BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (378 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_D2A808 Putative uncharacterized protein n=2 Tax=Enterob... 775 0.0 UniRef50_B2VDD5 Ribosomal RNA large subunit methyltransferase G ... 512 e-144 UniRef50_A1JR10 Ribosomal RNA large subunit methyltransferase G ... 491 e-137 UniRef50_Q3IHQ6 Ribosomal RNA large subunit methyltransferase G ... 355 1e-96 UniRef50_A1SX22 Ribosomal RNA large subunit methyltransferase G ... 346 7e-94 UniRef50_Q15YR1 Ribosomal RNA large subunit methyltransferase G ... 326 8e-88 UniRef50_Q488Q3 Ribosomal RNA large subunit methyltransferase G ... 326 1e-87 UniRef50_UPI0000E0E42F Putative ribosomal RNA small subunit meth... 313 8e-84 UniRef50_Q6LTZ3 Ribosomal RNA large subunit methyltransferase G ... 308 2e-82 UniRef50_B1VMX8 Ribosomal RNA large subunit methyltransferase G ... 303 5e-81 UniRef50_D1XLW4 rRNA (Guanine-N(2)-)-methyltransferase n=5 Tax=S... 303 8e-81 UniRef50_B4RZB4 Ribosomal RNA large subunit methyltransferase G ... 301 2e-80 UniRef50_A0YBC4 Putative ribosomal RNA small subunit methyltrans... 287 4e-76 UniRef50_Q1K1R5 RRNA (Guanine-N(2)-)-methyltransferase n=2 Tax=P... 284 4e-75 UniRef50_A4VI28 Ribosomal RNA large subunit methyltransferase G ... 280 9e-74 UniRef50_A5F5X3 Ribosomal RNA large subunit methyltransferase G ... 276 8e-73 UniRef50_B0TR07 Ribosomal RNA large subunit methyltransferase G ... 271 3e-71 UniRef50_Q4ZNG3 Ribosomal RNA large subunit methyltransferase G ... 265 2e-69 UniRef50_B5JW57 Ribosomal ribonucleate guanine-2-methyltransfera... 253 6e-66 UniRef50_A0L9S5 Ribosomal RNA large subunit methyltransferase G ... 231 3e-59 UniRef50_Q0VPK2 Ribosomal RNA large subunit methyltransferase G ... 207 7e-52 UniRef50_Q1N4Z1 RRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=B... 182 1e-44 UniRef50_A4BHH5 Putative uncharacterized protein n=1 Tax=Reineke... 169 2e-40 UniRef50_B7RVB2 Ribosomal protein L11 methyltransferase, putativ... 163 1e-38 UniRef50_A1U203 Methyltransferase small n=2 Tax=Marinobacter Rep... 161 4e-38 UniRef50_A3J9J3 Nucleotide methyltransferase, putative n=1 Tax=M... 133 1e-29 UniRef50_A9WVF5 16S rRNA m(2)G 966 methyltransferase n=1 Tax=Ren... 132 2e-29 UniRef50_D1BFL3 16S rRNA m(2)G 1207 methyltransferase n=7 Tax=Ba... 129 2e-28 UniRef50_B8H9N3 Methyltransferase small n=10 Tax=Actinomycetales... 125 2e-27 UniRef50_C7R392 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=J... 122 3e-26 UniRef50_A3WQL8 16S RNA G1207 methylase RsmC n=1 Tax=Idiomarina ... 112 2e-23 UniRef50_D1YE28 Methyltransferase small domain protein n=3 Tax=P... 110 8e-23 UniRef50_A7MUT5 Ribosomal RNA small subunit methyltransferase C ... 110 1e-22 UniRef50_D1BX92 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=X... 109 1e-22 UniRef50_D0SZB9 16S RNA methylase RsmC n=1 Tax=Acinetobacter lwo... 107 7e-22 UniRef50_A1SZ19 Ribosomal RNA small subunit methyltransferase C ... 107 7e-22 UniRef50_D2T448 Ribosomal RNA small subunit methyltransferase n=... 102 2e-20 UniRef50_C5CBM4 16S RNA G1207 methylase RsmC n=2 Tax=Micrococcus... 101 5e-20 UniRef50_C9NP08 Ribosomal RNA small subunit methyltransferase C ... 101 5e-20 UniRef50_Q65S65 Ribosomal RNA small subunit methyltransferase C ... 98 6e-19 UniRef50_A3D8E4 Ribosomal RNA small subunit methyltransferase C ... 97 7e-19 UniRef50_A9B5U4 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=H... 97 1e-18 UniRef50_UPI0000E105EB rRNA (guanine-N(2)-)-methyltransferase n=... 96 2e-18 UniRef50_C7MEY2 16S RNA G1207 methylase RsmC n=1 Tax=Brachybacte... 95 4e-18 UniRef50_Q7MZN0 Ribosomal RNA small subunit methyltransferase C ... 95 5e-18 UniRef50_Q1QUF2 Ribosomal RNA small subunit methyltransferase C ... 94 6e-18 UniRef50_Q1MZV1 Ribosomal RNA small subunit methyltransferase C ... 94 6e-18 UniRef50_B4S2L3 Ribosomal RNA small subunit methyltransferase C ... 94 6e-18 UniRef50_C4LB19 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=T... 94 1e-17 UniRef50_Q2NW11 Ribosomal RNA small subunit methyltransferase C ... 94 1e-17 UniRef50_A2BME9 Predicted Methyltransferase n=1 Tax=Hyperthermus... 93 2e-17 UniRef50_C6APC6 Ribosomal RNA small subunit methyltransferase C ... 92 3e-17 UniRef50_A8LQD1 Ribosomal RNA small subunit methyltransferase C ... 91 5e-17 UniRef50_Q3ILJ2 Ribosomal RNA small subunit methyltransferase C ... 89 2e-16 UniRef50_Q2SJX3 Ribosomal RNA small subunit methyltransferase C ... 89 3e-16 UniRef50_Q47VN0 Ribosomal RNA small subunit methyltransferase C ... 89 3e-16 UniRef50_Q6FE96 Ribosomal RNA small subunit methyltransferase C ... 89 3e-16 UniRef50_B9Y2U0 Putative uncharacterized protein n=1 Tax=Holdema... 89 3e-16 UniRef50_A0LDZ4 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=M... 89 3e-16 UniRef50_B6AVZ4 Methyltransferase small n=1 Tax=Rhodobacterales ... 89 3e-16 UniRef50_A3V764 Methyltransferase, putative n=3 Tax=Rhodobactera... 89 4e-16 UniRef50_C4K8X0 Ribosomal RNA small subunit methyltransferase C ... 88 6e-16 UniRef50_Q1GDK1 Methyltransferase small n=13 Tax=Rhodobacteracea... 87 1e-15 UniRef50_A5VYJ3 Ribosomal RNA small subunit methyltransferase C ... 86 2e-15 UniRef50_C5QUQ6 16S rRNA methyltransferase n=3 Tax=Staphylococcu... 86 2e-15 UniRef50_Q67JT6 Putative uncharacterized protein n=1 Tax=Symbiob... 85 4e-15 UniRef50_A4WPY7 16S rRNA m(2)G 1207 methyltransferase n=5 Tax=Rh... 85 5e-15 UniRef50_Q15ZS7 Ribosomal RNA small subunit methyltransferase C ... 85 5e-15 UniRef50_A0KPP9 Ribosomal RNA small subunit methyltransferase C ... 84 8e-15 UniRef50_A8R9R0 Putative uncharacterized protein n=1 Tax=Eubacte... 83 2e-14 UniRef50_A1B2V8 Methyltransferase small n=8 Tax=Rhodobacterales ... 82 3e-14 UniRef50_B8D5U1 Ribosomal RNA small subunit methyltransferase C ... 82 4e-14 UniRef50_A6VRG3 Ribosomal RNA small subunit methyltransferase C ... 82 4e-14 UniRef50_P37872 Uncharacterized protein ybxB n=163 Tax=cellular ... 81 5e-14 UniRef50_A0NLD9 Ribosomal RNA small subunit methyltransferase C ... 81 6e-14 UniRef50_D2LVZ2 Methyltransferase small n=1 Tax=Bacillus cellulo... 81 7e-14 UniRef50_A3DND7 Methyltransferase small n=1 Tax=Staphylothermus ... 80 1e-13 UniRef50_A6FBK7 16S RNA G1207 methylase RsmC n=1 Tax=Moritella s... 80 1e-13 UniRef50_Q11BC2 Methyltransferase small n=2 Tax=Phyllobacteriace... 80 1e-13 UniRef50_A1AW50 Methyltransferase small n=5 Tax=Gammaproteobacte... 80 1e-13 UniRef50_Q5R049 Ribosomal RNA small subunit methyltransferase C ... 80 1e-13 UniRef50_D2MPQ8 Methyltransferase small domain protein n=1 Tax=B... 80 1e-13 UniRef50_A3DJK4 Methyltransferase small n=3 Tax=Clostridium ther... 80 2e-13 UniRef50_UPI00016C52FC methyltransferase small n=1 Tax=Gemmata o... 77 1e-12 UniRef50_Q0VP64 Ribosomal RNA small subunit methyltransferase C ... 76 2e-12 UniRef50_A4YCT3 Methyltransferase small n=13 Tax=Sulfolobaceae R... 76 2e-12 UniRef50_B5JVE3 Ribosomal RNA small subunit methyltransferase C ... 75 4e-12 UniRef50_UPI000051043F putative methyltransferase n=1 Tax=Brevib... 75 5e-12 UniRef50_UPI0000382BBF COG2813: 16S RNA G1207 methylase RsmC n=1... 74 8e-12 UniRef50_C6XLQ7 Methyltransferase small n=1 Tax=Hirschia baltica... 74 8e-12 UniRef50_P57413 Ribosomal RNA small subunit methyltransferase C ... 74 1e-11 UniRef50_B5KCF3 Possible ribosomal RNA small subunit methyltrans... 73 1e-11 UniRef50_Q0FKY0 Methyltransferase, putative n=1 Tax=Roseovarius ... 73 2e-11 UniRef50_D2R2V9 Methyltransferase small n=1 Tax=Pirellula staley... 73 2e-11 UniRef50_Q0C459 Putative methyltransferase n=1 Tax=Hyphomonas ne... 72 3e-11 UniRef50_A5WBH5 Methyltransferase small n=5 Tax=Gammaproteobacte... 72 4e-11 UniRef50_Q02YD3 16S RNA G1207 methylase RsmC n=110 Tax=Bacilli R... 71 6e-11 UniRef50_Q72L94 Ribosomal RNA small subunit methyltransferase C ... 71 7e-11 UniRef50_Q58292 Protein MJ0882 n=11 Tax=Methanococcales RepID=Y8... 71 8e-11 UniRef50_C1ZEP1 16S RNA G1207 methylase RsmC n=1 Tax=Planctomyce... 70 9e-11 UniRef50_C0XSD5 Possible methyltransferase small n=1 Tax=Coryneb... 70 1e-10 UniRef50_Q28KG1 Methyltransferase small n=1 Tax=Jannaschia sp. C... 70 1e-10 UniRef50_A5IQ95 16S rRNA m(2)G 1207 methyltransferase n=53 Tax=S... 70 2e-10 UniRef50_Q0FA32 Methyltransferase, putative n=1 Tax=Rhodobactera... 70 2e-10 UniRef50_A4BC00 16S RNA G1207 methylase RsmC n=1 Tax=Reinekea bl... 70 2e-10 UniRef50_C1A9K7 rRNA methyltransferase n=1 Tax=Gemmatimonas aura... 70 2e-10 UniRef50_C5NY36 Methyltransferase small n=1 Tax=Gemella haemolys... 69 3e-10 UniRef50_A3K8H8 Methyltransferase, putative n=5 Tax=Rhodobactera... 69 3e-10 UniRef50_Q2W4E3 16S RNA G1207 methylase RsmC n=3 Tax=Magnetospir... 68 6e-10 UniRef50_B8I4M1 Methyltransferase small n=2 Tax=Bacteria RepID=B... 67 7e-10 UniRef50_A3JNU9 Methyltransferase, putative n=1 Tax=Rhodobactera... 67 9e-10 UniRef50_Q89AI2 Ribosomal RNA small subunit methyltransferase C ... 67 1e-09 UniRef50_Q3BNY2 Ribosomal RNA small subunit methyltransferase C ... 66 2e-09 UniRef50_B0UBH2 Methyltransferase small n=17 Tax=Alphaproteobact... 66 3e-09 UniRef50_C8NTY6 Methyltransferase small domain protein n=1 Tax=C... 65 4e-09 UniRef50_A6WWW0 Methyltransferase small n=21 Tax=Brucellaceae Re... 65 4e-09 UniRef50_Q1IXW7 rRNA (Guanine-N(2)-)-methyltransferase n=3 Tax=D... 65 5e-09 UniRef50_A8F736 Methyltransferase small n=1 Tax=Thermotoga letti... 65 6e-09 UniRef50_C2KPF6 Possible 16S rRNA methyltransferase n=4 Tax=Acti... 64 9e-09 UniRef50_A0YF73 16S ribosomal RNA m2G1207 methyltransferase n=1 ... 64 1e-08 UniRef50_A9KTA1 Methyltransferase small n=3 Tax=Firmicutes RepID... 63 2e-08 UniRef50_B5GW92 Methyltransferase n=1 Tax=Streptomyces clavulige... 62 2e-08 UniRef50_Q8TXG5 16S rRNA G1207 methylase n=1 Tax=Methanopyrus ka... 62 3e-08 UniRef50_C7LF42 Methyltransferase n=17 Tax=Brucella RepID=C7LF42... 62 3e-08 UniRef50_C1YW37 16S RNA G1207 methylase RsmC n=1 Tax=Nocardiopsi... 62 3e-08 UniRef50_C7NCQ1 Methyltransferase small n=5 Tax=Fusobacteriaceae... 62 3e-08 UniRef50_A8A8U2 Methyltransferase small n=1 Tax=Ignicoccus hospi... 62 4e-08 UniRef50_C0QWV8 Methyltransferase small domain protein n=2 Tax=B... 61 5e-08 UniRef50_B3PHG8 Putative ribosomal RNA small subunit methyltrans... 61 6e-08 UniRef50_C8WTY2 Methyltransferase small n=2 Tax=Alicyclobacillus... 61 7e-08 UniRef50_C8WEU0 Modification methylase, HemK family n=3 Tax=Zymo... 61 8e-08 UniRef50_C3RJV2 16S rRNA m(2)G 1207 methyltransferase n=4 Tax=Ba... 61 9e-08 UniRef50_C6ABL9 Ribosomal RNA small subunit methyltransferase C ... 60 9e-08 UniRef50_C5BI28 RNA methyltransferase, RsmC family n=1 Tax=Tered... 60 1e-07 UniRef50_D1A2Z3 Methyltransferase small n=2 Tax=Streptosporangin... 60 2e-07 UniRef50_C7RA23 Methyltransferase small n=3 Tax=Gammaproteobacte... 59 3e-07 UniRef50_B7CDV5 Putative uncharacterized protein n=1 Tax=Eubacte... 59 3e-07 UniRef50_B8I811 Methyltransferase small n=2 Tax=Clostridium RepI... 58 5e-07 UniRef50_D2RAI3 Methyltransferase small domain protein n=27 Tax=... 58 5e-07 UniRef50_Q045V2 16S RNA G1207 methylase RsmC n=22 Tax=Bacilli Re... 57 8e-07 UniRef50_Q1YVK1 RsmC protein n=1 Tax=gamma proteobacterium HTCC2... 57 8e-07 UniRef50_UPI0000E87AD9 modification methylase, HemK family prote... 57 8e-07 UniRef50_A1U204 Ribosomal RNA small subunit methyltransferase C ... 57 1e-06 UniRef50_Q057M1 Ribosomal RNA small subunit methyltransferase C ... 57 1e-06 UniRef50_B3E629 Protein-(Glutamine-N5) methyltransferase, releas... 56 2e-06 UniRef50_B9KCF8 Putative uncharacterized protein n=1 Tax=Campylo... 56 2e-06 UniRef50_C8P1I9 Methyltransferase domain protein n=1 Tax=Erysipe... 56 2e-06 UniRef50_A4BMP8 HemK protein n=1 Tax=Nitrococcus mobilis Nb-231 ... 56 3e-06 UniRef50_D1J7U8 Protoporphinogen oxydase HEMK n=1 Tax=Mycoplasma... 56 3e-06 UniRef50_B3RUJ8 Putative uncharacterized protein n=1 Tax=Trichop... 55 3e-06 UniRef50_C7R3H0 Methyltransferase small n=2 Tax=Micrococcineae R... 55 4e-06 UniRef50_Q9V1A1 Ribosomal RNA small subunit methyltransferase C ... 55 5e-06 UniRef50_Q47PA1 16S rRNA m(2)G 1207 methyltransferase n=1 Tax=Th... 54 6e-06 UniRef50_A6UF35 Methyltransferase small n=17 Tax=Rhizobiales Rep... 54 8e-06 UniRef50_B7I872 Ribosomal RNA small subunit methyltransferase C ... 54 9e-06 UniRef50_A6DL01 Putative uncharacterized protein n=1 Tax=Lentisp... 54 9e-06 UniRef50_Q1II29 Modification methylase, HemK family n=1 Tax=Cand... 53 1e-05 UniRef50_C0W0F2 Possible 16S rRNA methyltransferase n=1 Tax=Acti... 53 2e-05 UniRef50_A8TJ19 Predicted O-methyltransferase n=1 Tax=alpha prot... 52 3e-05 UniRef50_D0U5Y8 16S RNA G1207 methylase RsmC n=1 Tax=uncultured ... 52 3e-05 UniRef50_C1F2J0 Ribosomal protein L11 methyltransferase n=1 Tax=... 52 5e-05 UniRef50_C5RF40 Methyltransferase type 11 n=1 Tax=Clostridium ce... 52 5e-05 UniRef50_A9WGP8 Methyltransferase small n=5 Tax=Chloroflexaceae ... 51 6e-05 UniRef50_A5CW40 Protein methyltransferase HemK n=3 Tax=Gammaprot... 51 6e-05 UniRef50_Q6AE06 Putative uncharacterized protein n=1 Tax=Leifson... 51 7e-05 UniRef50_C8P9J5 Protein-(Glutamine-N5) methyltransferase n=1 Tax... 51 8e-05 UniRef50_A5EV99 Modification methylase, HemK family n=2 Tax=Card... 50 9e-05 UniRef50_B7KNT6 Methyltransferase small n=17 Tax=cellular organi... 50 1e-04 UniRef50_A3DMM0 Methyltransferase small n=1 Tax=Staphylothermus ... 50 1e-04 UniRef50_B9XCI6 Protein-(Glutamine-N5) methyltransferase, releas... 50 1e-04 UniRef50_Q6MRK8 HemK protein n=1 Tax=Bdellovibrio bacteriovorus ... 50 1e-04 UniRef50_D2PU49 Methyltransferase small n=2 Tax=Actinomycetales ... 50 2e-04 UniRef50_C6NTA1 Hypothetical adenine-specific methylase yfcB n=1... 50 2e-04 UniRef50_B1MVU0 16S RNA G1207 methylase RsmC n=11 Tax=Lactobacil... 49 2e-04 UniRef50_Q1GYE6 Modification methylase, HemK family n=1 Tax=Meth... 49 2e-04 UniRef50_D1R4W7 Putative uncharacterized protein n=1 Tax=Parachl... 49 3e-04 UniRef50_D2RP49 Protein-(Glutamine-N5) methyltransferase, releas... 49 3e-04 UniRef50_C4FY86 Putative uncharacterized protein n=1 Tax=Catonel... 49 3e-04 UniRef50_A6G0Z3 Modification methylase HemK n=1 Tax=Plesiocystis... 49 3e-04 UniRef50_Q1QXC5 Modification methylase, HemK family n=2 Tax=Gamm... 49 3e-04 UniRef50_Q15SR0 Modification methylase, HemK family n=8 Tax=cell... 49 4e-04 UniRef50_Q5WAJ4 Putative uncharacterized protein n=1 Tax=Bacillu... 49 4e-04 UniRef50_A9BIP2 Methyltransferase small n=11 Tax=Thermotogaceae ... 49 4e-04 UniRef50_C4V130 Putative uncharacterized protein n=2 Tax=Selenom... 48 5e-04 UniRef50_Q0AHU0 Modification methylase, HemK family protein n=5 ... 48 5e-04 UniRef50_Q93NC8 Protoporphyrinogen oxidase HemK n=3 Tax=Myxococc... 48 6e-04 UniRef50_Q1NJ01 Modification methylase HemK n=3 Tax=Deltaproteob... 48 7e-04 UniRef50_Q7UM12 Probable ribosomal RNA small subunit methyltrans... 48 7e-04 UniRef50_Q9ZJB6 Putative n=14 Tax=Helicobacter RepID=Q9ZJB6_HELPJ 48 7e-04 UniRef50_D0NHA4 Methylase subunit of polypeptide release factor,... 48 7e-04 UniRef50_Q0HYK7 Modification methylase, HemK family n=17 Tax=Alt... 48 7e-04 UniRef50_C6XAY7 Modification methylase, HemK family n=18 Tax=cel... 47 8e-04 UniRef50_B3WDK8 Protoporphyrinogen oxidase (Putative) n=9 Tax=La... 47 9e-04 UniRef50_B8H244 Peptide release factor-glutamine N5-methyltransf... 47 0.001 UniRef50_Q67TD4 Putative protoporphyrinogen oxidase n=1 Tax=Symb... 47 0.001 UniRef50_A5EWT8 Modification methylase, HemK family n=2 Tax=Card... 47 0.001 UniRef50_C6QJN8 Methyltransferase small n=1 Tax=Hyphomicrobium d... 47 0.001 UniRef50_A0P2X4 Methyltransferase n=2 Tax=Rhodobacteraceae RepID... 47 0.001 UniRef50_B8KG51 Protein-(Glutamine-N5) methyltransferase, riboso... 47 0.001 UniRef50_B6YSP9 Ribosomal RNA small subunit methyltransferase C ... 47 0.001 UniRef50_D1B2X8 Modification methylase, HemK family n=1 Tax=Sulf... 47 0.002 UniRef50_A2SU41 Methyltransferase type 11 n=4 Tax=Euryarchaeota ... 47 0.002 UniRef50_B3DUZ0 SAM-dependent methyltransferase n=1 Tax=Methylac... 46 0.002 UniRef50_A7RQR0 Predicted protein n=1 Tax=Nematostella vectensis... 46 0.002 UniRef50_A5GT68 Possible SAM-dependent methyltransferase n=2 Tax... 46 0.002 UniRef50_A1RUS7 Methyltransferase small n=1 Tax=Pyrobaculum isla... 46 0.002 UniRef50_C9MPV4 Methyltransferase n=2 Tax=Prevotella RepID=C9MPV... 46 0.002 UniRef50_A3EUN2 Modification methylase (HemK) n=2 Tax=Leptospiri... 46 0.002 UniRef50_A1SNI3 Methyltransferase small n=4 Tax=Actinomycetales ... 46 0.002 UniRef50_C6D5G9 Modification methylase, HemK family n=2 Tax=Paen... 46 0.003 UniRef50_Q2BHC0 Probable ribosomal RNA small subunit methyltrans... 46 0.003 UniRef50_B0TX38 Modification methylase, HemK family n=19 Tax=Fra... 46 0.003 UniRef50_Q1N3L9 Modification methylase, HemK family protein n=1 ... 46 0.003 UniRef50_C6HYV5 Modification methylase, HemK family n=1 Tax=Lept... 46 0.003 UniRef50_Q8NVG6 MW2041 protein n=64 Tax=Staphylococcus RepID=Q8N... 46 0.003 UniRef50_A7GYR0 UDP-MurNac-pentapeptide presynthetase n=7 Tax=Ca... 45 0.003 UniRef50_C0GGF2 Protein-(Glutamine-N5) methyltransferase, releas... 45 0.003 UniRef50_C5VLW9 Methyltransferase small domain protein n=1 Tax=P... 45 0.003 UniRef50_D0I834 Predicted O-methyltransferase n=4 Tax=Vibrionace... 45 0.003 UniRef50_C4PP34 Peptide release factor-glutamine N5-methyltransf... 45 0.003 UniRef50_C9M8H5 Methlytransferase, UbiE/COQ5 family n=1 Tax=Jonq... 45 0.003 UniRef50_B7G854 Predicted protein n=1 Tax=Phaeodactylum tricornu... 45 0.003 UniRef50_C7MDT2 Protein-(Glutamine-N5) methyltransferase, releas... 45 0.004 UniRef50_C5B815 Protein-(Glutamine-N5) methyltransferase, releas... 45 0.004 UniRef50_Q7S6C0 Predicted protein n=1 Tax=Neurospora crassa RepI... 45 0.004 UniRef50_D1YVR2 Putative methyltransferase n=1 Tax=Methanocella ... 45 0.004 UniRef50_C8X0Q8 Methyltransferase small n=2 Tax=Desulfovibrional... 45 0.004 UniRef50_Q7VR73 Methylase of polypeptide chain release factors n... 45 0.004 UniRef50_Q0FGB0 HemK n=1 Tax=Rhodobacterales bacterium HTCC2255 ... 45 0.005 UniRef50_Q03EK2 Methylase of polypeptide chain release factor n=... 45 0.005 UniRef50_C0WC25 Modification methylase n=1 Tax=Acidaminococcus s... 45 0.005 UniRef50_D2A1Q2 Putative uncharacterized protein GLEAN_07069-OG1... 45 0.005 UniRef50_C7PC96 Methyltransferase type 11 n=1 Tax=Chitinophaga p... 45 0.006 UniRef50_C3X2B7 Methyltransferase HemK MTase hemK n=2 Tax=Oxalob... 45 0.006 UniRef50_Q87DF7 Protein hemK homolog n=7 Tax=Xylella fastidiosa ... 45 0.006 UniRef50_C2KUL6 Polypeptide chain release factor methyltransfera... 45 0.006 UniRef50_B1MVN6 Methylase of polypeptide chain release factor n=... 44 0.009 UniRef50_D2RKC9 Methyltransferase type 11 n=3 Tax=Clostridiales ... 44 0.009 UniRef50_Q30QY4 Modification methylase HemK n=2 Tax=Campylobacte... 44 0.009 UniRef50_C1XUR2 Methylase involved in ubiquinone/menaquinone bio... 44 0.009 UniRef50_Q21JF1 16S rRNA m(2)G 1207 methyltransferase n=1 Tax=Sa... 44 0.010 UniRef50_Q2LWV0 Peptide release factor-glutamine N5-methyltransf... 44 0.010 UniRef50_B4WI79 Methyltransferase domain family n=1 Tax=Synechoc... 44 0.011 UniRef50_C3YPG1 Putative uncharacterized protein (Fragment) n=1 ... 44 0.012 UniRef50_UPI000185CC67 protein-(glutamine-N5) methyltransferase,... 44 0.013 UniRef50_A5L887 Predicted O-methyltransferase (Fragment) n=1 Tax... 44 0.013 UniRef50_Q164F9 Modification methylase, HemK family, putative n=... 44 0.014 UniRef50_UPI0000E0E154 peptide release factor-glutamine N5-methy... 44 0.014 UniRef50_B8CZ26 Modification methylase, HemK family n=1 Tax=Halo... 44 0.014 UniRef50_A5N3W1 Predicted methyltransferase n=2 Tax=Clostridium ... 43 0.015 >UniRef50_D2A808 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=D2A808_SHIF2 Length = 481 Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust. Identities = 374/378 (98%), Positives = 375/378 (99%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSC 60 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEI GPVLILNDAFGALSC Sbjct: 104 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEILGPVLILNDAFGALSC 163 Query: 61 ALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL 120 ALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL Sbjct: 164 ALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL 223 Query: 121 LEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE 180 LEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE Sbjct: 224 LEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE 283 Query: 181 PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG 240 P LADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG Sbjct: 284 PPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG 343 Query: 241 VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFN 300 VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDR EFMINNALSGVEPFRFN Sbjct: 344 VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRSEFMINNALSGVEPFRFN 403 Query: 301 AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTI 360 AVLCNPPFHQQHALTDNVAWEMFH+ARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTI Sbjct: 404 AVLCNPPFHQQHALTDNVAWEMFHYARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTI 463 Query: 361 ATNNKFVVLKAVKLGRRR 378 ATNNKFVVLKAVKLGRRR Sbjct: 464 ATNNKFVVLKAVKLGRRR 481 >UniRef50_B2VDD5 Ribosomal RNA large subunit methyltransferase G n=6 Tax=Enterobacteriaceae RepID=RLMG_ERWT9 Length = 375 Score = 512 bits (1318), Expect = e-144, Method: Compositional matrix adjust. Identities = 242/374 (64%), Positives = 299/374 (79%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSC 60 MS L+ R LTL RFP + +PLQAW+AADEYLL LD+ + GP LI ND FGAL+C Sbjct: 1 MSQLELSNRMLTLHRFPQMREESPLQAWDAADEYLLNHLDNLPVNGPTLIFNDTFGALAC 60 Query: 61 ALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL 120 ALA +SI DS++++ ATR+NL LN +DE V+ LDS A P P VLIKVPKTLAL Sbjct: 61 ALAGEGVWSISDSWLNQQATRQNLALNQLDEGDVRLLDSLAPLPGAPARVLIKVPKTLAL 120 Query: 121 LEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE 180 LE+QLRALR VVT +T+I+A KA++IHTSTL+LFEK+LGPTTT+LAWKKARLI TF + Sbjct: 121 LEKQLRALRAVVTPETQIVAAGKAKEIHTSTLQLFEKILGPTTTSLAWKKARLIYATFTQ 180 Query: 181 PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG 240 P+LA++ W L+GT W IHNHANVF+R GLDIGARFFMQHLP++++GEIVDLGCGNG Sbjct: 181 PELAESEVISRWPLDGTPWQIHNHANVFARGGLDIGARFFMQHLPDDIDGEIVDLGCGNG 240 Query: 241 VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFN 300 VIGL L +NP A+V F+DES MAVASSR+NVE N P+ L RCEF +NNAL+G R + Sbjct: 241 VIGLMALRQNPLAQVHFLDESYMAVASSRMNVELNCPDDLARCEFRVNNALAGYPSDRLH 300 Query: 301 AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTI 360 AVLCNPPFHQQ+A+TD++AW+MF ARRCL+ GEL IV NRHLDY+HK+KK+FGNCTT+ Sbjct: 301 AVLCNPPFHQQNAVTDHIAWQMFRDARRCLQYGGELRIVGNRHLDYYHKMKKLFGNCTTV 360 Query: 361 ATNNKFVVLKAVKL 374 AT+ KFV+L++VK+ Sbjct: 361 ATHQKFVILRSVKM 374 >UniRef50_A1JR10 Ribosomal RNA large subunit methyltransferase G n=143 Tax=Bacteria RepID=RLMG_YERE8 Length = 396 Score = 491 bits (1263), Expect = e-137, Method: Compositional matrix adjust. Identities = 234/375 (62%), Positives = 292/375 (77%), Gaps = 2/375 (0%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRG-PVLILNDAFGALS 59 MS + G +S L+RFP ++ N LQAWEAADEYLLQ +D +I G PVL+ ND FG L+ Sbjct: 1 MSQVLLGTQSFELERFPPQENSNTLQAWEAADEYLLQNIDLNQIDGRPVLVFNDQFGTLT 60 Query: 60 CALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLA 119 CAL ++P+S+ DSY+S+LAT NLRLN +DE V L S P+ P +V+IK+PK LA Sbjct: 61 CALHAYRPFSVSDSYMSQLATAHNLRLNHLDEDVVTLLSSMDALPEAPKLVVIKIPKALA 120 Query: 120 LLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFN 179 LLE QLRALR+VV DT IIAGAK+RD+H STL+LFEK+LGPT TTLAWKKARLI+C Sbjct: 121 LLEHQLRALRRVVAPDTVIIAGAKSRDVHNSTLQLFEKILGPTKTTLAWKKARLIHCEVA 180 Query: 180 EPQLAD-APQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCG 238 + LA+ AP+TV W L T++ IHNHANVFSR LDIGARFFM+ LP ++EG+I DLGCG Sbjct: 181 DIPLAEEAPETVDWPLANTEYVIHNHANVFSRNNLDIGARFFMEILPYDVEGKIADLGCG 240 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 NGV+GL L++NP A+++FVDES MAVASS LN+ N P+ L RCEFM+++ L+GVE Sbjct: 241 NGVVGLIALEQNPLAEMLFVDESYMAVASSELNITYNRPQDLSRCEFMVSHGLAGVERES 300 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCT 358 VLCNPPFHQQHA++D+VAW+MF A+RCLK+ GEL IV NRHLDYFHKLK++FGNC Sbjct: 301 LQLVLCNPPFHQQHAVSDHVAWQMFCDAKRCLKVGGELMIVGNRHLDYFHKLKRLFGNCE 360 Query: 359 TIATNNKFVVLKAVK 373 T+ +N KF+VLKAVK Sbjct: 361 TLDSNQKFMVLKAVK 375 >UniRef50_Q3IHQ6 Ribosomal RNA large subunit methyltransferase G n=7 Tax=Gammaproteobacteria RepID=RLMG_PSEHT Length = 382 Score = 355 bits (912), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 191/374 (51%), Positives = 246/374 (65%), Gaps = 11/374 (2%) Query: 7 GFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDD--TEIRGPVLILNDAFGALSCALAE 64 G ++ TL+RFP LQAW++ADEYL+ + + + R +LILND+FGALSC + Sbjct: 8 GDKTFTLERFPLDQKNRSLQAWDSADEYLIDYVSEHHPDCRS-LLILNDSFGALSCYFS- 65 Query: 65 HKPY---SIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALL 121 HK S+ DSYIS A NL N I + LDS + P+Q +VLIKVP+TL L Sbjct: 66 HKQLTVCSVNDSYISHQAAAYNLAENKIPAITFSQLDSLSALPEQVDLVLIKVPRTLGFL 125 Query: 122 EQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLI-NCTFNE 180 + QL L +V+ T +IA AK +D+H ST++ FE+ +G T T+LA KK+RLI + Sbjct: 126 QYQLSELSEVLAPGTPVIAAAKTKDVHNSTIKAFEQFIGETKTSLAVKKSRLIISHAQGG 185 Query: 181 PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPE-NLEGEIVDLGCGN 239 + AD P V+W LEGTD+TI NHANVFSR LDIGARFF +LPE N I+DLGCGN Sbjct: 186 YKAADFP--VNWPLEGTDFTISNHANVFSRDSLDIGARFFFNYLPETNKAKSIIDLGCGN 243 Query: 240 GVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRF 299 GV+GL L + P A + FVDES MAV S+RLNVE NM ++C F+ N+ LSG E Sbjct: 244 GVVGLMALSRCPNANITFVDESYMAVESARLNVELNMEAKYEQCSFVENDCLSGFERDSV 303 Query: 300 NAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTT 359 + VLCNPPFHQ A+TD++AW+MF A+ LK GEL I+ NRHLDY KL ++FGNC Sbjct: 304 DMVLCNPPFHQAQAVTDHIAWQMFKEAKDTLKEGGELRIIGNRHLDYHDKLNRMFGNCKL 363 Query: 360 IATNNKFVVLKAVK 373 + +N KFVVL A K Sbjct: 364 LGSNKKFVVLSATK 377 >UniRef50_A1SX22 Ribosomal RNA large subunit methyltransferase G n=3 Tax=Alteromonadales RepID=RLMG_PSYIN Length = 382 Score = 346 bits (888), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 167/376 (44%), Positives = 248/376 (65%), Gaps = 14/376 (3%) Query: 9 RSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGP------VLILNDAFGALSCAL 62 ++L L R P + LQAW++ADEYL+ + E++ +L++ND+FGAL+C L Sbjct: 10 QTLVLHRHPRIKN-ETLQAWDSADEYLINYFSENELQKQLNENEQILLVNDSFGALTCYL 68 Query: 63 AEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLE 122 + + DSY+S + + N++ N E ++ DS +P+ +VLIK+PKTL+ LE Sbjct: 69 QAFQRTVVSDSYLSINSIKLNMQRNRCPEENLLLQDSLQQFPENVKIVLIKIPKTLSYLE 128 Query: 123 QQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQ 182 + L+ L V+T +T ++A K IH STL+LFEK +G T T+LA KK+RLI F+ P Sbjct: 129 EMLQKLHAVITPETIVVAAGKVNMIHNSTLDLFEKYIGTTKTSLAKKKSRLI---FSLPI 185 Query: 183 LADAPQ---TVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGN 239 + + P+ ++W++E DW IHNHANVFSR LDIG RF M +LP+ ++VDLGCGN Sbjct: 186 IKEVPEKEIAITWEIEKLDWKIHNHANVFSRNHLDIGGRFLMDNLPKGDFSKVVDLGCGN 245 Query: 240 GVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE-ALDRCEFMINNALSGVEPFR 298 G+IG+ P+A++ F+DES M++ S+R+N++ N+PE + F++NN L G +P Sbjct: 246 GIIGMAASAAYPKAQITFIDESYMSIDSARINMQKNLPEEQAENARFVVNNGLVGFKPRS 305 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCT 358 ++ +LCNPPFHQQ +TD +AW MF+ A CL NGEL IV N HL+Y KL++IFGNC Sbjct: 306 YDLILCNPPFHQQQTITDQIAWSMFNDAHFCLVDNGELVIVGNHHLNYQDKLERIFGNCE 365 Query: 359 TIATNNKFVVLKAVKL 374 ++ N KFV+L+AVK+ Sbjct: 366 IVSQNKKFVILRAVKM 381 >UniRef50_Q15YR1 Ribosomal RNA large subunit methyltransferase G n=6 Tax=Gammaproteobacteria RepID=RLMG_PSEA6 Length = 384 Score = 326 bits (836), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 177/374 (47%), Positives = 244/374 (65%), Gaps = 9/374 (2%) Query: 9 RSLTLQRFPATDDVNPLQAWEAADEYLLQQL--DDTEIRG-PVLILNDAFGALSCALA-E 64 S L R+PA + QAW++ADEYL++ + + T++ G + I ND FGAL A Sbjct: 10 HSYELLRYPAENQHVSWQAWDSADEYLMEYVAQNITDLNGLNIHIYNDDFGALGVWFATN 69 Query: 65 HKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQ 124 + P I DS+++ A NL N + +V +S Q+ +VLIKVPKTLALLEQQ Sbjct: 70 NAPLWISDSFVAHKALALNLERNHLPIENVNVQNSLYKANQKADLVLIKVPKTLALLEQQ 129 Query: 125 LRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLA 184 L L+ VT +TRIIA KA I STL LFEK LG TTT+LA KK+RLI C ++ + + Sbjct: 130 LIDLQSSVTPETRIIAAGKANAIQKSTLALFEKHLGLTTTSLAKKKSRLIFCQYDGVKQS 189 Query: 185 DAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGL 244 +P WK + T + + N ANVFSR LDIGAR + HLP+ IVDLGCGNGV+GL Sbjct: 190 VSPYPTKWKTDNTQFIMSNLANVFSRQQLDIGARVLLAHLPDANHKCIVDLGCGNGVLGL 249 Query: 245 TLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL-----SGVEPFRF 299 +L K+P A V+FVDES MA+AS+++N+E NMP+ LD+C+F+++N L SG Sbjct: 250 HVLHKSPGAHVIFVDESFMAIASAKMNIEQNMPDKLDQCKFIVSNCLDECLSSGENEATV 309 Query: 300 NAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTT 359 + VLCNPPFHQQ+ +TD++A +MF ++R LK GEL +V NRHLDY +K++FG+ Sbjct: 310 DIVLCNPPFHQQNTITDHIALQMFKDSKRILKHAGELRVVGNRHLDYPQTIKRLFGHYKV 369 Query: 360 IATNNKFVVLKAVK 373 +A++ KF +L A+K Sbjct: 370 LASDRKFSILSAIK 383 >UniRef50_Q488Q3 Ribosomal RNA large subunit methyltransferase G n=3 Tax=Alteromonadales RepID=RLMG_COLP3 Length = 392 Score = 326 bits (835), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 168/382 (43%), Positives = 242/382 (63%), Gaps = 17/382 (4%) Query: 9 RSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEI---RGPVLILNDAFGALS---CAL 62 ++L L RFP + LQAW++ADEYL+ + D + + V I NDAFGAL+ C Sbjct: 10 KNLFLSRFPVSQVNRSLQAWDSADEYLINHVHDQNLINAQTKVAIFNDAFGALAVNFCQS 69 Query: 63 AEHKP--YSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL 120 P SI DSYIS N+ N +D+S L+S P V+L K+PK+ +L Sbjct: 70 TSENPEVISINDSYISSEGASYNIEQNSLDDSHFTQLNSLDSLPNNIDVILYKIPKSKSL 129 Query: 121 LEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE 180 L +QL ++K V + IA +A++IH+STL++FEK LG T T+LA KKARL+ C F+ Sbjct: 130 LIEQLIQIKKSVNENCIFIAADRAKEIHSSTLKVFEKHLGTTKTSLAVKKARLVFCQFDN 189 Query: 181 PQLADAPQTVSWK--------LEGTDWTIHNHANVFSRTGLDIGARFFMQHLPE-NLEGE 231 Q+ +P W L + TI NHANV++R LDIGAR+F+++LP Sbjct: 190 KQVHQSPFPTVWSIPHKSTNDLPSRELTISNHANVYAREKLDIGARYFIENLPTVAANST 249 Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 ++DLGCGNGVIGLT+L P+A V F+DES MA++S++ N+ TN+P+ +++CEF +N++L Sbjct: 250 VIDLGCGNGVIGLTVLANQPEAHVQFIDESTMAISSAKQNIMTNLPDVIEQCEFTLNDSL 309 Query: 292 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLK 351 + +E + +LCNPPFHQ A TD++AW+MF + R LK GEL I+ N+ L Y KL+ Sbjct: 310 TDIEGGSVDLILCNPPFHQNTATTDHIAWQMFKDSHRVLKKGGELRIIGNQKLAYHIKLQ 369 Query: 352 KIFGNCTTIATNNKFVVLKAVK 373 ++FGN T IA+N+KFV A+K Sbjct: 370 RLFGNETLIASNDKFVTQSAIK 391 >UniRef50_UPI0000E0E42F Putative ribosomal RNA small subunit methyltransferase D (rRNA (guanine-N(2)-)-methyltransferase) (16S rRNA m2G966 n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0E42F Length = 388 Score = 313 bits (801), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 174/377 (46%), Positives = 235/377 (62%), Gaps = 12/377 (3%) Query: 12 TLQRFPATDDVNPLQAWEAADEYLLQ--QLDDTEIRGPVL-----ILNDAFGALSCALAE 64 TL R+PA LQAW+A DEY++ Q + T++ + ILND FGAL+CA Sbjct: 13 TLVRYPAEHQHKSLQAWDAVDEYIISYVQANYTDLLDNITPQRMAILNDDFGALTCAFQA 72 Query: 65 HKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQ 124 KP I DS++++L R NL+ N +D +S++F+ ST Q +VL+++PK LALL Q Sbjct: 73 CKPVHISDSFVAQLGARHNLQQNDLDSASIEFIASTDKLSQTFDIVLMQLPKNLALLTYQ 132 Query: 125 LRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLA 184 L LR DT IIAG K + + +LF +LG T+LA KK+RL+ + N L Sbjct: 133 LHQLRDCTHPDTIIIAGGKVPVVTKNVQQLFNTILGDCHTSLAAKKSRLVIGSVNNA-LT 191 Query: 185 DAPQTV--SWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE-IVDLGCGNGV 241 P T +W++ + + NVFSR LDIGARF MQHLP +EGE +VDLGCGNGV Sbjct: 192 PPPLTPWNTWEITKPVLQLSHLPNVFSRLHLDIGARFLMQHLPL-IEGEHVVDLGCGNGV 250 Query: 242 IGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNA 301 IG T+L P AKV FVDES MA+ S++ NV+ N PE +C+F++ N LS V+ + Sbjct: 251 IGCTVLADAPNAKVTFVDESYMAIESAKRNVQDNFPEQYAQCDFVVANCLSQVDLEHVDL 310 Query: 302 VLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIA 361 VLCNPPFHQQ+A+TD++AW+MF A++ L+ GEL I+ NRHL Y + LKK +G T IA Sbjct: 311 VLCNPPFHQQNAVTDHIAWQMFKDAKQVLRHGGELRIIGNRHLPYGNMLKKRYGGFTVIA 370 Query: 362 TNNKFVVLKAVKLGRRR 378 TN KF +L K R Sbjct: 371 TNAKFSILSTYKSDASR 387 >UniRef50_Q6LTZ3 Ribosomal RNA large subunit methyltransferase G n=2 Tax=Photobacterium profundum RepID=RLMG_PHOPR Length = 374 Score = 308 bits (789), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 166/369 (44%), Positives = 234/369 (63%), Gaps = 8/369 (2%) Query: 9 RSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEI--RGPVLILNDAFGALSCALAEHK 66 R+L L RFP + LQAW+AADEYL+ D E+ + P+LILND+FGALSC AE Sbjct: 10 RTLKLNRFPIRK-IETLQAWDAADEYLINHTHDMELDPQRPILILNDSFGALSCWFAERA 68 Query: 67 PYS-IGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQL 125 + + DS++++ NL N + SV +D A+ P+ P +VLIK+PK LL QL Sbjct: 69 NVTTVTDSFVAKQGCIANLTANQL--PSVNIIDCLAELPKNPQLVLIKLPKNNRLLTWQL 126 Query: 126 RALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLAD 185 + L ++ D R+I AK +DIHTSTL+L +K LG T T+LA KKARL+ N Sbjct: 127 QQLCHLLPEDCRVIGAAKVKDIHTSTLKLCDKYLGETKTSLAVKKARLVFIKPNASLAKP 186 Query: 186 APQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLE-GEIVDLGCGNGVIGL 244 P+ +W + + NHANVFS LDIGAR + H+P++ + +I+DLGCGNGVIG+ Sbjct: 187 MPEAKAWDVPEHGIRLSNHANVFSGESLDIGARLLLNHIPQDFKYKDIIDLGCGNGVIGI 246 Query: 245 TLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLC 304 +NPQAK+ VDES MA AS N + N+ EA ++ ++ + L+ +E + VLC Sbjct: 247 KAARRNPQAKITCVDESFMAAASCTENAKQNL-EAPEQLTAIVTDCLADIEHSSADLVLC 305 Query: 305 NPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNN 364 NPPFHQQ +TD++AW+MF A++ L+ GEL ++ NR L Y KLK++FGN IA N+ Sbjct: 306 NPPFHQQTTITDHIAWQMFCDAKQVLRPKGELIVIGNRQLGYDDKLKRLFGNVEIIAQND 365 Query: 365 KFVVLKAVK 373 KF+V ++VK Sbjct: 366 KFIVYQSVK 374 >UniRef50_B1VMX8 Ribosomal RNA large subunit methyltransferase G n=10 Tax=Actinomycetales RepID=RLMG_STRGG Length = 384 Score = 303 bits (777), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 171/380 (45%), Positives = 233/380 (61%), Gaps = 22/380 (5%) Query: 10 SLTLQRFPATDDVNPLQAWEAADEYLLQQLDD-----TEIRGPVLILNDAFGALSCALAE 64 + L RFP +P +AW+AAD+YLLQQL D ++ G V ++ D +GAL+ ALA Sbjct: 10 AFELARFP-EHPRDPFRAWDAADDYLLQQLTDPGTGPVDLSGTVAVVGDRWGALATALAA 68 Query: 65 HKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQ 124 H+P I DSY++ AT NL NGIDE +V+ L S P + V+L++VPK+LA LE Q Sbjct: 69 HRPVQISDSYLARRATLANLARNGIDEDAVRLLSSRDTPPDRIDVLLVRVPKSLAFLEDQ 128 Query: 125 LRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLA 184 L L V S T +I ++IHTSTL++FE+++GPT T+LA +KARLI T +P L Sbjct: 129 LHRLAPAVHSGTVVIGTGMVKEIHTSTLKIFERIIGPTRTSLAVRKARLIFST-PDPAL- 186 Query: 185 DAPQTVS-----WKLEG-----TDWTIHNHANVFSRTGLDIGARFFMQHLPENLEG-EIV 233 P+T+S ++L T NHA +F LDIG RFF++HLP +V Sbjct: 187 --PRTLSPWPYRYELPADVGPVAGLTAVNHAGIFCAERLDIGTRFFLKHLPTRSGAVRVV 244 Query: 234 DLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG 293 DLGCGNGV+GL+ NP A + FVDES AVAS+ P A + +F++ + L+ Sbjct: 245 DLGCGNGVLGLSAAVANPDAHLTFVDESYGAVASAEETFRAGAP-AGAKADFLVGDGLAD 303 Query: 294 VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKI 353 ++P + VL NPPFH A TD A MF A+ L+ GEL++V NRHL Y L++I Sbjct: 304 LDPGSVDLVLNNPPFHSHLATTDATARTMFAGAKTALRRGGELWVVGNRHLSYHTHLRRI 363 Query: 354 FGNCTTIATNNKFVVLKAVK 373 FGNCTT+A + KFVVL+AVK Sbjct: 364 FGNCTTVAGDPKFVVLRAVK 383 >UniRef50_D1XLW4 rRNA (Guanine-N(2)-)-methyltransferase n=5 Tax=Streptomyces RepID=D1XLW4_9ACTO Length = 386 Score = 303 bits (776), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 166/388 (42%), Positives = 237/388 (61%), Gaps = 18/388 (4%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTE-------IRGPVLILND 53 M+ L L R+P D + L+AW+AADEYLL++L+ E G V+++ D Sbjct: 1 MNRLTTSQGVFELTRYP-EDPRDRLRAWDAADEYLLRRLEGPEDGEPAPEAGGTVVVVGD 59 Query: 54 AFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIK 113 +GAL+ ALA ++P I DSY+++ ATR+NL NG D +V+ L + P++ +L++ Sbjct: 60 RWGALATALAGYRPIQITDSYLAQQATRDNLARNGADPDAVRMLSARDTPPERIDTLLLR 119 Query: 114 VPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARL 173 VPK+LA LE QL L V + T +I ++IHTSTL+LFE++LGPT T+LA KKARL Sbjct: 120 VPKSLAFLEDQLHRLAPAVHAGTVVIGTGMVKEIHTSTLQLFERILGPTRTSLAVKKARL 179 Query: 174 INCTFNEPQLADAPQTVSWKLE-------GTDWTIHNHANVFSRTGLDIGARFFMQHLP- 225 I+CT +P L AP ++ E + T+ NHA +F LDIG RFF++HLP Sbjct: 180 IHCT-PDPGLPMAPSPWPYRYELPEDIGVMSGRTVTNHAGIFCADRLDIGTRFFLKHLPR 238 Query: 226 ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEF 285 + +VDLGCGNGV+G P++ V F+DES AVAS+ N P + F Sbjct: 239 RSGPDRVVDLGCGNGVVGTAAALAAPESCVTFIDESYQAVASAEETFRANAPAGAE-ARF 297 Query: 286 MINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLD 345 ++ +A++ V + VL NPPFH A+TD A MF AR L+ GEL++V NRHL Sbjct: 298 VVGDAMADVPEQSVDLVLSNPPFHSHQAVTDATARTMFRGARAALRPGGELWVVGNRHLG 357 Query: 346 YFHKLKKIFGNCTTIATNNKFVVLKAVK 373 + +L++IFGNCTT+A + KFVVL+AV+ Sbjct: 358 HHTQLRRIFGNCTTVAGDPKFVVLRAVR 385 >UniRef50_B4RZB4 Ribosomal RNA large subunit methyltransferase G n=2 Tax=Alteromonas macleodii RepID=RLMG_ALTMD Length = 410 Score = 301 bits (771), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 171/401 (42%), Positives = 239/401 (59%), Gaps = 37/401 (9%) Query: 9 RSLTLQRFPATDDVNPLQAWEAADEYLLQQLD-----------DTEIRGPVLILNDAFGA 57 R L+L R+P LQAW++ADE +++ L+ D E ++I ND FGA Sbjct: 10 RQLSLIRYPEKHQHVSLQAWDSADELVIEHLESLLSENELSIGDNESTPSLMIFNDDFGA 69 Query: 58 LSCALAEHKPYSIGDSYISELATRENLRLNGIDESS------------VKFLDS--TADY 103 L C + PY + DSYIS + ENL+ N + +S VK L S +A + Sbjct: 70 LGCWFSHLAPYWVSDSYISLRSLHENLKANSLIRASEGSCTQELKTSPVKTLTSVESASF 129 Query: 104 PQQ--PGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGP 161 P VV+IKVP+ LALLEQQL L+ +T +T++IA K + I S L LFEK +GP Sbjct: 130 KPACAPAVVVIKVPRALALLEQQLIDLQAYITPETQVIATGKVKAITKSALNLFEKYIGP 189 Query: 162 TTTTLAWKKARLINCTFNEP-QLADAPQTVSWKLE---GTDWTIHNHANVFSRTGLDIGA 217 TTT+LA KK+RLI T + + A +P W+ + G I N AN F+R LDIGA Sbjct: 190 TTTSLAKKKSRLIFATPRDSLKQATSPYPTRWQCKSTMGAALIIDNLANTFARQSLDIGA 249 Query: 218 RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP 277 R ++H+ + +VDLGCGNGV+G+ L P AKV+FVDES MA+ S+RLNV N P Sbjct: 250 RIMLEHMTVSANDVVVDLGCGNGVLGVNALSLAPDAKVIFVDESYMALESARLNVLNNFP 309 Query: 278 EALDRCEFMINNALSGV-----EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKI 332 + +++CEF+ +N L + +P +LCNPPFHQQ+A+TD++AW+MF +R L Sbjct: 310 DKIEQCEFVASNCLETLLNRENKP-AVTKILCNPPFHQQNAITDHIAWQMFTDSRDLLVK 368 Query: 333 NGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 +G L +V NRHL+Y KLKK+FG +A++ KFV+L K Sbjct: 369 SGHLVVVGNRHLEYHIKLKKLFGGAKVLASDKKFVILGTAK 409 >UniRef50_A0YBC4 Putative ribosomal RNA small subunit methyltransferase D (RRNA (Guanine-N(2)-)-methyltransferase) (16S rRNA m2G966) n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBC4_9GAMM Length = 390 Score = 287 bits (735), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 170/391 (43%), Positives = 239/391 (61%), Gaps = 23/391 (5%) Query: 1 MSHLDNGFRSLTLQRFPA----TDDVNPLQAWEAADEYLLQQLDDTEI---RGPVLILND 53 M L F S+ L R + T N L+AW+AADE LL L D E+ G +LI+ND Sbjct: 1 MDILSTAFGSIRLVRSSSALHNTKAANNLRAWDAADELLLAYLADNELPKNTGRLLIIND 60 Query: 54 AFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESS---VKFLDSTADYPQQPGVV 110 FGALSC+L+++ P S DS +S A + N N + S ++ L ST+D+ +V Sbjct: 61 NFGALSCSLSQYNPCSWSDSSVSLAAAKYNYAANDLGNSPANPLETLASTSDFVGNADLV 120 Query: 111 LIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKK 170 LIK+PKTLALLE QL +LRK T T II + + S L+LFEK++G T+ +LA KK Sbjct: 121 LIKIPKTLALLEHQLMSLRKNTTEKTIIIGAGMVKYLEKSYLQLFEKIIGGTSVSLAKKK 180 Query: 171 ARLINCTFNE-PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFF---MQHLPE 226 ARLI T ++ Q A +P + ++ D + N+ANVFSR LDIG+RFF M+ LP Sbjct: 181 ARLIFSTVDQTKQPAPSPYPIKVAIDEFDLSTINYANVFSREKLDIGSRFFIERMKSLPA 240 Query: 227 NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM-----PEALD 281 I+DLGCGNG++G+ P AK+ F+DES MA+AS++ ++E + PE Sbjct: 241 --ASSIIDLGCGNGILGIVAKRLYPTAKITFIDESYMAIASAKASLEHYLGGIITPE--H 296 Query: 282 RCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 341 RC+F+++N+L VLCNPPFHQ + + D +A +MF ++R L G + IV N Sbjct: 297 RCDFVVSNSLDQANGEPVELVLCNPPFHQNNTIGDEIASKMFIQSKRILINGGRIRIVGN 356 Query: 342 RHLDYFHKLKKIFGNCTTIATNNKFVVLKAV 372 RHL+Y LK++FGNC TIA+N KFV+L+A+ Sbjct: 357 RHLNYHIALKRLFGNCRTIASNKKFVILEAI 387 >UniRef50_Q1K1R5 RRNA (Guanine-N(2)-)-methyltransferase n=2 Tax=Proteobacteria RepID=Q1K1R5_DESAC Length = 375 Score = 284 bits (727), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 154/367 (41%), Positives = 225/367 (61%), Gaps = 11/367 (2%) Query: 13 LQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGP---VLILNDAFGALSCALAEHKPYS 69 L R+P ++ +PL+AW+AADE++L +L D + P +LI+ND+FGALSC L ++P Sbjct: 13 LYRYPVRNN-DPLRAWDAADEFILNELHDQSLPQPSQRLLIVNDSFGALSCCLHPYEPTL 71 Query: 70 IGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALR 129 + DS ++ NL+ N I + + F DS P +VLIKVPK+LALLE QL LR Sbjct: 72 VSDSCLTYHGLLHNLKSNRIAQDCITFFDSLTTPPGHYDIVLIKVPKSLALLEDQLVRLR 131 Query: 130 KVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQT 189 V+ ++ II A + + S +ELFEK+LGPT T+LA KKARLI +F+ + Sbjct: 132 PVIKPESVIIGAAMVKHLSASAIELFEKILGPTHTSLARKKARLIFSSFDAERTLTPLPP 191 Query: 190 VSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQH---LPENLEGEIVDLGCGNGVIGLTL 246 + +L + H VFS LD+G+R ++ LP I+DLGCGNG++G+T Sbjct: 192 ANLRLPEFQLNLLQHPGVFSMNRLDLGSRLVLEQSHLLPP--AKVIIDLGCGNGILGITA 249 Query: 247 LDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNP 306 + P+A + FVDES AV S+R+N E R F + + L+G++ + ++ NP Sbjct: 250 ARQQPEAHLTFVDESYRAVDSARINFEAIFGHRPAR--FEVIDCLNGIDRDSADLIINNP 307 Query: 307 PFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKF 366 PFHQQ + D VAW+MF AR+ L +G+L++V NRHL Y KLK++FGNC +A+ +KF Sbjct: 308 PFHQQQVVGDQVAWQMFRQARQVLGRSGQLWVVGNRHLGYHTKLKRLFGNCKLVASTHKF 367 Query: 367 VVLKAVK 373 V+LKA K Sbjct: 368 VLLKATK 374 >UniRef50_A4VI28 Ribosomal RNA large subunit methyltransferase G n=12 Tax=Bacteria RepID=RLMG_PSEU5 Length = 375 Score = 280 bits (715), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 162/378 (42%), Positives = 227/378 (60%), Gaps = 9/378 (2%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGP--VLILNDAFGAL 58 M LD + SL L R P + PLQA++AADEYLL L + VLILND+FGAL Sbjct: 1 MPILDTPYASLDLIRQPEQPN-EPLQAFDAADEYLLATLHGQGLPAATRVLILNDSFGAL 59 Query: 59 SCALAEH-KPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQP-GVVLIKVPK 116 +CALA H + S GDS+++ LA ++NL N + V+F+ ++ + Q P VLI+VPK Sbjct: 60 ACALAAHVEVTSSGDSHLAHLALQKNLARNDLPADRVRFVPAS-EAAQGPFDRVLIRVPK 118 Query: 117 TLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINC 176 TL+LLE+QL L + ++IA A + + + +L E+ +GP +LA KKARL++ Sbjct: 119 TLSLLEEQLIRLHDQLAPGAQVIAAAMIKHLPRAAGDLLEQYIGPVQASLAVKKARLLSA 178 Query: 177 TFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEG-EIVDL 235 T + +P ++L+ + NHAN+F R GLDIG R F+ HLP+ L + DL Sbjct: 179 TPVDKPAPQSPYPTRYQLDQPKLELLNHANLFCREGLDIGTRAFLPHLPKALGAIRVADL 238 Query: 236 GCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE 295 GCGNGV+G+ NPQA++ VDES MAV S+R N + + E + + L+ Sbjct: 239 GCGNGVLGIVYALGNPQAELTLVDESYMAVQSARENWQVILGE--RPADIRAGDGLAEQP 296 Query: 296 PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG 355 P + VLCNPPFHQQ + D +AW MF A+ L GEL+IV NRHL Y KLK++FG Sbjct: 297 PGSLDLVLCNPPFHQQQVVGDFLAWRMFTQAKAALTKGGELWIVGNRHLGYHLKLKRLFG 356 Query: 356 NCTTIATNNKFVVLKAVK 373 N +A KFVVL+++K Sbjct: 357 NAEQVAATPKFVVLRSIK 374 >UniRef50_A5F5X3 Ribosomal RNA large subunit methyltransferase G n=63 Tax=Gammaproteobacteria RepID=RLMG_VIBC3 Length = 376 Score = 276 bits (706), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 154/366 (42%), Positives = 224/366 (61%), Gaps = 11/366 (3%) Query: 14 QRFPATDDVNPLQAWEAADEYLLQQLDDTEI--RGPVLILNDAFGALSCALAE-HKPYSI 70 RFP ++ LQAW+A DEYL+Q ++ + ++I+ND FG LSC ++ HK + Sbjct: 15 HRFPKRNN-ETLQAWDAGDEYLIQHVEQLALPESSHIVIINDHFGTLSCWFSQKHKVSMM 73 Query: 71 GDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRK 130 DSYI+ AT+ NL+ N V+ L + P VVL+++PK+ L L LRK Sbjct: 74 SDSYIAHQATQANLQQN--QRPPVQLLTTLDPVPNDASVVLLQLPKSNRHLVWILSQLRK 131 Query: 131 VVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTV 190 ++ + IIA KA++IHTSTL LFEK LGPTTT+LAWKK RL+ + + Sbjct: 132 ALSPNIPIIAVNKAKEIHTSTLNLFEKHLGPTTTSLAWKKHRLVFSSATVNPANEVNPEC 191 Query: 191 SWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE-IVDLGCGNGVIGLTLLDK 249 W +E T+ N NV+S LD+G+RF ++HLP + E +DLGCGNGV+ + L Sbjct: 192 GWSIEPYAITLTNLPNVYSGESLDLGSRFILEHLPADPTLEDFIDLGCGNGVLSVRLGQL 251 Query: 250 NPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFH 309 NPQAK+ VDES MA+AS++ N+ N+ + C + NN L G + ++CNPPFH Sbjct: 252 NPQAKITCVDESFMAIASAQKNLHDNLGKRDIHC--IANNCLDGFPAHSSSMIVCNPPFH 309 Query: 310 QQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG--NCTTIATNNKFV 367 QQ +TD++AW+MF ++ LK G+L+++ NRHL Y KL ++FG + IA N+KFV Sbjct: 310 QQQTITDHIAWQMFCDSKHVLKKGGKLWVIGNRHLGYDVKLARLFGKSHVRVIANNSKFV 369 Query: 368 VLKAVK 373 +L+A+K Sbjct: 370 ILQAIK 375 >UniRef50_B0TR07 Ribosomal RNA large subunit methyltransferase G n=21 Tax=Shewanella RepID=RLMG_SHEHH Length = 421 Score = 271 bits (693), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 155/377 (41%), Positives = 231/377 (61%), Gaps = 12/377 (3%) Query: 11 LTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRG-PVLILNDAFGALSCALAEHKP-Y 68 L L R+P+ + N LQAW+AADE+L++ L DTE I+ND FGAL+ L P + Sbjct: 12 LELLRYPSRQESN-LQAWDAADEHLIKHLIDTEQTNINTAIINDNFGALTAGLLSIDPSW 70 Query: 69 SIG---DSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQL 125 ++ D+ S L T +NL N + ++ +++S + PQ +VL+K+PK L QL Sbjct: 71 ALTLETDAKTSLLGTTQNLSRNQLPTDTLTWVNSCDELPQGFELVLMKLPKNLNYFSHQL 130 Query: 126 RALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLAD 185 L V+ + TR++ GAKA+ I+ S LE EK LG + +L WKK R+I C ++ ++ Sbjct: 131 NRLSHVLPAGTRVLIGAKAKSINKSLLETIEKNLGAASASLTWKKTRVITC-ISDGKVRP 189 Query: 186 APQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLT 245 P+ +W + I N +NVF+ LDIGAR + ++P+ IVDLGCGNG++GL Sbjct: 190 LPKATTWSVPEFKLQITNLSNVFAANKLDIGARIMLDNMPKGDFKSIVDLGCGNGILGLH 249 Query: 246 LLDKNPQAKVVFVDESPMAVASSR----LNVETNMPEALDRCEFMINNALSGV-EPFRFN 300 P+A + F+D+S MAVAS+R LN N ++ F ++ L+ + E FR + Sbjct: 250 AKQVFPEAYIHFIDDSEMAVASARENWALNKLDNPALVGEQATFGWDDCLTHMSEGFRPD 309 Query: 301 AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTI 360 +LCNPPFHQ A+TD++AW+MF A R LK G L++V NRHL Y KL++IF NCTT+ Sbjct: 310 LILCNPPFHQGEAITDHIAWQMFLDAFRRLKNGGILHVVGNRHLAYHVKLQRIFKNCTTV 369 Query: 361 ATNNKFVVLKAVKLGRR 377 A+N KFV+L+A K+ ++ Sbjct: 370 ASNGKFVILQAQKISKK 386 >UniRef50_Q4ZNG3 Ribosomal RNA large subunit methyltransferase G n=13 Tax=Pseudomonadaceae RepID=RLMG_PSEU2 Length = 374 Score = 265 bits (677), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 159/377 (42%), Positives = 211/377 (55%), Gaps = 7/377 (1%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGP--VLILNDAFGAL 58 M L + F L L R P D PLQA++AADEYLL + + P VL+LND+FGAL Sbjct: 1 MPLLISPFAELDLIRQPEQQD-EPLQAFDAADEYLLNHVAQAGLSLPSRVLVLNDSFGAL 59 Query: 59 SCALAEHKPY-SIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKT 117 + +LA H S DS+++ A +NL NG+ +V + ++ VLI+VPKT Sbjct: 60 AASLAPHATVISSTDSFLAAQALEKNLARNGMSYDAVPHIPASEALQGPFDWVLIRVPKT 119 Query: 118 LALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCT 177 LALLE+QL L+ + R+IA A + + S +L E+ +GP +LA KKARL+ T Sbjct: 120 LALLEEQLIRLQGQLAPGARVIAAAMVKHLPRSAGDLLEEYVGPVQASLAVKKARLLFAT 179 Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL-EGEIVDLG 236 ++ +P ++LE + NHANVF R GLDIG R F+ HLP+NL + DLG Sbjct: 180 PQPMEVRTSPYPTRYRLEEPAIELLNHANVFCRDGLDIGTRAFLPHLPKNLGTARVADLG 239 Query: 237 CGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 296 CGNGV+ + NPQA VDES MAV S+ N + + R + L EP Sbjct: 240 CGNGVLAIASALDNPQAHYTLVDESFMAVKSAAENWRATLGDRDVRVR--AGDGLEMQEP 297 Query: 297 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGN 356 + VLCNPPFHQQ + D +AW MF AR L G LYIV NRHL Y KL ++F Sbjct: 298 DSLDVVLCNPPFHQQQVVGDFLAWRMFLQARAALVTGGALYIVGNRHLGYHTKLSRLFRG 357 Query: 357 CTTIATNNKFVVLKAVK 373 +A KFV+LKA K Sbjct: 358 VEQVAATPKFVILKARK 374 >UniRef50_B5JW57 Ribosomal ribonucleate guanine-2-methyltransferase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW57_9GAMM Length = 388 Score = 253 bits (647), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 160/396 (40%), Positives = 219/396 (55%), Gaps = 35/396 (8%) Query: 4 LDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPV--LILNDAFGALSCA 61 + F LQR P LQAW+AADEYLLQ + RG V L+LND FGAL+ Sbjct: 1 MQTPFGHFELQRLPLRRR-ETLQAWDAADEYLLQH-HAAQRRGDVSPLLLNDNFGALAIN 58 Query: 62 LAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGV--VLIKVPKTLA 119 LA +P S GDS + AT NL+LN + E SV + ST P GV VLI+VPK LA Sbjct: 59 LARQQPVSWGDSATAHAATAYNLKLNALSEKSVLCVPST-QVPALQGVTDVLIRVPKNLA 117 Query: 120 LLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFN 179 L EQQLR LR ++ + ++ A + + L E++LGP + A KKARLI+C Sbjct: 118 LFEQQLRQLRPLLAAQAQVTAAGMVKHLPHGAKPLMEQILGPCQLSRAEKKARLIHCVAE 177 Query: 180 E--PQLADAPQTVSWKLEGTDWTIH--NHANVFSRTGLDIGARFFMQ---HLPENLEGEI 232 + + P + E ++W I N NVF+ LDIGARFF++ HLP I Sbjct: 178 QGGQHIEALPDRLC---EVSEWDIQLSNQVNVFAHDKLDIGARFFLEQFHHLPA--AQRI 232 Query: 233 VDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 292 VDLGCG+GV+G+ + P A V F+DES MAVAS++ N + N+ + D F+ ++ L Sbjct: 233 VDLGCGSGVLGIAAQKQQPHAAVTFIDESYMAVASAKKNYQINIGDG-DSVRFIADHQLP 291 Query: 293 GVEPFRF---------------NAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELY 337 F + +LCNPPFHQ + +++++A M + + L GEL+ Sbjct: 292 ACRGSAFKPTCRPEGRPTPTLPDLILCNPPFHQGNTISEHIARGMIQQSHQALAQGGELW 351 Query: 338 IVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 +V NRHL Y LK++FG TIA N KF+V +AVK Sbjct: 352 LVFNRHLSYPSLLKRLFGGFETIAQNKKFIVTRAVK 387 >UniRef50_A0L9S5 Ribosomal RNA large subunit methyltransferase G n=1 Tax=Magnetococcus sp. MC-1 RepID=RLMG_MAGSM Length = 369 Score = 231 bits (589), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 154/378 (40%), Positives = 217/378 (57%), Gaps = 16/378 (4%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLL--QQLDDTEIRGPVLILNDAFGAL 58 M HL+ +LTL+RFP PLQAW+AAD L L D EI LILND FGAL Sbjct: 1 MQHLNIHGHTLTLRRFPHKPGC-PLQAWDAADALALTNHALPDGEI----LILNDHFGAL 55 Query: 59 SCALA--EHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPK 116 +C LA E + DSY++ A +NL+LN I E+ + + A P P +LIK+P+ Sbjct: 56 ACGLAYPERTLEWVNDSYMAHQALAQNLQLNRI-ETPLHRTPALAASPTNPVGILIKLPR 114 Query: 117 TLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINC 176 L LL QL L + T ++ A+ +D+ ++ +L ++L + A KKARLI Sbjct: 115 MLQLLSSQLDWLNLHLPKGTPVVIAARQKDMPSTLPDLTRRLLDDVHPSRAEKKARLIFG 174 Query: 177 TFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLG 236 + Q A + +W D + ++ NVF R LD+GAR +Q+L + ++VDLG Sbjct: 175 QLSGRQSGQA-EITAWHCAELDCLLSHYPNVFGRQKLDLGARVLLQNL-GTIPDQVVDLG 232 Query: 237 CGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE-TNMPEALDRCEFMINNALSGVE 295 CGNGV+ + L +NP + V+ VDES A S ++N+E PE + + ++LS +E Sbjct: 233 CGNGVLSIAALQRNPNSHVLAVDESWQATRSCQINLERVRTPEHF---KVVWGHSLSFIE 289 Query: 296 PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG 355 + + VLCNPPFHQ LTD++AW MF A R LK G L +V NRHL Y KL K+FG Sbjct: 290 GMQADLVLCNPPFHQHQTLTDDIAWCMFKDAHRVLKPGGRLRMVGNRHLGYHAKLHKLFG 349 Query: 356 NCTTIATNNKFVVLKAVK 373 +C +IA KFVVL++VK Sbjct: 350 HCRSIAATPKFVVLESVK 367 >UniRef50_Q0VPK2 Ribosomal RNA large subunit methyltransferase G n=2 Tax=Alcanivorax RepID=RLMG_ALCBS Length = 390 Score = 207 bits (526), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 142/385 (36%), Positives = 205/385 (53%), Gaps = 23/385 (5%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLL-------QQLDDTEIRGPVLILND 53 M+ + + L LQR+P + LQAW+ AD YLL Q L + + L+LND Sbjct: 1 MTPFHHPWGELCLQRWPRRRN-ETLQAWDNADLYLLNTLAERGQALGNGDNAPKTLVLND 59 Query: 54 AFGALSCALAEHKPY-----SIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQ-P 107 GAL AL + S GDSY + A R N NG+D + + D P+Q P Sbjct: 60 QQGALCLALQQAAASALDIESSGDSYTAAAAARANAVDNGLDPNLL--FCWPLDAPKQSP 117 Query: 108 GVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLA 167 V+++VPK++ALL+ QL+ L + I + + + L ++ LG Sbjct: 118 DQVIMRVPKSIALLQWQLQWLSGHLPKGVPIWLAGMDKHLPRQLVPLMQRYLGNGRAEYG 177 Query: 168 WKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPEN 227 WKKARL + LAD +++ W + HA VF++ LDIGARFF+ HLPE Sbjct: 178 WKKARLFSAQAPGRVLADTDYPC--RVDALQWRLTVHAGVFAQQQLDIGARFFLDHLPEA 235 Query: 228 LE--GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEF 285 L ++ DLGCGNGVIG+ +L NP A+V F DES +A+ S+R NV +A F Sbjct: 236 LHTGAKVADLGCGNGVIGMAVLKANPAARVTFCDESWLALESARDNVSRYFSDA--ESHF 293 Query: 286 MINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLD 345 + + L+G+E RF+ +L NPPFH + + D+VA +F+ A L GEL ++ NRHL Sbjct: 294 HLGDGLAGLEQ-RFDCILLNPPFHDGYVVGDHVARRLFNQAATALVPGGELRVIGNRHLG 352 Query: 346 YFHKLKKIFGNCTTIATNNKFVVLK 370 Y L + F + T +A+N KFVV + Sbjct: 353 YHKVLARRFTSVTVLASNAKFVVWR 377 >UniRef50_Q1N4Z1 RRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Bermanella marisrubri RepID=Q1N4Z1_9GAMM Length = 366 Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 125/382 (32%), Positives = 189/382 (49%), Gaps = 29/382 (7%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSC 60 M L+ R+L L R P T PL+ W+AADEY++ + D + I+ND FGAL C Sbjct: 1 MDTLNIAGRTLKLVR-PGTPAKLPLRPWDAADEYIINEAQDL---AKITIINDGFGALGC 56 Query: 61 ALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLA- 119 L++H + I DS + A NL NGI + L V IK+P+ + Sbjct: 57 VLSDHIDHWISDSACASDALNSNLNRNGI-TAQFHILSPMQMQNANGEVAAIKLPRNASY 115 Query: 120 ---LLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINC 176 L+EQ ++ R I A L F + G KKA + Sbjct: 116 NHYLIEQ-------LIHQGYREIWFAGMMKHLPKNLLSFLQQFGNVQRLPFVKKATIFKL 168 Query: 177 TFNEPQLADAPQTVSWKLEG-TDWTIHNHANVFSRTGLDIGARFFMQHLP------ENLE 229 + P + + + G T WT HANVF R LD+GA FF+QH + + Sbjct: 169 AVDTPNVKSSGYPKQLNIHGQTLWT---HANVFGRDKLDLGAEFFLQHFKSIQSQCQKAQ 225 Query: 230 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINN 289 ++ DL G+G++GL + P +++ F DES MA+ S +L+ + N ++ F + Sbjct: 226 PKVADLCAGSGILGLKFKELAPDSELHFYDESAMAIESCQLSWQANQTDS--NVAFHWQD 283 Query: 290 ALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK 349 L EP F+ +LCNPPFH+ + ++D++A +F A++ L G+LYIVANRHL Y Sbjct: 284 GLENAEPV-FDLILCNPPFHENNTVSDHIARRLFKQAKQALAEQGQLYIVANRHLPYQSV 342 Query: 350 LKKIFGNCTTIATNNKFVVLKA 371 L+++F + +A N KFV+L A Sbjct: 343 LQRMFKHVNQVAQNKKFVILHA 364 >UniRef50_A4BHH5 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BHH5_9GAMM Length = 367 Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 116/365 (31%), Positives = 190/365 (52%), Gaps = 18/365 (4%) Query: 10 SLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYS 69 S LQR P + LQAW AADE L++ R P+L+LNDAFGAL+ AL + Sbjct: 12 SYRLQRVPQD---HRLQAWNAADELFLERYKPD--RSPILLLNDAFGALAVALHDQPVQW 66 Query: 70 IGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALR 129 S +++ A + N + N + + ++ L S A + V L +PK++ QL Sbjct: 67 WHASAMAQEALQLNCQANRVRQPNI--LTSLATETEAHNVAL-HIPKSINYFAWQLEQCC 123 Query: 130 KVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQT 189 + D I A + I +E+ ++ + A KKAR+I ++P+ Sbjct: 124 RHSAPDRTIYALGMVKHISAGHIEVMNRLFEEVSPGRAEKKARVIE--LSKPKHIQISTQ 181 Query: 190 VSWKLEGTDWTIHNHANVFSRTGLDIGARFFM---QHLPENLEGEIVDLGCGNGVIGLTL 246 ++++ + T+ + F+ D GA F+ +HLP +++DLGCGNG++GL Sbjct: 182 RQYRVQNPNLTLRHLPGCFAENRPDPGALVFLSYYEHLPA--ADKVLDLGCGNGILGLAY 239 Query: 247 LDKNPQAKVVFVDESPMAVASSRLNVETN-MPEALDRCEFMINNALSGVEPFRFNAVLCN 305 +P A+VV +DE+ A+ S+ N N +P NAL+ + +F+ +LCN Sbjct: 240 FKAHPDAQVVLIDENAQALKSAEQNWTLNDLPGNAITVHSNGLNALAADQ--QFDLILCN 297 Query: 306 PPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNK 365 PPFHQ + LT+ +A ++F A++ L +GE ++VANRHL Y +LKK F + ++ + K Sbjct: 298 PPFHQDNTLTEGIAQKLFDDAKKHLSKDGEFWVVANRHLSYATELKKRFKDVHLVSKHPK 357 Query: 366 FVVLK 370 FV+ K Sbjct: 358 FVIWK 362 >UniRef50_B7RVB2 Ribosomal protein L11 methyltransferase, putative n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RVB2_9GAMM Length = 371 Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 122/361 (33%), Positives = 185/361 (51%), Gaps = 12/361 (3%) Query: 13 LQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGD 72 LQR+P+ + PL+AW AAD LL+ + + L++ND GALS L+ ++ D Sbjct: 18 LQRYPSRNR-EPLRAWCAADVLLLEATKASSVN--TLVVNDDHGALSLPLSASAMWT--D 72 Query: 73 SYISELATRENLRLNGIDESSVKFLDSTADYPQQP-GVVLIKVPKTLALLEQQLRALRKV 131 S ++ A +N LN D S K + ST P+ P +++++PK L E QL L V Sbjct: 73 SALAAEALAQNSSLN--DLPSPKVIWST-QLPRLPVDRIVLRIPKQLPYFEFQLAQLATV 129 Query: 132 VTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVS 191 + + T+++ + + T L E+ LGP +KARL + T +P S Sbjct: 130 MPAGTQLLCAGMDKHLSPHTAALMEQQLGPVERHRGRQKARLFSATLPGEAKGPSPSEAS 189 Query: 192 WKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLE-GEIVDLGCGNGVIGLTLLDKN 250 + + D + ANVFSR LD G+R ++ L + DL CGNG++G+ L N Sbjct: 190 YHCDLIDQKLTGLANVFSREKLDPGSRLMLETLRRAEPVASVADLACGNGLLGIAALHFN 249 Query: 251 PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ 310 + V+F DES MA+AS+R N F + + L G+E +F+ ++CNPPFH Sbjct: 250 LASSVLFADESAMAIASARANAARAARHD-SEAAFHLGDGLQGIE-RKFDLIVCNPPFHL 307 Query: 311 QHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLK 370 H + D + A L G L +VANRHLDY L+++F + +A N KFVV + Sbjct: 308 GHTVDDFAGRRLLQQAAHSLLPGGSLLLVANRHLDYAPSLQRLFRHAEVMAQNAKFVVWR 367 Query: 371 A 371 A Sbjct: 368 A 368 >UniRef50_A1U203 Methyltransferase small n=2 Tax=Marinobacter RepID=A1U203_MARAV Length = 379 Score = 161 bits (407), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 113/355 (31%), Positives = 173/355 (48%), Gaps = 12/355 (3%) Query: 25 LQAWEAADEYLLQQLDDTEIRG-PVLILNDAFGALSCALAEHKPYSIGDSYISELATREN 83 L+AW+AADE LL + G VL+++D FGAL+ LA ++P ++ DS + N Sbjct: 24 LRAWDAADELLLSAAEPYLADGLRVLVVDDQFGALTLGLACYQPQTVADSATLAHSLLTN 83 Query: 84 LRLNGIDESSVKFLDSTADYPQQP-GVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGA 142 LN L+ P P +VL+++P+ L LR L V+ D RI+AG Sbjct: 84 ASLNPALPDCPAVLNWRRP-PSGPFDLVLLRIPRQAGYLAWLLRWLNSVLAEDGRILAGG 142 Query: 143 KARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLAD-APQTVSWKLEGTDWTI 201 + + ++++F + A KKAR++ C L + Q + + G + Sbjct: 143 MIKHLPDRSVDVFASAVVTEQVLPARKKARVVVCRGGSATLPEWQEQWRGYPVAGLPGPV 202 Query: 202 HNHANVFSRTGLDIGARFFMQHLPENLE-----GEIVDLGCGNGVIGLTLLDKNPQAKVV 256 VF+R LDIG R + +P+ + G I+DL CGNGV+GL+ L P A+V Sbjct: 203 EALPAVFAREKLDIGTRELLPLIPQAVSRVPPAGRILDLACGNGVLGLSALAGRPGAEVH 262 Query: 257 FVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTD 316 F D S A+AS N+ E D + ++ P + +L NPPFH+ + D Sbjct: 263 FSDVSSQAIASVEHNLSRY--EGGDCVHLWHQDGIADDLP-DYQLILLNPPFHEGGVVGD 319 Query: 317 NVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 ++A +F A R L G + +V NRHL Y LK+ F + A + KFVV +A Sbjct: 320 HIALRLFRDAARHLAPGGRVLMVGNRHLGYHRSLKQYFSSVEQRAASPKFVVFEA 374 >UniRef50_A3J9J3 Nucleotide methyltransferase, putative n=1 Tax=Marinobacter sp. ELB17 RepID=A3J9J3_9ALTE Length = 419 Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 112/404 (27%), Positives = 181/404 (44%), Gaps = 60/404 (14%) Query: 21 DVNPLQAWEAADEYLLQQ---------LDDTEIRGP----VLILNDAFGALSCALAEHKP 67 +V LQAW++ADE LLQQ L D + G VL+++D FGAL+ L + +P Sbjct: 25 NVASLQAWDSADELLLQQATHWMEDGWLADKQPAGKQHPRVLVVDDNFGALTLGLWDLQP 84 Query: 68 YSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQP-------------------- 107 ++ DS NL LN +S++ + P Sbjct: 85 ITLADSAALGRVLAHNLALNPPLQSNLSDQPVPLSWCDDPVLAQETATNSSHSANRLNGP 144 Query: 108 -GVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTL 166 +V++++P+ L LR + ++ + ++AG + + ++++F + + Sbjct: 145 FDLVVMRIPRYGDYLAWLLRRVNTLLADNGVLLAGGMIKHLPDRSVDVFAQAVVTEKVCP 204 Query: 167 AWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHAN------------VFSRTGLD 214 A KKAR++ C +L SW +++ A VF+R LD Sbjct: 205 ARKKARVVICRKGSAEL------TSWTSAWQGYSLAAGAETAKALSVSALPAVFARDKLD 258 Query: 215 IGARFFMQHLPENLEG-----EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSR 269 IG R + H+ + +++DL CGNGV+GL L N ++ F D S AV S+ Sbjct: 259 IGTRALLPHVTQAAAALAPGAQVLDLACGNGVLGLAALAANSHLELTFSDVSSQAVISAA 318 Query: 270 LNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRC 329 N P++ + A G E F+ +L NPPFH+ + D++A +F ARR Sbjct: 319 TNAAREFPQSAFSFRHADSIAADGGE---FDLILLNPPFHEGGVVGDHIALALFAAARRH 375 Query: 330 LKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 L+ G L +V NRHL Y L + F + N KFVVL+A + Sbjct: 376 LRPGGRLLLVGNRHLGYHRSLGRFFPQVRQLDANPKFVVLEASR 419 >UniRef50_A9WVF5 16S rRNA m(2)G 966 methyltransferase n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WVF5_RENSM Length = 386 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 102/385 (26%), Positives = 185/385 (48%), Gaps = 25/385 (6%) Query: 8 FRSLTLQRFPATDDVNPLQAWEAADEYLL----QQLDDTEIRGP-VLILNDAFGALSCAL 62 F L+R P + N L AW+A+D LL + LD + + V++LND++G ++ L Sbjct: 6 FDPALLRRRPDIESSN-LFAWDASDALLLDLATEHLDSSTTQAADVVVLNDSYGGVALGL 64 Query: 63 AEHKPYSIGDSYISELATRENLRLN----GIDE--SSVKFLD-STADYPQQPGVVLIKVP 115 + + L + LRLN G+ E + + F+D A +VL+K+P Sbjct: 65 TIRSGLNGIRVHQDLLTGEQALRLNAERLGLGELLTQLPFVDDGGAQLLGGAKLVLLKLP 124 Query: 116 KTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLIN 175 ++LA LE+ +A+ + + +IA + + + + + T LA +K+R + Sbjct: 125 RSLAELEEMAQAIARFADPEVIVIAVGRIKHMSLAMNRVLAASFEEVTAGLARQKSRPLF 184 Query: 176 CTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQH-------LPENL 228 + A + + + H VF+ LDIG RF ++ +PE+ Sbjct: 185 ASLPREAAVGADFPRGSVIADLNLQVRAHGEVFAGASLDIGTRFLIEQVRAGAIAIPES- 243 Query: 229 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN 288 G +DLGCG G++ + + +V+ D S ++AS++ N + + + + Sbjct: 244 -GTALDLGCGTGLLAVEMASAQSGLRVIATDRSAASIASAQATALAN---GVPQVGVLQD 299 Query: 289 NALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFH 348 +A + + +L NPPFH A+ VA ++FH A R L+ G+L+ V NRHL + Sbjct: 300 DAAVSLPEGSVDLILLNPPFHSGAAVHSAVATKLFHAASRLLRPGGQLFTVYNRHLTHAK 359 Query: 349 KLKKIFGNCTTIATNNKFVVLKAVK 373 L+K+ G + +A N+KFV+L++ + Sbjct: 360 VLEKVVGRSSVLAQNSKFVILRSTR 384 >UniRef50_D1BFL3 16S rRNA m(2)G 1207 methyltransferase n=7 Tax=Bacteria RepID=D1BFL3_SANKS Length = 394 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 110/354 (31%), Positives = 159/354 (44%), Gaps = 37/354 (10%) Query: 48 VLILNDAFGALS----CALAEHKPYSIG-------------DSYISELATRENLRLNGID 90 V++L+D GAL L E P S G D SE + + L G Sbjct: 46 VVVLDDRSGALVLGVLAGLEERAPESSGPTPVPAPRVRSAQDRVTSERSLQAALADAGAC 105 Query: 91 ESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTS 150 + D + VVL+++PK+L LE+ +A+ + D + AGA + + + Sbjct: 106 DRVTVHAGLGPDLLRDARVVLLRLPKSLDALEETAQAVARWAPDDVVVYAGAPVKHMTRT 165 Query: 151 TLELFEKVLGPTTTTLAWKKAR-------LINCTFNEPQLADAPQTVSWKLEGTDWTIHN 203 E+ + G TL KAR L EP P+T +L+ D T+ Sbjct: 166 MNEVLLRSFGEVHATLGRHKARALVARRPLDAARTTEPTF---PRTA--RLDELDLTVVA 220 Query: 204 HANVFSRTGLDIGARFFM----QHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVD 259 H VF+ T LDIG R + Q PE + VDLGCG GV+ L P +VV D Sbjct: 221 HGGVFAGTRLDIGTRTLLGVLDQAAPEARDA--VDLGCGTGVLATVLARSRPGLRVVASD 278 Query: 260 ESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVA 319 +S AVAS+ N DR + ++ALS + + V+CNPPFH+ L + A Sbjct: 279 QSAAAVASTLATAGAN--GVGDRVTGLRDDALSTLPDASADLVVCNPPFHEGTTLETDAA 336 Query: 320 WEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 MF A R L+ GEL+ V N HL + L ++ G T + N KF V ++V+ Sbjct: 337 HRMFAAAARVLRPGGELWTVYNSHLRHKSALGRVVGPTTMVLQNPKFTVTRSVR 390 >UniRef50_B8H9N3 Methyltransferase small n=10 Tax=Actinomycetales RepID=B8H9N3_ARTCA Length = 418 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 110/378 (29%), Positives = 167/378 (44%), Gaps = 21/378 (5%) Query: 13 LQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRG-PVLILNDAFGALSC-ALAEHKPYSI 70 L+R P + N LQAW+A D LL+ T G V ++ D +GAL+ AL P ++ Sbjct: 41 LRRHPDVEAPN-LQAWDATDRLLLETAAATVRPGSAVTVIGDRYGALTLGALDLLAPGTL 99 Query: 71 ---GDSYISELATRENLRL-NGIDESSVKFLDSTADYPQQP---------GVVLIKVPKT 117 D E A ++N R E+ ++ Q P VL+++PKT Sbjct: 100 RVHQDLVTGERALQQNARAWQATQETDDAGSGRVPEFRQLPLGAELLTGADTVLLQLPKT 159 Query: 118 LALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCT 177 LA L++ + + I+AG + + + + E+ LA +K+R+I + Sbjct: 160 LAELDEVAATVARHAAPGALILAGGRVKHMSLGMNGVLERYFDSVQPQLARQKSRVIVAS 219 Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE-IVDLG 236 ++ L+ + H VF+ LDIG RF + LP VDLG Sbjct: 220 HSKAGQPPTSFPAVVHLDELGLDVAAHGAVFAGPKLDIGTRFLLTFLPAMKPARHAVDLG 279 Query: 237 CGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALD-RCEFMINNALSGVE 295 CG G++ P+AKV D+S AVAS+ N LD R + ++ALS + Sbjct: 280 CGTGILAAMYARTYPEAKVTATDQSAAAVASALATARAN---GLDGRISALQDDALSTMA 336 Query: 296 PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG 355 + VL NPPFH + ++ A R L GEL+ V NRHL Y L++ G Sbjct: 337 DASADLVLLNPPFHVGAGVHAGAGLKLIEAAGRVLAPGGELWTVYNRHLPYLPALERAVG 396 Query: 356 NCTTIATNNKFVVLKAVK 373 T N KF V ++V+ Sbjct: 397 PTTVEGNNPKFTVARSVR 414 >UniRef50_C7R392 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R392_JONDD Length = 394 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 81/273 (29%), Positives = 125/273 (45%), Gaps = 12/273 (4%) Query: 110 VLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWK 169 VL+++PKT+ L+ + + R +A + + + T + T +L Sbjct: 122 VLMRLPKTVDTLDDFAHTIAAHASPRMRFLAAGRVKYMTTRMNDALAASFAAVTASLGRY 181 Query: 170 KARLINCTFNEPQLADA--PQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPEN 227 K+R ++ + L A PQ + I + VFS T LD+G RF + LP Sbjct: 182 KSRALHASMPHTPLPPARFPQQATLA----TIPIAAYGGVFSGTSLDVGTRFLLSTLPTA 237 Query: 228 L----EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRC 283 L IVD+GCGNG++G+ + +P V D S AV S+R V+ N DR Sbjct: 238 LTDLQSARIVDVGCGNGLLGVWIARHHPHVSVTMTDVSAQAVRSARATVDLN--NVGDRV 295 Query: 284 EFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 343 +ALS + + V+CNPPFH A+T A +F R L G + V N Sbjct: 296 SVRWMDALSQLPDHSADLVVCNPPFHDGTAVTTTPAHRIFADVGRVLTPGGRMLTVFNTP 355 Query: 344 LDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGR 376 L Y L+++ G +AT+ KF + ++V GR Sbjct: 356 LAYAPTLRRLVGPTRVLATHAKFTITESVTPGR 388 >UniRef50_A3WQL8 16S RNA G1207 methylase RsmC n=1 Tax=Idiomarina baltica OS145 RepID=A3WQL8_9GAMM Length = 339 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 62/185 (33%), Positives = 100/185 (54%), Gaps = 7/185 (3%) Query: 190 VSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDK 249 V W+ G + + VFS+ LD G ++HLPE ++G+++D CG GVIG L+ + Sbjct: 161 VDWR--GVSASFSAYPGVFSQGRLDAGTALLLEHLPETIQGKVLDFACGCGVIG-ALVAQ 217 Query: 250 NPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFH 309 ++ D SPMA+AS+++N E + ++ + LS + FN +L NPPFH Sbjct: 218 KFAVELTASDVSPMAIASTQMNWEKLGIQG----RLILADGLSSLSDGSFNWILSNPPFH 273 Query: 310 QQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVL 369 ++ + A + L NG L IVANR L + ++++FG+C +A N KF VL Sbjct: 274 TGLRTDYDIGEQFIKQAFKKLAPNGTLVIVANRFLPWPEHMRQVFGHCDELADNGKFKVL 333 Query: 370 KAVKL 374 + +L Sbjct: 334 LSKRL 338 >UniRef50_D1YE28 Methyltransferase small domain protein n=3 Tax=Propionibacterium acnes RepID=D1YE28_PROAC Length = 334 Score = 110 bits (275), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 83/298 (27%), Positives = 138/298 (46%), Gaps = 24/298 (8%) Query: 82 ENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAG 141 E +RLN + V +D P VV + +P +L L++ L L +++ D I+AG Sbjct: 54 EAIRLNPLTAGDV------SDSP----VVWMSLPASLDELDELLGTLWRILGPDAHIVAG 103 Query: 142 AKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGT--DW 199 + + + S ++ + +L +KAR+++ F+ P+ A T +W T Sbjct: 104 GRIKHMSRSMNDVAARWFNEVHASLGVRKARVLH--FSSPRQRPA-ITGTWPRTNTVNGL 160 Query: 200 TIHNHANVFSRTGLDIGARFFMQHL---PENLEGEIVDLGCGNGVIGLTLLDKNPQAKVV 256 TI H VF G+D G + +L ++ + VDLGCGNGVI L PQA + Sbjct: 161 TIRAHGGVFHTAGVDAGTSLLLDYLDAIAADVHSDAVDLGCGNGVISAHLARLLPQATIH 220 Query: 257 FVDESPMAVASSRLNVETNMPEALDR-CEFMINNALSGVEPFRFNAVLCNPPFHQQHALT 315 D S AV S+RL + N + C+ +++ V + V+ NPPFH+ A Sbjct: 221 ATDVSWQAVDSTRLTAQANQLNIVTHWCDGLVD-----VPHESVDVVVTNPPFHRGTAQD 275 Query: 316 DNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 M A R L+ G L+ V N HL + +++ G + N ++ V++ V+ Sbjct: 276 HAPTLAMLADAARVLRPGGTLWCVYNNHLPWASHVRRTIGPTRQVVRNRRYTVIRTVR 333 >UniRef50_A7MUT5 Ribosomal RNA small subunit methyltransferase C n=54 Tax=Vibrionales RepID=RSMC_VIBHB Length = 341 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 86/286 (30%), Positives = 130/286 (45%), Gaps = 21/286 (7%) Query: 97 LDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFE 156 S D Q +VL+ PK A E L L + +T I+ + R S ++F Sbjct: 67 FGSEFDIETQADMVLLYWPKAKAEAEYLLAMLMTKLGINTEIVVVGENRSGIKSIEKMF- 125 Query: 157 KVLGPTTTTLAWKKARLINCTF------NEPQ---LADAPQTVSWKLEGTDWTIHNHANV 207 K GP + AR C+F NEP+ AD ++ L T+ + V Sbjct: 126 KEYGPVKK---YDSAR--RCSFYWGTCLNEPKPFNQADWFKSYEITLGEQSLTVKSLPGV 180 Query: 208 FSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVAS 267 FS D+G+R ++ LP+ L G+++D GCG GV+G + NP+ + D + A+ S Sbjct: 181 FSHGEFDLGSRLLLETLPK-LSGKVLDFGCGAGVLGAFMAKANPEIAIEMCDINAYAITS 239 Query: 268 SRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHAR 327 S+ +E N L F + + +RF ++ NPPFH N A + A Sbjct: 240 SQATLEAN---GLSGRVFASDIYSDTAKDYRF--IVSNPPFHSGLDTNYNAAETLLGQAP 294 Query: 328 RCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 + + NGE+ IVAN L Y ++K F NC T+ NKF + A K Sbjct: 295 KYMTANGEMIIVANSFLQYPPIIEKAFNNCETLNKTNKFSIYYAKK 340 >UniRef50_D1BX92 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BX92_XYLCX Length = 440 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 110/396 (27%), Positives = 175/396 (44%), Gaps = 57/396 (14%) Query: 20 DDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALS---CALAEHKPYSIGDSYIS 76 D+ PL A A LDD V+++ D FGAL+ AL S D+ S Sbjct: 63 DEARPLLARPEAG----SALDD------VVVIGDRFGALAVGLAALGRRGVRSHTDAVTS 112 Query: 77 ELATRENLRLNGIDESSVKFLDSTADYPQ----QPGVV------LIKVPKTLALLEQQLR 126 E A ENLR L T D Q +PG+V L+++P++LA L++ Sbjct: 113 ERAVTENLRT----AHRGPLLGQTFDLRQHDSLEPGLVRGARLVLLQLPRSLAELQEVAE 168 Query: 127 ALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADA 186 + + D ++AG + + + + ++ + TLA K+R++ P+ A Sbjct: 169 LVAREAADDVVLLAGGRVKHMTHAMNDVLARSFEDVRATLARGKSRVLVARRPRPEARTA 228 Query: 187 PQT--VSWKL---------------------EGTDWTIHNHANVFSRTGLDIGARFFMQ- 222 P + V+ L G + H VF+ LD+G R ++ Sbjct: 229 PPSYPVTATLHDAELLAAARLSLDSRADDGGSGGGIAVVAHGGVFAGAALDLGTRALLRT 288 Query: 223 --HLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEAL 280 P+ + VDLGCG G++ L ++P +VV D S A AS+R N Sbjct: 289 ADRWPD--AADAVDLGCGTGLLATVLALRDPHVRVVATDRSAAAAASARATARAN--GVG 344 Query: 281 DRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 340 +R + ++A G EP + VLCNPPFH + A++ + A MF A R L+ GEL+ V Sbjct: 345 ERVVVLRDDAGQGEEPASADLVLCNPPFHDRAAVSTDAAHRMFAAAARVLRPGGELWCVY 404 Query: 341 NRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGR 376 N L Y L++ G ++ + +F V ++V+ R Sbjct: 405 NSVLRYRPALERTVGPTEQVSRDPRFTVTRSVRTAR 440 >UniRef50_D0SZB9 16S RNA methylase RsmC n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SZB9_ACILW Length = 344 Score = 107 bits (267), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 85/273 (31%), Positives = 126/273 (46%), Gaps = 23/273 (8%) Query: 111 LIKVPKTLALLEQQLRALRKVVTSDTRI-IAGAKARDIHTSTLELFEKVLGPTTTTLAWK 169 +I VPK+ LL L + + + I + G K I + K L P TL Sbjct: 74 VIFVPKSKELLNYLLHNVAAQLKPGSSIFLVGEKKGGIERAA-----KQLQPFGKTLKLD 128 Query: 170 KAR-------LINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQ 222 AR ++ T + LAD Q + D I VFS+ LD+G + Sbjct: 129 SARHCQLWQLVLEHTVEKKALADWAQRYTVSTPNGDLNICALPGVFSQNRLDVGTATLLP 188 Query: 223 HLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN--MPEAL 280 +L + G+I D GCG GVI L NP+ ++ +D A+AS+++ E N +PE + Sbjct: 189 YLSQVTSGKIADFGCGAGVISAYLAKLNPKNRIFAMDVDAFALASTQMTFEENQLIPEQI 248 Query: 281 DRCEFMINNALSGVE--PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYI 338 + A+ G+E P +A++ NPPFH + + +RR LK GEL+I Sbjct: 249 EI------KAVKGIEDAPLFLHAIVSNPPFHMGIETDYTASETLCKISRRHLKSGGELWI 302 Query: 339 VANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 VANR L+Y +++ FG CT A F VL A Sbjct: 303 VANRFLNYPTLIEQNFGRCTVKADQQGFKVLFA 335 >UniRef50_A1SZ19 Ribosomal RNA small subunit methyltransferase C n=2 Tax=Psychromonas RepID=RSMC_PSYIN Length = 349 Score = 107 bits (267), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 67/186 (36%), Positives = 100/186 (53%), Gaps = 7/186 (3%) Query: 188 QTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLL 247 +T + T+ I + VFS LD G+ +Q+LP+ + G ++D GCG GVI +L Sbjct: 167 KTYPLNINNTELQICSLPGVFSYGELDKGSELLLQNLPDKMSGRVLDFGCGAGVIACYVL 226 Query: 248 DKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPP 307 K+PQ V VD + A+AS++L++++N E +N S ++ ++N +L NPP Sbjct: 227 KKHPQLSVDLVDINAFALASAKLSLQSNQLEG----NVFPSNVFSDIKE-KYNILLSNPP 281 Query: 308 FHQQHALTDNVAWEMF-HHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKF 366 FH TD A E F + + LK G+L IVANR L+Y L K F N +NKF Sbjct: 282 FHSGKN-TDYTAAETFINQSTNHLKSKGKLSIVANRFLNYEGLLFKAFSNVKIDQESNKF 340 Query: 367 VVLKAV 372 VL + Sbjct: 341 KVLSCI 346 >UniRef50_D2T448 Ribosomal RNA small subunit methyltransferase n=1 Tax=Erwinia pyrifoliae DSM 12163 RepID=D2T448_ERWPY Length = 447 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 5/176 (2%) Query: 198 DWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVF 257 + T+ VFSR GLDIG++ + L +++G+++D+GCG GV+ L +P+ ++ Sbjct: 271 ELTVKTLPGVFSRDGLDIGSQLLLSTLKPHMKGKVLDMGCGAGVLSAMLASFSPKVRLTL 330 Query: 258 VDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDN 317 D + A+ASS+ + N E + +N S + RF+ ++ NPPFH + + Sbjct: 331 TDVNAAAIASSKATLTANQLEG----DVFASNVYSDISG-RFDMIISNPPFHDGVQTSLD 385 Query: 318 VAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 A + A L GEL IVAN L Y L + FG+ + N +F V +AVK Sbjct: 386 AAQTLIRGAVSHLNTGGELRIVANAFLPYPQVLDEAFGSHEVLLQNGRFKVYRAVK 441 >UniRef50_C5CBM4 16S RNA G1207 methylase RsmC n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5CBM4_MICLC Length = 401 Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 95/343 (27%), Positives = 148/343 (43%), Gaps = 26/343 (7%) Query: 44 IRGPVLILNDAFGALSCAL--AEHKPYSIGDSYISELATRENL-------RLNGIDESSV 94 + GPV +L D GAL+ L A H D +E + NL RL G + + Sbjct: 61 VPGPVAVLEDRHGALTLPLLMAGHDVRVHQDDASAERSLDANLAAWRAAGRLGG-ETGEL 119 Query: 95 KFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLEL 154 + + + + VL+ +P++L L++ R + V ++AG RD H S Sbjct: 120 ERSATPEEAVRGARTVLLPLPRSLDELDRLSRIVAAVADPGVVLLAGG--RDKHMS--PR 175 Query: 155 FEKVLGPT----TTTLAWKKARLINCTFNEPQLAD-APQTVSWKLEGTDWTIH--NHANV 207 VLG +KAR++ P + P+ + G +H HA Sbjct: 176 MNAVLGAAFEDVVAGRGRRKARVLTARGPRPGVTPRPPEEADRDVPGVG-RLHLVAHAGT 234 Query: 208 FSRTGLDIGARFFMQHLPENLE--GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAV 265 F D G+R + L ++ G +VDLGCGNG++ + P V+ D+S +AV Sbjct: 235 FGGAAADPGSRLLLTSLADDPRPPGRLVDLGCGNGLLSVGAARLWPHVTVLATDQSAVAV 294 Query: 266 ASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHH 325 AS+ N DR + ++AL+ VL NPPFH +A+ +VA + Sbjct: 295 ASTLATARAN--RVADRVRAVRDDALATWPDGTEECVLLNPPFHDGNAVDPSVAHRLVAA 352 Query: 326 ARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVV 368 A R L+ G L+ V N HL Y L+++ G A + F V Sbjct: 353 AARVLEPGGRLWCVWNSHLRYRPMLEELVGPTRQTARDRTFTV 395 >UniRef50_C9NP08 Ribosomal RNA small subunit methyltransferase C n=9 Tax=Vibrionaceae RepID=C9NP08_9VIBR Length = 357 Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 85/292 (29%), Positives = 132/292 (45%), Gaps = 34/292 (11%) Query: 95 KFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLEL 154 +F D T Q ++L+ PK A E L L + +T ++ + R S ++ Sbjct: 87 EFTDQT-----QADMILLYWPKAKAEAEFLLAMLLAKLGPETEVVVVGENR----SGVKS 137 Query: 155 FEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVS---W------KLEGTDWTIHNHA 205 EK+ P + AR C+F Q + P + W +G + TI + Sbjct: 138 IEKMFKPYGPINKFDSAR--RCSFYWGQCLEQPAEFNLNDWFKQYRVSYQGHELTIKSLP 195 Query: 206 NVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAV 265 VFS DIG++ + LP L G+++D GCG GVIG + N + K+ D S +AV Sbjct: 196 GVFSHGQFDIGSQLLLDTLPA-LSGKVLDFGCGAGVIGSVMATLNAEIKLEMCDISALAV 254 Query: 266 ASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFH----QQHALTDNVAWE 321 SS+ +E N L F + + ++F ++ NPPFH ++ T+ + E Sbjct: 255 ESSKATLEAN---GLKGRVFASDIYSDTSQDYQF--IISNPPFHAGLDTSYSATETLLAE 309 Query: 322 MFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 H R G+L IVAN L Y +++ FGNC T+ NKF + A K Sbjct: 310 APKHQRS----GGQLLIVANSFLKYPPIIQQAFGNCETLNKTNKFTIYYAKK 357 >UniRef50_Q65S65 Ribosomal RNA small subunit methyltransferase C n=30 Tax=Gammaproteobacteria RepID=RSMC_MANSM Length = 333 Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 95/196 (48%), Gaps = 18/196 (9%) Query: 177 TFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLG 236 T+ PQL + +++ VFS LD+G + + + +N+ G+++DLG Sbjct: 155 TYRSPQLGEL-------------IVYSLPGVFSANELDVGTQLLLSTVKDNIRGDVLDLG 201 Query: 237 CGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 296 CG GVIG + KNP AKV D MA+AS+ E + E + + ++ S VE Sbjct: 202 CGAGVIGSMIKLKNPPAKVTMTDIHAMALASA----ERTLLENKLSGQVLASDVFSHVEG 257 Query: 297 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGN 356 +F+ ++ NPPFH E+ +A+ L GEL IVAN L Y L + FG Sbjct: 258 -KFDLIISNPPFHDGIDTAYRAVRELISNAKWHLVPGGELRIVANAFLPYPDLLDEYFGG 316 Query: 357 CTTIATNNKFVVLKAV 372 +A NKF V + Sbjct: 317 HKVLAQTNKFKVYSVI 332 >UniRef50_A3D8E4 Ribosomal RNA small subunit methyltransferase C n=21 Tax=Shewanella RepID=RSMC_SHEB5 Length = 347 Score = 97.4 bits (241), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 60/169 (35%), Positives = 85/169 (50%), Gaps = 6/169 (3%) Query: 198 DWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVF 257 + +I N VFS LD+G + HLP L G ++D GCG GVI LL P + Sbjct: 177 EISICNLVGVFSEKRLDLGTELLLSHLP-TLSGRVLDFGCGAGVIAAALLKAQPSLSLEC 235 Query: 258 VDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDN 317 VD + MA+AS L + N A + ++ L+ +FN ++ NPPFH A T + Sbjct: 236 VDINAMALASCELTLAANGMTA----KVYPSDGLAQTTG-KFNGIISNPPFHDGLASTTS 290 Query: 318 VAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKF 366 +A + + L+ NG IVANRHL Y + FG +A NNK+ Sbjct: 291 IAQNFVTDSAKQLQHNGIWQIVANRHLPYSDIIAAEFGQLKVVADNNKY 339 >UniRef50_A9B5U4 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5U4_HERA2 Length = 365 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 108/223 (48%), Gaps = 8/223 (3%) Query: 154 LFEKVLGPTTTTLAWKKARLINCTFNEPQLADAP-QTVSWKLEGTD--WTIHNHANVFSR 210 L E+++GP+ TL +KK + F P QT +L D TI A VF++ Sbjct: 146 LLEQIVGPSVKTL-YKKGHHVVMAFRPLHWQAQPSQTTQHQLSHGDHALTIEATAGVFAQ 204 Query: 211 TGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRL 270 LD + + + ++DLGCG G++G+ L + + ++D + +A+ +++ Sbjct: 205 GQLDPASAMLLDAVHIQANQRVLDLGCGAGILGMFLQQRESTLALTYIDSTMVAIEATKR 264 Query: 271 NVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCL 330 N++TN + ++ + V +F+ V+ NPPFH + +A + A + L Sbjct: 265 NLQTNQLTG----RVLASDGIQAVNGEQFDLVVSNPPFHVGRVQSPQLAENLLKQAVQVL 320 Query: 331 KINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 NG+L IVANR L Y L+ + N +A + ++ VL K Sbjct: 321 APNGQLVIVANRFLRYEPLLETVLSNVHELAGDQRYKVLVGTK 363 >UniRef50_UPI0000E105EB rRNA (guanine-N(2)-)-methyltransferase n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E105EB Length = 362 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 75/278 (26%), Positives = 126/278 (45%), Gaps = 19/278 (6%) Query: 111 LIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKK 170 ++ +PK L L L VV + +I + S + EKV + K Sbjct: 77 IVYMPKVKTHLGMLLANLSNVVKTGGQIFIVGHNKSGIKSCAKHLEKVCDTVNKVDSAKH 136 Query: 171 ARLINCTFN-EPQ---LADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPE 226 L T P+ L D T +++L W + +VFS+ LD+G +QHLP+ Sbjct: 137 CGLFVGTVKANPKAFNLDDFLTTKTYELNEIKWEVAGMPSVFSQDALDLGTHLLLQHLPQ 196 Query: 227 NLEGEIVDLGCGNGVIGL--------TLLDKN--PQAKVVFVDESPMAVASSRLNVETNM 276 N++ +++D CG GVI T D N P +V D +++ ++ + N Sbjct: 197 NIKNDVLDFACGAGVIAAFVGVRHLHTFPDPNNRPNLHLVLSDIHALSLYCAQKTLHLNN 256 Query: 277 PEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGEL 336 + + + +N LS VE +F+ ++ NPPFH+ ++A AR L G L Sbjct: 257 LQG----DVVASNGLSNVEG-KFSHIITNPPFHKGINTDYSIAHSFLVQAREHLIEQGHL 311 Query: 337 YIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKL 374 +VAN L+Y +++ G C + ++NKF V +AV + Sbjct: 312 TLVANSFLNYAVDMEEHVGPCQKLISDNKFAVYQAVGI 349 >UniRef50_C7MEY2 16S RNA G1207 methylase RsmC n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MEY2_BRAFD Length = 411 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 97/362 (26%), Positives = 162/362 (44%), Gaps = 40/362 (11%) Query: 48 VLILNDAFGALSC----ALAEHKPYSIGDSYISEL--ATRENLRLNGIDESS-------- 93 +++++DA G L+ ++AEH P ++ S+ S L AT R G E+ Sbjct: 54 LIVVDDATGELTAFALASVAEH-PDAVVLSWTSSLPLATSLRERFAGQIEAGRLHVPAGP 112 Query: 94 -VKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTR----IIAGAKARDIH 148 V L+ A + +VL+++PK + LE + R L V + + IIAG + + + Sbjct: 113 DVLPLEQAAAEVEGHLLVLMRLPKAVHALEDRARRLAAAVRTGGQDGLGIIAGGRVKHMT 172 Query: 149 TSTLELFEKVLGPTTTTLAWKKARLINCT-----FNEPQLADAPQTVSWKLEGTDWTIHN 203 + + V + K+R + T P D V+ + + + + Sbjct: 173 RAQNDALATVFSEVRASRGIGKSRALIATELRASSAAPVAIDGSARVAVRGQQRELALRG 232 Query: 204 HANVFSRTGLDIGARFFMQHLPENL-EGEI---------VDLGCGNGVIGLTLLDKNPQA 253 VF D G+R +Q L L G++ DLGCGNG++ L P+A Sbjct: 233 VGAVFGGASADAGSRLLLQALDRALVSGDLTADAPVTAAADLGCGNGLMTAHLAAALPEA 292 Query: 254 KVVFVDESPMAVASSRLNVETNMPEALDRCEFMI--NNALSGVEPFRFNAVLCNPPFHQQ 311 V+ D AV+S+R + N AL+R E + ++ALS V + VL NPPFH Sbjct: 293 SVLGSDADADAVSSTRATLAAN---ALEREEVEVSWDDALSRVADSSLDLVLLNPPFHDG 349 Query: 312 HALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 ++ + + A R L+ G+L+ V N HL Y ++++ G A + +F VL A Sbjct: 350 TSVDATLVQGLLDTAARVLRPGGQLWFVHNSHLRYRTEVERRAGAVQQRARDRRFTVLSA 409 Query: 372 VK 373 V+ Sbjct: 410 VR 411 >UniRef50_Q7MZN0 Ribosomal RNA small subunit methyltransferase C n=6 Tax=Enterobacteriaceae RepID=RSMC_PHOLL Length = 338 Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 73/265 (27%), Positives = 120/265 (45%), Gaps = 19/265 (7%) Query: 115 PKTLALLEQQLRALRKVVTSDTRII------AGAKARDIHTSTLELFEKVLGPTTTTLAW 168 PK+ QLR+L V+ I +G ++ D + F K+ +L + Sbjct: 85 PKSKQEARFQLRSLFSVLPKGINIFIVGENRSGVRSVDKLMDGMATFRKIDSARRCSLFY 144 Query: 169 KKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL 228 + +E Q S+++E ++ VFS+ LD+G+R + + L Sbjct: 145 GQLE------HEVQFEQDNWWNSYQVENV--IVNTLPGVFSQDELDVGSRLLLSTFDKPL 196 Query: 229 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN 288 G ++D+ CG GV+ L KNP+ + D + A+ASS+ ++ N E +++ Sbjct: 197 SGNLLDIACGAGVLAAVLGKKNPELALTLSDVNAAAIASSKATLKANKLEG----HVVVS 252 Query: 289 NALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFH 348 N S +E +F+ ++ NPPFH+ + ++ A LK G+L IVAN L Y Sbjct: 253 NVYSNIED-KFDWIISNPPFHEGLKTSLLATDDLIRQAPNHLKPGGKLRIVANAFLPYPD 311 Query: 349 KLKKIFGNCTTIATNNKFVVLKAVK 373 L K FG IA KF V +A K Sbjct: 312 LLDKTFGTHEVIAQTGKFKVYQATK 336 >UniRef50_Q1QUF2 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=RSMC_CHRSD Length = 333 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 86/278 (30%), Positives = 125/278 (44%), Gaps = 22/278 (7%) Query: 107 PGVVLIKVPKTLALLEQQLRALRKVVTSDTRI-IAGAKARDIHTSTLELFEKVLGPTTTT 165 PG VL PKT AL E L AL + T + + G + L LG Sbjct: 70 PGAVLFW-PKTHALGEWWLLALCAALPEGTPLQVVGEHQGGVKRVLKSLAALGLGCRKV- 127 Query: 166 LAWKKARLINCTF---NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQ 222 AR CT +LA +P+ + E T+ +H VF LD G R ++ Sbjct: 128 ---DSAR--RCTLYATRTARLALSPEAAWTRFEAAGLTLESHPGVFGHGKLDDGTRQLLE 182 Query: 223 HLPENLEG----EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE 278 LP L ++D+GCG+G++G L + A+V VD AVA++R + N Sbjct: 183 VLPTALGDPAGQRVLDVGCGDGILGAWLGVRG--AQVAAVDLDAFAVAATRRTFQANG-V 239 Query: 279 ALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYI 338 A + + + +SG ++A++ NPPFHQQ A+ A + A L G L + Sbjct: 240 AGEAWQSDVFGDVSG----SYDAIVSNPPFHQQRAIDYGPAERLIREAPARLVPGGRLVL 295 Query: 339 VANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGR 376 VAN L Y L+ FG T +A + +F V +AVK R Sbjct: 296 VANAFLPYPRWLEDAFGEFTVLADDRRFRVYQAVKTRR 333 >UniRef50_Q1MZV1 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Bermanella marisrubri RepID=Q1MZV1_9GAMM Length = 335 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 90/180 (50%), Gaps = 4/180 (2%) Query: 198 DWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVF 257 D + VFS+ LD G +++LP ++G ++D GCG GVIG + ++ Sbjct: 160 DMHVQALPGVFSQEKLDKGTEVLLKNLPRKIKGRVLDFGCGAGVIGCYVQQHREVDEIDM 219 Query: 258 VDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDN 317 +D+ +AV S++ +E N ++ E +N VE R+N ++ NPPFHQ Sbjct: 220 LDDDLLAVKSAQRTIEKN---SIPYAEAFASNGFDEVED-RYNWIISNPPFHQGVKTHYE 275 Query: 318 VAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRR 377 V + A+ LK++G+L IVAN L Y LK F +A N F VL+ + R+ Sbjct: 276 VTEQFLAKAKDHLKLSGKLLIVANEFLSYEVILKYHFKMVKEVARENGFKVLQCEGIMRK 335 >UniRef50_B4S2L3 Ribosomal RNA small subunit methyltransferase C n=2 Tax=Alteromonas macleodii RepID=RSMC_ALTMD Length = 360 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 72/266 (27%), Positives = 114/266 (42%), Gaps = 10/266 (3%) Query: 110 VLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWK 169 V+I +PK + LR +V + RI + + S +L ++ G T + + Sbjct: 99 VMISLPKAKTHFQMLLRMAASMVGQNGRIHVVGENKGGIKSAAKLMQQ-YGATQKVDSAR 157 Query: 170 KARLINCTFNEPQLADAPQ----TVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLP 225 LI P LA + T ++ +EGT W + + VFS LD G ++ L Sbjct: 158 HCSLITVIVEAPHLAFEAEAWIDTNTYAVEGTSWKVASMPGVFSYKELDAGTELLLEKLS 217 Query: 226 ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEF 285 +L G+++D CG GVI ++ K P K+ D S +A+ S L + N A Sbjct: 218 TSLSGDVLDFACGAGVIASYIMLKYPHLKLHLTDVSALAIYCSALTLAENQLAA----TL 273 Query: 286 MINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLD 345 + L G+ + ++ NPPFH V A+ L G + +VANR L Sbjct: 274 YAADGLHGMTN-KVQHIVTNPPFHTGIKTDYTVTKRFISDAKARLTRGGTMQMVANRFLP 332 Query: 346 YFHKLKKIFGNCTTIATNNKFVVLKA 371 Y L + F T A ++F V +A Sbjct: 333 YPGLLSEHFQTVYTTAQTSQFSVYQA 358 >UniRef50_C4LB19 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LB19_TOLAT Length = 350 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%) Query: 206 NVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAV 265 VFS LD G + + LP L G+I+D+GCG GVIG + + P A VV D + +A+ Sbjct: 190 GVFSAGELDEGTQLLLDSLPA-LSGDILDVGCGAGVIGAAICQRTPDANVVMTDVNALAL 248 Query: 266 ASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHH 325 S+ +E N A + + ++ S VE +F+ ++ NPPFH H Sbjct: 249 LSATKTLEGNNLSA----QVIASDMFSDVEA-KFDFIISNPPFHAGLKTNYEATERFLHQ 303 Query: 326 ARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 A LK G+L++VAN+ L Y L +F + + I N++F +++A Sbjct: 304 APAHLKRGGQLFLVANKFLRYEPILADVFHSVSVIKENSRFKIIRA 349 >UniRef50_Q2NW11 Ribosomal RNA small subunit methyltransferase C n=164 Tax=Bacteria RepID=RSMC_SODGM Length = 350 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 87/187 (46%), Gaps = 7/187 (3%) Query: 191 SWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKN 250 S++LE D I VFSR GLD G++ + +G + D+GCG GV+ L Sbjct: 162 SYQLE--DVVIKTLPGVFSRDGLDNGSQLLLSTFDRPFQGHVADIGCGTGVLSAVLAKGA 219 Query: 251 PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ 310 ++ D A+A+SR + N + E + + S + RF+ ++ NPPFH Sbjct: 220 AGVQLTLSDAHAPALAASRATLAVNGLQG----EVLAGDVYSAISG-RFDMIISNPPFHD 274 Query: 311 QHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLK 370 A + A L+I GEL IVAN L Y L +FGN + N +F V + Sbjct: 275 GMQTNLKAAETLIRGALNHLRIGGELRIVANAFLPYPDLLDAVFGNHQVLVQNGRFKVYQ 334 Query: 371 AVKLGRR 377 A+ +R Sbjct: 335 AIHQVKR 341 >UniRef50_A2BME9 Predicted Methyltransferase n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BME9_HYPBU Length = 198 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 12/200 (6%) Query: 178 FNEPQLADAPQT-VSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQH--LPENLEGEIVD 234 + P+ P+ VS L G + VFS +D G R ++H +PE EG ++D Sbjct: 5 YYRPRSRKGPRMLVSDYLRGVTVEFYVSTEVFSPREVDEGTRLLIEHAIVPE--EGTVLD 62 Query: 235 LGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV 294 +GCG G IG+TL +P+ VV VD +P AV +RLN N E +R E + + V Sbjct: 63 MGCGYGAIGITLAKAHPRLHVVMVDVNPKAVELARLNARHNGVE--NRVEVLQGDLYEPV 120 Query: 295 EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKL-KKI 353 + + F+A++ NPP + + + E H LK G L IV + + +L +K Sbjct: 121 KGYHFDAIISNPPLAAGMKIIEKLILEAPAH----LKPGGSLQIVMRKGAEKAKELMQKA 176 Query: 354 FGNCTTIATNNKFVVLKAVK 373 FGN + + +L A K Sbjct: 177 FGNAKVLLRKKGYTILYAEK 196 >UniRef50_C6APC6 Ribosomal RNA small subunit methyltransferase C n=3 Tax=Pasteurellaceae RepID=C6APC6_AGGAN Length = 334 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 62/192 (32%), Positives = 93/192 (48%), Gaps = 19/192 (9%) Query: 177 TFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLG 236 ++ PQLAD T++ VFS LD G + L +N+ G+++D+G Sbjct: 157 SYQSPQLADV-------------TVYALPGVFSAAELDGGTVLLLSTL-KNVSGDVLDIG 202 Query: 237 CGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 296 CG GVIG + +P+ K+V D MA+ S++ + N + + ++ S VE Sbjct: 203 CGAGVIGSYIQKHHPKTKLVMTDIHAMALESAQRTLRENQLQG----TVLASDVFSHVEG 258 Query: 297 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGN 356 +F+ ++ NPPFH E+ A+ LK GEL IVAN L Y L + FG Sbjct: 259 -KFDLIISNPPFHDGIDTAYTAVNELIKQAKWHLKAGGELRIVANAFLPYADWLDQHFGG 317 Query: 357 CTTIATNNKFVV 368 +A NNKF V Sbjct: 318 HEVLAKNNKFKV 329 >UniRef50_A8LQD1 Ribosomal RNA small subunit methyltransferase C n=2 Tax=Rhodobacteraceae RepID=A8LQD1_DINSH Length = 333 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 6/166 (3%) Query: 208 FSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVAS 267 FS +D G+ HLP L+G+++DLG G G + L + V+ A+ + Sbjct: 164 FSAGAVDAGSALLAAHLPARLQGDVLDLGAGWGYLAKAALASGQVTGMDLVEAEFDALEA 223 Query: 268 SRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHAR 327 +R NV+ R F+ +A R++A+LCNPPFH + A Sbjct: 224 ARRNVDDP------RARFLWEDAAVFAPGKRYDAILCNPPFHTSRKADPAIGQMFLRTAA 277 Query: 328 RCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 R LK +G L +VANRHL Y H L + FG + + + A K Sbjct: 278 RLLKPSGVLGLVANRHLPYEHTLAECFGEAQPVTEAQGYKIFHARK 323 >UniRef50_Q3ILJ2 Ribosomal RNA small subunit methyltransferase C n=3 Tax=Alteromonadales RepID=RSMC_PSEHT Length = 341 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/270 (25%), Positives = 130/270 (48%), Gaps = 15/270 (5%) Query: 109 VVLIKVPKTLALLEQQLRALRKVVTSDTRII------AGAKARDIHTSTLELFEKVLGPT 162 +V++ PK+ + L +R V+T+D ++ +G K+ + + F + Sbjct: 80 LVILYYPKSKPEVLMALDNIRAVITADAELLVVGENKSGVKSIEKQLTDKANFSNKIDSA 139 Query: 163 TTTLAWKKARLINCT-FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFM 221 + + A L + FN ++D + + + +++T + VF+ LD+G + + Sbjct: 140 KHCVLYSFAELKQLSQFN---ISDYHKPFTVSVADSEFTAISIPGVFNHGNLDVGTKILL 196 Query: 222 QHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALD 281 ++ P +G ++D GCG G+I L +NP V D S +A+ ++ ++ N + Sbjct: 197 ENAPLIKQGTVLDFGCGAGLIATYLGLQNPALSFVCSDVSALAIYATTQTLKLNNIKG-- 254 Query: 282 RCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 341 E ++++ L+ + +F+ ++ NPPFH A VA +A++ L G+L IVAN Sbjct: 255 --EALLSDGLTNITG-KFDLIISNPPFHTGIATDYTVAETFLANAKQHLTKAGKLNIVAN 311 Query: 342 RHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 L Y L+ F N T+ NNKF V + Sbjct: 312 SFLKYPPILEAQFDNYQTVFKNNKFAVYSS 341 >UniRef50_Q2SJX3 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Hahella chejuensis KCTC 2396 RepID=RSMC_HAHCH Length = 342 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 57/168 (33%), Positives = 81/168 (48%), Gaps = 5/168 (2%) Query: 206 NVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAV 265 VFS LD G +Q LPE ++D GCG GVIG TL + P+A V D + +A+ Sbjct: 180 GVFSAGRLDEGTEVLLQSLPELHGRRLLDFGCGCGVIGATLKKRYPKASVELTDINLLAL 239 Query: 266 ASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHH 325 S+ E N E ++ L+ V+P +A++ NPPFHQ V + Sbjct: 240 KSAARTAEANGVE----LNVYASDGLAEVQP-GVDAIITNPPFHQGVKQDTRVTQQFLRD 294 Query: 326 ARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 R LK G L +VANR L Y ++ G + N++F V AV+ Sbjct: 295 CARVLKPGGSLTLVANRFLPYPDWIEAHVGPVRVLFENSRFKVYHAVR 342 >UniRef50_Q47VN0 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Colwellia psychrerythraea 34H RepID=RSMC_COLP3 Length = 357 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 11/269 (4%) Query: 109 VVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAW 168 +V+I PK+ A L L + + +T+II + + S +L + + A Sbjct: 91 LVIIAFPKSKAELNFTLAMITHCINDETKIILVGEKKGGIQSAAKLTQHIFSCCQKVDAA 150 Query: 169 KKARLINCTFNEPQLADAPQTVSW------KLEGTDWTIHNHANVFSRTGLDIGARFFMQ 222 + L F +L+D W +EG + TI + VFS+ LD+G + Sbjct: 151 RHCLLFVGLFQPERLSDVFNLQDWFKKYQITVEGIELTIASLPGVFSQQKLDVGTALLLS 210 Query: 223 HLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDR 282 +LP + G+++D GCG GVI + K + +D S +A+ S++ ++ N Sbjct: 211 NLPSKMTGKVLDFGCGAGVISCFIGKKFSGTNLSLLDVSALALTSAQESLALNGLSG--- 267 Query: 283 CEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 342 +N+LS V + V+ NPPFHQ + + + L G + IVAN Sbjct: 268 -NVFPSNSLSDVNE-HYQHVVSNPPFHQGVKTHYQASEDFLAGINKKLNKQGNITIVANS 325 Query: 343 HLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 L Y ++ GN I + F + +A Sbjct: 326 FLRYQPIMETHIGNTRVITKDKGFTIYRA 354 >UniRef50_Q6FE96 Ribosomal RNA small subunit methyltransferase C n=12 Tax=Acinetobacter RepID=RSMC_ACIAD Length = 338 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 81/283 (28%), Positives = 130/283 (45%), Gaps = 16/283 (5%) Query: 98 DSTADYPQQ-PGVVLIKVPKTLALLEQQLRALRKVVTSDTRI-IAGAKARDIHTSTLELF 155 D +P Q P V+I VPK+ LL L + + + I + G K + ++ +L Sbjct: 60 DFAVTFPDQIPDQVIIFVPKSKELLSYLLHVVVSHLPAGQHIFLVGEKKGGVERASKQL- 118 Query: 156 EKVLGPTTTTLAWKKARLINCTFNEPQ----LADAPQTVSWKLEGTDWTIHNHANVFSRT 211 + G T + + +L T + L + S K E I+ VFS+ Sbjct: 119 -QSYGKTVKLDSARHCQLWQTTIETTEQLKPLEQWLKHYSVKNENIQLEIYALPGVFSQN 177 Query: 212 GLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLN 271 LDIG + +L + G+I D GCG GVI L +P ++ +D A+ S+ Sbjct: 178 HLDIGTAVLLPYLNQIKLGKIADFGCGAGVISAYLAQLSPHNEIHALDIDAFALRSTEFT 237 Query: 272 VETNMPEALDRCEFMINNALSGVE--PFRFNAVLCNPPFHQQHALTDNVAWE-MFHHARR 328 + N A +R +A++G++ P + ++ NPPFHQ TD A E + A++ Sbjct: 238 FQRN-GLASERLHL---HAVTGIQDAPKALDVIVSNPPFHQG-IHTDYSASEGLCKTAKQ 292 Query: 329 CLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 L +GEL+IVANR L+Y +++ FG C F +L A Sbjct: 293 HLNTSGELWIVANRFLNYPLLIEQTFGQCQVKTDQQGFKILYA 335 >UniRef50_B9Y2U0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2U0_9FIRM Length = 203 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 94/196 (47%), Gaps = 13/196 (6%) Query: 182 QLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE-IVDLGCGNG 240 QL + +S++ G + VF ++ +D G+ ++ + E G+ I+DLGCG G Sbjct: 15 QLPQNRKEISFRFSGFIIPLITDNGVFCKSEVDFGSYVLLKTIKEEPLGDHILDLGCGYG 74 Query: 241 VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFN 300 VIG+T+ P A+++ VD +P AV + LN + N EA R + N + Sbjct: 75 VIGVTVKKMFPDAEMLMVDVNPRAVELAVLNAQKNSVEAEVRVSDIFGNVTE-----TLS 129 Query: 301 AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH---LDYFHKLKKIFGNC 357 +L NPP V + MF A L+ G LY+V + L K+++IFGNC Sbjct: 130 DILTNPPIRA----GKKVIYAMFEQAYDHLRPQGHLYVVIRKQQGALSAKAKIEEIFGNC 185 Query: 358 TTIATNNKFVVLKAVK 373 I + +LK+ K Sbjct: 186 EVINKEKGYYILKSTK 201 >UniRef50_A0LDZ4 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDZ4_MAGSM Length = 356 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 9/180 (5%) Query: 198 DWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVF 257 D T+ +FS D + +Q L ++D GCG G+IG TL +P +V Sbjct: 181 DVTLATLPGLFSWAEPDAASLMLLQALQHQRMYHLLDWGCGCGLIGTTLAKHHPTLQVTL 240 Query: 258 VDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF----RFNAVLCNPPFHQQHA 313 D+ A S +V N +A RC+ ++ + G+ P F+ ++ NPPFH+ + Sbjct: 241 SDDMVRATRCSTESVRLNQLQA--RCQVILED---GIGPHLRNQGFDTIVTNPPFHRGQS 295 Query: 314 LTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 L VA E A + L+ G L++VAN LDY L+ F T+ +++F+V KA+K Sbjct: 296 LNREVALEFIGDAVKILERGGALWLVANSFLDYGPILQASFKKVETVLRDSRFIVWKAIK 355 >UniRef50_B6AVZ4 Methyltransferase small n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AVZ4_9RHOB Length = 331 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 8/174 (4%) Query: 206 NVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVV-FVDESPMA 264 VFS +D + MQH+P +L G + DLG G G + L +NP + + V+++ A Sbjct: 163 GVFSADDIDPASELLMQHIPTSLSGHVADLGAGWGYLSDRALSENPSIETLHLVEDNAAA 222 Query: 265 VASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFH 324 + +R NVE R EF + L+ + F+A+L NPPFH + Sbjct: 223 LECARANVED------PRAEFHWADVLNWRQSKLFDAILMNPPFHTSRIAEPQIGINFVR 276 Query: 325 HARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR 378 A L+ G+L++VAN HL Y +++ F I N+F V A + GR + Sbjct: 277 AAASLLRPEGKLFLVANAHLPYETTIEQSFEKYDLIVRTNRFKVFCATR-GRAK 329 >UniRef50_A3V764 Methyltransferase, putative n=3 Tax=Rhodobacterales RepID=A3V764_9RHOB Length = 323 Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 52/172 (30%), Positives = 79/172 (45%), Gaps = 6/172 (3%) Query: 205 ANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMA 264 A VFS +D G+ Q LP L + DLG G G + +L ++ A + ++ ++ Sbjct: 158 AGVFSDGAVDAGSALLAQALPPKLPARMADLGAGWGYLAQAVLARDSVASLDLIEAEALS 217 Query: 265 VASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFH 324 + +RLNV R F +AL ++ ++ NPPFH A + Sbjct: 218 LQCARLNVTDP------RARFHWADALRFTPDKAYDGIVMNPPFHVGRAADAGLGRAFIQ 271 Query: 325 HARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGR 376 A R L +G+L++VANRHL Y + + F N I NN F + A K R Sbjct: 272 AASRLLAPHGKLWMVANRHLPYEQAMSENFRNVDIIGGNNAFKLFHATKPTR 323 >UniRef50_C4K8X0 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=RSMC_HAMD5 Length = 336 Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 73/272 (26%), Positives = 118/272 (43%), Gaps = 7/272 (2%) Query: 100 TADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVL 159 + D + V+ PK A + QL L + S T I + R S +L + + Sbjct: 70 SEDLVSKTDTVIFYWPKNKAQAQFQLEHLCSLFPSQTNIFIVGENRSGIGSAKDLLAENV 129 Query: 160 GPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARF 219 G A + + C +P Q ++++ D I VFS LD G++ Sbjct: 130 GLHKMDAARRCSLYYGCLKQKPVFNMESQWRRYQVK--DVQIKTLPGVFSANQLDEGSQL 187 Query: 220 FMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEA 279 + L G+++DL CG GV+G L ++PQ ++ D + A+ SSR N+ N +A Sbjct: 188 LLSSFDIPLSGKVLDLACGAGVLGTILARQSPQIELTLSDVNAAALESSRANLAVNHIKA 247 Query: 280 LDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 339 ++ + L P RFN +L N PFH+ + + A L G+L +V Sbjct: 248 R-----VVPSDLYSDIPERFNLILSNLPFHKGLKTDIKMIEKCIEEAPGHLYKGGKLRLV 302 Query: 340 ANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 AN L Y L + FG+ + N +F V +A Sbjct: 303 ANAFLPYPKLLNRTFGHYEVLTQNARFKVYQA 334 >UniRef50_Q1GDK1 Methyltransferase small n=13 Tax=Rhodobacteraceae RepID=Q1GDK1_SILST Length = 328 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 74/269 (27%), Positives = 114/269 (42%), Gaps = 16/269 (5%) Query: 109 VVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAW 168 VV I K LA +QL A T ++ GAK I + EL ++ + A Sbjct: 75 VVFIPRSKPLA---RQLVAQAVAATQGPVLVDGAKTDGIDSLLKELNKRTRPSHAISKAH 131 Query: 169 KKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL 228 KA I + P V D VFS +D + + LP+ L Sbjct: 132 GKAFCIEGGIDLSDWVPGPSEV-------DGGFVTAPGVFSADAIDPASALLARALPKKL 184 Query: 229 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN 288 E+ DLG G G + +L ++ + V+ +A+ ++ NV EF Sbjct: 185 GKEVADLGAGWGYLSAEILRRSNLETLHLVEADHVALTCAQTNVTDA------HAEFHWA 238 Query: 289 NALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFH 348 +A S + +AV+ NPPFH A ++ +A R LK G+L++VANRHL Y Sbjct: 239 DARSWGQKGSLDAVVMNPPFHSGRAAEPSLGQAFIANAARLLKPAGQLWMVANRHLPYEA 298 Query: 349 KLKKIFGNCTTIATNNKFVVLKAVKLGRR 377 L + F + A +N+F +L V+ R+ Sbjct: 299 LLGECFVSFEEAAGDNRFKILHGVRPRRK 327 >UniRef50_A5VYJ3 Ribosomal RNA small subunit methyltransferase C n=23 Tax=Pseudomonadaceae RepID=RSMC_PSEP1 Length = 332 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 5/168 (2%) Query: 206 NVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAV 265 VFS LD G ++HL G ++D GCG GV+G TL + PQ++V +D AV Sbjct: 169 GVFSHGRLDRGTALLLKHLDGLPGGHMLDFGCGAGVLGATLKRRYPQSRVTLLDVDAFAV 228 Query: 266 ASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHH 325 A+SRL + N E E + + + P + +L NPPFH + + Sbjct: 229 AASRLTLAANGLEG----EVISGDGIDAA-PTELSLILSNPPFHTGVHTNYQASENLLKK 283 Query: 326 ARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 + L+ GE+ +VAN L Y ++ GNC + F + +A + Sbjct: 284 SAVHLRKGGEMRLVANSFLRYQPLIEGALGNCQVRDEADGFRIYQATR 331 >UniRef50_C5QUQ6 16S rRNA methyltransferase n=3 Tax=Staphylococcus epidermidis RepID=C5QUQ6_STAEP Length = 244 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 14/201 (6%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGA----RFFMQHLPENLEGEIVDL 235 +P + P+ +S++++ + A VFS+ +D G+ + F++ P I D+ Sbjct: 50 QPDVKSNPKRISYQIKNAQLELTTDAGVFSKDNVDFGSDLLIKTFLKEHPPGPSKTIADV 109 Query: 236 GCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE 295 GCG G IGL + +P ++ +D + A+A + +N N +D + ++ LS V Sbjct: 110 GCGYGPIGLAIGKVSPHHQITMLDINNRALALAEMNKTKNQ---VDNVTIIESDCLSAVN 166 Query: 296 PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKI-- 353 F+ +L NPP ++ +F A LK GELY+V + KKI Sbjct: 167 HQCFDYILTNPPIRA----GKDIVHRIFEQAFDRLKTTGELYVVIQKKQGMPSAKKKIEE 222 Query: 354 -FGNCTTIATNNKFVVLKAVK 373 FGN IA + + +LK++K Sbjct: 223 LFGNVEIIAKSKGYYILKSIK 243 >UniRef50_Q67JT6 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67JT6_SYMTH Length = 206 Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 10/194 (5%) Query: 181 PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG 240 P +A A + S L G D+ A VFSR +D G+ ++ + ++DLGCG G Sbjct: 10 