Phyre 2 alignment of P19769 with c1u9nA_

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Job Description | P19769
Confidence | 83.23% | Date | Thu Jan 5 11:37:35 GMT 2012
Rank | 121 | Aligned Residues | 40
% Identity | 28% | Template | c1u9nA_
PDB info | PDB header:dna binding protein | Chain: A: PDB Molecule:transcriptional repressor ethr; | PDBTitle: crystal structure of the transcriptional regulator ethr in2 a ligand bound conformation opens therapeutic perspectives3 against tuberculosis and leprosy
Resolution | 2.30 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | Q | F | Y | P | L | D | E | L | L | R | A | A | E | I | P | R | S | T | F | Y | Y | H | L | K | A | L | S | K | P | D | K | Y | A | D | V | K | K | R | I | S | E | I | Y | H | E
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Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | D | I | S | V | D | D | L | A | K | G | A | G | I | S | R | P | T | F | Y | F | . | . | . | . | . | Y | F | P | S | K | E | A | V | L | L | T | L | L | D | R | V | V | N | Q
Template Known Secondary structure |  | G | G |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |  | T | T | . | . | . | . | . | T |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |  |  |  |  |  | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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