346 d1juba_ Probab=87.73   E-value=2.1  Score=22.31  Aligned_columns=125  Identities=13%

Q ss_pred             HHHHHHHHHCC-CCEEEECCCCCCCCCCCC-CCCHHHHHHHHHHHHHC-CCEEEEECCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf             99999999749-979997674558644666-88999999999999987-9889997076468889999999999998579
Q batch____        13 LKNMRYAFAYG-ADAVYAGQPRYSLRVRNN-EFNHENLQLGINEAHAL-GKKFYVVVNIAPHNAKLKTFIRDLKPVVEMG   89 (453)
Q Consensus        13 le~l~aAi~~G-ADaVY~G~~~f~~R~~a~-nfs~eel~e~v~~ah~~-g~kvyvtlN~i~~~~el~~~~~~l~~L~~~g   89 (453)
                      ...++.+.++| ||++=+....++.-.... ..+.+.+.+.++..... ...+.+.+..........   +..+.+.+.|
T Consensus       109 ~~~~~~~~~~~~a~~i~in~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~~k~~~~~~~~~~~---~~a~~~~~~G  185 (311)
T d1juba_         109 IAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYFDLVHFD---IMAEILNQFP  185 (311)
T ss_dssp             HHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCCSHHHHH---HHHHHHTTSC
T ss_pred             HHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHH---HHHHHHHHCC
T ss_conf             9999876523589877337866554320032049899999999999722894110104777640029---9998887379


Q ss_pred             CCEEEECCHH------------------------------------HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHC
Q ss_conf             9899984989------------------------------------9999998589981999556011769999899987
Q batch____        90 PDALIMSDPG------------------------------------LIMLVREHFPEMPIHLSVQANAVNWATVKFWQQM  133 (453)
Q Consensus        90 vDaiIV~D~G------------------------------------~i~l~ke~~p~l~ih~stq~nv~N~~s~~f~~~~  133 (453)
                      +|+|.+.+-+                                    +..+.+...+++||.++-.  |.|...+.-+..+
T Consensus       186 ~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~a~~~~~~~~~~~~~~ipii~~GG--I~~~~dv~k~l~l  263 (311)
T d1juba_         186 LTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGG--IETGQDAFEHLLC  263 (311)
T ss_dssp             CCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESS--CCSHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCCEECCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECC--CCCHHHHHHHHHC
T ss_conf             86999708865321022321000013344456646411046899999998885078966999478--7999999999972


Q ss_pred             CCCEEEECC
Q ss_conf             998989873
Q batch____       134 GLTRVILSR  142 (453)
Q Consensus       134 G~~RVvLsr  142 (453)
                      |++-|-+.+
T Consensus       264 GAdaV~igt  272 (311)
T d1juba_         264 GATMLQIGT  272 (311)
T ss_dssp             TCSEEEECH
T ss_pred             CCCEEEECH
T ss_conf             998999927