27/01/2012 13:25:18 : INFO  : Run start: Fri Jan 27 13:25:17 GMT 2012
27/01/2012 13:25:24 : INFO  : Initialised job
27/01/2012 13:25:26 : INFO  : Renaming log file 'phyre2_20120127_132517.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/096077890b650219/phyre_20120127_132517.log'
27/01/2012 13:25:28 : INFO  : Initialised job:
Sequence
>batch____
METNIVEVENFVQQSEERRGSAFTQEVKRYLERYPNTQYVDVLLTDLNGCFRGKRIPVSS
LKKLEKGCYFPASVFAMDILGNVVEEAGLGQEMGEPDRTCVPVLGSLTPSAADPEFIGQM
LLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVELEFYLLDRQRDAEGYLQPPCA
PGTDDRNTQSQVYSVDNLNHFADVLNDIDELAQLQLIPADGAVAEASPGQFEINLYHTDN
VLEACDDALALKRLVRLMAEKHKMHATFMAKPYEEHAGSGMHIHISMQNNRGENVLSDAE
GEDSPLLKKMLAGMIDLMPSSMALLAPNVNSYRRFQPGMYVPTQASWGHNNRTVALRIPC
GDRHNHRVEYRVAGADANPYLVMAAIFAGILHGLDNELPLQEEVEGNGLEQEGLPFPIRQ
SDALGEFIENDHLRRYLGERFCHVYHACKNDELLQFERLITETEIEWMLKNA

27/01/2012 13:25:30 : INFO  : Checked sequence
27/01/2012 13:25:34 : INFO  : Finding homologues with PSI-BLAST
27/01/2012 13:25:36 : INFO  : PSI-BLAST 3 iterations
27/01/2012 13:27:52 : INFO  : PSI-BLAST 5 iterations
27/01/2012 13:30:05 : INFO  : Finished PSI-BLAST
27/01/2012 13:30:07 : INFO  : Running Buildali to generate a3m file
27/01/2012 13:39:26 : INFO  : Converting to HMM
27/01/2012 13:39:30 : INFO  : Calibrating HMM
27/01/2012 13:39:50 : INFO  : Searching HMM database
27/01/2012 13:50:30 : INFO  : Finished buildali
27/01/2012 13:50:32 : INFO  : Predicting secondary structure
27/01/2012 13:50:41 : INFO  : Predicted secondary structure (PSI-Pred)
27/01/2012 13:50:42 : INFO  : Predicting Disordered regions
27/01/2012 13:50:47 : INFO  : Predicted Disorder (Disopred)
27/01/2012 13:50:48 : INFO  : Running memsat_svm check
27/01/2012 13:54:01 : INFO  : Globular protein
27/01/2012 13:54:03 : INFO  : Predicted Transmembrane (memsat_svm) ID '096077890b650219'
27/01/2012 13:54:05 : INFO  : Initialising fold library search
27/01/2012 13:54:09 : INFO  : Initialised search input
27/01/2012 13:54:11 : INFO  : Building Ensemble models
27/01/2012 13:54:16 : INFO  : Building hh.c1fpyE_.model.1.pdb
27/01/2012 13:54:34 : INFO  : Building hh.c3ng0A_.model.2.pdb
27/01/2012 13:54:47 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/096077890b650219/hh.c3ng0A_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/096077890b650219/c3ng0A_.2.pdb
27/01/2012 13:54:52 : INFO  : Building hh.c1htoB_.model.3.pdb
27/01/2012 13:55:08 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/096077890b650219/hh.c1htoB_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/096077890b650219/c1htoB_.3.pdb
27/01/2012 13:55:13 : INFO  : Building hh.c2j9iL_.model.4.pdb
27/01/2012 13:55:28 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/096077890b650219/hh.c2j9iL_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/096077890b650219/c2j9iL_.4.pdb
27/01/2012 13:55:33 : INFO  : Building hh.d1f52a2.model.5.pdb
27/01/2012 13:55:49 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/096077890b650219/hh.d1f52a2.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/096077890b650219/d1f52a2.5.pdb
27/01/2012 13:55:54 : INFO  : Building hh.d2bvca2.model.6.pdb
27/01/2012 13:56:09 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/096077890b650219/hh.d2bvca2.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/096077890b650219/d2bvca2.6.pdb
27/01/2012 13:56:14 : INFO  : Building c1fpyE_.1.pdb
27/01/2012 13:56:32 : INFO  : Building c3ng0A_.2.pdb
27/01/2012 13:56:47 : INFO  : Building c1htoB_.3.pdb
27/01/2012 13:57:06 : INFO  : Building c2j9iL_.4.pdb
27/01/2012 13:57:22 : INFO  : Building d1f52a2.5.pdb
27/01/2012 13:57:40 : INFO  : Building d2bvca2.6.pdb
27/01/2012 13:57:55 : INFO  : Building c2qc8J_.7.pdb
27/01/2012 13:58:10 : INFO  : Building c2d3aJ_.8.pdb
27/01/2012 13:58:26 : INFO  : Building c3fkyD_.9.pdb
27/01/2012 13:58:42 : INFO  : Building c3o6xC_.10.pdb
27/01/2012 13:58:57 : INFO  : Building d1f52a1.11.pdb
27/01/2012 13:59:11 : INFO  : Building d2bvca1.12.pdb
27/01/2012 13:59:28 : INFO  : Building c1tt4B_.13.pdb
27/01/2012 13:59:44 : INFO  : Building d1tt4a_.14.pdb
27/01/2012 14:00:02 : INFO  : Building d1r8ga_.15.pdb
27/01/2012 14:00:18 : INFO  : Building c2gwcE_.16.pdb
27/01/2012 14:00:35 : INFO  : Building d1u8sa2.17.pdb
27/01/2012 14:00:51 : INFO  : Building c2jy5A_.18.pdb
27/01/2012 14:01:07 : INFO  : Building d1owxa_.19.pdb
27/01/2012 14:01:22 : INFO  : Building d1nxia_.20.pdb
27/01/2012 14:03:15 : INFO  : Finished HH model building
27/01/2012 14:03:16 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
27/01/2012 14:04:16 : INFO  : html domain output complete ID '096077890b650219'
27/01/2012 16:21:03 : INFO  : Run end  : Fri Jan 27 16:21:01 GMT 2012
