52 c1nijA_ Probab=97.48   E-value=0.0011  Score=43.22  Aligned_columns=72  Identities=26%

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEC--------CCCEEECCCCEEEEECC-----CCCCCHHHHHHHHHCC
Q ss_conf             8999818999988999999984585686699972--------74201269940888238-----6688999999998506
Q batch____       244 IILVTGPTGSGKSTTLYAILSALNTPGRNILTVE--------DPVEYELEGIGQTQVNT-----RVDMSFARGLRAILRQ  310 (493)
Q Consensus       244 lilvtGpTGSGKTTtl~a~l~~~~~~~~~I~tiE--------DPvE~~~~~i~Q~~v~~-----~~g~~f~~~lr~~LR~  310 (493)
                      +.+|||--||||||++..+++.  ..+.++..|+        |-.-..-.+....++..     ....+|..+|..++..
T Consensus         5 v~iitGfLGaGKTTll~~ll~~--~~~~~~avi~Nefg~~~iD~~ll~~~~~~v~~l~~GCiCC~~~~~~~~~l~~l~~~   82 (317)
T c1nijA_           5 VTLLTGFLGAGKTTLLRHILNE--QHGYKIAVIENEFGEVSVDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLLDN   82 (317)
T ss_dssp             EEEEEESSSSSCHHHHHHHHHS--CCCCCEEEECSSCCSCCEEEEEECTTSCEEEEETTSCEEECTTSCHHHHHHHHHHH
T ss_pred             EEEECCCCCCCHHHHHHHHHHC--CCCCEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCCEECCCHHHHHHHHHHHHHH
T ss_conf             8998089888988999999842--69973899971664442058898407972999779954213247789999999984


Q ss_pred             ------CCCEEEE
Q ss_conf             ------9989997
Q batch____       311 ------DPDVVMV  317 (493)
Q Consensus       311 ------dPDvI~v  317 (493)
                            .||.|+|
T Consensus        83 ~~~~~~~~d~i~I   95 (317)
T c1nijA_          83 LDKGNIQFDRLVI   95 (317)
T ss_dssp             HHHTSCCCSEEEE
T ss_pred             HCCCCCCCCEEEE
T ss_conf             1255468668998