Phyre 2 alignment of P21515 with d1svda2

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Job Description | P21515
Confidence | 5.09% | Date | Thu Jan 5 11:38:26 GMT 2012
Rank | 25 | Aligned Residues | 26
% Identity | 42% | Template | d1svda2
SCOP info | Ferredoxin-like | RuBisCO, large subunit, small (N-terminal) domain | Ribulose 1,5-bisphosphate carboxylase-oxygenase
Resolution | 1.80

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . |  |  |  |  | . |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . |  |  |  |  | . |  |  |  |  |  |  |  |
Query Sequence |  | S | S | L | S | G | N | L | L | A | . | D | F | V | R | G | . | N | P | E | E | . | S | F | P | P | D | V | V | A
Query Conservation |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . |  |  |  |  | . |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . |  |  |  |  | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | S | L | V | G | N | V | F | G | F | K | A | V | R | G | L | R | L | E | D | V | R | F | P | L | A | Y | V | K
Template Known Secondary structure |  |  |  |  |  | S | S | G | G | G |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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