236 c1sjaA_ Probab=97.16   E-value=0.0093  Score=37.11  Aligned_columns=119  Identities=20%

Q ss_pred             HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCE-EEEEEEECC
Q ss_conf             9999999999997499899996476057874126666837677588888867789999999998649770-799971011
Q batch____       161 VNDFRQAIANAREAGFDLVELHSAHGYLLHQFLSPSSNHRTDQYGGSVENRARLVLEVVDAGIEEWGADR-IGIRVSPIG  239 (365)
Q Consensus       161 i~~f~~aA~ra~~aGfDgVeIh~ahGyLl~qFlSp~~N~RtDeYGGs~enR~R~~~Eii~air~~vg~~~-i~vris~~~  239 (365)
                      .++.++.+..+++.||..+-|+.+.                           .--++.++++|+.+|++. +.+=.+   
T Consensus       142 ~~~~~~~~~~~~~~G~~~~KiKig~---------------------------~~d~~~i~~ir~~~g~~~~l~vDaN---  191 (368)
T c1sjaA_         142 IPQLLDVVGGYLDEGYVRIKLKIEP---------------------------GWDVEPVRAVRERFGDDVLLQVDAN---  191 (368)
T ss_dssp             HHHHHHHHHHHHHHTCSCEEEECBT---------------------------TBSHHHHHHHHHHHCSSSCEEEECT---
T ss_pred             HHHHHHHHHHHHHCCCCEEEEECCH---------------------------HHHHHHHHHHHHHCCCCCEEEEECC---
T ss_conf             9999999999996799799997787---------------------------7999999999996499978999768---


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCC-CHHHHHHHHHCCCC
Q ss_conf             43456788999999999999953269859991268855787530899999998729989992788-99999999978998
Q batch____       240 TFQNTDNGPNEEADALYLIEQLGKRGIAYLHMSEPDWAGGEPYTDAFREKVRARFHGPIIGAGAY-TVEKAETLIGKGLI  318 (365)
Q Consensus       240 ~~~~~~~~~~~~~e~~~l~~~l~~~Gid~i~vs~~~~~~~~~~~~~~~~~ik~~v~ipVi~~G~i-t~e~ae~~l~~g~a  318 (365)
                             +..+.+++.++.+ +++.++.+++=-.+      +...+-.+.+++.+.+||+..=.. ++++..++++.+.+
T Consensus       192 -------~~~~~~~a~~l~~-l~~~~i~~iEeP~~------~~d~~~~~~l~~~~~~pia~dEs~~~~~~~~~~~~~~~~  257 (368)
T c1sjaA_         192 -------TAYTLGDAPQLAR-LDPFGLLLIEQPLE------EEDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAV  257 (368)
T ss_dssp             -------TCBCGGGHHHHHT-TGGGCCSCEECCBC------TTCHHHHHHHTTTCSSCEEESTTCCSHHHHHHHHHHTCC
T ss_pred             -------CCCCHHHHHHHHH-HCCCCCEEECCCCC------CCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCC
T ss_conf             -------8898999999997-33388158118888------067888999998749829847764899999999972999


Q ss_pred             CEEEE
Q ss_conf             79998
Q batch____       319 DAVAF  323 (365)
Q Consensus       319 D~V~l  323 (365)
                      |.|-+
T Consensus       258 d~i~~  262 (368)
T c1sjaA_         258 QIVNI  262 (368)
T ss_dssp             SEEEE
T ss_pred             CEEEE
T ss_conf             79981