRYGTPAEKERIRITEPDHILKISEVTDLSGKSQEHFLVTTLNG 133 Query: 57 QNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITER 116 +++I T+ G +N + VHPREV A+ AAA++ HNHPSG PS D +T + Sbjct: 134 ASEVICTRTITMGLLNHSLVHPREVFADAITDRAAAIICIHNHPSGNPEPSSEDITVTRQ 193 Query: 117 LVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L +A ++ I + DHLI +V S G L Sbjct: 194 LSEAGKILGISLLDHLIYTKGKVTSLRSLGYL 225 >UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepID=Q1RK76_RICBR Length = 249 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 54/142 (38%), Positives = 85/142 (59%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 ++++ + + S + ++L +NM + E+FRVL+LN +N LIA E L Sbjct: 108 AIVRELINRALKQKIINKNIIASWGSLIDYLKVNMGNMRLEQFRVLFLNKKNILIADEVL 167 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 GTI++ V+PRE+IKRAL++ A+ ++L HNHPSG PSKA +T +V ++I Sbjct: 168 SQGTIDQAAVYPREIIKRALFNEASNIILVHNHPSGSPDPSKAGIDMTNIIVDMCKTINI 227 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 V DH+I+ N+ FSF + LL Sbjct: 228 IVHDHVIISNNKYFSFKSNMLL 249 >UniRef50_A7V531 Putative uncharacterized protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V531_BACUN Length = 196 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 2/150 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHE--PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 +TPG R + A++ R L + ++ E + + L EEF V+ +N Sbjct: 47 LTPGRRRVAVAAVEMYKRQLSQQVERRQIRMSKDVYELMEPLIGDLPNEEFWVVSINQAG 106 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 ++I + G I++T R +++ + A HNHPSG PS D+ +TE+L Sbjct: 107 RIIKKVRISVGGIDQTSADIRLIMRVLIDTGAVQFAAVHNHPSGNSRPSNEDKRLTEQLK 166 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A GL +IR+ DH+I+ +SF + GL+ Sbjct: 167 KAAGLFNIRMIDHVIITNGGYYSFGDEGLI 196 >UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin514 RepID=B9XSW5_9BACT Length = 244 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 9/157 (5%) Query: 1 MTPGERSLIQRAL---KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + ++ A + + L G + A + L E E F+V+ LN + Sbjct: 87 IGRDKAIALKSAFTLARRMAAELKPEGTVLDNPEAIADLLREENRSYEVENFQVVLLNTR 146 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 +LI E + GT++ +HPREV K A+ NA+A+VLAHNHPSG+ TPS+AD +T L Sbjct: 147 RKLIRVENITQGTLDTLLIHPREVFKSAISANASAIVLAHNHPSGDPTPSEADIKVTRDL 206 Query: 118 VQALGLVDIRVPDHLIVGG------NQVFSFAEHGLL 148 ++A L+ I + DH+I+G S E G Sbjct: 207 IRAGQLLKIEILDHIILGRRTNERPKDYASLRELGYF 243 >UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QT39_9RHOB Length = 228 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 49/141 (34%), Positives = 77/141 (54%) Query: 8 LIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLF 67 I++ + R +++ M LE E+FR L+LN ++ +IA E + Sbjct: 88 AIRQCIVRSARAEITERRVLDCWSEVIDYIQATMGYLEIEQFRCLFLNKKHGVIADEVMQ 147 Query: 68 TGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIR 127 GT++ T V+PRE+++RAL A+A++L HNHPSG+ TPS+ D +T +LV + I Sbjct: 148 EGTVDHTPVYPRELMRRALILQASALILVHNHPSGDPTPSRPDIEMTAQLVDIAKPLGIE 207 Query: 128 VPDHLIVGGNQVFSFAEHGLL 148 + DH+IV SF LL Sbjct: 208 INDHIIVARGLAVSFKGMNLL 228 >UniRef50_Q9LAI3 RadC (Fragment) n=2 Tax=Firmicutes RepID=Q9LAI3_BACSQ Length = 119 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 45/119 (37%), Positives = 74/119 (62%) Query: 30 TRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHN 89 A + + ++R+ F V+ L+ +NQ A G++N + VHPREV+K A+ N Sbjct: 1 PEDAYNLVKCFLVDVDRDYFLVICLDTKNQPTAINICHVGSLNASLVHPREVMKPAILSN 60 Query: 90 AAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A+V++AHNHPS + TPSK D +T+RL++A ++ I + DH++VGGN+ S E + Sbjct: 61 SASVIVAHNHPSLDPTPSKEDINVTKRLIEAGRIMGIDILDHIVVGGNKYVSLKEKRYI 119 >UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium RepID=C3WLA1_9FUSO Length = 242 Score = 152 bits (386), Expect = 2e-36, Method: Composition-based stats. Identities = 48/154 (31%), Positives = 82/154 (53%), Gaps = 6/154 (3%) Query: 1 MTPGERSLIQRALKTLDR------HLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYL 54 + P LI+ + L + T A ++L + + E+F V+YL Sbjct: 89 IGPISAILIKFVGELLTELYGENLKIETKADKITDKEALLKFLRNKIGYEDVEKFYVIYL 148 Query: 55 NNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLIT 114 ++ N++IA E +GT++R+ ++PRE+ KR + NA ++++AHNHPSG PSK D IT Sbjct: 149 SSSNEVIAFEESSSGTLDRSSIYPREIYKRVIMENAKSIIIAHNHPSGNTCPSKCDIDIT 208 Query: 115 ERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + + L + +H+I+ + FSF E GL+ Sbjct: 209 NEIAKGLKNFGALLLEHIIITRDSYFSFLEEGLI 242 >UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacterium RepID=UPI0001BC61BD Length = 227 Score = 152 bits (386), Expect = 2e-36, Method: Composition-based stats. Identities = 48/129 (37%), Positives = 76/129 (58%) Query: 20 LHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPR 79 E + ++ + RE+F VL+LN NQL+ E LF G+I+R+ V+PR Sbjct: 99 QEEKNIHIQRKEDLISYVRAQIGFENREKFFVLFLNTANQLLCSEELFQGSIDRSAVYPR 158 Query: 80 EVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQV 139 E++++ L + A +V+ AHNHPSG PS+ D +T+ + AL + D+ + +H+IV + Sbjct: 159 EILEKVLKYKAKSVIFAHNHPSGNTQPSRQDIALTKEMKDALRMFDVLLIEHIIVSKHSY 218 Query: 140 FSFAEHGLL 148 FSF E GLL Sbjct: 219 FSFLEEGLL 227 >UniRef50_Q4EGF4 DNA repair protein RadC n=7 Tax=Bacilli RepID=Q4EGF4_LISMO Length = 147 Score = 152 bits (386), Expect = 2e-36, Method: Composition-based stats. Identities = 50/141 (35%), Positives = 74/141 (52%), Gaps = 1/141 (0%) Query: 9 IQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFT 68 + R + + S + + +RE F V+ LN +N ++A Sbjct: 7 VVRIEQIIREAEEGVDYIIRSPEDGAKIASRFIGRDDREVFFVMCLNTKNNVVAVHRCHV 66 Query: 69 GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRV 128 G++N + VHPREV K A+ +N A+V+LAH HPSG++ PS D +T+RLV+A L+ I V Sbjct: 67 GSLNSSIVHPREVFKSAILNNVASVILAHQHPSGDIKPSMEDINVTKRLVEAGKLLGIEV 126 Query: 129 PDHLIV-GGNQVFSFAEHGLL 148 DHLIV N S E G + Sbjct: 127 LDHLIVNSDNSFTSLKERGYI 147 >UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID=B9MPC4_ANATD Length = 232 Score = 152 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLH---EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + LI + R+L + AA E++ G + E F V+ L+ Q Sbjct: 77 