PGVAHAETSFSVTLRGMDFRFVTDAGVFSRERVDFGSLLLIEAMEIGPADTVLDLGCGYG 69 Query: 241 VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFN 300 IG+ PQ + V+ + A +R N+E N A+ E + + L V F+ Sbjct: 70 PIGIVAARLAPQGFIYMVEINERAAELARRNLEAN---AIANAEVRVGDGLEPVAGIAFD 126 Query: 301 AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL---DYFHKLKKIFGNC 357 AV+ NPP A + + A LK G L++V KL+ +FGN Sbjct: 127 AVVTNPPIRAGKATV----YRLLDEAHAALKPGGSLWVVVQNKQGAPSMKRKLEALFGNV 182 Query: 358 TTIATNNKFVVLKA 371 +A + VL+A Sbjct: 183 EDVARQAGYRVLRA 196 >UniRef50_A4WPY7 16S rRNA m(2)G 1207 methyltransferase n=5 Tax=Rhodobacteraceae RepID=A4WPY7_RHOS5 Length = 333 Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 14/172 (8%) Query: 206 NVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAV 265 +FS D G++ ++ LP +L G +VDLG G G + +L + ++ V+ A+ Sbjct: 163 GIFSADAPDRGSQLLLEALPADLSGRVVDLGAGWGFLARAVLGRRAVKRIDLVEAEHAAL 222 Query: 266 ASSRLNVETNMPEALDRCEFMINNALSGVEPFRF----NAVLCNPPFHQQHALTDNVAWE 321 +RLN+ +R F +A FR + V+CNPPFH + Sbjct: 223 DCARLNITD------ERAHFHWADATR----FRLSKPADVVVCNPPFHTTREADPTLGMG 272 Query: 322 MFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 A R L +G L++VANRHL Y L+ +F I + F +++A + Sbjct: 273 FLQAAARLLAPSGLLWLVANRHLPYDRGLRALFREVEEIGGDAAFRIVRAAR 324 >UniRef50_Q15ZS7 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Pseudoalteromonas atlantica T6c RepID=RSMC_PSEA6 Length = 343 Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 54/163 (33%), Positives = 79/163 (48%), Gaps = 5/163 (3%) Query: 206 NVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAV 265 VFS LD G + + ++ + G I+D CG G+IG KNPQA+VV D S +A+ Sbjct: 181 GVFSHGELDTGTQLLLDNIDRVVSGRILDFACGAGIIGCFAGLKNPQAQVVMSDVSALAI 240 Query: 266 ASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHH 325 S+ + E N +A + + +N L G +F V NPPFH +V Sbjct: 241 YCSQKSAELNGVKA----QVIPSNGL-GALTGKFAQVFTNPPFHTGIKTDYSVTEGFMQQ 295 Query: 326 ARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVV 368 + L+ G L +VAN+ L Y +L K F + T+ KF V Sbjct: 296 LKNHLQDRGSLILVANKFLRYADELDKQFKSVQTLTETTKFSV 338 >UniRef50_A0KPP9 Ribosomal RNA small subunit methyltransferase C n=3 Tax=Gammaproteobacteria RepID=RSMC_AERHH Length = 342 Score = 84.0 bits (206), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 59/173 (34%), Positives = 88/173 (50%), Gaps = 8/173 (4%) Query: 197 TDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVV 256 T+ T+ VFS + LD+G++ + LP ++G ++D GCG GVIG L +NP KV Sbjct: 172 TELTVLALPGVFSASELDLGSQMLLASLPA-MQGSLLDFGCGAGVIGSVLAKRNPGLKVT 230 Query: 257 FVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTD 316 VD + +A+ SSR + N + E ++ S ++ +F ++ NPPFH T Sbjct: 231 MVDINALALESSRRTLAINGLQG----EVWASDVYSDIQG-KFGRIVSNPPFHAGLK-TF 284 Query: 317 NVAWEMF-HHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVV 368 A E F A L+ G L IVAN L Y L+ F I+++ KF V Sbjct: 285 YAATETFLAKAPDHLQSQGSLTIVANAFLRYQPILETHFKRTEVISSDAKFKV 337 >UniRef50_A8R9R0 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R9R0_9FIRM Length = 198 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 98/197 (49%), Gaps = 13/197 (6%) Query: 182 QLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLE-GE-IVDLGCGN 239 L + + ++++ D++ VFS+ +D G + ++ + E E GE ++DLGCG Sbjct: 10 HLKENRKEITFRFWCFDYSFITDNGVFSKEAIDYGTQVLLKTICEREELGERVLDLGCGY 69 Query: 240 GVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRF 299 G +G+ L P +D +P AV ++ N+ N EA + ++N + + Sbjct: 70 GPVGVVLKKIYPTKAFEMIDVNPRAVQLAKENICRNQLEA----DVHVSNIYEDLHQESY 125 Query: 300 NAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL---DYFHKLKKIFGN 356 + ++ NPP A V + MF A + L++ G+L++V + K+K +FGN Sbjct: 126 SDIITNPPIRAGKA----VIYTMFEEAYQHLELGGKLWVVIRKQQGAPSAVKKIKDVFGN 181 Query: 357 CTTIATNNKFVVLKAVK 373 C I ++ + +LKA+K Sbjct: 182 CEIIKRDSGYYILKAIK 198 >UniRef50_A1B2V8 Methyltransferase small n=8 Tax=Rhodobacterales RepID=A1B2V8_PARDP Length = 344 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 61/199 (30%), Positives = 88/199 (44%), Gaps = 21/199 (10%) Query: 190 VSWKLEGTDWTIHNH---------ANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG 240 W EG W +H VFS G D ++ LPE L IVDLG G G Sbjct: 139 AGWLPEG--WAARDHEAAPGMVTRPGVFSADGPDPASQALAAALPEKLPTRIVDLGAGWG 196 Query: 241 VIGLTLLDKNPQAKVV-FVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRF 299 + +L ++P +++ V+ A+ +R N+ A R F +AL P Sbjct: 197 WLSAEIL-RHPGVELLHLVEADAAALDCARRNI------ADPRARFHWADALDFRLPEPV 249 Query: 300 NAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTT 359 N V+ NPPFH+ A + A L G L++VANRHL Y L++ F + Sbjct: 250 NGVIMNPPFHEGRAADPKLGAGFIRAAAGLLTGAGRLWMVANRHLPYEQALRECFAEVSE 309 Query: 360 IATNNKFVVLKAVKLGRRR 378 + N++F +L A G RR Sbjct: 310 LGGNSRFKILTAS--GARR 326 >UniRef50_B8D5U1 Ribosomal RNA small subunit methyltransferase C (RRNA (Guanine-n2-)-methyltransferase) n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D5U1_DESK1 Length = 200 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 6/170 (3%) Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGC 237 + +P + S+ + G + ++ ++FS + LD G R ++++ G ++D+GC Sbjct: 11 YYKPGQPGERKLFSFTIHGYTFEFISYTSLFSGSSLDDGTRLLLENIMVPRSGVVLDIGC 70 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G GVIG+ + NP +V D +P+AV +RLN N E DR + + VE Sbjct: 71 GYGVIGIVVAKLNPLLEVYMTDVNPLAVKVARLNASRNNVE--DRVVVLQGDRYKPVEGM 128 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF 347 +FNA+ NPP + +++ ARR L +G V R +Y Sbjct: 129 KFNAIYSNPPLSAGMRIVEDIVL----GARRYLTEDGFAQFVLARGGEYL 174 >UniRef50_A6VRG3 Ribosomal RNA small subunit methyltransferase C n=2 Tax=Marinomonas RepID=RSMC_MARMS Length = 353 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 90/186 (48%), Gaps = 12/186 (6%) Query: 191 SWKLE--GTDWTIHNHANVFSRTGLDIGARFFMQHLPEN------LEGEIVDLGCGNGVI 242 +WK E G T+ + VF LD G + L ++ I+D GCG+G+I Sbjct: 163 TWKQEVAGQTLTLCSLPGVFGHGKLDKGTDILLNQLNQHRFMSDVASARILDFGCGDGII 222 Query: 243 GLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAV 302 L L +K A++ +D+S MA+ ++ L N + D + +N L V+ RFN V Sbjct: 223 ALWLHNKT-GARITALDDSVMALKATELTFAAN--QVSDAVTLIASNGLDEVKG-RFNYV 278 Query: 303 LCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIAT 362 + NPPFH ++A F ++ L +NGEL++VAN L Y L G+ T + Sbjct: 279 VTNPPFHSGVNTDYSIAESFFMMVKQHLTLNGELFVVANDFLRYPPILDAALGSHTRLYR 338 Query: 363 NNKFVV 368 + F + Sbjct: 339 DRGFAI 344 >UniRef50_P37872 Uncharacterized protein ybxB n=163 Tax=cellular organisms RepID=YBXB_BACSU Length = 201 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 12/200 (6%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPE-NLEGEIVDLGCG 238 +P + QT S++L D+T + + VFS+ +D G+R + E +EG I+D+GCG Sbjct: 9 KPSVKSNKQTWSFRLRNKDFTFTSDSGVFSKKEVDFGSRLLIDSFEEPEVEGGILDVGCG 68 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 G IGL+L + +D + AV S N E N + + ++ S V+ + Sbjct: 69 YGPIGLSLASDFKDRTIHMIDVNERAVELSNENAEQN---GITNVKIYQSDLFSNVDSAQ 125 Query: 299 -FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL---DYFHKLKKIF 354 F ++L NPP V +F + LK +GEL+IV + KL+++F Sbjct: 126 TFASILTNPPIR----AGKKVVHAIFEKSAEHLKASGELWIVIQKKQGAPSAIEKLEELF 181 Query: 355 GNCTTIATNNKFVVLKAVKL 374 + + + ++KA K+ Sbjct: 182 DEVSVVQKKKGYYIIKAKKV 201 >UniRef50_A0NLD9 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NLD9_9RHOB Length = 352 Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 94/195 (48%), Gaps = 19/195 (9%) Query: 185 DAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGL 244 DAP+ V D + VF+ +D +R LP L+G DLG G G + Sbjct: 161 DAPRPV------LDGAFVSRPGVFAWDRIDPASRLLADQLPATLKGRGADLGAGFGYLTR 214 Query: 245 TLLDKNPQAKVVFVDESPMAVASSR-LNV-ETNMP--EALDRCEFMINNALSGVE-PFRF 299 + +K P KV +D + A R L++ E N+ + L + ++ G+E P+ F Sbjct: 215 AVFEKAP--KVTSMD---LFEAEKRALDLAEQNLAAFKGLRTMNGIWSDVTQGIEGPYDF 269 Query: 300 NAVLCNPPFHQQ-HALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCT 358 V+ NPPFHQ A +V A R L+ GE ++VANRHL Y H L ++F + Sbjct: 270 --VVSNPPFHQAGKADRADVGQGFIRSAARGLRPGGEFFMVANRHLPYEHTLGEVFADVK 327 Query: 359 TIATNNKFVVLKAVK 373 +A + V++AVK Sbjct: 328 QLADEGGYKVIRAVK 342 >UniRef50_D2LVZ2 Methyltransferase small n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LVZ2_BACS4 Length = 200 Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 10/165 (6%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQ--HLPENLEGEIVDLGC 237 +P + + ++ + +T + +FS+TGLD G+R ++ LP N+ G IVD+GC Sbjct: 9 KPTVKSERKKITETITNDQYTFYVDRGIFSKTGLDFGSRLLIESFELP-NVVGTIVDVGC 67 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G G I ++L +NP + +D + AV + NV+ N + M +N L G E Sbjct: 68 GWGPISISLAKRNPNIDFIALDINERAVKLTEENVKLN---GVTNLHVMQSNLLEGHEGK 124 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 342 ++A++ NPP N ++++ A L NGE++IV + Sbjct: 125 YYSAIITNPPIRAGK----NTVFKLYEQAANALVKNGEIWIVIQK 165 >UniRef50_A3DND7 Methyltransferase small n=1 Tax=Staphylothermus marinus F1 RepID=A3DND7_STAMF Length = 193 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 90/182 (49%), Gaps = 8/182 (4%) Query: 190 VSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDK 249 + + G ++ ++FS +D G ++++ EGE++D+GCG GVIGLT+ Sbjct: 16 IPLTIRGVTLEFVSYTSLFSGREVDKGTYLLLKYIDVPDEGEVLDVGCGYGVIGLTIAKL 75 Query: 250 NPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFH 309 NP+ KV VD +P+AV ++ N + N E + + + V+ RFNA+ NPP Sbjct: 76 NPRLKVYMVDINPLAVKITKYNAKLNNLE--KQVVVLQGDVYEPVKNLRFNAIYSNPPLS 133 Query: 310 QQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF-HKLKKIFGNCTTIATNNKFVV 368 + + E ++ LK +G V R +Y K ++I+ + +I +++ Sbjct: 134 SGMYTVEKIVLEAINY----LKPDGFAEFVLARGGEYLVEKARRIYRHVESIRKKG-YII 188 Query: 369 LK 370 LK Sbjct: 189 LK 190 >UniRef50_A6FBK7 16S RNA G1207 methylase RsmC n=1 Tax=Moritella sp. PE36 RepID=A6FBK7_9GAMM Length = 344 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 17/215 (7%) Query: 167 AWKKARLINCTFNEPQLA----DAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQ 222 A +++ L N+P D T + + T+ VFS LD G++ + Sbjct: 139 AARRSSLFVTELNKPVAKFVQDDWVTTFPITVNSIELTVCTLPGVFSHGKLDTGSKILLN 198 Query: 223 HLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDR 282 +L + G ++DLGCG G+IG + + P +KV D S +AV SS+L + N Sbjct: 199 NLHKKPSGRVLDLGCGAGIIGSYIAKRFPASKVEMTDVSALAVKSSQLTLAANELAG--- 255 Query: 283 CEFMINNALSGVEPFRFNAVLCNPPFH----QQHALTDNVAWEMFHHARRCLKINGELYI 338 + +++ S + +F+ ++ NPPFH +A T+ E A + G L + Sbjct: 256 -QAYLSDVYSDISG-KFDYIISNPPFHAGLKTHYASTETFLKE----ANGYINPRGHLVL 309 Query: 339 VANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 VAN L Y ++ FG+C ++KF V A K Sbjct: 310 VANSFLKYPEIIEASFGHCLLQIKSSKFAVYYANK 344 >UniRef50_Q11BC2 Methyltransferase small n=2 Tax=Phyllobacteriaceae RepID=Q11BC2_MESSB Length = 336 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 2/166 (1%) Query: 208 FSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVAS 267 FS D G+RF + +LP ++ G++ D G G + L L+++ + ++ S Sbjct: 173 FSEGLADPGSRFLIDNLPPDISGKVADFAAGWGFLSLRLVERFSIMATDLYEAHLPSLES 232 Query: 268 SRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHAR 327 +R N+ P C + ++ L+ P R++ +L NPPFH+ A + M A Sbjct: 233 ARRNLAEQAPGV--NCRYFWHDLLNEPVPHRYDVILMNPPFHRGRAAEPEIGRGMIGAAA 290 Query: 328 RCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 + L G L++VANR L Y ++ F IA + + VL K Sbjct: 291 KALNPGGRLFLVANRGLPYERIMENAFRQQGEIARDESYKVLWGRK 336 >UniRef50_A1AW50 Methyltransferase small n=5 Tax=Gammaproteobacteria RepID=A1AW50_RUTMC Length = 199 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 10/188 (5%) Query: 189 TVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLD 248 T+ L G D T+ VFS +D G FM+HL + + + +DLGCG G IGL + Sbjct: 19 TIQTNLLGIDLTLKTRWGVFSPRSIDDGTELFMKHLRISNDDKCLDLGCGYGPIGLAVAK 78 Query: 249 KNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR-FNAVLCNPP 307 PQ +V VD+ +AV S +NV+ N ++ + ++NA V F+ +L N P Sbjct: 79 SCPQGEVHMVDKDFVAVELSNINVKLN---HINNAQAYLSNAFLSVNKTNYFDKILSNVP 135 Query: 308 FHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK--LKKIFGNCTTIATNNK 365 + ++ A LK NG++ V+ L +F K K +FGN + K Sbjct: 136 AKVGREQLSIILYD----AYDALKPNGKIMFVSINGLRHFIKDNFKSVFGNYKKLKQGQK 191 Query: 366 FVVLKAVK 373 + + +A+K Sbjct: 192 YTISQAIK 199 >UniRef50_Q5R049 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Idiomarina loihiensis RepID=RSMC_IDILO Length = 334 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 11/191 (5%) Query: 183 LADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVI 242 + D + ++++L + VFSR +D +QH+ + +G +D CG GVI Sbjct: 150 IEDYAKNITYELNQQQESFVTLPGVFSREHIDPATLLLLQHIKDLPKGRGMDFACGAGVI 209 Query: 243 GLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP--EALDRCEFMINNALSGVEPFRFN 300 L + +++ D SP+A+A+S + + N P L + + +NA +F+ Sbjct: 210 AKQL--ASVATELMACDVSPIAIAASEITL-ANEPVKTELRLADGIPDNA------GQFD 260 Query: 301 AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTI 360 ++ NPPFH +A E +AR+ L G +VANR L + ++ +FGNC+ I Sbjct: 261 FIVSNPPFHTGQRTDYEIAREFISNARQHLNKQGVFRVVANRFLPWPEVIESVFGNCSVI 320 Query: 361 ATNNKFVVLKA 371 A + ++ V A Sbjct: 321 ADDGRYRVYHA 331 >UniRef50_D2MPQ8 Methyltransferase small domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MPQ8_9FIRM Length = 197 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 13/197 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL-PENLEGEIVDLGC 237 N L P + + T + VFS+ LD G+ +Q L E+L G+ +D+GC Sbjct: 9 NNEDLLSKPIEYQYTIREKTLTFQSDLGVFSKNKLDFGSHVLIQTLLQEDLSGKGLDMGC 68 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G G IG+++L ++ + ++ VD + A+ R NV N +A +++ ++ Sbjct: 69 GVGAIGISILAEHKKVEMDMVDINNRALRLCRSNVVRNGLKA----NVFLSDGFKNIQE- 123 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH---LDYFHKLKKIF 354 ++ ++ NPP Q + + ++ LK G LYIV + F KL+++F Sbjct: 124 TYDFIVSNPPIRQGKEFL----FRFYEESKSHLKDGGCLYIVIRKQQGAASSFKKLQEVF 179 Query: 355 GNCTTIATNNKFVVLKA 371 GNCT + + + +LK+ Sbjct: 180 GNCTVLEKKSGYWILKS 196 >UniRef50_A3DJK4 Methyltransferase small n=3 Tax=Clostridium thermocellum RepID=A3DJK4_CLOTH Length = 196 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 21/201 (10%) Query: 182 QLADAPQ---TVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCG 238 Q D P T+S+ ++ + A VFS+ +D G+ ++ +P L+G I+D+GCG Sbjct: 7 QNPDTPHDVSTISYTVKDRVIKFNTDAGVFSKRRVDFGSDLLIRSVPP-LDGSILDIGCG 65 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 GVIG++L NP + V +D + AV + N+ N + + ++ S V + Sbjct: 66 YGVIGISLALLNPSSFVTMIDINERAVDLASQNIHLN---GVTNATALTSDGFSNVSD-K 121 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV------ANRHLDYFHKLKK 352 F+A++ NPP V + +F + L G +Y+V AN +++ LK Sbjct: 122 FDAIVSNPPIRAGK----KVIYPIFADSINHLNPGGSIYLVIQKKQGANSAIEF---LKS 174 Query: 353 IFGNCTTIATNNKFVVLKAVK 373 ++GNC I + ++K+ K Sbjct: 175 VYGNCEVINKKAGYWIMKSTK 195 >UniRef50_UPI00016C52FC methyltransferase small n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C52FC Length = 348 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 10/178 (5%) Query: 196 GTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIG-LTLLDKNPQAK 254 G + FS D G+R ++ ++DLGCGNG +G L P A+ Sbjct: 175 GASMEFVSRPGTFSYGRFDAGSRAMLEVAEIRPGDTVLDLGCGNGAVGCLAGAMAGPDAR 234 Query: 255 VVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHAL 314 V F+D S A+A + LN + N + F+ L G+E +F+ +L NPP++ + + Sbjct: 235 VTFIDSSLRAIALAELNAKAN---GVTNTRFVNATRLQGLEEDKFDVILANPPYYAKSEI 291 Query: 315 TDNVAWEMF-HHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 T +F AR LK G Y+V + FG+C+ I VVL Sbjct: 292 T-----RLFIEGARDLLKPGGRYYLVTKMPTAVMPLIFDTFGDCSVIENRGYAVVLSG 344 >UniRef50_Q0VP64 Ribosomal RNA small subunit methyltransferase C n=2 Tax=Alcanivorax RepID=RSMC_ALCBS Length = 325 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 86/182 (47%), Gaps = 10/182 (5%) Query: 194 LEGTDWTIHNHANVFSRTGLDIGARFFMQHLP-ENL--EGEIVDLGCGNGVIGLTLLDKN 250 LE D ++ VFS LD G+ +Q + NL G+++D+GCG GVI + L Sbjct: 149 LEVADQEAVSYPGVFSHGRLDEGSALLLQAMEGHNLGKPGKVIDMGCGAGVISVWLARHG 208 Query: 251 PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ 310 Q V VD S AV +S ++ N + M + S ++ R + V+ NPPFH Sbjct: 209 WQ--VQGVDVSASAVTASTESLARNGLQG----RIMGGDLFSPIQ-GRVDMVVTNPPFHD 261 Query: 311 QHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLK 370 + T ++ + A LK G L++VANR L Y L F + + +F V + Sbjct: 262 RRQRTTDITRRLIAEAPTYLKPGGVLWLVANRELPYVQWLDDAFSHVQVASETTRFRVYR 321 Query: 371 AV 372 AV Sbjct: 322 AV 323 >UniRef50_A4YCT3 Methyltransferase small n=13 Tax=Sulfolobaceae RepID=A4YCT3_METS5 Length = 186 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 10/178 (5%) Query: 194 LEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQA 253 + G + ++ +FS+ LD+G R +++L EG + D+GCG G IG+ + NP+ Sbjct: 12 VNGVPLNLISYPGLFSKKRLDLGTRVLLENLIIPEEGAVADVGCGYGPIGIYVAIINPRL 71 Query: 254 KVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHA 313 V +D +P+AV +SR NVE DR + + ++ LSG E FR A+ NPP + Sbjct: 72 SVYMLDVNPLAVKASRENVERY--GLGDRVKVLKSDLLSGFE-FRVKAIYSNPPLSKGVD 128 Query: 314 LTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK-------LKKIFGNCTTIATNN 364 + + +A + + + LY + F + +K + G +A NN Sbjct: 129 VLERLARDAPERLEKGGWVQMVLYKGEGNAVKIFSEYFPEVKVMKSVKGYSIVLAVNN 186 >UniRef50_B5JVE3 Ribosomal RNA small subunit methyltransferase C n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVE3_9GAMM Length = 353 Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 76/287 (26%), Positives = 125/287 (43%), Gaps = 29/287 (10%) Query: 103 YPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRI-IAGAKARDIHTSTLELFEKVLGP 161 + Q P V++KVPK+ + + L L + +T + G K I K+L Sbjct: 78 FRQPPAAVVLKVPKSRSRTDFLLAQLAHCLPENTAFYLVGHKKEGIEGGA-----KLLKQ 132 Query: 162 TTTTLAWKKARLINCTFNEPQLADAPQTV---SWKL-------EGTDWTIHNHANVFSRT 211 +T+ K+ +C +LA PQ +W E + VFS Sbjct: 133 RASTVD-KRDSARHCQLWRAELA--PQAFDPEAWLQPFELPVPEAAPLQLATLPGVFSLG 189 Query: 212 GLDIGARFFMQHL---PENLEGE--IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVA 266 LD G R + +L P +++ + ++D G G I L L + + VD S +A+ Sbjct: 190 KLDRGTRVLLDNLHSTPLSIKKDAPLLDFAAGAGPIALWLKRRYADLNITLVDVSAIALF 249 Query: 267 SSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHA 326 + +N + N E + C+ + L GV+ + A++ NPPFH +A + + Sbjct: 250 CAWMNAQVNDMEVV--CQ--QADGLQGVDG-EWQAIVSNPPFHTGVETDYRIAEQFIQTS 304 Query: 327 RRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 + LK GEL +VAN HL Y ++ FG C +A + F V +A K Sbjct: 305 WQRLKRGGELRLVANGHLPYAEWIEAQFGQCERLANEDGFHVYRAFK 351 >UniRef50_UPI000051043F putative methyltransferase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000051043F Length = 406 Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 89/354 (25%), Positives = 147/354 (41%), Gaps = 53/354 (14%) Query: 48 VLILNDAFGALSCALAEHKPYSIGDSYISELATRENL--RLNGIDESSVKFLDSTADYPQ 105 +LI++DA G S L+E P + I E T + R + ID+ + D + Sbjct: 74 ILIVDDAQGLQSRLLSEIAPVRTYNDRIDEAHTLAEVADRTSPIDDLAAFASDRNEVW-- 131 Query: 106 QPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAG---AKARDIHTSTLELFEKVLGPT 162 ++ PK L + + A++ V+ T I+ G + +R ++ + +V Sbjct: 132 ----AIVNAPKATHALAETIAAIQSDVS--TVIVIGRSDSMSRAVNKELARGYARV---- 181 Query: 163 TTTLAWKKARLINCT--FNEPQLADAPQ--TVSWKLEGTDWTIHNHANVFSRTGLDIGAR 218 + K R+I + + P L P+ T+ G + H FS D G+ Sbjct: 182 DVSPGVGKHRMIIGSRRLSSPSLPSYPRRGTIDHPATGV-LQVRAHGACFSGIKSDEGST 240 Query: 219 FFMQHLP-----------ENLEGE---IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMA 264 + L E + G I+DLGCGNG + + VD S A Sbjct: 241 ALLTALSSETKPAESQPAEAVTGSPNSILDLGCGNGWLLTAAMQVTAAKNGTGVDVSKAA 300 Query: 265 VASSR-------LNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDN 317 V S+R L V+T + +A D ALSG + +L NPPFHQ + + Sbjct: 301 VTSARETAEANGLEVDTILADATDV------QALSG----GHDLILLNPPFHQGTTIETD 350 Query: 318 VAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 A + A + L G+++ V N HLDY L+++ G +A +KF V+++ Sbjct: 351 TAAGLMATASKLLAPGGQVFTVYNSHLDYRATLERVIGPSEQLARTSKFTVIRS 404 >UniRef50_UPI0000382BBF COG2813: 16S RNA G1207 methylase RsmC n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000382BBF Length = 213 Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 75/170 (44%), Gaps = 10/170 (5%) Query: 206 NVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAV 265 +FS LD G ++HLP L G D GCG G++ +L A + +D AV Sbjct: 52 GIFSWDRLDPGTALLLRHLPA-LSGRGADFGCGLGILARAVLTSPKVASLALIDIDRRAV 110 Query: 266 ASSRLNVETNMPEALDRCEFMINNALSGVEPF--RFNAVLCNPPFHQQHALTDNVAWEMF 323 A +R NV+ R + L G EP + V+ NPPFH A + Sbjct: 111 AMARRNVDEA------RASHHWAD-LRGAEPALSGLDFVVTNPPFHDGGAEDQALGRAFI 163 Query: 324 HHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 A L+ G L++VAN HL Y L+ F + T + T + + +A K Sbjct: 164 ARAASALRPGGTLHLVANAHLPYEAPLRDAFRSVTPVVTEGGYKLFEARK 213 >UniRef50_C6XLQ7 Methyltransferase small n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XLQ7_HIRBI Length = 308 Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 15/257 (5%) Query: 120 LLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFN 179 +L LRAL+ + + +IAG K L+ ++LG T + KK + I Sbjct: 64 VLAHALRALKP--SGEISVIAGKKKG---GQRLKADLELLGCTHIRIDSKKHQKIASCAP 118 Query: 180 EPQLADAPQTVSWKLEGTDWTIH--NHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGC 237 L+ + + D + + +FS D G+ M+HLPE L G DLGC Sbjct: 119 PADLSQVHKAIEENGPQLDEELGLWSQPGIFSWNRPDPGSLLLMEHLPE-LSGRGADLGC 177 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G G++ +L ++ +D A+ + NV +R F+ +A G + Sbjct: 178 GLGLLSHHVLQSEAVKSLLLIDIDRRAIEMAHRNVSD------ERISFLWQDARKGPKDI 231 Query: 298 R-FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGN 356 + ++ NPPFH + A L+ G ++VANRHL Y + + F + Sbjct: 232 TDLDFIVMNPPFHDAGEEDHGLGKAFMARASSMLRKGGICWLVANRHLPYERAINEHFKS 291 Query: 357 CTTIATNNKFVVLKAVK 373 T A ++ F V++A+K Sbjct: 292 FTPKADSHGFKVIEAIK 308 >UniRef50_P57413 Ribosomal RNA small subunit methyltransferase C n=5 Tax=Buchnera aphidicola RepID=RSMC_BUCAI Length = 338 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 9/189 (4%) Query: 183 LADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVI 242 L D +T WK + I + VF +D G++ + G+++D+GCG G + Sbjct: 156 LEDFFKTHLWK----NLIIKSLPGVFGHKKIDSGSKLLASTFSNRITGKVLDIGCGTGFL 211 Query: 243 GLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAV 302 +LL +P A + VD + A+ S+ + +N + + +N S V +F+ + Sbjct: 212 SASLLYFSPDAILTLVDNNMYALKCSQYTLNSNKFNG----KIVYSNLYSNVFK-KFDLI 266 Query: 303 LCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIAT 362 + NPPFH + N+ +M A++ L GEL V +R ++ L K F I Sbjct: 267 ISNPPFHNDLQINFNIIEKMICGAKKYLTKTGELRFVTSRFINCHFLLNKFFQKYYVIKE 326 Query: 363 NNKFVVLKA 371 +++ V +A Sbjct: 327 TSQYKVYQA 335 >UniRef50_B5KCF3 Possible ribosomal RNA small subunit methyltransferase C RsmC n=2 Tax=Octadecabacter antarcticus RepID=B5KCF3_9RHOB Length = 337 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 8/172 (4%) Query: 205 ANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMA 264 A VFS T +DIG+ + HL + L+G++ DLG G G + +L ++ ++ +A Sbjct: 174 AGVFSETKIDIGSSQLVPHL-DALKGDVADLGAGWGFLSREILTHEGVTRLDMIEADKVA 232 Query: 265 VASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFH 324 + + LN R + +AL+ ++ V+ NPPFH A ++ Sbjct: 233 LDCAVLNTNDA------RARPVWTDALT-FSGGPYDVVVSNPPFHTIRAGDPDLGKGFIA 285 Query: 325 HARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGR 376 A R LK G L +VANRHL Y +L F +A F + +A + R Sbjct: 286 TAARILKPRGALLMVANRHLPYEAELDAKFARVEELAGTGAFKIFRATRPKR 337 >UniRef50_Q0FKY0 Methyltransferase, putative n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FKY0_9RHOB Length = 210 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 6/171 (3%) Query: 206 NVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAV 265 VFS D G+ + LPE L ++ DLG G G +G LL ++ + V+ A Sbjct: 46 GVFSADAPDPGSAALLAALPEKLGAQVADLGAGWGGLGAGLLTRDGIRTLHMVEADHAAF 105 Query: 266 ASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHH 325 +R NV R +F +A + P +AV+ NPPFHQ ++ Sbjct: 106 ECARRNVTD------PRVQFHWADATTWTPPELLDAVVMNPPFHQGRRADPSLGQAFITA 159 Query: 326 ARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGR 376 AR+ LK +G+L++VANRHL Y L F N IA +++F +L + R Sbjct: 160 ARKMLKPSGQLWLVANRHLPYETTLAAQFRNSDEIAGDSRFKILHGSRPNR 210 >UniRef50_D2R2V9 Methyltransferase small n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R2V9_9PLAN Length = 336 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/225 (25%), Positives = 91/225 (40%), Gaps = 16/225 (7%) Query: 147 IHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTD--WTIHNH 204 +H LELF KV T L K+ + T P + D + Sbjct: 119 LHEQLLELFPKV-----TRLPQKRGVVYRATKQAPLKKHRSFVAQFPCRDGDHLLQLQTR 173 Query: 205 ANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMA 264 VF+ +D GAR + + ++D+GCG GV+GL + + P A V+ +D A Sbjct: 174 PGVFNHRSVDAGARALLSAVEVRAGESVLDIGCGCGVVGLVICKRLPTATVLAIDSHSRA 233 Query: 265 VASSRLNVETN-MPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMF 323 + ++ + E N +P+ R ++ + V F+ V NPP+ +A Sbjct: 234 IECTQASAERNELPQLTAR----LDPSHKSVPDASFDVVAMNPPYFSNF----RIAELFL 285 Query: 324 HHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVV 368 A R LK G LY V Y +LK+ + N + N VV Sbjct: 286 QTATRALKPGGRLYSVTKTPEWYLERLKEGWTNVEAVPVKNYIVV 330 >UniRef50_Q0C459 Putative methyltransferase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C459_HYPNA Length = 346 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 15/215 (6%) Query: 167 AWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPE 226 A K+A +N E +A Q ++E + W+ +FS +D G+ +PE Sbjct: 144 AVKRADEMNTELVEDWIA---QDTPREIEPSLWS---RPGLFSWDRIDPGSELLADSIPE 197 Query: 227 NLEGEIVDLGCGNGVIGLTLL---DKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRC 283 +G +D+G GNG + +L DK + +V D + + E M RC Sbjct: 198 YTKGIGIDIGAGNGFLSREVLNHCDKVERMDLVEADYRAL------ICQEQTMAPFGARC 251 Query: 284 EFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 343 +AL + ++ L NPPFH A + A LK +G L++VANRH Sbjct: 252 TIKWADALKDLPRATYDFALMNPPFHTGRADNSELGRAFIRAAAATLKPSGTLWLVANRH 311 Query: 344 LDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR 378 L Y +L F + + + ++KA K R++ Sbjct: 312 LPYEGELSACFRGVEMLDDEDGYKIIKAEKPKRQK 346 >UniRef50_A5WBH5 Methyltransferase small n=5 Tax=Gammaproteobacteria RepID=A5WBH5_PSYWF Length = 202 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 16/173 (9%) Query: 207 VFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVA 266 +FS LD G+ + H+ + + +DLGCG GV+G+T + PQ + +D+ MAV Sbjct: 39 IFSPEKLDAGSLMLLDHIDFQSDDDSIDLGCGYGVLGMTAARECPQGQHTLIDKDFMAVE 98 Query: 267 SSRLNVETNMPEALDRCEFMINNALSGVEPFR-FNAVLCNPPF---HQQHALTDNVAWEM 322 +R N + N L + ++N + V+P + F+ V+ N P +QH L Sbjct: 99 YARRNCQNN---GLSNVDVHLSNGFNHVDPNKDFSLVMSNLPAKVGKEQHYL-------Y 148 Query: 323 FHHARRCLKINGELYIVANRHLDYFHK--LKKIFGNCTTIATNNKFVVLKAVK 373 A ++ G Y+V L F K ++FGN + + + +A+K Sbjct: 149 LLDAYSKMRTGGRFYVVTINGLRQFMKRAFTEVFGNADKVKQGKTYTITRAIK 201 >UniRef50_Q02YD3 16S RNA G1207 methylase RsmC n=110 Tax=Bacilli RepID=Q02YD3_LACLS Length = 227 Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 14/190 (7%) Query: 188 QTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQ-HLPENLEGEIVDLGCGNGVIGLTL 246 QT++ L G VFS+ G+D G+R ++ + PE + ++D+GCG G +GLTL Sbjct: 48 QTLTVDLLGLSMRFKTDRGVFSKNGIDYGSRVLLEDYQPEGAK-TLLDVGCGYGTLGLTL 106 Query: 247 LDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNP 306 K V VD + A+ R N N A+ E ++N V +++A++ NP Sbjct: 107 A-KKFDLSVTMVDVNSRALDLCRQNAIDN---AVSNTEIELSNIYEAVSE-KYDAIISNP 161 Query: 307 PFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL---DYFHKLKKIFGNCTTIATN 363 P V E+ A L G L IV + K++++FGNC +A + Sbjct: 162 PIRAGK----EVVHEILTGAFDYLNDGGHLTIVIQKKQGAPSAQRKMEEVFGNCQLVARD 217 Query: 364 NKFVVLKAVK 373 + +L++ K Sbjct: 218 KGYFILRSYK 227 >UniRef50_Q72L94 Ribosomal RNA small subunit methyltransferase C n=6 Tax=Thermaceae RepID=Q72L94_THET2 Length = 375 Score = 70.9 bits (172), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 12/202 (5%) Query: 181 PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL-----PENLEG-EIVD 234 P L + S ++ G ++T H+ VFS +D + ++ L PE + G +++D Sbjct: 180 PPLPSLWRAFSARILGAEYTFHHLPGVFSAGKVDPASLLLLEALQERLGPEGVRGRQVLD 239 Query: 235 LGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV 294 LG G G + L L A+VV V++ +V S + +E N +A ++ AL+ Sbjct: 240 LGAGYGALTLPLARMG--AEVVGVEDDLASVLSLQKGLEANALKA-QALHSDVDEALT-- 294 Query: 295 EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIF 354 E RF+ ++ NPPFH A+ +VA A L+ G ++V+N L Y L++ F Sbjct: 295 EEARFDIIVTNPPFHVGGAVILDVAQAFVDVAAARLRPGGVFFLVSNPFLKYEPLLEEKF 354 Query: 355 GNCTTIATNNKFVVLKAVKLGR 376 G T+ ++ VL A K GR Sbjct: 355 GAFQTLKV-AEYKVLFAEKRGR 375 >UniRef50_Q58292 Protein MJ0882 n=11 Tax=Methanococcales RepID=Y882_METJA Length = 197 Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 14/200 (7%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGN 239 +P + V L G + VFS +D G + ++++ + + +I+DLGCG Sbjct: 7 KPTTKSDVKIVEDILRGKKLKFKTDSGVFSYGKVDKGTKILVENVVVDKDDDILDLGCGY 66 Query: 240 GVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRF 299 GVIG+ L D+ D + A+ ++ N++ N + D + ++ V+ ++ Sbjct: 67 GVIGIALADEVKST--TMADINRRAIKLAKENIKLNNLDNYD-IRVVHSDLYENVKDRKY 123 Query: 300 NAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV-----ANRHLDYFHKLKKIF 354 N ++ NPP V + + LK NGE+++V + L + +K +F Sbjct: 124 NKIITNPPIRAGK----EVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKY--MKDVF 177 Query: 355 GNCTTIATNNKFVVLKAVKL 374 GN T+ + VLK+ KL Sbjct: 178 GNVETVTIKGGYRVLKSKKL 197 >UniRef50_C1ZEP1 16S RNA G1207 methylase RsmC n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZEP1_PLALI Length = 390 Score = 70.5 bits (171), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 88/360 (24%), Positives = 153/360 (42%), Gaps = 40/360 (11%) Query: 31 ADEYLLQQLDDTEIRGPVLILNDAFGA-LSCALAEHKPYSIGDSYISELATRENLRLNGI 89 A++ ++ L D ++G ++ N + A + ALA KP S + ++ R+ L Sbjct: 23 AEQLMVDALAD--VQGERILCNSSGRAQFAFALAIAKPQSQVTCWFLDVHLRDQAALAPA 80 Query: 90 DESSVKFLDSTADYPQ-QPGVVLIKVPKT-LALLEQQL--RALRKVVTSDTRIIAGAKAR 145 + L D+P + + + +PKT A L + L +A ++V T +IA R Sbjct: 81 GVPANLQLVCEPDFPGIEYQTICLVLPKTGEAELTRDLLQQACVRLVEGGT-LIATTDMR 139 Query: 146 D---IHTSTLELFEKVLG-PTTTTLAW--------KKARLINCTFNEPQLADAPQTVSWK 193 D +HT F KV PT + + KK + +C F D + + K Sbjct: 140 DDQWLHTEIQRFFPKVTRRPTRKGVTYLAIKTESPKKLKNHDCEF---MFRDGERLIRMK 196 Query: 194 LEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQA 253 + VF+ LD+GAR + + +G+IVDLGCG+G + + ++P+ Sbjct: 197 ---------SRPGVFAHRKLDVGARTLISVIEPMEQGQIVDLGCGSGGVAVAAALRHPEL 247 Query: 254 KVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHA 313 V+ VD +P A+ ++ + N R + ++ +E + V NPP+ + Sbjct: 248 DVLAVDSNPRAIECTQWAAKEN---GTSRVQTRLDATGKSLESNSVDVVYANPPYFSNY- 303 Query: 314 LTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 +A A R L G +YIV Y L +F N T+ + ++KA K Sbjct: 304 ---KIAGIFIETAFRILIPGGRIYIVTKAPAWYVESLPLLFENVTSDLIRG-YSIVKATK 359 >UniRef50_C0XSD5 Possible methyltransferase small n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XSD5_9CORY Length = 318 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 71/281 (25%), Positives = 116/281 (41%), Gaps = 33/281 (11%) Query: 95 KFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAK----ARDIHTS 150 + LD+ V + ++PK+L L+ R++ ++ GA AR ++T Sbjct: 65 RRLDAYLAGSSGSAVAVGEMPKSLGRLDYLARSIAGAGFDQVTMVLGANNKHLARSMNTV 124 Query: 151 TLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSR 210 E F V +L K R + +A P+ V++ + + VFS Sbjct: 125 LGESFTDV----AASLGRGKFRCL--------VASGPKPVTYT-PASSRELVAIGGVFSG 171 Query: 211 TGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRL 270 T D+G LP +L G +DLGCGNG + L Q V+ D AV S+R Sbjct: 172 TKPDLGGELLRASLPASL-GRYLDLGCGNGSVSRGL-----QGAVMATDSDADAVLSARA 225 Query: 271 NVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCL 330 ++A S + F+ + NPPFH + + + A R L Sbjct: 226 I----------GLHVTWDDAGSALADSSFDTIALNPPFHDGTTVDATLVQHLLDAAARLL 275 Query: 331 KINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 G LY+V N HL Y ++++ F +A + ++ VL+A Sbjct: 276 APGGSLYLVHNSHLRYRAEVERRFDAVEEVARDARYTVLRA 316 >UniRef50_Q28KG1 Methyltransferase small n=1 Tax=Jannaschia sp. CCS1 RepID=Q28KG1_JANSC Length = 336 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 12/191 (6%) Query: 187 PQTVSWKLEGTDWTIHNHANV---FSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIG 243 PQ V W + + H + V FS G D G+ + +PE L+G + D G G G I Sbjct: 143 PQVVDW-IAAPEEGAHGYMTVPGGFSVEGPDRGSEILVALVPE-LKGRVADFGAGWGYIA 200 Query: 244 LTLLDKNPQAKVVFVDESPMAV-ASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAV 302 +L + + + E+ A+ +++ N++ R F + +++A+ Sbjct: 201 GEILAEQEGIETFDLIEADHAMLEAAQHNIDDP------RASFHWADVTRFTPEAQYDAI 254 Query: 303 LCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIAT 362 +CNPPFH ++ A R L G ++VANRHL Y LK FG + + Sbjct: 255 VCNPPFHTGRRADPSLGRAFIQAASRHLTARGRFFMVANRHLPYEDTLKTCFGTGSMLGE 314 Query: 363 NNKFVVLKAVK 373 + + +A K Sbjct: 315 LEGYKIYEAGK 325 >UniRef50_A5IQ95 16S rRNA m(2)G 1207 methyltransferase n=53 Tax=Staphylococcus RepID=A5IQ95_STAA9 Length = 202 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 14/201 (6%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGA----RFFMQHLPENLEGEIVDL 235 +P + Q + ++L + VFS+ +D G+ + F++ P I D+ Sbjct: 8 DPSVISNEQRIQYQLNHHKIDLITDNGVFSKDKVDYGSDVLVQTFLKAHPPGPSKRIADV 67 Query: 236 GCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE 295 GCG G IGL + +P + +D + A+A N + N +D ++ALS VE Sbjct: 68 GCGYGPIGLMIAKVSPHHSITMLDVNHRALALVEKNKKLN---GIDNVIVKESDALSAVE 124 Query: 296 PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY---FHKLKK 352 F+ +L NPP +F A L NGEL++V + ++ + Sbjct: 125 DKSFDFILTNPPIRA----GKETVHRIFEQALHRLDSNGELFVVIQKKQGMPSAKKRMNE 180 Query: 353 IFGNCTTIATNNKFVVLKAVK 373 +FGN + + + +L+++K Sbjct: 181 LFGNVEVVNKDKGYYILRSIK 201 >UniRef50_Q0FA32 Methyltransferase, putative n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FA32_9RHOB Length = 335 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 8/170 (4%) Query: 205 ANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAK-VVFVDESPM 263 A +FS +D + ++ LP++L G DLG G G + LL N + K + V+ Sbjct: 166 AGIFSANHIDKASSLLLKCLPKHLGGIGADLGAGWGYLSNELLKTNDKIKSICLVEADWN 225 Query: 264 AVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMF 323 A+ ++LN+ + R +F +A + + +++ ++ NPPFHQ ++ Sbjct: 226 ALHCAKLNINDS------RAKFEWTDA-TQHKNVKYDFIIMNPPFHQTRKAEPDIGKSFI 278 Query: 324 HHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 A L G+L++VANR L Y L F + +I +F V+ A++ Sbjct: 279 IQASELLTPKGQLWMVANRQLAYETTLDTCFTSVNSITETPQFKVINALR 328 >UniRef50_A4BC00 16S RNA G1207 methylase RsmC n=1 Tax=Reinekea blandensis MED297 RepID=A4BC00_9GAMM Length = 319 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 7/192 (3%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCG 238 ++P + T SW+ D T + VFS LD G + LPE GE+++ G G Sbjct: 131 DQPSAEEQWTTFSWQ----DLTGYALPGVFSAGRLDKGTEVLLSTLPE-FHGELLEFGAG 185 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 +G++ L + +V V+ +AV S+ V+ N + ++ ++ L + R Sbjct: 186 SGILTSALAKQPSVRRVDAVEIDLLAVRSANRTVQEN--QLTNKAFIHWSDGLESLPAQR 243 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCT 358 ++A++ NPPFHQ ++F A LK G+ V N L+Y L F Sbjct: 244 YDALVSNPPFHQGLRTAYAATEKLFAQAHLWLKPGGQFIWVINDFLNYQMHLDSAFSAPE 303 Query: 359 TIATNNKFVVLK 370 T+ F V K Sbjct: 304 TLVRERGFKVQK 315 >UniRef50_C1A9K7 rRNA methyltransferase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9K7_GEMAT Length = 447 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 65/143 (45%), Gaps = 4/143 (2%) Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 ++DLGCG G +G+ ++ V+ ++ + R E +P+ + ++ Sbjct: 308 RVLDLGCGAGALGVVASIRSGVPAVLADADADAVRGAQRTAREAGVPD----VRVLASDV 363 Query: 291 LSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKL 350 S VE F+ V+ NPPFH ++ V A R L G LYIVANR L Y + Sbjct: 364 ASAVEDQAFDVVVSNPPFHVGKSIDLTVPRAFIDDAWRTLAPGGRLYIVANRTLPYERLI 423 Query: 351 KKIFGNCTTIATNNKFVVLKAVK 373 FG T +F VL AV+ Sbjct: 424 DARFGEVRTAHDGRRFKVLGAVR 446 >UniRef50_C5NY36 Methyltransferase small n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NY36_9BACL Length = 198 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 11/199 (5%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLE-GEIVDLGC 237 N P + ++ + + + VFS+ +D G + ++ N E ++VD+GC Sbjct: 7 NNPTTESREKIINSTIANENLKFYTDNGVFSKESVDFGTKTMLESFTTNKENAKVVDIGC 66 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G GVI + L K P K VD + + S+ N+E N E + E + +++ V Sbjct: 67 GYGVISIFLAKKYPTYKFTMVDVNNRVLELSKKNIELNKIE--NEVEVLESSSFDNVVG- 123 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF---HKLKKIF 354 F+ VL NPP + + + + H L GEL++V + L+ F Sbjct: 124 TFDIVLTNPPIRAGKKIVHKIMTDSYEH----LNAQGELWVVIQKKQGMASCKKLLEDTF 179 Query: 355 GNCTTIATNNKFVVLKAVK 373 + N + +LKAVK Sbjct: 180 SMVEVVTKNKGYYILKAVK 198 >UniRef50_A3K8H8 Methyltransferase, putative n=5 Tax=Rhodobacteraceae RepID=A3K8H8_9RHOB Length = 335 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 6/154 (3%) Query: 229 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEAL----DRCE 284 +G++ DLG G G + +L + + V+ A+ +RLNV P A+ D Sbjct: 183 KGDVADLGAGWGWLSRGILRHHGVKTLHLVETEKTALDCARLNVTD--PRAVFHWADATA 240 Query: 285 FMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL 344 + P + +AV+ NPPFH + A R L +G+L++VANRHL Sbjct: 241 WTPPQPAGAHAPRKLDAVVMNPPFHTGRRADPALGRAFIEAAARVLAPHGQLWMVANRHL 300 Query: 345 DYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR 378 Y L +F + I +++F +L A ++ R R Sbjct: 301 PYETALIALFRDVAEIGGDSRFKLLHAARVIRAR 334 >UniRef50_Q2W4E3 16S RNA G1207 methylase RsmC n=3 Tax=Magnetospirillum RepID=Q2W4E3_MAGSA Length = 314 Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 5/169 (2%) Query: 204 HANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQA-KVVFVDESP 262 A FS +D G+R + LPE L G DLG G G + +L + P+ + + Sbjct: 144 RAGCFSSDHVDKGSRLLLDCLPEGLAGRGADLGAGWGYLSAEILRRFPEVTDIDLFEAEA 203 Query: 263 MAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 322 +A+ +R N+ + A + + L EP+ + ++ NPPFH+ + Sbjct: 204 LALEDARSNLGGSEKAAFHWLD--VGAGLPKCEPYDW--IVSNPPFHEGRKADPAIGQGF 259 Query: 323 FHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 A + ++ G+ +VANR L Y +L++ F T + + F V A Sbjct: 260 ITAAWKAIRRRGKFILVANRSLPYEAELRRRFREVTLLREADGFKVYLA 308 >UniRef50_B8I4M1 Methyltransferase small n=2 Tax=Bacteria RepID=B8I4M1_CLOCE Length = 196 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 9/185 (4%) Query: 186 APQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE-IVDLGCGNGVIGL 244 A + + +++G VFS +D G M L + EG+ ++DLGCG GV+G+ Sbjct: 3 AIRLIETEIKGIKMKFKTSGKVFSPQNIDRGT-LAMLSLADFKEGDKVLDLGCGYGVVGI 61 Query: 245 TLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLC 304 V+ D A+ +L +E + ++D + + ++ ++ F+ +L Sbjct: 62 LASKIVGPENVIMTDVDENAI---KLAIENALINSVDSIKILKSDGFKELKESGFSIILS 118 Query: 305 NPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNN 364 NPP+H + VA E L + G + +V R Y +KL IFG C + Sbjct: 119 NPPYHTDFS----VAKEFVEKGFNRLIVGGRMIMVTKRKDWYKNKLTSIFGGCKACEIDG 174 Query: 365 KFVVL 369 FV + Sbjct: 175 YFVFV 179 >UniRef50_A3JNU9 Methyltransferase, putative n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JNU9_9RHOB Length = 329 Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 8/168 (4%) Query: 206 NVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAV 265 VFS LD G+ + LP L G D+G G G + L K+ ++ A+ Sbjct: 166 GVFSAEKLDKGSLALIAALPP-LAGHGADIGAGWGFLSRAALGHEKVTKLDLIEAEIAAL 224 Query: 266 ASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHH 325 ++R+N+ +R F + F ++ ++ NPPFH + ++ Sbjct: 225 DAARVNIID------ERANFEWADVTKTSGRF-YDFIIANPPFHTERTANTDLGVAFLTT 277 Query: 326 ARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 A R LK G+ Y VANRHL Y L ++F N I + F V +A + Sbjct: 278 AARNLKPKGQFYCVANRHLPYEVVLNELFRNVAEIGGTSAFKVFQAAQ 325 >UniRef50_Q89AI2 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=RSMC_BUCBP Length = 326 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 7/167 (4%) Query: 207 VFSRTGLDIGARFFMQHLPENLEGE-IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAV 265 VFS +D G + M +NL + ++D+GCG+GV+ L P+ K+ +D + A+ Sbjct: 159 VFSYNNIDHGTKLLMSTCTKNLRWKTVLDIGCGSGVLSTYLATIFPEIKLTLIDSNIAAL 218 Query: 266 ASSRLNVETNMPEALDRC-EFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFH 324 SS+L + +N + C E +N S V F+ ++ NPP H ++ L ++ + Sbjct: 219 ESSKLTLTSN-----NVCGEIFPSNIYSNVHYQNFDLIISNPPLHVENKLNFSIIDNIIK 273 Query: 325 HARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 ++ + L GE+ IV +++ F T + T++ + V +A Sbjct: 274 NSVKYLSNKGEIRIVTLKNVPCHKSFTLYFKKYTILKTSSHYKVYQA 320 >UniRef50_Q3BNY2 Ribosomal RNA small subunit methyltransferase C n=16 Tax=Proteobacteria RepID=Q3BNY2_XANC5 Length = 392 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 11/191 (5%) Query: 185 DAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGL 244 DAP+ + D + VF+ +D + ++HLP L G DLG G G + Sbjct: 205 DAPRKI------LDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSA 258 Query: 245 TLLDKNPQAKVVFVDES-PMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVL 303 +L + P+ + + E+ A+ +R N++ A + + + +G+ +++ ++ Sbjct: 259 EVLARCPKVTALDLYEAEARALTLARRNLQDIAHPA--QLHYHWRDVTAGLV-AQYDFIV 315 Query: 304 CNPPFH-QQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIAT 362 NPPFH A ++ A + L+ G+L +VANRHL Y L FG A Sbjct: 316 SNPPFHTPSRADRPDIGQRFIAVAAQALRPGGQLILVANRHLPYEQVLNDSFGQVRVAAE 375 Query: 363 NNKFVVLKAVK 373 + F ++ A++ Sbjct: 376 RDGFKLIAAIR 386 >UniRef50_B0UBH2 Methyltransferase small n=17 Tax=Alphaproteobacteria RepID=B0UBH2_METS4 Length = 312 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 80/275 (29%), Positives = 115/275 (41%), Gaps = 27/275 (9%) Query: 109 VVLIKVPKTL---ALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTT 165 VV++ P T A+L Q LR LR R+ A A +D S L G Sbjct: 55 VVILAPPGTAERRAVLAQGLRVLRP----SGRLTALAP-KDRGGSRLGREMAGFGCAVAE 109 Query: 166 LAWKKARLINCTFNEPQLADAPQTVSWKL-EGT-----DWTIHNHANVFSRTGLDIGARF 219 A + R+ C P AP + L EG D + +FS +D G Sbjct: 110 TAKRHHRI--CRAERPA---APVGIEAALAEGAPRYLPDLGLWTQPGIFSWNRIDPGTAL 164 Query: 220 FMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEA 279 + LP L+G DLGCG GVI +L + D AVA++R NVE P A Sbjct: 165 LLDTLPP-LKGRGADLGCGLGVIARAVLASPAVTALTLADIDRRAVAAARRNVED--PRA 221 Query: 280 -LDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYI 338 + + +AL G R + V+ NPPFH + + + A L+ G L++ Sbjct: 222 HVAWADARRADALPG----RLDFVVTNPPFHLKGSEDQGLGQAFIRRAAEVLRPGGALWL 277 Query: 339 VANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 AN HL Y L + F T A+ + + V +A++ Sbjct: 278 TANLHLPYEAVLAEAFRTVTARASGHGYKVYEAIR 312 >UniRef50_C8NTY6 Methyltransferase small domain protein n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NTY6_9CORY Length = 324 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 64/269 (23%), Positives = 112/269 (41%), Gaps = 29/269 (10%) Query: 109 VVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAW 168 V + ++PK+L L+ R+L R++ G + + S ++ + Sbjct: 80 VAVGEMPKSLGRLDYLARSLASAGVG--RVVFGGNNKHLARSMNDVLASSFAEVAASRGR 137 Query: 169 KKARLINCTFNEPQLADAPQTVSWK-LEGTDWTIHNHANVFSRTGLDIGARFFMQHLPEN 227 K R + +A P+ V++ +E +T VFS D G L ++ Sbjct: 138 GKFRCL--------VASGPRDVAYSPVEAGGFTAVG--GVFSGAREDYGGALLTSTLLDS 187 Query: 228 LE--GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSR-LNVETNMPEALDRCE 284 G+++D+GCGNG + LL+ D AV S+R L +E Sbjct: 188 RAELGKVLDVGCGNGSVVKRLLEAG--VDATATDADADAVLSTRALGIEATW-------- 237 Query: 285 FMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL 344 ++A S E F+ V NPPFH + + + + + R L G+L++V N HL Sbjct: 238 ---DDAGSQWEAGTFDTVALNPPFHDRAGVDATLVQHLLDASVRLLAPGGQLFMVHNSHL 294 Query: 345 DYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 Y +++ + +A N KF VL+ + Sbjct: 295 RYRGEVEARLKSVEQVARNQKFTVLRGTR 323 >UniRef50_A6WWW0 Methyltransferase small n=21 Tax=Brucellaceae RepID=A6WWW0_OCHA4 Length = 340 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 9/178 (5%) Query: 200 TIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVD 259 +FS +D G+ + H+ + G + DLG G G + L + K + + Sbjct: 168 VFRTEPGMFSHGVIDKGSALLVPHMEKIFFGNVADLGAGWGYLAAQCLKFADRIKSIDLY 227 Query: 260 ESPM-AVASSRLNVE---TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALT 315 E+ A+ ++R N+E ++P + + + + + ++G+ ++ V+ NPPFH+ Sbjct: 228 EADYEALEAARGNLERLGASVPISFNWFD-VTSEKMAGI----YDTVIMNPPFHEGRVTD 282 Query: 316 DNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 ++ A LK G L +VANR L Y LK +F N T + N F + A K Sbjct: 283 VSLGQAFIAAAASRLKPGGRLLMVANRQLPYETTLKGLFKNVTLLEEANGFKIFDAKK 340 >UniRef50_Q1IXW7 rRNA (Guanine-N(2)-)-methyltransferase n=3 Tax=Deinococcus RepID=Q1IXW7_DEIGD Length = 407 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 7/145 (4%) Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 ++DLGCG G++G + A+V VD +V S++ + N + +++ Sbjct: 270 RVLDLGCGTGLMGAWAARRG--AQVTLVDGDLQSVRSAQATLAANGLSG----DVFLSDV 323 Query: 291 LSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKL 350 + + F+ +L NPPFH + +VA E A R L G LY+VAN L Y L Sbjct: 324 DAALGERTFDVILTNPPFHVGRGVVLDVAREFIAAAGRRLNPGGTLYLVANEPLPYETPL 383 Query: 351 KKIFGNCTTIATNNKFVVLKAVKLG 375 + + G + F VL A + G Sbjct: 384 RSL-GELRALRREGDFKVLAATRAG 407 >UniRef50_A8F736 Methyltransferase small n=1 Tax=Thermotoga lettingae TMO RepID=A8F736_THELT Length = 210 Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 19/194 (9%) Query: 188 QTVSWKLE-GTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTL 246 +T + KL+ G + + VFS +D + ++H + + +++DLGCG GV+G+ + Sbjct: 26 RTANLKLKNGRIYKFKTPSGVFSFGKVDKATKILVEHAIVHGK-KVLDLGCGYGVVGIVV 84 Query: 247 LDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF---RFNAVL 303 + P ++V D + AV +R+N + N + +C S +P+ +F+ +L Sbjct: 85 KGEYPDSEVYMSDVNERAVEFARINAKDNNVDVTIKCG-------SFYDPWQEEKFDVIL 137 Query: 304 CNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA--NRHLDYFHK-LKKIFGNCTTI 360 NPP A + +E H L G L +VA N+ Y K +++ FGN I Sbjct: 138 LNPPMAAGKATVLRMIYESIKH----LNEKGSLQVVAYHNKGGSYIKKAMQETFGNVEDI 193 Query: 361 ATNNKFVVLKAVKL 374 + K+V+L Sbjct: 194 CKEGGIRIYKSVRL 207 >UniRef50_C2KPF6 Possible 16S rRNA methyltransferase n=4 Tax=Actinomycetales RepID=C2KPF6_9ACTO Length = 282 Score = 63.9 bits (154), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 12/195 (6%) Query: 181 PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEI-VDLGCGN 239 P A P+ + +L G + IH + VFS GLD G ++ +P+ EG + VD+GCG Sbjct: 89 PSAAARPRELEVELAGMTFRIHTDSGVFSGDGLDKGTAVLLRKVPKLPEGGVFVDVGCGW 148 Query: 240 GVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINN-ALSGVEPFR 298 G + L + + P A+VV VD + A+ + N N L E + AL+ + Sbjct: 149 GPLSLVMARQRPAARVVAVDVNARALDLTAKNAREN---GLGNLEVLAETAALAQLADGS 205 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL--DYFHKLKKIFG- 355 + + NPP + + M+ R L+ G Y+V R+L D F + G Sbjct: 206 VDVIWSNPPVR----IGKDALHAMWTAWRVKLRPGGVAYLVMGRNLGADTFAAWARDSGW 261 Query: 356 NCTTIATNNKFVVLK 370 +A++ F VL+ Sbjct: 262 ETERLASSKGFRVLQ 276 >UniRef50_A0YF73 16S ribosomal RNA m2G1207 methyltransferase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YF73_9GAMM Length = 350 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 59/231 (25%), Positives = 95/231 (41%), Gaps = 30/231 (12%) Query: 153 ELFEKVLGPTTTTLAWKKARLINCTFNEPQL---ADAPQTVSWKLEGTDWTIHNHANVFS 209 E+ EK G T T+A I C + + D P S G ++ +F Sbjct: 133 EMGEKQRGNKTATMA-----AILCRGGDGERLDDKDYPSQSSIAFAGINFI--TKPGIFG 185 Query: 210 RTGLDIGARFF----------MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVD 259 +D G++ M H+PE +VDLGCG G I + + + A + D Sbjct: 186 WNKIDQGSQLLIDQLADEVKLMAHVPET----VVDLGCGYGFISV-MASRIVNATFIASD 240 Query: 260 ESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVA 319 + A+ + N + ++++ + +E + + VLCNPPFHQ + D + Sbjct: 241 NNMAAINACTENFRQHGVSG----SVVVDDCAADIE-LKADMVLCNPPFHQGFEVEDQLT 295 Query: 320 WEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLK 370 + + R L G V NR + K KK F TIA N +F V++ Sbjct: 296 EKFLRASGRLLNRKGVALFVVNRFIPLERKAKKWFKLVETIADNGRFKVVR 346 >UniRef50_A9KTA1 Methyltransferase small n=3 Tax=Firmicutes RepID=A9KTA1_CLOPH Length = 207 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 6/163 (3%) Query: 207 VFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVA 266 VFS + D G + ++ + ++DLGCG G++G+ A+V D S AV Sbjct: 19 VFSPSFADRGTLAMLSYVTFDNSDTLLDLGCGYGLVGIYASKVLSPARVTMCDISEKAVE 78 Query: 267 SSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHA 326 S+ N E N + LD + ++ + ++ +L NPP+H ++ + E + Sbjct: 79 LSKKNAEYN--QVLDELTILQSDGFRNLPVDEYSLILSNPPYHVDFSVPKHFIEESY--- 133 Query: 327 RRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVL 369 R L + G+LY+V R Y +K+ +FG + ++ + Sbjct: 134 -RRLIMGGKLYMVTKRKDWYKNKIISVFGGVEIHEKDGYYIFI 175 >UniRef50_B5GW92 Methyltransferase n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GW92_STRCL Length = 209 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 18/170 (10%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQH--LPENLEGEIVDLGC 237 +P +A P V +LE + + VFS + LD G + +++ LP N G+I+DLGC Sbjct: 13 DPGVASRPGQVRVELEDVQLDLRTDSGVFSHSRLDPGTKVLLENAPLPRN-RGDILDLGC 71 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G G I LT + + +V VD + A+ R N ET + C + + + E Sbjct: 72 GYGPIALTFATRRKRLRVWAVDVNERALGLVRENAETARLGNVTAC---LPDEVP--EDV 126 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKI---NGELYIVANRHL 344 RF + NPP A EM R L + G Y+V +HL Sbjct: 127 RFGTIYSNPPIRIGKA-------EMHAMLLRWLPLLQDGGTAYLVVQKHL 169 >UniRef50_Q8TXG5 16S rRNA G1207 methylase n=1 Tax=Methanopyrus kandleri RepID=Q8TXG5_METKA Length = 199 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 13/184 (7%) Query: 193 KLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEG--EIVDLGCGNGVIGLTLLDKN 250 ++ G ++ VFS +D G + +++ +LEG ++DLGCG GV+G+ + Sbjct: 22 RIRGREYRFLTAPGVFSWRRIDPGTQLLAENM--DLEGVHSVLDLGCGYGVLGIVAAKEL 79 Query: 251 PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ 310 + VV D + A+ + N N E D E + VE F+ ++ NPP + Sbjct: 80 GEGHVVMTDVNRRAIWLANENRRLNDVE--DITEVREGSLYDPVEDEEFDRIVSNPPIRE 137 Query: 311 QHALTDNVAWEMFHHARRCLKINGELYIVANRHLD---YFHKLKKIFGNCTTIATNNKFV 367 L + E +H L +GEL++V R + +++ +FG+ A + Sbjct: 138 GLDLVLRIVREAPNH----LTEDGELWLVVRRKMGSKRILSEMRTVFGSAEVAARGGGYW 193 Query: 368 VLKA 371 VL+A Sbjct: 194 VLRA 197 >UniRef50_C7LF42 Methyltransferase n=17 Tax=Brucella RepID=C7LF42_BRUMC Length = 340 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 81/172 (47%), Gaps = 9/172 (5%) Query: 206 NVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPM-A 264 +FS +D G+ +H+ + + G + DLG G G + L + K + + E+ A Sbjct: 174 GMFSHGAIDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADYEA 233 Query: 265 VASSRLNVE---TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWE 321 + ++R N+E ++P + + + + + ++G+ ++ V+ NPPFH+ ++ Sbjct: 234 LEAARGNLERLGASIPISFNWFD-VTSEKIAGI----YDTVIMNPPFHEGRVTDVSLGQS 288 Query: 322 MFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 A LK G L +VANR L Y LK +F T + F + A K Sbjct: 289 FIAAAASRLKPGGRLLMVANRQLPYELTLKGLFKTVTLLEEAEGFKIFDAKK 340 >UniRef50_C1YW37 16S RNA G1207 methylase RsmC n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YW37_NOCDA Length = 223 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 75/188 (39%), Gaps = 29/188 (15%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEG-EIVDLGC 237 ++P A P T L + VFS +D+G R ++ +P EG ++DLGC Sbjct: 8 SDPGAASRPSTADLVLPDLHLRLRTDRGVFSPDKVDLGTRVLLESVPPPPEGGRLLDLGC 67 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE-- 295 G G I LT+ + P A+V+ VD + AV +R N + LD F + G+ Sbjct: 68 GYGPIALTMASRAPGARVLGVDVNARAVGLARRNAAEH---GLDNARFAVVEPEGGLSVE 124 Query: 296 --------PFR-----------FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGEL 336 P R F+AV NPP + V M L G Sbjct: 125 RGASGEGAPARDDVTAQDLLGPFDAVWSNPPIR----VGKGVLHSMLRTWLGRLTPEGVA 180 Query: 337 YIVANRHL 344 ++V RHL Sbjct: 181 HLVVQRHL 188 >UniRef50_C7NCQ1 Methyltransferase small n=5 Tax=Fusobacteriaceae RepID=C7NCQ1_LEPBD Length = 209 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 46/209 (22%), Positives = 95/209 (45%), Gaps = 17/209 (8%) Query: 178 FNEPQ-LADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL------PENLEG 230 F+E Q + + + + +E ++ VFS+T +D G ++ +N + Sbjct: 5 FSEKQEVKSDKKIIKYTIENKNFEFITDNGVFSKTKVDFGTDVMLKVFLRENQNKKNQKF 64 Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINN- 289 +++D+GCG GV+ + + K++ D + A+ ++ N+ N + EF I Sbjct: 65 DVLDIGCGYGVVSVIIKSFFENTKIISSDVNERALELTKENLLKNNAIKNENEEFEIRKS 124 Query: 290 -ALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELY-IVANRH--LD 345 A + +F+ +L NPP ++++ + L NGE Y ++ +H Sbjct: 125 FAFDNISE-KFDVILSNPPIRAGKQ----TIFQIYEKSSEHLNSNGEFYCVIQTKHGAKS 179 Query: 346 YFHKLKKIFGNCTTIATNNKFVVLKAVKL 374 KL++IF NC T+ N + + + +K+ Sbjct: 180 TQKKLEEIFRNCETLEINAGYRIFRCIKI 208 >UniRef50_A8A8U2 Methyltransferase small n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A8U2_IGNH4 Length = 194 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 15/165 (9%) Query: 187 PQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTL 246 P+ V + G +FS + +D+G + + EG+++D+GCG GV+G+ + Sbjct: 13 PEVVGAWIRGAPLKFIVPRGLFSSSKVDLGTALLAEFMEIPKEGKVLDVGCGYGVLGILM 72 Query: 247 LDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA-----LSGVEPFRFNA 301 NP +V VD +P+AV +++ N E N R + N L G++ F+ Sbjct: 73 AKLNPNLEVYMVDVNPVAVDAAKRNAELNG----VRVTVLQGNLYEPTDLLGIK--DFST 126 Query: 302 VLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY 346 ++ NPP A V E+ A LK G L +V + D+ Sbjct: 127 IVSNPPL----AAGKEVVKEIIEGAPARLKSGGSLQLVMAQGGDW 167 >UniRef50_C0QWV8 Methyltransferase small domain protein n=2 Tax=Brachyspira RepID=C0QWV8_BRAHW Length = 213 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 7/176 (3%) Query: 194 LEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQA 253 ++ D ++ +FS +DIG + + E +I+DLGCG GV+G+ + Sbjct: 8 IKNIDLKFTSNDKLFSPKNIDIGTLSMINEINFEDENKILDLGCGYGVVGILAAKIIGED 67 Query: 254 KVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHA 313 KVV D AV S+ N N ++ + ++ L + F+ +L NPP+H + Sbjct: 68 KVVMCDIDAEAVEISKHNAVLNNVSNINIIQ---SDGLRNIIDNDFSMILSNPPYHTDFS 124 Query: 314 LTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVL 369 + + F+ L +NG+ +V R Y +KL +FG N ++ + Sbjct: 125 VAKHFIESGFYK----LALNGKFVMVTKRLDWYKNKLSSVFGGVKVKEINGYYIFI 176 >UniRef50_B3PHG8 Putative ribosomal RNA small subunit methyltransferase C n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHG8_CELJU Length = 357 Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 73/172 (42%), Gaps = 22/172 (12%) Query: 208 FSRTGLDIGARFFMQHLPENLEGE------IVDLGCGNGVIGLTLLDKNPQAKVV----F 257 F D G+RF ++HLP L E +DLGCG G + L K P+ + Sbjct: 188 FGWNKADQGSRFLLEHLPALLRSEQLAPTTCLDLGCGYGYLTLNA-SKLPECASIQQWLL 246 Query: 258 VDESPMAVASSRLNVETNMPEAL---DRCEFMINNALSGVEPFRFNAVLCNPPFHQQHAL 314 D + A+ S++ NV+ + A D C + EP + +LCNPPFHQ + Sbjct: 247 TDNNAAALLSAQANVDYHQLNAQVVGDDCAAHLR------EPL--DLILCNPPFHQGFNV 298 Query: 315 TDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKF 366 + + A+R LK G V N+ + K +F +A N F Sbjct: 299 EGELTGKFIATAQRLLKRGGLALFVVNQFIPLEKKAAGVFRTIKLLADNGSF 350 >UniRef50_C8WTY2 Methyltransferase small n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTY2_ALIAD Length = 199 Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 11/198 (5%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCG 238 +P + V + G + VFS+ GLD G R ++ + +DLGCG Sbjct: 7 GDPSAPSEERVVRVQARGVTVALWTDRGVFSKAGLDEGTRRLIESVDLTGAASALDLGCG 66 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 G + L P + +D + AV +R N +P+ + + ++ + F+ Sbjct: 67 YGPVTAILARVYPGVQWWMIDVNRRAVELARRNTADLVPQPV----VLQHDGIPPDFEFQ 122 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFH---KLKKIFG 355 F+ VL NPP A + ++ ARR LK G+L++V + KL+++F Sbjct: 123 FDHVLLNPPIRAGKA----TVFRLYEEARRALKPGGKLWVVIQKKHGAPSTEVKLRELFE 178 Query: 356 NCTTIATNNKFVVLKAVK 373 + V AV+ Sbjct: 179 RVDVAHRKAGYFVFCAVR 196 >UniRef50_C8WEU0 Modification methylase, HemK family n=3 Tax=Zymomonas mobilis RepID=C8WEU0_ZYMMN Length = 286 Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 9/108 (8%) Query: 209 SRTGLDIGARFFMQH--LPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVA 266 S T ++ +F + LPEN I+DLG G+G + L LD+ AK + VD SP A+ Sbjct: 105 SETLIETAIAYFREQAFLPEN----ILDLGTGSGALLLAALDEWKDAKGLGVDASPEAIK 160 Query: 267 SSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHAL 314 +RLN + AL R EF I + G++ +F+ +LCNPP+ + A+ Sbjct: 161 IARLNADKC--GALPRVEFKIGHWGRGIQQ-KFDLLLCNPPYIARDAM 205 >UniRef50_C3RJV2 16S rRNA m(2)G 1207 methyltransferase n=4 Tax=Bacteria RepID=C3RJV2_9MOLU Length = 197 Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 15/199 (7%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE--IVDLG 236 N L P+ + G + + VFS+ +D G+R + + E EG+ ++D+G Sbjct: 7 NNEDLISEPEQFIFTYRGKELIFTSDHGVFSKKMIDFGSRVLLDAI-ELDEGKSTLLDVG 65 Query: 237 CGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 296 CG G G+ L P ++ +D + A+ ++ N+ N EA + N + Sbjct: 66 CGYGTFGVALKSAYPALEIDMIDVNERALLLAKQNLAANNLEANVYLSSVYENVTN---- 121 Query: 297 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL---DYFHKLKKI 353 +++ ++ NPP + E A+ L ++GE+++V + L+ + Sbjct: 122 -KYDVIVTNPPIRAGKETVTKILVE----AKEHLNLHGEIWVVIQKKQGAPSAKKNLESV 176 Query: 354 FGNCTTIATNNKFVVLKAV 372 FGN + + + +LKA+ Sbjct: 177 FGNANVVKKDKGYYILKAI 195 >UniRef50_C6ABL9 Ribosomal RNA small subunit methyltransferase C n=5 Tax=Bartonella RepID=C6ABL9_BARGA Length = 342 Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 15/197 (7%) Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGC 237 +N QL P T T + +FS +D G+ ++P+ + G+ D G Sbjct: 156 YNIAQLRSPPLTFG--------TFQTTSGMFSHGRIDPGSAALASYMPKVISGKTADFGA 207 Query: 238 GNGVIGLTLLDKNPQAKVVFV---DESPMAVASSRLNVETNMPEALDRCEFMINNALSGV 294 G G + L+++ + + + D + + A L T +++ ++ + Sbjct: 208 GWGYLSHVALERSEKLTALDLYEADYNALRAAKQHLKSITAPFSIHFYWHDLVHEPITNL 267 Query: 295 EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIF 354 ++ ++ NPPFH Q ++ +A +CLK +G L VANRHL Y LK IF Sbjct: 268 ----YDTIISNPPFHTQQTTDISLGKNFIINAAKCLKPSGSLLFVANRHLPYETLLKNIF 323 Query: 355 GNCTTIATNNKFVVLKA 371 + F +++A Sbjct: 324 RTVLIHEQAHGFKIIEA 340 >UniRef50_C5BI28 RNA methyltransferase, RsmC family n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BI28_TERTT Length = 342 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 10/196 (5%) Query: 180 EPQLADAPQTVSWKLEGTDWTIH--NHANVFSRTGLDIGARFFMQHL---PENLEGEIVD 234 EP D Q +L +D + V+ +D G+ + + P + G +D Sbjct: 150 EPAPLDDKQYTHLRLINSDVAAAYLSKPGVYGWNKIDEGSELLQRSIMDEPVAINGTALD 209 Query: 235 LGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV 294 LGCG G +G+ LL Q +++ D + AV + + N + + + S + Sbjct: 210 LGCGYGYLGVGLLKAGWQ-QIIATDNNAAAVLACNATLTENGAQNF---SVVAADCGSSI 265 Query: 295 EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIF 354 E + + V+CNPPFHQ + ++ +A R LK G V N + + F Sbjct: 266 ER-KADLVVCNPPFHQGFGVESSLTNRFVANAARLLKPGGTALFVVNVFIGLERAGAQYF 324 Query: 355 GNCTTIATNNKFVVLK 370 + T+A N KF V++ Sbjct: 325 SHQETLANNKKFKVIR 340 >UniRef50_D1A2Z3 Methyltransferase small n=2 Tax=Streptosporangineae RepID=D1A2Z3_THECD Length = 228 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 30/205 (14%) Query: 178 FNE-PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLP-ENLEGEIVDL 235 F E P+ A +TV L + VFS +D G R ++ +P EG+++D+ Sbjct: 23 FTERPEAAGRRRTVHLVLPDVHLRLTTDRGVFSPDRIDPGTRILLETVPAPPAEGDLLDV 82 Query: 236 GCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVET--------NMPEALDRCEFMI 287 GCG G I L + ++P+A+V VD + A+ +RLN T + PE +D Sbjct: 83 GCGYGPIALAMALRSPRARVYGVDVNERALQLARLNARTAGIGNASFHRPEQIDPA---- 138 Query: 288 NNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL--D 345 RF A+ NPP A E+ L Y+V ++HL D Sbjct: 139 ---------MRFAALWSNPPIRIGKAALH----ELLTTWLARLLPGATAYLVVHKHLGSD 185 Query: 346 YFHKLKKIFGNCT-TIATNNKFVVL 369 H+ + G T IA+ + + VL Sbjct: 186 SLHRWLQQQGWPTERIASRSAYRVL 210 >UniRef50_C7RA23 Methyltransferase small n=3 Tax=Gammaproteobacteria RepID=C7RA23_KANKD Length = 197 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 9/152 (5%) Query: 207 VFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVA 266 +FS +D G ++++ +DLGCG G +G+T+ + PQ + + VD+ +AV Sbjct: 35 LFSPRNIDDGTIMLLKYMDIETTDNCLDLGCGYGALGITMAKQAPQGQTLMVDKDFVAVD 94 Query: 267 SSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHA 326 + N E N + ++N S V FN + N P + + + + A Sbjct: 95 YANKNCELN---GVTNATARLSNGFSAVTEKNFNVICSNIP----AKVGNELLYIFLQDA 147 Query: 327 RRCLKINGELYIVANRHLDYFHK--LKKIFGN 356 L+ G Y+V L F K K+IFGN Sbjct: 148 WDRLEPGGTFYVVTITGLREFMKKAFKEIFGN 179 >UniRef50_B7CDV5 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDV5_9FIRM Length = 194 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 13/168 (7%) Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEI--VDL 235 F + DAP+ ++ + ++++A VFS+ LD G R ++ + +N + +DL Sbjct: 5 FTNDIVKDAPEEITIHFRDFTYKLNSNAGVFSKDKLDEGTRILLETVLDNQSEPVSCLDL 64 Query: 236 GCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE 295 GCG G I L L++ ++ +D + A + N++ +A C+ SG+ Sbjct: 65 GCGIGPIALILMEYWKYTEMTMIDVNQRACQLADSNMKKYRRKAKIICQ-------SGIN 117 Query: 296 PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 343 ++ +L NPP A+ + +F L +G +IV + Sbjct: 118 EGQYACILLNPPIRTGKAMI----YSLFDQCMEHLATDGHFWIVMRKQ 161 >UniRef50_B8I811 Methyltransferase small n=2 Tax=Clostridium RepID=B8I811_CLOCE Length = 198 Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 19/185 (10%) Query: 196 GTDWTIHNHANVFS-RTGLDIGARFFMQHL-PENLEGEIVDLGCGNGVIGLTLLDKNPQA 253 G+ T + + VFS T +D + +++ P + ++D+GCG G IGL + PQ Sbjct: 25 GSSLTFTSVSGVFSFETKIDRASENLIKNFTPSGMS--VLDIGCGYGAIGLYIKSIFPQQ 82 Query: 254 KVVFVDESPMAVASSRLNVETN--MPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQ 311 + +D + A+ ++ N +N EAL+ +N + +E F+ ++ NPP Sbjct: 83 NITMIDVNNRALDYTKKNAASNNLSVEALN------SNLFTALEGRTFDDIISNPPIAAG 136 Query: 312 HALTDNVAWEMFHHARRCLKINGELYIVA--NRHLDYFHK-LKKIFGNCTTIATNNKFVV 368 L + E + H L NG L++VA N+ K ++ IFGN T + + V Sbjct: 137 KELNTRLITESYEH----LSKNGALWLVAFHNKGGSTLKKVMETIFGNVTDVDKSGGVRV 192 Query: 369 LKAVK 373 K+++ Sbjct: 193 YKSIR 197 >UniRef50_D2RAI3 Methyltransferase small domain protein n=27 Tax=Actinobacteridae RepID=D2RAI3_GARVA Length = 232 Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 18/172 (10%) Query: 181 PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLE-GEIVDLGCGN 239 P D +T+ L + + VFS + LD+G ++H P+ E G+ +D+GCG Sbjct: 34 PSSCDERRTLHVTLRNHETVVQVSNGVFSASKLDLGTSVLLKHAPKPPENGKFLDIGCGW 93 Query: 240 GVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRF 299 G I + + ++P+A++V VD + A+ + LN + + + ++++AL F Sbjct: 94 GPISIAMGLESPEAEIVAVDVNERALELTELNAKNAGLKHIRTS--LVDDALKENNTLEF 151 Query: 300 N---AVLCNPPFHQQHALTDNVAWEMFHHARRC----LKINGELYIVANRHL 344 N + NPP V EM H LK+ G Y+V ++L Sbjct: 152 NNFDLIWSNPPIR--------VGKEMLHDILMTWIPRLKVGGAAYLVVQKNL 195 >UniRef50_Q045V2 16S RNA G1207 methylase RsmC n=22 Tax=Bacilli RepID=Q045V2_LACGA Length = 217 Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 19/212 (8%) Query: 169 KKARLINCTFNEPQLADAPQT------VSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQ 222 K+AR+I N+ A P V + ++ D A VFS+ +D G+ ++ Sbjct: 9 KEARIIMTKKNQMYFAANPDAKHDEHLVDYHIDDIDLKFTTDAGVFSKLRIDYGSGVLIK 68 Query: 223 HLPENL--EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEAL 280 + E E I+D+G G G +GL P +V VD + A+ ++ N + N + Sbjct: 69 TMKELTFPEAGILDVGTGYGPMGLFAAKFWPDQEVDMVDVNERAIDLAKRNAQFN---HI 125 Query: 281 DRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 340 D +N V+ ++ ++ NPP + D + E A+ L NG L +V Sbjct: 126 DNVNIYESNIYEQVDN-KYGLIITNPPIRAGKKVVDQILSE----AKEHLVENGILLVVI 180 Query: 341 NRHLDYFHKLK---KIFGNCTTIATNNKFVVL 369 + K K++GNC +A + + +L Sbjct: 181 QKKQGAPSAKKLMTKVYGNCEILARDKGYYIL 212 >UniRef50_Q1YVK1 RsmC protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YVK1_9GAMM Length = 353 Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 14/177 (7%) Query: 201 IHNHANVFSRTGLDIGARFFMQHLPENLE--GE------IVDLGCGNGVIGLTLLDKNPQ 252 + + +F +D G+ + LP+ ++ GE ++DLGCG G + + Sbjct: 177 LQSKPGIFGWNKIDQGSALLIHQLPQFIQSFGEANRPQSLLDLGCGYGFLSCAAAQQG-L 235 Query: 253 AKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQH 312 K+ D + A+ + ++N + + + +A +E RF+A++CNPPFHQ Sbjct: 236 TKITATDNNAAALKACKVNFDALEVDG----TVLAGDAGCQIEE-RFDAIICNPPFHQGF 290 Query: 313 ALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVL 369 + + + + ++R L G V N + K + F +A +N F ++ Sbjct: 291 NIDSELTAKFLNASKRLLAPRGRALFVVNNFIPLEKKAQDYFPRVREVARSNSFKLI 347 >UniRef50_UPI0000E87AD9 modification methylase, HemK family protein n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87AD9 Length = 283 Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 47/199 (23%), Positives = 93/199 (46%), Gaps = 20/199 (10%) Query: 123 QQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQ 182 + +R+ RK + + + ++ AR+ + + VL T+T L + + I+ N+ Sbjct: 2 ESIRSYRKKIGIELQNLSTITAREAELEAQFILQFVLKETSTQLIIGRNKKISE--NDAG 59 Query: 183 LADAPQTVSWKLEGT-------DWTIH------NHANVFSRTGLDIGARFFMQHLPENLE 229 L ++ V +L GT +W + N + R ++ +Q+ E+ Sbjct: 60 LIES--IVKQRLLGTPLAYLFKEWDFYGRTYYINQQTLIPRQDTELMIDILIQNNKEDSS 117 Query: 230 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINN 289 +I+DLG G+GVIGLTL A++ D S A+ +++N + L +F+ +N Sbjct: 118 LKILDLGTGSGVIGLTLAHHFFNAQITLSDISSEAIKVAKINGGNS---GLKNIQFVESN 174 Query: 290 ALSGVEPFRFNAVLCNPPF 308 + P +F+ ++ NPP+ Sbjct: 175 WFEKIPPGKFDVIVSNPPY 193 >UniRef50_A1U204 Ribosomal RNA small subunit methyltransferase C n=3 Tax=Marinobacter RepID=RSMC_MARAV Length = 351 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 69/284 (24%), Positives = 114/284 (40%), Gaps = 21/284 (7%) Query: 105 QQPG---VVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGP 161 QQ G V++ +PK A E +L R + ++ + ++ ++ F V G Sbjct: 70 QQQGSCDTVVVFLPKARAECELRLALARYLGKPGAALVVIGEKKEGIAGAIKQFSVVAGE 129 Query: 162 TTTTLAWKKARLINCTFNEPQLADAPQT--VSW---KLEGTDWTIHNHANVFSRTGLDIG 216 + + + + C N L + T +SW G ++ VFS LD G Sbjct: 130 VVKVDSARHCQ-VWCGRNTQPLTEFRLTDWLSWTELSCAGVALSVAGLPGVFSLGRLDDG 188 Query: 217 ARFFMQHLPENLEG--EIVDLGCGNGVIGLTL-----LDKNPQAKVVFVDESPMAVASSR 269 R ++ L E+ G + D CG GVIG L L +V D AV +R Sbjct: 189 TRMLLETLAESPLGVDRVFDFACGAGVIGSWLHGFHQLAGKMPIRVDGTDVQAQAVFCAR 248 Query: 270 LNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRC 329 + +A E + L+ V+ + AV+ NPPFH ++ + Sbjct: 249 ----ESYRKAGVNGEIFAADGLAVVQG-NWPAVISNPPFHTGVKTDTSMTEQFLAQVAAH 303 Query: 330 LKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 L GEL +VAN L Y +++ G +A + +F V +A + Sbjct: 304 LAHGGELRLVANSFLPYEALIRQHIGPVEKLAQDRRFTVYRAFR 347 >UniRef50_Q057M1 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=RSMC_BUCCC Length = 343 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/174 (22%), Positives = 82/174 (47%), Gaps = 9/174 (5%) Query: 176 CTFNEPQLADAPQTVSWKLEGT----DWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE 231 C+ + ++ P+ K + TI + VF +D G++ + + + G+ Sbjct: 147 CSLYKAKIMKLPKFYLHKFINIYIWNNITIQSLPGVFGYKKIDTGSKLLISTFNKKINGK 206 Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 I+D+G G G++ + L KNP K+ D A+ S+ N+ N + + F ++ Sbjct: 207 ILDIGSGTGILSIALAKKNPLIKITLTDIYDAAIWCSKNNLIKN--NLIGKVLF--SDIY 262 Query: 292 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLD 345 S ++ R++ ++ NPP H + + ++ ++++ LK GEL IV + + Sbjct: 263 SHIKK-RYDLIISNPPIHYNLKINLKILKKIIKNSKKHLKKKGELRIVISSFIS 315 >UniRef50_B3E629 Protein-(Glutamine-N5) methyltransferase, release factor-specific n=8 Tax=Geobacter RepID=B3E629_GEOLS Length = 286 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 4/85 (4%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 ++D+G G+G I ++L + PQA + VD SP A++ +R N E N + EF++ + Sbjct: 121 VLDIGTGSGCIAISLFHRLPQAAITAVDLSPDALSIARRNAERNNAQ----IEFLLGSFF 176 Query: 292 SGVEPFRFNAVLCNPPFHQQHALTD 316 V RF+ ++ NPP+ L D Sbjct: 177 QPVSERRFDLIVSNPPYITSADLAD 201 >UniRef50_B9KCF8 Putative uncharacterized protein n=1 Tax=Campylobacter lari RM2100 RepID=B9KCF8_CAMLR Length = 230 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 4/87 (4%) Query: 227 NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFM 286 NL+G I+D+GCG G++GL + K P +KV +D + S N + N E CE Sbjct: 28 NLKGNILDIGCGCGILGLLIKQKFPNSKVYLLDIQEQNIKLSYKNAKENKLEIQGICEDF 87 Query: 287 INNALSGVEPFRFNAVLCNPPFHQQHA 313 +N +F+ ++ NPPF++++ Sbjct: 88 LNYK----SDIKFDFLISNPPFYKKNT 110 >UniRef50_C8P1I9 Methyltransferase domain protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1I9_ERYRH Length = 194 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/190 (23%), Positives = 88/190 (46%), Gaps = 16/190 (8%) Query: 188 QTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQ-HLPENLEGEIVDLGCGNGVIGLTL 246 + + ++ +++ + VFS+ GLD G ++ + + L+G++ DLGCG GV+G+ L Sbjct: 16 RDIPFRFLDISFSVISDDGVFSKDGLDRGTEALLKVCVDQPLKGKVADLGCGIGVVGVIL 75 Query: 247 LDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNP 306 ++ VD +P +V + +N E +++ I + L G+ F V+ NP Sbjct: 76 SHFFSDLEMTGVDVNPRSVELANINYEKYNVNGINK----IQDGLDGMYDF----VISNP 127 Query: 307 PFHQQHALTDNVAWEMFHHARRCLKINGE-LYIVANRH--LDYFHKLKKIFGNCTTIATN 363 P + + +F +A L +G ++++ H K + +FGNC + Sbjct: 128 PIR----VGKEKMYSLFDNAYDVLNKDGMFIFVIRKSHGAKSAQAKCEALFGNCELLKKE 183 Query: 364 NKFVVLKAVK 373 + + A K Sbjct: 184 KGYYIYCASK 193 >UniRef50_A4BMP8 HemK protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BMP8_9GAMM Length = 283 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 ++DLG G+G +GL + + P A VV VD P A+A +R N L R +F++ + L Sbjct: 119 VLDLGTGSGAVGLAIATERPDATVVAVDTCPRALAVARCNARRL---GLQRVQFLLGDWL 175 Query: 292 SGVEPFRFNAVLCNPPF 308 RF+ ++ NPP+ Sbjct: 176 EPAGERRFHLIVANPPY 192 >UniRef50_D1J7U8 Protoporphinogen oxydase HEMK n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J7U8_MYCHP Length = 235 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 9/95 (9%) Query: 229 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE-TNMPEALDRCEFMI 287 E +++DLGCG+G+IGL + KN A V D S A+ +++N + N+ + R + Sbjct: 75 ESKVLDLGCGSGLIGLA-IKKNKDANVTLSDISRFAIKQTKINAKLNNLNVNVIRSNWF- 132 Query: 288 NNALSGVEPFRFNAVLCNPPF-HQQHALTDNVAWE 321 N ++ +F+ ++CNPP+ +Q L ++ WE Sbjct: 133 -NKITS----KFDVIVCNPPYLKKQKKLIKSLKWE 162 >UniRef50_B3RUJ8 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RUJ8_TRIAD Length = 347 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 29/145 (20%) Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVA-----SSRLNVETN 275 H EN +D+ CG+G IGL+LL +NPQA + +D+ P A++ S RLN+ + Sbjct: 126 FHHKRENESITFLDICCGSGAIGLSLLCENPQATCIAIDKDPNAISLTELNSQRLNLGSR 185 Query: 276 M-PEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTD------------------ 316 M E LD + ++ E F ++ NPP+ L Sbjct: 186 MIVEHLDVMKTEFHHGFGHDEAVDF--IVSNPPYIPSKQLASLQEEIISFESSLALDGGC 243 Query: 317 ---NVAWEMFHHARRCLKINGELYI 338 ++ ++ H AR CLK G++++ Sbjct: 244 DGLDIVKQILHFARLCLKDKGKIWL 268 >UniRef50_C7R3H0 Methyltransferase small n=2 Tax=Micrococcineae RepID=C7R3H0_JONDD Length = 225 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 72/172 (41%), Gaps = 23/172 (13%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGN 239 P D + + +L+G D + A VFS +D G ++ + G +VD+GCG Sbjct: 18 SPTSKDDTRVIPVRLDGRDVEVMTSAGVFSPGHIDTGTSVLLRTVGAPPSGTVVDVGCGW 77 Query: 240 GVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV---EP 296 G I LT+ +NP A+V VD + +VA + N + R + NA+ E Sbjct: 78 GPIALTMAMRNPDAQVWAVDVNERSVALTARNAQ--------RLDLHCINAVLASDIPED 129 Query: 297 FRFNAVLCNPPF----HQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL 344 F + + NPP HAL W + L+ G V RHL Sbjct: 130 FVVDELWSNPPIRIGKEALHALITQ--WLVR------LRPGGRAVWVVQRHL 173 >UniRef50_Q9V1A1 Ribosomal RNA small subunit methyltransferase C (RRNA (Guanine-n2-)-methyltransferase) (16S rRNA M2G1207 methyltransferase) n=4 Tax=Thermococcaceae RepID=Q9V1A1_PYRAB Length = 195 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 5/130 (3%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGN 239 EP + + + + G + + VFS LD G ++++ + +I+DLGCG Sbjct: 8 EPNVPLKTKQIDVCIRGYCFKFITASGVFSFGKLDRGTELLIENMILKPDWKILDLGCGY 67 Query: 240 GVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRF 299 GVIG ++ VV D + AV +R N++ N + E + N VE +F Sbjct: 68 GVIG--IVASRFVNYVVMTDINKRAVQIARKNIKIN---GVKNAEVRLGNLYEPVEGEKF 122 Query: 300 NAVLCNPPFH 309 ++++ NPP H Sbjct: 123 HSIITNPPVH 132 >UniRef50_Q47PA1 16S rRNA m(2)G 1207 methyltransferase n=1 Tax=Thermobifida fusca YX RepID=Q47PA1_THEFY Length = 205 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 8/108 (7%) Query: 206 NVFSRTGLDIGARFFMQHLPENLE-GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMA 264 VFS +D+G R ++ +P + G ++DLGCG G I L + + P+A VV +D + A Sbjct: 35 GVFSPDRIDLGTRILLETVPPPPDHGTLLDLGCGYGPIALAMALRAPKATVVGIDTNQRA 94 Query: 265 VASSRLNVETNMPEALDRCEF-MINNALSGVEPF---RFNAVLCNPPF 308 +A +R N E N A+ F V+P F A+ NPP Sbjct: 95 LALARRNAEAN---AVPNVSFHRAPGPEDPVDPLLRGPFAALWSNPPI 139 >UniRef50_A6UF35 Methyltransferase small n=17 Tax=Rhizobiales RepID=A6UF35_SINMW Length = 338 Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 3/169 (1%) Query: 206 NVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPM-A 264 +FS +D G+ LP + G D G G G + + L + +P K + + E+ A Sbjct: 172 GMFSHDRVDAGSELLASRLPRDFTGHAADFGAGWGYLSVRLAEASPTLKGIDLFEADFEA 231 Query: 265 VASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFH 324 + ++R N+ N P R F ++ + +++ ++ NPPFH+ HA + M Sbjct: 232 LEAARANMAANAPSTPAR--FYWHDLSTEDTRDKYDLIVMNPPFHEGHAAEPALGAAMIK 289 Query: 325 HARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 A + LK G L +VANR L Y L + F N +F VL A + Sbjct: 290 AAAKALKHGGRLMLVANRGLPYEPVLAENFKEMGETCRNARFKVLWAKR 338 >UniRef50_B7I872 Ribosomal RNA small subunit methyltransferase C n=6 Tax=Acinetobacter RepID=B7I872_ACIB5 Length = 126 Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 43/76 (56%) Query: 296 PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG 355 P +A++ NPPFHQ + + + +A++ LK +GEL+IVANR L+Y ++K FG Sbjct: 49 PTELDAIVSNPPFHQGIHTNYDASEGLCQNAKKHLKASGELWIVANRFLNYPILIEKHFG 108 Query: 356 NCTTIATNNKFVVLKA 371 C F VL A Sbjct: 109 QCEIKTDLQGFKVLYA 124 >UniRef50_A6DL01 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DL01_9BACT Length = 378 Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 18/169 (10%) Query: 198 DWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE-IVDLGCGNGVIGLTLLDKNPQAK-- 254 ++T+ VFS D G + + + + GE I+DLGCG G+IGL L + AK Sbjct: 207 EFTMQTRPGVFSHGRADTGGVALSEAI-DVIPGENILDLGCGAGLIGLALAKRQNDAKPD 265 Query: 255 ----VVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ 310 VV VD + ++ + N+E N + CE I + L E F+ ++ NPP+ Sbjct: 266 HGGSVVLVDSNIRSIECCKKNIEIN---GFENCE-AIASDLYETEK-TFDLIVGNPPYFA 320 Query: 311 QHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTT 359 + A + L G L IV+ +H + ++ K FG TT Sbjct: 321 GQ----RIGEYFIETAMKYLNKTGRLAIVS-KHGEQLAEVAKDFGFKTT 364 >UniRef50_Q1II29 Modification methylase, HemK family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1II29_ACIBL Length = 280 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 5/85 (5%) Query: 225 PENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCE 284 P + E++D+G G+G I TL + P+ KV VD SP A+ + + N + E Sbjct: 109 PREVRWEVLDVGTGSGCIAATLAKEFPRMKVTAVDISPEALQIA----QANAARLEAQVE 164 Query: 285 FMINNALSGVEPFR-FNAVLCNPPF 308 F +++ LS +EP R F+ ++ NPP+ Sbjct: 165 FRVSDLLSAIEPGRQFDMIVSNPPY 189 >UniRef50_C0W0F2 Possible 16S rRNA methyltransferase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W0F2_9ACTO Length = 218 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 5/133 (3%) Query: 189 TVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPEN-LEGEIVDLGCGNGVIGLTLL 247 T+ + L G D + VFS + LD G + ++ +PE G +D+GCG GVI L Sbjct: 34 TLEFSLRGFDLQMQVADQVFSASRLDPGTKVLLKEVPEPPASGRFLDVGCGWGVISTLLG 93 Query: 248 DKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL--SGVEPFRFNAVLCN 305 +P AK+ VD + A+ ++ N N ++ + + AL + E +F+ + N Sbjct: 94 KFSPDAKIWAVDVNGRALDLTKRNANANGCTNVE--TYYAHEALEKARAEGLQFDLIWSN 151 Query: 306 PPFHQQHALTDNV 318 PP A T + Sbjct: 152 PPIRVGKAETHQI 164 >UniRef50_A8TJ19 Predicted O-methyltransferase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJ19_9PROT Length = 253 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 44/160 (27%), Positives = 62/160 (38%), Gaps = 27/160 (16%) Query: 219 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE 278 +P E ++DLGCG G + L LL + PQ VV V+ P +R NV N Sbjct: 38 LLAASVPVRAEQRVLDLGCGAGAVFLCLLARFPQLSVVAVERDPTMAGLARDNVARN--- 94 Query: 279 ALDRCEFMINNALSGV----EPFRFNAVLCNPPFHQQH----------------ALTDNV 318 + ++ LS + E F+ V+ NPPF + A D Sbjct: 95 GVAERATVVTADLSALPASWEMAAFDQVVTNPPFLPANRADPSPQPGRASAGVEATADLG 154 Query: 319 AWEMFHHARRCLKINGELYIV--ANRHLDYFHKLKKIFGN 356 W A RCLK G + ++ +R D L FG Sbjct: 155 VW--IDRAHRCLKPKGRISVIHRVDRLDDLLAALAGRFGG 192 >UniRef50_D0U5Y8 16S RNA G1207 methylase RsmC n=1 Tax=uncultured actinobacterium RepID=D0U5Y8_9ACTN Length = 225 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 12/141 (8%) Query: 206 NVFSRTGLDIGARFFMQHLPE-NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMA 264 VF++ G+D G + + P + G +DLGCG+G I + L +P+AKV +D + A Sbjct: 60 GVFAKKGVDQGTQILLDAAPRPSTTGNFLDLGCGSGAIAMALASYSPEAKVWAIDVNARA 119 Query: 265 VASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFH-QQHALTDNVAWEMF 323 + N + N L + ++S +F+ + NPP + AL D + Sbjct: 120 LQLVGENAQRN---GLGNITALFPQSVS--PDIQFDLIWSNPPIRIGKQALHD-----LL 169 Query: 324 HHARRCLKINGELYIVANRHL 344 L +G+ ++V NR+L Sbjct: 170 DTWLTRLSPSGQAWLVVNRNL 190 >UniRef50_C1F2J0 Ribosomal protein L11 methyltransferase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F2J0_ACIC5 Length = 294 Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 2/88 (2%) Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEAL 280 ++ LPE + D+G G+G I + L PQA V +D S A+ +R N + Sbjct: 119 LERLPEGETVRVADIGTGSGAIAIALAASRPQALVTALDLSEAALRIARENAAAH--GVA 176 Query: 281 DRCEFMINNALSGVEPFRFNAVLCNPPF 308 +R F+ ++ L+ V RF ++ NPP+ Sbjct: 177 ERMRFLQSDLLAAVRGERFAMIVSNPPY 204 >UniRef50_C5RF40 Methyltransferase type 11 n=1 Tax=Clostridium cellulovorans 743B RepID=C5RF40_CLOCL Length = 253 Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 15/130 (11%) Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 +++DLG G G I TL +NP ++V +D + + + N E + E LD F+ N Sbjct: 48 KLMDLGTGTGYIAFTLAKENPNLQIVGLD---IVTNALKANTEKAVKEQLDNITFVEYNG 104 Query: 291 LSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV--------ANR 342 ++ PF+ N C + H T+ + F R LK G+L+I NR Sbjct: 105 MNI--PFQDNTFDCIVTRYAMHHFTE--IEKSFKEIYRVLKPGGQLFISDPTPNERDENR 160 Query: 343 HLDYFHKLKK 352 +D F KL K Sbjct: 161 FVDDFMKLSK 170 >UniRef50_A9WGP8 Methyltransferase small n=5 Tax=Chloroflexaceae RepID=A9WGP8_CHLAA Length = 207 Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 70/165 (42%), Gaps = 14/165 (8%) Query: 188 QTVSWKLEGTDWTIHNHANVFSRTGLDIGA----RFFMQHLPENLEGEIVDLGCGNGVIG 243 + +++ G + +FS +D G R PE I+D+GCG GVIG Sbjct: 14 KRITYVWRGQQFAFDVAHTIFSSFQIDEGTDLLLRLIEPAFPE--PQRILDVGCGCGVIG 71 Query: 244 LTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVL 303 + L + PQA V VD+ +AV +R N E N A + + LS P ++ ++ Sbjct: 72 ICLARRFPQADVTLVDKDLLAVRYARHNAELN---ATTNVTVLGSVGLSEAPPGPYDLIV 128 Query: 304 CNPPFH-QQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF 347 N P +A+ E H L+ GE + V L++ Sbjct: 129 SNIPAKIGDYAIEHEFILEPLRH----LRPGGEYWFVVVSGLNHL 169 >UniRef50_A5CW40 Protein methyltransferase HemK n=3 Tax=Gammaproteobacteria RepID=A5CW40_VESOH Length = 270 Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 11/102 (10%) Query: 213 LDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNV 272 +DI F Q N E++DLG G+GVI +T+ DKNP + D S A+A ++ N Sbjct: 98 IDIALGLFNQ----NQTYEVLDLGTGSGVIAITISDKNPNWNLTATDFSINALAVAKQNT 153 Query: 273 ETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHAL 314 +TN+ F + + F+ ++ NPP+ +Q+ + Sbjct: 154 KTNI-------NFQLGSWFEATPNQTFDLIISNPPYIKQNDI 188 >UniRef50_Q6AE06 Putative uncharacterized protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6AE06_LEIXX Length = 203 Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 16/123 (13%) Query: 193 KLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPE-NLEGEIVDLGCGNGVIGLTLLDKNP 251 +L G + + + +FS +D+G R + H+P G+ +DLGCG G + LTL ++P Sbjct: 24 RLAGQTYELVTASGIFSPERIDMGTRVLLDHVPPAPPSGQFLDLGCGWGPLALTLALESP 83 Query: 252 QAKVVFVDESPMAVASSRLNVE----TNM-PEALDRCEFMINNALSGVEPFRFNAVLCNP 306 A V VD + A+ R N E N+ P DR G+E F + NP Sbjct: 84 HATVWAVDVNTRALDVVRRNAEKLGLKNVNPVTPDRVP-------DGLE---FTTIWSNP 133 Query: 307 PFH 309 P Sbjct: 134 PIR 136 >UniRef50_C8P9J5 Protein-(Glutamine-N5) methyltransferase n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P9J5_9LACO Length = 290 Score = 50.8 bits (120), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 13/138 (9%) Query: 219 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE 278 + + LP + E ++DLG G+GVIG+TL + P V D SP A+A +R N + + Sbjct: 107 WVLAALPADRELRVLDLGTGSGVIGITLALERPCWSVTLSDISPAALAVARENAQRHQ-L 165 Query: 279 ALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYI 338 AL E ++ + + R++ ++ NPP+ D A + A L+ + + Sbjct: 166 ALPLVE---SDLFANLADQRYDVIVTNPPY------IDPAATALMDQA--VLENEPRVAL 214 Query: 339 VANRH-LDYFHKLKKIFG 355 A+ H L ++H+L + G Sbjct: 215 FADEHGLGFYHRLFEQAG 232 >UniRef50_A5EV99 Modification methylase, HemK family n=2 Tax=Cardiobacteriaceae RepID=A5EV99_DICNV Length = 300 Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 7/101 (6%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVF--VDESPMAVASSRLNVETNMPEALDRCEFMINN 289 I+DL CG+G IG+ P A+VV +DE +AVA+ L + ++ + I Sbjct: 128 ILDLCCGSGCIGILAKYHYPDAEVVLADIDEQALAVAAINLQRAAMEDDGVEIVQSDIFT 187 Query: 290 ALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCL 330 A++G F+ +LCNPP+ + + +A E H R+ L Sbjct: 188 AVTGT----FDWILCNPPYVEAEEMA-TIAAEYCHEPRQAL 223 >UniRef50_B7KNT6 Methyltransferase small n=17 Tax=cellular organisms RepID=B7KNT6_METC4 Length = 341 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 4/76 (5%) Query: 233 VDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 292 D+GCG+G G+ + + P+A+VV VD +P A+ ++R+N + +D + ++ LS Sbjct: 163 ADIGCGSGAAGILVAKRLPEAEVVLVDINPAALRAARINARLAV---VDNVRPVHSDMLS 219 Query: 293 GVEPFRFNAVLCNPPF 308 VE F+ ++ NPPF Sbjct: 220 NVE-GSFDLIVSNPPF 234 >UniRef50_A3DMM0 Methyltransferase small n=1 Tax=Staphylothermus marinus F1 RepID=A3DMM0_STAMF Length = 186 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 3/76 (3%) Query: 233 VDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 292 VDLGCG GV+GL LL KN +K +F+D +P+A+ ++ N++ N + + N+++ Sbjct: 25 VDLGCGTGVVGLYLLSKNICSKTLFIDINPVALLNTVYNLKLNNYQHKGLVASIDNDSI- 83 Query: 293 GVEPFRFNAVLCNPPF 308 +E + F V+ NPP+ Sbjct: 84 -LENY-FELVVANPPY 97 >UniRef50_B9XCI6 Protein-(Glutamine-N5) methyltransferase, release factor-specific n=1 Tax=bacterium Ellin514 RepID=B9XCI6_9BACT Length = 289 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 72/138 (52%), Gaps = 17/138 (12%) Query: 220 FMQHLPENLEGEI-VDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE 278 F+ LP + + +D G G+G + +T+ K+P A++ +D SP A+A+++ N T+ + Sbjct: 109 FLNSLPSSPTPPVALDYGTGSGCLAVTVAAKSPTAQLHALDISPDALATAQKNAATH--Q 166 Query: 279 ALDRCEFMINNALSGVEP-FRFNAVLCNPPFHQQHALTDNVAW---EMFHHARRCLKING 334 R +F + + + V P +FN ++ NPP+ +D +A E+ H R L ++G Sbjct: 167 MGSRIQFHLGDGFAAVPPGLQFNLIISNPPY----IASDEIATLQPEVRDHDPR-LALDG 221 Query: 335 ELYIVANRHLDYFHKLKK 352 LD++ +L K Sbjct: 222 -----GRDGLDFYRRLAK 234 >UniRef50_Q6MRK8 HemK protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MRK8_BDEBA Length = 293 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 12/87 (13%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFM----- 286 ++DLGCG+G IGL+LL + P AK++ VD P A+ ++ N ++ + DR +F+ Sbjct: 117 LIDLGCGSGCIGLSLLKEYPNAKLIAVDLLPGAIEVAQRNAQS--LDVADRVQFLNLDAG 174 Query: 287 -INNALSGVEPF----RFNAVLCNPPF 308 + +S + F + ++ NPP+ Sbjct: 175 NVEAIMSAYKDFTGQSSIDVLVSNPPY 201 >UniRef50_D2PU49 Methyltransferase small n=2 Tax=Actinomycetales RepID=D2PU49_9ACTO Length = 206 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 20/200 (10%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL-PENLEGEIVDLGCG 238 +P AD +TV ++ D+ + VFSR LDIG ++ + P ++DLG G Sbjct: 9 DPASADVRRTVQARIWDRDYEFTTASGVFSRDRLDIGTAVLLREVRPTPGRKVVLDLGAG 68 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 G I L +NP A V VD + A+ + +N DR + + + + R Sbjct: 69 YGPIACGLAVENPDAVVWAVDVNNRALELTAINAAAA--GVGDRVHPALPDDVP--DDVR 124 Query: 299 FNAVLCNPPFH----QQHALTDNVAWEMFHHARRCLKINGELYIVANRHL--DYFHK-LK 351 F+ + NP H + H +M LK G ++V ++L D + L Sbjct: 125 FDEIWSNPAIHIGKPELH--------KMLLRWLSRLKPGGTAWLVVGKNLGGDSLQRWLT 176 Query: 352 KIFGNCTTIATNNKFVVLKA 371 + C +A+ F +L+A Sbjct: 177 EQGYPCDRVASAKGFRILRA 196 >UniRef50_C6NTA1 Hypothetical adenine-specific methylase yfcB n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NTA1_9GAMM Length = 304 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 2/85 (2%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 I+++G G+G + + L + PQA V VD SP + + NV + E +R ++ Sbjct: 137 ILEIGTGSGCMAVALARQFPQASVDAVDISPQVLELAAQNVRRHGLE--ERIRLYTSDIF 194 Query: 292 SGVEPFRFNAVLCNPPFHQQHALTD 316 S V P RF+ ++ NPP+ A+ D Sbjct: 195 SAVGPARFDLIVSNPPYVDAAAMAD 219 >UniRef50_B1MVU0 16S RNA G1207 methylase RsmC n=11 Tax=Lactobacillales RepID=B1MVU0_LEUCK Length = 213 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 15/173 (8%) Query: 205 ANVFSRTGLDIGARFFMQHLPENL--EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESP 262 + VFS++ +D G R ++ L + +G+I+DLG G G +G+ + K +V VD + Sbjct: 42 SGVFSKSTVDFGTRTMLEALETVIINDGKILDLGTGYGPVGIAIA-KAMSRQVDMVDVNE 100 Query: 263 MAVASSRLNVETNMPEALDRC-EFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWE 321 A+ ++ N + N L R + I + ++ ++ +L NPP A V Sbjct: 101 RALELAQQNAQKNGVTQLTRIFQSNIYDKITD----KYALILTNPPIRAGKA----VVTV 152 Query: 322 MFHHARRCLKINGELYIVANRHL---DYFHKLKKIFGNCTTIATNNKFVVLKA 371 M A + L+ G+L V + + IFGN IA N + +L++ Sbjct: 153 MLQDAIKHLQPGGKLIAVLQKKQGAPSAQKNMMTIFGNARIIAKNKGYYILES 205 >UniRef50_Q1GYE6 Modification methylase, HemK family n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYE6_METFK Length = 284 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEAL 280 + +P EI+D+G G G IG+TL + PQAKV VD S A+A +R N + Sbjct: 110 LDRIPVGQTCEILDMGTGTGAIGITLALERPQAKVTIVDYSEAALAIARENARQLSAHNV 169 Query: 281 DRCEFMINNALSGVEPFRFNAVLCNPPF 308 +AL G F+ ++ NPP+ Sbjct: 170 TALRSDWFSALGG---RCFDLIVSNPPY 194 >UniRef50_D1R4W7 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4W7_9CHLA Length = 285 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 73/140 (52%), Gaps = 10/140 (7%) Query: 188 QTVSWKLEGTDWTIH-NHANVFSRTGLDIGARFFMQHL-PENLEGEIV-DLGCGNGVIGL 244 Q ++ ++E D + N A + R +I A Q+L ++L G+++ D+ CG+G +G+ Sbjct: 72 QYITGQVEFYDCSFKVNPAVLIPRNETEILADLIAQNLRQQDLSGKVLWDVCCGSGCLGI 131 Query: 245 TLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLC 304 +L K PQ +V+ D S A+ ++ N N + EF+ + L + + + ++C Sbjct: 132 SLKKKFPQLRVILADISDKALQVAKENSFLNRVDV----EFVQGDFLQPFKGTQTDFLVC 187 Query: 305 NPPFHQQ---HALTDNVAWE 321 NPP+ + +L D V +E Sbjct: 188 NPPYIPESDWESLEDEVKYE 207 >UniRef50_D2RP49 Protein-(Glutamine-N5) methyltransferase, release factor-specific n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RP49_ACIFE Length = 302 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 4/100 (4%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 I+DLGCG+G I +LL + P+A+ + VD SP A A +R N ++ DR E ++++ Sbjct: 123 ILDLGCGSGAIIDSLLAELPEARGMGVDISPGAAAVTRENAQSLG--VGDRLETVVSDLY 180 Query: 292 SGV-EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCL 330 V +F ++ NPP+ + L + E+ RR L Sbjct: 181 EKVPREEKFQVLVSNPPYIPEGDLA-GLQAEVHREPRRAL 219 >UniRef50_C4FY86 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FY86_9FIRM Length = 203 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 44/191 (23%), Positives = 85/191 (44%), Gaps = 27/191 (14%) Query: 194 LEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL---EGEIVDLGCGNGVIGLTLLDKN 250 + G + VFS+ +D G++ ++ + + +IV+LG G G + + L Sbjct: 23 VAGLTLSFQTDNGVFSKQRMDYGSKVLVEAFADAVPVGSYQIVELGSGYGPVTIALAKLY 82 Query: 251 PQAKVVFVD----ESPMAVASSRLN-VETNMPEALDRCEFMINNALSGVEPFRFNAVLCN 305 PQA+V V+ +A A+S+LN VE + D ++ + A + V+ N Sbjct: 83 PQAQVTGVEINERAYQLAQANSQLNRVENTAYQLADAGQWQASQAP--------DFVVTN 134 Query: 306 PPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH-----LDYFHKLKKIFGNCTTI 360 PP V + A+ L+ GEL++V + ++ F ++++FGN + Sbjct: 135 PPIR----AGKQVIQQFVRSAQANLRPGGELWLVIQKKQGAPSMETF--MEEVFGNVELV 188 Query: 361 ATNNKFVVLKA 371 + +LK+ Sbjct: 189 TRYKGYWILKS 199 >UniRef50_A6G0Z3 Modification methylase HemK n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G0Z3_9DELT Length = 259 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 5/84 (5%) Query: 225 PENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCE 284 PE L ++D+GCG+G +G+ + A V D SP AVA++R NV + E DRCE Sbjct: 81 PEGLR--VLDMGCGSGAVGVIAALRG-AASVHLADLSPDAVANARANVRRHGLE--DRCE 135 Query: 285 FMINNALSGVEPFRFNAVLCNPPF 308 ++ + RF+ ++ N PF Sbjct: 136 VRCSDLFAAFSDERFDLIVFNVPF 159 >UniRef50_Q1QXC5 Modification methylase, HemK family n=2 Tax=Gammaproteobacteria RepID=Q1QXC5_CHRSD Length = 286 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 3/79 (3%) Query: 230 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINN 289 G +DLG G+G I L L + P VV VD+ P AV + N E AL F++++ Sbjct: 113 GRALDLGTGSGAIALALASERPAWHVVGVDKVPGAVRLATANAER---LALSNATFLVSD 169 Query: 290 ALSGVEPFRFNAVLCNPPF 308 S + F+ + NPP+ Sbjct: 170 WFSALGNETFDVIAANPPY 188 >UniRef50_Q15SR0 Modification methylase, HemK family n=8 Tax=cellular organisms RepID=Q15SR0_PSEA6 Length = 298 Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 13/96 (13%) Query: 223 HLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDR 282 +LP + ++DLG G G I L L + P +V+ +D+S AVA ++ N E N +L + Sbjct: 114 NLPIAEDAHVLDLGTGTGAIALALASEKPNWQVLGIDKSADAVALAKQNAELN---SLPQ 170 Query: 283 CEFMINNALSGVEPFR----------FNAVLCNPPF 308 FM ++ S +E + F+ ++ NPP+ Sbjct: 171 VRFMQSDWFSALEQTQLDQQNNQHNVFSLIVSNPPY 206 >UniRef50_Q5WAJ4 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WAJ4_BACSK Length = 281 Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 15/123 (12%) Query: 170 KARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGA---RFFMQHLP- 225 K+ + + E + D+ T SWKL+ + H R G+ GA + +Q + Sbjct: 30 KSLFLRTVYYERKGGDSVSTTSWKLD----QVTEHYLKQVRGGIPYGADQTKMMLQVISH 85 Query: 226 -ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDES-PMAVASSRLNVETNMPEALDRC 283 ++ +++DLGCGNG + LL P+ + V VD S PM N M E +RC Sbjct: 86 FQSKPFQVLDLGCGNGFLAKLLLKTFPETRAVLVDHSKPML-----HNAAQYMAELQERC 140 Query: 284 EFM 286 F+ Sbjct: 141 TFV 143 >UniRef50_A9BIP2 Methyltransferase small n=11 Tax=Thermotogaceae RepID=A9BIP2_PETMO Length = 225 Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 16/185 (8%) Query: 196 GTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKV 255 G + + V+ + +D + ++ + E +++D+GCG GVIG++L + P + Sbjct: 52 GHKYLFKAPSGVYGKKRIDRASILLIEKV-ELTNEKVLDMGCGYGVIGISLKREFPDIDL 110 Query: 256 VFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALT 315 D + AV S++N + N A+ + N E F+ ++ NPP + Sbjct: 111 YMSDVNNRAVDFSKINAKNNNVNAVIKQ----GNLFKPWEDDYFDVIVSNPPIVAGKEVL 166 Query: 316 DNVAWEMFHHARRCLKINGELYIVA-----NRHLDYFHKLKKIFGNCTTIATNNKFVVLK 370 + E +HH L NG++Y+VA + L+ + +++IFGN + + F V Sbjct: 167 HELIEESYHH----LNENGKIYLVAYHNKGGKALESY--MEQIFGNVKELEKSGGFRVYL 220 Query: 371 AVKLG 375 ++K G Sbjct: 221 SIKRG 225 >UniRef50_C4V130 Putative uncharacterized protein n=2 Tax=Selenomonas RepID=C4V130_9FIRM Length = 258 Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 17/152 (11%) Query: 219 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE 278 + + HLP + G ++++GCG+G + + + P A V +D P + ETN Sbjct: 80 YLLDHLPWDGRGRVLEVGCGSGALSIAAAKRFPLAAVQGIDYWPPMWNYGQAQCETNAAA 139 Query: 279 --ALDRCEFMINNALSGVEP-FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGE 335 DRC F +A P F+AV+ N FH+ D + + A R LK G Sbjct: 140 EGVADRCTFQHGDAAKLDFPDNHFDAVVSNFVFHEVRTQKDK--FMLVEEALRVLKKGGA 197 Query: 336 LYIVANRHLDYFHKLKKIFGNCTTIATNNKFV 367 L +GN + ++FV Sbjct: 198 F------------ALHDTYGNKDMYGSMDEFV 217 >UniRef50_Q0AHU0 Modification methylase, HemK family protein n=5 Tax=Betaproteobacteria RepID=Q0AHU0_NITEC Length = 293 Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 3/88 (3%) Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEAL 280 + +P + I+DLG G+G I +T+ P V VD SP+A+A +R N + ++ Sbjct: 115 LSKIPPDRCCNILDLGTGSGAIAITIARHRPDIYVTAVDLSPLALAVARRNAKRC---SV 171 Query: 281 DRCEFMINNALSGVEPFRFNAVLCNPPF 308 + F+ + SG +F+ ++ NPP+ Sbjct: 172 ENVVFIKADWFSGFISEKFDVIVANPPY 199 >UniRef50_Q93NC8 Protoporphyrinogen oxidase HemK n=3 Tax=Myxococcales RepID=Q93NC8_MYXXA Length = 293 Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 3/89 (3%) Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEAL 280 ++ LP++ G +DL G+G I ++L + PQA V+ D SP A A +R N + Sbjct: 110 LRMLPKDAPGRALDLCTGSGCIAISLAAERPQATVIATDLSPDACALARENAQAL--GVA 167 Query: 281 DRCEFMINNALSGVEPF-RFNAVLCNPPF 308 DR + + + V RF V+ NPP+ Sbjct: 168 DRVTVLQGDLFTPVPAGERFQVVVSNPPY 196 >UniRef50_Q1NJ01 Modification methylase HemK n=3 Tax=Deltaproteobacteria RepID=Q1NJ01_9DELT Length = 325 Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 4/85 (4%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 I+DLG G+G++ + L + A+V+ VD SP A+A +R NV + E+ R + + L Sbjct: 146 ILDLGTGSGILAVVLARELAPARVIAVDRSPAALAVARRNVCRHRVES--RVSLLAADWL 203 Query: 292 SGVEPFR--FNAVLCNPPFHQQHAL 314 S + + F+ V+ NPP+ + AL Sbjct: 204 SALAAGKALFDLVVANPPYVEDVAL 228 >UniRef50_Q7UM12 Probable ribosomal RNA small subunit methyltransferase C n=1 Tax=Rhodopirellula baltica RepID=Q7UM12_RHOBA Length = 346 Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 10/150 (6%) Query: 200 TIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVD 259 T+H+ +VFS +D A +++ P +++LGCGNG + + ++ VD Sbjct: 180 TVHSRPSVFSHRSVDRAAAAMIRNAPIPEGSTVLELGCGNGAVAMAAAMRSKTGHAYAVD 239 Query: 260 ESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVA 319 + AV + N + L N L V P + L NPP++ + ++ Sbjct: 240 CNSRAVQCTERAAAQNQIKNLTAI-VNHNGELPNVPP--CDIALLNPPYYGDFRIAEHF- 295 Query: 320 WEMFHHARRCLKINGELYIV---ANRHLDY 346 M A++ L+ GE Y++ +R+L+Y Sbjct: 296 --MVTAAKK-LRSGGEAYVITKQTDRYLEY 322 >UniRef50_Q9ZJB6 Putative n=14 Tax=Helicobacter RepID=Q9ZJB6_HELPJ Length = 238 Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 18/118 (15%) Query: 229 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVD-ESPMAVASSRLNVETNMPEALDRCEFMI 287 G I+D+G G GV+GL NP A V V+ +S MA S + ++ P A + Sbjct: 35 SGAILDIGSGCGVLGLLCARDNPLASVHLVEKDSKMAFCSQKNALK--FPNA----QVFE 88 Query: 288 NNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHA-----------RRCLKING 334 ++ L P ++A++CNPPF+ ++ + H + ++CLK G Sbjct: 89 SDFLDFNPPILYDAIVCNPPFYALGSIKSQIKGHARHQSELDFASLVAKVKKCLKPKG 146 >UniRef50_D0NHA4 Methylase subunit of polypeptide release factor, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NHA4_PHYIN Length = 261 Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 13/88 (14%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINN-- 289 I+D+G G+G + L+ L + P+A V +D S A+A ++ N ++N E +R EF++ + Sbjct: 62 ILDIGTGSGCLLLSALSEFPRATGVGIDISAGALAIAKENAQSNKLE--ERSEFLLRDLK 119 Query: 290 ALSGVEP---------FRFNAVLCNPPF 308 L G+ RF+ +LCNPP+ Sbjct: 120 TLPGLRSDVAEDEALFRRFDVILCNPPY 147 >UniRef50_Q0HYK7 Modification methylase, HemK family n=17 Tax=Alteromonadales RepID=Q0HYK7_SHESR Length = 286 Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 6/128 (4%) Query: 223 HLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDR 282 +LP +++DLG G G I L L + ++ VD+ AVA ++ N TN+ L++ Sbjct: 109 NLPLESNAKVLDLGTGTGAIALALASERATWQITAVDKVEEAVALAKAN-RTNLK--LEQ 165 Query: 283 CEFMINNALSGVEPFRFNAVLCNPPF---HQQHALTDNVAWEMFHHARRCLKINGELYIV 339 E + ++ S ++ F+ ++ NPP+ +H +V +E + +LY + Sbjct: 166 VEILQSDWFSAIKAHDFDLIVSNPPYIDEADEHLHQGDVRFEPQSALTAADEGFADLYYI 225 Query: 340 ANRHLDYF 347 A DY Sbjct: 226 AKTARDYL 233 >UniRef50_C6XAY7 Modification methylase, HemK family n=18 Tax=cellular organisms RepID=C6XAY7_METSD Length = 297 Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 9/97 (9%) Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVET-----N 275 + +P E++DLG G G I L + P+++V+ VD S A+ +R N E Sbjct: 110 LARIPSEDTREVLDLGTGTGAIALAIAAHRPKSRVIGVDASAAALQVARQNAEALGLAIT 169 Query: 276 MPE----ALDRCEFMINNALSGVEPFRFNAVLCNPPF 308 P+ EF + + + + +F+ ++ NPP+ Sbjct: 170 EPDTHGITKGNVEFRLGSWFTPLAGLKFDVIVSNPPY 206 >UniRef50_B3WDK8 Protoporphyrinogen oxidase (Putative) n=9 Tax=Lactobacillus RepID=B3WDK8_LACCB Length = 276 Score = 47.4 bits (111), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 5/76 (6%) Query: 233 VDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 292 +DLG G+G IGLTL K PQ + D SP A+A ++ N + E +F +++ + Sbjct: 115 LDLGTGSGAIGLTLARKLPQTTMTLSDVSPEALAVAKQNAK----EQQVAVQFTVSDLFA 170 Query: 293 GVEPFRFNAVLCNPPF 308 + P R++ V+ N P+ Sbjct: 171 AL-PARYDFVVTNLPY 185 >UniRef50_B8H244 Peptide release factor-glutamine N5-methyltransferase n=8 Tax=Caulobacteraceae RepID=B8H244_CAUCN Length = 289 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 9/128 (7%) Query: 220 FMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEA 279 ++ PE++ ++DLG G+G I L +L + P AK + +D S A+A +R N Sbjct: 106 VLKAFPEHMAFSMLDLGVGSGTILLAVLAERPAAKGLGIDASSEALAVARENAAN----- 160 Query: 280 LD---RCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGEL 336 LD R + + +G+ F+ V+ NPP+ + D + E+ H R G Sbjct: 161 LDLNTRAALLHGDWTTGLGSDSFDLVVSNPPYIPTEVI-DTLEPEVRIHEPRLALDGGPD 219 Query: 337 YIVANRHL 344 + A R L Sbjct: 220 GLAAYREL 227 >UniRef50_Q67TD4 Putative protoporphyrinogen oxidase n=1 Tax=Symbiobacterium thermophilum RepID=Q67TD4_SYMTH Length = 305 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 + D+G G+G I + + P A+VV VD SP A+A + N N DR F + L Sbjct: 137 VADIGTGSGAIAVAVAHLLPHAQVVAVDLSPEALAVAAENARLN--GVADRVRFRQGDLL 194 Query: 292 SGV--EPFRFNAVLCNPPFHQQ 311 + + E RF A+L NPP+ ++ Sbjct: 195 APLAEEGGRFAAILSNPPYIRE 216 >UniRef50_A5EWT8 Modification methylase, HemK family n=2 Tax=Cardiobacteriaceae RepID=A5EWT8_DICNV Length = 276 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 25/127 (19%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 ++DLG G+G I L + + P +V+ VD+S A+ R+ E L F++++ L Sbjct: 113 VIDLGTGSGAIALAIAAERPHCRVLAVDKSWDAL---RVAQENARHLQLANVHFVLSDWL 169 Query: 292 SGVEPFRFNAVLCNPPF---HQQHALTDNVAWE-----------------MFHHARRCLK 331 + + R + ++ NPP+ H +H +A+E + HA RCL+ Sbjct: 170 TAIADARADMIVSNPPYIDAHDEHLAA--LAYEPQMALVSPEHGYADLLHLIAHAGRCLR 227 Query: 332 INGELYI 338 NG L + Sbjct: 228 PNGWLLL 234 >UniRef50_C6QJN8 Methyltransferase small n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QJN8_9RHIZ Length = 266 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 63/143 (44%), Gaps = 16/143 (11%) Query: 177 TFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL-PENLE-GEIVD 234 F P AP T L G T+ N + R G D A L PE L G ++D Sbjct: 3 AFEAPGRTVAPTTDDLFLGGA-LTVLQPRNGY-RAGTD--AVLLASILTPETLGLGAVLD 58 Query: 235 LGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINN----- 289 +G G GVIGL + + P A+ V ++ P+ A +R NV+ N E R + + Sbjct: 59 VGAGVGVIGLCVARRCPSARAVLLERDPVLAALARDNVQRN--ELTGRVSVVETDLARAT 116 Query: 290 ---ALSGVEPFRFNAVLCNPPFH 309 + ++ F VL NPP+H Sbjct: 117 AALEAAEIKSESFPVVLANPPYH 139 >UniRef50_A0P2X4 Methyltransferase n=2 Tax=Rhodobacteraceae RepID=A0P2X4_9RHOB Length = 269 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 13/125 (10%) Query: 196 GTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKV 255 G +H R GLD A + LP+ G +VDLG G G G + P+ KV Sbjct: 22 GGKVYVHQPKRGRHRAGLD--AVYLAAALPDGTRGHVVDLGAGVGTAGFCAAARLPEIKV 79 Query: 256 VFVDESPMAVASSRLNVETNMPEAL-DRCEFM---------INNALSGVEPFRFNAVLCN 305 VD +A +R +E A DR + + +A +G+ P + + N Sbjct: 80 TLVDIDETVLALARRGLEDPANRAFSDRVSLLEADITAKGSVRHA-AGLTPALADHAIMN 138 Query: 306 PPFHQ 310 PP+++ Sbjct: 139 PPYYE 143 >UniRef50_B8KG51 Protein-(Glutamine-N5) methyltransferase, ribosomal protein L3-specific n=2 Tax=unclassified Gammaproteobacteria RepID=B8KG51_9GAMM Length = 321 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 2/77 (2%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 I+DL CG G IG+ P+ +VV D A++ +R N+ E R + ++ + Sbjct: 148 ILDLCCGGGCIGIAAAVYQPELQVVLADIDADALSLARENIARY--ELQSRVQVRQSDLM 205 Query: 292 SGVEPFRFNAVLCNPPF 308 + RF+ +LCNPP+ Sbjct: 206 DALGDERFDVILCNPPY 222 >UniRef50_B6YSP9 Ribosomal RNA small subunit methyltransferase C n=5 Tax=Thermococcus RepID=B6YSP9_THEON Length = 209 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 5/130 (3%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGN 239 EP + +T+ L G + + VFS LD G ++ + + ++DLGCG Sbjct: 22 EPNVPLKTKTIEVCLRGHCFKFITASGVFSFGKLDRGTELLIESMILDGNWRVLDLGCGY 81 Query: 240 GVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRF 299 G IG ++ VV D + AV+ +R N++ N + E + V +F Sbjct: 82 GAIG--IVASRFVEYVVMTDVNRRAVSIARKNLKIN---NVRNAEVRWGSLYEPVRGEKF 136 Query: 300 NAVLCNPPFH 309 + ++ NPP H Sbjct: 137 DTIITNPPVH 146 >UniRef50_D1B2X8 Modification methylase, HemK family n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B2X8_SULD5 Length = 273 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 6/95 (6%) Query: 229 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN 288 E IV++GCG+G+I + L P K+ VD S A+ S+ N + R F+ Sbjct: 111 EAHIVEIGCGSGIISIMLALMLPDVKITAVDISNEALHVSQKNAVKH--GVSKRIAFVQG 168 Query: 289 NALSGV-EPFRFNAVLCNPPFHQQH-ALTDNVAWE 321 + L GV EP + ++ NPP+ H AL +N+++E Sbjct: 169 SYLDGVSEP--IDMIVSNPPYIANHEALEENLSYE 201 >UniRef50_A2SU41 Methyltransferase type 11 n=4 Tax=Euryarchaeota RepID=A2SU41_METLZ Length = 287 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 11/136 (8%) Query: 218 RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP 277 R F + LP I+D+GCG G + + + + P++ V +D +V S+LN E Sbjct: 130 RAFAEVLPLLSGKNILDVGCGLGTLAIKIAEAKPESLVYGIDLLESSVEQSKLNAEV--- 186 Query: 278 EALDRCEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGEL 336 E + F++ N E F++V+C H D++ + +R LK +GE+ Sbjct: 187 EGVANTRFVVANTYELPFEEGYFDSVVCIFMLHH----LDDIPGAL-RDIKRVLKPSGEV 241 Query: 337 YIVANRHLDYFHKLKK 352 + V +D+FH +++ Sbjct: 242 FAV--EPIDHFHDVQR 255 >UniRef50_B3DUZ0 SAM-dependent methyltransferase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DUZ0_METI4 Length = 219 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 8/122 (6%) Query: 220 FMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEA 279 F + P EG ++D+GCG I + K P+AK++ VD SP +A ++ +E N Sbjct: 35 FERLFPHFKEGLVLDMGCGTADIAIRFARKYPRAKIIGVDGSPAMLALAQQRIEEN--HL 92 Query: 280 LDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 339 L E + P F+ ++ N H H + W R L NG L +V Sbjct: 93 LASIELIKGRLPYWNYPRSFDVLISNSLLH--HLPSAKELWTSL----RNLSKNGSLVLV 146 Query: 340 AN 341 + Sbjct: 147 VD 148 >UniRef50_A7RQR0 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RQR0_NEMVE Length = 214 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 9/87 (10%) Query: 233 VDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE---TNMPEALDRCEF-MIN 288 +D+G G+G I L+LL +N +A V +D SP+AV +RLN N L C +N Sbjct: 55 LDVGSGSGAICLSLLSENEKASGVAIDVSPVAVKLTRLNAHRCGMNCRLELYHCPIGELN 114 Query: 289 NALSGVEPFRFNAVLCNPPFHQQHALT 315 L +F+ ++ NPP+ +H +T Sbjct: 115 MTLK-----KFDMIVSNPPYIPEHDMT 136 >UniRef50_A5GT68 Possible SAM-dependent methyltransferase n=2 Tax=Synechococcus RepID=A5GT68_SYNR3 Length = 222 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 2/107 (1%) Query: 219 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE 278 + Q P L ++DLGCG G I L L+ + PQ +V+ VD +P +A ++ + + Sbjct: 35 WIAQRFPAGLGERVIDLGCGPGNIALLLVQRWPQLEVLGVDGAPKMLAVAKERAQFLPSD 94 Query: 279 ALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHH 325 R E+ P +AV+ N H H V W H Sbjct: 95 QARRLEWQQACLPDPTLPGGVSAVVSNSLLHHLH--EPAVLWNSIKH 139 >UniRef50_A1RUS7 Methyltransferase small n=1 Tax=Pyrobaculum islandicum DSM 4184 RepID=A1RUS7_PYRIL Length = 225 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/154 (29%), Positives = 65/154 (42%), Gaps = 26/154 (16%) Query: 227 NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFV-DESPMAVASSRLNVETN-MPEALDRCE 284 + G + DLG G+G I + L K+PQ + V D SP+A+A++R+N E N + + C Sbjct: 53 DARGRVADLGTGSGAIAIA-LAKSPQVETVCAYDISPLALATARVNAEINRVAHKVAICP 111 Query: 285 FMINNALSGVEPFRFNAVLCNPPFHQQHALTD-NVAW----------EMFHHARRCLKIN 333 AL P ++ V NPP+ + + W E+ A LK Sbjct: 112 --TRKALLAAAP--YDVVTANPPYLPLDPRDEKDKNWCAGRHLEAIREITAQATHILKPG 167 Query: 334 GELYIVANRHLDYF--------HKLKKIFGNCTT 359 G LYI A+ D H L CTT Sbjct: 168 GTLYITASTLTDMKQAAKILAQHGLTPKIKACTT 201 >UniRef50_C9MPV4 Methyltransferase n=2 Tax=Prevotella RepID=C9MPV4_9BACT Length = 237 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 25/129 (19%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 I+D+G G G+I L + + PQA + ++ P A+ + +N+E++ DR + +I+++L Sbjct: 36 ILDIGTGTGLIALMMAQRFPQAHIDAIEIDPKALEDAHVNIESS--PFHDRIK-LIHSSL 92 Query: 292 SGVEPFRF--------NAVLCNPPFH-------------QQHALTDNVAWEMFHHARRCL 330 +P F +A++ NPP+ +H +T E+ HA R L Sbjct: 93 QYYKPSLFPPNVDNVYDAIISNPPYFINSLKNPLQERTVARHTVT-LTPKELLQHASRLL 151 Query: 331 KINGELYIV 339 K G L ++ Sbjct: 152 KDEGILSLI 160 >UniRef50_A3EUN2 Modification methylase (HemK) n=2 Tax=Leptospirillum sp. Group II RepID=A3EUN2_9BACT Length = 293 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 9/103 (8%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 I+DLGCG+G++G++LL K P+A + VD S + + SR N L R F+ + Sbjct: 126 ILDLGCGSGILGISLLKKFPKAHCLAVDRSVVPLEVSRKNALAL--GVLSRIHFVQGDW- 182 Query: 292 SGVEPFR----FNAVLCNPPFHQQHALTDNVAWEMFHHARRCL 330 E R F+ ++ NPP+ L+ +F+ R L Sbjct: 183 --TEMLRLDQGFDLIVSNPPYIASGDLSGLDPEILFYEPREAL 223 >UniRef50_A1SNI3 Methyltransferase small n=4 Tax=Actinomycetales RepID=A1SNI3_NOCSJ Length = 205 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 39/76 (51%) Query: 196 GTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKV 255 G + T+ + + VFSR LD + ++G +DLGCG GVIGL + P A + Sbjct: 26 GRELTLVSGSGVFSRGHLDHATAVLFRETEPPVQGRFLDLGCGYGVIGLAIAAAVPLASI 85 Query: 256 VFVDESPMAVASSRLN 271 +D + A+A + N Sbjct: 86 TAIDVNDRAIALANEN 101 >UniRef50_C6D5G9 Modification methylase, HemK family n=2 Tax=Paenibacillus RepID=C6D5G9_PAESJ Length = 283 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 14/89 (15%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 +VD+G G G IG+TL + P+ +V D SP A+A +R N + EA R F+ + L Sbjct: 103 VVDVGTGTGAIGVTLASQRPRWRVSASDLSPDALAVARTNAARH--EAAGRMAFVQGDLL 160 Query: 292 S------------GVEPFRFNAVLCNPPF 308 + E R + ++ NPP+ Sbjct: 161 APFAKRGAAGAALDAEDIRIDVLVSNPPY 189 >UniRef50_Q2BHC0 Probable ribosomal RNA small subunit methyltransferase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHC0_9GAMM Length = 346 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 25/181 (13%) Query: 202 HNHANVFSRTGLDIGARFFMQHLPENL------EGEIVDLGCGNGVIGLTLLDKNPQAKV 255 ++ VF +D G+ F ++HL + L +DLGCG G + L + V Sbjct: 174 YSKPGVFGWDKVDKGSAFLIEHLDQFLMTLPEPPKNALDLGCGYGYLSLNI--SQLDIPV 231 Query: 256 VFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL------SGVEPFRFNAVLCNPPFH 309 D + A+ + + N DR + IN + G+ +F+ ++CNPPFH Sbjct: 232 TASDNNAAAILACQRN--------FDR--YPINGKVIPASCAEGISE-KFDLIICNPPFH 280 Query: 310 QQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVL 369 ++ ++ L G V N H+ K + F IA N F ++ Sbjct: 281 AGFSVDGDLTDRFLKATHDRLNERGVACFVTNLHIPLERKALQYFHQAECIAANGNFKLV 340 Query: 370 K 370 + Sbjct: 341 R 341 >UniRef50_B0TX38 Modification methylase, HemK family n=19 Tax=Francisella RepID=B0TX38_FRAP2 Length = 285 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 47/83 (56%), Gaps = 3/83 (3%) Query: 226 ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEF 285 +N + +I+DLG G+G I L L ++ P+++VV VD + ++ N N + EF Sbjct: 113 KNAQLKILDLGTGSGAIALALAEELPKSQVVAVDLYSKTLDVAKKNALAN---KIVNVEF 169 Query: 286 MINNALSGVEPFRFNAVLCNPPF 308 M ++ ++ +F+ ++ NPP+ Sbjct: 170 MQSSWYENLDATKFDIIVSNPPY 192 >UniRef50_Q1N3L9 Modification methylase, HemK family protein n=1 Tax=Bermanella marisrubri RepID=Q1N3L9_9GAMM Length = 281 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 8/91 (8%) Query: 219 FFMQHL-PENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP 277 + ++H P+N ++DLG G G + L + PQA VV VD AVA ++ N + N Sbjct: 104 YIVEHFNPKN----VLDLGTGTGALALATAKEYPQASVVAVDVIEEAVALAKENAKLN-- 157 Query: 278 EALDRCEFMINNALSGVEPFRFNAVLCNPPF 308 + E + ++ + V RF+ ++ NPP+ Sbjct: 158 -KVTNVEILQSDWFALVPKRRFDLIVSNPPY 187 >UniRef50_C6HYV5 Modification methylase, HemK family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HYV5_9BACT Length = 308 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 5/79 (6%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINN-- 289 I+DLG G+GVI L+ L + P+A+ V V+ P+A+A+ N + +DR + + Sbjct: 139 ILDLGSGSGVIALSFLLERPEARAVAVEREPLALATLLENRRRH--RLVDRLAVVRGDWE 196 Query: 290 ALSGVEPFRFNAVLCNPPF 308 + G P F+ +L NPP+ Sbjct: 197 EMFGERPV-FDCILSNPPY 214 >UniRef50_Q8NVG6 MW2041 protein n=64 Tax=Staphylococcus RepID=Q8NVG6_STAAW Length = 278 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 8/92 (8%) Query: 221 MQHLPENLEGE--IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE 278 M H + LE + IVD+G G+GV+ +TL + P V+ D S A+ +R N E + Sbjct: 100 MLHFLQQLEDDATIVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQ-- 157 Query: 279 ALDRCEFMINNALSGV--EPFRFNAVLCNPPF 308 + +F+ +AL + E + N ++ NPP+ Sbjct: 158 --SQIQFLTGDALKPLINEDIKLNGLISNPPY 187 >UniRef50_A7GYR0 UDP-MurNac-pentapeptide presynthetase n=7 Tax=Campylobacteraceae RepID=A7GYR0_CAMC5 Length = 237 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 6/93 (6%) Query: 219 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE 278 F L +GE++D+GCG GV+GL L A + +D + + SR N N E Sbjct: 22 FIKDRLNAWFKGEVLDVGCGCGVLGLLLKRDFKGASLSLLDVQDINLEISRQNARANGLE 81 Query: 279 ALDRCEFMINNALSGVEP-FRFNAVLCNPPFHQ 310 A ++N +G + +F+ ++ NPPF+ Sbjct: 82 AK-----ILNADFAGFKSETKFDLIVSNPPFYH 109 >UniRef50_C0GGF2 Protein-(Glutamine-N5) methyltransferase, release factor-specific n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GGF2_9FIRM Length = 283 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 6/94 (6%) Query: 219 FFMQHLPENLEG----EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVET 274 F ++ + E L+ I+++G G+G + ++L P+A+VV VD S A+ ++ N Sbjct: 101 FLVEAVAEELQAHTSPRILEIGAGSGAVAVSLAKLLPKARVVAVDVSQAALEIAQKNAAR 160 Query: 275 NMPEALDRCEFMINNALSGVEPFRFNAVLCNPPF 308 + R EF+ + + V F+AV+ NPP+ Sbjct: 161 H--GVAGRVEFLAGDLYAPVADEYFDAVVSNPPY 192 >UniRef50_C5VLW9 Methyltransferase small domain protein n=1 Tax=Prevotella melaninogenica ATCC 25845 RepID=C5VLW9_9BACT Length = 236 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 22/127 (17%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 I+D+G G G+I L + + A++ ++ A+ + LNV + DR ++N++L Sbjct: 36 ILDIGTGTGLIALMMAQRFSTAQIDAIEIDKGALEDAHLNVSASPFN--DRIN-ILNSSL 92 Query: 292 SGVEPFR-------FNAVLCNPPFH--------QQHAL---TDNVA-WEMFHHARRCLKI 332 P ++A++CNPP+ QQ TD ++ E+ +H++R LK Sbjct: 93 QDYIPCSETQEEGIYDAIVCNPPYFINSLKNPLQQRTTARHTDTLSHQELIYHSKRLLKA 152 Query: 333 NGELYIV 339 NG L ++ Sbjct: 153 NGTLSVI 159 >UniRef50_D0I834 Predicted O-methyltransferase n=4 Tax=Vibrionaceae RepID=D0I834_VIBHO Length = 269 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 2/77 (2%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 I+D+G G G++ L + + P A++ +D A ++R N E + DR + + Sbjct: 75 ILDIGTGTGLLALMMAQRFPTARITALDIDAHAAETARFNAEQSAWH--DRIDVHHQDIC 132 Query: 292 SGVEPFRFNAVLCNPPF 308 + +F+ ++CNPP+ Sbjct: 133 TWESSAQFDTIVCNPPY 149 >UniRef50_C4PP34 Peptide release factor-glutamine N5-methyltransferase n=16 Tax=Chlamydiaceae RepID=C4PP34_CHLTJ Length = 290 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 9/77 (11%) Query: 234 DLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG 293 D+ CG+G IGL + P +V D SP A+A + N +N A+D F++ + Sbjct: 115 DVCCGSGCIGLAVRKHCPHVRVTLSDISPEALAIAESNARSNAL-AVD---FLLGDLF-- 168 Query: 294 VEPFRFNA--VLCNPPF 308 +PF F A ++CNPP+ Sbjct: 169 -DPFSFPADVLVCNPPY 184 >UniRef50_C9M8H5 Methlytransferase, UbiE/COQ5 family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8H5_9BACT Length = 225 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 9/96 (9%) Query: 217 ARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM 276 AR + LP++ G ++D+ G GV L + + P A++V +D SP+ + R ++ Sbjct: 47 ARIVLDMLPKDFSGRMLDVPAGTGVFTLQMYQQLPNAEIVCLDYSPVMLERFRRRAGKSV 106 Query: 277 PEALDRCEFMINNALSGVEPFR---FNAVLCNPPFH 309 P+ + G PF F+ VLC +H Sbjct: 107 PQV------TLTQGDVGELPFEDESFDGVLCMNGYH 136 >UniRef50_B7G854 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G854_PHATR Length = 424 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 10/84 (11%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 I+D+GCG G IG++L K P + V +D +AVA++ N E + + N L Sbjct: 247 ILDVGCGTGCIGVSLAAKLPNSFVEAIDVEHVAVATATENAERVLGAQY---QARFNAQL 303 Query: 292 SGVEPF-------RFNAVLCNPPF 308 E F RF+AV+ NPP+ Sbjct: 304 CEAEVFDVATVQDRFDAVVSNPPY 327 >UniRef50_C7MDT2 Protein-(Glutamine-N5) methyltransferase, release factor-specific n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MDT2_BRAFD Length = 301 Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust. Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 13/132 (9%) Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP------EALDRCE 284 E+VDL G+G +G +LD+ P A+V+ V+ P A A +R N++ P EA D C Sbjct: 118 EVVDLCAGSGALGAAVLDEIPGARVLAVEIDPAAAALTRRNLDRAGPGRGRVLEA-DLCA 176 Query: 285 FMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH- 343 + L+ P +AVL NPP+ A+ + A H R L G + R Sbjct: 177 EVPE--LAAAAP--VDAVLSNPPYIPPEAVPRD-AEVREHDPHRALFGGGPDGLEVPRAV 231 Query: 344 LDYFHKLKKIFG 355 LD+ +L + G Sbjct: 232 LDWARRLLRPGG 243 >UniRef50_C5B815 Protein-(Glutamine-N5) methyltransferase, release factor-specific n=11 Tax=Gammaproteobacteria RepID=C5B815_EDWI9 Length = 279 Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 +IVDLG G G I L L + P +V V+ +P AVA ++ N L R E + + Sbjct: 112 QIVDLGTGTGAIALALASERPDCQVSAVEFNPDAVALAQHNAARL---GLSRVEILQGSW 168 Query: 291 LSGVEPFRFNAVLCNPPF 308 + + RF ++ NPP+ Sbjct: 169 FTPLAGRRFTLIVSNPPY 186 >UniRef50_Q7S6C0 Predicted protein n=1 Tax=Neurospora crassa RepID=Q7S6C0_NEUCR Length = 229 Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust. Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 1/59 (1%) Query: 215 IGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273 I R F+ + +NL +I+DLGCG G + + DK P AKVV VD SP+ S NVE Sbjct: 127 IYGRHFLSPIGDNL-NKILDLGCGTGKWTVEIADKFPFAKVVGVDLSPIQAVLSPENVE 184 >UniRef50_D1YVR2 Putative methyltransferase n=1 Tax=Methanocella paludicola SANAE RepID=D1YVR2_METPS Length = 295 Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 12/138 (8%) Query: 207 VFSRTGLDIGARFF---MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPM 263 +FS G ++ + + + +L N +G+++D+GCG+ + + L K P A++ VD Sbjct: 101 MFSARGGNVQNKIYDLVLANLAWNGQGKLLDIGCGSAALTIKLAKKYPNARLTGVDFWGH 160 Query: 264 AVASSRLNVETNMPE--ALDRCEFMINNALSGVEPFR---FNAVLCNPPFHQQHALTDNV 318 + S+ E N DR F +A+ PF F+AV+ N FH+ D Sbjct: 161 NWSYSKKICEKNAAAEGVSDRVTFQKASAMK--LPFEDETFDAVVSNLTFHEVRDAKDKK 218 Query: 319 AWEMFHHARRCLKINGEL 336 E+ A R LK G+ Sbjct: 219 --ELIREALRVLKKGGKF 234 >UniRef50_C8X0Q8 Methyltransferase small n=2 Tax=Desulfovibrionales RepID=C8X0Q8_DESRD Length = 249 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 30/128 (23%) Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEF----- 285 +++DLG G GV+G L + P ++ VD +P VA++R N E R F Sbjct: 40 QVLDLGAGCGVVGFGLALRQPGIQLTGVDCNPEMVAAARENAARLGLE--QRAVFVEADA 97 Query: 286 -MINNALSGVEPFRFNAVLCNPPF-------------HQQ---------HALTDNVAWEM 322 ++ + + ++P F V+CNPP+ QQ HA + A+ + Sbjct: 98 ALVRDTATPLDPESFPLVVCNPPYRDPETGRSCNDAARQQARFAGKQGLHAFVEAAAYVL 157 Query: 323 FHHARRCL 330 + R CL Sbjct: 158 CNRGRLCL 165 >UniRef50_Q7VR73 Methylase of polypeptide chain release factors n=2 Tax=Candidatus Blochmannia RepID=Q7VR73_BLOFL Length = 281 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 6/101 (5%) Query: 224 LPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRC 283 +P+ +++DLG G G I L L + P + +D+ AV L ++ Sbjct: 107 IPDCNHLKVLDLGSGVGSIALALASERPTWNITGIDQQQQAVI---LAIKNQKSYKFRNV 163 Query: 284 EFMINNALSGVEPFRFNAVLCNPPF---HQQHALTDNVAWE 321 EF +N + ++ +F+ ++ NPP+ H H L+ ++ +E Sbjct: 164 EFKQSNWFTKIKKNKFHLIVSNPPYINEHDLHFLSQDIHFE 204 >UniRef50_Q0FGB0 HemK n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FGB0_9RHOB Length = 277 Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 3/83 (3%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 I+DLG G+G I L+LLD+ A V +D+S A+ ++ N N+ R F + N Sbjct: 112 ILDLGTGSGCIILSLLDEYKDAIGVGIDKSEDALNVAKQN--ANLLSLSQRVSFNLGNWC 169 Query: 292 SGVEPFRFNAVLCNPPFHQQHAL 314 G++ +F+ ++ NPP+ ++ + Sbjct: 170 EGIKE-KFDLIISNPPYISENDM 191 >UniRef50_Q03EK2 Methylase of polypeptide chain release factor n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03EK2_PEDPA Length = 283 Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 52/90 (57%), Gaps = 7/90 (7%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 ++D+G G+G I +TL + P+ V VD S A+ ++ N E++ EA+ +F + + Sbjct: 119 VLDIGTGSGDIAITLKLERPEWLVTAVDISKDALTVAQRNAESH--EAI--VDFRLGSLF 174 Query: 292 SGVEPFRFNAVLCNPPF---HQQHALTDNV 318 V+ RF+ ++ NPP+ +++H + +V Sbjct: 175 EPVQGERFDLIISNPPYIADNEKHEMDQSV 204 >UniRef50_C0WC25 Modification methylase n=1 Tax=Acidaminococcus sp. D21 RepID=C0WC25_9FIRM Length = 298 Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 3/86 (3%) Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 +I++LG G+G I ++LL K +A+ + VD S AVA +R N + N+ DR E ++++ Sbjct: 119 DILELGVGSGAILISLLLKRKEAQGLGVDISEGAVAVARKNAK-NLG-VTDRSEIIVSDL 176 Query: 291 LSGV-EPFRFNAVLCNPPFHQQHALT 315 V E +F+ ++ NPP+ + L Sbjct: 177 FEKVPEGRKFDLIVSNPPYIPKKDLA 202 >UniRef50_D2A1Q2 Putative uncharacterized protein GLEAN_07069-OG15489 (Fragment) n=2 Tax=Tribolium castaneum RepID=D2A1Q2_TRICA Length = 264 Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 11/118 (9%) Query: 233 VDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 292 ++L CG+G I L+LL + PQ K +D+S A+ L E L++ +I + L+ Sbjct: 113 LELCCGSGAIALSLLQERPQIKGTALDQSK---AACHLTKENAQKAGLNKRIRIIQSQLA 169 Query: 293 GVEPF-RFNAVLCNPPFHQQHALTD-----NVAWEMFHHARRCLKINGELYI-VANRH 343 +F+ ++ NPP+ Q AL V ++ + CL +NG+L++ V RH Sbjct: 170 QWHRCEKFDIIVSNPPYDLQ-ALDGGVDGLKVIKQILELSSECLNMNGKLFLEVEPRH 226 >UniRef50_C7PC96 Methyltransferase type 11 n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PC96_CHIPD Length = 252 Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 13/108 (12%) Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 +I+DLGCG G + + + AKV +D SP +AS++ E + F + +A Sbjct: 33 QILDLGCGTGELTAQVAESG--AKVTGLDSSPAMIASAK--------EHFPQVTFQVADA 82 Query: 291 LSGVEPFRFNAVLCNPPFH---QQHALTDNVAWEMFHHARRCLKINGE 335 S P +F+AV N H QQ D + + R L++ G+ Sbjct: 83 TSFSLPEQFDAVFSNATLHWIRQQEKALDRIHQHLKPGGRFVLEMGGK 130 >UniRef50_C3X2B7 Methyltransferase HemK MTase hemK n=2 Tax=Oxalobacter formigenes RepID=C3X2B7_OXAFO Length = 287 Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 4/89 (4%) Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEAL 280 + LPE G +VDLG G+G I + + P A+V D S A+ +R N + + Sbjct: 111 LARLPEG--GRVVDLGTGSGAIAVAIAAMRPDAQVWATDISGKALDIARKNAASCLKNG- 167 Query: 281 DRCEFMINNALSGVEP-FRFNAVLCNPPF 308 F N +EP RF+ ++ NPP+ Sbjct: 168 QSVRFRQGNWYEALEPGSRFDLIVSNPPY 196 >UniRef50_Q87DF7 Protein hemK homolog n=7 Tax=Xylella fastidiosa RepID=HEMK_XYLFT Length = 275 Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 3/88 (3%) Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEAL 280 +Q L E + DLG G+G I L + + PQA+V+ D S A+ + N + L Sbjct: 99 LQRLDHASERRVADLGTGSGAIALAIACERPQAQVLATDNSAAALDIAARNASAH---GL 155 Query: 281 DRCEFMINNALSGVEPFRFNAVLCNPPF 308 + F N + RF+ ++ NPP+ Sbjct: 156 NHVVFREGNWYEALLGERFDLIVSNPPY 183 >UniRef50_C2KUL6 Polypeptide chain release factor methyltransferase n=1 Tax=Oribacterium sinus F0268 RepID=C2KUL6_9FIRM Length = 346 Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 3/77 (3%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 I+DL G+G IG+++ P +++ VD S A+A ++ N E ++ E + ++ L Sbjct: 181 ILDLCTGSGCIGISVAKHLPYQELLLVDLSEKALAVAKKNAEKHLGE---NVRLLQSDLL 237 Query: 292 SGVEPFRFNAVLCNPPF 308 + V+ +F+ +L NPP+ Sbjct: 238 TAVQGKKFSLLLSNPPY 254 >UniRef50_B1MVN6 Methylase of polypeptide chain release factor n=4 Tax=Lactobacillales RepID=B1MVN6_LEUCK Length = 332 Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 ++D+G G+G I TL+ +NP+ + D S A+ + LN + + + F+ ++ Sbjct: 167 VLDIGTGSGAIIETLMLENPRVRGFAADISSDALTVAALNAQQ---LNIKQLRFVESDVF 223 Query: 292 SGVEPFRFNAVLCNPPF 308 SG+ RF+ ++ NPP+ Sbjct: 224 SGLADLRFDLIVSNPPY 240 >UniRef50_D2RKC9 Methyltransferase type 11 n=3 Tax=Clostridiales RepID=D2RKC9_ACIFE Length = 207 Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 57/137 (41%), Gaps = 18/137 (13%) Query: 212 GLDIG----ARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVAS 267 G+++G A++ M H P+ I+D+GCG G LL K A + +D SP++VA Sbjct: 25 GMNVGHARMAKWGMNHFPQMDPKTILDIGCGGGRNASELLKKYQNATLTAIDYSPLSVAK 84 Query: 268 SRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAW----EMF 323 ++ M + RC N +S PF N F A W F Sbjct: 85 TKAYNRRLMEQ--KRCIVQEANVVS--LPFE------NGAFDLATAFETIYFWPDLPRCF 134 Query: 324 HHARRCLKINGELYIVA 340 RR LK G IV+ Sbjct: 135 IEVRRILKNRGYFCIVS 151 >UniRef50_Q30QY4 Modification methylase HemK n=2 Tax=Campylobacterales RepID=Q30QY4_SULDN Length = 276 Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 4/91 (4%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 IV++G G+G+I + L P AK + VD S A+ +R N+E E DR E + L Sbjct: 118 IVEVGVGSGIISIILAKSLPNAKFIAVDISQAALGVARKNIEKFSLE--DRIELRHGSLL 175 Query: 292 SGVEPFRFNAVLCNPPF-HQQHALTDNVAWE 321 ++ + + ++ NPP+ +L N+++E Sbjct: 176 EPIKE-KIDYLVSNPPYIADDVSLESNLSYE 205 >UniRef50_C1XUR2 Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XUR2_9DEIN Length = 226 Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 6/82 (7%) Query: 224 LPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRC 283 LPE L I+DLGCGNG++ L L P A+V+ +D + + +R E + E L Sbjct: 23 LPERLR--ILDLGCGNGLLTLDLARAFPHAEVLGLDPTVSQIGLAR---ENHAKEPLGNV 77 Query: 284 EFMINNALSGVEP-FRFNAVLC 304 F + NA S + P RF+ V+ Sbjct: 78 RFAVGNAASQMLPGSRFDLVVM 99 >UniRef50_Q21JF1 16S rRNA m(2)G 1207 methyltransferase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21JF1_SACD2 Length = 361 Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 14/143 (9%) Query: 220 FMQHLPENL-EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN-MP 277 F++ NL E ++DLGCG+G + + + + ++ + D + AV +++ N+ TN + Sbjct: 211 FIKQRYNNLKEHTVLDLGCGSGYLSIAVKTLHCRS-LTATDNNAAAVLATQQNLITNNLA 269 Query: 278 EALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELY 337 EA ++ G+ F+ V+CNPPFH+ + ++ R L +GE Sbjct: 270 EAAQVVADDCAQSIQGM----FDLVVCNPPFHKGFETSRELSDLFLKSTARKLSKSGEAL 325 Query: 338 IVANRH-------LDYFHKLKKI 353 V N + YF +++K+ Sbjct: 326 FVVNSFIPLEKLAMPYFKQVEKL 348 >UniRef50_Q2LWV0 Peptide release factor-glutamine N5-methyltransferase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LWV0_SYNAS Length = 316 Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 3/78 (3%) Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 EI+DLG G+G I + L + P A++ D S A+A S N E + R F+ N Sbjct: 145 EILDLGTGSGAIAVALAHECPHARITATDISRKALAVSAGNAERH--GVASRITFLEGNL 202 Query: 291 LSGVEPFRFNAVLCNPPF 308 L V +F+ ++ NPP+ Sbjct: 203 LDPVMG-KFDVIVSNPPY 219 >UniRef50_B4WI79 Methyltransferase domain family n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WI79_9SYNE Length = 426 Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 23/127 (18%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGN 239 EP L +AP +W+ WT F PE I+D GCG Sbjct: 47 EPLLDEAPPGYNWR-----WT------------WPAAYSFCTGRKPETNSVRILDAGCGT 89 Query: 240 GVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE--PF 297 GV L+ NP+A+VV +D S A+A ++ + + DR F N ++ VE P Sbjct: 90 GVSTEYLVHLNPEAEVVGIDLSAGAIAVAKERCQRS---GADRASFY-NTSIYDVEQIPG 145 Query: 298 RFNAVLC 304 +F+ + C Sbjct: 146 KFDLINC 152 >UniRef50_C3YPG1 Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3YPG1_BRAFL Length = 287 Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 5/88 (5%) Query: 226 ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE-TNMPEALDRCE 284 E E I+++GCG+G I L+LL + PQA VD + AV ++ N E + + L+ + Sbjct: 115 EEEELGILEVGCGSGAISLSLLHEFPQAHCTAVDVTKEAVELTQHNAERLGLCDRLNIIK 174 Query: 285 FMINNALSGVEP----FRFNAVLCNPPF 308 F++ + V P +F+ ++ NPP+ Sbjct: 175 FIVLSLNDIVFPADFETKFDVIVSNPPY 202 >UniRef50_UPI000185CC67 protein-(glutamine-N5) methyltransferase, release factor-specific n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185CC67 Length = 287 Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 28/148 (18%) Query: 221 MQHLPE-NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN-MPE 278 +Q P+ N I+D+G G+G I ++L P++ V +D SP A+ ++ N + N + Sbjct: 106 LQTYPDKNYPLHILDIGTGSGCIPISLAKALPKSVVTAIDVSPKAITVAQRNADRNGVKI 165 Query: 279 ALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTD---NV-AWE------------- 321 +C+ + L P +++ ++ NPP+ ++ T+ NV ++E Sbjct: 166 QFLQCDILQTKTL----PQKYDVIISNPPYVRELEKTEMHSNVLSYEPHLALFVPNERPL 221 Query: 322 MFHH-----ARRCLKINGELYIVANRHL 344 +F+ A+R LK G L+ N++L Sbjct: 222 LFYEQIASLAQRYLKPEGSLFFEINQYL 249 >UniRef50_A5L887 Predicted O-methyltransferase (Fragment) n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5L887_9GAMM Length = 124 Score = 43.5 bits (101), Expect = 0.013, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 2/76 (2%) Query: 233 VDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 292 +D+G G G++ L + + +D P A+ ++ +N+E + + DR + L+ Sbjct: 47 LDIGTGTGLLALMAAQRFTDISISAIDIDPHAIEAATINIEQSPWQ--DRITLHNGSVLT 104 Query: 293 GVEPFRFNAVLCNPPF 308 P +F+A++CNPP+ Sbjct: 105 TDFPKKFDAIICNPPY 120 >UniRef50_Q164F9 Modification methylase, HemK family, putative n=3 Tax=Rhodobacteraceae RepID=Q164F9_ROSDO Length = 271 Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 ++DLG G+G + +TLL + P A V VD S A + N + E DR + + ++ Sbjct: 106 VLDLGVGSGCLIVTLLAERPDATGVAVDLSEAACLQASAN--AVLHEVADRVQVLKSDWF 163 Query: 292 SGVEPFRFNAVLCNPPF 308 VE RF+ ++ NPP+ Sbjct: 164 DAVE-GRFDLIVSNPPY 179 >UniRef50_UPI0000E0E154 peptide release factor-glutamine N5-methyltransferase n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0E154 Length = 286 Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 3/77 (3%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 ++DLG G G I L+++ + P+ +V+ VD P AV ++ N + P++ F ++ Sbjct: 117 VLDLGTGTGAIALSIILQRPELEVLGVDFVPEAVMLAQQNAQNLAPKS--NISFKQSDWF 174 Query: 292 SGVEPFRFNAVLCNPPF 308 S V+ RF+ ++ NPP+ Sbjct: 175 SHVDG-RFDVIVSNPPY 190 >UniRef50_B8CZ26 Modification methylase, HemK family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZ26_HALOH Length = 285 Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 1/78 (1%) Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVET-NMPEALDRCEFMINNA 290 IVD+G G+GVI ++L P A+V+ +D S A+ +R N++ N+ E + + + + Sbjct: 118 IVDVGTGSGVIAVSLAHYLPGARVLGIDISDKALEVARTNIKRHNLGERVKVIKGNLLDP 177 Query: 291 LSGVEPFRFNAVLCNPPF 308 L +E N V+ NPP+ Sbjct: 178 LIKMEKDNVNIVVSNPPY 195 >UniRef50_A5N3W1 Predicted methyltransferase n=2 Tax=Clostridium kluyveri RepID=A5N3W1_CLOK5 Length = 204 Score = 43.1 bits (100), Expect = 0.015, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%) Query: 217 ARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM 276 +++ H+ L+ ++D+GCG G L L + P+ KV +D SP++V S+ + Sbjct: 32 SKWGHSHISPGLDANVLDIGCGGGANLLLFLKRCPKGKVCGIDYSPVSVKHSQKKNRRYI 91 Query: 277 PEALDRCE 284 E RCE Sbjct: 92 EEG--RCE 97 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_D2A808 Putative uncharacterized protein n=2 Tax=Enterob... 562 e-159 UniRef50_B2VDD5 Ribosomal RNA large subunit methyltransferase G ... 488 e-136 UniRef50_A1JR10 Ribosomal RNA large subunit methyltransferase G ... 476 e-133 UniRef50_A1SX22 Ribosomal RNA large subunit methyltransferase G ... 432 e-119 UniRef50_Q3IHQ6 Ribosomal RNA large subunit methyltransferase G ... 428 e-118 UniRef50_Q6LTZ3 Ribosomal RNA large subunit methyltransferase G ... 420 e-116 UniRef50_Q15YR1 Ribosomal RNA large subunit methyltransferase G ... 420 e-116 UniRef50_UPI0000E0E42F Putative ribosomal RNA small subunit meth... 414 e-114 UniRef50_Q1K1R5 RRNA (Guanine-N(2)-)-methyltransferase n=2 Tax=P... 413 e-114 UniRef50_D1XLW4 rRNA (Guanine-N(2)-)-methyltransferase n=5 Tax=S... 412 e-113 UniRef50_A4VI28 Ribosomal RNA large subunit methyltransferase G ... 404 e-111 UniRef50_B0TR07 Ribosomal RNA large subunit methyltransferase G ... 404 e-111 UniRef50_Q488Q3 Ribosomal RNA large subunit methyltransferase G ... 402 e-110 UniRef50_B1VMX8 Ribosomal RNA large subunit methyltransferase G ... 398 e-109 UniRef50_Q4ZNG3 Ribosomal RNA large subunit methyltransferase G ... 395 e-108 UniRef50_A5F5X3 Ribosomal RNA large subunit methyltransferase G ... 393 e-108 UniRef50_A0YBC4 Putative ribosomal RNA small subunit methyltrans... 386 e-106 UniRef50_B4RZB4 Ribosomal RNA large subunit methyltransferase G ... 383 e-105 UniRef50_B5JW57 Ribosomal ribonucleate guanine-2-methyltransfera... 370 e-101 UniRef50_A0L9S5 Ribosomal RNA large subunit methyltransferase G ... 355 1e-96 UniRef50_Q0VPK2 Ribosomal RNA large subunit methyltransferase G ... 350 8e-95 UniRef50_Q1N4Z1 RRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=B... 336 6e-91 UniRef50_A4BHH5 Putative uncharacterized protein n=1 Tax=Reineke... 334 2e-90 UniRef50_A1U203 Methyltransferase small n=2 Tax=Marinobacter Rep... 329 1e-88 UniRef50_B7RVB2 Ribosomal protein L11 methyltransferase, putativ... 308 3e-82 UniRef50_B8H9N3 Methyltransferase small n=10 Tax=Actinomycetales... 292 1e-77 UniRef50_A3J9J3 Nucleotide methyltransferase, putative n=1 Tax=M... 286 1e-75 UniRef50_C4K8X0 Ribosomal RNA small subunit methyltransferase C ... 268 2e-70 UniRef50_A9WVF5 16S rRNA m(2)G 966 methyltransferase n=1 Tax=Ren... 267 5e-70 UniRef50_A7MUT5 Ribosomal RNA small subunit methyltransferase C ... 263 9e-69 UniRef50_D1BFL3 16S rRNA m(2)G 1207 methyltransferase n=7 Tax=Ba... 263 9e-69 UniRef50_C9NP08 Ribosomal RNA small subunit methyltransferase C ... 260 7e-68 UniRef50_Q7MZN0 Ribosomal RNA small subunit methyltransferase C ... 260 8e-68 UniRef50_A1SZ19 Ribosomal RNA small subunit methyltransferase C ... 259 1e-67 UniRef50_C5CBM4 16S RNA G1207 methylase RsmC n=2 Tax=Micrococcus... 257 5e-67 UniRef50_Q47VN0 Ribosomal RNA small subunit methyltransferase C ... 256 1e-66 UniRef50_D2T448 Ribosomal RNA small subunit methyltransferase n=... 255 2e-66 UniRef50_C4LB19 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=T... 253 7e-66 UniRef50_Q65S65 Ribosomal RNA small subunit methyltransferase C ... 253 8e-66 UniRef50_Q6FE96 Ribosomal RNA small subunit methyltransferase C ... 252 1e-65 UniRef50_C7R392 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=J... 252 2e-65 UniRef50_A6FBK7 16S RNA G1207 methylase RsmC n=1 Tax=Moritella s... 252 2e-65 UniRef50_C6APC6 Ribosomal RNA small subunit methyltransferase C ... 251 3e-65 UniRef50_Q2SJX3 Ribosomal RNA small subunit methyltransferase C ... 246 1e-63 UniRef50_D1YE28 Methyltransferase small domain protein n=3 Tax=P... 246 2e-63 UniRef50_Q1MZV1 Ribosomal RNA small subunit methyltransferase C ... 245 2e-63 UniRef50_B4S2L3 Ribosomal RNA small subunit methyltransferase C ... 245 2e-63 UniRef50_D0SZB9 16S RNA methylase RsmC n=1 Tax=Acinetobacter lwo... 245 2e-63 UniRef50_Q15ZS7 Ribosomal RNA small subunit methyltransferase C ... 240 4e-62 UniRef50_A3WQL8 16S RNA G1207 methylase RsmC n=1 Tax=Idiomarina ... 239 1e-61 UniRef50_UPI0000E105EB rRNA (guanine-N(2)-)-methyltransferase n=... 236 1e-60 UniRef50_Q3ILJ2 Ribosomal RNA small subunit methyltransferase C ... 235 1e-60 UniRef50_Q2NW11 Ribosomal RNA small subunit methyltransferase C ... 234 3e-60 UniRef50_A3D8E4 Ribosomal RNA small subunit methyltransferase C ... 233 9e-60 UniRef50_B5JVE3 Ribosomal RNA small subunit methyltransferase C ... 233 1e-59 UniRef50_D1BX92 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=X... 232 2e-59 UniRef50_A0KPP9 Ribosomal RNA small subunit methyltransferase C ... 232 2e-59 UniRef50_Q1QUF2 Ribosomal RNA small subunit methyltransferase C ... 229 1e-58 UniRef50_C7MEY2 16S RNA G1207 methylase RsmC n=1 Tax=Brachybacte... 227 7e-58 UniRef50_A6VRG3 Ribosomal RNA small subunit methyltransferase C ... 226 1e-57 UniRef50_A5VYJ3 Ribosomal RNA small subunit methyltransferase C ... 226 1e-57 UniRef50_Q1GDK1 Methyltransferase small n=13 Tax=Rhodobacteracea... 225 3e-57 UniRef50_Q0VP64 Ribosomal RNA small subunit methyltransferase C ... 223 9e-57 UniRef50_A1U204 Ribosomal RNA small subunit methyltransferase C ... 221 3e-56 UniRef50_Q5R049 Ribosomal RNA small subunit methyltransferase C ... 221 3e-56 UniRef50_C1ZEP1 16S RNA G1207 methylase RsmC n=1 Tax=Planctomyce... 219 1e-55 UniRef50_A4BC00 16S RNA G1207 methylase RsmC n=1 Tax=Reinekea bl... 218 3e-55 UniRef50_B6AVZ4 Methyltransferase small n=1 Tax=Rhodobacterales ... 213 8e-54 UniRef50_Q0C459 Putative methyltransferase n=1 Tax=Hyphomonas ne... 209 2e-52 UniRef50_P57413 Ribosomal RNA small subunit methyltransferase C ... 208 4e-52 UniRef50_A0NLD9 Ribosomal RNA small subunit methyltransferase C ... 205 2e-51 UniRef50_UPI000051043F putative methyltransferase n=1 Tax=Brevib... 205 3e-51 UniRef50_A9B5U4 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=H... 205 3e-51 UniRef50_C5QUQ6 16S rRNA methyltransferase n=3 Tax=Staphylococcu... 204 4e-51 UniRef50_C6XLQ7 Methyltransferase small n=1 Tax=Hirschia baltica... 204 4e-51 UniRef50_C0XSD5 Possible methyltransferase small n=1 Tax=Coryneb... 202 1e-50 UniRef50_Q3BNY2 Ribosomal RNA small subunit methyltransferase C ... 202 2e-50 UniRef50_Q67JT6 Putative uncharacterized protein n=1 Tax=Symbiob... 202 2e-50 UniRef50_A2BME9 Predicted Methyltransferase n=1 Tax=Hyperthermus... 197 5e-49 UniRef50_A8LQD1 Ribosomal RNA small subunit methyltransferase C ... 197 7e-49 UniRef50_A5IQ95 16S rRNA m(2)G 1207 methyltransferase n=53 Tax=S... 197 7e-49 UniRef50_A8R9R0 Putative uncharacterized protein n=1 Tax=Eubacte... 194 3e-48 UniRef50_A0LDZ4 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=M... 194 4e-48 UniRef50_B9Y2U0 Putative uncharacterized protein n=1 Tax=Holdema... 193 6e-48 UniRef50_A3V764 Methyltransferase, putative n=3 Tax=Rhodobactera... 191 3e-47 UniRef50_A4WPY7 16S rRNA m(2)G 1207 methyltransferase n=5 Tax=Rh... 191 3e-47 UniRef50_A3DJK4 Methyltransferase small n=3 Tax=Clostridium ther... 190 7e-47 UniRef50_P37872 Uncharacterized protein ybxB n=163 Tax=cellular ... 190 9e-47 UniRef50_Q11BC2 Methyltransferase small n=2 Tax=Phyllobacteriace... 190 1e-46 UniRef50_C8NTY6 Methyltransferase small domain protein n=1 Tax=C... 188 3e-46 UniRef50_D2MPQ8 Methyltransferase small domain protein n=1 Tax=B... 187 5e-46 UniRef50_B5KCF3 Possible ribosomal RNA small subunit methyltrans... 187 5e-46 UniRef50_Q72L94 Ribosomal RNA small subunit methyltransferase C ... 187 7e-46 UniRef50_C7LF42 Methyltransferase n=17 Tax=Brucella RepID=C7LF42... 186 1e-45 UniRef50_A3JNU9 Methyltransferase, putative n=1 Tax=Rhodobactera... 185 2e-45 UniRef50_Q28KG1 Methyltransferase small n=1 Tax=Jannaschia sp. C... 185 2e-45 UniRef50_A1B2V8 Methyltransferase small n=8 Tax=Rhodobacterales ... 185 3e-45 UniRef50_Q58292 Protein MJ0882 n=11 Tax=Methanococcales RepID=Y8... 184 5e-45 UniRef50_C6ABL9 Ribosomal RNA small subunit methyltransferase C ... 184 5e-45 UniRef50_Q2W4E3 16S RNA G1207 methylase RsmC n=3 Tax=Magnetospir... 183 7e-45 UniRef50_A6WWW0 Methyltransferase small n=21 Tax=Brucellaceae Re... 183 8e-45 UniRef50_C5NY36 Methyltransferase small n=1 Tax=Gemella haemolys... 181 4e-44 UniRef50_Q8TXG5 16S rRNA G1207 methylase n=1 Tax=Methanopyrus ka... 180 6e-44 UniRef50_Q02YD3 16S RNA G1207 methylase RsmC n=110 Tax=Bacilli R... 180 7e-44 UniRef50_Q0FA32 Methyltransferase, putative n=1 Tax=Rhodobactera... 179 1e-43 UniRef50_Q1IXW7 rRNA (Guanine-N(2)-)-methyltransferase n=3 Tax=D... 179 2e-43 UniRef50_Q045V2 16S RNA G1207 methylase RsmC n=22 Tax=Bacilli Re... 177 7e-43 UniRef50_D2LVZ2 Methyltransferase small n=1 Tax=Bacillus cellulo... 177 7e-43 UniRef50_C5BI28 RNA methyltransferase, RsmC family n=1 Tax=Tered... 177 8e-43 UniRef50_B6YSP9 Ribosomal RNA small subunit methyltransferase C ... 177 9e-43 UniRef50_Q89AI2 Ribosomal RNA small subunit methyltransferase C ... 176 1e-42 UniRef50_A0YF73 16S ribosomal RNA m2G1207 methyltransferase n=1 ... 175 2e-42 UniRef50_UPI0000382BBF COG2813: 16S RNA G1207 methylase RsmC n=1... 175 3e-42 UniRef50_C3RJV2 16S rRNA m(2)G 1207 methyltransferase n=4 Tax=Ba... 175 3e-42 UniRef50_B0UBH2 Methyltransferase small n=17 Tax=Alphaproteobact... 173 6e-42 UniRef50_D2R2V9 Methyltransferase small n=1 Tax=Pirellula staley... 173 8e-42 UniRef50_A1AW50 Methyltransferase small n=5 Tax=Gammaproteobacte... 172 2e-41 UniRef50_A9KTA1 Methyltransferase small n=3 Tax=Firmicutes RepID... 172 2e-41 UniRef50_C8WTY2 Methyltransferase small n=2 Tax=Alicyclobacillus... 172 2e-41 UniRef50_Q1YVK1 RsmC protein n=1 Tax=gamma proteobacterium HTCC2... 171 3e-41 UniRef50_C1A9K7 rRNA methyltransferase n=1 Tax=Gemmatimonas aura... 171 3e-41 UniRef50_Q9V1A1 Ribosomal RNA small subunit methyltransferase C ... 170 6e-41 UniRef50_C7NCQ1 Methyltransferase small n=5 Tax=Fusobacteriaceae... 169 2e-40 UniRef50_A8F736 Methyltransferase small n=1 Tax=Thermotoga letti... 168 3e-40 UniRef50_Q057M1 Ribosomal RNA small subunit methyltransferase C ... 167 4e-40 UniRef50_UPI00016C52FC methyltransferase small n=1 Tax=Gemmata o... 167 6e-40 UniRef50_B1MVU0 16S RNA G1207 methylase RsmC n=11 Tax=Lactobacil... 165 2e-39 UniRef50_B8D5U1 Ribosomal RNA small subunit methyltransferase C ... 165 2e-39 UniRef50_D2RAI3 Methyltransferase small domain protein n=27 Tax=... 165 3e-39 UniRef50_A3DND7 Methyltransferase small n=1 Tax=Staphylothermus ... 164 4e-39 UniRef50_A8A8U2 Methyltransferase small n=1 Tax=Ignicoccus hospi... 164 4e-39 UniRef50_C4FY86 Putative uncharacterized protein n=1 Tax=Catonel... 164 4e-39 UniRef50_C2KPF6 Possible 16S rRNA methyltransferase n=4 Tax=Acti... 164 5e-39 UniRef50_B3PHG8 Putative ribosomal RNA small subunit methyltrans... 163 7e-39 UniRef50_A3K8H8 Methyltransferase, putative n=5 Tax=Rhodobactera... 163 1e-38 UniRef50_B8I811 Methyltransferase small n=2 Tax=Clostridium RepI... 162 2e-38 UniRef50_D2PU49 Methyltransferase small n=2 Tax=Actinomycetales ... 162 2e-38 UniRef50_C8P1I9 Methyltransferase domain protein n=1 Tax=Erysipe... 161 4e-38 UniRef50_A6UF35 Methyltransferase small n=17 Tax=Rhizobiales Rep... 161 5e-38 UniRef50_Q0FKY0 Methyltransferase, putative n=1 Tax=Roseovarius ... 160 5e-38 UniRef50_A5WBH5 Methyltransferase small n=5 Tax=Gammaproteobacte... 160 7e-38 UniRef50_C7RA23 Methyltransferase small n=3 Tax=Gammaproteobacte... 160 1e-37 UniRef50_C1YW37 16S RNA G1207 methylase RsmC n=1 Tax=Nocardiopsi... 158 4e-37 UniRef50_A4YCT3 Methyltransferase small n=13 Tax=Sulfolobaceae R... 157 6e-37 UniRef50_A6DL01 Putative uncharacterized protein n=1 Tax=Lentisp... 157 7e-37 UniRef50_C7R3H0 Methyltransferase small n=2 Tax=Micrococcineae R... 156 1e-36 UniRef50_A9BIP2 Methyltransferase small n=11 Tax=Thermotogaceae ... 156 2e-36 UniRef50_D0U5Y8 16S RNA G1207 methylase RsmC n=1 Tax=uncultured ... 155 2e-36 UniRef50_B8I4M1 Methyltransferase small n=2 Tax=Bacteria RepID=B... 155 3e-36 UniRef50_C0QWV8 Methyltransferase small domain protein n=2 Tax=B... 155 3e-36 UniRef50_Q6AE06 Putative uncharacterized protein n=1 Tax=Leifson... 153 8e-36 UniRef50_D1A2Z3 Methyltransferase small n=2 Tax=Streptosporangin... 153 1e-35 UniRef50_B7CDV5 Putative uncharacterized protein n=1 Tax=Eubacte... 150 7e-35 UniRef50_C0W0F2 Possible 16S rRNA methyltransferase n=1 Tax=Acti... 148 3e-34 UniRef50_B5GW92 Methyltransferase n=1 Tax=Streptomyces clavulige... 148 4e-34 UniRef50_A9WGP8 Methyltransferase small n=5 Tax=Chloroflexaceae ... 146 2e-33 UniRef50_Q47PA1 16S rRNA m(2)G 1207 methyltransferase n=1 Tax=Th... 144 6e-33 UniRef50_Q7UM12 Probable ribosomal RNA small subunit methyltrans... 136 1e-30 UniRef50_UPI0000E87AD9 modification methylase, HemK family prote... 120 1e-25 UniRef50_B7I872 Ribosomal RNA small subunit methyltransferase C ... 119 1e-25 UniRef50_C4V130 Putative uncharacterized protein n=2 Tax=Selenom... 115 4e-24 UniRef50_C8P9J5 Protein-(Glutamine-N5) methyltransferase n=1 Tax... 110 1e-22 UniRef50_Q1II29 Modification methylase, HemK family n=1 Tax=Cand... 107 6e-22 UniRef50_C5RF40 Methyltransferase type 11 n=1 Tax=Clostridium ce... 106 2e-21 UniRef50_C1F2J0 Ribosomal protein L11 methyltransferase n=1 Tax=... 103 8e-21 UniRef50_B7KNT6 Methyltransferase small n=17 Tax=cellular organi... 102 2e-20 UniRef50_A6G0Z3 Modification methylase HemK n=1 Tax=Plesiocystis... 101 3e-20 UniRef50_Q0AHU0 Modification methylase, HemK family protein n=5 ... 101 4e-20 UniRef50_B8KG51 Protein-(Glutamine-N5) methyltransferase, riboso... 101 5e-20 UniRef50_A5EWT8 Modification methylase, HemK family n=2 Tax=Card... 100 7e-20 UniRef50_Q93NC8 Protoporphyrinogen oxidase HemK n=3 Tax=Myxococc... 100 1e-19 UniRef50_D1R4W7 Putative uncharacterized protein n=1 Tax=Parachl... 100 1e-19 UniRef50_B3E629 Protein-(Glutamine-N5) methyltransferase, releas... 100 2e-19 UniRef50_A5EV99 Modification methylase, HemK family n=2 Tax=Card... 98 5e-19 UniRef50_B9XCI6 Protein-(Glutamine-N5) methyltransferase, releas... 98 5e-19 UniRef50_A2SU41 Methyltransferase type 11 n=4 Tax=Euryarchaeota ... 97 9e-19 UniRef50_C6NTA1 Hypothetical adenine-specific methylase yfcB n=1... 97 1e-18 UniRef50_Q5WAJ4 Putative uncharacterized protein n=1 Tax=Bacillu... 96 2e-18 UniRef50_Q15SR0 Modification methylase, HemK family n=8 Tax=cell... 96 2e-18 UniRef50_Q0HYK7 Modification methylase, HemK family n=17 Tax=Alt... 96 2e-18 UniRef50_Q1GYE6 Modification methylase, HemK family n=1 Tax=Meth... 95 4e-18 UniRef50_A8TJ19 Predicted O-methyltransferase n=1 Tax=alpha prot... 92 3e-17 UniRef50_B9KCF8 Putative uncharacterized protein n=1 Tax=Campylo... 91 6e-17 UniRef50_C6XAY7 Modification methylase, HemK family n=18 Tax=cel... 91 8e-17 Sequences not found previously or not previously below threshold: UniRef50_Q2BHC0 Probable ribosomal RNA small subunit methyltrans... 162 2e-38 UniRef50_Q21JF1 16S rRNA m(2)G 1207 methyltransferase n=1 Tax=Sa... 161 4e-38 UniRef50_A1SNI3 Methyltransferase small n=4 Tax=Actinomycetales ... 146 1e-33 UniRef50_C5C9V8 16S rRNA m(2)G 1207 methyltransferase n=17 Tax=A... 135 4e-30 UniRef50_D0WQY8 Putative methyltransferase small domain protein ... 132 2e-29 UniRef50_A4RYF4 Predicted protein n=1 Tax=Ostreococcus lucimarin... 127 7e-28 UniRef50_A9NEL6 Ribosomal RNA small subunit methyltransferase C ... 126 9e-28 UniRef50_C7NJ77 16S rRNA m(2)G 1207 methyltransferase n=1 Tax=Ky... 113 8e-24 UniRef50_A6CDL7 Probable ribosomal RNA small subunit methyltrans... 112 3e-23 UniRef50_C1E0X9 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 108 5e-22 UniRef50_D0MJN4 Modification methylase, HemK family n=1 Tax=Rhod... 103 8e-21 UniRef50_C3X2B7 Methyltransferase HemK MTase hemK n=2 Tax=Oxalob... 103 2e-20 UniRef50_B0MTH4 Putative uncharacterized protein n=1 Tax=Alistip... 100 2e-19 UniRef50_Q1N3L9 Modification methylase, HemK family protein n=1 ... 99 2e-19 UniRef50_A3ZUD0 HemK protein n=1 Tax=Blastopirellula marina DSM ... 99 3e-19 UniRef50_D1Y1C6 Methyltransferase, UbiE/COQ5 family n=1 Tax=Pyra... 98 4e-19 UniRef50_A1ATD2 Modification methylase, HemK family n=3 Tax=Bact... 98 6e-19 UniRef50_Q9I347 Uncharacterized adenine-specific methylase PA167... 98 6e-19 UniRef50_Q1J6M0 Peptide release factor-glutamine N5-methyltransf... 97 7e-19 UniRef50_Q9CNN7 Uncharacterized adenine-specific methylase PM039... 97 1e-18 UniRef50_A4XUP5 Methyltransferase small n=18 Tax=cellular organi... 97 1e-18 UniRef50_C4DP23 Methylase of polypeptide chain release factors n... 96 2e-18 UniRef50_C6XB21 Methyltransferase small n=1 Tax=Methylovorus sp.... 96 2e-18 UniRef50_B5EL90 Protein-(Glutamine-N5) methyltransferase, riboso... 96 3e-18 UniRef50_D1YVR2 Putative methyltransferase n=1 Tax=Methanocella ... 96 3e-18 UniRef50_O27384 Methyltransferase related protein n=4 Tax=Methan... 95 3e-18 UniRef50_A6G5N4 Probable ribosomal RNA small subunit methyltrans... 95 3e-18 UniRef50_D0KYC7 Protein-(Glutamine-N5) methyltransferase, riboso... 95 4e-18 UniRef50_C3YPG1 Putative uncharacterized protein (Fragment) n=1 ... 95 4e-18 UniRef50_B2KCR7 Methyltransferase type 11 n=1 Tax=Elusimicrobium... 95 5e-18 UniRef50_Q4UJU4 tRNA (guanine-N(7)-)-methyltransferase n=11 Tax=... 95 5e-18 UniRef50_Q21AW1 Modification methylase, HemK family n=82 Tax=Pro... 95 6e-18 UniRef50_C0GGF2 Protein-(Glutamine-N5) methyltransferase, releas... 94 8e-18 UniRef50_Q04KR3 HemK protein n=48 Tax=Streptococcus RepID=Q04KR3... 94 1e-17 UniRef50_Q58338 Uncharacterized protein MJ0928 n=12 Tax=Methanoc... 93 1e-17 UniRef50_D1N6A4 Protein-(Glutamine-N5) methyltransferase, releas... 93 1e-17 UniRef50_Q30X17 Modification methylase, HemK family n=1 Tax=Desu... 93 1e-17 UniRef50_D2EKA3 Putative uncharacterized protein n=1 Tax=Pedioco... 93 1e-17 UniRef50_A5VIP7 Modification methylase, HemK family n=13 Tax=Lac... 93 1e-17 UniRef50_Q0FGB0 HemK n=1 Tax=Rhodobacterales bacterium HTCC2255 ... 93 1e-17 UniRef50_A3EUN2 Modification methylase (HemK) n=2 Tax=Leptospiri... 93 1e-17 UniRef50_Q87DF7 Protein hemK homolog n=7 Tax=Xylella fastidiosa ... 93 1e-17 UniRef50_UPI0001AF32B2 N-methyl-transferase related protein n=1 ... 93 2e-17 UniRef50_UPI00016C59E8 modification methylase, HemK family prote... 93 2e-17 UniRef50_Q04XZ4 Methylase of polypeptide chain release factors n... 93 2e-17 UniRef50_C6QEV8 Modification methylase, HemK family n=1 Tax=Hyph... 93 2e-17 UniRef50_A6GMB8 Modification methylase, HemK family protein n=1 ... 93 2e-17 UniRef50_Q7NJS7 Protoporphyrinogen oxidase n=1 Tax=Gloeobacter v... 93 2e-17 UniRef50_C0EX94 Putative uncharacterized protein n=1 Tax=Eubacte... 92 2e-17 UniRef50_Q2LWV0 Peptide release factor-glutamine N5-methyltransf... 92 2e-17 UniRef50_C5JB08 Modification methylase, HemK family n=1 Tax=uncu... 92 3e-17 UniRef50_C3JBW4 SmtA protein n=2 Tax=Bacteria RepID=C3JBW4_9PORP 92 3e-17 UniRef50_Q470C2 Modification methylase HemK n=11 Tax=Burkholderi... 92 3e-17 UniRef50_D1QW15 Methyltransferase domain protein n=2 Tax=Bacteri... 92 4e-17 UniRef50_C0W268 Putative uncharacterized protein n=1 Tax=Actinom... 92 4e-17 UniRef50_D0KZK8 Protein-(Glutamine-N5) methyltransferase, releas... 92 4e-17 UniRef50_Q0AC10 Modification methylase, HemK family n=8 Tax=Prot... 92 4e-17 UniRef50_C2KUL6 Polypeptide chain release factor methyltransfera... 92 4e-17 UniRef50_Q5ZT28 Protein methyltransferase HemK n=6 Tax=Legionell... 92 5e-17 UniRef50_Q2MG72 Putative gentamicin methyltransferase n=2 Tax=Mi... 92 5e-17 UniRef50_A4XJN0 Modification methylase, HemK family n=2 Tax=Clos... 91 6e-17 UniRef50_Q9KQ83 Uncharacterized adenine-specific methylase VC_21... 91 6e-17 UniRef50_Q8TVA1 Predicted rRNA/ tRNA methylase n=1 Tax=Methanopy... 91 7e-17 UniRef50_A9N9K3 Protein methyltransferase HemK n=6 Tax=Coxiella ... 91 7e-17 UniRef50_C6X4E9 Putative protoporphyrinogen oxidase n=1 Tax=Flav... 91 8e-17 UniRef50_A9IMM0 Methylase n=5 Tax=Bartonella RepID=A9IMM0_BART1 90 1e-16 >UniRef50_D2A808 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=D2A808_SHIF2 Length = 481 Score = 562 bits (1448), Expect = e-159, Method: Composition-based stats. Identities = 374/378 (98%), Positives = 375/378 (99%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSC 60 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEI GPVLILNDAFGALSC Sbjct: 104 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEILGPVLILNDAFGALSC 163 Query: 61 ALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL 120 ALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL Sbjct: 164 ALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL 223 Query: 121 LEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE 180 LEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE Sbjct: 224 LEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE 283 Query: 181 PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG 240 P LADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG Sbjct: 284 PPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG 343 Query: 241 VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFN 300 VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDR EFMINNALSGVEPFRFN Sbjct: 344 VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRSEFMINNALSGVEPFRFN 403 Query: 301 AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTI 360 AVLCNPPFHQQHALTDNVAWEMFH+ARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTI Sbjct: 404 AVLCNPPFHQQHALTDNVAWEMFHYARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTI 463 Query: 361 ATNNKFVVLKAVKLGRRR 378 ATNNKFVVLKAVKLGRRR Sbjct: 464 ATNNKFVVLKAVKLGRRR 481 >UniRef50_B2VDD5 Ribosomal RNA large subunit methyltransferase G n=6 Tax=Enterobacteriaceae RepID=RLMG_ERWT9 Length = 375 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 242/374 (64%), Positives = 299/374 (79%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSC 60 MS L+ R LTL RFP + +PLQAW+AADEYLL LD+ + GP LI ND FGAL+C Sbjct: 1 MSQLELSNRMLTLHRFPQMREESPLQAWDAADEYLLNHLDNLPVNGPTLIFNDTFGALAC 60 Query: 61 ALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL 120 ALA +SI DS++++ ATR+NL LN +DE V+ LDS A P P VLIKVPKTLAL Sbjct: 61 ALAGEGVWSISDSWLNQQATRQNLALNQLDEGDVRLLDSLAPLPGAPARVLIKVPKTLAL 120 Query: 121 LEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE 180 LE+QLRALR VVT +T+I+A KA++IHTSTL+LFEK+LGPTTT+LAWKKARLI TF + Sbjct: 121 LEKQLRALRAVVTPETQIVAAGKAKEIHTSTLQLFEKILGPTTTSLAWKKARLIYATFTQ 180 Query: 181 PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG 240 P+LA++ W L+GT W IHNHANVF+R GLDIGARFFMQHLP++++GEIVDLGCGNG Sbjct: 181 PELAESEVISRWPLDGTPWQIHNHANVFARGGLDIGARFFMQHLPDDIDGEIVDLGCGNG 240 Query: 241 VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFN 300 VIGL L +NP A+V F+DES MAVASSR+NVE N P+ L RCEF +NNAL+G R + Sbjct: 241 VIGLMALRQNPLAQVHFLDESYMAVASSRMNVELNCPDDLARCEFRVNNALAGYPSDRLH 300 Query: 301 AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTI 360 AVLCNPPFHQQ+A+TD++AW+MF ARRCL+ GEL IV NRHLDY+HK+KK+FGNCTT+ Sbjct: 301 AVLCNPPFHQQNAVTDHIAWQMFRDARRCLQYGGELRIVGNRHLDYYHKMKKLFGNCTTV 360 Query: 361 ATNNKFVVLKAVKL 374 AT+ KFV+L++VK+ Sbjct: 361 ATHQKFVILRSVKM 374 >UniRef50_A1JR10 Ribosomal RNA large subunit methyltransferase G n=143 Tax=Bacteria RepID=RLMG_YERE8 Length = 396 Score = 476 bits (1226), Expect = e-133, Method: Composition-based stats. Identities = 233/377 (61%), Positives = 291/377 (77%), Gaps = 2/377 (0%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRG-PVLILNDAFGALS 59 MS + G +S L+RFP ++ N LQAWEAADEYLLQ +D +I G PVL+ ND FG L+ Sbjct: 1 MSQVLLGTQSFELERFPPQENSNTLQAWEAADEYLLQNIDLNQIDGRPVLVFNDQFGTLT 60 Query: 60 CALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLA 119 CAL ++P+S+ DSY+S+LAT NLRLN +DE V L S P+ P +V+IK+PK LA Sbjct: 61 CALHAYRPFSVSDSYMSQLATAHNLRLNHLDEDVVTLLSSMDALPEAPKLVVIKIPKALA 120 Query: 120 LLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFN 179 LLE QLRALR+VV DT IIAGAK+RD+H STL+LFEK+LGPT TTLAWKKARLI+C Sbjct: 121 LLEHQLRALRRVVAPDTVIIAGAKSRDVHNSTLQLFEKILGPTKTTLAWKKARLIHCEVA 180 Query: 180 E-PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCG 238 + P +AP+TV W L T++ IHNHANVFSR LDIGARFFM+ LP ++EG+I DLGCG Sbjct: 181 DIPLAEEAPETVDWPLANTEYVIHNHANVFSRNNLDIGARFFMEILPYDVEGKIADLGCG 240 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 NGV+GL L++NP A+++FVDES MAVASS LN+ N P+ L RCEFM+++ L+GVE Sbjct: 241 NGVVGLIALEQNPLAEMLFVDESYMAVASSELNITYNRPQDLSRCEFMVSHGLAGVERES 300 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCT 358 VLCNPPFHQQHA++D+VAW+MF A+RCLK+ GEL IV NRHLDYFHKLK++FGNC Sbjct: 301 LQLVLCNPPFHQQHAVSDHVAWQMFCDAKRCLKVGGELMIVGNRHLDYFHKLKRLFGNCE 360 Query: 359 TIATNNKFVVLKAVKLG 375 T+ +N KF+VLKAVK Sbjct: 361 TLDSNQKFMVLKAVKTA 377 >UniRef50_A1SX22 Ribosomal RNA large subunit methyltransferase G n=3 Tax=Alteromonadales RepID=RLMG_PSYIN Length = 382 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 165/379 (43%), Positives = 246/379 (64%), Gaps = 8/379 (2%) Query: 4 LDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGP------VLILNDAFGA 57 L+ ++L L R P + LQAW++ADEYL+ + E++ +L++ND+FGA Sbjct: 5 LNIADQTLVLHRHPRIKN-ETLQAWDSADEYLINYFSENELQKQLNENEQILLVNDSFGA 63 Query: 58 LSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKT 117 L+C L + + DSY+S + + N++ N E ++ DS +P+ +VLIK+PKT Sbjct: 64 LTCYLQAFQRTVVSDSYLSINSIKLNMQRNRCPEENLLLQDSLQQFPENVKIVLIKIPKT 123 Query: 118 LALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCT 177 L+ LE+ L+ L V+T +T ++A K IH STL+LFEK +G T T+LA KK+RLI Sbjct: 124 LSYLEEMLQKLHAVITPETIVVAAGKVNMIHNSTLDLFEKYIGTTKTSLAKKKSRLIFSL 183 Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGC 237 ++ + ++W++E DW IHNHANVFSR LDIG RF M +LP+ ++VDLGC Sbjct: 184 PIIKEVPEKEIAITWEIEKLDWKIHNHANVFSRNHLDIGGRFLMDNLPKGDFSKVVDLGC 243 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP-EALDRCEFMINNALSGVEP 296 GNG+IG+ P+A++ F+DES M++ S+R+N++ N+P E + F++NN L G +P Sbjct: 244 GNGIIGMAASAAYPKAQITFIDESYMSIDSARINMQKNLPEEQAENARFVVNNGLVGFKP 303 Query: 297 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGN 356 ++ +LCNPPFHQQ +TD +AW MF+ A CL NGEL IV N HL+Y KL++IFGN Sbjct: 304 RSYDLILCNPPFHQQQTITDQIAWSMFNDAHFCLVDNGELVIVGNHHLNYQDKLERIFGN 363 Query: 357 CTTIATNNKFVVLKAVKLG 375 C ++ N KFV+L+AVK+ Sbjct: 364 CEIVSQNKKFVILRAVKMD 382 >UniRef50_Q3IHQ6 Ribosomal RNA large subunit methyltransferase G n=7 Tax=Gammaproteobacteria RepID=RLMG_PSEHT Length = 382 Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 185/375 (49%), Positives = 242/375 (64%), Gaps = 5/375 (1%) Query: 3 HLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIR-GPVLILNDAFGALSCA 61 G ++ TL+RFP LQAW++ADEYL+ + + +LILND+FGALSC Sbjct: 4 QAQLGDKTFTLERFPLDQKNRSLQAWDSADEYLIDYVSEHHPDCRSLLILNDSFGALSCY 63 Query: 62 LAEHK--PYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLA 119 + + S+ DSYIS A NL N I + LDS + P+Q +VLIKVP+TL Sbjct: 64 FSHKQLTVCSVNDSYISHQAAAYNLAENKIPAITFSQLDSLSALPEQVDLVLIKVPRTLG 123 Query: 120 LLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFN 179 L+ QL L +V+ T +IA AK +D+H ST++ FE+ +G T T+LA KK+RLI + Sbjct: 124 FLQYQLSELSEVLAPGTPVIAAAKTKDVHNSTIKAFEQFIGETKTSLAVKKSRLII-SHA 182 Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE-IVDLGCG 238 + A V+W LEGTD+TI NHANVFSR LDIGARFF +LPE + + I+DLGCG Sbjct: 183 QGGYKAADFPVNWPLEGTDFTISNHANVFSRDSLDIGARFFFNYLPETNKAKSIIDLGCG 242 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 NGV+GL L + P A + FVDES MAV S+RLNVE NM ++C F+ N+ LSG E Sbjct: 243 NGVVGLMALSRCPNANITFVDESYMAVESARLNVELNMEAKYEQCSFVENDCLSGFERDS 302 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCT 358 + VLCNPPFHQ A+TD++AW+MF A+ LK GEL I+ NRHLDY KL ++FGNC Sbjct: 303 VDMVLCNPPFHQAQAVTDHIAWQMFKEAKDTLKEGGELRIIGNRHLDYHDKLNRMFGNCK 362 Query: 359 TIATNNKFVVLKAVK 373 + +N KFVVL A K Sbjct: 363 LLGSNKKFVVLSATK 377 >UniRef50_Q6LTZ3 Ribosomal RNA large subunit methyltransferase G n=2 Tax=Photobacterium profundum RepID=RLMG_PHOPR Length = 374 Score = 420 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 167/376 (44%), Positives = 234/376 (62%), Gaps = 8/376 (2%) Query: 2 SHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEI--RGPVLILNDAFGALS 59 L R+L L RFP + LQAW+AADEYL+ D E+ + P+LILND+FGALS Sbjct: 3 PALTLHDRTLKLNRFPIRK-IETLQAWDAADEYLINHTHDMELDPQRPILILNDSFGALS 61 Query: 60 CALAEHK-PYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTL 118 C AE ++ DS++++ NL N + SV +D A+ P+ P +VLIK+PK Sbjct: 62 CWFAERANVTTVTDSFVAKQGCIANLTANQL--PSVNIIDCLAELPKNPQLVLIKLPKNN 119 Query: 119 ALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTF 178 LL QL+ L ++ D R+I AK +DIHTSTL+L +K LG T T+LA KKARL+ Sbjct: 120 RLLTWQLQQLCHLLPEDCRVIGAAKVKDIHTSTLKLCDKYLGETKTSLAVKKARLVFIKP 179 Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE-IVDLGC 237 N P+ +W + + NHANVFS LDIGAR + H+P++ + + I+DLGC Sbjct: 180 NASLAKPMPEAKAWDVPEHGIRLSNHANVFSGESLDIGARLLLNHIPQDFKYKDIIDLGC 239 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 GNGVIG+ +NPQAK+ VDES MA AS N + N EA ++ ++ + L+ +E Sbjct: 240 GNGVIGIKAARRNPQAKITCVDESFMAAASCTENAKQN-LEAPEQLTAIVTDCLADIEHS 298 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNC 357 + VLCNPPFHQQ +TD++AW+MF A++ L+ GEL ++ NR L Y KLK++FGN Sbjct: 299 SADLVLCNPPFHQQTTITDHIAWQMFCDAKQVLRPKGELIVIGNRQLGYDDKLKRLFGNV 358 Query: 358 TTIATNNKFVVLKAVK 373 IA N+KF+V ++VK Sbjct: 359 EIIAQNDKFIVYQSVK 374 >UniRef50_Q15YR1 Ribosomal RNA large subunit methyltransferase G n=6 Tax=Gammaproteobacteria RepID=RLMG_PSEA6 Length = 384 Score = 420 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 178/381 (46%), Positives = 245/381 (64%), Gaps = 9/381 (2%) Query: 2 SHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDD--TEIRG-PVLILNDAFGAL 58 + L S L R+PA + QAW++ADEYL++ + T++ G + I ND FGAL Sbjct: 3 TELTLLDHSYELLRYPAENQHVSWQAWDSADEYLMEYVAQNITDLNGLNIHIYNDDFGAL 62 Query: 59 SCALA-EHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKT 117 A + P I DS+++ A NL N + +V +S Q+ +VLIKVPKT Sbjct: 63 GVWFATNNAPLWISDSFVAHKALALNLERNHLPIENVNVQNSLYKANQKADLVLIKVPKT 122 Query: 118 LALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCT 177 LALLEQQL L+ VT +TRIIA KA I STL LFEK LG TTT+LA KK+RLI C Sbjct: 123 LALLEQQLIDLQSSVTPETRIIAAGKANAIQKSTLALFEKHLGLTTTSLAKKKSRLIFCQ 182 Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGC 237 ++ + + +P WK + T + + N ANVFSR LDIGAR + HLP+ IVDLGC Sbjct: 183 YDGVKQSVSPYPTKWKTDNTQFIMSNLANVFSRQQLDIGARVLLAHLPDANHKCIVDLGC 242 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL-----S 292 GNGV+GL +L K+P A V+FVDES MA+AS+++N+E NMP+ LD+C+F+++N L S Sbjct: 243 GNGVLGLHVLHKSPGAHVIFVDESFMAIASAKMNIEQNMPDKLDQCKFIVSNCLDECLSS 302 Query: 293 GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKK 352 G + VLCNPPFHQQ+ +TD++A +MF ++R LK GEL +V NRHLDY +K+ Sbjct: 303 GENEATVDIVLCNPPFHQQNTITDHIALQMFKDSKRILKHAGELRVVGNRHLDYPQTIKR 362 Query: 353 IFGNCTTIATNNKFVVLKAVK 373 +FG+ +A++ KF +L A+K Sbjct: 363 LFGHYKVLASDRKFSILSAIK 383 >UniRef50_UPI0000E0E42F Putative ribosomal RNA small subunit methyltransferase D (rRNA (guanine-N(2)-)-methyltransferase) (16S rRNA m2G966 n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0E42F Length = 388 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 167/385 (43%), Positives = 228/385 (59%), Gaps = 8/385 (2%) Query: 2 SHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLD-------DTEIRGPVLILNDA 54 + + + TL R+PA LQAW+A DEY++ + D + ILND Sbjct: 3 TEFTHARGTHTLVRYPAEHQHKSLQAWDAVDEYIISYVQANYTDLLDNITPQRMAILNDD 62 Query: 55 FGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKV 114 FGAL+CA KP I DS++++L R NL+ N +D +S++F+ ST Q +VL+++ Sbjct: 63 FGALTCAFQACKPVHISDSFVAQLGARHNLQQNDLDSASIEFIASTDKLSQTFDIVLMQL 122 Query: 115 PKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLI 174 PK LALL QL LR DT IIAG K + + +LF +LG T+LA KK+RL+ Sbjct: 123 PKNLALLTYQLHQLRDCTHPDTIIIAGGKVPVVTKNVQQLFNTILGDCHTSLAAKKSRLV 182 Query: 175 NCTFNEPQLADAPQTV-SWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIV 233 + N +W++ + + NVFSR LDIGARF MQHLP +V Sbjct: 183 IGSVNNALTPPPLTPWNTWEITKPVLQLSHLPNVFSRLHLDIGARFLMQHLPLIEGEHVV 242 Query: 234 DLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG 293 DLGCGNGVIG T+L P AKV FVDES MA+ S++ NV+ N PE +C+F++ N LS Sbjct: 243 DLGCGNGVIGCTVLADAPNAKVTFVDESYMAIESAKRNVQDNFPEQYAQCDFVVANCLSQ 302 Query: 294 VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKI 353 V+ + VLCNPPFHQQ+A+TD++AW+MF A++ L+ GEL I+ NRHL Y + LKK Sbjct: 303 VDLEHVDLVLCNPPFHQQNAVTDHIAWQMFKDAKQVLRHGGELRIIGNRHLPYGNMLKKR 362 Query: 354 FGNCTTIATNNKFVVLKAVKLGRRR 378 +G T IATN KF +L K R Sbjct: 363 YGGFTVIATNAKFSILSTYKSDASR 387 >UniRef50_Q1K1R5 RRNA (Guanine-N(2)-)-methyltransferase n=2 Tax=Proteobacteria RepID=Q1K1R5_DESAC Length = 375 Score = 413 bits (1061), Expect = e-114, Method: Composition-based stats. Identities = 153/377 (40%), Positives = 227/377 (60%), Gaps = 7/377 (1%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGP---VLILNDAFGA 57 MS + L R+P ++ +PL+AW+AADE++L +L D + P +LI+ND+FGA Sbjct: 1 MSQISVPQGQWDLYRYPVRNN-DPLRAWDAADEFILNELHDQSLPQPSQRLLIVNDSFGA 59 Query: 58 LSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKT 117 LSC L ++P + DS ++ NL+ N I + + F DS P +VLIKVPK+ Sbjct: 60 LSCCLHPYEPTLVSDSCLTYHGLLHNLKSNRIAQDCITFFDSLTTPPGHYDIVLIKVPKS 119 Query: 118 LALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCT 177 LALLE QL LR V+ ++ II A + + S +ELFEK+LGPT T+LA KKARLI + Sbjct: 120 LALLEDQLVRLRPVIKPESVIIGAAMVKHLSASAIELFEKILGPTHTSLARKKARLIFSS 179 Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEI-VDLG 236 F+ + + +L + H VFS LD+G+R ++ ++ +DLG Sbjct: 180 FDAERTLTPLPPANLRLPEFQLNLLQHPGVFSMNRLDLGSRLVLEQSHLLPPAKVIIDLG 239 Query: 237 CGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 296 CGNG++G+T + P+A + FVDES AV S+R+N E R E + + L+G++ Sbjct: 240 CGNGILGITAARQQPEAHLTFVDESYRAVDSARINFEAIFGHRPARFEVI--DCLNGIDR 297 Query: 297 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGN 356 + ++ NPPFHQQ + D VAW+MF AR+ L +G+L++V NRHL Y KLK++FGN Sbjct: 298 DSADLIINNPPFHQQQVVGDQVAWQMFRQARQVLGRSGQLWVVGNRHLGYHTKLKRLFGN 357 Query: 357 CTTIATNNKFVVLKAVK 373 C +A+ +KFV+LKA K Sbjct: 358 CKLVASTHKFVLLKATK 374 >UniRef50_D1XLW4 rRNA (Guanine-N(2)-)-methyltransferase n=5 Tax=Streptomyces RepID=D1XLW4_9ACTO Length = 386 Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 165/389 (42%), Positives = 236/389 (60%), Gaps = 18/389 (4%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLD-------DTEIRGPVLILND 53 M+ L L R+P + L+AW+AADEYLL++L+ E G V+++ D Sbjct: 1 MNRLTTSQGVFELTRYPEDPR-DRLRAWDAADEYLLRRLEGPEDGEPAPEAGGTVVVVGD 59 Query: 54 AFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIK 113 +GAL+ ALA ++P I DSY+++ ATR+NL NG D +V+ L + P++ +L++ Sbjct: 60 RWGALATALAGYRPIQITDSYLAQQATRDNLARNGADPDAVRMLSARDTPPERIDTLLLR 119 Query: 114 VPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARL 173 VPK+LA LE QL L V + T +I ++IHTSTL+LFE++LGPT T+LA KKARL Sbjct: 120 VPKSLAFLEDQLHRLAPAVHAGTVVIGTGMVKEIHTSTLQLFERILGPTRTSLAVKKARL 179 Query: 174 INCTFNEPQLADAPQTVSWKLEGTD-------WTIHNHANVFSRTGLDIGARFFMQHLP- 225 I+CT +P L AP ++ E + T+ NHA +F LDIG RFF++HLP Sbjct: 180 IHCT-PDPGLPMAPSPWPYRYELPEDIGVMSGRTVTNHAGIFCADRLDIGTRFFLKHLPR 238 Query: 226 ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEF 285 + +VDLGCGNGV+G P++ V F+DES AVAS+ N P + F Sbjct: 239 RSGPDRVVDLGCGNGVVGTAAALAAPESCVTFIDESYQAVASAEETFRANAPAGAE-ARF 297 Query: 286 MINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLD 345 ++ +A++ V + VL NPPFH A+TD A MF AR L+ GEL++V NRHL Sbjct: 298 VVGDAMADVPEQSVDLVLSNPPFHSHQAVTDATARTMFRGARAALRPGGELWVVGNRHLG 357 Query: 346 YFHKLKKIFGNCTTIATNNKFVVLKAVKL 374 + +L++IFGNCTT+A + KFVVL+AV+ Sbjct: 358 HHTQLRRIFGNCTTVAGDPKFVVLRAVRR 386 >UniRef50_A4VI28 Ribosomal RNA large subunit methyltransferase G n=12 Tax=Bacteria RepID=RLMG_PSEU5 Length = 375 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 159/377 (42%), Positives = 223/377 (59%), Gaps = 7/377 (1%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRG--PVLILNDAFGAL 58 M LD + SL L R P + PLQA++AADEYLL L + VLILND+FGAL Sbjct: 1 MPILDTPYASLDLIRQPEQPN-EPLQAFDAADEYLLATLHGQGLPAATRVLILNDSFGAL 59 Query: 59 SCALAEH-KPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKT 117 +CALA H + S GDS+++ LA ++NL N + V+F+ ++ VLI+VPKT Sbjct: 60 ACALAAHVEVTSSGDSHLAHLALQKNLARNDLPADRVRFVPASEAAQGPFDRVLIRVPKT 119 Query: 118 LALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCT 177 L+LLE+QL L + ++IA A + + + +L E+ +GP +LA KKARL++ T Sbjct: 120 LSLLEEQLIRLHDQLAPGAQVIAAAMIKHLPRAAGDLLEQYIGPVQASLAVKKARLLSAT 179 Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEG-EIVDLG 236 + +P ++L+ + NHAN+F R GLDIG R F+ HLP+ L + DLG Sbjct: 180 PVDKPAPQSPYPTRYQLDQPKLELLNHANLFCREGLDIGTRAFLPHLPKALGAIRVADLG 239 Query: 237 CGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 296 CGNGV+G+ NPQA++ VDES MAV S+R N + + + + L+ P Sbjct: 240 CGNGVLGIVYALGNPQAELTLVDESYMAVQSARENWQ--VILGERPADIRAGDGLAEQPP 297 Query: 297 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGN 356 + VLCNPPFHQQ + D +AW MF A+ L GEL+IV NRHL Y KLK++FGN Sbjct: 298 GSLDLVLCNPPFHQQQVVGDFLAWRMFTQAKAALTKGGELWIVGNRHLGYHLKLKRLFGN 357 Query: 357 CTTIATNNKFVVLKAVK 373 +A KFVVL+++K Sbjct: 358 AEQVAATPKFVVLRSIK 374 >UniRef50_B0TR07 Ribosomal RNA large subunit methyltransferase G n=21 Tax=Shewanella RepID=RLMG_SHEHH Length = 421 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 154/386 (39%), Positives = 229/386 (59%), Gaps = 12/386 (3%) Query: 2 SHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRG-PVLILNDAFGALSC 60 + L L R+P+ + N LQAW+AADE+L++ L DTE I+ND FGAL+ Sbjct: 3 TQFSVSGIELELLRYPSRQESN-LQAWDAADEHLIKHLIDTEQTNINTAIINDNFGALTA 61 Query: 61 ALAEHKPYSI----GDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPK 116 L P D+ S L T +NL N + ++ +++S + PQ +VL+K+PK Sbjct: 62 GLLSIDPSWALTLETDAKTSLLGTTQNLSRNQLPTDTLTWVNSCDELPQGFELVLMKLPK 121 Query: 117 TLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINC 176 L QL L V+ + TR++ GAKA+ I+ S LE EK LG + +L WKK R+I C Sbjct: 122 NLNYFSHQLNRLSHVLPAGTRVLIGAKAKSINKSLLETIEKNLGAASASLTWKKTRVITC 181 Query: 177 TFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLG 236 ++ ++ P+ +W + I N +NVF+ LDIGAR + ++P+ IVDLG Sbjct: 182 -ISDGKVRPLPKATTWSVPEFKLQITNLSNVFAANKLDIGARIMLDNMPKGDFKSIVDLG 240 Query: 237 CGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE----ALDRCEFMINNALS 292 CGNG++GL P+A + F+D+S MAVAS+R N N + ++ F ++ L+ Sbjct: 241 CGNGILGLHAKQVFPEAYIHFIDDSEMAVASARENWALNKLDNPALVGEQATFGWDDCLT 300 Query: 293 GV-EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLK 351 + E FR + +LCNPPFHQ A+TD++AW+MF A R LK G L++V NRHL Y KL+ Sbjct: 301 HMSEGFRPDLILCNPPFHQGEAITDHIAWQMFLDAFRRLKNGGILHVVGNRHLAYHVKLQ 360 Query: 352 KIFGNCTTIATNNKFVVLKAVKLGRR 377 +IF NCTT+A+N KFV+L+A K+ ++ Sbjct: 361 RIFKNCTTVASNGKFVILQAQKISKK 386 >UniRef50_Q488Q3 Ribosomal RNA large subunit methyltransferase G n=3 Tax=Alteromonadales RepID=RLMG_COLP3 Length = 392 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 166/391 (42%), Positives = 244/391 (62%), Gaps = 17/391 (4%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEI---RGPVLILNDAFGA 57 +S ++L L RFP + LQAW++ADEYL+ + D + + V I NDAFGA Sbjct: 2 ISPFIVNDKNLFLSRFPVSQVNRSLQAWDSADEYLINHVHDQNLINAQTKVAIFNDAFGA 61 Query: 58 LSCALAEH-----KPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLI 112 L+ + + SI DSYIS N+ N +D+S L+S P V+L Sbjct: 62 LAVNFCQSTSENPEVISINDSYISSEGASYNIEQNSLDDSHFTQLNSLDSLPNNIDVILY 121 Query: 113 KVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKAR 172 K+PK+ +LL +QL ++K V + IA +A++IH+STL++FEK LG T T+LA KKAR Sbjct: 122 KIPKSKSLLIEQLIQIKKSVNENCIFIAADRAKEIHSSTLKVFEKHLGTTKTSLAVKKAR 181 Query: 173 LINCTFNEPQLADAPQTVSWKLEG--------TDWTIHNHANVFSRTGLDIGARFFMQHL 224 L+ C F+ Q+ +P W + + TI NHANV++R LDIGAR+F+++L Sbjct: 182 LVFCQFDNKQVHQSPFPTVWSIPHKSTNDLPSRELTISNHANVYAREKLDIGARYFIENL 241 Query: 225 PE-NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRC 283 P ++DLGCGNGVIGLT+L P+A V F+DES MA++S++ N+ TN+P+ +++C Sbjct: 242 PTVAANSTVIDLGCGNGVIGLTVLANQPEAHVQFIDESTMAISSAKQNIMTNLPDVIEQC 301 Query: 284 EFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 343 EF +N++L+ +E + +LCNPPFHQ A TD++AW+MF + R LK GEL I+ N+ Sbjct: 302 EFTLNDSLTDIEGGSVDLILCNPPFHQNTATTDHIAWQMFKDSHRVLKKGGELRIIGNQK 361 Query: 344 LDYFHKLKKIFGNCTTIATNNKFVVLKAVKL 374 L Y KL+++FGN T IA+N+KFV A+K Sbjct: 362 LAYHIKLQRLFGNETLIASNDKFVTQSAIKR 392 >UniRef50_B1VMX8 Ribosomal RNA large subunit methyltransferase G n=10 Tax=Actinomycetales RepID=RLMG_STRGG Length = 384 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 168/386 (43%), Positives = 230/386 (59%), Gaps = 14/386 (3%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDT-----EIRGPVLILNDAF 55 M+ + L RFP +P +AW+AAD+YLLQQL D ++ G V ++ D + Sbjct: 1 MNRFTTSQGAFELARFP-EHPRDPFRAWDAADDYLLQQLTDPGTGPVDLSGTVAVVGDRW 59 Query: 56 GALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVP 115 GAL+ ALA H+P I DSY++ AT NL NGIDE +V+ L S P + V+L++VP Sbjct: 60 GALATALAAHRPVQISDSYLARRATLANLARNGIDEDAVRLLSSRDTPPDRIDVLLVRVP 119 Query: 116 KTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLIN 175 K+LA LE QL L V S T +I ++IHTSTL++FE+++GPT T+LA +KARLI Sbjct: 120 KSLAFLEDQLHRLAPAVHSGTVVIGTGMVKEIHTSTLKIFERIIGPTRTSLAVRKARLIF 179 Query: 176 CTFNEP-QLADAPQTVSWKLEG-----TDWTIHNHANVFSRTGLDIGARFFMQHLPENLE 229 T + +P ++L T NHA +F LDIG RFF++HLP Sbjct: 180 STPDPALPRTLSPWPYRYELPADVGPVAGLTAVNHAGIFCAERLDIGTRFFLKHLPTRSG 239 Query: 230 G-EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN 288 +VDLGCGNGV+GL+ NP A + FVDES AVAS+ P A + +F++ Sbjct: 240 AVRVVDLGCGNGVLGLSAAVANPDAHLTFVDESYGAVASAEETFRAGAP-AGAKADFLVG 298 Query: 289 NALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFH 348 + L+ ++P + VL NPPFH A TD A MF A+ L+ GEL++V NRHL Y Sbjct: 299 DGLADLDPGSVDLVLNNPPFHSHLATTDATARTMFAGAKTALRRGGELWVVGNRHLSYHT 358 Query: 349 KLKKIFGNCTTIATNNKFVVLKAVKL 374 L++IFGNCTT+A + KFVVL+AVK Sbjct: 359 HLRRIFGNCTTVAGDPKFVVLRAVKR 384 >UniRef50_Q4ZNG3 Ribosomal RNA large subunit methyltransferase G n=13 Tax=Pseudomonadaceae RepID=RLMG_PSEU2 Length = 374 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 157/377 (41%), Positives = 208/377 (55%), Gaps = 7/377 (1%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDT--EIRGPVLILNDAFGAL 58 M L + F L L R P D PLQA++AADEYLL + + VL+LND+FGAL Sbjct: 1 MPLLISPFAELDLIRQPEQQD-EPLQAFDAADEYLLNHVAQAGLSLPSRVLVLNDSFGAL 59 Query: 59 SCALAEHK-PYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKT 117 + +LA H S DS+++ A +NL NG+ +V + ++ VLI+VPKT Sbjct: 60 AASLAPHATVISSTDSFLAAQALEKNLARNGMSYDAVPHIPASEALQGPFDWVLIRVPKT 119 Query: 118 LALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCT 177 LALLE+QL L+ + R+IA A + + S +L E+ +GP +LA KKARL+ T Sbjct: 120 LALLEEQLIRLQGQLAPGARVIAAAMVKHLPRSAGDLLEEYVGPVQASLAVKKARLLFAT 179 Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL-EGEIVDLG 236 ++ +P ++LE + NHANVF R GLDIG R F+ HLP+NL + DLG Sbjct: 180 PQPMEVRTSPYPTRYRLEEPAIELLNHANVFCRDGLDIGTRAFLPHLPKNLGTARVADLG 239 Query: 237 CGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 296 CGNGV+ + NPQA VDES MAV S+ N + + L EP Sbjct: 240 CGNGVLAIASALDNPQAHYTLVDESFMAVKSAAENWRATL--GDRDVRVRAGDGLEMQEP 297 Query: 297 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGN 356 + VLCNPPFHQQ + D +AW MF AR L G LYIV NRHL Y KL ++F Sbjct: 298 DSLDVVLCNPPFHQQQVVGDFLAWRMFLQARAALVTGGALYIVGNRHLGYHTKLSRLFRG 357 Query: 357 CTTIATNNKFVVLKAVK 373 +A KFV+LKA K Sbjct: 358 VEQVAATPKFVILKARK 374 >UniRef50_A5F5X3 Ribosomal RNA large subunit methyltransferase G n=63 Tax=Gammaproteobacteria RepID=RLMG_VIBC3 Length = 376 Score = 393 bits (1009), Expect = e-108, Method: Composition-based stats. Identities = 153/366 (41%), Positives = 224/366 (61%), Gaps = 11/366 (3%) Query: 14 QRFPATDDVNPLQAWEAADEYLLQQLDDTEIR--GPVLILNDAFGALSCALAE-HKPYSI 70 RFP ++ LQAW+A DEYL+Q ++ + ++I+ND FG LSC ++ HK + Sbjct: 15 HRFPKRNN-ETLQAWDAGDEYLIQHVEQLALPESSHIVIINDHFGTLSCWFSQKHKVSMM 73 Query: 71 GDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRK 130 DSYI+ AT+ NL+ N V+ L + P VVL+++PK+ L L LRK Sbjct: 74 SDSYIAHQATQANLQQNQ--RPPVQLLTTLDPVPNDASVVLLQLPKSNRHLVWILSQLRK 131 Query: 131 VVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTV 190 ++ + IIA KA++IHTSTL LFEK LGPTTT+LAWKK RL+ + + Sbjct: 132 ALSPNIPIIAVNKAKEIHTSTLNLFEKHLGPTTTSLAWKKHRLVFSSATVNPANEVNPEC 191 Query: 191 SWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLE-GEIVDLGCGNGVIGLTLLDK 249 W +E T+ N NV+S LD+G+RF ++HLP + + +DLGCGNGV+ + L Sbjct: 192 GWSIEPYAITLTNLPNVYSGESLDLGSRFILEHLPADPTLEDFIDLGCGNGVLSVRLGQL 251 Query: 250 NPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFH 309 NPQAK+ VDES MA+AS++ N+ N+ + C + NN L G + ++CNPPFH Sbjct: 252 NPQAKITCVDESFMAIASAQKNLHDNLGKRDIHC--IANNCLDGFPAHSSSMIVCNPPFH 309 Query: 310 QQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG--NCTTIATNNKFV 367 QQ +TD++AW+MF ++ LK G+L+++ NRHL Y KL ++FG + IA N+KFV Sbjct: 310 QQQTITDHIAWQMFCDSKHVLKKGGKLWVIGNRHLGYDVKLARLFGKSHVRVIANNSKFV 369 Query: 368 VLKAVK 373 +L+A+K Sbjct: 370 ILQAIK 375 >UniRef50_A0YBC4 Putative ribosomal RNA small subunit methyltransferase D (RRNA (Guanine-N(2)-)-methyltransferase) (16S rRNA m2G966) n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBC4_9GAMM Length = 390 Score = 386 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 164/387 (42%), Positives = 237/387 (61%), Gaps = 15/387 (3%) Query: 1 MSHLDNGFRSLTLQRFPA----TDDVNPLQAWEAADEYLLQQLDDTEIR---GPVLILND 53 M L F S+ L R + T N L+AW+AADE LL L D E+ G +LI+ND Sbjct: 1 MDILSTAFGSIRLVRSSSALHNTKAANNLRAWDAADELLLAYLADNELPKNTGRLLIIND 60 Query: 54 AFGALSCALAEHKPYSIGDSYISELATRENLRLNGI---DESSVKFLDSTADYPQQPGVV 110 FGALSC+L+++ P S DS +S A + N N + + ++ L ST+D+ +V Sbjct: 61 NFGALSCSLSQYNPCSWSDSSVSLAAAKYNYAANDLGNSPANPLETLASTSDFVGNADLV 120 Query: 111 LIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKK 170 LIK+PKTLALLE QL +LRK T T II + + S L+LFEK++G T+ +LA KK Sbjct: 121 LIKIPKTLALLEHQLMSLRKNTTEKTIIIGAGMVKYLEKSYLQLFEKIIGGTSVSLAKKK 180 Query: 171 ARLINCTFNE-PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLE 229 ARLI T ++ Q A +P + ++ D + N+ANVFSR LDIG+RFF++ + Sbjct: 181 ARLIFSTVDQTKQPAPSPYPIKVAIDEFDLSTINYANVFSREKLDIGSRFFIERMKSLPA 240 Query: 230 GE-IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALD---RCEF 285 I+DLGCGNG++G+ P AK+ F+DES MA+AS++ ++E + + RC+F Sbjct: 241 ASSIIDLGCGNGILGIVAKRLYPTAKITFIDESYMAIASAKASLEHYLGGIITPEHRCDF 300 Query: 286 MINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLD 345 +++N+L VLCNPPFHQ + + D +A +MF ++R L G + IV NRHL+ Sbjct: 301 VVSNSLDQANGEPVELVLCNPPFHQNNTIGDEIASKMFIQSKRILINGGRIRIVGNRHLN 360 Query: 346 YFHKLKKIFGNCTTIATNNKFVVLKAV 372 Y LK++FGNC TIA+N KFV+L+A+ Sbjct: 361 YHIALKRLFGNCRTIASNKKFVILEAI 387 >UniRef50_B4RZB4 Ribosomal RNA large subunit methyltransferase G n=2 Tax=Alteromonas macleodii RepID=RLMG_ALTMD Length = 410 Score = 383 bits (983), Expect = e-105, Method: Composition-based stats. Identities = 169/408 (41%), Positives = 234/408 (57%), Gaps = 35/408 (8%) Query: 2 SHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLD-----------DTEIRGPVLI 50 + R L+L R+P LQAW++ADE +++ L+ D E ++I Sbjct: 3 TEFIFADRQLSLIRYPEKHQHVSLQAWDSADELVIEHLESLLSENELSIGDNESTPSLMI 62 Query: 51 LNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGID------------ESSVKFLD 98 ND FGAL C + PY + DSYIS + ENL+ N + S VK L Sbjct: 63 FNDDFGALGCWFSHLAPYWVSDSYISLRSLHENLKANSLIRASEGSCTQELKTSPVKTLT 122 Query: 99 STADYP----QQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLEL 154 S P VV+IKVP+ LALLEQQL L+ +T +T++IA K + I S L L Sbjct: 123 SVESASFKPACAPAVVVIKVPRALALLEQQLIDLQAYITPETQVIATGKVKAITKSALNL 182 Query: 155 FEKVLGPTTTTLAWKKARLINCTFNEP-QLADAPQTVSWKLE---GTDWTIHNHANVFSR 210 FEK +GPTTT+LA KK+RLI T + + A +P W+ + G I N AN F+R Sbjct: 183 FEKYIGPTTTSLAKKKSRLIFATPRDSLKQATSPYPTRWQCKSTMGAALIIDNLANTFAR 242 Query: 211 TGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRL 270 LDIGAR ++H+ + +VDLGCGNGV+G+ L P AKV+FVDES MA+ S+RL Sbjct: 243 QSLDIGARIMLEHMTVSANDVVVDLGCGNGVLGVNALSLAPDAKVIFVDESYMALESARL 302 Query: 271 NVETNMPEALDRCEFMINNALSGVEPFR----FNAVLCNPPFHQQHALTDNVAWEMFHHA 326 NV N P+ +++CEF+ +N L + +LCNPPFHQQ+A+TD++AW+MF + Sbjct: 303 NVLNNFPDKIEQCEFVASNCLETLLNRENKPAVTKILCNPPFHQQNAITDHIAWQMFTDS 362 Query: 327 RRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKL 374 R L +G L +V NRHL+Y KLKK+FG +A++ KFV+L K Sbjct: 363 RDLLVKSGHLVVVGNRHLEYHIKLKKLFGGAKVLASDKKFVILGTAKR 410 >UniRef50_B5JW57 Ribosomal ribonucleate guanine-2-methyltransferase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW57_9GAMM Length = 388 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 152/391 (38%), Positives = 210/391 (53%), Gaps = 23/391 (5%) Query: 4 LDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPV--LILNDAFGALSCA 61 + F LQR P LQAW+AADEYLLQ + RG V L+LND FGAL+ Sbjct: 1 MQTPFGHFELQRLPLRRR-ETLQAWDAADEYLLQH-HAAQRRGDVSPLLLNDNFGALAIN 58 Query: 62 LAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTA-DYPQQPGVVLIKVPKTLAL 120 LA +P S GDS + AT NL+LN + E SV + ST Q VLI+VPK LAL Sbjct: 59 LARQQPVSWGDSATAHAATAYNLKLNALSEKSVLCVPSTQVPALQGVTDVLIRVPKNLAL 118 Query: 121 LEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE 180 EQQLR LR ++ + ++ A + + L E++LGP + A KKARLI+C + Sbjct: 119 FEQQLRQLRPLLAAQAQVTAAGMVKHLPHGAKPLMEQILGPCQLSRAEKKARLIHCVAEQ 178 Query: 181 PQLADAPQTVSW-KLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEG-EIVDLGCG 238 ++ D + N NVF+ LDIGARFF++ IVDLGCG Sbjct: 179 GGQHIEALPDRLCEVSEWDIQLSNQVNVFAHDKLDIGARFFLEQFHHLPAAQRIVDLGCG 238 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 +GV+G+ + P A V F+DES MAVAS++ N + N+ + D F+ ++ L Sbjct: 239 SGVLGIAAQKQQPHAAVTFIDESYMAVASAKKNYQINIGDG-DSVRFIADHQLPACRGSA 297 Query: 299 F---------------NAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 343 F + +LCNPPFHQ + +++++A M + + L GEL++V NRH Sbjct: 298 FKPTCRPEGRPTPTLPDLILCNPPFHQGNTISEHIARGMIQQSHQALAQGGELWLVFNRH 357 Query: 344 LDYFHKLKKIFGNCTTIATNNKFVVLKAVKL 374 L Y LK++FG TIA N KF+V +AVK Sbjct: 358 LSYPSLLKRLFGGFETIAQNKKFIVTRAVKR 388 >UniRef50_A0L9S5 Ribosomal RNA large subunit methyltransferase G n=1 Tax=Magnetococcus sp. MC-1 RepID=RLMG_MAGSM Length = 369 Score = 355 bits (912), Expect = 1e-96, Method: Composition-based stats. Identities = 145/375 (38%), Positives = 210/375 (56%), Gaps = 10/375 (2%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSC 60 M HL+ +LTL+RFP PLQA L + G +LILND FGAL+C Sbjct: 1 MQHLNIHGHTLTLRRFPHKPGC-PLQA--WDAADALALTNHALPDGEILILNDHFGALAC 57 Query: 61 ALA--EHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTL 118 LA E + DSY++ A +NL+LN I E+ + + A P P +LIK+P+ L Sbjct: 58 GLAYPERTLEWVNDSYMAHQALAQNLQLNRI-ETPLHRTPALAASPTNPVGILIKLPRML 116 Query: 119 ALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTF 178 LL QL L + T ++ A+ +D+ ++ +L ++L + A KKARLI Sbjct: 117 QLLSSQLDWLNLHLPKGTPVVIAARQKDMPSTLPDLTRRLLDDVHPSRAEKKARLIFGQL 176 Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCG 238 + Q A + +W D + ++ NVF R LD+GAR +Q+L + ++VDLGCG Sbjct: 177 SGRQSGQA-EITAWHCAELDCLLSHYPNVFGRQKLDLGARVLLQNL-GTIPDQVVDLGCG 234 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 NGV+ + L +NP + V+ VDES A S ++N+E + + + ++LS +E + Sbjct: 235 NGVLSIAALQRNPNSHVLAVDESWQATRSCQINLER--VRTPEHFKVVWGHSLSFIEGMQ 292 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCT 358 + VLCNPPFHQ LTD++AW MF A R LK G L +V NRHL Y KL K+FG+C Sbjct: 293 ADLVLCNPPFHQHQTLTDDIAWCMFKDAHRVLKPGGRLRMVGNRHLGYHAKLHKLFGHCR 352 Query: 359 TIATNNKFVVLKAVK 373 +IA KFVVL++VK Sbjct: 353 SIAATPKFVVLESVK 367 >UniRef50_Q0VPK2 Ribosomal RNA large subunit methyltransferase G n=2 Tax=Alcanivorax RepID=RLMG_ALCBS Length = 390 Score = 350 bits (897), Expect = 8e-95, Method: Composition-based stats. Identities = 141/385 (36%), Positives = 203/385 (52%), Gaps = 21/385 (5%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLL-------QQLDDTEIRGPVLILND 53 M+ + + L LQR+P + LQAW+ AD YLL Q L + + L+LND Sbjct: 1 MTPFHHPWGELCLQRWPRRRN-ETLQAWDNADLYLLNTLAERGQALGNGDNAPKTLVLND 59 Query: 54 AFGALSCALAEH-----KPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPG 108 GAL AL + S GDSY + A R N NG+D ++ F Q P Sbjct: 60 QQGALCLALQQAAASALDIESSGDSYTAAAAARANAVDNGLD-PNLLFCWPLDAPKQSPD 118 Query: 109 VVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAW 168 V+++VPK++ALL+ QL+ L + I + + + L ++ LG W Sbjct: 119 QVIMRVPKSIALLQWQLQWLSGHLPKGVPIWLAGMDKHLPRQLVPLMQRYLGNGRAEYGW 178 Query: 169 KKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL 228 KKARL + LAD +++ W + HA VF++ LDIGARFF+ HLPE L Sbjct: 179 KKARLFSAQAPGRVLADTDYPC--RVDALQWRLTVHAGVFAQQQLDIGARFFLDHLPEAL 236 Query: 229 --EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFM 286 ++ DLGCGNGVIG+ +L NP A+V F DES +A+ S+R NV +A F Sbjct: 237 HTGAKVADLGCGNGVIGMAVLKANPAARVTFCDESWLALESARDNVSRYFSDAES--HFH 294 Query: 287 INNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY 346 + + L+G+E RF+ +L NPPFH + + D+VA +F+ A L GEL ++ NRHL Y Sbjct: 295 LGDGLAGLE-QRFDCILLNPPFHDGYVVGDHVARRLFNQAATALVPGGELRVIGNRHLGY 353 Query: 347 FHKLKKIFGNCTTIATNNKFVVLKA 371 L + F + T +A+N KFVV + Sbjct: 354 HKVLARRFTSVTVLASNAKFVVWRC 378 >UniRef50_Q1N4Z1 RRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Bermanella marisrubri RepID=Q1N4Z1_9GAMM Length = 366 Score = 336 bits (863), Expect = 6e-91, Method: Composition-based stats. Identities = 120/378 (31%), Positives = 187/378 (49%), Gaps = 21/378 (5%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSC 60 M L+ R+L L R P T PL+ W+AADEY++ + D + I+ND FGAL C Sbjct: 1 MDTLNIAGRTLKLVR-PGTPAKLPLRPWDAADEYIINEAQDL---AKITIINDGFGALGC 56 Query: 61 ALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL 120 L++H + I DS + A NL NGI + L V IK+P+ + Sbjct: 57 VLSDHIDHWISDSACASDALNSNLNRNGI-TAQFHILSPMQMQNANGEVAAIKLPRNASY 115 Query: 121 LEQQLRALRKVVTSDTRIIA-GAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFN 179 + L + R I + + + L F + G KKA + + Sbjct: 116 NHYLIEQL---IHQGYREIWFAGMMKHLPKNLL-SFLQQFGNVQRLPFVKKATIFKLAVD 171 Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLP------ENLEGEIV 233 P + + + G T+ HANVF R LD+GA FF+QH + + ++ Sbjct: 172 TPNVKSSGYPKQLNIHGQ--TLWTHANVFGRDKLDLGAEFFLQHFKSIQSQCQKAQPKVA 229 Query: 234 DLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG 293 DL G+G++GL + P +++ F DES MA+ S +L+ + N ++ F + L Sbjct: 230 DLCAGSGILGLKFKELAPDSELHFYDESAMAIESCQLSWQANQTDS--NVAFHWQDGLEN 287 Query: 294 VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKI 353 EP F+ +LCNPPFH+ + ++D++A +F A++ L G+LYIVANRHL Y L+++ Sbjct: 288 AEPV-FDLILCNPPFHENNTVSDHIARRLFKQAKQALAEQGQLYIVANRHLPYQSVLQRM 346 Query: 354 FGNCTTIATNNKFVVLKA 371 F + +A N KFV+L A Sbjct: 347 FKHVNQVAQNKKFVILHA 364 >UniRef50_A4BHH5 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BHH5_9GAMM Length = 367 Score = 334 bits (858), Expect = 2e-90, Method: Composition-based stats. Identities = 114/367 (31%), Positives = 188/367 (51%), Gaps = 18/367 (4%) Query: 10 SLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYS 69 S LQR P LQAW AADE L++ R P+L+LNDAFGAL+ AL + Sbjct: 12 SYRLQRVPQDHR---LQAWNAADELFLERYKPD--RSPILLLNDAFGALAVALHDQPVQW 66 Query: 70 IGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALR 129 S +++ A + N + N + + ++ L S A + V L +PK++ QL Sbjct: 67 WHASAMAQEALQLNCQANRVRQPNI--LTSLATETEAHNVAL-HIPKSINYFAWQLEQCC 123 Query: 130 KVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQT 189 + D I A + I +E+ ++ + A KKAR+I ++P+ Sbjct: 124 RHSAPDRTIYALGMVKHISAGHIEVMNRLFEEVSPGRAEKKARVI--ELSKPKHIQISTQ 181 Query: 190 VSWKLEGTDWTIHNHANVFSRTGLDIGARFFM---QHLPENLEGEIVDLGCGNGVIGLTL 246 ++++ + T+ + F+ D GA F+ +HLP +++DLGCGNG++GL Sbjct: 182 RQYRVQNPNLTLRHLPGCFAENRPDPGALVFLSYYEHLPAA--DKVLDLGCGNGILGLAY 239 Query: 247 LDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE-PFRFNAVLCN 305 +P A+VV +DE+ A+ S+ N N + +N L+ + +F+ +LCN Sbjct: 240 FKAHPDAQVVLIDENAQALKSAEQNWTLNDLPG--NAITVHSNGLNALAADQQFDLILCN 297 Query: 306 PPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNK 365 PPFHQ + LT+ +A ++F A++ L +GE ++VANRHL Y +LKK F + ++ + K Sbjct: 298 PPFHQDNTLTEGIAQKLFDDAKKHLSKDGEFWVVANRHLSYATELKKRFKDVHLVSKHPK 357 Query: 366 FVVLKAV 372 FV+ K Sbjct: 358 FVIWKCT 364 >UniRef50_A1U203 Methyltransferase small n=2 Tax=Marinobacter RepID=A1U203_MARAV Length = 379 Score = 329 bits (843), Expect = 1e-88, Method: Composition-based stats. Identities = 116/376 (30%), Positives = 175/376 (46%), Gaps = 13/376 (3%) Query: 3 HLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRG-PVLILNDAFGALSCA 61 L L L R P L+AW+AADE LL + G VL+++D FGAL+ Sbjct: 5 RLQTPAGDLRLIR-PG--GTAGLRAWDAADELLLSAAEPYLADGLRVLVVDDQFGALTLG 61 Query: 62 LAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALL 121 LA ++P ++ DS + N LN L+ +VL+++P+ L Sbjct: 62 LACYQPQTVADSATLAHSLLTNASLNPALPDCPAVLNWRRPPSGPFDLVLLRIPRQAGYL 121 Query: 122 EQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEP 181 LR L V+ D RI+AG + + ++++F + A KKAR++ C Sbjct: 122 AWLLRWLNSVLAEDGRILAGGMIKHLPDRSVDVFASAVVTEQVLPARKKARVVVCRGGSA 181 Query: 182 QLADA-PQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPE-----NLEGEIVDL 235 L + Q + + G + VF+R LDIG R + +P+ G I+DL Sbjct: 182 TLPEWQEQWRGYPVAGLPGPVEALPAVFAREKLDIGTRELLPLIPQAVSRVPPAGRILDL 241 Query: 236 GCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE 295 CGNGV+GL+ L P A+V F D S A+AS N+ E D + ++ Sbjct: 242 ACGNGVLGLSALAGRPGAEVHFSDVSSQAIASVEHNLSRY--EGGDCVHLWHQDGIADDL 299 Query: 296 PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG 355 P + +L NPPFH+ + D++A +F A R L G + +V NRHL Y LK+ F Sbjct: 300 PD-YQLILLNPPFHEGGVVGDHIALRLFRDAARHLAPGGRVLMVGNRHLGYHRSLKQYFS 358 Query: 356 NCTTIATNNKFVVLKA 371 + A + KFVV +A Sbjct: 359 SVEQRAASPKFVVFEA 374 >UniRef50_B7RVB2 Ribosomal protein L11 methyltransferase, putative n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RVB2_9GAMM Length = 371 Score = 308 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 117/372 (31%), Positives = 183/372 (49%), Gaps = 10/372 (2%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSC 60 ++ L+ LQR+P+ + PL+AW AAD LL+ + + L++ND GALS Sbjct: 6 LTRLNCPQGEFELQRYPSR-NREPLRAWCAADVLLLEATKASSVN--TLVVNDDHGALSL 62 Query: 61 ALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL 120 L+ ++ DS ++ A +N LN + V + P +++++PK L Sbjct: 63 PLSASAMWT--DSALAAEALAQNSSLNDLPSPKVIWSTQLPRLP--VDRIVLRIPKQLPY 118 Query: 121 LEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE 180 E QL L V+ + T+++ + + T L E+ LGP +KARL + T Sbjct: 119 FEFQLAQLATVMPAGTQLLCAGMDKHLSPHTAALMEQQLGPVERHRGRQKARLFSATLPG 178 Query: 181 PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLE-GEIVDLGCGN 239 +P S+ + D + ANVFSR LD G+R ++ L + DL CGN Sbjct: 179 EAKGPSPSEASYHCDLIDQKLTGLANVFSREKLDPGSRLMLETLRRAEPVASVADLACGN 238 Query: 240 GVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRF 299 G++G+ L N + V+F DES MA+AS+R F + + L G+E +F Sbjct: 239 GLLGIAALHFNLASSVLFADESAMAIASARA-NAARAARHDSEAAFHLGDGLQGIE-RKF 296 Query: 300 NAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTT 359 + ++CNPPFH H + D + A L G L +VANRHLDY L+++F + Sbjct: 297 DLIVCNPPFHLGHTVDDFAGRRLLQQAAHSLLPGGSLLLVANRHLDYAPSLQRLFRHAEV 356 Query: 360 IATNNKFVVLKA 371 +A N KFVV +A Sbjct: 357 MAQNAKFVVWRA 368 >UniRef50_B8H9N3 Methyltransferase small n=10 Tax=Actinomycetales RepID=B8H9N3_ARTCA Length = 418 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 106/380 (27%), Positives = 162/380 (42%), Gaps = 19/380 (5%) Query: 13 LQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRG-PVLILNDAFGALSCA----LAEHKP 67 L+R P + N LQAW+A D LL+ T G V ++ D +GAL+ LA Sbjct: 41 LRRHPDVEAPN-LQAWDATDRLLLETAAATVRPGSAVTVIGDRYGALTLGALDLLAPGTL 99 Query: 68 YSIGDSYISELATRENLRLNGIDE----------SSVKFLDSTADYPQQPGVVLIKVPKT 117 D E A ++N R + + L A+ VL+++PKT Sbjct: 100 RVHQDLVTGERALQQNARAWQATQETDDAGSGRVPEFRQLPLGAELLTGADTVLLQLPKT 159 Query: 118 LALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCT 177 LA L++ + + I+AG + + + + E+ LA +K+R+I + Sbjct: 160 LAELDEVAATVARHAAPGALILAGGRVKHMSLGMNGVLERYFDSVQPQLARQKSRVIVAS 219 Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE-IVDLG 236 ++ L+ + H VF+ LDIG RF + LP VDLG Sbjct: 220 HSKAGQPPTSFPAVVHLDELGLDVAAHGAVFAGPKLDIGTRFLLTFLPAMKPARHAVDLG 279 Query: 237 CGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 296 CG G++ P+AKV D+S AVAS+ N + R + ++ALS + Sbjct: 280 CGTGILAAMYARTYPEAKVTATDQSAAAVASALATARANGLDG--RISALQDDALSTMAD 337 Query: 297 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGN 356 + VL NPPFH + ++ A R L GEL+ V NRHL Y L++ G Sbjct: 338 ASADLVLLNPPFHVGAGVHAGAGLKLIEAAGRVLAPGGELWTVYNRHLPYLPALERAVGP 397 Query: 357 CTTIATNNKFVVLKAVKLGR 376 T N KF V ++V+ Sbjct: 398 TTVEGNNPKFTVARSVRRSA 417 >UniRef50_A3J9J3 Nucleotide methyltransferase, putative n=1 Tax=Marinobacter sp. ELB17 RepID=A3J9J3_9ALTE Length = 419 Score = 286 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 108/398 (27%), Positives = 181/398 (45%), Gaps = 48/398 (12%) Query: 21 DVNPLQAWEAADEYLLQQ---------LDDTEIRGP----VLILNDAFGALSCALAEHKP 67 +V LQAW++ADE LLQQ L D + G VL+++D FGAL+ L + +P Sbjct: 25 NVASLQAWDSADELLLQQATHWMEDGWLADKQPAGKQHPRVLVVDDNFGALTLGLWDLQP 84 Query: 68 YSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQP-------------------- 107 ++ DS NL LN +S++ + P Sbjct: 85 ITLADSAALGRVLAHNLALNPPLQSNLSDQPVPLSWCDDPVLAQETATNSSHSANRLNGP 144 Query: 108 -GVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTL 166 +V++++P+ L LR + ++ + ++AG + + ++++F + + Sbjct: 145 FDLVVMRIPRYGDYLAWLLRRVNTLLADNGVLLAGGMIKHLPDRSVDVFAQAVVTEKVCP 204 Query: 167 AWKKARLINCTFNEPQLADAPQTVS-WKLEGTD-----WTIHNHANVFSRTGLDIGARFF 220 A KKAR++ C +L + L ++ VF+R LDIG R Sbjct: 205 ARKKARVVICRKGSAELTSWTSAWQGYSLAAGAETAKALSVSALPAVFARDKLDIGTRAL 264 Query: 221 MQHLPENLEG-----EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN 275 + H+ + +++DL CGNGV+GL L N ++ F D S AV S+ N Sbjct: 265 LPHVTQAAAALAPGAQVLDLACGNGVLGLAALAANSHLELTFSDVSSQAVISAATNAARE 324 Query: 276 MPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGE 335 P++ F ++++ + F+ +L NPPFH+ + D++A +F ARR L+ G Sbjct: 325 FPQSA--FSFRHADSIAA-DGGEFDLILLNPPFHEGGVVGDHIALALFAAARRHLRPGGR 381 Query: 336 LYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 L +V NRHL Y L + F + N KFVVL+A + Sbjct: 382 LLLVGNRHLGYHRSLGRFFPQVRQLDANPKFVVLEASR 419 >UniRef50_C4K8X0 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=RSMC_HAMD5 Length = 336 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 73/274 (26%), Positives = 119/274 (43%), Gaps = 7/274 (2%) Query: 99 STADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKV 158 + D + V+ PK A + QL L + S T I + R S +L + Sbjct: 69 PSEDLVSKTDTVIFYWPKNKAQAQFQLEHLCSLFPSQTNIFIVGENRSGIGSAKDLLAEN 128 Query: 159 LGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGAR 218 +G A + + C +P Q ++++ D I VFS LD G++ Sbjct: 129 VGLHKMDAARRCSLYYGCLKQKPVFNMESQWRRYQVK--DVQIKTLPGVFSANQLDEGSQ 186 Query: 219 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE 278 + L G+++DL CG GV+G L ++PQ ++ D + A+ SSR N+ N + Sbjct: 187 LLLSSFDIPLSGKVLDLACGAGVLGTILARQSPQIELTLSDVNAAALESSRANLAVNHIK 246 Query: 279 ALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYI 338 A + ++ S + P RFN +L N PFH+ + + A L G+L + Sbjct: 247 A----RVVPSDLYSDI-PERFNLILSNLPFHKGLKTDIKMIEKCIEEAPGHLYKGGKLRL 301 Query: 339 VANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAV 372 VAN L Y L + FG+ + N +F V +A Sbjct: 302 VANAFLPYPKLLNRTFGHYEVLTQNARFKVYQAT 335 >UniRef50_A9WVF5 16S rRNA m(2)G 966 methyltransferase n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WVF5_RENSM Length = 386 Score = 267 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 99/388 (25%), Positives = 177/388 (45%), Gaps = 21/388 (5%) Query: 5 DNGFRSLTLQRFPATDDVNPLQAWEAADEYLL----QQLDDTEIRGP-VLILNDAFGALS 59 F L+R P + N L AW+A+D LL + LD + + V++LND++G ++ Sbjct: 3 QTKFDPALLRRRPDIESSN-LFAWDASDALLLDLATEHLDSSTTQAADVVVLNDSYGGVA 61 Query: 60 CALAEHKPYS----IGDSYISELATRENLRLNGIDE--SSVKFLD-STADYPQQPGVVLI 112 L + D E A R N G+ E + + F+D A +VL+ Sbjct: 62 LGLTIRSGLNGIRVHQDLLTGEQALRLNAERLGLGELLTQLPFVDDGGAQLLGGAKLVLL 121 Query: 113 KVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKAR 172 K+P++LA LE+ +A+ + + +IA + + + + + T LA +K+R Sbjct: 122 KLPRSLAELEEMAQAIARFADPEVIVIAVGRIKHMSLAMNRVLAASFEEVTAGLARQKSR 181 Query: 173 LINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQ-----HLPEN 227 + + A + + + H VF+ LDIG RF ++ + Sbjct: 182 PLFASLPREAAVGADFPRGSVIADLNLQVRAHGEVFAGASLDIGTRFLIEQVRAGAIAIP 241 Query: 228 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMI 287 G +DLGCG G++ + + +V+ D + AS T + + + + Sbjct: 242 ESGTALDLGCGTGLLAVEMASAQSGLRVIATD---RSAASIASAQATALANGVPQVGVLQ 298 Query: 288 NNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF 347 ++A + + +L NPPFH A+ VA ++FH A R L+ G+L+ V NRHL + Sbjct: 299 DDAAVSLPEGSVDLILLNPPFHSGAAVHSAVATKLFHAASRLLRPGGQLFTVYNRHLTHA 358 Query: 348 HKLKKIFGNCTTIATNNKFVVLKAVKLG 375 L+K+ G + +A N+KFV+L++ + Sbjct: 359 KVLEKVVGRSSVLAQNSKFVILRSTRRS 386 >UniRef50_A7MUT5 Ribosomal RNA small subunit methyltransferase C n=54 Tax=Vibrionales RepID=RSMC_VIBHB Length = 341 Score = 263 bits (672), Expect = 9e-69, Method: Composition-based stats. Identities = 82/284 (28%), Positives = 128/284 (45%), Gaps = 13/284 (4%) Query: 95 KFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLEL 154 S D Q +VL+ PK A E L L + +T I+ + R S ++ Sbjct: 65 SHFGSEFDIETQADMVLLYWPKAKAEAEYLLAMLMTKLGINTEIVVVGENRSGIKSIEKM 124 Query: 155 FEKVLGPTTTTLAWKKARLINCT-FNEPQ---LADAPQTVSWKLEGTDWTIHNHANVFSR 210 F K GP + ++ T NEP+ AD ++ L T+ + VFS Sbjct: 125 F-KEYGPVKKYDSARRCSFYWGTCLNEPKPFNQADWFKSYEITLGEQSLTVKSLPGVFSH 183 Query: 211 TGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRL 270 D+G+R ++ LP+ L G+++D GCG GV+G + NP+ + D + A+ SS+ Sbjct: 184 GEFDLGSRLLLETLPK-LSGKVLDFGCGAGVLGAFMAKANPEIAIEMCDINAYAITSSQA 242 Query: 271 NVETNMPEALDRCEFMINNALSGV-EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRC 329 +E N ++ S + +RF ++ NPPFH N A + A + Sbjct: 243 TLEANGLSG----RVFASDIYSDTAKDYRF--IVSNPPFHSGLDTNYNAAETLLGQAPKY 296 Query: 330 LKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 + NGE+ IVAN L Y ++K F NC T+ NKF + A K Sbjct: 297 MTANGEMIIVANSFLQYPPIIEKAFNNCETLNKTNKFSIYYAKK 340 >UniRef50_D1BFL3 16S rRNA m(2)G 1207 methyltransferase n=7 Tax=Bacteria RepID=D1BFL3_SANKS Length = 394 Score = 263 bits (672), Expect = 9e-69, Method: Composition-based stats. Identities = 111/385 (28%), Positives = 168/385 (43%), Gaps = 28/385 (7%) Query: 17 PATDDVNPLQAWEAADEYLLQQL-----DDTEIRGPVLILNDAFGALSCA----LAEHKP 67 P D + L EAAD+ + E V++L+D GAL L E P Sbjct: 10 PTPDGTDRLLLHEAADDLREAHAAHEGRESRERHDDVVVLDDRSGALVLGVLAGLEERAP 69 Query: 68 YSIG-------------DSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKV 114 S G D SE + + L G + D + VVL+++ Sbjct: 70 ESSGPTPVPAPRVRSAQDRVTSERSLQAALADAGACDRVTVHAGLGPDLLRDARVVLLRL 129 Query: 115 PKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLI 174 PK+L LE+ +A+ + D + AGA + + + E+ + G TL KAR + Sbjct: 130 PKSLDALEETAQAVARWAPDDVVVYAGAPVKHMTRTMNEVLLRSFGEVHATLGRHKARAL 189 Query: 175 NCT--FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEG-- 230 + + + + +L+ D T+ H VF+ T LDIG R + L + Sbjct: 190 VARRPLDAARTTEPTFPRTARLDELDLTVVAHGGVFAGTRLDIGTRTLLGVLDQAAPEAR 249 Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 + VDLGCG GV+ L P +VV D+S AVAS+ N DR + ++A Sbjct: 250 DAVDLGCGTGVLATVLARSRPGLRVVASDQSAAAVASTLATAGANG--VGDRVTGLRDDA 307 Query: 291 LSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKL 350 LS + + V+CNPPFH+ L + A MF A R L+ GEL+ V N HL + L Sbjct: 308 LSTLPDASADLVVCNPPFHEGTTLETDAAHRMFAAAARVLRPGGELWTVYNSHLRHKSAL 367 Query: 351 KKIFGNCTTIATNNKFVVLKAVKLG 375 ++ G T + N KF V ++V+ Sbjct: 368 GRVVGPTTMVLQNPKFTVTRSVRPD 392 >UniRef50_C9NP08 Ribosomal RNA small subunit methyltransferase C n=9 Tax=Vibrionaceae RepID=C9NP08_9VIBR Length = 357 Score = 260 bits (664), Expect = 7e-68, Method: Composition-based stats. Identities = 74/283 (26%), Positives = 122/283 (43%), Gaps = 11/283 (3%) Query: 95 KFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLEL 154 + Q ++L+ PK A E L L + +T ++ + R S ++ Sbjct: 82 TVFGAEFTDQTQADMILLYWPKAKAEAEFLLAMLLAKLGPETEVVVVGENRSGVKSIEKM 141 Query: 155 FEKVLGPTTTTLAWKKARLINCT-FNEP---QLADAPQTVSWKLEGTDWTIHNHANVFSR 210 F K GP + ++ +P L D + +G + TI + VFS Sbjct: 142 F-KPYGPINKFDSARRCSFYWGQCLEQPAEFNLNDWFKQYRVSYQGHELTIKSLPGVFSH 200 Query: 211 TGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRL 270 DIG++ + LP L G+++D GCG GVIG + N + K+ D S +AV SS+ Sbjct: 201 GQFDIGSQLLLDTLPA-LSGKVLDFGCGAGVIGSVMATLNAEIKLEMCDISALAVESSKA 259 Query: 271 NVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCL 330 +E N + ++ S + ++ NPPFH + + + A + Sbjct: 260 TLEANGLKG----RVFASDIYSDTS-QDYQFIISNPPFHAGLDTSYSATETLLAEAPKHQ 314 Query: 331 KINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 + G+L IVAN L Y +++ FGNC T+ NKF + A K Sbjct: 315 RSGGQLLIVANSFLKYPPIIQQAFGNCETLNKTNKFTIYYAKK 357 >UniRef50_Q7MZN0 Ribosomal RNA small subunit methyltransferase C n=6 Tax=Enterobacteriaceae RepID=RSMC_PHOLL Length = 338 Score = 260 bits (664), Expect = 8e-68, Method: Composition-based stats. Identities = 84/344 (24%), Positives = 142/344 (41%), Gaps = 15/344 (4%) Query: 31 ADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGID 90 A E +L+ + +L D L+ + + Y + L Sbjct: 7 ASEVILRHREQFS-SHHLLFAGDIQDTLATQIDAASVRVHTNQYHHWQSLIRTL-----G 60 Query: 91 ESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTS 150 ES+ L + + Q ++ PK+ QLR+L V+ I + R S Sbjct: 61 ESAWFGLVAEKAFTQGCDTLIYYWPKSKQEARFQLRSLFSVLPKGINIFIVGENRSGVRS 120 Query: 151 TLELFEKVLGPTTTTLAWKKARLINCTFN-EPQLADAPQTVSWKLEGTDWTIHNHANVFS 209 +L + + + ++ L E Q S+++E ++ VFS Sbjct: 121 VDKLMD-GMATFRKIDSARRCSLFYGQLEHEVQFEQDNWWNSYQVENV--IVNTLPGVFS 177 Query: 210 RTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSR 269 + LD+G+R + + L G ++D+ CG GV+ L KNP+ + D + A+ASS+ Sbjct: 178 QDELDVGSRLLLSTFDKPLSGNLLDIACGAGVLAAVLGKKNPELALTLSDVNAAAIASSK 237 Query: 270 LNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRC 329 ++ N E +++N S +E +F+ ++ NPPFH+ + ++ A Sbjct: 238 ATLKANKLEG----HVVVSNVYSNIED-KFDWIISNPPFHEGLKTSLLATDDLIRQAPNH 292 Query: 330 LKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 LK G+L IVAN L Y L K FG IA KF V +A K Sbjct: 293 LKPGGKLRIVANAFLPYPDLLDKTFGTHEVIAQTGKFKVYQATK 336 >UniRef50_A1SZ19 Ribosomal RNA small subunit methyltransferase C n=2 Tax=Psychromonas RepID=RSMC_PSYIN Length = 349 Score = 259 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 79/288 (27%), Positives = 127/288 (44%), Gaps = 10/288 (3%) Query: 89 IDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIH 148 + S V F D + ++LI +PK L L + II + + Sbjct: 65 LTTSEVHFTD-NYQGETKFDLLLIFLPKAKQETLYLLANLTPHLQPGASIILVGEKKCGI 123 Query: 149 TSTLELFEKVLGPTTTTLAWKKARLINCTFNEP----QLADAPQTVSWKLEGTDWTIHNH 204 S L + + +++ N+P + +T + T+ I + Sbjct: 124 KSADSLLASYSNRINMIDSARHCSILHAELNQPVNAFTQSQWIKTYPLNINNTELQICSL 183 Query: 205 ANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMA 264 VFS LD G+ +Q+LP+ + G ++D GCG GVI +L K+PQ V VD + A Sbjct: 184 PGVFSYGELDKGSELLLQNLPDKMSGRVLDFGCGAGVIACYVLKKHPQLSVDLVDINAFA 243 Query: 265 VASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFH 324 +AS++L++++N E +N S ++ ++N +L NPPFH A + Sbjct: 244 LASAKLSLQSNQLEG----NVFPSNVFSDIKE-KYNILLSNPPFHSGKNTDYTAAETFIN 298 Query: 325 HARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAV 372 + LK G+L IVANR L+Y L K F N +NKF VL + Sbjct: 299 QSTNHLKSKGKLSIVANRFLNYEGLLFKAFSNVKIDQESNKFKVLSCI 346 >UniRef50_C5CBM4 16S RNA G1207 methylase RsmC n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5CBM4_MICLC Length = 401 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 85/348 (24%), Positives = 145/348 (41%), Gaps = 14/348 (4%) Query: 39 LDDTEIRGPVLILNDAFGALSCAL--AEHKPYSIGDSYISELATRENLR------LNGID 90 + + GPV +L D GAL+ L A H D +E + NL G + Sbjct: 56 IASGHVPGPVAVLEDRHGALTLPLLMAGHDVRVHQDDASAERSLDANLAAWRAAGRLGGE 115 Query: 91 ESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTS 150 ++ + + + VL+ +P++L L++ R + V ++AG + + + Sbjct: 116 TGELERSATPEEAVRGARTVLLPLPRSLDELDRLSRIVAAVADPGVVLLAGGRDKHMSPR 175 Query: 151 TLELFEKVLGPTTTTLAWKKARLINCTFNEPQLAD-APQTVSWKLEGTD-WTIHNHANVF 208 + +KAR++ P + P+ + G + HA F Sbjct: 176 MNAVLGAAFEDVVAGRGRRKARVLTARGPRPGVTPRPPEEADRDVPGVGRLHLVAHAGTF 235 Query: 209 SRTGLDIGARFFMQHLPENLE--GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVA 266 D G+R + L ++ G +VDLGCGNG++ + P V+ D+S +AVA Sbjct: 236 GGAAADPGSRLLLTSLADDPRPPGRLVDLGCGNGLLSVGAARLWPHVTVLATDQSAVAVA 295 Query: 267 SSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHA 326 S+ N DR + ++AL+ VL NPPFH +A+ +VA + A Sbjct: 296 STLATARANR--VADRVRAVRDDALATWPDGTEECVLLNPPFHDGNAVDPSVAHRLVAAA 353 Query: 327 RRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKL 374 R L+ G L+ V N HL Y L+++ G A + F V + + Sbjct: 354 ARVLEPGGRLWCVWNSHLRYRPMLEELVGPTRQTARDRTFTVTVSERR 401 >UniRef50_Q47VN0 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Colwellia psychrerythraea 34H RepID=RSMC_COLP3 Length = 357 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 69/281 (24%), Positives = 118/281 (41%), Gaps = 11/281 (3%) Query: 97 LDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFE 156 ST +V+I PK+ A L L + + +T+II + + S +L + Sbjct: 79 FASTYQTTSCHDLVIIAFPKSKAELNFTLAMITHCINDETKIILVGEKKGGIQSAAKLTQ 138 Query: 157 KVLGPTTTTLAWKKARLINCTFNEPQLAD------APQTVSWKLEGTDWTIHNHANVFSR 210 + A + L F +L+D + +EG + TI + VFS+ Sbjct: 139 HIFSCCQKVDAARHCLLFVGLFQPERLSDVFNLQDWFKKYQITVEGIELTIASLPGVFSQ 198 Query: 211 TGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRL 270 LD+G + +LP + G+++D GCG GVI + K + +D S +A+ S++ Sbjct: 199 QKLDVGTALLLSNLPSKMTGKVLDFGCGAGVISCFIGKKFSGTNLSLLDVSALALTSAQE 258 Query: 271 NVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCL 330 ++ N +N+LS V + V+ NPPFHQ + + + L Sbjct: 259 SLALNGLSG----NVFPSNSLSDVNE-HYQHVVSNPPFHQGVKTHYQASEDFLAGINKKL 313 Query: 331 KINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 G + IVAN L Y ++ GN I + F + +A Sbjct: 314 NKQGNITIVANSFLRYQPIMETHIGNTRVITKDKGFTIYRA 354 >UniRef50_D2T448 Ribosomal RNA small subunit methyltransferase n=1 Tax=Erwinia pyrifoliae DSM 12163 RepID=D2T448_ERWPY Length = 447 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 84/355 (23%), Positives = 151/355 (42%), Gaps = 13/355 (3%) Query: 24 PLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATREN 83 + A+ A E +L+ D I+ VL D L L ++ + + + Sbjct: 105 SMSAFTPASEVILRH-SDEFIQRRVLFAGDLQDDLPAQLE----TALSRVHTQQYHHWQI 159 Query: 84 LRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAK 143 L + E++ L ++A ++ PK + QL+ L ++ + I + Sbjct: 160 LSR-VLGENAHYGLVASAAMVADCDTLVYYWPKNKPEAQYQLQNLLALLPVGSDIFVVGE 218 Query: 144 ARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHN 203 R S ++ E + ++ L + + DA + + T+ Sbjct: 219 NRSGVRSAEQMVESWAKLEKI-DSARRCGLYHGRLDSNSTFDA-DAFWDEYPLGELTVKT 276 Query: 204 HANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPM 263 VFSR GLDIG++ + L +++G+++D+GCG GV+ L +P+ ++ D + Sbjct: 277 LPGVFSRDGLDIGSQLLLSTLKPHMKGKVLDMGCGAGVLSAMLASFSPKVRLTLTDVNAA 336 Query: 264 AVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMF 323 A+ASS+ + N E + +N S + RF+ ++ NPPFH + + A + Sbjct: 337 AIASSKATLTANQLEG----DVFASNVYSDIS-GRFDMIISNPPFHDGVQTSLDAAQTLI 391 Query: 324 HHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR 378 A L GEL IVAN L Y L + FG+ + N +F V +AVK + Sbjct: 392 RGAVSHLNTGGELRIVANAFLPYPQVLDEAFGSHEVLLQNGRFKVYRAVKGRPAK 446 >UniRef50_C4LB19 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LB19_TOLAT Length = 350 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 69/278 (24%), Positives = 119/278 (42%), Gaps = 12/278 (4%) Query: 100 TADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVL 159 D Q+ VL+ +PK ++ + + I + R ++ +L + Sbjct: 78 LNDVEQKYDAVLLFMPKAKQEAALWFDSVLPSLKPNGDIFVLGENRGGISAAPKLLQPYA 137 Query: 160 GPTTTTLAWKKARLINCTFNEPQLADAP------QTVSWKLEGTDWTIHNHANVFSRTGL 213 + + L P ++ P T+ + I VFS L Sbjct: 138 DKVQKIDSARHCSLFYAQLVTPPVSSTPDSLFSHYTLQLTHDQAALKISALPGVFSAGEL 197 Query: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273 D G + + LP L G+I+D+GCG GVIG + + P A VV D + +A+ S+ +E Sbjct: 198 DEGTQLLLDSLPA-LSGDILDVGCGAGVIGAAICQRTPDANVVMTDVNALALLSATKTLE 256 Query: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKIN 333 N A + + ++ S VE +F+ ++ NPPFH H A LK Sbjct: 257 GNNLSA----QVIASDMFSDVE-AKFDFIISNPPFHAGLKTNYEATERFLHQAPAHLKRG 311 Query: 334 GELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 G+L++VAN+ L Y L +F + + I N++F +++A Sbjct: 312 GQLFLVANKFLRYEPILADVFHSVSVIKENSRFKIIRA 349 >UniRef50_Q65S65 Ribosomal RNA small subunit methyltransferase C n=30 Tax=Gammaproteobacteria RepID=RSMC_MANSM Length = 333 Score = 253 bits (646), Expect = 8e-66, Method: Composition-based stats. Identities = 69/278 (24%), Positives = 122/278 (43%), Gaps = 8/278 (2%) Query: 97 LDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFE 156 +D + + + +++ K ++ QL L ++ + R S ++ Sbjct: 61 VDFSVIFTGRADLIVYYWTKNKQEVQFQLMQLLANAPVGQEVLIIGENRSGVRSAEKMLA 120 Query: 157 KVLGPTTTTLAWKKARLINCTFNE-PQLADAPQTVSWKLEGT-DWTIHNHANVFSRTGLD 214 G + ++ L + T + P +++ + +++ VFS LD Sbjct: 121 -HFGDIGKIDSARRCGLYHFTLQKQPNFELENFWKTYRSPQLGELIVYSLPGVFSANELD 179 Query: 215 IGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVET 274 +G + + + +N+ G+++DLGCG GVIG + KNP AKV D MA+AS+ + Sbjct: 180 VGTQLLLSTVKDNIRGDVLDLGCGAGVIGSMIKLKNPPAKVTMTDIHAMALASAERTLLE 239 Query: 275 NMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKING 334 N + + ++ S VE +F+ ++ NPPFH E+ +A+ L G Sbjct: 240 NKLSG----QVLASDVFSHVE-GKFDLIISNPPFHDGIDTAYRAVRELISNAKWHLVPGG 294 Query: 335 ELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAV 372 EL IVAN L Y L + FG +A NKF V + Sbjct: 295 ELRIVANAFLPYPDLLDEYFGGHKVLAQTNKFKVYSVI 332 >UniRef50_Q6FE96 Ribosomal RNA small subunit methyltransferase C n=12 Tax=Acinetobacter RepID=RSMC_ACIAD Length = 338 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 78/332 (23%), Positives = 130/332 (39%), Gaps = 19/332 (5%) Query: 47 PVLILNDAFGALSCALAE-HKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQ 105 +L++N L+ LA H+ ++ + D +P Sbjct: 18 KILLINPPADELAQQLAHKHQVSVWTWNFADHQYFQHQS----------IQSDFAVTFPD 67 Query: 106 Q-PGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTT 164 Q P V+I VPK+ LL L + + + I + + + + G T Sbjct: 68 QIPDQVIIFVPKSKELLSYLLHVVVSHLPAGQHIFLVGEKKGGVERASKQL-QSYGKTVK 126 Query: 165 TLAWKKARLINCTFNE----PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFF 220 + + +L T L + S K E I+ VFS+ LDIG Sbjct: 127 LDSARHCQLWQTTIETTEQLKPLEQWLKHYSVKNENIQLEIYALPGVFSQNHLDIGTAVL 186 Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEAL 280 + +L + G+I D GCG GVI L +P ++ +D A+ S+ + N A Sbjct: 187 LPYLNQIKLGKIADFGCGAGVISAYLAQLSPHNEIHALDIDAFALRSTEFTFQRNGL-AS 245 Query: 281 DRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 340 +R + P + ++ NPPFHQ + + + A++ L +GEL+IVA Sbjct: 246 ERLHLHAVTGIQDA-PKALDVIVSNPPFHQGIHTDYSASEGLCKTAKQHLNTSGELWIVA 304 Query: 341 NRHLDYFHKLKKIFGNCTTIATNNKFVVLKAV 372 NR L+Y +++ FG C F +L A Sbjct: 305 NRFLNYPLLIEQTFGQCQVKTDQQGFKILYAK 336 >UniRef50_C7R392 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R392_JONDD Length = 394 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 96/373 (25%), Positives = 151/373 (40%), Gaps = 29/373 (7%) Query: 29 EAADEYLLQQLDDTEIR--------GPVLILNDAFGALSCALAEHKPYS----IGDSYIS 76 + D LL +L D + + ++N A +A+ P++ DS Sbjct: 20 DGVDRLLLAELTDLIAQHNDWAATLRHITVVNAIHPATVRDIAQLLPHATLTLWNDSCHD 79 Query: 77 ELATRENLRLNGIDESS-------VKFLDSTADYPQQPGV--VLIKVPKTLALLEQQLRA 127 + L V+ T D P VL+++PKT+ L+ Sbjct: 80 AVTLDTALAATQSAPPDSSQSNRIVRSTSPTLDAALTPDTTSVLMRLPKTVDTLDDFAHT 139 Query: 128 LRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAP 187 + + R +A + + + T + T +L K+R ++ + L A Sbjct: 140 IAAHASPRMRFLAAGRVKYMTTRMNDALAASFAAVTASLGRYKSRALHASMPHTPLPPAR 199 Query: 188 QTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL----EGEIVDLGCGNGVIG 243 L I + VFS T LD+G RF + LP L IVD+GCGNG++G Sbjct: 200 FPQQATLA--TIPIAAYGGVFSGTSLDVGTRFLLSTLPTALTDLQSARIVDVGCGNGLLG 257 Query: 244 LTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVL 303 + + +P V D S AV S+R V+ N DR +ALS + + V+ Sbjct: 258 VWIARHHPHVSVTMTDVSAQAVRSARATVDLN--NVGDRVSVRWMDALSQLPDHSADLVV 315 Query: 304 CNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATN 363 CNPPFH A+T A +F R L G + V N L Y L+++ G +AT+ Sbjct: 316 CNPPFHDGTAVTTTPAHRIFADVGRVLTPGGRMLTVFNTPLAYAPTLRRLVGPTRVLATH 375 Query: 364 NKFVVLKAVKLGR 376 KF + ++V GR Sbjct: 376 AKFTITESVTPGR 388 >UniRef50_A6FBK7 16S RNA G1207 methylase RsmC n=1 Tax=Moritella sp. PE36 RepID=A6FBK7_9GAMM Length = 344 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 66/280 (23%), Positives = 114/280 (40%), Gaps = 9/280 (3%) Query: 98 DSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEK 157 + ++ V LI + K+ A + L + + + I + S + F Sbjct: 70 STEYQAVKKHQVALIYMSKSKAEVTYLLANITEHLEDGAMIFMVGENNAGIRSANKFFAP 129 Query: 158 VLGPTTTTLAWKKARLINCTFNEPQLA----DAPQTVSWKLEGTDWTIHNHANVFSRTGL 213 A +++ L N+P D T + + T+ VFS L Sbjct: 130 YGDICNKLDAARRSSLFVTELNKPVAKFVQDDWVTTFPITVNSIELTVCTLPGVFSHGKL 189 Query: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273 D G++ + +L + G ++DLGCG G+IG + + P +KV D S +AV SS+L + Sbjct: 190 DTGSKILLNNLHKKPSGRVLDLGCGAGIIGSYIAKRFPASKVEMTDVSALAVKSSQLTLA 249 Query: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKIN 333 N + +++ S + +F+ ++ NPPFH A + Sbjct: 250 ANELAG----QAYLSDVYSDIS-GKFDYIISNPPFHAGLKTHYASTETFLKEANGYINPR 304 Query: 334 GELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 G L +VAN L Y ++ FG+C ++KF V A K Sbjct: 305 GHLVLVANSFLKYPEIIEASFGHCLLQIKSSKFAVYYANK 344 >UniRef50_C6APC6 Ribosomal RNA small subunit methyltransferase C n=3 Tax=Pasteurellaceae RepID=C6APC6_AGGAN Length = 334 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 9/287 (3%) Query: 86 LNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKAR 145 N ++ +D + ++ +Q ++L K QL + I+ + R Sbjct: 52 TNRENQKQQSAVDFSLEFQRQADLILFYWTKNKQECHFQLMQILAKSPVGQEILIVGENR 111 Query: 146 DIHTSTLELFEKVLGPTTTTLAWKKARLINCTF-NEPQLADAPQTVSWKLEGT-DWTIHN 203 S + G + ++ L + N P S++ D T++ Sbjct: 112 SGVRSVENMLAD-FGDIHKIDSARRCSLYHFQLENPPHFELNSFWKSYQSPQLADVTVYA 170 Query: 204 HANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPM 263 VFS LD G + L +N+ G+++D+GCG GVIG + +P+ K+V D M Sbjct: 171 LPGVFSAAELDGGTVLLLSTL-KNVSGDVLDIGCGAGVIGSYIQKHHPKTKLVMTDIHAM 229 Query: 264 AVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMF 323 A+ S++ + N + + ++ S VE +F+ ++ NPPFH E+ Sbjct: 230 ALESAQRTLRENQLQG----TVLASDVFSHVE-GKFDLIISNPPFHDGIDTAYTAVNELI 284 Query: 324 HHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLK 370 A+ LK GEL IVAN L Y L + FG +A NNKF V Sbjct: 285 KQAKWHLKAGGELRIVANAFLPYADWLDQHFGGHEVLAKNNKFKVYS 331 >UniRef50_Q2SJX3 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Hahella chejuensis KCTC 2396 RepID=RSMC_HAHCH Length = 342 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 83/336 (24%), Positives = 136/336 (40%), Gaps = 13/336 (3%) Query: 42 TEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTA 101 ++ G +L+ + A++ L + S+ T N + E + F D Sbjct: 16 GQLSGRILLCSPPADAIAAELRQTGVEVSVLSW---DHTAVNACRGAVAEEWL-FTDLAL 71 Query: 102 DYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGP 161 Q + + +PK LL+ L + + I + R+ S + K Sbjct: 72 PADAQWDQIALFMPKARELLDLMLSVVAPALKHAQHIWLVGEKREGVESAAKRLAKEDWD 131 Query: 162 TTTTLAWKKARLINCTFN---EPQLADAPQTVSWKLEGTD-WTIHNHANVFSRTGLDIGA 217 T + + ++ + T +P+ D + E D + VFS LD G Sbjct: 132 ATKVDSARHCQVWSLTPPADWKPKQNDFWRAYELAQEKVDTLQLFTLPGVFSAGRLDEGT 191 Query: 218 RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP 277 +Q LPE ++D GCG GVIG TL + P+A V D + +A+ S+ E N Sbjct: 192 EVLLQSLPELHGRRLLDFGCGCGVIGATLKKRYPKASVELTDINLLALKSAARTAEANGV 251 Query: 278 EALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELY 337 E ++ L+ V+P +A++ NPPFHQ V + R LK G L Sbjct: 252 E----LNVYASDGLAEVQPG-VDAIITNPPFHQGVKQDTRVTQQFLRDCARVLKPGGSLT 306 Query: 338 IVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 +VANR L Y ++ G + N++F V AV+ Sbjct: 307 LVANRFLPYPDWIEAHVGPVRVLFENSRFKVYHAVR 342 >UniRef50_D1YE28 Methyltransferase small domain protein n=3 Tax=Propionibacterium acnes RepID=D1YE28_PROAC Length = 334 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 84/318 (26%), Positives = 138/318 (43%), Gaps = 22/318 (6%) Query: 62 LAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALL 121 +AE + + D E +RLN + V VV + +P +L L Sbjct: 34 VAEGRVAAWADDCRDLADIPEAIRLNPLTAGDVSDSP----------VVWMSLPASLDEL 83 Query: 122 EQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEP 181 ++ L L +++ D I+AG + + + S ++ + +L +KAR+++ F+ P Sbjct: 84 DELLGTLWRILGPDAHIVAGGRIKHMSRSMNDVAARWFNEVHASLGVRKARVLH--FSSP 141 Query: 182 QLADAPQTVSWKLEGT--DWTIHNHANVFSRTGLDIGARFFMQHLPE---NLEGEIVDLG 236 + A T +W T TI H VF G+D G + +L ++ + VDLG Sbjct: 142 RQRPA-ITGTWPRTNTVNGLTIRAHGGVFHTAGVDAGTSLLLDYLDAIAADVHSDAVDLG 200 Query: 237 CGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 296 CGNGVI L PQA + D S AV S+RL + N + + L V Sbjct: 201 CGNGVISAHLARLLPQATIHATDVSWQAVDSTRLTAQANQLNIVT----HWCDGLVDVPH 256 Query: 297 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGN 356 + V+ NPPFH+ A M A R L+ G L+ V N HL + +++ G Sbjct: 257 ESVDVVVTNPPFHRGTAQDHAPTLAMLADAARVLRPGGTLWCVYNNHLPWASHVRRTIGP 316 Query: 357 CTTIATNNKFVVLKAVKL 374 + N ++ V++ V+ Sbjct: 317 TRQVVRNRRYTVIRTVRR 334 >UniRef50_Q1MZV1 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Bermanella marisrubri RepID=Q1MZV1_9GAMM Length = 335 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 82/351 (23%), Positives = 143/351 (40%), Gaps = 29/351 (8%) Query: 33 EYLLQQLDDTEIRGPVLILN---DAFGALSCALAEHKPYSIGDSYISELATRENLRLNGI 89 + LLQQ ++ L++N D LA+ P + S N + Sbjct: 8 QLLLQQ----DLPEHALLVNPPHDD-------LAQSIPSGWHAACFSH-------STNTV 49 Query: 90 DESS-VKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIH 148 E+ + + A +++ +PK+ L+ + + D I + + Sbjct: 50 FETQGFETVSVLAPKQHAYQSIIVYLPKSKNRLQYVIDYCCSSLADDGEIWFVGENKGGI 109 Query: 149 TSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWK--LEGTDWTIHNHAN 206 S + +K+ + A K I D ++ + D + Sbjct: 110 KSLAKQTKKLFEQSDK-FATGKHSAIVSASKPLTAKDFELQTYYQNQVNELDMHVQALPG 168 Query: 207 VFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVA 266 VFS+ LD G +++LP ++G ++D GCG GVIG + ++ +D+ +AV Sbjct: 169 VFSQEKLDKGTEVLLKNLPRKIKGRVLDFGCGAGVIGCYVQQHREVDEIDMLDDDLLAVK 228 Query: 267 SSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHA 326 S++ +E N ++ E +N VE R+N ++ NPPFHQ V + A Sbjct: 229 SAQRTIEKN---SIPYAEAFASNGFDEVED-RYNWIISNPPFHQGVKTHYEVTEQFLAKA 284 Query: 327 RRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRR 377 + LK++G+L IVAN L Y LK F +A N F VL+ + R+ Sbjct: 285 KDHLKLSGKLLIVANEFLSYEVILKYHFKMVKEVARENGFKVLQCEGIMRK 335 >UniRef50_B4S2L3 Ribosomal RNA small subunit methyltransferase C n=2 Tax=Alteromonas macleodii RepID=RSMC_ALTMD Length = 360 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 84/346 (24%), Positives = 135/346 (39%), Gaps = 18/346 (5%) Query: 31 ADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGID 90 +D Y L L E V +++ F AE S+ S T + ++ Sbjct: 28 SDAYFLDGLKSQE----VTVIHQYFD----IFAECVRVIPSASFDSRDITSKGFEVSQKV 79 Query: 91 ESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTS 150 + + V+I +PK + LR +V + RI + + S Sbjct: 80 GNHTHIFTPFVALEKSHTDVMISLPKAKTHFQMLLRMAASMVGQNGRIHVVGENKGGIKS 139 Query: 151 TLELFEKVLGPTTTTLAWKKARLINCTFNEPQLA----DAPQTVSWKLEGTDWTIHNHAN 206 +L ++ G T + + LI P LA T ++ +EGT W + + Sbjct: 140 AAKLMQQY-GATQKVDSARHCSLITVIVEAPHLAFEAEAWIDTNTYAVEGTSWKVASMPG 198 Query: 207 VFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVA 266 VFS LD G ++ L +L G+++D CG GVI ++ K P K+ D S +A+ Sbjct: 199 VFSYKELDAGTELLLEKLSTSLSGDVLDFACGAGVIASYIMLKYPHLKLHLTDVSALAIY 258 Query: 267 SSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHA 326 S L + N A + L G+ + ++ NPPFH V A Sbjct: 259 CSALTLAENQLAA----TLYAADGLHGMT-NKVQHIVTNPPFHTGIKTDYTVTKRFISDA 313 Query: 327 RRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAV 372 + L G + +VANR L Y L + F T A ++F V +A Sbjct: 314 KARLTRGGTMQMVANRFLPYPGLLSEHFQTVYTTAQTSQFSVYQAT 359 >UniRef50_D0SZB9 16S RNA methylase RsmC n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SZB9_ACILW Length = 344 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 74/275 (26%), Positives = 118/275 (42%), Gaps = 7/275 (2%) Query: 101 ADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLG 160 + +I VPK+ LL L + + + I + + + + G Sbjct: 64 EMPEAEFDQAVIFVPKSKELLNYLLHNVAAQLKPGSSIFLVGEKKGGIERAAKQL-QPFG 122 Query: 161 PTTTTLAWKKARL----INCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIG 216 T + + +L + T + LAD Q + D I VFS+ LD+G Sbjct: 123 KTLKLDSARHCQLWQLVLEHTVEKKALADWAQRYTVSTPNGDLNICALPGVFSQNRLDVG 182 Query: 217 ARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM 276 + +L + G+I D GCG GVI L NP+ ++ +D A+AS+++ E N Sbjct: 183 TATLLPYLSQVTSGKIADFGCGAGVISAYLAKLNPKNRIFAMDVDAFALASTQMTFEENQ 242 Query: 277 PEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGEL 336 ++ E + P +A++ NPPFH + + +RR LK GEL Sbjct: 243 L-IPEQIEIKAVKGIEDA-PLFLHAIVSNPPFHMGIETDYTASETLCKISRRHLKSGGEL 300 Query: 337 YIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 +IVANR L+Y +++ FG CT A F VL A Sbjct: 301 WIVANRFLNYPTLIEQNFGRCTVKADQQGFKVLFA 335 >UniRef50_Q15ZS7 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Pseudoalteromonas atlantica T6c RepID=RSMC_PSEA6 Length = 343 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 74/348 (21%), Positives = 138/348 (39%), Gaps = 12/348 (3%) Query: 30 AADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGI 89 AA + LL+ ++ +G L++N G + AL+ + Y + + + + G Sbjct: 4 AASQVLLRS-EELLEQGKWLLVNPTDGHVFSALSNPEVYGFHQFFDIYEQSIASAKAQGR 62 Query: 90 DESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHT 149 D + D ++ +PK A + L + + ++ + + Sbjct: 63 DTQ--HQFVAAYDTDASFDGAVLYLPKAKAHGQMLLANIVACLKPGGTLLVVGENKGGIK 120 Query: 150 STLELFEKVLGPTTTTLAWKKARLINCTFNEP----QLADAPQTVSWKLEGTDWTIHNHA 205 S +L + + + ++P + ++ + + + Sbjct: 121 SAAKLLTPYSDNVNKIDSARHCAMFAAVVDKPVASFDITKWQDVSEHQVADISFKVCSLP 180 Query: 206 NVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAV 265 VFS LD G + + ++ + G I+D CG G+IG KNPQA+VV D S +A+ Sbjct: 181 GVFSHGELDTGTQLLLDNIDRVVSGRILDFACGAGIIGCFAGLKNPQAQVVMSDVSALAI 240 Query: 266 ASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHH 325 S+ + E N +A + + +N L + +F V NPPFH +V Sbjct: 241 YCSQKSAELNGVKA----QVIPSNGLGALT-GKFAQVFTNPPFHTGIKTDYSVTEGFMQQ 295 Query: 326 ARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 + L+ G L +VAN+ L Y +L K F + T+ KF V + Sbjct: 296 LKNHLQDRGSLILVANKFLRYADELDKQFKSVQTLTETTKFSVYCCRR 343 >UniRef50_A3WQL8 16S RNA G1207 methylase RsmC n=1 Tax=Idiomarina baltica OS145 RepID=A3WQL8_9GAMM Length = 339 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 74/281 (26%), Positives = 126/281 (44%), Gaps = 10/281 (3%) Query: 99 STADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKV 158 + + + ++L+ V K +L + L L + RI+ + R TS ++ Sbjct: 65 ALSPKLEAYQLILLVVAKEQSLNQWILHQL-SLQAPSARILIVGEKRGGVTSLVKKLPPA 123 Query: 159 LGPTTTTLAWKKARLINCTFNEPQLADAPQT----VSWKLEGTDWTIHNHANVFSRTGLD 214 + +L L D+ G + + VFS+ LD Sbjct: 124 FLKAQKLASGNHCQLFQTRVLTKPLTDSEAPALSGFDVDWRGVSASFSAYPGVFSQGRLD 183 Query: 215 IGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVET 274 G ++HLPE ++G+++D CG GVIG + K ++ D SPMA+AS+++N E Sbjct: 184 AGTALLLEHLPETIQGKVLDFACGCGVIGALVAQKF-AVELTASDVSPMAIASTQMNWEK 242 Query: 275 NMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKING 334 + ++ + LS + FN +L NPPFH ++ + A + L NG Sbjct: 243 LGIQG----RLILADGLSSLSDGSFNWILSNPPFHTGLRTDYDIGEQFIKQAFKKLAPNG 298 Query: 335 ELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLG 375 L IVANR L + ++++FG+C +A N KF VL + +L Sbjct: 299 TLVIVANRFLPWPEHMRQVFGHCDELADNGKFKVLLSKRLS 339 >UniRef50_UPI0000E105EB rRNA (guanine-N(2)-)-methyltransferase n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E105EB Length = 362 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 71/285 (24%), Positives = 125/285 (43%), Gaps = 19/285 (6%) Query: 107 PGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTL 166 ++ +PK L L L VV + +I + S + EKV Sbjct: 73 YDAAIVYMPKVKTHLGMLLANLSNVVKTGGQIFIVGHNKSGIKSCAKHLEKVCDTVNKVD 132 Query: 167 AWKKARLINCTFNEPQ----LADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQ 222 + K L T L D T +++L W + +VFS+ LD+G +Q Sbjct: 133 SAKHCGLFVGTVKANPKAFNLDDFLTTKTYELNEIKWEVAGMPSVFSQDALDLGTHLLLQ 192 Query: 223 HLPENLEGEIVDLGCGNGVIGLTLLDKN----------PQAKVVFVDESPMAVASSRLNV 272 HLP+N++ +++D CG GVI + ++ P +V D +++ ++ + Sbjct: 193 HLPQNIKNDVLDFACGAGVIAAFVGVRHLHTFPDPNNRPNLHLVLSDIHALSLYCAQKTL 252 Query: 273 ETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKI 332 N + + + +N LS VE +F+ ++ NPPFH+ ++A AR L Sbjct: 253 HLNNLQG----DVVASNGLSNVE-GKFSHIITNPPFHKGINTDYSIAHSFLVQAREHLIE 307 Query: 333 NGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRR 377 G L +VAN L+Y +++ G C + ++NKF V +AV + + Sbjct: 308 QGHLTLVANSFLNYAVDMEEHVGPCQKLISDNKFAVYQAVGIRPK 352 >UniRef50_Q3ILJ2 Ribosomal RNA small subunit methyltransferase C n=3 Tax=Alteromonadales RepID=RSMC_PSEHT Length = 341 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 76/342 (22%), Positives = 150/342 (43%), Gaps = 13/342 (3%) Query: 34 YLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESS 93 LL + + + +L++N L + P S ++ A E + + Sbjct: 9 LLLLRNSEKLVGKSILVVNFVQDGFLAELKKRNPESKITAFSYNHANGEFAKNTPGVDVC 68 Query: 94 VKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLE 153 V S D+ +V++ PK+ + L +R V+T+D ++ + + S + Sbjct: 69 VNHCISGNDF----DLVILYYPKSKPEVLMALDNIRAVITADAELLVVGENKSGVKSIEK 124 Query: 154 LFEKVLGPTTTTLAWKKARLIN----CTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFS 209 + + K L + ++ ++D + + + +++T + VF+ Sbjct: 125 QLTDKANFSNKIDSAKHCVLYSFAELKQLSQFNISDYHKPFTVSVADSEFTAISIPGVFN 184 Query: 210 RTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSR 269 LD+G + +++ P +G ++D GCG G+I L +NP V D S +A+ ++ Sbjct: 185 HGNLDVGTKILLENAPLIKQGTVLDFGCGAGLIATYLGLQNPALSFVCSDVSALAIYATT 244 Query: 270 LNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRC 329 ++ N + E ++++ L+ + +F+ ++ NPPFH A VA +A++ Sbjct: 245 QTLKLNNIKG----EALLSDGLTNIT-GKFDLIISNPPFHTGIATDYTVAETFLANAKQH 299 Query: 330 LKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 L G+L IVAN L Y L+ F N T+ NNKF V + Sbjct: 300 LTKAGKLNIVANSFLKYPPILEAQFDNYQTVFKNNKFAVYSS 341 >UniRef50_Q2NW11 Ribosomal RNA small subunit methyltransferase C n=164 Tax=Bacteria RepID=RSMC_SODGM Length = 350 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 83/348 (23%), Positives = 132/348 (37%), Gaps = 14/348 (4%) Query: 31 ADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGID 90 A E +L+ DT V+I D L L + ++ T + Sbjct: 7 ASEVILRH-QDTFSDKQVVIAGDVQDLLPARLEARSVK-VHTAWFHHRQTLARA----LG 60 Query: 91 ESSVKF-LDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHT 149 E +V+F L + A ++ PK QL L ++ + + R Sbjct: 61 EQAVQFGLVADAALGGGCDTLIYYWPKNKPEALFQLTNLLSLLPLGCDVFVVGENRSGVR 120 Query: 150 STLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFS 209 S + A + +P+ S++LE D I VFS Sbjct: 121 SAEPMLAAWCPLAKIDSARRCGLYHGELVQQPRFDAEAFWQSYQLE--DVVIKTLPGVFS 178 Query: 210 RTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSR 269 R GLD G++ + +G + D+GCG GV+ L ++ D A+A+SR Sbjct: 179 RDGLDNGSQLLLSTFDRPFQGHVADIGCGTGVLSAVLAKGAAGVQLTLSDAHAPALAASR 238 Query: 270 LNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRC 329 + N + E + + S + RF+ ++ NPPFH A + A Sbjct: 239 ATLAVNGLQG----EVLAGDVYSAIS-GRFDMIISNPPFHDGMQTNLKAAETLIRGALNH 293 Query: 330 LKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRR 377 L+I GEL IVAN L Y L +FGN + N +F V +A+ +R Sbjct: 294 LRIGGELRIVANAFLPYPDLLDAVFGNHQVLVQNGRFKVYQAIHQVKR 341 >UniRef50_A3D8E4 Ribosomal RNA small subunit methyltransferase C n=21 Tax=Shewanella RepID=RSMC_SHEB5 Length = 347 Score = 233 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 82/341 (24%), Positives = 135/341 (39%), Gaps = 20/341 (5%) Query: 40 DDTEIRGPVLILNDAFGALSCALAEHKPYSIGDS------YISELATRENLRLNGIDESS 93 D+ + VL+LN A A + D+ + LA N +L Sbjct: 13 QDSLSQHKVLVLN--HEADLLPKALLDVAASVDALALDYHHYLHLAPHANTKLRCYFGHD 70 Query: 94 VKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLE 153 + D ++ V++ PK L + + +++ + + S ++ Sbjct: 71 LPHQDPLE--REKYDTVIVYFPKAKPLAPYLFNLAANHLVPNGQLLVVGENKGGIKSLVK 128 Query: 154 LFEKVLGPTTTTLAWKKARL----INCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFS 209 L + + L + + +L+D + +I N VFS Sbjct: 129 LLPEYFATGMKLDNARHCLLFGSSLEGSAPAMKLSDWVSQYQLTTPQGEISICNLVGVFS 188 Query: 210 RTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSR 269 LD+G + HLP L G ++D GCG GVI LL P + VD + MA+AS Sbjct: 189 EKRLDLGTELLLSHLP-TLSGRVLDFGCGAGVIAAALLKAQPSLSLECVDINAMALASCE 247 Query: 270 LNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRC 329 L + N A + ++ L+ +FN ++ NPPFH A T ++A + + Sbjct: 248 LTLAANGMTA----KVYPSDGLAQTT-GKFNGIISNPPFHDGLASTTSIAQNFVTDSAKQ 302 Query: 330 LKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLK 370 L+ NG IVANRHL Y + FG +A NNK+ + Sbjct: 303 LQHNGIWQIVANRHLPYSDIIAAEFGQLKVVADNNKYKLYY 343 >UniRef50_B5JVE3 Ribosomal RNA small subunit methyltransferase C n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVE3_9GAMM Length = 353 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 65/280 (23%), Positives = 115/280 (41%), Gaps = 13/280 (4%) Query: 103 YPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPT 162 + Q P V++KVPK+ + + L L + +T ++ +L ++ Sbjct: 78 FRQPPAAVVLKVPKSRSRTDFLLAQLAHCLPENTAFYLVGHKKEGIEGGAKLLKQRASTV 137 Query: 163 TTTLAWKKARLINCTFNEPQLADAPQTVSWKL---EGTDWTIHNHANVFSRTGLDIGARF 219 + + +L ++L E + VFS LD G R Sbjct: 138 DKRDSARHCQLWRAELAPQAFDPEAWLQPFELPVPEAAPLQLATLPGVFSLGKLDRGTRV 197 Query: 220 FMQHL---PENLEGE--IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVET 274 + +L P +++ + ++D G G I L L + + VD S +A+ + +N + Sbjct: 198 LLDNLHSTPLSIKKDAPLLDFAAGAGPIALWLKRRYADLNITLVDVSAIALFCAWMNAQV 257 Query: 275 NMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKING 334 N E + + + L GV + A++ NPPFH +A + + + LK G Sbjct: 258 NDMEVVCQ----QADGLQGV-DGEWQAIVSNPPFHTGVETDYRIAEQFIQTSWQRLKRGG 312 Query: 335 ELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKL 374 EL +VAN HL Y ++ FG C +A + F V +A K Sbjct: 313 ELRLVANGHLPYAEWIEAQFGQCERLANEDGFHVYRAFKR 352 >UniRef50_D1BX92 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BX92_XYLCX Length = 440 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 101/388 (26%), Positives = 168/388 (43%), Gaps = 42/388 (10%) Query: 29 EAADEYLLQQLDDTEIRGP-------VLILNDAFGALSCALAE---HKPYSIGDSYISEL 78 +A D LL + R V+++ D FGAL+ LA S D+ SE Sbjct: 55 DATDRLLLDEARPLLARPEAGSALDDVVVIGDRFGALAVGLAALGRRGVRSHTDAVTSER 114 Query: 79 ATRENLRLNGIDES-----SVKFLDSTAD-YPQQPGVVLIKVPKTLALLEQQLRALRKVV 132 A ENLR ++ DS + +VL+++P++LA L++ + + Sbjct: 115 AVTENLRTAHRGPLLGQTFDLRQHDSLEPGLVRGARLVLLQLPRSLAELQEVAELVAREA 174 Query: 133 TSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAP--QTV 190 D ++AG + + + + ++ + TLA K+R++ P+ AP V Sbjct: 175 ADDVVLLAGGRVKHMTHAMNDVLARSFEDVRATLARGKSRVLVARRPRPEARTAPPSYPV 234 Query: 191 SWKLEGTDW---------------------TIHNHANVFSRTGLDIGARFFMQHLPE-NL 228 + L + + H VF+ LD+G R ++ Sbjct: 235 TATLHDAELLAAARLSLDSRADDGGSGGGIAVVAHGGVFAGAALDLGTRALLRTADRWPD 294 Query: 229 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN 288 + VDLGCG G++ L ++P +VV D S A AS+R N +R + + Sbjct: 295 AADAVDLGCGTGLLATVLALRDPHVRVVATDRSAAAAASARATARANG--VGERVVVLRD 352 Query: 289 NALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFH 348 +A G EP + VLCNPPFH + A++ + A MF A R L+ GEL+ V N L Y Sbjct: 353 DAGQGEEPASADLVLCNPPFHDRAAVSTDAAHRMFAAAARVLRPGGELWCVYNSVLRYRP 412 Query: 349 KLKKIFGNCTTIATNNKFVVLKAVKLGR 376 L++ G ++ + +F V ++V+ R Sbjct: 413 ALERTVGPTEQVSRDPRFTVTRSVRTAR 440 >UniRef50_A0KPP9 Ribosomal RNA small subunit methyltransferase C n=3 Tax=Gammaproteobacteria RepID=RSMC_AERHH Length = 342 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 65/270 (24%), Positives = 114/270 (42%), Gaps = 10/270 (3%) Query: 107 PGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTL 166 +L+ +PK A + L + ++ + + + R +L Sbjct: 78 FDALLLLMPKAKAEAQYLLAMMTPLLEAGAELFLAGENRGGINGADKLLAPYGDKPVKRD 137 Query: 167 AWKKARLINCTFNEP----QLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQ 222 + ++ L + ++P +L + T+ T+ VFS + LD+G++ + Sbjct: 138 SARRCSLYHGELSKPVEPFELDSWFGRYQCQAGDTELTVLALPGVFSASELDLGSQMLLA 197 Query: 223 HLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDR 282 LP ++G ++D GCG GVIG L +NP KV VD + +A+ SSR + N + Sbjct: 198 SLPA-MQGSLLDFGCGAGVIGSVLAKRNPGLKVTMVDINALALESSRRTLAINGLQG--- 253 Query: 283 CEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 342 E ++ S ++ +F ++ NPPFH A L+ G L IVAN Sbjct: 254 -EVWASDVYSDIQ-GKFGRIVSNPPFHAGLKTFYAATETFLAKAPDHLQSQGSLTIVANA 311 Query: 343 HLDYFHKLKKIFGNCTTIATNNKFVVLKAV 372 L Y L+ F I+++ KF V + Sbjct: 312 FLRYQPILETHFKRTEVISSDAKFKVYLSK 341 >UniRef50_Q1QUF2 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=RSMC_CHRSD Length = 333 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 81/325 (24%), Positives = 128/325 (39%), Gaps = 21/325 (6%) Query: 61 ALAEHKPY-----SIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVP 115 L P+ ++G S S AT D ++ P Sbjct: 21 WLWVAPPHDAWLHTVGGSVWSADATICQAWRAR---GRPVHADLAPTLTAPVPGAVLFWP 77 Query: 116 KTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLIN 175 KT AL E L AL + T + + + L+ + + ++ L Sbjct: 78 KTHALGEWWLLALCAALPEGTPLQVVGEHQGGVKRVLKSLAALGLGCRKVDSARRCTLYA 137 Query: 176 CTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEG----E 231 +LA +P+ + E T+ +H VF LD G R ++ LP L Sbjct: 138 TR--TARLALSPEAAWTRFEAAGLTLESHPGVFGHGKLDDGTRQLLEVLPTALGDPAGQR 195 Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 ++D+GCG+G++G L + A+V VD AVA++R + N + + Sbjct: 196 VLDVGCGDGILGAWLGVR--GAQVAAVDLDAFAVAATRRTFQANGVAGEAWQSDVFGDV- 252 Query: 292 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLK 351 ++A++ NPPFHQQ A+ A + A L G L +VAN L Y L+ Sbjct: 253 ----SGSYDAIVSNPPFHQQRAIDYGPAERLIREAPARLVPGGRLVLVANAFLPYPRWLE 308 Query: 352 KIFGNCTTIATNNKFVVLKAVKLGR 376 FG T +A + +F V +AVK R Sbjct: 309 DAFGEFTVLADDRRFRVYQAVKTRR 333 >UniRef50_C7MEY2 16S RNA G1207 methylase RsmC n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MEY2_BRAFD Length = 411 Score = 227 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 92/380 (24%), Positives = 160/380 (42%), Gaps = 36/380 (9%) Query: 29 EAADEYLLQQLDD--TEIRGPVLILNDAFG---ALSCALAEHKPYSIGDSYISELATREN 83 + D ++ ++ T +++++DA G A + A P ++ S+ S L + Sbjct: 33 DQTDRVIIAAAEEIGTGCPCGLIVVDDATGELTAFALASVAEHPDAVVLSWTSSLPLATS 92 Query: 84 LRLNGIDE-----------SSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVV 132 LR + V L+ A + +VL+++PK + LE + R L V Sbjct: 93 LRERFAGQIEAGRLHVPAGPDVLPLEQAAAEVEGHLLVLMRLPKAVHALEDRARRLAAAV 152 Query: 133 TSDTR----IIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCT-----FNEPQL 183 + + IIAG + + + + + V + K+R + T P Sbjct: 153 RTGGQDGLGIIAGGRVKHMTRAQNDALATVFSEVRASRGIGKSRALIATELRASSAAPVA 212 Query: 184 ADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL-EGEI---------V 233 D V+ + + + + VF D G+R +Q L L G++ Sbjct: 213 IDGSARVAVRGQQRELALRGVGAVFGGASADAGSRLLLQALDRALVSGDLTADAPVTAAA 272 Query: 234 DLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG 293 DLGCGNG++ L P+A V+ D AV+S+R + N E + E ++ALS Sbjct: 273 DLGCGNGLMTAHLAAALPEASVLGSDADADAVSSTRATLAANALE-REEVEVSWDDALSR 331 Query: 294 VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKI 353 V + VL NPPFH ++ + + A R L+ G+L+ V N HL Y ++++ Sbjct: 332 VADSSLDLVLLNPPFHDGTSVDATLVQGLLDTAARVLRPGGQLWFVHNSHLRYRTEVERR 391 Query: 354 FGNCTTIATNNKFVVLKAVK 373 G A + +F VL AV+ Sbjct: 392 AGAVQQRARDRRFTVLSAVR 411 >UniRef50_A6VRG3 Ribosomal RNA small subunit methyltransferase C n=2 Tax=Marinomonas RepID=RSMC_MARMS Length = 353 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 76/323 (23%), Positives = 129/323 (39%), Gaps = 17/323 (5%) Query: 65 HKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQ 124 Y+ S A LR+ DE ++ ++I PK LL+ Sbjct: 38 ADVYAWCQSKTYYDAL---LRVGFADEKLFLSEQWALEHGSDFDHIVIYQPKAKELLDYL 94 Query: 125 LRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQ-- 182 L ++ ++ +I + S+++ E L K L P Sbjct: 95 LASVLPLLKEGGQIWLVGDNKSGVKSSMKRLEAGLDEVGKRDGAKHCLLYTGYKRRPTKP 154 Query: 183 --LADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPEN------LEGEIVD 234 D T ++ G T+ + VF LD G + L ++ I+D Sbjct: 155 FVFEDWITTWKQEVAGQTLTLCSLPGVFGHGKLDKGTDILLNQLNQHRFMSDVASARILD 214 Query: 235 LGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV 294 GCG+G+I L L +K A++ +D+S MA+ ++ L N + D + +N L V Sbjct: 215 FGCGDGIIALWLHNKT-GARITALDDSVMALKATELTFAAN--QVSDAVTLIASNGLDEV 271 Query: 295 EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIF 354 + RFN V+ NPPFH ++A F ++ L +NGEL++VAN L Y L Sbjct: 272 K-GRFNYVVTNPPFHSGVNTDYSIAESFFMMVKQHLTLNGELFVVANDFLRYPPILDAAL 330 Query: 355 GNCTTIATNNKFVVLKAVKLGRR 377 G+ T + + F + + ++ Sbjct: 331 GSHTRLYRDRGFAIYHGRQPKKK 353 >UniRef50_A5VYJ3 Ribosomal RNA small subunit methyltransferase C n=23 Tax=Pseudomonadaceae RepID=RSMC_PSEP1 Length = 332 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 81/345 (23%), Positives = 134/345 (38%), Gaps = 23/345 (6%) Query: 33 EYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDES 92 E LL+Q + +GP+LI GA + L P + ++ + R G Sbjct: 6 EVLLRQAE--LFQGPLLIA----GAPADDLLGQLPQAQAWTWHAGDQAMLESRFAGRSHY 59 Query: 93 SVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTL 152 V ++ +PK+ L L L + + G K I + Sbjct: 60 GV------EAPEAAFESAVLFLPKSRELAAYLLNTLASRLAGRELYLVGEKRGGIEGAAK 113 Query: 153 ELFEKVLGPTTTTLAWKKARLINCTFNEPQ----LADAPQTVSWKLEGTDWTIHNHANVF 208 +L G + + +L T ++ L + LE + + VF Sbjct: 114 QLAA--FGKPRKLDSARHCQLWQVTIDQAPQAKPLESLAERFELALEDGPLQVVSLPGVF 171 Query: 209 SRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASS 268 S LD G ++HL G ++D GCG GV+G TL + PQ++V +D AVA+S Sbjct: 172 SHGRLDRGTALLLKHLDGLPGGHMLDFGCGAGVLGATLKRRYPQSRVTLLDVDAFAVAAS 231 Query: 269 RLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARR 328 RL + N E E + + + P + +L NPPFH + + + Sbjct: 232 RLTLAANGLEG----EVISGDGIDAA-PTELSLILSNPPFHTGVHTNYQASENLLKKSAV 286 Query: 329 CLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 L+ GE+ +VAN L Y ++ GNC + F + +A + Sbjct: 287 HLRKGGEMRLVANSFLRYQPLIEGALGNCQVRDEADGFRIYQATR 331 >UniRef50_Q1GDK1 Methyltransferase small n=13 Tax=Rhodobacteraceae RepID=Q1GDK1_SILST Length = 328 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 70/271 (25%), Positives = 115/271 (42%), Gaps = 14/271 (5%) Query: 107 PGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTL 166 ++ +P++ L +QL A T ++ GAK I + EL ++ + Sbjct: 71 YDAAVVFIPRSKP-LARQLVAQAVAATQGPVLVDGAKTDGIDSLLKELNKRTRPSHAISK 129 Query: 167 AWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPE 226 A KA I + P V D VFS +D + + LP+ Sbjct: 130 AHGKAFCIEGGIDLSDWVPGPSEV-------DGGFVTAPGVFSADAIDPASALLARALPK 182 Query: 227 NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFM 286 L E+ DLG G G + +L ++ + V+ +A+ ++ NV EF Sbjct: 183 KLGKEVADLGAGWGYLSAEILRRSNLETLHLVEADHVALTCAQTNVTD------AHAEFH 236 Query: 287 INNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY 346 +A S + +AV+ NPPFH A ++ +A R LK G+L++VANRHL Y Sbjct: 237 WADARSWGQKGSLDAVVMNPPFHSGRAAEPSLGQAFIANAARLLKPAGQLWMVANRHLPY 296 Query: 347 FHKLKKIFGNCTTIATNNKFVVLKAVKLGRR 377 L + F + A +N+F +L V+ R+ Sbjct: 297 EALLGECFVSFEEAAGDNRFKILHGVRPRRK 327 >UniRef50_Q0VP64 Ribosomal RNA small subunit methyltransferase C n=2 Tax=Alcanivorax RepID=RSMC_ALCBS Length = 325 Score = 223 bits (568), Expect = 9e-57, Method: Composition-based stats. Identities = 76/343 (22%), Positives = 131/343 (38%), Gaps = 28/343 (8%) Query: 33 EYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDES 92 + LL+Q D VL+++ AL + + D Y Sbjct: 6 QLLLRQ-SDALAGRNVLVVDANDPALKTLSVDATVHVHADDYTIGA-------------- 50 Query: 93 SVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTL 152 + P ++++ + K+L L L L + T + + L Sbjct: 51 --QQWAPAPTVPAGTDLLVLPLSKSLDRLRFLLNWLAGEIAEPTELWLIGPTKGGIRGAL 108 Query: 153 ELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTG 212 + E + T + + +L + +P + LE D ++ VFS Sbjct: 109 KYLEAHVDGTMLEDSARHCKLYSGLL-QPGEKQSLNAWGTVLEVADQEAVSYPGVFSHGR 167 Query: 213 LDIGARFFMQHLP---ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSR 269 LD G+ +Q + G+++D+GCG GVI + L +V VD S AV +S Sbjct: 168 LDEGSALLLQAMEGHNLGKPGKVIDMGCGAGVISVWLARH--GWQVQGVDVSASAVTAST 225 Query: 270 LNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRC 329 ++ N + M + S ++ R + V+ NPPFH + T ++ + A Sbjct: 226 ESLARNGLQG----RIMGGDLFSPIQ-GRVDMVVTNPPFHDRRQRTTDITRRLIAEAPTY 280 Query: 330 LKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAV 372 LK G L++VANR L Y L F + + +F V +AV Sbjct: 281 LKPGGVLWLVANRELPYVQWLDDAFSHVQVASETTRFRVYRAV 323 >UniRef50_A1U204 Ribosomal RNA small subunit methyltransferase C n=3 Tax=Marinobacter RepID=RSMC_MARAV Length = 351 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 74/352 (21%), Positives = 129/352 (36%), Gaps = 24/352 (6%) Query: 33 EYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDES 92 E LL+ R +L ++DA +L P ++E A + + D + Sbjct: 9 EVLLRNAHLLNGRPALLGVSDA------SLLPRCPVPGI--AMTEHAGLWQILSHDTDWA 60 Query: 93 SVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTL 152 + V++ +PK A E +L R + ++ + ++ + Sbjct: 61 GCFGYEPDRQQQGSCDTVVVFLPKARAECELRLALARYLGKPGAALVVIGEKKEGIAGAI 120 Query: 153 ELFEKVLGPTTTTLAWKKARLINCTFNEP----QLADAPQTVSWKLEGTDWTIHNHANVF 208 + F V G + + ++ +P +L D G ++ VF Sbjct: 121 KQFSVVAGEVVKVDSARHCQVWCGRNTQPLTEFRLTDWLSWTELSCAGVALSVAGLPGVF 180 Query: 209 SRTGLDIGARFFMQHLPENLEG--EIVDLGCGNGVIGLTL-----LDKNPQAKVVFVDES 261 S LD G R ++ L E+ G + D CG GVIG L L +V D Sbjct: 181 SLGRLDDGTRMLLETLAESPLGVDRVFDFACGAGVIGSWLHGFHQLAGKMPIRVDGTDVQ 240 Query: 262 PMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWE 321 AV +R + E + L+ V+ + AV+ NPPFH ++ + Sbjct: 241 AQAVFCARESYRKAGVNG----EIFAADGLAVVQ-GNWPAVISNPPFHTGVKTDTSMTEQ 295 Query: 322 MFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 L GEL +VAN L Y +++ G +A + +F V +A + Sbjct: 296 FLAQVAAHLAHGGELRLVANSFLPYEALIRQHIGPVEKLAQDRRFTVYRAFR 347 >UniRef50_Q5R049 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Idiomarina loihiensis RepID=RSMC_IDILO Length = 334 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 74/343 (21%), Positives = 133/343 (38%), Gaps = 24/343 (6%) Query: 35 LLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSV 94 L +Q G +L+++ G LS AL +S + + I ++ Sbjct: 9 LGRQSAQPWANGSLLVIHPGGGELS-ALPNASAWSFHAGHAAYWKAAGRPVFCQIQPPNL 67 Query: 95 KFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLEL 154 VL V K L + L L + + T + + R ++ Sbjct: 68 ----------SHYDGVLFLVAKEKELNQYLLEQLAS-LPTGTPVWFAGEKRSGIQPLMKH 116 Query: 155 FEKVLGPTTTTLAWKKARLINCTFNE-----PQLADAPQTVSWKLEGTDWTIHNHANVFS 209 L P + L NE + D + ++++L + VFS Sbjct: 117 LPAWLQPPQKLASANHCLLFASERNEQVHQSASIEDYAKNITYELNQQQESFVTLPGVFS 176 Query: 210 RTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSR 269 R +D +QH+ + +G +D CG GVI L +++ D SP+A+A+S Sbjct: 177 REHIDPATLLLLQHIKDLPKGRGMDFACGAGVIAKQLASVA--TELMACDVSPIAIAASE 234 Query: 270 LNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRC 329 + + + E + + + +F+ ++ NPPFH +A E +AR+ Sbjct: 235 ITLANEPVK----TELRLADGI-PDNAGQFDFIVSNPPFHTGQRTDYEIAREFISNARQH 289 Query: 330 LKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAV 372 L G +VANR L + ++ +FGNC+ IA + ++ V A Sbjct: 290 LNKQGVFRVVANRFLPWPEVIESVFGNCSVIADDGRYRVYHAT 332 >UniRef50_C1ZEP1 16S RNA G1207 methylase RsmC n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZEP1_PLALI Length = 390 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 82/356 (23%), Positives = 148/356 (41%), Gaps = 22/356 (6%) Query: 31 ADEYLLQQLDDTEIRGPVLILNDAFGA-LSCALAEHKPYSIGDSYISELATRENLRLNGI 89 A++ ++ L D ++G ++ N + A + ALA KP S + ++ R+ L Sbjct: 23 AEQLMVDALAD--VQGERILCNSSGRAQFAFALAIAKPQSQVTCWFLDVHLRDQAALAPA 80 Query: 90 DESSVKFLDSTADYPQ-QPGVVLIKVPKT-LALLEQ-QLRALRKVVTSDTRIIAGAKARD 146 + L D+P + + + +PKT A L + L+ + +IA RD Sbjct: 81 GVPANLQLVCEPDFPGIEYQTICLVLPKTGEAELTRDLLQQACVRLVEGGTLIATTDMRD 140 Query: 147 ---IHTSTLELFEKV-LGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIH 202 +HT F KV PT + + L T + +L + ++ + Sbjct: 141 DQWLHTEIQRFFPKVTRRPTRKGVTY----LAIKTESPKKLKNHDCEFMFRDGERLIRMK 196 Query: 203 NHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESP 262 + VF+ LD+GAR + + +G+IVDLGCG+G + + ++P+ V+ VD +P Sbjct: 197 SRPGVFAHRKLDVGARTLISVIEPMEQGQIVDLGCGSGGVAVAAALRHPELDVLAVDSNP 256 Query: 263 MAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 322 A+ ++ + N R + ++ +E + V NPP+ +A Sbjct: 257 RAIECTQWAAKEN---GTSRVQTRLDATGKSLESNSVDVVYANPPYFS----NYKIAGIF 309 Query: 323 FHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR 378 A R L G +YIV Y L +F N T+ + ++KA K + Sbjct: 310 IETAFRILIPGGRIYIVTKAPAWYVESLPLLFENVTSDLI-RGYSIVKATKSMSGK 364 >UniRef50_A4BC00 16S RNA G1207 methylase RsmC n=1 Tax=Reinekea blandensis MED297 RepID=A4BC00_9GAMM Length = 319 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 69/306 (22%), Positives = 118/306 (38%), Gaps = 11/306 (3%) Query: 67 PYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLR 126 P S D+ + + R+ ++ + S + + ++ PK L L Sbjct: 19 PVSWFDTPLPSNLIDSDDRVFNLNWAPDNQFSSESTGLATSPLNVLHYPKAKDRLAWWLD 78 Query: 127 ALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFN--EPQLA 184 L+K + R+ + S + T + + L T N +P Sbjct: 79 RLQKTLQPGQRLWIVGENNGGIKSLPKRLPHW--EVTKLDSARHCSLFEVTNNTDQPSAE 136 Query: 185 DAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGL 244 + T SW+ D T + VFS LD G + LPE GE+++ G G+G++ Sbjct: 137 EQWTTFSWQ----DLTGYALPGVFSAGRLDKGTEVLLSTLPE-FHGELLEFGAGSGILTS 191 Query: 245 TLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLC 304 L + +V V+ +AV S+ V+ N ++ ++ L + R++A++ Sbjct: 192 ALAKQPSVRRVDAVEIDLLAVRSANRTVQENQL--TNKAFIHWSDGLESLPAQRYDALVS 249 Query: 305 NPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNN 364 NPPFHQ ++F A LK G+ V N L+Y L F T+ Sbjct: 250 NPPFHQGLRTAYAATEKLFAQAHLWLKPGGQFIWVINDFLNYQMHLDSAFSAPETLVRER 309 Query: 365 KFVVLK 370 F V K Sbjct: 310 GFKVQK 315 >UniRef50_B6AVZ4 Methyltransferase small n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AVZ4_9RHOB Length = 331 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 78/339 (23%), Positives = 138/339 (40%), Gaps = 17/339 (5%) Query: 41 DTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDST 100 D R +L + D A+ +A + + SY+ + +N +S+ + Sbjct: 7 DLARRAELLPVLDGTIAVFGPIALERVSGLNTSYL--RCVSDMFTVNEALKSAGISVTRA 64 Query: 101 ADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLG 160 D +VL+ P++ + + QL + + II + D S + +++ Sbjct: 65 LDEACAHALVLL--PRSKSEI-WQLISAAIAAAPEGWIIVDGQKTDGIESVAKQITRLVS 121 Query: 161 PTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFF 220 + + + + Q P K +G VFS +D + Sbjct: 122 GVE-SYSKGHGKTLWFKGGNAQDLLQPIVTEEKNKGGYL---TSPGVFSADDIDPASELL 177 Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAK-VVFVDESPMAVASSRLNVETNMPEA 279 MQH+P +L G + DLG G G + L +NP + + V+++ A+ +R NVE Sbjct: 178 MQHIPTSLSGHVADLGAGWGYLSDRALSENPSIETLHLVEDNAAALECARANVED----- 232 Query: 280 LDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 339 R EF + L+ + F+A+L NPPFH + A L+ G+L++V Sbjct: 233 -PRAEFHWADVLNWRQSKLFDAILMNPPFHTSRIAEPQIGINFVRAAASLLRPEGKLFLV 291 Query: 340 ANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR 378 AN HL Y +++ F I N+F V A + GR + Sbjct: 292 ANAHLPYETTIEQSFEKYDLIVRTNRFKVFCATR-GRAK 329 >UniRef50_Q0C459 Putative methyltransferase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C459_HYPNA Length = 346 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 68/339 (20%), Positives = 123/339 (36%), Gaps = 22/339 (6%) Query: 46 GPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQ 105 GP+L+LN G L++ + S + L+ G L + Sbjct: 24 GPILVLNAEPGG---WLSQLPKERVV-CRTSMKPAHDALKAAG-----YNVLAPDSVEIP 74 Query: 106 QPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTT 165 Q + ++ P+ I+A + ++F ++ G + Sbjct: 75 QAQLTIVVPPRQRDFARALYARALLAAPEGGVILASLPNTLGGKNAEKVFAEIAGDAG-S 133 Query: 166 LAWKKARLINC-----TFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFF 220 L K R N + D + ++ + +FS +D G+ Sbjct: 134 LTKNKCRAFWAVKRADEMNTELVEDW--IAQDTPREIEPSLWSRPGLFSWDRIDPGSELL 191 Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAK-VVFVDESPMAVASSRLNVETNMPEA 279 +PE +G +D+G GNG + +L+ + + + V+ A+ E M Sbjct: 192 ADSIPEYTKGIGIDIGAGNGFLSREVLNHCDKVERMDLVEADYRALICQ----EQTMAPF 247 Query: 280 LDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 339 RC +AL + ++ L NPPFH A + A LK +G L++V Sbjct: 248 GARCTIKWADALKDLPRATYDFALMNPPFHTGRADNSELGRAFIRAAAATLKPSGTLWLV 307 Query: 340 ANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR 378 ANRHL Y +L F + + + ++KA K R++ Sbjct: 308 ANRHLPYEGELSACFRGVEMLDDEDGYKIIKAEKPKRQK 346 >UniRef50_P57413 Ribosomal RNA small subunit methyltransferase C n=5 Tax=Buchnera aphidicola RepID=RSMC_BUCAI Length = 338 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 62/275 (22%), Positives = 116/275 (42%), Gaps = 13/275 (4%) Query: 100 TADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVL 159 + + Q V++ PK + + QL + +T I S + +K + Sbjct: 71 SQEMIQNCDVIIYYWPKDKSEAKFQLMNIISCSPINTEIFIVGNNSSGVKSAPLMLKKWI 130 Query: 160 GPTTTTLAWKKARLINCTFNEPQ---LADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIG 216 + K + LI+ + L D +T WK + I + VF +D G Sbjct: 131 -ELEKIDSAKHSILISGLIKKKAIFVLEDFFKTHLWK----NLIIKSLPGVFGHKKIDSG 185 Query: 217 ARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM 276 ++ + G+++D+GCG G + +LL +P A + VD + A+ S+ + +N Sbjct: 186 SKLLASTFSNRITGKVLDIGCGTGFLSASLLYFSPDAILTLVDNNMYALKCSQYTLNSNK 245 Query: 277 PEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGEL 336 + + +N S V +F+ ++ NPPFH + N+ +M A++ L GEL Sbjct: 246 FNG----KIVYSNLYSNVF-KKFDLIISNPPFHNDLQINFNIIEKMICGAKKYLTKTGEL 300 Query: 337 YIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 V +R ++ L K F I +++ V +A Sbjct: 301 RFVTSRFINCHFLLNKFFQKYYVIKETSQYKVYQA 335 >UniRef50_A0NLD9 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NLD9_9RHOB Length = 352 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 117/300 (39%), Gaps = 17/300 (5%) Query: 81 RENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIA 140 R+ L+ G+ + VL+ + QL +IA Sbjct: 55 RDALQKAGLKVDA-------ETEADGFDAVLVLPGRQRQEARAQLARAVSKTRPGGIVIA 107 Query: 141 GAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADA----PQTVSWKLEG 196 A + + + +LG + K R++ ++ L + T+ Sbjct: 108 CAPNTEGAKTLESDLQDLLGSAEK-MTKNKCRVVWSDVSDDSLNTSLLAEWLTLDAPRPV 166 Query: 197 TDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAK-V 255 D + VF+ +D +R LP L+G DLG G G + + +K P+ + Sbjct: 167 LDGAFVSRPGVFAWDRIDPASRLLADQLPATLKGRGADLGAGFGYLTRAVFEKAPKVTSM 226 Query: 256 VFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ-QHAL 314 + A+ + N+ + L + ++ G+E ++ V+ NPPFHQ A Sbjct: 227 DLFEAEKRALDLAEQNLAA--FKGLRTMNGIWSDVTQGIE-GPYDFVVSNPPFHQAGKAD 283 Query: 315 TDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKL 374 +V A R L+ GE ++VANRHL Y H L ++F + +A + V++AVK Sbjct: 284 RADVGQGFIRSAARGLRPGGEFFMVANRHLPYEHTLGEVFADVKQLADEGGYKVIRAVKR 343 >UniRef50_UPI000051043F putative methyltransferase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000051043F Length = 406 Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 81/351 (23%), Positives = 141/351 (40%), Gaps = 35/351 (9%) Query: 42 TEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENL--RLNGIDESSVKFLDS 99 E+ +LI++DA G S L+E P + I E T + R + ID+ + D Sbjct: 68 AELPHEILIVDDAQGLQSRLLSEIAPVRTYNDRIDEAHTLAEVADRTSPIDDLAAFASDR 127 Query: 100 TADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVL 159 + ++ PK L + + A++ V+ +I ++ + + + + Sbjct: 128 NEVW------AIVNAPKATHALAETIAAIQSDVS---TVIVIGRSDSMSRAVNKELARGY 178 Query: 160 GPTTTTLAWKKARLINCT--FNEPQLADAPQ--TVSWKLEGTDWTIHNHANVFSRTGLDI 215 + K R+I + + P L P+ T+ G + H FS D Sbjct: 179 ARVDVSPGVGKHRMIIGSRRLSSPSLPSYPRRGTIDHPATGV-LQVRAHGACFSGIKSDE 237 Query: 216 GARFFMQHL-----------PENLEGE---IVDLGCGNGVIGLTLLDKNPQAKVVFVDES 261 G+ + L E + G I+DLGCGNG + + VD S Sbjct: 238 GSTALLTALSSETKPAESQPAEAVTGSPNSILDLGCGNGWLLTAAMQVTAAKNGTGVDVS 297 Query: 262 PMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNVAW 320 AV S+R E N E + ++ +A + +L NPPFHQ + + A Sbjct: 298 KAAVTSARETAEANGLE----VDTILADATDVQALSGGHDLILLNPPFHQGTTIETDTAA 353 Query: 321 EMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 + A + L G+++ V N HLDY L+++ G +A +KF V+++ Sbjct: 354 GLMATASKLLAPGGQVFTVYNSHLDYRATLERVIGPSEQLARTSKFTVIRS 404 >UniRef50_A9B5U4 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5U4_HERA2 Length = 365 Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 73/329 (22%), Positives = 138/329 (41%), Gaps = 8/329 (2%) Query: 49 LILNDAFGALSCALAEHKPYSI--GDSYISELATRENLRLNGIDESSVKFLDSTADYPQQ 106 L++ G + ALA + DS ++ A R++ + D T P Sbjct: 39 LVIGAGTGRIGLALARAGAHVSFADDSIVALAAARQSFAQAKLPAQFFSTTDLTPSKPFD 98 Query: 107 PGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTL 166 ++ I + + + + + G + + L E+++GP+ TL Sbjct: 99 LVLINILWWSDNQRGAELINLAAQHTNAGGIVAIGGGKQAGLSGATTLLEQIVGPSVKTL 158 Query: 167 AWKKARLINCTFNEPQLADAPQTVSWKLEGTD--WTIHNHANVFSRTGLDIGARFFMQHL 224 K ++ A QT +L D TI A VF++ LD + + + Sbjct: 159 YKKGHHVVMAFRPLHWQAQPSQTTQHQLSHGDHALTIEATAGVFAQGQLDPASAMLLDAV 218 Query: 225 PENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCE 284 ++DLGCG G++G+ L + + ++D + +A+ +++ N++TN Sbjct: 219 HIQANQRVLDLGCGAGILGMFLQQRESTLALTYIDSTMVAIEATKRNLQTNQLTG----R 274 Query: 285 FMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL 344 + ++ + V +F+ V+ NPPFH + +A + A + L NG+L IVANR L Sbjct: 275 VLASDGIQAVNGEQFDLVVSNPPFHVGRVQSPQLAENLLKQAVQVLAPNGQLVIVANRFL 334 Query: 345 DYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 Y L+ + N +A + ++ VL K Sbjct: 335 RYEPLLETVLSNVHELAGDQRYKVLVGTK 363 >UniRef50_C5QUQ6 16S rRNA methyltransferase n=3 Tax=Staphylococcus epidermidis RepID=C5QUQ6_STAEP Length = 244 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 14/202 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL----PENLEGEIVD 234 +P + P+ +S++++ + A VFS+ +D G+ ++ P I D Sbjct: 49 EQPDVKSNPKRISYQIKNAQLELTTDAGVFSKDNVDFGSDLLIKTFLKEHPPGPSKTIAD 108 Query: 235 LGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV 294 +GCG G IGL + +P ++ +D + A+A + +N N +D + ++ LS V Sbjct: 109 VGCGYGPIGLAIGKVSPHHQITMLDINNRALALAEMNKTKNQ---VDNVTIIESDCLSAV 165 Query: 295 EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF---HKLK 351 F+ +L NPP ++ +F A LK GELY+V + K++ Sbjct: 166 NHQCFDYILTNPPIRAGK----DIVHRIFEQAFDRLKTTGELYVVIQKKQGMPSAKKKIE 221 Query: 352 KIFGNCTTIATNNKFVVLKAVK 373 ++FGN IA + + +LK++K Sbjct: 222 ELFGNVEIIAKSKGYYILKSIK 243 >UniRef50_C6XLQ7 Methyltransferase small n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XLQ7_HIRBI Length = 308 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 66/287 (22%), Positives = 113/287 (39%), Gaps = 17/287 (5%) Query: 95 KFLDSTADYPQQPGVVL----IKVPKTLALLEQQLRALRKVVTSDTRI-IAGAKARDIHT 149 + +AD + P L I P L + + I + K + Sbjct: 31 PLIPESADIAESPDAALDYFAIAAPAGTQERRFVLAHALRALKPSGEISVIAGKKKGGQR 90 Query: 150 STLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTD--WTIHNHANV 207 +L ++LG T + KK + I L+ + + D + + + Sbjct: 91 LKADL--ELLGCTHIRIDSKKHQKIASCAPPADLSQVHKAIEENGPQLDEELGLWSQPGI 148 Query: 208 FSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVAS 267 FS D G+ M+HLPE L G DLGCG G++ +L ++ +D A+ Sbjct: 149 FSWNRPDPGSLLLMEHLPE-LSGRGADLGCGLGLLSHHVLQSEAVKSLLLIDIDRRAIEM 207 Query: 268 SRLNVETNMPEALDRCEFMINNALSGVEPFRF-NAVLCNPPFHQQHALTDNVAWEMFHHA 326 + NV +R F+ +A G + + ++ NPPFH + A Sbjct: 208 AHRNVSD------ERISFLWQDARKGPKDITDLDFIVMNPPFHDAGEEDHGLGKAFMARA 261 Query: 327 RRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 L+ G ++VANRHL Y + + F + T A ++ F V++A+K Sbjct: 262 SSMLRKGGICWLVANRHLPYERAINEHFKSFTPKADSHGFKVIEAIK 308 >UniRef50_C0XSD5 Possible methyltransferase small n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XSD5_9CORY Length = 318 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 78/339 (23%), Positives = 134/339 (39%), Gaps = 31/339 (9%) Query: 35 LLQQLDDTEIRGPVLILNDAFG-ALSCALAEHKPYSIGDS-YISELATRENLRLNGIDES 92 L+ ++I ND G L+ A+ K DS ++ A + G + Sbjct: 7 LIWSTAPVAEAETIMICNDPTGDLLTAAVDTGKRVVCVDSDFVRCRAAGD----AGALVA 62 Query: 93 SVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTL 152 + LD+ V + ++PK+L L+ R++ ++ GA + + S Sbjct: 63 GDRRLDAYLAGSSGSAVAVGEMPKSLGRLDYLARSIAGAGFDQVTMVLGANNKHLARSMN 122 Query: 153 ELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTG 212 + + +L K R + +A P+ V++ + + VFS T Sbjct: 123 TVLGESFTDVAASLGRGKFRCL--------VASGPKPVTYT-PASSRELVAIGGVFSGTK 173 Query: 213 LDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNV 272 D+G LP +L G +DLGCGNG + L Q V+ D AV S+R Sbjct: 174 PDLGGELLRASLPASL-GRYLDLGCGNGSVSRGL-----QGAVMATDSDADAVLSARA-- 225 Query: 273 ETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKI 332 ++A S + F+ + NPPFH + + + A R L Sbjct: 226 --------IGLHVTWDDAGSALADSSFDTIALNPPFHDGTTVDATLVQHLLDAAARLLAP 277 Query: 333 NGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 G LY+V N HL Y ++++ F +A + ++ VL+A Sbjct: 278 GGSLYLVHNSHLRYRAEVERRFDAVEEVARDARYTVLRA 316 >UniRef50_Q3BNY2 Ribosomal RNA small subunit methyltransferase C n=16 Tax=Proteobacteria RepID=Q3BNY2_XANC5 Length = 392 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 81/387 (20%), Positives = 133/387 (34%), Gaps = 28/387 (7%) Query: 2 SHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEI--RGPVLILNDAFGALS 59 L R L+R A PLQA L GPVL L G Sbjct: 23 PPLPYNGRPFPLRRPMAGPHDAPLQA------LFLPFAQGALPWPEGPVLFLRARDG--- 73 Query: 60 CALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLA 119 L E S E L NG +V+ + +VL+ P+ Sbjct: 74 FPLREQASPQTLTCEQSFRPFAEALERNGW---NVREESEIEADSTRYALVLVLPPRQRE 130 Query: 120 LLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTF- 178 + R++A + S ++ G +L R Sbjct: 131 EARALFARAVALTAPGGRVVACQSNNEGARSGEADLRQLTGLAG-SLTKYHCRTYWSAPL 189 Query: 179 ---NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDL 235 + L + + D + VF+ +D + ++HLP L G DL Sbjct: 190 PADTDAALQARWAALDAPRKILDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADL 249 Query: 236 GCGNGVIGLTLLDKNPQAKVVFVD---ESPMAVASSRLNVETNMPEALDRCEFMINNALS 292 G G G + +L + P KV +D A+ +R N++ + + + + Sbjct: 250 GAGFGYLSAEVLARCP--KVTALDLYEAEARALTLARRNLQD--IAHPAQLHYHWRDVTA 305 Query: 293 GVEPFRFNAVLCNPPFHQ-QHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLK 351 G+ +++ ++ NPPFH A ++ A + L+ G+L +VANRHL Y L Sbjct: 306 GLV-AQYDFIVSNPPFHTPSRADRPDIGQRFIAVAAQALRPGGQLILVANRHLPYEQVLN 364 Query: 352 KIFGNCTTIATNNKFVVLKAVKLGRRR 378 FG A + F ++ A++ R Sbjct: 365 DSFGQVRVAAERDGFKLIAAIRGRGAR 391 >UniRef50_Q67JT6 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67JT6_SYMTH Length = 206 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 10/203 (4%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCG 238 P +A A + S L G D+ A VFSR +D G+ ++ + ++DLGCG Sbjct: 8 RRPGVAHAETSFSVTLRGMDFRFVTDAGVFSRERVDFGSLLLIEAMEIGPADTVLDLGCG 67 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 G IG+ PQ + V+ + A +R N+E N A+ E + + L V Sbjct: 68 YGPIGIVAARLAPQGFIYMVEINERAAELARRNLEAN---AIANAEVRVGDGLEPVAGIA 124 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL---DYFHKLKKIFG 355 F+AV+ NPP A + + A LK G L++V KL+ +FG Sbjct: 125 FDAVVTNPPIRAGKAT----VYRLLDEAHAALKPGGSLWVVVQNKQGAPSMKRKLEALFG 180 Query: 356 NCTTIATNNKFVVLKAVKLGRRR 378 N +A + VL+A + + + Sbjct: 181 NVEDVARQAGYRVLRARREDKPK 203 >UniRef50_A2BME9 Predicted Methyltransferase n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BME9_HYPBU Length = 198 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 8/204 (3%) Query: 174 INCTFNEPQLADAPQT-VSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEI 232 + + P+ P+ VS L G + VFS +D G R ++H EG + Sbjct: 1 MAAHYYRPRSRKGPRMLVSDYLRGVTVEFYVSTEVFSPREVDEGTRLLIEHAIVPEEGTV 60 Query: 233 VDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 292 +D+GCG G IG+TL +P+ VV VD +P AV +RLN N E +R E + + Sbjct: 61 LDMGCGYGAIGITLAKAHPRLHVVMVDVNPKAVELARLNARHNGVE--NRVEVLQGDLYE 118 Query: 293 GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLD-YFHKLK 351 V+ + F+A++ NPP + ++ A LK G L IV + + ++ Sbjct: 119 PVKGYHFDAIISNPPLAAGMK----IIEKLILEAPAHLKPGGSLQIVMRKGAEKAKELMQ 174 Query: 352 KIFGNCTTIATNNKFVVLKAVKLG 375 K FGN + + +L A K Sbjct: 175 KAFGNAKVLLRKKGYTILYAEKPS 198 >UniRef50_A8LQD1 Ribosomal RNA small subunit methyltransferase C n=2 Tax=Rhodobacteraceae RepID=A8LQD1_DINSH Length = 333 Score = 197 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 70/275 (25%), Positives = 106/275 (38%), Gaps = 10/275 (3%) Query: 101 ADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLG 160 L+ VP+ L V I+ + D S ++L K L Sbjct: 61 PQAEGAFATALVCVPRAKDHARALLAEAIGRVGPGGLIVLDGQKTDGVDSLVKL-AKSLL 119 Query: 161 PTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFF 220 A +L+ +P AP T L + + A FS +D G+ Sbjct: 120 TGVEVYAKAHGKLLWGRVPDPLPDLAPLTP--PLTSPEGWVTARAG-FSAGAVDAGSALL 176 Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEAL 280 HLP L+G+++DLG G G + L + V+ A+ ++R NV+ Sbjct: 177 AAHLPARLQGDVLDLGAGWGYLAKAALASGQVTGMDLVEAEFDALEAARRNVDD------ 230 Query: 281 DRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 340 R F+ +A R++A+LCNPPFH + A R LK +G L +VA Sbjct: 231 PRARFLWEDAAVFAPGKRYDAILCNPPFHTSRKADPAIGQMFLRTAARLLKPSGVLGLVA 290 Query: 341 NRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLG 375 NRHL Y H L + FG + + + A K Sbjct: 291 NRHLPYEHTLAECFGEAQPVTEAQGYKIFHARKPR 325 >UniRef50_A5IQ95 16S rRNA m(2)G 1207 methyltransferase n=53 Tax=Staphylococcus RepID=A5IQ95_STAA9 Length = 202 Score = 197 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 14/202 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL----PENLEGEIVD 234 +P + Q + ++L + VFS+ +D G+ +Q P I D Sbjct: 7 EDPSVISNEQRIQYQLNHHKIDLITDNGVFSKDKVDYGSDVLVQTFLKAHPPGPSKRIAD 66 Query: 235 LGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV 294 +GCG G IGL + +P + +D + A+A N + N +D ++ALS V Sbjct: 67 VGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVEKNKKLN---GIDNVIVKESDALSAV 123 Query: 295 EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF---HKLK 351 E F+ +L NPP +F A L NGEL++V + ++ Sbjct: 124 EDKSFDFILTNPPIRAGKET----VHRIFEQALHRLDSNGELFVVIQKKQGMPSAKKRMN 179 Query: 352 KIFGNCTTIATNNKFVVLKAVK 373 ++FGN + + + +L+++K Sbjct: 180 ELFGNVEVVNKDKGYYILRSIK 201 >UniRef50_A8R9R0 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R9R0_9FIRM Length = 198 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 50/200 (25%), Positives = 97/200 (48%), Gaps = 13/200 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL--PENLEGEIVDLG 236 + L + + ++++ D++ VFS+ +D G + ++ + E L ++DLG Sbjct: 7 DNRHLKENRKEITFRFWCFDYSFITDNGVFSKEAIDYGTQVLLKTICEREELGERVLDLG 66 Query: 237 CGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 296 CG G +G+ L P +D +P AV ++ N+ N EA + ++N + Sbjct: 67 CGYGPVGVVLKKIYPTKAFEMIDVNPRAVQLAKENICRNQLEA----DVHVSNIYEDLHQ 122 Query: 297 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF---HKLKKI 353 ++ ++ NPP A V + MF A + L++ G+L++V + K+K + Sbjct: 123 ESYSDIITNPPIRAGKA----VIYTMFEEAYQHLELGGKLWVVIRKQQGAPSAVKKIKDV 178 Query: 354 FGNCTTIATNNKFVVLKAVK 373 FGNC I ++ + +LKA+K Sbjct: 179 FGNCEIIKRDSGYYILKAIK 198 >UniRef50_A0LDZ4 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDZ4_MAGSM Length = 356 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 61/285 (21%), Positives = 114/285 (40%), Gaps = 18/285 (6%) Query: 101 ADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLG 160 + +L+++P+ + + + + ++ S ++ K Sbjct: 77 PSGEEPASHILMELPQGKEAAKLAIEEALASLPPEGKLWLFGDK----ESGIQPLPKYWS 132 Query: 161 PTTTTLAWKKARLINCTFNEPQLADAPQTVS-----------WKLEGTDWTIHNHANVFS 209 T L +L+ + + + D T+ +FS Sbjct: 133 NGHTILNKGHLKLVQLNKTSQWQDQPSKKKPILPTRVEGEPFYHYQNGDVTLATLPGLFS 192 Query: 210 RTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSR 269 D + +Q L ++D GCG G+IG TL +P +V D+ A S Sbjct: 193 WAEPDAASLMLLQALQHQRMYHLLDWGCGCGLIGTTLAKHHPTLQVTLSDDMVRATRCST 252 Query: 270 LNVETNMPEALDRCEFMINNAL-SGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARR 328 +V N +A RC+ ++ + + + F+ ++ NPPFH+ +L VA E A + Sbjct: 253 ESVRLNQLQA--RCQVILEDGIGPHLRNQGFDTIVTNPPFHRGQSLNREVALEFIGDAVK 310 Query: 329 CLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 L+ G L++VAN LDY L+ F T+ +++F+V KA+K Sbjct: 311 ILERGGALWLVANSFLDYGPILQASFKKVETVLRDSRFIVWKAIK 355 >UniRef50_B9Y2U0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2U0_9FIRM Length = 203 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 13/201 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEG-EIVDLGC 237 + QL + +S++ G + VF ++ +D G+ ++ + E G I+DLGC Sbjct: 12 DNRQLPQNRKEISFRFSGFIIPLITDNGVFCKSEVDFGSYVLLKTIKEEPLGDHILDLGC 71 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G GVIG+T+ P A+++ VD +P AV + LN + N EA R + N + Sbjct: 72 GYGVIGVTVKKMFPDAEMLMVDVNPRAVELAVLNAQKNSVEAEVRVSDIFGNVTETLSD- 130 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH---LDYFHKLKKIF 354 +L NPP V + MF A L+ G LY+V + L K+++IF Sbjct: 131 ----ILTNPPIRAGKK----VIYAMFEQAYDHLRPQGHLYVVIRKQQGALSAKAKIEEIF 182 Query: 355 GNCTTIATNNKFVVLKAVKLG 375 GNC I + +LK+ K Sbjct: 183 GNCEVINKEKGYYILKSTKTD 203 >UniRef50_A3V764 Methyltransferase, putative n=3 Tax=Rhodobacterales RepID=A3V764_9RHOB Length = 323 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 96/239 (40%), Gaps = 11/239 (4%) Query: 138 IIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGT 197 ++ + D S + K LG ++ RL AD T + Sbjct: 96 VVVDGQRTDGVDSLFKACRKRLGDI-ASITKGHGRLFWFPATTA-FADWAATGPVQGPHG 153 Query: 198 DWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVF 257 A VFS +D G+ Q LP L + DLG G G + +L ++ A + Sbjct: 154 ---FFTAAGVFSDGAVDAGSALLAQALPPKLPARMADLGAGWGYLAQAVLARDSVASLDL 210 Query: 258 VDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDN 317 ++ +++ +RLNV R F +AL ++ ++ NPPFH A Sbjct: 211 IEAEALSLQCARLNVTD------PRARFHWADALRFTPDKAYDGIVMNPPFHVGRAADAG 264 Query: 318 VAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGR 376 + A R L +G+L++VANRHL Y + + F N I NN F + A K R Sbjct: 265 LGRAFIQAASRLLAPHGKLWMVANRHLPYEQAMSENFRNVDIIGGNNAFKLFHATKPTR 323 >UniRef50_A4WPY7 16S rRNA m(2)G 1207 methyltransferase n=5 Tax=Rhodobacteraceae RepID=A4WPY7_RHOS5 Length = 333 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 61/248 (24%), Positives = 101/248 (40%), Gaps = 13/248 (5%) Query: 129 RKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQ 188 V ++ G K I +L E++ T + A K + EP L D Sbjct: 93 AAVEPGGLIVVDGQKTDGIEAVWRDLAERLAVSATLSKAHGK---LFTLAAEPGLEDW-- 147 Query: 189 TVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLD 248 + + +FS D G++ ++ LP +L G +VDLG G G + +L Sbjct: 148 --AARPAEIVGGFRTLPGIFSADAPDRGSQLLLEALPADLSGRVVDLGAGWGFLARAVLG 205 Query: 249 KNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPF 308 + ++ V+ A+ +RLN+ +R F +A + V+CNPPF Sbjct: 206 RRAVKRIDLVEAEHAALDCARLNITD------ERAHFHWADATRFRLSKPADVVVCNPPF 259 Query: 309 HQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVV 368 H + A R L +G L++VANRHL Y L+ +F I + F + Sbjct: 260 HTTREADPTLGMGFLQAAARLLAPSGLLWLVANRHLPYDRGLRALFREVEEIGGDAAFRI 319 Query: 369 LKAVKLGR 376 ++A + R Sbjct: 320 VRAARPQR 327 >UniRef50_A3DJK4 Methyltransferase small n=3 Tax=Clostridium thermocellum RepID=A3DJK4_CLOTH Length = 196 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 12/198 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCG 238 P T+S+ ++ + A VFS+ +D G+ ++ +P L+G I+D+GCG Sbjct: 7 QNPDTPHDVSTISYTVKDRVIKFNTDAGVFSKRRVDFGSDLLIRSVP-PLDGSILDIGCG 65 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 GVIG++L NP + V +D + AV + N+ N + + ++ S V + Sbjct: 66 YGVIGISLALLNPSSFVTMIDINERAVDLASQNIHLN---GVTNATALTSDGFSNVSD-K 121 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK---LKKIFG 355 F+A++ NPP V + +F + L G +Y+V + LK ++G Sbjct: 122 FDAIVSNPPIRAGKK----VIYPIFADSINHLNPGGSIYLVIQKKQGANSAIEFLKSVYG 177 Query: 356 NCTTIATNNKFVVLKAVK 373 NC I + ++K+ K Sbjct: 178 NCEVINKKAGYWIMKSTK 195 >UniRef50_P37872 Uncharacterized protein ybxB n=163 Tax=cellular organisms RepID=YBXB_BACSU Length = 201 Score = 190 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 12/201 (5%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPEN-LEGEIVDLGC 237 +P + QT S++L D+T + + VFS+ +D G+R + E +EG I+D+GC Sbjct: 8 EKPSVKSNKQTWSFRLRNKDFTFTSDSGVFSKKEVDFGSRLLIDSFEEPEVEGGILDVGC 67 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G G IGL+L + +D + AV S N E N + + ++ S V+ Sbjct: 68 GYGPIGLSLASDFKDRTIHMIDVNERAVELSNENAEQN---GITNVKIYQSDLFSNVDSA 124 Query: 298 R-FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF---HKLKKI 353 + F ++L NPP V +F + LK +GEL+IV + KL+++ Sbjct: 125 QTFASILTNPPIRAGKK----VVHAIFEKSAEHLKASGELWIVIQKKQGAPSAIEKLEEL 180 Query: 354 FGNCTTIATNNKFVVLKAVKL 374 F + + + ++KA K+ Sbjct: 181 FDEVSVVQKKKGYYIIKAKKV 201 >UniRef50_Q11BC2 Methyltransferase small n=2 Tax=Phyllobacteriaceae RepID=Q11BC2_MESSB Length = 336 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 63/278 (22%), Positives = 107/278 (38%), Gaps = 3/278 (1%) Query: 96 FLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELF 155 F S L+ + + E +L + V I+A +D S + Sbjct: 62 FAVSAEVKRNGYDAALLLLGRNRRENEARLAEALRSVHPGGIILAAGMKKDGAQSLRKQV 121 Query: 156 EKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDI 215 + L P ++ E AD +S T FS D Sbjct: 122 AERL-PLENAISKFHGLAFWLRRPERLEADVLSVLSGPAGITPEGYETAVGGFSEGLADP 180 Query: 216 GARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN 275 G+RF + +LP ++ G++ D G G + L L+++ + ++ S+R N+ Sbjct: 181 GSRFLIDNLPPDISGKVADFAAGWGFLSLRLVERFSIMATDLYEAHLPSLESARRNLAEQ 240 Query: 276 MPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGE 335 P C + ++ L+ P R++ +L NPPFH+ A + M A + L G Sbjct: 241 APGV--NCRYFWHDLLNEPVPHRYDVILMNPPFHRGRAAEPEIGRGMIGAAAKALNPGGR 298 Query: 336 LYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 L++VANR L Y ++ F IA + + VL K Sbjct: 299 LFLVANRGLPYERIMENAFRQQGEIARDESYKVLWGRK 336 >UniRef50_C8NTY6 Methyltransferase small domain protein n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NTY6_9CORY Length = 324 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 76/346 (21%), Positives = 133/346 (38%), Gaps = 28/346 (8%) Query: 32 DEYLLQQLDDTEIRGPVLILNDAFGAL-SCALAEHKPYSIGDS-YISELATRENLRLNGI 89 D +L+ + D G V++ +D G L + AL P DS Y A + Sbjct: 2 DSLILE-VADLSTPGAVVVCDDPTGDLVAAALELGVPVYCVDSDYTRAHAAHAAGAVVAG 60 Query: 90 DESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHT 149 + ++ + V + ++PK+L L+ R+L R++ G + + Sbjct: 61 IDGPLRADEFLVSCAPAGAVAVGEMPKSLGRLDYLARSLASAGV--GRVVFGGNNKHLAR 118 Query: 150 STLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFS 209 S ++ + K R + +A P+ V++ VFS Sbjct: 119 SMNDVLASSFAEVAASRGRGKFRCL--------VASGPRDVAYSPVEAGG-FTAVGGVFS 169 Query: 210 RTGLDIGARFFMQHLPENLE--GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVAS 267 D G L ++ G+++D+GCGNG + LL+ A AV S Sbjct: 170 GAREDYGGALLTSTLLDSRAELGKVLDVGCGNGSVVKRLLEAGVDATATD--ADADAVLS 227 Query: 268 SRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHAR 327 +R E ++A S E F+ V NPPFH + + + + + Sbjct: 228 TRA----------LGIEATWDDAGSQWEAGTFDTVALNPPFHDRAGVDATLVQHLLDASV 277 Query: 328 RCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 R L G+L++V N HL Y +++ + +A N KF VL+ + Sbjct: 278 RLLAPGGQLFMVHNSHLRYRGEVEARLKSVEQVARNQKFTVLRGTR 323 >UniRef50_D2MPQ8 Methyltransferase small domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MPQ8_9FIRM Length = 197 Score = 187 bits (476), Expect = 5e-46, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 13/197 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL-PENLEGEIVDLGC 237 N L P + + T + VFS+ LD G+ +Q L E+L G+ +D+GC Sbjct: 9 NNEDLLSKPIEYQYTIREKTLTFQSDLGVFSKNKLDFGSHVLIQTLLQEDLSGKGLDMGC 68 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G G IG+++L ++ + ++ VD + A+ R NV N +A +++ ++ Sbjct: 69 GVGAIGISILAEHKKVEMDMVDINNRALRLCRSNVVRNGLKA----NVFLSDGFKNIQE- 123 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY---FHKLKKIF 354 ++ ++ NPP Q + + ++ LK G LYIV + F KL+++F Sbjct: 124 TYDFIVSNPPIRQGK----EFLFRFYEESKSHLKDGGCLYIVIRKQQGAASSFKKLQEVF 179 Query: 355 GNCTTIATNNKFVVLKA 371 GNCT + + + +LK+ Sbjct: 180 GNCTVLEKKSGYWILKS 196 >UniRef50_B5KCF3 Possible ribosomal RNA small subunit methyltransferase C RsmC n=2 Tax=Octadecabacter antarcticus RepID=B5KCF3_9RHOB Length = 337 Score = 187 bits (476), Expect = 5e-46, Method: Composition-based stats. Identities = 66/266 (24%), Positives = 108/266 (40%), Gaps = 19/266 (7%) Query: 111 LIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKK 170 L+ VP++ L + + I+ G K I ++ + +A Sbjct: 91 LLVVPRSKTLARAMISD--AIAAGGLVIVDGQKTDGIEGIYKDV--RKTNTIMGVVAKGH 146 Query: 171 ARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEG 230 RL F D TV+ +G A VFS T +DIG+ + HL + L+G Sbjct: 147 GRLFW--FEAGTAPDWDVTVTSP-DGY----KTVAGVFSETKIDIGSSQLVPHL-DALKG 198 Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 ++ DLG G G + +L ++ ++ +A+ + LN R + +A Sbjct: 199 DVADLGAGWGFLSREILTHEGVTRLDMIEADKVALDCAVLNTND------ARARPVWTDA 252 Query: 291 LSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKL 350 L+ ++ V+ NPPFH A ++ A R LK G L +VANRHL Y +L Sbjct: 253 LT-FSGGPYDVVVSNPPFHTIRAGDPDLGKGFIATAARILKPRGALLMVANRHLPYEAEL 311 Query: 351 KKIFGNCTTIATNNKFVVLKAVKLGR 376 F +A F + +A + R Sbjct: 312 DAKFARVEELAGTGAFKIFRATRPKR 337 >UniRef50_Q72L94 Ribosomal RNA small subunit methyltransferase C n=6 Tax=Thermaceae RepID=Q72L94_THET2 Length = 375 Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats. Identities = 68/294 (23%), Positives = 123/294 (41%), Gaps = 32/294 (10%) Query: 101 ADYPQQPGVVLIKVP--KTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKV 158 +V++ +P + A ++ L A + + R+ + FE+ Sbjct: 96 EAAAGAYDLVVLALPAGRGTAYVQASLVAAARALRMGGRLYLAGDK-------NKGFERY 148 Query: 159 LGPTTTTLAWK---------KARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFS 209 L + + L+ P L + S ++ G ++T H+ VFS Sbjct: 149 FKEARALLGYGVVVRREGPYRVALLEKEKEAPPLPSLWRAFSARILGAEYTFHHLPGVFS 208 Query: 210 RTGLDIGARFFMQHL-----PENLEGE-IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPM 263 +D + ++ L PE + G ++DLG G G + L L A+VV V++ Sbjct: 209 AGKVDPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLA 266 Query: 264 AVASSRLNVETNMPEALDRCEFMINNALSGV-EPFRFNAVLCNPPFHQQHALTDNVAWEM 322 +V S + +E N +A + + ++ + E RF+ ++ NPPFH A+ +VA Sbjct: 267 SVLSLQKGLEANALKA----QALHSDVDEALTEEARFDIIVTNPPFHVGGAVILDVAQAF 322 Query: 323 FHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGR 376 A L+ G ++V+N L Y L++ FG T+ ++ VL A K GR Sbjct: 323 VDVAAARLRPGGVFFLVSNPFLKYEPLLEEKFGAFQTLKV-AEYKVLFAEKRGR 375 >UniRef50_C7LF42 Methyltransferase n=17 Tax=Brucella RepID=C7LF42_BRUMC Length = 340 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 67/323 (20%), Positives = 108/323 (33%), Gaps = 17/323 (5%) Query: 58 LSCALAE---HKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKV 114 L+C LA +P + + L L + L + ++ L+ + Sbjct: 28 LACGLAADRLLEPEWKQALTCLQPWRPDWLALQKEGFHAEPRLATDRNFSGG----LLLL 83 Query: 115 PKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGP-TTTTLAWKKARL 173 K E L V I+ + S F K G + K Sbjct: 84 GKHRGRNEAWFAQLLARVQPGGWIVVSGDKKLGIDS----FRKWAGNIAEISDRMSKNHA 139 Query: 174 INCTFNEPQLADAPQTVSWKLEGTDWT--IHNHANVFSRTGLDIGARFFMQHLPENLEGE 231 + P D K D +FS +D G+ +H+ + + G Sbjct: 140 VVFWLRRPDDLDEAFIADLKPLAADIEGGFRTEPGMFSHGAIDKGSALLARHMEKIVFGN 199 Query: 232 IVDLGCGNGVIGLTLLDKNPQAK-VVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 + DLG G G + L + K + + A+ ++R N+E A F + Sbjct: 200 VADLGAGWGYLAAQCLKYADRIKNIDLYEADYEALEAARGNLER--LGASIPISFNWFDV 257 Query: 291 LSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKL 350 S ++ V+ NPPFH+ ++ A LK G L +VANR L Y L Sbjct: 258 TSEKIAGIYDTVIMNPPFHEGRVTDVSLGQSFIAAAASRLKPGGRLLMVANRQLPYELTL 317 Query: 351 KKIFGNCTTIATNNKFVVLKAVK 373 K +F T + F + A K Sbjct: 318 KGLFKTVTLLEEAEGFKIFDAKK 340 >UniRef50_A3JNU9 Methyltransferase, putative n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JNU9_9RHOB Length = 329 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 62/272 (22%), Positives = 104/272 (38%), Gaps = 12/272 (4%) Query: 105 QQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTT 164 + L+++ ++ + + RI+ + D S + K LG Sbjct: 69 GDLDMALVQITRSKVETKLLVAQAWDATRVGGRIVVDGQKTDGIESIYKALRK-LGIEPD 127 Query: 165 TLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL 224 TL R+ F + + KL+ D VFS LD G+ + L Sbjct: 128 TLVKSHGRIFW--FERDETRPFADWLEPKLKMPDG-FATAPGVFSAEKLDKGSLALIAAL 184 Query: 225 PENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCE 284 P L G D+G G G + L K+ ++ A+ ++R+N+ +R Sbjct: 185 P-PLAGHGADIGAGWGFLSRAALGHEKVTKLDLIEAEIAALDAARVNIID------ERAN 237 Query: 285 FMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL 344 F + ++ ++ NPPFH + ++ A R LK G+ Y VANRHL Sbjct: 238 FEWADVTK-TSGRFYDFIIANPPFHTERTANTDLGVAFLTTAARNLKPKGQFYCVANRHL 296 Query: 345 DYFHKLKKIFGNCTTIATNNKFVVLKAVKLGR 376 Y L ++F N I + F V +A + R Sbjct: 297 PYEVVLNELFRNVAEIGGTSAFKVFQAAQPRR 328 >UniRef50_Q28KG1 Methyltransferase small n=1 Tax=Jannaschia sp. CCS1 RepID=Q28KG1_JANSC Length = 336 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 101/269 (37%), Gaps = 10/269 (3%) Query: 110 VLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWK 169 L+++ K+ A + + ++ + + + ++ V + Sbjct: 70 ALVQITKSRAGTLSAIAEALGHIPPGGLLMVDGQKEEGIEAIVKQLRLVF-EVDHVFSKS 128 Query: 170 KARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLE 229 +L+ + ++ EG + FS G D G+ + +PE L+ Sbjct: 129 HGKLVWLRRPDVIPPQVVDWIAAPEEGAHGYM-TVPGGFSVEGPDRGSEILVALVPE-LK 186 Query: 230 GEIVDLGCGNGVIGLTLLDKNPQAKV-VFVDESPMAVASSRLNVETNMPEALDRCEFMIN 288 G + D G G G I +L + + ++ + +++ N++ R F Sbjct: 187 GRVADFGAGWGYIAGEILAEQEGIETFDLIEADHAMLEAAQHNIDD------PRASFHWA 240 Query: 289 NALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFH 348 + +++A++CNPPFH ++ A R L G ++VANRHL Y Sbjct: 241 DVTRFTPEAQYDAIVCNPPFHTGRRADPSLGRAFIQAASRHLTARGRFFMVANRHLPYED 300 Query: 349 KLKKIFGNCTTIATNNKFVVLKAVKLGRR 377 LK FG + + + + +A K + Sbjct: 301 TLKTCFGTGSMLGELEGYKIYEAGKPLAK 329 >UniRef50_A1B2V8 Methyltransferase small n=8 Tax=Rhodobacterales RepID=A1B2V8_PARDP Length = 344 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 104/280 (37%), Gaps = 9/280 (3%) Query: 97 LDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFE 156 LD + ++ +P+ A ++ + + + D + L+ Sbjct: 56 LDVVTEASGDFDAAVVFLPRARAEARARIADAAARLAPGASLWIDGQKTDGVDAVLKEM- 114 Query: 157 KVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIG 216 + L + ++ T E P+ + + + VFS G D Sbjct: 115 RGLAAVDEVQSRAHGKIFRVTLPEAGW--LPEGWAARDHEAAPGMVTRPGVFSADGPDPA 172 Query: 217 ARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM 276 ++ LPE L IVDLG G G + +L + V+ A+ +R N+ Sbjct: 173 SQALAAALPEKLPTRIVDLGAGWGWLSAEILRHPGVELLHLVEADAAALDCARRNIAD-- 230 Query: 277 PEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGEL 336 R F +AL P N V+ NPPFH+ A + A L G L Sbjct: 231 ----PRARFHWADALDFRLPEPVNGVIMNPPFHEGRAADPKLGAGFIRAAAGLLTGAGRL 286 Query: 337 YIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGR 376 ++VANRHL Y L++ F + + N++F +L A R Sbjct: 287 WMVANRHLPYEQALRECFAEVSELGGNSRFKILTASGARR 326 >UniRef50_Q58292 Protein MJ0882 n=11 Tax=Methanococcales RepID=Y882_METJA Length = 197 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 10/199 (5%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCG 238 +P + V L G + VFS +D G + ++++ + + +I+DLGCG Sbjct: 6 EKPTTKSDVKIVEDILRGKKLKFKTDSGVFSYGKVDKGTKILVENVVVDKDDDILDLGCG 65 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 GVIG+ L D+ D + A+ ++ N++ N + D + ++ V+ + Sbjct: 66 YGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYD-IRVVHSDLYENVKDRK 122 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK---LKKIFG 355 +N ++ NPP V + + LK NGE+++V +K +FG Sbjct: 123 YNKIITNPPIRAGK----EVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFG 178 Query: 356 NCTTIATNNKFVVLKAVKL 374 N T+ + VLK+ KL Sbjct: 179 NVETVTIKGGYRVLKSKKL 197 >UniRef50_C6ABL9 Ribosomal RNA small subunit methyltransferase C n=5 Tax=Bartonella RepID=C6ABL9_BARGA Length = 342 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 54/275 (19%), Positives = 106/275 (38%), Gaps = 19/275 (6%) Query: 107 PGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTL 166 + + K + L + V + I+ S ++ K + P T L Sbjct: 79 YDGAFLHLSKYRGFNQNCFLDLLECVKPNGWIVISGNKTAGAASMMKWI-KTIVPITNKL 137 Query: 167 AWKKARLIN-------CTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARF 219 + + +N QL P T T + +FS +D G+ Sbjct: 138 SKNHGLVFWLQVPQQIERYNIAQLRSPPLTFG--------TFQTTSGMFSHGRIDPGSAA 189 Query: 220 FMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAK-VVFVDESPMAVASSRLNVETNMPE 278 ++P+ + G+ D G G G + L+++ + + + A+ +++ +++ Sbjct: 190 LASYMPKVISGKTADFGAGWGYLSHVALERSEKLTALDLYEADYNALRAAKQHLK--SIT 247 Query: 279 ALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYI 338 A F ++ + ++ ++ NPPFH Q ++ +A +CLK +G L Sbjct: 248 APFSIHFYWHDLVHEPITNLYDTIISNPPFHTQQTTDISLGKNFIINAAKCLKPSGSLLF 307 Query: 339 VANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 VANRHL Y LK IF + F +++A + Sbjct: 308 VANRHLPYETLLKNIFRTVLIHEQAHGFKIIEARR 342 >UniRef50_Q2W4E3 16S RNA G1207 methylase RsmC n=3 Tax=Magnetospirillum RepID=Q2W4E3_MAGSA Length = 314 Score = 183 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 57/271 (21%), Positives = 106/271 (39%), Gaps = 13/271 (4%) Query: 106 QPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTT 165 G+VL+ K A L ++ ++ S E+V G + Sbjct: 46 AAGLVLLT--KHKAENRANLARAWGLLEPGGVLVCCGANALGAASHEREAERVFGLAG-S 102 Query: 166 LAWKKAR---LINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQ 222 L+ +AR ++ T + P + + A FS +D G+R + Sbjct: 103 LSKHQARTFWMVRGTDSPPADCAEWLAAAEPRPVEGCGLVARAGCFSSDHVDKGSRLLLD 162 Query: 223 HLPENLEGEIVDLGCGNGVIGLTLLDKNPQAK-VVFVDESPMAVASSRLNVETNMPEALD 281 LPE L G DLG G G + +L + P+ + + +A+ +R N+ + Sbjct: 163 CLPEGLAGRGADLGAGWGYLSAEILRRFPEVTDIDLFEAEALALEDARSNL-----GGSE 217 Query: 282 RCEFMINNALSGVEP-FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 340 + F + +G+ ++ ++ NPPFH+ + A + ++ G+ +VA Sbjct: 218 KAAFHWLDVGAGLPKCEPYDWIVSNPPFHEGRKADPAIGQGFITAAWKAIRRRGKFILVA 277 Query: 341 NRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 NR L Y +L++ F T + + F V A Sbjct: 278 NRSLPYEAELRRRFREVTLLREADGFKVYLA 308 >UniRef50_A6WWW0 Methyltransferase small n=21 Tax=Brucellaceae RepID=A6WWW0_OCHA4 Length = 340 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 90/259 (34%), Gaps = 8/259 (3%) Query: 116 KTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLIN 175 + A + L V I + S + + + + ++ A + Sbjct: 89 RNEAWFAELLAR----VEPGGWIAVSGDKKLGIDSFRK-WASNIAEISDRMSKNHAVVFW 143 Query: 176 CTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDL 235 + + D +FS +D G+ + H+ + G + DL Sbjct: 144 LRRPVDLTDEFIAALKPLATDIDDVFRTEPGMFSHGVIDKGSALLVPHMEKIFFGNVADL 203 Query: 236 GCGNGVIGLTLLDKNPQAK-VVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV 294 G G G + L + K + + A+ ++R N+E F + S Sbjct: 204 GAGWGYLAAQCLKFADRIKSIDLYEADYEALEAARGNLERLGASVP--ISFNWFDVTSEK 261 Query: 295 EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIF 354 ++ V+ NPPFH+ ++ A LK G L +VANR L Y LK +F Sbjct: 262 MAGIYDTVIMNPPFHEGRVTDVSLGQAFIAAAASRLKPGGRLLMVANRQLPYETTLKGLF 321 Query: 355 GNCTTIATNNKFVVLKAVK 373 N T + N F + A K Sbjct: 322 KNVTLLEEANGFKIFDAKK 340 >UniRef50_C5NY36 Methyltransferase small n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NY36_9BACL Length = 198 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 11/199 (5%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLE-GEIVDLGC 237 N P + ++ + + + VFS+ +D G + ++ N E ++VD+GC Sbjct: 7 NNPTTESREKIINSTIANENLKFYTDNGVFSKESVDFGTKTMLESFTTNKENAKVVDIGC 66 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G GVI + L K P K VD + + S+ N+E N E + E + +++ V Sbjct: 67 GYGVISIFLAKKYPTYKFTMVDVNNRVLELSKKNIELNKIE--NEVEVLESSSFDNVV-G 123 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY---FHKLKKIF 354 F+ VL NPP + ++ + L GEL++V + L+ F Sbjct: 124 TFDIVLTNPPIRAGKK----IVHKIMTDSYEHLNAQGELWVVIQKKQGMASCKKLLEDTF 179 Query: 355 GNCTTIATNNKFVVLKAVK 373 + N + +LKAVK Sbjct: 180 SMVEVVTKNKGYYILKAVK 198 >UniRef50_Q8TXG5 16S rRNA G1207 methylase n=1 Tax=Methanopyrus kandleri RepID=Q8TXG5_METKA Length = 199 Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 9/182 (4%) Query: 193 KLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQ 252 ++ G ++ VFS +D G + +++ ++DLGCG GV+G+ + + Sbjct: 22 RIRGREYRFLTAPGVFSWRRIDPGTQLLAENMDLEGVHSVLDLGCGYGVLGIVAAKELGE 81 Query: 253 AKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQH 312 VV D + A+ + N N E D E + VE F+ ++ NPP + Sbjct: 82 GHVVMTDVNRRAIWLANENRRLNDVE--DITEVREGSLYDPVEDEEFDRIVSNPPIREGL 139 Query: 313 ALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKK---IFGNCTTIATNNKFVVL 369 ++ + A L +GEL++V R + L + +FG+ A + VL Sbjct: 140 ----DLVLRIVREAPNHLTEDGELWLVVRRKMGSKRILSEMRTVFGSAEVAARGGGYWVL 195 Query: 370 KA 371 +A Sbjct: 196 RA 197 >UniRef50_Q02YD3 16S RNA G1207 methylase RsmC n=110 Tax=Bacilli RepID=Q02YD3_LACLS Length = 227 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 12/198 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCG 238 + L+ QT++ L G VFS+ G+D G+R ++ ++D+GCG Sbjct: 39 DNQDLSHDFQTLTVDLLGLSMRFKTDRGVFSKNGIDYGSRVLLEDYQPEGAKTLLDVGCG 98 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 G +GLTL K V VD + A+ R N N A+ E ++N V + Sbjct: 99 YGTLGLTLAKKF-DLSVTMVDVNSRALDLCRQNAIDN---AVSNTEIELSNIYEAVSE-K 153 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF---HKLKKIFG 355 ++A++ NPP V E+ A L G L IV + K++++FG Sbjct: 154 YDAIISNPPIRAGK----EVVHEILTGAFDYLNDGGHLTIVIQKKQGAPSAQRKMEEVFG 209 Query: 356 NCTTIATNNKFVVLKAVK 373 NC +A + + +L++ K Sbjct: 210 NCQLVARDKGYFILRSYK 227 >UniRef50_Q0FA32 Methyltransferase, putative n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FA32_9RHOB Length = 335 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 58/283 (20%), Positives = 116/283 (40%), Gaps = 11/283 (3%) Query: 97 LDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFE 156 L S ++ L+++ ++ + ++ ++ ++ D S L+ Sbjct: 59 LKSLQNFTTINSFALVEITRSKPQSLGLIAKAFDALSENSILMIDGNKTDGIESHLKTLR 118 Query: 157 KVLG-PTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDI 215 K+ + + K I PQ+ D ++ + A +FS +D Sbjct: 119 KLFKIEGIISKSHGKIFWIK-KATRPQILDQWVQGLEPVK-IEKDYKTKAGIFSANHIDK 176 Query: 216 GARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAK-VVFVDESPMAVASSRLNVET 274 + ++ LP++L G DLG G G + LL N + K + V+ A+ ++LN+ Sbjct: 177 ASSLLLKCLPKHLGGIGADLGAGWGYLSNELLKTNDKIKSICLVEADWNALHCAKLNIND 236 Query: 275 NMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKING 334 R +F +A + +++ ++ NPPFHQ ++ A L G Sbjct: 237 ------SRAKFEWTDATQH-KNVKYDFIIMNPPFHQTRKAEPDIGKSFIIQASELLTPKG 289 Query: 335 ELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRR 377 +L++VANR L Y L F + +I +F V+ A++ ++ Sbjct: 290 QLWMVANRQLAYETTLDTCFTSVNSITETPQFKVINALRPKKQ 332 >UniRef50_Q1IXW7 rRNA (Guanine-N(2)-)-methyltransferase n=3 Tax=Deinococcus RepID=Q1IXW7_DEIGD Length = 407 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 78/370 (21%), Positives = 126/370 (34%), Gaps = 33/370 (8%) Query: 16 FPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYI 75 FP D L AW + +RG VL L A G L +L P + Sbjct: 61 FPEVDPAQALLAW---------LMRKDRVRGEVLDL-SALGGLLASL----PGVTLRAVE 106 Query: 76 SELATRENLRLNGIDE-SSVKFLDSTADYPQQPGVVLIKVP--KTLALLEQQLRALRKVV 132 A L G+D ++ D +A +P++ V + + + A Q+ Sbjct: 107 GSAAALTVLARAGLDAFAAAPGDDLSARWPERARTVALVLAGDRGNAYALSQVAWAHACT 166 Query: 133 TSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSW 192 + + + G T R+ P + Sbjct: 167 PPGGTLYLAGDRDKGFDRYVRAAARAFGTGETIARDGGMRVAKLVRRPGPTPAYPDPEGY 226 Query: 193 KLEGTDWTIHNHANVFSRTGLDIGARFFMQHLP-------ENLEGEIVDLGCGNGVIGLT 245 E + VFS D + L + ++DLGCG G++G Sbjct: 227 --EAFGVKVVGLPGVFSAAKPDKATTLLLGTLEALDLTELDLTGKRVLDLGCGTGLMGAW 284 Query: 246 LLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCN 305 + A+V VD +V S++ + N + +++ + + F+ +L N Sbjct: 285 AARR--GAQVTLVDGDLQSVRSAQATLAANGLSG----DVFLSDVDAALGERTFDVILTN 338 Query: 306 PPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNK 365 PPFH + +VA E A R L G LY+VAN L Y L+ + G + Sbjct: 339 PPFHVGRGVVLDVAREFIAAAGRRLNPGGTLYLVANEPLPYETPLRSL-GELRALRREGD 397 Query: 366 FVVLKAVKLG 375 F VL A + G Sbjct: 398 FKVLAATRAG 407 >UniRef50_Q045V2 16S RNA G1207 methylase RsmC n=22 Tax=Bacilli RepID=Q045V2_LACGA Length = 217 Score = 177 bits (449), Expect = 7e-43, Method: Composition-based stats. Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 19/216 (8%) Query: 168 WKKARLINCTFN------EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFM 221 K+AR+I N P V + ++ D A VFS+ +D G+ + Sbjct: 8 IKEARIIMTKKNQMYFAANPDAKHDEHLVDYHIDDIDLKFTTDAGVFSKLRIDYGSGVLI 67 Query: 222 QHLPE--NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEA 279 + + E E I+D+G G G +GL P +V VD + A+ ++ N + N Sbjct: 68 KTMKELTFPEAGILDVGTGYGPMGLFAAKFWPDQEVDMVDVNERAIDLAKRNAQFN---H 124 Query: 280 LDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 339 +D +N V ++ ++ NPP + D + A+ L NG L +V Sbjct: 125 IDNVNIYESNIYEQV-DNKYGLIITNPPIRAGKKVVDQI----LSEAKEHLVENGILLVV 179 Query: 340 ANRHLDYF---HKLKKIFGNCTTIATNNKFVVLKAV 372 + + K++GNC +A + + +L + Sbjct: 180 IQKKQGAPSAKKLMTKVYGNCEILARDKGYYILMSK 215 >UniRef50_D2LVZ2 Methyltransferase small n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LVZ2_BACS4 Length = 200 Score = 177 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 11/199 (5%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLP-ENLEGEIVDLGC 237 +P + + ++ + +T + +FS+TGLD G+R ++ N+ G IVD+GC Sbjct: 8 EKPTVKSERKKITETITNDQYTFYVDRGIFSKTGLDFGSRLLIESFELPNVVGTIVDVGC 67 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G G I ++L +NP + +D + AV + NV+ N + M +N L G E Sbjct: 68 GWGPISISLAKRNPNIDFIALDINERAVKLTEENVKLN---GVTNLHVMQSNLLEGHEGK 124 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF---HKLKKIF 354 ++A++ NPP ++++ A L NGE++IV + KL+ + Sbjct: 125 YYSAIITNPPIRAGKNT----VFKLYEQAANALVKNGEIWIVIQKKQGAPSTIAKLEDLG 180 Query: 355 GNCTTIATNNKFVVLKAVK 373 + I + + +++ K Sbjct: 181 FDVEVIKKSKGYYIIRGKK 199 >UniRef50_C5BI28 RNA methyltransferase, RsmC family n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BI28_TERTT Length = 342 Score = 177 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 72/335 (21%), Positives = 124/335 (37%), Gaps = 28/335 (8%) Query: 50 ILNDAF-----GALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYP 104 IL++ F G+LS + + D S G + + Sbjct: 20 ILDENFRTEDAGSLSLTSTDLVMTNRFDVANSSPHL-------GRAATVFSDFNFKEIAE 72 Query: 105 QQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTT 164 P + +V K A+ + L + S ++ + D +E K LG Sbjct: 73 YMPAAICYRVSKERAVTNRVLNQSASRLDSGGMLLLCGEKNDGIKGYVEKAVKQLGFDGA 132 Query: 165 TLAWKKARLINCTFN----EPQLADAPQTVSWKLEGTDWTIH--NHANVFSRTGLDIGAR 218 K+ L T EP D Q +L +D + V+ +D G+ Sbjct: 133 --IEKQGNLYIATLTRNSREPAPLDDKQYTHLRLINSDVAAAYLSKPGVYGWNKIDEGSE 190 Query: 219 FFMQHL---PENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN 275 + + P + G +DLGCG G +G+ LL Q +++ D + AV + + N Sbjct: 191 LLQRSIMDEPVAINGTALDLGCGYGYLGVGLLKAGWQ-QIIATDNNAAAVLACNATLTEN 249 Query: 276 MPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGE 335 + + + S +E + + V+CNPPFHQ + ++ +A R LK G Sbjct: 250 GAQ---NFSVVAADCGSSIE-RKADLVVCNPPFHQGFGVESSLTNRFVANAARLLKPGGT 305 Query: 336 LYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLK 370 V N + + F + T+A N KF V++ Sbjct: 306 ALFVVNVFIGLERAGAQYFSHQETLANNKKFKVIR 340 >UniRef50_B6YSP9 Ribosomal RNA small subunit methyltransferase C n=5 Tax=Thermococcus RepID=B6YSP9_THEON Length = 209 Score = 177 bits (448), Expect = 9e-43, Method: Composition-based stats. Identities = 44/196 (22%), Positives = 78/196 (39%), Gaps = 12/196 (6%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGN 239 EP + +T+ L G + + VFS LD G ++ + + ++DLGCG Sbjct: 22 EPNVPLKTKTIEVCLRGHCFKFITASGVFSFGKLDRGTELLIESMILDGNWRVLDLGCGY 81 Query: 240 GVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRF 299 G IG+ VV D + AV+ +R N++ N + E + V +F Sbjct: 82 GAIGIVASRFVE--YVVMTDVNRRAVSIARKNLKINN---VRNAEVRWGSLYEPVRGEKF 136 Query: 300 NAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY---FHKLKKIFGN 356 + ++ NPP H + E+ +A R L G L +V +++ F Sbjct: 137 DTIITNPPVHAGK----EILREIVINAPRHLNDGGLLQLVIKTKQGAKYIKGLMEEHFTE 192 Query: 357 CTTIATNNKFVVLKAV 372 +A + + V + Sbjct: 193 VRELAKGSGYRVYAGI 208 >UniRef50_Q89AI2 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=RSMC_BUCBP Length = 326 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 109/268 (40%), Gaps = 7/268 (2%) Query: 105 QQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTT 164 Q V++ P + Q+ + +++ +I R L +K + T Sbjct: 59 QNSDVIIYIWPNSKLEALFQINYIISLLSKTQKIFFLGSNRSGIKCIQNLLKKWIIITKI 118 Query: 165 TLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL 224 + L + + + + + + VFS +D G + M Sbjct: 119 -DSSNHCILYSGIIVLKPIFLYENFIKFNKWN-NIVVKTIPGVFSYNNIDHGTKLLMSTC 176 Query: 225 PENLEGE-IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRC 283 +NL + ++D+GCG+GV+ L P+ K+ +D + A+ SS+L + +N Sbjct: 177 TKNLRWKTVLDIGCGSGVLSTYLATIFPEIKLTLIDSNIAALESSKLTLTSNNVCG---- 232 Query: 284 EFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 343 E +N S V F+ ++ NPP H ++ L ++ + ++ + L GE+ IV ++ Sbjct: 233 EIFPSNIYSNVHYQNFDLIISNPPLHVENKLNFSIIDNIIKNSVKYLSNKGEIRIVTLKN 292 Query: 344 LDYFHKLKKIFGNCTTIATNNKFVVLKA 371 + F T + T++ + V +A Sbjct: 293 VPCHKSFTLYFKKYTILKTSSHYKVYQA 320 >UniRef50_A0YF73 16S ribosomal RNA m2G1207 methyltransferase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YF73_9GAMM Length = 350 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 61/293 (20%), Positives = 109/293 (37%), Gaps = 26/293 (8%) Query: 93 SVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTL 152 + D + + +V K A++ + A + + D + L Sbjct: 65 QLSDYDFSPMPASSFDTLYYRVSKEKAVVHHIINAALNCLREGGELFLAGYKSDGIKTYL 124 Query: 153 --------ELFEKVLGPTTTTLAWKKARLINCTFNE-PQLADAPQTVSWKLEGTDWTIHN 203 E+ EK G T T+A I C + +L D + Sbjct: 125 TKAAGLLGEMGEKQRGNKTATMAA-----ILCRGGDGERLDDKDYPSQSSIAFAGINFIT 179 Query: 204 HANVFSRTGLDIGARFFMQHLPENLE------GEIVDLGCGNGVIGLTLLDKNPQAKVVF 257 +F +D G++ + L + ++ +VDLGCG G I + + + A + Sbjct: 180 KPGIFGWNKIDQGSQLLIDQLADEVKLMAHVPETVVDLGCGYGFISV-MASRIVNATFIA 238 Query: 258 VDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDN 317 D + A+ + N + ++++ + +E + + VLCNPPFHQ + D Sbjct: 239 SDNNMAAINACTENFRQHGVSG----SVVVDDCAADIE-LKADMVLCNPPFHQGFEVEDQ 293 Query: 318 VAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLK 370 + + + R L G V NR + K KK F TIA N +F V++ Sbjct: 294 LTEKFLRASGRLLNRKGVALFVVNRFIPLERKAKKWFKLVETIADNGRFKVVR 346 >UniRef50_UPI0000382BBF COG2813: 16S RNA G1207 methylase RsmC n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000382BBF Length = 213 Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 58/222 (26%), Positives = 88/222 (39%), Gaps = 15/222 (6%) Query: 157 KVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGT---DWTIHNHANVFSRTGL 213 + G T + R+ CT P+ + + + +FS L Sbjct: 2 RSFGCAVTDEPRRHHRI--CTALRPETPSGLDAAVAEGAPRHIDNLALCTQPGIFSWDRL 59 Query: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273 D G ++HLP L G D GCG G++ +L A + +D AVA +R NV+ Sbjct: 60 DPGTALLLRHLPA-LSGRGADFGCGLGILARAVLTSPKVASLALIDIDRRAVAMARRNVD 118 Query: 274 TNMPEALDRCEFMINNALSGVEPF--RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLK 331 R + L G EP + V+ NPPFH A + A L+ Sbjct: 119 E------ARASHHWAD-LRGAEPALSGLDFVVTNPPFHDGGAEDQALGRAFIARAASALR 171 Query: 332 INGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 G L++VAN HL Y L+ F + T + T + + +A K Sbjct: 172 PGGTLHLVANAHLPYEAPLRDAFRSVTPVVTEGGYKLFEARK 213 >UniRef50_C3RJV2 16S rRNA m(2)G 1207 methyltransferase n=4 Tax=Bacteria RepID=C3RJV2_9MOLU Length = 197 Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 86/198 (43%), Gaps = 13/198 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLP-ENLEGEIVDLGC 237 N L P+ + G + + VFS+ +D G+R + + + + ++D+GC Sbjct: 7 NNEDLISEPEQFIFTYRGKELIFTSDHGVFSKKMIDFGSRVLLDAIELDEGKSTLLDVGC 66 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G G G+ L P ++ +D + A+ ++ N+ N EA +++ V Sbjct: 67 GYGTFGVALKSAYPALEIDMIDVNERALLLAKQNLAANNLEA----NVYLSSVYENVT-N 121 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK---LKKIF 354 +++ ++ NPP + A+ L ++GE+++V + L+ +F Sbjct: 122 KYDVIVTNPPIRAGKETVTKI----LVEAKEHLNLHGEIWVVIQKKQGAPSAKKNLESVF 177 Query: 355 GNCTTIATNNKFVVLKAV 372 GN + + + +LKA+ Sbjct: 178 GNANVVKKDKGYYILKAI 195 >UniRef50_B0UBH2 Methyltransferase small n=17 Tax=Alphaproteobacteria RepID=B0UBH2_METS4 Length = 312 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 67/269 (24%), Positives = 102/269 (37%), Gaps = 13/269 (4%) Query: 108 GVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLA 167 VV++ P T + LR V+ R+ A A +D S L G A Sbjct: 54 EVVILAPPGTAERRAVLAQGLR-VLRPSGRLTALAP-KDRGGSRLGREMAGFGCAVAETA 111 Query: 168 WKKARLINCTFNEPQLADAPQTVSWKLEG---TDWTIHNHANVFSRTGLDIGARFFMQHL 224 + R+ C P + + D + +FS +D G + L Sbjct: 112 KRHHRI--CRAERPAAPVGIEAALAEGAPRYLPDLGLWTQPGIFSWNRIDPGTALLLDTL 169 Query: 225 PENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCE 284 P L+G DLGCG GVI +L + D AVA++R NVE Sbjct: 170 P-PLKGRGADLGCGLGVIARAVLASPAVTALTLADIDRRAVAAARRNVEDPRAHVAWADA 228 Query: 285 FMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL 344 + P R + V+ NPPFH + + + A L+ G L++ AN HL Sbjct: 229 -----RRADALPGRLDFVVTNPPFHLKGSEDQGLGQAFIRRAAEVLRPGGALWLTANLHL 283 Query: 345 DYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 Y L + F T A+ + + V +A++ Sbjct: 284 PYEAVLAEAFRTVTARASGHGYKVYEAIR 312 >UniRef50_D2R2V9 Methyltransferase small n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R2V9_9PLAN Length = 336 Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats. Identities = 70/328 (21%), Positives = 130/328 (39%), Gaps = 21/328 (6%) Query: 56 GALSCALAEHKPYS-IGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVV--LI 112 G L+ A AE P + ++ ++ ++ + ++ + G+ L+ Sbjct: 22 GQLAAAFAEQNPDVPVTLFHVDAFHAEQSRVTYFPAPGKLEIVLASDPPVGEVGLAAMLV 81 Query: 113 KVPKTLALLEQQLRALRKVVTSDTRIIAGA---KARDIHTSTLELFEKVLGPTTTTLAWK 169 ++ L+ L++ + ++IA K + +H LELF KV T L K Sbjct: 82 ELHGEAELVRDLLQSFHDRLAIGGQLIAATDHPKDQWLHEQLLELFPKV-----TRLPQK 136 Query: 170 KARLINCTFNEPQLADAPQTVSWKLEGTD--WTIHNHANVFSRTGLDIGARFFMQHLPEN 227 + + T P + D + VF+ +D GAR + + Sbjct: 137 RGVVYRATKQAPLKKHRSFVAQFPCRDGDHLLQLQTRPGVFNHRSVDAGARALLSAVEVR 196 Query: 228 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMI 287 ++D+GCG GV+GL + + P A V+ +D A+ ++ + E N L + + Sbjct: 197 AGESVLDIGCGCGVVGLVICKRLPTATVLAIDSHSRAIECTQASAERNE---LPQLTARL 253 Query: 288 NNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF 347 + + V F+ V NPP+ +A A R LK G LY V Y Sbjct: 254 DPSHKSVPDASFDVVAMNPPYFSNF----RIAELFLQTATRALKPGGRLYSVTKTPEWYL 309 Query: 348 HKLKKIFGNCTTIATNNKFVVLKAVKLG 375 +LK+ + N + N ++V++A + Sbjct: 310 ERLKEGWTNVEAVPVKN-YIVVRAERSK 336 >UniRef50_A1AW50 Methyltransferase small n=5 Tax=Gammaproteobacteria RepID=A1AW50_RUTMC Length = 199 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 11/205 (5%) Query: 172 RLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE 231 R + + P+L T+ L G D T+ VFS +D G FM+HL + + + Sbjct: 3 RDMFTKKDIPRLKQD-LTIQTNLLGIDLTLKTRWGVFSPRSIDDGTELFMKHLRISNDDK 61 Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA- 290 +DLGCG G IGL + PQ +V VD+ +AV S +NV+ N ++ + ++NA Sbjct: 62 CLDLGCGYGPIGLAVAKSCPQGEVHMVDKDFVAVELSNINVKLN---HINNAQAYLSNAF 118 Query: 291 LSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK- 349 LS + F+ +L N P + + A LK NG++ V+ L +F K Sbjct: 119 LSVNKTNYFDKILSNVPAKVGREQLSIILY----DAYDALKPNGKIMFVSINGLRHFIKD 174 Query: 350 -LKKIFGNCTTIATNNKFVVLKAVK 373 K +FGN + K+ + +A+K Sbjct: 175 NFKSVFGNYKKLKQGQKYTISQAIK 199 >UniRef50_A9KTA1 Methyltransferase small n=3 Tax=Firmicutes RepID=A9KTA1_CLOPH Length = 207 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 81/189 (42%), Gaps = 6/189 (3%) Query: 190 VSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDK 249 + +E VFS + D G + ++ + ++DLGCG G++G+ Sbjct: 2 IHVTIEDISLDFITDPEVFSPSFADRGTLAMLSYVTFDNSDTLLDLGCGYGLVGIYASKV 61 Query: 250 NPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFH 309 A+V D S AV S+ N E N + LD + ++ + ++ +L NPP+H Sbjct: 62 LSPARVTMCDISEKAVELSKKNAEYN--QVLDELTILQSDGFRNLPVDEYSLILSNPPYH 119 Query: 310 QQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVL 369 + +V + R L + G+LY+V R Y +K+ +FG + ++ + Sbjct: 120 ----VDFSVPKHFIEESYRRLIMGGKLYMVTKRKDWYKNKIISVFGGVEIHEKDGYYIFI 175 Query: 370 KAVKLGRRR 378 + ++ Sbjct: 176 AQKRPKGKK 184 >UniRef50_C8WTY2 Methyltransferase small n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTY2_ALIAD Length = 199 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 11/198 (5%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCG 238 +P + V + G + VFS+ GLD G R ++ + +DLGCG Sbjct: 7 GDPSAPSEERVVRVQARGVTVALWTDRGVFSKAGLDEGTRRLIESVDLTGAASALDLGCG 66 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 G + L P + +D + AV +R N +P+ + + ++ + F+ Sbjct: 67 YGPVTAILARVYPGVQWWMIDVNRRAVELARRNTADLVPQPV----VLQHDGIPPDFEFQ 122 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFH---KLKKIFG 355 F+ VL NPP A + ++ ARR LK G+L++V + KL+++F Sbjct: 123 FDHVLLNPPIRAGKAT----VFRLYEEARRALKPGGKLWVVIQKKHGAPSTEVKLRELFE 178 Query: 356 NCTTIATNNKFVVLKAVK 373 + V AV+ Sbjct: 179 RVDVAHRKAGYFVFCAVR 196 >UniRef50_Q1YVK1 RsmC protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YVK1_9GAMM Length = 353 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 66/360 (18%), Positives = 131/360 (36%), Gaps = 34/360 (9%) Query: 29 EAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPY-SIGDSYISELATREN---- 83 + + L QQL D E G LI+ D + P+ +I S ++ R N Sbjct: 3 DPSVALLAQQLHDLE--GSCLIIADEN-------WDDAPWMTIAQSGNAKRILRSNRYEI 53 Query: 84 --LRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAG 141 + D +L +V K A+ + ++ D ++ Sbjct: 54 AQAATQAGLSTQFSDFDFNDLETASFDSILFRVSKERAVSHHVINQASVLLKRDGTLMLS 113 Query: 142 AKARDIHTSTLELFEKVLGPT---TTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTD 198 + D + K+ G + + +RL + + +L D + + Sbjct: 114 GEKTDGVKTYTSHANKLFGDNCQPRKSGNYYLSRLTKYSDDGKRLDDKNYLALRTIGSPE 173 Query: 199 -WTIHNHANVFSRTGLDIGARFFMQHLPE--------NLEGEIVDLGCGNGVIGLTLLDK 249 + + +F +D G+ + LP+ N ++DLGCG G + + Sbjct: 174 HLPLQSKPGIFGWNKIDQGSALLIHQLPQFIQSFGEANRPQSLLDLGCGYGFLSCAAAQQ 233 Query: 250 NPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFH 309 K+ D + A+ + ++N + + + +A +E RF+A++CNPPFH Sbjct: 234 G-LTKITATDNNAAALKACKVNFDALEVDG----TVLAGDAGCQIEE-RFDAIICNPPFH 287 Query: 310 QQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVL 369 Q + + + + ++R L G V N + K + F +A +N F ++ Sbjct: 288 QGFNIDSELTAKFLNASKRLLAPRGRALFVVNNFIPLEKKAQDYFPRVREVARSNSFKLI 347 >UniRef50_C1A9K7 rRNA methyltransferase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9K7_GEMAT Length = 447 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 58/286 (20%), Positives = 95/286 (33%), Gaps = 21/286 (7%) Query: 105 QQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTT 164 +V I++P ++ + +++ + + S +L + V G T Sbjct: 165 GSVALVTIRIPTDRIGVQLAVAEAFRMLAVGGVCLLAGANDEGAKSAAKLLQAVFGEATV 224 Query: 165 TLAWKKARLINCTFNEPQLAD-----APQTVSWKLEGTDWTIH------------NHANV 207 R++ + D P V Sbjct: 225 EAQHSGHRMVRAVKRHDRAGDHAIFALPWLDLGHFHAVPVQFAGNGNPALAFRQFTRPGV 284 Query: 208 FSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVAS 267 FS LD + ++DLGCG G +G+ ++ V+ AV Sbjct: 285 FSWEHLDEATVLLADVMNIRRGDRVLDLGCGAGALGVVASIRSGVPAVLAD-ADADAVRG 343 Query: 268 SRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHAR 327 ++ + + ++ S VE F+ V+ NPPFH ++ V A Sbjct: 344 AQRTAREA---GVPDVRVLASDVASAVEDQAFDVVVSNPPFHVGKSIDLTVPRAFIDDAW 400 Query: 328 RCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 R L G LYIVANR L Y + FG T +F VL AV+ Sbjct: 401 RTLAPGGRLYIVANRTLPYERLIDARFGEVRTAHDGRRFKVLGAVR 446 >UniRef50_Q9V1A1 Ribosomal RNA small subunit methyltransferase C (RRNA (Guanine-n2-)-methyltransferase) (16S rRNA M2G1207 methyltransferase) n=4 Tax=Thermococcaceae RepID=Q9V1A1_PYRAB Length = 195 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 47/197 (23%), Positives = 82/197 (41%), Gaps = 12/197 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCG 238 EP + + + + G + + VFS LD G ++++ + +I+DLGCG Sbjct: 7 REPNVPLKTKQIDVCIRGYCFKFITASGVFSFGKLDRGTELLIENMILKPDWKILDLGCG 66 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 GVIG+ VV D + AV +R N++ N + E + N VE + Sbjct: 67 YGVIGIVASRF--VNYVVMTDINKRAVQIARKNIKIN---GVKNAEVRLGNLYEPVEGEK 121 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY---FHKLKKIFG 355 F++++ NPP H ++ E+ +A L G L +V L +K F Sbjct: 122 FHSIITNPPVHAGK----DILREIVINAPNYLHDGGMLQLVIKTKLGAKFIKDLMKDTFT 177 Query: 356 NCTTIATNNKFVVLKAV 372 +A + + V + Sbjct: 178 EVVELAKGSGYRVYAGI 194 >UniRef50_C7NCQ1 Methyltransferase small n=5 Tax=Fusobacteriaceae RepID=C7NCQ1_LEPBD Length = 209 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 90/206 (43%), Gaps = 14/206 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL------PENLEGEI 232 + ++ + + + +E ++ VFS+T +D G ++ +N + ++ Sbjct: 7 EKQEVKSDKKIIKYTIENKNFEFITDNGVFSKTKVDFGTDVMLKVFLRENQNKKNQKFDV 66 Query: 233 VDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 292 +D+GCG GV+ + + K++ D + A+ ++ N+ N + EF I + + Sbjct: 67 LDIGCGYGVVSVIIKSFFENTKIISSDVNERALELTKENLLKNNAIKNENEEFEIRKSFA 126 Query: 293 GVE-PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH---LDYFH 348 +F+ +L NPP ++++ + L NGE Y V Sbjct: 127 FDNISEKFDVILSNPPIRAGKQT----IFQIYEKSSEHLNSNGEFYCVIQTKHGAKSTQK 182 Query: 349 KLKKIFGNCTTIATNNKFVVLKAVKL 374 KL++IF NC T+ N + + + +K+ Sbjct: 183 KLEEIFRNCETLEINAGYRIFRCIKI 208 >UniRef50_A8F736 Methyltransferase small n=1 Tax=Thermotoga lettingae TMO RepID=A8F736_THELT Length = 210 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 13/201 (6%) Query: 179 NEPQLADAPQTVSWKLE-GTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGC 237 +P +T + KL+ G + + VFS +D + ++H + + +++DLGC Sbjct: 17 RKPNSVLKIRTANLKLKNGRIYKFKTPSGVFSFGKVDKATKILVEHAIVHGK-KVLDLGC 75 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G GV+G+ + + P ++V D + AV +R+N + N + +C + + Sbjct: 76 GYGVVGIVVKGEYPDSEVYMSDVNERAVEFARINAKDNNVDVTIKC----GSFYDPWQEE 131 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA--NRHLDYFHK-LKKIF 354 +F+ +L NPP A + +E + L G L +VA N+ Y K +++ F Sbjct: 132 KFDVILLNPPMAAGKATVLRMIYESI----KHLNEKGSLQVVAYHNKGGSYIKKAMQETF 187 Query: 355 GNCTTIATNNKFVVLKAVKLG 375 GN I + K+V+L Sbjct: 188 GNVEDICKEGGIRIYKSVRLK 208 >UniRef50_Q057M1 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=RSMC_BUCCC Length = 343 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 109/272 (40%), Gaps = 19/272 (6%) Query: 105 QQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTT 164 ++ + K + L L ++ I + + S ++F L Sbjct: 82 SSYKQLIFFLTKNKKEFKLHLTFLLSHISKTCVIYVVGEKKCGINSISKIFSNYLIFKKI 141 Query: 165 TLAWKKARLINCTFNEPQLADAPQTVSWKLEGT----DWTIHNHANVFSRTGLDIGARFF 220 A C+ + ++ P+ K + TI + VF +D G++ Sbjct: 142 DYAR------TCSLYKAKIMKLPKFYLHKFINIYIWNNITIQSLPGVFGYKKIDTGSKLL 195 Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEAL 280 + + + G+I+D+G G G++ + L KNP K+ D A+ S+ N+ N Sbjct: 196 ISTFNKKINGKILDIGSGTGILSIALAKKNPLIKITLTDIYDAAIWCSKNNLIKNNLIG- 254 Query: 281 DRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 340 + + ++ S ++ R++ ++ NPP H + + ++ ++++ LK GEL IV Sbjct: 255 ---KVLFSDIYSHIK-KRYDLIISNPPIHYNLKINLKILKKIIKNSKKHLKKKGELRIVI 310 Query: 341 NRH--LDYFHKLKKIFGNCTTIATNNKFVVLK 370 + L Y KI N + N + V++ Sbjct: 311 SSFISLKYIINFNKI--NFKILLKNKSYTVIQ 340 >UniRef50_UPI00016C52FC methyltransferase small n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C52FC Length = 348 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 72/317 (22%), Positives = 117/317 (36%), Gaps = 25/317 (7%) Query: 67 PYSIGDSYISELA----TRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLE 122 P + +L RE L G V D D PQ+ G V+ + + Sbjct: 39 PETEVTCAQLDLHQTDRVRETLAEVGASAEVVTVAD-MWDLPQRFGTVIFP---ASSQAD 94 Query: 123 QQL-----RALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCT 177 ++L V+T + ++ + + +L +K+ G T A + T Sbjct: 95 RELKLDIVEQAAHVLTVGGLFLTLSEY-ERDSQFAKLQKKIFGKCGETPASENGMAFFST 153 Query: 178 FNEPQLADAPQTVSWKL---EGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVD 234 E + V + G + FS D G+R ++ ++D Sbjct: 154 KAEESGSRRRHEVKYHAKIGAGASMEFVSRPGTFSYGRFDAGSRAMLEVAEIRPGDTVLD 213 Query: 235 LGCGNGVIGLTL-LDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG 293 LGCGNG +G P A+V F+D S A+A + LN + N + F+ L G Sbjct: 214 LGCGNGAVGCLAGAMAGPDARVTFIDSSLRAIALAELNAKAN---GVTNTRFVNATRLQG 270 Query: 294 VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKI 353 +E +F+ +L NPP++ + AR LK G Y+V + Sbjct: 271 LEEDKFDVILANPPYYA----KSEITRLFIEGARDLLKPGGRYYLVTKMPTAVMPLIFDT 326 Query: 354 FGNCTTIATNNKFVVLK 370 FG+C+ I VVL Sbjct: 327 FGDCSVIENRGYAVVLS 343 >UniRef50_B1MVU0 16S RNA G1207 methylase RsmC n=11 Tax=Lactobacillales RepID=B1MVU0_LEUCK Length = 213 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 13/198 (6%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL--EGEIVDLGC 237 P Q ++L + VFS++ +D G R ++ L + +G+I+DLG Sbjct: 17 NPNSEHHYQNFEFELLNHKLHFTTDSGVFSKSTVDFGTRTMLEALETVIINDGKILDLGT 76 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G G +G+ + + +V VD + A+ ++ N + N L R +N + Sbjct: 77 GYGPVGIAIAKAMSR-QVDMVDVNERALELAQQNAQKNGVTQLTRI--FQSNIYDKITD- 132 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK---LKKIF 354 ++ +L NPP A V M A + L+ G+L V + + IF Sbjct: 133 KYALILTNPPIRAGKA----VVTVMLQDAIKHLQPGGKLIAVLQKKQGAPSAQKNMMTIF 188 Query: 355 GNCTTIATNNKFVVLKAV 372 GN IA N + +L++ Sbjct: 189 GNARIIAKNKGYYILEST 206 >UniRef50_B8D5U1 Ribosomal RNA small subunit methyltransferase C (RRNA (Guanine-n2-)-methyltransferase) n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D5U1_DESK1 Length = 200 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 6/193 (3%) Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGC 237 + +P + S+ + G + ++ ++FS + LD G R ++++ G ++D+GC Sbjct: 11 YYKPGQPGERKLFSFTIHGYTFEFISYTSLFSGSSLDDGTRLLLENIMVPRSGVVLDIGC 70 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G GVIG+ + NP +V D +P+AV +RLN N E DR + + VE Sbjct: 71 GYGVIGIVVAKLNPLLEVYMTDVNPLAVKVARLNASRNNVE--DRVVVLQGDRYKPVEGM 128 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNC 357 +FNA+ NPP + +++ ARR L +G V R +Y + + + Sbjct: 129 KFNAIYSNPPLSAGMRIVEDIVLG----ARRYLTEDGFAQFVLARGGEYLAEKARESYSI 184 Query: 358 TTIATNNKFVVLK 370 + +++L Sbjct: 185 VDAKSKKGYILLY 197 >UniRef50_D2RAI3 Methyltransferase small domain