125 d1vyra_ Probab=95.42   E-value=0.25  Score=29.22  Aligned_columns=124  Identities=17%

Q ss_pred             HHHHHHHHCCCCEEEECCC-----------CCCCCCCCCCCCHH-------HHHHHHHHHHHCCCEEEEECCCCCCHHH-
Q ss_conf             9999999749979997674-----------55864466688999-------9999999999879889997076468889-
Q batch____        14 KNMRYAFAYGADAVYAGQP-----------RYSLRVRNNEFNHE-------NLQLGINEAHALGKKFYVVVNIAPHNAK-   74 (453)
Q Consensus        14 e~l~aAi~~GADaVY~G~~-----------~f~~R~~a~nfs~e-------el~e~v~~ah~~g~kvyvtlN~i~~~~e-   74 (453)
                      ++++-|.++|.|.|.+-..           .+|.|.-...=|+|       |+-++|.-+-.... |-+.++..-...+ 
T Consensus       164 ~aA~rA~~aGfDgVeih~ahgyLl~qFlSp~~N~RtD~YGGS~enR~Rf~~Eii~aIr~~~g~~~-i~~ris~~~~~~~~  242 (363)
T d1vyra_         164 QAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADR-IGIRVSPIGTFQNV  242 (363)
T ss_dssp             HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGG-EEEEECCSSCBTTB
T ss_pred             HHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC-EEEEEECCCCCCCC
T ss_conf             99999997399899986476046764126656857576488888978899999999998638563-12111024444766


Q ss_pred             ------HHHHHHHHHHHHHCCCCEEEEC----------CHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCC-CCE
Q ss_conf             ------9999999999985799899984----------98999999985899819995560117699998999879-989
Q batch____        75 ------LKTFIRDLKPVVEMGPDALIMS----------DPGLIMLVREHFPEMPIHLSVQANAVNWATVKFWQQMG-LTR  137 (453)
Q Consensus        75 ------l~~~~~~l~~L~~~gvDaiIV~----------D~G~i~l~ke~~p~l~ih~stq~nv~N~~s~~f~~~~G-~~R  137 (453)
                            ++...++++.|.+.|+|.|-|+          +..+...+|+.. +.+|.++.   +.+.+.++-.-+.| ++-
T Consensus       243 ~~~g~~~ee~~~la~~l~~~Gvd~i~vs~g~~~~~~~~~~~~~~~ik~~~-~~pVi~~G---~~t~e~ae~~L~~g~~D~  318 (363)
T d1vyra_         243 DNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERF-HGVIIGAG---AYTAEKAEDLIGKGLIDA  318 (363)
T ss_dssp             CCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHC-CSEEEEES---SCCHHHHHHHHHTTSCSE
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHH-CCCEEECC---CCCHHHHHHHHHCCCCCE
T ss_conf             67899999999999999864985999205886678665589999989870-98599868---789999999997899879


Q ss_pred             EEECC
Q ss_conf             89873
Q batch____       138 VILSR  142 (453)
Q Consensus       138 VvLsr  142 (453)
                      |.++|
T Consensus       319 V~~gR  323 (363)
T d1vyra_         319 VAFGR  323 (363)
T ss_dssp             EEESH
T ss_pred             EEECC
T ss_conf             99844