 |
| Job Description | P21515 | | Confidence | 2.79% | Date | Thu Jan 5 11:38:26 GMT 2012 |
| Rank | 93 | Aligned Residues | 21 |
| % Identity | 14% | Template | d1a8oa_ |
| SCOP info | Acyl carrier protein-like
| Retrovirus capsid dimerization domain-like
| Retrovirus capsid protein C-terminal domain
|
| Resolution | 1.70 |
|
|   |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
P | D | F | P | L | Q | E | F | V | C | Y | A | R | E | Q | V | M | T | I | L | P |
| Query Conservation |   |
  |   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|
|
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |
| Template Sequence |   |
P | K | E | P | F | R | D | Y | V | D | R | F | Y | K | T | L | R | A | E | Q | A |
| Template Known Secondary structure |   |
T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
| Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|