protein n=27 Tax=Actinobacteridae RepID=D2RAI3_GARVA Length = 232 Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 48/226 (21%), Positives = 99/226 (43%), Gaps = 19/226 (8%) Query: 163 TTTLAWKKARLINCTFN---EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARF 219 T + +K + I+ P D +T+ L + + VFS + LD+G Sbjct: 13 TKSPKSEKTQKISGEQYFSATPSSCDERRTLHVTLRNHETVVQVSNGVFSASKLDLGTSV 72 Query: 220 FMQHLPENLE-GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE 278 ++H P+ E G+ +D+GCG G I + + ++P+A++V VD + A+ + LN + + Sbjct: 73 LLKHAPKPPENGKFLDIGCGWGPISIAMGLESPEAEIVAVDVNERALELTELNAKNAGLK 132 Query: 279 ALDRCEFMINNALSG---VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGE 335 + ++++AL +E F+ + NPP + ++ LK+ G Sbjct: 133 HIR--TSLVDDALKENNTLEFNNFDLIWSNPPIRVGKEMLHDI----LMTWIPRLKVGGA 186 Query: 336 LYIVANRHLDYF---HKLKKIFGN---CTTIATNNKFVVLKAVKLG 375 Y+V ++L L + G A++ + +++ +K Sbjct: 187 AYLVVQKNLGSDSLIPWLAENLGENYIVEKYASSKGYRIIEVIKTK 232 >UniRef50_A3DND7 Methyltransferase small n=1 Tax=Staphylothermus marinus F1 RepID=A3DND7_STAMF Length = 193 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 8/194 (4%) Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGC 237 + + + G ++ ++FS +D G ++++ EGE++D+GC Sbjct: 4 YYRKGYPGRKTLIPLTIRGVTLEFVSYTSLFSGREVDKGTYLLLKYIDVPDEGEVLDVGC 63 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G GVIGLT+ NP+ KV VD +P+AV ++ N + N E + + + V+ Sbjct: 64 GYGVIGLTIAKLNPRLKVYMVDINPLAVKITKYNAKLNNLE--KQVVVLQGDVYEPVKNL 121 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF-HKLKKIFGN 356 RFNA+ NPP + + E A LK +G V R +Y K ++I+ + Sbjct: 122 RFNAIYSNPPLSSGMYTVEKIVLE----AINYLKPDGFAEFVLARGGEYLVEKARRIYRH 177 Query: 357 CTTIATNNKFVVLK 370 +I +++LK Sbjct: 178 VESI-RKKGYIILK 190 >UniRef50_A8A8U2 Methyltransferase small n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A8U2_IGNH4 Length = 194 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 78/188 (41%), Gaps = 13/188 (6%) Query: 187 PQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTL 246 P+ V + G +FS + +D+G + + EG+++D+GCG GV+G+ + Sbjct: 13 PEVVGAWIRGAPLKFIVPRGLFSSSKVDLGTALLAEFMEIPKEGKVLDVGCGYGVLGILM 72 Query: 247 LDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP---FRFNAVL 303 NP +V VD +P+AV +++ N E N R + N + F+ ++ Sbjct: 73 AKLNPNLEVYMVDVNPVAVDAAKRNAELNGV----RVTVLQGNLYEPTDLLGIKDFSTIV 128 Query: 304 CNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV-ANRHLDYFHKLKKIFGNCTTIAT 362 NPP V E+ A LK G L +V A +++ F Sbjct: 129 SNPPLAAGK----EVVKEIIEGAPARLKSGGSLQLVMAQGGDWAKGVMEEYFKEVEV-KR 183 Query: 363 NNKFVVLK 370 + +L+ Sbjct: 184 KKGYALLR 191 >UniRef50_C4FY86 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FY86_9FIRM Length = 203 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 82/200 (41%), Gaps = 13/200 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL---EGEIVDL 235 + P A + + G + VFS+ +D G++ ++ + + +IV+L Sbjct: 8 SSPTSQHALHQIQDGVAGLTLSFQTDNGVFSKQRMDYGSKVLVEAFADAVPVGSYQIVEL 67 Query: 236 GCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE 295 G G G + + L PQA+V V+ + A ++ N + N E + + +A Sbjct: 68 GSGYGPVTIALAKLYPQAQVTGVEINERAYQLAQANSQLNRVE---NTAYQLADAGQWQA 124 Query: 296 PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK---LKK 352 + V+ NPP V + A+ L+ GEL++V + +++ Sbjct: 125 SQAPDFVVTNPPIRAGK----QVIQQFVRSAQANLRPGGELWLVIQKKQGAPSMETFMEE 180 Query: 353 IFGNCTTIATNNKFVVLKAV 372 +FGN + + +LK+ Sbjct: 181 VFGNVELVTRYKGYWILKSK 200 >UniRef50_C2KPF6 Possible 16S rRNA methyltransferase n=4 Tax=Actinomycetales RepID=C2KPF6_9ACTO Length = 282 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 10/195 (5%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEI-VDLGCG 238 P A P+ + +L G + IH + VFS GLD G ++ +P+ EG + VD+GCG Sbjct: 88 NPSAAARPRELEVELAGMTFRIHTDSGVFSGDGLDKGTAVLLRKVPKLPEGGVFVDVGCG 147 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 G + L + + P A+VV VD + A+ + N N L+ AL+ + Sbjct: 148 WGPLSLVMARQRPAARVVAVDVNARALDLTAKNARENGLGNLEVLA--ETAALAQLADGS 205 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL--DYFHKLKKIFGN 356 + + NPP + M+ R L+ G Y+V R+L D F + G Sbjct: 206 VDVIWSNPPVRIGK----DALHAMWTAWRVKLRPGGVAYLVMGRNLGADTFAAWARDSGW 261 Query: 357 -CTTIATNNKFVVLK 370 +A++ F VL+ Sbjct: 262 ETERLASSKGFRVLQ 276 >UniRef50_B3PHG8 Putative ribosomal RNA small subunit methyltransferase C n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHG8_CELJU Length = 357 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 107/291 (36%), Gaps = 20/291 (6%) Query: 92 SSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTST 151 S+ D V ++ K L+ L + + ++ + + + Sbjct: 66 SAFHDFDLRQQAAASLDAVFYRISKEKPLVHHLLNQAWRCLKIGGKLYLSGQKNEGIKTF 125 Query: 152 LELFEKVLGPTTTT----LAWKKARLINCTFNEPQLADAPQTVSWKLEGTD--WTIHNHA 205 E +LG T LA+ + +L D + ++ + + + Sbjct: 126 AEKAADLLGCARQTQKQGLAYSAILTKQGNVTQGRLLDDSDYSTLRVINPESAVPLLSKP 185 Query: 206 NVFSRTGLDIGARFFMQHLPENLEGE------IVDLGCGNGVIGLTLLDKNPQAKV---V 256 F D G+RF ++HLP L E +DLGCG G + L A + + Sbjct: 186 GQFGWNKADQGSRFLLEHLPALLRSEQLAPTTCLDLGCGYGYLTLNASKLPECASIQQWL 245 Query: 257 FVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTD 316 D + A+ S++ NV+ + + + ++ + + + +LCNPPFHQ + Sbjct: 246 LTDNNAAALLSAQANVDYHQL----NAQVVGDDCAAHLRE-PLDLILCNPPFHQGFNVEG 300 Query: 317 NVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFV 367 + + A+R LK G V N+ + K +F +A N F Sbjct: 301 ELTGKFIATAQRLLKRGGLALFVVNQFIPLEKKAAGVFRTIKLLADNGSFK 351 >UniRef50_A3K8H8 Methyltransferase, putative n=5 Tax=Rhodobacteraceae RepID=A3K8H8_9RHOB Length = 335 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 72/342 (21%), Positives = 130/342 (38%), Gaps = 27/342 (7%) Query: 45 RGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYP 104 G +++ +D AL A A+ + S ++ + T + L + Sbjct: 12 TGGLVLPDDGPLALIGAPADAPVDMLDTSRLTVIQTDAAAHDGWVARG----LPTATAPE 67 Query: 105 QQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTT 164 + ++ +P+ E R ++ +I GAK + L ++V Sbjct: 68 GRFAAAIVTLPRARDAAEA--RLALAARHANMVVIDGAKTDGVEAILKALRQRVTLDGQV 125 Query: 165 TLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL 224 + A + + LAD + + DW +FS D + + Sbjct: 126 SKAHGRCAWVR---PGDALADWLRPTQAQNAHGDWVA---PGIFSADAPDEASVA-LAAA 178 Query: 225 PENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCE 284 L+G++ DLG G G + +L + + V+ A+ +RLNV R Sbjct: 179 LSALKGDVADLGAGWGWLSRGILRHHGVKTLHLVETEKTALDCARLNVTD------PRAV 232 Query: 285 FMINNALSGVEPF--------RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGEL 336 F +A + P + +AV+ NPPFH + A R L +G+L Sbjct: 233 FHWADATAWTPPQPAGAHAPRKLDAVVMNPPFHTGRRADPALGRAFIEAAARVLAPHGQL 292 Query: 337 YIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR 378 ++VANRHL Y L +F + I +++F +L A ++ R R Sbjct: 293 WMVANRHLPYETALIALFRDVAEIGGDSRFKLLHAARVIRAR 334 >UniRef50_B8I811 Methyltransferase small n=2 Tax=Clostridium RepID=B8I811_CLOCE Length = 198 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 89/200 (44%), Gaps = 15/200 (7%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFS-RTGLDIGARFFMQHL-PENLEGEIVDLG 236 P+ + + + G+ T + + VFS T +D + +++ P + ++D+G Sbjct: 8 ENPESEIKEKRFTESICGSSLTFTSVSGVFSFETKIDRASENLIKNFTPSGMS--VLDIG 65 Query: 237 CGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 296 CG G IGL + PQ + +D + A+ ++ N +N E + +N + +E Sbjct: 66 CGYGAIGLYIKSIFPQQNITMIDVNNRALDYTKKNAASNNLS----VEALNSNLFTALEG 121 Query: 297 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA--NRHLDYFHK-LKKI 353 F+ ++ NPP L + + L NG L++VA N+ K ++ I Sbjct: 122 RTFDDIISNPPIAAGKELNT----RLITESYEHLSKNGALWLVAFHNKGGSTLKKVMETI 177 Query: 354 FGNCTTIATNNKFVVLKAVK 373 FGN T + + V K+++ Sbjct: 178 FGNVTDVDKSGGVRVYKSIR 197 >UniRef50_D2PU49 Methyltransferase small n=2 Tax=Actinomycetales RepID=D2PU49_9ACTO Length = 206 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 80/197 (40%), Gaps = 12/197 (6%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL-PENLEGEIVDLGCG 238 +P AD +TV ++ D+ + VFSR LDIG ++ + P ++DLG G Sbjct: 9 DPASADVRRTVQARIWDRDYEFTTASGVFSRDRLDIGTAVLLREVRPTPGRKVVLDLGAG 68 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 G I L +NP A V VD + A+ + +N DR + + + R Sbjct: 69 YGPIACGLAVENPDAVVWAVDVNNRALELTAINAAAAG--VGDRVHPALPDDVPD--DVR 124 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL---DYFHKLKKIFG 355 F+ + NP H +M LK G ++V ++L L + Sbjct: 125 FDEIWSNPAIHIGKPE----LHKMLLRWLSRLKPGGTAWLVVGKNLGGDSLQRWLTEQGY 180 Query: 356 NCTTIATNNKFVVLKAV 372 C +A+ F +L+A Sbjct: 181 PCDRVASAKGFRILRAT 197 >UniRef50_Q2BHC0 Probable ribosomal RNA small subunit methyltransferase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHC0_9GAMM Length = 346 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 100/275 (36%), Gaps = 20/275 (7%) Query: 108 GVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLA 167 ++ +V K ++ + + + ++I + + +K+ G + A Sbjct: 75 DSIIYRVSKEKPVVHHVINESYRCLKPGGQLIMAGDKGEGIKTYFSKGKKLFGDGQSVKA 134 Query: 168 WKK------ARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFM 221 K +L + D P T+ + + ++ VF +D G+ F + Sbjct: 135 TKDIWQVTLHKLKSDKAEPLDDKDYP-TLRVTVADEQFDYYSKPGVFGWDKVDKGSAFLI 193 Query: 222 QHLPE------NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN 275 +HL + +DLGCG G + L + V D + A+ + + N + Sbjct: 194 EHLDQFLMTLPEPPKNALDLGCGYGYLSLNISQL--DIPVTASDNNAAAILACQRNFDRY 251 Query: 276 MPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGE 335 + + + G+ +F+ ++CNPPFH ++ ++ L G Sbjct: 252 PING----KVIPASCAEGISE-KFDLIICNPPFHAGFSVDGDLTDRFLKATHDRLNERGV 306 Query: 336 LYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLK 370 V N H+ K + F IA N F +++ Sbjct: 307 ACFVTNLHIPLERKALQYFHQAECIAANGNFKLVR 341 >UniRef50_Q21JF1 16S rRNA m(2)G 1207 methyltransferase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21JF1_SACD2 Length = 361 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 105/306 (34%), Gaps = 18/306 (5%) Query: 77 ELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDT 136 +L N D + Q + +V K ++ L ++ Sbjct: 59 DLTLTHYASQNEQLHLHFSDFDFSQLNIQGVDAIFYRVSKEKPVVHHVLNNAAAILQPTA 118 Query: 137 RIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEG 196 ++ + + + L+ K LG T K+ L N + + Sbjct: 119 ALVIAGRKNEGTKTYLDKLSKQLGLNVKT--KKEGELYFGIANAHTTENTSTPLDSSNYN 176 Query: 197 T--------DWTIHNHANVFSRTGLDIGARFFMQHLPEN----LEGEIVDLGCGNGVIGL 244 D + + V+ D+ + + + + E ++DLGCG+G + + Sbjct: 177 ALREVAICCDLPMQSKPGVYGWKKFDLATQQLIAFIKQRYNNLKEHTVLDLGCGSGYLSI 236 Query: 245 TLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLC 304 + + + D + AV +++ N+ TN + + + ++ ++ F+ V+C Sbjct: 237 AVKTLH-CRSLTATDNNAAAVLATQQNLITNNL--AEAAQVVADDCAQSIQGM-FDLVVC 292 Query: 305 NPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNN 364 NPPFH+ + ++ R L +GE V N + F + + Sbjct: 293 NPPFHKGFETSRELSDLFLKSTARKLSKSGEALFVVNSFIPLEKLAMPYFKQVEKLQDDK 352 Query: 365 KFVVLK 370 F +++ Sbjct: 353 IFKIVR 358 >UniRef50_C8P1I9 Methyltransferase domain protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1I9_ERYRH Length = 194 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 87/200 (43%), Gaps = 16/200 (8%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQ-HLPENLEGEIVDLGC 237 + L + + ++ +++ + VFS+ GLD G ++ + + L+G++ DLGC Sbjct: 7 DNSNLNKNRRDIPFRFLDISFSVISDDGVFSKDGLDRGTEALLKVCVDQPLKGKVADLGC 66 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G GV+G+ L ++ VD +P +V + +N E +++ + + L G+ Sbjct: 67 GIGVVGVILSHFFSDLEMTGVDVNPRSVELANINYEKYNVNGINKIQ----DGLDGM--- 119 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR---HLDYFHKLKKIF 354 ++ V+ NPP + +F +A L +G V + K + +F Sbjct: 120 -YDFVISNPPIRVGK----EKMYSLFDNAYDVLNKDGMFIFVIRKSHGAKSAQAKCEALF 174 Query: 355 GNCTTIATNNKFVVLKAVKL 374 GNC + + + A K Sbjct: 175 GNCELLKKEKGYYIYCASKR 194 >UniRef50_A6UF35 Methyltransferase small n=17 Tax=Rhizobiales RepID=A6UF35_SINMW Length = 338 Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 61/272 (22%), Positives = 103/272 (37%), Gaps = 9/272 (3%) Query: 105 QQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTT 164 L+ K E ++ K + I+ D S + +K G Sbjct: 73 DGYDAALVLSGKHKGENEDRIAEALKRTRAGALIVVAGGKEDGIQSLRKRIDK-FGWDGD 131 Query: 165 TLAWKKARLINCTFNE--PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQ 222 + + T E + A V +++G +FS +D G+ Sbjct: 132 AMPKYHGVVFWFTRPESAAEAISALAKVPVRVDGL---FEAAPGMFSHDRVDAGSELLAS 188 Query: 223 HLPENLEGEIVDLGCGNGVIGLTLLDKNPQAK-VVFVDESPMAVASSRLNVETNMPEALD 281 LP + G D G G G + + L + +P K + + A+ ++R N+ N P Sbjct: 189 RLPRDFTGHAADFGAGWGYLSVRLAEASPTLKGIDLFEADFEALEAARANMAANAPSTPA 248 Query: 282 RCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 341 R F ++ + +++ ++ NPPFH+ HA + M A + LK G L +VAN Sbjct: 249 R--FYWHDLSTEDTRDKYDLIVMNPPFHEGHAAEPALGAAMIKAAAKALKHGGRLMLVAN 306 Query: 342 RHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 R L Y L + F N +F VL A + Sbjct: 307 RGLPYEPVLAENFKEMGETCRNARFKVLWAKR 338 >UniRef50_Q0FKY0 Methyltransferase, putative n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FKY0_9RHOB Length = 210 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 61/214 (28%), Positives = 93/214 (43%), Gaps = 13/214 (6%) Query: 163 TTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQ 222 + A K T AD + + + G + VFS D G+ + Sbjct: 10 QVSKAHGKTVWFTAT---DAFADWAREAAPNVHG----LWTAPGVFSADAPDPGSAALLA 62 Query: 223 HLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDR 282 LPE L ++ DLG G G +G LL ++ + V+ A +R NV R Sbjct: 63 ALPEKLGAQVADLGAGWGGLGAGLLTRDGIRTLHMVEADHAAFECARRNVTD------PR 116 Query: 283 CEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 342 +F +A + P +AV+ NPPFHQ ++ AR+ LK +G+L++VANR Sbjct: 117 VQFHWADATTWTPPELLDAVVMNPPFHQGRRADPSLGQAFITAARKMLKPSGQLWLVANR 176 Query: 343 HLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGR 376 HL Y L F N IA +++F +L + R Sbjct: 177 HLPYETTLAAQFRNSDEIAGDSRFKILHGSRPNR 210 >UniRef50_A5WBH5 Methyltransferase small n=5 Tax=Gammaproteobacteria RepID=A5WBH5_PSYWF Length = 202 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 10/187 (5%) Query: 190 VSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDK 249 + ++ G +FS LD G+ + H+ + + +DLGCG GV+G+T + Sbjct: 22 FTQEVLGAPMHFTTTWGIFSPEKLDAGSLMLLDHIDFQSDDDSIDLGCGYGVLGMTAARE 81 Query: 250 NPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR-FNAVLCNPPF 308 PQ + +D+ MAV +R N + N L + ++N + V+P + F+ V+ N P Sbjct: 82 CPQGQHTLIDKDFMAVEYARRNCQNN---GLSNVDVHLSNGFNHVDPNKDFSLVMSNLPA 138 Query: 309 HQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK--LKKIFGNCTTIATNNKF 366 + A ++ G Y+V L F K ++FGN + + Sbjct: 139 KVGKEQH----YLYLLDAYSKMRTGGRFYVVTINGLRQFMKRAFTEVFGNADKVKQGKTY 194 Query: 367 VVLKAVK 373 + +A+K Sbjct: 195 TITRAIK 201 >UniRef50_C7RA23 Methyltransferase small n=3 Tax=Gammaproteobacteria RepID=C7RA23_KANKD Length = 197 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 47/195 (24%), Positives = 74/195 (37%), Gaps = 10/195 (5%) Query: 181 PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG 240 P L Q L +FS +D G ++++ +DLGCG G Sbjct: 10 PGLKQDLQ-FEDTLCDFPLQFKTTWGLFSPRNIDDGTIMLLKYMDIETTDNCLDLGCGYG 68 Query: 241 VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFN 300 +G+T+ + PQ + + VD+ +AV + N E N + ++N S V FN Sbjct: 69 ALGITMAKQAPQGQTLMVDKDFVAVDYANKNCELN---GVTNATARLSNGFSAVTEKNFN 125 Query: 301 AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK--LKKIFGNCT 358 + N P + + + A L+ G Y+V L F K K+IFGN Sbjct: 126 VICSNIPAKVGN----ELLYIFLQDAWDRLEPGGTFYVVTITGLREFMKKAFKEIFGNYK 181 Query: 359 TIATNNKFVVLKAVK 373 + V K Sbjct: 182 KHKQGPAYTVASGTK 196 >UniRef50_C1YW37 16S RNA G1207 methylase RsmC n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YW37_NOCDA Length = 223 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 53/219 (24%), Positives = 81/219 (36%), Gaps = 27/219 (12%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEG-EIVDLGC 237 ++P A P T L + VFS +D+G R ++ +P EG ++DLGC Sbjct: 8 SDPGAASRPSTADLVLPDLHLRLRTDRGVFSPDKVDLGTRVLLESVPPPPEGGRLLDLGC 67 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMI---------- 287 G G I LT+ + P A+V+ VD + AV +R N + + Sbjct: 68 GYGPIALTMASRAPGARVLGVDVNARAVGLARRNAAEHGLDNARFAVVEPEGGLSVERGA 127 Query: 288 --------NNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 339 ++ + F+AV NPP V M L G ++V Sbjct: 128 SGEGAPARDDVTAQDLLGPFDAVWSNPPIRVGK----GVLHSMLRTWLGRLTPEGVAHLV 183 Query: 340 ANRHLDY---FHKLKKIFGNCTTIATNNKFVVLKAVKLG 375 RHL L + +A+ F VL AV+ Sbjct: 184 VQRHLGSDSLQKWLDEQGLPAERVASRAGFRVL-AVRRS 221 >UniRef50_A4YCT3 Methyltransferase small n=13 Tax=Sulfolobaceae RepID=A4YCT3_METS5 Length = 186 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 8/184 (4%) Query: 190 VSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDK 249 V+ + G + ++ +FS+ LD+G R +++L EG + D+GCG G IG+ + Sbjct: 8 VTDVVNGVPLNLISYPGLFSKKRLDLGTRVLLENLIIPEEGAVADVGCGYGPIGIYVAII 67 Query: 250 NPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFH 309 NP+ V +D +P+AV +SR NVE DR + + ++ LSG E FR A+ NPP Sbjct: 68 NPRLSVYMLDVNPLAVKASRENVERYGL--GDRVKVLKSDLLSGFE-FRVKAIYSNPPLS 124 Query: 310 QQHALTDNVAWEMFHHARRCLKINGELYIVANRH-LDYFHKLKKIFGNCTTIATNNKFVV 368 + + + +A A L+ G + +V + + + F + + + + Sbjct: 125 KGVDVLERLA----RDAPERLEKGGWVQMVLYKGEGNAVKIFSEYFPEVKVMKSVKGYSI 180 Query: 369 LKAV 372 + AV Sbjct: 181 VLAV 184 >UniRef50_A6DL01 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DL01_9BACT Length = 378 Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 63/353 (17%), Positives = 124/353 (35%), Gaps = 26/353 (7%) Query: 35 LLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSV 94 L+ L + + + + L P D + +EL + E + Sbjct: 38 FLKYLPNPLPEKTLFLYGADAPLMPAVLRALSPEMHIDVFTNELHDKRVAEKKYAPEHKI 97 Query: 95 KFLDSTA-DYPQQPGVVLIKVPKTLA--LLEQQLRALRKVVTSDTRIIAGAKARDIHTST 151 L + + +++ K L L L + T + + Sbjct: 98 NVLSGSDLQGDENYDMLVFAPTKYFDRMLFFDTLERLNLIYPKGTALYVVVPQERLKDFR 157 Query: 152 LELFE-----KVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHAN 206 ++ + K++ T + +K + + + + +D V+ ++T+ Sbjct: 158 KKIDQELKGVKIISSTRSNTVFK--TVTRGSDVKKKWSDRIANVAVSTMNAEFTMQTRPG 215 Query: 207 VFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAK------VVFVDE 260 VFS D G + + I+DLGCG G+IGL L + AK VV VD Sbjct: 216 VFSHGRADTGGVALSEAIDVIPGENILDLGCGAGLIGLALAKRQNDAKPDHGGSVVLVDS 275 Query: 261 SPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAW 320 + ++ + N+E N + CE + ++ F+ ++ NPP+ + Sbjct: 276 NIRSIECCKKNIEIN---GFENCEAIASDLYE--TEKTFDLIVGNPPYFAGQ----RIGE 326 Query: 321 EMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 A + L G L IV+ +H + ++ K FG TT + + + Sbjct: 327 YFIETAMKYLNKTGRLAIVS-KHGEQLAEVAKDFGFKTTTIKRKGYDISLCKR 378 >UniRef50_C7R3H0 Methyltransferase small n=2 Tax=Micrococcineae RepID=C7R3H0_JONDD Length = 225 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 80/211 (37%), Gaps = 22/211 (10%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGN 239 P D + + +L+G D + A VFS +D G ++ + G +VD+GCG Sbjct: 18 SPTSKDDTRVIPVRLDGRDVEVMTSAGVFSPGHIDTGTSVLLRTVGAPPSGTVVDVGCGW 77 Query: 240 GVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRF 299 G I LT+ +NP A+V VD + +VA + N + ++ + ++ E F Sbjct: 78 GPIALTMAMRNPDAQVWAVDVNERSVALTARNAQRLDLHCINAV--LASDIP---EDFVV 132 Query: 300 NAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY---FHKLKKIFGN 356 + + NPP + L+ G V RHL + F Sbjct: 133 DELWSNPPIRIGK----EALHALITQWLVRLRPGGRAVWVVQRHLGADSLMRWMNAQFAG 188 Query: 357 ----------CTTIATNNKFVVLKAVKLGRR 377 T A+ F VL+ V + + Sbjct: 189 EDRVTPGRYVTTKRASAKGFRVLETVHVAEQ 219 >UniRef50_A9BIP2 Methyltransferase small n=11 Tax=Thermotogaceae RepID=A9BIP2_PETMO Length = 225 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 12/184 (6%) Query: 195 EGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAK 254 G + + V+ + +D + ++ + E +++D+GCG GVIG++L + P Sbjct: 51 NGHKYLFKAPSGVYGKKRIDRASILLIEKV-ELTNEKVLDMGCGYGVIGISLKREFPDID 109 Query: 255 VVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHAL 314 + D + AV S + N N E F+ ++ NPP Sbjct: 110 LYMSDVNNRAVDFS----KINAKNNNVNAVIKQGNLFKPWEDDYFDVIVSNPPIVAGK-- 163 Query: 315 TDNVAWEMFHHARRCLKINGELYIVA--NRHLDYFHK-LKKIFGNCTTIATNNKFVVLKA 371 V E+ + L NG++Y+VA N+ +++IFGN + + F V + Sbjct: 164 --EVLHELIEESYHHLNENGKIYLVAYHNKGGKALESYMEQIFGNVKELEKSGGFRVYLS 221 Query: 372 VKLG 375 +K G Sbjct: 222 IKRG 225 >UniRef50_D0U5Y8 16S RNA G1207 methylase RsmC n=1 Tax=uncultured actinobacterium RepID=D0U5Y8_9ACTN Length = 225 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 15/200 (7%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLP-ENLEGEIVDLGC 237 +P A + + + G + + VF++ G+D G + + P + G +DLGC Sbjct: 33 TQPNSASDERFTRFVVGGRNLQLVTDRGVFAKKGVDQGTQILLDAAPRPSTTGNFLDLGC 92 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G+G I + L +P+AKV +D + A+ N + N L + ++S Sbjct: 93 GSGAIAMALASYSPEAKVWAIDVNARALQLVGENAQRN---GLGNITALFPQSVS--PDI 147 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK----LKKI 353 +F+ + NPP ++ L +G+ ++V NR+L + K Sbjct: 148 QFDLIWSNPPIRIGK----QALHDLLDTWLTRLSPSGQAWLVVNRNLGSDSLAVWMMSKG 203 Query: 354 FGNCTTIATNNKFVVLKAVK 373 F + + F VLK + Sbjct: 204 F-EVARLTSKRGFRVLKVTR 222 >UniRef50_B8I4M1 Methyltransferase small n=2 Tax=Bacteria RepID=B8I4M1_CLOCE Length = 196 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 7/183 (3%) Query: 185 DAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGL 244 A + + +++G VFS +D G + +++DLGCG GV+G+ Sbjct: 2 SAIRLIETEIKGIKMKFKTSGKVFSPQNIDRGTLAMLSLADFKEGDKVLDLGCGYGVVGI 61 Query: 245 TLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLC 304 V+ D A+ + N N ++D + + ++ ++ F+ +L Sbjct: 62 LASKIVGPENVIMTDVDENAIKLAIENALIN---SVDSIKILKSDGFKELKESGFSIILS 118 Query: 305 NPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNN 364 NPP+H +VA E L + G + +V R Y +KL IFG C + Sbjct: 119 NPPYH----TDFSVAKEFVEKGFNRLIVGGRMIMVTKRKDWYKNKLTSIFGGCKACEIDG 174 Query: 365 KFV 367 FV Sbjct: 175 YFV 177 >UniRef50_C0QWV8 Methyltransferase small domain protein n=2 Tax=Brachyspira RepID=C0QWV8_BRAHW Length = 213 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 7/184 (3%) Query: 190 VSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDK 249 + ++ D ++ +FS +DIG + + E +I+DLGCG GV+G+ Sbjct: 4 IEIAIKNIDLKFTSNDKLFSPKNIDIGTLSMINEINFEDENKILDLGCGYGVVGILAAKI 63 Query: 250 NPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFH 309 + KVV D AV S+ N N + + ++ L + F+ +L NPP+H Sbjct: 64 IGEDKVVMCDIDAEAVEISKHNAVLNN---VSNINIIQSDGLRNIIDNDFSMILSNPPYH 120 Query: 310 QQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVL 369 +VA L +NG+ +V R Y +KL +FG N ++ + Sbjct: 121 ----TDFSVAKHFIESGFYKLALNGKFVMVTKRLDWYKNKLSSVFGGVKVKEINGYYIFI 176 Query: 370 KAVK 373 + Sbjct: 177 SEKR 180 >UniRef50_Q6AE06 Putative uncharacterized protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6AE06_LEIXX Length = 203 Score = 153 bits (388), Expect = 8e-36, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 17/204 (8%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPE-NLEGEIVDLGC 237 P+ ++ + +L G + + + +FS +D+G R + H+P G+ +DLGC Sbjct: 10 PAPESETNLRSFTARLAGQTYELVTASGIFSPERIDMGTRVLLDHVPPAPPSGQFLDLGC 69 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCE-FMINNALSGVEP 296 G G + LTL ++P A V VD + A+ R N E + ++ + + L Sbjct: 70 GWGPLALTLALESPHATVWAVDVNTRALDVVRRNAEKLGLKNVNPVTPDRVPDGLE---- 125 Query: 297 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY---FHKLKKI 353 F + NPP + L+ ++V R+L ++ Sbjct: 126 --FTTIWSNPPIRVGKNELHTI----LKRWLPRLEPGSNAWLVVQRNLGSDSLHRWIEGA 179 Query: 354 FGNCTT--IATNNKFVVLKAVKLG 375 TT A + + VL+A + Sbjct: 180 LPELTTSRAAISKGYRVLRARRPS 203 >UniRef50_D1A2Z3 Methyltransferase small n=2 Tax=Streptosporangineae RepID=D1A2Z3_THECD Length = 228 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 13/195 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL-EGEIVDLGC 237 P+ A +TV L + VFS +D G R ++ +P EG+++D+GC Sbjct: 25 ERPEAAGRRRTVHLVLPDVHLRLTTDRGVFSPDRIDPGTRILLETVPAPPAEGDLLDVGC 84 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G G I L + ++P+A+V VD + A+ +RLN T + F + Sbjct: 85 GYGPIALAMALRSPRARVYGVDVNERALQLARLNARTA---GIGNASFHRPEQID--PAM 139 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY---FHKLKKIF 354 RF A+ NPP A E+ L Y+V ++HL L++ Sbjct: 140 RFAALWSNPPIRIGKAA----LHELLTTWLARLLPGATAYLVVHKHLGSDSLHRWLQQQG 195 Query: 355 GNCTTIATNNKFVVL 369 IA+ + + VL Sbjct: 196 WPTERIASRSAYRVL 210 >UniRef50_B7CDV5 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDV5_9FIRM Length = 194 Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 87/201 (43%), Gaps = 16/201 (7%) Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEI--VDL 235 F + DAP+ ++ + ++++A VFS+ LD G R ++ + +N + +DL Sbjct: 5 FTNDIVKDAPEEITIHFRDFTYKLNSNAGVFSKDKLDEGTRILLETVLDNQSEPVSCLDL 64 Query: 236 GCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE 295 GCG G I L L++ ++ +D + A + N++ +A C+ SG+ Sbjct: 65 GCGIGPIALILMEYWKYTEMTMIDVNQRACQLADSNMKKYRRKAKIICQ-------SGIN 117 Query: 296 PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK---LKK 352 ++ +L NPP A + + +F L +G +IV + L++ Sbjct: 118 EGQYACILLNPPIRTGKA----MIYSLFDQCMEHLATDGHFWIVMRKQHGAQSAINYLQE 173 Query: 353 IFGNCTTIATNNKFVVLKAVK 373 +A + + V+K + Sbjct: 174 KGYEVEKVARDKGYWVMKISR 194 >UniRef50_C0W0F2 Possible 16S rRNA methyltransferase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W0F2_9ACTO Length = 218 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 44/198 (22%), Positives = 76/198 (38%), Gaps = 8/198 (4%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL-EGEIVDLGCG 238 P T+ + L G D + VFS + LD G + ++ +PE G +D+GCG Sbjct: 25 PPATKAEMSTLEFSLRGFDLQMQVADQVFSASRLDPGTKVLLKEVPEPPASGRFLDVGCG 84 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 GVI L +P AK+ VD + A+ ++ N N ++ + E + Sbjct: 85 WGVISTLLGKFSPDAKIWAVDVNGRALDLTKRNANANGCTNVETYYAHEALEKARAEGLQ 144 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFH---KLKKIFG 355 F+ + NPP A T + L G +++ ++L L Sbjct: 145 FDLIWSNPPIRVGKAETHQI----LLDWLSLLADEGVAWLIVAKNLGADSLTTWLNDQGF 200 Query: 356 NCTTIATNNKFVVLKAVK 373 A+ F +L+ + Sbjct: 201 QAEKAASKKGFRLLRVTR 218 >UniRef50_B5GW92 Methyltransferase n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GW92_STRCL Length = 209 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 13/202 (6%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLP-ENLEGEIVDLGCG 238 +P +A P V +LE + + VFS + LD G + +++ P G+I+DLGCG Sbjct: 13 DPGVASRPGQVRVELEDVQLDLRTDSGVFSHSRLDPGTKVLLENAPLPRNRGDILDLGCG 72 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 G I LT + + +V VD + A+ R N ET + C + + + E R Sbjct: 73 YGPIALTFATRRKRLRVWAVDVNERALGLVRENAETARLGNVTAC---LPDEVP--EDVR 127 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL--DYFHKLKKIFG- 355 F + NPP A M L+ G Y+V +HL D K G Sbjct: 128 FGTIYSNPPIRIGKAE----MHAMLLRWLPLLQDGGTAYLVVQKHLGSDSLAKWLDAQGL 183 Query: 356 NCTTIATNNKFVVLKAVKLGRR 377 + ++ + +L+ K R Sbjct: 184 PAARLLSHRGYRLLEVQKSSDR 205 >UniRef50_A1SNI3 Methyltransferase small n=4 Tax=Actinomycetales RepID=A1SNI3_NOCSJ Length = 205 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 72/193 (37%), Gaps = 11/193 (5%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGN 239 +P + + + ++ G + T+ + + VFSR LD + ++G +DLGCG Sbjct: 10 DPSVPFEREPFTCEVWGRELTLVSGSGVFSRGHLDHATAVLFRETEPPVQGRFLDLGCGY 69 Query: 240 GVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRF 299 GVIGL + P A + +D + A+A + N + F+ + Sbjct: 70 GVIGLAIAAAVPLASITAIDVNDRAIALANENARAMRVDG----RFVACRPEQVPTNEVY 125 Query: 300 NAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY---FHKLKKIFGN 356 + + NPP E+ L G +V ++L L + Sbjct: 126 DEIWSNPPIRIGK----QALHELLLTWLPRLAPGGRAVMVVGKNLGADSLQRWLGEQGWP 181 Query: 357 CTTIATNNKFVVL 369 +A+ F VL Sbjct: 182 TERLASARGFRVL 194 >UniRef50_A9WGP8 Methyltransferase small n=5 Tax=Chloroflexaceae RepID=A9WGP8_CHLAA Length = 207 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 8/162 (4%) Query: 188 QTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPE--NLEGEIVDLGCGNGVIGLT 245 + +++ G + +FS +D G ++ + I+D+GCG GVIG+ Sbjct: 14 KRITYVWRGQQFAFDVAHTIFSSFQIDEGTDLLLRLIEPAFPEPQRILDVGCGCGVIGIC 73 Query: 246 LLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCN 305 L + PQA V VD+ +AV +R N E N A + + LS P ++ ++ N Sbjct: 74 LARRFPQADVTLVDKDLLAVRYARHNAELN---ATTNVTVLGSVGLSEAPPGPYDLIVSN 130 Query: 306 PPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF 347 P + E R L+ GE + V L++ Sbjct: 131 IPAKIG---DYAIEHEFILEPLRHLRPGGEYWFVVVSGLNHL 169 >UniRef50_Q47PA1 16S rRNA m(2)G 1207 methyltransferase n=1 Tax=Thermobifida fusca YX RepID=Q47PA1_THEFY Length = 205 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 80/204 (39%), Gaps = 15/204 (7%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLE-GEIVDLGC 237 ++P TV+ L + VFS +D+G R ++ +P + G ++DLGC Sbjct: 8 SDPTAPSRTATVTLLLPDLHLRLATDRGVFSPDRIDLGTRILLETVPPPPDHGTLLDLGC 67 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN----NALSG 293 G G I L + + P+A VV +D + A+A +R N E N A+ F + + Sbjct: 68 GYGPIALAMALRAPKATVVGIDTNQRALALARRNAEAN---AVPNVSFHRAPGPEDPVDP 124 Query: 294 VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY---FHKL 350 + F A+ NPP + L + V ++HL L Sbjct: 125 LLRGPFAALWSNPPIRIGK----QALHTLLTTWLDRLADGAYAHSVVHKHLGADSLHRWL 180 Query: 351 KKIFGNCTTIATNNKFVVLKAVKL 374 +A+ + +L+ ++ Sbjct: 181 DASGYPTDRVASRAGYRILRTMRR 204 >UniRef50_Q7UM12 Probable ribosomal RNA small subunit methyltransferase C n=1 Tax=Rhodopirellula baltica RepID=Q7UM12_RHOBA Length = 346 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 62/324 (19%), Positives = 119/324 (36%), Gaps = 17/324 (5%) Query: 31 ADEYLLQQLDDTEIR--GPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNG 88 +++ L+ L + ++++ G + ALA P S S+ +L E R Sbjct: 9 SEQLLIDHLASSTRSSLASAIVMSPGRGQAANALAAAFPNSKTTSWFVDLHRAERARE-- 66 Query: 89 IDESSVKFLDSTADYPQQPGVVLIKVPKT-LALLEQQL-RALRKVVTSDTRIIAGAKARD 146 + V + + L+ V KT A + + L + +T +IA + Sbjct: 67 VTSEDVHVICQPDLPDTTWELALLPVLKTGEAEMNRDLIHQSWQRLTIGGELIAAVNSPK 126 Query: 147 IHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQ--TVSWKLEGTDWTIHNH 204 +L + LGP R+ + + + +++ T+H+ Sbjct: 127 DTWLLNQL--QALGPKVRCHDHATGRVYSVRKSSVTFKPKNFDAEFTHRVDDRILTVHSR 184 Query: 205 ANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMA 264 +VFS +D A +++ P +++LGCGNG + + ++ VD + A Sbjct: 185 PSVFSHRSVDRAAAAMIRNAPIPEGSTVLELGCGNGAVAMAAAMRSKTGHAYAVDCNSRA 244 Query: 265 VASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFH 324 V + N + L N L V P + L NPP++ +A Sbjct: 245 VQCTERAAAQNQIKNLTAI-VNHNGELPNVPP--CDIALLNPPYYG----DFRIAEHFMV 297 Query: 325 HARRCLKINGELYIVANRHLDYFH 348 A + L+ GE Y++ + Y Sbjct: 298 TAAKKLRSGGEAYVITKQTDRYLE 321 >UniRef50_C5C9V8 16S rRNA m(2)G 1207 methyltransferase n=17 Tax=Actinobacteria (class) RepID=C5C9V8_MICLC Length = 211 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 76/207 (36%), Gaps = 20/207 (9%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL-EGEIVDLGCG 238 +P + +T+ +L G D + +FS GLD G +P G +D+G G Sbjct: 14 DPSAPERRRTLRTRLAGRDVEVQTANGIFSPDGLDKGTAALFSAVPAPPATGRFLDVGAG 73 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 G I LTL ++P+A+V V+ + ++ +R N + + G E Sbjct: 74 WGPIALTLALRSPEAEVTAVEVNDRSLQLTRDNAAALGLGNV--VALRPEDVPEGAE--- 128 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKL-------- 350 F+ + NPP + L GE ++V ++L L Sbjct: 129 FDLIWSNPPIRIGKPA----LHALLERWLPRLAPGGEAWLVVQKNLGADSLLPWIGRMLE 184 Query: 351 KKIFGN--CTTIATNNKFVVLKAVKLG 375 ++ G + F +L+ + Sbjct: 185 ERAPGRFTAERADSVKGFRILRVARAR 211 >UniRef50_D0WQY8 Putative methyltransferase small domain protein n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WQY8_9ACTO Length = 216 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 46/206 (22%), Positives = 71/206 (34%), Gaps = 15/206 (7%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEI---VDL 235 P +A L G ++ + VFS +D G + PE G +DL Sbjct: 9 QSPSSDEATVERLVSLRGREYAVATSGGVFSADHVDKGTAVLLHKAPEPDLGPGDLAIDL 68 Query: 236 GCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE 295 GCG G + L L ++ P A V VD + A+ +R N + + Sbjct: 69 GCGWGPLTLALCEEAPGADVWAVDVNERALELTRKNAARAGFSPKALAADEAL---AALG 125 Query: 296 PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK----LK 351 + + NPP A E+ L +G Y+V R+L L Sbjct: 126 ERKIQLIWSNPPVRIGKAR----LHELLTTWIERLADDGAAYLVIQRNLGADSLRSWMLG 181 Query: 352 KIFGNCTTIATNNKFVVLKAVKLGRR 377 + +G C I + F V + R Sbjct: 182 QGWG-CEKIGSAKGFRVFAVTRTPRE 206 >UniRef50_A4RYF4 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RYF4_OSTLU Length = 865 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 64/373 (17%), Positives = 127/373 (34%), Gaps = 46/373 (12%) Query: 30 AADEYLLQQLDDT--EIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLN 87 +AD L Q++ E+ VLI++D ++ L +S+ N + Sbjct: 513 SADALLAQEITAPFDELSARVLIVDDKHRLITKRL-RRVGWSVS-----------NWQRF 560 Query: 88 GIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDI 147 + + +++ P T A L L A+ V RI + Sbjct: 561 SCGDHG-TGTSWPETPDEFYAAAMVRAPPTKASLAMILHAVAANVRFGGRIWIYGGITEG 619 Query: 148 HTSTLELFEK-VLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTI----- 201 + K + T + K +++C + Q + + E + Sbjct: 620 IRGVIADLPKGLFERTRLVMHDDKYGVVHCVRSSAQPDKKGKELKKWREKKTLDLSDVMT 679 Query: 202 -------HNHANVFSRTGLDIGARFFMQ----HLPENLEGEIVDLGCGNGVIGLTLLDKN 250 + +F+ GLD+ ++ + + +++D G G I + K Sbjct: 680 TEHSVPWVAYPGLFAGGGLDVMTTLLLRSVLPTIERKSKLKVLDYCSGAGQIAAAVRAKA 739 Query: 251 PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE--PFRFNAVLCNPPF 308 ++++ +D A+ +++ N+ D EF++++ +E F+ +L NPP Sbjct: 740 KKSRLWLLDADACALEAAKRNL-------SDDVEFILSDGWRALEKSDRAFDLILSNPPV 792 Query: 309 HQQHALTDNVAWEMFHHARRCL-KINGELYIVANRHLDYFHKL----KKIFGNCTTIATN 363 H A+ E R L + +G Y VA R++ + Sbjct: 793 HLGLAVDFVPIREFLAGLARRLRRPDGIAYFVAQRYVPVRAIAAGTTADTLKITRQGTDD 852 Query: 364 NKFVVLKAVKLGR 376 KF V K V G Sbjct: 853 AKFAVWKCVARGA 865 >UniRef50_A9NEL6 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEL6_ACHLI Length = 197 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 13/200 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE-IVDLGC 237 N+P L T ++ +T + VFS+ LD G+ + +L + ++D+G Sbjct: 7 NDPNLISEETTYQVEMFDQKFTFLSDKGVFSKDHLDTGSYALIANLDIPTHAKSLLDVGS 66 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G GVIG+ L +P V +D + A+ N++ N ++ +N S V Sbjct: 67 GIGVIGIILKKVHPNLDVTQIDINTRALEL---NIKNNKLNQVE-TTVYESNLFSHV-DK 121 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK---LKKIF 354 F+ ++ NPP A + ++ A + L G+L+IV + L I+ Sbjct: 122 TFDCIVSNPPIRTGKAT----IYNLYKDAYKHLNTYGQLWIVVRKDQGAKSTIDYLSTIY 177 Query: 355 GNCTTIATNNKFVVLKAVKL 374 + + F V++A K Sbjct: 178 EEVELVKRHKGFYVIRAQKR 197 >UniRef50_UPI0000E87AD9 modification methylase, HemK family protein n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87AD9 Length = 283 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 109/291 (37%), Gaps = 48/291 (16%) Query: 123 QQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLIN---CTFN 179 + +R+ RK + + + ++ AR+ + + VL T+T L + + I+ Sbjct: 2 ESIRSYRKKIGIELQNLSTITAREAELEAQFILQFVLKETSTQLIIGRNKKISENDAGLI 61 Query: 180 EPQLADAPQTVSWKLEGTDWTIH------NHANVFSRTGLDIGARFFMQHLPENLEGEIV 233 E + +W + N + R ++ +Q+ E+ +I+ Sbjct: 62 ESIVKQRLLGTPLAYLFKEWDFYGRTYYINQQTLIPRQDTELMIDILIQNNKEDSSLKIL 121 Query: 234 DLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG 293 DLG G+GVIGLTL A++ D S A+ +++N L +F+ +N Sbjct: 122 DLGTGSGVIGLTLAHHFFNAQITLSDISSEAIKVAKIN---GGNSGLKNIQFVESNWFEK 178 Query: 294 VEPFRFNAVLCNPPF---------HQQHALTDNVA-----------WEMFHHARRCLKIN 333 + P +F+ ++ NPP+ H + +A ++ +A++ L Sbjct: 179 IPPGKFDVIVSNPPYIPKNDKHLKHPELLEQPQIALMSELGGLQAITDIVKNAKQYLNKA 238 Query: 334 GELYI---------VANRHLDYFHKLKKIFGNCTTIAT-NNKFVVLKAVKL 374 G L I V N F N N++ + VK+ Sbjct: 239 GLLMIEHGFDQAPTVKNIFT------ANTFNNVRQYQDINSRIRITSGVKI 283 >UniRef50_B7I872 Ribosomal RNA small subunit methyltransferase C n=6 Tax=Acinetobacter RepID=B7I872_ACIB5 Length = 126 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 2/126 (1%) Query: 246 LLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCN 305 + N + +D A+ S+ + N D+ ++ P +A++ N Sbjct: 1 MAKANSSNIIHALDIDAFALQSTEMTFSRNGI-GSDQLRLQPVTGIADA-PTELDAIVSN 58 Query: 306 PPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNK 365 PPFHQ + + + +A++ LK +GEL+IVANR L+Y ++K FG C Sbjct: 59 PPFHQGIHTNYDASEGLCQNAKKHLKASGELWIVANRFLNYPILIEKHFGQCEIKTDLQG 118 Query: 366 FVVLKA 371 F VL A Sbjct: 119 FKVLYA 124 >UniRef50_C4V130 Putative uncharacterized protein n=2 Tax=Selenomonas RepID=C4V130_9FIRM Length = 258 Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 17/152 (11%) Query: 219 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP- 277 + + HLP + G ++++GCG+G + + + P A V +D P + ETN Sbjct: 80 YLLDHLPWDGRGRVLEVGCGSGALSIAAAKRFPLAAVQGIDYWPPMWNYGQAQCETNAAA 139 Query: 278 -EALDRCEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGE 335 DRC F +A F+AV+ N FH+ D + A R LK G Sbjct: 140 EGVADRCTFQHGDAAKLDFPDNHFDAVVSNFVFHEVRTQKDKF--MLVEEALRVLKKGGA 197 Query: 336 LYIVANRHLDYFHKLKKIFGNCTTIATNNKFV 367 L +GN + ++FV Sbjct: 198 F------------ALHDTYGNKDMYGSMDEFV 217 >UniRef50_C7NJ77 16S rRNA m(2)G 1207 methyltransferase n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NJ77_KYTSD Length = 227 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 77/222 (34%), Gaps = 36/222 (16%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLP--ENLEGEI----- 232 P + ++ +L G + VFS LD F + +P E L Sbjct: 9 TPASPAEQREITVELAGERRRVVTAGGVFSAEHLDHATAFLLDAVPVPEALAARGEGVQL 68 Query: 233 VDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE----TNMPEALDRCEFMIN 288 +D+GCG G I L+L + PQA V + + A +R N + Sbjct: 69 LDIGCGWGPIALSLALQAPQATVWAAEVNERAADLARANAARLGVLAERPGAPGVHVVAP 128 Query: 289 NALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF- 347 + RF+ + NPP E+ H L+ +G ++V ++L Sbjct: 129 EEVPD--EARFDGIWSNPPIRVGK----EALHEILAHWLPRLRADGAAWLVVGKNLGAPS 182 Query: 348 --HKLKKIFGN----------------CTTIATNNKFVVLKA 371 + ++ GN C +A + F VL+A Sbjct: 183 LQRWIGELSGNFSPEASDGTLQVDSFTCDRVARHKGFWVLEA 224 >UniRef50_A6CDL7 Probable ribosomal RNA small subunit methyltransferase C n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CDL7_9PLAN Length = 364 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 67/360 (18%), Positives = 129/360 (35%), Gaps = 32/360 (8%) Query: 32 DEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYS-IGDSYISELATRENLR----- 85 ++ LL L L L+ AL + + D + + + ++ Sbjct: 19 EQLLLDFLPADWSSAQTLCFQSNLYPLTTALMKRVSETDRVDCFSFDKTIAQRIQHKCSL 78 Query: 86 -LNGIDESSVKFLDSTADYPQQ-PGVVLIKVPKTLALLEQQLRALR-----KVVTSDTRI 138 +++ V +++PQ VL+ P + ++ +R L + T T Sbjct: 79 LQEEQEQTPVWNTFCDSEFPQGDYESVLL--PLSEQFSDELVRELTLSAAYSLQTGGTLT 136 Query: 139 IAGAKARDI--HTSTLELFEKVLGPTTTTLAWKKARLINCTFNEP-QLADAPQTVSWKLE 195 IA ++ +D H LF KV T +A + +P Q S E Sbjct: 137 IASSRTKDYEYHKFLQTLFSKV-----TRIASDVGIVYQGKRQQPLPEKKCLQDESAMRE 191 Query: 196 GTDWTI-HNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAK 254 G + VFS + AR + + + E I++L CG+G++ + P ++ Sbjct: 192 GEKLLFAYTQPGVFSHRRPNQSARALINLMELSDESTILNLECGSGIVSFVAATRCPGSQ 251 Query: 255 VVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHAL 314 + +D + AV + + N L + G+ P ++ +L N + + Sbjct: 252 IHALDSNARAVKCTEQGIGKNQ---LANVSVKLAATDEGIMPESYDYLLTN----KSYFN 304 Query: 315 TDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKL 374 ++ R LK G L ++ Y H+L +F + + F+ L A K Sbjct: 305 SEEQGEAFLQMCLRALKPGGLLQFSTKQYQWYAHRLLDLFTDVAIDGAVHHFM-LSARKP 363 >UniRef50_C8P9J5 Protein-(Glutamine-N5) methyltransferase n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P9J5_9LACO Length = 290 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 27/168 (16%) Query: 218 RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP 277 + + LP + E ++DLG G+GVIG+TL + P V D SP A+A +R N + + Sbjct: 106 EWVLAALPADRELRVLDLGTGSGVIGITLALERPCWSVTLSDISPAALAVARENAQRHQL 165 Query: 278 EALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHAL----------TDNVA-------- 319 + ++ + + R++ ++ NPP+ A VA Sbjct: 166 ----ALPLVESDLFANLADQRYDVIVTNPPYIDPAATALMDQAVLENEPRVALFADEHGL 221 Query: 320 ---WEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNN 364 +F A R L+ +G+L+ D ++ + C A Sbjct: 222 GFYHRLFEQAGRHLRPSGQLF--GETGYDQEQSIQALLKRCDQQARMA 267 >UniRef50_C1E0X9 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E0X9_9CHLO Length = 1151 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 74/215 (34%), Gaps = 42/215 (19%) Query: 202 HNHANVFSRTGLDIGARFFMQHL---------------PENLEGE-----IVDLGCGNGV 241 + +F+ GLD+ F ++ + PE G+ +D G+G Sbjct: 890 VTYPGLFAGGGLDVMTAFLLETMTRSSDGWLGSALRGTPEGRGGKEGEFSALDFCSGSGT 949 Query: 242 IGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRC------------------ 283 + + P A++ +D +A+ ++R N+ + Sbjct: 950 LAACVRRLAPSARLTLLDADAVAMLAARENLSLPSGSSGASVLDSSEPDGSSPRSVHLPA 1009 Query: 284 EFMINNALSGVE-PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 342 F + + +G+ RF+ ++ NPP H V M LK GE + VA R Sbjct: 1010 AFALGDGWTGLSSDERFDLIVSNPPVHLGLRPEFTVLKSMCAGFDARLKPGGEAWFVAQR 1069 Query: 343 HLDYFHKLKKIFG---NCTTIATNNKFVVLKAVKL 374 ++ I G + N+KF V K Sbjct: 1070 YVPVAGICAGIGGLAAKVARVCANDKFAVWSVRKP 1104 >UniRef50_Q1II29 Modification methylase, HemK family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1II29_ACIBL Length = 280 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 26/143 (18%) Query: 218 RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP 277 ++ P + E++D+G G+G I TL + P+ KV VD SP A+ ++ N Sbjct: 102 EAVLELAPREVRWEVLDVGTGSGCIAATLAKEFPRMKVTAVDISPEALQIAQANAARLEA 161 Query: 278 EALDRCEFMINNALSGVEPFR-FNAVLCNPPFHQ---------------------QHALT 315 + EF +++ LS +EP R F+ ++ NPP+ Sbjct: 162 Q----VEFRVSDLLSAIEPGRQFDMIVSNPPYVGECEADKVQRQVKDFEPHCAVFGGERG 217 Query: 316 DNVAWEMFHHARRCLKINGELYI 338 ++ + LK G + Sbjct: 218 MDIIKRLAPQVWEHLKPGGWFLM 240 >UniRef50_C5RF40 Methyltransferase type 11 n=1 Tax=Clostridium cellulovorans 743B RepID=C5RF40_CLOCL Length = 253 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 23/164 (14%) Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEAL 280 + L +++DLG G G I TL +NP ++V +D A+ + N E + E L Sbjct: 38 INALKFQNSDKLMDLGTGTGYIAFTLAKENPNLQIVGLDIVTNAL---KANTEKAVKEQL 94 Query: 281 DRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV- 339 D F+ N ++ PF+ N C + H T+ + F R LK G+L+I Sbjct: 95 DNITFVEYNGMNI--PFQDNTFDCIVTRYAMHHFTE--IEKSFKEIYRVLKPGGQLFISD 150 Query: 340 -------ANRHLDYFHKLKKIFGNC--------TTIATNNKFVV 368 NR +D F KL K G+ T+A+ F + Sbjct: 151 PTPNERDENRFVDDFMKLSKDDGHIQFYKKEELETMASTAGFKI 194 >UniRef50_C1F2J0 Ribosomal protein L11 methyltransferase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F2J0_ACIC5 Length = 294 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 21/137 (15%) Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEAL 280 ++ LPE + D+G G+G I + L PQA V +D S A+ +R N + Sbjct: 119 LERLPEGETVRVADIGTGSGAIAIALAASRPQALVTALDLSEAALRIARENAAAHG--VA 176 Query: 281 DRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTD-------------------NVAWE 321 +R F+ ++ L+ V RF ++ NPP+ + +V Sbjct: 177 ERMRFLQSDLLAAVRGERFAMIVSNPPYVPGGEELEPQVRDFEPHSALFAGAEGLDVYRR 236 Query: 322 MFHHARRCLKINGELYI 338 + A L+ G L + Sbjct: 237 LIPEAAEVLEPGGWLLM 253 >UniRef50_D0MJN4 Modification methylase, HemK family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MJN4_RHOM4 Length = 304 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 52/270 (19%), Positives = 88/270 (32%), Gaps = 47/270 (17%) Query: 120 LLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTL---------AWKK 170 LL+Q ++ L D R + + +VLG + L A ++ Sbjct: 21 LLQQAIQRLEAAGVPDAR-----------RNAEWMLCEVLGCSRAQLYAYPERPVDAARR 69 Query: 171 ARLINCTFNEPQLADAP-QTVSWKLEGTDWTIHNHANVF-SRTGLDIGARFFMQHLPENL 228 AR +L P Q V +E + V R + +Q L Sbjct: 70 AR--FAELLARRLRREPLQYVLGYVEFLGLRLEVGPGVLVPRPETEWLTERVLQELQSTP 127 Query: 229 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN 288 ++D+G G+G I L + A V D SP A++ +R N E + ++ Sbjct: 128 GPRVLDVGTGSGCIALAIKHHRSDADVWACDISPEALSIARRNAERLGLQVHWVEADVLA 187 Query: 289 NALSGVEPFRFNAVLCNPPFHQQHALTDNVAW-----------------EMFHHARRC-- 329 ++ P F+ ++ NPP+ H + + R Sbjct: 188 DSFPENVPGPFDLIVSNPPYLALHEADELPPEVRDYEPPVALYAGEDPLRFYRALARHGH 247 Query: 330 --LKINGELYIVANRHLDYFHKLKKIFGNC 357 LK G L + H Y + +F C Sbjct: 248 VLLKPGGRLACEVHAH--YGTDVVALFEAC 275 >UniRef50_C3X2B7 Methyltransferase HemK MTase hemK n=2 Tax=Oxalobacter formigenes RepID=C3X2B7_OXAFO Length = 287 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 34/147 (23%), Positives = 53/147 (36%), Gaps = 28/147 (19%) Query: 217 ARFF----MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNV 272 + LPE G +VDLG G+G I + + P A+V D S A+ +R N Sbjct: 103 TELLVDLALARLPEG--GRVVDLGTGSGAIAVAIAAMRPDAQVWATDISGKALDIARKNA 160 Query: 273 ETNMPEALDRCEFMINNALSGVEPF-RFNAVLCNPPFHQ--------------------Q 311 + + F N +EP RF+ ++ NPP+ Sbjct: 161 -ASCLKNGQSVRFRQGNWYEALEPGSRFDLIVSNPPYIHSADEHLRKGDLRFEPLSALTD 219 Query: 312 HALTDNVAWEMFHHARRCLKINGELYI 338 + + + A LK GEL + Sbjct: 220 YTDGLSAMDILIDQAPAYLKKGGELLM 246 >UniRef50_B7KNT6 Methyltransferase small n=17 Tax=cellular organisms RepID=B7KNT6_METC4 Length = 341 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 20/144 (13%) Query: 217 ARFFMQHLPENLEG------EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRL 270 A + HL E D+GCG+G G+ + + P+A+VV VD +P A+ ++R+ Sbjct: 141 AEAVLAHLKERARAGHPAPRRAADIGCGSGAAGILVAKRLPEAEVVLVDINPAALRAARI 200 Query: 271 NVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPF----------HQQHALTDNVAW 320 N +D + ++ LS VE F+ ++ NPPF H L ++ Sbjct: 201 NAR---LAVVDNVRPVHSDMLSNVE-GSFDLIVSNPPFMVDSGGRAYRHGGGPLGAGLSL 256 Query: 321 EMFHHARRCLKINGELYIVANRHL 344 + A L G L + + Sbjct: 257 RVVEAATERLAPGGSLVLFTGSAI 280 >UniRef50_A6G0Z3 Modification methylase HemK n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G0Z3_9DELT Length = 259 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 65/184 (35%), Gaps = 31/184 (16%) Query: 188 QTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLL 247 + + G + + H VF G ++ L E ++D+GCG+G +G+ Sbjct: 45 EPTVATVAGVELEL--HPRVFRAAGAST-TLTLLEALGEPEGLRVLDMGCGSGAVGVIAA 101 Query: 248 DKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPP 307 + A V D SP AVA++R NV + E DRCE ++ + RF+ ++ N P Sbjct: 102 LRG-AASVHLADLSPDAVANARANVRRHGLE--DRCEVRCSDLFAAFSDERFDLIVFNVP 158 Query: 308 F-------------------------HQQHALTDNVAWEMFHHARRCLKINGELYIVANR 342 F + + A+ L G + Sbjct: 159 FLYAAENEATTALPIPAHLEGRLPPAQAFIDVEYRLIRAFISQAKTYLAPGGVIRCTFAN 218 Query: 343 HLDY 346 ++ Sbjct: 219 FGNH 222 >UniRef50_Q0AHU0 Modification methylase, HemK family protein n=5 Tax=Betaproteobacteria RepID=Q0AHU0_NITEC Length = 293 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 57/146 (39%), Gaps = 27/146 (18%) Query: 217 ARFF----MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNV 272 + +P + I+DLG G+G I +T+ P V VD SP+A+A +R N Sbjct: 107 TELLVEMALSKIPPDRCCNILDLGTGSGAIAITIARHRPDIYVTAVDLSPLALAVARRNA 166 Query: 273 ETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFH---------QQHALTDNVA---- 319 + +++ F+ + SG +F+ ++ NPP+ +A Sbjct: 167 KRC---SVENVVFIKADWFSGFISEKFDVIVANPPYIVEGDPHLEADGLRFEPTIALVAQ 223 Query: 320 -------WEMFHHARRCLKINGELYI 338 + A L+ +G L + Sbjct: 224 NNGLDCIRRIVDQAPDYLEHSGWLML 249 >UniRef50_B8KG51 Protein-(Glutamine-N5) methyltransferase, ribosomal protein L3-specific n=2 Tax=unclassified Gammaproteobacteria RepID=B8KG51_9GAMM Length = 321 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 22/128 (17%) Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 I+DL CG G IG+ P+ +VV D A++ +R N+ ++ R + ++ Sbjct: 147 RILDLCCGGGCIGIAAAVYQPELQVVLADIDADALSLARENIARYELQS--RVQVRQSDL 204 Query: 291 LSGVEPFRFNAVLCNPPFHQQHAL--------------------TDNVAWEMFHHARRCL 330 + + RF+ +LCNPP+ + L ++A + +A++ L Sbjct: 205 MDALGDERFDVILCNPPYVDANDLACMPAEYHCEPPRGLGSGEDGLDLARRILRNAQQHL 264 Query: 331 KINGELYI 338 G L++ Sbjct: 265 TPEGLLFL 272 >UniRef50_A5EWT8 Modification methylase, HemK family n=2 Tax=Cardiobacteriaceae RepID=A5EWT8_DICNV Length = 276 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 21/136 (15%) Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEAL 280 + +P ++DLG G+G I L + + P +V+ VD+S A+ ++ N L Sbjct: 102 LAKIPPQDCYRVIDLGTGSGAIALAIAAERPHCRVLAVDKSWDALRVAQENAR---HLQL 158 Query: 281 DRCEFMINNALSGVEPFRFNAVLCNPPFHQQH------------------ALTDNVAWEM 322 F++++ L+ + R + ++ NPP+ H + Sbjct: 159 ANVHFVLSDWLTAIADARADMIVSNPPYIDAHDEHLAALAYEPQMALVSPEHGYADLLHL 218 Query: 323 FHHARRCLKINGELYI 338 HA RCL+ NG L + Sbjct: 219 IAHAGRCLRPNGWLLL 234 >UniRef50_Q93NC8 Protoporphyrinogen oxidase HemK n=3 Tax=Myxococcales RepID=Q93NC8_MYXXA Length = 293 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 9/131 (6%) Query: 217 ARFFMQH----LPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNV 272 ++ LP++ G +DL G+G I ++L + PQA V+ D SP A A +R N Sbjct: 102 TELLVEAALRMLPKDAPGRALDLCTGSGCIAISLAAERPQATVIATDLSPDACALARENA 161 Query: 273 ETNMPEALDRCEFMINNALSGVE-PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLK 331 + DR + + + V RF V+ NPP+ + ++ E+ L Sbjct: 162 QA--LGVADRVTVLQGDLFTPVPAGERFQVVVSNPPYIASGEI-PGLSAEVRREPTLAL- 217 Query: 332 INGELYIVANR 342 G +VA R Sbjct: 218 DGGPDGLVAVR 228 >UniRef50_D1R4W7 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4W7_9CHLA Length = 285 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 37/174 (21%), Positives = 74/174 (42%), Gaps = 27/174 (15%) Query: 188 QTVSWKLEGTDWTIHNHANV-FSRTGLDIGARFFMQHL-PENLEGEIV-DLGCGNGVIGL 244 Q ++ ++E D + + V R +I A Q+L ++L G+++ D+ CG+G +G+ Sbjct: 72 QYITGQVEFYDCSFKVNPAVLIPRNETEILADLIAQNLRQQDLSGKVLWDVCCGSGCLGI 131 Query: 245 TLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLC 304 +L K PQ +V+ D S A+ ++ N N + EF+ + L + + + ++C Sbjct: 132 SLKKKFPQLRVILADISDKALQVAKENSFLNRVD----VEFVQGDFLQPFKGTQTDFLVC 187 Query: 305 NPPFHQ--------------------QHALTDNVAWEMFHHARRCLKINGELYI 338 NPP+ A + LK G++++ Sbjct: 188 NPPYIPESDWESLEDEVKYEPKEALLGGADGLQFYKRLMTELPFFLKPLGKVWL 241 >UniRef50_B0MTH4 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MTH4_9BACT Length = 282 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 29/139 (20%) Query: 225 PENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCE 284 P ++D+G G+G I +TL P A+V VD S A++ +R N E + Sbjct: 107 PAPDNPAVLDVGTGSGCIAVTLARLIPGARVTAVDISEKALSIARENARRLDAE----VD 162 Query: 285 FMINNALSGVEPF---RFNAVLCNPPFHQQHA--------LTDNVAWEMF---------- 323 F +AL + P +F+ ++ NPP+ + A +F Sbjct: 163 FRQGDALGELFPGQREQFDLIVSNPPYIPRREKASMRVNVTGYEPAEALFVEDDDPLIFY 222 Query: 324 ----HHARRCLKINGELYI 338 +ARR L+ G LY Sbjct: 223 RAIARNARRLLRPGGRLYF 241 >UniRef50_B3E629 Protein-(Glutamine-N5) methyltransferase, release factor-specific n=8 Tax=Geobacter RepID=B3E629_GEOLS Length = 286 Score = 99.6 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 26/142 (18%) Query: 219 FFMQHLPENLEGE-IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP 277 + + + ++D+G G+G I ++L + PQA + VD SP A++ +R N E N Sbjct: 107 LLEEAVRQAPTARTVLDIGTGSGCIAISLFHRLPQAAITAVDLSPDALSIARRNAERNNA 166 Query: 278 EALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTD--------------------- 316 + EF++ + V RF+ ++ NPP+ L D Sbjct: 167 Q----IEFLLGSFFQPVSERRFDLIVSNPPYITSADLADLQPEVRDFEPRLALDGGTDGL 222 Query: 317 NVAWEMFHHARRCLKINGELYI 338 + + A R L+ NG L + Sbjct: 223 DAYRVLAAEAPRYLEPNGWLLL 244 >UniRef50_Q1N3L9 Modification methylase, HemK family protein n=1 Tax=Bermanella marisrubri RepID=Q1N3L9_9GAMM Length = 281 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 6/105 (5%) Query: 217 ARFFMQHLPENLEGE-IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN 275 M ++ E+ + ++DLG G G + L + PQA VV VD AVA ++ N + N Sbjct: 98 TESLMDYIVEHFNPKNVLDLGTGTGALALATAKEYPQASVVAVDVIEEAVALAKENAKLN 157 Query: 276 MPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAW 320 + E + ++ + V RF+ ++ NPP+ + ++ Sbjct: 158 K---VTNVEILQSDWFALVPKRRFDLIVSNPPYIDAN--DHHLGE 197 >UniRef50_A3ZUD0 HemK protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZUD0_9PLAN Length = 294 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 53/135 (39%), Gaps = 24/135 (17%) Query: 226 ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEF 285 + I D+G G+G I +TL P+ +V +D S A+ ++ N E + ++ +F Sbjct: 119 KTETARICDVGAGSGCIAITLAKDLPKLQVTAIDISAAALQVAQQNAEEHG--VAEQIKF 176 Query: 286 MINNALSGVEPFR-FNAVLCNPPFHQQH---------------------ALTDNVAWEMF 323 + ++ L+ + F+ ++ NPP+ + E+ Sbjct: 177 VKSDLLTALPENAVFDLIVSNPPYIGLVEKPSLPKDVLQYEPHVALFSGEDGLDAIRELV 236 Query: 324 HHARRCLKINGELYI 338 A LK G L I Sbjct: 237 RQAPSHLKPGGWLLI 251 >UniRef50_D1Y1C6 Methyltransferase, UbiE/COQ5 family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y1C6_9BACT Length = 263 Score = 98.1 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 3/123 (2%) Query: 220 FMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEA 279 + HL +G ++D+GCG+G + + + P A+V+ VD S+ E N Sbjct: 84 LLDHLAWQGQGRLLDIGCGSGALSIRCARRFPGAQVIGVDYWSGVWDYSQKQCEENARLE 143 Query: 280 L--DRCEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGEL 336 R +F +A F+AV+ FH+ ++ + A R LK G Sbjct: 144 GCDGRIDFRHGDAARLEFADESFDAVVSCFVFHEVKTISGRSKRPVVEEALRVLKKGGSF 203 Query: 337 YIV 339 V Sbjct: 204 AFV 206 >UniRef50_A5EV99 Modification methylase, HemK family n=2 Tax=Cardiobacteriaceae RepID=A5EV99_DICNV Length = 300 Score = 98.1 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 25/146 (17%) Query: 213 LDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNV 272 +D G + + I+DL CG+G IG+ P A+VV D A+A + +N+ Sbjct: 112 IDRG---LAPYWQGDDPERILDLCCGSGCIGILAKYHYPDAEVVLADIDEQALAVAAINL 168 Query: 273 ETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTD---------------- 316 + E D E + ++ + V F+ +LCNPP+ + + Sbjct: 169 QRAAME-DDGVEIVQSDIFTAVT-GTFDWILCNPPYVEAEEMATIAAEYCHEPRQALVSG 226 Query: 317 ----NVAWEMFHHARRCLKINGELYI 338 ++ + A L NG L + Sbjct: 227 ADGLDLTRRILSQAAHYLNDNGVLIL 252 >UniRef50_B9XCI6 Protein-(Glutamine-N5) methyltransferase, release factor-specific n=1 Tax=bacterium Ellin514 RepID=B9XCI6_9BACT Length = 289 Score = 98.1 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 11/135 (8%) Query: 220 FMQHLPENLEGEI-VDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE 278 F+ LP + + +D G G+G + +T+ K+P A++ +D SP A+A+++ N T+ + Sbjct: 109 FLNSLPSSPTPPVALDYGTGSGCLAVTVAAKSPTAQLHALDISPDALATAQKNAATH--Q 166 Query: 279 ALDRCEFMINNALSGVEPF-RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELY 337 R +F + + + V P +FN ++ NPP+ + + E+ H R G Sbjct: 167 MGSRIQFHLGDGFAAVPPGLQFNLIISNPPYIASDEIA-TLQPEVRDHDPRLALDGGR-- 223 Query: 338 IVANRHLDYFHKLKK 352 LD++ +L K Sbjct: 224 ----DGLDFYRRLAK 234 >UniRef50_A1ATD2 Modification methylase, HemK family n=3 Tax=Bacteria RepID=A1ATD2_PELPD Length = 288 Score = 97.7 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 52/134 (38%), Gaps = 25/134 (18%) Query: 226 ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEF 285 L ++D+G G+G I ++L + P A++V D S +A+ +R N N + EF Sbjct: 114 APLARTVLDIGTGSGCIAVSLARRLPGARIVASDISAVALEMARANARANGVD----VEF 169 Query: 286 MINNALSGVEPFRFNAVLCNPPFHQ---------------------QHALTDNVAWEMFH 324 + + L V F+ ++ NPP+ ++ + Sbjct: 170 LHGSLLEPVAGRCFDLIVSNPPYIPSADIQLLEPEVRDGDPRLALDGGPDGLDIYRRLIP 229 Query: 325 HARRCLKINGELYI 338 + L+ G L + Sbjct: 230 ASLEHLEPGGWLLL 243 >UniRef50_Q9I347 Uncharacterized adenine-specific methylase PA1678 n=44 Tax=Gammaproteobacteria RepID=Y1678_PSEAE Length = 304 Score = 97.7 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 56/144 (38%), Gaps = 24/144 (16%) Query: 220 FMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEA 279 F LP I+DL G+G IG+ QA+VV D S A+ + +N+E + + Sbjct: 118 FAPWLPAEP-ARILDLCTGSGCIGIACAYAFEQAEVVLADLSFDALEVANVNIERH--DL 174 Query: 280 LDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTD--------------------NVA 319 +R + + +G+ RF+ ++ NPP+ D ++ Sbjct: 175 GERVYTVQGDGFAGLPGQRFDLIVSNPPYVDAEDFADMPAEFHHEPELGLACGDDGLDLV 234 Query: 320 WEMFHHARRCLKINGELYI-VANR 342 M A L G L + V N Sbjct: 235 RRMLAEAADHLSEKGLLIVEVGNS 258 >UniRef50_Q1J6M0 Peptide release factor-glutamine N5-methyltransferase n=12 Tax=Streptococcus pyogenes RepID=Q1J6M0_STRPF Length = 279 Score = 97.3 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 52/141 (36%), Gaps = 28/141 (19%) Query: 219 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE 278 ++L L ++D+G G+G I ++L + P +V D S A+ ++ N + + Sbjct: 102 ILAENLDAPL--NVLDIGTGSGAIAISLKKERPNWQVTASDISRAALDLAKANADAYQLD 159 Query: 279 ALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ---------------------QHALTDN 317 F+ ++ S + F+ ++ NPP+ Sbjct: 160 ----ITFIESDVFSLIS-GTFDIIVSNPPYISYEDKEEVSLNVLQSEPHLALFAKENGYA 214 Query: 318 VAWEMFHHARRCLKINGELYI 338 + ++ A L G+LY Sbjct: 215 IYRKIIEQADNYLTKEGKLYF 235 >UniRef50_A2SU41 Methyltransferase type 11 n=4 Tax=Euryarchaeota RepID=A2SU41_METLZ Length = 287 Score = 97.3 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 11/152 (7%) Query: 218 RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP 277 R F + LP I+D+GCG G + + + + P++ V +D +V S+LN E Sbjct: 130 RAFAEVLPLLSGKNILDVGCGLGTLAIKIAEAKPESLVYGIDLLESSVEQSKLNAE---V 186 Query: 278 EALDRCEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGEL 336 E + F++ N E F++V+C H D++ + +R LK +GE+ Sbjct: 187 EGVANTRFVVANTYELPFEEGYFDSVVCIFMLHH----LDDIPGAL-RDIKRVLKPSGEV 241 Query: 337 YIVANRHLDYFHKLKKIFGNCTTIATNNKFVV 368 + V +D+FH +++ + + + + V Sbjct: 242 FAV--EPIDHFHDVQRYPDDWKELFRDAGYEV 271 >UniRef50_Q9CNN7 Uncharacterized adenine-specific methylase PM0390 n=258 Tax=Proteobacteria RepID=Y390_PASMU Length = 338 Score = 96.9 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 62/144 (43%), Gaps = 24/144 (16%) Query: 220 FMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEA 279 F LP+ + I+D+ G+G I + ++ P+A+V VD S A+ +++N+E + Sbjct: 157 FAPLLPQEPK-RILDMCTGSGCIAIACAERFPEAEVDAVDLSSDALDVAQINIERHNM-- 213 Query: 280 LDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTD--------------------NVA 319 LDR + ++ + +++ ++ NPP+ L+D + Sbjct: 214 LDRVYPIQSDLFHDLAKDQYDLIVANPPYVDLEDLSDMPAEFHHEPEMALGSGVDGLEIT 273 Query: 320 WEMFHHARRCLKINGELYI-VANR 342 ++ + A L G L V N Sbjct: 274 KKILYAAPDYLTEQGVLVCEVGNS 297 >UniRef50_C6NTA1 Hypothetical adenine-specific methylase yfcB n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NTA1_9GAMM Length = 304 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 22/128 (17%) Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 I+++G G+G + + L + PQA V VD SP + + NV + E +R ++ Sbjct: 136 RILEIGTGSGCMAVALARQFPQASVDAVDISPQVLELAAQNVRRHGLE--ERIRLYTSDI 193 Query: 291 LSGVEPFRFNAVLCNPPFHQQHALTD--------------------NVAWEMFHHARRCL 330 S V P RF+ ++ NPP+ A+ D + + A L Sbjct: 194 FSAVGPARFDLIVSNPPYVDAAAMADLPPEYRHEPRLALAAGEDGLDCILPLLDQAPDHL 253 Query: 331 KINGELYI 338 G L + Sbjct: 254 LPGGALVV 261 >UniRef50_A4XUP5 Methyltransferase small n=18 Tax=cellular organisms RepID=A4XUP5_PSEMY Length = 322 Score = 96.5 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 51/134 (38%), Gaps = 16/134 (11%) Query: 217 ARFFMQHLPE--NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVET 274 R +HL I D+GCG G +T P A+V+ +D + A+A + +N Sbjct: 124 TRLLREHLTHCHQPLRRIADIGCGAGPGAITAAQLRPGAQVLALDINERALAMTAVNAR- 182 Query: 275 NMPEALDRCEFMINNALSGVEPFRFNAVLCNPPF----------HQQHALTDNVAWEMFH 324 + E ++ L V F+ ++ NPP+ H ++ +F Sbjct: 183 --LAGIFNLEVSKSDLLRDV-DGYFDLIIANPPYMLDPQQRTYRHGGGKHGAGLSLAIFD 239 Query: 325 HARRCLKINGELYI 338 A L G L + Sbjct: 240 TAMERLAPGGTLLL 253 >UniRef50_Q5WAJ4 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WAJ4_BACSK Length = 281 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 73/187 (39%), Gaps = 20/187 (10%) Query: 162 TTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIG---AR 218 T K+ + + E + D+ T SWKL+ + H R G+ G + Sbjct: 22 TGAVAGQDKSLFLRTVYYERKGGDSVSTTSWKLD----QVTEHYLKQVRGGIPYGADQTK 77 Query: 219 FFMQHLPENLEG--EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM 276 +Q + +++DLGCGNG + LL P+ + V VD S + N M Sbjct: 78 MMLQVISHFQSKPFQVLDLGCGNGFLAKLLLKTFPETRAVLVDHSKPML----HNAAQYM 133 Query: 277 PEALDRCEFMINNALSGV----EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKI 332 E +RC F+ + + EP + ++ + H L+ + +++ LK Sbjct: 134 AELQERCTFVEADLEDDISNFAEPESMDCIVSG---YAIHHLSHDRKKKLYAEIFNTLKP 190 Query: 333 NGELYIV 339 G V Sbjct: 191 GGVFVNV 197 >UniRef50_Q15SR0 Modification methylase, HemK family n=8 Tax=cellular organisms RepID=Q15SR0_PSEA6 Length = 298 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 16/111 (14%) Query: 217 ARFFMQ---HLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273 ++ +LP + ++DLG G G I L L + P +V+ +D+S AVA ++ N E Sbjct: 105 TELLVETVLNLPIAEDAHVLDLGTGTGAIALALASEKPNWQVLGIDKSADAVALAKQNAE 164 Query: 274 TNMPEALDRCEFMINNALSGVEPFR----------FNAVLCNPPFHQQHAL 314 N +L + FM ++ S +E + F+ ++ NPP+ + ++ Sbjct: 165 LN---SLPQVRFMQSDWFSALEQTQLDQQNNQHNVFSLIVSNPPYVEDDSV 212 >UniRef50_Q0HYK7 Modification methylase, HemK family n=17 Tax=Alteromonadales RepID=Q0HYK7_SHESR Length = 286 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 26/145 (17%) Query: 217 ARFFMQ---HLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273 ++ +LP +++DLG G G I L L + ++ VD+ AVA ++ N Sbjct: 100 TEILVETALNLPLESNAKVLDLGTGTGAIALALASERATWQITAVDKVEEAVALAKAN-R 158 Query: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPF--------HQQ----------HALT 315 TN+ L++ E + ++ S ++ F+ ++ NPP+ HQ A Sbjct: 159 TNLK--LEQVEILQSDWFSAIKAHDFDLIVSNPPYIDEADEHLHQGDVRFEPQSALTAAD 216 Query: 316 DNVA--WEMFHHARRCLKINGELYI 338 + A + + AR LK NG + + Sbjct: 217 EGFADLYYIAKTARDYLKPNGYILL 241 >UniRef50_C4DP23 Methylase of polypeptide chain release factors n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DP23_9ACTO Length = 378 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 39/168 (23%), Positives = 58/168 (34%), Gaps = 25/168 (14%) Query: 186 APQTVSWKLEGTDWTIHNHANVFSRTG---LDIGARFFMQHLPENLEGEIVDLGCGNGVI 242 Q +E IH VFS T +D + P + D+G G GV+ Sbjct: 159 QWQREGVWVEALGERIHPRYGVFSPTRDEYVD-----LVAAAPLPEGATVFDIGTGTGVL 213 Query: 243 GLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAV 302 L + A+VV D +P AV + N+ + DR E + + P R + V Sbjct: 214 AALLAKR--GARVVATDIAPRAVECAADNMTRLGLD--DRVEVVEADLF---PPGRADVV 266 Query: 303 LCNPPFHQQ----------HALTDNVAWEMFHHARRCLKINGELYIVA 340 LCNPP+ + L GE ++V Sbjct: 267 LCNPPWLPGTPNSTLDAAVFDHGGRMLSGFLDGVAAHLNPGGEAWLVI 314 >UniRef50_C6XB21 Methyltransferase small n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XB21_METSD Length = 331 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 14/118 (11%) Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 VD+G G+GV + L P A+V VD +P A+A +R+N N +R + + ++ Sbjct: 153 RAVDIGTGSGVGAIALAGLFPDAEVFGVDINPHALALARVNAAAN---GCERVQMLHSDL 209 Query: 291 LSGVEPFRFNAVLCNPPF----------HQQHALTDNVAWEMFHHARRCLKINGELYI 338 L V F+ ++ NPP+ H AL ++ M A L G L + Sbjct: 210 LRDVAGE-FDLIIANPPYLVDAAQRSYRHGGGALGAELSLSMVDAALTRLAPGGALVL 266 >UniRef50_B5EL90 Protein-(Glutamine-N5) methyltransferase, ribosomal protein L3-specific n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EL90_ACIF5 Length = 303 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 22/128 (17%) Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 I+++G G+G + +TL + P+A+V VD S A++ + N+ E DR ++ Sbjct: 137 RILEIGTGSGCMAITLALRFPEAEVDAVDISADALSVAHANIRRYGLE--DRVHLHQSDL 194 Query: 291 LSGVEPFRFNAVLCNPPF---HQQHALTDNVAWE-----------------MFHHARRCL 330 + +E R++ +L NPP+ LT E + A L Sbjct: 195 FAALEGRRYDLILSNPPYVDAIAMAELTPEYRHEPRLALAAGEDGLDCLLPLLEQAPHHL 254 Query: 331 KINGELYI 338 + G L + Sbjct: 255 EGGGVLVV 262 >UniRef50_D1YVR2 Putative methyltransferase n=1 Tax=Methanocella paludicola SANAE RepID=D1YVR2_METPS Length = 295 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 11/148 (7%) Query: 219 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP- 277 + +L N +G+++D+GCG+ + + L K P A++ VD + S+ E N Sbjct: 116 LVLANLAWNGQGKLLDIGCGSAALTIKLAKKYPNARLTGVDFWGHNWSYSKKICEKNAAA 175 Query: 278 -EALDRCEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGE 335 DR F +A+ E F+AV+ N FH+ D E+ A R LK G+ Sbjct: 176 EGVSDRVTFQKASAMKLPFEDETFDAVVSNLTFHEVRDAKDK--KELIREALRVLKKGGK 233 Query: 336 LYIVANRHLDYFHKLKKIFGNCTTIATN 363 D F +KK +G + Sbjct: 234 F-----TFQDLF-LVKKAYGTPEELVKT 255 >UniRef50_O27384 Methyltransferase related protein n=4 Tax=Methanobacteriaceae RepID=O27384_METTH Length = 196 Score = 95.4 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 50/153 (32%), Gaps = 23/153 (15%) Query: 217 ARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM 276 +L ++++G G G++ + +K V D +P AV ++ N N Sbjct: 24 TFLLADNLDVREGDRVLEIGTGTGLVAIRASEKG---DVTATDVNPAAVKCTQENAIING 80 Query: 277 PEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDN----------------VAW 320 E + + VE +F+ +L N P+ V Sbjct: 81 VE----LRVLQGDLFDPVEGEKFDVILFNTPYLPATGDDATGDVLDLAWNGGPDGRMVID 136 Query: 321 EMFHHARRCLKINGELYIVANRHLDYFHKLKKI 353 LK G + +V + D L+K+ Sbjct: 137 RFLDEVPAHLKPGGRVQLVQSSLSDTEKTLQKL 169 >UniRef50_A6G5N4 Probable ribosomal RNA small subunit methyltransferase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G5N4_9DELT Length = 364 Score = 95.4 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 88/318 (27%), Gaps = 41/318 (12%) Query: 85 RLNGIDESSVKFLDSTADYPQQPGVVLIKVPKT---LALLEQQLRALRKVVTSDTRIIAG 141 + LD+ V P+ E L + R+ Sbjct: 54 ARSRCVADVGPHLDAELGGSFAAAAV---WPRAHLGKDFSEACLARGALSLREGGRLYCA 110 Query: 142 AKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFN---EPQLADAPQTVSWKLEGTD 198 + S + + +LG + L + LA S+ ++ Sbjct: 111 VRKAKGGKSLGKTMKALLGSAQVEDRDRGYHLWVGERGPDFDEALARELVGRSYLVDDPL 170 Query: 199 WT---IHNHANVFSRTGLDIGARFFMQHLPE----------NLEGEIVDLGCGNGVIGLT 245 + + VFSR LD G R ++ ++DL G G + L Sbjct: 171 LPEGGLRSLPGVFSRRELDAGTRGLLEVAAVIAEQERAQGLAPPRRVLDLCAGIGPLALW 230 Query: 246 LLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR------- 298 + P A+V+ V+ S + A+ R + + + P Sbjct: 231 AAHRWPAAEVLAVE-SNLRAAALLEANAAAEGPGEPRVRVLAADGMPARRPASAVPELAR 289 Query: 299 -----FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKI 353 + L NPP H + R L G +V NR L+ Sbjct: 290 PFVGAVDWALINPPTHADPETLARLL-----DLRGWLSPKGSALLVVNRPGRAVECLQAA 344 Query: 354 FGNCTTIATNNKFVVLKA 371 G + + +L+A Sbjct: 345 -GATIEGGERDGYTILRA 361 >UniRef50_Q1GYE6 Modification methylase, HemK family n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYE6_METFK Length = 284 Score = 95.0 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 23/138 (16%) Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEAL 280 + +P EI+D+G G G IG+TL + PQAKV VD S A+A +R N Sbjct: 110 LDRIPVGQTCEILDMGTGTGAIGITLALERPQAKVTIVDYSEAALAIARENARQLSAH-- 167 Query: 281 DRCEFMINNALSGVEPFRFNAVLCNPPFHQQH--------------------ALTDNVAW 320 + ++ S + F+ ++ NPP+ + A + Sbjct: 168 -NVTALRSDWFSALGGRCFDLIVSNPPYIEAADPHLQQGDLRFEPIAALASGADGLDDIR 226 Query: 321 EMFHHARRCLKINGELYI 338 + A L NG L + Sbjct: 227 ILSAQAADHLITNGWLML 244 >UniRef50_D0KYC7 Protein-(Glutamine-N5) methyltransferase, ribosomal protein L3-specific n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KYC7_HALNC Length = 326 Score = 95.0 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 58/156 (37%), Gaps = 33/156 (21%) Query: 217 ARFFMQHLP-----ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLN 271 A QH + I+D+G G+G + + L P+A + D S A++ + N Sbjct: 134 AELIAQHFEPWYGTDTPPASILDIGTGSGCLAIALAQYFPEAMISACDISMDALSIAARN 193 Query: 272 VETNMPEALDRCEFMINNALSGVE-----PFRFNAVLCNPPFHQQHALTD---------- 316 V E DR E ++ L ++ P RF+ ++ NPP+ D Sbjct: 194 VRDYQLE--DRVELYQSDLLDNLKDETDAPLRFDLIISNPPYVDPAEAEDMPEEYHHEPA 251 Query: 317 ----------NVAWEMFHHARRCLKINGELYI-VAN 341 + M A L +G L++ V N Sbjct: 252 MALYAPNQGLALVERMLDTAGEHLSPDGYLFVEVGN 287 >UniRef50_C3YPG1 Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3YPG1_BRAFL Length = 287 Score = 95.0 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 76/214 (35%), Gaps = 50/214 (23%) Query: 188 QTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL---------PENLEGEIVDLGCG 238 Q + + + D + VF ++HL E E I+++GCG Sbjct: 71 QYILGEWDFRDLNLVMRPPVFIPR---PETEELVEHLWLYLQEDLSREEEELGILEVGCG 127 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP-EALDRCEFMI----NNALSG 293 +G I L+LL + PQA VD + AV ++ N E + L+ +F++ + Sbjct: 128 SGAISLSLLHEFPQAHCTAVDVTKEAVELTQHNAERLGLCDRLNIIKFIVLSLNDIVFPA 187 Query: 294 VEPFRFNAVLCNPPFH---------------------QQHALTDNVAWEMFHHARRCLKI 332 +F+ ++ NPP+ + ++ H + LK Sbjct: 188 DFETKFDVIVSNPPYIWTQDMGTLEQEIVGYENHCALHGGTDGMGLIRDIIHTGHKLLKP 247 Query: 333 NGELYIVA------------NRHLDYFHKLKKIF 354 G +++ N HL Y L ++ Sbjct: 248 GGSIWLEVDPRHPDMIQTYLNNHLQYQLHLAGVY 281 >UniRef50_B2KCR7 Methyltransferase type 11 n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KCR7_ELUMP Length = 261 Score = 95.0 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 5/119 (4%) Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP--E 278 + HL + G+++D+GCG+G + + + P AK+ +D ++ E N Sbjct: 85 LNHLNWDGNGKLLDVGCGSGAMVIKAAKRFPNAKITGMDYWGALWDYAKEQCENNAKIEG 144 Query: 279 ALDRCEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGEL 336 DR F +A F+AV+ N FH+ D VA + R +K G Sbjct: 145 VSDRVHFQKGDAAKLDFADAEFDAVVSNFVFHEVKTQPDKVA--LIKEVLRVIKPGGVF 201 >UniRef50_Q4UJU4 tRNA (guanine-N(7)-)-methyltransferase n=11 Tax=Rickettsia RepID=HEMK_RICFE Length = 527 Score = 94.6 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 23/129 (17%) Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 +I++LG G+G I ++LL + P A+VV D S A+ +R N DR + + +N Sbjct: 144 KILELGTGSGCIAISLLCELPNARVVATDISLDAIEVARNNALKY--HVTDRIQIIHSNW 201 Query: 291 LSGVEPFRFNAVLCNP-------------------PFHQQHALTDNV-AWEMFHH-ARRC 329 + +F+ ++ NP P+ A D + A+ + A++ Sbjct: 202 FENLGKQKFDVIVSNPPYISTDEKPEMALETLNHEPYIALFAEEDGLQAYRIIAENAKKF 261 Query: 330 LKINGELYI 338 LK NG++ + Sbjct: 262 LKPNGKIVL 270 >UniRef50_Q21AW1 Modification methylase, HemK family n=82 Tax=Proteobacteria RepID=Q21AW1_RHOPB Length = 367 Score = 94.6 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 55/141 (39%), Gaps = 23/141 (16%) Query: 225 PENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCE 284 PE +E ++DL G+G + + + P A++ VD SP A+ + N++ E DR Sbjct: 198 PEAVE-SVLDLCTGSGCLAVLASQRFPNARIDAVDASPDALEVAAENIDIYELE--DRVT 254 Query: 285 FMINNALSGVEPFRFNAVLCNPPFHQQHALTD--------------------NVAWEMFH 324 + + R++ ++ NPP+ + D ++ + Sbjct: 255 LYQGDLFKPLGDTRYDLIISNPPYVDAQGMADLPEECRAEPELAFFGGEDGLDIVRRILA 314 Query: 325 HARRCLKINGELYIVANRHLD 345 A++ L G L R D Sbjct: 315 EAKQHLTPTGGLLCEIGRGRD 335 >UniRef50_C0GGF2 Protein-(Glutamine-N5) methyltransferase, release factor-specific n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GGF2_9FIRM Length = 283 Score = 93.8 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 6/96 (6%) Query: 217 ARFFMQHLPENLEG----EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNV 272 F ++ + E L+ I+++G G+G + ++L P+A+VV VD S A+ ++ N Sbjct: 99 TEFLVEAVAEELQAHTSPRILEIGAGSGAVAVSLAKLLPKARVVAVDVSQAALEIAQKNA 158 Query: 273 ETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPF 308 + R EF+ + + V F+AV+ NPP+ Sbjct: 159 ARHGVAG--RVEFLAGDLYAPVADEYFDAVVSNPPY 192 >UniRef50_Q04KR3 HemK protein n=48 Tax=Streptococcus RepID=Q04KR3_STRP2 Length = 279 Score = 93.8 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 65/182 (35%), Gaps = 42/182 (23%) Query: 219 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE 278 ++L NL ++D+G G+G I L L P V D S A+ +R N + + Sbjct: 103 ILTENLETNLS--VLDIGTGSGAIALALAKNRPDWSVTAADISQEALDLARENAKNQNLQ 160 Query: 279 ALDRCEFMINNALSGVEPFRFNAVLCNPPF------------------HQQHALTDN--- 317 ++ + + +++ ++ NPP+ H ++ Sbjct: 161 IF----LKKSDCFTEISE-KYDIIVSNPPYISREDESEVGLNVLYSEPHLALFADEDGLA 215 Query: 318 VAWEMFHHARRCLKINGELYI------------VANRHLDYF--HKLKKIFGNCTTIATN 363 + + A LK +G++Y+ + +HL LK FG + + Sbjct: 216 IYRRIAEDATDYLKDSGKIYLEIGYKQGQCVPELFRKHLPEKRVRTLKDQFGQNRMVVVD 275 Query: 364 NK 365 + Sbjct: 276 DG 277 >UniRef50_Q58338 Uncharacterized protein MJ0928 n=12 Tax=Methanococcales RepID=Y928_METJA Length = 197 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 62/162 (38%), Gaps = 27/162 (16%) Query: 193 KLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQ 252 ++EG + H V+ D + +++L + +++++G G G+I + K + Sbjct: 4 EIEGIKLKL--HPEVYEPAE-D--SILLLKNLVDVKNKDVLEIGVGTGLISIACAKKGAK 58 Query: 253 AKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPF---- 308 K+V VD +P AV ++ N + N F ++ V +F+ +L NPP+ Sbjct: 59 -KIVGVDINPYAVKLAKENAKLNNV----NISFFESDLFENVT-GKFDVILFNPPYLPTS 112 Query: 309 ------------HQQHALTDNVAWEMFHHARRCLKINGELYI 338 + + LK G + I Sbjct: 113 EDEKIDSYLNFAFDGGKDGREILDRFIYELPNYLKKGGVVQI 154 >UniRef50_D1N6A4 Protein-(Glutamine-N5) methyltransferase, release factor-specific n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N6A4_9BACT Length = 282 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 51/147 (34%), Gaps = 31/147 (21%) Query: 217 ARFFMQ----HLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNV 272 + HLPE G ++DLG G+G I L + + P ++ VD S A+ +R N Sbjct: 98 TELLAEYAVKHLPEG--GSMLDLGTGSGAIALAVAAERPDVRITAVDVSSDALEVARRNR 155 Query: 273 ETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHA-----------------LT 315 E F+ ++ S + RF+ V N P+ Q Sbjct: 156 VRCGGE----VRFLQSDLFSELPGERFDLVGANLPYVTQEEYPALEPEVRLFEPQLALTA 211 Query: 316 DNVAWEMFHHARR----CLKINGELYI 338 + + + A R L G Sbjct: 212 PDGGFRLIERAARELADHLNPGGRAIF 238 >UniRef50_Q30X17 Modification methylase, HemK family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30X17_DESDG Length = 297 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 48/223 (21%), Positives = 80/223 (35%), Gaps = 24/223 (10%) Query: 126 RALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLAD 185 R +R +T+ + ++AG S L VL L ++ ++ E + A Sbjct: 10 RTIRDTLTAFSALLAGKAVDSPRLSAELLLAHVLRTDRLQLLVRRGHML----TEKEYAQ 65 Query: 186 APQTVSWKLEGTDWTIHNHANVF-------SRT----GLDIGARFFMQHL----PENLEG 230 A + + + EG + F S D + L P + Sbjct: 66 AEKLILRRAEGEPVAYLTGSREFYGREFAVSTDTLIPRPD--TELLIDTLKKEYPPHAAL 123 Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 DLG G+G I +++ + P A VD S A+ ++R N + DR F+ + Sbjct: 124 RFADLGTGSGCIAVSVAAEMPSAHGTAVDISSGALHTARENAARHR--VADRVAFVQADF 181 Query: 291 LSGV-EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKI 332 S + P F+ VL NPP+ H +R L Sbjct: 182 TSPLFRPASFDVVLSNPPYVSATEYETLSPEVRCHEPQRALVP 224 >UniRef50_D2EKA3 Putative uncharacterized protein n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EKA3_PEDAC Length = 285 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 66/164 (40%), Gaps = 32/164 (19%) Query: 217 ARFFMQHL----PE-NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLN 271 ++H+ P+ N ++D+G G+G I +TL + P +V VD + A+A ++ N Sbjct: 98 TEELVEHILNAHPQLNQSLRVLDIGTGSGNIAITLKLERPDWQVTAVDIASEALAVAQQN 157 Query: 272 VETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQH------------------- 312 + +F + V+ RF+ ++ NPP+ ++ Sbjct: 158 AH----QQEAVVDFRQGSLFDAVKGERFDIIVSNPPYIAENERDVMDQSVIEYEPDKALF 213 Query: 313 ALTDNVAW--EMFHHARRCLKINGELYIVANRHLDYFHKLKKIF 354 A D + W ++ L G+L+ H KLK+ F Sbjct: 214 APDDGLFWYKQIGRQLANHLTNAGQLWCEFGYHQG--AKLKQYF 255 >UniRef50_A5VIP7 Modification methylase, HemK family n=13 Tax=Lactobacillus RepID=A5VIP7_LACRD Length = 288 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 15/138 (10%) Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEAL 280 +Q +P +++DLG G+GVIG+TL + P V D SP A+A ++ N+ E Sbjct: 109 LQEMPSRPL-KVLDLGTGSGVIGITLALERPNWHVSLSDISPAALAVAQENMAKFNLE-- 165 Query: 281 DRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 340 + ++ + +++ ++ NPP+ + A L+ L + A Sbjct: 166 --LPLIKSDLFENI-DQQYDLIVTNPPYIDPDDTGE------IDQA--VLENEPALALFA 214 Query: 341 N-RHLDYFHKLKKIFGNC 357 N R L ++H+L K G Sbjct: 215 NERGLGFYHRLFKQAGQY 232 >UniRef50_Q0FGB0 HemK n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FGB0_9RHOB Length = 277 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 36/189 (19%) Query: 209 SRTGLDI--GARFFMQH-LPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAV 265 S LD ++H L + I+DLG G+G I L+LLD+ A V +D+S A+ Sbjct: 86 SPNVLDPRPDTETLIEHTLSQGKFYNILDLGTGSGCIILSLLDEYKDAIGVGIDKSEDAL 145 Query: 266 ASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHAL----------T 315 ++ N N+ R F + N G++ +F+ ++ NPP+ ++ + Sbjct: 146 NVAKQNA--NLLSLSQRVSFNLGNWCEGIKE-KFDLIISNPPYISENDMKILSKSVLNWE 202 Query: 316 DNVA-----------WEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNN 364 +A + A+ L NG+L + + Y T + N+ Sbjct: 203 PRIALTPEGDGLGAYRHILDGAKNLLIPNGKLIL----EIGY-----DQGKKVTHLLKNH 253 Query: 365 KFVVLKAVK 373 + +K VK Sbjct: 254 GYKDIKLVK 262 >UniRef50_A3EUN2 Modification methylase (HemK) n=2 Tax=Leptospirillum sp. Group II RepID=A3EUN2_9BACT Length = 293 Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 4/125 (3%) Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEAL 280 ++ L I+DLGCG+G++G++LL K P+A + VD S + + SR N L Sbjct: 115 LRILDSRSPERILDLGCGSGILGISLLKKFPKAHCLAVDRSVVPLEVSRKNALA--LGVL 172 Query: 281 DRCEFMINNALSGVE-PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 339 R F+ + + F+ ++ NPP+ L+ +F+ R L G +V Sbjct: 173 SRIHFVQGDWTEMLRLDQGFDLIVSNPPYIASGDLSGLDPEILFYEPREAL-DGGPDGLV 231 Query: 340 ANRHL 344 R L Sbjct: 232 FYRRL 236 >UniRef50_Q87DF7 Protein hemK homolog n=7 Tax=Xylella fastidiosa RepID=HEMK_XYLFT Length = 275 Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 23/138 (16%) Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEAL 280 +Q L E + DLG G+G I L + + PQA+V+ D S A+ + N + L Sbjct: 99 LQRLDHASERRVADLGTGSGAIALAIACERPQAQVLATDNSAAALDIAARNASAH---GL 155 Query: 281 DRCEFMINNALSGVEPFRFNAVLCNPPFHQQHAL--------------------TDNVAW 320 + F N + RF+ ++ NPP+ + Sbjct: 156 NHVVFREGNWYEALLGERFDLIVSNPPYIAVTDPHLTQGDLRFEPPSALISGGDGLDALR 215 Query: 321 EMFHHARRCLKINGELYI 338 + A L+ G L + Sbjct: 216 ILAAGAPAHLRPGGWLVL 233 >UniRef50_UPI0001AF32B2 N-methyl-transferase related protein n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF32B2 Length = 237 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 66/165 (40%), Gaps = 22/165 (13%) Query: 204 HANVFSRTGLDIG--ARFFMQHLPENLEGE-IVDLGCGNGVIGLTLLDKNPQAKVVFVDE 260 NV+ G + ++ L G ++DLGCG+G IG++L P +V D Sbjct: 55 PPNVYHPG---TGLSSSLLVEALSSENLGRAVLDLGCGSGYIGISL--YRPGMDLVLADI 109 Query: 261 SPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTD---- 316 S ++ SS N+ + ++ S ++ RF+ +L NPP + + Sbjct: 110 SKDSILSSTENLRRMEIPG----RVLESDLFSNLKGLRFDTILFNPPLLDKKIEHEAEIA 165 Query: 317 ------NVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG 355 ++ A + L G +Y +A+ ++ L + G Sbjct: 166 LCDPNGDLLTRFLTEAPQHLISTGCIYFIASNLMNREVLLNGLVG 210 >UniRef50_UPI00016C59E8 modification methylase, HemK family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C59E8 Length = 291 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 4/115 (3%) Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEAL 280 ++ L ++D+G G+G I ++L + + V D SP A+A ++ N N Sbjct: 113 LKRLKPLTAPAVLDIGTGSGCIAVSLAHQKKDSHVTATDVSPDALAVAKRNAIKN--NVA 170 Query: 281 DRCEFMINNALSGVEPF-RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKING 334 DR F+ + + + F+ V+ NPP+ Q + +A ++ H R G Sbjct: 171 DRMTFLQGDLFAPLPAGVTFDLVVSNPPYIAQSEFAE-LAPDVRDHEPRVALDGG 224 >UniRef50_Q04XZ4 Methylase of polypeptide chain release factors n=4 Tax=Leptospira RepID=Q04XZ4_LEPBL Length = 286 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 66/185 (35%), Gaps = 40/185 (21%) Query: 218 RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP 277 + + N E ++DL G+G IG++L + D S A+ ++ N + Sbjct: 107 KILLDFKGNNSEQNVLDLCTGSGCIGISLKSARKDWNITLSDISKDALEIAKKNAIQIIG 166 Query: 278 EALDRCEFMINNALSGVEPFR-FNAVLCNPPFHQQHALTD-------------------- 316 E + +F+ +N + F+ ++ NPP+ T+ Sbjct: 167 EG-NNIQFLESNLFLSIPKESEFDLIVTNPPYIPISDKTEMMKDVVDYEPHLALFLEDPK 225 Query: 317 NVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIF-----------GNCTT-IATNN 364 ++ AR LK G+ Y+ + + L F G ++ + Sbjct: 226 EFLSKLIEDARIHLKEGGKFYM------ETYPSLAWTFVSESTTNGWKEGKVEKDLSGKD 279 Query: 365 KFVVL 369 +FVVL Sbjct: 280 RFVVL 284 >UniRef50_C6QEV8 Modification methylase, HemK family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QEV8_9RHIZ Length = 315 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 46/129 (35%), Gaps = 22/129 (17%) Query: 230 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINN 289 G ++DL G+G I + + P A++ D S A+A + N+ + R + Sbjct: 136 GRVLDLCTGSGCIAILAAEAFPNAEIHASDISDDALAVAARNIRDYGLDQ--RVRTFKVD 193 Query: 290 ALSGVEPFRFNAVLCNPPF--------------------HQQHALTDNVAWEMFHHARRC 329 G+ ++ ++ NPP+ H ++ + A Sbjct: 194 LFDGLPAGSYDLIISNPPYVAAAEVEAFAPEYQAEPKLAHLGGVDGLDLVKRILDGAGER 253 Query: 330 LKINGELYI 338 L+ G L + Sbjct: 254 LEEQGNLIV 262 >UniRef50_A6GMB8 Modification methylase, HemK family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GMB8_9BURK Length = 307 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 10/114 (8%) Query: 226 ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEF 285 ENL ++D+GCG+G I ++L +NP +V D S A+ ++ N F Sbjct: 115 ENLLTRVLDIGCGSGAIAVSLALENPILEVTATDISADALWVAQFNANE---LGAKNIRF 171 Query: 286 MINNALSGV----EPFRFNAVLCNPPFHQQHALTDNVAWEMFH-HARRCLKING 334 + ++ + P F+ + NPP+ + ++++ ++ L G Sbjct: 172 LQSDLFENLLNQTPPLAFDLICSNPPYIELG--DEHLSQGDLRFEPQQALTDGG 223 >UniRef50_Q7NJS7 Protoporphyrinogen oxidase n=1 Tax=Gloeobacter violaceus RepID=Q7NJS7_GLOVI Length = 286 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 59/167 (35%), Gaps = 33/167 (19%) Query: 229 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN 288 +VDLG G+G I + + P A V VD S A+ + N+E ++ + Sbjct: 113 GARVVDLGTGSGAIAVAVARALPGATVWAVDASEAALVVAGANIERYGLS--EQVHLLRG 170 Query: 289 NALSGVEPFRFNAVLCNPPFHQ---------------------QHALTDNVAWEMFHHAR 327 N + F+AVL NPP+ + + ++ A Sbjct: 171 NWFVPLPTQPFDAVLSNPPYIPSAEIAALMPEVRLHEPLSALDGGSDGLDAVRQIIADAA 230 Query: 328 RCLKINGELYI-VANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 R L+ G L + V +A ++++ ++ V+ Sbjct: 231 RHLRPGGILALEVMAGQGPTV---------VQLLARDSRYGCIRTVR 268 >UniRef50_C0EX94 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EX94_9FIRM Length = 297 Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 58/159 (36%), Gaps = 29/159 (18%) Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 +++DL G+G IG+++ P +V D S A++ ++ N + + N Sbjct: 132 KVLDLCTGSGCIGISVAKLCPDTEVTLADISEGALSVAKKNAQNLDAG----VTLIKGNL 187 Query: 291 LSGVEPFRFNAVLCNPPFHQ---------------------QHALTDNVAWEMFHHARRC 329 +E RF+ +L NPP+ A + E+ + A Sbjct: 188 FENIE-GRFDYILSNPPYIPSEVIEGLMPEVKEHEPRLALDGEADGLSFYREIINEAPDY 246 Query: 330 LKINGELY--IVANRHLDYFHKL-KKIFGNCTTIATNNK 365 L +G +Y I A + D H + ++ F Sbjct: 247 LNPDGRIYFEIGAEQGEDLTHLMNERGFSEVKVHKDLAG 285 >UniRef50_Q2LWV0 Peptide release factor-glutamine N5-methyltransferase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LWV0_SYNAS Length = 316 Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 69/193 (35%), Gaps = 37/193 (19%) Query: 212 GLDIGARFFMQHLPENL-EGE-----IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAV 265 D ++ + + L G I+DLG G+G I + L + P A++ D S A+ Sbjct: 122 RPD--TEVLVEEVIKVLGSGRASRPEILDLGTGSGAIAVALAHECPHARITATDISRKAL 179 Query: 266 ASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ--------------- 310 A S N E + R F+ N L V +F+ ++ NPP+ Sbjct: 180 AVSAGNAERHG--VASRITFLEGNLLDPV-MGKFDVIVSNPPYIDSGDYARLSAEVRNFE 236 Query: 311 ------QHALTDNVAWEMFHHARRCLKINGELYI-VANRHLDYFHKLKKIFGNCTTIATN 363 + + A LK G L + + + + ++L + +A Sbjct: 237 PREALLAGEQGMDFYSAIIPQAACRLKPGGWLLLEIGDSQKENLNRLFQQSDAYQDLAFR 296 Query: 364 NKF----VVLKAV 372 + V+KA Sbjct: 297 KDYAGRWRVVKAK 309 >UniRef50_A8TJ19 Predicted O-methyltransferase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJ19_9PROT Length = 253 Score = 92.3 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 40/157 (25%), Positives = 59/157 (37%), Gaps = 21/157 (13%) Query: 219 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE 278 +P E ++DLGCG G + L LL + PQ VV V+ P +R NV N Sbjct: 38 LLAASVPVRAEQRVLDLGCGAGAVFLCLLARFPQLSVVAVERDPTMAGLARDNVARNG-- 95 Query: 279 ALDRCEFMINN---ALSGVEPFRFNAVLCNPPFHQQHALTDNV--------------AWE 321 +R + + + E F+ V+ NPPF + + Sbjct: 96 VAERATVVTADLSALPASWEMAAFDQVVTNPPFLPANRADPSPQPGRASAGVEATADLGV 155 Query: 322 MFHHARRCLKINGELYIV--ANRHLDYFHKLKKIFGN 356 A RCLK G + ++ +R D L FG Sbjct: 156 WIDRAHRCLKPKGRISVIHRVDRLDDLLAALAGRFGG 192 >UniRef50_C5JB08 Modification methylase, HemK family n=1 Tax=uncultured bacterium RepID=C5JB08_9BACT Length = 321 Score = 91.9 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 53/150 (35%), Gaps = 22/150 (14%) Query: 217 ARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM 276 + + G I+DLG G+G + +TL P A+V D P A+A + +N Sbjct: 126 SEGLALWMDPERLGRILDLGTGSGCLAITLALAYPGARVDGSDICPRALAVADINRRR-F 184 Query: 277 PEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ---------------QHAL-----TD 316 DR + ++ + ++ ++ NPP+ AL Sbjct: 185 RLGGDRLRLIRSDLFQNLPRECYDLIVANPPYVAPGEYASLPREYRHEPGRALRAGEGGL 244 Query: 317 NVAWEMFHHARRCLKINGELYI-VANRHLD 345 + + A L G L V +R + Sbjct: 245 ALVAAILRQAADHLAPGGWLICEVGDRGQE 274 >UniRef50_C3JBW4 SmtA protein n=2 Tax=Bacteria RepID=C3JBW4_9PORP Length = 256 Score = 91.9 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 15/123 (12%) Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 I+D+GCG G+I L L + P+A+V ++ P AV + N + + R + + Sbjct: 55 RILDVGCGTGLIALMLAQRYPRAEVTALEIEPTAVERATYNAAQSPFSS--RVRVVQADF 112 Query: 291 LSGVEPFR-FNAVLCNPPF------------HQQHALTDNVAWEMFHHARRCLKINGELY 337 + P ++ ++ NPP+ H A+ E+ A L G + Sbjct: 113 STWQAPQALYDLIVSNPPYYKNTLQARSEVRHTARAIGFLSPKEVLRRASALLSPQGVVA 172 Query: 338 IVA 340 +V Sbjct: 173 LVT 175 >UniRef50_Q470C2 Modification methylase HemK n=11 Tax=Burkholderiales RepID=Q470C2_RALEJ Length = 297 Score = 91.9 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 56/153 (36%), Gaps = 28/153 (18%) Query: 230 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINN 289 G +++L G+G + + P A++ VD SP A+A +R NV + DR + Sbjct: 130 GPVLELCTGSGCLPIIAAHVWPNAQIDAVDISPDALAVARRNVADYKMQ--DRIHLFEGD 187 Query: 290 ALSGVE-PFRFNAVLCNPPF--------------------HQQHALTDNVAWEMFHHARR 328 + + ++ +L NPP+ +V + A+ Sbjct: 188 LYAPLPAGATYDVILTNPPYVNESSMQALPPEYLAEPRVALAGGDDGMDVVRRIIAGAKA 247 Query: 329 CLKINGELYI-VANRHLDYFHKLKKIFGNCTTI 360 L G L + + N H ++ F N + Sbjct: 248 RLNPGGVLVVEIGNEH----ANVEAAFPNLEIV 276 >UniRef50_D1QW15 Methyltransferase domain protein n=2 Tax=Bacteria RepID=D1QW15_9BACT Length = 261 Score = 91.9 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 60/153 (39%), Gaps = 17/153 (11%) Query: 218 RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM- 276 +F + HL N +G ++D+GCG G + + P+A + +D M ++ E N Sbjct: 80 QFLIDHLNWNGQGTLLDIGCGAGALTNRCAKQFPEATLCGMDYWGMGWDYAKEQCERNAE 139 Query: 277 -PEALDRCEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKING 334 DR F +A F+AV+ N FH+ D ++ A R +K G Sbjct: 140 IEGVADRVTFSKGDASKLDFANESFDAVVSNFVFHEVKTQPDK--RKVVREALRVVKKGG 197 Query: 335 ELYIVANRHLDYFHKLKKIFGNCTTIATNNKFV 367 + +FG+ ++FV Sbjct: 198 AF------------AFQDLFGSKALYGDMDEFV 218 >UniRef50_C0W268 Putative uncharacterized protein n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W268_9ACTO Length = 509 Score = 91.5 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 53/141 (37%), Gaps = 22/141 (15%) Query: 216 GARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN 275 R +Q P + G ++DLG G G+IG+ +VV D S AV + N N Sbjct: 155 ATRTLLQATPRDQVGRVLDLGTGCGIIGMYAALHAD--EVVATDISARAVMLADFNAHLN 212 Query: 276 MPEALDRCEFMINNALSGVEPFRFNAVLCNPPF---------------HQQHALTDNVAW 320 + + + + ++ F+ +L NPPF D++ Sbjct: 213 EVK----MQVVQGSLFEPIK-GDFDLILSNPPFVITPDSLRETGILEYRDGGQTGDSLVA 267 Query: 321 EMFHHARRCLKINGELYIVAN 341 ++ A L+ G ++ N Sbjct: 268 QVVAGAAAHLREGGLSVMLGN 288 >UniRef50_D0KZK8 Protein-(Glutamine-N5) methyltransferase, release factor-specific n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZK8_HALNC Length = 286 Score = 91.5 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 83/238 (34%), Gaps = 20/238 (8%) Query: 121 LEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE 180 L + + R ++ D + ++ + L+ +++ + ARL + Sbjct: 9 LAELIDEARCLLGGDADAMVDIRSLVSQLAGLDRARQLMELERLLPSATAARLRSAFERR 68 Query: 181 PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG 240 +K + A + R + + ++ +P + DLG G+G Sbjct: 69 AAGEPVAYITGFKPFWRHEFLVTPATLIPRPETEHLLEWALEKIPPQQALTVADLGTGSG 128 Query: 241 VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFN 300 V+ ++L + PQ +V D S A+ +R N +A ++ + L +P + Sbjct: 129 VLAISLAIERPQIQVFGCDLSRDALLVARENESRLRADAALPIRWLQGSWLGMFKPESLD 188 Query: 301 AVLCNPPFH------------------QQHALTDNVA--WEMFHHARRCLKINGELYI 338 ++ NPP+ A + +A ++ A LK G + Sbjct: 189 VIVSNPPYIRPDDPHLAIGDLRFEPQSALVAQDEGMADYRQIIEQASTRLKPGGWILF 246 >UniRef50_Q0AC10 Modification methylase, HemK family n=8 Tax=Proteobacteria RepID=Q0AC10_ALHEH Length = 295 Score = 91.5 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 57/177 (32%), Gaps = 31/177 (17%) Query: 217 ARFFMQHLPENLEG----EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNV 272 ++ ++G + DLG G G I L L D+ P +V V+ S A+ +R N Sbjct: 112 TELLVEAALARVDGDRQLRVADLGTGTGAIALALADECPAWRVTAVEASAGALVVARENA 171 Query: 273 ETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVA------------- 319 DR + + + + RF+ V+ NPP+ H Sbjct: 172 RR--LGLADRVQVVAGSWFGPLAGERFDLVVSNPPYVGVHEPELYEGDVRFEPRSALAAG 229 Query: 320 -------WEMFHHARRCLKINGELYIVANRHLDYFHK----LKKIFGNCTTIATNNK 365 + A L G L +V + L+ FG T+ Sbjct: 230 RDGLGDLRRIVGEAPGHLVAGGWL-MVEHGFQQGEAVRRLFLEAGFGGVETLRDLAG 285 >UniRef50_C2KUL6 Polypeptide chain release factor methyltransferase n=1 Tax=Oribacterium sinus F0268 RepID=C2KUL6_9FIRM Length = 346 Score = 91.5 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 24/129 (18%) Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 I+DL G+G IG+++ P +++ VD S A+A ++ N E ++ + + ++ Sbjct: 180 NILDLCTGSGCIGISVAKHLPYQELLLVDLSEKALAVAKKNAEKHL---GENVRLLQSDL 236 Query: 291 LSGVEPFRFNAVLCNPPFHQQHAL----------TDNVA-----------WEMFHHARRC 329 L+ V+ +F+ +L NPP+ + +A + A++ Sbjct: 237 LTAVQGKKFSLLLSNPPYIVSRVIPGLEREVSEYEPKMALDGGEDGLLFYRRIAKEAKKV 296 Query: 330 LKINGELYI 338 L LY+ Sbjct: 297 LLPGARLYL 305 >UniRef50_Q5ZT28 Protein methyltransferase HemK n=6 Tax=Legionella RepID=Q5ZT28_LEGPH Length = 287 Score = 91.5 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 64/170 (37%), Gaps = 24/170 (14%) Query: 190 VSWKLEGTDWTIHNHANV-FSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLD 248 ++ + E ++ NV R + ++ +P+ ++DLG G+G I L L Sbjct: 73 ITGQREFWSLSLKVTPNVLIPRHETERLVELALELIPDKENVSVLDLGTGSGAIALALAK 132 Query: 249 KNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPF 308 + P + D S A+ +R N +T L+ F + + + +++A++ NPP+ Sbjct: 133 ERPLWHIDACDFSKEALELARYNAKT---LGLNNINFCHSYWFNNLPLKQYHAIVSNPPY 189 Query: 309 ---------HQQHALTDNVA-----------WEMFHHARRCLKINGELYI 338 H A + H+ L +G L + Sbjct: 190 IAENDPHLKHGDVRFEPTSALVSSQDGLADLQYIIQHSYEYLLPDGLLLV 239 >UniRef50_Q2MG72 Putative gentamicin methyltransferase n=2 Tax=Micromonospora RepID=Q2MG72_MICEC Length = 321 Score = 91.5 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 52/125 (41%), Gaps = 13/125 (10%) Query: 217 ARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM 276 A ++ + +D+GCG+GV+ L L D+ V+ VD +P AVA SRLN N Sbjct: 112 ADLLIRLMLRRGGARALDMGCGSGVLSLVLADRYE--SVLGVDVNPRAVALSRLNAALN- 168 Query: 277 PEALDRCEFMINNALSGVEPFRFNAVLCNPP-------FHQQHALTDNVAWEMFHHARRC 329 L F + E RF+ ++ N P F + + F + R Sbjct: 169 --GLTNVTFREGDMFEPAE-GRFSRIVFNSPTNEEGNEFVDLLEAGEPILETFFRNVPRK 225 Query: 330 LKING 334 L+ G Sbjct: 226 LESGG 230 >UniRef50_A4XJN0 Modification methylase, HemK family n=2 Tax=Clostridia RepID=A4XJN0_CALS8 Length = 289 Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 25/166 (15%) Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEAL 280 ++ +D+G G+G I + L KV+ VD S A+ + N + N Sbjct: 114 IELFNRKENLNFLDVGTGSGCIAIALCKFL-DCKVIAVDISENALRVAEKNAKLNG--VF 170 Query: 281 DRCEFMINNALSGVEPF-RFNAVLCNPPFHQQHAL---TDNVA----------------- 319 D+ F+ +N + P +F+A+ NPP+ ++ + V Sbjct: 171 DKIHFVKSNLFENIPPSLKFDAIFSNPPYISENEISMLDKRVLKEPKQALFSKENGLYYF 230 Query: 320 WEMFHHARRCLKINGELYI-VANRHLDYFHKLKKIFGNCTTIATNN 364 E+ +AR+ LK G + V R + K+ K G + N+ Sbjct: 231 QEIAKNARQYLKKGGYIIFEVGYRQSQHVKKILKDLGYVDIKSKND 276 >UniRef50_B9KCF8 Putative uncharacterized protein n=1 Tax=Campylobacter lari RM2100 RepID=B9KCF8_CAMLR Length = 230 Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 18/136 (13%) Query: 217 ARFFMQHLPE-NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN 275 + L + NL+G I+D+GCG G++GL + K P +KV +D + S N + N Sbjct: 17 SLLLFDFLSKYNLKGNILDIGCGCGILGLLIKQKFPNSKVYLLDIQEQNIKLSYKNAKEN 76 Query: 276 MPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDN-------------VAWEM 322 E CE + L+ +F+ ++ NPPF++++ +M Sbjct: 77 KLEIQGICE----DFLNYKSDIKFDFLISNPPFYKKNTQKSQDLHLCISRYQEFMPLEKM 132 Query: 323 FHHARRCLKINGELYI 338 +K NG ++ Sbjct: 133 LFKINSLIKPNGSFFM 148 >UniRef50_Q9KQ83 Uncharacterized adenine-specific methylase VC_2118 n=64 Tax=Proteobacteria RepID=Y2118_VIBCH Length = 314 Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 54/133 (40%), Gaps = 23/133 (17%) Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 I+DL G+G I + + P+A+V +D S A+ + N++ + E + + ++ Sbjct: 139 RIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALNVAEQNIQDHGLEQ--QVFPIRSDL 196 Query: 291 LSGVEPFRFNAVLCNPPFHQQHALTD--------------------NVAWEMFHHARRCL 330 + +++ ++ NPP+ Q + +A + +A L Sbjct: 197 FRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFRHEPELGLAAGSDGLKLARRILANAPLYL 256 Query: 331 KINGELYI-VANR 342 K NG L V N Sbjct: 257 KENGILVCEVGNS 269 >UniRef50_Q8TVA1 Predicted rRNA/ tRNA methylase n=1 Tax=Methanopyrus kandleri RepID=Q8TVA1_METKA Length = 196 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 61/177 (34%), Gaps = 26/177 (14%) Query: 217 ARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM 276 + +H + ++D+G G G+ GL+ K +VV D +P AV +R N N Sbjct: 29 SFLLAEHQGVSGSERVLDVGTGCGIQGLSAAAK--GCEVVATDVNPAAVHCARWNAHLND 86 Query: 277 PEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHAL-----------TDNVAWEMFHH 325 + + + V RF+ VL NPP+ L V Sbjct: 87 L----NIDVRVGDLFEPVRDERFDIVLFNPPYLPGRELPGSDPISRATEDPAVIRRFLKD 142 Query: 326 ARRCLKINGELYIVANRHLD--YFHKLKKIFGNCTTIATNNKF----VVLKAVKLGR 376 R E IV + Y L++ +A F VL A++ R Sbjct: 143 LLREEIRWDEARIVVSSLTPKKYLEPLQRF--EVEIVAEEPLFFEKIRVL-ALRPSR 196 >UniRef50_A9N9K3 Protein methyltransferase HemK n=6 Tax=Coxiella burnetii RepID=A9N9K3_COXBR Length = 277 Score = 90.8 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 53/139 (38%), Gaps = 21/139 (15%) Query: 218 RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP 277 + +++LP++ + I DLG G+G + L + + P + D S A+ + +N + + Sbjct: 102 EWILKNLPKDEKLRIADLGTGSGAVALAIAVERPHWTIDATDNSQAALKIAEINAKQHEI 161 Query: 278 EALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHAL------------------TDNVA 319 + C F + ++A++ NPP+ + Sbjct: 162 K---NCNFYHGEWCQALPRRDYHAIVGNPPYIPDKDQHLQQLKHEPREALAAGSDGLSAI 218 Query: 320 WEMFHHARRCLKINGELYI 338 + H A+ L G L + Sbjct: 219 KIIIHEAKSYLVNGGWLLL 237 >UniRef50_C6X4E9 Putative protoporphyrinogen oxidase n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X4E9_FLAB3 Length = 285 Score = 90.8 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 69/172 (40%), Gaps = 35/172 (20%) Query: 226 ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEF 285 +N +I+D+G G+G+I + L P A++ +D S A+ +R N + + F Sbjct: 117 KNQSLKILDIGTGSGIIPVVLKKHFPAAELSAIDYSEKALEVARKNADFHQV----NINF 172 Query: 286 MINNALSGVEPFRFNAVLCNPPFHQQHALTDNVA-----------------------WEM 322 + + L G F+ ++ NPP+ D ++ ++ Sbjct: 173 IHQDYLGGELNGIFDIIISNPPYI-GRDENDEISDSVKNFEPLMALFAPAENPLIFYEKI 231 Query: 323 FHHARRCLKINGELYIVANRHLDYFHK------LKKIFGNCTTIATNNKFVV 368 + + L G L++ N+ L + L ++ ++ N++FVV Sbjct: 232 ANDCKTHLSDGGMLFLEINQKLGSETRDLFTEVLHEV-RLVKDLSGNDRFVV 282 >UniRef50_C6XAY7 Modification methylase, HemK family n=18 Tax=cellular organisms RepID=C6XAY7_METSD Length = 297 Score = 90.8 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 29/147 (19%) Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEAL 280 + +P E++DLG G G I L + P+++V+ VD S A+ +R N E Sbjct: 110 LARIPSEDTREVLDLGTGTGAIALAIAAHRPKSRVIGVDASAAALQVARQNAEALGLAIT 169 Query: 281 D---------RCEFMINNALSGVEPFRFNAVLCNPPFH--------------------QQ 311 + EF + + + + +F+ ++ NPP+ Sbjct: 170 EPDTHGITKGNVEFRLGSWFTPLAGLKFDVIVSNPPYIRKDDPHLQQGDLRHEPFSALAS 229 Query: 312 HALTDNVAWEMFHHARRCLKINGELYI 338 A + + HA + +G L + Sbjct: 230 GADGLDDIRIIVQHAPAHFQPSGWLLL 256 >UniRef50_A9IMM0 Methylase n=5 Tax=Bartonella RepID=A9IMM0_BART1 Length = 288 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 61/148 (41%), Gaps = 20/148 (13%) Query: 212 GLDIGARFFMQHLPENLEGEI--------VDLGCGNGVIGLTLLDKNPQAKVVFVDESPM 263 D + + L+ ++ +D+G G+G I + +L + PQ+ V VD S Sbjct: 97 RPD--TETLIDLVLPFLKKQVKNSKKTTFLDMGTGSGAIAIAILKQIPQSYAVAVDISED 154 Query: 264 AVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMF 323 A+ ++ N + + + R ++++ V RF+ ++ NPP+ + + Sbjct: 155 ALKTATKNAK--NADVIHRFTPLLSDWFDSVTD-RFDFIVSNPPYIPEKDINKLAKEVRL 211 Query: 324 HHARRCLKINGELYIVANRHLDYFHKLK 351 H R L I LD++ KL Sbjct: 212 HDPLRAL-------IGGKDGLDFYRKLA 232 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_D2A808 Putative uncharacterized protein n=2 Tax=Enterob... 457 e-127 UniRef50_B2VDD5 Ribosomal RNA large subunit methyltransferase G ... 413 e-114 UniRef50_A1JR10 Ribosomal RNA large subunit methyltransferase G ... 397 e-109 UniRef50_Q3IHQ6 Ribosomal RNA large subunit methyltransferase G ... 389 e-106 UniRef50_A1SX22 Ribosomal RNA large subunit methyltransferase G ... 384 e-105 UniRef50_UPI0000E0E42F Putative ribosomal RNA small subunit meth... 377 e-103 UniRef50_Q6LTZ3 Ribosomal RNA large subunit methyltransferase G ... 374 e-102 UniRef50_Q1K1R5 RRNA (Guanine-N(2)-)-methyltransferase n=2 Tax=P... 371 e-101 UniRef50_Q15YR1 Ribosomal RNA large subunit methyltransferase G ... 368 e-100 UniRef50_D1XLW4 rRNA (Guanine-N(2)-)-methyltransferase n=5 Tax=S... 366 e-99 UniRef50_B0TR07 Ribosomal RNA large subunit methyltransferase G ... 359 1e-97 UniRef50_A4VI28 Ribosomal RNA large subunit methyltransferase G ... 357 4e-97 UniRef50_Q488Q3 Ribosomal RNA large subunit methyltransferase G ... 357 5e-97 UniRef50_Q4ZNG3 Ribosomal RNA large subunit methyltransferase G ... 352 1e-95 UniRef50_B1VMX8 Ribosomal RNA large subunit methyltransferase G ... 351 2e-95 UniRef50_A5F5X3 Ribosomal RNA large subunit methyltransferase G ... 346 9e-94 UniRef50_A0YBC4 Putative ribosomal RNA small subunit methyltrans... 341 4e-92 UniRef50_B4RZB4 Ribosomal RNA large subunit methyltransferase G ... 335 1e-90 UniRef50_B5JW57 Ribosomal ribonucleate guanine-2-methyltransfera... 329 8e-89 UniRef50_Q0VPK2 Ribosomal RNA large subunit methyltransferase G ... 323 6e-87 UniRef50_A0L9S5 Ribosomal RNA large subunit methyltransferase G ... 314 3e-84 UniRef50_Q1N4Z1 RRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=B... 306 1e-81 UniRef50_A1U203 Methyltransferase small n=2 Tax=Marinobacter Rep... 303 6e-81 UniRef50_A4BHH5 Putative uncharacterized protein n=1 Tax=Reineke... 301 3e-80 UniRef50_D2T448 Ribosomal RNA small subunit methyltransferase n=... 297 5e-79 UniRef50_Q7MZN0 Ribosomal RNA small subunit methyltransferase C ... 289 1e-76 UniRef50_Q65S65 Ribosomal RNA small subunit methyltransferase C ... 279 1e-73 UniRef50_Q15ZS7 Ribosomal RNA small subunit methyltransferase C ... 278 2e-73 UniRef50_A1SZ19 Ribosomal RNA small subunit methyltransferase C ... 277 5e-73 UniRef50_C6APC6 Ribosomal RNA small subunit methyltransferase C ... 276 1e-72 UniRef50_C4LB19 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=T... 276 1e-72 UniRef50_B7RVB2 Ribosomal protein L11 methyltransferase, putativ... 273 6e-72 UniRef50_Q2SJX3 Ribosomal RNA small subunit methyltransferase C ... 273 1e-71 UniRef50_B8H9N3 Methyltransferase small n=10 Tax=Actinomycetales... 272 1e-71 UniRef50_Q6FE96 Ribosomal RNA small subunit methyltransferase C ... 272 1e-71 UniRef50_C9NP08 Ribosomal RNA small subunit methyltransferase C ... 272 2e-71 UniRef50_D0SZB9 16S RNA methylase RsmC n=1 Tax=Acinetobacter lwo... 270 4e-71 UniRef50_C4K8X0 Ribosomal RNA small subunit methyltransferase C ... 269 9e-71 UniRef50_A7MUT5 Ribosomal RNA small subunit methyltransferase C ... 268 3e-70 UniRef50_Q2NW11 Ribosomal RNA small subunit methyltransferase C ... 265 1e-69 UniRef50_Q3ILJ2 Ribosomal RNA small subunit methyltransferase C ... 265 2e-69 UniRef50_A6FBK7 16S RNA G1207 methylase RsmC n=1 Tax=Moritella s... 262 1e-68 UniRef50_Q1MZV1 Ribosomal RNA small subunit methyltransferase C ... 261 3e-68 UniRef50_A3D8E4 Ribosomal RNA small subunit methyltransferase C ... 258 2e-67 UniRef50_A3J9J3 Nucleotide methyltransferase, putative n=1 Tax=M... 257 7e-67 UniRef50_Q0VP64 Ribosomal RNA small subunit methyltransferase C ... 256 1e-66 UniRef50_Q47VN0 Ribosomal RNA small subunit methyltransferase C ... 255 1e-66 UniRef50_B4S2L3 Ribosomal RNA small subunit methyltransferase C ... 253 8e-66 UniRef50_A3WQL8 16S RNA G1207 methylase RsmC n=1 Tax=Idiomarina ... 252 2e-65 UniRef50_A6VRG3 Ribosomal RNA small subunit methyltransferase C ... 251 3e-65 UniRef50_A0KPP9 Ribosomal RNA small subunit methyltransferase C ... 251 4e-65 UniRef50_A5VYJ3 Ribosomal RNA small subunit methyltransferase C ... 249 1e-64 UniRef50_Q5R049 Ribosomal RNA small subunit methyltransferase C ... 247 4e-64 UniRef50_C7R392 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=J... 247 6e-64 UniRef50_A9WVF5 16S rRNA m(2)G 966 methyltransferase n=1 Tax=Ren... 246 9e-64 UniRef50_Q3BNY2 Ribosomal RNA small subunit methyltransferase C ... 243 8e-63 UniRef50_Q1QUF2 Ribosomal RNA small subunit methyltransferase C ... 243 9e-63 UniRef50_B5JVE3 Ribosomal RNA small subunit methyltransferase C ... 240 6e-62 UniRef50_A4BC00 16S RNA G1207 methylase RsmC n=1 Tax=Reinekea bl... 240 8e-62 UniRef50_D1BFL3 16S rRNA m(2)G 1207 methyltransferase n=7 Tax=Ba... 239 1e-61 UniRef50_A1U204 Ribosomal RNA small subunit methyltransferase C ... 238 2e-61 UniRef50_UPI0000E105EB rRNA (guanine-N(2)-)-methyltransferase n=... 238 2e-61 UniRef50_D1YE28 Methyltransferase small domain protein n=3 Tax=P... 234 3e-60 UniRef50_C5CBM4 16S RNA G1207 methylase RsmC n=2 Tax=Micrococcus... 