37 c3polA_ Probab=99.93   E-value=7.3e-25  Score=159.30  Aligned_columns=238  Identities=13%

Q ss_pred             CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCEEHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCHHHH
Q ss_conf             93102766399993698874431001179830111672757999999998479977999937988999998512200122
Q batch____         1 MAAINTKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEA   80 (302)
Q Consensus         1 ~~~~~~~i~kaiIlAaG~GtRl~p~t~~~PK~llpi~gkpiid~~l~~l~~agi~~i~iv~~~~~~~i~~~~~~~~~~~~   80 (302)
                      |.-=++|-+-+||+|||.||||.      ||||+||+|||||+|+++++..+|+.+.++|+++..+........      
T Consensus         3 ~~~~~~~~~~vIi~A~~~s~Rl~------~K~Ll~v~Gkpli~~~i~~l~~~~~~~~iiVv~~~~~~~~~~~~~------   70 (262)
T c3polA_           3 IDDDDKHMKHIVIPARFSSSRLP------GKPLLLIHDRPMILRVVDQAKKVEGFDDLCVATDDERIAEICRAE------   70 (262)
T ss_dssp             SSCTTCCCEEEEEECCSCCTTST------TGGGSEETTEEHHHHHHHHHTTCCSCSEEEEEESCHHHHHHHHTT------
T ss_pred             CCCHHCCCEEEEEECCCCCCCCC------CCEEEEECCEEHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHC------
T ss_conf             67000887599994487788998------711443685657999999998489982899976958889999753------


Q ss_pred             HHCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHC--CCCCEEEEECCEEEECCHHHHHHHHHHHHHHH
Q ss_conf             2102342001343201244586799984298584589999877527--99859999488488468689758999999998
Q batch____        81 MLEKRVKRQLLDEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVV--GDEPVAVILPDVILDEYESDLSQDNLAEMIRR  158 (302)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~q~~~~Gta~ai~~a~~~~--~~e~~lv~~~D~i~~~~~~~~~~~~l~~~~~~  158 (302)
                                          +..+.+..++.+.++++++..+....  ..+.++++.+|+.+..      ...+...++.
T Consensus        71 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~d~p~i~------~~~i~~~~~~  124 (262)
T c3polA_          71 --------------------GVDVVLTSADHPSGTDRLSEVARIKGWDADDIIVNVQGDEPLLP------AQLVQQVAKL  124 (262)
T ss_dssp             --------------------TCEEEECCSCCCCHHHHHHHHHHHHTCCTTCEEEECCTTCTTCC------HHHHHHHHHH
T ss_pred             --------------------CCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCEEEC------HHHHHHHHHH
T ss_conf             --------------------99499964887651268999998500468988999828953335------9999999999


Q ss_pred             HHCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEE-----------EECCCCCCCCCEEEEEEEEEECHHHHHH
Q ss_conf             62279589999965888755189967866556763156788-----------9878766776209999888458899987
Q batch____       159 FDETGHSQIMVEPVADVTAYGVVDCKGVELAPGESVPMVGV-----------VEKPKADVAPSNLAIVGRYVLSADIWPL  227 (302)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~~~~~v~~~-----------~eKp~~~~~~~~l~~~Giyi~~~~i~~~  227 (302)
                      +.....................-.........+...++..+           ............+.++|+|.|....+..
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  204 (262)
T c3polA_         125 LVDKPNCSMSTLCEPIHALDEFQRDSIVKVVMSKQNEALYFSRATIPYDRDGAKRDEPTLHTQAFRHLGLYAYRVSLLQE  204 (262)
T ss_dssp             HHHCTTCSEEEEEEECCCHHHHHCTTSCEEEECSSSBEEEEESSCCSCCSSSSSSSSCCCCSCCEEEEEEEEEEHHHHHH
T ss_pred             HHHCCCCEEEEEEEECCCHHHCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHCCCHHHHHCCHHHHHHHHHHH
T ss_conf             99769935756445404876706777128998689958773023442222210123220121012111213322999998


Q ss_pred             HHHCCCCCCCCEEHHHHHHHHHHCCCEEEEEECCE-EEECCCHHHHHHHH
Q ss_conf             78468888885248999999985198389995215-88679978999999
Q batch____       228 LAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGK-SHDCGNKLGYMQAF  276 (302)
Q Consensus       228 l~~~~~~~~~e~~l~d~l~~l~~~~~v~~~~~~g~-w~dig~p~~y~~A~  276 (302)
                      +.....+........+.++.+....+|.+++.++. |+||+||+||-+|.
T Consensus       205 ~~~~~~~~~e~~~~~~~l~~i~~g~~v~~~~~~~~~~~dIdtpeDL~~ae  254 (262)
T c3polA_         205 YVTWEMGKLEKLESLEQLRVLENGHRIAIAVAEANLPPGVDTQADLDRLN  254 (262)
T ss_dssp             HTTSCCCHHHHHHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHH
T ss_pred             HHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHH
T ss_conf             76048762013445778999968980699981620200688999999999