50 d1jkma_ Probab=99.94   E-value=6.2e-25  Score=153.39  Aligned_columns=239  Identities=15%

Q ss_pred             CCCCCCCCCCCEEEEEEEEC-CCEEEEEEEEECCCCCCCCCEEEEECCCCCCCHH-----HHHHHHHHHHCCCCCEEEEE
Q ss_conf             14121789884127999966-9829999999668988888505872254334246-----99999999974986401110
Q batch____        18 STIVQTPDDAIVAGFTSIPS-QGDNMPAYHARPKQSDGPLPVVIVVQEIFGVHEH-----IRDICRRLALEGYLAIAPEL   91 (271)
Q Consensus        18 ~~~~~~~~~~~~~~~v~~~~-~g~~i~~~l~~P~~~~~~~P~vv~~hG~~g~~~~-----~~~~a~~la~~G~~v~~~d~   91 (271)
                      ......+...+..+++++++ ||.+|++++|+|++..+++|+||++||+++....     +..+++.|+++||+|+.+||
T Consensus        67 ~~~~~~~~~~v~~~~~~~~~~dG~~i~~~~~~P~~~~~~~Pviv~~HGGg~~~g~~~~~~~~~~~~~la~~G~~VvsvdY  146 (358)
T d1jkma_          67 ALDLPTDRDDVETSTETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDF  146 (358)
T ss_dssp             CCCCTTCCCCEEEEEEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECC
T ss_conf             23477788883589899708999878999971688988852999946887214444413269999999978979999747


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCHHHHHHHHHHCCCC----CEEE
Q ss_conf             347777765001123334432000257899999999999861598844489984388548999999615765----3255
Q batch____        92 YFREGDPNDFADIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHNPQL----KAAV  167 (271)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~a~~~~~~----~~~~  167 (271)
                      |+............          ....+.+.+..+.........++..+...|.|.|+.++..++......    .+.+
T Consensus       147 Rlap~~~~e~~~p~----------~~~d~~~~~~~l~~~~~~~~~~~~~~~~~~~s~g~~la~~l~~~~~~~~~~~~~~v  216 (358)
T d1jkma_         147 RNAWTAEGHHPFPS----------GVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVY  216 (358)
T ss_dssp             CCSEETTEECCTTH----------HHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEE
T ss_pred             CCCCCCCCCCCCCH----------HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE
T ss_conf             87877776443631----------78999999986521001123466510156435899999999999669988736899


Q ss_pred             EECCCCCCCCCCCCCCCCHH-------------------------------------------HHHCCCCCEEEEECCCC
Q ss_conf             31133553321122110012-------------------------------------------21125995799852788
Q batch____       168 AWYGKLTGDKSLNSPKQPVD-------------------------------------------IATDLNAPILGLYGGQD  204 (271)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~-------------------------------------------~~~~~~~P~l~~~g~~D  204 (271)
                      ..++................                                           ......+|+|++||+.|
T Consensus       217 l~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~PP~li~~g~~D  296 (358)
T d1jkma_         217 ASIPYISGGYAWDHERRLTELPSLVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLPPFVVAVNELD  296 (358)
T ss_dssp             EESCCCCCCTTSCHHHHHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCCCEEEEEETTC
T ss_pred             EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCC
T ss_conf             98780056666754222333321101357546989999999862788755225120324444314428995999985987


Q ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             76699999999999997799789999877984344788865698999999999999999862867
Q batch____       205 NSIPQESVETMRQALRAANAKAEIIVYPDAGHAFNADYRPSYHAASAEDGWQRMLEWFKQYGGKK  269 (271)
Q Consensus       205 ~~vp~~~~~~~~~~l~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~a~~~a~~~~~~fl~~hl~~~  269 (271)
                        +..+++.+++++|+++|+++++++|+|..|+|.. .....-.++.+.+.+.+..|...+.+..
T Consensus       297 --~l~d~~~~~~~~L~~aGv~~~l~v~~G~~HgF~~-~~~~~~p~~~~~~~r~~~~f~~~~~~~~  358 (358)
T d1jkma_         297 --PLRDEGIAFARRLARAGVDVAARVNIGLVHGADV-IFRHWLPAALESTVRDVAGFAADRARLR  358 (358)
T ss_dssp             --TTHHHHHHHHHHHHHTTCCEEEEEETTCCTTHHH-HSGGGCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             --CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHH-CCCCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             --4037899999999976997899996787601221-0000181899999999999999731359