VGENSAILISLISQISRRYLADKNRKTFQLRNVEAAAEYIKSLFVGRKNEVFYVICLDTQ 136 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 +I LF GT+ V+PR+V++ + +NA++V+LAHNHP G V PS D T+++ Sbjct: 137 LNVIYSVPLFEGTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSVRPSMDDIKTTQKI 196 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 V AL + + V DH IV ++ +SFA++G+L Sbjct: 197 VNALSTIGVAVNDHFIVAKDEYYSFAQNGML 227 >UniRef50_C6VI64 DNA repair protein n=3 Tax=Lactobacillus plantarum RepID=C6VI64_LACPJ Length = 211 Score = 152 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 53/119 (44%), Positives = 74/119 (62%) Query: 30 TRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHN 89 + L + A LE+E+ ++L L+ +NQ+I + +F GT+N PRE+IK AL Sbjct: 87 SEQLGAVLARDFANLEQEQLQLLCLDTKNQVIKRQVVFQGTLNSCPAQPREIIKVALTTP 146 Query: 90 AAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A VV+AHNHPSG+VTPSK D T+RL A L+ + + D I+G N FSFAE G+L Sbjct: 147 TARVVIAHNHPSGDVTPSKKDVEFTKRLQLACELMGLPLLDSFIIGVNDYFSFAEQGVL 205 >UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9M0_9BACT Length = 227 Score = 152 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 4/151 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHEPG---VAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + +L+ + ++L + +T +L + + G ++E F VL+LN Q Sbjct: 78 LGEAAVTLLALHKQLCTKYLEQKARDVDVLDNTTKIVNFLRMKLGGGKKETFMVLFLNAQ 137 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N L+ + + GT++R V+ REV+++A+ A AV+LAHNHP+G PS AD +T + Sbjct: 138 NHLLCFDVIP-GTVDRATVYAREVLEKAINTKATAVILAHNHPTGICEPSPADIKLTNTI 196 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 Q L V I + DH+IV + FSFA +L Sbjct: 197 RQVLQPVGILLHDHIIVAPSCYFSFASRRML 227 >UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae RepID=C7NDB9_LEPBD Length = 240 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 86/133 (64%) Query: 16 LDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTE 75 L + +H ++ TS +L ++ + E F+VL+LN QN+L+ E LF GTI+R+ Sbjct: 108 LYKKIHNKKISITSNIKLLNYLKCSLLKRDIEVFKVLFLNTQNELMKEEELFYGTIDRST 167 Query: 76 VHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVG 135 ++ RE+IK+ L +NA +V+L HNHP+G + PS +D L+T+++ + ++IR+ DHLI+ Sbjct: 168 IYIRELIKKILEYNAKSVILVHNHPAGSLKPSDSDILLTKKVKEVFESMEIRLLDHLIIS 227 Query: 136 GNQVFSFAEHGLL 148 FSF E G+L Sbjct: 228 EQGYFSFLEGGIL 240 >UniRef50_Q0FHF8 DNA repair protein RadC n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FHF8_9RHOB Length = 168 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 54/151 (35%), Positives = 81/151 (53%), Gaps = 4/151 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 + E I A L RH S ++L LN E FRVL L+ +N+L Sbjct: 17 FSEAEIETIDAARDILRRHARATA-VLQSWTMLTDYLALNAVRERVEVFRVLLLDRKNKL 75 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 I + + G+I+ V+ EV++ AL +A+A++L HNHPSG+ PS+AD +T ++V A Sbjct: 76 IRDKIMSRGSIDHVPVYVSEVMRSALVLDASALILCHNHPSGDPQPSQADIDMTRKIVDA 135 Query: 121 LGLVDIRVPDHLIVGGNQ---VFSFAEHGLL 148 ++DI + DHLIVG + FS G+L Sbjct: 136 CRVMDITLHDHLIVGFGREQAAFSMRAAGML 166 >UniRef50_B5CP31 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B5CP31_9FIRM Length = 168 Score = 152 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 2/138 (1%) Query: 13 LKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTIN 72 ++ + S +A E + ++ +RE F +L + N Q+I + GTIN Sbjct: 20 IRLVREPSLYSEQILDSPQAVVELMAKELSQYDREVFCILNMKNNGQVINMNLVSVGTIN 79 Query: 73 RTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHL 132 + V PREV K ++ NA+A++ HNHPSG V PSK D ++T +L + L+ I + DH+ Sbjct: 80 ASLVIPREVFKSSILANASAIIGLHNHPSGNVKPSKEDMIVTRKLQKCGQLLGIELLDHI 139 Query: 133 IVGG--NQVFSFAEHGLL 148 IVGG ++ SF E +L Sbjct: 140 IVGGTNGKMLSFREEKML 157 >UniRef50_B0MF12 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MF12_9FIRM Length = 282 Score = 152 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 48/136 (35%), Positives = 72/136 (52%) Query: 13 LKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTIN 72 ++ +D + A + L+ ++RE F VL L Q+I GT+N Sbjct: 4 IRLVDDPPIYSEDKIQNPNDAVQLLLKEFDSVDRELFFVLNLKTNGQVINVNIASMGTLN 63 Query: 73 RTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHL 132 + PRE+ K ++ NAA+V+L HNHPSG+ TPSK D L+T+RLV L+ I V DH+ Sbjct: 64 SCILSPREIFKASILSNAASVILMHNHPSGDCTPSKQDVLMTKRLVACGELIGITVLDHV 123 Query: 133 IVGGNQVFSFAEHGLL 148 I+G S E ++ Sbjct: 124 ILGKETYLSMKEANMM 139 >UniRef50_Q03EP2 DNA repair protein n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03EP2_PEDPA Length = 219 Score = 152 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 3/149 (2%) Query: 3 PGERSLIQRALKTLDRHLHEPGV---AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQ 59 P ++ ++ R +P + + ++ +E VL L+ +NQ Sbjct: 71 PDATVALEAGIELGRRIQKQPIHLLGKVLGSAQLGQMMVSRFQKEPQEHLLVLCLDTKNQ 130 Query: 60 LIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQ 119 + +F G +N EVHPRE++ L +A + VL HNHPSG + PS D T+++ + Sbjct: 131 IKREIVVFKGGLNSAEVHPREIMVEVLRVSANSFVLIHNHPSGNIEPSTNDLAFTKKMKK 190 Query: 120 ALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L+ IR+ DHLIVG +S AE + Sbjct: 191 VGDLMGIRLIDHLIVGDQSYWSAAEKRFI 219 >UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUL4_9BACT Length = 214 Score = 152 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPG---VAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + IQ A++ R L S+ + ++ EE LYLN Sbjct: 63 IGLKRAARIQAAVELGRRVLAARELGPDPIGSSNDVVRIFRPLLTEMKHEECWCLYLNTG 122 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N+++ + + G + T V R VIKRAL A ++L HNHPSG PS+ D+++T+++ Sbjct: 123 NRIVERQRVSQGGVQATVVDHRLVIKRALELLATQIILVHNHPSGAALPSEQDKILTKKI 182 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A L DIR+ DHLI+ +SF + GLL Sbjct: 183 AEAAALFDIRLLDHLIIARGGEYSFRQSGLL 213 >UniRef50_UPI00016C0069 DNA repair protein RadC n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0069 Length = 225 Score = 152 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAF---TSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + + ++ R + + + +E F LYL+++ Sbjct: 68 IGKMKAIQLVAIVEIAKRLHVPKPMQLIDLKNPEDVAGLFVEEFENKFQEMFYALYLDSK 127 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 LI + GT+N T VH R+V + A+ A ++++ HNHPSG+ PSK D IT L Sbjct: 128 LGLIKKHCISIGTLNMTIVHARDVFRPAIEVCANSLIVVHNHPSGDPEPSKQDITITRDL 187 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++ I + DH+IVG S + G+L Sbjct: 188 QFVGEVIKIPLLDHVIVGDGDFRSLRQMGIL 218 >UniRef50_Q4V1K6 Possible DNA repair protein n=7 Tax=Bacillus cereus group RepID=Q4V1K6_BACCZ Length = 151 Score = 152 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 2/150 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMA--GLEREEFRVLYLNNQN 58 M + +K ++ T + + E F V LN +N Sbjct: 1 MGKRIMVQSVKLVKESNKIYDVERKRITCPDDINILARAVLCIDEMPHEVFGVFNLNTKN 60 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 ++I + G+IN + VHPRE + A+ +NAA++V HNHPSG S DR +T+RL Sbjct: 61 EIIGCSIVSQGSINSSVVHPRETFRTAILNNAASIVCFHNHPSGNPDASPEDREVTKRLA 120 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 + ++ I + DH+I+G ++ S E G + Sbjct: 121 ECGKILGIELLDHVIIGEHRFVSLREKGCI 150 >UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5YDI9_DICT6 Length = 228 Score = 151 bits (383), Expect = 6e-36, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 4/152 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHEP----GVAFTSTRAAREWLILNMAGLEREEFRVLYLNN 56 + + I+ +++ R E G + ++ A +M L+ E +Y++ Sbjct: 77 IGVTKAIQIKASIELGRRIFSEKKSYFGESISNPYDAFLIFKEDMFDLKEEHLFCIYMDI 136 Query: 57 QNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITER 116 +N+ ++ + G +N PR++ K AL N+A ++LAHNHPSG++TPS+ D + T+R Sbjct: 137 KNKCLSKRLIAKGDLNIVYASPRDIFKYALQENSAKIILAHNHPSGDLTPSEDDVIFTKR 196 Query: 117 LVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L++A ++ I V DHLI+ S E + Sbjct: 197 LIEAGKILGIEVLDHLIIHNEDYLSLKEKNFI 228 >UniRef50_Q73P26 DNA repair protein RadC n=2 Tax=Treponema RepID=Q73P26_TREDE Length = 225 Score = 151 bits (382), Expect = 6e-36, Method: Composition-based stats. Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 2/147 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQL 60 M + S + A++ R+ + L + A +RE F + LN N++ Sbjct: 75 MGDSKISTVLAAMELGRRYYDNKNRTISHPTDVVPLLQ-HYADRDREHFICVSLNGANEI 133 Query: 61 IAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQA 120 IA + GTINRT VHPREV L AAA++ AHNHPSG + PS D +T+R+ +A Sbjct: 134 IATRVVSVGTINRTIVHPREVYSDPLKDRAAAIIAAHNHPSGNLEPSSEDMELTKRIYEA 193 Query: 121 LGLVDIRVPDHLI-VGGNQVFSFAEHG 146 ++ I++ DH+I V FSF + G Sbjct: 194 GKILGIKLLDHIILVPNGNFFSFVQSG 220 >UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Deltaproteobacteria RepID=Q6AQC9_DESPS Length = 249 Score = 151 bits (382), Expect = 7e-36, Method: Composition-based stats. Identities = 48/140 (34%), Positives = 79/140 (56%), Gaps = 1/140 (0%) Query: 9 IQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFT 68 I + E S+ E+L M GL++E F V++L++ + +I E + Sbjct: 94 IHAVAARYLQLRLEGKSYLHSSTEVVEYLSYRMRGLKKEVFCVVFLDSSHGIICSEIIAE 153 Query: 69 GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRV 128 G++ VHPRE++ +AL H+AAA++++HNHPSG + PS D +T L + I++ Sbjct: 154 GSLTVNTVHPRELLVKALEHHAAALIISHNHPSGALLPSPQDIQLTRLLYFLCSSMQIQL 213 Query: 129 PDHLIVGGNQVFSFAEHGLL 148 DH+I+G SFA+HGL+ Sbjct: 214 LDHIIIGDGAY-SFADHGLM 232 >UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BG63_9BACT Length = 232 Score = 151 bits (382), Expect = 7e-36, Method: Composition-based stats. Identities = 53/151 (35%), Positives = 78/151 (51%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVA---FTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + ++ ++ R + S++ E + +++ L EEF +LYLN Sbjct: 82 IGEVKAIKLKAVVELSKRFQKQQPDKTTVLNSSKIVYESIYMDLDTLPHEEFWILYLNQS 141 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N+L+ L G I +T V R KRA A ++LAHNHPSG +TPS +D IT + Sbjct: 142 NRLLEKYRLSKGGITQTTVDLRLAFKRAFEVGATGLILAHNHPSGGLTPSSSDEQITRKF 201 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A VD+R+ DHLIV FSFA+ GLL Sbjct: 202 KLAAASVDLRILDHLIVSKKGYFSFADEGLL 232 >UniRef50_A5VEU8 DNA repair protein RadC n=4 Tax=Sphingomonadales RepID=A5VEU8_SPHWW Length = 230 Score = 151 bits (382), Expect = 7e-36, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 79/145 (54%) Query: 4 GERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAG 63 + + + L R + + +A ++L +MA E RVL+LN++N L+ Sbjct: 86 AALKIAEASALRLLRSKVQDRPILSDWQALADYLRADMAHRAVERVRVLHLNSKNVLVRD 145 Query: 64 ETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGL 123 E + G++++ V+ RE+I+RAL +AA+++ HNHPSG+ PS+ D +T L+ A Sbjct: 146 ELVSEGSVDQAAVYVREIIRRALELGSAALIIVHNHPSGDPQPSRQDVELTRELIAAAKP 205 Query: 124 VDIRVPDHLIVGGNQVFSFAEHGLL 148 + I + DH++VG S GL+ Sbjct: 206 LGIAIHDHVVVGTRGQASLRALGLI 230 >UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYP9_ABIDE Length = 240 Score = 151 bits (382), Expect = 7e-36, Method: Composition-based stats. Identities = 49/150 (32%), Positives = 79/150 (52%), Gaps = 3/150 (2%) Query: 1 MTPGERSLIQ---RALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + I + + R H + + + M + E +L L+ + Sbjct: 78 VGPVKAVEIICICELARRIARTRHSYDEPLDTAAKISKRYMEEMRHFKEEHVVLLLLDIK 137 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 +LI T+ GTIN++ + PREV +AL + A +VL HNHPSG+ TPSKAD ++T+++ Sbjct: 138 CRLIKELTISIGTINQSFLRPREVFIQALKYEAVNLVLIHNHPSGDPTPSKADIIVTDKI 197 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGL 147 ++ LV I + DH+I+G SF E GL Sbjct: 198 LEVSELVGIPLVDHIIIGDCCYVSFREKGL 227 >UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteobacteria RepID=Y1139_BURP1 Length = 278 Score = 151 bits (382), Expect = 8e-36, Method: Composition-based stats. Identities = 58/151 (38%), Positives = 89/151 (58%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P +++ ++ R L E S A ++L L + RE F L+L+ + Sbjct: 128 IGPARTAILVAVVELARRALAEKARERPLVDSPGAVDDYLRLLIGTRPREVFVCLFLDAR 187 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++L+ E G++ R V+PRE+++RAL NAAA+++AHNHPSG V PS ADR +T L Sbjct: 188 HRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADRRLTRVL 247 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 AL LVDI++ DH +VG + FSFA+ G + Sbjct: 248 RDALALVDIKLIDHFVVGASDTFSFAQAGWI 278 >UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=C5TNC6_NEIFL Length = 224 Score = 151 bits (382), Expect = 8e-36, Method: Composition-based stats. Identities = 52/151 (34%), Positives = 77/151 (50%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHL---HEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 M + + R L + + ++ ++ ++L L++ + E L LN Q Sbjct: 74 MGLASYTQFAVVKEIGRRILGEDLQEQIILSNPKSVADYLRLHLGHEKIEVSVALLLNRQ 133 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 NQLIA L GT+ V+ RE++K AL A +++LAHNHP PS++D TERL Sbjct: 134 NQLIAVRELSRGTVAENTVYIREIVKLALDEYADSLILAHNHPGSSARPSESDVQFTERL 193 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 QAL LVDI + DH IV + S E G + Sbjct: 194 KQALSLVDITLLDHFIVTAKETCSLREQGYM 224 >UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium RepID=Y909_FUSNN Length = 232 Score = 151 bits (381), Expect = 8e-36, Method: Composition-based stats. Identities = 43/132 (32%), Positives = 78/132 (59%) Query: 17 DRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEV 76 + + + + ++ ++L + E E+F V+YL++ N++I E GT++R+ V Sbjct: 101 KKLIDKETLKISNKDILLKYLRNKIGYEEIEKFYVIYLSSSNEVIEFEENSVGTLDRSSV 160 Query: 77 HPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGG 136 +PRE+ K+ + NA +++LAHNHPS +TPSK+D +T + + L + +H+I+ Sbjct: 161 YPREIYKKVINLNAKSIILAHNHPSDNITPSKSDIELTNEIAKGLKNFGALLIEHIIITK 220 Query: 137 NQVFSFAEHGLL 148 N FSF E GL+ Sbjct: 221 NSYFSFLEEGLI 232 >UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae RepID=Y1834_PSYA2 Length = 227 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 53/150 (35%), Positives = 87/150 (58%), Gaps = 3/150 (2%) Query: 1 MTPGERSLIQRALKTLDRHL---HEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + P + + I +L+ R+L + G ++ ++++ ++ G RE F VL L+N Sbjct: 74 IGPAKYAQILASLEIGRRYLDSQLKTGQGLGRSQMVKDYISTHLRGEPREVFAVLCLDNA 133 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 LI E LFTG I+ V + V++ AL H + +++AHNHP + TPS AD L+T L Sbjct: 134 LNLINFEILFTGGISSCSVCIKHVLRHALSHATSQLIIAHNHPHTDATPSTADNLLTYEL 193 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGL 147 +A L+D+ + DH+IVG N+ S+AE+ L Sbjct: 194 KKACDLIDLSLIDHVIVGRNETLSYAENCL 223 >UniRef50_B2KEG6 DNA repair protein RadC n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KEG6_ELUMP Length = 228 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 41/142 (28%), Positives = 68/142 (47%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 +++ K + + + ++A + E F V+YL +N +I E L Sbjct: 87 KVVRGVYKKYAFSKLKKADIIRTPEDVANYCRASLAEHKDEVFEVIYLTVRNTVIGTEVL 146 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 G I+R + PR+V++ AL A +VL HNHPSG+ +PS D T+ + QA ++ I Sbjct: 147 SVGAIDRASISPRKVVEGALKAKAVGIVLVHNHPSGDPSPSMEDISFTKEVAQAARILGI 206 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 V DH+IV +S + Sbjct: 207 MVHDHIIVVRGGYYSMRAKSQI 228 >UniRef50_C3DWR5 DNA repair protein RadC n=1 Tax=Bacillus thuringiensis serovar sotto str. T04001 RepID=C3DWR5_BACTS Length = 154 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 49/137 (35%), Positives = 76/137 (55%), Gaps = 1/137 (0%) Query: 13 LKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTIN 72 ++ + + P T A E + +RE F V+ LN QN+++A G++N Sbjct: 17 IRQVREEVDIPRKKITGPDTAAEIATYFIGDDDREIFLVMCLNTQNEVVAVHRCHVGSLN 76 Query: 73 RTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHL 132 + VHPR+V K A+ +N+ ++V+AH HPSG V PS AD+ +++RL A L+ I V D L Sbjct: 77 SSVVHPRDVFKSAILNNSFSIVVAHQHPSGMVLPSDADKDVSKRLYDAGKLIGIEVLDSL 136 Query: 133 IVGG-NQVFSFAEHGLL 148 IV + +S E G L Sbjct: 137 IVNDAGRFYSLREKGYL 153 >UniRef50_C0R372 DNA repair protein RadC, putative n=11 Tax=Wolbachia RepID=C0R372_WOLWR Length = 218 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 49/150 (32%), Positives = 87/150 (58%), Gaps = 3/150 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHEP--GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 +T ++I +TL+R L E + E+L +++ ERE ++LYLN + Sbjct: 70 VTDSAVAMIMCVKETLERVLKEKLKSEPIMDLQGIVEYLNVSIGHSERECVKILYLNKRR 129 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 QLI E+ + G + + V+ +E+ ++AL NA +++++HNHP G + PS+ D+ +T+ L Sbjct: 130 QLIGEES-YIGEMEKAPVYIKEITRKALMKNATSIIMSHNHPGGSLEPSEEDQAVTKSLA 188 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 A V +++ DH+I+ FSF E+GLL Sbjct: 189 AACSTVSVKLFDHIIITSGGYFSFRENGLL 218 >UniRef50_C0QCU0 RadC2 n=2 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QCU0_DESAH Length = 187 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 47/130 (36%), Positives = 83/130 (63%), Gaps = 5/130 (3%) Query: 24 GVAFTSTRAAREWLILNMAGL---EREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPRE 80 + + + A++ + + +RE+F +L LN +N++I + TG+++ VHPRE Sbjct: 50 RESLSGPKQAQKIMKSLIEMQGQPDREQFCILMLNAKNKIIGLNIVSTGSLSSATVHPRE 109 Query: 81 VIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVG--GNQ 138 V+K A+ N++A++L HNHPSG +TPS D IT+R++QA ++ I V +HLI+ + Sbjct: 110 VLKPAILANSSAMILCHNHPSGTLTPSPEDIAITKRIIQASDIMGITVHEHLIINMDDDS 169 Query: 139 VFSFAEHGLL 148 +SF+E+GL+ Sbjct: 170 FYSFSENGLI 179 >UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJ65_9BACT Length = 221 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 44/136 (32%), Positives = 78/136 (57%) Query: 13 LKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTIN 72 + + V A ++L +A ++E F L+L+ +L+ E LF GT++ Sbjct: 86 ARLGYEDIDREAVIIDKPEKAAQFLKYKIAYDKKEHFVALFLDVNKKLLGFENLFKGTVD 145 Query: 73 RTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHL 132 R V+PRE+ +RA+ A V++AHNHPSG ++PS+ D +T++L++AL +DI + DH+ Sbjct: 146 RLAVYPREIAERAITSKATHVIVAHNHPSGNMSPSETDITLTDKLIKALAALDINLADHI 205 Query: 133 IVGGNQVFSFAEHGLL 148 I+ +SF ++ Sbjct: 206 IITTKGFYSFKREQVI 221 >UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUS2_DESOH Length = 253 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 49/142 (34%), Positives = 78/142 (54%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 L++ ++ +L + RE F ++++ +N++I ETL Sbjct: 87 RLVKAVADRCLEKELVGRPLLANSTDLLNYLNHTLRDRHRETFAAIFMDAKNRVIVVETL 146 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 G++ + V+PREV+ RAL H+AAA++ HNHPSGE PS+ D IT +LV A + I Sbjct: 147 SEGSLTESPVYPREVVARALAHHAAALICCHNHPSGEPEPSRQDIAITRKLVMACKTMGI 206 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 V +H+IVG FSFA++G + Sbjct: 207 