231 4e-59 UniRef50_B6AVZ4 Methyltransferase small n=1 Tax=Rhodobacterales ... 229 1e-58 UniRef50_A9B5U4 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=H... 223 8e-57 UniRef50_Q0C459 Putative methyltransferase n=1 Tax=Hyphomonas ne... 222 2e-56 UniRef50_C7LF42 Methyltransferase n=17 Tax=Brucella RepID=C7LF42... 221 4e-56 UniRef50_P57413 Ribosomal RNA small subunit methyltransferase C ... 218 2e-55 UniRef50_A0NLD9 Ribosomal RNA small subunit methyltransferase C ... 218 3e-55 UniRef50_A6WWW0 Methyltransferase small n=21 Tax=Brucellaceae Re... 214 3e-54 UniRef50_Q1YVK1 RsmC protein n=1 Tax=gamma proteobacterium HTCC2... 212 2e-53 UniRef50_C1ZEP1 16S RNA G1207 methylase RsmC n=1 Tax=Planctomyce... 211 4e-53 UniRef50_A8LQD1 Ribosomal RNA small subunit methyltransferase C ... 210 7e-53 UniRef50_Q1GDK1 Methyltransferase small n=13 Tax=Rhodobacteracea... 210 9e-53 UniRef50_C7MEY2 16S RNA G1207 methylase RsmC n=1 Tax=Brachybacte... 208 2e-52 UniRef50_A0LDZ4 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=M... 208 3e-52 UniRef50_A2BME9 Predicted Methyltransferase n=1 Tax=Hyperthermus... 207 5e-52 UniRef50_D1BX92 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=X... 207 5e-52 UniRef50_A0YF73 16S ribosomal RNA m2G1207 methyltransferase n=1 ... 207 7e-52 UniRef50_Q11BC2 Methyltransferase small n=2 Tax=Phyllobacteriace... 205 2e-51 UniRef50_C5BI28 RNA methyltransferase, RsmC family n=1 Tax=Tered... 204 5e-51 UniRef50_Q28KG1 Methyltransferase small n=1 Tax=Jannaschia sp. C... 203 1e-50 UniRef50_Q67JT6 Putative uncharacterized protein n=1 Tax=Symbiob... 203 1e-50 UniRef50_C6XLQ7 Methyltransferase small n=1 Tax=Hirschia baltica... 203 1e-50 UniRef50_C5QUQ6 16S rRNA methyltransferase n=3 Tax=Staphylococcu... 202 2e-50 UniRef50_C6ABL9 Ribosomal RNA small subunit methyltransferase C ... 202 2e-50 UniRef50_Q21JF1 16S rRNA m(2)G 1207 methyltransferase n=1 Tax=Sa... 201 4e-50 UniRef50_A6DL01 Putative uncharacterized protein n=1 Tax=Lentisp... 201 4e-50 UniRef50_A3JNU9 Methyltransferase, putative n=1 Tax=Rhodobactera... 200 5e-50 UniRef50_B3PHG8 Putative ribosomal RNA small subunit methyltrans... 200 6e-50 UniRef50_Q0FA32 Methyltransferase, putative n=1 Tax=Rhodobactera... 200 8e-50 UniRef50_Q2BHC0 Probable ribosomal RNA small subunit methyltrans... 197 5e-49 UniRef50_A3DJK4 Methyltransferase small n=3 Tax=Clostridium ther... 197 6e-49 UniRef50_A5IQ95 16S rRNA m(2)G 1207 methyltransferase n=53 Tax=S... 196 9e-49 UniRef50_Q1IXW7 rRNA (Guanine-N(2)-)-methyltransferase n=3 Tax=D... 196 1e-48 UniRef50_Q72L94 Ribosomal RNA small subunit methyltransferase C ... 195 2e-48 UniRef50_Q2W4E3 16S RNA G1207 methylase RsmC n=3 Tax=Magnetospir... 194 4e-48 UniRef50_C1A9K7 rRNA methyltransferase n=1 Tax=Gemmatimonas aura... 194 6e-48 UniRef50_A3V764 Methyltransferase, putative n=3 Tax=Rhodobactera... 193 8e-48 UniRef50_B5KCF3 Possible ribosomal RNA small subunit methyltrans... 193 1e-47 UniRef50_Q58292 Protein MJ0882 n=11 Tax=Methanococcales RepID=Y8... 192 2e-47 UniRef50_A1B2V8 Methyltransferase small n=8 Tax=Rhodobacterales ... 192 2e-47 UniRef50_B9Y2U0 Putative uncharacterized protein n=1 Tax=Holdema... 192 2e-47 UniRef50_A4WPY7 16S rRNA m(2)G 1207 methyltransferase n=5 Tax=Rh... 191 3e-47 UniRef50_Q8TXG5 16S rRNA G1207 methylase n=1 Tax=Methanopyrus ka... 190 6e-47 UniRef50_P37872 Uncharacterized protein ybxB n=163 Tax=cellular ... 190 6e-47 UniRef50_A8R9R0 Putative uncharacterized protein n=1 Tax=Eubacte... 190 8e-47 UniRef50_Q02YD3 16S RNA G1207 methylase RsmC n=110 Tax=Bacilli R... 189 2e-46 UniRef50_B6YSP9 Ribosomal RNA small subunit methyltransferase C ... 189 2e-46 UniRef50_Q89AI2 Ribosomal RNA small subunit methyltransferase C ... 188 2e-46 UniRef50_C0XSD5 Possible methyltransferase small n=1 Tax=Coryneb... 188 2e-46 UniRef50_D2R2V9 Methyltransferase small n=1 Tax=Pirellula staley... 188 3e-46 UniRef50_UPI000051043F putative methyltransferase n=1 Tax=Brevib... 185 2e-45 UniRef50_UPI00016C52FC methyltransferase small n=1 Tax=Gemmata o... 185 2e-45 UniRef50_D2MPQ8 Methyltransferase small domain protein n=1 Tax=B... 182 2e-44 UniRef50_C8NTY6 Methyltransferase small domain protein n=1 Tax=C... 181 3e-44 UniRef50_Q045V2 16S RNA G1207 methylase RsmC n=22 Tax=Bacilli Re... 181 3e-44 UniRef50_D2LVZ2 Methyltransferase small n=1 Tax=Bacillus cellulo... 181 3e-44 UniRef50_Q9V1A1 Ribosomal RNA small subunit methyltransferase C ... 181 4e-44 UniRef50_A9KTA1 Methyltransferase small n=3 Tax=Firmicutes RepID... 180 6e-44 UniRef50_A6UF35 Methyltransferase small n=17 Tax=Rhizobiales Rep... 180 1e-43 UniRef50_C5NY36 Methyltransferase small n=1 Tax=Gemella haemolys... 178 3e-43 UniRef50_A8A8U2 Methyltransferase small n=1 Tax=Ignicoccus hospi... 175 2e-42 UniRef50_Q057M1 Ribosomal RNA small subunit methyltransferase C ... 175 3e-42 UniRef50_B1MVU0 16S RNA G1207 methylase RsmC n=11 Tax=Lactobacil... 175 3e-42 UniRef50_C3RJV2 16S rRNA m(2)G 1207 methyltransferase n=4 Tax=Ba... 174 4e-42 UniRef50_B0UBH2 Methyltransferase small n=17 Tax=Alphaproteobact... 173 8e-42 UniRef50_C4FY86 Putative uncharacterized protein n=1 Tax=Catonel... 172 2e-41 UniRef50_A8F736 Methyltransferase small n=1 Tax=Thermotoga letti... 172 2e-41 UniRef50_D2RAI3 Methyltransferase small domain protein n=27 Tax=... 172 2e-41 UniRef50_A3K8H8 Methyltransferase, putative n=5 Tax=Rhodobactera... 170 7e-41 UniRef50_B8I811 Methyltransferase small n=2 Tax=Clostridium RepI... 169 1e-40 UniRef50_UPI0000382BBF COG2813: 16S RNA G1207 methylase RsmC n=1... 168 3e-40 UniRef50_B8D5U1 Ribosomal RNA small subunit methyltransferase C ... 168 3e-40 UniRef50_A6CDL7 Probable ribosomal RNA small subunit methyltrans... 168 4e-40 UniRef50_D0U5Y8 16S RNA G1207 methylase RsmC n=1 Tax=uncultured ... 167 5e-40 UniRef50_A3DND7 Methyltransferase small n=1 Tax=Staphylothermus ... 167 5e-40 UniRef50_C7NCQ1 Methyltransferase small n=5 Tax=Fusobacteriaceae... 166 2e-39 UniRef50_Q7UM12 Probable ribosomal RNA small subunit methyltrans... 166 2e-39 UniRef50_C2KPF6 Possible 16S rRNA methyltransferase n=4 Tax=Acti... 166 2e-39 UniRef50_A4RYF4 Predicted protein n=1 Tax=Ostreococcus lucimarin... 164 5e-39 UniRef50_A4YCT3 Methyltransferase small n=13 Tax=Sulfolobaceae R... 164 5e-39 UniRef50_D2PU49 Methyltransferase small n=2 Tax=Actinomycetales ... 164 6e-39 UniRef50_C1YW37 16S RNA G1207 methylase RsmC n=1 Tax=Nocardiopsi... 164 6e-39 UniRef50_C8WTY2 Methyltransferase small n=2 Tax=Alicyclobacillus... 163 9e-39 UniRef50_A1AW50 Methyltransferase small n=5 Tax=Gammaproteobacte... 163 1e-38 UniRef50_C7R3H0 Methyltransferase small n=2 Tax=Micrococcineae R... 163 1e-38 UniRef50_C8P1I9 Methyltransferase domain protein n=1 Tax=Erysipe... 162 2e-38 UniRef50_A9BIP2 Methyltransferase small n=11 Tax=Thermotogaceae ... 162 2e-38 UniRef50_C0W0F2 Possible 16S rRNA methyltransferase n=1 Tax=Acti... 162 2e-38 UniRef50_C7RA23 Methyltransferase small n=3 Tax=Gammaproteobacte... 162 2e-38 UniRef50_Q6AE06 Putative uncharacterized protein n=1 Tax=Leifson... 161 5e-38 UniRef50_A1SNI3 Methyltransferase small n=4 Tax=Actinomycetales ... 158 2e-37 UniRef50_C0QWV8 Methyltransferase small domain protein n=2 Tax=B... 158 2e-37 UniRef50_B8I4M1 Methyltransferase small n=2 Tax=Bacteria RepID=B... 155 4e-36 UniRef50_Q1II29 Modification methylase, HemK family n=1 Tax=Cand... 153 7e-36 UniRef50_D1A2Z3 Methyltransferase small n=2 Tax=Streptosporangin... 153 9e-36 UniRef50_Q47PA1 16S rRNA m(2)G 1207 methyltransferase n=1 Tax=Th... 153 1e-35 UniRef50_D0MJN4 Modification methylase, HemK family n=1 Tax=Rhod... 153 1e-35 UniRef50_B5GW92 Methyltransferase n=1 Tax=Streptomyces clavulige... 152 2e-35 UniRef50_A9WGP8 Methyltransferase small n=5 Tax=Chloroflexaceae ... 151 3e-35 UniRef50_A5WBH5 Methyltransferase small n=5 Tax=Gammaproteobacte... 151 3e-35 UniRef50_B3E629 Protein-(Glutamine-N5) methyltransferase, releas... 149 1e-34 UniRef50_A1ATD2 Modification methylase, HemK family n=3 Tax=Bact... 149 1e-34 UniRef50_Q2LWV0 Peptide release factor-glutamine N5-methyltransf... 149 2e-34 UniRef50_C1F2J0 Ribosomal protein L11 methyltransferase n=1 Tax=... 148 2e-34 UniRef50_Q0FKY0 Methyltransferase, putative n=1 Tax=Roseovarius ... 148 3e-34 UniRef50_Q93NC8 Protoporphyrinogen oxidase HemK n=3 Tax=Myxococc... 147 7e-34 UniRef50_Q1N3L9 Modification methylase, HemK family protein n=1 ... 146 9e-34 UniRef50_B8I1M7 Modification methylase, HemK family n=2 Tax=Clos... 146 1e-33 UniRef50_Q0AHU0 Modification methylase, HemK family protein n=5 ... 145 3e-33 UniRef50_C8P9J5 Protein-(Glutamine-N5) methyltransferase n=1 Tax... 144 5e-33 UniRef50_B7CDV5 Putative uncharacterized protein n=1 Tax=Eubacte... 144 6e-33 UniRef50_C5C9V8 16S rRNA m(2)G 1207 methyltransferase n=17 Tax=A... 143 7e-33 UniRef50_C3X2B7 Methyltransferase HemK MTase hemK n=2 Tax=Oxalob... 143 8e-33 UniRef50_UPI00016C046B modification methylase, HemK family prote... 143 1e-32 UniRef50_D0WQY8 Putative methyltransferase small domain protein ... 142 2e-32 UniRef50_Q1J6M0 Peptide release factor-glutamine N5-methyltransf... 141 3e-32 UniRef50_C3YPG1 Putative uncharacterized protein (Fragment) n=1 ... 139 1e-31 UniRef50_A1BHL4 Modification methylase, HemK family n=11 Tax=Chl... 139 1e-31 UniRef50_UPI0000E87AD9 modification methylase, HemK family prote... 139 2e-31 UniRef50_D0KZK8 Protein-(Glutamine-N5) methyltransferase, releas... 139 2e-31 UniRef50_B0MTH4 Putative uncharacterized protein n=1 Tax=Alistip... 138 2e-31 UniRef50_A3ZUD0 HemK protein n=1 Tax=Blastopirellula marina DSM ... 138 3e-31 UniRef50_B8FEA1 Modification methylase, HemK family n=1 Tax=Desu... 137 7e-31 UniRef50_Q5ZT28 Protein methyltransferase HemK n=6 Tax=Legionell... 137 7e-31 UniRef50_D2EKA3 Putative uncharacterized protein n=1 Tax=Pedioco... 137 8e-31 UniRef50_A6C399 HemK protein n=1 Tax=Planctomyces maris DSM 8797... 137 8e-31 UniRef50_B0K1F6 Modification methylase, HemK family n=10 Tax=The... 136 1e-30 UniRef50_B9XCI6 Protein-(Glutamine-N5) methyltransferase, releas... 136 1e-30 UniRef50_Q0FGB0 HemK n=1 Tax=Rhodobacterales bacterium HTCC2255 ... 136 1e-30 UniRef50_A7ADH3 Putative uncharacterized protein n=3 Tax=Bactero... 136 1e-30 UniRef50_C0EX94 Putative uncharacterized protein n=1 Tax=Eubacte... 136 1e-30 UniRef50_A5EWT8 Modification methylase, HemK family n=2 Tax=Card... 136 1e-30 UniRef50_B4U316 Methylase of polypeptide chain release factors n... 136 2e-30 UniRef50_C5EF50 Modification methylase n=1 Tax=Clostridiales bac... 135 2e-30 UniRef50_A9NEL6 Ribosomal RNA small subunit methyltransferase C ... 135 2e-30 UniRef50_A3EUN2 Modification methylase (HemK) n=2 Tax=Leptospiri... 135 3e-30 UniRef50_D1R4W7 Putative uncharacterized protein n=1 Tax=Parachl... 134 3e-30 UniRef50_Q9CNN7 Uncharacterized adenine-specific methylase PM039... 134 4e-30 UniRef50_Q031E0 Methylase of polypeptide chain release factor n=... 134 4e-30 UniRef50_Q7NJS7 Protoporphyrinogen oxidase n=1 Tax=Gloeobacter v... 134 5e-30 UniRef50_Q7VR73 Methylase of polypeptide chain release factors n... 134 5e-30 UniRef50_Q04KR3 HemK protein n=48 Tax=Streptococcus RepID=Q04KR3... 134 5e-30 UniRef50_A1WVR3 Modification methylase, HemK family n=1 Tax=Halo... 133 9e-30 UniRef50_A9N9K3 Protein methyltransferase HemK n=6 Tax=Coxiella ... 133 9e-30 UniRef50_Q2RFW1 Modification methylase, HemK family n=1 Tax=Moor... 133 1e-29 UniRef50_C5B815 Protein-(Glutamine-N5) methyltransferase, releas... 133 1e-29 UniRef50_A4XJN0 Modification methylase, HemK family n=2 Tax=Clos... 133 1e-29 UniRef50_C0WSS5 N5-glutamine S-adenosyl-L-methionine-dependent m... 132 2e-29 UniRef50_D1PU17 Protein-(Glutamine-N5) methyltransferase n=8 Tax... 132 2e-29 UniRef50_Q0AC10 Modification methylase, HemK family n=8 Tax=Prot... 132 2e-29 UniRef50_A5N3J8 Predicted methyltransferase n=13 Tax=Clostridium... 132 2e-29 UniRef50_A6G5N4 Probable ribosomal RNA small subunit methyltrans... 132 3e-29 UniRef50_B5EL90 Protein-(Glutamine-N5) methyltransferase, riboso... 131 3e-29 UniRef50_C9BMW7 Modification methylase HemK n=39 Tax=Lactobacill... 131 3e-29 UniRef50_A1ZCC3 Protoporphyrinogen oxidase n=1 Tax=Microscilla m... 131 3e-29 UniRef50_Q67TD4 Putative protoporphyrinogen oxidase n=1 Tax=Symb... 131 4e-29 UniRef50_C4G2U0 Putative uncharacterized protein n=1 Tax=Abiotro... 131 4e-29 UniRef50_Q5QUZ9 Protoporphyrinogen oxidase n=1 Tax=Idiomarina lo... 131 4e-29 UniRef50_UPI00016C59E8 modification methylase, HemK family prote... 131 4e-29 UniRef50_C6X4E9 Putative protoporphyrinogen oxidase n=1 Tax=Flav... 131 5e-29 UniRef50_A5TTN6 Polypeptide chain release factor methyltransfera... 131 5e-29 UniRef50_B8CZ26 Modification methylase, HemK family n=1 Tax=Halo... 131 5e-29 UniRef50_Q1K272 Modification methylase, HemK family n=1 Tax=Desu... 131 5e-29 UniRef50_UPI000185CC67 protein-(glutamine-N5) methyltransferase,... 130 7e-29 UniRef50_C6XAY7 Modification methylase, HemK family n=18 Tax=cel... 130 7e-29 UniRef50_C7RH19 Modification methylase, HemK family n=4 Tax=Anae... 130 8e-29 UniRef50_C2D8G1 Putative uncharacterized protein n=1 Tax=Atopobi... 130 8e-29 UniRef50_C6VIB1 Protoporphyrinogen oxidase (Putative) n=3 Tax=La... 130 9e-29 UniRef50_B1CAP0 Putative uncharacterized protein n=1 Tax=Anaerof... 130 9e-29 UniRef50_A4AH74 Methyltransferase n=1 Tax=marine actinobacterium... 130 1e-28 UniRef50_Q3JE27 Modification methylase HemK n=2 Tax=Nitrosococcu... 130 1e-28 UniRef50_C2M761 Protein-(Glutamine-N5) methyltransferase, releas... 130 1e-28 UniRef50_Q03EK2 Methylase of polypeptide chain release factor n=... 129 1e-28 UniRef50_Q04XZ4 Methylase of polypeptide chain release factors n... 129 1e-28 UniRef50_Q30X17 Modification methylase, HemK family n=1 Tax=Desu... 129 1e-28 UniRef50_D1N6A4 Protein-(Glutamine-N5) methyltransferase, releas... 129 1e-28 UniRef50_C6NTA1 Hypothetical adenine-specific methylase yfcB n=1... 129 1e-28 UniRef50_A9IMM0 Methylase n=5 Tax=Bartonella RepID=A9IMM0_BART1 129 2e-28 UniRef50_B3EU58 Modification methylase, HemK family n=1 Tax=Cand... 129 2e-28 UniRef50_C5JB08 Modification methylase, HemK family n=1 Tax=uncu... 129 2e-28 UniRef50_Q0HYK7 Modification methylase, HemK family n=17 Tax=Alt... 129 2e-28 UniRef50_Q1GYE6 Modification methylase, HemK family n=1 Tax=Meth... 129 2e-28 Sequences not found previously or not previously below threshold: UniRef50_Q97F67 S-adenosylmethionine-dependent methyltransferase... 131 3e-29 UniRef50_B0P066 Putative uncharacterized protein n=2 Tax=Clostri... 131 3e-29 UniRef50_B5YIQ8 HemK family protein n=1 Tax=Thermodesulfovibrio ... 131 4e-29 UniRef50_C4Z910 Predicted rRNA or tRNA methylase n=10 Tax=Bacter... 130 9e-29 UniRef50_B2KDQ0 Protein-(Glutamine-N5) methyltransferase, releas... 130 1e-28 >UniRef50_D2A808 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=D2A808_SHIF2 Length = 481 Score = 457 bits (1175), Expect = e-127, Method: Composition-based stats. Identities = 374/378 (98%), Positives = 375/378 (99%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSC 60 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEI GPVLILNDAFGALSC Sbjct: 104 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEILGPVLILNDAFGALSC 163 Query: 61 ALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL 120 ALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL Sbjct: 164 ALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL 223 Query: 121 LEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE 180 LEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE Sbjct: 224 LEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE 283 Query: 181 PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG 240 P LADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG Sbjct: 284 PPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG 343 Query: 241 VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFN 300 VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDR EFMINNALSGVEPFRFN Sbjct: 344 VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRSEFMINNALSGVEPFRFN 403 Query: 301 AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTI 360 AVLCNPPFHQQHALTDNVAWEMFH+ARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTI Sbjct: 404 AVLCNPPFHQQHALTDNVAWEMFHYARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTI 463 Query: 361 ATNNKFVVLKAVKLGRRR 378 ATNNKFVVLKAVKLGRRR Sbjct: 464 ATNNKFVVLKAVKLGRRR 481 >UniRef50_B2VDD5 Ribosomal RNA large subunit methyltransferase G n=6 Tax=Enterobacteriaceae RepID=RLMG_ERWT9 Length = 375 Score = 413 bits (1061), Expect = e-114, Method: Composition-based stats. Identities = 242/373 (64%), Positives = 298/373 (79%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSC 60 MS L+ R LTL RFP + +PLQAW+AADEYLL LD+ + GP LI ND FGAL+C Sbjct: 1 MSQLELSNRMLTLHRFPQMREESPLQAWDAADEYLLNHLDNLPVNGPTLIFNDTFGALAC 60 Query: 61 ALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL 120 ALA +SI DS++++ ATR+NL LN +DE V+ LDS A P P VLIKVPKTLAL Sbjct: 61 ALAGEGVWSISDSWLNQQATRQNLALNQLDEGDVRLLDSLAPLPGAPARVLIKVPKTLAL 120 Query: 121 LEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE 180 LE+QLRALR VVT +T+I+A KA++IHTSTL+LFEK+LGPTTT+LAWKKARLI TF + Sbjct: 121 LEKQLRALRAVVTPETQIVAAGKAKEIHTSTLQLFEKILGPTTTSLAWKKARLIYATFTQ 180 Query: 181 PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG 240 P+LA++ W L+GT W IHNHANVF+R GLDIGARFFMQHLP++++GEIVDLGCGNG Sbjct: 181 PELAESEVISRWPLDGTPWQIHNHANVFARGGLDIGARFFMQHLPDDIDGEIVDLGCGNG 240 Query: 241 VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFN 300 VIGL L +NP A+V F+DES MAVASSR+NVE N P+ L RCEF +NNAL+G R + Sbjct: 241 VIGLMALRQNPLAQVHFLDESYMAVASSRMNVELNCPDDLARCEFRVNNALAGYPSDRLH 300 Query: 301 AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTI 360 AVLCNPPFHQQ+A+TD++AW+MF ARRCL+ GEL IV NRHLDY+HK+KK+FGNCTT+ Sbjct: 301 AVLCNPPFHQQNAVTDHIAWQMFRDARRCLQYGGELRIVGNRHLDYYHKMKKLFGNCTTV 360 Query: 361 ATNNKFVVLKAVK 373 AT+ KFV+L++VK Sbjct: 361 ATHQKFVILRSVK 373 >UniRef50_A1JR10 Ribosomal RNA large subunit methyltransferase G n=143 Tax=Bacteria RepID=RLMG_YERE8 Length = 396 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 233/377 (61%), Positives = 291/377 (77%), Gaps = 2/377 (0%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRG-PVLILNDAFGALS 59 MS + G +S L+RFP ++ N LQAWEAADEYLLQ +D +I G PVL+ ND FG L+ Sbjct: 1 MSQVLLGTQSFELERFPPQENSNTLQAWEAADEYLLQNIDLNQIDGRPVLVFNDQFGTLT 60 Query: 60 CALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLA 119 CAL ++P+S+ DSY+S+LAT NLRLN +DE V L S P+ P +V+IK+PK LA Sbjct: 61 CALHAYRPFSVSDSYMSQLATAHNLRLNHLDEDVVTLLSSMDALPEAPKLVVIKIPKALA 120 Query: 120 LLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFN 179 LLE QLRALR+VV DT IIAGAK+RD+H STL+LFEK+LGPT TTLAWKKARLI+C Sbjct: 121 LLEHQLRALRRVVAPDTVIIAGAKSRDVHNSTLQLFEKILGPTKTTLAWKKARLIHCEVA 180 Query: 180 E-PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCG 238 + P +AP+TV W L T++ IHNHANVFSR LDIGARFFM+ LP ++EG+I DLGCG Sbjct: 181 DIPLAEEAPETVDWPLANTEYVIHNHANVFSRNNLDIGARFFMEILPYDVEGKIADLGCG 240 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 NGV+GL L++NP A+++FVDES MAVASS LN+ N P+ L RCEFM+++ L+GVE Sbjct: 241 NGVVGLIALEQNPLAEMLFVDESYMAVASSELNITYNRPQDLSRCEFMVSHGLAGVERES 300 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCT 358 VLCNPPFHQQHA++D+VAW+MF A+RCLK+ GEL IV NRHLDYFHKLK++FGNC Sbjct: 301 LQLVLCNPPFHQQHAVSDHVAWQMFCDAKRCLKVGGELMIVGNRHLDYFHKLKRLFGNCE 360 Query: 359 TIATNNKFVVLKAVKLG 375 T+ +N KF+VLKAVK Sbjct: 361 TLDSNQKFMVLKAVKTA 377 >UniRef50_Q3IHQ6 Ribosomal RNA large subunit methyltransferase G n=7 Tax=Gammaproteobacteria RepID=RLMG_PSEHT Length = 382 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 185/375 (49%), Positives = 241/375 (64%), Gaps = 5/375 (1%) Query: 3 HLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIR-GPVLILNDAFGALSCA 61 G ++ TL+RFP LQAW++ADEYL+ + + +LILND+FGALSC Sbjct: 4 QAQLGDKTFTLERFPLDQKNRSLQAWDSADEYLIDYVSEHHPDCRSLLILNDSFGALSCY 63 Query: 62 LA--EHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLA 119 + + S+ DSYIS A NL N I + LDS + P+Q +VLIKVP+TL Sbjct: 64 FSHKQLTVCSVNDSYISHQAAAYNLAENKIPAITFSQLDSLSALPEQVDLVLIKVPRTLG 123 Query: 120 LLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFN 179 L+ QL L +V+ T +IA AK +D+H ST++ FE+ +G T T+LA KK+RLI Sbjct: 124 FLQYQLSELSEVLAPGTPVIAAAKTKDVHNSTIKAFEQFIGETKTSLAVKKSRLIISHA- 182 Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE-IVDLGCG 238 + A V+W LEGTD+TI NHANVFSR LDIGARFF +LPE + + I+DLGCG Sbjct: 183 QGGYKAADFPVNWPLEGTDFTISNHANVFSRDSLDIGARFFFNYLPETNKAKSIIDLGCG 242 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 NGV+GL L + P A + FVDES MAV S+RLNVE NM ++C F+ N+ LSG E Sbjct: 243 NGVVGLMALSRCPNANITFVDESYMAVESARLNVELNMEAKYEQCSFVENDCLSGFERDS 302 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCT 358 + VLCNPPFHQ A+TD++AW+MF A+ LK GEL I+ NRHLDY KL ++FGNC Sbjct: 303 VDMVLCNPPFHQAQAVTDHIAWQMFKEAKDTLKEGGELRIIGNRHLDYHDKLNRMFGNCK 362 Query: 359 TIATNNKFVVLKAVK 373 + +N KFVVL A K Sbjct: 363 LLGSNKKFVVLSATK 377 >UniRef50_A1SX22 Ribosomal RNA large subunit methyltransferase G n=3 Tax=Alteromonadales RepID=RLMG_PSYIN Length = 382 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 165/379 (43%), Positives = 246/379 (64%), Gaps = 8/379 (2%) Query: 4 LDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGP------VLILNDAFGA 57 L+ ++L L R P + LQAW++ADEYL+ + E++ +L++ND+FGA Sbjct: 5 LNIADQTLVLHRHPRIKN-ETLQAWDSADEYLINYFSENELQKQLNENEQILLVNDSFGA 63 Query: 58 LSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKT 117 L+C L + + DSY+S + + N++ N E ++ DS +P+ +VLIK+PKT Sbjct: 64 LTCYLQAFQRTVVSDSYLSINSIKLNMQRNRCPEENLLLQDSLQQFPENVKIVLIKIPKT 123 Query: 118 LALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCT 177 L+ LE+ L+ L V+T +T ++A K IH STL+LFEK +G T T+LA KK+RLI Sbjct: 124 LSYLEEMLQKLHAVITPETIVVAAGKVNMIHNSTLDLFEKYIGTTKTSLAKKKSRLIFSL 183 Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGC 237 ++ + ++W++E DW IHNHANVFSR LDIG RF M +LP+ ++VDLGC Sbjct: 184 PIIKEVPEKEIAITWEIEKLDWKIHNHANVFSRNHLDIGGRFLMDNLPKGDFSKVVDLGC 243 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP-EALDRCEFMINNALSGVEP 296 GNG+IG+ P+A++ F+DES M++ S+R+N++ N+P E + F++NN L G +P Sbjct: 244 GNGIIGMAASAAYPKAQITFIDESYMSIDSARINMQKNLPEEQAENARFVVNNGLVGFKP 303 Query: 297 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGN 356 ++ +LCNPPFHQQ +TD +AW MF+ A CL NGEL IV N HL+Y KL++IFGN Sbjct: 304 RSYDLILCNPPFHQQQTITDQIAWSMFNDAHFCLVDNGELVIVGNHHLNYQDKLERIFGN 363 Query: 357 CTTIATNNKFVVLKAVKLG 375 C ++ N KFV+L+AVK+ Sbjct: 364 CEIVSQNKKFVILRAVKMD 382 >UniRef50_UPI0000E0E42F Putative ribosomal RNA small subunit methyltransferase D (rRNA (guanine-N(2)-)-methyltransferase) (16S rRNA m2G966 n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0E42F Length = 388 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 167/385 (43%), Positives = 228/385 (59%), Gaps = 8/385 (2%) Query: 2 SHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLD-------DTEIRGPVLILNDA 54 + + + TL R+PA LQAW+A DEY++ + D + ILND Sbjct: 3 TEFTHARGTHTLVRYPAEHQHKSLQAWDAVDEYIISYVQANYTDLLDNITPQRMAILNDD 62 Query: 55 FGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKV 114 FGAL+CA KP I DS++++L R NL+ N +D +S++F+ ST Q +VL+++ Sbjct: 63 FGALTCAFQACKPVHISDSFVAQLGARHNLQQNDLDSASIEFIASTDKLSQTFDIVLMQL 122 Query: 115 PKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLI 174 PK LALL QL LR DT IIAG K + + +LF +LG T+LA KK+RL+ Sbjct: 123 PKNLALLTYQLHQLRDCTHPDTIIIAGGKVPVVTKNVQQLFNTILGDCHTSLAAKKSRLV 182 Query: 175 NCTFNEPQLADAPQTV-SWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIV 233 + N +W++ + + NVFSR LDIGARF MQHLP +V Sbjct: 183 IGSVNNALTPPPLTPWNTWEITKPVLQLSHLPNVFSRLHLDIGARFLMQHLPLIEGEHVV 242 Query: 234 DLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG 293 DLGCGNGVIG T+L P AKV FVDES MA+ S++ NV+ N PE +C+F++ N LS Sbjct: 243 DLGCGNGVIGCTVLADAPNAKVTFVDESYMAIESAKRNVQDNFPEQYAQCDFVVANCLSQ 302 Query: 294 VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKI 353 V+ + VLCNPPFHQQ+A+TD++AW+MF A++ L+ GEL I+ NRHL Y + LKK Sbjct: 303 VDLEHVDLVLCNPPFHQQNAVTDHIAWQMFKDAKQVLRHGGELRIIGNRHLPYGNMLKKR 362 Query: 354 FGNCTTIATNNKFVVLKAVKLGRRR 378 +G T IATN KF +L K R Sbjct: 363 YGGFTVIATNAKFSILSTYKSDASR 387 >UniRef50_Q6LTZ3 Ribosomal RNA large subunit methyltransferase G n=2 Tax=Photobacterium profundum RepID=RLMG_PHOPR Length = 374 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 167/376 (44%), Positives = 233/376 (61%), Gaps = 8/376 (2%) Query: 2 SHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTE--IRGPVLILNDAFGALS 59 L R+L L RFP + LQAW+AADEYL+ D E + P+LILND+FGALS Sbjct: 3 PALTLHDRTLKLNRFPIRK-IETLQAWDAADEYLINHTHDMELDPQRPILILNDSFGALS 61 Query: 60 CALAEHK-PYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTL 118 C AE ++ DS++++ NL N + SV +D A+ P+ P +VLIK+PK Sbjct: 62 CWFAERANVTTVTDSFVAKQGCIANLTANQL--PSVNIIDCLAELPKNPQLVLIKLPKNN 119 Query: 119 ALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTF 178 LL QL+ L ++ D R+I AK +DIHTSTL+L +K LG T T+LA KKARL+ Sbjct: 120 RLLTWQLQQLCHLLPEDCRVIGAAKVKDIHTSTLKLCDKYLGETKTSLAVKKARLVFIKP 179 Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE-IVDLGC 237 N P+ +W + + NHANVFS LDIGAR + H+P++ + + I+DLGC Sbjct: 180 NASLAKPMPEAKAWDVPEHGIRLSNHANVFSGESLDIGARLLLNHIPQDFKYKDIIDLGC 239 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 GNGVIG+ +NPQAK+ VDES MA AS N + N EA ++ ++ + L+ +E Sbjct: 240 GNGVIGIKAARRNPQAKITCVDESFMAAASCTENAKQN-LEAPEQLTAIVTDCLADIEHS 298 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNC 357 + VLCNPPFHQQ +TD++AW+MF A++ L+ GEL ++ NR L Y KLK++FGN Sbjct: 299 SADLVLCNPPFHQQTTITDHIAWQMFCDAKQVLRPKGELIVIGNRQLGYDDKLKRLFGNV 358 Query: 358 TTIATNNKFVVLKAVK 373 IA N+KF+V ++VK Sbjct: 359 EIIAQNDKFIVYQSVK 374 >UniRef50_Q1K1R5 RRNA (Guanine-N(2)-)-methyltransferase n=2 Tax=Proteobacteria RepID=Q1K1R5_DESAC Length = 375 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 153/377 (40%), Positives = 227/377 (60%), Gaps = 7/377 (1%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGP---VLILNDAFGA 57 MS + L R+P ++ +PL+AW+AADE++L +L D + P +LI+ND+FGA Sbjct: 1 MSQISVPQGQWDLYRYPVRNN-DPLRAWDAADEFILNELHDQSLPQPSQRLLIVNDSFGA 59 Query: 58 LSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKT 117 LSC L ++P + DS ++ NL+ N I + + F DS P +VLIKVPK+ Sbjct: 60 LSCCLHPYEPTLVSDSCLTYHGLLHNLKSNRIAQDCITFFDSLTTPPGHYDIVLIKVPKS 119 Query: 118 LALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCT 177 LALLE QL LR V+ ++ II A + + S +ELFEK+LGPT T+LA KKARLI + Sbjct: 120 LALLEDQLVRLRPVIKPESVIIGAAMVKHLSASAIELFEKILGPTHTSLARKKARLIFSS 179 Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEI-VDLG 236 F+ + + +L + H VFS LD+G+R ++ ++ +DLG Sbjct: 180 FDAERTLTPLPPANLRLPEFQLNLLQHPGVFSMNRLDLGSRLVLEQSHLLPPAKVIIDLG 239 Query: 237 CGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 296 CGNG++G+T + P+A + FVDES AV S+R+N E R E + + L+G++ Sbjct: 240 CGNGILGITAARQQPEAHLTFVDESYRAVDSARINFEAIFGHRPARFEVI--DCLNGIDR 297 Query: 297 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGN 356 + ++ NPPFHQQ + D VAW+MF AR+ L +G+L++V NRHL Y KLK++FGN Sbjct: 298 DSADLIINNPPFHQQQVVGDQVAWQMFRQARQVLGRSGQLWVVGNRHLGYHTKLKRLFGN 357 Query: 357 CTTIATNNKFVVLKAVK 373 C +A+ +KFV+LKA K Sbjct: 358 CKLVASTHKFVLLKATK 374 >UniRef50_Q15YR1 Ribosomal RNA large subunit methyltransferase G n=6 Tax=Gammaproteobacteria RepID=RLMG_PSEA6 Length = 384 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 177/381 (46%), Positives = 244/381 (64%), Gaps = 9/381 (2%) Query: 2 SHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDD--TEIRG-PVLILNDAFGAL 58 + L S L R+PA + QAW++ADEYL++ + T++ G + I ND FGAL Sbjct: 3 TELTLLDHSYELLRYPAENQHVSWQAWDSADEYLMEYVAQNITDLNGLNIHIYNDDFGAL 62 Query: 59 SCALA-EHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKT 117 A + P I DS+++ A NL N + +V +S Q+ +VLIKVPKT Sbjct: 63 GVWFATNNAPLWISDSFVAHKALALNLERNHLPIENVNVQNSLYKANQKADLVLIKVPKT 122 Query: 118 LALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCT 177 LALLEQQL L+ VT +TRIIA KA I STL LFEK LG TTT+LA KK+RLI C Sbjct: 123 LALLEQQLIDLQSSVTPETRIIAAGKANAIQKSTLALFEKHLGLTTTSLAKKKSRLIFCQ 182 Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGC 237 ++ + + +P WK + T + + N ANVFSR LDIGAR + HLP+ IVDLGC Sbjct: 183 YDGVKQSVSPYPTKWKTDNTQFIMSNLANVFSRQQLDIGARVLLAHLPDANHKCIVDLGC 242 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS----- 292 GNGV+GL +L K+P A V+FVDES MA+AS+++N+E NMP+ LD+C+F+++N L Sbjct: 243 GNGVLGLHVLHKSPGAHVIFVDESFMAIASAKMNIEQNMPDKLDQCKFIVSNCLDECLSS 302 Query: 293 GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKK 352 G + VLCNPPFHQQ+ +TD++A +MF ++R LK GEL +V NRHLDY +K+ Sbjct: 303 GENEATVDIVLCNPPFHQQNTITDHIALQMFKDSKRILKHAGELRVVGNRHLDYPQTIKR 362 Query: 353 IFGNCTTIATNNKFVVLKAVK 373 +FG+ +A++ KF +L A+K Sbjct: 363 LFGHYKVLASDRKFSILSAIK 383 >UniRef50_D1XLW4 rRNA (Guanine-N(2)-)-methyltransferase n=5 Tax=Streptomyces RepID=D1XLW4_9ACTO Length = 386 Score = 366 bits (939), Expect = e-99, Method: Composition-based stats. Identities = 165/389 (42%), Positives = 235/389 (60%), Gaps = 18/389 (4%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLD-------DTEIRGPVLILND 53 M+ L L R+P + L+AW+AADEYLL++L+ E G V+++ D Sbjct: 1 MNRLTTSQGVFELTRYPEDPR-DRLRAWDAADEYLLRRLEGPEDGEPAPEAGGTVVVVGD 59 Query: 54 AFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIK 113 +GAL+ ALA ++P I DSY+++ ATR+NL NG D +V+ L + P++ +L++ Sbjct: 60 RWGALATALAGYRPIQITDSYLAQQATRDNLARNGADPDAVRMLSARDTPPERIDTLLLR 119 Query: 114 VPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARL 173 VPK+LA LE QL L V + T +I ++IHTSTL+LFE++LGPT T+LA KKARL Sbjct: 120 VPKSLAFLEDQLHRLAPAVHAGTVVIGTGMVKEIHTSTLQLFERILGPTRTSLAVKKARL 179 Query: 174 INCTFNEPQLADAPQTVSWKLEGTD-------WTIHNHANVFSRTGLDIGARFFMQHLPE 226 I+CT +P L AP ++ E + T+ NHA +F LDIG RFF++HLP Sbjct: 180 IHCT-PDPGLPMAPSPWPYRYELPEDIGVMSGRTVTNHAGIFCADRLDIGTRFFLKHLPR 238 Query: 227 NLE-GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEF 285 +VDLGCGNGV+G P++ V F+DES AVAS+ N P + F Sbjct: 239 RSGPDRVVDLGCGNGVVGTAAALAAPESCVTFIDESYQAVASAEETFRANAPAGAE-ARF 297 Query: 286 MINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLD 345 ++ +A++ V + VL NPPFH A+TD A MF AR L+ GEL++V NRHL Sbjct: 298 VVGDAMADVPEQSVDLVLSNPPFHSHQAVTDATARTMFRGARAALRPGGELWVVGNRHLG 357 Query: 346 YFHKLKKIFGNCTTIATNNKFVVLKAVKL 374 + +L++IFGNCTT+A + KFVVL+AV+ Sbjct: 358 HHTQLRRIFGNCTTVAGDPKFVVLRAVRR 386 >UniRef50_B0TR07 Ribosomal RNA large subunit methyltransferase G n=21 Tax=Shewanella RepID=RLMG_SHEHH Length = 421 Score = 359 bits (921), Expect = 1e-97, Method: Composition-based stats. Identities = 152/386 (39%), Positives = 227/386 (58%), Gaps = 12/386 (3%) Query: 2 SHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRG-PVLILNDAFGALSC 60 + L L R+P+ + N LQAW+AADE+L++ L DTE I+ND FGAL+ Sbjct: 3 TQFSVSGIELELLRYPSRQESN-LQAWDAADEHLIKHLIDTEQTNINTAIINDNFGALTA 61 Query: 61 ALAEHKPYS----IGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPK 116 L P D+ S L T +NL N + ++ +++S + PQ +VL+K+PK Sbjct: 62 GLLSIDPSWALTLETDAKTSLLGTTQNLSRNQLPTDTLTWVNSCDELPQGFELVLMKLPK 121 Query: 117 TLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINC 176 L QL L V+ + TR++ GAKA+ I+ S LE EK LG + +L WKK R+I C Sbjct: 122 NLNYFSHQLNRLSHVLPAGTRVLIGAKAKSINKSLLETIEKNLGAASASLTWKKTRVITC 181 Query: 177 TFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLG 236 ++ ++ P+ +W + I N +NVF+ LDIGAR + ++P+ IVDLG Sbjct: 182 -ISDGKVRPLPKATTWSVPEFKLQITNLSNVFAANKLDIGARIMLDNMPKGDFKSIVDLG 240 Query: 237 CGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE----ALDRCEFMINNALS 292 CGNG++GL P+A + F+D+S MAVAS+R N N + ++ F ++ L+ Sbjct: 241 CGNGILGLHAKQVFPEAYIHFIDDSEMAVASARENWALNKLDNPALVGEQATFGWDDCLT 300 Query: 293 GVEPF-RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLK 351 + R + +LCNPPFHQ A+TD++AW+MF A R LK G L++V NRHL Y KL+ Sbjct: 301 HMSEGFRPDLILCNPPFHQGEAITDHIAWQMFLDAFRRLKNGGILHVVGNRHLAYHVKLQ 360 Query: 352 KIFGNCTTIATNNKFVVLKAVKLGRR 377 +IF NCTT+A+N KFV+L+A K+ ++ Sbjct: 361 RIFKNCTTVASNGKFVILQAQKISKK 386 >UniRef50_A4VI28 Ribosomal RNA large subunit methyltransferase G n=12 Tax=Bacteria RepID=RLMG_PSEU5 Length = 375 Score = 357 bits (917), Expect = 4e-97, Method: Composition-based stats. Identities = 159/377 (42%), Positives = 223/377 (59%), Gaps = 7/377 (1%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRG--PVLILNDAFGAL 58 M LD + SL L R P + PLQA++AADEYLL L + VLILND+FGAL Sbjct: 1 MPILDTPYASLDLIRQPEQPN-EPLQAFDAADEYLLATLHGQGLPAATRVLILNDSFGAL 59 Query: 59 SCALAEH-KPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKT 117 +CALA H + S GDS+++ LA ++NL N + V+F+ ++ VLI+VPKT Sbjct: 60 ACALAAHVEVTSSGDSHLAHLALQKNLARNDLPADRVRFVPASEAAQGPFDRVLIRVPKT 119 Query: 118 LALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCT 177 L+LLE+QL L + ++IA A + + + +L E+ +GP +LA KKARL++ T Sbjct: 120 LSLLEEQLIRLHDQLAPGAQVIAAAMIKHLPRAAGDLLEQYIGPVQASLAVKKARLLSAT 179 Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEG-EIVDLG 236 + +P ++L+ + NHAN+F R GLDIG R F+ HLP+ L + DLG Sbjct: 180 PVDKPAPQSPYPTRYQLDQPKLELLNHANLFCREGLDIGTRAFLPHLPKALGAIRVADLG 239 Query: 237 CGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 296 CGNGV+G+ NPQA++ VDES MAV S+R N + + + + L+ P Sbjct: 240 CGNGVLGIVYALGNPQAELTLVDESYMAVQSARENWQ--VILGERPADIRAGDGLAEQPP 297 Query: 297 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGN 356 + VLCNPPFHQQ + D +AW MF A+ L GEL+IV NRHL Y KLK++FGN Sbjct: 298 GSLDLVLCNPPFHQQQVVGDFLAWRMFTQAKAALTKGGELWIVGNRHLGYHLKLKRLFGN 357 Query: 357 CTTIATNNKFVVLKAVK 373 +A KFVVL+++K Sbjct: 358 AEQVAATPKFVVLRSIK 374 >UniRef50_Q488Q3 Ribosomal RNA large subunit methyltransferase G n=3 Tax=Alteromonadales RepID=RLMG_COLP3 Length = 392 Score = 357 bits (916), Expect = 5e-97, Method: Composition-based stats. Identities = 166/391 (42%), Positives = 244/391 (62%), Gaps = 17/391 (4%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEI---RGPVLILNDAFGA 57 +S ++L L RFP + LQAW++ADEYL+ + D + + V I NDAFGA Sbjct: 2 ISPFIVNDKNLFLSRFPVSQVNRSLQAWDSADEYLINHVHDQNLINAQTKVAIFNDAFGA 61 Query: 58 LSCALAEH-----KPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLI 112 L+ + + SI DSYIS N+ N +D+S L+S P V+L Sbjct: 62 LAVNFCQSTSENPEVISINDSYISSEGASYNIEQNSLDDSHFTQLNSLDSLPNNIDVILY 121 Query: 113 KVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKAR 172 K+PK+ +LL +QL ++K V + IA +A++IH+STL++FEK LG T T+LA KKAR Sbjct: 122 KIPKSKSLLIEQLIQIKKSVNENCIFIAADRAKEIHSSTLKVFEKHLGTTKTSLAVKKAR 181 Query: 173 LINCTFNEPQLADAPQTVSWKLEG--------TDWTIHNHANVFSRTGLDIGARFFMQHL 224 L+ C F+ Q+ +P W + + TI NHANV++R LDIGAR+F+++L Sbjct: 182 LVFCQFDNKQVHQSPFPTVWSIPHKSTNDLPSRELTISNHANVYAREKLDIGARYFIENL 241 Query: 225 PE-NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRC 283 P ++DLGCGNGVIGLT+L P+A V F+DES MA++S++ N+ TN+P+ +++C Sbjct: 242 PTVAANSTVIDLGCGNGVIGLTVLANQPEAHVQFIDESTMAISSAKQNIMTNLPDVIEQC 301 Query: 284 EFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 343 EF +N++L+ +E + +LCNPPFHQ A TD++AW+MF + R LK GEL I+ N+ Sbjct: 302 EFTLNDSLTDIEGGSVDLILCNPPFHQNTATTDHIAWQMFKDSHRVLKKGGELRIIGNQK 361 Query: 344 LDYFHKLKKIFGNCTTIATNNKFVVLKAVKL 374 L Y KL+++FGN T IA+N+KFV A+K Sbjct: 362 LAYHIKLQRLFGNETLIASNDKFVTQSAIKR 392 >UniRef50_Q4ZNG3 Ribosomal RNA large subunit methyltransferase G n=13 Tax=Pseudomonadaceae RepID=RLMG_PSEU2 Length = 374 Score = 352 bits (903), Expect = 1e-95, Method: Composition-based stats. Identities = 156/377 (41%), Positives = 206/377 (54%), Gaps = 7/377 (1%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDD--TEIRGPVLILNDAFGAL 58 M L + F L L R P PLQA++AADEYLL + + VL+LND+FGAL Sbjct: 1 MPLLISPFAELDLIRQPE-QQDEPLQAFDAADEYLLNHVAQAGLSLPSRVLVLNDSFGAL 59 Query: 59 SCALAEHK-PYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKT 117 + +LA H S DS+++ A +NL NG+ +V + ++ VLI+VPKT Sbjct: 60 AASLAPHATVISSTDSFLAAQALEKNLARNGMSYDAVPHIPASEALQGPFDWVLIRVPKT 119 Query: 118 LALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCT 177 LALLE+QL L+ + R+IA A + + S +L E+ +GP +LA KKARL+ T Sbjct: 120 LALLEEQLIRLQGQLAPGARVIAAAMVKHLPRSAGDLLEEYVGPVQASLAVKKARLLFAT 179 Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLE-GEIVDLG 236 ++ +P ++LE + NHANVF R GLDIG R F+ HLP+NL + DLG Sbjct: 180 PQPMEVRTSPYPTRYRLEEPAIELLNHANVFCRDGLDIGTRAFLPHLPKNLGTARVADLG 239 Query: 237 CGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 296 CGNGV+ + NPQA VDES MAV S+ N + L EP Sbjct: 240 CGNGVLAIASALDNPQAHYTLVDESFMAVKSAAENWRA--TLGDRDVRVRAGDGLEMQEP 297 Query: 297 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGN 356 + VLCNPPFHQQ + D +AW MF AR L G LYIV NRHL Y KL ++F Sbjct: 298 DSLDVVLCNPPFHQQQVVGDFLAWRMFLQARAALVTGGALYIVGNRHLGYHTKLSRLFRG 357 Query: 357 CTTIATNNKFVVLKAVK 373 +A KFV+LKA K Sbjct: 358 VEQVAATPKFVILKARK 374 >UniRef50_B1VMX8 Ribosomal RNA large subunit methyltransferase G n=10 Tax=Actinomycetales RepID=RLMG_STRGG Length = 384 Score = 351 bits (901), Expect = 2e-95, Method: Composition-based stats. Identities = 168/387 (43%), Positives = 229/387 (59%), Gaps = 16/387 (4%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDT-----EIRGPVLILNDAF 55 M+ + L RFP +P +AW+AAD+YLLQQL D ++ G V ++ D + Sbjct: 1 MNRFTTSQGAFELARFPE-HPRDPFRAWDAADDYLLQQLTDPGTGPVDLSGTVAVVGDRW 59 Query: 56 GALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVP 115 GAL+ ALA H+P I DSY++ AT NL NGIDE +V+ L S P + V+L++VP Sbjct: 60 GALATALAAHRPVQISDSYLARRATLANLARNGIDEDAVRLLSSRDTPPDRIDVLLVRVP 119 Query: 116 KTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLIN 175 K+LA LE QL L V S T +I ++IHTSTL++FE+++GPT T+LA +KARLI Sbjct: 120 KSLAFLEDQLHRLAPAVHSGTVVIGTGMVKEIHTSTLKIFERIIGPTRTSLAVRKARLIF 179 Query: 176 CTFNEPQLADAPQTVSWKLEG-------TDWTIHNHANVFSRTGLDIGARFFMQHLPENL 228 T +P L ++ E T NHA +F LDIG RFF++HLP Sbjct: 180 ST-PDPALPRTLSPWPYRYELPADVGPVAGLTAVNHAGIFCAERLDIGTRFFLKHLPTRS 238 Query: 229 EG-EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMI 287 +VDLGCGNGV+GL+ NP A + FVDES AVAS+ A + +F++ Sbjct: 239 GAVRVVDLGCGNGVLGLSAAVANPDAHLTFVDESYGAVASAEETF-RAGAPAGAKADFLV 297 Query: 288 NNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF 347 + L+ ++P + VL NPPFH A TD A MF A+ L+ GEL++V NRHL Y Sbjct: 298 GDGLADLDPGSVDLVLNNPPFHSHLATTDATARTMFAGAKTALRRGGELWVVGNRHLSYH 357 Query: 348 HKLKKIFGNCTTIATNNKFVVLKAVKL 374 L++IFGNCTT+A + KFVVL+AVK Sbjct: 358 THLRRIFGNCTTVAGDPKFVVLRAVKR 384 >UniRef50_A5F5X3 Ribosomal RNA large subunit methyltransferase G n=63 Tax=Gammaproteobacteria RepID=RLMG_VIBC3 Length = 376 Score = 346 bits (888), Expect = 9e-94, Method: Composition-based stats. Identities = 152/366 (41%), Positives = 221/366 (60%), Gaps = 11/366 (3%) Query: 14 QRFPATDDVNPLQAWEAADEYLLQQLDDTEIR--GPVLILNDAFGALSCALAE-HKPYSI 70 RFP ++ LQAW+A DEYL+Q ++ + ++I+ND FG LSC ++ HK + Sbjct: 15 HRFPKRNN-ETLQAWDAGDEYLIQHVEQLALPESSHIVIINDHFGTLSCWFSQKHKVSMM 73 Query: 71 GDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRK 130 DSYI+ AT+ NL+ N V+ L + P VVL+++PK+ L L LRK Sbjct: 74 SDSYIAHQATQANLQQNQR--PPVQLLTTLDPVPNDASVVLLQLPKSNRHLVWILSQLRK 131 Query: 131 VVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTV 190 ++ + IIA KA++IHTSTL LFEK LGPTTT+LAWKK RL+ + + Sbjct: 132 ALSPNIPIIAVNKAKEIHTSTLNLFEKHLGPTTTSLAWKKHRLVFSSATVNPANEVNPEC 191 Query: 191 SWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLE-GEIVDLGCGNGVIGLTLLDK 249 W +E T+ N NV+S LD+G+RF ++HLP + + +DLGCGNGV+ + L Sbjct: 192 GWSIEPYAITLTNLPNVYSGESLDLGSRFILEHLPADPTLEDFIDLGCGNGVLSVRLGQL 251 Query: 250 NPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFH 309 NPQAK+ VDES MA+AS++ N+ N + NN L G + ++CNPPFH Sbjct: 252 NPQAKITCVDESFMAIASAQKNLHDN--LGKRDIHCIANNCLDGFPAHSSSMIVCNPPFH 309 Query: 310 QQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG--NCTTIATNNKFV 367 QQ +TD++AW+MF ++ LK G+L+++ NRHL Y KL ++FG + IA N+KFV Sbjct: 310 QQQTITDHIAWQMFCDSKHVLKKGGKLWVIGNRHLGYDVKLARLFGKSHVRVIANNSKFV 369 Query: 368 VLKAVK 373 +L+A+K Sbjct: 370 ILQAIK 375 >UniRef50_A0YBC4 Putative ribosomal RNA small subunit methyltransferase D (RRNA (Guanine-N(2)-)-methyltransferase) (16S rRNA m2G966) n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBC4_9GAMM Length = 390 Score = 341 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 164/387 (42%), Positives = 237/387 (61%), Gaps = 15/387 (3%) Query: 1 MSHLDNGFRSLTLQRFPA----TDDVNPLQAWEAADEYLLQQLDDTEIR---GPVLILND 53 M L F S+ L R + T N L+AW+AADE LL L D E+ G +LI+ND Sbjct: 1 MDILSTAFGSIRLVRSSSALHNTKAANNLRAWDAADELLLAYLADNELPKNTGRLLIIND 60 Query: 54 AFGALSCALAEHKPYSIGDSYISELATRENLRLNGI---DESSVKFLDSTADYPQQPGVV 110 FGALSC+L+++ P S DS +S A + N N + + ++ L ST+D+ +V Sbjct: 61 NFGALSCSLSQYNPCSWSDSSVSLAAAKYNYAANDLGNSPANPLETLASTSDFVGNADLV 120 Query: 111 LIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKK 170 LIK+PKTLALLE QL +LRK T T II + + S L+LFEK++G T+ +LA KK Sbjct: 121 LIKIPKTLALLEHQLMSLRKNTTEKTIIIGAGMVKYLEKSYLQLFEKIIGGTSVSLAKKK 180 Query: 171 ARLINCTFNE-PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLE 229 ARLI T ++ Q A +P + ++ D + N+ANVFSR LDIG+RFF++ + Sbjct: 181 ARLIFSTVDQTKQPAPSPYPIKVAIDEFDLSTINYANVFSREKLDIGSRFFIERMKSLPA 240 Query: 230 GE-IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALD---RCEF 285 I+DLGCGNG++G+ P AK+ F+DES MA+AS++ ++E + + RC+F Sbjct: 241 ASSIIDLGCGNGILGIVAKRLYPTAKITFIDESYMAIASAKASLEHYLGGIITPEHRCDF 300 Query: 286 MINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLD 345 +++N+L VLCNPPFHQ + + D +A +MF ++R L G + IV NRHL+ Sbjct: 301 VVSNSLDQANGEPVELVLCNPPFHQNNTIGDEIASKMFIQSKRILINGGRIRIVGNRHLN 360 Query: 346 YFHKLKKIFGNCTTIATNNKFVVLKAV 372 Y LK++FGNC TIA+N KFV+L+A+ Sbjct: 361 YHIALKRLFGNCRTIASNKKFVILEAI 387 >UniRef50_B4RZB4 Ribosomal RNA large subunit methyltransferase G n=2 Tax=Alteromonas macleodii RepID=RLMG_ALTMD Length = 410 Score = 335 bits (860), Expect = 1e-90, Method: Composition-based stats. Identities = 169/408 (41%), Positives = 234/408 (57%), Gaps = 35/408 (8%) Query: 2 SHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLD-----------DTEIRGPVLI 50 + R L+L R+P LQAW++ADE +++ L+ D E ++I Sbjct: 3 TEFIFADRQLSLIRYPEKHQHVSLQAWDSADELVIEHLESLLSENELSIGDNESTPSLMI 62 Query: 51 LNDAFGALSCALAEHKPYSIGDSYISELATRENLRLN------------GIDESSVKFLD 98 ND FGAL C + PY + DSYIS + ENL+ N + S VK L Sbjct: 63 FNDDFGALGCWFSHLAPYWVSDSYISLRSLHENLKANSLIRASEGSCTQELKTSPVKTLT 122 Query: 99 STAD----YPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLEL 154 S P VV+IKVP+ LALLEQQL L+ +T +T++IA K + I S L L Sbjct: 123 SVESASFKPACAPAVVVIKVPRALALLEQQLIDLQAYITPETQVIATGKVKAITKSALNL 182 Query: 155 FEKVLGPTTTTLAWKKARLINCTFNEP-QLADAPQTVSWKLE---GTDWTIHNHANVFSR 210 FEK +GPTTT+LA KK+RLI T + + A +P W+ + G I N AN F+R Sbjct: 183 FEKYIGPTTTSLAKKKSRLIFATPRDSLKQATSPYPTRWQCKSTMGAALIIDNLANTFAR 242 Query: 211 TGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRL 270 LDIGAR ++H+ + +VDLGCGNGV+G+ L P AKV+FVDES MA+ S+RL Sbjct: 243 QSLDIGARIMLEHMTVSANDVVVDLGCGNGVLGVNALSLAPDAKVIFVDESYMALESARL 302 Query: 271 NVETNMPEALDRCEFMINNALSGVEPFR----FNAVLCNPPFHQQHALTDNVAWEMFHHA 326 NV N P+ +++CEF+ +N L + +LCNPPFHQQ+A+TD++AW+MF + Sbjct: 303 NVLNNFPDKIEQCEFVASNCLETLLNRENKPAVTKILCNPPFHQQNAITDHIAWQMFTDS 362 Query: 327 RRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKL 374 R L +G L +V NRHL+Y KLKK+FG +A++ KFV+L K Sbjct: 363 RDLLVKSGHLVVVGNRHLEYHIKLKKLFGGAKVLASDKKFVILGTAKR 410 >UniRef50_B5JW57 Ribosomal ribonucleate guanine-2-methyltransferase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JW57_9GAMM Length = 388 Score = 329 bits (845), Expect = 8e-89, Method: Composition-based stats. Identities = 152/391 (38%), Positives = 210/391 (53%), Gaps = 23/391 (5%) Query: 4 LDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPV--LILNDAFGALSCA 61 + F LQR P LQAW+AADEYLLQ + RG V L+LND FGAL+ Sbjct: 1 MQTPFGHFELQRLPLRRR-ETLQAWDAADEYLLQH-HAAQRRGDVSPLLLNDNFGALAIN 58 Query: 62 LAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYP-QQPGVVLIKVPKTLAL 120 LA +P S GDS + AT NL+LN + E SV + ST Q VLI+VPK LAL Sbjct: 59 LARQQPVSWGDSATAHAATAYNLKLNALSEKSVLCVPSTQVPALQGVTDVLIRVPKNLAL 118 Query: 121 LEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE 180 EQQLR LR ++ + ++ A + + L E++LGP + A KKARLI+C + Sbjct: 119 FEQQLRQLRPLLAAQAQVTAAGMVKHLPHGAKPLMEQILGPCQLSRAEKKARLIHCVAEQ 178 Query: 181 PQLADAPQTVSW-KLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEG-EIVDLGCG 238 ++ D + N NVF+ LDIGARFF++ IVDLGCG Sbjct: 179 GGQHIEALPDRLCEVSEWDIQLSNQVNVFAHDKLDIGARFFLEQFHHLPAAQRIVDLGCG 238 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 +GV+G+ + P A V F+DES MAVAS++ N + N+ + D F+ ++ L Sbjct: 239 SGVLGIAAQKQQPHAAVTFIDESYMAVASAKKNYQINIGDG-DSVRFIADHQLPACRGSA 297 Query: 299 F---------------NAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 343 F + +LCNPPFHQ + +++++A M + + L GEL++V NRH Sbjct: 298 FKPTCRPEGRPTPTLPDLILCNPPFHQGNTISEHIARGMIQQSHQALAQGGELWLVFNRH 357 Query: 344 LDYFHKLKKIFGNCTTIATNNKFVVLKAVKL 374 L Y LK++FG TIA N KF+V +AVK Sbjct: 358 LSYPSLLKRLFGGFETIAQNKKFIVTRAVKR 388 >UniRef50_Q0VPK2 Ribosomal RNA large subunit methyltransferase G n=2 Tax=Alcanivorax RepID=RLMG_ALCBS Length = 390 Score = 323 bits (829), Expect = 6e-87, Method: Composition-based stats. Identities = 140/388 (36%), Positives = 202/388 (52%), Gaps = 21/388 (5%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDD-------TEIRGPVLILND 53 M+ + + L LQR+P + LQAW+ AD YLL L + + L+LND Sbjct: 1 MTPFHHPWGELCLQRWPRRRN-ETLQAWDNADLYLLNTLAERGQALGNGDNAPKTLVLND 59 Query: 54 AFGALSCALAEH-----KPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPG 108 GAL AL + S GDSY + A R N NG+D ++ F Q P Sbjct: 60 QQGALCLALQQAAASALDIESSGDSYTAAAAARANAVDNGLD-PNLLFCWPLDAPKQSPD 118 Query: 109 VVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAW 168 V+++VPK++ALL+ QL+ L + I + + + L ++ LG W Sbjct: 119 QVIMRVPKSIALLQWQLQWLSGHLPKGVPIWLAGMDKHLPRQLVPLMQRYLGNGRAEYGW 178 Query: 169 KKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL 228 KKARL + LAD +++ W + HA VF++ LDIGARFF+ HLPE L Sbjct: 179 KKARLFSAQAPGRVLADTDYPC--RVDALQWRLTVHAGVFAQQQLDIGARFFLDHLPEAL 236 Query: 229 --EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFM 286 ++ DLGCGNGVIG+ +L NP A+V F DES +A+ S+R NV +A F Sbjct: 237 HTGAKVADLGCGNGVIGMAVLKANPAARVTFCDESWLALESARDNVSRYFSDAES--HFH 294 Query: 287 INNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY 346 + + L+G+E RF+ +L NPPFH + + D+VA +F+ A L GEL ++ NRHL Y Sbjct: 295 LGDGLAGLE-QRFDCILLNPPFHDGYVVGDHVARRLFNQAATALVPGGELRVIGNRHLGY 353 Query: 347 FHKLKKIFGNCTTIATNNKFVVLKAVKL 374 L + F + T +A+N KFVV + Sbjct: 354 HKVLARRFTSVTVLASNAKFVVWRCQGP 381 >UniRef50_A0L9S5 Ribosomal RNA large subunit methyltransferase G n=1 Tax=Magnetococcus sp. MC-1 RepID=RLMG_MAGSM Length = 369 Score = 314 bits (806), Expect = 3e-84, Method: Composition-based stats. Identities = 145/377 (38%), Positives = 209/377 (55%), Gaps = 10/377 (2%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSC 60 M HL+ +LTL+RFP PLQA L + G +LILND FGAL+C Sbjct: 1 MQHLNIHGHTLTLRRFPHKPGC-PLQA--WDAADALALTNHALPDGEILILNDHFGALAC 57 Query: 61 ALA--EHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTL 118 LA E + DSY++ A +NL+LN I E+ + + A P P +LIK+P+ L Sbjct: 58 GLAYPERTLEWVNDSYMAHQALAQNLQLNRI-ETPLHRTPALAASPTNPVGILIKLPRML 116 Query: 119 ALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTF 178 LL QL L + T ++ A+ +D+ ++ +L ++L + A KKARLI Sbjct: 117 QLLSSQLDWLNLHLPKGTPVVIAARQKDMPSTLPDLTRRLLDDVHPSRAEKKARLIFGQL 176 Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCG 238 + Q A + +W D + ++ NVF R LD+GAR +Q+L ++VDLGCG Sbjct: 177 SGRQSGQA-EITAWHCAELDCLLSHYPNVFGRQKLDLGARVLLQNLGTIP-DQVVDLGCG 234 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 NGV+ + L +NP + V+ VDES A S ++N+E + + + ++LS +E + Sbjct: 235 NGVLSIAALQRNPNSHVLAVDESWQATRSCQINLER--VRTPEHFKVVWGHSLSFIEGMQ 292 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCT 358 + VLCNPPFHQ LTD++AW MF A R LK G L +V NRHL Y KL K+FG+C Sbjct: 293 ADLVLCNPPFHQHQTLTDDIAWCMFKDAHRVLKPGGRLRMVGNRHLGYHAKLHKLFGHCR 352 Query: 359 TIATNNKFVVLKAVKLG 375 +IA KFVVL++VK Sbjct: 353 SIAATPKFVVLESVKSS 369 >UniRef50_Q1N4Z1 RRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Bermanella marisrubri RepID=Q1N4Z1_9GAMM Length = 366 Score = 306 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 119/378 (31%), Positives = 185/378 (48%), Gaps = 21/378 (5%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSC 60 M L+ R+L L R P T PL+ W+AADEY++ + D + I+ND FGAL C Sbjct: 1 MDTLNIAGRTLKLVR-PGTPAKLPLRPWDAADEYIINEAQDL---AKITIINDGFGALGC 56 Query: 61 ALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL 120 L++H + I DS + A NL NGI L V IK+P+ + Sbjct: 57 VLSDHIDHWISDSACASDALNSNLNRNGITA-QFHILSPMQMQNANGEVAAIKLPRNASY 115 Query: 121 LEQQLRALRKVVTSDTR-IIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFN 179 + L + R I + + + L ++ G KKA + + Sbjct: 116 NHYLIEQL---IHQGYREIWFAGMMKHLPKNLLSFLQQ-FGNVQRLPFVKKATIFKLAVD 171 Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLP------ENLEGEIV 233 P + + + G T+ HANVF R LD+GA FF+QH + + ++ Sbjct: 172 TPNVKSSGYPKQLNIHGQ--TLWTHANVFGRDKLDLGAEFFLQHFKSIQSQCQKAQPKVA 229 Query: 234 DLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG 293 DL G+G++GL + P +++ F DES MA+ S +L+ + N + F + L Sbjct: 230 DLCAGSGILGLKFKELAPDSELHFYDESAMAIESCQLSWQANQTD--SNVAFHWQDGLEN 287 Query: 294 VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKI 353 EP F+ +LCNPPFH+ + ++D++A +F A++ L G+LYIVANRHL Y L+++ Sbjct: 288 AEPV-FDLILCNPPFHENNTVSDHIARRLFKQAKQALAEQGQLYIVANRHLPYQSVLQRM 346 Query: 354 FGNCTTIATNNKFVVLKA 371 F + +A N KFV+L A Sbjct: 347 FKHVNQVAQNKKFVILHA 364 >UniRef50_A1U203 Methyltransferase small n=2 Tax=Marinobacter RepID=A1U203_MARAV Length = 379 Score = 303 bits (777), Expect = 6e-81, Method: Composition-based stats. Identities = 115/377 (30%), Positives = 174/377 (46%), Gaps = 13/377 (3%) Query: 3 HLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRG-PVLILNDAFGALSCA 61 L L L R L+AW+AADE LL + G VL+++D FGAL+ Sbjct: 5 RLQTPAGDLRLIRP---GGTAGLRAWDAADELLLSAAEPYLADGLRVLVVDDQFGALTLG 61 Query: 62 LAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALL 121 LA ++P ++ DS + N LN L+ +VL+++P+ L Sbjct: 62 LACYQPQTVADSATLAHSLLTNASLNPALPDCPAVLNWRRPPSGPFDLVLLRIPRQAGYL 121 Query: 122 EQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEP 181 LR L V+ D RI+AG + + ++++F + A KKAR++ C Sbjct: 122 AWLLRWLNSVLAEDGRILAGGMIKHLPDRSVDVFASAVVTEQVLPARKKARVVVCRGGSA 181 Query: 182 QLADA-PQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPE-----NLEGEIVDL 235 L + Q + + G + VF+R LDIG R + +P+ G I+DL Sbjct: 182 TLPEWQEQWRGYPVAGLPGPVEALPAVFAREKLDIGTRELLPLIPQAVSRVPPAGRILDL 241 Query: 236 GCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE 295 CGNGV+GL+ L P A+V F D S A+AS N+ E D + ++ Sbjct: 242 ACGNGVLGLSALAGRPGAEVHFSDVSSQAIASVEHNLSRY--EGGDCVHLWHQDGIADDL 299 Query: 296 PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG 355 P + +L NPPFH+ + D++A +F A R L G + +V NRHL Y LK+ F Sbjct: 300 PD-YQLILLNPPFHEGGVVGDHIALRLFRDAARHLAPGGRVLMVGNRHLGYHRSLKQYFS 358 Query: 356 NCTTIATNNKFVVLKAV 372 + A + KFVV +A Sbjct: 359 SVEQRAASPKFVVFEAR 375 >UniRef50_A4BHH5 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BHH5_9GAMM Length = 367 Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats. Identities = 114/369 (30%), Positives = 188/369 (50%), Gaps = 18/369 (4%) Query: 8 FRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKP 67 S LQR P LQAW AADE L++ R P+L+LNDAFGAL+ AL + Sbjct: 10 QSSYRLQRVPQDHR---LQAWNAADELFLERYKPD--RSPILLLNDAFGALAVALHDQPV 64 Query: 68 YSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRA 127 S +++ A + N + N + + ++ L S A + V L +PK++ QL Sbjct: 65 QWWHASAMAQEALQLNCQANRVRQPNI--LTSLATETEAHNVAL-HIPKSINYFAWQLEQ 121 Query: 128 LRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAP 187 + D I A + I +E+ ++ + A KKAR+I ++P+ Sbjct: 122 CCRHSAPDRTIYALGMVKHISAGHIEVMNRLFEEVSPGRAEKKARVI--ELSKPKHIQIS 179 Query: 188 QTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFM---QHLPENLEGEIVDLGCGNGVIGL 244 ++++ + T+ + F+ D GA F+ +HLP +++DLGCGNG++GL Sbjct: 180 TQRQYRVQNPNLTLRHLPGCFAENRPDPGALVFLSYYEHLPA--ADKVLDLGCGNGILGL 237 Query: 245 TLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE-PFRFNAVL 303 +P A+VV +DE+ A+ S+ N N + +N L+ + +F+ +L Sbjct: 238 AYFKAHPDAQVVLIDENAQALKSAEQNWTLNDLPG--NAITVHSNGLNALAADQQFDLIL 295 Query: 304 CNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATN 363 CNPPFHQ + LT+ +A ++F A++ L +GE ++VANRHL Y +LKK F + ++ + Sbjct: 296 CNPPFHQDNTLTEGIAQKLFDDAKKHLSKDGEFWVVANRHLSYATELKKRFKDVHLVSKH 355 Query: 364 NKFVVLKAV 372 KFV+ K Sbjct: 356 PKFVIWKCT 364 >UniRef50_D2T448 Ribosomal RNA small subunit methyltransferase n=1 Tax=Erwinia pyrifoliae DSM 12163 RepID=D2T448_ERWPY Length = 447 Score = 297 bits (761), Expect = 5e-79, Method: Composition-based stats. Identities = 85/355 (23%), Positives = 146/355 (41%), Gaps = 13/355 (3%) Query: 24 PLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATREN 83 + A+ A E +L+ D I+ VL D L L Y Sbjct: 105 SMSAFTPASEVILRH-SDEFIQRRVLFAGDLQDDLPAQLETALSRVHTQQYHHWQILSRV 163 Query: 84 LRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAK 143 L E++ L ++A ++ PK + QL+ L ++ + I + Sbjct: 164 L-----GENAHYGLVASAAMVADCDTLVYYWPKNKPEAQYQLQNLLALLPVGSDIFVVGE 218 Query: 144 ARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHN 203 R S ++ E + ++ L + + DA + + T+ Sbjct: 219 NRSGVRSAEQMVESWAKL-EKIDSARRCGLYHGRLDSNSTFDA-DAFWDEYPLGELTVKT 276 Query: 204 HANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPM 263 VFSR GLDIG++ + L +++G+++D+GCG GV+ L +P+ ++ D + Sbjct: 277 LPGVFSRDGLDIGSQLLLSTLKPHMKGKVLDMGCGAGVLSAMLASFSPKVRLTLTDVNAA 336 Query: 264 AVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMF 323 A+ASS+ + N E + +N S + RF+ ++ NPPFH + + A + Sbjct: 337 AIASSKATLTANQLEG----DVFASNVYSDIS-GRFDMIISNPPFHDGVQTSLDAAQTLI 391 Query: 324 HHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR 378 A L GEL IVAN L Y L + FG+ + N +F V +AVK + Sbjct: 392 RGAVSHLNTGGELRIVANAFLPYPQVLDEAFGSHEVLLQNGRFKVYRAVKGRPAK 446 >UniRef50_Q7MZN0 Ribosomal RNA small subunit methyltransferase C n=6 Tax=Enterobacteriaceae RepID=RSMC_PHOLL Length = 338 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 142/350 (40%), Gaps = 15/350 (4%) Query: 25 LQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENL 84 + A A E +L+ + +L D L+ + + Y + L Sbjct: 1 MSALTPASEVILRHREQ-FSSHHLLFAGDIQDTLATQIDAASVRVHTNQYHHWQSLIRTL 59 Query: 85 RLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKA 144 ES+ L + + Q ++ PK+ QLR+L V+ I + Sbjct: 60 -----GESAWFGLVAEKAFTQGCDTLIYYWPKSKQEARFQLRSLFSVLPKGINIFIVGEN 114 Query: 145 RDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEP-QLADAPQTVSWKLEGTDWTIHN 203 R S +L + + ++ L Q S+++E ++ Sbjct: 115 RSGVRSVDKLM-DGMATFRKIDSARRCSLFYGQLEHEVQFEQDNWWNSYQVEN--VIVNT 171 Query: 204 HANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPM 263 VFS+ LD+G+R + + L G ++D+ CG GV+ L KNP+ + D + Sbjct: 172 LPGVFSQDELDVGSRLLLSTFDKPLSGNLLDIACGAGVLAAVLGKKNPELALTLSDVNAA 231 Query: 264 AVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMF 323 A+ASS+ ++ N E +++N S +E +F+ ++ NPPFH+ + ++ Sbjct: 232 AIASSKATLKANKLEG----HVVVSNVYSNIED-KFDWIISNPPFHEGLKTSLLATDDLI 286 Query: 324 HHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 A LK G+L IVAN L Y L K FG IA KF V +A K Sbjct: 287 RQAPNHLKPGGKLRIVANAFLPYPDLLDKTFGTHEVIAQTGKFKVYQATK 336 >UniRef50_Q65S65 Ribosomal RNA small subunit methyltransferase C n=30 Tax=Gammaproteobacteria RepID=RSMC_MANSM Length = 333 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 74/343 (21%), Positives = 135/343 (39%), Gaps = 18/343 (5%) Query: 32 DEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDE 91 + L + L VL+ + S+ + + + Sbjct: 6 SQVLERHLP-LFADKSVLLAGGVNDDFPQKIQSQCRSVKIWSWYFDYVNQIQGKSA---- 60 Query: 92 SSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTST 151 +D + + + +++ K ++ QL L ++ + R S Sbjct: 61 -----VDFSVIFTGRADLIVYYWTKNKQEVQFQLMQLLANAPVGQEVLIIGENRSGVRSA 115 Query: 152 LELFEKVLGPTTTTLAWKKARLINCTFN-EPQLADAPQTVSWKLEGT-DWTIHNHANVFS 209 ++ G + ++ L + T +P +++ + +++ VFS Sbjct: 116 EKMLAH-FGDIGKIDSARRCGLYHFTLQKQPNFELENFWKTYRSPQLGELIVYSLPGVFS 174 Query: 210 RTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSR 269 LD+G + + + +N+ G+++DLGCG GVIG + KNP AKV D MA+AS+ Sbjct: 175 ANELDVGTQLLLSTVKDNIRGDVLDLGCGAGVIGSMIKLKNPPAKVTMTDIHAMALASAE 234 Query: 270 LNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRC 329 + N + + ++ S VE +F+ ++ NPPFH E+ +A+ Sbjct: 235 RTLLENKLSG----QVLASDVFSHVE-GKFDLIISNPPFHDGIDTAYRAVRELISNAKWH 289 Query: 330 LKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAV 372 L GEL IVAN L Y L + FG +A NKF V + Sbjct: 290 LVPGGELRIVANAFLPYPDLLDEYFGGHKVLAQTNKFKVYSVI 332 >UniRef50_Q15ZS7 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Pseudoalteromonas atlantica T6c RepID=RSMC_PSEA6 Length = 343 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 74/348 (21%), Positives = 138/348 (39%), Gaps = 12/348 (3%) Query: 30 AADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGI 89 AA + LL+ ++ +G L++N G + AL+ + Y + + + + G Sbjct: 4 AASQVLLRS-EELLEQGKWLLVNPTDGHVFSALSNPEVYGFHQFFDIYEQSIASAKAQGR 62 Query: 90 DESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHT 149 D + D ++ +PK A + L + + ++ + + Sbjct: 63 DTQ--HQFVAAYDTDASFDGAVLYLPKAKAHGQMLLANIVACLKPGGTLLVVGENKGGIK 120 Query: 150 STLELFEKVLGPTTTTLAWKKARLINCTFNEP----QLADAPQTVSWKLEGTDWTIHNHA 205 S +L + + + ++P + ++ + + + Sbjct: 121 SAAKLLTPYSDNVNKIDSARHCAMFAAVVDKPVASFDITKWQDVSEHQVADISFKVCSLP 180 Query: 206 NVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAV 265 VFS LD G + + ++ + G I+D CG G+IG KNPQA+VV D S +A+ Sbjct: 181 GVFSHGELDTGTQLLLDNIDRVVSGRILDFACGAGIIGCFAGLKNPQAQVVMSDVSALAI 240 Query: 266 ASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHH 325 S+ + E N +A + + +N L + +F V NPPFH +V Sbjct: 241 YCSQKSAELNGVKA----QVIPSNGLGALT-GKFAQVFTNPPFHTGIKTDYSVTEGFMQQ 295 Query: 326 ARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 + L+ G L +VAN+ L Y +L K F + T+ KF V + Sbjct: 296 LKNHLQDRGSLILVANKFLRYADELDKQFKSVQTLTETTKFSVYCCRR 343 >UniRef50_A1SZ19 Ribosomal RNA small subunit methyltransferase C n=2 Tax=Psychromonas RepID=RSMC_PSYIN Length = 349 Score = 277 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 86/344 (25%), Positives = 146/344 (42%), Gaps = 19/344 (5%) Query: 36 LQQLDDTEIRGPVLI---LNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDES 92 LQ+ + +L+ ++D + ALA ++ ++ + + S Sbjct: 15 LQRNESLFTNKNILVAGNIDDEYPLQLQALANSS------TFCFSDYRYYSVLKDKLTTS 68 Query: 93 SVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTL 152 V F D + ++LI +PK L L + II + + S Sbjct: 69 EVHFTD-NYQGETKFDLLLIFLPKAKQETLYLLANLTPHLQPGASIILVGEKKCGIKSAD 127 Query: 153 ELFEKVLGPTTTTLAWKKARLINCTFNEP----QLADAPQTVSWKLEGTDWTIHNHANVF 208 L + + +++ N+P + +T + T+ I + VF Sbjct: 128 SLLASYSNRINMIDSARHCSILHAELNQPVNAFTQSQWIKTYPLNINNTELQICSLPGVF 187 Query: 209 SRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASS 268 S LD G+ +Q+LP+ + G ++D GCG GVI +L K+PQ V VD + A+AS+ Sbjct: 188 SYGELDKGSELLLQNLPDKMSGRVLDFGCGAGVIACYVLKKHPQLSVDLVDINAFALASA 247 Query: 269 RLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARR 328 +L++++N E +N S ++ ++N +L NPPFH A + + Sbjct: 248 KLSLQSNQLEG----NVFPSNVFSDIK-EKYNILLSNPPFHSGKNTDYTAAETFINQSTN 302 Query: 329 CLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAV 372 LK G+L IVANR L+Y L K F N +NKF VL + Sbjct: 303 HLKSKGKLSIVANRFLNYEGLLFKAFSNVKIDQESNKFKVLSCI 346 >UniRef50_C6APC6 Ribosomal RNA small subunit methyltransferase C n=3 Tax=Pasteurellaceae RepID=C6APC6_AGGAN Length = 334 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 82/346 (23%), Positives = 135/346 (39%), Gaps = 17/346 (4%) Query: 29 EAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNG 88 A E L + L D +L+ L + S+ + REN + Sbjct: 3 CAESEVLERHL-DFLTGKSLLLTGAVNDDFLSDLRRKGFNARAWSWYFDYTNRENQKQQS 61 Query: 89 IDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIH 148 +D + ++ +Q ++L K QL + I+ + R Sbjct: 62 A-------VDFSLEFQRQADLILFYWTKNKQECHFQLMQILAKSPVGQEILIVGENRSGV 114 Query: 149 TSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQ-LADAPQTVSWKLEGT-DWTIHNHAN 206 S + G + ++ L + P S++ D T++ Sbjct: 115 RSVENMLAD-FGDIHKIDSARRCSLYHFQLENPPHFELNSFWKSYQSPQLADVTVYALPG 173 Query: 207 VFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVA 266 VFS LD G + L +N+ G+++D+GCG GVIG + +P+ K+V D MA+ Sbjct: 174 VFSAAELDGGTVLLLSTL-KNVSGDVLDIGCGAGVIGSYIQKHHPKTKLVMTDIHAMALE 232 Query: 267 SSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHA 326 S++ + N + + ++ S VE +F+ ++ NPPFH E+ A Sbjct: 233 SAQRTLRENQLQG----TVLASDVFSHVE-GKFDLIISNPPFHDGIDTAYTAVNELIKQA 287 Query: 327 RRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAV 372 + LK GEL IVAN L Y L + FG +A NNKF V Sbjct: 288 KWHLKAGGELRIVANAFLPYADWLDQHFGGHEVLAKNNKFKVYSVR 333 >UniRef50_C4LB19 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LB19_TOLAT Length = 350 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 77/347 (22%), Positives = 142/347 (40%), Gaps = 17/347 (4%) Query: 32 DEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLR-LNGID 90 +L++ +LI S +L + +S+ + L+ + + Sbjct: 13 SSFLIRH-QSLFQNKSILICGQLQ---SVSLTPLLSEIVTTFLVSDYSVFNMLQATSPMM 68 Query: 91 ESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTS 150 S +++ D Q+ VL+ +PK ++ + + I + R ++ Sbjct: 69 GSRLRYGFMLNDVEQKYDAVLLFMPKAKQEAALWFDSVLPSLKPNGDIFVLGENRGGISA 128 Query: 151 TLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAP------QTVSWKLEGTDWTIHNH 204 +L + + + L P ++ P T+ + I Sbjct: 129 APKLLQPYADKVQKIDSARHCSLFYAQLVTPPVSSTPDSLFSHYTLQLTHDQAALKISAL 188 Query: 205 ANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMA 264 VFS LD G + + LP L G+I+D+GCG GVIG + + P A VV D + +A Sbjct: 189 PGVFSAGELDEGTQLLLDSLPA-LSGDILDVGCGAGVIGAAICQRTPDANVVMTDVNALA 247 Query: 265 VASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFH 324 + S+ +E N A + + ++ S VE +F+ ++ NPPFH H Sbjct: 248 LLSATKTLEGNNLSA----QVIASDMFSDVE-AKFDFIISNPPFHAGLKTNYEATERFLH 302 Query: 325 HARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 A LK G+L++VAN+ L Y L +F + + I N++F +++A Sbjct: 303 QAPAHLKRGGQLFLVANKFLRYEPILADVFHSVSVIKENSRFKIIRA 349 >UniRef50_B7RVB2 Ribosomal protein L11 methyltransferase, putative n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RVB2_9GAMM Length = 371 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 117/373 (31%), Positives = 181/373 (48%), Gaps = 10/373 (2%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSC 60 ++ L+ LQR+P+ + PL+AW AAD LL+ + + L++ND GALS Sbjct: 6 LTRLNCPQGEFELQRYPSR-NREPLRAWCAADVLLLEATKASSVN--TLVVNDDHGALSL 62 Query: 61 ALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL 120 L+ DS ++ A +N LN + V + P +++++PK L Sbjct: 63 PLSASA--MWTDSALAAEALAQNSSLNDLPSPKVIWSTQLPRLP--VDRIVLRIPKQLPY 118 Query: 121 LEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE 180 E QL L V+ + T+++ + + T L E+ LGP +KARL + T Sbjct: 119 FEFQLAQLATVMPAGTQLLCAGMDKHLSPHTAALMEQQLGPVERHRGRQKARLFSATLPG 178 Query: 181 PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPE-NLEGEIVDLGCGN 239 +P S+ + D + ANVFSR LD G+R ++ L + DL CGN Sbjct: 179 EAKGPSPSEASYHCDLIDQKLTGLANVFSREKLDPGSRLMLETLRRAEPVASVADLACGN 238 Query: 240 GVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRF 299 G++G+ L N + V+F DES MA+AS+R F + + L G+E +F Sbjct: 239 GLLGIAALHFNLASSVLFADESAMAIASARA-NAARAARHDSEAAFHLGDGLQGIE-RKF 296 Query: 300 NAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTT 359 + ++CNPPFH H + D + A L G L +VANRHLDY L+++F + Sbjct: 297 DLIVCNPPFHLGHTVDDFAGRRLLQQAAHSLLPGGSLLLVANRHLDYAPSLQRLFRHAEV 356 Query: 360 IATNNKFVVLKAV 372 +A N KFVV +A Sbjct: 357 MAQNAKFVVWRAR 369 >UniRef50_Q2SJX3 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Hahella chejuensis KCTC 2396 RepID=RSMC_HAHCH Length = 342 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 83/335 (24%), Positives = 136/335 (40%), Gaps = 13/335 (3%) Query: 43 EIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTAD 102 ++ G +L+ + A++ L + S+ T N + E + F D Sbjct: 17 QLSGRILLCSPPADAIAAELRQTGVEVSVLSW---DHTAVNACRGAVAEEWL-FTDLALP 72 Query: 103 YPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPT 162 Q + + +PK LL+ L + + I + R+ S + K Sbjct: 73 ADAQWDQIALFMPKARELLDLMLSVVAPALKHAQHIWLVGEKREGVESAAKRLAKEDWDA 132 Query: 163 TTTLAWKKARLINCTFN---EPQLADAPQTVSWKLEGTD-WTIHNHANVFSRTGLDIGAR 218 T + + ++ + T +P+ D + E D + VFS LD G Sbjct: 133 TKVDSARHCQVWSLTPPADWKPKQNDFWRAYELAQEKVDTLQLFTLPGVFSAGRLDEGTE 192 Query: 219 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE 278 +Q LPE ++D GCG GVIG TL + P+A V D + +A+ S+ E N E Sbjct: 193 VLLQSLPELHGRRLLDFGCGCGVIGATLKKRYPKASVELTDINLLALKSAARTAEANGVE 252 Query: 279 ALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYI 338 ++ L+ V+P +A++ NPPFHQ V + R LK G L + Sbjct: 253 L----NVYASDGLAEVQPG-VDAIITNPPFHQGVKQDTRVTQQFLRDCARVLKPGGSLTL 307 Query: 339 VANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 VANR L Y ++ G + N++F V AV+ Sbjct: 308 VANRFLPYPDWIEAHVGPVRVLFENSRFKVYHAVR 342 >UniRef50_B8H9N3 Methyltransferase small n=10 Tax=Actinomycetales RepID=B8H9N3_ARTCA Length = 418 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 106/380 (27%), Positives = 162/380 (42%), Gaps = 19/380 (5%) Query: 13 LQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGP-VLILNDAFGALSCA----LAEHKP 67 L+R P + N LQAW+A D LL+ T G V ++ D +GAL+ LA Sbjct: 41 LRRHPDVEAPN-LQAWDATDRLLLETAAATVRPGSAVTVIGDRYGALTLGALDLLAPGTL 99 Query: 68 YSIGDSYISELATRENLRLNGIDE----------SSVKFLDSTADYPQQPGVVLIKVPKT 117 D E A ++N R + + L A+ VL+++PKT Sbjct: 100 RVHQDLVTGERALQQNARAWQATQETDDAGSGRVPEFRQLPLGAELLTGADTVLLQLPKT 159 Query: 118 LALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCT 177 LA L++ + + I+AG + + + + E+ LA +K+R+I + Sbjct: 160 LAELDEVAATVARHAAPGALILAGGRVKHMSLGMNGVLERYFDSVQPQLARQKSRVIVAS 219 Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE-IVDLG 236 ++ L+ + H VF+ LDIG RF + LP VDLG Sbjct: 220 HSKAGQPPTSFPAVVHLDELGLDVAAHGAVFAGPKLDIGTRFLLTFLPAMKPARHAVDLG 279 Query: 237 CGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 296 CG G++ P+AKV D+S AVAS+ N + R + ++ALS + Sbjct: 280 CGTGILAAMYARTYPEAKVTATDQSAAAVASALATARANGLDG--RISALQDDALSTMAD 337 Query: 297 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGN 356 + VL NPPFH + ++ A R L GEL+ V NRHL Y L++ G Sbjct: 338 ASADLVLLNPPFHVGAGVHAGAGLKLIEAAGRVLAPGGELWTVYNRHLPYLPALERAVGP 397 Query: 357 CTTIATNNKFVVLKAVKLGR 376 T N KF V ++V+ Sbjct: 398 TTVEGNNPKFTVARSVRRSA 417 >UniRef50_Q6FE96 Ribosomal RNA small subunit methyltransferase C n=12 Tax=Acinetobacter RepID=RSMC_ACIAD Length = 338 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 81/350 (23%), Positives = 137/350 (39%), Gaps = 21/350 (6%) Query: 29 EAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAE-HKPYSIGDSYISELATRENLRLN 87 + E +L+Q + +L++N L+ LA H+ ++ + Sbjct: 2 DPRSEVVLRQ--QQYLAIKILLINPPADELAQQLAHKHQVSVWTWNFADHQYFQHQS--- 56 Query: 88 GIDESSVKFLDSTADYPQQ-PGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARD 146 D +P Q P V+I VPK+ LL L + + + I + + Sbjct: 57 -------IQSDFAVTFPDQIPDQVIIFVPKSKELLSYLLHVVVSHLPAGQHIFLVGEKKG 109 Query: 147 IHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE----PQLADAPQTVSWKLEGTDWTIH 202 + + G T + + +L T L + S K E I+ Sbjct: 110 GVERASKQLQSY-GKTVKLDSARHCQLWQTTIETTEQLKPLEQWLKHYSVKNENIQLEIY 168 Query: 203 NHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESP 262 VFS+ LDIG + +L + G+I D GCG GVI L +P ++ +D Sbjct: 169 ALPGVFSQNHLDIGTAVLLPYLNQIKLGKIADFGCGAGVISAYLAQLSPHNEIHALDIDA 228 Query: 263 MAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 322 A+ S+ + N A +R + P + ++ NPPFHQ + + + Sbjct: 229 FALRSTEFTFQRNGL-ASERLHLHAVTGIQD-APKALDVIVSNPPFHQGIHTDYSASEGL 286 Query: 323 FHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAV 372 A++ L +GEL+IVANR L+Y +++ FG C F +L A Sbjct: 287 CKTAKQHLNTSGELWIVANRFLNYPLLIEQTFGQCQVKTDQQGFKILYAK 336 >UniRef50_C9NP08 Ribosomal RNA small subunit methyltransferase C n=9 Tax=Vibrionaceae RepID=C9NP08_9VIBR Length = 357 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 83/360 (23%), Positives = 142/360 (39%), Gaps = 21/360 (5%) Query: 20 DDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEH--KPYSIGDSYISE 77 + + A+ A + +QL VL+ ++ L++H +Y Sbjct: 13 QPESIMSAYIAPSQIAQRQLA-YFKGKHVLVAGESEDLFPVELSKHCESVTVFTTNYGYY 71 Query: 78 LATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTR 137 + Q ++L+ PK A E L L + +T Sbjct: 72 RQLES-------TPQVTTVFGAEFTDQTQADMILLYWPKAKAEAEFLLAMLLAKLGPETE 124 Query: 138 IIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCT-FNEPQ---LADAPQTVSWK 193 ++ + R S ++F K GP + ++ +P L D + Sbjct: 125 VVVVGENRSGVKSIEKMF-KPYGPINKFDSARRCSFYWGQCLEQPAEFNLNDWFKQYRVS 183 Query: 194 LEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQA 253 +G + TI + VFS DIG++ + LP L G+++D GCG GVIG + N + Sbjct: 184 YQGHELTIKSLPGVFSHGQFDIGSQLLLDTLPA-LSGKVLDFGCGAGVIGSVMATLNAEI 242 Query: 254 KVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHA 313 K+ D S +AV SS+ +E N + ++ S + ++ NPPFH Sbjct: 243 KLEMCDISALAVESSKATLEANGLKG----RVFASDIYSD-TSQDYQFIISNPPFHAGLD 297 Query: 314 LTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 + + + A + + G+L IVAN L Y +++ FGNC T+ NKF + A K Sbjct: 298 TSYSATETLLAEAPKHQRSGGQLLIVANSFLKYPPIIQQAFGNCETLNKTNKFTIYYAKK 357 >UniRef50_D0SZB9 16S RNA methylase RsmC n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SZB9_ACILW Length = 344 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 88/350 (25%), Positives = 143/350 (40%), Gaps = 23/350 (6%) Query: 29 EAADEYLLQQLDDTEIRGPVLILNDAFGALSCAL-AEHKPYSIGDSYISELATRENLRLN 87 + E LL+Q + G +L++N L A P ++ + Sbjct: 2 DPKSEVLLRQY--DFLSGRILLINAPTDDLLAEFDASINPAVWTWNFNDFQYFQSQ---- 55 Query: 88 GIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDI 147 ++ V F + +I VPK+ LL L + + + I + + Sbjct: 56 ---QADVHF--GAEMPEAEFDQAVIFVPKSKELLNYLLHNVAAQLKPGSSIFLVGEKKGG 110 Query: 148 HTSTLELFEKVLGPTTTTLAWKKARLIN----CTFNEPQLADAPQTVSWKLEGTDWTIHN 203 + + G T + + +L T + LAD Q + D I Sbjct: 111 IERAAKQL-QPFGKTLKLDSARHCQLWQLVLEHTVEKKALADWAQRYTVSTPNGDLNICA 169 Query: 204 HANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPM 263 VFS+ LD+G + +L + G+I D GCG GVI L NP+ ++ +D Sbjct: 170 LPGVFSQNRLDVGTATLLPYLSQVTSGKIADFGCGAGVISAYLAKLNPKNRIFAMDVDAF 229 Query: 264 AVASSRLNVETNMPEALDRCEFMINNALSGVEPFR--FNAVLCNPPFHQQHALTDNVAWE 321 A+AS+++ E N ++ E A+ G+E +A++ NPPFH + Sbjct: 230 ALASTQMTFEENQL-IPEQIEIK---AVKGIEDAPLFLHAIVSNPPFHMGIETDYTASET 285 Query: 322 MFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 + +RR LK GEL+IVANR L+Y +++ FG CT A F VL A Sbjct: 286 LCKISRRHLKSGGELWIVANRFLNYPTLIEQNFGRCTVKADQQGFKVLFA 335 >UniRef50_C4K8X0 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=RSMC_HAMD5 Length = 336 Score = 269 bits (689), Expect = 9e-71, Method: Composition-based stats. Identities = 82/341 (24%), Positives = 135/341 (39%), Gaps = 13/341 (3%) Query: 32 DEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDE 91 + LL+ + V+ D L + Y L+ N I Sbjct: 8 SQILLRHTRE-FAERSVIFSGDLQDLLPAQFNAKQIRVHTQEYHHWRLLSPVLK-NDIQF 65 Query: 92 SSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTST 151 + + D + V+ PK A + QL L + S T I + R S Sbjct: 66 GVL----PSEDLVSKTDTVIFYWPKNKAQAQFQLEHLCSLFPSQTNIFIVGENRSGIGSA 121 Query: 152 LELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRT 211 +L + +G A + + C +P Q ++++ D I VFS Sbjct: 122 KDLLAENVGLHKMDAARRCSLYYGCLKQKPVFNMESQWRRYQVK--DVQIKTLPGVFSAN 179 Query: 212 GLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLN 271 LD G++ + L G+++DL CG GV+G L ++PQ ++ D + A+ SSR N Sbjct: 180 QLDEGSQLLLSSFDIPLSGKVLDLACGAGVLGTILARQSPQIELTLSDVNAAALESSRAN 239 Query: 272 VETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLK 331 + N +A + ++ S + P RFN +L N PFH+ + + A L Sbjct: 240 LAVNHIKA----RVVPSDLYSDI-PERFNLILSNLPFHKGLKTDIKMIEKCIEEAPGHLY 294 Query: 332 INGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAV 372 G+L +VAN L Y L + FG+ + N +F V +A Sbjct: 295 KGGKLRLVANAFLPYPKLLNRTFGHYEVLTQNARFKVYQAT 335 >UniRef50_A7MUT5 Ribosomal RNA small subunit methyltransferase C n=54 Tax=Vibrionales RepID=RSMC_VIBHB Length = 341 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 91/356 (25%), Positives = 150/356 (42%), Gaps = 23/356 (6%) Query: 25 LQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEH--KPYSIGDSYISELATRE 82 + A+ A + +QL+ VL+ + L H +Y R Sbjct: 1 MSAYIAPSQIAQRQLE-YFNGKHVLVAGEVEDLFPLELVAHCESVEVFTSNYSYYRQIRT 59 Query: 83 NLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGA 142 + ++ S D Q +VL+ PK A E L L + +T I+ Sbjct: 60 SDKVK-------SHFGSEFDIETQADMVLLYWPKAKAEAEYLLAMLMTKLGINTEIVVVG 112 Query: 143 KARDIHTSTLELFEKVLGPTTTTLAWKKARLINCT-FNEPQ---LADAPQTVSWKLEGTD 198 + R S ++F++ GP + ++ T NEP+ AD ++ L Sbjct: 113 ENRSGIKSIEKMFKEY-GPVKKYDSARRCSFYWGTCLNEPKPFNQADWFKSYEITLGEQS 171 Query: 199 WTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFV 258 T+ + VFS D+G+R ++ LP+ L G+++D GCG GV+G + NP+ + Sbjct: 172 LTVKSLPGVFSHGEFDLGSRLLLETLPK-LSGKVLDFGCGAGVLGAFMAKANPEIAIEMC 230 Query: 259 DESPMAVASSRLNVETNMPEALDRCEFMINNALSG-VEPFRFNAVLCNPPFHQQHALTDN 317 D + A+ SS+ +E N ++ S + +RF ++ NPPFH N Sbjct: 231 DINAYAITSSQATLEANGLSG----RVFASDIYSDTAKDYRF--IVSNPPFHSGLDTNYN 284 Query: 318 VAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 A + A + + NGE+ IVAN L Y ++K F NC T+ NKF + A K Sbjct: 285 AAETLLGQAPKYMTANGEMIIVANSFLQYPPIIEKAFNNCETLNKTNKFSIYYAKK 340 >UniRef50_Q2NW11 Ribosomal RNA small subunit methyltransferase C n=164 Tax=Bacteria RepID=RSMC_SODGM Length = 350 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 85/358 (23%), Positives = 136/358 (37%), Gaps = 17/358 (4%) Query: 25 LQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENL 84 + A A E +L+ DT V+I D L L + R+ L Sbjct: 1 MSALIPASEVILRH-QDTFSDKQVVIAGDVQDLLPARLEARSVKVH----TAWFHHRQTL 55 Query: 85 RLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKA 144 +++ L + A ++ PK QL L ++ + + Sbjct: 56 ARALGEQAVQFGLVADAALGGGCDTLIYYWPKNKPEALFQLTNLLSLLPLGCDVFVVGEN 115 Query: 145 RDIHTSTLELFEKVLGPTTTTLAWKKARLINCTF-NEPQLADAPQTVSWKLEGTDWTIHN 203 R S + P + ++ L + +P+ S++LE D I Sbjct: 116 RSGVRSAEPMLAAWC-PLAKIDSARRCGLYHGELVQQPRFDAEAFWQSYQLE--DVVIKT 172 Query: 204 HANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPM 263 VFSR GLD G++ + +G + D+GCG GV+ L ++ D Sbjct: 173 LPGVFSRDGLDNGSQLLLSTFDRPFQGHVADIGCGTGVLSAVLAKGAAGVQLTLSDAHAP 232 Query: 264 AVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMF 323 A+A+SR + N + E + + S + RF+ ++ NPPFH A + Sbjct: 233 ALAASRATLAVNGLQG----EVLAGDVYSAIS-GRFDMIISNPPFHDGMQTNLKAAETLI 287 Query: 324 HHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA---VKLGRRR 378 A L+I GEL IVAN L Y L +FGN + N +F V +A VK R + Sbjct: 288 RGALNHLRIGGELRIVANAFLPYPDLLDAVFGNHQVLVQNGRFKVYQAIHQVKRSRDK 345 >UniRef50_Q3ILJ2 Ribosomal RNA small subunit methyltransferase C n=3 Tax=Alteromonadales RepID=RSMC_PSEHT Length = 341 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 76/342 (22%), Positives = 149/342 (43%), Gaps = 13/342 (3%) Query: 34 YLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESS 93 LL + + + +L++N L + P S ++ A E + + Sbjct: 9 LLLLRNSEKLVGKSILVVNFVQDGFLAELKKRNPESKITAFSYNHANGEFAKNTPGVDVC 68 Query: 94 VKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLE 153 V S D +V++ PK+ + L +R V+T+D ++ + + S + Sbjct: 69 VNHCISGND----FDLVILYYPKSKPEVLMALDNIRAVITADAELLVVGENKSGVKSIEK 124 Query: 154 LFEKVLGPTTTTLAWKKARLINC----TFNEPQLADAPQTVSWKLEGTDWTIHNHANVFS 209 + + K L + ++ ++D + + + +++T + VF+ Sbjct: 125 QLTDKANFSNKIDSAKHCVLYSFAELKQLSQFNISDYHKPFTVSVADSEFTAISIPGVFN 184 Query: 210 RTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSR 269 LD+G + +++ P +G ++D GCG G+I L +NP V D S +A+ ++ Sbjct: 185 HGNLDVGTKILLENAPLIKQGTVLDFGCGAGLIATYLGLQNPALSFVCSDVSALAIYATT 244 Query: 270 LNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRC 329 ++ N + E ++++ L+ + +F+ ++ NPPFH A VA +A++ Sbjct: 245 QTLKLNNIKG----EALLSDGLTNIT-GKFDLIISNPPFHTGIATDYTVAETFLANAKQH 299 Query: 330 LKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 L G+L IVAN L Y L+ F N T+ NNKF V + Sbjct: 300 LTKAGKLNIVANSFLKYPPILEAQFDNYQTVFKNNKFAVYSS 341 >UniRef50_A6FBK7 16S RNA G1207 methylase RsmC n=1 Tax=Moritella sp. PE36 RepID=A6FBK7_9GAMM Length = 344 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 75/343 (21%), Positives = 128/343 (37%), Gaps = 14/343 (4%) Query: 35 LLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSV 94 LL++ +LI LA+ SY + N Sbjct: 12 LLERNTAYFEDKDLLIAGYIEDTYPTELAKIAKKVTLFSYDYSAKLHYDNVSN-----ID 66 Query: 95 KFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLEL 154 + ++ V LI + K+ A + L + + + I + S + Sbjct: 67 NHCSTEYQAVKKHQVALIYMSKSKAEVTYLLANITEHLEDGAMIFMVGENNAGIRSANKF 126 Query: 155 FEKVLGPTTTTLAWKKARLINCTFNEPQLA----DAPQTVSWKLEGTDWTIHNHANVFSR 210 F A +++ L N+P D T + + T+ VFS Sbjct: 127 FAPYGDICNKLDAARRSSLFVTELNKPVAKFVQDDWVTTFPITVNSIELTVCTLPGVFSH 186 Query: 211 TGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRL 270 LD G++ + +L + G ++DLGCG G+IG + + P +KV D S +AV SS+L Sbjct: 187 GKLDTGSKILLNNLHKKPSGRVLDLGCGAGIIGSYIAKRFPASKVEMTDVSALAVKSSQL 246 Query: 271 NVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCL 330 + N + +++ S + +F+ ++ NPPFH A + Sbjct: 247 TLAANELAG----QAYLSDVYSDIS-GKFDYIISNPPFHAGLKTHYASTETFLKEANGYI 301 Query: 331 KINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 G L +VAN L Y ++ FG+C ++KF V A K Sbjct: 302 NPRGHLVLVANSFLKYPEIIEASFGHCLLQIKSSKFAVYYANK 344 >UniRef50_Q1MZV1 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Bermanella marisrubri RepID=Q1MZV1_9GAMM Length = 335 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 80/348 (22%), Positives = 145/348 (41%), Gaps = 21/348 (6%) Query: 32 DEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDE 91 + LLQQ ++ L++N LA+ P + S N + E Sbjct: 7 SQLLLQQ----DLPEHALLVNPPHDD----LAQSIPSGWHAACFSH-------STNTVFE 51 Query: 92 SS-VKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTS 150 + + + A +++ +PK+ L+ + + D I + + S Sbjct: 52 TQGFETVSVLAPKQHAYQSIIVYLPKSKNRLQYVIDYCCSSLADDGEIWFVGENKGGIKS 111 Query: 151 TLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTV-SWKLEGTDWTIHNHANVFS 209 + +K+ + K + +++ + QT ++ D + VFS Sbjct: 112 LAKQTKKLFEQSDKFATGKHSAIVSASKPLTAKDFELQTYYQNQVNELDMHVQALPGVFS 171 Query: 210 RTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSR 269 + LD G +++LP ++G ++D GCG GVIG + ++ +D+ +AV S++ Sbjct: 172 QEKLDKGTEVLLKNLPRKIKGRVLDFGCGAGVIGCYVQQHREVDEIDMLDDDLLAVKSAQ 231 Query: 270 LNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRC 329 +E N ++ E +N VE R+N ++ NPPFHQ V + A+ Sbjct: 232 RTIEKN---SIPYAEAFASNGFDEVED-RYNWIISNPPFHQGVKTHYEVTEQFLAKAKDH 287 Query: 330 LKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRR 377 LK++G+L IVAN L Y LK F +A N F VL+ + R+ Sbjct: 288 LKLSGKLLIVANEFLSYEVILKYHFKMVKEVARENGFKVLQCEGIMRK 335 >UniRef50_A3D8E4 Ribosomal RNA small subunit methyltransferase C n=21 Tax=Shewanella RepID=RSMC_SHEB5 Length = 347 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 82/347 (23%), Positives = 138/347 (39%), Gaps = 17/347 (4%) Query: 32 DEYLLQQLDDTEIRGPVLILNDAFGALSCALAE--HKPYSIGDSYISELAT--RENLRLN 87 + +++ D+ + VL+LN L AL + ++ Y L N +L Sbjct: 6 SQVIIRN-QDSLSQHKVLVLNHEADLLPKALLDVAASVDALALDYHHYLHLAPHANTKLR 64 Query: 88 GIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDI 147 + D ++ V++ PK L + + +++ + + Sbjct: 65 CYFGHDLPHQDPLE--REKYDTVIVYFPKAKPLAPYLFNLAANHLVPNGQLLVVGENKGG 122 Query: 148 HTSTLELFEKVLGPTTTTLAWKKARLI----NCTFNEPQLADAPQTVSWKLEGTDWTIHN 203 S ++L + + L + +L+D + +I N Sbjct: 123 IKSLVKLLPEYFATGMKLDNARHCLLFGSSLEGSAPAMKLSDWVSQYQLTTPQGEISICN 182 Query: 204 HANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPM 263 VFS LD+G + HLP L G ++D GCG GVI LL P + VD + M Sbjct: 183 LVGVFSEKRLDLGTELLLSHLPT-LSGRVLDFGCGAGVIAAALLKAQPSLSLECVDINAM 241 Query: 264 AVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMF 323 A+AS L + N A + ++ L+ +FN ++ NPPFH A T ++A Sbjct: 242 ALASCELTLAANGMTA----KVYPSDGLAQTT-GKFNGIISNPPFHDGLASTTSIAQNFV 296 Query: 324 HHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLK 370 + + L+ NG IVANRHL Y + FG +A NNK+ + Sbjct: 297 TDSAKQLQHNGIWQIVANRHLPYSDIIAAEFGQLKVVADNNKYKLYY 343 >UniRef50_A3J9J3 Nucleotide methyltransferase, putative n=1 Tax=Marinobacter sp. ELB17 RepID=A3J9J3_9ALTE Length = 419 Score = 257 bits (656), Expect = 7e-67, Method: Composition-based stats. Identities = 107/398 (26%), Positives = 177/398 (44%), Gaps = 48/398 (12%) Query: 21 DVNPLQAWEAADEYLLQQ---------LDDTEIRG----PVLILNDAFGALSCALAEHKP 67 +V LQAW++ADE LLQQ L D + G VL+++D FGAL+ L + +P Sbjct: 25 NVASLQAWDSADELLLQQATHWMEDGWLADKQPAGKQHPRVLVVDDNFGALTLGLWDLQP 84 Query: 68 YSIGDSYISELATRENLRLNGIDESSVKFLD---------------------STADYPQQ 106 ++ DS NL LN +S++ S Sbjct: 85 ITLADSAALGRVLAHNLALNPPLQSNLSDQPVPLSWCDDPVLAQETATNSSHSANRLNGP 144 Query: 107 PGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTL 166 +V++++P+ L LR + ++ + ++AG + + ++++F + + Sbjct: 145 FDLVVMRIPRYGDYLAWLLRRVNTLLADNGVLLAGGMIKHLPDRSVDVFAQAVVTEKVCP 204 Query: 167 AWKKARLINCTFNEPQLADAPQTVSWKLEGTD------WTIHNHANVFSRTGLDIGARFF 220 A KKAR++ C +L ++ VF+R LDIG R Sbjct: 205 ARKKARVVICRKGSAELTSWTSAWQGYSLAAGAETAKALSVSALPAVFARDKLDIGTRAL 264 Query: 221 MQHL-----PENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN 275 + H+ +++DL CGNGV+GL L N ++ F D S AV S+ N Sbjct: 265 LPHVTQAAAALAPGAQVLDLACGNGVLGLAALAANSHLELTFSDVSSQAVISAATNAARE 324 Query: 276 MPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGE 335 P++ F ++++ + F+ +L NPPFH+ + D++A +F ARR L+ G Sbjct: 325 FPQSA--FSFRHADSIAA-DGGEFDLILLNPPFHEGGVVGDHIALALFAAARRHLRPGGR 381 Query: 336 LYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 L +V NRHL Y L + F + N KFVVL+A + Sbjct: 382 LLLVGNRHLGYHRSLGRFFPQVRQLDANPKFVVLEASR 419 >UniRef50_Q0VP64 Ribosomal RNA small subunit methyltransferase C n=2 Tax=Alcanivorax RepID=RSMC_ALCBS Length = 325 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 76/343 (22%), Positives = 130/343 (37%), Gaps = 28/343 (8%) Query: 33 EYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDES 92 + LL+Q D VL+++ AL + + D Y Sbjct: 6 QLLLRQ-SDALAGRNVLVVDANDPALKTLSVDATVHVHADDYTIGAQ------------- 51 Query: 93 SVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTL 152 P ++++ + K+L L L L + T + + L Sbjct: 52 ---QWAPAPTVPAGTDLLVLPLSKSLDRLRFLLNWLAGEIAEPTELWLIGPTKGGIRGAL 108 Query: 153 ELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTG 212 + E + T + + +L + +P + LE D ++ VFS Sbjct: 109 KYLEAHVDGTMLEDSARHCKLYSGLL-QPGEKQSLNAWGTVLEVADQEAVSYPGVFSHGR 167 Query: 213 LDIGARFFMQHLP---ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSR 269 LD G+ +Q + G+++D+GCG GVI + L +V VD S AV +S Sbjct: 168 LDEGSALLLQAMEGHNLGKPGKVIDMGCGAGVISVWLARH--GWQVQGVDVSASAVTAST 225 Query: 270 LNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRC 329 ++ N + M + S ++ R + V+ NPPFH + T ++ + A Sbjct: 226 ESLARNGLQG----RIMGGDLFSPIQ-GRVDMVVTNPPFHDRRQRTTDITRRLIAEAPTY 280 Query: 330 LKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAV 372 LK G L++VANR L Y L F + + +F V +AV Sbjct: 281 LKPGGVLWLVANRELPYVQWLDDAFSHVQVASETTRFRVYRAV 323 >UniRef50_Q47VN0 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Colwellia psychrerythraea 34H RepID=RSMC_COLP3 Length = 357 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 80/349 (22%), Positives = 141/349 (40%), Gaps = 14/349 (4%) Query: 32 DEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIG---DSYISELATRENLRLNG 88 + LL+ + + P+ I G + HKP +I ++I A + Sbjct: 11 SQILLRNSELLVAKVPLFINLPEDGFIEAYTEIHKPDTIHCFNTNFIDYQAITKKHCSPT 70 Query: 89 IDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIH 148 ++ ST +V+I PK+ A L L + + +T+II + + Sbjct: 71 KTKNVKATFASTYQTTSCHDLVIIAFPKSKAELNFTLAMITHCINDETKIILVGEKKGGI 130 Query: 149 TSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLAD------APQTVSWKLEGTDWTIH 202 S +L + + A + L F +L+D + +EG + TI Sbjct: 131 QSAAKLTQHIFSCCQKVDAARHCLLFVGLFQPERLSDVFNLQDWFKKYQITVEGIELTIA 190 Query: 203 NHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESP 262 + VFS+ LD+G + +LP + G+++D GCG GVI + K + +D S Sbjct: 191 SLPGVFSQQKLDVGTALLLSNLPSKMTGKVLDFGCGAGVISCFIGKKFSGTNLSLLDVSA 250 Query: 263 MAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 322 +A+ S++ ++ N +N+LS V + V+ NPPFHQ + + Sbjct: 251 LALTSAQESLALNGLSG----NVFPSNSLSDV-NEHYQHVVSNPPFHQGVKTHYQASEDF 305 Query: 323 FHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 + L G + IVAN L Y ++ GN I + F + +A Sbjct: 306 LAGINKKLNKQGNITIVANSFLRYQPIMETHIGNTRVITKDKGFTIYRA 354 >UniRef50_B4S2L3 Ribosomal RNA small subunit methyltransferase C n=2 Tax=Alteromonas macleodii RepID=RSMC_ALTMD Length = 360 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 84/348 (24%), Positives = 135/348 (38%), Gaps = 18/348 (5%) Query: 29 EAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNG 88 +D Y L L E V +++ F AE S+ S T + ++ Sbjct: 26 NPSDAYFLDGLKSQE----VTVIHQYFD----IFAECVRVIPSASFDSRDITSKGFEVSQ 77 Query: 89 IDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIH 148 + + V+I +PK + LR +V + RI + + Sbjct: 78 KVGNHTHIFTPFVALEKSHTDVMISLPKAKTHFQMLLRMAASMVGQNGRIHVVGENKGGI 137 Query: 149 TSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLA----DAPQTVSWKLEGTDWTIHNH 204 S +L ++ G T + + LI P LA T ++ +EGT W + + Sbjct: 138 KSAAKLMQQY-GATQKVDSARHCSLITVIVEAPHLAFEAEAWIDTNTYAVEGTSWKVASM 196 Query: 205 ANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMA 264 VFS LD G ++ L +L G+++D CG GVI ++ K P K+ D S +A Sbjct: 197 PGVFSYKELDAGTELLLEKLSTSLSGDVLDFACGAGVIASYIMLKYPHLKLHLTDVSALA 256 Query: 265 VASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFH 324 + S L + N A + L G+ + ++ NPPFH V Sbjct: 257 IYCSALTLAENQLAA----TLYAADGLHGMT-NKVQHIVTNPPFHTGIKTDYTVTKRFIS 311 Query: 325 HARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAV 372 A+ L G + +VANR L Y L + F T A ++F V +A Sbjct: 312 DAKARLTRGGTMQMVANRFLPYPGLLSEHFQTVYTTAQTSQFSVYQAT 359 >UniRef50_A3WQL8 16S RNA G1207 methylase RsmC n=1 Tax=Idiomarina baltica OS145 RepID=A3WQL8_9GAMM Length = 339 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 81/354 (22%), Positives = 141/354 (39%), Gaps = 29/354 (8%) Query: 29 EAADEYLLQQLDDTEIRGPV---LILNDAFGALSCALAEHKPYSIGDSYISELATRENLR 85 +A L + D + P L+++ L+ + A + Sbjct: 8 DAVARLLSRHQDAEWLSTPRDKRLVIHPDGSQLATLFDNA------WCLHAGHAMHYSHA 61 Query: 86 LNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKAR 145 + + ++L+ V K +L + L L + RI+ + R Sbjct: 62 YTQALSPKL----------EAYQLILLVVAKEQSLNQWILHQL-SLQAPSARILIVGEKR 110 Query: 146 DIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQT----VSWKLEGTDWTI 201 TS ++ + +L L D+ G + Sbjct: 111 GGVTSLVKKLPPAFLKAQKLASGNHCQLFQTRVLTKPLTDSEAPALSGFDVDWRGVSASF 170 Query: 202 HNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDES 261 + VFS+ LD G ++HLPE ++G+++D CG GVIG + K ++ D S Sbjct: 171 SAYPGVFSQGRLDAGTALLLEHLPETIQGKVLDFACGCGVIGALVAQKF-AVELTASDVS 229 Query: 262 PMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWE 321 PMA+AS+++N E + ++ + LS + FN +L NPPFH ++ + Sbjct: 230 PMAIASTQMNWEKLGIQG----RLILADGLSSLSDGSFNWILSNPPFHTGLRTDYDIGEQ 285 Query: 322 MFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLG 375 A + L NG L IVANR L + ++++FG+C +A N KF VL + +L Sbjct: 286 FIKQAFKKLAPNGTLVIVANRFLPWPEHMRQVFGHCDELADNGKFKVLLSKRLS 339 >UniRef50_A6VRG3 Ribosomal RNA small subunit methyltransferase C n=2 Tax=Marinomonas RepID=RSMC_MARMS Length = 353 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 79/359 (22%), Positives = 137/359 (38%), Gaps = 19/359 (5%) Query: 29 EAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNG 88 + + L++ + G +L N + Y+ S A LR+ Sbjct: 4 NSTSQLLVRNEEGLV--GKILFANPEDTYPLDLSRKADVYAWCQSKTYYDAL---LRVGF 58 Query: 89 IDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIH 148 DE ++ ++I PK LL+ L ++ ++ +I + Sbjct: 59 ADEKLFLSEQWALEHGSDFDHIVIYQPKAKELLDYLLASVLPLLKEGGQIWLVGDNKSGV 118 Query: 149 TSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQ----LADAPQTVSWKLEGTDWTIHNH 204 S+++ E L K L P D T ++ G T+ + Sbjct: 119 KSSMKRLEAGLDEVGKRDGAKHCLLYTGYKRRPTKPFVFEDWITTWKQEVAGQTLTLCSL 178 Query: 205 ANVFSRTGLDIGARFFMQHLPENL------EGEIVDLGCGNGVIGLTLLDKNPQAKVVFV 258 VF LD G + L ++ I+D GCG+G+I L L A++ + Sbjct: 179 PGVFGHGKLDKGTDILLNQLNQHRFMSDVASARILDFGCGDGIIALWL-HNKTGARITAL 237 Query: 259 DESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNV 318 D+S MA+ ++ L N D + +N L V+ RFN V+ NPPFH ++ Sbjct: 238 DDSVMALKATELTFAANQVS--DAVTLIASNGLDEVK-GRFNYVVTNPPFHSGVNTDYSI 294 Query: 319 AWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRR 377 A F ++ L +NGEL++VAN L Y L G+ T + + F + + ++ Sbjct: 295 AESFFMMVKQHLTLNGELFVVANDFLRYPPILDAALGSHTRLYRDRGFAIYHGRQPKKK 353 >UniRef50_A0KPP9 Ribosomal RNA small subunit methyltransferase C n=3 Tax=Gammaproteobacteria RepID=RSMC_AERHH Length = 342 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 73/349 (20%), Positives = 135/349 (38%), Gaps = 19/349 (5%) Query: 30 AADEYLLQQLDDTEIRGPVLILNDAFGALSCALAE--HKPYSIGDSYISELATRENLRLN 87 +A +L++ + +L+ LA H Y + + L Sbjct: 6 SAVSQMLERNQALFVGKRLLVCGALEDDYPRQLATLTHSLTVFTTDYCYYRSQQAALGDA 65 Query: 88 GIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDI 147 + + + + +L+ +PK A + L + ++ + + + R Sbjct: 66 ILFDHQL-------GGAPRFDALLLLMPKAKAEAQYLLAMMTPLLEAGAELFLAGENRGG 118 Query: 148 HTSTLELFEKVLGPTTTTLAWKKARLINCTFNEP----QLADAPQTVSWKLEGTDWTIHN 203 +L + ++ L + ++P +L + T+ T+ Sbjct: 119 INGADKLLAPYGDKPVKRDSARRCSLYHGELSKPVEPFELDSWFGRYQCQAGDTELTVLA 178 Query: 204 HANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPM 263 VFS + LD+G++ + LP ++G ++D GCG GVIG L +NP KV VD + + Sbjct: 179 LPGVFSASELDLGSQMLLASLPA-MQGSLLDFGCGAGVIGSVLAKRNPGLKVTMVDINAL 237 Query: 264 AVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMF 323 A+ SSR + N + E ++ S ++ +F ++ NPPFH Sbjct: 238 ALESSRRTLAINGLQG----EVWASDVYSDIQ-GKFGRIVSNPPFHAGLKTFYAATETFL 292 Query: 324 HHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAV 372 A L+ G L IVAN L Y L+ F I+++ KF V + Sbjct: 293 AKAPDHLQSQGSLTIVANAFLRYQPILETHFKRTEVISSDAKFKVYLSK 341 >UniRef50_A5VYJ3 Ribosomal RNA small subunit methyltransferase C n=23 Tax=Pseudomonadaceae RepID=RSMC_PSEP1 Length = 332 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 129/349 (36%), Gaps = 23/349 (6%) Query: 29 EAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNG 88 + E LL+Q + +GP+LI L L + + ++ + R G Sbjct: 2 DPRSEVLLRQAE--LFQGPLLIAGAPADDLLGQLPQAQAWTWH----AGDQAMLESRFAG 55 Query: 89 IDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIH 148 V ++ +PK+ L L L + + + R Sbjct: 56 RSHYGV------EAPEAAFESAVLFLPKSRELAAYLLNTLASRLA-GRELYLVGEKRGGI 108 Query: 149 TSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQ----TVSWKLEGTDWTIHNH 204 + G + + +L T ++ A + LE + + Sbjct: 109 EGAAKQLAA-FGKPRKLDSARHCQLWQVTIDQAPQAKPLESLAERFELALEDGPLQVVSL 167 Query: 205 ANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMA 264 VFS LD G ++HL G ++D GCG GV+G TL + PQ++V +D A Sbjct: 168 PGVFSHGRLDRGTALLLKHLDGLPGGHMLDFGCGAGVLGATLKRRYPQSRVTLLDVDAFA 227 Query: 265 VASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFH 324 VA+SRL + N E E + + + + +L NPPFH + + Sbjct: 228 VAASRLTLAANGLEG----EVISGDGIDAAPTE-LSLILSNPPFHTGVHTNYQASENLLK 282 Query: 325 HARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 + L+ GE+ +VAN L Y ++ GNC + F + +A + Sbjct: 283 KSAVHLRKGGEMRLVANSFLRYQPLIEGALGNCQVRDEADGFRIYQATR 331 >UniRef50_Q5R049 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Idiomarina loihiensis RepID=RSMC_IDILO Length = 334 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 74/343 (21%), Positives = 133/343 (38%), Gaps = 24/343 (6%) Query: 35 LLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSV 94 L +Q G +L+++ G LS AL +S + + I ++ Sbjct: 9 LGRQSAQPWANGSLLVIHPGGGELS-ALPNASAWSFHAGHAAYWKAAGRPVFCQIQPPNL 67 Query: 95 KFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLEL 154 VL V K L + L L + + T + + R ++ Sbjct: 68 SH----------YDGVLFLVAKEKELNQYLLEQLAS-LPTGTPVWFAGEKRSGIQPLMKH 116 Query: 155 FEKVLGPTTTTLAWKKARLINCTFNE-----PQLADAPQTVSWKLEGTDWTIHNHANVFS 209 L P + L NE + D + ++++L + VFS Sbjct: 117 LPAWLQPPQKLASANHCLLFASERNEQVHQSASIEDYAKNITYELNQQQESFVTLPGVFS 176 Query: 210 RTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSR 269 R +D +QH+ + +G +D CG GVI L +++ D SP+A+A+S Sbjct: 177 REHIDPATLLLLQHIKDLPKGRGMDFACGAGVIAKQLASV--ATELMACDVSPIAIAASE 234 Query: 270 LNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRC 329 + + + E + + + +F+ ++ NPPFH +A E +AR+ Sbjct: 235 ITLANEPVKT----ELRLADGI-PDNAGQFDFIVSNPPFHTGQRTDYEIAREFISNARQH 289 Query: 330 LKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAV 372 L G +VANR L + ++ +FGNC+ IA + ++ V A Sbjct: 290 LNKQGVFRVVANRFLPWPEVIESVFGNCSVIADDGRYRVYHAT 332 >UniRef50_C7R392 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R392_JONDD Length = 394 Score = 247 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 96/373 (25%), Positives = 151/373 (40%), Gaps = 29/373 (7%) Query: 29 EAADEYLLQQLDDTEIRG--------PVLILNDAFGALSCALAEHKPYS----IGDSYIS 76 + D LL +L D + + ++N A +A+ P++ DS Sbjct: 20 DGVDRLLLAELTDLIAQHNDWAATLRHITVVNAIHPATVRDIAQLLPHATLTLWNDSCHD 79 Query: 77 ELATRENLRLNGIDESS-------VKFLDSTADYPQQPGV--VLIKVPKTLALLEQQLRA 127 + L V+ T D P VL+++PKT+ L+ Sbjct: 80 AVTLDTALAATQSAPPDSSQSNRIVRSTSPTLDAALTPDTTSVLMRLPKTVDTLDDFAHT 139 Query: 128 LRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAP 187 + + R +A + + + T + T +L K+R ++ + L A Sbjct: 140 IAAHASPRMRFLAAGRVKYMTTRMNDALAASFAAVTASLGRYKSRALHASMPHTPLPPAR 199 Query: 188 QTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL----EGEIVDLGCGNGVIG 243 L I + VFS T LD+G RF + LP L IVD+GCGNG++G Sbjct: 200 FPQQATL--ATIPIAAYGGVFSGTSLDVGTRFLLSTLPTALTDLQSARIVDVGCGNGLLG 257 Query: 244 LTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVL 303 + + +P V D S AV S+R V+ N DR +ALS + + V+ Sbjct: 258 VWIARHHPHVSVTMTDVSAQAVRSARATVDLNNV--GDRVSVRWMDALSQLPDHSADLVV 315 Query: 304 CNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATN 363 CNPPFH A+T A +F R L G + V N L Y L+++ G +AT+ Sbjct: 316 CNPPFHDGTAVTTTPAHRIFADVGRVLTPGGRMLTVFNTPLAYAPTLRRLVGPTRVLATH 375 Query: 364 NKFVVLKAVKLGR 376 KF + ++V GR Sbjct: 376 AKFTITESVTPGR 388 >UniRef50_A9WVF5 16S rRNA m(2)G 966 methyltransferase n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WVF5_RENSM Length = 386 Score = 246 bits (629), Expect = 9e-64, Method: Composition-based stats. Identities = 100/388 (25%), Positives = 177/388 (45%), Gaps = 21/388 (5%) Query: 5 DNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQ----QLDDTEIRGP-VLILNDAFGALS 59 F L+R P + N L AW+A+D LL LD + + V++LND++G ++ Sbjct: 3 QTKFDPALLRRRPDIESSN-LFAWDASDALLLDLATEHLDSSTTQAADVVVLNDSYGGVA 61 Query: 60 CALAEHKP----YSIGDSYISELATRENLRLNGIDE--SSVKFLD-STADYPQQPGVVLI 112 L D E A R N G+ E + + F+D A +VL+ Sbjct: 62 LGLTIRSGLNGIRVHQDLLTGEQALRLNAERLGLGELLTQLPFVDDGGAQLLGGAKLVLL 121 Query: 113 KVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKAR 172 K+P++LA LE+ +A+ + + +IA + + + + + T LA +K+R Sbjct: 122 KLPRSLAELEEMAQAIARFADPEVIVIAVGRIKHMSLAMNRVLAASFEEVTAGLARQKSR 181 Query: 173 LINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQ-----HLPEN 227 + + A + + + H VF+ LDIG RF ++ + Sbjct: 182 PLFASLPREAAVGADFPRGSVIADLNLQVRAHGEVFAGASLDIGTRFLIEQVRAGAIAIP 241 Query: 228 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMI 287 G +DLGCG G++ + + +V+ D S ++AS++ N + + Sbjct: 242 ESGTALDLGCGTGLLAVEMASAQSGLRVIATDRSAASIASAQATALANGV---PQVGVLQ 298 Query: 288 NNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF 347 ++A + + +L NPPFH A+ VA ++FH A R L+ G+L+ V NRHL + Sbjct: 299 DDAAVSLPEGSVDLILLNPPFHSGAAVHSAVATKLFHAASRLLRPGGQLFTVYNRHLTHA 358 Query: 348 HKLKKIFGNCTTIATNNKFVVLKAVKLG 375 L+K+ G + +A N+KFV+L++ + Sbjct: 359 KVLEKVVGRSSVLAQNSKFVILRSTRRS 386 >UniRef50_Q3BNY2 Ribosomal RNA small subunit methyltransferase C n=16 Tax=Proteobacteria RepID=Q3BNY2_XANC5 Length = 392 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 83/387 (21%), Positives = 133/387 (34%), Gaps = 28/387 (7%) Query: 2 SHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDD--TEIRGPVLILNDAFGALS 59 L R L+R A PLQA L GPVL L G Sbjct: 23 PPLPYNGRPFPLRRPMAGPHDAPLQA------LFLPFAQGALPWPEGPVLFLRARDG--- 73 Query: 60 CALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLA 119 L E S E L NG +V+ + +VL+ P+ Sbjct: 74 FPLREQASPQTLTCEQSFRPFAEALERNGW---NVREESEIEADSTRYALVLVLPPRQRE 130 Query: 120 LLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFN 179 + R++A + S ++ G +L R Sbjct: 131 EARALFARAVALTAPGGRVVACQSNNEGARSGEADLRQLTGLAG-SLTKYHCRTYWSAPL 189 Query: 180 EPQLADAPQTVSWKLEG----TDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDL 235 A Q L+ D + VF+ +D + ++HLP L G DL Sbjct: 190 PADTDAALQARWAALDAPRKILDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADL 249 Query: 236 GCGNGVIGLTLLDKNPQAKVVFVDE---SPMAVASSRLNVETNMPEALDRCEFMINNALS 292 G G G + +L + P KV +D A+ +R N++ + + + + Sbjct: 250 GAGFGYLSAEVLARCP--KVTALDLYEAEARALTLARRNLQD--IAHPAQLHYHWRDVTA 305 Query: 293 GVEPFRFNAVLCNPPFH-QQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLK 351 G+ +++ ++ NPPFH A ++ A + L+ G+L +VANRHL Y L Sbjct: 306 GLV-AQYDFIVSNPPFHTPSRADRPDIGQRFIAVAAQALRPGGQLILVANRHLPYEQVLN 364 Query: 352 KIFGNCTTIATNNKFVVLKAVKLGRRR 378 FG A + F ++ A++ R Sbjct: 365 DSFGQVRVAAERDGFKLIAAIRGRGAR 391 >UniRef50_Q1QUF2 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=RSMC_CHRSD Length = 333 Score = 243 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 76/322 (23%), Positives = 123/322 (38%), Gaps = 15/322 (4%) Query: 61 ALAEHKPY--SIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTL 118 L P+ + S + + D ++ PKT Sbjct: 21 WLWVAPPHDAWLHTVGGSVWSADATICQAWRARGRPVHADLAPTLTAPVPGAVLFWPKTH 80 Query: 119 ALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTF 178 AL E L AL + T + + + L+ + + ++ L Sbjct: 81 ALGEWWLLALCAALPEGTPLQVVGEHQGGVKRVLKSLAALGLGCRKVDSARRCTLYATRT 140 Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLP----ENLEGEIVD 234 L+ + E T+ +H VF LD G R ++ LP + ++D Sbjct: 141 ARLALSPEAAWT--RFEAAGLTLESHPGVFGHGKLDDGTRQLLEVLPTALGDPAGQRVLD 198 Query: 235 LGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV 294 +GCG+G++G L + A+V VD AVA++R + N E ++ V Sbjct: 199 VGCGDGILGAWLGVR--GAQVAAVDLDAFAVAATRRTFQANGVAG----EAWQSDVFGDV 252 Query: 295 EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIF 354 ++A++ NPPFHQQ A+ A + A L G L +VAN L Y L+ F Sbjct: 253 S-GSYDAIVSNPPFHQQRAIDYGPAERLIREAPARLVPGGRLVLVANAFLPYPRWLEDAF 311 Query: 355 GNCTTIATNNKFVVLKAVKLGR 376 G T +A + +F V +AVK R Sbjct: 312 GEFTVLADDRRFRVYQAVKTRR 333 >UniRef50_B5JVE3 Ribosomal RNA small subunit methyltransferase C n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVE3_9GAMM Length = 353 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 109/280 (38%), Gaps = 13/280 (4%) Query: 103 YPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPT 162 + Q P V++KVPK+ + + L L + +T ++ +L ++ Sbjct: 78 FRQPPAAVVLKVPKSRSRTDFLLAQLAHCLPENTAFYLVGHKKEGIEGGAKLLKQRASTV 137 Query: 163 TTTLAWKKARLINCTFNEPQLAD--APQTVSWKLEGT-DWTIHNHANVFSRTGLDIGARF 219 + + +L Q + + VFS LD G R Sbjct: 138 DKRDSARHCQLWRAELAPQAFDPEAWLQPFELPVPEAAPLQLATLPGVFSLGKLDRGTRV 197 Query: 220 FMQHLPENL-----EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVET 274 + +L + ++D G G I L L + + VD S +A+ + +N + Sbjct: 198 LLDNLHSTPLSIKKDAPLLDFAAGAGPIALWLKRRYADLNITLVDVSAIALFCAWMNAQV 257 Query: 275 NMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKING 334 N E + + + L GV + A++ NPPFH +A + + + LK G Sbjct: 258 NDMEVVCQ----QADGLQGV-DGEWQAIVSNPPFHTGVETDYRIAEQFIQTSWQRLKRGG 312 Query: 335 ELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKL 374 EL +VAN HL Y ++ FG C +A + F V +A K Sbjct: 313 ELRLVANGHLPYAEWIEAQFGQCERLANEDGFHVYRAFKR 352 >UniRef50_A4BC00 16S RNA G1207 methylase RsmC n=1 Tax=Reinekea blandensis MED297 RepID=A4BC00_9GAMM Length = 319 Score = 240 bits (612), Expect = 8e-62, Method: Composition-based stats. Identities = 67/308 (21%), Positives = 115/308 (37%), Gaps = 7/308 (2%) Query: 65 HKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQ 124 P S D+ + + R+ ++ + S + + ++ PK L Sbjct: 17 LTPVSWFDTPLPSNLIDSDDRVFNLNWAPDNQFSSESTGLATSPLNVLHYPKAKDRLAWW 76 Query: 125 LRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLA 184 L L+K + R+ + S + T + + L T N Q + Sbjct: 77 LDRLQKTLQPGQRLWIVGENNGGIKSLPKRLPHW--EVTKLDSARHCSLFEVTNNTDQPS 134 Query: 185 DAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGL 244 Q ++ + D T + VFS LD G + LPE GE+++ G G+G++ Sbjct: 135 AEEQWTTFSWQ--DLTGYALPGVFSAGRLDKGTEVLLSTLPE-FHGELLEFGAGSGILTS 191 Query: 245 TLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLC 304 L + +V V+ +AV S+ V+ N ++ L + R++A++ Sbjct: 192 ALAKQPSVRRVDAVEIDLLAVRSANRTVQENQLTNKAFI--HWSDGLESLPAQRYDALVS 249 Query: 305 NPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNN 364 NPPFHQ ++F A LK G+ V N L+Y L F T+ Sbjct: 250 NPPFHQGLRTAYAATEKLFAQAHLWLKPGGQFIWVINDFLNYQMHLDSAFSAPETLVRER 309 Query: 365 KFVVLKAV 372 F V K Sbjct: 310 GFKVQKVT 317 >UniRef50_D1BFL3 16S rRNA m(2)G 1207 methyltransferase n=7 Tax=Bacteria RepID=D1BFL3_SANKS Length = 394 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 110/387 (28%), Positives = 166/387 (42%), Gaps = 28/387 (7%) Query: 17 PATDDVNPLQAWEAADEYLLQQL-----DDTEIRGPVLILNDAFGALS----CALAEHKP 67 P D + L EAAD+ + E V++L+D GAL L E P Sbjct: 10 PTPDGTDRLLLHEAADDLREAHAAHEGRESRERHDDVVVLDDRSGALVLGVLAGLEERAP 69 Query: 68 YSI-------------GDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKV 114 S D SE + + L G + D + VVL+++ Sbjct: 70 ESSGPTPVPAPRVRSAQDRVTSERSLQAALADAGACDRVTVHAGLGPDLLRDARVVLLRL 129 Query: 115 PKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLI 174 PK+L LE+ +A+ + D + AGA + + + E+ + G TL KAR + Sbjct: 130 PKSLDALEETAQAVARWAPDDVVVYAGAPVKHMTRTMNEVLLRSFGEVHATLGRHKARAL 189 Query: 175 NCTFN--EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPE--NLEG 230 + + + +L+ D T+ H VF+ T LDIG R + L + Sbjct: 190 VARRPLDAARTTEPTFPRTARLDELDLTVVAHGGVFAGTRLDIGTRTLLGVLDQAAPEAR 249 Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 + VDLGCG GV+ L P +VV D+S AVAS+ N DR + ++A Sbjct: 250 