 |
| Job Description | P06612 | | Confidence | 36.58% | Date | Thu Jan 5 10:59:12 GMT 2012 |
| Rank | 194 | Aligned Residues | 45 |
| % Identity | 13% | Template | d1okra_ |
| SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Penicillinase repressor
|
| Resolution | 2.4 |
|
|   |   |
283 | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
P | F | I | T | S | T | L | Q | Q | A | A | S | T | R | L | G | F | G | V | K | K | T | M | M | M | A | Q | R | L | Y | E | A | G | Y | I | T | Y | M | R | T | D | S | T | N | L |
| Query Conservation |   |
|
|   |
|
|   |
|
|   |   |
|
|   |   |
|
|   |
|
|   |   |
|
|   |
|
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |   |
|   |
|
|
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |
| Template Sequence |   |
Y | A | S | A | N | N | I | I | E | E | I | Q | M | Q | K | D | W | S | P | K | T | I | R | T | L | I | T | R | L | Y | K | K | G | F | I | D | R | K | K | D | N | K | I | F | Q |
| Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |  |  | T | T |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|