253 d1rp1a2 Probab=98.48   E-value=4.5e-06  Score=51.54  Aligned_columns=140  Identities=11%

Q ss_pred             CCCCCCCEEEEECCCCCC--CHHHHHHHHHHHHCC-CCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf             988888505872254334--246999999999749-86401110347777765001123334432000257899999999
Q batch____        51 QSDGPLPVVIVVQEIFGV--HEHIRDICRRLALEG-YLAIAPELYFREGDPNDFADIPTLLSGLVAKVPDSQVLADLDHV  127 (271)
Q Consensus        51 ~~~~~~P~vv~~hG~~g~--~~~~~~~a~~la~~G-~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (271)
                      +.....|++|++||+.+.  ..+...+.+.|-.++ +.|+++|.+           ................+.+.+..+
T Consensus        65 ~f~~~kpt~iiIHG~~~~~~~~~~~~~~~all~~~d~NVI~VDW~-----------~~a~~~Y~~a~~n~~~vg~~ia~~  133 (330)
T d1rp1a2          65 NFQTDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWK-----------KGSQTSYTQAANNVRVVGAQVAQM  133 (330)
T ss_dssp             CCCTTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECH-----------HHHSSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECC-----------CCCCCCCCCHHCCHHHHHHHHHHH
T ss_conf             777317889997464678774238999999840388069996187-----------655665210001079999999999


Q ss_pred             HHHHHCC-CCCHHHEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCC
Q ss_conf             9998615-9884448998438854899999961576532553113355332112211001221125995799852788
Q batch____       128 ASWASRN-GGDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDKSLNSPKQPVDIATDLNAPILGLYGGQD  204 (271)
Q Consensus       128 ~~~~~~~-~~d~~~i~i~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D  204 (271)
                      +..+... ++++++|-++|+|+|+.+|-.++....++......-+.....................   |-++|.+.+
T Consensus       134 i~~L~~~~g~~~~~ihlIGhSLGAhvAG~aG~~~~~~~rItgLDPA~P~F~~~~~~~rLd~~DA~f---VdVIHT~~~  208 (330)
T d1rp1a2         134 LSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRTPGLGRITGLDPVEASFQGTPEEVRLDPTDADF---VDVIHTDAA  208 (330)
T ss_dssp             HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTSTTCCEEEEESCCCTTTTTSCTTTSCCGGGSSE---EEEECSCCS
T ss_pred             HHHHHHHCCCCHHHEEEEEECHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCE---EEEEECCCC
T ss_conf             999986339873235899871888888898863177422665144451115888433206774116---899971786