DAVDLGCGTGVLATVLARSRPGLRVVASDQSAAAVASTLATAGANGV--GDRVTGLRDDA 307 Query: 291 LSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKL 350 LS + + V+CNPPFH+ L + A MF A R L+ GEL+ V N HL + L Sbjct: 308 LSTLPDASADLVVCNPPFHEGTTLETDAAHRMFAAAARVLRPGGELWTVYNSHLRHKSAL 367 Query: 351 KKIFGNCTTIATNNKFVVLKAVKLGRR 377 ++ G T + N KF V ++V+ Sbjct: 368 GRVVGPTTMVLQNPKFTVTRSVRPDGA 394 >UniRef50_A1U204 Ribosomal RNA small subunit methyltransferase C n=3 Tax=Marinobacter RepID=RSMC_MARAV Length = 351 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 75/364 (20%), Positives = 131/364 (35%), Gaps = 26/364 (7%) Query: 25 LQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENL 84 + A E LL+ R +L ++D +L P ++E A + Sbjct: 1 MSALPNTHEVLLRNAHLLNGRPALLGVSD------ASLLPRCPVPGI--AMTEHAGLWQI 52 Query: 85 RLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKA 144 + D + + V++ +PK A E +L R + ++ + Sbjct: 53 LSHDTDWAGCFGYEPDRQQQGSCDTVVVFLPKARAECELRLALARYLGKPGAALVVIGEK 112 Query: 145 RDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEP----QLADAPQTVSWKLEGTDWT 200 ++ ++ F V G + + ++ +P +L D G + Sbjct: 113 KEGIAGAIKQFSVVAGEVVKVDSARHCQVWCGRNTQPLTEFRLTDWLSWTELSCAGVALS 172 Query: 201 IHNHANVFSRTGLDIGARFFMQHLPENLEG--EIVDLGCGNGVIGLTL------LDKNPQ 252 + VFS LD G R ++ L E+ G + D CG GVIG L K P Sbjct: 173 VAGLPGVFSLGRLDDGTRMLLETLAESPLGVDRVFDFACGAGVIGSWLHGFHQLAGKMP- 231 Query: 253 AKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQH 312 +V D AV +R + E + L+ V+ + AV+ NPPFH Sbjct: 232 IRVDGTDVQAQAVFCARESYRKAGVNG----EIFAADGLAVVQGN-WPAVISNPPFHTGV 286 Query: 313 ALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAV 372 ++ + L GEL +VAN L Y +++ G +A + +F V +A Sbjct: 287 KTDTSMTEQFLAQVAAHLAHGGELRLVANSFLPYEALIRQHIGPVEKLAQDRRFTVYRAF 346 Query: 373 KLGR 376 + Sbjct: 347 RKKS 350 >UniRef50_UPI0000E105EB rRNA (guanine-N(2)-)-methyltransferase n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E105EB Length = 362 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 81/360 (22%), Positives = 147/360 (40%), Gaps = 27/360 (7%) Query: 32 DEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDE 91 + +L+ + +G V+I+N + L E+ + E A + + + Sbjct: 6 SQVILRN-KEYFAQGNVVIVNPTDAEVFYDLGENITGFHQFYDVYEQAYSADFARHEFNT 64 Query: 92 SSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTST 151 V ++ +PK L L L VV + +I + S Sbjct: 65 HIV-------TPKVLYDAAIVYMPKVKTHLGMLLANLSNVVKTGGQIFIVGHNKSGIKSC 117 Query: 152 LELFEKVLGPTTTTLAWKKARLINCTFNEPQ----LADAPQTVSWKLEGTDWTIHNHANV 207 + EKV + K L T L D T +++L W + +V Sbjct: 118 AKHLEKVCDTVNKVDSAKHCGLFVGTVKANPKAFNLDDFLTTKTYELNEIKWEVAGMPSV 177 Query: 208 FSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDK----------NPQAKVVF 257 FS+ LD+G +QHLP+N++ +++D CG GVI + + P +V Sbjct: 178 FSQDALDLGTHLLLQHLPQNIKNDVLDFACGAGVIAAFVGVRHLHTFPDPNNRPNLHLVL 237 Query: 258 VDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDN 317 D +++ ++ + N + + + +N LS VE +F+ ++ NPPFH+ + Sbjct: 238 SDIHALSLYCAQKTLHLNNLQG----DVVASNGLSNVE-GKFSHIITNPPFHKGINTDYS 292 Query: 318 VAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRR 377 +A AR L G L +VAN L+Y +++ G C + ++NKF V +AV + + Sbjct: 293 IAHSFLVQAREHLIEQGHLTLVANSFLNYAVDMEEHVGPCQKLISDNKFAVYQAVGIRPK 352 >UniRef50_D1YE28 Methyltransferase small domain protein n=3 Tax=Propionibacterium acnes RepID=D1YE28_PROAC Length = 334 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 84/355 (23%), Positives = 142/355 (40%), Gaps = 36/355 (10%) Query: 29 EAADEYLLQ---QLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLR 85 + DE + D + G +++ +AE + + D E +R Sbjct: 7 DPVDELIAAESPHTDSVWVLGRPSLVH---------VAEGRVAAWADDCRDLADIPEAIR 57 Query: 86 LNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKAR 145 LN + V VV + +P +L L++ L L +++ D I+AG + + Sbjct: 58 LNPLTAGDVSDSP----------VVWMSLPASLDELDELLGTLWRILGPDAHIVAGGRIK 107 Query: 146 DIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQ---LADAPQTVSWKLEGTDWTIH 202 + S ++ + +L +KAR+++ + + P+T + TI Sbjct: 108 HMSRSMNDVAARWFNEVHASLGVRKARVLHFSSPRQRPAITGTWPRTNTVN----GLTIR 163 Query: 203 NHANVFSRTGLDIGARFFMQHLPENLEG---EIVDLGCGNGVIGLTLLDKNPQAKVVFVD 259 H VF G+D G + +L + VDLGCGNGVI L PQA + D Sbjct: 164 AHGGVFHTAGVDAGTSLLLDYLDAIAADVHSDAVDLGCGNGVISAHLARLLPQATIHATD 223 Query: 260 ESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVA 319 S AV S+RL + N + L V + V+ NPPFH+ A Sbjct: 224 VSWQAVDSTRLTAQANQL----NIVTHWCDGLVDVPHESVDVVVTNPPFHRGTAQDHAPT 279 Query: 320 WEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKL 374 M A R L+ G L+ V N HL + +++ G + N ++ V++ V+ Sbjct: 280 LAMLADAARVLRPGGTLWCVYNNHLPWASHVRRTIGPTRQVVRNRRYTVIRTVRR 334 >UniRef50_C5CBM4 16S RNA G1207 methylase RsmC n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5CBM4_MICLC Length = 401 Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 85/348 (24%), Positives = 143/348 (41%), Gaps = 14/348 (4%) Query: 39 LDDTEIRGPVLILNDAFGALSCAL--AEHKPYSIGDSYISELATRENLR------LNGID 90 + + GPV +L D GAL+ L A H D +E + NL G + Sbjct: 56 IASGHVPGPVAVLEDRHGALTLPLLMAGHDVRVHQDDASAERSLDANLAAWRAAGRLGGE 115 Query: 91 ESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTS 150 ++ + + + VL+ +P++L L++ R + V ++AG + + + Sbjct: 116 TGELERSATPEEAVRGARTVLLPLPRSLDELDRLSRIVAAVADPGVVLLAGGRDKHMSPR 175 Query: 151 TLELFEKVLGPTTTTLAWKKARLINCTFNEPQL-ADAPQTVSWKLEGTD-WTIHNHANVF 208 + +KAR++ P + P+ + G + HA F Sbjct: 176 MNAVLGAAFEDVVAGRGRRKARVLTARGPRPGVTPRPPEEADRDVPGVGRLHLVAHAGTF 235 Query: 209 SRTGLDIGARFFMQHL--PENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVA 266 D G+R + L G +VDLGCGNG++ + P V+ D+S +AVA Sbjct: 236 GGAAADPGSRLLLTSLADDPRPPGRLVDLGCGNGLLSVGAARLWPHVTVLATDQSAVAVA 295 Query: 267 SSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHA 326 S+ N DR + ++AL+ VL NPPFH +A+ +VA + A Sbjct: 296 STLATARANRV--ADRVRAVRDDALATWPDGTEECVLLNPPFHDGNAVDPSVAHRLVAAA 353 Query: 327 RRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKL 374 R L+ G L+ V N HL Y L+++ G A + F V + + Sbjct: 354 ARVLEPGGRLWCVWNSHLRYRPMLEELVGPTRQTARDRTFTVTVSERR 401 >UniRef50_B6AVZ4 Methyltransferase small n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AVZ4_9RHOB Length = 331 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 75/338 (22%), Positives = 136/338 (40%), Gaps = 16/338 (4%) Query: 41 DTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDST 100 D R +L + D A+ +A + + SY+ + +N +S+ + T Sbjct: 7 DLARRAELLPVLDGTIAVFGPIALERVSGLNTSYL--RCVSDMFTVNEALKSA--GISVT 62 Query: 101 ADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLG 160 + L+ +P++ + + QL + + II + D S + +++ Sbjct: 63 RALDEACAHALVLLPRSKSEI-WQLISAAIAAAPEGWIIVDGQKTDGIESVAKQITRLVS 121 Query: 161 PTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFF 220 + + + + Q P K +G VFS +D + Sbjct: 122 GVE-SYSKGHGKTLWFKGGNAQDLLQPIVTEEKNKGGYL---TSPGVFSADDIDPASELL 177 Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAK-VVFVDESPMAVASSRLNVETNMPEA 279 MQH+P +L G + DLG G G + L +NP + + V+++ A+ +R NVE Sbjct: 178 MQHIPTSLSGHVADLGAGWGYLSDRALSENPSIETLHLVEDNAAALECARANVED----- 232 Query: 280 LDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 339 R EF + L+ + F+A+L NPPFH + A L+ G+L++V Sbjct: 233 -PRAEFHWADVLNWRQSKLFDAILMNPPFHTSRIAEPQIGINFVRAAASLLRPEGKLFLV 291 Query: 340 ANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRR 377 AN HL Y +++ F I N+F V A + + Sbjct: 292 ANAHLPYETTIEQSFEKYDLIVRTNRFKVFCATRGRAK 329 Score = 40.6 bits (94), Expect = 0.092, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 56/167 (33%), Gaps = 17/167 (10%) Query: 29 EAADEYLLQQLDDTEIRGPVLILNDAFG-----ALSCALAEHKPYSIGDSYISELATREN 83 + A E L+Q + T + G V L +G ALS + + + D+ + R N Sbjct: 171 DPASELLMQHIP-TSLSGHVADLGAGWGYLSDRALSENPSIETLHLVEDNAAALECARAN 229 Query: 84 LRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQ------QLRALRKVVTSDTR 137 + + L+ +L+ P + + + +RA ++ + + Sbjct: 230 VEDPRAEFHWADVLNWRQSKL--FDAILMNPPFHTSRIAEPQIGINFVRAAASLLRPEGK 287 Query: 138 IIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLA 184 + A A H E+ + + ++ T +L Sbjct: 288 LFLVANA---HLPYETTIEQSFEKYDLIVRTNRFKVFCATRGRAKLG 331 >UniRef50_A9B5U4 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5U4_HERA2 Length = 365 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 75/350 (21%), Positives = 142/350 (40%), Gaps = 9/350 (2%) Query: 29 EAADEYLLQQLDDTEIRGP-VLILNDAFGALSCALAEHKPYSIG--DSYISELATRENLR 85 + L + G L++ G + ALA + DS ++ A R++ Sbjct: 18 DWGATLLAEWGASVVTPGQQALVIGAGTGRIGLALARAGAHVSFADDSIVALAAARQSFA 77 Query: 86 LNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKAR 145 + D T P ++ I + + + + + G + Sbjct: 78 QAKLPAQFFSTTDLTPSKPFDLVLINILWWSDNQRGAELINLAAQHTNAGGIVAIGGGKQ 137 Query: 146 DIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTD--WTIHN 203 + L E+++GP+ TL K ++ A QT +L D TI Sbjct: 138 AGLSGATTLLEQIVGPSVKTLYKKGHHVVMAFRPLHWQAQPSQTTQHQLSHGDHALTIEA 197 Query: 204 HANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPM 263 A VF++ LD + + + ++DLGCG G++G+ L + + ++D + + Sbjct: 198 TAGVFAQGQLDPASAMLLDAVHIQANQRVLDLGCGAGILGMFLQQRESTLALTYIDSTMV 257 Query: 264 AVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMF 323 A+ +++ N++TN + ++ + V +F+ V+ NPPFH + +A + Sbjct: 258 AIEATKRNLQTNQLTG----RVLASDGIQAVNGEQFDLVVSNPPFHVGRVQSPQLAENLL 313 Query: 324 HHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 A + L NG+L IVANR L Y L+ + N +A + ++ VL K Sbjct: 314 KQAVQVLAPNGQLVIVANRFLRYEPLLETVLSNVHELAGDQRYKVLVGTK 363 >UniRef50_Q0C459 Putative methyltransferase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C459_HYPNA Length = 346 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 64/338 (18%), Positives = 121/338 (35%), Gaps = 18/338 (5%) Query: 45 RGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYP 104 GP+L+LN G L++ + S + L+ G L + Sbjct: 23 EGPILVLNAEPGG---WLSQLPKERVV-CRTSMKPAHDALKAAG-----YNVLAPDSVEI 73 Query: 105 QQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTT 164 Q + ++ P+ I+A + ++F ++ G Sbjct: 74 PQAQLTIVVPPRQRDFARALYARALLAAPEGGVILASLPNTLGGKNAEKVFAEIAGDAG- 132 Query: 165 TLAWKKARLINCTFNEPQLADAP---QTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFM 221 +L K R ++ + ++ + +FS +D G+ Sbjct: 133 SLTKNKCRAFWAVKRADEMNTELVEDWIAQDTPREIEPSLWSRPGLFSWDRIDPGSELLA 192 Query: 222 QHLPENLEGEIVDLGCGNGVIGLTLLDKNPQA-KVVFVDESPMAVASSRLNVETNMPEAL 280 +PE +G +D+G GNG + +L+ + ++ V+ A+ + Sbjct: 193 DSIPEYTKGIGIDIGAGNGFLSREVLNHCDKVERMDLVEADYRALICQEQTMA----PFG 248 Query: 281 DRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 340 RC +AL + ++ L NPPFH A + A LK +G L++VA Sbjct: 249 ARCTIKWADALKDLPRATYDFALMNPPFHTGRADNSELGRAFIRAAAATLKPSGTLWLVA 308 Query: 341 NRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR 378 NRHL Y +L F + + + ++KA K R++ Sbjct: 309 NRHLPYEGELSACFRGVEMLDDEDGYKIIKAEKPKRQK 346 >UniRef50_C7LF42 Methyltransferase n=17 Tax=Brucella RepID=C7LF42_BRUMC Length = 340 Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 109/326 (33%), Gaps = 11/326 (3%) Query: 52 NDAFGALSCALAE---HKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPG 108 + L+C LA +P + + L L + L + ++ Sbjct: 22 DPGQSFLACGLAADRLLEPEWKQALTCLQPWRPDWLALQKEGFHAEPRLATDRNFSGG-- 79 Query: 109 VVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAW 168 L+ + K E L V I+ + S + + + + ++ Sbjct: 80 --LLLLGKHRGRNEAWFAQLLARVQPGGWIVVSGDKKLGIDSFRK-WAGNIAEISDRMSK 136 Query: 169 KKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL 228 A + + + + +FS +D G+ +H+ + + Sbjct: 137 NHAVVFWLRRPDDLDEAFIADLKPLAADIEGGFRTEPGMFSHGAIDKGSALLARHMEKIV 196 Query: 229 EGEIVDLGCGNGVIGLTLLDKNPQAK-VVFVDESPMAVASSRLNVETNMPEALDRCEFMI 287 G + DLG G G + L + K + + A+ ++R N+E F Sbjct: 197 FGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADYEALEAARGNLERLGASIP--ISFNW 254 Query: 288 NNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF 347 + S ++ V+ NPPFH+ ++ A LK G L +VANR L Y Sbjct: 255 FDVTSEKIAGIYDTVIMNPPFHEGRVTDVSLGQSFIAAAASRLKPGGRLLMVANRQLPYE 314 Query: 348 HKLKKIFGNCTTIATNNKFVVLKAVK 373 LK +F T + F + A K Sbjct: 315 LTLKGLFKTVTLLEEAEGFKIFDAKK 340 >UniRef50_P57413 Ribosomal RNA small subunit methyltransferase C n=5 Tax=Buchnera aphidicola RepID=RSMC_BUCAI Length = 338 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 112/272 (41%), Gaps = 7/272 (2%) Query: 100 TADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVL 159 + + Q V++ PK + + QL + +T I S + +K + Sbjct: 71 SQEMIQNCDVIIYYWPKDKSEAKFQLMNIISCSPINTEIFIVGNNSSGVKSAPLMLKKWI 130 Query: 160 GPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARF 219 + K + LI+ + + L + I + VF +D G++ Sbjct: 131 -ELEKIDSAKHSILISGLIKKKAIFVLEDFFKTHLW-KNLIIKSLPGVFGHKKIDSGSKL 188 Query: 220 FMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEA 279 + G+++D+GCG G + +LL +P A + VD + A+ S+ + +N Sbjct: 189 LASTFSNRITGKVLDIGCGTGFLSASLLYFSPDAILTLVDNNMYALKCSQYTLNSNKFNG 248 Query: 280 LDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 339 + + +N S V +F+ ++ NPPFH + N+ +M A++ L GEL V Sbjct: 249 ----KIVYSNLYSNVF-KKFDLIISNPPFHNDLQINFNIIEKMICGAKKYLTKTGELRFV 303 Query: 340 ANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 +R ++ L K F I +++ V +A Sbjct: 304 TSRFINCHFLLNKFFQKYYVIKETSQYKVYQA 335 >UniRef50_A0NLD9 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NLD9_9RHOB Length = 352 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 62/281 (22%), Positives = 108/281 (38%), Gaps = 10/281 (3%) Query: 100 TADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVL 159 VL+ + QL +IA A + + + +L Sbjct: 67 AETEADGFDAVLVLPGRQRQEARAQLARAVSKTRPGGIVIACAPNTEGAKTLESDLQDLL 126 Query: 160 GPTTTTLAWKKARLINCTFNEPQLA----DAPQTVSWKLEGTDWTIHNHANVFSRTGLDI 215 G + K R++ ++ L T+ D + VF+ +D Sbjct: 127 GSAEK-MTKNKCRVVWSDVSDDSLNTSLLAEWLTLDAPRPVLDGAFVSRPGVFAWDRIDP 185 Query: 216 GARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAK-VVFVDESPMAVASSRLNVET 274 +R LP L+G DLG G G + + +K P+ + + A+ + N+ Sbjct: 186 ASRLLADQLPATLKGRGADLGAGFGYLTRAVFEKAPKVTSMDLFEAEKRALDLAEQNLAA 245 Query: 275 NMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFH-QQHALTDNVAWEMFHHARRCLKIN 333 + L + ++ G+E ++ V+ NPPFH A +V A R L+ Sbjct: 246 --FKGLRTMNGIWSDVTQGIE-GPYDFVVSNPPFHQAGKADRADVGQGFIRSAARGLRPG 302 Query: 334 GELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKL 374 GE ++VANRHL Y H L ++F + +A + V++AVK Sbjct: 303 GEFFMVANRHLPYEHTLGEVFADVKQLADEGGYKVIRAVKR 343 >UniRef50_A6WWW0 Methyltransferase small n=21 Tax=Brucellaceae RepID=A6WWW0_OCHA4 Length = 340 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 61/320 (19%), Positives = 106/320 (33%), Gaps = 11/320 (3%) Query: 58 LSCALAE---HKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKV 114 L+C L+ + + + L L +V L + L+ + Sbjct: 28 LACGLSADRRLEDELKQALTFLQPWRPDWLVLEKEGFKTVPRLGEEKRFSGG----LLLL 83 Query: 115 PKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLI 174 K E L V I + S + + + + ++ A + Sbjct: 84 GKHRGRNEAWFAELLARVEPGGWIAVSGDKKLGIDSFRK-WASNIAEISDRMSKNHAVVF 142 Query: 175 NCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVD 234 + + D +FS +D G+ + H+ + G + D Sbjct: 143 WLRRPVDLTDEFIAALKPLATDIDDVFRTEPGMFSHGVIDKGSALLVPHMEKIFFGNVAD 202 Query: 235 LGCGNGVIGLTLLDKNPQAK-VVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG 293 LG G G + L + K + + A+ ++R N+E F + S Sbjct: 203 LGAGWGYLAAQCLKFADRIKSIDLYEADYEALEAARGNLERLGASVP--ISFNWFDVTSE 260 Query: 294 VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKI 353 ++ V+ NPPFH+ ++ A LK G L +VANR L Y LK + Sbjct: 261 KMAGIYDTVIMNPPFHEGRVTDVSLGQAFIAAAASRLKPGGRLLMVANRQLPYETTLKGL 320 Query: 354 FGNCTTIATNNKFVVLKAVK 373 F N T + N F + A K Sbjct: 321 FKNVTLLEEANGFKIFDAKK 340 >UniRef50_Q1YVK1 RsmC protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YVK1_9GAMM Length = 353 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 66/360 (18%), Positives = 131/360 (36%), Gaps = 34/360 (9%) Query: 29 EAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPY-SIGDSYISELATREN---- 83 + + L QQL D E G LI+ D + P+ +I S ++ R N Sbjct: 3 DPSVALLAQQLHDLE--GSCLIIADEN-------WDDAPWMTIAQSGNAKRILRSNRYEI 53 Query: 84 --LRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAG 141 + D +L +V K A+ + ++ D ++ Sbjct: 54 AQAATQAGLSTQFSDFDFNDLETASFDSILFRVSKERAVSHHVINQASVLLKRDGTLMLS 113 Query: 142 AKARDIHTSTLELFEKVLGP---TTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTD 198 + D + K+ G + + +RL + + +L D + + Sbjct: 114 GEKTDGVKTYTSHANKLFGDNCQPRKSGNYYLSRLTKYSDDGKRLDDKNYLALRTIGSPE 173 Query: 199 -WTIHNHANVFSRTGLDIGARFFMQHLPE--------NLEGEIVDLGCGNGVIGLTLLDK 249 + + +F +D G+ + LP+ N ++DLGCG G + + Sbjct: 174 HLPLQSKPGIFGWNKIDQGSALLIHQLPQFIQSFGEANRPQSLLDLGCGYGFLSCAAAQQ 233 Query: 250 NPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFH 309 K+ D + A+ + ++N + + + +A +E RF+A++CNPPFH Sbjct: 234 G-LTKITATDNNAAALKACKVNFDALEVDG----TVLAGDAGCQIE-ERFDAIICNPPFH 287 Query: 310 QQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVL 369 Q + + + + ++R L G V N + K + F +A +N F ++ Sbjct: 288 QGFNIDSELTAKFLNASKRLLAPRGRALFVVNNFIPLEKKAQDYFPRVREVARSNSFKLI 347 >UniRef50_C1ZEP1 16S RNA G1207 methylase RsmC n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZEP1_PLALI Length = 390 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 79/358 (22%), Positives = 140/358 (39%), Gaps = 24/358 (6%) Query: 30 AADEYLLQQLDDTEIRGPVLILNDAFGA-LSCALAEHKPYSIGDSYISELATRENLRLNG 88 A++ ++ L D ++G ++ N + A + ALA KP S + ++ R+ L Sbjct: 22 PAEQLMVDALAD--VQGERILCNSSGRAQFAFALAIAKPQSQVTCWFLDVHLRDQAALAP 79 Query: 89 IDESSVKFLDSTADYPQ-QPGVVLIKVPKT--LALLEQQLRALRKVVTSDTRIIAGAKAR 145 + L D+P + + + +PKT L L+ + +IA R Sbjct: 80 AGVPANLQLVCEPDFPGIEYQTICLVLPKTGEAELTRDLLQQACVRLVEGGTLIATTDMR 139 Query: 146 D---IHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTD--WT 200 D +HT F KV T +K E + + Sbjct: 140 DDQWLHTEIQRFFPKV-----TRRPTRKGVTYLAIKTESPKKLKNHDCEFMFRDGERLIR 194 Query: 201 IHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDE 260 + + VF+ LD+GAR + + +G+IVDLGCG+G + + ++P+ V+ VD Sbjct: 195 MKSRPGVFAHRKLDVGARTLISVIEPMEQGQIVDLGCGSGGVAVAAALRHPELDVLAVDS 254 Query: 261 SPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAW 320 +P A+ ++ + N R + ++ +E + V NPP+ +A Sbjct: 255 NPRAIECTQWAAKENG---TSRVQTRLDATGKSLESNSVDVVYANPPYFS----NYKIAG 307 Query: 321 EMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR 378 A R L G +YIV Y L +F N T+ + ++KA K + Sbjct: 308 IFIETAFRILIPGGRIYIVTKAPAWYVESLPLLFENVTSDLI-RGYSIVKATKSMSGK 364 >UniRef50_A8LQD1 Ribosomal RNA small subunit methyltransferase C n=2 Tax=Rhodobacteraceae RepID=A8LQD1_DINSH Length = 333 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 66/275 (24%), Positives = 104/275 (37%), Gaps = 10/275 (3%) Query: 101 ADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLG 160 L+ VP+ L V I+ + D S ++ K L Sbjct: 61 PQAEGAFATALVCVPRAKDHARALLAEAIGRVGPGGLIVLDGQKTDGVDSLVK-LAKSLL 119 Query: 161 PTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFF 220 A +L+ +P ++ L + + A FS +D G+ Sbjct: 120 TGVEVYAKAHGKLLWGRVPDPL--PDLAPLTPPLTSPEGWVTARAG-FSAGAVDAGSALL 176 Query: 221 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEAL 280 HLP L+G+++DLG G G + L + V+ A+ ++R NV+ Sbjct: 177 AAHLPARLQGDVLDLGAGWGYLAKAALASGQVTGMDLVEAEFDALEAARRNVDD------ 230 Query: 281 DRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 340 R F+ +A R++A+LCNPPFH + A R LK +G L +VA Sbjct: 231 PRARFLWEDAAVFAPGKRYDAILCNPPFHTSRKADPAIGQMFLRTAARLLKPSGVLGLVA 290 Query: 341 NRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLG 375 NRHL Y H L + FG + + + A K Sbjct: 291 NRHLPYEHTLAECFGEAQPVTEAQGYKIFHARKPR 325 >UniRef50_Q1GDK1 Methyltransferase small n=13 Tax=Rhodobacteraceae RepID=Q1GDK1_SILST Length = 328 Score = 210 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 66/280 (23%), Positives = 111/280 (39%), Gaps = 16/280 (5%) Query: 99 STADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKV 158 + ++ +P++ L Q + ++ D S L+ K Sbjct: 63 AEVAEDATYDAAVVFIPRSKPLARQLVAQAVAATQ--GPVLVDGAKTDGIDSLLKELNKR 120 Query: 159 LGPTTT-TLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGA 217 P+ + A KA I + P V D VFS +D + Sbjct: 121 TRPSHAISKAHGKAFCIEGGIDLSDWVPGPSEV-------DGGFVTAPGVFSADAIDPAS 173 Query: 218 RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP 277 + LP+ L E+ DLG G G + +L ++ + V+ +A+ ++ NV Sbjct: 174 ALLARALPKKLGKEVADLGAGWGYLSAEILRRSNLETLHLVEADHVALTCAQTNVTDAH- 232 Query: 278 EALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELY 337 EF +A S + +AV+ NPPFH A ++ +A R LK G+L+ Sbjct: 233 -----AEFHWADARSWGQKGSLDAVVMNPPFHSGRAAEPSLGQAFIANAARLLKPAGQLW 287 Query: 338 IVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRR 377 +VANRHL Y L + F + A +N+F +L V+ R+ Sbjct: 288 MVANRHLPYEALLGECFVSFEEAAGDNRFKILHGVRPRRK 327 >UniRef50_C7MEY2 16S RNA G1207 methylase RsmC n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MEY2_BRAFD Length = 411 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 90/383 (23%), Positives = 158/383 (41%), Gaps = 36/383 (9%) Query: 26 QAWEAADEYLLQQLDD--TEIRGPVLILNDAFG---ALSCALAEHKPYSIGDSYISELAT 80 Q + D ++ ++ T +++++DA G A + A P ++ S+ S L Sbjct: 30 QGPDQTDRVIIAAAEEIGTGCPCGLIVVDDATGELTAFALASVAEHPDAVVLSWTSSLPL 89 Query: 81 RENLRLNGIDE-----------SSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALR 129 +LR + V L+ A + +VL+++PK + LE + R L Sbjct: 90 ATSLRERFAGQIEAGRLHVPAGPDVLPLEQAAAEVEGHLLVLMRLPKAVHALEDRARRLA 149 Query: 130 KVVTSDTR----IIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKAR-----LINCTFNE 180 V + + IIAG + + + + + V + K+R + + Sbjct: 150 AAVRTGGQDGLGIIAGGRVKHMTRAQNDALATVFSEVRASRGIGKSRALIATELRASSAA 209 Query: 181 PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLP----------ENLEG 230 P D V+ + + + + VF D G+R +Q L + Sbjct: 210 PVAIDGSARVAVRGQQRELALRGVGAVFGGASADAGSRLLLQALDRALVSGDLTADAPVT 269 Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 DLGCGNG++ L P+A V+ D AV+S+R + N E + E ++A Sbjct: 270 AAADLGCGNGLMTAHLAAALPEASVLGSDADADAVSSTRATLAANALEREE-VEVSWDDA 328 Query: 291 LSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKL 350 LS V + VL NPPFH ++ + + A R L+ G+L+ V N HL Y ++ Sbjct: 329 LSRVADSSLDLVLLNPPFHDGTSVDATLVQGLLDTAARVLRPGGQLWFVHNSHLRYRTEV 388 Query: 351 KKIFGNCTTIATNNKFVVLKAVK 373 ++ G A + +F VL AV+ Sbjct: 389 ERRAGAVQQRARDRRFTVLSAVR 411 >UniRef50_A0LDZ4 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDZ4_MAGSM Length = 356 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 60/285 (21%), Positives = 112/285 (39%), Gaps = 18/285 (6%) Query: 101 ADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLG 160 + +L+++P+ + + + + ++ + K Sbjct: 77 PSGEEPASHILMELPQGKEAAKLAIEEALASLPPEGKLWLFGDKESGI----QPLPKYWS 132 Query: 161 PTTTTLAWKKARLINCTFNEPQLADAPQTVS-----------WKLEGTDWTIHNHANVFS 209 T L +L+ + + + D T+ +FS Sbjct: 133 NGHTILNKGHLKLVQLNKTSQWQDQPSKKKPILPTRVEGEPFYHYQNGDVTLATLPGLFS 192 Query: 210 RTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSR 269 D + +Q L ++D GCG G+IG TL +P +V D+ A S Sbjct: 193 WAEPDAASLMLLQALQHQRMYHLLDWGCGCGLIGTTLAKHHPTLQVTLSDDMVRATRCST 252 Query: 270 LNVETNMPEALDRCEFMINNALSG-VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARR 328 +V N +A RC+ ++ + + + F+ ++ NPPFH+ +L VA E A + Sbjct: 253 ESVRLNQLQA--RCQVILEDGIGPHLRNQGFDTIVTNPPFHRGQSLNREVALEFIGDAVK 310 Query: 329 CLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 L+ G L++VAN LDY L+ F T+ +++F+V KA+K Sbjct: 311 ILERGGALWLVANSFLDYGPILQASFKKVETVLRDSRFIVWKAIK 355 >UniRef50_A2BME9 Predicted Methyltransferase n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BME9_HYPBU Length = 198 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 8/202 (3%) Query: 176 CTFNEPQLADAPQ-TVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVD 234 + P+ P+ VS L G + VFS +D G R ++H EG ++D Sbjct: 3 AHYYRPRSRKGPRMLVSDYLRGVTVEFYVSTEVFSPREVDEGTRLLIEHAIVPEEGTVLD 62 Query: 235 LGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV 294 +GCG G IG+TL +P+ VV VD +P AV +RLN N E +R E + + V Sbjct: 63 MGCGYGAIGITLAKAHPRLHVVMVDVNPKAVELARLNARHNGVE--NRVEVLQGDLYEPV 120 Query: 295 EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLD-YFHKLKKI 353 + + F+A++ NPP A + ++ A LK G L IV + + ++K Sbjct: 121 KGYHFDAIISNPP----LAAGMKIIEKLILEAPAHLKPGGSLQIVMRKGAEKAKELMQKA 176 Query: 354 FGNCTTIATNNKFVVLKAVKLG 375 FGN + + +L A K Sbjct: 177 FGNAKVLLRKKGYTILYAEKPS 198 >UniRef50_D1BX92 rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BX92_XYLCX Length = 440 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 100/388 (25%), Positives = 166/388 (42%), Gaps = 42/388 (10%) Query: 29 EAADEYLLQQLDDTEIRGP-------VLILNDAFGALSCALAE---HKPYSIGDSYISEL 78 +A D LL + R V+++ D FGAL+ LA S D+ SE Sbjct: 55 DATDRLLLDEARPLLARPEAGSALDDVVVIGDRFGALAVGLAALGRRGVRSHTDAVTSER 114 Query: 79 ATRENLRLNGIDESSVKFLDS------TADYPQQPGVVLIKVPKTLALLEQQLRALRKVV 132 A ENLR + D + +VL+++P++LA L++ + + Sbjct: 115 AVTENLRTAHRGPLLGQTFDLRQHDSLEPGLVRGARLVLLQLPRSLAELQEVAELVAREA 174 Query: 133 TSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAP--QTV 190 D ++AG + + + + ++ + TLA K+R++ P+ AP V Sbjct: 175 ADDVVLLAGGRVKHMTHAMNDVLARSFEDVRATLARGKSRVLVARRPRPEARTAPPSYPV 234 Query: 191 SWKLEGTDW---------------------TIHNHANVFSRTGLDIGARFFMQHLP-ENL 228 + L + + H VF+ LD+G R ++ Sbjct: 235 TATLHDAELLAAARLSLDSRADDGGSGGGIAVVAHGGVFAGAALDLGTRALLRTADRWPD 294 Query: 229 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN 288 + VDLGCG G++ L ++P +VV D S A AS+R N +R + + Sbjct: 295 AADAVDLGCGTGLLATVLALRDPHVRVVATDRSAAAAASARATARANGV--GERVVVLRD 352 Query: 289 NALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFH 348 +A G EP + VLCNPPFH + A++ + A MF A R L+ GEL+ V N L Y Sbjct: 353 DAGQGEEPASADLVLCNPPFHDRAAVSTDAAHRMFAAAARVLRPGGELWCVYNSVLRYRP 412 Query: 349 KLKKIFGNCTTIATNNKFVVLKAVKLGR 376 L++ G ++ + +F V ++V+ R Sbjct: 413 ALERTVGPTEQVSRDPRFTVTRSVRTAR 440 >UniRef50_A0YF73 16S ribosomal RNA m2G1207 methyltransferase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YF73_9GAMM Length = 350 Score = 207 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 63/349 (18%), Positives = 124/349 (35%), Gaps = 20/349 (5%) Query: 33 EYLLQQLDDTEIRGPVL-ILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDE 91 + L ++++ + L ++++ GA + KP + L+ G Sbjct: 7 QLLAKKINAADNSLRALWVVDENIGA--AEITAVKPADHLQVMTNRYDVYRALKTAGFSV 64 Query: 92 SSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTST 151 + D + + +V K A++ + A + + D + Sbjct: 65 -QLSDYDFSPMPASSFDTLYYRVSKEKAVVHHIINAALNCLREGGELFLAGYKSDGIKTY 123 Query: 152 LELFEKVLGPTTTTLAWKKARLINCTF----NEPQLADAPQTVSWKLEGTDWTIHNHANV 207 L +LG K + + +L D + + Sbjct: 124 LTKAAGLLGEMGEKQRGNKTATMAAILCRGGDGERLDDKDYPSQSSIAFAGINFITKPGI 183 Query: 208 FSRTGLDIGARFFMQHLPE------NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDES 261 F +D G++ + L + ++ +VDLGCG G I + + + A + D + Sbjct: 184 FGWNKIDQGSQLLIDQLADEVKLMAHVPETVVDLGCGYGFISV-MASRIVNATFIASDNN 242 Query: 262 PMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWE 321 A+ + N + ++++ + +E + + VLCNPPFHQ + D + + Sbjct: 243 MAAINACTENFRQHGVSG----SVVVDDCAADIE-LKADMVLCNPPFHQGFEVEDQLTEK 297 Query: 322 MFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLK 370 + R L G V NR + K KK F TIA N +F V++ Sbjct: 298 FLRASGRLLNRKGVALFVVNRFIPLERKAKKWFKLVETIADNGRFKVVR 346 >UniRef50_Q11BC2 Methyltransferase small n=2 Tax=Phyllobacteriaceae RepID=Q11BC2_MESSB Length = 336 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 72/335 (21%), Positives = 122/335 (36%), Gaps = 15/335 (4%) Query: 39 LDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLD 98 LD +L+L + G L + + D LA + F Sbjct: 17 LDLPGAGARLLVLGASAG-LRLPETAAEVDVVVDFRPDFLALEKAG-----------FAV 64 Query: 99 STADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKV 158 S L+ + + E +L + V I+A +D S + + Sbjct: 65 SAEVKRNGYDAALLLLGRNRRENEARLAEALRSVHPGGIILAAGMKKDGAQSLRKQVAER 124 Query: 159 LGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGAR 218 L P ++ E AD +S T FS D G+R Sbjct: 125 L-PLENAISKFHGLAFWLRRPERLEADVLSVLSGPAGITPEGYETAVGGFSEGLADPGSR 183 Query: 219 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE 278 F + +LP ++ G++ D G G + L L+++ + ++ S+R N+ P Sbjct: 184 FLIDNLPPDISGKVADFAAGWGFLSLRLVERFSIMATDLYEAHLPSLESARRNLAEQAPG 243 Query: 279 ALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYI 338 C + ++ L+ P R++ +L NPPFH+ A + M A + L G L++ Sbjct: 244 V--NCRYFWHDLLNEPVPHRYDVILMNPPFHRGRAAEPEIGRGMIGAAAKALNPGGRLFL 301 Query: 339 VANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 VANR L Y ++ F IA + + VL K Sbjct: 302 VANRGLPYERIMENAFRQQGEIARDESYKVLWGRK 336 >UniRef50_C5BI28 RNA methyltransferase, RsmC family n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BI28_TERTT Length = 342 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 73/351 (20%), Positives = 126/351 (35%), Gaps = 28/351 (7%) Query: 34 YLLQQLDDTEIRGPVLILNDAF-----GALSCALAEHKPYSIGDSYISELATRENLRLNG 88 Y L + IL++ F G+LS + + D S G Sbjct: 4 YTLLAKQAIHYSHRLWILDENFRTEDAGSLSLTSTDLVMTNRFDVANSSPHL-------G 56 Query: 89 IDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIH 148 + + P + +V K A+ + L + S ++ + D Sbjct: 57 RAATVFSDFNFKEIAEYMPAAICYRVSKERAVTNRVLNQSASRLDSGGMLLLCGEKNDGI 116 Query: 149 TSTLELFEKVLGPTTTTLAWKKARLINCTFNE----PQLADAPQTVSWKLEGTDWT--IH 202 +E K LG K+ L T P D Q +L +D Sbjct: 117 KGYVEKAVKQLGFDGAI--EKQGNLYIATLTRNSREPAPLDDKQYTHLRLINSDVAAAYL 174 Query: 203 NHANVFSRTGLDIGARFFMQHL---PENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVD 259 + V+ +D G+ + + P + G +DLGCG G +G+ LL Q +++ D Sbjct: 175 SKPGVYGWNKIDEGSELLQRSIMDEPVAINGTALDLGCGYGYLGVGLLKAGWQ-QIIATD 233 Query: 260 ESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVA 319 + AV + + N + + + S +E + + V+CNPPFHQ + ++ Sbjct: 234 NNAAAVLACNATLTENGAQ---NFSVVAADCGSSIE-RKADLVVCNPPFHQGFGVESSLT 289 Query: 320 WEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLK 370 +A R LK G V N + + F + T+A N KF V++ Sbjct: 290 NRFVANAARLLKPGGTALFVVNVFIGLERAGAQYFSHQETLANNKKFKVIR 340 >UniRef50_Q28KG1 Methyltransferase small n=1 Tax=Jannaschia sp. CCS1 RepID=Q28KG1_JANSC Length = 336 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 56/345 (16%), Positives = 115/345 (33%), Gaps = 24/345 (6%) Query: 34 YLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESS 93 + G VL++ + +L + E L G Sbjct: 8 LAIDGGALELPDGAVLVMYARADSDFASLGD------VTCMQGFAPDHERLAARG----- 56 Query: 94 VKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLE 153 + L+++ K+ A + + ++ + + + ++ Sbjct: 57 ---VTVVVGADGSFAHALVQITKSRAGTLSAIAEALGHIPPGGLLMVDGQKEEGIEAIVK 113 Query: 154 LFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGL 213 V + +L+ + ++ EG + FS G Sbjct: 114 QLRLVF-EVDHVFSKSHGKLVWLRRPDVIPPQVVDWIAAPEEGAHGYMTV-PGGFSVEGP 171 Query: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAK-VVFVDESPMAVASSRLNV 272 D G+ + +PE L+G + D G G G I +L + + ++ + +++ N+ Sbjct: 172 DRGSEILVALVPE-LKGRVADFGAGWGYIAGEILAEQEGIETFDLIEADHAMLEAAQHNI 230 Query: 273 ETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKI 332 + R F + +++A++CNPPFH ++ A R L Sbjct: 231 DD------PRASFHWADVTRFTPEAQYDAIVCNPPFHTGRRADPSLGRAFIQAASRHLTA 284 Query: 333 NGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRR 377 G ++VANRHL Y LK FG + + + + +A K + Sbjct: 285 RGRFFMVANRHLPYEDTLKTCFGTGSMLGELEGYKIYEAGKPLAK 329 >UniRef50_Q67JT6 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67JT6_SYMTH Length = 206 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 10/203 (4%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCG 238 P +A A + S L G D+ A VFSR +D G+ ++ + ++DLGCG Sbjct: 8 RRPGVAHAETSFSVTLRGMDFRFVTDAGVFSRERVDFGSLLLIEAMEIGPADTVLDLGCG 67 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 G IG+ PQ + V+ + A +R N+E N A+ E + + L V Sbjct: 68 YGPIGIVAARLAPQGFIYMVEINERAAELARRNLEAN---AIANAEVRVGDGLEPVAGIA 124 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF---HKLKKIFG 355 F+AV+ NPP A + + A LK G L++V KL+ +FG Sbjct: 125 FDAVVTNPPIRAGKAT----VYRLLDEAHAALKPGGSLWVVVQNKQGAPSMKRKLEALFG 180 Query: 356 NCTTIATNNKFVVLKAVKLGRRR 378 N +A + VL+A + + + Sbjct: 181 NVEDVARQAGYRVLRARREDKPK 203 Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 44/156 (28%), Gaps = 7/156 (4%) Query: 34 YLLQQLDDTEIRGPVLILNDAFGALSCALAEHKP----YSIGDSYISELATRENLRLNGI 89 LL + + VL L +G + A P Y + + + R NL N I Sbjct: 47 LLLIEAMEIGPADTVLDLGCGYGPIGIVAARLAPQGFIYMVEINERAAELARRNLEANAI 106 Query: 90 DESSVKFLDSTADYPQ-QPGVVLIKVP--KTLALLEQQLRALRKVVTSDTRIIAGAKARD 146 + V+ D V+ P A + + L + + + + Sbjct: 107 ANAEVRVGDGLEPVAGIAFDAVVTNPPIRAGKATVYRLLDEAHAALKPGGSLWVVVQNKQ 166 Query: 147 IHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQ 182 S E + G R++ + Sbjct: 167 GAPSMKRKLEALFGNVEDVARQAGYRVLRARREDKP 202 >UniRef50_C6XLQ7 Methyltransferase small n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XLQ7_HIRBI Length = 308 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 65/287 (22%), Positives = 113/287 (39%), Gaps = 17/287 (5%) Query: 95 KFLDSTADYPQQPGVVL----IKVPKTLALLEQQLRALRKVVTSDTRI-IAGAKARDIHT 149 + +AD + P L I P L + + I + K + Sbjct: 31 PLIPESADIAESPDAALDYFAIAAPAGTQERRFVLAHALRALKPSGEISVIAGKKKGGQR 90 Query: 150 STLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVS--WKLEGTDWTIHNHANV 207 +L ++LG T + KK + I L+ + + + + + + Sbjct: 91 LKADL--ELLGCTHIRIDSKKHQKIASCAPPADLSQVHKAIEENGPQLDEELGLWSQPGI 148 Query: 208 FSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVAS 267 FS D G+ M+HLPE L G DLGCG G++ +L ++ +D A+ Sbjct: 149 FSWNRPDPGSLLLMEHLPE-LSGRGADLGCGLGLLSHHVLQSEAVKSLLLIDIDRRAIEM 207 Query: 268 SRLNVETNMPEALDRCEFMINNALSGVEPFR-FNAVLCNPPFHQQHALTDNVAWEMFHHA 326 + NV +R F+ +A G + + ++ NPPFH + A Sbjct: 208 AHRNVSD------ERISFLWQDARKGPKDITDLDFIVMNPPFHDAGEEDHGLGKAFMARA 261 Query: 327 RRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 L+ G ++VANRHL Y + + F + T A ++ F V++A+K Sbjct: 262 SSMLRKGGICWLVANRHLPYERAINEHFKSFTPKADSHGFKVIEAIK 308 >UniRef50_C5QUQ6 16S rRNA methyltransferase n=3 Tax=Staphylococcus epidermidis RepID=C5QUQ6_STAEP Length = 244 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 14/202 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL----PENLEGEIVD 234 +P + P+ +S++++ + A VFS+ +D G+ ++ P I D Sbjct: 49 EQPDVKSNPKRISYQIKNAQLELTTDAGVFSKDNVDFGSDLLIKTFLKEHPPGPSKTIAD 108 Query: 235 LGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV 294 +GCG G IGL + +P ++ +D + A+A + +N N D + ++ LS V Sbjct: 109 VGCGYGPIGLAIGKVSPHHQITMLDINNRALALAEMNKTKNQV---DNVTIIESDCLSAV 165 Query: 295 EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF---HKLK 351 F+ +L NPP ++ +F A LK GELY+V + K++ Sbjct: 166 NHQCFDYILTNPPIRAGK----DIVHRIFEQAFDRLKTTGELYVVIQKKQGMPSAKKKIE 221 Query: 352 KIFGNCTTIATNNKFVVLKAVK 373 ++FGN IA + + +LK++K Sbjct: 222 ELFGNVEIIAKSKGYYILKSIK 243 >UniRef50_C6ABL9 Ribosomal RNA small subunit methyltransferase C n=5 Tax=Bartonella RepID=C6ABL9_BARGA Length = 342 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 107/282 (37%), Gaps = 11/282 (3%) Query: 96 FLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELF 155 D + + K + L + V + I+ S ++ Sbjct: 68 HCSPQIDKTFSYDGAFLHLSKYRGFNQNCFLDLLECVKPNGWIVISGNKTAGAASMMKWI 127 Query: 156 EKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDW-TIHNHANVFSRTGLD 214 K + P T L+ + PQ + + + T + +FS +D Sbjct: 128 -KTIVPITNKLSKNHGLVFWLQV--PQQIERYNIAQLRSPPLTFGTFQTTSGMFSHGRID 184 Query: 215 IGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDE---SPMAVASSRLN 271 G+ ++P+ + G+ D G G G + L+++ K+ +D A+ +++ + Sbjct: 185 PGSAALASYMPKVISGKTADFGAGWGYLSHVALERSE--KLTALDLYEADYNALRAAKQH 242 Query: 272 VETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLK 331 ++ A F ++ + ++ ++ NPPFH Q ++ +A +CLK Sbjct: 243 LK--SITAPFSIHFYWHDLVHEPITNLYDTIISNPPFHTQQTTDISLGKNFIINAAKCLK 300 Query: 332 INGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 +G L VANRHL Y LK IF + F +++A + Sbjct: 301 PSGSLLFVANRHLPYETLLKNIFRTVLIHEQAHGFKIIEARR 342 >UniRef50_Q21JF1 16S rRNA m(2)G 1207 methyltransferase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21JF1_SACD2 Length = 361 Score = 201 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 55/362 (15%), Positives = 118/362 (32%), Gaps = 27/362 (7%) Query: 30 AADEYLLQQLDDTEI---RGPVL-ILNDAF---GALSCALAEHKPYSIGDSYIS--ELAT 80 A Y + L I++D F +L P + +L Sbjct: 3 AISRYFINYAKQLARHNVNAHFLWIIDDGFHFEPKDFDSLLGIAPSICVTIITNRYDLTL 62 Query: 81 RENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIA 140 N D + Q + +V K ++ L ++ ++ Sbjct: 63 THYASQNEQLHLHFSDFDFSQLNIQGVDAIFYRVSKEKPVVHHVLNNAAAILQPTAALVI 122 Query: 141 GAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGT--- 197 + + + L+ K LG T K+ L N + + Sbjct: 123 AGRKNEGTKTYLDKLSKQLGLNVKT--KKEGELYFGIANAHTTENTSTPLDSSNYNALRE 180 Query: 198 -----DWTIHNHANVFSRTGLDIGARFFMQHLPEN----LEGEIVDLGCGNGVIGLTLLD 248 D + + V+ D+ + + + + E ++DLGCG+G + + + Sbjct: 181 VAICCDLPMQSKPGVYGWKKFDLATQQLIAFIKQRYNNLKEHTVLDLGCGSGYLSIAVKT 240 Query: 249 KNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPF 308 + + D + AV +++ N+ TN + + + ++ ++ F+ V+CNPPF Sbjct: 241 LH-CRSLTATDNNAAAVLATQQNLITNNL--AEAAQVVADDCAQSIQGM-FDLVVCNPPF 296 Query: 309 HQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVV 368 H+ + ++ R L +GE V N + F + + F + Sbjct: 297 HKGFETSRELSDLFLKSTARKLSKSGEALFVVNSFIPLEKLAMPYFKQVEKLQDDKIFKI 356 Query: 369 LK 370 ++ Sbjct: 357 VR 358 >UniRef50_A6DL01 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DL01_9BACT Length = 378 Score = 201 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 61/357 (17%), Positives = 122/357 (34%), Gaps = 24/357 (6%) Query: 30 AADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGI 89 + L+ L + + + + L P D + +EL + Sbjct: 33 PGERDFLKYLPNPLPEKTLFLYGADAPLMPAVLRALSPEMHIDVFTNELHDKRVAEKKYA 92 Query: 90 DESSVKFLDSTA-DYPQQPGVVLIKVPKTLALLEQ--QLRALRKVVTSDTRIIAGAKARD 146 E + L + + +++ K + L L + T + ++ Sbjct: 93 PEHKINVLSGSDLQGDENYDMLVFAPTKYFDRMLFFDTLERLNLIYPKGTALYVVVP-QE 151 Query: 147 IHTSTLELFEKVLGPTTTTLAWKKARLI----NCTFNEPQLADAPQTVSWKLEGTDWTIH 202 + ++ L + + + + + + +D V+ ++T+ Sbjct: 152 RLKDFRKKIDQELKGVKIISSTRSNTVFKTVTRGSDVKKKWSDRIANVAVSTMNAEFTMQ 211 Query: 203 NHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAK------VV 256 VFS D G + + I+DLGCG G+IGL L + AK VV Sbjct: 212 TRPGVFSHGRADTGGVALSEAIDVIPGENILDLGCGAGLIGLALAKRQNDAKPDHGGSVV 271 Query: 257 FVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTD 316 VD + ++ + N+E N E CE + ++ F+ ++ NPP+ Sbjct: 272 LVDSNIRSIECCKKNIEINGFE---NCEAIASDLYE--TEKTFDLIVGNPPYFAGQ---- 322 Query: 317 NVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 + A + L G L IV ++H + ++ K FG TT + + + Sbjct: 323 RIGEYFIETAMKYLNKTGRLAIV-SKHGEQLAEVAKDFGFKTTTIKRKGYDISLCKR 378 >UniRef50_A3JNU9 Methyltransferase, putative n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JNU9_9RHOB Length = 329 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 104/273 (38%), Gaps = 14/273 (5%) Query: 105 QQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTT 164 + L+++ ++ + + RI+ + D S + K LG Sbjct: 69 GDLDMALVQITRSKVETKLLVAQAWDATRVGGRIVVDGQKTDGIESIYKALRK-LGIEPD 127 Query: 165 TLAWKKARLINCTFNE-PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQH 223 TL R+ +E AD + +G VFS LD G+ + Sbjct: 128 TLVKSHGRIFWFERDETRPFADWLEPKLKMPDG----FATAPGVFSAEKLDKGSLALIAA 183 Query: 224 LPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRC 283 LP L G D+G G G + L K+ ++ A+ ++R+N+ +R Sbjct: 184 LP-PLAGHGADIGAGWGFLSRAALGHEKVTKLDLIEAEIAALDAARVNI------IDERA 236 Query: 284 EFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 343 F + ++ ++ NPPFH + ++ A R LK G+ Y VANRH Sbjct: 237 NFEWADVTK-TSGRFYDFIIANPPFHTERTANTDLGVAFLTTAARNLKPKGQFYCVANRH 295 Query: 344 LDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGR 376 L Y L ++F N I + F V +A + R Sbjct: 296 LPYEVVLNELFRNVAEIGGTSAFKVFQAAQPRR 328 >UniRef50_B3PHG8 Putative ribosomal RNA small subunit methyltransferase C n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHG8_CELJU Length = 357 Score = 200 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 67/356 (18%), Positives = 129/356 (36%), Gaps = 24/356 (6%) Query: 29 EAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNG 88 + A +LLQQL + +++ +LA P S + + + G Sbjct: 7 DPAFLWLLQQLQHEPGSNSLWCVDENTTEEWRSLA---PTSHIHVVSNRWDLADAMGQAG 63 Query: 89 IDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIH 148 S+ D V ++ K L+ L + + ++ + + Sbjct: 64 W-HSAFHDFDLRQQAAASLDAVFYRISKEKPLVHHLLNQAWRCLKIGGKLYLSGQKNEGI 122 Query: 149 TSTLELFEKVLGPTTTT----LAWKKARLINCTFNEPQLADAPQTVSWKLEGTD--WTIH 202 + E +LG T LA+ + +L D + ++ + + Sbjct: 123 KTFAEKAADLLGCARQTQKQGLAYSAILTKQGNVTQGRLLDDSDYSTLRVINPESAVPLL 182 Query: 203 NHANVFSRTGLDIGARFFMQHLPENLEG------EIVDLGCGNGVIGLTLLDKNPQAKV- 255 + F D G+RF ++HLP L +DLGCG G + L A + Sbjct: 183 SKPGQFGWNKADQGSRFLLEHLPALLRSEQLAPTTCLDLGCGYGYLTLNASKLPECASIQ 242 Query: 256 --VFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHA 313 + D + A+ S++ NV+ + + + ++ + + + +LCNPPFHQ Sbjct: 243 QWLLTDNNAAALLSAQANVDYHQL----NAQVVGDDCAAHLR-EPLDLILCNPPFHQGFN 297 Query: 314 LTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVL 369 + + + A+R LK G V N+ + K +F +A N F ++ Sbjct: 298 VEGELTGKFIATAQRLLKRGGLALFVVNQFIPLEKKAAGVFRTIKLLADNGSFKLV 353 >UniRef50_Q0FA32 Methyltransferase, putative n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FA32_9RHOB Length = 335 Score = 200 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 111/282 (39%), Gaps = 9/282 (3%) Query: 97 LDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFE 156 L S ++ L+++ ++ + ++ ++ ++ D S L+ Sbjct: 59 LKSLQNFTTINSFALVEITRSKPQSLGLIAKAFDALSENSILMIDGNKTDGIESHLKTLR 118 Query: 157 KVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIG 216 K+ ++ ++ + + A +FS +D Sbjct: 119 KLFKIEG-IISKSHGKIFWIKKATRPQILDQWVQGLEPVKIEKDYKTKAGIFSANHIDKA 177 Query: 217 ARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAK-VVFVDESPMAVASSRLNVETN 275 + ++ LP++L G DLG G G + LL N + K + V+ A+ ++LN+ Sbjct: 178 SSLLLKCLPKHLGGIGADLGAGWGYLSNELLKTNDKIKSICLVEADWNALHCAKLNIND- 236 Query: 276 MPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGE 335 R +F +A + +++ ++ NPPFHQ ++ A L G+ Sbjct: 237 -----SRAKFEWTDATQH-KNVKYDFIIMNPPFHQTRKAEPDIGKSFIIQASELLTPKGQ 290 Query: 336 LYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRR 377 L++VANR L Y L F + +I +F V+ A++ ++ Sbjct: 291 LWMVANRQLAYETTLDTCFTSVNSITETPQFKVINALRPKKQ 332 >UniRef50_Q2BHC0 Probable ribosomal RNA small subunit methyltransferase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHC0_9GAMM Length = 346 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 55/325 (16%), Positives = 110/325 (33%), Gaps = 22/325 (6%) Query: 57 ALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPK 116 LS L+ + + I A LN + D + ++ +V K Sbjct: 28 LLSAQLSPSDNIQVITNRIDLEARL----LNQGWKVFFSDYDFSIIEDNSLDSIIYRVSK 83 Query: 117 TLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKA----- 171 ++ + + + ++I + + +K+ G + A K Sbjct: 84 EKPVVHHVINESYRCLKPGGQLIMAGDKGEGIKTYFSKGKKLFGDGQSVKATKDIWQVTL 143 Query: 172 RLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLP------ 225 + EP T+ + + ++ VF +D G+ F ++HL Sbjct: 144 HKLKSDKAEPLDDKDYPTLRVTVADEQFDYYSKPGVFGWDKVDKGSAFLIEHLDQFLMTL 203 Query: 226 ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEF 285 +DLGCG G + L + V D + A+ + + N + + Sbjct: 204 PEPPKNALDLGCGYGYLSLNISQL--DIPVTASDNNAAAILACQRNFDRYPING----KV 257 Query: 286 MINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLD 345 + + G+ +F+ ++CNPPFH ++ ++ L G V N H+ Sbjct: 258 IPASCAEGIS-EKFDLIICNPPFHAGFSVDGDLTDRFLKATHDRLNERGVACFVTNLHIP 316 Query: 346 YFHKLKKIFGNCTTIATNNKFVVLK 370 K + F IA N F +++ Sbjct: 317 LERKALQYFHQAECIAANGNFKLVR 341 >UniRef50_A3DJK4 Methyltransferase small n=3 Tax=Clostridium thermocellum RepID=A3DJK4_CLOTH Length = 196 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 12/198 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCG 238 P T+S+ ++ + A VFS+ +D G+ ++ +P L+G I+D+GCG Sbjct: 7 QNPDTPHDVSTISYTVKDRVIKFNTDAGVFSKRRVDFGSDLLIRSVP-PLDGSILDIGCG 65 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 GVIG++L NP + V +D + AV + N+ N + ++ S V + Sbjct: 66 YGVIGISLALLNPSSFVTMIDINERAVDLASQNIHLNGV---TNATALTSDGFSNVSD-K 121 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK---LKKIFG 355 F+A++ NPP V + +F + L G +Y+V + LK ++G Sbjct: 122 FDAIVSNPPIRAGKK----VIYPIFADSINHLNPGGSIYLVIQKKQGANSAIEFLKSVYG 177 Query: 356 NCTTIATNNKFVVLKAVK 373 NC I + ++K+ K Sbjct: 178 NCEVINKKAGYWIMKSTK 195 >UniRef50_A5IQ95 16S rRNA m(2)G 1207 methyltransferase n=53 Tax=Staphylococcus RepID=A5IQ95_STAA9 Length = 202 Score = 196 bits (500), Expect = 9e-49, Method: Composition-based stats. Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 14/202 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL----PENLEGEIVD 234 +P + Q + ++L + VFS+ +D G+ +Q P I D Sbjct: 7 EDPSVISNEQRIQYQLNHHKIDLITDNGVFSKDKVDYGSDVLVQTFLKAHPPGPSKRIAD 66 Query: 235 LGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV 294 +GCG G IGL + +P + +D + A+A N + N +D ++ALS V Sbjct: 67 VGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVEKNKKLNG---IDNVIVKESDALSAV 123 Query: 295 EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF---HKLK 351 E F+ +L NPP +F A L NGEL++V + ++ Sbjct: 124 EDKSFDFILTNPPIRAGKET----VHRIFEQALHRLDSNGELFVVIQKKQGMPSAKKRMN 179 Query: 352 KIFGNCTTIATNNKFVVLKAVK 373 ++FGN + + + +L+++K Sbjct: 180 ELFGNVEVVNKDKGYYILRSIK 201 >UniRef50_Q1IXW7 rRNA (Guanine-N(2)-)-methyltransferase n=3 Tax=Deinococcus RepID=Q1IXW7_DEIGD Length = 407 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 71/357 (19%), Positives = 120/357 (33%), Gaps = 24/357 (6%) Query: 29 EAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNG 88 + A L + +RG VL L+ G L+ P + A L G Sbjct: 65 DPAQALLAWLMRKDRVRGEVLDLSALGGLLA-----SLPGVTLRAVEGSAAALTVLARAG 119 Query: 89 IDE-SSVKFLDSTADYPQQPGVVLIKVP--KTLALLEQQLRALRKVVTSDTRIIAGAKAR 145 +D ++ D +A +P++ V + + + A Q+ + Sbjct: 120 LDAFAAAPGDDLSARWPERARTVALVLAGDRGNAYALSQVAWAHACTPPGGTLYLAGDRD 179 Query: 146 DIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHA 205 + + G T R+ E + Sbjct: 180 KGFDRYVRAAARAFGTGETIARDGGMRV--AKLVRRPGPTPAYPDPEGYEAFGVKVVGLP 237 Query: 206 NVFSRTGLDIGARFFMQHLP-------ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFV 258 VFS D + L + ++DLGCG G++G + A+V V Sbjct: 238 GVFSAAKPDKATTLLLGTLEALDLTELDLTGKRVLDLGCGTGLMGAWAARR--GAQVTLV 295 Query: 259 DESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNV 318 D +V S++ + N + +++ + + F+ +L NPPFH + +V Sbjct: 296 DGDLQSVRSAQATLAANGLSG----DVFLSDVDAALGERTFDVILTNPPFHVGRGVVLDV 351 Query: 319 AWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLG 375 A E A R L G LY+VAN L Y L+ + G + F VL A + G Sbjct: 352 AREFIAAAGRRLNPGGTLYLVANEPLPYETPLRSL-GELRALRREGDFKVLAATRAG 407 Score = 49.1 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 54/193 (27%), Gaps = 20/193 (10%) Query: 186 APQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL-EGEIVDLGCGNGVIGL 244 + V +D + ++ GE++DL +G Sbjct: 37 EVRPARLGPRLEGLYALTKPGVRGFPEVDPAQALLAWLMRKDRVRGEVLDL----SALGG 92 Query: 245 TLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLC 304 L P + V+ S A+ + +A + LS P R V Sbjct: 93 LLAS-LPGVTLRAVEGSAAALTV----LARAGLDAFAAA---PGDDLSARWPERARTVA- 143 Query: 305 NPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR---HLDYFHKLKKIFGNCTTIA 361 + A A C G LY+ +R Y + FG TIA Sbjct: 144 ---LVLAGDRGNAYALSQVAWAHACTPPGGTLYLAGDRDKGFDRYVRAAARAFGTGETIA 200 Query: 362 TNNKFVVLKAVKL 374 + V K V+ Sbjct: 201 RDGGMRVAKLVRR 213 >UniRef50_Q72L94 Ribosomal RNA small subunit methyltransferase C n=6 Tax=Thermaceae RepID=Q72L94_THET2 Length = 375 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 79/388 (20%), Positives = 147/388 (37%), Gaps = 35/388 (9%) Query: 1 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSC 60 ++ L + L ++ P + + L + ++ R L LN G S Sbjct: 11 LTPLPHPGGRLFIK--PGARGYR-----DPVHDLLQKTVEPFGERA--LDLNPGVGWGSL 61 Query: 61 ALA-EHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVP--KT 117 L + + S + + + +V++ +P + Sbjct: 62 PLEGKMAVERLETSRAAFRCLTASGLQARLALPW-------EAAAGAYDLVVLALPAGRG 114 Query: 118 LALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKAR--LIN 175 A ++ L A + + R+ + +LG R L+ Sbjct: 115 TAYVQASLVAAARALRMGGRLYLAGDKNKGFERYFKEARALLGYGVVVRREGPYRVALLE 174 Query: 176 CTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL-----PENLEG 230 P L + S ++ G ++T H+ VFS +D + ++ L PE + G Sbjct: 175 KEKEAPPLPSLWRAFSARILGAEYTFHHLPGVFSAGKVDPASLLLLEALQERLGPEGVRG 234 Query: 231 E-IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINN 289 ++DLG G G + L L A+VV V++ +V S + +E N +A + + ++ Sbjct: 235 RQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKA----QALHSD 288 Query: 290 ALSGVEPF-RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFH 348 + RF+ ++ NPPFH A+ +VA A L+ G ++V+N L Y Sbjct: 289 VDEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVDVAAARLRPGGVFFLVSNPFLKYEP 348 Query: 349 KLKKIFGNCTTIATNNKFVVLKAVKLGR 376 L++ FG T+ ++ VL A K GR Sbjct: 349 LLEEKFGAFQTL-KVAEYKVLFAEKRGR 375 >UniRef50_Q2W4E3 16S RNA G1207 methylase RsmC n=3 Tax=Magnetospirillum RepID=Q2W4E3_MAGSA Length = 314 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 105/280 (37%), Gaps = 11/280 (3%) Query: 97 LDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFE 156 ++ A + L+ + K A L ++ ++ S E Sbjct: 35 FETVARLEGRFAAGLVLLTKHKAENRANLARAWGLLEPGGVLVCCGANALGAASHEREAE 94 Query: 157 KVLGPTTTTLAWKKARLIN---CTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGL 213 +V G +L+ +AR T + P + + A FS + Sbjct: 95 RVFGLAG-SLSKHQARTFWMVRGTDSPPADCAEWLAAAEPRPVEGCGLVARAGCFSSDHV 153 Query: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAK-VVFVDESPMAVASSRLNV 272 D G+R + LPE L G DLG G G + +L + P+ + + +A+ +R N Sbjct: 154 DKGSRLLLDCLPEGLAGRGADLGAGWGYLSAEILRRFPEVTDIDLFEAEALALEDARSN- 212 Query: 273 ETNMPEALDRCEFMINNALSGVEP-FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLK 331 ++ F + +G+ ++ ++ NPPFH+ + A + ++ Sbjct: 213 ----LGGSEKAAFHWLDVGAGLPKCEPYDWIVSNPPFHEGRKADPAIGQGFITAAWKAIR 268 Query: 332 INGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 G+ +VANR L Y +L++ F T + + F V A Sbjct: 269 RRGKFILVANRSLPYEAELRRRFREVTLLREADGFKVYLA 308 >UniRef50_C1A9K7 rRNA methyltransferase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9K7_GEMAT Length = 447 Score = 194 bits (493), Expect = 6e-48, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 94/288 (32%), Gaps = 21/288 (7%) Query: 103 YPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPT 162 +V I++P ++ + +++ + + S +L + V G Sbjct: 163 ADGSVALVTIRIPTDRIGVQLAVAEAFRMLAVGGVCLLAGANDEGAKSAAKLLQAVFGEA 222 Query: 163 TTTLAWKKARLINCTFNEPQLADA-----PQTVSWKLEGTDWTIH------------NHA 205 T R++ + D P Sbjct: 223 TVEAQHSGHRMVRAVKRHDRAGDHAIFALPWLDLGHFHAVPVQFAGNGNPALAFRQFTRP 282 Query: 206 NVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAV 265 VFS LD + ++DLGCG G +G+ ++ V+ AV Sbjct: 283 GVFSWEHLDEATVLLADVMNIRRGDRVLDLGCGAGALGVVASIRSGVPAVLAD-ADADAV 341 Query: 266 ASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHH 325 ++ + ++ S VE F+ V+ NPPFH ++ V Sbjct: 342 RGAQRTAREAGV---PDVRVLASDVASAVEDQAFDVVVSNPPFHVGKSIDLTVPRAFIDD 398 Query: 326 ARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 A R L G LYIVANR L Y + FG T +F VL AV+ Sbjct: 399 AWRTLAPGGRLYIVANRTLPYERLIDARFGEVRTAHDGRRFKVLGAVR 446 >UniRef50_A3V764 Methyltransferase, putative n=3 Tax=Rhodobacterales RepID=A3V764_9RHOB Length = 323 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 65/272 (23%), Positives = 107/272 (39%), Gaps = 14/272 (5%) Query: 105 QQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTT 164 ++ VP+ A + + + + + ++ + D S + K LG Sbjct: 66 APCETAIVVVPRAKAQAQ---AMIAQACATASLVVVDGQRTDGVDSLFKACRKRLGDI-A 121 Query: 165 TLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL 224 ++ RL AD T + A VFS +D G+ Q L Sbjct: 122 SITKGHGRLFWFPATTA-FADWAATGPVQGPHG---FFTAAGVFSDGAVDAGSALLAQAL 177 Query: 225 PENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCE 284 P L + DLG G G + +L ++ A + ++ +++ +RLNV R Sbjct: 178 PPKLPARMADLGAGWGYLAQAVLARDSVASLDLIEAEALSLQCARLNVTD------PRAR 231 Query: 285 FMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL 344 F +AL ++ ++ NPPFH A + A R L +G+L++VANRHL Sbjct: 232 FHWADALRFTPDKAYDGIVMNPPFHVGRAADAGLGRAFIQAASRLLAPHGKLWMVANRHL 291 Query: 345 DYFHKLKKIFGNCTTIATNNKFVVLKAVKLGR 376 Y + + F N I NN F + A K R Sbjct: 292 PYEQAMSENFRNVDIIGGNNAFKLFHATKPTR 323 >UniRef50_B5KCF3 Possible ribosomal RNA small subunit methyltransferase C RsmC n=2 Tax=Octadecabacter antarcticus RepID=B5KCF3_9RHOB Length = 337 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 74/355 (20%), Positives = 121/355 (34%), Gaps = 41/355 (11%) Query: 27 AWEAA-----DEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATR 81 AW A + ++ G + IL G L++ S Sbjct: 19 AWPARFIMKYSRLFTALDEGLDLTGTLHILRPPAGYDLAGLSDVSVESTF---------- 68 Query: 82 ENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAG 141 + G L+ VP++ L + + + +I Sbjct: 69 -------YPDHQYWQAMGMVGDGTGRGATLLVVPRSKTLARAMISDA---IAAGGLVIVD 118 Query: 142 AKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTI 201 + D + K +A RL F D TV+ Sbjct: 119 GQKTDGIEGIYKDVRKT-NTIMGVVAKGHGRLFW--FEAGTAPDWDVTVTSPDG-----Y 170 Query: 202 HNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDES 261 A VFS T +DIG+ + HL L+G++ DLG G G + +L ++ ++ Sbjct: 171 KTVAGVFSETKIDIGSSQLVPHLDA-LKGDVADLGAGWGFLSREILTHEGVTRLDMIEAD 229 Query: 262 PMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWE 321 +A+ + LN R + +AL+ ++ V+ NPPFH A ++ Sbjct: 230 KVALDCAVLN------TNDARARPVWTDALT-FSGGPYDVVVSNPPFHTIRAGDPDLGKG 282 Query: 322 MFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGR 376 A R LK G L +VANRHL Y +L F +A F + +A + R Sbjct: 283 FIATAARILKPRGALLMVANRHLPYEAELDAKFARVEELAGTGAFKIFRATRPKR 337 >UniRef50_Q58292 Protein MJ0882 n=11 Tax=Methanococcales RepID=Y882_METJA Length = 197 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 10/198 (5%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCG 238 +P + V L G + VFS +D G + ++++ + + +I+DLGCG Sbjct: 6 EKPTTKSDVKIVEDILRGKKLKFKTDSGVFSYGKVDKGTKILVENVVVDKDDDILDLGCG 65 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 GVIG+ L D+ D + A+ ++ N++ N + D + ++ V+ + Sbjct: 66 YGVIGIALADEVKST--TMADINRRAIKLAKENIKLNNLDNYD-IRVVHSDLYENVKDRK 122 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK---LKKIFG 355 +N ++ NPP V + + LK NGE+++V +K +FG Sbjct: 123 YNKIITNPPIRAGKE----VLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFG 178 Query: 356 NCTTIATNNKFVVLKAVK 373 N T+ + VLK+ K Sbjct: 179 NVETVTIKGGYRVLKSKK 196 Score = 43.7 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 51/138 (36%), Gaps = 7/138 (5%) Query: 48 VLILNDAFGALSCALAEHKPYSIGDS--YISELATRENLRLNGIDESSVKFLDSTA---D 102 +L L +G + ALA+ + + +EN++LN +D ++ + S Sbjct: 59 ILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV 118 Query: 103 YPQQPGVVLIKVP--KTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLG 160 ++ ++ P +L + + ++++ + I + + S + + V G Sbjct: 119 KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFG 178 Query: 161 PTTTTLAWKKARLINCTF 178 T R++ Sbjct: 179 NVETVTIKGGYRVLKSKK 196 >UniRef50_A1B2V8 Methyltransferase small n=8 Tax=Rhodobacterales RepID=A1B2V8_PARDP Length = 344 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 65/333 (19%), Positives = 110/333 (33%), Gaps = 21/333 (6%) Query: 44 IRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADY 103 +G +L++ + + Y A + LD + Sbjct: 15 PQGRMLLIGAGAATDLSVFDPERVQIVQGFYPDHRALEA------------RGLDVVTEA 62 Query: 104 PQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTT 163 ++ +P+ A ++ + + + D + L+ + L Sbjct: 63 SGDFDAAVVFLPRARAEARARIADAAARLAPGASLWIDGQKTDGVDAVLKEM-RGLAAVD 121 Query: 164 TTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQH 223 + ++ T E VFS G D ++ Sbjct: 122 EVQSRAHGKIFRVTLPEAGWLPEGWAARDHEAAPGM--VTRPGVFSADGPDPASQALAAA 179 Query: 224 LPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRC 283 LPE L IVDLG G G + +L + V+ A+ +R N+ R Sbjct: 180 LPEKLPTRIVDLGAGWGWLSAEILRHPGVELLHLVEADAAALDCARRNIAD------PRA 233 Query: 284 EFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 343 F +AL P N V+ NPPFH+ A + A L G L++VANRH Sbjct: 234 RFHWADALDFRLPEPVNGVIMNPPFHEGRAADPKLGAGFIRAAAGLLTGAGRLWMVANRH 293 Query: 344 LDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGR 376 L Y L++ F + + N++F +L A R Sbjct: 294 LPYEQALRECFAEVSELGGNSRFKILTASGARR 326 >UniRef50_B9Y2U0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2U0_9FIRM Length = 203 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 13/208 (6%) Query: 172 RLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL-EG 230 R+ + + QL + +S++ G + VF ++ +D G+ ++ + E Sbjct: 5 RMSHYFTDNRQLPQNRKEISFRFSGFIIPLITDNGVFCKSEVDFGSYVLLKTIKEEPLGD 64 Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 I+DLGCG GVIG+T+ P A+++ VD +P AV + LN + N EA R + N Sbjct: 65 HILDLGCGYGVIGVTVKKMFPDAEMLMVDVNPRAVELAVLNAQKNSVEAEVRVSDIFGNV 124 Query: 291 LSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH---LDYF 347 + +L NPP V + MF A L+ G LY+V + L Sbjct: 125 TETLSD-----ILTNPPIRAGKK----VIYAMFEQAYDHLRPQGHLYVVIRKQQGALSAK 175 Query: 348 HKLKKIFGNCTTIATNNKFVVLKAVKLG 375 K+++IFGNC I + +LK+ K Sbjct: 176 AKIEEIFGNCEVINKEKGYYILKSTKTD 203 >UniRef50_A4WPY7 16S rRNA m(2)G 1207 methyltransferase n=5 Tax=Rhodobacteraceae RepID=A4WPY7_RHOS5 Length = 333 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 62/275 (22%), Positives = 105/275 (38%), Gaps = 12/275 (4%) Query: 102 DYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGP 161 ++ +P+ A L V I+ + D + + L Sbjct: 65 AGGSGHAAAVVCLPRARAEARALLAEATAAVEPGGLIVVDGQKTDGIEAVWRDLAERLA- 123 Query: 162 TTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFM 221 + TL+ +L EP L D + +FS D G++ + Sbjct: 124 VSATLSKAHGKLF-TLAAEPGLEDWA----ARPAEIVGGFRTLPGIFSADAPDRGSQLLL 178 Query: 222 QHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALD 281 + LP +L G +VDLG G G + +L + ++ V+ A+ +RLN+ + Sbjct: 179 EALPADLSGRVVDLGAGWGFLARAVLGRRAVKRIDLVEAEHAALDCARLNITD------E 232 Query: 282 RCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 341 R F +A + V+CNPPFH + A R L +G L++VAN Sbjct: 233 RAHFHWADATRFRLSKPADVVVCNPPFHTTREADPTLGMGFLQAAARLLAPSGLLWLVAN 292 Query: 342 RHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGR 376 RHL Y L+ +F I + F +++A + R Sbjct: 293 RHLPYDRGLRALFREVEEIGGDAAFRIVRAARPQR 327 >UniRef50_Q8TXG5 16S rRNA G1207 methylase n=1 Tax=Methanopyrus kandleri RepID=Q8TXG5_METKA Length = 199 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 80/194 (41%), Gaps = 9/194 (4%) Query: 181 PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG 240 + + ++ G ++ VFS +D G + +++ ++DLGCG G Sbjct: 10 KPSREELGMIIARIRGREYRFLTAPGVFSWRRIDPGTQLLAENMDLEGVHSVLDLGCGYG 69 Query: 241 VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFN 300 V+G+ + + VV D + A+ + N N E D E + VE F+ Sbjct: 70 VLGIVAAKELGEGHVVMTDVNRRAIWLANENRRLNDVE--DITEVREGSLYDPVEDEEFD 127 Query: 301 AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKK---IFGNC 357 ++ NPP + ++ + A L +GEL++V R + L + +FG+ Sbjct: 128 RIVSNPPIREG----LDLVLRIVREAPNHLTEDGELWLVVRRKMGSKRILSEMRTVFGSA 183 Query: 358 TTIATNNKFVVLKA 371 A + VL+A Sbjct: 184 EVAARGGGYWVLRA 197 >UniRef50_P37872 Uncharacterized protein ybxB n=163 Tax=cellular organisms RepID=YBXB_BACSU Length = 201 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 12/200 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL-EGEIVDLGC 237 +P + QT S++L D+T + + VFS+ +D G+R + E EG I+D+GC Sbjct: 8 EKPSVKSNKQTWSFRLRNKDFTFTSDSGVFSKKEVDFGSRLLIDSFEEPEVEGGILDVGC 67 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV-EP 296 G G IGL+L + +D + AV S N E N + + ++ S V Sbjct: 68 GYGPIGLSLASDFKDRTIHMIDVNERAVELSNENAEQNG---ITNVKIYQSDLFSNVDSA 124 Query: 297 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF---HKLKKI 353 F ++L NPP V +F + LK +GEL+IV + KL+++ Sbjct: 125 QTFASILTNPPIRAGKK----VVHAIFEKSAEHLKASGELWIVIQKKQGAPSAIEKLEEL 180 Query: 354 FGNCTTIATNNKFVVLKAVK 373 F + + + ++KA K Sbjct: 181 FDEVSVVQKKKGYYIIKAKK 200 >UniRef50_A8R9R0 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R9R0_9FIRM Length = 198 Score = 190 bits (483), Expect = 8e-47, Method: Composition-based stats. Identities = 50/200 (25%), Positives = 97/200 (48%), Gaps = 13/200 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL--PENLEGEIVDLG 236 + L + + ++++ D++ VFS+ +D G + ++ + E L ++DLG Sbjct: 7 DNRHLKENRKEITFRFWCFDYSFITDNGVFSKEAIDYGTQVLLKTICEREELGERVLDLG 66 Query: 237 CGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 296 CG G +G+ L P +D +P AV ++ N+ N EA + ++N + Sbjct: 67 CGYGPVGVVLKKIYPTKAFEMIDVNPRAVQLAKENICRNQLEA----DVHVSNIYEDLHQ 122 Query: 297 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF---HKLKKI 353 ++ ++ NPP A V + MF A + L++ G+L++V + K+K + Sbjct: 123 ESYSDIITNPPIRAGKA----VIYTMFEEAYQHLELGGKLWVVIRKQQGAPSAVKKIKDV 178 Query: 354 FGNCTTIATNNKFVVLKAVK 373 FGNC I ++ + +LKA+K Sbjct: 179 FGNCEIIKRDSGYYILKAIK 198 >UniRef50_Q02YD3 16S RNA G1207 methylase RsmC n=110 Tax=Bacilli RepID=Q02YD3_LACLS Length = 227 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 12/198 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCG 238 + L+ QT++ L G VFS+ G+D G+R ++ ++D+GCG Sbjct: 39 DNQDLSHDFQTLTVDLLGLSMRFKTDRGVFSKNGIDYGSRVLLEDYQPEGAKTLLDVGCG 98 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 G +GLTL K V VD + A+ R N N E ++N V + Sbjct: 99 YGTLGLTLAKKF-DLSVTMVDVNSRALDLCRQNAIDNAVS---NTEIELSNIYEAVS-EK 153 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF---HKLKKIFG 355 ++A++ NPP V E+ A L G L IV + K++++FG Sbjct: 154 YDAIISNPPIRAGKE----VVHEILTGAFDYLNDGGHLTIVIQKKQGAPSAQRKMEEVFG 209 Query: 356 NCTTIATNNKFVVLKAVK 373 NC +A + + +L++ K Sbjct: 210 NCQLVARDKGYFILRSYK 227 >UniRef50_B6YSP9 Ribosomal RNA small subunit methyltransferase C n=5 Tax=Thermococcus RepID=B6YSP9_THEON Length = 209 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 44/196 (22%), Positives = 80/196 (40%), Gaps = 12/196 (6%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGN 239 EP + +T+ L G + + VFS LD G ++ + + ++DLGCG Sbjct: 22 EPNVPLKTKTIEVCLRGHCFKFITASGVFSFGKLDRGTELLIESMILDGNWRVLDLGCGY 81 Query: 240 GVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRF 299 G IG+ + + + VV D + AV+ +R N++ N E + V +F Sbjct: 82 GAIGI-VASRFVE-YVVMTDVNRRAVSIARKNLKINNV---RNAEVRWGSLYEPVRGEKF 136 Query: 300 NAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY---FHKLKKIFGN 356 + ++ NPP H + E+ +A R L G L +V +++ F Sbjct: 137 DTIITNPPVHAGKE----ILREIVINAPRHLNDGGLLQLVIKTKQGAKYIKGLMEEHFTE 192 Query: 357 CTTIATNNKFVVLKAV 372 +A + + V + Sbjct: 193 VRELAKGSGYRVYAGI 208 >UniRef50_Q89AI2 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=RSMC_BUCBP Length = 326 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 109/268 (40%), Gaps = 7/268 (2%) Query: 105 QQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTT 164 Q V++ P + Q+ + +++ +I R L +K + T Sbjct: 59 QNSDVIIYIWPNSKLEALFQINYIISLLSKTQKIFFLGSNRSGIKCIQNLLKKWII-ITK 117 Query: 165 TLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL 224 + L + + + + + + VFS +D G + M Sbjct: 118 IDSSNHCILYSGIIVLKPIFLYENFIKFNKWN-NIVVKTIPGVFSYNNIDHGTKLLMSTC 176 Query: 225 PENLEGE-IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRC 283 +NL + ++D+GCG+GV+ L P+ K+ +D + A+ SS+L + +N Sbjct: 177 TKNLRWKTVLDIGCGSGVLSTYLATIFPEIKLTLIDSNIAALESSKLTLTSNNVCG---- 232 Query: 284 EFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 343 E +N S V F+ ++ NPP H ++ L ++ + ++ + L GE+ IV ++ Sbjct: 233 EIFPSNIYSNVHYQNFDLIISNPPLHVENKLNFSIIDNIIKNSVKYLSNKGEIRIVTLKN 292 Query: 344 LDYFHKLKKIFGNCTTIATNNKFVVLKA 371 + F T + T++ + V +A Sbjct: 293 VPCHKSFTLYFKKYTILKTSSHYKVYQA 320 >UniRef50_C0XSD5 Possible methyltransferase small n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XSD5_9CORY Length = 318 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 79/340 (23%), Positives = 134/340 (39%), Gaps = 31/340 (9%) Query: 35 LLQQLDDTEIRGPVLILNDAFG-ALSCALAEHKPYSIGDS-YISELATRENLRLNGIDES 92 L+ ++I ND G L+ A+ K DS ++ A + L D Sbjct: 7 LIWSTAPVAEAETIMICNDPTGDLLTAAVDTGKRVVCVDSDFVRCRAAGDAGALVAGD-- 64 Query: 93 SVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTL 152 + LD+ V + ++PK+L L+ R++ ++ GA + + S Sbjct: 65 --RRLDAYLAGSSGSAVAVGEMPKSLGRLDYLARSIAGAGFDQVTMVLGANNKHLARSMN 122 Query: 153 ELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTG 212 + + +L K R + +A P+ V++ + + VFS T Sbjct: 123 TVLGESFTDVAASLGRGKFRCL--------VASGPKPVTYT-PASSRELVAIGGVFSGTK 173 Query: 213 LDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNV 272 D+G LP +L G +DLGCGNG + L Q V+ D AV S+R Sbjct: 174 PDLGGELLRASLPASL-GRYLDLGCGNGSVSRGL-----QGAVMATDSDADAVLSARA-- 225 Query: 273 ETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKI 332 ++A S + F+ + NPPFH + + + A R L Sbjct: 226 --------IGLHVTWDDAGSALADSSFDTIALNPPFHDGTTVDATLVQHLLDAAARLLAP 277 Query: 333 NGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAV 372 G LY+V N HL Y ++++ F +A + ++ VL+A Sbjct: 278 GGSLYLVHNSHLRYRAEVERRFDAVEEVARDARYTVLRAR 317 >UniRef50_D2R2V9 Methyltransferase small n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R2V9_9PLAN Length = 336 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 71/343 (20%), Positives = 132/343 (38%), Gaps = 22/343 (6%) Query: 42 TEIRGPVLILND-AFGALSCALAEHKPYSIGDSYISEL-ATRENLRLNGIDESSVKFLDS 99 + +I N G L+ A AE P + + ++ ++ + + Sbjct: 7 PTLPAVAMIANTVGRGQLAAAFAEQNPDVPVTLFHVDAFHAEQSRVTYFPAPGKLEIVLA 66 Query: 100 TADYPQQPGVV--LIKVPKTLALLEQQLRALRKVVTSDTRIIAGA---KARDIHTSTLEL 154 + + G+ L+++ L+ L++ + ++IA K + +H LEL Sbjct: 67 SDPPVGEVGLAAMLVELHGEAELVRDLLQSFHDRLAIGGQLIAATDHPKDQWLHEQLLEL 126 Query: 155 FEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTD--WTIHNHANVFSRTG 212 F KV T L K+ + T P + D + VF+ Sbjct: 127 FPKV-----TRLPQKRGVVYRATKQAPLKKHRSFVAQFPCRDGDHLLQLQTRPGVFNHRS 181 Query: 213 LDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNV 272 +D GAR + + ++D+GCG GV+GL + + P A V+ +D A+ ++ + Sbjct: 182 VDAGARALLSAVEVRAGESVLDIGCGCGVVGLVICKRLPTATVLAIDSHSRAIECTQASA 241 Query: 273 ETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKI 332 E N + ++ + V F+ V NPP+ +A A R LK Sbjct: 242 ERNEL---PQLTARLDPSHKSVPDASFDVVAMNPPYFS----NFRIAELFLQTATRALKP 294 Query: 333 NGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLG 375 G LY V Y +LK+ + N + N ++V++A + Sbjct: 295 GGRLYSVTKTPEWYLERLKEGWTNVEAVPVKN-YIVVRAERSK 336 >UniRef50_UPI000051043F putative methyltransferase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000051043F Length = 406 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 133/349 (38%), Gaps = 31/349 (8%) Query: 42 TEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTA 101 E+ +LI++DA G S L+E P + I E T + + S Sbjct: 68 AELPHEILIVDDAQGLQSRLLSEIAPVRTYNDRIDEAHTLAEVADRTSPIDDLAAFASDR 127 Query: 102 DYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGP 161 + ++ PK L + + A++ V+ +I ++ + + + + Sbjct: 128 NEV----WAIVNAPKATHALAETIAAIQSDVS---TVIVIGRSDSMSRAVNKELARGYAR 180 Query: 162 TTTTLAWKKARLINC--TFNEPQLADAPQTVSWKLEGTD-WTIHNHANVFSRTGLDIGAR 218 + K R+I + P L P+ + T + H FS D G+ Sbjct: 181 VDVSPGVGKHRMIIGSRRLSSPSLPSYPRRGTIDHPATGVLQVRAHGACFSGIKSDEGST 240 Query: 219 FFMQHLPENLEG--------------EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMA 264 + L + I+DLGCGNG + + VD S A Sbjct: 241 ALLTALSSETKPAESQPAEAVTGSPNSILDLGCGNGWLLTAAMQVTAAKNGTGVDVSKAA 300 Query: 265 VASSRLNVETNMPEALDRCEFMINNALS--GVEPFRFNAVLCNPPFHQQHALTDNVAWEM 322 V S+R E N E + ++ +A + + +L NPPFHQ + + A + Sbjct: 301 VTSARETAEANGLE----VDTILADATDVQALSGGH-DLILLNPPFHQGTTIETDTAAGL 355 Query: 323 FHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 A + L G+++ V N HLDY L+++ G +A +KF V+++ Sbjct: 356 MATASKLLAPGGQVFTVYNSHLDYRATLERVIGPSEQLARTSKFTVIRS 404 >UniRef50_UPI00016C52FC methyltransferase small n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C52FC Length = 348 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 78/337 (23%), Positives = 123/337 (36%), Gaps = 20/337 (5%) Query: 46 GPVLI-LNDAFGALSCALAEHKPYSIGDSYISELA----TRENLRLNGIDESSVKFLDST 100 PVLI + + + A + P + +L RE L G V D Sbjct: 17 PPVLIAVGPPWPVANLVKALNLPETEVTCAQLDLHQTDRVRETLAEVGASAEVVTVAD-M 75 Query: 101 ADYPQQPGVVLIKVPKT--LALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKV 158 D PQ+ G V+ L + V+T + ++ + + +L +K+ Sbjct: 76 WDLPQRFGTVIFPASSQADRELKLDIVEQAAHVLTVGGLFLTLSEY-ERDSQFAKLQKKI 134 Query: 159 LGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKL---EGTDWTIHNHANVFSRTGLDI 215 G T A + T E + V + G + FS D Sbjct: 135 FGKCGETPASENGMAFFSTKAEESGSRRRHEVKYHAKIGAGASMEFVSRPGTFSYGRFDA 194 Query: 216 GARFFMQHLPENLEGEIVDLGCGNGVIG-LTLLDKNPQAKVVFVDESPMAVASSRLNVET 274 G+R ++ ++DLGCGNG +G L P A+V F+D S A+A + LN + Sbjct: 195 GSRAMLEVAEIRPGDTVLDLGCGNGAVGCLAGAMAGPDARVTFIDSSLRAIALAELNAKA 254 Query: 275 NMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKING 334 N F+ L G+E +F+ +L NPP++ + AR LK G Sbjct: 255 NGV---TNTRFVNATRLQGLEEDKFDVILANPPYYA----KSEITRLFIEGARDLLKPGG 307 Query: 335 ELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKA 371 Y+V + FG+C+ I VVL Sbjct: 308 RYYLVTKMPTAVMPLIFDTFGDCSVIENRGYAVVLSG 344 >UniRef50_D2MPQ8 Methyltransferase small domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MPQ8_9FIRM Length = 197 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 13/197 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL-PENLEGEIVDLGC 237 N L P + + T + VFS+ LD G+ +Q L E+L G+ +D+GC Sbjct: 9 NNEDLLSKPIEYQYTIREKTLTFQSDLGVFSKNKLDFGSHVLIQTLLQEDLSGKGLDMGC 68 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G G IG+++L ++ + ++ VD + A+ R NV N +A +++ ++ Sbjct: 69 GVGAIGISILAEHKKVEMDMVDINNRALRLCRSNVVRNGLKA----NVFLSDGFKNIQ-E 123 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY---FHKLKKIF 354 ++ ++ NPP Q + + ++ LK G LYIV + F KL+++F Sbjct: 124 TYDFIVSNPPIRQGKE----FLFRFYEESKSHLKDGGCLYIVIRKQQGAASSFKKLQEVF 179 Query: 355 GNCTTIATNNKFVVLKA 371 GNCT + + + +LK+ Sbjct: 180 GNCTVLEKKSGYWILKS 196 >UniRef50_C8NTY6 Methyltransferase small domain protein n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NTY6_9CORY Length = 324 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 70/351 (19%), Positives = 126/351 (35%), Gaps = 43/351 (12%) Query: 35 LLQQLDDTEIRGPVLILNDAFGAL-SCALAEHKPYSIGDS-YISELATRENLRLNGIDES 92 L+ ++ D G V++ +D G L + AL P DS Y A + + Sbjct: 4 LILEVADLSTPGAVVVCDDPTGDLVAAALELGVPVYCVDSDYTRAHAAHAAGAVVAGIDG 63 Query: 93 SVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTL 152 ++ + V + ++PK+L L+ R+L R++ G + + S Sbjct: 64 PLRADEFLVSCAPAGAVAVGEMPKSLGRLDYLARSLASAGV--GRVVFGGNNKHLARSMN 121 Query: 153 ELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTG 212 ++ + K R + + + VFS Sbjct: 122 DVLASSFAEVAASRGRGKFRCLVASGPRDVAYSPVEA---------GGFTAVGGVFSGAR 172 Query: 213 LDIGARFFMQHLPENLE--GEIVDLGCGNGVIGLTLLDKN--------PQAKVVFVDESP 262 D G L ++ G+++D+GCGNG + LL+ V+ S Sbjct: 173 EDYGGALLTSTLLDSRAELGKVLDVGCGNGSVVKRLLEAGVDATATDADADAVL----ST 228 Query: 263 MAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 322 A+ E ++A S E F+ V NPPFH + + + + Sbjct: 229 RAL----------------GIEATWDDAGSQWEAGTFDTVALNPPFHDRAGVDATLVQHL 272 Query: 323 FHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 + R L G+L++V N HL Y +++ + +A N KF VL+ + Sbjct: 273 LDASVRLLAPGGQLFMVHNSHLRYRGEVEARLKSVEQVARNQKFTVLRGTR 323 >UniRef50_Q045V2 16S RNA G1207 methylase RsmC n=22 Tax=Bacilli RepID=Q045V2_LACGA Length = 217 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 85/209 (40%), Gaps = 15/209 (7%) Query: 169 KKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPE-- 226 KK ++ P V + ++ D A VFS+ +D G+ ++ + E Sbjct: 17 KKNQMYFAA--NPDAKHDEHLVDYHIDDIDLKFTTDAGVFSKLRIDYGSGVLIKTMKELT 74 Query: 227 NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFM 286 E I+D+G G G +GL P +V VD + A+ ++ N + N +D Sbjct: 75 FPEAGILDVGTGYGPMGLFAAKFWPDQEVDMVDVNERAIDLAKRNAQFN---HIDNVNIY 131 Query: 287 INNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY 346 +N V ++ ++ NPP V ++ A+ L NG L +V + Sbjct: 132 ESNIYEQV-DNKYGLIITNPPIRAGKK----VVDQILSEAKEHLVENGILLVVIQKKQGA 186 Query: 347 F---HKLKKIFGNCTTIATNNKFVVLKAV 372 + K++GNC +A + + +L + Sbjct: 187 PSAKKLMTKVYGNCEILARDKGYYILMSK 215 >UniRef50_D2LVZ2 Methyltransferase small n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LVZ2_BACS4 Length = 200 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 11/199 (5%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLP-ENLEGEIVDLGC 237 +P + + ++ + +T + +FS+TGLD G+R ++ N+ G IVD+GC Sbjct: 8 EKPTVKSERKKITETITNDQYTFYVDRGIFSKTGLDFGSRLLIESFELPNVVGTIVDVGC 67 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G G I ++L +NP + +D + AV + NV+ N M +N L G E Sbjct: 68 GWGPISISLAKRNPNIDFIALDINERAVKLTEENVKLNGV---TNLHVMQSNLLEGHEGK 124 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF---HKLKKIF 354 ++A++ NPP ++++ A L NGE++IV + KL+ + Sbjct: 125 YYSAIITNPPIRAGKNT----VFKLYEQAANALVKNGEIWIVIQKKQGAPSTIAKLEDLG 180 Query: 355 GNCTTIATNNKFVVLKAVK 373 + I + + +++ K Sbjct: 181 FDVEVIKKSKGYYIIRGKK 199 >UniRef50_Q9V1A1 Ribosomal RNA small subunit methyltransferase C (RRNA (Guanine-n2-)-methyltransferase) (16S rRNA M2G1207 methyltransferase) n=4 Tax=Thermococcaceae RepID=Q9V1A1_PYRAB Length = 195 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 12/197 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCG 238 EP + + + + G + + VFS LD G ++++ + +I+DLGCG Sbjct: 7 REPNVPLKTKQIDVCIRGYCFKFITASGVFSFGKLDRGTELLIENMILKPDWKILDLGCG 66 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 GVIG+ + + VV D + AV +R N++ N + E + N VE + Sbjct: 67 YGVIGI-VASRFVN-YVVMTDINKRAVQIARKNIKINGVK---NAEVRLGNLYEPVEGEK 121 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY---FHKLKKIFG 355 F++++ NPP H ++ E+ +A L G L +V L +K F Sbjct: 122 FHSIITNPPVHAGK----DILREIVINAPNYLHDGGMLQLVIKTKLGAKFIKDLMKDTFT 177 Query: 356 NCTTIATNNKFVVLKAV 372 +A + + V + Sbjct: 178 EVVELAKGSGYRVYAGI 194 >UniRef50_A9KTA1 Methyltransferase small n=3 Tax=Firmicutes RepID=A9KTA1_CLOPH Length = 207 Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 81/189 (42%), Gaps = 6/189 (3%) Query: 190 VSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDK 249 + +E VFS + D G + ++ + ++DLGCG G++G+ Sbjct: 2 IHVTIEDISLDFITDPEVFSPSFADRGTLAMLSYVTFDNSDTLLDLGCGYGLVGIYASKV 61 Query: 250 NPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFH 309 A+V D S AV S+ N E N + LD + ++ + ++ +L NPP+H Sbjct: 62 LSPARVTMCDISEKAVELSKKNAEYN--QVLDELTILQSDGFRNLPVDEYSLILSNPPYH 119 Query: 310 QQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVL 369 + +V + R L + G+LY+V R Y +K+ +FG + ++ + Sbjct: 120 ----VDFSVPKHFIEESYRRLIMGGKLYMVTKRKDWYKNKIISVFGGVEIHEKDGYYIFI 175 Query: 370 KAVKLGRRR 378 + ++ Sbjct: 176 AQKRPKGKK 184 >UniRef50_A6UF35 Methyltransferase small n=17 Tax=Rhizobiales RepID=A6UF35_SINMW Length = 338 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 58/301 (19%), Positives = 104/301 (34%), Gaps = 5/301 (1%) Query: 74 YISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVT 133 + +E++ + LR ++ + L+ K E ++ K Sbjct: 42 FAAEVSAVQPLRPLYRALTAARVDVVPVADGDGYDAALVLSGKHKGENEDRIAEALKRTR 101 Query: 134 SDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWK 193 + I+ D S + +K G + + T E Sbjct: 102 AGALIVVAGGKEDGIQSLRKRIDK-FGWDGDAMPKYHGVVFWFTRPESAAEAISALAKVP 160 Query: 194 LEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQA 253 + D +FS +D G+ LP + G D G G G + + L + +P Sbjct: 161 VR-VDGLFEAAPGMFSHDRVDAGSELLASRLPRDFTGHAADFGAGWGYLSVRLAEASPTL 219 Query: 254 K-VVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQH 312 K + + A+ ++R F ++ + +++ ++ NPPFH+ H Sbjct: 220 KGIDLFEADFEALEAARA--NMAANAPSTPARFYWHDLSTEDTRDKYDLIVMNPPFHEGH 277 Query: 313 ALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAV 372 A + M A + LK G L +VANR L Y L + F N +F VL A Sbjct: 278 AAEPALGAAMIKAAAKALKHGGRLMLVANRGLPYEPVLAENFKEMGETCRNARFKVLWAK 337 Query: 373 K 373 + Sbjct: 338 R 338 >UniRef50_C5NY36 Methyltransferase small n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NY36_9BACL Length = 198 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 11/199 (5%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLE-GEIVDLGC 237 N P + ++ + + + VFS+ +D G + ++ N E ++VD+GC Sbjct: 7 NNPTTESREKIINSTIANENLKFYTDNGVFSKESVDFGTKTMLESFTTNKENAKVVDIGC 66 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G GVI + L K P K VD + + S+ N+E N E E + +++ V Sbjct: 67 GYGVISIFLAKKYPTYKFTMVDVNNRVLELSKKNIELNKIENE--VEVLESSSFDNVV-G 123 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY---FHKLKKIF 354 F+ VL NPP + ++ + L GEL++V + L+ F Sbjct: 124 TFDIVLTNPPIRAGKK----IVHKIMTDSYEHLNAQGELWVVIQKKQGMASCKKLLEDTF 179 Query: 355 GNCTTIATNNKFVVLKAVK 373 + N + +LKAVK Sbjct: 180 SMVEVVTKNKGYYILKAVK 198 >UniRef50_A8A8U2 Methyltransferase small n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A8U2_IGNH4 Length = 194 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 44/190 (23%), Positives = 79/190 (41%), Gaps = 13/190 (6%) Query: 186 APQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLT 245 P+ V + G +FS + +D+G + + EG+++D+GCG GV+G+ Sbjct: 12 RPEVVGAWIRGAPLKFIVPRGLFSSSKVDLGTALLAEFMEIPKEGKVLDVGCGYGVLGIL 71 Query: 246 LLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG---VEPFRFNAV 302 + NP +V VD +P+AV +++ N E N R + N + F+ + Sbjct: 72 MAKLNPNLEVYMVDVNPVAVDAAKRNAELNGV----RVTVLQGNLYEPTDLLGIKDFSTI 127 Query: 303 LCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV-ANRHLDYFHKLKKIFGNCTTIA 361 + NPP V E+ A LK G L +V A +++ F + Sbjct: 128 VSNPPLAAGKE----VVKEIIEGAPARLKSGGSLQLVMAQGGDWAKGVMEEYFKEVE-VK 182 Query: 362 TNNKFVVLKA 371 + +L+ Sbjct: 183 RKKGYALLRG 192 >UniRef50_Q057M1 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=RSMC_BUCCC Length = 343 Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 107/270 (39%), Gaps = 11/270 (4%) Query: 105 QQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTT 164 ++ + K + L L ++ I + + S ++F L Sbjct: 82 SSYKQLIFFLTKNKKEFKLHLTFLLSHISKTCVIYVVGEKKCGINSISKIFSNYLIF-KK 140 Query: 165 TLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL 224 + L + + ++ + + TI + VF +D G++ + Sbjct: 141 IDYARTCSLYKAKIMKLPKFYLHKFINIYIWN-NITIQSLPGVFGYKKIDTGSKLLISTF 199 Query: 225 PENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCE 284 + + G+I+D+G G G++ + L KNP K+ D A+ S+ N+ N + Sbjct: 200 NKKINGKILDIGSGTGILSIALAKKNPLIKITLTDIYDAAIWCSKNNLIKNNLIG----K 255 Query: 285 FMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH- 343 + ++ S ++ R++ ++ NPP H + + ++ ++++ LK GEL IV + Sbjct: 256 VLFSDIYSHIK-KRYDLIISNPPIHYNLKINLKILKKIIKNSKKHLKKKGELRIVISSFI 314 Query: 344 -LDYFHKLKKIFGNCTTIATNNKFVVLKAV 372 L Y KI N + N + V++ Sbjct: 315 SLKYIINFNKI--NFKILLKNKSYTVIQIT 342 >UniRef50_B1MVU0 16S RNA G1207 methylase RsmC n=11 Tax=Lactobacillales RepID=B1MVU0_LEUCK Length = 213 Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 13/198 (6%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL--EGEIVDLGC 237 P Q ++L + VFS++ +D G R ++ L + +G+I+DLG Sbjct: 17 NPNSEHHYQNFEFELLNHKLHFTTDSGVFSKSTVDFGTRTMLEALETVIINDGKILDLGT 76 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G G +G+ + + +V VD + A+ ++ N + N L R +N + Sbjct: 77 GYGPVGIAIAKAMSR-QVDMVDVNERALELAQQNAQKNGVTQLTRI--FQSNIYDKITD- 132 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK---LKKIF 354 ++ +L NPP A V M A + L+ G+L V + + IF Sbjct: 133 KYALILTNPPIRAGKA----VVTVMLQDAIKHLQPGGKLIAVLQKKQGAPSAQKNMMTIF 188 Query: 355 GNCTTIATNNKFVVLKAV 372 GN IA N + +L++ Sbjct: 189 GNARIIAKNKGYYILEST 206 Score = 49.1 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 55/142 (38%), Gaps = 6/142 (4%) Query: 45 RGPVLILNDAFGALSCALAEHKPYSIGDSYISELAT---RENLRLNGIDE-SSVKFLDST 100 G +L L +G + A+A+ + ++E A ++N + NG+ + + + + Sbjct: 68 DGKILDLGTGYGPVGIAIAKAMSRQVDMVDVNERALELAQQNAQKNGVTQLTRIFQSNIY 127 Query: 101 ADYPQQPGVVLIKVP--KTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKV 158 + ++L P A++ L+ K + ++IA + + S + + Sbjct: 128 DKITDKYALILTNPPIRAGKAVVTVMLQDAIKHLQPGGKLIAVLQKKQGAPSAQKNMMTI 187 Query: 159 LGPTTTTLAWKKARLINCTFNE 180 G K ++ T++ Sbjct: 188 FGNARIIAKNKGYYILESTYDS 209 >UniRef50_C3RJV2 16S rRNA m(2)G 1207 methyltransferase n=4 Tax=Bacteria RepID=C3RJV2_9MOLU Length = 197 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 86/198 (43%), Gaps = 13/198 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEG-EIVDLGC 237 N L P+ + G + + VFS+ +D G+R + + + ++D+GC Sbjct: 7 NNEDLISEPEQFIFTYRGKELIFTSDHGVFSKKMIDFGSRVLLDAIELDEGKSTLLDVGC 66 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G G G+ L P ++ +D + A+ ++ N+ N EA +++ V Sbjct: 67 GYGTFGVALKSAYPALEIDMIDVNERALLLAKQNLAANNLEA----NVYLSSVYENVT-N 121 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK---LKKIF 354 +++ ++ NPP ++ A+ L ++GE+++V + L+ +F Sbjct: 122 KYDVIVTNPPIRAGKET----VTKILVEAKEHLNLHGEIWVVIQKKQGAPSAKKNLESVF 177 Query: 355 GNCTTIATNNKFVVLKAV 372 GN + + + +LKA+ Sbjct: 178 GNANVVKKDKGYYILKAI 195 Score = 49.1 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 50/147 (34%), Gaps = 7/147 (4%) Query: 29 EAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGD----SYISELATRENL 84 + LL ++ E + +L + +G AL P D + + L ++NL Sbjct: 42 DFGSRVLLDAIELDEGKSTLLDVGCGYGTFGVALKSAYPALEIDMIDVNERALLLAKQNL 101 Query: 85 RLNGIDESSVKFLDSTADYPQQPGVVLIKVP--KTLALLEQQLRALRKVVTSDTRIIAGA 142 N + E++V + + V++ P + + L ++ + I Sbjct: 102 AANNL-EANVYLSSVYENVTNKYDVIVTNPPIRAGKETVTKILVEAKEHLNLHGEIWVVI 160 Query: 143 KARDIHTSTLELFEKVLGPTTTTLAWK 169 + + S + E V G K Sbjct: 161 QKKQGAPSAKKNLESVFGNANVVKKDK 187 >UniRef50_B0UBH2 Methyltransferase small n=17 Tax=Alphaproteobacteria RepID=B0UBH2_METS4 Length = 312 Score = 173 bits (440), Expect = 8e-42, Method: Composition-based stats. Identities = 63/289 (21%), Positives = 98/289 (33%), Gaps = 9/289 (3%) Query: 87 NGIDESSVKFLDSTADYPQQ-PGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKAR 145 V + D+ V+I P A L +V+ R+ A A Sbjct: 31 ARQVSPLVPGAAALEDFAADTLDEVVILAPPGTAERRAVLAQGLRVLRPSGRLTALAPKD 90 Query: 146 DIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLE-GTDWTIHNH 204 + G A + R+ + D + Sbjct: 91 RGGSRLGREMA-GFGCAVAETAKRHHRICRAERPAAPVGIEAALAEGAPRYLPDLGLWTQ 149 Query: 205 ANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMA 264 +FS +D G + LP L+G DLGCG GVI +L + D A Sbjct: 150 PGIFSWNRIDPGTALLLDTLP-PLKGRGADLGCGLGVIARAVLASPAVTALTLADIDRRA 208 Query: 265 VASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFH 324 VA++R NVE + P R + V+ NPPFH + + + Sbjct: 209 VAAARRNVEDPRAHVAWADARRADAL-----PGRLDFVVTNPPFHLKGSEDQGLGQAFIR 263 Query: 325 HARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 A L+ G L++ AN HL Y L + F T A+ + + V +A++ Sbjct: 264 RAAEVLRPGGALWLTANLHLPYEAVLAEAFRTVTARASGHGYKVYEAIR 312 >UniRef50_C4FY86 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FY86_9FIRM Length = 203 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 81/201 (40%), Gaps = 13/201 (6%) Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPEN---LEGEIVD 234 + P A + + G + VFS+ +D G++ ++ + +IV+ Sbjct: 7 KSSPTSQHALHQIQDGVAGLTLSFQTDNGVFSKQRMDYGSKVLVEAFADAVPVGSYQIVE 66 Query: 235 LGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV 294 LG G G + + L PQA+V V+ + A ++ N + N E + + +A Sbjct: 67 LGSGYGPVTIALAKLYPQAQVTGVEINERAYQLAQANSQLNRVE---NTAYQLADAGQWQ 123 Query: 295 EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK---LK 351 + V+ NPP V + A+ L+ GEL++V + ++ Sbjct: 124 ASQAPDFVVTNPPIRAGK----QVIQQFVRSAQANLRPGGELWLVIQKKQGAPSMETFME 179 Query: 352 KIFGNCTTIATNNKFVVLKAV 372 ++FGN + + +LK+ Sbjct: 180 EVFGNVELVTRYKGYWILKSK 200 Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 61/163 (37%), Gaps = 9/163 (5%) Query: 16 FPATDDVNPLQAWEAADEYLLQQLDDTEIRG--PVLILNDAFGALSCALAEHKPYSIGDS 73 F + V Q + + L++ D G ++ L +G ++ ALA+ P + Sbjct: 30 FQTDNGVFSKQRMDYGSKVLVEAFADAVPVGSYQIVELGSGYGPVTIALAKLYPQAQVTG 89 Query: 74 YI----SELATRENLRLNGIDESSVKFLDSTA-DYPQQPGVVLIKVP--KTLALLEQQLR 126 + + N +LN ++ ++ + D+ Q P V+ P +++Q +R Sbjct: 90 VEINERAYQLAQANSQLNRVENTAYQLADAGQWQASQAPDFVVTNPPIRAGKQVIQQFVR 149 Query: 127 ALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWK 169 + + + + + + S E+V G +K Sbjct: 150 SAQANLRPGGELWLVIQKKQGAPSMETFMEEVFGNVELVTRYK 192 >UniRef50_A8F736 Methyltransferase small n=1 Tax=Thermotoga lettingae TMO RepID=A8F736_THELT Length = 210 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 12/185 (6%) Query: 196 GTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKV 255 G + + VFS +D + ++H + +++DLGCG GV+G+ + + P ++V Sbjct: 35 GRIYKFKTPSGVFSFGKVDKATKILVEHAIVH-GKKVLDLGCGYGVVGIVVKGEYPDSEV 93 Query: 256 VFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALT 315 D + AV +R+N + N + + + +F+ +L NPP A Sbjct: 94 YMSDVNERAVEFARINAKDNNVD----VTIKCGSFYDPWQEEKFDVILLNPPMAAGKAT- 148 Query: 316 DNVAWEMFHHARRCLKINGELYIVA--NRHLDYFHK-LKKIFGNCTTIATNNKFVVLKAV 372 M + + + L G L +VA N+ Y K +++ FGN I + K+V Sbjct: 149 ---VLRMIYESIKHLNEKGSLQVVAYHNKGGSYIKKAMQETFGNVEDICKEGGIRIYKSV 205 Query: 373 KLGRR 377 +L Sbjct: 206 RLKGA 210 >UniRef50_D2RAI3 Methyltransferase small domain protein n=27 Tax=Actinobacteridae RepID=D2RAI3_GARVA Length = 232 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 48/228 (21%), Positives = 99/228 (43%), Gaps = 19/228 (8%) Query: 161 PTTTTLAWKKARLINCTFN---EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGA 217 T + +K + I+ P D +T+ L + + VFS + LD+G Sbjct: 11 DKTKSPKSEKTQKISGEQYFSATPSSCDERRTLHVTLRNHETVVQVSNGVFSASKLDLGT 70 Query: 218 RFFMQHLPENLE-GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM 276 ++H P+ E G+ +D+GCG G I + + ++P+A++V VD + A+ + LN + Sbjct: 71 SVLLKHAPKPPENGKFLDIGCGWGPISIAMGLESPEAEIVAVDVNERALELTELNAKNAG 130 Query: 277 PEALDRCEFMINNALSG---VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKIN 333 + + ++++AL +E F+ + NPP + ++ LK+ Sbjct: 131 LKHIR--TSLVDDALKENNTLEFNNFDLIWSNPPIRVGKEMLHDILMTWIP----RLKVG 184 Query: 334 GELYIVANRHLDYF---HKLKKIFGN---CTTIATNNKFVVLKAVKLG 375 G Y+V ++L L + G A++ + +++ +K Sbjct: 185 GAAYLVVQKNLGSDSLIPWLAENLGENYIVEKYASSKGYRIIEVIKTK 232 >UniRef50_A3K8H8 Methyltransferase, putative n=5 Tax=Rhodobacteraceae RepID=A3K8H8_9RHOB Length = 335 Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats. Identities = 70/351 (19%), Positives = 133/351 (37%), Gaps = 29/351 (8%) Query: 37 QQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKF 96 ++L G +++ +D AL A A+ + S ++ + T + + Sbjct: 4 ERLRFAIETGGLVLPDDGPLALIGAPADAPVDMLDTSRLTVIQTDAAAHDGWVA----RG 59 Query: 97 LDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELF- 155 L + + ++ +P+ E +L + ++ D + L+ Sbjct: 60 LPTATAPEGRFAAAIVTLPRARDAAEARLALAARHAN---MVVIDGAKTDGVEAILKALR 116 Query: 156 EKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDI 215 ++V + A + + LAD + + DW +FS D Sbjct: 117 QRVTLDGQVSKAHGRCAWVR---PGDALADWLRPTQAQNAHGDW---VAPGIFSADAPDE 170 Query: 216 GARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN 275 + + L+G++ DLG G G + +L + + V+ A+ +RLNV Sbjct: 171 ASVA-LAAALSALKGDVADLGAGWGWLSRGILRHHGVKTLHLVETEKTALDCARLNVTD- 228 Query: 276 MPEALDRCEFMINNALSGVEPF--------RFNAVLCNPPFHQQHALTDNVAWEMFHHAR 327 R F +A + P + +AV+ NPPFH + A Sbjct: 229 -----PRAVFHWADATAWTPPQPAGAHAPRKLDAVVMNPPFHTGRRADPALGRAFIEAAA 283 Query: 328 RCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR 378 R L +G+L++VANRHL Y L +F + I +++F +L A ++ R R Sbjct: 284 RVLAPHGQLWMVANRHLPYETALIALFRDVAEIGGDSRFKLLHAARVIRAR 334 >UniRef50_B8I811 Methyltransferase small n=2 Tax=Clostridium RepID=B8I811_CLOCE Length = 198 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 86/199 (43%), Gaps = 13/199 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRT-GLDIGARFFMQHLPENLEGEIVDLGC 237 P+ + + + G+ T + + VFS +D + +++ ++D+GC Sbjct: 8 ENPESEIKEKRFTESICGSSLTFTSVSGVFSFETKIDRASENLIKNF-TPSGMSVLDIGC 66 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G G IGL + PQ + +D + A+ ++ N +N E + +N + +E Sbjct: 67 GYGAIGLYIKSIFPQQNITMIDVNNRALDYTKKNAASNNLS----VEALNSNLFTALEGR 122 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA--NRHLDYFHK-LKKIF 354 F+ ++ NPP L + + L NG L++VA N+ K ++ IF Sbjct: 123 TFDDIISNPPIAAGKELNT----RLITESYEHLSKNGALWLVAFHNKGGSTLKKVMETIF 178 Query: 355 GNCTTIATNNKFVVLKAVK 373 GN T + + V K+++ Sbjct: 179 GNVTDVDKSGGVRVYKSIR 197 Score = 44.1 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 51/156 (32%), Gaps = 8/156 (5%) Query: 29 EAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYI----SELATRENL 84 + A E L++ + + VL + +GA+ + P + T++N Sbjct: 44 DRASENLIKNFTPSGMS--VLDIGCGYGAIGLYIKSIFPQQNITMIDVNNRALDYTKKNA 101 Query: 85 RLNGIDESSVKFLDSTADYPQQPGVVLIKVP--KTLALLEQQLRALRKVVTSDTRIIAGA 142 N + ++ TA + ++ P L + + + ++ + + A Sbjct: 102 ASNNLSVEALNSNLFTALEGRTFDDIISNPPIAAGKELNTRLITESYEHLSKNGALWLVA 161 Query: 143 KARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTF 178 ++ ++ E + G T R+ Sbjct: 162 FHNKGGSTLKKVMETIFGNVTDVDKSGGVRVYKSIR 197 >UniRef50_UPI0000382BBF COG2813: 16S RNA G1207 methylase RsmC n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000382BBF Length = 213 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 53/219 (24%), Positives = 80/219 (36%), Gaps = 9/219 (4%) Query: 157 KVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTD-WTIHNHANVFSRTGLDI 215 + G T + R+ E D + +FS LD Sbjct: 2 RSFGCAVTDEPRRHHRICTALRPETPSGLDAAVAEGAPRHIDNLALCTQPGIFSWDRLDP 61 Query: 216 GARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN 275 G ++HLP L G D GCG G++ +L A + +D AVA +R NV+ Sbjct: 62 GTALLLRHLPA-LSGRGADFGCGLGILARAVLTSPKVASLALIDIDRRAVAMARRNVDEA 120 Query: 276 MPEALDRCEFMINNALSGVEPFR-FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKING 334 R + + V+ NPPFH A + A L+ G Sbjct: 121 ------RASHHWADLRGAEPALSGLDFVVTNPPFHDGGAEDQALGRAFIARAASALRPGG 174 Query: 335 ELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 L++VAN HL Y L+ F + T + T + + +A K Sbjct: 175 TLHLVANAHLPYEAPLRDAFRSVTPVVTEGGYKLFEARK 213 >UniRef50_B8D5U1 Ribosomal RNA small subunit methyltransferase C (RRNA (Guanine-n2-)-methyltransferase) n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D5U1_DESK1 Length = 200 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 6/193 (3%) Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGC 237 + +P + S+ + G + ++ ++FS + LD G R ++++ G ++D+GC Sbjct: 11 YYKPGQPGERKLFSFTIHGYTFEFISYTSLFSGSSLDDGTRLLLENIMVPRSGVVLDIGC 70 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G GVIG+ + NP +V D +P+AV +RLN N E DR + + VE Sbjct: 71 GYGVIGIVVAKLNPLLEVYMTDVNPLAVKVARLNASRNNVE--DRVVVLQGDRYKPVEGM 128 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNC 357 +FNA+ NPP + + ++ ARR L +G V R +Y + + + Sbjct: 129 KFNAIYSNPP----LSAGMRIVEDIVLGARRYLTEDGFAQFVLARGGEYLAEKARESYSI 184 Query: 358 TTIATNNKFVVLK 370 + +++L Sbjct: 185 VDAKSKKGYILLY 197 >UniRef50_A6CDL7 Probable ribosomal RNA small subunit methyltransferase C n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CDL7_9PLAN Length = 364 Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 66/360 (18%), Positives = 125/360 (34%), Gaps = 32/360 (8%) Query: 32 DEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYS-IGDSYISELATRENLR----- 85 ++ LL L L L+ AL + + D + + + ++ Sbjct: 19 EQLLLDFLPADWSSAQTLCFQSNLYPLTTALMKRVSETDRVDCFSFDKTIAQRIQHKCSL 78 Query: 86 -LNGIDESSVKFLDSTADYPQQ-PGVVLIKVPKTLALLEQQLRALR-----KVVTSDTRI 138 +++ V +++PQ VL+ P + ++ +R L + T T Sbjct: 79 LQEEQEQTPVWNTFCDSEFPQGDYESVLL--PLSEQFSDELVRELTLSAAYSLQTGGTLT 136 Query: 139 IAGAKARDI--HTSTLELFEKVLGPTTTTLAWKKARLINCTFNEP-QLADAPQTVSWKLE 195 IA ++ +D H LF KV T +A + +P Q S E Sbjct: 137 IASSRTKDYEYHKFLQTLFSKV-----TRIASDVGIVYQGKRQQPLPEKKCLQDESAMRE 191 Query: 196 GTDWTI-HNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAK 254 G + VFS + AR + + + E I++L CG+G++ + P ++ Sbjct: 192 GEKLLFAYTQPGVFSHRRPNQSARALINLMELSDESTILNLECGSGIVSFVAATRCPGSQ 251 Query: 255 VVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHAL 314 + +D + AV + + N + G+ P ++ +L N + Sbjct: 252 IHALDSNARAVKCTEQGIGKNQL---ANVSVKLAATDEGIMPESYDYLLTNKSYFNSEEQ 308 Query: 315 TDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKL 374 R LK G L ++ Y H+L +F + + F+ L A K Sbjct: 309 G----EAFLQMCLRALKPGGLLQFSTKQYQWYAHRLLDLFTDVAIDGAVHHFM-LSARKP 363 >UniRef50_D0U5Y8 16S RNA G1207 methylase RsmC n=1 Tax=uncultured actinobacterium RepID=D0U5Y8_9ACTN Length = 225 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 80/200 (40%), Gaps = 15/200 (7%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPEN-LEGEIVDLGC 237 +P A + + + G + + VF++ G+D G + + P G +DLGC Sbjct: 33 TQPNSASDERFTRFVVGGRNLQLVTDRGVFAKKGVDQGTQILLDAAPRPSTTGNFLDLGC 92 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G+G I + L +P+AKV +D + A+ N + N + ++S Sbjct: 93 GSGAIAMALASYSPEAKVWAIDVNARALQLVGENAQRNGLG---NITALFPQSVSP--DI 147 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK----LKKI 353 +F+ + NPP ++ L +G+ ++V NR+L + K Sbjct: 148 QFDLIWSNPPIRIGK----QALHDLLDTWLTRLSPSGQAWLVVNRNLGSDSLAVWMMSKG 203 Query: 354 FGNCTTIATNNKFVVLKAVK 373 F + + F VLK + Sbjct: 204 F-EVARLTSKRGFRVLKVTR 222 Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 51/183 (27%), Gaps = 10/183 (5%) Query: 2 SHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCA 61 + G R+L L V + + + LL G L L GA++ A Sbjct: 44 TRFVVGGRNLQLV---TDRGVFAKKGVDQGTQILLDAAPRPSTTGNFLDLGCGSGAIAMA 100 Query: 62 LAEHKPYSIGDS----YISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVP-- 115 LA + P + + + EN + NG+ + + Q ++ P Sbjct: 101 LASYSPEAKVWAIDVNARALQLVGENAQRNGLG-NITALFPQSVSPDIQFDLIWSNPPIR 159 Query: 116 KTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLIN 175 L L ++ + S + + R++ Sbjct: 160 IGKQALHDLLDTWLTRLSPSGQAWLVVNRNLGSDSLAVWMMSKGFEVARLTSKRGFRVLK 219 Query: 176 CTF 178 T Sbjct: 220 VTR 222 >UniRef50_A3DND7 Methyltransferase small n=1 Tax=Staphylothermus marinus F1 RepID=A3DND7_STAMF Length = 193 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 8/194 (4%) Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGC 237 + + + G ++ ++FS +D G ++++ EGE++D+GC Sbjct: 4 YYRKGYPGRKTLIPLTIRGVTLEFVSYTSLFSGREVDKGTYLLLKYIDVPDEGEVLDVGC 63 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G GVIGLT+ NP+ KV VD +P+AV ++ N + N E + + + V+ Sbjct: 64 GYGVIGLTIAKLNPRLKVYMVDINPLAVKITKYNAKLNNLE--KQVVVLQGDVYEPVKNL 121 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF-HKLKKIFGN 356 RFNA+ NPP ++ A LK +G V R +Y K ++I+ + Sbjct: 122 RFNAIYSNPPLSSGMYT----VEKIVLEAINYLKPDGFAEFVLARGGEYLVEKARRIYRH 177 Query: 357 CTTIATNNKFVVLK 370 +I +++LK Sbjct: 178 VESI-RKKGYIILK 190 >UniRef50_C7NCQ1 Methyltransferase small n=5 Tax=Fusobacteriaceae RepID=C7NCQ1_LEPBD Length = 209 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 90/207 (43%), Gaps = 16/207 (7%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL------PENLEGEI 232 + ++ + + + +E ++ VFS+T +D G ++ +N + ++ Sbjct: 7 EKQEVKSDKKIIKYTIENKNFEFITDNGVFSKTKVDFGTDVMLKVFLRENQNKKNQKFDV 66 Query: 233 VDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEF--MINNA 290 +D+GCG GV+ + + K++ D + A+ ++ N+ N + EF + A Sbjct: 67 LDIGCGYGVVSVIIKSFFENTKIISSDVNERALELTKENLLKNNAIKNENEEFEIRKSFA 126 Query: 291 LSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY---F 347 + +F+ +L NPP ++++ + L NGE Y V Sbjct: 127 FDNIS-EKFDVILSNPPIRAGKQT----IFQIYEKSSEHLNSNGEFYCVIQTKHGAKSTQ 181 Query: 348 HKLKKIFGNCTTIATNNKFVVLKAVKL 374 KL++IF NC T+ N + + + +K+ Sbjct: 182 KKLEEIFRNCETLEINAGYRIFRCIKI 208 >UniRef50_Q7UM12 Probable ribosomal RNA small subunit methyltransferase C n=1 Tax=Rhodopirellula baltica RepID=Q7UM12_RHOBA Length = 346 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 59/325 (18%), Positives = 116/325 (35%), Gaps = 17/325 (5%) Query: 30 AADEYLLQQLDDTEIR--GPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLN 87 +++ L+ L + ++++ G + ALA P S S+ +L E R Sbjct: 8 PSEQLLIDHLASSTRSSLASAIVMSPGRGQAANALAAAFPNSKTTSWFVDLHRAERARE- 66 Query: 88 GIDESSVKFLDSTADYPQQPGVVLIKVPKT--LALLEQQLRALRKVVTSDTRIIAGAKAR 145 + V + + L+ V KT + + + +T +IA + Sbjct: 67 -VTSEDVHVICQPDLPDTTWELALLPVLKTGEAEMNRDLIHQSWQRLTIGGELIAAVNSP 125 Query: 146 DIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQ--TVSWKLEGTDWTIHN 203 +L + LGP R+ + + + +++ T+H+ Sbjct: 126 KDTWLLNQL--QALGPKVRCHDHATGRVYSVRKSSVTFKPKNFDAEFTHRVDDRILTVHS 183 Query: 204 HANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPM 263 +VFS +D A +++ P +++LGCGNG + + ++ VD + Sbjct: 184 RPSVFSHRSVDRAAAAMIRNAPIPEGSTVLELGCGNGAVAMAAAMRSKTGHAYAVDCNSR 243 Query: 264 AVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMF 323 AV + N + L L V P + L NPP++ +A Sbjct: 244 AVQCTERAAAQNQIKNLTAIVNHNGE-LPNVPP--CDIALLNPPYYG----DFRIAEHFM 296 Query: 324 HHARRCLKINGELYIVANRHLDYFH 348 A + L+ GE Y++ + Y Sbjct: 297 VTAAKKLRSGGEAYVITKQTDRYLE 321 >UniRef50_C2KPF6 Possible 16S rRNA methyltransferase n=4 Tax=Actinomycetales RepID=C2KPF6_9ACTO Length = 282 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 51/195 (26%), Positives = 84/195 (43%), Gaps = 10/195 (5%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEI-VDLGCG 238 P A P+ + +L G + IH + VFS GLD G ++ +P+ EG + VD+GCG Sbjct: 88 NPSAAARPRELEVELAGMTFRIHTDSGVFSGDGLDKGTAVLLRKVPKLPEGGVFVDVGCG 147 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 G + L + + P A+VV VD + A+ + N N L+ AL+ + Sbjct: 148 WGPLSLVMARQRPAARVVAVDVNARALDLTAKNARENGLGNLE--VLAETAALAQLADGS 205 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF---HKLKKIFG 355 + + NPP + M+ R L+ G Y+V R+L + Sbjct: 206 VDVIWSNPPVRIGK----DALHAMWTAWRVKLRPGGVAYLVMGRNLGADTFAAWARDSGW 261 Query: 356 NCTTIATNNKFVVLK 370 +A++ F VL+ Sbjct: 262 ETERLASSKGFRVLQ 276 >UniRef50_A4RYF4 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RYF4_OSTLU Length = 865 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 64/373 (17%), Positives = 127/373 (34%), Gaps = 46/373 (12%) Query: 30 AADEYLLQQLDDT--EIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLN 87 +AD L Q++ E+ VLI++D ++ L +S+ N + Sbjct: 513 SADALLAQEITAPFDELSARVLIVDDKHRLITKRL-RRVGWSVS-----------NWQRF 560 Query: 88 GIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDI 147 + + +++ P T A L L A+ V RI + Sbjct: 561 SCGDHG-TGTSWPETPDEFYAAAMVRAPPTKASLAMILHAVAANVRFGGRIWIYGGITEG 619 Query: 148 HTSTLELFEK-VLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTI----- 201 + K + T + K +++C + Q + + E + Sbjct: 620 IRGVIADLPKGLFERTRLVMHDDKYGVVHCVRSSAQPDKKGKELKKWREKKTLDLSDVMT 679 Query: 202 -------HNHANVFSRTGLDIGARFFMQ----HLPENLEGEIVDLGCGNGVIGLTLLDKN 250 + +F+ GLD+ ++ + + +++D G G I + K Sbjct: 680 TEHSVPWVAYPGLFAGGGLDVMTTLLLRSVLPTIERKSKLKVLDYCSGAGQIAAAVRAKA 739 Query: 251 PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE--PFRFNAVLCNPPF 308 ++++ +D A+ +++ N+ D EF++++ +E F+ +L NPP Sbjct: 740 KKSRLWLLDADACALEAAKRNL-------SDDVEFILSDGWRALEKSDRAFDLILSNPPV 792 Query: 309 HQQHALTDNVAWEMFHHARRCL-KINGELYIVANRHLDYFHKL----KKIFGNCTTIATN 363 H A+ E R L + +G Y VA R++ + Sbjct: 793 HLGLAVDFVPIREFLAGLARRLRRPDGIAYFVAQRYVPVRAIAAGTTADTLKITRQGTDD 852 Query: 364 NKFVVLKAVKLGR 376 KF V K V G Sbjct: 853 AKFAVWKCVARGA 865 >UniRef50_A4YCT3 Methyltransferase small n=13 Tax=Sulfolobaceae RepID=A4YCT3_METS5 Length = 186 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 8/184 (4%) Query: 190 VSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDK 249 V+ + G + ++ +FS+ LD+G R +++L EG + D+GCG G IG+ + Sbjct: 8 VTDVVNGVPLNLISYPGLFSKKRLDLGTRVLLENLIIPEEGAVADVGCGYGPIGIYVAII 67 Query: 250 NPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFH 309 NP+ V +D +P+AV +SR NVE DR + + ++ LSG E FR A+ NPP Sbjct: 68 NPRLSVYMLDVNPLAVKASRENVERYGL--GDRVKVLKSDLLSGFE-FRVKAIYSNPP-- 122 Query: 310 QQHALTDNVAWEMFHHARRCLKINGELYIVANRHLD-YFHKLKKIFGNCTTIATNNKFVV 368 + +V + A L+ G + +V + + F + + + + Sbjct: 123 --LSKGVDVLERLARDAPERLEKGGWVQMVLYKGEGNAVKIFSEYFPEVKVMKSVKGYSI 180 Query: 369 LKAV 372 + AV Sbjct: 181 VLAV 184 >UniRef50_D2PU49 Methyltransferase small n=2 Tax=Actinomycetales RepID=D2PU49_9ACTO Length = 206 Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats. Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 14/198 (7%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEI-VDLGCG 238 +P AD +TV ++ D+ + VFSR LDIG ++ + ++ +DLG G Sbjct: 9 DPASADVRRTVQARIWDRDYEFTTASGVFSRDRLDIGTAVLLREVRPTPGRKVVLDLGAG 68 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCE-FMINNALSGVEPF 297 G I L +NP A V VD + A+ + +N DR + ++ V Sbjct: 69 YGPIACGLAVENPDAVVWAVDVNNRALELTAINAAAAGV--GDRVHPALPDDVPDDV--- 123 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLD---YFHKLKKIF 354 RF+ + NP H +M LK G ++V ++L L + Sbjct: 124 RFDEIWSNPAIHIGKPE----LHKMLLRWLSRLKPGGTAWLVVGKNLGGDSLQRWLTEQG 179 Query: 355 GNCTTIATNNKFVVLKAV 372 C +A+ F +L+A Sbjct: 180 YPCDRVASAKGFRILRAT 197 Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 48/162 (29%), Gaps = 10/162 (6%) Query: 29 EAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYI----SELATRENL 84 + LL+++ T R VL L +G ++C LA P ++ + + T N Sbjct: 43 DIGTAVLLREVRPTPGRKVVLDLGAGYGPIACGLAVENPDAVVWAVDVNNRALELTAINA 102 Query: 85 RLNGIDESSVKFLDSTADYPQQPGVVL----IKVPKTLALLEQQLRALRKVVTSDTRIIA 140 G+ + L + + I + K L + L + Sbjct: 103 AAAGVGDRVHPALPDDVPDDVRFDEIWSNPAIHIGK--PELHKMLLRWLSRLKPGGTAWL 160 Query: 141 GAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQ 182 S + P + K R++ T P Sbjct: 161 VVGKNLGGDSLQRWLTEQGYPCDRVASAKGFRILRATATNPG 202 >UniRef50_C1YW37 16S RNA G1207 methylase RsmC n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YW37_NOCDA Length = 223 Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats. Identities = 52/219 (23%), Positives = 80/219 (36%), Gaps = 27/219 (12%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL-EGEIVDLGC 237 ++P A P T L + VFS +D+G R ++ +P G ++DLGC Sbjct: 8 SDPGAASRPSTADLVLPDLHLRLRTDRGVFSPDKVDLGTRVLLESVPPPPEGGRLLDLGC 67 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFM----------- 286 G G I LT+ + P A+V+ VD + AV +R N + + Sbjct: 68 GYGPIALTMASRAPGARVLGVDVNARAVGLARRNAAEHGLDNARFAVVEPEGGLSVERGA 127 Query: 287 -------INNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 339 ++ + F+AV NPP V M L G ++V Sbjct: 128 SGEGAPARDDVTAQDLLGPFDAVWSNPPIRVGK----GVLHSMLRTWLGRLTPEGVAHLV 183 Query: 340 ANRHLD---YFHKLKKIFGNCTTIATNNKFVVLKAVKLG 375 RHL L + +A+ F VL AV+ Sbjct: 184 VQRHLGSDSLQKWLDEQGLPAERVASRAGFRVL-AVRRS 221 >UniRef50_C8WTY2 Methyltransferase small n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTY2_ALIAD Length = 199 Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats. Identities = 47/197 (23%), Positives = 82/197 (41%), Gaps = 11/197 (5%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGN 239 +P + V + G + VFS+ GLD G R ++ + +DLGCG Sbjct: 8 DPSAPSEERVVRVQARGVTVALWTDRGVFSKAGLDEGTRRLIESVDLTGAASALDLGCGY 67 Query: 240 GVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRF 299 G + L P + +D + AV +R N +P+ + + ++ + F+F Sbjct: 68 GPVTAILARVYPGVQWWMIDVNRRAVELARRNTADLVPQPV----VLQHDGIPPDFEFQF 123 Query: 300 NAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFH---KLKKIFGN 356 + VL NPP A + ++ ARR LK G+L++V + KL+++F Sbjct: 124 DHVLLNPPIRAGKAT----VFRLYEEARRALKPGGKLWVVIQKKHGAPSTEVKLRELFER 179 Query: 357 CTTIATNNKFVVLKAVK 373 + V AV+ Sbjct: 180 VDVAHRKAGYFVFCAVR 196 Score = 49.8 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 42/147 (28%), Gaps = 6/147 (4%) Query: 41 DTEIRGPVLILNDAFGALSCALAEHKP---YSIGDSYISELATRENLRLNGIDESSVKFL 97 D L L +G ++ LA P + + D + + + + V Sbjct: 53 DLTGAASALDLGCGYGPVTAILARVYPGVQWWMIDVNRRAVELARRNTADLVPQPVVLQH 112 Query: 98 DS-TADYPQQPGVVLIKVP--KTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLEL 154 D D+ Q VL+ P A + + R+ + ++ + + ST Sbjct: 113 DGIPPDFEFQFDHVLLNPPIRAGKATVFRLYEEARRALKPGGKLWVVIQKKHGAPSTEVK 172 Query: 155 FEKVLGPTTTTLAWKKARLINCTFNEP 181 ++ + P Sbjct: 173 LRELFERVDVAHRKAGYFVFCAVRESP 199 >UniRef50_A1AW50 Methyltransferase small n=5 Tax=Gammaproteobacteria RepID=A1AW50_RUTMC Length = 199 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 11/205 (5%) Query: 172 RLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE 231 R + + P+L T+ L G D T+ VFS +D G FM+HL + + + Sbjct: 3 RDMFTKKDIPRLKQDL-TIQTNLLGIDLTLKTRWGVFSPRSIDDGTELFMKHLRISNDDK 61 Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 +DLGCG G IGL + PQ +V VD+ +AV S +NV+ N ++ + ++NA Sbjct: 62 CLDLGCGYGPIGLAVAKSCPQGEVHMVDKDFVAVELSNINVKLN---HINNAQAYLSNAF 118 Query: 292 SGVEP-FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK- 349 V F+ +L N P + + + A LK NG++ V+ L +F K Sbjct: 119 LSVNKTNYFDKILSNVP----AKVGREQLSIILYDAYDALKPNGKIMFVSINGLRHFIKD 174 Query: 350 -LKKIFGNCTTIATNNKFVVLKAVK 373 K +FGN + K+ + +A+K Sbjct: 175 NFKSVFGNYKKLKQGQKYTISQAIK 199 >UniRef50_C7R3H0 Methyltransferase small n=2 Tax=Micrococcineae RepID=C7R3H0_JONDD Length = 225 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 78/211 (36%), Gaps = 22/211 (10%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGN 239 P D + + +L+G D + A VFS +D G ++ + G +VD+GCG Sbjct: 18 SPTSKDDTRVIPVRLDGRDVEVMTSAGVFSPGHIDTGTSVLLRTVGAPPSGTVVDVGCGW 77 Query: 240 GVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRF 299 G I LT+ +NP A+V VD + +VA + N + ++ + ++ Sbjct: 78 GPIALTMAMRNPDAQVWAVDVNERSVALTARNAQRLDLHCINAV--LASDIPEDFV---V 132 Query: 300 NAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF---HKLKKIFGN 356 + + NPP + L+ G V RHL + F Sbjct: 133 DELWSNPPIRIGKE----ALHALITQWLVRLRPGGRAVWVVQRHLGADSLMRWMNAQFAG 188 Query: 357 ----------CTTIATNNKFVVLKAVKLGRR 377 T A+ F VL+ V + + Sbjct: 189 EDRVTPGRYVTTKRASAKGFRVLETVHVAEQ 219 >UniRef50_C8P1I9 Methyltransferase domain protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1I9_ERYRH Length = 194 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 85/200 (42%), Gaps = 16/200 (8%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQ-HLPENLEGEIVDLGC 237 + L + + ++ +++ + VFS+ GLD G ++ + + L+G++ DLGC Sbjct: 7 DNSNLNKNRRDIPFRFLDISFSVISDDGVFSKDGLDRGTEALLKVCVDQPLKGKVADLGC 66 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G GV+G+ L ++ VD +P +V + +N E +++ + + L Sbjct: 67 GIGVVGVILSHFFSDLEMTGVDVNPRSVELANINYEKYNVNGINKIQ----DGL----DG 118 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLD---YFHKLKKIF 354 ++ V+ NPP + +F +A L +G V + K + +F Sbjct: 119 MYDFVISNPPIRVGKEKMYS----LFDNAYDVLNKDGMFIFVIRKSHGAKSAQAKCEALF 174 Query: 355 GNCTTIATNNKFVVLKAVKL 374 GNC + + + A K Sbjct: 175 GNCELLKKEKGYYIYCASKR 194 >UniRef50_A9BIP2 Methyltransferase small n=11 Tax=Thermotogaceae RepID=A9BIP2_PETMO Length = 225 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 77/183 (42%), Gaps = 12/183 (6%) Query: 196 GTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKV 255 G + + V+ + +D + ++ + E +++D+GCG GVIG++L + P + Sbjct: 52 GHKYLFKAPSGVYGKKRIDRASILLIEKV-ELTNEKVLDMGCGYGVIGISLKREFPDIDL 110 Query: 256 VFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALT 315 D + AV S + N N E F+ ++ NPP Sbjct: 111 YMSDVNNRAVDFS----KINAKNNNVNAVIKQGNLFKPWEDDYFDVIVSNPPIVAGKE-- 164 Query: 316 DNVAWEMFHHARRCLKINGELYIVA--NRHLDYFHK-LKKIFGNCTTIATNNKFVVLKAV 372 V E+ + L NG++Y+VA N+ +++IFGN + + F V ++ Sbjct: 165 --VLHELIEESYHHLNENGKIYLVAYHNKGGKALESYMEQIFGNVKELEKSGGFRVYLSI 222 Query: 373 KLG 375 K G Sbjct: 223 KRG 225 >UniRef50_C0W0F2 Possible 16S rRNA methyltransferase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W0F2_9ACTO Length = 218 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 81/207 (39%), Gaps = 8/207 (3%) Query: 171 ARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL-E 229 +++ T P T+ + L G D + VFS + LD G + ++ +PE Sbjct: 16 SKVHYFTDVPPATKAEMSTLEFSLRGFDLQMQVADQVFSASRLDPGTKVLLKEVPEPPAS 75 Query: 230 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINN 289 G +D+GCG GVI L +P AK+ VD + A+ ++ N N ++ Sbjct: 76 GRFLDVGCGWGVISTLLGKFSPDAKIWAVDVNGRALDLTKRNANANGCTNVETYYAHEAL 135 Query: 290 ALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF-- 347 + E +F+ + NPP A T ++ L G +++ ++L Sbjct: 136 EKARAEGLQFDLIWSNPPIRVGKAET----HQILLDWLSLLADEGVAWLIVAKNLGADSL 191 Query: 348 -HKLKKIFGNCTTIATNNKFVVLKAVK 373 L A+ F +L+ + Sbjct: 192 TTWLNDQGFQAEKAASKKGFRLLRVTR 218 >UniRef50_C7RA23 Methyltransferase small n=3 Tax=Gammaproteobacteria RepID=C7RA23_KANKD Length = 197 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 45/195 (23%), Positives = 72/195 (36%), Gaps = 10/195 (5%) Query: 181 PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG 240 P L Q L +FS +D G ++++ +DLGCG G Sbjct: 10 PGLKQDLQ-FEDTLCDFPLQFKTTWGLFSPRNIDDGTIMLLKYMDIETTDNCLDLGCGYG 68 Query: 241 VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFN 300 +G+T+ + PQ + + VD+ +AV + N E N ++N S V FN Sbjct: 69 ALGITMAKQAPQGQTLMVDKDFVAVDYANKNCELNGV---TNATARLSNGFSAVTEKNFN 125 Query: 301 AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLD--YFHKLKKIFGNCT 358 + N P + + + + A L+ G Y+V L K+IFGN Sbjct: 126 VICSNIP----AKVGNELLYIFLQDAWDRLEPGGTFYVVTITGLREFMKKAFKEIFGNYK 181 Query: 359 TIATNNKFVVLKAVK 373 + V K Sbjct: 182 KHKQGPAYTVASGTK 196 >UniRef50_Q6AE06 Putative uncharacterized protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6AE06_LEIXX Length = 203 Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 17/204 (8%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPE-NLEGEIVDLGC 237 P+ ++ + +L G + + + +FS +D+G R + H+P G+ +DLGC Sbjct: 10 PAPESETNLRSFTARLAGQTYELVTASGIFSPERIDMGTRVLLDHVPPAPPSGQFLDLGC 69 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEF-MINNALSGVEP 296 G G + LTL ++P A V VD + A+ R N E + ++ + + L Sbjct: 70 GWGPLALTLALESPHATVWAVDVNTRALDVVRRNAEKLGLKNVNPVTPDRVPDGLE---- 125 Query: 297 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLD---YFHKLKKI 353 F + NPP + L+ ++V R+L ++ Sbjct: 126 --FTTIWSNPPIRVGKNE----LHTILKRWLPRLEPGSNAWLVVQRNLGSDSLHRWIEGA 179 Query: 354 FGNCTT--IATNNKFVVLKAVKLG 375 TT A + + VL+A + Sbjct: 180 LPELTTSRAAISKGYRVLRARRPS 203 Score = 44.5 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 45/159 (28%), Gaps = 7/159 (4%) Query: 29 EAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNG 88 + LL + G L L +G L+ LA P++ + + +R N Sbjct: 45 DMGTRVLLDHVPPAPPSGQFLDLGCGWGPLALTLALESPHATVWAVDVNTRALDVVRRNA 104 Query: 89 --IDESSVKFLDSTADYPQ-QPGVVLIKVP--KTLALLEQQLRALRKVVTSDTRIIAGAK 143 + +V + + + P L L+ + + + Sbjct: 105 EKLGLKNVNPVTPDRVPDGLEFTTIWSNPPIRVGKNELHTILKRWLPRLEPGSNAWLVVQ 164 Query: 144 ARDIHTSTLELFEKVLGPTTTTLAW--KKARLINCTFNE 180 S E L TT+ A K R++ Sbjct: 165 RNLGSDSLHRWIEGALPELTTSRAAISKGYRVLRARRPS 203 >UniRef50_A1SNI3 Methyltransferase small n=4 Tax=Actinomycetales RepID=A1SNI3_NOCSJ Length = 205 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 73/196 (37%), Gaps = 11/196 (5%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGN 239 +P + + + ++ G + T+ + + VFSR LD + ++G +DLGCG Sbjct: 10 DPSVPFEREPFTCEVWGRELTLVSGSGVFSRGHLDHATAVLFRETEPPVQGRFLDLGCGY 69 Query: 240 GVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRF 299 GVIGL + P A + +D + A+A + N + F+ + Sbjct: 70 GVIGLAIAAAVPLASITAIDVNDRAIALANENARAMRVDG----RFVACRPEQVPTNEVY 125 Query: 300 NAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY---FHKLKKIFGN 356 + + NPP E+ L G +V ++L L + Sbjct: 126 DEIWSNPPIRIGK----QALHELLLTWLPRLAPGGRAVMVVGKNLGADSLQRWLGEQGWP 181 Query: 357 CTTIATNNKFVVLKAV 372 +A+ F VL + Sbjct: 182 TERLASARGFRVLVSR 197 Score = 42.1 bits (98), Expect = 0.034, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 45/160 (28%), Gaps = 7/160 (4%) Query: 29 EAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSY-ISELATRENLRLN 87 + A L ++ + ++G L L +G + A+A P + + +++ A Sbjct: 44 DHATAVLFRETEPP-VQGRFLDLGCGYGVIGLAIAAAVPLASITAIDVNDRAIALANENA 102 Query: 88 GIDESSVKFLDSTADYPQQ---PGVVLIKVPK--TLALLEQQLRALRKVVTSDTRIIAGA 142 +F+ + + P L + L + R + Sbjct: 103 RAMRVDGRFVACRPEQVPTNEVYDEIWSNPPIRIGKQALHELLLTWLPRLAPGGRAVMVV 162 Query: 143 KARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQ 182 S + PT + + R++ Sbjct: 163 GKNLGADSLQRWLGEQGWPTERLASARGFRVLVSRAAAEP 202 >UniRef50_C0QWV8 Methyltransferase small domain protein n=2 Tax=Brachyspira RepID=C0QWV8_BRAHW Length = 213 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 46/185 (24%), Positives = 77/185 (41%), Gaps = 8/185 (4%) Query: 190 VSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDK 249 + ++ D ++ +FS +DIG + + E +I+DLGCG GV+G+ Sbjct: 4 IEIAIKNIDLKFTSNDKLFSPKNIDIGTLSMINEINFEDENKILDLGCGYGVVGILAAKI 63 Query: 250 NPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFH 309 + KVV D AV S+ N N + ++ L + F+ +L NPP+H Sbjct: 64 IGEDKVVMCDIDAEAVEISKHNAVLNNVS---NINIIQSDGLRNIIDNDFSMILSNPPYH 120 Query: 310 QQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVL 369 +VA L +NG+ +V R Y +KL +FG N + + Sbjct: 121 ----TDFSVAKHFIESGFYKLALNGKFVMVTKRLDWYKNKLSSVFGGVKVKEIN-GYYIF 175 Query: 370 KAVKL 374 + K Sbjct: 176 ISEKR 180 >UniRef50_B8I4M1 Methyltransferase small n=2 Tax=Bacteria RepID=B8I4M1_CLOCE Length = 196 Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 43/189 (22%), Positives = 75/189 (39%), Gaps = 7/189 (3%) Query: 185 DAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGL 244 A + + +++G VFS +D G + +++DLGCG GV+G+ Sbjct: 2 SAIRLIETEIKGIKMKFKTSGKVFSPQNIDRGTLAMLSLADFKEGDKVLDLGCGYGVVGI 61 Query: 245 TLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLC 304 V+ D A+ + N N D + + ++ ++ F+ +L Sbjct: 62 LASKIVGPENVIMTDVDENAIKLAIENALINSV---DSIKILKSDGFKELKESGFSIILS 118 Query: 305 NPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNN 364 NPP+H +VA E L + G + +V R Y +KL IFG C + Sbjct: 119 NPPYH----TDFSVAKEFVEKGFNRLIVGGRMIMVTKRKDWYKNKLTSIFGGCKACEIDG 174 Query: 365 KFVVLKAVK 373 FV + + Sbjct: 175 YFVFVTEKR 183 >UniRef50_Q1II29 Modification methylase, HemK family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1II29_ACIBL Length = 280 Score = 153 bits (388), Expect = 7e-36, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 84/267 (31%), Gaps = 37/267 (13%) Query: 141 GAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINC--------TFNEPQLADAPQTVSW 192 A S L L L R + + Q ++ Sbjct: 16 AADTPSPRLSAELLLMFSLNCDRAYLFTYPERELTADEQARYDEAIARRCHGEPAQYITG 75 Query: 193 KLEGTDWTIHNHANV-FSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNP 251 E V R + ++ P + E++D+G G+G I TL + P Sbjct: 76 HQEFYGRDFLVSPAVLIPRPETEHLIEAVLELAPREVRWEVLDVGTGSGCIAATLAKEFP 135 Query: 252 QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR-FNAVLCNPPFHQ 310 + KV VD SP A+ ++ N + EF +++ LS +EP R F+ ++ NPP+ Sbjct: 136 RMKVTAVDISPEALQIAQANAARLEAQ----VEFRVSDLLSAIEPGRQFDMIVSNPPYVG 191 Query: 311 ---------------------QHALTDNVAWEMFHHARRCLKINGELYI-VANRHLDYFH 348 ++ + LK G + + D H Sbjct: 192 ECEADKVQRQVKDFEPHCAVFGGERGMDIIKRLAPQVWEHLKPGGWFLMEIGYSIADPVH 251 Query: 349 KLKKIFGNCTTIATNNKF-VVLKAVKL 374 ++ + + N + V+ K Sbjct: 252 EIMRDWTNFKVVPDLRGIPRVVVGRKP 278 >UniRef50_D1A2Z3 Methyltransferase small n=2 Tax=Streptosporangineae RepID=D1A2Z3_THECD Length = 228 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 13/198 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL-EGEIVDLGC 237 P+ A +TV L + VFS +D G R ++ +P EG+++D+GC Sbjct: 25 ERPEAAGRRRTVHLVLPDVHLRLTTDRGVFSPDRIDPGTRILLETVPAPPAEGDLLDVGC 84 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G G I L + ++P+A+V VD + A+ +RLN T + Sbjct: 85 GYGPIALAMALRSPRARVYGVDVNERALQLARLNARTAGIGNASFHRPEQID-----PAM 139 Query: 298 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLD---YFHKLKKIF 354 RF A+ NPP A E+ L Y+V ++HL L++ Sbjct: 140 RFAALWSNPPIRIGKA----ALHELLTTWLARLLPGATAYLVVHKHLGSDSLHRWLQQQG 195 Query: 355 GNCTTIATNNKFVVLKAV 372 IA+ + + VL Sbjct: 196 WPTERIASRSAYRVLAVT 213 Score = 40.6 bits (94), Expect = 0.091, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 7/167 (4%) Query: 29 EAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYI----SELATRENL 84 + LL+ + G +L + +G ++ A+A P + + R N Sbjct: 60 DPGTRILLETVPAPPAEGDLLDVGCGYGPIALAMALRSPRARVYGVDVNERALQLARLNA 119 Query: 85 RLNGIDESSVKFLDSTADYPQQPGVVLIKVPK--TLALLEQQLRALRKVVTSDTRIIAGA 142 R GI +S + D + + P A L + L + Sbjct: 120 RTAGIGNASFHRPEQI-DPAMRFAALWSNPPIRIGKAALHELLTTWLARLLPGATAYLVV 178 Query: 143 KARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQT 189 S ++ PT + R++ T + A + Sbjct: 179 HKHLGSDSLHRWLQQQGWPTERIASRSAYRVLAVTAHPDAPAAPSRQ 225 >UniRef50_Q47PA1 16S rRNA m(2)G 1207 methyltransferase n=1 Tax=Thermobifida fusca YX RepID=Q47PA1_THEFY Length = 205 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 77/204 (37%), Gaps = 15/204 (7%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL-EGEIVDLGC 237 ++P TV+ L + VFS +D+G R ++ +P G ++DLGC Sbjct: 8 SDPTAPSRTATVTLLLPDLHLRLATDRGVFSPDRIDLGTRILLETVPPPPDHGTLLDLGC 67 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN----NALSG 293 G G I L + + P+A VV +D + A+A +R N E N F + + Sbjct: 68 GYGPIALAMALRAPKATVVGIDTNQRALALARRNAEANAV---PNVSFHRAPGPEDPVDP 124 Query: 294 VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY---FHKL 350 + F A+ NPP + L + V ++HL L Sbjct: 125 LLRGPFAALWSNPPIRIGK----QALHTLLTTWLDRLADGAYAHSVVHKHLGADSLHRWL 180 Query: 351 KKIFGNCTTIATNNKFVVLKAVKL 374 +A+ + +L+ ++ Sbjct: 181 DASGYPTDRVASRAGYRILRTMRR 204 >UniRef50_D0MJN4 Modification methylase, HemK family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MJN4_RHOM4 Length = 304 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 85/270 (31%), Gaps = 45/270 (16%) Query: 119 ALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTT---------TLAWK 169 LL+Q ++ L D R + + +VLG + A + Sbjct: 20 ELLQQAIQRLEAAGVPDAR-----------RNAEWMLCEVLGCSRAQLYAYPERPVDAAR 68 Query: 170 KARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVF-SRTGLDIGARFFMQHLPENL 228 +AR + Q V +E + V R + +Q L Sbjct: 69 RAR-FAELLARRLRREPLQYVLGYVEFLGLRLEVGPGVLVPRPETEWLTERVLQELQSTP 127 Query: 229 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN 288 ++D+G G+G I L + A V D SP A++ +R N E + ++ Sbjct: 128 GPRVLDVGTGSGCIALAIKHHRSDADVWACDISPEALSIARRNAERLGLQVHWVEADVLA 187 Query: 289 NALSGVEPFRFNAVLCNPPFHQQHALTDNVAW-----------------EMFHHARRC-- 329 ++ P F+ ++ NPP+ H + + R Sbjct: 188 DSFPENVPGPFDLIVSNPPYLALHEADELPPEVRDYEPPVALYAGEDPLRFYRALARHGH 247 Query: 330 --LKINGELYIVANRHLDYFHKLKKIFGNC 357 LK G L + H Y + +F C Sbjct: 248 VLLKPGGRLACEVHAH--YGTDVVALFEAC 275 >UniRef50_B5GW92 Methyltransferase n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GW92_STRCL Length = 209 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 13/202 (6%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLP-ENLEGEIVDLGCG 238 +P +A P V +LE + + VFS + LD G + +++ P G+I+DLGCG Sbjct: 13 DPGVASRPGQVRVELEDVQLDLRTDSGVFSHSRLDPGTKVLLENAPLPRNRGDILDLGCG 72 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 G I LT + + +V VD + A+ R N ET + + E R Sbjct: 73 YGPIALTFATRRKRLRVWAVDVNERALGLVRENAETARLG---NVTACLPD--EVPEDVR 127 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLD---YFHKLKKIFG 355 F + NPP A M L+ G Y+V +HL L Sbjct: 128 FGTIYSNPPIRIGKAE----MHAMLLRWLPLLQDGGTAYLVVQKHLGSDSLAKWLDAQGL 183 Query: 356 NCTTIATNNKFVVLKAVKLGRR 377 + ++ + +L+ K R Sbjct: 184 PAARLLSHRGYRLLEVQKSSDR 205 >UniRef50_A9WGP8 Methyltransferase small n=5 Tax=Chloroflexaceae RepID=A9WGP8_CHLAA Length = 207 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 41/193 (21%), Positives = 72/193 (37%), Gaps = 10/193 (5%) Query: 188 QTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPE--NLEGEIVDLGCGNGVIGLT 245 + +++ G + +FS +D G ++ + I+D+GCG GVIG+ Sbjct: 14 KRITYVWRGQQFAFDVAHTIFSSFQIDEGTDLLLRLIEPAFPEPQRILDVGCGCGVIGIC 73 Query: 246 LLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCN 305 L + PQA V VD+ +AV +R N E N A + + LS P ++ ++ N Sbjct: 74 LARRFPQADVTLVDKDLLAVRYARHNAELN---ATTNVTVLGSVGLSEAPPGPYDLIVSN 130 Query: 306 PPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY--FHKLKKIFGNCTTIATN 363 + E R L+ GE + V L++ + I Sbjct: 131 ---IPAKIGDYAIEHEFILEPLRHLRPGGEYWFVVVSGLNHLIPRLGPRHNLRLKEIKKR 187 Query: 364 NKFVVLKAVKLGR 376 V + + Sbjct: 188 AGHSVYRIIAPAA 200 >UniRef50_A5WBH5 Methyltransferase small n=5 Tax=Gammaproteobacteria RepID=A5WBH5_PSYWF Length = 202 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 10/187 (5%) Query: 190 VSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDK 249 + ++ G +FS LD G+ + H+ + + +DLGCG GV+G+T + Sbjct: 22 FTQEVLGAPMHFTTTWGIFSPEKLDAGSLMLLDHIDFQSDDDSIDLGCGYGVLGMTAARE 81 Query: 250 NPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR-FNAVLCNPPF 308 PQ + +D+ MAV +R N + N + ++N + V+P + F+ V+ N P Sbjct: 82 CPQGQHTLIDKDFMAVEYARRNCQNNGLS---NVDVHLSNGFNHVDPNKDFSLVMSNLPA 138 Query: 309 HQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK--LKKIFGNCTTIATNNKF 366 A ++ G Y+V L F K ++FGN + + Sbjct: 139 KVGKEQHYL----YLLDAYSKMRTGGRFYVVTINGLRQFMKRAFTEVFGNADKVKQGKTY 194 Query: 367 VVLKAVK 373 + +A+K Sbjct: 195 TITRAIK 201 >UniRef50_B3E629 Protein-(Glutamine-N5) methyltransferase, release factor-specific n=8 Tax=Geobacter RepID=B3E629_GEOLS Length = 286 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 71/215 (33%), Gaps = 37/215 (17%) Query: 174 INCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE-I 232 + Q + E +V D + + + + Sbjct: 64 YRSMVARRGKREPLQHILGSQEFDGLEFIVTRDVLIP-RFDTET-LLEEAVRQAPTARTV 121 Query: 233 VDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 292 +D+G G+G I ++L + PQA + VD SP A++ +R N E N + EF++ + Sbjct: 122 LDIGTGSGCIAISLFHRLPQAAITAVDLSPDALSIARRNAERNNAQ----IEFLLGSFFQ 177 Query: 293 GVEPFRFNAVLCNPPFH---------------------QQHALTDNVAWEMFHHARRCLK 331 V RF+ ++ NPP+ + + A R L+ Sbjct: 178 PVSERRFDLIVSNPPYITSADLADLQPEVRDFEPRLALDGGTDGLDAYRVLAAEAPRYLE 237 Query: 332 INGELYIVANRHLDYFHKLKKIFGNCTTIATNNKF 366 NG L + D + T+ + F Sbjct: 238 PNGWLLLEIGAGQD---------KDVATLLADAGF 263 >UniRef50_A1ATD2 Modification methylase, HemK family n=3 Tax=Bacteria RepID=A1ATD2_PELPD Length = 288 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 63/211 (29%), Gaps = 34/211 (16%) Query: 174 INCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQ-HLPENLEGE- 231 + Q + E +V ++ L Sbjct: 63 FRQMVARRARREPLQHILGSQEFCGLEFAVSPDVLIPRH---DTETLVEEALRRAPLART 119 Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 ++D+G G+G I ++L + P A++V D S +A+ +R N N + EF+ + L Sbjct: 120 VLDIGTGSGCIAVSLARRLPGARIVASDISAVALEMARANARANGVD----VEFLHGSLL 175 Query: 292 SGVEPFRFNAVLCNPPFHQ---------------------QHALTDNVAWEMFHHARRCL 330 V F+ ++ NPP+ ++ + + L Sbjct: 176 EPVAGRCFDLIVSNPPYIPSADIQLLEPEVRDGDPRLALDGGPDGLDIYRRLIPASLEHL 235 Query: 331 KINGELYIVANRHLDYFHK----LKKIFGNC 357 + G L + L +G Sbjct: 236 EPGGWLLLEVGMGQAQDVAEMFPLADGYGQV 266 >UniRef50_Q2LWV0 Peptide release factor-glutamine N5-methyltransferase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LWV0_SYNAS Length = 316 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 79/240 (32%), Gaps = 38/240 (15%) Query: 165 TLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL 224 ++ ++ + Q + + + E V ++ + Sbjct: 76 DVSAREMDGFSFWVARRQKGEPVAYIIGRKEFWSLDFAVDPRVLIPR---PDTEVLVEEV 132 Query: 225 PENLE------GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE 278 + L EI+DLG G+G I + L + P A++ D S A+A S N E + Sbjct: 133 IKVLGSGRASRPEILDLGTGSGAIAVALAHECPHARITATDISRKALAVSAGNAERHGV- 191 Query: 279 ALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ---------------------QHALTDN 317 R F+ N L V +F+ ++ NPP+ + Sbjct: 192 -ASRITFLEGNLLDPVM-GKFDVIVSNPPYIDSGDYARLSAEVRNFEPREALLAGEQGMD 249 Query: 318 VAWEMFHHARRCLKINGELYI-VANRHLDYFHKLKKIFGNCTTIATNNKF----VVLKAV 372 + A LK G L + + + + ++L + +A + V+KA Sbjct: 250 FYSAIIPQAACRLKPGGWLLLEIGDSQKENLNRLFQQSDAYQDLAFRKDYAGRWRVVKAK 309 >UniRef50_C1F2J0 Ribosomal protein L11 methyltransferase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F2J0_ACIC5 Length = 294 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 81/255 (31%), Gaps = 32/255 (12%) Query: 149 TSTLELFEKVLGPTTT--------TLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWT 200 L + VLG + ++ + Q + + E Sbjct: 38 RDAELLLQHVLGRNRAWLIVHSDDAMTAEQVTQFESWILRRAAQEPVQYIVGEQEFWGLR 97 Query: 201 IHNHANV-FSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVD 259 + +V R + ++ LPE + D+G G+G I + L PQA V +D Sbjct: 98 LRVTPDVLIPRPETEHLVEAALERLPEGETVRVADIGTGSGAIAIALAASRPQALVTALD 157 Query: 260 ESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHA------ 313 S A+ +R N + +R F+ ++ L+ V RF ++ NPP+ Sbjct: 158 LSEAALRIARENAAAHGV--AERMRFLQSDLLAAVRGERFAMIVSNPPYVPGGEELEPQV 215 Query: 314 -------------LTDNVAWEMFHHARRCLKINGELYIVANRHLD-YFHKLKKIFGNCTT 359 +V + A L+ G L + +L + + Sbjct: 216 RDFEPHSALFAGAEGLDVYRRLIPEAAEVLEPGGWLLMEIGHGQRAALAELLAGWDDIAF 275 Query: 360 IATNNKF-VVLKAVK 373 + V+ A K Sbjct: 276 VDDLQGIPRVVMARK 290 >UniRef50_Q0FKY0 Methyltransferase, putative n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FKY0_9RHOB Length = 210 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 11/210 (5%) Query: 167 AWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPE 226 + + + T + AD + + + G + VFS D G+ + LPE Sbjct: 12 SKAHGKTVWFTATDA-FADWAREAAPNVHG----LWTAPGVFSADAPDPGSAALLAALPE 66 Query: 227 NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFM 286 L ++ DLG G G +G LL ++ + V+ A +R NV R +F Sbjct: 67 KLGAQVADLGAGWGGLGAGLLTRDGIRTLHMVEADHAAFECARRNVTD------PRVQFH 120 Query: 287 INNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY 346 +A + P +AV+ NPPFHQ ++ AR+ LK +G+L++VANRHL Y Sbjct: 121 WADATTWTPPELLDAVVMNPPFHQGRRADPSLGQAFITAARKMLKPSGQLWLVANRHLPY 180 Query: 347 FHKLKKIFGNCTTIATNNKFVVLKAVKLGR 376 L F N IA +++F +L + R Sbjct: 181 ETTLAAQFRNSDEIAGDSRFKILHGSRPNR 210 >UniRef50_Q93NC8 Protoporphyrinogen oxidase HemK n=3 Tax=Myxococcales RepID=Q93NC8_MYXXA Length = 293 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 73/238 (30%), Gaps = 39/238 (16%) Query: 166 LAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQH-- 223 L+ + + Q ++ E + A V ++ Sbjct: 54 LSKDELGAYRALIERRMAGEPTQYLTGVREFYNRPFKVDARVLIPR---PETELLVEAAL 110 Query: 224 --LPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALD 281 LP++ G +DL G+G I ++L + PQA V+ D SP A A +R N + D Sbjct: 111 RMLPKDAPGRALDLCTGSGCIAISLAAERPQATVIATDLSPDACALARENAQALGV--AD 168 Query: 282 RCEFMINNALSGVE-PFRFNAVLCNPPFHQ--------------------QHALTDNVAW 320 R + + + V RF V+ NPP+ Sbjct: 169 RVTVLQGDLFTPVPAGERFQVVVSNPPYIASGEIPGLSAEVRREPTLALDGGPDGLVAVR 228 Query: 321 EMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR 378 + AR+ L+ G L + + + + + K RR Sbjct: 229 RVVTGARQWLEPGGLLALEIG---------EDQGPAVLELLRAAGYADARVEKDLERR 277 >UniRef50_Q1N3L9 Modification methylase, HemK family protein n=1 Tax=Bermanella marisrubri RepID=Q1N3L9_9GAMM Length = 281 Score = 146 bits (370), Expect = 9e-34, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 83/238 (34%), Gaps = 33/238 (13%) Query: 158 VLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGA 217 + + T L+ ++ + + + + D TI G Sbjct: 42 LFTHSDTELSQEQYLQFTQLLERRKQGEPVAYIIGQTGFWDLTIKVSPATLIPRG---DT 98 Query: 218 RFFMQHLPENLEGE-IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM 276 M ++ E+ + ++DLG G G + L + PQA VV VD AVA ++ N + N Sbjct: 99 ESLMDYIVEHFNPKNVLDLGTGTGALALATAKEYPQASVVAVDVIEEAVALAKENAKLNK 158 Query: 277 PEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHA--------------------LTD 316 E + ++ + V RF+ ++ NPP+ + Sbjct: 159 V---TNVEILQSDWFALVPKRRFDLIVSNPPYIDANDHHLGEGDVRYEPKSALVAERHGL 215 Query: 317 NVAWEMFHHARRCLKINGELYIV-ANRHLDYFHKL--KKIFGNCTT---IATNNKFVV 368 ++ + A L +G L + + + + F N T +A ++F + Sbjct: 216 ADIEKICNQALSFLTEDGCLMVEHGYDQGPHVRAIFSQSGFSNIETHQDLAGRDRFTL 273 >UniRef50_B8I1M7 Modification methylase, HemK family n=2 Tax=Clostridium RepID=B8I1M7_CLOCE Length = 285 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 79/267 (29%), Gaps = 44/267 (16%) Query: 138 IIAGAKARDIHTSTLELFEKVLGPTTT--------TLAWKKARLINCTFNEPQLADAPQT 189 I+ A + KVL T L+ + +++ + Q Sbjct: 13 ILKNANIEAPVHEAGVMLCKVLKCGRTYLYSHGDRELSIDEKAVLDHMLVQRTGNIPLQY 72 Query: 190 VSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQ----HLPENLEG---EIVDLGCGNGVI 242 + E V ++ L + G +++D+ G+G I Sbjct: 73 IVGDTEFMSLRFLVTPAVLIPRQ---DTELLVEKTIDLLNQGKTGTNKKVLDMCTGSGCI 129 Query: 243 GLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF-RFNA 301 +++ P+ +V D S A+ ++ N E N + +R E + ++ +F+ Sbjct: 130 AVSIAYFCPECSIVACDVSQKALDVAKANSELNGVQ--NRVELCCGDLFDAIKGGQKFDI 187 Query: 302 VLCNPPFH---------------------QQHALTDNVAWEMFHHARRCLKINGELYIVA 340 ++ NPP+ A + A L NG L Sbjct: 188 IVSNPPYIETDIIAGLQKEVRSYEPGLALDGGADGLVFYRRIISSAPERLNRNGWLAFEI 247 Query: 341 --NRHLDYFHKLKKIFGNCTTIATNNK 365 N+ +K+ F + Sbjct: 248 GYNQGEKVSALMKESFVDIQIFKDYGG 274 >UniRef50_Q0AHU0 Modification methylase, HemK family protein n=5 Tax=Betaproteobacteria RepID=Q0AHU0_NITEC Length = 293 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 65/186 (34%), Gaps = 24/186 (12%) Query: 174 INCTFNEPQLADAPQTVSWKLEGTDWTIHNHANV-FSRTGLDIGARFFMQHLPENLEGEI 232 + ++ + D +V R ++ + +P + I Sbjct: 67 FQQLLARRMAGEPVAYLTGERGFYDLVFDVTPDVLIPRPETELLVEMALSKIPPDRCCNI 126 Query: 233 VDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 292 +DLG G+G I +T+ P V VD SP+A+A +R N + E F+ + S Sbjct: 127 LDLGTGSGAIAITIARHRPDIYVTAVDLSPLALAVARRNAKRCSVE---NVVFIKADWFS 183 Query: 293 GVEPFRFNAVLCNPPFHQQHAL--------------------TDNVAWEMFHHARRCLKI 332 G +F+ ++ NPP+ + + + A L+ Sbjct: 184 GFISEKFDVIVANPPYIVEGDPHLEADGLRFEPTIALVAQNNGLDCIRRIVDQAPDYLEH 243 Query: 333 NGELYI 338 +G L + Sbjct: 244 SGWLML 249 >UniRef50_C8P9J5 Protein-(Glutamine-N5) methyltransferase n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P9J5_9LACO Length = 290 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 70/201 (34%), Gaps = 28/201 (13%) Query: 186 APQTVSWKLEGTDWTIHNHANVFSRT-GLDIGARFFMQHLPENLEGEIVDLGCGNGVIGL 244 Q + + V + + LP + E ++DLG G+GVIG+ Sbjct: 73 PAQYIVGQTSFYGRQFKVTPAVLVPEAETAELVEWVLAALPADRELRVLDLGTGSGVIGI 132 Query: 245 TLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLC 304 TL + P V D SP A+A +R N + + + ++ + + R++ ++ Sbjct: 133 TLALERPCWSVTLSDISPAALAVARENAQRHQLALP----LVESDLFANLADQRYDVIVT 188 Query: 305 NPPFHQQHAL---------------------TDNVAWEMFHHARRCLKINGELYIVANRH 343 NPP+ A +F A R L+ +G+L+ Sbjct: 189 NPPYIDPAATALMDQAVLENEPRVALFADEHGLGFYHRLFEQAGRHLRPSGQLF--GETG 246 Query: 344 LDYFHKLKKIFGNCTTIATNN 364 D ++ + C A Sbjct: 247 YDQEQSIQALLKRCDQQARMA 267 >UniRef50_B7CDV5 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDV5_9FIRM Length = 194 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 87/201 (43%), Gaps = 16/201 (7%) Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEI--VDL 235 F + DAP+ ++ + ++++A VFS+ LD G R ++ + +N + +DL Sbjct: 5 FTNDIVKDAPEEITIHFRDFTYKLNSNAGVFSKDKLDEGTRILLETVLDNQSEPVSCLDL 64 Query: 236 GCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE 295 GCG G I L L++ ++ +D + A + N++ +A C+ SG+ Sbjct: 65 GCGIGPIALILMEYWKYTEMTMIDVNQRACQLADSNMKKYRRKAKIICQ-------SGIN 117 Query: 296 PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHK---LKK 352 ++ +L NPP A + + +F L +G +IV + L++ Sbjct: 118 EGQYACILLNPPIRTGKA----MIYSLFDQCMEHLATDGHFWIVMRKQHGAQSAINYLQE 173 Query: 353 IFGNCTTIATNNKFVVLKAVK 373 +A + + V+K + Sbjct: 174 KGYEVEKVARDKGYWVMKISR 194 >UniRef50_C5C9V8 16S rRNA m(2)G 1207 methyltransferase n=17 Tax=Actinobacteria (class) RepID=C5C9V8_MICLC Length = 211 Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 43/207 (20%), Positives = 75/207 (36%), Gaps = 20/207 (9%) Query: 180 EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLE-GEIVDLGCG 238 +P + +T+ +L G D + +FS GLD G +P G +D+G G Sbjct: 14 DPSAPERRRTLRTRLAGRDVEVQTANGIFSPDGLDKGTAALFSAVPAPPATGRFLDVGAG 73 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 298 G I LTL ++P+A+V V+ + ++ +R N + + G E Sbjct: 74 WGPIALTLALRSPEAEVTAVEVNDRSLQLTRDNAAALGLGNV--VALRPEDVPEGAE--- 128 Query: 299 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCT 358 F+ + NPP + L GE ++V ++L L I Sbjct: 129 FDLIWSNPPIRIGKP----ALHALLERWLPRLAPGGEAWLVVQKNLGADSLLPWIGRMLE 184 Query: 359 TIA----------TNNKFVVLKAVKLG 375 A + F +L+ + Sbjct: 185 ERAPGRFTAERADSVKGFRILRVARAR 211 >UniRef50_C3X2B7 Methyltransferase HemK MTase hemK n=2 Tax=Oxalobacter formigenes RepID=C3X2B7_OXAFO Length = 287 Score = 143 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 65/216 (30%), Gaps = 35/216 (16%) Query: 154 LFEKVLGPTTT--------TLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHA 205 L E LG + L +A ++ + ++ E Sbjct: 35 LLEHALGFSRVKLITHSDHVLTDAEANAVSDVLARRLRGEPVAYITGIREFYGLPFAVTP 94 Query: 206 NVFSRTGLDIGARFF--MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPM 263 +V + G +VDLG G+G I + + P A+V D S Sbjct: 95 DVLIPR---PETELLVDLALARLPEGGRVVDLGTGSGAIAVAIAAMRPDAQVWATDISGK 151 Query: 264 AVASSRLNVETNMPEALDRCEFMINNALSGVEPF-RFNAVLCNPPFHQQHA--------- 313 A+ +R N + + F N +EP RF+ ++ NPP+ Sbjct: 152 ALDIARKNAA-SCLKNGQSVRFRQGNWYEALEPGSRFDLIVSNPPYIHSADEHLRKGDLR 210 Query: 314 -----------LTDNVAWEMFHHARRCLKINGELYI 338 + + A LK GEL + Sbjct: 211 FEPLSALTDYTDGLSAMDILIDQAPAYLKKGGELLM 246 >UniRef50_UPI00016C046B modification methylase, HemK family protein n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C046B Length = 281 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 81/244 (33%), Gaps = 23/244 (9%) Query: 127 ALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARL--------INCTF 178 +++V+ T+I+ K D L +L TL +L Sbjct: 3 TVKEVLAYGTQILNQNKIGDATRDARLLLMHLLSCDRATLIINNDKLVEEEIVATYFKYI 62 Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQ---HLPENLEGEIVDL 235 + + + Q ++ E + NV ++ LP N +++ Sbjct: 63 DRRKNHEPLQYITHYQEFMGLPFYVDQNVLIPRQ---DTELLVEKLIALPWNHHPIGLEI 119 Query: 236 GCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE 295 G G+G I ++LL +V D S A+ + N N + R +F+ ++ + Sbjct: 120 GVGSGCISVSLLHYISNLTMVCSDISQAALDIAAKNASINAC--IPRIKFVHSDLFXNIP 177 Query: 296 PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG 355 +F+ ++ NPP+ + + + L +G L ++ + Sbjct: 178 QQKFDFIVSNPPYIPKCEMNQLQPEVLDFEPAAALTDSG-------DGLAFYRAIATEAK 230 Query: 356 NCTT 359 Sbjct: 231 KYEI 234 >UniRef50_D0WQY8 Putative methyltransferase small domain protein n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WQY8_9ACTO Length = 216 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 44/205 (21%), Positives = 68/205 (33%), Gaps = 13/205 (6%) Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPEN---LEGEIVDL 235 P +A L G ++ + VFS +D G + PE +DL Sbjct: 9 QSPSSDEATVERLVSLRGREYAVATSGGVFSADHVDKGTAVLLHKAPEPDLGPGDLAIDL 68 Query: 236 GCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE 295 GCG G + L L ++ P A V VD + A+ +R N L+ + Sbjct: 69 GCGWGPLTLALCEEAPGADVWAVDVNERALELTRKNAARAGFSPKALAADEA---LAALG 125 Query: 296 PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYF---HKLKK 352 + + NPP A E+ L +G Y+V R+L + Sbjct: 126 ERKIQLIWSNPPVRIGKAR----LHELLTTWIERLADDGAAYLVIQRNLGADSLRSWMLG 181 Query: 353 IFGNCTTIATNNKFVVLKAVKLGRR 377 C I + F V + R Sbjct: 182 QGWGCEKIGSAKGFRVFAVTRTPRE 206 >UniRef50_Q1J6M0 Peptide release factor-glutamine N5-methyltransferase n=12 Tax=Streptococcus pyogenes RepID=Q1J6M0_STRPF Length = 279 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 69/222 (31%), Gaps = 40/222 (18%) Query: 171 ARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGAR-----FFMQHLP 225 A L+ F +PQ ++ D + V ++L Sbjct: 52 AVLLEHIFCSLSQHLSPQYITGNAYFRDLKLAVDKRVLIPR---PETEELVDMILAENLD 108 Query: 226 ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEF 285 L ++D+G G+G I ++L + P +V D S A+ ++ N + + F Sbjct: 109 APL--NVLDIGTGSGAIAISLKKERPNWQVTASDISRAALDLAKANADAYQLD----ITF 162 Query: 286 MINNALSGVEPFRFNAVLCNPPFHQ---------------------QHALTDNVAWEMFH 324 + ++ S + F+ ++ NPP+ + ++ Sbjct: 163 IESDVFS-LISGTFDIIVSNPPYISYEDKEEVSLNVLQSEPHLALFAKENGYAIYRKIIE 221 Query: 325 HARRCLKINGELYIVANRHL--DYFHKLKKIF--GNCTTIAT 362 A L G+LY L+ F + + Sbjct: 222 QADNYLTKEGKLYFEIGYKQAEGIKDMLQAYFPQRHIRVVTD 263 >UniRef50_C3YPG1 Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3YPG1_BRAFL Length = 287 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 84/244 (34%), Gaps = 50/244 (20%) Query: 158 VLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGA 217 ++ P L ++ + + Q + + + D + VF Sbjct: 41 LISPLAQNLTAEERTKVWKLCEKRMNRMPIQYILGEWDFRDLNLVMRPPVFIPR---PET 97 Query: 218 RFFMQHL---------PENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASS 268 ++HL E E I+++GCG+G I L+LL + PQA VD + AV + Sbjct: 98 EELVEHLWLYLQEDLSREEEELGILEVGCGSGAISLSLLHEFPQAHCTAVDVTKEAVELT 157 Query: 269 RLNVETNMP-EALDRCEFMINNA----LSGVEPFRFNAVLCNPPFH-------------- 309 + N E + L+ +F++ + +F+ ++ NPP+ Sbjct: 158 QHNAERLGLCDRLNIIKFIVLSLNDIVFPADFETKFDVIVSNPPYIWTQDMGTLEQEIVG 217 Query: 310 -------QQHALTDNVAWEMFHHARRCLKINGELYIVA------------NRHLDYFHKL 350 + ++ H + LK G +++ N HL Y L Sbjct: 218 YENHCALHGGTDGMGLIRDIIHTGHKLLKPGGSIWLEVDPRHPDMIQTYLNNHLQYQLHL 277 Query: 351 KKIF 354 ++ Sbjct: 278 AGVY 281 >UniRef50_A1BHL4 Modification methylase, HemK family n=11 Tax=Chlorobiaceae RepID=A1BHL4_CHLPD Length = 301 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 84/286 (29%), Gaps = 53/286 (18%) Query: 127 ALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKAR--------LINCTF 178 + +++ + T + + S L VLG L R Sbjct: 12 QVVELLKTTTAFFVQKQVDEARISAELLLASVLGLDRLGLYLNHNRPVYPGELEAFRALC 71 Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLE--------- 229 + Q ++ + V ++H E L Sbjct: 72 RQRLEGKPVQYITGEQFFYGLPFFVDKRVLIPR---PETELLVEHALEFLGHVSAADVSE 128 Query: 230 --GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMI 287 ++D+G G+G I +TL + P V +D S A+ +R N E + DR F+ Sbjct: 129 AALHLLDIGTGSGCIAVTLASRLPCLMVTAIDISTEALVVARNNAERHGV--ADRIRFLH 186 Query: 288 NNALSGVEPFR-----FNAVLCNPPFHQQHA--------------------LTDNVAWEM 322 + S + R F+ ++ NPP+ + + Sbjct: 187 ADLFS-LPDERGLSAPFDVIVSNPPYIAEDEWAGLQPEVRLFEPQLALTTRDGIECYHAV 245 Query: 323 FHHARRCLKINGELYIV--ANRHLDYFHKLKK-IFGNCTTIATNNK 365 A LK G L A+ L +++ F + + + Sbjct: 246 AEVAPSLLKSGGMLCFESHADAALKVAGIMERWGFSSVAVMKDYSG 291 >UniRef50_UPI0000E87AD9 modification methylase, HemK family protein n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87AD9 Length = 283 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 53/286 (18%), Positives = 109/286 (38%), Gaps = 38/286 (13%) Query: 123 QQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKK--------ARLI 174 + +R+ RK + + + ++ AR+ + + VL T+T L + A LI Sbjct: 2 ESIRSYRKKIGIELQNLSTITAREAELEAQFILQFVLKETSTQLIIGRNKKISENDAGLI 61 Query: 175 NCTFNEPQLADAPQTVSWKLEGTDWTIH-NHANVFSRTGLDIGARFFMQHLPENLEGEIV 233 + L + + + T + N + R ++ +Q+ E+ +I+ Sbjct: 62 ESIVKQRLLGTPLAYLFKEWDFYGRTYYINQQTLIPRQDTELMIDILIQNNKEDSSLKIL 121 Query: 234 DLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG 293 DLG G+GVIGLTL A++ D S A+ +++N L +F+ +N Sbjct: 122 DLGTGSGVIGLTLAHHFFNAQITLSDISSEAIKVAKIN---GGNSGLKNIQFVESNWFEK 178 Query: 294 VEPFRFNAVLCNPPFHQQHAL--------------------TDNVAWEMFHHARRCLKIN 333 + P +F+ ++ NPP+ ++ ++ +A++ L Sbjct: 179 IPPGKFDVIVSNPPYIPKNDKHLKHPELLEQPQIALMSELGGLQAITDIVKNAKQYLNKA 238 Query: 334 GELYIVANRHLDYFHK----LKKIFGNCTTIAT-NNKFVVLKAVKL 374 G L ++ + F N N++ + VK+ Sbjct: 239 G-LLMIEHGFDQAPTVKNIFTANTFNNVRQYQDINSRIRITSGVKI 283 >UniRef50_D0KZK8 Protein-(Glutamine-N5) methyltransferase, release factor-specific n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZK8_HALNC Length = 286 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 79/239 (33%), Gaps = 22/239 (9%) Query: 121 LEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE 180 L + + R ++ D + ++ + L+ +++ + ARL F Sbjct: 9 LAELIDEARCLLGGDADAMVDIRSLVSQLAGLDRARQLMELERLLPSATAARL-RSAFER 67 Query: 181 PQLADAPQTVSWKLEGTDWTI-HNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGN 239 + ++ A + R + + ++ +P + DLG G+ Sbjct: 68 RAAGEPVAYITGFKPFWRHEFLVTPATLIPRPETEHLLEWALEKIPPQQALTVADLGTGS 127 Query: 240 GVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRF 299 GV+ ++L + PQ +V D S A+ +R N +A ++ + L +P Sbjct: 128 GVLAISLAIERPQIQVFGCDLSRDALLVARENESRLRADAALPIRWLQGSWLGMFKPESL 187 Query: 300 NAVLCNPPFH--------------------QQHALTDNVAWEMFHHARRCLKINGELYI 338 + ++ NPP+ ++ A LK G + Sbjct: 188 DVIVSNPPYIRPDDPHLAIGDLRFEPQSALVAQDEGMADYRQIIEQASTRLKPGGWILF 246 >UniRef50_B0MTH4 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MTH4_9BACT Length = 282 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 65/187 (34%), Gaps = 35/187 (18%) Query: 182 QLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE---IVDLGCG 238 Q V E V ++ + E+ + ++D+G G Sbjct: 64 AAGRPLQYVLGHTEFYGLDFQVREGVLIPR---PETEELVRWIAESPAPDNPAVLDVGTG 120 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF- 297 +G I +TL P A+V VD S A++ +R N E +F +AL + P Sbjct: 121 SGCIAVTLARLIPGARVTAVDISEKALSIARENARRLDAE----VDFRQGDALGELFPGQ 176 Query: 298 --RFNAVLCNPPFHQQHA--------LTDNVAWEMF--------------HHARRCLKIN 333 +F+ ++ NPP+ + A +F +ARR L+ Sbjct: 177 REQFDLIVSNPPYIPRREKASMRVNVTGYEPAEALFVEDDDPLIFYRAIARNARRLLRPG 236 Query: 334 GELYIVA 340 G LY Sbjct: 237 GRLYFEI 243 >UniRef50_A3ZUD0 HemK protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZUD0_9PLAN Length = 294 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 68/226 (30%), Gaps = 42/226 (18%) Query: 150 STLELFEKVLGPTTTTLAWKKARL--------INCTFNEPQLADAPQTVSWKLEGTDWTI 201 L + LG L + + + + + E Sbjct: 31 DAELLLAQALGCKRIELYTRFDEVVAEEPRGKFRQLVKQRAAGMPVAYLLGRREFYSRDF 90 Query: 202 HNHANVFSRTGLDIGARFF-------MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAK 254 +V ++ + I D+G G+G I +TL P+ + Sbjct: 91 RVTPDVLIPR---PETEHLVIAALDRLRETAKTETARICDVGAGSGCIAITLAKDLPKLQ 147 Query: 255 VVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR-FNAVLCNPPFHQ--- 310 V +D S A+ ++ N E + ++ +F+ ++ L+ + F+ ++ NPP+ Sbjct: 148 VTAIDISAAALQVAQQNAEEHGV--AEQIKFVKSDLLTALPENAVFDLIVSNPPYIGLVE 205 Query: 311 ------------------QHALTDNVAWEMFHHARRCLKINGELYI 338 + E+ A LK G L I Sbjct: 206 KPSLPKDVLQYEPHVALFSGEDGLDAIRELVRQAPSHLKPGGWLLI 251 >UniRef50_B8FEA1 Modification methylase, HemK family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FEA1_DESAA Length = 289 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 68/223 (30%), Gaps = 38/223 (17%) Query: 174 INCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEG--- 230 + + + + + +V ++ E L Sbjct: 62 FRELVKRRAAREPVAYIVGNRDFWTLELDVNPSVLIPR---PETETLVETALEVLNAAQA 118 Query: 231 --EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN 288 ++DLG G+G I L L + P+ + VD SP A+ +++ N + + +F Sbjct: 119 PMRVLDLGTGSGAIILALASEKPEHHYMAVDYSPQALETAKANAQKHNL----NVDFYKG 174 Query: 289 NALSGVEP-FRFNAVLCNPPFHQQHALTDNVAWE---------------------MFHHA 326 + V RF+ V+ NPP+ + + + A Sbjct: 175 SWFEAVRCLDRFDLVVSNPPYIPSRDIPGLMPEVARYEPMSALDGGPQGMDHLALIIERA 234 Query: 327 RRCLKINGELYIVA---NRHLDYFHKLK-KIFGNCTTIATNNK 365 LK G L + + L L+ + + N + Sbjct: 235 PEHLKPGGWLMLEMGFDQKELVEQVALETQAYENVRFVRDLAG 277 >UniRef50_Q5ZT28 Protein methyltransferase HemK n=6 Tax=Legionella RepID=Q5ZT28_LEGPH Length = 287 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 63/182 (34%), Gaps = 24/182 (13%) Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTG-LDIGARFFMQHLPENLEGEIVDLG 236 + ++ + E ++ NV + ++ +P+ ++DLG Sbjct: 61 IKQRAEGLPIAYITGQREFWSLSLKVTPNVLIPRHETERLVELALELIPDKENVSVLDLG 120 Query: 237 CGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 296 G+G I L L + P + D S A+ +R N +T + F + + + Sbjct: 121 TGSGAIALALAKERPLWHIDACDFSKEALELARYNAKTLGL---NNINFCHSYWFNNLPL 177 Query: 297 FRFNAVLCNPPFHQQHA--------------------LTDNVAWEMFHHARRCLKINGEL 336 +++A++ NPP+ ++ + H+ L +G L Sbjct: 178 KQYHAIVSNPPYIAENDPHLKHGDVRFEPTSALVSSQDGLADLQYIIQHSYEYLLPDGLL 237 Query: 337 YI 338 + Sbjct: 238 LV 239 >UniRef50_D2EKA3 Putative uncharacterized protein n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EKA3_PEDAC Length = 285 Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 73/224 (32%), Gaps = 41/224 (18%) Query: 174 INCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL-----PENL 228 + Q ++ K + + V + ++H+ N Sbjct: 58 FQKDVQRAVNGEPVQYITNKANFYGREFYVDSRVLIPR---VETEELVEHILNAHPQLNQ 114 Query: 229 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN 288 ++D+G G+G I +TL + P +V VD + A+A ++ N + +F Sbjct: 115 SLRVLDIGTGSGNIAITLKLERPDWQVTAVDIASEALAVAQQNAH----QQEAVVDFRQG 170 Query: 289 NALSGVEPFRFNAVLCNPPFHQQHA--------LTDNVAWEMF-------------HHAR 327 + V+ RF+ ++ NPP+ ++ + +F Sbjct: 171 SLFDAVKGERFDIIVSNPPYIAENERDVMDQSVIEYEPDKALFAPDDGLFWYKQIGRQLA 230 Query: 328 RCLKINGELYIVANRHLDYFHKLKKIF------GNCTTIATNNK 365 L G+L+ H KLK+ F + + + Sbjct: 231 NHLTNAGQLWCEFGYHQGA--KLKQYFSELPGVKDVDVLQDLSG 272 >UniRef50_A6C399 HemK protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C399_9PLAN Length = 309 Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 68/223 (30%), Gaps = 35/223 (15%) Query: 173 LINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARF--FMQHLPENLEG 230 L+ ++ + E + NV D + + Sbjct: 78 LMRQLVQRRANSEPVAYLVGNREFFGLDFYVDKNVLVP-RPDTETLVIELVDEAQKLTNP 136 Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 I+DL G+G I ++ AK D S A+A ++ N +N ++ +F++++ Sbjct: 137 FILDLCTGSGCIAISAAANCHNAKFQATDISEPALAIAQKNAASNELS--NQIQFLLSDC 194 Query: 291 LSGVEPFR-FNAVLCNPPFHQ---------------------QHALTDNVAWEMFHHARR 328 + P F+ ++ NPP+ + ++ A R Sbjct: 195 FEQIPPGTLFDIIVSNPPYIPDAEIEQLEKDVRQHEPRLALSGGKDGLDFYRKIIQEAGR 254 Query: 329 CLKINGELYIVANRHLDYFHKLKKIFG------NCTTIATNNK 365 LK G L + + L +F N A Sbjct: 255 YLKDQGLLMLEFSPEQ--EADLLALFKATGEYTNVRVKADLAG 295 >UniRef50_B0K1F6 Modification methylase, HemK family n=10 Tax=Thermoanaerobacterales RepID=B0K1F6_THEPX Length = 279 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 72/223 (32%), Gaps = 37/223 (16%) Query: 174 INCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEG--E 231 N + Q + K NV ++ + + L+ Sbjct: 56 FLGLLNMRKSHIPYQYIVKKHYFMGLEFFVDENVLIPR---PETEILVEEVLKRLKKGNT 112 Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 ++D+G G+G I ++++ P V VD S A+ ++ N + + LD+ F+ ++ Sbjct: 113 LIDIGTGSGAIAVSVVKYFPDCFVYAVDISRKALEVAKYNAKKHNV--LDKIVFIESDVF 170 Query: 292 SGVEPF-RFNAVLCNPPFH--------------------QQHALTDNVAWEMFHHARRCL 330 S V +F+ ++ NPP+ ++ A L Sbjct: 171 SQVPKNIKFDFIVSNPPYIKRGELETLQEEVKKEPIIALDGGEDGLFFYKKIIEGAPFYL 230 Query: 331 KINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 G + Y K T + T F ++ +K Sbjct: 231 NPEGAICFEM----GYDQK-----EEVTDLLTKGGFKNIEVIK 264 >UniRef50_B9XCI6 Protein-(Glutamine-N5) methyltransferase, release factor-specific n=1 Tax=bacterium Ellin514 RepID=B9XCI6_9BACT Length = 289 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 86/260 (33%), Gaps = 44/260 (16%) Query: 152 LELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRT 211 ++ L L K+ + + Q + + V Sbjct: 38 MKRMALYLNFEKP-LGSKELDEVREMVRRRGGREPLQHILGSTCFCGLEFEVNPKVLIPR 96 Query: 212 GLDIGARFFMQ-------HLPENLEGEI-VDLGCGNGVIGLTLLDKNPQAKVVFVDESPM 263 + LP + + +D G G+G + +T+ K+P A++ +D SP Sbjct: 97 ---PETELLAELGWQFLNSLPSSPTPPVALDYGTGSGCLAVTVAAKSPTAQLHALDISPD 153 Query: 264 AVASSRLNVETNMPEALDRCEFMINNALSGVEPF-RFNAVLCNPPFHQ------------ 310 A+A+++ N T+ R +F + + + V P +FN ++ NPP+ Sbjct: 154 ALATAQKNAATHQM--GSRIQFHLGDGFAAVPPGLQFNLIISNPPYIASDEIATLQPEVR 211 Query: 311 ---------QHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGN----C 357 + + A L NG++ + ++K+F + Sbjct: 212 DHDPRLALDGGRDGLDFYRRLAKEAAPRLLPNGKIMLEFGEGQA--EAIQKLFEDEKWVV 269 Query: 358 TTIATN--NKFVVLKAVKLG 375 + + + +L A + G Sbjct: 270 EGVKADYSGRLRILIARQTG 289 >UniRef50_Q0FGB0 HemK n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FGB0_9RHOB Length = 277 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 77/222 (34%), Gaps = 37/222 (16%) Query: 174 INCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQH-LPENLEGEI 232 N+ + + NV ++H L + I Sbjct: 56 FKTLINKRLEFQPISQIIGERYFWKNKFIVSPNVLDPR---PDTETLIEHTLSQGKFYNI 112 Query: 233 VDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 292 +DLG G+G I L+LLD+ A V +D+S A+ ++ N N+ R F + N Sbjct: 113 LDLGTGSGCIILSLLDEYKDAIGVGIDKSEDALNVAKQNA--NLLSLSQRVSFNLGNWCE 170 Query: 293 GVEPFRFNAVLCNPPFHQQHAL---------------------TDNVAWEMFHHARRCLK 331 G++ +F+ ++ NPP+ ++ + + A+ L Sbjct: 171 GIK-EKFDLIISNPPYISENDMKILSKSVLNWEPRIALTPEGDGLGAYRHILDGAKNLLI 229 Query: 332 INGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 NG+L + Y T + N+ + +K VK Sbjct: 230 PNGKLILEI----GY-----DQGKKVTHLLKNHGYKDIKLVK 262 >UniRef50_A7ADH3 Putative uncharacterized protein n=3 Tax=Bacteroidales RepID=A7ADH3_9PORP Length = 291 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 86/251 (34%), Gaps = 41/251 (16%) Query: 157 KVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIG 216 L L + I+ + + Q + + +V Sbjct: 48 HFLFCKDKELPESEKSRIHDIVERLKQMEPIQYILGTADFYSLQFEVDPSVLIPR---PE 104 Query: 217 ARFFMQHL---PENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273 ++ + + + +I+D+G G+G I +TL +A V+ D S A+A++R N + Sbjct: 105 TEELVEQVILDNADQKIKILDIGTGSGCIAVTLRKHLKKASVIATDISAEALATARRNAK 164 Query: 274 TNMPEALDRCEFMINNALSGVEPF---RF--NAVLCNPPFH--------QQHALTDNV-- 318 N F+ + L + F + ++ NPP+ +++ L Sbjct: 165 RNNTT----VTFIQTDILDPEKAEMDIPFILDVIVSNPPYIKEEEKKDMERNVLDYEPHL 220 Query: 319 ------------AWEMFHHARRCLKINGELYIVANRHLD---YFHKLKKIFGNCTTIAT- 362 W + H ++ L+ NG LY N ++ + N I Sbjct: 221 ALFVPDNDPLLYYWHIAHFGKKKLRRNGHLYFEINAACGNMVVEMLEEEGYKNIELIQDL 280 Query: 363 NNKFVVLKAVK 373 + K ++KA K Sbjct: 281 SGKDRIIKARK 291 >UniRef50_C0EX94 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EX94_9FIRM Length = 297 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 66/237 (27%), Gaps = 53/237 (22%) Query: 174 INCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE-- 231 + + + Q + + E + + V ++ E++ Sbjct: 57 LESVLKQREQRVPLQYLMGECEFMGYDFYVDERVLIPRQ---DTECLVELAVEDIRNRKT 113 Query: 232 -------------------IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNV 272 ++DL G+G IG+++ P +V D S A++ ++ N Sbjct: 114 QNRCESNNTADQKNEQKVKVLDLCTGSGCIGISVAKLCPDTEVTLADISEGALSVAKKNA 173 Query: 273 ETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ---------------------Q 311 + + N +E RF+ +L NPP+ Sbjct: 174 QNLDAG----VTLIKGNLFENIE-GRFDYILSNPPYIPSEVIEGLMPEVKEHEPRLALDG 228 Query: 312 HALTDNVAWEMFHHARRCLKINGELYIVANRHLD---YFHKLKKIFGNCTTIATNNK 365 A + E+ + A L +G +Y ++ F Sbjct: 229 EADGLSFYREIINEAPDYLNPDGRIYFEIGAEQGEDLTHLMNERGFSEVKVHKDLAG 285 >UniRef50_A5EWT8 Modification methylase, HemK family n=2 Tax=Cardiobacteriaceae RepID=A5EWT8_DICNV Length = 276 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 64/184 (34%), Gaps = 22/184 (11%) Query: 174 INCTFNEPQLADAPQTVSWKLEGTDWTIHNHANV-FSRTGLDIGARFFMQHLPENLEGEI 232 +N + + + V R + + +P + Sbjct: 54 LNALLLRRARGEPFAYILGNQPFYHLDLKVSPAVLIPRPETEQLVDAALAKIPPQDCYRV 113 Query: 233 VDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 292 +DLG G+G I L + + P +V+ VD+S A+ ++ N F++++ L+ Sbjct: 114 IDLGTGSGAIALAIAAERPHCRVLAVDKSWDALRVAQENARHLQL---ANVHFVLSDWLT 170 Query: 293 GVEPFRFNAVLCNPPFHQQHAL------------------TDNVAWEMFHHARRCLKING 334 + R + ++ NPP+ H + HA RCL+ NG Sbjct: 171 AIADARADMIVSNPPYIDAHDEHLAALAYEPQMALVSPEHGYADLLHLIAHAGRCLRPNG 230 Query: 335 ELYI 338 L + Sbjct: 231 WLLL 234 >UniRef50_B4U316 Methylase of polypeptide chain release factors n=8 Tax=Streptococcus RepID=B4U316_STREM Length = 282 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 68/211 (32%), Gaps = 41/211 (19%) Query: 186 APQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL---PENLEGEIVDLGCGNGVI 242 +PQ ++ + D + + V ++ + + ++D+G G+G I Sbjct: 67 SPQYITGRAYFRDLVLAVDSRVLIPR---PETEELVELILKENDATRKSVLDIGTGSGAI 123 Query: 243 GLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAV 302 + L P +V D S A++ + N + E F ++ S + +F+ + Sbjct: 124 AIALKKARPNWQVTASDISADALSLAYSNALDHHVE----IAFEESDLFSKLS-GQFDII 178 Query: 303 LCNPPFHQ---------------------QHALTDNVAWEMFHHARRCLKINGELYIVA- 340 + NPP+ + + A L +G+LY Sbjct: 179 VSNPPYIAYEDKDEVGLNVYQSEPHLALFAAENGFAIYRRIIEQASAYLTTSGKLYFEIG 238 Query: 341 -NRHLDYFHKLKKIFGNCTTIATNNKFVVLK 370 + L K F + VLK Sbjct: 239 YKQGEGLKRLLSKRFPQ-------KRIRVLK 262 >UniRef50_C5EF50 Modification methylase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EF50_9FIRM Length = 328 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 31/233 (13%), Positives = 74/233 (31%), Gaps = 36/233 (15%) Query: 170 KARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLE 229 K R + Q ++ E + + + +V ++ + + + Sbjct: 91 KCRKYEEMIDRRAERIPLQHLTGVQEFMGFEFYVNEHVLIPRQ---DTETLVELVLKEQK 147 Query: 230 GE---IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFM 286 G+ ++D+ G+G I ++L V +D S A+A + N + + E + Sbjct: 148 GKDAALLDVCTGSGCIAISLALMGGYRDVTALDVSREALAVAARNAQRLLKEHEGEFNLI 207 Query: 287 INNALSGV-EPFRFNAVLCNPPFHQ---------------------QHALTDNVAWEMFH 324 ++ + R++ ++ NPP+ A + Sbjct: 208 ESDMFERLEPDRRYDIIVSNPPYIPSHDIEGLEPEVRDYEPRMALDGTADGLAFYRILAE 267 Query: 325 HARRCLKINGELYIVANRHLDYFHKLKKIFG-----NCTTIATNNKF-VVLKA 371 R+ L G +Y+ D + ++F + V++A Sbjct: 268 GCRKHLCPGGCVYMEI--GFDQGQAVSRMFEMQGYVQVEVMKDMAGLDRVVRA 318 >UniRef50_A9NEL6 Ribosomal RNA small subunit methyltransferase C n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEL6_ACHLI Length = 197 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 75/211 (35%), Gaps = 33/211 (15%) Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGC 237 N+P L T ++ +T + VFS+ LD G+ + +L + + Sbjct: 6 RNDPNLISEETTYQVEMFDQKFTFLSDKGVFSKDHLDTGSYALIANLDIPTHAKSL---- 61 Query: 238 GNGVIGL-----------TLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFM 286 L L +P V +D + A+ N++ N ++ Sbjct: 62 ------LDVGSGIGVIGIILKKVHPNLDVTQIDINTRALEL---NIKNNKLNQVE-TTVY 111 Query: 287 INNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY 346 +N S V F+ ++ NPP A + ++ A + L G+L+IV + Sbjct: 112 ESNLFSHV-DKTFDCIVSNPPIRTGKAT----IYNLYKDAYKHLNTYGQLWIVVRKDQGA 166 Query: 347 FHK---LKKIFGNCTTIATNNKFVVLKAVKL 374 L I+ + + F V++A K Sbjct: 167 KSTIDYLSTIYEEVELVKRHKGFYVIRAQKR 197 >UniRef50_A3EUN2 Modification methylase (HemK) n=2 Tax=Leptospirillum sp. Group II RepID=A3EUN2_9BACT Length = 293 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 67/174 (38%), Gaps = 5/174 (2%) Query: 173 LINCTFNEPQLADAPQTVSWKLEGTDWTIHNHAN-VFSRTGLDIGARFFMQHLPENLEGE 231 + + ++ + + + R + ++ L Sbjct: 66 CYASWVERRRQREPFHLITGSVPFLEERFAVAPGTLIPRPETESLVENVLRILDSRSPER 125 Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 I+DLGCG+G++G++LL K P+A + VD S + + SR N L R F+ + Sbjct: 126 ILDLGCGSGILGISLLKKFPKAHCLAVDRSVVPLEVSRKNA--LALGVLSRIHFVQGDWT 183 Query: 292 SGVE-PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL 344 + F+ ++ NPP+ L+ +F+ R L G +V R L Sbjct: 184 EMLRLDQGFDLIVSNPPYIASGDLSGLDPEILFYEPREAL-DGGPDGLVFYRRL 236 >UniRef50_D1R4W7 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4W7_9CHLA Length = 285 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 79/198 (39%), Gaps = 29/198 (14%) Query: 186 APQTVSWKLEGTDWTIHNHANV-FSRTGLDIGARFFMQHLPE-NLEGEIV-DLGCGNGVI 242 Q ++ ++E D + + V R +I A Q+L + +L G+++ D+ CG+G + Sbjct: 70 PLQYITGQVEFYDCSFKVNPAVLIPRNETEILADLIAQNLRQQDLSGKVLWDVCCGSGCL 129 Query: 243 GLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAV 302 G++L K PQ +V+ D S A+ ++ N N + EF+ + L + + + + Sbjct: 130 GISLKKKFPQLRVILADISDKALQVAKENSFLNRVD----VEFVQGDFLQPFKGTQTDFL 185 Query: 303 LCNPPFHQ--------------------QHALTDNVAWEMFHHARRCLKINGELYIVA-- 340 +CNPP+ A + LK G++++ Sbjct: 186 VCNPPYIPESDWESLEDEVKYEPKEALLGGADGLQFYKRLMTELPFFLKPLGKVWLEIGF 245 Query: 341 NRHLDYFHKLKKIFGNCT 358 N+ ++ C Sbjct: 246 NQGTAVQTLFEQNSRGCR 263 >UniRef50_Q9CNN7 Uncharacterized adenine-specific methylase PM0390 n=258 Tax=Proteobacteria RepID=Y390_PASMU Length = 338 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 69/198 (34%), Gaps = 30/198 (15%) Query: 170 KARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARF----FMQHLP 225 K L+ + ++ + + V + F LP Sbjct: 105 KEVLLRLIIQRLEKRIPVAYLTHQAWFCGLNFYVDERVIVPRS--PISALIQEGFAPLLP 162 Query: 226 ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEF 285 + + I+D+ G+G I + ++ P+A+V VD S A+ +++N+E + LDR Sbjct: 163 QEPK-RILDMCTGSGCIAIACAERFPEAEVDAVDLSSDALDVAQINIERHNM--LDRVYP 219 Query: 286 MINNALSGVEPFRFNAVLCNPPFHQ--------------------QHALTDNVAWEMFHH 325 + ++ + +++ ++ NPP+ + ++ + Sbjct: 220 IQSDLFHDLAKDQYDLIVANPPYVDLEDLSDMPAEFHHEPEMALGSGVDGLEITKKILYA 279 Query: 326 ARRCLKINGELYI-VANR 342 A L G L V N Sbjct: 280 APDYLTEQGVLVCEVGNS 297 >UniRef50_Q031E0 Methylase of polypeptide chain release factor n=4 Tax=Lactococcus lactis RepID=Q031E0_LACLS Length = 271 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 66/206 (32%), Gaps = 34/206 (16%) Query: 173 LINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL---PENLE 229 L+ + PQ + E + V ++ + N Sbjct: 50 LLTELSERLIKNEPPQYIVGWAEFYELKFKVDERVLIPR---PETEELVEMILTENNNDS 106 Query: 230 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINN 289 +I+D+G G+G I ++L V D S A+ + N + N EF+ ++ Sbjct: 107 LKILDIGTGSGAIAISLAKARQNWSVKASDISQNALELAAENAKMNHV----NLEFIQSD 162 Query: 290 ALSGVEPFRFNAVLCNPPFHQQHAL---------------------TDNVAWEMFHHARR 328 + + RF+ ++ NPP+ + ++ A Sbjct: 163 VMDELTD-RFDIIVSNPPYIAFDETYEMDDSVIKYEPDLALFAQNQGLAIYQKIADQAVN 221 Query: 329 CLKINGELYIVANRHLDYFHKLKKIF 354 L +G++Y+ ++ IF Sbjct: 222 HLTDDGKIYLEIGYKQG--KAVQAIF 245 >UniRef50_Q7NJS7 Protoporphyrinogen oxidase n=1 Tax=Gloeobacter violaceus RepID=Q7NJS7_GLOVI Length = 286 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 79/253 (31%), Gaps = 40/253 (15%) Query: 146 DIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHA 205 + T L ++ GP +K + E + Q + D + + Sbjct: 31 EAVTGLDRLRVRLGGPQALEAHREKLAALWRRRIEEAM--PLQYLLGTAHWRDLQLQVNP 88 Query: 206 NVFSRTGLDIGARFFMQHLPEN----LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDES 261 V + + + +VDLG G+G I + + P A V VD S Sbjct: 89 AVLIPR---PESEALVDVAVDFCRSCAGARVVDLGTGSGAIAVAVARALPGATVWAVDAS 145 Query: 262 PMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------- 310 A+ + N+E ++ + N + F+AVL NPP+ Sbjct: 146 EAALVVAGANIERYGLS--EQVHLLRGNWFVPLPTQPFDAVLSNPPYIPSAEIAALMPEV 203 Query: 311 ----------QHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTI 360 + + ++ A R L+ G L + + Sbjct: 204 RLHEPLSALDGGSDGLDAVRQIIADAARHLRPGGILALEVMAGQGPTV--------VQLL 255 Query: 361 ATNNKFVVLKAVK 373 A ++++ ++ V+ Sbjct: 256 ARDSRYGCIRTVR 268 >UniRef50_Q7VR73 Methylase of polypeptide chain release factors n=2 Tax=Candidatus Blochmannia RepID=Q7VR73_BLOFL Length = 281 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 97/278 (34%), Gaps = 42/278 (15%) Query: 118 LALLEQQLRALRKVVTS--DTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLIN 175 L+ L+ ++ D+ II + + E++L TTL ++ + + Sbjct: 5 KKWLDWAFLQLKNSLSPRRDSEIILEIVTK-------KSREQLLTFEETTLTPEQIKKLQ 57 Query: 176 CTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQ----HLPENLEGE 231 + + ++ + E + VF D ++ +P+ + Sbjct: 58 SLIDRRKKSEPIAYLVGSKEFWSLSFKISPGVFIP-RTD--TECLIEEVLNLIPDCNHLK 114 Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 ++DLG G G I L L + P + +D+ AV + N ++ EF +N Sbjct: 115 VLDLGSGVGSIALALASERPTWNITGIDQQQQAVILAIKNQKSYKF---RNVEFKQSNWF 171 Query: 292 SGVEPFRFNAVLCNPPFHQQHAL--------------------TDNVAWEMFHHARRCLK 331 + ++ +F+ ++ NPP+ +H L + + L Sbjct: 172 TKIKKNKFHLIVSNPPYINEHDLHFLSQDIHFEPKSALVSPYYGLKDLIIICKQSINHLY 231 Query: 332 INGELYIVA--NRHLDYFHKLKKI-FGNCTTIATNNKF 366 G L + N+ L I F N TI +++ Sbjct: 232 PMGWLCLEHGWNQGKYIRTLLHAIGFNNIHTILDYHQY 269 >UniRef50_Q04KR3 HemK protein n=48 Tax=Streptococcus RepID=Q04KR3_STRP2 Length = 279 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 30/232 (12%), Positives = 69/232 (29%), Gaps = 46/232 (19%) Query: 172 RLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL---PENL 228 + + + + Q + + + + V ++ + Sbjct: 54 QFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPR---PETEELVELILTENLET 110 Query: 229 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN 288 ++D+G G+G I L L P V D S A+ +R N + + + Sbjct: 111 NLSVLDIGTGSGAIALALAKNRPDWSVTAADISQEALDLARENAKNQNLQ----IFLKKS 166 Query: 289 NALSGVEPFRFNAVLCNPPFHQ---------------------QHALTDNVAWEMFHHAR 327 + + + +++ ++ NPP+ + + A Sbjct: 167 DCFTEIS-EKYDIIVSNPPYISREDESEVGLNVLYSEPHLALFADEDGLAIYRRIAEDAT 225 Query: 328 RCLKINGELYIVA------------NRHLDYF--HKLKKIFGNCTTIATNNK 365 LK +G++Y+ +HL LK FG + ++ Sbjct: 226 DYLKDSGKIYLEIGYKQGQCVPELFRKHLPEKRVRTLKDQFGQNRMVVVDDG 277 >UniRef50_A1WVR3 Modification methylase, HemK family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WVR3_HALHL Length = 281 Score = 133 bits (336), Expect = 9e-30, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 82/280 (29%), Gaps = 47/280 (16%) Query: 117 TLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINC 176 L + LRA D ++ + + S L F + P T A++ Sbjct: 11 ALHEGTEALRAASATARLDAELLLA-EVLGVGRSHLFAFPERPIPAATIEAYR------A 63 Query: 177 TFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPE--NLEGEIVD 234 + + + + E D T+ V ++ G++++ Sbjct: 64 LIARRRTGEPVAYLMRRCEFRDLTLSVTPAVLVPR---PETEHLVEQAVACLPAGGQVLE 120 Query: 235 LGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV 294 LG G+G I L + + P A++ + S A+A ++ N + G+ Sbjct: 121 LGTGSGAIALAVAHERPDARITATERSTAALAVAQENRHRLGLSE---VHLTPGDWNEGI 177 Query: 295 EPFRFNAVLCNPPFH--------------------QQHALTDNVAWEMFHHARRCLKING 334 P F+ ++ NPP+ + A L G Sbjct: 178 PPGPFDVIVSNPPYVQTTAAEWGNGALEHEPREALAAGHDGLADIRSLVPPATAELARGG 237 Query: 335 ELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKL 374 L + + G + L+AV+ Sbjct: 238 WLILEHG---------ARQGGAVRELLQAAG---LEAVRT 265 >UniRef50_A9N9K3 Protein methyltransferase HemK n=6 Tax=Coxiella burnetii RepID=A9N9K3_COXBR Length = 277 Score = 133 bits (336), Expect = 9e-30, Method: Composition-based stats. Identities = 29/207 (14%), Positives = 70/207 (33%), Gaps = 22/207 (10%) Query: 151 TLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANV-FS 209 + + L + + ++ + + + E + +V Sbjct: 34 LKKSRADLFAYPEIQLNSSQQKTLSAYVKRRLKGEPIAYILGQKEFWSLNLKVTPDVLIP 93 Query: 210 RTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSR 269 R ++ + +++LP++ + I DLG G+G + L + + P + D S A+ + Sbjct: 94 RPETEMLVEWILKNLPKDEKLRIADLGTGSGAVALAIAVERPHWTIDATDNSQAALKIAE 153 Query: 270 LNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHA---------------- 313 +N + + + C F + ++A++ NPP+ Sbjct: 154 INAKQHEIK---NCNFYHGEWCQALPRRDYHAIVGNPPYIPDKDQHLQQLKHEPREALAA 210 Query: 314 --LTDNVAWEMFHHARRCLKINGELYI 338 + + H A+ L G L + Sbjct: 211 GSDGLSAIKIIIHEAKSYLVNGGWLLL 237 >UniRef50_Q2RFW1 Modification methylase, HemK family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RFW1_MOOTA Length = 283 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 75/262 (28%), Gaps = 32/262 (12%) Query: 127 ALRKVVTSDTRIIAGAKARDIHTSTLELF--------EKVLGPTTTTLAWKKARLINCTF 178 LR+ + R +A L ++L LA A Sbjct: 2 TLRQALGEAVRRLAAGGVERPRLEAEVLLGWACSLTRPRLLARLEEELAPAAAGRFWQAI 61 Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANV-FSRTGLDIGARFFMQHLPENLEGEIVDLGC 237 + Q ++ E V R ++ ++ L I D G Sbjct: 62 DRRAAGYPLQYLTGHQEFMSLDFKVTPAVLIPRQDTEVVVEAVLERLDPCESYTIADCGT 121 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G+G I L+L P+A+V D SP A+ ++ N R + + L+ + Sbjct: 122 GSGAIALSLAHYLPRARVYATDISPAALTVAQENARKLGL--AARVTLLQGDFLAPLRGL 179 Query: 298 RFNAVLCNPPFHQ--------------------QHALTDNVAWEMFHHARRCLKINGELY 337 + +A++ NPP+ + + A L+ G L Sbjct: 180 KLDALVANPPYIPTAALPGLPADVRSEPRLALDGGPDGLDAYRFLLPGAAGLLRPGGLLA 239 Query: 338 IVANRHLD-YFHKLKKIFGNCT 358 + L + G Sbjct: 240 LEIGSDQGQAVKDLARAVGAYR 261 >UniRef50_C5B815 Protein-(Glutamine-N5) methyltransferase, release factor-specific n=11 Tax=Gammaproteobacteria RepID=C5B815_EDWI9 Length = 279 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 71/270 (26%), Gaps = 47/270 (17%) Query: 122 EQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTT--------TTLAWKKARL 173 +Q LR +T L E V G T L + Sbjct: 4 DQWLRQACARLTPG---------DSPRRDAEILLEHVTGRGRSFLLAFGETLLTAAQLAQ 54 Query: 174 INCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE-- 231 + + + + E + ++ L Sbjct: 55 LTSLLARRVQGEPVAYLIGEREFWSLPLAVSPATLIPR---PDTECLVEQALLRLPATPV 111 Query: 232 -IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 IVDLG G G I L L + P +V V+ +P AVA ++ N R E + + Sbjct: 112 QIVDLGTGTGAIALALASERPDCQVSAVEFNPDAVALAQHNAARLGLS---RVEILQGSW 168 Query: 291 LSGVEPFRFNAVLCNPPFHQ--------------------QHALTDNVAWEMFHHARRCL 330 + + RF ++ NPP+ + A L Sbjct: 169 FTPLAGRRFTLIVSNPPYIDAADGHLSQGDVRFEPASALVAAEQGLADLRAIARQAPDYL 228 Query: 331 KINGELYIVANRHLDYF-HKLKKIFGNCTT 359 + G L + L +G C Sbjct: 229 ALGGWLLLEHGWQQGAAVRALLTEYGFCRV 258 >UniRef50_A4XJN0 Modification methylase, HemK family n=2 Tax=Clostridia RepID=A4XJN0_CALS8 Length = 289 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 92/274 (33%), Gaps = 40/274 (14%) Query: 121 LEQQLRALRKVVTSDTR------IIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLI 174 LE+ + L+ + I+ ++ +I S + EK L I Sbjct: 13 LEEVINILKDYCAENGEDYKRIAILLVSQILNIDKS-QAILEKNLTIEEEDYQR-----I 66 Query: 175 NCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGA--RFFMQHLPENLEGEI 232 + + Q + K + +V D ++ Sbjct: 67 ISAAKKYTMDFPLQYCTNKAYFMGLEFYVDEDVLIP-RFDTETLIEVAIELFNRKENLNF 125 Query: 233 VDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 292 +D+G G+G I + L KV+ VD S A+ + N + N D+ F+ +N Sbjct: 126 LDVGTGSGCIAIALCKFL-DCKVIAVDISENALRVAEKNAKLNGV--FDKIHFVKSNLFE 182 Query: 293 GVEPF-RFNAVLCNPPFHQQHAL--------------------TDNVAWEMFHHARRCLK 331 + P +F+A+ NPP+ ++ + E+ +AR+ LK Sbjct: 183 NIPPSLKFDAIFSNPPYISENEISMLDKRVLKEPKQALFSKENGLYYFQEIAKNARQYLK 242 Query: 332 INGELYI-VANRHLDYFHKLKKIFGNCTTIATNN 364 G + V R + K+ K G + N+ Sbjct: 243 KGGYIIFEVGYRQSQHVKKILKDLGYVDIKSKND 276 >UniRef50_C0WSS5 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase n=3 Tax=Lactobacillus RepID=C0WSS5_LACBU Length = 288 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 84/236 (35%), Gaps = 45/236 (19%) Query: 154 LFEKVLGPTTTT-LAWKKARLINCT-------FNEPQLADAPQTVSWKLEGTDWTIHNHA 205 L +K G +TT L ++++ + Q + + T++ + Sbjct: 34 LIQKRFGFSTTDMLIHYHDKMLSGQWLQFQNDVKRLISGEPVQYIVGQANFYGLTLNVDS 93 Query: 206 NVFSRTGLDIGARFFMQHLPE------NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVD 259 NV + + + + N +++D+G G+G I + L P+ +V D Sbjct: 94 NVLIPR---VETEELVDWILDQTTVYTNRPLKVLDIGTGSGAIAIALKANRPEWQVNASD 150 Query: 260 ESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTD--- 316 S A+ ++ N + + F++++ + + F+ ++ NPP+ + D Sbjct: 151 ISESALKVAQQNAQLHHVA----INFILSDMFAHI-NEAFDLIVSNPPYISASEVGDMDS 205 Query: 317 ------------------NVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIF 354 + + L + G+L++ H ++KIF Sbjct: 206 SVKNNEPRIALFAADDGLAIYKSLAKGVDAHLNVGGQLFVEIGFHQ--ETSVRKIF 259 >UniRef50_D1PU17 Protein-(Glutamine-N5) methyltransferase n=8 Tax=Prevotella RepID=D1PU17_9BACT Length = 301 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 94/267 (35%), Gaps = 51/267 (19%) Query: 127 ALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEP----- 181 L + +T I +A+ + L ++ G T T + KA + + E Sbjct: 22 RLWRSLTP---IYGDGEAKAVVRL---LLDEGFGLTLTDIMSGKADELPTSDKERLSVMA 75 Query: 182 ---QLADAPQTVSWKLEGTDWTIHNHANV-FSRTGLDIGARFFMQ-------HLPENLEG 230 Q + Q V + + T H V R + + + L + Sbjct: 76 DRLQKGEPVQYVLGRSDFCGRTFHVEPGVLIPRPETEELCQMIVSEYTKPYCALQPPVPL 135 Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 +++D+G G+G I +TL A++ D S A+ +R N + + Sbjct: 136 QVLDVGTGSGCIAVTLALGLHNAEITAWDVSSEALIIARDNAHRLGAK----VNLEWQDM 191 Query: 291 LSGVEPFR-FNAVLCNPPFHQQHA------------------LTDNVAWEMFHH----AR 327 L E R ++ ++ NPP+ H + D+ + AR Sbjct: 192 LCPPEDDRQWDIMVSNPPYIANHERKAMSRNVLDYEPEQALFVPDDDPLRFYRAIATYAR 251 Query: 328 RCLKINGELYIVANRHLDYFHKLKKIF 354 R LK G+++ N Y +L+++F Sbjct: 252 RTLKKGGKVFFEINPL--YAEELQEMF 276 >UniRef50_Q0AC10 Modification methylase, HemK family n=8 Tax=Proteobacteria RepID=Q0AC10_ALHEH Length = 295 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 64/216 (29%), Gaps = 26/216 (12%) Query: 174 INCTFNEPQLADAPQTVSWKLEGTDWTIHNHA-NVFSRTGLDIGARFFMQHLPENLEGEI 232 + ++ + + A + R ++ + + + + + Sbjct: 72 FRQLLARRLAGEPVAHLTGRRGFWSLELKVTAETLIPRPETELLVEAALARVDGDRQLRV 131 Query: 233 VDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 292 DLG G G I L L D+ P +V V+ S A+ +R N DR + + + Sbjct: 132 ADLGTGTGAIALALADECPAWRVTAVEASAGALVVARENARRLGL--ADRVQVVAGSWFG 189 Query: 293 GVEPFRFNAVLCNPPFH--------------------QQHALTDNVAWEMFHHARRCLKI 332 + RF+ V+ NPP+ + A L Sbjct: 190 PLAGERFDLVVSNPPYVGVHEPELYEGDVRFEPRSALAAGRDGLGDLRRIVGEAPGHLVA 249 Query: 333 NGELYIVANRHLDYFHK---LKKIFGNCTTIATNNK 365 G L + + L+ FG T+ Sbjct: 250 GGWLMVEHGFQQGEAVRRLFLEAGFGGVETLRDLAG 285 >UniRef50_A5N3J8 Predicted methyltransferase n=13 Tax=Clostridium RepID=A5N3J8_CLOK5 Length = 288 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 67/221 (30%), Gaps = 31/221 (14%) Query: 181 PQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARF--FMQHLPENLEGEIVDLGCG 238 + + + + E V D ++ + N I DL CG Sbjct: 68 REEKMPVKYILGQCEFMGMDFIVKPGVLIP-RPDTETLVENALEEIDNNEFYNICDLCCG 126 Query: 239 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG--VEP 296 G IG++L VV D S A + NV R + ++ + + Sbjct: 127 TGAIGISLAKFVEHINVVCCDISDTACEVAEQNVRRY-YSLNKRISIVKSDLMEYFILNK 185 Query: 297 FRFNAVLCNPPFH---------------------QQHALTDNVAWEMFHHARRCLKINGE 335 +FN ++CNPP+ ++ + + L NG Sbjct: 186 IKFNMIVCNPPYIKESVIDTLMEDVKNYEPHEALSGGEDGLEFYRKIVKQSLKVLTKNGM 245 Query: 336 LYIVA---NRHLDYFHKLKKIFGNCTTIAT-NNKFVVLKAV 372 L + +K F N T I K V+KAV Sbjct: 246 LMFEIGYDQKKDVTSILMKYGFKNTTCIKDLAGKDRVIKAV 286 >UniRef50_A6G5N4 Probable ribosomal RNA small subunit methyltransferase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G5N4_9DELT Length = 364 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 60/372 (16%), Positives = 105/372 (28%), Gaps = 44/372 (11%) Query: 29 EAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNG 88 + L + + G VL+++ G L+ L E I D A + Sbjct: 7 DPGVRLLGRSVARAHAPGEVLLVH--CGELA-ELGEGATRLILDVREHTHA------RSR 57 Query: 89 IDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIH 148 LD+ V + E L + R+ + Sbjct: 58 CVADVGPHLDAELGGSFAAAAVWPRAHLGKDFSEACLARGALSLREGGRLYCAVRKAKGG 117 Query: 149 TSTLELFEKVLGPTTTTLAWKKARLINCTFN---EPQLADAPQTVSWKLEGTDWT---IH 202 S + + +LG + L + LA S+ ++ + Sbjct: 118 KSLGKTMKALLGSAQVEDRDRGYHLWVGERGPDFDEALARELVGRSYLVDDPLLPEGGLR 177 Query: 203 NHANVFSRTGLDIGARFFMQHLP----------ENLEGEIVDLGCGNGVIGLTLLDKNPQ 252 + VFSR LD G R ++ ++DL G G + L + P Sbjct: 178 SLPGVFSRRELDAGTRGLLEVAAVIAEQERAQGLAPPRRVLDLCAGIGPLALWAAHRWPA 237 Query: 253 AKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR------------FN 300 A+V+ V+ S + A+ R + + + P + Sbjct: 238 AEVLAVE-SNLRAAALLEANAAAEGPGEPRVRVLAADGMPARRPASAVPELARPFVGAVD 296 Query: 301 AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTI 360 L NPP H + R L G +V NR L+ G Sbjct: 297 WALINPPTHADPETLARLL-----DLRGWLSPKGSALLVVNRPGRAVECLQAA-GATIEG 350 Query: 361 ATNNKFVVLKAV 372 + + +L+A Sbjct: 351 GERDGYTILRAR 362 >UniRef50_B5EL90 Protein-(Glutamine-N5) methyltransferase, ribosomal protein L3-specific n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EL90_ACIF5 Length = 303 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 66/201 (32%), Gaps = 24/201 (11%) Query: 162 TTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGL--DIGARF 219 L +K + + L ++ + V L Sbjct: 66 AARLLDREKTTIFKHFYQREILRRPAAYITGEAWFAGLRFSVDERVLIPRSLLEPFIEEG 125 Query: 220 FMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEA 279 F + + I+++G G+G + +TL + P+A+V VD S A++ + N+ E Sbjct: 126 FAPWVEASQVRRILEIGTGSGCMAITLALRFPEAEVDAVDISADALSVAHANIRRYGLE- 184 Query: 280 LDRCEFMINNALSGVEPFRFNAVLCNPPFH--------------------QQHALTDNVA 319 DR ++ + +E R++ +L NPP+ + Sbjct: 185 -DRVHLHQSDLFAALEGRRYDLILSNPPYVDAIAMAELTPEYRHEPRLALAAGEDGLDCL 243 Query: 320 WEMFHHARRCLKINGELYIVA 340 + A L+ G L + Sbjct: 244 LPLLEQAPHHLEGGGVLVVET 264 >UniRef50_C9BMW7 Modification methylase HemK n=39 Tax=Lactobacillales RepID=C9BMW7_ENTFC Length = 290 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 78/219 (35%), Gaps = 29/219 (13%) Query: 172 RLINCTFNEPQLADAPQTVSWKLEGTDWTI-HNHANVFSRTGLDIGARFFMQHLPENLEG 230 RLI PQ + + D + A + R + + + P + Sbjct: 67 RLIETDLRLLLADHPPQYLLGYADFYDHRLKVTEATLIPRPETEELVEWCLDETP-GVPL 125 Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 E++D+G G G I ++L + VD S A+ ++ N + + F + Sbjct: 126 EVIDIGTGTGAIAISLKAARKNWHISAVDLSEEALEVAKENAQKEG----TKISFYHGDT 181 Query: 291 LSGVEPFRFNAVLCNPPFHQQHA---------------------LTDNVAWEMFHHARRC 329 L V +F+ ++ NPP+ ++ + ++ A Sbjct: 182 LGPVMDQQFDVIISNPPYISRNEWELMDESVRSFEPKMALFAENDGLAIYEKIAVEAPSV 241 Query: 330 LKINGELYI-VANRHLDYFHKL-KKIFGNCTTIATNNKF 366 LK NG++++ + R + K+ ++ F + + F Sbjct: 242 LKSNGKIFLEIGFRQGEAVKKIFQQAFPDKKVAIKKDLF 280 >UniRef50_A1ZCC3 Protoporphyrinogen oxidase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZCC3_9SPHI Length = 288 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 73/230 (31%), Gaps = 32/230 (13%) Query: 172 RLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPEN---L 228 ++++ Q + Q ++ + E V + + ++ Sbjct: 58 QVLDNALRRLQQYEPIQYITKQAEFYGLPFRVKPGVLIPR---PETEELVAWIIQDFQSQ 114 Query: 229 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN 288 ++D+G G+G I +TL PQA+V +D S A+ ++ N N ++ Sbjct: 115 PLTLLDIGTGSGCIAVTLAKNMPQAQVNALDVSNEALTIAQQNAALNKVNIQWIAHNILA 174 Query: 289 NALSGVEPFRFNAVLCNPPFHQQHALT----------------------DNVAWEMFHHA 326 + + + ++ NPP+ + A Sbjct: 175 PSFTHFADQSLDVIVSNPPYVTPAEQAQMHENVLKHEPALALFVPQNEPLLFYEAITQVA 234 Query: 327 RRCLKINGELYIVANRHLDYFHKL---KKIFGNCTTIATN-NKFVVLKAV 372 R+ LK G LY N K ++ F K ++KAV Sbjct: 235 RQKLKPQGALYFEINEQFGAITKKMIEQQGFQEVEVRKDLFGKDRMVKAV 284 >UniRef50_Q97F67 S-adenosylmethionine-dependent methyltransferase, HEMK ortholog n=1 Tax=Clostridium acetobutylicum RepID=Q97F67_CLOAB Length = 285 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 76/224 (33%), Gaps = 35/224 (15%) Query: 174 INCTFNEPQLADAPQTVSWKLEGTDWTIHNHANV-FSRTGLDIGARFFMQHLPENLEGEI 232 N + + ++ K E H V R +I ++++ N ++ Sbjct: 57 YFDYINMRKKKMPIRYITEKCEFMGLDFHVEKGVLIPRPDTEILVEAVLEYIELNNYKKV 116 Query: 233 VDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 292 D+ G+G IGL++ +V+ D SP A+ S++N DR + + L Sbjct: 117 CDVCTGSGAIGLSIAKYAKDVEVLCSDISPDAIRVSKIN--RQGLNLEDRVKIENGDLLE 174 Query: 293 -GVE-PFRFNAVLCNPPFH---------------------QQHALTDNVAWEMFHHARRC 329 +E +F+ V+ NPP+ + + +++ Sbjct: 175 KPIERGEKFDIVVSNPPYIREDEIPKLMDDVKDYEPIIALVGGEDGLDFYRRITSMSKKV 234 Query: 330 LKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 LK G ++A + I N FV ++ K Sbjct: 235 LKPGG---LIAYEIGSDEA------NEVSNILENEGFVSIETRK 269 >UniRef50_B0P066 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0P066_9CLOT Length = 283 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 28/219 (12%), Positives = 58/219 (26%), Gaps = 33/219 (15%) Query: 174 INCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGA---RFFMQHLPENLEG 230 + + Q + E +T +V D ++ Sbjct: 58 YKELIQKRKEHVPLQYILGTQEFMGYTFKVTPDVLIP-RADTETVLEEVLLKVPQTLKNL 116 Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 +I+DL G+G I ++L V D S A+ ++ N +F+ ++ Sbjct: 117 KILDLCTGSGCIAISLALILKPEVCVGTDISEKALKIAKAN----GENLAPMVKFIQSDL 172 Query: 291 LSGVEPFRFNAVLCNPPFH---------------------QQHALTDNVAWEMFHHARRC 329 V ++ ++ NPP+ ++ A+ Sbjct: 173 FENVT-GSYDLIISNPPYITTEECGKLMPEVKDYEPMLALDGKEDGLYFYKKIIKEAKNY 231 Query: 330 LKINGELYI-VANRHLDYFHKL--KKIFGNCTTIATNNK 365 L G L + + L + F Sbjct: 232 LNPQGMLAFEIGYDQGEAVKNLMEAQDFACVEIKKDLAG 270 >UniRef50_Q67TD4 Putative protoporphyrinogen oxidase n=1 Tax=Symbiobacterium thermophilum RepID=Q67TD4_SYMTH Length = 305 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 77/253 (30%), Gaps = 47/253 (18%) Query: 144 ARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEP--------QLADAPQTVSWKLE 195 D L VLG L +++ + ++ + Q + E Sbjct: 35 VADAEREAAWLLAHVLGCRAGALVARRSEPLAPEASDEYAALVARRAAREPLQYILGTEE 94 Query: 196 GTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEG---------EIVDLGCGNGVIGLTL 246 T V LD ++ L G + D+G G+G I + + Sbjct: 95 FMGLTFRVTPAVLIP-RLD--TAALVEQAVARLTGGAAEARGVLRVADIGTGSGAIAVAV 151 Query: 247 LDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV--EPFRFNAVLC 304 P A+VV VD SP A+A + N N DR F + L+ + E RF A+L Sbjct: 152 AHLLPHAQVVAVDLSPEALAVAAENARLNGV--ADRVRFRQGDLLAPLAEEGGRFAAILS 209 Query: 305 NPPFH---------------------QQHALTDNVAWEMFHHARRCLKINGELYIVANRH 343 NPP+ + A L+ G L + Sbjct: 210 NPPYIREDEIAGLMPEVRDWEPRLALVAGDDGLAFYRRLAREAPAFLEPGGFLGVEV--G 267 Query: 344 LDYFHKLKKIFGN 356 + + +F Sbjct: 268 IGQAPAVAALFRE 280 >UniRef50_C4G2U0 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2U0_ABIDE Length = 283 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 83/253 (32%), Gaps = 32/253 (12%) Query: 144 ARDIHTSTLELFEKVLGPTTTT--------LAWKKARLINCTFNEPQLADAPQTVSWKLE 195 ++ + EKV G + K V + Sbjct: 24 VKEAELDARYILEKVSGLNRAEYFLHSDDKIDNDKTEEFLRLIERRSERIPLSYVIGTRD 83 Query: 196 GTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE-IVDLGCGNGVIGLTLLDKNPQAK 254 T + NV + + ++ +G+ ++D+ G+G I +++ ++ Sbjct: 84 FMGLTFKVNENVLIPEQ---ETELLAEEVIKHCKGKTVLDMCTGSGCIAISVSLLGEPSE 140 Query: 255 VVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHAL 314 V D S A+ ++ N E +F+ + + F+ ++ NPP+ + + Sbjct: 141 VTASDISDKALEVAKENAEFLNAST---VKFIKGDLFENIT-GSFDIIVSNPPYIETRVI 196 Query: 315 TDNVAWEMFHHARRCLKING-----ELY-IVANRHLDYFHKLKKIFGN--------CTTI 360 + L ++G + Y + + + Y +K +IF T I Sbjct: 197 EELEPE--VRDYIPRLALDGDEDGLKFYKNITKKAIKYLNKNARIFYEIGYNQSEAVTDI 254 Query: 361 ATNNKFVVLKAVK 373 N F +K +K Sbjct: 255 LLENGFEEIKIIK 267 >UniRef50_Q5QUZ9 Protoporphyrinogen oxidase n=1 Tax=Idiomarina loihiensis RepID=Q5QUZ9_IDILO Length = 281 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 58/191 (30%), Gaps = 31/191 (16%) Query: 172 RLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQH---LPENL 228 R Q ++ + E + +A+ ++ L Sbjct: 53 RHYEECILARQKGKPVAHITGRREFWSLMLEVNASTLIPR---PDTETLVEAALSLELPE 109 Query: 229 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN 288 ++DLG G G + L L + P +V D+S AV +R N + E + + Sbjct: 110 NARVLDLGTGTGAVALALKSERPGWQVWACDKSGDAVELARRNSQALGL----NVEILCS 165 Query: 289 NALSGVEPF-RFNAVLCNPPFHQQHALTDNV--------------------AWEMFHHAR 327 N V +F+ +L NPP+ ++ + A Sbjct: 166 NWFQSVPKSLKFDLILSNPPYIDAGDPHLSMGDVRFEPQTALIAENNGLADIETIIKEAN 225 Query: 328 RCLKINGELYI 338 L G L + Sbjct: 226 NHLADQGWLLL 236 >UniRef50_B5YIQ8 HemK family protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIQ8_THEYD Length = 279 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 39/258 (15%), Positives = 85/258 (32%), Gaps = 42/258 (16%) Query: 143 KARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIH 202 +A++I L++ + L + ++A I + Q + + + I Sbjct: 20 EAQEIICHVLKIDKIQLYTENPEITSEQAHTIKSLIERRLKKEPLQYIIGECYFYNIKIK 79 Query: 203 NHANVFSRTGLDIGARFFMQHLPENL------EGEIVDLGCGNGVIGLTLLDKNPQAKVV 256 V ++ + E I+DL G+G I L + P+ ++ Sbjct: 80 VGRGVLIPR---PETEILVEQVLERQKLISNTGNRILDLCTGSGCIALAIGKNAPEFQIF 136 Query: 257 FVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ------ 310 +D+S AV + N N + F++ + + + F + NPP+ + Sbjct: 137 GIDKSEKAVKYATENKALNNIK---NVIFLVGDMFNPFKEKIFACITANPPYVKTDEISK 193 Query: 311 ---------------QHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG 355 N ++ +A + L +G +++ + Sbjct: 194 LQPEIKNYEPLEALNGGEDGLNFYRKIIENAEKYLLNSGLIFLEIGQGQA---------K 244 Query: 356 NCTTIATNNKFVVLKAVK 373 IA + F V++ VK Sbjct: 245 AVQNIALMSGFNVIEVVK 262 >UniRef50_UPI00016C59E8 modification methylase, HemK family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C59E8 Length = 291 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 65/252 (25%), Gaps = 35/252 (13%) Query: 127 ALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARL--------INCTF 178 +R ++ T + L VL T L + Sbjct: 10 TVRALLVWTTDFLKTKGVEAAKLEAELLLAHVLQTDRTYLTMRFDEEPTDAERAKYKELI 69 Query: 179 NEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARF--FMQHLPENLEGEIVDLG 236 + V D ++ L ++D+G Sbjct: 70 TRRLAGWPVAYLVGSRGFYLLNFDVDPAVLIP-RSDTETLVGEALKRLKPLTAPAVLDIG 128 Query: 237 CGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 296 G+G I ++L + + V D SP A+A ++ N N DR F+ + + + Sbjct: 129 TGSGCIAVSLAHQKKDSHVTATDVSPDALAVAKRNAIKNNV--ADRMTFLQGDLFAPLPA 186 Query: 297 F-RFNAVLCNPPFHQ---------------------QHALTDNVAWEMFHHARRCLKING 334 F+ V+ NPP+ + LK G Sbjct: 187 GVTFDLVVSNPPYIAQSEFAELAPDVRDHEPRVALDGGPDGLAFYRRIAAAVGPFLKPGG 246 Query: 335 ELYIVANRHLDY 346 L + D Sbjct: 247 SLLLEIGWKQDA 258 >UniRef50_C6X4E9 Putative protoporphyrinogen oxidase n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X4E9_FLAB3 Length = 285 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 76/221 (34%), Gaps = 48/221 (21%) Query: 186 APQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL--------PENLEGEIVDLGC 237 Q + + E + NV ++ +N +I+D+G Sbjct: 72 PFQQILGETEFYGLNFFVNENVLIPR---PETEELLELAIAEITKLTVKNQSLKILDIGT 128 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G+G+I + L P A++ +D S A+ +R N + + F+ + L G Sbjct: 129 GSGIIPVVLKKHFPAAELSAIDYSEKALEVARKNADFHQV----NINFIHQDYLGGELNG 184 Query: 298 RFNAVLCNPPFHQQHALTDNV-----------------------AWEMFHHARRCLKING 334 F+ ++ NPP+ D + ++ + + L G Sbjct: 185 IFDIIISNPPYI-GRDENDEISDSVKNFEPLMALFAPAENPLIFYEKIANDCKTHLSDGG 243 Query: 335 ELYIVANRHLDYFHKLKKIFGN-------CTTIATNNKFVV 368 L++ N+ L + +F ++ N++FVV Sbjct: 244 MLFLEINQKLGSET--RDLFTEVLHEVRLVKDLSGNDRFVV 282 >UniRef50_A5TTN6 Polypeptide chain release factor methyltransferase HemK n=16 Tax=Fusobacterium RepID=A5TTN6_FUSNP Length = 383 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 87/269 (32%), Gaps = 53/269 (19%) Query: 143 KARDIHTSTLE---LFEKVLGPTTTTLAWKKARLINCTFN---------EPQLADAPQTV 190 K + S L+ +F VL + TL + +R I + Q + Sbjct: 97 KKNGVPNSLLDAEYIFSDVLKVSRNTLKYSMSREIKEEDKDKIREMLVLRAKKRKPLQYI 156 Query: 191 SWKLEGTDWTIHNHANVFSRTGLDIGARFFMQH----LPENLEGEIVDLGCGNGVIGLTL 246 + E V D ++ + + E I+D+G G+G I + + Sbjct: 157 LGEWEFYGLPFKVSEGVLIP-RAD--TEILVEQCIQLMRDIEEPNILDIGTGSGAISIAI 213 Query: 247 LDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV-EPFRFNAVLCN 305 ++ + V +D + A+ + N N E F+ +N + + F+++ ++ N Sbjct: 214 ANELKSSSVTGIDINEKALKLANENKILNKIE---NVNFIESNLFEKLDKDFKYDLIVSN 270 Query: 306 PPFHQQHA---------------------LTDNVAWEMFHHARRCLKINGELYIVANRHL 344 PP+ + E+ A LK G L Sbjct: 271 PPYISKEEYEILMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKDTGYLAYEI---- 326 Query: 345 DYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 Y + + I +N F +L VK Sbjct: 327 GYNQA-----KDVSKILQDNNFAILSIVK 350 >UniRef50_B8CZ26 Modification methylase, HemK family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZ26_HALOH Length = 285 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 85/265 (32%), Gaps = 46/265 (17%) Query: 150 STLELFEKVLGPTTTTLAWK-----KARLINCTFN---EPQLADAPQTVSWKLEGTDWTI 201 L +L L K K + + ++ E Sbjct: 25 DAEVLLAHLLDMERIQLYVKYDLPLKNKEVEAYREMVINRARGIPVAYLTGHKEFMSLDF 84 Query: 202 HNHANVFSRTGLDIGARFFMQHLPENLEGE------IVDLGCGNGVIGLTLLDKNPQAKV 255 + +V ++ + + + IVD+G G+GVI ++L P A+V Sbjct: 85 KVNRSVLIPR---PETEILVEEIISLCQAKNIDNPNIVDVGTGSGVIAVSLAHYLPGARV 141 Query: 256 VFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV---EPFRFNAVLCNPPF---- 308 + +D S A+ +R N++ + +R + + N L + E N V+ NPP+ Sbjct: 142 LGIDISDKALEVARTNIKRHNL--GERVKVIKGNLLDPLIKMEKDNVNIVVSNPPYLTGN 199 Query: 309 ----------------HQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL--DYFHKL 350 A + E+ A + L G L + H L Sbjct: 200 EMKKLPLEVTYEPSQALDGGADGLKIYRELIPRALKVLVPGGILGLEIGYHQADSIRDIL 259 Query: 351 KKI-FGNCTTIATNNKF-VVLKAVK 373 + +G+ + + V+ A K Sbjct: 260 SGLPWGDIRVLQDYSGLDRVVIARK 284 >UniRef50_Q1K272 Modification methylase, HemK family n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K272_DESAC Length = 293 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 59/198 (29%), Gaps = 33/198 (16%) Query: 174 INCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE-- 231 I + Q + E V G ++ LE Sbjct: 61 IRQLVARRAKREPLQYIVGHTEFWSLPFKVAPGVLIPRG---DTEILVEEALRLLEDNTT 117 Query: 232 ----IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMI 287 ++D+G G+G I + L P +V VD P A+A ++ N E N +R F Sbjct: 118 SQQPVLDVGTGSGAIAVALAHSCPDLQVEAVDLQPEALAQAQANAELNGV--AERLSFRQ 175 Query: 288 NNALSGVEPFRFNAVLCNPPFH---------------------QQHALTDNVAWEMFHHA 326 + ++ + + V+ NPP+ Q + + + A Sbjct: 176 QD-MAVLSGGPYRLVVSNPPYIREDEMDGLMPEVREHEPAVALQAGSDGLDCYRLLCEQA 234 Query: 327 RRCLKINGELYIVANRHL 344 L G L + Sbjct: 235 LNLLIPGGWLLVEVGAGQ 252 >UniRef50_UPI000185CC67 protein-(glutamine-N5) methyltransferase, release factor-specific n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185CC67 Length = 287 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 79/221 (35%), Gaps = 35/221 (15%) Query: 156 EKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDI 215 VL T L + I E Q A Q + + E NV Sbjct: 40 ADVLANADTLLTDDIKQSIQQAITELQTAKPIQYILGETEFFSNRFFVDENVLIPR---P 96 Query: 216 GARFFMQHL-----PENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRL 270 + + +N I+D+G G+G I ++L P++ V +D SP A+ ++ Sbjct: 97 ETEELVDWVLQTYPDKNYPLHILDIGTGSGCIPISLAKALPKSVVTAIDVSPKAITVAQR 156 Query: 271 NVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCNPPFHQQ------------------ 311 N + N + +F+ + L P +++ ++ NPP+ ++ Sbjct: 157 NADRNGVK----IQFLQCDILQTKTLPQKYDVIISNPPYVRELEKTEMHSNVLSYEPHLA 212 Query: 312 ----HALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFH 348 + ++ A+R LK G L+ N++L Sbjct: 213 LFVPNERPLLFYEQIASLAQRYLKPEGSLFFEINQYLAAEM 253 >UniRef50_C6XAY7 Modification methylase, HemK family n=18 Tax=cellular organisms RepID=C6XAY7_METSD Length = 297 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 74/235 (31%), Gaps = 39/235 (16%) Query: 143 KARDIHTSTLELFEKVLGPTTTT---------LAWKKARLINCTFNEPQLADAPQTVSWK 193 ++R+ L + LG L A + + + + Sbjct: 22 ESREARNEARMLMSQALGNVEHAWLIAHESDALPSAVASAFHDLLHRRLAGEPIAYILGN 81 Query: 194 LEGTDWTIHNHA-NVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQ 252 E + + R + + +P E++DLG G G I L + P+ Sbjct: 82 REFFGLRLAVSPATLIPRPDTETLVEAALARIPSEDTREVLDLGTGTGAIALAIAAHRPK 141 Query: 253 AKVVFVDESPMAVASSRLNVETNMPEALD---------RCEFMINNALSGVEPFRFNAVL 303 ++V+ VD S A+ +R N E + EF + + + + +F+ ++ Sbjct: 142 SRVIGVDASAAALQVARQNAEALGLAITEPDTHGITKGNVEFRLGSWFTPLAGLKFDVIV 201 Query: 304 CNPPFH--------------------QQHALTDNVAWEMFHHARRCLKINGELYI 338 NPP+ A + + HA + +G L + Sbjct: 202 SNPPYIRKDDPHLQQGDLRHEPFSALASGADGLDDIRIIVQHAPAHFQPSGWLLL 256 >UniRef50_C7RH19 Modification methylase, HemK family n=4 Tax=Anaerococcus RepID=C7RH19_ANAPD Length = 262 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 65/214 (30%), Gaps = 33/214 (15%) Query: 186 APQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENL--EGEIVDLGCGNGVIG 243 Q + E + + ++ + I+D+G G+G I Sbjct: 55 PLQYAIGEWEFYGLNFKVDERALIPR---FETEIIVDFIIKSPYKKNRILDIGTGSGAIS 111 Query: 244 LTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVL 303 ++L P ++++ D A++ +R N + F+ ++ + +F+ ++ Sbjct: 112 ISLARNLPTSEIIGSDIEEKALSLARENKKRLKAS---NVSFIKSDLFEEIS-EKFDIII 167 Query: 304 CNPPFHQQH--------------------ALTDNVAWEMFHHARRCLKINGELYIVA--N 341 NPP+ Q + A L G L + Sbjct: 168 SNPPYINQTDYDKLDERLYHEPKSALLASEDGLYFYKRIIKEANSYLNDGGRLVFEIGYD 227 Query: 342 RHLDYFHKLKK-IFGNCTTIATNNKF-VVLKAVK 373 + L + F N + N F + A K Sbjct: 228 QKQRICELLNESDFKNIKCMKDYNDFDRFIIAEK 261 >UniRef50_C2D8G1 Putative uncharacterized protein n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D8G1_9ACTN Length = 526 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 65/192 (33%), Gaps = 31/192 (16%) Query: 174 INCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRT-----GLDIGARFFMQHLPENL 228 ++ Q ++ ++ + V +DIG + + Sbjct: 62 MHQRVEARSQGKPLQYITGEMPFRHIIMQCKPGVLIPRPETEVLVDIGIAALKEAHEYHR 121 Query: 229 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN 288 + ++++G G+G I L+L + V+ D S A+ ++ N + E R F+ Sbjct: 122 QPRVLEIGTGSGCIALSLASEVDSCTVLATDVSQDALELAQRNCQALHLEH--RVTFVSC 179 Query: 289 NALSGVEP---FRFNAVLCNPPFHQ---------------------QHALTDNVAWEMFH 324 + GV P +F+ ++ NPP+ ++ ++ Sbjct: 180 SIAQGVNPSYYGQFDLLISNPPYVPTSAVKTLPAEVALFEPHLALDGGKDGLDIFQKILE 239 Query: 325 HARRCLKINGEL 336 A L+ G L Sbjct: 240 TAPHMLRPGGML 251 >UniRef50_C6VIB1 Protoporphyrinogen oxidase (Putative) n=3 Tax=Lactobacillus plantarum RepID=C6VIB1_LACPJ Length = 288 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 64/205 (31%), Gaps = 28/205 (13%) Query: 172 RLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRT-GLDIGARFFMQHLPENLEG 230 + + Q V T+ V + + + +P Sbjct: 59 HAYQQGIDRVVAGEPVQYVLGDAPFYGLTLQVDPAVLIPRVETEELVDWILTDVPATAPV 118 Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 ++D+G G+G I L + + P ++ D S A+ ++ N + + + + ++ Sbjct: 119 RLLDVGTGSGAIALAIKHERPAWEITASDISTAALQVAKANADRLHLD----VKLVHSDL 174 Query: 291 LSGVEPFRFNAVLCNPPFHQ---------------------QHALTDNVAWEMFHHARRC 329 L+ V F+ ++ NPP+ + ++ Sbjct: 175 LTSVSAQPFDIIVSNPPYIAASEKDVMDASVLAHEPQTALFADHDGLALYEQLATTVADH 234 Query: 330 LKINGELYIVANRHLDYFHKLKKIF 354 L G LY+ H L+ +F Sbjct: 235 LTSTGRLYLEFGYHQG--PALQTLF 257 >UniRef50_C4Z910 Predicted rRNA or tRNA methylase n=10 Tax=Bacteria RepID=C4Z910_EUBR3 Length = 283 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 26/218 (11%), Positives = 58/218 (26%), Gaps = 34/218 (15%) Query: 174 INCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPE--NLEGE 231 ++ Q + + E ++NV ++ + Sbjct: 57 YQALLSKRAERIPLQYIVGEQEFMGLKFRVNSNVLIPRQ---DTETLVEEALKVIEPGMR 113 Query: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291 ++D+ G+G I +++L D S A+ ++ N N +F ++ Sbjct: 114 VLDMCTGSGCIIISILKNTTNVDGAACDISKQALNVAKENARINGVF----VDFERSDLF 169 Query: 292 SGVEPFRFNAVLCNPPFH---------------------QQHALTDNVAWEMFHHARRCL 330 V ++ ++ NPP+ + R L Sbjct: 170 EHV-DEMYDVIVSNPPYIRSDEIPHLMPEVSVFEPHEALDGSEDGLLFYRRIIKDCRANL 228 Query: 331 KINGELYIVAN-RHLDYFHKLKKI--FGNCTTIATNNK 365 K G L ++ + F + I Sbjct: 229 KPQGRLLFEIGCDQGRQVSEMMQFAGFSDVHVIKDLAG 266 >UniRef50_B1CAP0 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CAP0_9FIRM Length = 279 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 74/220 (33%), Gaps = 33/220 (15%) Query: 174 INCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEG--- 230 N+ ++ E H ++++ E+ +G Sbjct: 57 YEQLVNKRCAHVPFGYITGIKEFMGLDFHVDRETLIPR---PETEIIVEYMIEHFKGITL 113 Query: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290 +I+++G G+G I ++ ++ VD + A++ + N+E + + DR +F+ ++ Sbjct: 114 DILEIGVGSGCISISTAKYLENVNILGVDINEKALSIANKNIEYHNVD--DRVKFIRSDI 171 Query: 291 LSGVEPFRFNAVLCNPPFH---------------------QQHALTDNVAWEMFHHARRC 329 VE +F+ ++ NPP+ E+ +A + Sbjct: 172 YENVE-GKFDVIISNPPYIRKDIIETLEDDVKKYEPILALDGGEDGLYFYREIIKNASKY 230 Query: 330 LKINGELYIVANRHLDYFHK---LKKIFGNCTTIATNNKF 366 L +G + K ++ F N I F Sbjct: 231 LNESGHIIFEIGYDQGEQVKDLLIQNNFTNIEIINDLAGF 270 >UniRef50_A4AH74 Methyltransferase n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AH74_9ACTN Length = 290 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 80/245 (32%), Gaps = 34/245 (13%) Query: 127 ALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKA----------RLINC 176 ++ ++ T +++ + L VL + L + + Sbjct: 8 SVADLIGGGTELLSAGGVQSPAVDAELLIAHVLELSRGELRVRAVTGATVPGELESTVRE 67 Query: 177 TFNEPQLADAPQTVSWKLEGTDWTIHNHANVF-SRTGLDIGARFFMQHLPEN--LEGEIV 233 F + Q ++ + + VF R + +F + L + E V Sbjct: 68 LFARRAAREPLQHITGVAPFRNLELRVGPGVFVPRPETETVVQFAIDALNASATPEPIGV 127 Query: 234 DLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG 293 DLG G+G I L++ + P++ + V+ SP A+ + N + + +A + Sbjct: 128 DLGTGSGAIALSMATEVPRSHIYAVELSPDAMPYTSENFRRYGADNATLINADLGDAFTE 187 Query: 294 VEPFRFNAVLCNPPFHQ--------------------QHALTDNVAWEMFHHARRCLKIN 333 + + V+ NPP+ +V + A+R L Sbjct: 188 L-DGTVDVVISNPPYIPAAAIPRDIEVQLHDPALALYGGEDGMDVVRRVSLTAKRLLHPG 246 Query: 334 GELYI 338 G L + Sbjct: 247 GTLVL 251 >UniRef50_Q3JE27 Modification methylase HemK n=2 Tax=Nitrosococcus oceani RepID=Q3JE27_NITOC Length = 283 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 68/241 (28%), Gaps = 34/241 (14%) Query: 127 ALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTL-AWKKARL-------INCTF 178 ++ + + + L +L + L AW RL Sbjct: 6 SIAEAIEFAGNRLVSG--DGGRLEAERLLAYLLKVERSYLYAWSDRRLTPTQWVSFQRLL 63 Query: 179 NEPQLADAPQTVSWKLEGTDWTI-HNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGC 237 + + E + A + R + +Q L + DLG Sbjct: 64 QRRAKGEPLAYIRGWQEFWSLNLQVTEATLIPRPETEQVVELALQRLDLERALNVADLGT 123 Query: 238 GNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 297 G+G I L + + P+A+V+ D S + +R N F + + + Sbjct: 124 GSGAIALAMGSERPRARVIATDVSAETLEVARENGRRLGL---CNVTFRLGDWFVPLVGE 180 Query: 298 RFNAVLCNPPFHQ--------------------QHALTDNVAWEMFHHARRCLKINGELY 337 RF+ + NPP+ A + AR L G L Sbjct: 181 RFHLIASNPPYIAEGDPHLTQNGLAFEPDIALIAKDKGLGAARHIAMTAREHLLDGGWLL 240 Query: 338 I 338 + Sbjct: 241 L 241 >UniRef50_B2KDQ0 Protein-(Glutamine-N5) methyltransferase, release factor-specific n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDQ0_ELUMP Length = 277 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 40/282 (14%), Positives = 92/282 (32%), Gaps = 41/282 (14%) Query: 126 RALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTT--------TTLAWKKARLINCT 177 +++++++ I+ +I + L VL + + + A+ Sbjct: 2 ASIKELLSQAKEILKKNSIDEIDANAEFLLAHVLNLSRGVVLSNQEREVGAEDAQKYFDF 61 Query: 178 FNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEG--EIVDL 235 N+ L ++ + T ++V ++ L I+D+ Sbjct: 62 INKRLLGMPLAYITGTQDFCGHTFIVDSDVLVPR---PETEELVEISSSMLGKPKRILDM 118 Query: 236 GCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE 295 G+G I ++ K A+V VD S A+ ++ NV+ + E + + + Sbjct: 119 CTGSGCIACSMAMKYRSAQVTGVDNSMAALLTAEKNVKKFGLQ---NVELIYGDLFENIY 175 Query: 296 PFRFNAVLCNPPFHQ--------------------QHALTDNVAWEMFHHARRCLKINGE 335 F+ ++ NPP+ ++ ++ +A L+ G Sbjct: 176 GA-FDLIITNPPYIPTGDLAGLSREVKEEPQAALDGGENGLDIITQIILYAPDFLETGGL 234 Query: 336 LYIV--ANRHLDYFHKLKK-IFGNCTTIATNNK-FVVLKAVK 373 L + NR + K I+ + + + A K Sbjct: 235 LTMEYGINREREIEGLFDKNIWRSVEVKKDMFGIYRFVFAQK 276 >UniRef50_C2M761 Protein-(Glutamine-N5) methyltransferase, release factor-specific n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M761_CAPGI Length = 281 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 66/192 (34%), Gaps = 36/192 (18%) Query: 186 APQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLP----ENLEGEIVDLGCGNGV 241 Q + K +++ + V + + + I+D+G G+G Sbjct: 69 PIQYIYQKAHFLGLSLYVDSRVLIPRQ---ETEELVDWIVTSYMAAPQLRILDIGTGSGA 125 Query: 242 IGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP--FRF 299 I + L PQA + +D S A+A ++ N + + F+ + L GVE + Sbjct: 126 IAIALKKHLPQASLTAIDISEGALAVAQQNAKRHGVA----ITFLQQDIL-GVEDLGTSY 180 Query: 300 NAVLCNPPFH--------QQHALTDN--------------VAWEMFHHARRCLKINGELY 337 + ++ NPP+ + L ++ A R L G LY Sbjct: 181 DIIVSNPPYVRELEKKEMHANVLDYEPSLALFVPDDNPLLFYEKIAEIAARNLTEEGTLY 240 Query: 338 IVANRHLDYFHK 349 N++L Sbjct: 241 FEINQYLGQQTL 252 >UniRef50_Q03EK2 Methylase of polypeptide chain release factor n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03EK2_PEDPA Length = 283 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 73/233 (31%), Gaps = 42/233 (18%) Query: 174 INCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL-----PENL 228 + Q V+ K + V + ++ + Sbjct: 59 FQTAVKRVAKGEPVQYVTNKATFFGREFYVDKRVLIPR---VETEELVETILSKTKRSRQ 115 Query: 229 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN 288 ++D+G G+G I +TL + P+ V VD S A+ ++ N E++ +F + Sbjct: 116 RLRVLDIGTGSGDIAITLKLERPEWLVTAVDISKDALTVAQRNAESHEA----IVDFRLG 171 Query: 289 NALSGVEPFRFNAVLCNPPFHQQ---HALTDNVA------------------WEMFHHAR 327 + V+ RF+ ++ NPP+ H + +V + Sbjct: 172 SLFEPVQGERFDLIISNPPYIADNEKHEMDQSVIDFEPHQALFADDHGLFWYKRIADQLD 231 Query: 328 RCLKINGELYIVANRHLDYFHKLKKIF------GNCTTIAT-NNKFVVLKAVK 373 + L +GEL LKK F I + +L K Sbjct: 232 QYLVEHGELGCEIGYRQG--TDLKKYFLEKKYIDQAEVIKDLSQHDRILWVKK 282 >UniRef50_Q04XZ4 Methylase of polypeptide chain release factors n=4 Tax=Leptospira RepID=Q04XZ4_LEPBL Length = 286 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 41/276 (14%), Positives = 88/276 (31%), Gaps = 59/276 (21%) Query: 143 KARDIHTSTLE---LFEKVLGPTTTTLAWKKARL--------INCTFNEPQLADAPQTVS 191 + ++I ++ L+ L +L L RL + ++ Sbjct: 19 RKKEIPSARLDAEILLADLLNLQRVKLYVNFERLLTETEKNAYRERIVDRSKNKPTAYIT 78 Query: 192 WKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGE-----IVDLGCGNGVIGLTL 246 + + + V ++ + + +G ++DL G+G IG++L Sbjct: 79 GQKAFYNSVFFVNEKVLIPR---PETEELVEKILLDFKGNNSEQNVLDLCTGSGCIGISL 135 Query: 247 LDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR-FNAVLCN 305 + D S A+ ++ N + E + +F+ +N + F+ ++ N Sbjct: 136 KSARKDWNITLSDISKDALEIAKKNAIQIIGEG-NNIQFLESNLFLSIPKESEFDLIVTN 194 Query: 306 PPFHQQHALTD--------------------NVAWEMFHHARRCLKINGELYIVANRHLD 345 PP+ T+ ++ AR LK G+ Y+ Sbjct: 195 PPYIPISDKTEMMKDVVDYEPHLALFLEDPKEFLSKLIEDARIHLKEGGKFYMET----- 249 Query: 346 YFHKLKKIF-----------GNCTT-IATNNKFVVL 369 + L F G ++ ++FVVL Sbjct: 250 -YPSLAWTFVSESTTNGWKEGKVEKDLSGKDRFVVL 284 >UniRef50_Q30X17 Modification methylase, HemK family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30X17_DESDG Length = 297 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 73/221 (33%), Gaps = 18/221 (8%) Query: 126 RALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFN------ 179 R +R +T+ + ++AG S L VL L ++ ++ Sbjct: 10 RTIRDTLTAFSALLAGKAVDSPRLSAELLLAHVLRTDRLQLLVRRGHMLTEKEYAQAEKL 69 Query: 180 --EPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL----PENLEGEIV 233 + ++ E + + L P + Sbjct: 70 ILRRAEGEPVAYLTGSREFYGREFAVSTDTLIPR---PDTELLIDTLKKEYPPHAALRFA 126 Query: 234 DLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG 293 DLG G+G I +++ + P A VD S A+ ++R N + DR F+ + S Sbjct: 127 DLGTGSGCIAVSVAAEMPSAHGTAVDISSGALHTARENAARHRV--ADRVAFVQADFTSP 184 Query: 294 V-EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKIN 333 + P F+ VL NPP+ H +R L + Sbjct: 185 LFRPASFDVVLSNPPYVSATEYETLSPEVRCHEPQRALVPD 225 >UniRef50_D1N6A4 Protein-(Glutamine-N5) methyltransferase, release factor-specific n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N6A4_9BACT Length = 282 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 67/222 (30%), Gaps = 32/222 (14%) Query: 156 EKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDI 215 ++ + + R I + Q + D + V Sbjct: 40 PELFLCAGEPVPAELERHIRELARRRANREPLQYLLGVAYFMDLELEVTPAVLIPR---P 96 Query: 216 GARFFMQHLPE--NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273 ++ + G ++DLG G+G I L + + P ++ VD S A+ +R N Sbjct: 97 ETELLAEYAVKHLPEGGSMLDLGTGSGAIALAVAAERPDVRITAVDVSSDALEVARRNRV 156 Query: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHA-----------------LTD 316 E F+ ++ S + RF+ V N P+ Q Sbjct: 157 RCGGE----VRFLQSDLFSELPGERFDLVGANLPYVTQEEYPALEPEVRLFEPQLALTAP 212 Query: 317 NVAWEMFHHARR----CLKINGELYIVANRHLDYFHKLKKIF 354 + + + A R L G + +L ++F Sbjct: 213 DGGFRLIERAARELADHLNPGGRAIFELSP--PQAPRLAELF 252 >UniRef50_C6NTA1 Hypothetical adenine-specific methylase yfcB n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NTA1_9GAMM Length = 304 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 72/236 (30%), Gaps = 28/236 (11%) Query: 142 AKARDIHTSTLELFEKVLGPTTTTLAWKKAR--LINCTFNEPQLADAPQTVSWKLEGTDW 199 +A + L L + L L + R +++ + L + + Sbjct: 43 GEASALVARRLGLEPEDLPEVRQCLLTRAEREAILDAFYQREILRRPTAYILGEAWFAGL 102 Query: 200 TIHNHANVFSRTGL--DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVF 257 V L F + I+++G G+G + + L + PQA V Sbjct: 103 RFAVDERVLIPRSLLEPFIEEGFAPWVQAERVRRILEIGTGSGCMAVALARQFPQASVDA 162 Query: 258 VDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFH-------- 309 VD SP + + NV + E +R ++ S V P RF+ ++ NPP+ Sbjct: 163 VDISPQVLELAAQNVRRHGLE--ERIRLYTSDIFSAVGPARFDLIVSNPPYVDAAAMADL 220 Query: 310 ------------QQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKI 353 + + A L G L V L + Sbjct: 221 PPEYRHEPRLALAAGEDGLDCILPLLDQAPDHLLPGGAL--VVETGDAEHALLARR 274 >UniRef50_A9IMM0 Methylase n=5 Tax=Bartonella RepID=A9IMM0_BART1 Length = 288 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 80/239 (33%), Gaps = 48/239 (20%) Query: 166 LAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDI--GARFFMQH 223 L+ + R I + + E + S+ L+ + Sbjct: 52 LSSEHIRQIEQAIKRRIAGEPVYRIIGAREFYGISFA-----LSQETLEPRPDTETLIDL 106 Query: 224 LPENLEGEI--------VDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN 275 + L+ ++ +D+G G+G I + +L + PQ+ V VD S A+ ++ N + Sbjct: 107 VLPFLKKQVKNSKKTTFLDMGTGSGAIAIAILKQIPQSYAVAVDISEDALKTATKNAK-- 164 Query: 276 MPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ---------------------QHAL 314 + + R ++++ V RF+ ++ NPP+ Sbjct: 165 NADVIHRFTPLLSDWFDSVTD-RFDFIVSNPPYIPEKDINKLAKEVRLHDPLRALIGGKD 223 Query: 315 TDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVK 373 + ++ H A LK NG + + Y + + N F L+ K Sbjct: 224 GLDFYRKLAHEAANYLKENGTIAVEI----GYSQE-----KEVCDLFKKNGFQCLEMRK 273 >UniRef50_B3EU58 Modification methylase, HemK family n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3EU58_AMOA5 Length = 285 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 72/214 (33%), Gaps = 36/214 (16%) Query: 173 LINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHL---PENLE 229 ++ + Q + + + + +V +Q + Sbjct: 59 ILAEIVQRIHQHEPIQYILGEAPFMNRNFFVNPSVLIPR---PETEELVQLIIKENSKPG 115 Query: 230 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINN 289 I+D+G G+G I +TL A+V +D S A+ +R N + ++ N Sbjct: 116 LHILDIGTGSGCIAITLAKDLSDAQVDGLDISEPALKVARSNAQRLQA----NVNWIQAN 171 Query: 290 AL-SGVEPFRFNAVLCNPPFH--------QQHALTDNVA--------------WEMFHHA 326 L + +++ ++ NPP+ QQ L A ++ A Sbjct: 172 ILQDPLPGRKWDIIVSNPPYVCLSEKEQMQQRVLAYEPAQAIFVSDEAPLIFYEQIIQLA 231 Query: 327 RRCLKINGELYIVANR--HLDYFHKLK-KIFGNC 357 L+ G+LY+ N L KL K F N Sbjct: 232 STYLQPTGKLYLEINERFGLALASKLADKQFNNI 265 >UniRef50_C5JB08 Modification methylase, HemK family n=1 Tax=uncultured bacterium RepID=C5JB08_9BACT Length = 321 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 62/208 (29%), Gaps = 28/208 (13%) Query: 163 TTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGL-----DIGA 217 ++ RL + + + + H V L D + Sbjct: 68 RPLTGRQRRRLAWLIALRTRRRLPLPYLVGEAFFAGRSFHVDRRVLIPRSLIENILDD-S 126 Query: 218 RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP 277 + G I+DLG G+G + +TL P A+V D P A+A + +N Sbjct: 127 EGLALWMDPERLGRILDLGTGSGCLAITLALAYPGARVDGSDICPRALAVADINRRRFRL 186 Query: 278 EALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ--------------------QHALTDN 317 DR + ++ + ++ ++ NPP+ Sbjct: 187 -GGDRLRLIRSDLFQNLPRECYDLIVANPPYVAPGEYASLPREYRHEPGRALRAGEGGLA 245 Query: 318 VAWEMFHHARRCLKINGELYI-VANRHL 344 + + A L G L V +R Sbjct: 246 LVAAILRQAADHLAPGGWLICEVGDRGQ 273 >UniRef50_Q0HYK7 Modification methylase, HemK family n=17 Tax=Alteromonadales RepID=Q0HYK7_SHESR Length = 286 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 66/211 (31%), Gaps = 29/211 (13%) Query: 151 TLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSR 210 + + L ++ + Q + + E + Sbjct: 37 LNKSRAFLYTWPEKALTVEQWKRFQQMVQRRQQGVPVAHIVGEREFWSLPFIVNDTTLIP 96 Query: 211 TGLDIGARFFMQ---HLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVAS 267 ++ +LP +++DLG G G I L L + ++ VD+ AVA Sbjct: 97 R---PDTEILVETALNLPLESNAKVLDLGTGTGAIALALASERATWQITAVDKVEEAVAL 153 Query: 268 SRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------- 310 ++ N E + E + ++ S ++ F+ ++ NPP+ Sbjct: 154 AKANRTNLKLE---QVEILQSDWFSAIKAHDFDLIVSNPPYIDEADEHLHQGDVRFEPQS 210 Query: 311 ---QHALTDNVAWEMFHHARRCLKINGELYI 338 + + AR LK NG + + Sbjct: 211 ALTAADEGFADLYYIAKTARDYLKPNGYILL 241 >UniRef50_Q1GYE6 Modification methylase, HemK family n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYE6_METFK Length = 284 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 73/248 (29%), Gaps = 44/248 (17%) Query: 150 STLELFEKVLGPT----------TTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDW 199 L + LG +AR + + + E Sbjct: 29 EIRALMQHSLGDVDHAWLIAHGDEAVTDALRAR-FESLLARRIEGEPVAHILGRREFYGR 87 Query: 200 TIHNHA-NVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFV 258 + R+ + + +P EI+D+G G G IG+TL + PQAKV V Sbjct: 88 DFIVTPDTLIPRSDTETLVEAALDRIPVGQTCEILDMGTGTGAIGITLALERPQAKVTIV 147 Query: 259 DESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQ------- 311 D S A+A +R N + ++ S + F+ ++ NPP+ + Sbjct: 148 DYSEAALAIARENARQLSAH---NVTALRSDWFSALGGRCFDLIVSNPPYIEAADPHLQQ 204 Query: 312 -------------HALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCT 358 A + + A L NG L + Sbjct: 205 GDLRFEPIAALASGADGLDDIRILSAQAADHLITNGWLMLEHGYQQGA---------AVR 255 Query: 359 TIATNNKF 366 ++ + F Sbjct: 256 SLLQQHGF 263 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.155 0.432 Lambda K H 0.267 0.0471 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,275,357,392 Number of Sequences: 3077464 Number of extensions: 104257644 Number of successful extensions: 372222 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 4090 Number of HSP's successfully gapped in prelim test: 17128 Number of HSP's that attempted gapping in prelim test: 343453 Number of HSP's gapped (non-prelim): 24003 length of query: 378 length of database: 1,040,396,356 effective HSP length: 130 effective length of query: 248 effective length of database: 640,326,036 effective search space: 158800856928 effective search space used: 158800856928 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 94 (40.6 bits)