11 c1vciA_ Probab=100.00  E-value=0  Score=335.08  Aligned_columns=226  Identities=32%

Q ss_pred             EEEEEEEEEECCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             79953899868889763242468799789998699998899999985252245322122222222222222222222222
Q batch____         2 LQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGL   81 (255)
Q Consensus         2 l~v~~l~~~y~~~~~l~~vsf~i~~Gei~~iiG~nGsGKSTLlk~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~   81 (255)
                      |+++||+|+|+++++|+|+||++++||++||+|+||||||||+|+|+|+++|++|+|+++|.++.......   .+....
T Consensus         7 i~~~~l~~~y~~~~~L~~isl~i~~Ge~~~l~G~nGsGKsTll~~l~g~~~p~~G~i~~~g~~~~~~~~~~---~~~~~~   83 (353)
T c1vciA_           7 VKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPKD---RNISMV   83 (353)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCGGG---TTEEEE
T ss_pred             EEEEEEEEEECCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHH---CEEECC
T ss_conf             99941899848889863232468899789998799988889999996687476007998888874578323---022023


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
Q ss_conf             22221111000011234663456888764200011222222222233442103005779997631001233101116998
Q batch____        82 LPWRNVQDNVAFGLQLAGIEKMQRLEIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALDA  161 (255)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lS~g~~qri~la~al~~~p~ililDEPt~glD~  161 (255)
                      ++..++.+++.+...  ............+.+..+++....++++.+||+||+||+++|+|++.+|+++||||||++||+
T Consensus        84 ~~~~~~~~n~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~LSgGq~qrv~iaral~~~p~llllDEP~s~LD~  161 (353)
T c1vciA_          84 FQHMTVYENIAFPLK--KFPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDA  161 (353)
T ss_dssp             CCCCCHHHHHHTTCC--CCCHHHHHHHHHHHHHHTTCGGGTTCCGGGCCSSCHHHHHHHHHHTTCCSEEEEESTTTTSCH
T ss_pred             CCCCEEEECCCCCCH--HHHHHHCCHHHHHHHHHCCCCEEECCCCEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCH
T ss_conf             332000001211210--000110000257876313851011025203576615768888985078659999561019888


Q ss_pred             HHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCEEEEEECCCEEEEECCCHHHHHHHHCCCCHHHHHHCH
Q ss_conf             9999999999999986498799981898999985898999827979999248878999873488889987197
Q batch____       162 FTRDQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSSGPGRVLERLPLNFARRFVAGESSRSIKSDP  234 (255)
Q Consensus       162 ~~~~~i~~~l~~l~~~~g~tvi~vsH~~~~v~~~adri~vl~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  234 (255)
                      .++.++++.|+++.++.|+|||++|||++++..+||||++|++|  ++++.++.+.+...............+
T Consensus       162 ~~~~~~~~~l~~~~~~~g~tvi~vtH~~~~~~~~~drv~vl~~G--~i~~~g~~~ei~~~p~~~~~a~~~g~~  232 (353)
T c1vciA_         162 KLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRG--QLLQIGSPTEVYLRPNSVFVATFIGAP  232 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEESCHHHHHHHCSEEEEEETT--EEEEEECHHHHHHSCSBHHHHHHSSSS
T ss_pred             HHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHCCEEEEEECC--EEEEECCHHHHHHCCCCCHHHHHCCCC
T ss_conf             99999999999999973982467730578888644889991047--572545988997378982278750887