Phyre 2 alignment of Q5H777 with c2vxeA_

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Job Description | Q5H777
Confidence | 10.44% | Date | Wed Jan 25 15:21:15 GMT 2012
Rank | 24 | Aligned Residues | 29
% Identity | 17% | Template | c2vxeA_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:cg10686-pa; | PDBTitle: solution structure of the lsm domain of drosophila2 melanogaster tral (trailer hitch)
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | W | G | H | N | N | R | T | V | A | L | R | I | P | C | G | D | R | H | N | H | R | V | E | Y | R | V | A | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | F | G | T | E | D | R | D | T | Q | F | Q | I | A | P | Q | S | Q | I | Y | D | Y | I | L | F | R | G | S | D
Template Known Secondary structure |  |  |  |  |  | T | T | T |  |  | S | S |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  | T | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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