388 c3atyA_ Probab=83.12   E-value=3.4  Score=20.77  Aligned_columns=124  Identities=11%

Q ss_pred             HHHHHHH-HCCCCEEEECC-----------CCCCCCCCC--CCCCHH-------HHHHHHHHHHHCCCEEEEEC------
Q ss_conf             9999999-74997999767-----------455864466--688999-------99999999998798899970------
Q batch____        14 KNMRYAF-AYGADAVYAGQ-----------PRYSLRVRN--NEFNHE-------NLQLGINEAHALGKKFYVVV------   66 (453)
Q Consensus        14 e~l~aAi-~~GADaVY~G~-----------~~f~~R~~a--~nfs~e-------el~e~v~~ah~~g~kvyvtl------   66 (453)
                      ++++-|+ ++|+|.|-+-+           +.+|.|.-.  +.=|+|       |+-++|..+-.... |.+.+      
T Consensus       178 ~AA~rA~~~AGfDgVEIh~ahGYLl~qFlSp~~N~RtD~e~yGGs~eNR~Rf~~Eii~aIr~~vg~d~-v~~Rls~~d~~  256 (379)
T c3atyA_         178 EGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDR-VGLRISPLNGV  256 (379)
T ss_dssp             HHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGG-EEEEECTTCCG
T ss_pred             HHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCE-EEEEECCCCCC
T ss_conf             99999998549988998526602576414843354658887888988999999999999998759862-99996301255


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCEEEECCH--------HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCC-CCE
Q ss_conf             76468889999999999998579989998498--------999999985899819995560117699998999879-989
Q batch____        67 NIAPHNAKLKTFIRDLKPVVEMGPDALIMSDP--------GLIMLVREHFPEMPIHLSVQANAVNWATVKFWQQMG-LTR  137 (453)
Q Consensus        67 N~i~~~~el~~~~~~l~~L~~~gvDaiIV~D~--------G~i~l~ke~~p~l~ih~stq~nv~N~~s~~f~~~~G-~~R  137 (453)
                      +.....++.+....+++.|.+.|+|.+-|+..        -....+|+.. ..++...   .+++.+.++..-+.| ++-
T Consensus       257 ~g~~~~~~~~~~~~l~~~le~~gvd~l~vs~g~~~~~~~~~~~~~~r~~~-~~~~i~~---g~~~~e~ae~~l~~G~~D~  332 (379)
T c3atyA_         257 HGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGDVVAWVRGSY-SGVKISN---LRYDFEEADQQIREGKVDA  332 (379)
T ss_dssp             GGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCCHHHHHHTTC-CSCEEEE---SSCCHHHHHHHHHTTSCSE
T ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHC-CCEEEEC---CCCCHHHHHHHHHCCCCCE
T ss_conf             88888885899999999887629888991189888731001899997407-9649981---5789999999998899769


Q ss_pred             EEECC
Q ss_conf             89873
Q batch____       138 VILSR  142 (453)
Q Consensus       138 VvLsr  142 (453)
                      |.++|
T Consensus       333 V~~gR  337 (379)
T c3atyA_         333 VAFGA  337 (379)
T ss_dssp             EEESH
T ss_pred             EEECC
T ss_conf             99830