28 d1juba_ Probab=99.67   E-value=2.1e-13  Score=102.72  Aligned_columns=243  Identities=16%

Q ss_pred             EEECCEEECCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCEEECCCCCCCCC-----------CCCCCCH
Q ss_conf             65789897378898865478638988988989999999851997899830661774478899-----------8626899
Q batch____        10 LKVGAITAANRIFMAPLTRLRSIEPGDIPTPLMAEYYRQRASAGLIISEATQISAQAKGYAG-----------APGIHSP   78 (365)
Q Consensus        10 ~~ig~~~lkNRiv~~pm~~~~~~~~g~~~~~~~~~~y~~ra~~Glii~e~~~v~~~~~~~~~-----------~~~l~~d   78 (365)
                      .+|+++++||.|+.+||...         +.....-....+++|.+++..+..++.......           ..+..+.
T Consensus         4 ~~~~G~~l~~Pi~~a~~~~~---------~~~~~~~~~~~~g~g~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (311)
T d1juba_           4 TTFANAKFANPFMNASGVHC---------MTIEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNL   74 (311)
T ss_dssp             EEETTEEESSSEEECTTSSC---------SSHHHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBS
T ss_pred             EEECCEEECCCEEECCCCCC---------CCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCHHHHHHHCCCCCCCCCCCH
T ss_conf             99999982696787777887---------998999999965998898324481100178343555531123001457716


Q ss_pred             HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             99999999999998619916873431343255666856777506765446666555554544345677767638999999
Q batch____        79 EQIAAWKKITAGVHAENGHMAVQLWHTGRISHASLQPGGQAPVAPSALSAGTRTSLRDENGQAIRVETSMPRALELEEIP  158 (365)
Q Consensus        79 ~~i~~~~~l~~~vh~~g~~~~~QL~H~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~  158 (365)
                      ..-...+.+...+.+.+....+-.+=.|..                                                  
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~pi~~~i~~~~--------------------------------------------------  104 (311)
T d1juba_          75 GFDYYLDYVLKNQKENAQEGPIFFSIAGMS--------------------------------------------------  104 (311)
T ss_dssp             CHHHHHHHHHHHHHHTCSSSCCEEEECCSS--------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHCCCCEEEEECCCCC--------------------------------------------------
T ss_conf             689999999999986278946999716899--------------------------------------------------


Q ss_pred             HHHHHHHHHHHHHHHCC-CCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf             99999999999999749-98999964760578741266668376775888888677899999999986497707999710
Q batch____       159 GIVNDFRQAIANAREAG-FDLVELHSAHGYLLHQFLSPSSNHRTDQYGGSVENRARLVLEVVDAGIEEWGADRIGIRVSP  237 (365)
Q Consensus       159 ~ii~~f~~aA~ra~~aG-fDgVeIh~ahGyLl~qFlSp~~N~RtDeYGGs~enR~R~~~Eii~air~~vg~~~i~vris~  237 (365)
                        .++|.+.++++.++| .|++|+|..+              .....+.++......+.++++.+++.+ +.++.+|++ 
T Consensus       105 --~~~~~~~~~~~~~~~~a~~i~in~~~--------------~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~pv~~k~~-  166 (311)
T d1juba_         105 --AAENIAMLKKIQESDFSGITELNLSC--------------PNVPGEPQLAYDFEATEKLLKEVFTFF-TKPLGVKLP-  166 (311)
T ss_dssp             --HHHHHHHHHHHHHSCCCSEEEEESCC--------------CCSSSCCCGGGCHHHHHHHHHHHTTTC-CSCEEEEEC-
T ss_pred             --HHHHHHHHHHHHHCCCCCEEECCCCC--------------CCCCCCHHHHCCHHHHHHHHHHHHHHC-CCCEEECCC-
T ss_conf             --89999999876523589877337866--------------554320032049899999999999722-894110104-


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCC-------------------------CCHHHHHHHHHH
Q ss_conf             1143456788999999999999953269859991268855787-------------------------530899999998
Q batch____       238 IGTFQNTDNGPNEEADALYLIEQLGKRGIAYLHMSEPDWAGGE-------------------------PYTDAFREKVRA  292 (365)
Q Consensus       238 ~~~~~~~~~~~~~~~e~~~l~~~l~~~Gid~i~vs~~~~~~~~-------------------------~~~~~~~~~ik~  292 (365)
                               ...........++.+.+.|+|.+.++........                         +...+....+++
T Consensus       167 ---------~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~a~~~~~~~~~  237 (311)
T d1juba_         167 ---------PYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYT  237 (311)
T ss_dssp             ---------CCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHT
T ss_pred             ---------CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             ---------77764002999988873798699970886532102232100001334445664641104689999999888


Q ss_pred             HH--CCCEEEECCC-CHHHHHHHHHCCCCCEEEECCHHHHC-HHHHHHHHC
Q ss_conf             72--9989992788-99999999978998799984377507-317999985
Q batch____       293 RF--HGPIIGAGAY-TVEKAETLIGKGLIDAVAFGRDWIAN-PDLVARLQR  339 (365)
Q Consensus       293 ~v--~ipVi~~G~i-t~e~ae~~l~~g~aD~V~lgR~~lad-P~l~~k~~~  339 (365)
                      .+  ++|||++|++ +.+++.++|+.| ||+|++||+++.+ |+++.++.+
T Consensus       238 ~~~~~ipii~~GGI~~~~dv~k~l~lG-AdaV~igta~~~~g~~~~~~i~~  287 (311)
T d1juba_         238 RLKPEIQIIGTGGIETGQDAFEHLLCG-ATMLQIGTALHKEGPAIFDRIIK  287 (311)
T ss_dssp             TSCTTSEEEEESSCCSHHHHHHHHHHT-CSEEEECHHHHHHCTHHHHHHHH
T ss_pred             HCCCCCEEEEECCCCCHHHHHHHHHCC-CCEEEECHHHHHCCHHHHHHHHH
T ss_conf             507896699947879999999999729-98999927888525899999999