49 c1nijA_ Probab=97.38   E-value=0.0016  Score=43.10  Aligned_columns=72  Identities=28%

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEE--------CCCCEECCCCEEEEEEC-----CCCCCHHHHHHHHHHC
Q ss_conf             2999728888775899999974186885799982--------56411259950899506-----5678999999998506
Q batch____       217 LVLVTGPTGSGKTVTLYSALQKLNTADINICSVE--------DPVEIPIAGLNQTQIHP-----RAGLTFQGVLRALLRQ  283 (461)
Q Consensus       217 lilv~GpTGSGKTTtL~a~l~~~~~~~~~I~tiE--------dPvE~~~~g~~q~~v~~-----~~g~t~~~~lr~~LR~  283 (461)
                      +.+|||--||||||+|..+++.  ..+.++..|+        |-.-..-.+....++..     ....++..++..++..
T Consensus         5 v~iitGfLGaGKTTll~~ll~~--~~~~~~avi~Nefg~~~iD~~ll~~~~~~v~~l~~GCiCC~~~~~~~~~l~~l~~~   82 (317)
T c1nijA_           5 VTLLTGFLGAGKTTLLRHILNE--QHGYKIAVIENEFGEVSVDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLLDN   82 (317)
T ss_dssp             EEEEEESSSSSCHHHHHHHHHS--CCCCCEEEECSSCCSCCEEEEEECTTSCEEEEETTSCEEECTTSCHHHHHHHHHHH
T ss_pred             EEEECCCCCCCHHHHHHHHHHC--CCCCEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCCEECCCHHHHHHHHHHHHHH
T ss_conf             8998089888988999999842--69973899971664442058898407972999779954213247789999999984


Q ss_pred             ------CCCEEEE
Q ss_conf             ------9989996
Q batch____       284 ------DPDVIMI  290 (461)
Q Consensus       284 ------dPDvI~i  290 (461)
                            .||.|+|
T Consensus        83 ~~~~~~~~d~i~I   95 (317)
T c1nijA_          83 LDKGNIQFDRLVI   95 (317)
T ss_dssp             HHHTSCCCSEEEE
T ss_pred             HCCCCCCCCEEEE
T ss_conf             1255468668998