175 c1vmaA_ Probab=97.16   E-value=0.0023  Score=39.26  Aligned_columns=131  Identities=21%

Q ss_pred             CCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             24246879978999869999889999998525224532212222222222222222222222222221111000011234
Q batch____        19 DINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLA   98 (255)
Q Consensus        19 ~vsf~i~~Gei~~iiG~nGsGKSTLlk~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (255)
                      .+.+.-.++.+++++||+|+||||.+--|+..+.-.+..+.+-..+....                              
T Consensus        84 ~~~~~~~~~~vi~~~Gp~G~GKTTt~aklA~~~~~~g~~v~li~~D~~R~------------------------------  133 (294)
T c1vmaA_          84 KLNVPPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRA------------------------------  133 (294)
T ss_dssp             CCCCCSSSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCH------------------------------
T ss_pred             CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCH------------------------------
T ss_conf             00235789669999806887602489999999996799489997587686------------------------------


Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH-
Q ss_conf             6634568887642000112222222222334421030057799976310012331011169989999999999999986-
Q batch____        99 GIEKMQRLEIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTRDQMQTLLLKLWQE-  177 (255)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lS~g~~qri~la~al~~~p~ililDEPt~glD~~~~~~i~~~l~~l~~~-  177 (255)
                           -..+....+.+.+++.-.......++..-.++.+..++  ..+.+++++|-|-.+-.-.....=+..+.+.... 
T Consensus       134 -----gA~eQL~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~IlIDTaGr~~~d~~~~~el~~~~~~~~~~  206 (294)
T c1vmaA_         134 -----AAIEQLKIWGERVGATVISHSEGADPAAVAFDAVAHAL--ARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKK  206 (294)
T ss_dssp             -----HHHHHHHHHHHHHTCEEECCSTTCCHHHHHHHHHHHHH--HTTCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGT
T ss_pred             -----HHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHH--HCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf             -----47999999997619828974883698999999999999--77998999818889878579999999999996303


Q ss_pred             ----CCCEEEEEE
Q ss_conf             ----498799981
Q batch____       178 ----TGKQVLLIT  186 (255)
Q Consensus       178 ----~g~tvi~vs  186 (255)
                          ...++++++
T Consensus       207 ~~~~p~~~~LVl~  219 (294)
T c1vmaA_         207 IPDAPHETLLVID  219 (294)
T ss_dssp             CTTCCSEEEEEEE
T ss_pred             CCCCCCEEEEEEE
T ss_conf             5668853999811