TVHEHIIVGERGHFSFADNGYM 228 >UniRef50_C4ZA49 DNA repair protein RadC n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZA49_EUBR3 Length = 229 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 79/151 (52%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALK---TLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + ++ + + + + + + ++ + M L E Y + + Sbjct: 79 IGQIKAIQLKAIAELSLRIAKTKKVQSIRMNNPQTIADYYMEQMRHLTNEVVICAYFDVK 138 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++ + + + G+++ + V +I+ AL NA+ +VL HNHPSG+ TPS+ D +T+RL Sbjct: 139 SRFLGDKFISKGSLSSSVVDIGSIIRTALDKNASKLVLLHNHPSGDCTPSRNDIAVTDRL 198 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 ++ G+ I + DH+I+G N+ +SF E+ L+ Sbjct: 199 IEGSGIFSIELCDHIIIGDNEYYSFYENKLI 229 >UniRef50_B0G8S0 Putative uncharacterized protein n=5 Tax=Firmicutes RepID=B0G8S0_9FIRM Length = 860 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 1/138 (0%) Query: 10 QRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTG 69 Q A++ +++ + A + ++ ++RE F ++ L I + G Sbjct: 7 QVAIRMVEQPPLYSNEPMNNPDVAIRVMNEFLSQMDRELFCIVNLQADLTPINMNIVSVG 66 Query: 70 TINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVP 129 ++N ++PRE+ K A+ NA +++L HNHPSG +TPS +D T R+ + L+ I + Sbjct: 67 SLNEALINPREIFKSAILSNAHSMMLIHNHPSGNLTPSTSDIQTTARMQELGELMGISLV 126 Query: 130 DHLIVGGNQ-VFSFAEHG 146 DH+I G N +SF + G Sbjct: 127 DHIITGRNGNYYSFRDKG 144 >UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteria RepID=Y3126_ACIAD Length = 271 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 47/152 (30%), Positives = 83/152 (54%), Gaps = 4/152 (2%) Query: 1 MTPGERSLIQRALKTLDRHL----HEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNN 56 + + + + + R+L H+ + S+R ++L + G ++E F VL L++ Sbjct: 91 IGTTKYAHLMAVKELGRRYLNHYFHQDALNLNSSRLVLDYLRYELLGEKQEVFAVLCLDS 150 Query: 57 QNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITER 116 + + + + LF G++N + ++ AL +A +V+AHNHP G+ PS AD +T + Sbjct: 151 ELRKLNFKKLFYGSLNACNISINHTLRYALQQHACHIVIAHNHPFGKAEPSAADLDLTHQ 210 Query: 117 LVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 L QA LV+I++ DH I+ + FSFAE LL Sbjct: 211 LYQACQLVEIKLLDHFIIAKDGTFSFAERALL 242 >UniRef50_C2MB02 DNA repair protein RadC n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MB02_9PORP Length = 267 Score = 149 bits (376), Expect = 3e-35, Method: Composition-based stats. Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 14/162 (8%) Query: 1 MTPGERSLIQRALKTLDRHLH---EPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + I A++ R T + A L ++ L+ EE R LYL+ Sbjct: 103 LGDARACTILAAIELGRRLRDTPPPRRTPITCSLDAYRVLRRHLESLDHEELRCLYLDAS 162 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 ++I E + +G ++ R ++ A+ H A+A++LAHNHP+G + PS D +T+R+ Sbjct: 163 GRVIKDELVSSGGVSHAVADLRLILAPAITHYASAIILAHNHPTGHLQPSAEDMDLTKRV 222 Query: 118 VQALGLVDIRVPDHLIVG-----------GNQVFSFAEHGLL 148 Q + +IR+ DHLI+G + SFA++GLL Sbjct: 223 KQVASVCNIRLNDHLILGRYHASVTSDGERSHYLSFADNGLL 264 >UniRef50_Q93MC6 DNA repair protein RadC n=1 Tax=Clostridium perfringens RepID=Q93MC6_CLOPE Length = 145 Score = 149 bits (376), Expect = 4e-35, Method: Composition-based stats. Identities = 43/144 (29%), Positives = 76/144 (52%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 ++ + + ++ L E + + ++RE V+ L+ +N++ + Sbjct: 2 KKIDVVKVYVKKEQSLQIEKDIIKKPEQVFEVVKNFLGEVDREYLIVIVLDVKNKINSIS 61 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 GT+N + VHPREV K A+ N A+++LAHNHPSG+ +PSK D IT R+ + L+ Sbjct: 62 VASVGTLNSSIVHPREVFKTAILANGASIILAHNHPSGDTSPSKDDINITTRIKECGVLM 121 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 I + DH+I+G + S G++ Sbjct: 122 GIELLDHVILGDEKFISLKNEGII 145 >UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZ93_ERYRH Length = 235 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 49/146 (33%), Positives = 77/146 (52%), Gaps = 3/146 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHE---PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 M + + + + L R + + +S WL L + E+E FRVL+L+ Q Sbjct: 81 MKQAKCTTLLAVHELLRRIVMPFPGEKIKLSSCDRIVRWLNLEIGFEEQELFRVLFLSTQ 140 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 N LI LF GT +++ VHPR+V + A+ NA+ +VL HNHP G ++ S+AD +T L Sbjct: 141 NNLIRYLDLFKGTADKSLVHPRDVFREAVRCNASRIVLVHNHPGGSLSASEADVEVTRAL 200 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFA 143 ++ ++ I V DH+IV S Sbjct: 201 IEVGMMIGIEVVDHIIVTSTNSVSLR 226 >UniRef50_UPI00016B261F DNA repair protein RadC n=2 Tax=candidate division TM7 RepID=UPI00016B261F Length = 214 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 2/142 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAF-TSTRAAREWLILNMAGLEREEFRVLYLNNQNQ 59 + + +I +L+ R+L + S A E L ++ ++E F L L+ N+ Sbjct: 72 LGEAKIPVIVASLELARRYLLDSDQPIIDSPEKAVELL-SDIRDKKQEYFVCLTLDGANR 130 Query: 60 LIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQ 119 LIA + GT+ + VHPREV A+ AA++++AHNHPSG + S+AD+ +T RL + Sbjct: 131 LIAKRVVTIGTLTASLVHPREVFADAIADRAASIIVAHNHPSGSLEASQADKDVTSRLAE 190 Query: 120 ALGLVDIRVPDHLIVGGNQVFS 141 A L+ I + DH+I+ S Sbjct: 191 AGRLLGITLNDHIIITKTDFVS 212 >UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae RepID=Y1225_NEIG2 Length = 225 Score = 148 bits (375), Expect = 5e-35, Method: Composition-based stats. Identities = 46/142 (32%), Positives = 76/142 (53%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 ++++ + + + + + ++L ++ + E L LN QNQLIA L Sbjct: 83 AVVREIGRRILEEELQEEITLSDPDTVADYLRFHLGQEKVEVSVALLLNRQNQLIAVREL 142 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 GT+ ++ RE++K AL A ++++AHNHP G PS+ D + T RL QA+ LVD+ Sbjct: 143 SRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDIMFTRRLAQAMSLVDV 202 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 + DH IV V SF + GL+ Sbjct: 203 SLLDHFIVTSQTVRSFRQLGLM 224 >UniRef50_B9L1S0 DNA repair protein radC homolog n=4 Tax=Bacteria RepID=B9L1S0_THERP Length = 261 Score = 147 bits (373), Expect = 7e-35, Method: Composition-based stats. Identities = 45/134 (33%), Positives = 70/134 (52%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 + L E + MA LE+E+ RV+ L+ +N+++ T+ G +N Sbjct: 123 