Phyre 2 alignment of P19769 with c3dpjB_

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Job Description | P19769
Confidence | 74.53% | Date | Thu Jan 5 11:37:35 GMT 2012
Rank | 256 | Aligned Residues | 40
% Identity | 20% | Template | c3dpjB_
PDB info | PDB header:dna binding protein | Chain: B: PDB Molecule:transcription regulator, tetr family; | PDBTitle: the crystal structure of a tetr transcription regulator2 from silicibacter pomeroyi dss
Resolution | 1.90 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Query Sequence |  | Q | F | Y | P | L | D | E | L | L | R | A | A | E | I | P | R | S | T | F | Y | Y | H | L | K | A | L | S | K | P | D | K | Y | A | D | V | K | K | R | I | S | E | I | Y | H | E
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Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | Q | T | S | F | V | D | I | S | A | A | V | G | I | S | R | G | N | F | Y | Y | . | . | . | . | . | H | F | K | T | K | D | E | I | L | A | E | V | I | R | L | R | L | A | R
Template Known Secondary structure |  | T | T |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  | T | . | . | . | . | . | T |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . |  |  |  |  |  | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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