RRLALAQPEERPVIRTPEDVYAIAGAEMATLEQEQLRVVLLDTRNRVVRTVTVAQGHVNG 182 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 +V E+ + A+ N A+VL HNHPSG+ TPS+ D +TE V+A L+ I V DHL+ Sbjct: 183 AQVRIAELFREAIRANTPALVLLHNHPSGDPTPSRQDIELTESAVEAGTLLGIEVVDHLV 242 Query: 134 VGGNQVFSFAEHGL 147 +G + S GL Sbjct: 243 IGHGRFCSLRRLGL 256 >UniRef50_B8KU95 DNA repair protein RadC n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KU95_9GAMM Length = 223 Score = 147 bits (373), Expect = 9e-35, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 76/133 (57%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 L S R +L + RE F LYL+++N+LI E LF GTI+ Sbjct: 89 DLLAEAGLYQRDLIASAVECRRFLQRRLGKQRREVFSALYLDSRNRLIVAEDLFAGTIDG 148 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 V PREV++ AL H+AA+V++AHNHPSG + PS+ DR +T RL AL LVDIR+ DH I Sbjct: 149 AAVFPREVVRGALLHDAASVIVAHNHPSGALAPSEQDRQLTRRLSSALSLVDIRLLDHFI 208 Query: 134 VGGNQVFSFAEHG 146 VG S A G Sbjct: 209 VGFGDSVSLASLG 221 >UniRef50_A9BIK5 DNA repair protein RadC n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BIK5_PETMO Length = 222 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 41/137 (29%), Positives = 78/137 (56%), Gaps = 1/137 (0%) Query: 6 RSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGET 65 ++ ++ + + L + TS A +M L E R ++L+++ +I + Sbjct: 78 KAALEIGKRYHLQKLRQKYQKVTSPEEAYHVC-EDMIYLSTETVRAIFLDSKLHIITIKD 136 Query: 66 LFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVD 125 + GT+N + HPR++ + A+ +NA + +L HNHPSG+ TPS DR IT++++ + ++ Sbjct: 137 ISNGTVNMSIAHPRDIFREAIMYNAVSFILVHNHPSGDPTPSMHDRDITKKIMDSGEILG 196 Query: 126 IRVPDHLIVGGNQVFSF 142 I + DH+I+G + FSF Sbjct: 197 INMNDHIIIGKDSYFSF 213 >UniRef50_A6L552 DNA repair protein n=5 Tax=Bacteroidales RepID=A6L552_BACV8 Length = 153 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 3/139 (2%) Query: 13 LKTLDRHLHEPGVAFTSTRAAREWLILNMAGLE---REEFRVLYLNNQNQLIAGETLFTG 69 ++ + + S+ A ++L+ +E F+VL+LN +Q++ + G Sbjct: 15 VELTYKSTSKSRNKIYSSEDAYKYLLPTYKEGTICYKEYFKVLFLNQSSQVLGYTLISEG 74 Query: 70 TINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVP 129 I T V R +++ AL N+ A++LAHNHPSG + PS+ D IT+++ A L+ I V Sbjct: 75 GITDTTVDVRVILQAALLTNSVALILAHNHPSGNLKPSRQDMEITKQVKNAAQLMRITVI 134 Query: 130 DHLIVGGNQVFSFAEHGLL 148 DHLI+ +SFA+ G L Sbjct: 135 DHLILTDAGYYSFADEGQL 153 >UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A4H3_GEMAT Length = 244 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 75/135 (55%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 + + E G+ R + EEF V L+ Q++L + G +N Sbjct: 110 RRMAGEAREAGLPLRGPRDVAAAFAPRLQDAPVEEFHVAILDAQHRLERDVLITRGLLNS 169 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 + VHPREV + A+ AAAV+L HNHPSG+ TPS DR +TE+LV A L+DI V DH+I Sbjct: 170 SLVHPREVFREAIAERAAAVILVHNHPSGDPTPSAEDRAVTEQLVAAGRLLDIPVHDHII 229 Query: 134 VGGNQVFSFAEHGLL 148 VG + SFAE GLL Sbjct: 230 VGRGRYVSFAEAGLL 244 >UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHT1_9DELT Length = 260 Score = 146 bits (370), Expect = 1e-34, Method: Composition-based stats. Identities = 46/135 (34%), Positives = 70/135 (51%) Query: 14 KTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINR 73 + LDR R A +L + ERE F ++ L+ + +++ T+ G++ R Sbjct: 110 RRLDRLDLPMRRPLRHPREAERFLRSLLGDAEREHFMIIGLDARQRVLLVRTIAVGSLTR 169 Query: 74 TEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLI 133 EVHPREV + + A +L HNHPSG+ PS+AD +T R+ + I V DH++ Sbjct: 170 VEVHPREVFRPLVRAGAHTCLLVHNHPSGDARPSEADIELTARMTDIGRFLGIPVLDHVV 229 Query: 134 VGGNQVFSFAEHGLL 148 V N S AE GL+ Sbjct: 230 VSANGFVSLAELGLV 244 >UniRef50_C5NXB5 DNA repair protein RadC homolog n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXB5_9BACL Length = 257 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 2/145 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHEP--GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 + + I ++ R V S ++ +L ++ L +E F VL ++ + Sbjct: 77 IGQEKAIHILANIEFARRIYATNVLDVKCDSPQSIANYLKSSLENLTQEVFVVLDIDTKG 136 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 ++I +F G+++ + VHPREV K A+ ++A+++V HNHPSG+ TPS D T L+ Sbjct: 137 KIIEKREVFKGSLSMSVVHPREVFKLAIKNSASSIVCVHNHPSGDATPSIEDIKTTINLM 196 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFA 143 + +V I + DH++V S Sbjct: 197 EVGEIVGIEMLDHIVVAKKGYVSIR 221 >UniRef50_C0GR82 DNA repair protein RadC n=2 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GR82_9DELT Length = 145 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 1/144 (0%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 ER + L L P +S AA L+ + E F VL+++N+N++I + Sbjct: 3 EREKAKTLLDQLYAMESSPDYVLSSPEAAVIQLLP-FRKKKTENFVVLFVDNKNRMICKK 61 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 + GT+++ V PRE+I+ A+ A+ ++L HNHP G PSK DR +T ++ + + Sbjct: 62 VVAKGTVDQIPVFPREIIRHAILKQASGIILGHNHPGGASEPSKQDRELTSKIKRIAMEL 121 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 IRV DH+I+ + FSF E+G L Sbjct: 122 GIRVLDHIIICDSGHFSFQENGYL 145 >UniRef50_A9B8G6 DNA repair protein RadC n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B8G6_HERA2 Length = 204 Score = 146 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 2/149 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHE--PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQN 58 + ++ A L E G T+ L M+ LE+EE RV+ L+ Q Sbjct: 52 VGRAHAIRLRTAFAIGHAKLAEAVTGEPITTPMQVVALLQAEMSHLEQEELRVISLSTQA 111 Query: 59 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 118 +I T+ GT+N ++ + L NAA+V+LAHNHPSG V S D L+T++ + Sbjct: 112 HIIGMHTVVVGTLNTAYCRMADLFREPLRRNAASVILAHNHPSGMVWASPEDILLTKQAI 171 Query: 119 QALGLVDIRVPDHLIVGGNQVFSFAEHGL 147 QA L++I + DHLI+G S E L Sbjct: 172 QAGQLLEIELLDHLIIGKGGYTSMRERRL 200 >UniRef50_A9NF52 DNA repair protein n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NF52_ACHLI Length = 217 Score = 146 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 41/148 (27%), Positives = 77/148 (52%), Gaps = 3/148 (2%) Query: 1 MTPGERSLIQRALKTLDR---HLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 ++ + + I A++ R T + L +M+ L +E VL L+ + Sbjct: 65 ISDAKATTIIAAVELGRRLSDRKKPVRKMITESSEVYHLLKEDMSYLRKEHLIVLCLDIK 124 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 L+ ET++ GT + +V +++ K A+ A +++ HNHPSG+ TPS+AD +T+ + Sbjct: 125 GNLLKNETIYMGTTSSIQVSVKDLFKSAVRIGAFGIIVVHNHPSGDSTPSQADDKLTKLI 184 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEH 145 A ++ I + DH+I+G N+ FS+ Sbjct: 185 KNAGEVLSIELIDHIIIGRNEFFSYRRQ 212 >UniRef50_B5Y6A0 UPF0758 protein COPRO5265_1522 n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=Y1522_COPPD Length = 235 Score = 145 bits (367), Expect = 3e-34, Method: Composition-based stats. Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 7/155 (4%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGV---AFTSTRAAREW----LILNMAGLEREEFRVLY 53 M + + ++ AL+ R L V T+ A E+ + +E F +L Sbjct: 81 MGKAKAAQVKAALEIGKRFLQNETVEEARITTPEDAIEYAARYFSSMLMNEGKEHFWILL 140 Query: 54 LNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLI 113 L+ +N+ I + G+ +T V P+E++K+ +A A++L HNHPSG+ +PS+ D + Sbjct: 141 LDRKNRPIKHVEISVGSSIQTTVDPKEILKQVSLTSAQALILIHNHPSGDPSPSREDVAV 200 Query: 114 TERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 T++L QA LV ++ DH+IVG NQ S A L+ Sbjct: 201 TKQLKQACELVGAQLLDHIIVGKNQHVSLAREKLI 235 >UniRef50_Q2QJL1 DNA repair protein RadC n=1 Tax=Acetobacter aceti RepID=Q2QJL1_ACEAC Length = 147 Score = 145 bits (366), Expect = 4e-34, Method: Composition-based stats. Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 3/146 (2%) Query: 6 RSLIQRALK---TLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIA 62 R L+ + + R + + +L M +RE+ RVL+LN+Q+QL+A Sbjct: 2 RVLLMLVRESGLRIQRARLQHSGILAEQQQLYAYLRAIMGPEKREQVRVLFLNDQHQLLA 61 Query: 63 GETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALG 122 + + GT++ T V+PRE++ RAL A +VL HNHPSG+ TPS D ++T ++ A Sbjct: 62 DDIMGQGTVDHTPVYPREIVARALQLKATLLVLVHNHPSGDPTPSADDVVMTNQICGAAK 121 Query: 123 LVDIRVPDHLIVGGNQVFSFAEHGLL 148 +++I V DH+IV G ++ E G L Sbjct: 122 IMNIHVWDHIIVAGEKLLCMREAGFL 147 >UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcus RepID=Y1084_STRS2 Length = 246 Score = 145 bits (366), Expect = 4e-34, Method: Composition-based stats. Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 3/148 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHEP---GVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + I+ ++ R + +I + ++E LYLN Q Sbjct: 75 IGRVKAIEIKAMIELGKRINQSELLLNERILGSEKLGRKMIHEIGHKKQEHLVALYLNTQ 134 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 NQ+I+ +T+F G++NR+ PRE++ A+ A ++++ HNHPSG V PS+ D L TE L Sbjct: 135 NQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSVQPSRNDLLFTENL 194 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEH 145 ++ + + + DHLIVG +SF E Sbjct: 195 KESCEKLGLVLLDHLIVGNKDYYSFREE 222 >UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A0L491_MAGSM Length = 241 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 1/142 (0%) Query: 8 LIQRALKTLDR-HLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 ++ + R++L+ MAG E F VL L+ Q +L+ + Sbjct: 94 MLPALTRRYQHDAATRNKTPLNRADNVRDYLVPLMAGRTEEVFYVLCLDAQCRLLFPALV 153 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 GTI + VHPR+V++ + H AA V+LAHNHPSG S+ D L+T L+QAL +D+ Sbjct: 154 TEGTIRQAHVHPRQVVELVIRHKAAHVILAHNHPSGNPKASQDDILLTSHLMQALNPIDV 213 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 +V DHLI+ G +VFSFA G++ Sbjct: 214 QVLDHLIIAGEKVFSFASAGMM 235 >UniRef50_C7GIB3 DNA repair protein RadC n=9 Tax=Bacteria RepID=C7GIB3_9FIRM Length = 179 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 2/138 (1%) Query: 13 LKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTIN 72 ++ + F + + M +RE V+ L + + I G++N Sbjct: 14 VRLVKDAPIYSEHTFNNPADIAAVMGDCMCQFDREVVCVVNLRSDLKPINVHFASVGSLN 73 Query: 73 RTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHL 132 HPRE+ K ++ NAA+++L H HPSG V PSKAD ++T+R+ + L+ I + DH+ Sbjct: 74 EAMAHPRELFKSSILSNAASMMLIHCHPSGNVFPSKADTMMTDRMNKLCELMGIPLIDHI 133 Query: 133 IVGGN--QVFSFAEHGLL 148 IVGG+ + FSF E G++ Sbjct: 134 IVGGDNREFFSFREKGMI 151 >UniRef50_Q0GNI5 Smu18B n=1 Tax=uncultured organism RepID=Q0GNI5_9ZZZZ Length = 154 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 59/146 (40%), Positives = 85/146 (58%) Query: 3 PGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIA 62 P +++ + +R + + S R A L +A E E F V+ LN Q+++IA Sbjct: 9 PAWCRIVRERPEAFEREVLAENLHVRSPRDAVVALAPRLAREEVEVFLVIALNAQHRMIA 68 Query: 63 GETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALG 122 + + G N + VHPREV + A+ AAA+++AHNHPSG+ PS DR +TE+LV A Sbjct: 69 LQEVTRGIQNCSLVHPREVFRIAIAIGAAAIIVAHNHPSGDPAPSADDRAVTEQLVAAGR 128 Query: 123 LVDIRVPDHLIVGGNQVFSFAEHGLL 148 L+D+ V DH+IVG SFAE GLL Sbjct: 129 LLDLPVHDHIIVGAGSYTSFAEAGLL 154 >UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus lactis RepID=Y1515_LACLM Length = 227 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 3/148 (2%) Query: 1 MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREW---LILNMAGLEREEFRVLYLNNQ 57 + + ++ ++ R + +++E+ L M E+E YL+ Q Sbjct: 75 IGQTKAIELRAMIELGKRIQTTTRKRYGQVLSSKEYGMSLAFEMQNFEQEHLTATYLDGQ 134 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 NQ+I +T+F G N PRE++ A+ + + +++AHNHPSG + PS+AD++ T+++ Sbjct: 135 NQIIEKKTIFIGAFNHATASPREILYHAVKNLSVGLLVAHNHPSGNLQPSQADKIFTKKI 194 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEH 145 A + I DH+IVG +SF E Sbjct: 195 KNACDNIGINFIDHIIVGAGNYYSFRER 222 >UniRef50_A8RIH3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RIH3_9CLOT Length = 178 Score = 144 bits (365), Expect = 6e-34, Method: Composition-based stats. Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 1/125 (0%) Query: 25 VAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKR 84 FT A E + +RE VL LN + + A E G +N + R++ K Sbjct: 46 TRFTDPGMAAEMVWPLFEMADREMALVLSLNTKLEPQALEIAAVGGLNACSIDCRDIFKH 105 Query: 85 ALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGN-QVFSFA 143 A+ +NAA ++ HNHPSG+ PS DR +T+RL + ++ I + DH+IVG +SF Sbjct: 106 AVLNNAAFIICFHNHPSGDPKPSMEDRKLTKRLEECGKILGIPLIDHIIVGEGPCCYSFK 165 Query: 144 EHGLL 148 E G+L Sbjct: 166 EQGML 170 >UniRef50_D1PFM8 DNA repair protein RadC n=1 Tax=Prevotella copri DSM 18205 RepID=D1PFM8_9BACT Length = 218 Score = 144 bits (365), Expect = 6e-34, Method: Composition-based stats. Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 3/151 (1%) Query: 1 MTPGERSLIQRALKTLDRHLHE---PGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQ 57 + + +Q A++ R+ E S+ A +L ++ LE EE +L +N Sbjct: 66 IGDSKAIALQAAIELGKRYSLENMAERPDLGSSLAIYNFLYPHVKDLEVEECHLLLMNQN 125 Query: 58 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERL 117 +LI + G I T V R +++ A+ +NA + +AHNHPS PSKAD ++T+ + Sbjct: 126 FRLIKHVPMSHGGITETAVDVRRIMREAVLNNATILAIAHNHPSNSPHPSKADDMLTKSV 185 Query: 118 VQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 +A ++ I DH+I+ FS+ + G L Sbjct: 186 KEACSIMRIFFMDHVIIADGCYFSYHDKGRL 216 >UniRef50_UPI0001BC305A putative DNA primase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC305A Length = 717 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 1/144 (0%) Query: 6 RSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGET 65 L Q A++ ++ AA + + +RE V+ L + I Sbjct: 27 HRLNQVAIRMVEMPPLFSEEPMNGPAAAVKVMADTFRDYDREVVAVVNLRADMRPININI 86 Query: 66 LFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVD 125 G ++++ HPRE++K + NAAA++L HNHPSG + PS D +T+R+ + L+ Sbjct: 87 ASIGALDQSIAHPREILKSTILSNAAAIILVHNHPSGRLAPSVEDIGLTDRMNKICDLIG 146 Query: 126 IRVPDHLIVG-GNQVFSFAEHGLL 148 +++ DH+IVG GN+ +SF E + Sbjct: 147 VKLVDHIIVGPGNEFYSFQEKNQM 170 >UniRef50_A8ZYJ4 DNA repair protein RadC n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYJ4_DESOH Length = 167 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 47/127 (37%), Positives = 78/127 (61%), Gaps = 2/127 (1%) Query: 23 PGVAFTSTRAAREWLILNMAG-LEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREV 81 G +S + + A + E LYL+ +N+++A E +FTG+++ T V+PRE+ Sbjct: 25 RGQEISSAQEVYNIMKPVFAETDDVETLYCLYLDTKNRILAMEKMFTGSLSSTAVYPREI 84 Query: 82 IKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFS 141 IKR + ++AVV+ HNHP+G+ PS D IT RL+ AL +++ + DH+IVG +S Sbjct: 85 IKRVIALKSSAVVITHNHPTGDPGPSVEDTRITIRLLVALKSMNVDLHDHIIVGEG-YYS 143 Query: 142 FAEHGLL 148 FA+ G++ Sbjct: 144 FADAGVI 150 >UniRef50_C7VI58 DNA repair protein RadC n=3 Tax=Bacilli RepID=C7VI58_ENTFA Length = 117 Score = 143 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 49/109 (44%), Positives = 71/109 (65%), Gaps = 1/109 (0%) Query: 41 MAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHP 100 + +RE F V+ LN +N ++A G++N + VHPREV K A+ +NAA+V++AH HP Sbjct: 9 IGRDDREVFFVMCLNTRNNVVAVLRCHVGSLNASLVHPREVFKSAILNNAASVIVAHQHP 68 Query: 101 SGEVTPSKADRLITERLVQALGLVDIRVPDHLIV-GGNQVFSFAEHGLL 148 S ++TPSK D +T+RLV+A L+DI V DHL+V N S E G + Sbjct: 69 SDDITPSKEDINVTKRLVEAGKLLDIEVLDHLVVNSDNGFTSLKERGYI 117 >UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia RepID=Q2GEH3_NEOSM Length = 236 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 49/142 (34%), Positives = 77/142 (54%) Query: 7 SLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETL 66 ++ ++K + R S ++ ++L L++ E RVL+LN + LI Sbjct: 95 RTVRESMKAILRKDLTSRTTLKSWKSVVDYLRLSIGNKPVETIRVLFLNKKYTLIREYVQ 154 Query: 67 FTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDI 126 G + T + RE+IK+ L A+A+V+AHNHPSG PS+ D LIT +L + VD+ Sbjct: 155 ELGAADHTPLCMREIIKKCLTCGASAMVIAHNHPSGNPLPSQEDLLITGKLKKICQKVDV 214 Query: 127 RVPDHLIVGGNQVFSFAEHGLL 148 ++ DH IV + FSF +GLL Sbjct: 215 QLVDHFIVTPHDHFSFVVNGLL 236 >UniRef50_A1BGW3 DNA repair protein RadC n=2 Tax=Chlorobium RepID=A1BGW3_CHLPD Length = 166 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 2/134 (1%) Query: 17 DRHLHEPGVAFTSTRAAREWLI-LNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTE 75 + + T + + L EE V +L+ +N + + + GT+N + Sbjct: 32 ESQVLYDNKKITVAADICSICNTIGLPDLPHEELHVFFLSTKNYITGTQLVSRGTLNASL 91 Query: 76 VHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVG 135 +HPREV + A+ NA A++L HNHPSG PS AD+ +T+++ + ++ I + DH+I+G Sbjct: 92 IHPREVFRGAILANANAIILVHNHPSGNPEPSNADKQVTKQIRSSADIIGIELLDHVIIG 151 Query: 136 GNQ-VFSFAEHGLL 148 N FSF + GL Sbjct: 152 SNGNHFSFRQEGLF 165 >UniRef50_B6AT60 DNA repair protein RadC n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AT60_9RHOB Length = 253 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 58/144 (40%), Positives = 84/144 (58%) Query: 5 ERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGE 64 + L+ A K + + +S A + ++A E EEF VL+LN +N LIA E Sbjct: 110 DLKLVFGASKRMAKARIAHRPLISSWDAVLTYCRTSLAHKETEEFHVLFLNRRNMLIADE 169 Query: 65 TLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLV 124 TL GT++ V+PREV+KRAL N+ A++L HNHPSG+ +PS +D +T+ + QA + Sbjct: 170 TLGVGTVDHVPVYPREVLKRALELNSCAIILVHNHPSGDPSPSSSDIEMTKLIKQAADSL 229 Query: 125 DIRVPDHLIVGGNQVFSFAEHGLL 148 I + DHLI+G SF GLL Sbjct: 230 SITLHDHLIIGATGETSFVSEGLL 253 >UniRef50_C4G572 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G572_ABIDE Length = 314 Score = 141 bits (357), Expect = 5e-33, Method: Composition-based stats. Identities = 41/137 (29%), Positives = 74/137 (54%), Gaps = 1/137 (0%) Query: 10 QRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTG 69 + A++ ++ + F A + + + +RE F V+ L Q I + G Sbjct: 22 EVAIRMVEMPPLLSDIPFDGPEEAAKAMADLLKDYDREVFAVVNLRTNGQPINMNIVSIG 81 Query: 70 TINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVP 129 T++ + +PRE++K + NA AV+L HNHPSG + PS+ D +IT ++ L+ I++ Sbjct: 82 TLDSSLTNPREILKSMVLSNAFAVMLFHNHPSGNLNPSREDFIITNKMNDICNLIGIKLW 141 Query: 130 DHLIVG-GNQVFSFAEH 145 DH+I+G G++ +SF Sbjct: 142 DHIIIGPGDEFYSFHAE 158 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.171 0.493 Lambda K H 0.267 0.0523 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,096,149,532 Number of Sequences: 3077464 Number of extensions: 52220443 Number of successful extensions: 127844 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1125 Number of HSP's successfully gapped in prelim test: 30 Number of HSP's that attempted gapping in prelim test: 126507 Number of HSP's gapped (non-prelim): 1166 length of query: 148 length of database: 1,040,396,356 effective HSP length: 111 effective length of query: 37 effective length of database: 698,797,852 effective search space: 25855520524 effective search space used: 25855520524 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 88 (38.2 bits)